Your job contains 1 sequence.
>psy4094
MEDILTPPDTPENTKSSRKSVKYSTLPGASSLAVISNEKTNLKFGSVFSLSSQSDQSEKS
PRKTSISSPEEKQKRRRFSFLSDKTEKLARKLSISSEKLDKKSAKQSTEKVNEKPVKKSS
IEQVNERGVDVEFSTSAPLESTTSKKSPLKFKLLKKLSFSKKPKTKEKPVKKSSIEQVNE
RGVDVEFSTSAPLESTTSKKSPLKFKLLKKLSFSKKPKTKEESSEDTMDGKNGGKSKKKG
GKTKFKKIVPVEPSALASPNTIPDTPPTPQNSKVFLEKEREVKEREGEQQEGGSVTSSPS
ITPTPPTQSDTSLLSTPAQSQDLDSATDNDETYDTPMGTSPNSSVMNQAPGDSDQDLDVT
LKENTELPSAAAAASDVKSPSDLKKEILSITTPIVTEAGRKKHNEPKPFTSPNSSSNGEK
ETAASPNTSVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVH
QFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFD
VTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHN
FSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKNGRN
CAC
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4094
(663 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0002567 - symbol:ltd "lightoid" species:7227 "Dros... 788 2.3e-78 1
UNIPROTKB|Q13637 - symbol:RAB32 "Ras-related protein Rab-... 735 9.6e-73 1
UNIPROTKB|F1S747 - symbol:RAB32 "Ras-related protein Rab-... 727 6.7e-72 1
UNIPROTKB|E1BA60 - symbol:RAB32 "Uncharacterized protein"... 726 8.6e-72 1
UNIPROTKB|F1NBL3 - symbol:RAB32 "Uncharacterized protein"... 724 1.4e-71 1
MGI|MGI:1915094 - symbol:Rab32 "RAB32, member RAS oncogen... 723 1.8e-71 1
UNIPROTKB|Q06AU5 - symbol:RAB32 "Ras-related protein Rab-... 721 2.9e-71 1
ZFIN|ZDB-GENE-031006-10 - symbol:rab32a "RAB32a, member R... 714 1.6e-70 1
UNIPROTKB|F1PSK7 - symbol:RAB38 "Uncharacterized protein"... 709 5.5e-70 1
UNIPROTKB|Q63483 - symbol:Rab38 "Protein Rab38" species:1... 709 5.5e-70 1
UNIPROTKB|E1C752 - symbol:RAB38 "Uncharacterized protein"... 708 7.0e-70 1
MGI|MGI:1919683 - symbol:Rab38 "RAB38, member of RAS onco... 708 7.0e-70 1
RGD|1559997 - symbol:Rab32 "RAB32, member RAS oncogene fa... 708 7.0e-70 1
UNIPROTKB|F1STR2 - symbol:RAB38 "Uncharacterized protein"... 706 1.1e-69 1
UNIPROTKB|P57729 - symbol:RAB38 "Ras-related protein Rab-... 704 1.8e-69 1
UNIPROTKB|E1B9C0 - symbol:RAB38 "Uncharacterized protein"... 695 1.7e-68 1
ZFIN|ZDB-GENE-091118-91 - symbol:si:ch73-173m3.3 "si:ch73... 687 1.2e-67 1
ZFIN|ZDB-GENE-070424-24 - symbol:zgc:162171 "zgc:162171" ... 672 4.5e-66 1
ZFIN|ZDB-GENE-090821-8 - symbol:rab38a "RAB38a, member RA... 655 2.9e-64 1
ZFIN|ZDB-GENE-091204-345 - symbol:rab38b "RAB38b, member ... 641 8.8e-63 1
DICTYBASE|DDB_G0283603 - symbol:rab32A "Rab GTPase" speci... 639 1.4e-62 1
UNIPROTKB|I3LHE8 - symbol:RAB7L1 "Uncharacterized protein... 543 2.1e-52 1
UNIPROTKB|A5PJV4 - symbol:RAB7L1 "RAB7L1 protein" species... 541 3.5e-52 1
UNIPROTKB|O14966 - symbol:RAB7L1 "Ras-related protein Rab... 538 7.2e-52 1
UNIPROTKB|F1P9G2 - symbol:RAB7L1 "Uncharacterized protein... 535 1.5e-51 1
UNIPROTKB|F1N9R7 - symbol:RAB7L1 "Uncharacterized protein... 529 6.5e-51 1
MGI|MGI:2385107 - symbol:Rab7l1 "RAB7, member RAS oncogen... 529 6.5e-51 1
RGD|620892 - symbol:Rab7l1 "RAB7, member RAS oncogene fam... 529 6.5e-51 1
DICTYBASE|DDB_G0269416 - symbol:rab32B "Rab GTPase" speci... 512 4.1e-49 1
ZFIN|ZDB-GENE-090821-4 - symbol:rab32b "RAB32b, member RA... 473 5.6e-45 1
WB|WBGene00011083 - symbol:glo-1 species:6239 "Caenorhabd... 471 9.1e-45 1
UNIPROTKB|J9P9M0 - symbol:RAB32 "Uncharacterized protein"... 467 2.4e-44 1
UNIPROTKB|H0YDB7 - symbol:RAB38 "Ras-related protein Rab-... 433 9.6e-41 1
DICTYBASE|DDB_G0275675 - symbol:rab32C "Rab GTPase" speci... 399 3.9e-37 1
ZFIN|ZDB-GENE-040718-304 - symbol:rab10 "RAB10, member RA... 325 6.9e-29 1
UNIPROTKB|P22127 - symbol:P22127 "Ras-related protein Rab... 321 1.9e-28 1
ZFIN|ZDB-GENE-040704-16 - symbol:zgc:91909 "zgc:91909" sp... 319 3.3e-28 1
FB|FBgn0015789 - symbol:Rab10 "Rab10" species:7227 "Droso... 317 5.5e-28 1
UNIPROTKB|J9NUV0 - symbol:RAB10 "Ras-related protein Rab-... 317 5.5e-28 1
UNIPROTKB|I3L5L9 - symbol:RAB13 "Uncharacterized protein"... 317 5.5e-28 1
UNIPROTKB|O97572 - symbol:RAB7A "Ras-related protein Rab-... 317 5.5e-28 1
TAIR|locus:2041036 - symbol:ARA4 species:3702 "Arabidopsi... 317 5.5e-28 1
UNIPROTKB|P20337 - symbol:RAB3B "Ras-related protein Rab-... 316 7.1e-28 1
UNIPROTKB|Q5ZIT5 - symbol:RAB10 "Ras-related protein Rab-... 315 9.2e-28 1
UNIPROTKB|Q3T0F5 - symbol:RAB7A "Ras-related protein Rab-... 315 9.2e-28 1
MGI|MGI:1917158 - symbol:Rab3b "RAB3B, member RAS oncogen... 314 1.2e-27 1
UNIPROTKB|A6QLS9 - symbol:RAB10 "RAB10 protein" species:9... 313 1.5e-27 1
UNIPROTKB|F2Z4P9 - symbol:RAB10 "Ras-related protein Rab-... 313 1.5e-27 1
UNIPROTKB|P61026 - symbol:RAB10 "Ras-related protein Rab-... 313 1.5e-27 1
UNIPROTKB|F2Z5F2 - symbol:RAB10 "Uncharacterized protein"... 313 1.5e-27 1
UNIPROTKB|Q5R5U1 - symbol:RAB10 "Ras-related protein Rab-... 313 1.5e-27 1
MGI|MGI:105066 - symbol:Rab10 "RAB10, member RAS oncogene... 313 1.5e-27 1
POMBASE|SPBC405.04c - symbol:ypt7 "GTPase Ypt7" species:4... 313 1.5e-27 1
UNIPROTKB|P18067 - symbol:RAB7A "Ras-related protein Rab-... 312 2.0e-27 1
UNIPROTKB|P24409 - symbol:RAB10 "Ras-related protein Rab-... 312 2.0e-27 1
UNIPROTKB|P51149 - symbol:RAB7A "Ras-related protein Rab-... 312 2.0e-27 1
UNIPROTKB|Q5R9Y4 - symbol:RAB7A "Ras-related protein Rab-... 312 2.0e-27 1
MGI|MGI:105068 - symbol:Rab7 "RAB7, member RAS oncogene f... 312 2.0e-27 1
RGD|61908 - symbol:Rab7a "RAB7A, member RAS oncogene fami... 312 2.0e-27 1
ZFIN|ZDB-GENE-040426-1352 - symbol:rab7 "RAB7, member RAS... 312 2.0e-27 1
UNIPROTKB|F1NMT5 - symbol:RAB10 "Ras-related protein Rab-... 311 2.6e-27 1
UNIPROTKB|F1MJQ1 - symbol:RAB7A "Ras-related protein Rab-... 311 2.6e-27 1
UNIPROTKB|F1PWY4 - symbol:RAB3B "Uncharacterized protein"... 311 2.6e-27 1
SGD|S000001856 - symbol:YPT1 "Rab family GTPase" species:... 311 2.6e-27 1
UNIPROTKB|P10948 - symbol:RAB3B "Ras-related protein Rab-... 310 3.3e-27 1
RGD|620922 - symbol:Rab3b "RAB3B, member RAS oncogene fam... 310 3.3e-27 1
RGD|620880 - symbol:Rab13 "RAB13, member RAS oncogene fam... 309 4.3e-27 1
UNIPROTKB|F1NVC7 - symbol:LOC771782 "Uncharacterized prot... 308 5.5e-27 1
UNIPROTKB|P20336 - symbol:RAB3A "Ras-related protein Rab-... 308 5.5e-27 1
UNIPROTKB|F1RFW5 - symbol:RAB13 "Uncharacterized protein"... 308 5.5e-27 1
CGD|CAL0001430 - symbol:YPT1 species:5476 "Candida albica... 307 7.1e-27 1
UNIPROTKB|E1C0F3 - symbol:RAB7A "Uncharacterized protein"... 307 7.1e-27 1
UNIPROTKB|F1NI30 - symbol:RAB10 "Ras-related protein Rab-... 307 7.1e-27 1
UNIPROTKB|P11023 - symbol:RAB3A "Ras-related protein Rab-... 307 7.1e-27 1
UNIPROTKB|E2RIA5 - symbol:RAB3A "Uncharacterized protein"... 307 7.1e-27 1
UNIPROTKB|F1S6G3 - symbol:RAB3B "Uncharacterized protein"... 307 7.1e-27 1
UNIPROTKB|Q06AU3 - symbol:RAB3A "Ras-related protein Rab-... 307 7.1e-27 1
UNIPROTKB|Q5AI00 - symbol:YPT1 "Likely RAB family GTP bin... 307 7.1e-27 1
MGI|MGI:97843 - symbol:Rab3a "RAB3A, member RAS oncogene ... 307 7.1e-27 1
RGD|3528 - symbol:Rab3a "RAB3A, member RAS oncogene famil... 307 7.1e-27 1
UNIPROTKB|Q5KTJ6 - symbol:RAB13 "Ras-related protein Rab-... 306 9.3e-27 1
TAIR|locus:2086290 - symbol:RABA1g "RAB GTPase homolog A1... 306 9.3e-27 1
ZFIN|ZDB-GENE-030826-30 - symbol:rab13 "RAB13, member RAS... 306 9.3e-27 1
UNIPROTKB|Q08DE8 - symbol:RAB7B "Ras-related protein Rab-... 305 1.2e-26 1
ZFIN|ZDB-GENE-041210-268 - symbol:rab3ab "RAB3A, member R... 305 1.2e-26 1
UNIPROTKB|Q95UJ0 - symbol:Rab7a "Ras-related protein Rab-... 304 1.5e-26 1
UNIPROTKB|P51153 - symbol:RAB13 "Ras-related protein Rab-... 303 2.0e-26 1
UNIPROTKB|F1PTE3 - symbol:RAB13 "Uncharacterized protein"... 302 2.6e-26 1
RGD|620879 - symbol:Rab10 "RAB10, member RAS oncogene fam... 302 2.6e-26 1
ZFIN|ZDB-GENE-040927-2 - symbol:zgc:100918 "zgc:100918" s... 302 2.6e-26 1
UNIPROTKB|Q58DS5 - symbol:RAB13 "Ras-related protein Rab-... 301 3.3e-26 1
UNIPROTKB|Q96E17 - symbol:RAB3C "Ras-related protein Rab-... 301 3.3e-26 1
UNIPROTKB|Q6DUB4 - symbol:Rab7b "Ras-related protein Rab-... 300 4.3e-26 1
MGI|MGI:1927232 - symbol:Rab13 "RAB13, member RAS oncogen... 300 4.3e-26 1
RGD|1562617 - symbol:Rab7b "Rab7b, member RAS oncogene fa... 300 4.3e-26 1
ZFIN|ZDB-GENE-040801-62 - symbol:rab35 "RAB35, member RAS... 300 4.3e-26 1
WB|WBGene00004273 - symbol:rab-10 species:6239 "Caenorhab... 299 5.5e-26 1
ZFIN|ZDB-GENE-040801-2 - symbol:rab3aa "RAB3A, member RAS... 299 5.5e-26 1
MGI|MGI:2442295 - symbol:5430435G22Rik "RIKEN cDNA 543043... 298 7.2e-26 1
UNIPROTKB|Q6P9W6 - symbol:Rab3b "Ras-related protein Rab-... 298 7.2e-26 1
WARNING: Descriptions of 1351 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0002567 [details] [associations]
symbol:ltd "lightoid" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0007611 "learning or
memory" evidence=IMP] [GO:0008355 "olfactory learning"
evidence=IMP] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0008057 "eye
pigment granule organization" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 EMBL:AE013599
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0008355
GO:GO:0015031 GO:GO:0003924 GO:GO:0008057 GO:GO:0006727
GO:GO:0006856 KO:K07918 GeneTree:ENSGT00700000104228
UniGene:Dm.2179 GeneID:35940 KEGG:dme:Dmel_CG8024 CTD:35940
FlyBase:FBgn0002567 ChiTaRS:ltd GenomeRNAi:35940 NextBio:795956
RefSeq:NP_525109.1 ProteinModelPortal:A1Z7S3 SMR:A1Z7S3
STRING:A1Z7S3 PRIDE:A1Z7S3 EnsemblMetazoa:FBtr0089931
UCSC:CG8024-RB InParanoid:A1Z7S3 OMA:DTPPRER PhylomeDB:A1Z7S3
Bgee:A1Z7S3 Uniprot:A1Z7S3
Length = 686
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 156/252 (61%), Positives = 184/252 (73%)
Query: 416 SNGEKETAASPNTSVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSII 475
S + +T N + +T E + + DKRE LYKILVIGELG GKTS I
Sbjct: 441 SEEQADTTEPENAKPMPAFGDLTMDQEMEPAIMTSTSDKREHLYKILVIGELGTGKTSFI 500
Query: 476 KRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGA 535
KRYVHQFFS +YRATIGVDFALKVL WD TI+RLQLWDIAGQERFGNMTRVYYKEAVGA
Sbjct: 501 KRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIAGQERFGNMTRVYYKEAVGA 560
Query: 536 FIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEF 595
FIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+LLANKCDQ K+GI P K+DE+
Sbjct: 561 FIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLANKCDQEKQGIITQPEKMDEY 620
Query: 596 IKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV----QANGDSHATSEAVFSLNRN 651
++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+ A+GD S A +
Sbjct: 621 VRENGFAGWFETSAKENINIDEAARALVNKILINDKLISADLADGDKFNLSAA----DAT 676
Query: 652 SQETKNGRNCAC 663
+ KN C+C
Sbjct: 677 GSDAKN--KCSC 686
>UNIPROTKB|Q13637 [details] [associations]
symbol:RAB32 "Ras-related protein Rab-32" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0090382 "phagosome maturation" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 EMBL:U71127 EMBL:AF498958 EMBL:BT020016
EMBL:AL133539 EMBL:BC015061 EMBL:U59878 IPI:IPI00014377
RefSeq:NP_006825.1 UniGene:Hs.287714 ProteinModelPortal:Q13637
SMR:Q13637 STRING:Q13637 PhosphoSite:Q13637 DMDM:2833245
PaxDb:Q13637 PRIDE:Q13637 DNASU:10981 Ensembl:ENST00000367495
GeneID:10981 KEGG:hsa:10981 UCSC:uc003qln.1 CTD:10981
GeneCards:GC06P146906 HGNC:HGNC:9772 HPA:HPA025731 MIM:612906
neXtProt:NX_Q13637 PharmGKB:PA34123 InParanoid:Q13637 KO:K07918
OMA:FCREGGF OrthoDB:EOG4F7NM0 PhylomeDB:Q13637 GenomeRNAi:10981
NextBio:41722 Bgee:Q13637 CleanEx:HS_RAB32 Genevestigator:Q13637
GermOnline:ENSG00000118508 Uniprot:Q13637
Length = 225
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 137/210 (65%), Positives = 171/210 (81%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP
Sbjct: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLLANKCDQ K+ + +P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 139 VLLANKCDQNKDS-SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197
Query: 632 VQANGDSHATSEAVFSLNRNSQETKNGRNC 661
N ++ L++ + +N C
Sbjct: 198 SFPNEENDVDK---IKLDQETLRAENKSQC 224
>UNIPROTKB|F1S747 [details] [associations]
symbol:RAB32 "Ras-related protein Rab-32" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 OMA:FCREGGF GeneTree:ENSGT00700000104228
EMBL:CU856012 Ensembl:ENSSSCT00000004552 Uniprot:F1S747
Length = 226
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 133/178 (74%), Positives = 156/178 (87%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 21 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 80
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGA +VFD++R +TF+AVLKWK DLD+KV LP+G+PIP
Sbjct: 81 LWDIAGQERFGNMTRVYYKEAVGALVVFDISRGSTFEAVLKWKNDLDSKVHLPNGSPIPA 140
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
VLLANKCDQ K+ NP+++D+F KEH F+GWFETSAKDNINID+AA+ LV+ IL N
Sbjct: 141 VLLANKCDQKKDS-GQNPSQMDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILAN 197
>UNIPROTKB|E1BA60 [details] [associations]
symbol:RAB32 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 CTD:10981 KO:K07918 OMA:FCREGGF
GeneTree:ENSGT00700000104228 EMBL:DAAA02026958 EMBL:DAAA02026959
EMBL:DAAA02026960 IPI:IPI00692503 RefSeq:NP_001192879.1
UniGene:Bt.15549 Ensembl:ENSBTAT00000012905 GeneID:528099
KEGG:bta:528099 NextBio:20874738 Uniprot:E1BA60
Length = 225
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 134/187 (71%), Positives = 159/187 (85%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ E L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 20 PETSEHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 79
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGAFIVFD++R +TFDAVLKWK DLD+KV LP+G+PIP
Sbjct: 80 LWDIAGQERFGNMTRVYYKEAVGAFIVFDISRGSTFDAVLKWKSDLDSKVHLPNGSPIPA 139
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLLANKCDQ K+ P+++D+F KEH F+GWFETSAKDN+NID+AA+ LV+ IL N +
Sbjct: 140 VLLANKCDQKKDS-GQTPSQMDQFCKEHGFTGWFETSAKDNVNIDEAARFLVENILANHQ 198
Query: 632 VQANGDS 638
N ++
Sbjct: 199 SFPNEEN 205
>UNIPROTKB|F1NBL3 [details] [associations]
symbol:RAB32 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 OMA:FCREGGF GeneTree:ENSGT00700000104228
EMBL:AADN02025319 IPI:IPI00586938 ProteinModelPortal:F1NBL3
Ensembl:ENSGALT00000020101 Uniprot:F1NBL3
Length = 227
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 138/206 (66%), Positives = 167/206 (81%)
Query: 433 GKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIG 492
G+ S+ G P S + + RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIG
Sbjct: 6 GRASMAGGEG----PVSGVAESREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIG 61
Query: 493 VDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLK 552
VDFALKV++WD +T++RLQLWDIAGQERFGNMTRVYYKEAVGAF+VFDVTR +TF+AV K
Sbjct: 62 VDFALKVINWDSKTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSK 121
Query: 553 WKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDN 612
WK DLD+KV LP+G+PIP VLLANKCDQ K+G + N +++D+F +E F GWFETSAKDN
Sbjct: 122 WKHDLDSKVLLPNGSPIPAVLLANKCDQKKDG-SQNLSQMDQFCREGGFIGWFETSAKDN 180
Query: 613 INIDDAAKTLVQKILENDKVQANGDS 638
INID+AA+ LV+ IL N K N ++
Sbjct: 181 INIDEAARFLVENILANYKTFPNEEN 206
>MGI|MGI:1915094 [details] [associations]
symbol:Rab32 "RAB32, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0045335 "phagocytic vesicle" evidence=ISO]
[GO:0090382 "phagosome maturation" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1915094 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:10981
KO:K07918 OMA:FCREGGF OrthoDB:EOG4F7NM0 EMBL:AY135650 EMBL:AK012701
EMBL:AK078874 EMBL:AK088661 EMBL:AK151543 EMBL:AK159102
EMBL:AK163620 EMBL:BC016409 EMBL:BC055945 IPI:IPI00112587
RefSeq:NP_080681.1 UniGene:Mm.31486 ProteinModelPortal:Q9CZE3
SMR:Q9CZE3 STRING:Q9CZE3 PhosphoSite:Q9CZE3 PaxDb:Q9CZE3
PRIDE:Q9CZE3 Ensembl:ENSMUST00000019974 GeneID:67844 KEGG:mmu:67844
GeneTree:ENSGT00700000104228 InParanoid:Q9CZE3 NextBio:325691
Bgee:Q9CZE3 CleanEx:MM_RAB32 Genevestigator:Q9CZE3
GermOnline:ENSMUSG00000019832 Uniprot:Q9CZE3
Length = 223
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 131/192 (68%), Positives = 164/192 (85%)
Query: 440 GSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKV 499
G ++ + + P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV
Sbjct: 5 GLGQQGASATAAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKV 64
Query: 500 LSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDA 559
L+WD T++RLQLWDIAGQERFGNMTRVYYKEA+GAF+VFD++R++TFDAVLKWK DLD+
Sbjct: 65 LNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDS 124
Query: 560 KVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAA 619
KV LP+G+PIP VLLANKCDQ K+ + +P+++D+F K+H F+GWFETSAKDNINID+A
Sbjct: 125 KVHLPNGSPIPAVLLANKCDQKKDN-SQSPSQMDQFCKDHGFTGWFETSAKDNINIDEAT 183
Query: 620 KTLVQKILENDK 631
+ LV+ +L N +
Sbjct: 184 RFLVENMLANQQ 195
>UNIPROTKB|Q06AU5 [details] [associations]
symbol:RAB32 "Ras-related protein Rab-32" species:9823 "Sus
scrofa" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0090382
"phagosome maturation" evidence=ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:10981 KO:K07918
OrthoDB:EOG4F7NM0 EMBL:DQ917630 RefSeq:NP_001116648.1
UniGene:Ssc.56282 ProteinModelPortal:Q06AU5 GeneID:100144496
KEGG:ssc:100144496 Uniprot:Q06AU5
Length = 226
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 132/178 (74%), Positives = 155/178 (87%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 21 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 80
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGA +VFD++R + F+AVLKWK DLD+KV LP+G+PIP
Sbjct: 81 LWDIAGQERFGNMTRVYYKEAVGALVVFDISRGSPFEAVLKWKNDLDSKVHLPNGSPIPA 140
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
VLLANKCDQ K+ NP+++D+F KEH F+GWFETSAKDNINID+AA+ LV+ IL N
Sbjct: 141 VLLANKCDQKKDS-GQNPSQMDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILAN 197
>ZFIN|ZDB-GENE-031006-10 [details] [associations]
symbol:rab32a "RAB32a, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-031006-10 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
KO:K07918 HSSP:P32939 EMBL:BC049531 IPI:IPI00484351
RefSeq:NP_958489.1 UniGene:Dr.119612 ProteinModelPortal:Q7ZW88
STRING:Q7ZW88 GeneID:378969 KEGG:dre:378969 CTD:378969
InParanoid:Q7ZW88 NextBio:20813911 ArrayExpress:Q7ZW88
Uniprot:Q7ZW88
Length = 213
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 136/187 (72%), Positives = 158/187 (84%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E+L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD +T++RLQLWD
Sbjct: 10 KEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSKTLVRLQLWD 69
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAFIVFD+TR +TF+AV KWK DLD KV L +GNPIP VLL
Sbjct: 70 IAGQERFGNMTRVYYKEAVGAFIVFDITRGSTFEAVSKWKHDLDTKVKLANGNPIPSVLL 129
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK--- 631
ANKCDQ K+G +NN + +D F KE F GWFETSAK+NIN+D+AA+ LV+ IL NDK
Sbjct: 130 ANKCDQKKDG-SNNSSLMDNFCKEAGFLGWFETSAKENINVDEAARFLVENILLNDKGLP 188
Query: 632 -VQANGD 637
+ NGD
Sbjct: 189 YEENNGD 195
>UNIPROTKB|F1PSK7 [details] [associations]
symbol:RAB38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 OMA:TKWKNDL EMBL:AAEX03012742
Ensembl:ENSCAFT00000007057 Uniprot:F1PSK7
Length = 229
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 133/191 (69%), Positives = 156/191 (81%)
Query: 440 GSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKV 499
G S P +E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKV
Sbjct: 9 GGSARGRPARMQAPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKV 68
Query: 500 LSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDA 559
L WD ET++RLQLWDIAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+
Sbjct: 69 LHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDS 128
Query: 560 KVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAA 619
K++LP+G P+ VLLANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A+
Sbjct: 129 KLSLPNGKPVSVVLLANKCDQGKDVLINNGLKMDQFCKEHGFVGWFETSAKENINIDEAS 188
Query: 620 KTLVQKILEND 630
+ LV+ IL N+
Sbjct: 189 RCLVKHILANE 199
>UNIPROTKB|Q63483 [details] [associations]
symbol:Rab38 "Protein Rab38" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 EMBL:M94043 RGD:628752 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:CH473956
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104228 CTD:23682 KO:K07923 OMA:TKWKNDL
OrthoDB:EOG49GKHH HSSP:Q26000 EMBL:BC070513 IPI:IPI00209151
RefSeq:NP_665717.1 UniGene:Rn.9824 STRING:Q63483
Ensembl:ENSRNOT00000022538 GeneID:252916 KEGG:rno:252916
InParanoid:Q63483 NextBio:624045 Genevestigator:Q63483
Uniprot:Q63483
Length = 211
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLVNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>UNIPROTKB|E1C752 [details] [associations]
symbol:RAB38 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104228 CTD:23682 KO:K07923
OMA:TKWKNDL EMBL:AADN02004804 IPI:IPI00572853 RefSeq:XP_425653.2
ProteinModelPortal:E1C752 Ensembl:ENSGALT00000027870 GeneID:428095
KEGG:gga:428095 NextBio:20829169 Uniprot:E1C752
Length = 212
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 132/183 (72%), Positives = 160/183 (87%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+++E LYK+LVIG+LG GKTSIIKRYVHQ FSPHYRATIGVDFALKVLSWD ET++RLQL
Sbjct: 5 NQKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLSWDAETVVRLQL 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK+DLD+K+ LP+G P+P V
Sbjct: 65 WDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKEDLDSKLVLPNGKPVPTV 124
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--END 630
LLANKCDQ + + NN K+D+F KE+ F GWFETSAK+NINI++A++ LV+ I+ E+D
Sbjct: 125 LLANKCDQGIDVLMNNGIKMDQFCKENGFVGWFETSAKENININEASRCLVKHIIATESD 184
Query: 631 KVQ 633
VQ
Sbjct: 185 PVQ 187
>MGI|MGI:1919683 [details] [associations]
symbol:Rab38 "RAB38, member of RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006996 "organelle
organization" evidence=ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031982
"vesicle" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0060155 "platelet dense granule organization"
evidence=ISO] [GO:0090383 "phagosome acidification" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1919683
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104228 CTD:23682 KO:K07923 OMA:TKWKNDL
OrthoDB:EOG49GKHH EMBL:AY062237 EMBL:AF448443 EMBL:AF448441
EMBL:AF448442 EMBL:AK009296 EMBL:AK044783 EMBL:AK054253
IPI:IPI00154087 RefSeq:NP_082514.4 UniGene:Mm.276669
ProteinModelPortal:Q8QZZ8 SMR:Q8QZZ8 IntAct:Q8QZZ8 STRING:Q8QZZ8
PhosphoSite:Q8QZZ8 PaxDb:Q8QZZ8 PRIDE:Q8QZZ8
Ensembl:ENSMUST00000107256 GeneID:72433 KEGG:mmu:72433
InParanoid:Q8QZZ8 NextBio:336246 Bgee:Q8QZZ8 CleanEx:MM_RAB38
Genevestigator:Q8QZZ8 GermOnline:ENSMUSG00000030559 Uniprot:Q8QZZ8
Length = 211
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>RGD|1559997 [details] [associations]
symbol:Rab32 "RAB32, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0090382 "phagosome maturation" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1559997 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
CTD:10981 KO:K07918 OMA:FCREGGF OrthoDB:EOG4F7NM0
GeneTree:ENSGT00700000104228 EMBL:CH473994 IPI:IPI00360584
RefSeq:NP_001102372.1 UniGene:Rn.167294 Ensembl:ENSRNOT00000019121
GeneID:365042 KEGG:rno:365042 UCSC:RGD:1559997 NextBio:686539
Uniprot:D4AEG2
Length = 223
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 128/181 (70%), Positives = 159/181 (87%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
+P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS +YRATIGVDFALKVL+WD T++RL
Sbjct: 16 VPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFALKVLNWDSRTLVRL 75
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWDIAGQERFGNMTRVYYKEA+GAF+VFD++R++TFDAVLKWK DLD+KV LP+G+PIP
Sbjct: 76 QLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHLPNGSPIP 135
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
VLLANKCDQ K+ + +P+++++F K+H F GWFETSAKDNINID+A + LV+ +L N
Sbjct: 136 AVLLANKCDQKKDS-SQSPSQMNQFCKDHGFIGWFETSAKDNINIDEATRFLVENMLANQ 194
Query: 631 K 631
+
Sbjct: 195 Q 195
>UNIPROTKB|F1STR2 [details] [associations]
symbol:RAB38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104228 KO:K07923 OMA:TKWKNDL
EMBL:FP236293 RefSeq:XP_003482633.1 Ensembl:ENSSSCT00000016279
GeneID:100621853 KEGG:ssc:100621853 Uniprot:F1STR2
Length = 211
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 132/181 (72%), Positives = 156/181 (86%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
++P K E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++R
Sbjct: 2 QVPHK-EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR 60
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
LQLWDIAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+
Sbjct: 61 LQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPV 120
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
VLLANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N
Sbjct: 121 SVVLLANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILAN 180
Query: 630 D 630
+
Sbjct: 181 E 181
>UNIPROTKB|P57729 [details] [associations]
symbol:RAB38 "Ras-related protein Rab-38" species:9606
"Homo sapiens" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0042470
"melanosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=NAS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=NAS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0015031 "protein transport" evidence=NAS] [GO:0003924 "GTPase
activity" evidence=NAS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0090383 "phagosome acidification" evidence=IMP]
[GO:0006184 "GTP catabolic process" evidence=NAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:AF235022 EMBL:BT009842
EMBL:DQ178619 EMBL:BC015808 IPI:IPI00939888 RefSeq:NP_071732.1
UniGene:Hs.591975 ProteinModelPortal:P57729 SMR:P57729
STRING:P57729 PhosphoSite:P57729 DMDM:12230516 PaxDb:P57729
PRIDE:P57729 DNASU:23682 Ensembl:ENST00000243662 GeneID:23682
KEGG:hsa:23682 UCSC:uc001pcj.2 CTD:23682 GeneCards:GC11M087846
HGNC:HGNC:9776 MIM:606281 neXtProt:NX_P57729 PharmGKB:PA34129
InParanoid:P57729 KO:K07923 OMA:TKWKNDL OrthoDB:EOG49GKHH
PhylomeDB:P57729 GenomeRNAi:23682 NextBio:46557 Bgee:P57729
CleanEx:HS_RAB38 Genevestigator:P57729 GermOnline:ENSG00000123892
Uniprot:P57729
Length = 211
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 130/176 (73%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>UNIPROTKB|E1B9C0 [details] [associations]
symbol:RAB38 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104228 OMA:TKWKNDL
EMBL:DAAA02062489 IPI:IPI00823522 Ensembl:ENSBTAT00000020971
Uniprot:E1B9C0
Length = 213
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 132/183 (72%), Positives = 156/183 (85%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
++P K E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++R
Sbjct: 2 QVPHK-EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR 60
Query: 510 LQLWDIA--GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
LQLWDIA GQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G
Sbjct: 61 LQLWDIAVIGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGK 120
Query: 568 PIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
P+ VLLANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL
Sbjct: 121 PVSVVLLANKCDQGKDVLLNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHIL 180
Query: 628 END 630
N+
Sbjct: 181 ANE 183
>ZFIN|ZDB-GENE-091118-91 [details] [associations]
symbol:si:ch73-173m3.3 "si:ch73-173m3.3"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-091118-91 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 EMBL:CT025910 IPI:IPI00997692
ProteinModelPortal:F1QXT5 Ensembl:ENSDART00000109719 Uniprot:F1QXT5
Length = 217
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 133/211 (63%), Positives = 162/211 (76%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E L+K+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD +T++RLQLW
Sbjct: 6 RKEHLFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLHWDSQTVVRLQLW 65
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQER+GNMTRVYY+EAVGA IVFDVTR++TFDAVLKWK DLD KV+L +G P+P VL
Sbjct: 66 DIAGQERYGNMTRVYYREAVGALIVFDVTRSSTFDAVLKWKDDLDLKVSLNNGKPVPAVL 125
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK-V 632
LANK DQ +EG+ + K+D F KE+ F GWFETSAK+N NI+ AAK LV IL +++ +
Sbjct: 126 LANKSDQSREGLCSQIPKLDTFCKENGFVGWFETSAKENSNIEAAAKCLVDHILAHEENI 185
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
N D A+ N N++E R C
Sbjct: 186 VNNTDPDVV--ALPGYNNNTKERVRSRCMTC 214
>ZFIN|ZDB-GENE-070424-24 [details] [associations]
symbol:zgc:162171 "zgc:162171" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-070424-24 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104228 EMBL:AL954129
EMBL:BC133896 IPI:IPI00844931 RefSeq:NP_001076317.1
UniGene:Dr.103256 Ensembl:ENSDART00000101408 GeneID:565931
KEGG:dre:565931 InParanoid:A3KNK9 OMA:QAVLKWK NextBio:20887930
Uniprot:A3KNK9
Length = 224
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 128/212 (60%), Positives = 157/212 (74%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E L K+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WDH T++RLQLW
Sbjct: 2 QQERLLKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLNWDHRTVVRLQLW 61
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQER+GNMTRVYY+EAVGA +VFD+TRA+TF AVLKWK+DLD+KV L +G P+P VL
Sbjct: 62 DIAGQERYGNMTRVYYREAVGALVVFDMTRASTFQAVLKWKKDLDSKVALGNGRPLPAVL 121
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--ENDK 631
LANKCDQ + G+ + K++ F ++H F GW+ETSAKDN NID A LV+ I+ E +
Sbjct: 122 LANKCDQQRYGLCSKLPKLEHFSRDHGFVGWYETSAKDNTNIDAAIMRLVENIMAVEEEN 181
Query: 632 VQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
V D F N +E + R C
Sbjct: 182 VPVESDPSVLILPAFDYNL--KERSDSRCSVC 211
>ZFIN|ZDB-GENE-090821-8 [details] [associations]
symbol:rab38a "RAB38a, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-090821-8 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104228 OrthoDB:EOG49GKHH EMBL:CABZ01044959
EMBL:CABZ01044960 EMBL:BC150365 IPI:IPI00511295 UniGene:Dr.141623
Ensembl:ENSDART00000040125 OMA:NIDEAAH Uniprot:A7E2I6
Length = 202
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 131/208 (62%), Positives = 163/208 (78%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
LYKILVIG+LG GKTSIIKRYVHQ FSP+YRATIGVDFALKVL+ D ET+ RLQLWDIAG
Sbjct: 1 LYKILVIGDLGVGKTSIIKRYVHQNFSPNYRATIGVDFALKVLNLDQETV-RLQLWDIAG 59
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERFGNMTRVYY+EA+GAFIVFDVTR +TF+AV KWK+DLDAK++L +G + VLLANK
Sbjct: 60 QERFGNMTRVYYREAMGAFIVFDVTRPSTFEAVTKWKEDLDAKLSLSNGKQVAAVLLANK 119
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--ENDKVQAN 635
CDQ ++ + NN K+++F +E+ F GWFETSAK+NINID+AA LV+ I+ END +Q
Sbjct: 120 CDQGRDVLTNNGIKMEQFCQENGFVGWFETSAKENINIDEAAHCLVKHIIANENDLLQ-- 177
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
SE +++ + ++ G AC
Sbjct: 178 ------SEVADTISPQQESSRGGTCSAC 199
>ZFIN|ZDB-GENE-091204-345 [details] [associations]
symbol:rab38b "RAB38b, member of RAS oncogene
family" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-091204-345
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 EMBL:CABZ01031628 EMBL:CT573197
IPI:IPI00832591 ProteinModelPortal:E7F5L3
Ensembl:ENSDART00000100438 Bgee:E7F5L3 Uniprot:E7F5L3
Length = 213
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 125/183 (68%), Positives = 153/183 (83%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+++E LYKILVIG+LG GKTSIIKRYVHQ +S +YRATIGVDFALKVL+WD ET+ RLQL
Sbjct: 4 NQKEHLYKILVIGDLGVGKTSIIKRYVHQTYSTNYRATIGVDFALKVLNWDSETV-RLQL 62
Query: 513 WDIA---GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
WDIA GQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK+DLD+K+ L +G I
Sbjct: 63 WDIAAPEGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVSKWKEDLDSKLILSNGQSI 122
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL-- 627
VLLANKCDQ ++ + NN K+D++ +E+ F GWFETSAK+N+NI+DAA LV+ I+
Sbjct: 123 ATVLLANKCDQNRDFLTNNGLKMDQYCRENGFVGWFETSAKENVNINDAANFLVKHIIAS 182
Query: 628 END 630
END
Sbjct: 183 END 185
>DICTYBASE|DDB_G0283603 [details] [associations]
symbol:rab32A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0283603
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0045335
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 OMA:FCREGGF HSSP:P35288
EMBL:AF116859 RefSeq:XP_638960.1 ProteinModelPortal:Q54QR3
PRIDE:Q54QR3 EnsemblProtists:DDB0201639 GeneID:8624206
KEGG:ddi:DDB_G0283603 ProtClustDB:CLSZ2430347 Uniprot:Q54QR3
Length = 219
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 124/207 (59%), Positives = 155/207 (74%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+LYKILV+G++G GKTSIIKR+VH FS HY++TIGVDFALKV++WD +T +RLQLWDI
Sbjct: 13 EYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQLWDI 72
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTL-PDGNPIPCVLL 574
AGQERFG+MTRVYYKEAVGA I FDVTR +TF+AV KWK D+D+KVT D PIP VLL
Sbjct: 73 AGQERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTYGADEKPIPVVLL 132
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
ANKCD K+ +D++ K++ F GWFETSAK+N+NI+ AA+ LV IL+ND V+
Sbjct: 133 ANKCDLGKDAFIKTANDMDKYCKDNGFIGWFETSAKENMNIEKAARFLVDHILKND-VRR 191
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNC 661
N T + LN+ Q T G +C
Sbjct: 192 NQPIEGTIQPG-DLNKQPQPTSTGPSC 217
>UNIPROTKB|I3LHE8 [details] [associations]
symbol:RAB7L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104228 KO:K07916 OMA:GQERFIS
EMBL:FP565441 RefSeq:XP_003357447.1 RefSeq:XP_003357448.1
RefSeq:XP_003357449.1 Ensembl:ENSSSCT00000028022 GeneID:100626414
KEGG:ssc:100626414 Uniprot:I3LHE8
Length = 203
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 94/177 (53%), Positives = 133/177 (75%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEVVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGGPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N K
Sbjct: 124 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSK 178
>UNIPROTKB|A5PJV4 [details] [associations]
symbol:RAB7L1 "RAB7L1 protein" species:9913 "Bos taurus"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104228 CTD:8934 KO:K07916 OMA:GQERFIS
OrthoDB:EOG4SN1PN EMBL:DAAA02041949 EMBL:BC142252 IPI:IPI00712290
RefSeq:NP_001092564.1 UniGene:Bt.28513 Ensembl:ENSBTAT00000004192
GeneID:539000 KEGG:bta:539000 InParanoid:A5PJV4 NextBio:20877717
Uniprot:A5PJV4
Length = 203
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 94/177 (53%), Positives = 133/177 (75%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF KWKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQKWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 178
>UNIPROTKB|O14966 [details] [associations]
symbol:RAB7L1 "Ras-related protein Rab-7L1" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AC119673 HOGENOM:HOG000233968 EMBL:D84488 EMBL:AK308359
EMBL:AK303879 EMBL:BC002585 IPI:IPI00024775 IPI:IPI00909756
IPI:IPI00913930 RefSeq:NP_001129134.1 RefSeq:NP_001129135.1
RefSeq:NP_001129136.1 RefSeq:NP_003920.1 UniGene:Hs.115325
ProteinModelPortal:O14966 SMR:O14966 DIP:DIP-31215N IntAct:O14966
STRING:O14966 PhosphoSite:O14966 PaxDb:O14966 PRIDE:O14966
DNASU:8934 Ensembl:ENST00000235932 Ensembl:ENST00000367139
Ensembl:ENST00000414729 Ensembl:ENST00000437324
Ensembl:ENST00000446390 GeneID:8934 KEGG:hsa:8934 UCSC:uc001hde.4
CTD:8934 GeneCards:GC01M205738 HGNC:HGNC:9789 HPA:CAB020822
HPA:HPA026303 MIM:603949 neXtProt:NX_O14966 PharmGKB:PA34151
InParanoid:O14966 KO:K07916 OMA:GQERFIS OrthoDB:EOG4SN1PN
PhylomeDB:O14966 ChiTaRS:RAB7L1 GenomeRNAi:8934 NextBio:33592
ArrayExpress:O14966 Bgee:O14966 CleanEx:HS_RAB7L1
Genevestigator:O14966 GermOnline:ENSG00000117280 Uniprot:O14966
Length = 203
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 95/175 (54%), Positives = 132/175 (75%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W I+RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN 176
>UNIPROTKB|F1P9G2 [details] [associations]
symbol:RAB7L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 OMA:GQERFIS EMBL:AAEX03018265
Ensembl:ENSCAFT00000016170 Uniprot:F1P9G2
Length = 225
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 92/177 (51%), Positives = 132/177 (74%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY F HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 26 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFQQHYKSTVGVDFALKVLQWSDSEMVRLQLWD 85
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 86 IAGQERFTSMTRLYYRDASACIIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 145
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 146 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 200
>UNIPROTKB|F1N9R7 [details] [associations]
symbol:RAB7L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 OMA:GQERFIS EMBL:AADN02044935
IPI:IPI00603890 ProteinModelPortal:F1N9R7
Ensembl:ENSGALT00000001008 Uniprot:F1N9R7
Length = 193
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 91/176 (51%), Positives = 132/176 (75%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+R+ ++K+LV+G+ GKTS+++RY + F+ HY++T+GVDFALKV+ W +RLQLW
Sbjct: 17 QRDRMFKVLVVGDATVGKTSLVQRYANDSFNRHYKSTVGVDFALKVVQWSESETVRLQLW 76
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERF +MTR+YY+EA I+FDVT +TF KWKQDLD+K+TLPDG+P+PC+L
Sbjct: 77 DIAGQERFTSMTRLYYREASACVIMFDVTNVSTFSNSQKWKQDLDSKLTLPDGSPVPCLL 136
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
LANKCD + ++D F KE+ FSGW ETS K+N NI+++ + L++K++ +
Sbjct: 137 LANKCDLSPWAVTRE--EVDRFSKENGFSGWVETSVKENKNINESMRVLIEKMMSS 190
>MGI|MGI:2385107 [details] [associations]
symbol:Rab7l1 "RAB7, member RAS oncogene family-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:2385107
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4SN1PN EMBL:BC016133 EMBL:BC029056
IPI:IPI00130361 UniGene:Mm.34027 ProteinModelPortal:Q91YQ1
SMR:Q91YQ1 STRING:Q91YQ1 PhosphoSite:Q91YQ1 PaxDb:Q91YQ1
PRIDE:Q91YQ1 InParanoid:Q91YQ1 CleanEx:MM_RAB7L1
Genevestigator:Q91YQ1 GermOnline:ENSMUSG00000026433 Uniprot:Q91YQ1
Length = 204
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 94/177 (53%), Positives = 131/177 (74%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANK D ++ + +ID F KE+ F+GW ETS K+N NI++A + LV+K++ N +
Sbjct: 124 ANKSDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMNNSR 178
>RGD|620892 [details] [associations]
symbol:Rab7l1 "RAB7, member RAS oncogene family-like 1"
species:10116 "Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005525 "GTP binding" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620892 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 PROSITE:PS51419
HOVERGEN:HBG009351 HSSP:P51151 CTD:8934 KO:K07916 EMBL:X96663
IPI:IPI00209145 RefSeq:NP_598274.1 UniGene:Rn.4323
ProteinModelPortal:Q63481 GeneID:171122 KEGG:rno:171122
NextBio:621866 Genevestigator:Q63481 Uniprot:Q63481
Length = 204
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 94/177 (53%), Positives = 131/177 (74%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANK D ++ + +ID F KE+ F+GW ETS K+N NI++A + LV+K++ N +
Sbjct: 124 ANKSDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMNNSR 178
>DICTYBASE|DDB_G0269416 [details] [associations]
symbol:rab32B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
dictyBase:DDB_G0269416 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:P51151
RefSeq:XP_645950.1 ProteinModelPortal:Q55E31
EnsemblProtists:DDB0229397 GeneID:8616894 KEGG:ddi:DDB_G0269416
OMA:CKENNFI Uniprot:Q55E31
Length = 260
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 107/258 (41%), Positives = 158/258 (61%)
Query: 407 KPF-TSPNSS--SNGEKETAASPNTSVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILV 463
K F T P+ S SN ++ N S+++ + N ++ V D + LYK+L+
Sbjct: 9 KEFDTDPDVSTDSNYNNNNNSNNNNSIISNSNNNNNNNNNNVDD----TDIEKHLYKVLL 64
Query: 464 IGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGN 523
IG+ GK+SIIKRY FSP+Y+ TIGVDF++K + W+ I+ LQLWDIAG ERFG
Sbjct: 65 IGDYAVGKSSIIKRYCTGIFSPNYKLTIGVDFSVKDIEWEKNKIVSLQLWDIAGHERFGT 124
Query: 524 MTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKE 583
MTRVYY+ A+ A IVFD++R +TFDAV KW++D+++KV L + PIP +LLANK D
Sbjct: 125 MTRVYYRYAIAAIIVFDLSRPSTFDAVTKWREDVNSKVVLANQEPIPVLLLANKSDLSTS 184
Query: 584 GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDSHATSE 643
+ + +D F KE+NF GWF TSA ++ NI++A L ++ILE K N +
Sbjct: 185 YVDSE--MLDRFCKENNFIGWFATSASNDTNINEAMHFLTKEILEVAKT--NHPPKPEED 240
Query: 644 AVFSLNRNSQETKNGRNC 661
+ N +++ + ++C
Sbjct: 241 TLELTKTNGEKSDDSKSC 258
>ZFIN|ZDB-GENE-090821-4 [details] [associations]
symbol:rab32b "RAB32b, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-090821-4 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 EMBL:CABZ01057745 IPI:IPI00933856
ProteinModelPortal:F1R8U8 Ensembl:ENSDART00000060336 Bgee:F1R8U8
Uniprot:F1R8U8
Length = 218
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 87/173 (50%), Positives = 125/173 (72%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E L+K+LVIG+ GK+S +KRYV F + +IGVDF++KV+ WD T +RLQLWDI
Sbjct: 21 EHLFKVLVIGDHKVGKSSFVKRYVRNQFYEELKTSIGVDFSMKVIDWDAHTRVRLQLWDI 80
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER + RVY++ + GAF+V+D+T ++ D L WK++LD +V L +G+PIP VLLA
Sbjct: 81 AGQERVRGLNRVYFRGSSGAFVVYDLTNGSSLDGALNWKRELDCQVMLKNGHPIPAVLLA 140
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD+ K N + +++ +E F+G F+TSAK+NIN+D+AAK LV+ IL+
Sbjct: 141 NKCDETKVS-RRNASLLEKLCQEKGFTGCFQTSAKENINVDEAAKFLVKHILQ 192
>WB|WBGene00011083 [details] [associations]
symbol:glo-1 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007040 "lysosome organization" evidence=IMP]
[GO:0019915 "lipid storage" evidence=IMP] [GO:0005764 "lysosome"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005764 GO:GO:0007040 GO:GO:0019915 EMBL:Z48621 KO:K07976
GeneTree:ENSGT00700000104228 OMA:TKWKNDL EMBL:DQ016970
RefSeq:NP_001024837.1 UniGene:Cel.31333 ProteinModelPortal:G5EBF0
SMR:G5EBF0 EnsemblMetazoa:R07B1.12 GeneID:3565633
KEGG:cel:CELE_R07B1.12 CTD:3565633 WormBase:R07B1.12 NextBio:957237
Uniprot:G5EBF0
Length = 212
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 92/203 (45%), Positives = 132/203 (65%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YK+LVIG+ G GKTSII+R+VH FS +Y+ TIGVDFALK+L D T++ LQ+WDI+GQ
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
+R+G MTRVYYK+A A IV D TR T + L+WK DLD KVTL DG+P+P +LLANKC
Sbjct: 72 DRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKC 131
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDS 638
D + + ++ K+ + + F G F TSAK+++ I++A K L ++ ++
Sbjct: 132 DIDNK-LGDD--KLYDLETNNGFVGSFRTSAKESVGIEEAFKFLANTVISTEQGGQYDVP 188
Query: 639 HATSEAVFSLNRNSQETKNGRNC 661
E +L+ N+ ++ C
Sbjct: 189 FMNREGNVNLDDNTTHSRYDSKC 211
>UNIPROTKB|J9P9M0 [details] [associations]
symbol:RAB32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 GO:GO:0007264 GeneTree:ENSGT00700000104228
EMBL:AAEX03000248 Ensembl:ENSCAFT00000048400 OMA:CDIENQL
Uniprot:J9P9M0
Length = 167
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 87/134 (64%), Positives = 109/134 (81%)
Query: 507 IIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDG 566
+I + + I GQERFGNMTRVYYKEAVGAF+VFD++R +TF+AVLKWK DLD+KV LP+G
Sbjct: 16 VISVVYFQILGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKSDLDSKVHLPNG 75
Query: 567 NPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+PIP VLLANKCDQ K+G NP ++D+F KEH F+GWFETSAKDNINID+AA+ LV+ I
Sbjct: 76 SPIPAVLLANKCDQKKDG-GQNPPQMDQFCKEHGFTGWFETSAKDNINIDEAARFLVENI 134
Query: 627 LENDKVQANGDSHA 640
L N + N ++ A
Sbjct: 135 LANHQSFPNEENDA 148
>UNIPROTKB|H0YDB7 [details] [associations]
symbol:RAB38 "Ras-related protein Rab-38" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525
GO:GO:0007264 HGNC:HGNC:9776 EMBL:AP001642 EMBL:AP005436
Ensembl:ENST00000526372 Uniprot:H0YDB7
Length = 210
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 79/114 (69%), Positives = 97/114 (85%)
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLLAN
Sbjct: 67 GQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLLAN 126
Query: 577 KCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
KCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 127 KCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 180
>DICTYBASE|DDB_G0275675 [details] [associations]
symbol:rab32C "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
dictyBase:DDB_G0275675 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 PROSITE:PS51419 eggNOG:COG1100 HSSP:Q9UL25
KO:K07976 RefSeq:XP_643480.1 ProteinModelPortal:Q8MXQ2 PRIDE:Q8MXQ2
EnsemblProtists:DDB0230000 GeneID:8620061 KEGG:ddi:DDB_G0275675
OMA:DEAISLK Uniprot:Q8MXQ2
Length = 224
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 91/208 (43%), Positives = 124/208 (59%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
+K D KILV+G+L GKTSII+RY H F P Y+ TIGVDF KVL + ++
Sbjct: 19 NKNNDDEAISLKILVVGKLACGKTSIIQRYCHNNFQPKYKPTIGVDFQQKVLEIMGQKVL 78
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
LQLWDIAGQERFG+MTRVY++ A GA IVFD TR+ TF WK D+D + N
Sbjct: 79 -LQLWDIAGQERFGHMTRVYFQNAHGAVIVFDATRSGTFLGAKAWKDDID--YCFNNEN- 134
Query: 569 IPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+P +LLANKCD P I+ F +++ F+ +F TSAK++ I++A + LV+ ILE
Sbjct: 135 LPTILLANKCDLLTPPYTF-PEDINTFCEQNRFNKYFYTSAKEDTGINEALEELVKIILE 193
Query: 629 NDKVQANGDSHATSEAVFSLNRNSQETK 656
+ + Q S+ S ++K
Sbjct: 194 SYQTQEQSTGFKLSDQSQSTETTPTQSK 221
>ZFIN|ZDB-GENE-040718-304 [details] [associations]
symbol:rab10 "RAB10, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-304 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:10890
KO:K07903 OMA:WKSKCCS GeneTree:ENSGT00700000104031
EMBL:CABZ01076797 EMBL:CABZ01076798 EMBL:CABZ01076799 EMBL:BC076234
IPI:IPI00486247 RefSeq:NP_001002566.1 UniGene:Dr.33795 SMR:Q6DGV5
STRING:Q6DGV5 Ensembl:ENSDART00000067776 GeneID:436839
KEGG:dre:436839 InParanoid:Q6DGV5 NextBio:20831271 Uniprot:Q6DGV5
Length = 201
Score = 325 (119.5 bits), Expect = 6.9e-29, P = 6.9e-29
Identities = 68/178 (38%), Positives = 108/178 (60%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + AK ++ KEH +FETSAK NINI+ A TL + IL+ V+
Sbjct: 122 NKCDMEDKRVVPK-AKGEQIAKEHGIR-FFETSAKANINIEKAFLTLAEDILKKTPVK 177
>UNIPROTKB|P22127 [details] [associations]
symbol:P22127 "Ras-related protein Rab-10" species:7785
"Discopyge ommata" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISS] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0006893 "Golgi to plasma membrane transport" evidence=ISS]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0030859 "polarized epithelial cell differentiation"
evidence=ISS] [GO:0032593 "insulin-responsive compartment"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=ISS] [GO:0045200 "establishment of neuroblast
polarity" evidence=ISS] [GO:0055037 "recycling endosome"
evidence=ISS] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=ISS] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=ISS] [GO:0072372 "primary cilium"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0097051 "establishment of protein localization to
endoplasmic reticulum membrane" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 EMBL:M38390
PIR:A38625 ProteinModelPortal:P22127 SMR:P22127 PRIDE:P22127
Uniprot:P22127
Length = 200
Score = 321 (118.1 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 67/178 (37%), Positives = 108/178 (60%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + H I+LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVEL-HGKKIKLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + +K ++ +EH +FETSAK NINI+ A TL + IL+ V+
Sbjct: 122 NKCDMEDKRVVLK-SKGEQIAREHAIR-FFETSAKANINIEKAFLTLAEDILQKTPVK 177
>ZFIN|ZDB-GENE-040704-16 [details] [associations]
symbol:zgc:91909 "zgc:91909" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040704-16 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07897 GeneTree:ENSGT00700000104345
OMA:WETEMEL EMBL:CR855300 EMBL:BC072717 IPI:IPI00509134
RefSeq:NP_001002178.1 UniGene:Dr.32183 SMR:Q6GQM5 STRING:Q6GQM5
Ensembl:ENSDART00000004065 Ensembl:ENSDART00000124225 GeneID:431725
KEGG:dre:431725 InParanoid:Q6GQM5 NextBio:20830961 Uniprot:Q6GQM5
Length = 204
Score = 319 (117.4 bits), Expect = 3.3e-28, P = 3.3e-28
Identities = 68/213 (31%), Positives = 118/213 (55%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV+ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D ++ A+ + + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLDNRQVSTKRAQA--WCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
V D + + + L N + NG C+C
Sbjct: 178 SV----DKYDFPDEI-KLG-NDRPMSNGEGCSC 204
>FB|FBgn0015789 [details] [associations]
symbol:Rab10 "Rab10" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS] [GO:0046331
"lateral inhibition" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:AE014298 GO:GO:0003924 GO:GO:0046331
eggNOG:COG1100 KO:K07976 HSSP:P07560 CTD:10890 OMA:WKSKCCS
GeneTree:ENSGT00700000104031 EMBL:AY060425 EMBL:AB006189
RefSeq:NP_523419.1 UniGene:Dm.2609 SMR:O15971 STRING:O15971
EnsemblMetazoa:FBtr0077337 GeneID:33025 KEGG:dme:Dmel_CG17060
UCSC:CG17060-RA FlyBase:FBgn0015789 InParanoid:O15971
OrthoDB:EOG4XWDDW GenomeRNAi:33025 NextBio:781571 Uniprot:O15971
Length = 204
Score = 317 (116.6 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 72/208 (34%), Positives = 117/208 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + N + + +EH + ETSAK NINI+ A L + IL DK
Sbjct: 122 NKCDMTDKRVVNKE-RGEAIAREHGIR-FMETSAKSNINIERAFCELAEAIL--DKTSGR 177
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
+S E V ++R +QE G + C
Sbjct: 178 -ESAENQERVI-IDRRNQEKAPGYSKCC 203
>UNIPROTKB|J9NUV0 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 EMBL:AAEX03010790 EMBL:AAEX03010791
Ensembl:ENSCAFT00000048477 Uniprot:J9NUV0
Length = 209
Score = 317 (116.6 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 73/203 (35%), Positives = 115/203 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL KV++N
Sbjct: 122 NKCDMDDKRVVPK-GKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILR--KVRSN 177
Query: 636 GDSHATSEAVFSLNRNSQETKNG 658
S LN ET+ G
Sbjct: 178 FYSQGAQGHNSFLNE--VETEQG 198
>UNIPROTKB|I3L5L9 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923
GeneTree:ENSGT00700000104031 OMA:AMGIVLI EMBL:CU407290
Ensembl:ENSSSCT00000031505 Uniprot:I3L5L9
Length = 242
Score = 317 (116.6 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 73/217 (33%), Positives = 121/217 (55%)
Query: 447 PYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHET 506
P S M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + +
Sbjct: 36 PVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKK 95
Query: 507 IIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDG 566
I +LQ+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + K G
Sbjct: 96 I-KLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSI--KENASAG 152
Query: 567 NPIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
+ +LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L +
Sbjct: 153 --VERLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARD 207
Query: 626 ILENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCA 662
IL +++ G S S + + + KN C+
Sbjct: 208 IL----LKSGGRRLGNSNKPHSTDLKTCDKKNTNKCS 240
>UNIPROTKB|O97572 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9986
"Oryctolagus cuniculus" [GO:0005770 "late endosome" evidence=ISS]
[GO:0045022 "early endosome to late endosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 OrthoDB:EOG4QFWF4
EMBL:AF050174 RefSeq:NP_001075503.1 UniGene:Ocu.2322
ProteinModelPortal:O97572 SMR:O97572 PRIDE:O97572 GeneID:100008682
Uniprot:O97572
Length = 207
Score = 317 (116.6 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 68/213 (31%), Positives = 120/213 (56%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + K +N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRQVATKRAQAWSYSK-NNIP-YFETSAKEAINVEQAFQTIARNAL--- 174
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K + + + L++N + + +C+C
Sbjct: 175 KQETEVELYNEFPEPMKLDKNDRAKTSAESCSC 207
>TAIR|locus:2041036 [details] [associations]
symbol:ARA4 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA;IDA] [GO:0005525 "GTP
binding" evidence=IEA;ISS;IDA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005795 "Golgi stack" evidence=IDA] [GO:0005798
"Golgi-associated vesicle" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] [GO:0009408 "response to heat" evidence=IEP]
[GO:0048219 "inter-Golgi cisterna vesicle-mediated transport"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0007264 GO:GO:0000139 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0015031 GO:GO:0003924 GO:GO:0005795 GO:GO:0009408
GO:GO:0005798 GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100
EMBL:AC004450 KO:K07976 HOGENOM:HOG000233968
ProtClustDB:CLSN2683060 EMBL:D01026 EMBL:BT025784 EMBL:AK317205
IPI:IPI00531444 PIR:JS0641 RefSeq:NP_181842.1 UniGene:At.259
ProteinModelPortal:P28187 SMR:P28187 STRING:P28187 PaxDb:P28187
PRIDE:P28187 EnsemblPlants:AT2G43130.1 GeneID:818915
KEGG:ath:AT2G43130 TAIR:At2g43130 InParanoid:P28187 OMA:YDITRSS
PhylomeDB:P28187 Genevestigator:P28187 GermOnline:AT2G43130
GO:GO:0048219 Uniprot:P28187
Length = 214
Score = 317 (116.6 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 77/216 (35%), Positives = 126/216 (58%)
Query: 453 DKR--EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
D+R E+L+KI++IG+ GK++++ RY F+P+ +ATIGV+F + + D + + +
Sbjct: 5 DERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV-KA 63
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ AVGA +V+D+TR++TF+ V +W +L+ T D +
Sbjct: 64 QIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELN---THSD-TTVA 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN- 629
+L+ NKCD E I + + + E + ETSA D+ N+ A + ++++I N
Sbjct: 120 KMLIGNKCDL--ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNI 177
Query: 630 DKVQANGDSHATSEAV--FSLNRNSQE-TKNGRNCA 662
+ Q N DS+ V SL +N E TK C+
Sbjct: 178 SRKQLNSDSYKEELTVNRVSLVKNENEGTKTFSCCS 213
>UNIPROTKB|P20337 [details] [associations]
symbol:RAB3B "Ras-related protein Rab-3B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0030141
"secretory granule" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0030141 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157
EMBL:AL445685 GO:GO:0018125 EMBL:AL589663 HOGENOM:HOG000233968
OrthoDB:EOG4TB4C6 CTD:5865 KO:K06108 OMA:WFDFFEA EMBL:M28214
EMBL:AF498932 EMBL:BC005035 IPI:IPI00300562 PIR:D34323
RefSeq:NP_002858.2 UniGene:Hs.123072 PDB:3DZ8 PDBsum:3DZ8
ProteinModelPortal:P20337 SMR:P20337 STRING:P20337
PhosphoSite:P20337 DMDM:38258903 PaxDb:P20337 PeptideAtlas:P20337
PRIDE:P20337 DNASU:5865 Ensembl:ENST00000371655
Ensembl:ENST00000537650 GeneID:5865 KEGG:hsa:5865 UCSC:uc001cth.3
GeneCards:GC01M052373 HGNC:HGNC:9778 HPA:CAB023293 HPA:HPA003159
MIM:179510 neXtProt:NX_P20337 PharmGKB:PA34133 InParanoid:P20337
PhylomeDB:P20337 EvolutionaryTrace:P20337 GenomeRNAi:5865
NextBio:22778 Bgee:P20337 CleanEx:HS_RAB3B Genevestigator:P20337
GermOnline:ENSG00000169213 Uniprot:P20337
Length = 219
Score = 316 (116.3 bits), Expect = 7.1e-28, P = 7.1e-28
Identities = 75/239 (31%), Positives = 130/239 (54%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV W + K D + +L+ NKCD +E + P + + + E +FE S
Sbjct: 112 AVQDWATQI--KTYSWDNAQV--ILVGNKCDMEEERVV--PTEKGQLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKNG----RNCAC 663
AK+NI++ A + LV I DK+ DS T ++ ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKMS---DSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC 219
>UNIPROTKB|Q5ZIT5 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0097051 "establishment of protein
localization to endoplasmic reticulum membrane" evidence=ISS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=ISS]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=ISS] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072372 "primary cilium" evidence=ISS] [GO:0032593
"insulin-responsive compartment" evidence=ISS] [GO:0030859
"polarized epithelial cell differentiation" evidence=ISS]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=ISS] [GO:0000145 "exocyst" evidence=ISS] [GO:0005794
"Golgi apparatus" evidence=ISS] [GO:0005802 "trans-Golgi network"
evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0006893 "Golgi to plasma membrane transport"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0045200
"establishment of neuroblast polarity" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 EMBL:AJ720699
IPI:IPI00593138 RefSeq:NP_001026268.1 UniGene:Gga.2486 HSSP:P55258
ProteinModelPortal:Q5ZIT5 SMR:Q5ZIT5 PRIDE:Q5ZIT5 GeneID:421994
KEGG:gga:421994 CTD:10890 InParanoid:Q5ZIT5 KO:K07903
NextBio:20824687 Uniprot:Q5ZIT5
Length = 200
Score = 315 (115.9 bits), Expect = 9.2e-28, P = 9.2e-28
Identities = 66/178 (37%), Positives = 106/178 (59%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+D +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + AK ++ +EH +FETSAK NINI+ A TL + IL V+
Sbjct: 122 NKCDMEDKRVVPK-AKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRKTPVK 177
>UNIPROTKB|Q3T0F5 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] [GO:0090383 "phagosome
acidification" evidence=ISS] [GO:0045022 "early endosome to late
endosome transport" evidence=ISS] [GO:0005770 "late endosome"
evidence=ISS] [GO:0042470 "melanosome" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC102415
IPI:IPI00704752 RefSeq:NP_001030253.1 UniGene:Bt.41314
ProteinModelPortal:Q3T0F5 SMR:Q3T0F5 STRING:Q3T0F5 PRIDE:Q3T0F5
GeneID:509970 KEGG:bta:509970 CTD:7879 InParanoid:Q3T0F5 KO:K07897
OrthoDB:EOG4QFWF4 NextBio:20869222 Uniprot:Q3T0F5
Length = 207
Score = 315 (115.9 bits), Expect = 9.2e-28, P = 9.2e-28
Identities = 70/214 (32%), Positives = 123/214 (57%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + K +N +FETSAK+ IN++ A +T+V+ L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQAWCYSK-NNIP-YFETSAKEAINVEQAFQTIVRNALKQE 177
Query: 631 -KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+V+ + E + L++N + + C+C
Sbjct: 178 TEVELYNEF---PEPI-KLDKNDRTKPSAEGCSC 207
>MGI|MGI:1917158 [details] [associations]
symbol:Rab3b "RAB3B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IDA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IDA] [GO:0030141
"secretory granule" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1917158 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0018125 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 CTD:5865 KO:K06108 EMBL:AF312036
EMBL:AF307514 EMBL:AK012165 EMBL:AK082959 EMBL:BC051918
EMBL:BC057173 IPI:IPI00113112 RefSeq:NP_076026.1 UniGene:Mm.41580
ProteinModelPortal:Q9CZT8 SMR:Q9CZT8 IntAct:Q9CZT8
MINT:MINT-1341069 STRING:Q9CZT8 PhosphoSite:Q9CZT8 PaxDb:Q9CZT8
PRIDE:Q9CZT8 Ensembl:ENSMUST00000003502 Ensembl:ENSMUST00000106650
GeneID:69908 KEGG:mmu:69908 NextBio:330587 Bgee:Q9CZT8
CleanEx:MM_RAB3B Genevestigator:Q9CZT8
GermOnline:ENSMUSG00000003411 Uniprot:Q9CZT8
Length = 219
Score = 314 (115.6 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 76/239 (31%), Positives = 128/239 (53%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT I + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGIKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV W + K D + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AVQDWATQI--KTYSWDNAQV--ILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKNG----RNCAC 663
AK+NI++ A + LV I DK+ DS T +V ++ ++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKMS---DSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
>UNIPROTKB|A6QLS9 [details] [associations]
symbol:RAB10 "RAB10 protein" species:9913 "Bos taurus"
[GO:0072659 "protein localization to plasma membrane" evidence=IEA]
[GO:0072372 "primary cilium" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0032869 "cellular response to insulin
stimulus" evidence=IEA] [GO:0032593 "insulin-responsive
compartment" evidence=IEA] [GO:0031489 "myosin V binding"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:10890 KO:K07903
OMA:WKSKCCS GeneTree:ENSGT00700000104031 EMBL:DAAA02031611
EMBL:DAAA02031612 EMBL:DAAA02031613 EMBL:BC148073 IPI:IPI00708125
RefSeq:NP_001094758.1 UniGene:Bt.103028 SMR:A6QLS9
Ensembl:ENSBTAT00000001303 GeneID:783373 KEGG:bta:783373
InParanoid:A6QLS9 NextBio:20926051 Uniprot:A6QLS9
Length = 200
Score = 313 (115.2 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 65/178 (36%), Positives = 105/178 (58%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL V+
Sbjct: 122 NKCDMDDKRVVPK-GKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRKTPVK 177
>UNIPROTKB|F2Z4P9 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 UniGene:Cfa.3815
NextBio:20817448 CTD:10890 KO:K07903 OMA:WKSKCCS
GeneTree:ENSGT00700000104031 EMBL:AAEX03010790 EMBL:AAEX03010791
RefSeq:NP_001003277.2 ProteinModelPortal:F2Z4P9 SMR:F2Z4P9
PRIDE:F2Z4P9 Ensembl:ENSCAFT00000006816 GeneID:403958
KEGG:cfa:403958 Uniprot:F2Z4P9
Length = 200
Score = 313 (115.2 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 65/178 (36%), Positives = 105/178 (58%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL V+
Sbjct: 122 NKCDMDDKRVVPK-GKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRKTPVK 177
>UNIPROTKB|P61026 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0097051 "establishment of protein localization to
endoplasmic reticulum membrane" evidence=IMP] [GO:0072372 "primary
cilium" evidence=IDA] [GO:0016197 "endosomal transport"
evidence=IMP] [GO:0055037 "recycling endosome" evidence=IDA]
[GO:0061467 "basolateral protein localization" evidence=ISS]
[GO:0005768 "endosome" evidence=IDA] [GO:0032593
"insulin-responsive compartment" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0031489 "myosin V binding"
evidence=IPI] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0030859 "polarized epithelial cell
differentiation" evidence=ISS] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0032869
"cellular response to insulin stimulus" evidence=ISS] [GO:0072659
"protein localization to plasma membrane" evidence=ISS] [GO:0006893
"Golgi to plasma membrane transport" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0045200 "establishment of
neuroblast polarity" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
EMBL:CH471053 GO:GO:0030670 GO:GO:0032869 GO:GO:0016197
GO:GO:0055037 GO:GO:0007409 GO:GO:0005802 GO:GO:0072372
GO:GO:0072659 PROSITE:PS51419 GO:GO:0032593 GO:GO:0043001
GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GO:GO:0045200 GO:GO:0030859 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
CTD:10890 KO:K07903 EMBL:AF086917 EMBL:AF297660 EMBL:AF106681
EMBL:AL136650 EMBL:AK023223 EMBL:AF498945 EMBL:CR457303
EMBL:BC000896 IPI:IPI00016513 RefSeq:NP_057215.3 UniGene:Hs.467960
ProteinModelPortal:P61026 SMR:P61026 IntAct:P61026
MINT:MINT-1404404 STRING:P61026 PhosphoSite:P61026 DMDM:46577638
PaxDb:P61026 PeptideAtlas:P61026 PRIDE:P61026 DNASU:10890
Ensembl:ENST00000264710 GeneID:10890 KEGG:hsa:10890 UCSC:uc002rgv.3
GeneCards:GC02P026256 HGNC:HGNC:9759 HPA:HPA045611 MIM:612672
neXtProt:NX_P61026 PharmGKB:PA34100 InParanoid:P61026 OMA:WKSKCCS
PhylomeDB:P61026 ChiTaRS:RAB10 GenomeRNAi:10890 NextBio:41349
ArrayExpress:P61026 Bgee:P61026 CleanEx:HS_RAB10
Genevestigator:P61026 Uniprot:P61026
Length = 200
Score = 313 (115.2 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 65/178 (36%), Positives = 105/178 (58%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL V+
Sbjct: 122 NKCDMDDKRVVPK-GKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRKTPVK 177
>UNIPROTKB|F2Z5F2 [details] [associations]
symbol:RAB10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] [GO:0072372 "primary cilium" evidence=IEA]
[GO:0055037 "recycling endosome" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0031489 "myosin
V binding" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 CTD:10890 KO:K07903 OMA:WKSKCCS
GeneTree:ENSGT00700000104031 EMBL:CU571288 RefSeq:NP_001229989.1
UniGene:Ssc.5049 ProteinModelPortal:F2Z5F2 SMR:F2Z5F2 PRIDE:F2Z5F2
Ensembl:ENSSSCT00000009379 GeneID:100526104 KEGG:ssc:100526104
ArrayExpress:F2Z5F2 Uniprot:F2Z5F2
Length = 200
Score = 313 (115.2 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 65/178 (36%), Positives = 105/178 (58%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL V+
Sbjct: 122 NKCDMDDKRVVPK-GKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRKTPVK 177
>UNIPROTKB|Q5R5U1 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9601
"Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS] [GO:0005768
"endosome" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0005802 "trans-Golgi network" evidence=ISS] [GO:0006893 "Golgi
to plasma membrane transport" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016192 "vesicle-mediated
transport" evidence=ISS] [GO:0016197 "endosomal transport"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0030859
"polarized epithelial cell differentiation" evidence=ISS]
[GO:0032593 "insulin-responsive compartment" evidence=ISS]
[GO:0032869 "cellular response to insulin stimulus" evidence=ISS]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=ISS] [GO:0045200 "establishment of neuroblast polarity"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0061467 "basolateral protein localization" evidence=ISS]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=ISS]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
[GO:0097051 "establishment of protein localization to endoplasmic
reticulum membrane" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 HSSP:P55258
CTD:10890 KO:K07903 EMBL:CR859178 EMBL:CR860762
RefSeq:NP_001126682.1 UniGene:Pab.18148 ProteinModelPortal:Q5R5U1
SMR:Q5R5U1 PRIDE:Q5R5U1 GeneID:100173682 KEGG:pon:100173682
InParanoid:Q5R5U1 Uniprot:Q5R5U1
Length = 200
Score = 313 (115.2 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 65/178 (36%), Positives = 105/178 (58%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL V+
Sbjct: 122 NKCDMDDKRVVPK-GKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRKTPVK 177
>MGI|MGI:105066 [details] [associations]
symbol:Rab10 "RAB10, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005768 "endosome"
evidence=ISO] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO;IDA]
[GO:0005802 "trans-Golgi network" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0006893 "Golgi to plasma membrane
transport" evidence=ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016192 "vesicle-mediated
transport" evidence=IMP] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0031489 "myosin V binding"
evidence=ISO] [GO:0032593 "insulin-responsive compartment"
evidence=ISO] [GO:0032869 "cellular response to insulin stimulus"
evidence=IMP] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045200 "establishment of neuroblast polarity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0055037 "recycling endosome" evidence=ISO] [GO:0071782
"endoplasmic reticulum tubular network" evidence=ISO] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=ISO]
[GO:0072372 "primary cilium" evidence=ISO;IDA] [GO:0072659 "protein
localization to plasma membrane" evidence=IMP] [GO:0097051
"establishment of protein localization to endoplasmic reticulum
membrane" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105066 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
Reactome:REACT_147847 GO:GO:0007264 GO:GO:0030670 GO:GO:0032869
GO:GO:0016197 GO:GO:0055037 GO:GO:0007409 GO:GO:0005802
GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419 GO:GO:0032593
GO:GO:0043001 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 CTD:10890 KO:K07903 OMA:WKSKCCS ChiTaRS:RAB10
EMBL:AF035646 EMBL:AK008725 EMBL:AK028320 EMBL:AK087964
EMBL:BC056374 IPI:IPI00130118 RefSeq:NP_057885.1 UniGene:Mm.378993
ProteinModelPortal:P61027 SMR:P61027 IntAct:P61027 STRING:P61027
PhosphoSite:P61027 PaxDb:P61027 PRIDE:P61027
Ensembl:ENSMUST00000021001 GeneID:19325 KEGG:mmu:19325
InParanoid:P61027 NextBio:296287 Bgee:P61027 CleanEx:MM_RAB10
Genevestigator:P61027 GermOnline:ENSMUSG00000020671 Uniprot:P61027
Length = 200
Score = 313 (115.2 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 65/178 (36%), Positives = 105/178 (58%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL V+
Sbjct: 122 NKCDMDDKRVVPK-GKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRKTPVK 177
>POMBASE|SPBC405.04c [details] [associations]
symbol:ypt7 "GTPase Ypt7" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005525 "GTP binding" evidence=IC] [GO:0005634
"nucleus" evidence=IDA] [GO:0005773 "vacuole" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0006896 "Golgi to vacuole
transport" evidence=ISS] [GO:0007035 "vacuolar acidification"
evidence=IGI] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IMP] [GO:0031321 "ascospore-type prospore assembly"
evidence=IMP] [GO:0042144 "vacuole fusion, non-autophagic"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0051469 "vesicle fusion with vacuole"
evidence=IMP] [GO:0061191 "positive regulation of vacuole fusion,
non-autophagic" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPBC405.04c GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005634 GO:GO:0005773 GO:GO:0006886 GO:GO:0007264
EMBL:CU329671 GO:GO:0003924 GenomeReviews:CU329671_GR GO:GO:0030100
PROSITE:PS51419 GO:GO:0006896 eggNOG:COG1100 GO:GO:0045324
GO:GO:0007035 GO:GO:0042144 GO:GO:0031321 GO:GO:0051469
HOGENOM:HOG000233968 KO:K07897 OMA:SPRDPEH PIR:T40425
RefSeq:NP_596307.1 ProteinModelPortal:O94655 SMR:O94655
STRING:O94655 PRIDE:O94655 EnsemblFungi:SPBC405.04c.1
GeneID:2540763 KEGG:spo:SPBC405.04c OrthoDB:EOG48WGB7
NextBio:20801882 GO:GO:0061191 Uniprot:O94655
Length = 205
Score = 313 (115.2 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 72/213 (33%), Positives = 119/213 (55%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K++ L K++++GE G GKTSI+ +YV++ FS Y+ATIG DF K + D + ++ L
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVD-DKVVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +V+DV + +F+ + W+ + + + + P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+LL NK D ++ + +K F + +FETSAK+ IN+ +A +T+ + LEN
Sbjct: 120 FILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALEN- 178
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ D A L+ SQ+T +C C
Sbjct: 179 --MDSDDIAADFTDPIHLDMESQKT----SCYC 205
>UNIPROTKB|P18067 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0090385 "phagosome-lysosome fusion" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0045022
"early endosome to late endosome transport" evidence=IMP]
[GO:0007174 "epidermal growth factor catabolic process"
evidence=IMP] [GO:0005770 "late endosome" evidence=ISS] [GO:0042470
"melanosome" evidence=IEA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0008333 "endosome to
lysosome transport" evidence=IEA] [GO:0006622 "protein targeting to
lysosome" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0003924
GO:GO:0005764 GO:GO:0005770 GO:GO:0033365 GO:GO:0008333
PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 KO:K07897
OrthoDB:EOG4QFWF4 EMBL:M35522 PIR:B30413 RefSeq:NP_001003316.1
UniGene:Cfa.45048 ProteinModelPortal:P18067 SMR:P18067
STRING:P18067 PRIDE:P18067 Ensembl:ENSCAFT00000038482 GeneID:404007
KEGG:cfa:404007 GeneTree:ENSGT00700000104345 InParanoid:P18067
OMA:SPRDPEH BindingDB:P18067 NextBio:20817494 GO:GO:0007174
Uniprot:P18067
Length = 207
Score = 312 (114.9 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 69/214 (32%), Positives = 123/214 (57%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + K +N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQAWCYSK-NNIP-YFETSAKEAINVEQAFQTIARNALKQE 177
Query: 631 -KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+V+ + E + L++N + + +C+C
Sbjct: 178 TEVELYNEF---PEPI-KLDKNDRAKTSAESCSC 207
>UNIPROTKB|P24409 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019003 "GDP binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0045200 "establishment of
neuroblast polarity" evidence=ISS] [GO:0007409 "axonogenesis"
evidence=ISS] [GO:0006893 "Golgi to plasma membrane transport"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0032593 "insulin-responsive compartment"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0030859 "polarized epithelial cell
differentiation" evidence=IMP] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0055037 "recycling endosome"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0000145 "exocyst" evidence=IDA] [GO:0072372 "primary cilium"
evidence=IDA] [GO:0061467 "basolateral protein localization"
evidence=IMP] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0030670 GO:GO:0032869 GO:GO:0016197 GO:GO:0055037
GO:GO:0007409 GO:GO:0005802 GO:GO:0072372 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032593 GO:GO:0043001 GO:GO:0055038
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0045200
GO:GO:0030859 HOGENOM:HOG000233968 EMBL:X56387 PIR:D36364
UniGene:Cfa.3815 ProteinModelPortal:P24409 SMR:P24409 STRING:P24409
PRIDE:P24409 InParanoid:P24409 OrthoDB:EOG4K3KX6 NextBio:20817448
Uniprot:P24409
Length = 200
Score = 312 (114.9 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 65/178 (36%), Positives = 105/178 (58%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL V+
Sbjct: 122 NKCDMDDKRVVPK-GKGEQIAREHGIR-FFETSAKVNINIEKAFLTLAEDILRKTPVK 177
>UNIPROTKB|P51149 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0045453 "bone resorption"
evidence=IEA] [GO:0048365 "Rac GTPase binding" evidence=IEA]
[GO:0097208 "alveolar lamellar body" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0042470
"melanosome" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0090383 "phagosome acidification" evidence=IMP]
[GO:0090385 "phagosome-lysosome fusion" evidence=IMP] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0045022 "early endosome to
late endosome transport" evidence=IMP] [GO:0015031 "protein
transport" evidence=TAS] [GO:0005770 "late endosome" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=TAS] [GO:0005764
"lysosome" evidence=IDA] [GO:0006897 "endocytosis" evidence=TAS]
[GO:0005765 "lysosomal membrane" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0006622 "protein targeting to lysosome"
evidence=IMP] [GO:0005525 "GTP binding" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0008333 "endosome to lysosome transport"
evidence=IMP] [GO:0007174 "epidermal growth factor catabolic
process" evidence=IMP] [GO:0006184 "GTP catabolic process"
evidence=IDA;TAS] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0042470
Reactome:REACT_6900 GO:GO:0007264 GO:GO:0045335
Pathway_Interaction_DB:il12_2pathway GO:GO:0005765 GO:GO:0019886
EMBL:CH471052 GO:GO:0003924 GO:GO:0006897 GO:GO:0005770
GO:GO:0008333 PROSITE:PS51419 GO:GO:0045022 GO:GO:0006622
eggNOG:COG1100 GO:GO:0019003 GO:GO:0090382 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:7879 KO:K07897 OrthoDB:EOG4QFWF4
OMA:SPRDPEH GO:GO:0007174 EMBL:X93499 EMBL:U44104 EMBL:AF050175
EMBL:AF498942 EMBL:AK000826 EMBL:AK290721 EMBL:BC008721
IPI:IPI00016342 PIR:JC5268 RefSeq:NP_004628.4 UniGene:Hs.741172
PDB:1T91 PDB:1YHN PDB:3LAW PDBsum:1T91 PDBsum:1YHN PDBsum:3LAW
ProteinModelPortal:P51149 SMR:P51149 DIP:DIP-39879N IntAct:P51149
MINT:MINT-4999676 STRING:P51149 PhosphoSite:P51149 DMDM:1709999
PaxDb:P51149 PeptideAtlas:P51149 PRIDE:P51149 DNASU:7879
Ensembl:ENST00000265062 GeneID:7879 KEGG:hsa:7879 UCSC:uc003eks.1
GeneCards:GC03P128444 HGNC:HGNC:9788 HPA:HPA006964 MIM:600882
MIM:602298 neXtProt:NX_P51149 Orphanet:99936 PharmGKB:PA162400619
InParanoid:P51149 PhylomeDB:P51149 ChiTaRS:RAB7A
EvolutionaryTrace:P51149 GenomeRNAi:7879 NextBio:30336
ArrayExpress:P51149 Bgee:P51149 CleanEx:HS_RAB7A
Genevestigator:P51149 GermOnline:ENSG00000075785 Uniprot:P51149
Length = 207
Score = 312 (114.9 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 69/214 (32%), Positives = 123/214 (57%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + K +N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQAWCYSK-NNIP-YFETSAKEAINVEQAFQTIARNALKQE 177
Query: 631 -KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+V+ + E + L++N + + +C+C
Sbjct: 178 TEVELYNEF---PEPI-KLDKNDRAKASAESCSC 207
>UNIPROTKB|Q5R9Y4 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9601
"Pongo abelii" [GO:0005770 "late endosome" evidence=ISS]
[GO:0045022 "early endosome to late endosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 HOVERGEN:HBG009351
CTD:7879 KO:K07897 EMBL:CR859246 RefSeq:NP_001127416.1
UniGene:Pab.19044 HSSP:P09527 ProteinModelPortal:Q5R9Y4 SMR:Q5R9Y4
PRIDE:Q5R9Y4 GeneID:100174486 KEGG:pon:100174486 Uniprot:Q5R9Y4
Length = 207
Score = 312 (114.9 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 68/213 (31%), Positives = 119/213 (55%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + K +N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRQVATKRAQAWCYSK-NNIP-YFETSAKEAINVEQAFQTIARNAL--- 174
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K + + + L++N + + +C+C
Sbjct: 175 KQETEVELYNEFPKPIKLDKNDRAKASAESCSC 207
>MGI|MGI:105068 [details] [associations]
symbol:Rab7 "RAB7, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005764 "lysosome"
evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0005770
"late endosome" evidence=ISO;IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006622 "protein targeting to lysosome" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0007174 "epidermal growth
factor catabolic process" evidence=ISO] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008333 "endosome
to lysosome transport" evidence=ISO] [GO:0015031 "protein
transport" evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031410 "cytoplasmic vesicle" evidence=ISO] [GO:0045022 "early
endosome to late endosome transport" evidence=ISO] [GO:0045335
"phagocytic vesicle" evidence=ISO] [GO:0045453 "bone resorption"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0090383 "phagosome acidification" evidence=ISO] [GO:0090385
"phagosome-lysosome fusion" evidence=ISO] [GO:0097208 "alveolar
lamellar body" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105068 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0042470 GO:GO:0006886 GO:GO:0007264 GO:GO:0045335
GO:GO:0003924 GO:GO:0005764 GO:GO:0005770 GO:GO:0033365
GO:GO:0008333 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968 KO:K07897
OrthoDB:EOG4QFWF4 OMA:SPRDPEH GO:GO:0007174 EMBL:X89650
EMBL:AK005004 EMBL:BC004597 EMBL:BC086793 IPI:IPI00408892
PIR:S62733 RefSeq:NP_033031.2 UniGene:Mm.333233 UniGene:Mm.486309
ProteinModelPortal:P51150 SMR:P51150 STRING:P51150
PhosphoSite:P51150 PaxDb:P51150 PRIDE:P51150
Ensembl:ENSMUST00000095048 Ensembl:ENSMUST00000113596
Ensembl:ENSMUST00000113597 Ensembl:ENSMUST00000113598
Ensembl:ENSMUST00000113600 GeneID:19349 KEGG:mmu:19349 CTD:19349
InParanoid:P51150 NextBio:296377 Bgee:P51150 CleanEx:MM_RAB7
Genevestigator:P51150 Uniprot:P51150
Length = 207
Score = 312 (114.9 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 69/214 (32%), Positives = 123/214 (57%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + K +N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQAWCYSK-NNIP-YFETSAKEAINVEQAFQTIARNALKQE 177
Query: 631 -KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+V+ + E + L++N + + +C+C
Sbjct: 178 TEVELYNEF---PEPI-KLDKNDRAKASAESCSC 207
>RGD|61908 [details] [associations]
symbol:Rab7a "RAB7A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005770 "late endosome"
evidence=ISO;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006622 "protein targeting to lysosome" evidence=IEA;ISO]
[GO:0007174 "epidermal growth factor catabolic process"
evidence=IEA;ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;IDA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0042470 "melanosome" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0045022 "early
endosome to late endosome transport" evidence=ISO;ISS] [GO:0045335
"phagocytic vesicle" evidence=ISO;ISS] [GO:0045453 "bone resorption"
evidence=IMP] [GO:0048365 "Rac GTPase binding" evidence=IPI]
[GO:0090383 "phagosome acidification" evidence=ISO;ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISO;ISS] [GO:0097208 "alveolar
lamellar body" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:61908 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0003924
GO:GO:0005764 GO:GO:0097208 GO:GO:0005770 GO:GO:0045453
PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 KO:K07897
OrthoDB:EOG4QFWF4 GeneTree:ENSGT00700000104345 OMA:SPRDPEH
EMBL:X12535 EMBL:AF286535 EMBL:AB158427 EMBL:AB158428 EMBL:BC072470
IPI:IPI00215564 PIR:S01934 RefSeq:NP_076440.1 UniGene:Rn.1425
PDB:1VG0 PDB:1VG1 PDB:1VG8 PDB:1VG9 PDBsum:1VG0 PDBsum:1VG1
PDBsum:1VG8 PDBsum:1VG9 ProteinModelPortal:P09527 SMR:P09527
IntAct:P09527 MINT:MINT-1775656 STRING:P09527 PhosphoSite:P09527
PRIDE:P09527 Ensembl:ENSRNOT00000016432 GeneID:29448 KEGG:rno:29448
UCSC:RGD:61908 InParanoid:P09527 EvolutionaryTrace:P09527
NextBio:609213 Genevestigator:P09527 GermOnline:ENSRNOG00000012247
Uniprot:P09527
Length = 207
Score = 312 (114.9 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 69/214 (32%), Positives = 123/214 (57%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + K +N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQAWCYSK-NNIP-YFETSAKEAINVEQAFQTIARNALKQE 177
Query: 631 -KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+V+ + E + L++N + + +C+C
Sbjct: 178 TEVELYNEF---PEPI-KLDKNERAKASAESCSC 207
>ZFIN|ZDB-GENE-040426-1352 [details] [associations]
symbol:rab7 "RAB7, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040426-1352 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P35278 KO:K07897
OrthoDB:EOG4QFWF4 GeneTree:ENSGT00700000104345 CTD:19349
OMA:FETSAKV EMBL:CR854846 EMBL:BC054602 EMBL:BC155202
IPI:IPI00486424 RefSeq:NP_957222.1 UniGene:Dr.12260 SMR:Q7T2C6
STRING:Q7T2C6 Ensembl:ENSDART00000027014 GeneID:393902
KEGG:dre:393902 InParanoid:Q7T2C6 NextBio:20814880 Uniprot:Q7T2C6
Length = 207
Score = 312 (114.9 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 68/214 (31%), Positives = 120/214 (56%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQA--WCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 631 -KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+V+ + E + L+RN + + C+C
Sbjct: 178 TEVELYNEF---PEPI-KLDRNDRAKPSAETCSC 207
>UNIPROTKB|F1NMT5 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0031489 "myosin V binding" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] [GO:0072372 "primary cilium"
evidence=IEA] [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 OMA:WKSKCCS GeneTree:ENSGT00700000104031
EMBL:AADN02018422 EMBL:AADN02018423 EMBL:AADN02018424
EMBL:AADN02018425 EMBL:AADN02018426 EMBL:AADN02018427
IPI:IPI00818237 Ensembl:ENSGALT00000036791 Uniprot:F1NMT5
Length = 200
Score = 311 (114.5 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 66/176 (37%), Positives = 105/176 (59%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L+K+L+IG+ GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD AG
Sbjct: 9 LFKLLLIGDSQVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDTAG 67
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL NK
Sbjct: 68 QERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLGNK 123
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
CD + + AK ++ +EH +FETSAK NINI+ A TL + IL V+
Sbjct: 124 CDMEDKRVVPK-AKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRKTPVK 177
>UNIPROTKB|F1MJQ1 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9913 "Bos
taurus" [GO:0045022 "early endosome to late endosome transport"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0008333
"endosome to lysosome transport" evidence=IEA] [GO:0007174
"epidermal growth factor catabolic process" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005764 GO:GO:0005770
GO:GO:0033365 GO:GO:0008333 GO:GO:0045022 GO:GO:0019003
IPI:IPI00704752 UniGene:Bt.41314 GeneTree:ENSGT00700000104345
OMA:SPRDPEH GO:GO:0007174 EMBL:DAAA02054678
Ensembl:ENSBTAT00000013451 Uniprot:F1MJQ1
Length = 207
Score = 311 (114.5 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 69/214 (32%), Positives = 122/214 (57%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + K +N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQAWCYSK-NNIP-YFETSAKEAINVEQAFQTIARNALKQE 177
Query: 631 -KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+V+ + E + L++N + + C+C
Sbjct: 178 TEVELYNEF---PEPI-KLDKNDRTKPSAEGCSC 207
>UNIPROTKB|F1PWY4 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030141 "secretory granule" evidence=IEA]
[GO:0018125 "peptidyl-cysteine methylation" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0008021
"synaptic vesicle" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0030141 GO:GO:0017157 GO:GO:0018125
GeneTree:ENSGT00690000101942 OMA:WFDFFEA EMBL:AAEX03009711
EMBL:AAEX03009710 Ensembl:ENSCAFT00000039721 Uniprot:F1PWY4
Length = 243
Score = 311 (114.5 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 69/212 (32%), Positives = 119/212 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + HE ++LQ+WD
Sbjct: 44 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 102
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 103 AGQERYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWATQI--KTYSWDNAQV--ILVG 158
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD +E + P + + E +FE SAK+NI++ A + LV I DK+
Sbjct: 159 NKCDMEEERVV--PTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAIC--DKMS-- 212
Query: 636 GDSHATSEAVFSLNRNSQETKNG----RNCAC 663
DS T + ++N++ + +NC+C
Sbjct: 213 -DSLDTDPSTLGTSKNTRLSDTPPLLQQNCSC 243
>SGD|S000001856 [details] [associations]
symbol:YPT1 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0006461 "protein complex assembly" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0048211
"Golgi vesicle docking" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0000149 "SNARE binding" evidence=IDA;IPI]
[GO:0035494 "SNARE complex disassembly" evidence=IMP] [GO:0005795
"Golgi stack" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IMP] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP] [GO:0090114 "COPII-coated vesicle budding"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0000139
"Golgi membrane" evidence=IEA;IDA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IGI;IMP]
[GO:0048194 "Golgi vesicle budding" evidence=IGI] [GO:0034498
"early endosome to Golgi transport" evidence=IMP] [GO:0005802
"trans-Golgi network" evidence=IDA] [GO:0016236 "macroautophagy"
evidence=IMP] [GO:0032258 "CVT pathway" evidence=IMP] [GO:0000407
"pre-autophagosomal structure" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 SGD:S000001856 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0007264 GO:GO:0000139 GO:GO:0006461
GO:GO:0005789 GO:GO:0003924 GO:GO:0005795 EMBL:D50617 EMBL:BK006940
GO:GO:0005802 PROSITE:PS51419 GO:GO:0048194 GO:GO:0032456
GO:GO:0016236 eggNOG:COG1100 GO:GO:0006890 GO:GO:0032258
GO:GO:0000407 GO:GO:0034498 PDB:3CUE PDBsum:3CUE GO:GO:0000149
PDB:1UKV PDB:2BCG PDBsum:1UKV PDBsum:2BCG HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 KO:K07874 OMA:MIMASEI GO:GO:0090114
GO:GO:0035494 GO:GO:0048211 EMBL:X00209 OrthoDB:EOG49W5QK
EMBL:AY558467 PIR:S56216 RefSeq:NP_116615.1 PDB:1YZN PDBsum:1YZN
ProteinModelPortal:P01123 SMR:P01123 DIP:DIP-2019N IntAct:P01123
MINT:MINT-389361 STRING:P01123 PaxDb:P01123 PeptideAtlas:P01123
PRIDE:P01123 EnsemblFungi:YFL038C GeneID:850505 KEGG:sce:YFL038C
CYGD:YFL038c EvolutionaryTrace:P01123 NextBio:966209
Genevestigator:P01123 GermOnline:YFL038C Uniprot:P01123
Length = 206
Score = 311 (114.5 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 74/213 (34%), Positives = 121/213 (56%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+DVT +F+ V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT----STVL 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ NKCD + K + + AK EF + N + ETSA D+ N++DA T+ ++I E+
Sbjct: 116 KLLVGNKCDLKDKRVVEYDVAK--EFA-DANKMPFLETSALDSTNVEDAFLTMARQIKES 172
Query: 630 DKVQANGDSHATSEAVFSLNRNSQE-TKNGRNC 661
Q ++ E ++N Q T G C
Sbjct: 173 MSQQNLNETTQKKEDKGNVNLKGQSLTNTGGGC 205
>UNIPROTKB|P10948 [details] [associations]
symbol:RAB3B "Ras-related protein Rab-3B" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0030141
"secretory granule" evidence=IEA] [GO:0018125 "peptidyl-cysteine
methylation" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0030141 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157 GO:GO:0018125
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6
EMBL:M19886 EMBL:BC122723 IPI:IPI00713862 PIR:B29224
RefSeq:NP_776872.1 UniGene:Bt.388 ProteinModelPortal:P10948
SMR:P10948 PRIDE:P10948 Ensembl:ENSBTAT00000007019 GeneID:282030
KEGG:bta:282030 CTD:5865 InParanoid:P10948 KO:K06108 OMA:WFDFFEA
NextBio:20805893 Uniprot:P10948
Length = 219
Score = 310 (114.2 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 68/212 (32%), Positives = 120/212 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + HE ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI--KTYSWDNAQV--ILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD +E + P + + E +FE SAK+NI++ A + LV I DK+
Sbjct: 135 NKCDMEEERVV--PTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAIC--DKMS-- 188
Query: 636 GDSHATSEAVFSLNRNSQETKNG----RNCAC 663
D+ T ++ ++N++ + +NC+C
Sbjct: 189 -DTLDTDPSLLGTSKNTRLSDTPPLLQQNCSC 219
>RGD|620922 [details] [associations]
symbol:Rab3b "RAB3B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=NAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=ISO;TAS]
[GO:0018125 "peptidyl-cysteine methylation" evidence=IEA;ISO]
[GO:0030141 "secretory granule" evidence=IEA;ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:620922 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0030141 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157 GO:GO:0018125
OrthoDB:EOG4TB4C6 CTD:5865 KO:K06108 EMBL:Y14019 EMBL:S68807
IPI:IPI00470247 PIR:I53485 RefSeq:NP_112353.1 UniGene:Rn.3788
UniGene:Rn.9822 ProteinModelPortal:Q63941 SMR:Q63941 STRING:Q63941
PRIDE:Q63941 GeneID:81755 KEGG:rno:81755 InParanoid:Q63941
NextBio:615522 ArrayExpress:Q63941 Genevestigator:Q63941
GermOnline:ENSRNOG00000008001 Uniprot:Q63941
Length = 219
Score = 310 (114.2 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 69/212 (32%), Positives = 119/212 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + HE ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI--KTYSWDNAQV--ILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD +E + P + + E +FE SAK+NI++ A + LV I DK+
Sbjct: 135 NKCDMEEERVI--PTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAIC--DKMS-- 188
Query: 636 GDSHATSEAVFSLNRNSQETKNG----RNCAC 663
DS T +V ++ ++ + +NC+C
Sbjct: 189 -DSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
>RGD|620880 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0005911 "cell-cell junction" evidence=ISO] [GO:0005923 "tight
junction" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] Reactome:REACT_97881 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620880 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0005923 GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:AF525280 EMBL:M83678 IPI:IPI00202697 PIR:D42148
RefSeq:NP_112354.1 UniGene:Rn.9819 ProteinModelPortal:P35286
SMR:P35286 IntAct:P35286 MINT:MINT-2982767 STRING:P35286
PhosphoSite:P35286 PRIDE:P35286 Ensembl:ENSRNOT00000022627
GeneID:81756 KEGG:rno:81756 UCSC:RGD:620880 InParanoid:P35286
NextBio:615526 Genevestigator:P35286 GermOnline:ENSRNOG00000016733
Uniprot:P35286
Length = 203
Score = 309 (113.8 bits), Expect = 4.3e-27, P = 4.3e-27
Identities = 70/208 (33%), Positives = 117/208 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +LQ+WD
Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRI-KLQVWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + W + + K G + +LL
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSI--KENASAG--VERLLLG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKCD + K + A + +EH +FETSAK ++N+D+A +L + IL +
Sbjct: 121 NKCDMEAKRKVQREQA--ERLAREHRIR-FFETSAKSSVNVDEAFSSLARDILLKTGGRR 177
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNCA 662
+G+S S S + + KN C+
Sbjct: 178 SGNSSKPS----STDLKVSDKKNSNKCS 201
>UNIPROTKB|F1NVC7 [details] [associations]
symbol:LOC771782 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA]
[GO:0034144 "negative regulation of toll-like receptor 4 signaling
pathway" evidence=IEA] [GO:0034164 "negative regulation of
toll-like receptor 9 signaling pathway" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 GO:GO:0034144 GeneTree:ENSGT00700000104345
OMA:LHQYVHK GO:GO:0034164 EMBL:AADN02044938 IPI:IPI00681453
ProteinModelPortal:F1NVC7 Ensembl:ENSGALT00000035212 Uniprot:F1NVC7
Length = 183
Score = 308 (113.5 bits), Expect = 5.5e-27, P = 5.5e-27
Identities = 67/172 (38%), Positives = 101/172 (58%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ KI++IG LG GKTS++ +YVH+ F YR T+G KV++ D +T ++L
Sbjct: 17 MDSSKKVDLKIIIIGALGVGKTSLLHQYVHKTFYEDYRTTLGASILTKVVAVD-KTPLKL 75
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD GQERF +M +YK + G + FDVT +F+A+ W+ D KV +P + P
Sbjct: 76 QIWDTGGQERFRSMVSTFYKGSDGCMLAFDVTDMESFEALDNWRDDFLEKV-IPRDHDFP 134
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTL 622
V+L NK D ++ A + KE + +FE SAK+NIN+ A +TL
Sbjct: 135 MVVLGNKIDLCDRQVSKEIASA--WCKEKDIP-YFEVSAKNNINVAQAFETL 183
>UNIPROTKB|P20336 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0001669 "acrosomal vesicle" evidence=IEA]
[GO:0001671 "ATPase activator activity" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0016079 "synaptic vesicle exocytosis"
evidence=IEA] [GO:0016188 "synaptic vesicle maturation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0048790 "maintenance of presynaptic active zone structure"
evidence=IEA] [GO:0050975 "sensory perception of touch"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0051117 "ATPase binding" evidence=IEA] [GO:0051602 "response to
electrical stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003924 "GTPase activity" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007269 "neurotransmitter
secretion" evidence=TAS] [GO:0014047 "glutamate secretion"
evidence=TAS] [GO:0060201 "clathrin-sculpted acetylcholine
transport vesicle membrane" evidence=TAS] [GO:0060203
"clathrin-sculpted glutamate transport vesicle membrane"
evidence=TAS] [GO:0061202 "clathrin-sculpted gamma-aminobutyric
acid transport vesicle membrane" evidence=TAS] [GO:0070083
"clathrin-sculpted monoamine transport vesicle membrane"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=IMP;TAS]
Reactome:REACT_13685 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0030324 GO:GO:0015031 GO:GO:0008021
GO:GO:0051602 GO:GO:0007274 GO:GO:0003924 GO:GO:0009791
GO:GO:0007409 GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671
GO:GO:0007005 EMBL:CH471106 GO:GO:0007269 GO:GO:0014047
GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351
GO:GO:0061202 GO:GO:0016188 EMBL:AC068499 GO:GO:0031630
HOGENOM:HOG000233968 CTD:5864 KO:K07882 OMA:QLTEQPA
OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:M28210 EMBL:AF157809
EMBL:AF157806 EMBL:AF157807 EMBL:AF157808 EMBL:AF254795
EMBL:AF498931 EMBL:AK289559 EMBL:BC011782 IPI:IPI00023504
PIR:C34323 RefSeq:NP_002857.1 UniGene:Hs.27744
ProteinModelPortal:P20336 SMR:P20336 IntAct:P20336 STRING:P20336
PhosphoSite:P20336 DMDM:131801 PaxDb:P20336 PRIDE:P20336 DNASU:5864
Ensembl:ENST00000222256 GeneID:5864 KEGG:hsa:5864 UCSC:uc002nie.2
GeneCards:GC19M018307 HGNC:HGNC:9777 HPA:CAB009949 HPA:HPA003160
MIM:179490 neXtProt:NX_P20336 PharmGKB:PA34132 InParanoid:P20336
PhylomeDB:P20336 GenomeRNAi:5864 NextBio:22774 Bgee:P20336
CleanEx:HS_RAB3A Genevestigator:P20336 GermOnline:ENSG00000105649
GO:GO:0060201 GO:GO:0060203 GO:GO:0070083 Uniprot:P20336
Length = 220
Score = 308 (113.5 bits), Expect = 5.5e-27, P = 5.5e-27
Identities = 67/208 (32%), Positives = 113/208 (54%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--LLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E +
Sbjct: 135 NKCDMEDERVVSSER--GRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLD 192
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
A + A + Q+ ++CAC
Sbjct: 193 TADPAVTGAKQGPQLSDQQVPPHQDCAC 220
>UNIPROTKB|F1RFW5 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 EMBL:CU407290
RefSeq:XP_001927266.2 UniGene:Ssc.27516 Ensembl:ENSSSCT00000007191
GeneID:100154707 KEGG:ssc:100154707 Uniprot:F1RFW5
Length = 203
Score = 308 (113.5 bits), Expect = 5.5e-27, P = 5.5e-27
Identities = 70/208 (33%), Positives = 118/208 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +LQ+WD
Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KLQVWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + W + + K G + +LL
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSI--KENASAG--VERLLLG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL +++
Sbjct: 121 NKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL----LKS 173
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNCA 662
G S S + + + KN C+
Sbjct: 174 GGRRLGNSNKPHSTDLKTCDKKNTNKCS 201
>CGD|CAL0001430 [details] [associations]
symbol:YPT1 species:5476 "Candida albicans" [GO:0009306
"protein secretion" evidence=IGI;IMP] [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0035690 "cellular response
to drug" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IMP]
[GO:0005795 "Golgi stack" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000407
"pre-autophagosomal structure" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0034498 "early endosome to Golgi transport" evidence=IEA]
[GO:0048211 "Golgi vesicle docking" evidence=IEA] [GO:0032258 "CVT
pathway" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0035494 "SNARE complex disassembly" evidence=IEA]
[GO:0090114 "COPII-coated vesicle budding" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0048194 "Golgi vesicle budding" evidence=IEA]
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IEA] [GO:0032456 "endocytic recycling" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] [GO:0000149 "SNARE binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 CGD:CAL0001430
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:AACQ01000017 EMBL:AACQ01000015 GO:GO:0009306 GO:GO:0035690
GO:GO:0006888 eggNOG:COG1100 GO:GO:0000390 HOGENOM:HOG000233968
KO:K07874 RefSeq:XP_721279.1 RefSeq:XP_721550.1
ProteinModelPortal:Q5AI00 SMR:Q5AI00 STRING:Q5AI00 GeneID:3636915
GeneID:3637145 KEGG:cal:CaO19.10570 KEGG:cal:CaO19.3052
Uniprot:Q5AI00
Length = 207
Score = 307 (113.1 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 73/214 (34%), Positives = 119/214 (55%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ ++L+K+L+IG+ G GK+ ++ R+ ++P Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G IV+DVT +F+ V +W Q++D T G +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYAT---GGVMK 116
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+L+ NK D + I A EF + + ETSA + N++ A T+ ++I
Sbjct: 117 -LLVGNKADLSDKKIVEYTAA-KEFADALDIP-FLETSALSSTNVEQAFYTMARQIKAQM 173
Query: 631 KVQANGDSHATSEAVFSLN-RNSQETKNGRNCAC 663
AN + A ++ ++N R T N N C
Sbjct: 174 TNNANAGNAANAKGKSNVNLRGESLTSNQSNSCC 207
>UNIPROTKB|E1C0F3 [details] [associations]
symbol:RAB7A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006622 "protein targeting to
lysosome" evidence=IEA] [GO:0007174 "epidermal growth factor
catabolic process" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
[GO:0045022 "early endosome to late endosome transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005764 GO:GO:0005770
GO:GO:0033365 GO:GO:0008333 GO:GO:0045022 GO:GO:0019003 CTD:7879
KO:K07897 GeneTree:ENSGT00700000104345 OMA:SPRDPEH GO:GO:0007174
EMBL:AADN02014058 EMBL:AADN02014057 IPI:IPI00601244
RefSeq:XP_003642026.1 RefSeq:XP_414359.1 UniGene:Gga.5872
PRIDE:E1C0F3 Ensembl:ENSGALT00000009495 GeneID:416016
KEGG:gga:416016 NextBio:20819533 Uniprot:E1C0F3
Length = 207
Score = 307 (113.1 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 68/214 (31%), Positives = 122/214 (57%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + K +N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQAWCYSK-NNIP-YFETSAKEAINVEQAFQTIARNALKQE 177
Query: 631 -KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+V+ + E + L++N + + +C+C
Sbjct: 178 TEVELYNEF---PEPI-KLDKNDRVKASAESCSC 207
>UNIPROTKB|F1NI30 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0031489 "myosin V binding" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] [GO:0072372 "primary cilium"
evidence=IEA] [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 IPI:IPI00593138 GeneTree:ENSGT00700000104031
EMBL:AADN02018422 EMBL:AADN02018423 EMBL:AADN02018424
EMBL:AADN02018425 EMBL:AADN02018426 EMBL:AADN02018427
Ensembl:ENSGALT00000026683 Uniprot:F1NI30
Length = 191
Score = 307 (113.1 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 65/175 (37%), Positives = 104/175 (59%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
+K+L+IG+ GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD AGQ
Sbjct: 1 FKLLLIGDSQVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDTAGQ 59
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL NKC
Sbjct: 60 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLGNKC 115
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
D + + AK ++ +EH +FETSAK NINI+ A TL + IL V+
Sbjct: 116 DMEDKRVVPK-AKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRKTPVK 168
>UNIPROTKB|P11023 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9913 "Bos
taurus" [GO:0050975 "sensory perception of touch" evidence=ISS]
[GO:0016188 "synaptic vesicle maturation" evidence=ISS] [GO:0007274
"neuromuscular synaptic transmission" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0051602 "response to electrical
stimulus" evidence=ISS] [GO:0048790 "maintenance of presynaptic
active zone structure" evidence=ISS] [GO:0031630 "regulation of
synaptic vesicle fusion to presynaptic membrane" evidence=ISS]
[GO:0030324 "lung development" evidence=ISS] [GO:0017157
"regulation of exocytosis" evidence=ISS] [GO:0016079 "synaptic
vesicle exocytosis" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0008021 "synaptic vesicle"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0003016 "respiratory
system process" evidence=ISS] [GO:0016020 "membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001669 "acrosomal
vesicle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0016020
GO:GO:0030324 GO:GO:0015031 GO:GO:0008021 GO:GO:0051602
GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0007005 GO:GO:0016079
eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351 GO:GO:0016188
GO:GO:0031630 HOGENOM:HOG000233968 EMBL:M19885 EMBL:BC118278
IPI:IPI00703436 PIR:A29224 RefSeq:NP_776871.2 UniGene:Bt.2362
ProteinModelPortal:P11023 SMR:P11023 STRING:P11023 PRIDE:P11023
Ensembl:ENSBTAT00000014062 GeneID:282029 KEGG:bta:282029 CTD:5864
GeneTree:ENSGT00690000101942 InParanoid:P11023 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 NextBio:20805892 GO:GO:0048790
Uniprot:P11023
Length = 220
Score = 307 (113.1 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 67/208 (32%), Positives = 112/208 (53%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--LLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E +
Sbjct: 135 NKCDMEDERVVSSER--GRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLD 192
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
A + A Q+ ++CAC
Sbjct: 193 TADPAVTGAKQGPQLTDQQAPPHQDCAC 220
>UNIPROTKB|E2RIA5 [details] [associations]
symbol:RAB3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051602 "response to electrical stimulus"
evidence=IEA] [GO:0050975 "sensory perception of touch"
evidence=IEA] [GO:0048790 "maintenance of presynaptic active zone
structure" evidence=IEA] [GO:0031630 "regulation of synaptic
vesicle fusion to presynaptic membrane" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0016188 "synaptic vesicle
maturation" evidence=IEA] [GO:0016079 "synaptic vesicle exocytosis"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] [GO:0007274 "neuromuscular
synaptic transmission" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0001669 "acrosomal vesicle" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0030324
GO:GO:0015031 GO:GO:0008021 GO:GO:0051602 GO:GO:0007274
GO:GO:0003924 GO:GO:0009791 GO:GO:0007409 GO:GO:0003016
GO:GO:0007005 GO:GO:0016079 GO:GO:0050975 GO:GO:0016188
GO:GO:0031630 GeneTree:ENSGT00690000101942 OMA:QLTEQPA
GO:GO:0048790 EMBL:AAEX03012283 ProteinModelPortal:E2RIA5
PRIDE:E2RIA5 Ensembl:ENSCAFT00000023719 NextBio:20858896
Uniprot:E2RIA5
Length = 226
Score = 307 (113.1 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 67/208 (32%), Positives = 112/208 (53%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 26 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 84
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 85 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--LLVG 140
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E +
Sbjct: 141 NKCDMEDERVVSSER--GRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLD 198
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
A + A Q+ ++CAC
Sbjct: 199 TADPAVTGAKQGPQLTDQQAPPHQDCAC 226
>UNIPROTKB|F1S6G3 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101942 KO:K06108 EMBL:CU468046
RefSeq:XP_003128025.1 Ensembl:ENSSSCT00000026725 GeneID:100514585
KEGG:ssc:100514585 Uniprot:F1S6G3
Length = 219
Score = 307 (113.1 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 68/212 (32%), Positives = 120/212 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + E ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRQEKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI--KTYSWDNAQV--ILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD +E + P + + + E +FE SAK+NI++ A + LV I DK+
Sbjct: 135 NKCDMEEERVV--PTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAIC--DKMS-- 188
Query: 636 GDSHATSEAVFSLNRNSQETKNG----RNCAC 663
D+ T +V ++N++ + +NC+C
Sbjct: 189 -DTLDTDPSVLGTSKNTRLSDTPPLLQQNCSC 219
>UNIPROTKB|Q06AU3 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9823 "Sus
scrofa" [GO:0030324 "lung development" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0016079 "synaptic vesicle exocytosis"
evidence=ISS] [GO:0051602 "response to electrical stimulus"
evidence=ISS] [GO:0050975 "sensory perception of touch"
evidence=ISS] [GO:0048790 "maintenance of presynaptic active zone
structure" evidence=ISS] [GO:0031630 "regulation of synaptic
vesicle fusion to presynaptic membrane" evidence=ISS] [GO:0017157
"regulation of exocytosis" evidence=ISS] [GO:0016188 "synaptic
vesicle maturation" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0008021 "synaptic vesicle"
evidence=ISS] [GO:0007274 "neuromuscular synaptic transmission"
evidence=ISS] [GO:0007005 "mitochondrion organization"
evidence=ISS] [GO:0003016 "respiratory system process"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0001669 "acrosomal vesicle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0030324 GO:GO:0015031 GO:GO:0008021 GO:GO:0051602
GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0007005 GO:GO:0016079
eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351 GO:GO:0016188
GO:GO:0031630 HOGENOM:HOG000233968 CTD:5864
GeneTree:ENSGT00690000101942 KO:K07882 OMA:QLTEQPA
OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:DQ917632 RefSeq:NP_001116651.1
UniGene:Ssc.5969 ProteinModelPortal:Q06AU3 SMR:Q06AU3 PRIDE:Q06AU3
Ensembl:ENSSSCT00000015183 GeneID:100144498 KEGG:ssc:100144498
Uniprot:Q06AU3
Length = 220
Score = 307 (113.1 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 67/208 (32%), Positives = 112/208 (53%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--LLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E +
Sbjct: 135 NKCDMEDERVVSSER--GRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLD 192
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
A + A Q+ ++CAC
Sbjct: 193 TADPAVTGAKQGPQLTDQQAPPHQDCAC 220
>UNIPROTKB|Q5AI00 [details] [associations]
symbol:YPT1 "Likely RAB family GTP binding protein involved
in secretion" species:237561 "Candida albicans SC5314" [GO:0000390
"spliceosomal complex disassembly" evidence=ISS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0009306 "protein
secretion" evidence=IGI;IMP] [GO:0035690 "cellular response to
drug" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
CGD:CAL0001430 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 EMBL:AACQ01000017 EMBL:AACQ01000015 GO:GO:0009306
GO:GO:0035690 GO:GO:0006888 eggNOG:COG1100 GO:GO:0000390
HOGENOM:HOG000233968 KO:K07874 RefSeq:XP_721279.1
RefSeq:XP_721550.1 ProteinModelPortal:Q5AI00 SMR:Q5AI00
STRING:Q5AI00 GeneID:3636915 GeneID:3637145 KEGG:cal:CaO19.10570
KEGG:cal:CaO19.3052 Uniprot:Q5AI00
Length = 207
Score = 307 (113.1 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 73/214 (34%), Positives = 119/214 (55%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ ++L+K+L+IG+ G GK+ ++ R+ ++P Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G IV+DVT +F+ V +W Q++D T G +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYAT---GGVMK 116
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+L+ NK D + I A EF + + ETSA + N++ A T+ ++I
Sbjct: 117 -LLVGNKADLSDKKIVEYTAA-KEFADALDIP-FLETSALSSTNVEQAFYTMARQIKAQM 173
Query: 631 KVQANGDSHATSEAVFSLN-RNSQETKNGRNCAC 663
AN + A ++ ++N R T N N C
Sbjct: 174 TNNANAGNAANAKGKSNVNLRGESLTSNQSNSCC 207
>MGI|MGI:97843 [details] [associations]
symbol:Rab3a "RAB3A, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001669 "acrosomal vesicle" evidence=IDA] [GO:0001671 "ATPase
activator activity" evidence=ISO] [GO:0003016 "respiratory system
process" evidence=IMP] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0008021 "synaptic vesicle"
evidence=ISO;IDA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016079 "synaptic vesicle
exocytosis" evidence=IMP] [GO:0016188 "synaptic vesicle maturation"
evidence=IMP] [GO:0017157 "regulation of exocytosis" evidence=IDA]
[GO:0030324 "lung development" evidence=IMP] [GO:0031630
"regulation of synaptic vesicle fusion to presynaptic membrane"
evidence=IMP] [GO:0032781 "positive regulation of ATPase activity"
evidence=ISO] [GO:0043229 "intracellular organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0048790
"maintenance of presynaptic active zone structure" evidence=IMP]
[GO:0050975 "sensory perception of touch" evidence=IMP] [GO:0051020
"GTPase binding" evidence=ISO] [GO:0051117 "ATPase binding"
evidence=ISO] [GO:0051602 "response to electrical stimulus"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:97843 EMBL:X72966 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0043234 GO:GO:0030324
GO:GO:0015031 GO:GO:0008021 GO:GO:0051602 GO:GO:0007274
GO:GO:0003924 GO:GO:0001669 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671 GO:GO:0007005
GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351
GO:GO:0016188 GO:GO:0031630 HOGENOM:HOG000233968 CTD:5864 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:AK005362
EMBL:AK158727 EMBL:AK161975 EMBL:BC053519 IPI:IPI00122965
PIR:S34070 RefSeq:NP_001159871.1 RefSeq:NP_033027.1 UniGene:Mm.5083
ProteinModelPortal:P63011 SMR:P63011 DIP:DIP-31051N IntAct:P63011
MINT:MINT-85820 STRING:P63011 PhosphoSite:P63011 PaxDb:P63011
PRIDE:P63011 Ensembl:ENSMUST00000034301 Ensembl:ENSMUST00000110090
Ensembl:ENSMUST00000110092 Ensembl:ENSMUST00000110093 GeneID:19339
KEGG:mmu:19339 InParanoid:P63011 ChiTaRS:RAB3A NextBio:296339
Bgee:P63011 CleanEx:MM_RAB3A Genevestigator:P63011
GermOnline:ENSMUSG00000031840 Uniprot:P63011
Length = 220
Score = 307 (113.1 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 67/208 (32%), Positives = 112/208 (53%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--LLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E +
Sbjct: 135 NKCDMEDERVVSSER--GRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLD 192
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
A + A Q+ ++CAC
Sbjct: 193 TADPAVTGAKQGPQLTDQQAPPHQDCAC 220
>RGD|3528 [details] [associations]
symbol:Rab3a "RAB3A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001669 "acrosomal vesicle" evidence=IEA;ISO]
[GO:0001671 "ATPase activator activity" evidence=IDA] [GO:0003016
"respiratory system process" evidence=IEA;ISO] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA;ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0008021 "synaptic vesicle"
evidence=ISO;IDA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0009791 "post-embryonic development"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016079 "synaptic vesicle
exocytosis" evidence=IEA;ISO] [GO:0016188 "synaptic vesicle
maturation" evidence=IEA;ISO] [GO:0017157 "regulation of exocytosis"
evidence=ISO] [GO:0030324 "lung development" evidence=IEA;ISO]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA;ISO] [GO:0032482 "Rab protein signal
transduction" evidence=IC] [GO:0032781 "positive regulation of ATPase
activity" evidence=IDA] [GO:0043229 "intracellular organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA] [GO:0048790
"maintenance of presynaptic active zone structure" evidence=IEA;ISO]
[GO:0050975 "sensory perception of touch" evidence=IEA;ISO]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0051117 "ATPase
binding" evidence=IDA] [GO:0051602 "response to electrical stimulus"
evidence=IEA;ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:3528
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0043234 GO:GO:0016020 GO:GO:0030324 GO:GO:0015031 GO:GO:0008021
GO:GO:0051602 GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671 GO:GO:0007005
GO:GO:0051117 GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975
HOVERGEN:HBG009351 GO:GO:0016188 GO:GO:0031630 HOGENOM:HOG000233968
GO:GO:0032482 CTD:5864 GeneTree:ENSGT00690000101942 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:X06889 EMBL:BC087580
IPI:IPI00325762 PIR:S01765 RefSeq:NP_037150.2 UniGene:Rn.44409
PDB:1ZBD PDB:3RAB PDBsum:1ZBD PDBsum:3RAB ProteinModelPortal:P63012
SMR:P63012 IntAct:P63012 MINT:MINT-1506235 STRING:P63012
PhosphoSite:P63012 PRIDE:P63012 Ensembl:ENSRNOT00000026391
GeneID:25531 KEGG:rno:25531 UCSC:RGD:3528 InParanoid:P63012
EvolutionaryTrace:P63012 NextBio:607029 ArrayExpress:P63012
Genevestigator:P63012 GermOnline:ENSRNOG00000019433 Uniprot:P63012
Length = 220
Score = 307 (113.1 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 67/208 (32%), Positives = 112/208 (53%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--LLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E +
Sbjct: 135 NKCDMEDERVVSSER--GRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLD 192
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
A + A Q+ ++CAC
Sbjct: 193 TADPAVTGAKQGPQLTDQQAPPHQDCAC 220
>UNIPROTKB|Q5KTJ6 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:10036
"Mesocricetus auratus" [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0005923 GO:GO:0030659 PROSITE:PS51419 HOVERGEN:HBG009351
HSSP:P55258 EMBL:AB158369 ProteinModelPortal:Q5KTJ6 SMR:Q5KTJ6
PRIDE:Q5KTJ6 Uniprot:Q5KTJ6
Length = 203
Score = 306 (112.8 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 70/208 (33%), Positives = 117/208 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +LQ+WD
Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRI-KLQVWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + W + + K G + +LL
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSI--KENASAG--VERLLLG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL +
Sbjct: 121 NKCDMEAKRKVLKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFNSLARDILLKSGGRR 177
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNCA 662
+G+ S S + + KN C+
Sbjct: 178 SGNHSKPS----STDLKPSDKKNTNKCS 201
>TAIR|locus:2086290 [details] [associations]
symbol:RABA1g "RAB GTPase homolog A1G" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0005829
"cytosol" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0046686 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 EMBL:AP000370
KO:K07976 HOGENOM:HOG000233968 HSSP:P35278 EMBL:AK118727
EMBL:BT005565 IPI:IPI00529915 RefSeq:NP_188124.1 UniGene:At.24446
UniGene:At.70390 ProteinModelPortal:Q9LK99 SMR:Q9LK99 PaxDb:Q9LK99
PRIDE:Q9LK99 EnsemblPlants:AT3G15060.1 GeneID:820735
KEGG:ath:AT3G15060 TAIR:At3g15060 InParanoid:Q9LK99 OMA:DHTEANI
PhylomeDB:Q9LK99 ProtClustDB:CLSN2915648 Genevestigator:Q9LK99
Uniprot:Q9LK99
Length = 217
Score = 306 (112.8 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 72/205 (35%), Positives = 121/205 (59%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D +FLYK+++IG+ G GK++++ R+ FS ++TIGV+FA + + D E I++ Q+
Sbjct: 8 DDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVD-EKIVKAQI 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+DVTR TF+ V +W ++L + N I +
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT---EAN-IVIM 122
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI--LEN 629
L+ NK D + ++ AK F + N + + ETSA + +N+++A ++ +I + +
Sbjct: 123 LVGNKADLRHLRAVSTEDAKA--FAEREN-TFFMETSALEALNVENAFTEVLSQIYRVAS 179
Query: 630 DKVQANGDSHATSEAVFSLNRNSQE 654
K GD H T S+N S++
Sbjct: 180 KKALDIGDDHTTLPKGQSINVGSKD 204
>ZFIN|ZDB-GENE-030826-30 [details] [associations]
symbol:rab13 "RAB13, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-030826-30 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0001525 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:BX004983 EMBL:BC053195 IPI:IPI00509437
RefSeq:NP_958486.1 UniGene:Dr.20822 SMR:Q7T3A4
Ensembl:ENSDART00000046922 GeneID:373105 KEGG:dre:373105
InParanoid:Q7T3A4 NextBio:20813372 Uniprot:Q7T3A4
Length = 200
Score = 306 (112.8 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 67/189 (35%), Positives = 112/189 (59%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K +FL+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF +K + + + + +L
Sbjct: 1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +++ + W + + K G +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSI--KENASAG--VS 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL-- 627
+LL NKCD + K ++ ++ KEH +FETSAK +IN++++ +L + IL
Sbjct: 116 RMLLGNKCDIEAKRKVSKETG--EKLAKEHGIR-FFETSAKSSINVEESFTSLARDILLK 172
Query: 628 ENDKVQANG 636
N K +G
Sbjct: 173 SNKKPGPSG 181
>UNIPROTKB|Q08DE8 [details] [associations]
symbol:RAB7B "Ras-related protein Rab-7b" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0005764
"lysosome" evidence=ISS] [GO:0034144 "negative regulation of
toll-like receptor 4 signaling pathway" evidence=ISS] [GO:0032755
"positive regulation of interleukin-6 production" evidence=ISS]
[GO:0005770 "late endosome" evidence=ISS] [GO:0005794 "Golgi
apparatus" evidence=ISS] [GO:0034164 "negative regulation of
toll-like receptor 9 signaling pathway" evidence=ISS] [GO:0045654
"positive regulation of megakaryocyte differentiation"
evidence=ISS] [GO:0034499 "late endosome to Golgi transport"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=ISS] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GO:GO:0032755 GO:GO:0005764
GO:GO:0005770 GO:GO:0005802 GO:GO:0051092 GO:GO:0045654
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0034499
GO:GO:0034144 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104345
EMBL:BC123789 IPI:IPI00713620 RefSeq:NP_001071481.1
UniGene:Bt.11413 ProteinModelPortal:Q08DE8 STRING:Q08DE8
Ensembl:ENSBTAT00000016976 GeneID:538050 KEGG:bta:538050 CTD:338382
InParanoid:Q08DE8 KO:K07898 OMA:LHQYVHK OrthoDB:EOG4RNB9D
NextBio:20877271 GO:GO:0034164 Uniprot:Q08DE8
Length = 200
Score = 305 (112.4 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 67/176 (38%), Positives = 104/176 (59%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P K+ L K+++IG LG GKTS++ RYVH+ F Y+ T+G K++ + +T ++LQ
Sbjct: 3 PRKKVDL-KLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILE-DTTLKLQ 60
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD GQERF +M +YK + G + FDVT +F+A+ W+ D+ AK T+P P P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAK-TIPMEQPYPM 119
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D + A+ + KE + +FE SAK++IN+ A + L + L
Sbjct: 120 VVLGNKIDLEDRQVPQEVAQ--GWCKEKDIP-YFEVSAKNDINVVQAFEMLASRAL 172
>ZFIN|ZDB-GENE-041210-268 [details] [associations]
symbol:rab3ab "RAB3A, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-041210-268
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:BX936438 IPI:IPI00515876
ProteinModelPortal:F1QVZ4 Ensembl:ENSDART00000124350 Bgee:F1QVZ4
Uniprot:F1QVZ4
Length = 287
Score = 305 (112.4 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 68/208 (32%), Positives = 110/208 (52%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 87 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 145
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F AV W + K D + +L+
Sbjct: 146 AGQERYRTITTAYYRGAMGFILMYDITNEESFAAVQDWSTQI--KTYSWDNAQV--LLVG 201
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + ++ + EH +FE SAKDNIN+ + LV I E +
Sbjct: 202 NKCDMEDERVV--ASERGRQLSEHLGFEYFEASAKDNINVKQTFERLVDIICEKMSESLD 259
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
A + A Q ++CAC
Sbjct: 260 AADPAVTGAKQGPQLTEQPAAPHQDCAC 287
>UNIPROTKB|Q95UJ0 [details] [associations]
symbol:Rab7a "Ras-related protein Rab-7a" species:43137
"Paramecium octaurelia" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=IMP] [GO:0090383
"phagosome acidification" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0030670 GO:GO:0015031 PROSITE:PS51419 GO:GO:0090383
EMBL:AY050242 EMBL:AY744503 EMBL:FJ358492 HSSP:P32939
ProteinModelPortal:Q95UJ0 SMR:Q95UJ0 Uniprot:Q95UJ0
Length = 206
Score = 304 (112.1 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 68/213 (31%), Positives = 114/213 (53%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L+KI+++G+ G GKTS++ +YV+ F+ YRAT+G DF K + D + ++ L
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMID-DRMVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+D+T +FD++ W+ + + D P
Sbjct: 60 QIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D+ E +K ++ K H +FE SAKD NI+ A + + + +
Sbjct: 120 FVVLGNKLDKATERKVQE-SKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 631 KVQANGDSHATSEAVFSLNRNSQ--ETKNGRNC 661
K D +L + SQ + K G C
Sbjct: 179 K-----DEEIFFPTTVTLTKQSQKPQAKQGGCC 206
>UNIPROTKB|P51153 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005923 "tight junction" evidence=IEA] [GO:0030659 "cytoplasmic
vesicle membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0005737 GO:GO:0007264 GO:GO:0016192 GO:GO:0015031
GO:GO:0003924 GO:GO:0007155 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 EMBL:CH471121 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL358472 CTD:5872 KO:K06109 OrthoDB:EOG4BVRVS EMBL:X75593
EMBL:AY423722 EMBL:AF498948 EMBL:AK291580 EMBL:BT019700
EMBL:BT019701 EMBL:BC000799 EMBL:BC009227 EMBL:BC073168
IPI:IPI00016373 PIR:A49647 RefSeq:NP_002861.1 UniGene:Hs.151536
ProteinModelPortal:P51153 SMR:P51153 IntAct:P51153 STRING:P51153
PhosphoSite:P51153 DMDM:1710016 PaxDb:P51153 PRIDE:P51153
DNASU:5872 Ensembl:ENST00000368575 GeneID:5872 KEGG:hsa:5872
UCSC:uc001fdt.1 GeneCards:GC01M153954 HGNC:HGNC:9762 HPA:HPA003996
MIM:602672 neXtProt:NX_P51153 PharmGKB:PA34103 InParanoid:P51153
OMA:AMGIVLI PhylomeDB:P51153 ChiTaRS:RAB13 GenomeRNAi:5872
NextBio:22808 ArrayExpress:P51153 Bgee:P51153 CleanEx:HS_RAB13
Genevestigator:P51153 GermOnline:ENSG00000143545 Uniprot:P51153
Length = 203
Score = 303 (111.7 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 68/206 (33%), Positives = 117/206 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +LQ+WD
Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KLQVWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + W + + K G + +LL
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSI--KENASAG--VERLLLG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--ENDKV 632
NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL +
Sbjct: 121 NKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLKSGGRR 177
Query: 633 QANGDSHATSEAVFSLNRNSQETKNG 658
NG+ +++ +N+ + G
Sbjct: 178 SGNGNKPPSTDLKTCDKKNTNKCSLG 203
>UNIPROTKB|F1PTE3 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005923 "tight junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005923 GeneTree:ENSGT00700000104031
OMA:AMGIVLI EMBL:AAEX03005351 Ensembl:ENSCAFT00000027549
Uniprot:F1PTE3
Length = 203
Score = 302 (111.4 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 65/184 (35%), Positives = 107/184 (58%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +LQ+WD
Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKI-KLQVWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + W + + K G + +LL
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSI--KENASAG--VERLLLG 120
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + I + +EH +FETSAK + N+D+A +L + IL + +
Sbjct: 121 NKCDMEAKRKVQKEQAI-KLAREHGIR-FFETSAKSSTNVDEAFSSLARDILLKSGGRRS 178
Query: 636 GDSH 639
G+SH
Sbjct: 179 GNSH 182
>RGD|620879 [details] [associations]
symbol:Rab10 "RAB10, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000145 "exocyst" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005768 "endosome" evidence=ISO;ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISO;ISS] [GO:0005794 "Golgi apparatus"
evidence=ISO;ISS] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO;ISS] [GO:0006893 "Golgi
to plasma membrane transport" evidence=IMP] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0016020 "membrane" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=ISO;ISS]
[GO:0016197 "endosomal transport" evidence=ISO;ISS] [GO:0019003
"GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0030859 "polarized epithelial cell
differentiation" evidence=ISS] [GO:0031489 "myosin V binding"
evidence=ISO] [GO:0032593 "insulin-responsive compartment"
evidence=ISO;ISS] [GO:0032869 "cellular response to insulin
stimulus" evidence=ISO;ISS] [GO:0043001 "Golgi to plasma membrane
protein transport" evidence=ISS] [GO:0045200 "establishment of
neuroblast polarity" evidence=IMP] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0055037 "recycling endosome"
evidence=ISO;ISS] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0071236 "cellular response to antibiotic"
evidence=IEP] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=ISO;ISS] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=ISO;ISS] [GO:0072372 "primary
cilium" evidence=ISO;IDA] [GO:0072659 "protein localization to
plasma membrane" evidence=ISO;ISS] [GO:0097051 "establishment of
protein localization to endoplasmic reticulum membrane"
evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620879 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0030670 GO:GO:0016020
GO:GO:0071236 GO:GO:0032869 GO:GO:0016197 GO:GO:0055037
GO:GO:0007409 GO:GO:0005802 GO:GO:0072372 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032593 GO:GO:0043001 GO:GO:0055038
GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859
EMBL:M83677 IPI:IPI00196790 PIR:B42148 UniGene:Rn.65864
ProteinModelPortal:P35281 SMR:P35281 IntAct:P35281
PhosphoSite:P35281 PRIDE:P35281 Genevestigator:P35281
Uniprot:P35281
Length = 200
Score = 302 (111.4 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 64/178 (35%), Positives = 104/178 (58%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TI +DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHAN----EDVERMLLR 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL V+
Sbjct: 122 NKCDMDHKRVVPK-GKGEQIAREHRIR-FFETSAKANINIEKAFLTLPEDILRKTPVK 177
>ZFIN|ZDB-GENE-040927-2 [details] [associations]
symbol:zgc:100918 "zgc:100918" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040927-2 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07897 OrthoDB:EOG4QFWF4
GeneTree:ENSGT00700000104345 EMBL:CABZ01063557 EMBL:CABZ01063558
EMBL:CABZ01063559 EMBL:CABZ01063560 EMBL:BC082296 IPI:IPI00484756
RefSeq:NP_001005591.1 UniGene:Dr.45927 SMR:Q641M4 STRING:Q641M4
Ensembl:ENSDART00000113926 Ensembl:ENSDART00000123608 GeneID:449549
KEGG:dre:449549 InParanoid:Q641M4 NextBio:20832667 Uniprot:Q641M4
Length = 205
Score = 302 (111.4 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 66/213 (30%), Positives = 120/213 (56%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + + + +FETSAK+ IN+D A +T+ + L
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQA--WCQSKSNIPYFETSAKEAINVDQAFQTIARNAL--- 174
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K ++ +++ + + L R+ + +G C+C
Sbjct: 175 KQESEVETYDFPDQI-KL-RDDRPVSSGDGCSC 205
>UNIPROTKB|Q58DS5 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=ISS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=IEA] [GO:0005923 "tight
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 EMBL:BT021522 EMBL:BC109840 IPI:IPI00687642
RefSeq:NP_001019711.1 UniGene:Bt.4127 ProteinModelPortal:Q58DS5
SMR:Q58DS5 STRING:Q58DS5 PRIDE:Q58DS5 Ensembl:ENSBTAT00000023407
GeneID:514541 KEGG:bta:514541 CTD:5872 GeneTree:ENSGT00700000104031
InParanoid:Q58DS5 KO:K06109 OrthoDB:EOG4BVRVS NextBio:20871388
Uniprot:Q58DS5
Length = 203
Score = 301 (111.0 bits), Expect = 3.3e-26, P = 3.3e-26
Identities = 69/208 (33%), Positives = 118/208 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +LQ+WD
Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKI-KLQVWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + W + + K G + +LL
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSI--KENASAG--VERLLLG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL +++
Sbjct: 121 NKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL----LKS 173
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNCA 662
G + S + + + KN C+
Sbjct: 174 GGRRLKNNNKPPSTDLKTCDKKNTNKCS 201
>UNIPROTKB|Q96E17 [details] [associations]
symbol:RAB3C "Ras-related protein Rab-3C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157
HOGENOM:HOG000233968 OrthoDB:EOG4TB4C6 HPA:HPA003160 CTD:115827
KO:K07883 OMA:QMASSQD EMBL:AY026936 EMBL:BC013033 IPI:IPI00061114
RefSeq:NP_612462.1 UniGene:Hs.482173 ProteinModelPortal:Q96E17
SMR:Q96E17 IntAct:Q96E17 STRING:Q96E17 PhosphoSite:Q96E17
DMDM:23396832 PaxDb:Q96E17 PRIDE:Q96E17 Ensembl:ENST00000282878
GeneID:115827 KEGG:hsa:115827 UCSC:uc003jrp.3 GeneCards:GC05P057914
HGNC:HGNC:30269 MIM:612829 neXtProt:NX_Q96E17 PharmGKB:PA134874100
InParanoid:Q96E17 PhylomeDB:Q96E17 GenomeRNAi:115827 NextBio:79698
Bgee:Q96E17 CleanEx:HS_RAB3C Genevestigator:Q96E17
GermOnline:ENSG00000152932 Uniprot:Q96E17
Length = 227
Score = 301 (111.0 bits), Expect = 3.3e-26, P = 3.3e-26
Identities = 72/212 (33%), Positives = 118/212 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--ILVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + + + + E +FETSAKDNIN+ + LV I DK+
Sbjct: 143 NKCDMEDERVISTER--GQHLGEQLGFEFFETSAKDNINVKQTFERLVDIIC--DKMS-- 196
Query: 636 GDSHATSEAVFSLNRNSQ--ETKNGR--NCAC 663
+S T A+ + +N++ ET NCAC
Sbjct: 197 -ESLETDPAITAAKQNTRLKETPPPPQPNCAC 227
>UNIPROTKB|Q6DUB4 [details] [associations]
symbol:Rab7b "Ras-related protein Rab-7b" species:43137
"Paramecium octaurelia" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005874 "microtubule" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0031912 "oral apparatus"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 GO:GO:0005874 EMBL:AY644723 EMBL:AY875981
ProteinModelPortal:Q6DUB4 SMR:Q6DUB4 GO:GO:0031912 Uniprot:Q6DUB4
Length = 206
Score = 300 (110.7 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 67/213 (31%), Positives = 114/213 (53%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L+KI+++G+ G GKTS++ +YV+ F+ YRAT+G DF K + D + ++ L
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMID-DRMVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+D+T +FD++ W+ + + D P
Sbjct: 60 QIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D+ E +K ++ K H +FE SAKD NI+ A + + + +
Sbjct: 120 FVVLGNKLDKATERKVQE-SKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 631 KVQANGDSHATSEAVFSLNRNS--QETKNGRNC 661
K D +L + ++TK G C
Sbjct: 179 K-----DEEIFFPTTVTLTKQDPKKQTKQGGCC 206
>MGI|MGI:1927232 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0005923 "tight junction" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=TAS] [GO:0019897
"extrinsic to plasma membrane" evidence=TAS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1927232 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
Reactome:REACT_147847 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0019897 GO:GO:0016023 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:5872 GeneTree:ENSGT00700000104031
KO:K06109 OrthoDB:EOG4BVRVS OMA:AMGIVLI EMBL:AK002303 EMBL:BC027214
IPI:IPI00121183 RefSeq:NP_080953.1 UniGene:Mm.29355
ProteinModelPortal:Q9DD03 SMR:Q9DD03 MINT:MINT-1340848
STRING:Q9DD03 PhosphoSite:Q9DD03 PaxDb:Q9DD03 PRIDE:Q9DD03
Ensembl:ENSMUST00000065418 GeneID:68328 KEGG:mmu:68328
UCSC:uc008qbn.1 InParanoid:Q9DD03 NextBio:327005 Bgee:Q9DD03
CleanEx:MM_RAB13 Genevestigator:Q9DD03
GermOnline:ENSMUSG00000027935 Uniprot:Q9DD03
Length = 202
Score = 300 (110.7 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 69/204 (33%), Positives = 116/204 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +LQ+WD
Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRI-KLQVWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + W + + K G + +LL
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSI--KENASAG--VERLLLG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKCD + K + A ++ +EH +FETSAK ++N+D+A +L + IL ++
Sbjct: 121 NKCDMEAKRQVQREQA--EKLAREHRIR-FFETSAKSSVNVDEAFSSLARDIL----LKT 173
Query: 635 NGDSHATSEAVFSLN-RNSQETKN 657
G T+ S + S + KN
Sbjct: 174 GGRRSGTNSKPSSTGLKTSDKKKN 197
>RGD|1562617 [details] [associations]
symbol:Rab7b "Rab7b, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005770 "late
endosome" evidence=IEA;ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0005802 "trans-Golgi network" evidence=ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=ISO] [GO:0034144 "negative regulation of toll-like
receptor 4 signaling pathway" evidence=IEA] [GO:0034164 "negative
regulation of toll-like receptor 9 signaling pathway" evidence=IEA]
[GO:0034499 "late endosome to Golgi transport" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0045654
"positive regulation of megakaryocyte differentiation"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:1562617 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0005764 GO:GO:0005770
EMBL:CH473958 GO:GO:0034144 GeneTree:ENSGT00700000104345 CTD:338382
KO:K07898 OMA:LHQYVHK OrthoDB:EOG4RNB9D GO:GO:0034164
IPI:IPI00869695 RefSeq:NP_001102798.1 UniGene:Rn.140691
Ensembl:ENSRNOT00000009280 GeneID:501854 KEGG:rno:501854
UCSC:RGD:1562617 NextBio:710024 Uniprot:D4A7A8
Length = 199
Score = 300 (110.7 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 65/176 (36%), Positives = 103/176 (58%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P K+ L K++++G LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ
Sbjct: 3 PRKKVDL-KLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILD-DTTLKLQ 60
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD GQERF +M +YK + G + FDVT +F+A+ W+ D+ AK+ +P P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKI-VPMEQSYPM 119
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D + A E+ KE + +FE SAK++IN+ A + L + L
Sbjct: 120 VVLGNKIDLEDRKVPQEVAH--EWCKEKDMP-YFEVSAKNDINVVQAFEVLASRAL 172
>ZFIN|ZDB-GENE-040801-62 [details] [associations]
symbol:rab35 "RAB35, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-62 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
CTD:11021 KO:K07876 EMBL:BC077124 IPI:IPI00919647
RefSeq:NP_001003548.1 UniGene:Dr.14855 ProteinModelPortal:Q6DEJ0
SMR:Q6DEJ0 GeneID:445154 KEGG:dre:445154 InParanoid:Q6DEJ0
NextBio:20831916 ArrayExpress:Q6DEJ0 Uniprot:Q6DEJ0
Length = 201
Score = 300 (110.7 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 66/202 (32%), Positives = 110/202 (54%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +LQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKV-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +L+
Sbjct: 65 AGQERFRTITSTYYRGTHGVVVVYDVTSAESFVNVKRWLHEINQNC-----DDVCRILVG 119
Query: 576 NKCDQPKEGIAN-NPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NK D P + N A+ +F ++ S FETSAK+N+N+++ + + +L K
Sbjct: 120 NKNDDPNSKVVETNDAQ--KFAEQMGIS-LFETSAKENVNVEEMFNCITELVLRAKKESV 176
Query: 635 NGDSHATSEAVFSLNRNSQETK 656
V L +NS+ K
Sbjct: 177 AKQQQQQQNDVIKLKQNSKRKK 198
>WB|WBGene00004273 [details] [associations]
symbol:rab-10 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0006412
"translation" evidence=IMP] [GO:0043652 "engulfment of apoptotic
cell" evidence=IMP] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IMP] [GO:0001881 "receptor recycling" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055037 "recycling
endosome" evidence=IDA] [GO:0005797 "Golgi medial cisterna"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0031045
"dense core granule" evidence=IDA] [GO:0030424 "axon" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0008340 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040007 GO:GO:0007264 GO:GO:0002119
GO:GO:0032940 GO:GO:0006412 GO:GO:0015031 GO:GO:0030424
GO:GO:0043025 GO:GO:0040018 GO:GO:0055037 GO:GO:0040035
GO:GO:0005769 GO:GO:0001881 GO:GO:0032456 GO:GO:0040002
GO:GO:0043652 GO:GO:0005797 GO:GO:0031045 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00700000104031
EMBL:FO081319 PIR:T28971 RefSeq:NP_491857.1
ProteinModelPortal:Q94148 SMR:Q94148 STRING:Q94148
EnsemblMetazoa:T23H2.5.1 EnsemblMetazoa:T23H2.5.2
EnsemblMetazoa:T23H2.5.3 GeneID:266836 KEGG:cel:CELE_T23H2.5
UCSC:T23H2.5.1 CTD:266836 WormBase:T23H2.5 InParanoid:Q94148
OMA:HETSAKL NextBio:953212 ArrayExpress:Q94148 Uniprot:Q94148
Length = 201
Score = 299 (110.3 bits), Expect = 5.5e-26, P = 5.5e-26
Identities = 61/172 (35%), Positives = 104/172 (60%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +FD + KW +++D + + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHAS----EDVVKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + + ++ ++H S + ETSAK N+++D A L + IL
Sbjct: 122 NKCDMSDRRVVSRE-RGEKIAQDHGIS-FHETSAKLNVHVDTAFYDLAEAIL 171
>ZFIN|ZDB-GENE-040801-2 [details] [associations]
symbol:rab3aa "RAB3A, member RAS oncogene family, a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-2 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 KO:K07882 EMBL:CR769774 EMBL:BC075980
IPI:IPI00484138 RefSeq:NP_001003419.1 UniGene:Dr.83119 SMR:Q6DHJ2
Ensembl:ENSDART00000078838 GeneID:445024 KEGG:dre:445024 CTD:445024
InParanoid:Q6DHJ2 OMA:DIICERM OrthoDB:EOG42NJ17 NextBio:20831785
Uniprot:Q6DHJ2
Length = 220
Score = 299 (110.3 bits), Expect = 5.5e-26, P = 5.5e-26
Identities = 66/209 (31%), Positives = 115/209 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKVLIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWSTQI--KTYSWDNAQV--LLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD E + + + ++ F +FE SAKDNIN+ + LV I E +
Sbjct: 135 NKCDMEDERVVAGQ-RGRQLSEQLGFE-FFEASAKDNINVKQTFERLVDVICERMSENLE 192
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ D T + + Q ++ ++CAC
Sbjct: 193 SADPSMTGNKL-GPELSEQPQRSHKDCAC 220
>MGI|MGI:2442295 [details] [associations]
symbol:5430435G22Rik "RIKEN cDNA 5430435G22 gene"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005764
"lysosome" evidence=IDA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005770 "late endosome" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0034144 "negative regulation of toll-like receptor 4 signaling
pathway" evidence=IMP] [GO:0034164 "negative regulation of
toll-like receptor 9 signaling pathway" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:2442295
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 EMBL:CH466520 GO:GO:0032755 GO:GO:0005764
GO:GO:0005770 GO:GO:0005802 GO:GO:0051092 GO:GO:0045654
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0034499
GO:GO:0034144 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104345
KO:K07898 OMA:LHQYVHK OrthoDB:EOG4RNB9D GO:GO:0034164 EMBL:AB232641
EMBL:AK030688 EMBL:AK036056 EMBL:AK079999 IPI:IPI00124400
IPI:IPI00453505 RefSeq:NP_663484.1 UniGene:Mm.44508
ProteinModelPortal:Q8VEA8 SMR:Q8VEA8 STRING:Q8VEA8
PhosphoSite:Q8VEA8 PRIDE:Q8VEA8 Ensembl:ENSMUST00000064664
Ensembl:ENSMUST00000064679 GeneID:226421 KEGG:mmu:226421
UCSC:uc007cnp.1 UCSC:uc007cnq.1 InParanoid:Q0PD09 NextBio:378152
Bgee:Q8VEA8 CleanEx:MM_5430435G22RIK Genevestigator:Q8VEA8
GermOnline:ENSMUSG00000052688 Uniprot:Q8VEA8
Length = 199
Score = 298 (110.0 bits), Expect = 7.2e-26, P = 7.2e-26
Identities = 65/188 (34%), Positives = 108/188 (57%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P K+ L K++++G LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ
Sbjct: 3 PRKKVDL-KLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILD-DTTLKLQ 60
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD GQERF +M +YK + G + FDVT +F+A+ W+ D+ AK+ +P P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKI-IPMEQSYPM 119
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
V+L NK D ++ + + KE + +FE SAK++IN+ A + L + L +
Sbjct: 120 VVLGNKIDLEDRKVSQEV--VHGWCKEKDMP-YFEVSAKNDINVVQAFEVLASRALL--R 174
Query: 632 VQANGDSH 639
Q ++H
Sbjct: 175 YQGTAENH 182
>UNIPROTKB|Q6P9W6 [details] [associations]
symbol:Rab3b "Ras-related protein Rab-3B" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0030141
"secretory granule" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0030141 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0018125 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OMA:WFDFFEA IPI:IPI00470247
UniGene:Rn.3788 HSSP:P10114 EMBL:BC060562 SMR:Q6P9W6 STRING:Q6P9W6
Ensembl:ENSRNOT00000010645 InParanoid:Q6P9W6 Genevestigator:Q6P9W6
Uniprot:Q6P9W6
Length = 228
Score = 298 (110.0 bits), Expect = 7.2e-26, P = 7.2e-26
Identities = 71/222 (31%), Positives = 122/222 (54%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + HE ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI--KTYSWDNAQV--ILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKE-------HNFSGWF---ETSAKDNINIDDAAKTLVQK 625
NKCD +E + P + + E H ++ WF E SAK+NI++ A + LV
Sbjct: 135 NKCDMEEERVI--PTEKGRLLAEQLGMHTAHTYT-WFDFFEASAKENISVRQAFERLVDA 191
Query: 626 ILENDKVQANGDSHATSEAVFSLNRNSQETKNG----RNCAC 663
I DK+ DS T +V ++ ++ + +NC+C
Sbjct: 192 IC--DKMS---DSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 228
>WB|WBGene00004271 [details] [associations]
symbol:rab-7 species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=IEA;IDA] [GO:0003924
"GTPase activity" evidence=IEA;ISS;IDA] [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0019915
"lipid storage" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0043652 "engulfment of
apoptotic cell" evidence=IMP] [GO:0016197 "endosomal transport"
evidence=IMP] [GO:0001555 "oocyte growth" evidence=IMP] [GO:0031090
"organelle membrane" evidence=IDA] [GO:0005770 "late endosome"
evidence=IDA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0005764 "lysosome" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0090387 "phagolysosome
assembly involved in apoptotic cell clearance" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0008340 GO:GO:0009792 GO:GO:0007264
GO:GO:0030670 GO:GO:0002119 GO:GO:0015031 GO:GO:0008219
GO:GO:0018996 GO:GO:0003924 GO:GO:0010171 GO:GO:0040011
GO:GO:0005764 GO:GO:0016197 GO:GO:0005770 GO:GO:0019915
GO:GO:0043652 eggNOG:COG1100 GO:GO:0001555 HOGENOM:HOG000233968
KO:K07897 GeneTree:ENSGT00700000104345 OMA:SPRDPEH HSSP:P32939
EMBL:Z66516 GO:GO:0090387 PIR:T26119 RefSeq:NP_496549.1
ProteinModelPortal:Q23146 SMR:Q23146 IntAct:Q23146 STRING:Q23146
PaxDb:Q23146 EnsemblMetazoa:W03C9.3.1 EnsemblMetazoa:W03C9.3.2
EnsemblMetazoa:W03C9.3.3 GeneID:174834 KEGG:cel:CELE_W03C9.3
UCSC:W03C9.3.1 CTD:174834 WormBase:W03C9.3 InParanoid:Q23146
NextBio:885704 Uniprot:Q23146
Length = 209
Score = 298 (110.0 bits), Expect = 7.2e-26, P = 7.2e-26
Identities = 67/210 (31%), Positives = 120/210 (57%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF + ++ D T+ LQ+W
Sbjct: 5 RKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVT-LQIW 63
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A + FDVT AA+F ++ W+ + + + D + P VL
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVL 123
Query: 574 LANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
L NK D + + +++ A+ + + ++E SAK+ +N++ A + + L +
Sbjct: 124 LGNKVDLESQRAVSSKRAQ--SWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALARESQ 181
Query: 633 QANGDSHATSEAVFSLNRNSQETKN-GRNC 661
+ N D + + LN N Q +N G NC
Sbjct: 182 ETN-DFPEFPDQI-RLNPNQQNQQNSGCNC 209
>UNIPROTKB|P10949 [details] [associations]
symbol:RAB3C "Ras-related protein Rab-3C" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942
OrthoDB:EOG4TB4C6 EMBL:M19887 EMBL:BC112795 IPI:IPI00713835
PIR:C29224 RefSeq:NP_001040071.1 RefSeq:NP_789862.1
UniGene:Bt.91125 ProteinModelPortal:P10949 SMR:P10949 PRIDE:P10949
Ensembl:ENSBTAT00000009611 GeneID:338100 GeneID:617600
KEGG:bta:338100 KEGG:bta:617600 CTD:115827 InParanoid:P10949
KO:K07883 OMA:QMASSQD NextBio:20812538 ArrayExpress:P10949
Uniprot:P10949
Length = 227
Score = 297 (109.6 bits), Expect = 9.2e-26, P = 9.2e-26
Identities = 71/212 (33%), Positives = 117/212 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--ILVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + + + + E +FETSAKDNIN+ + LV I DK+
Sbjct: 143 NKCDMEDERVISTER--GQHLGEQLGFEFFETSAKDNINVKQTFERLVDIIC--DKMS-- 196
Query: 636 GDSHATSEAVFSLNRNSQ--ETKNGR--NCAC 663
+S T A+ + +N++ ET NC C
Sbjct: 197 -ESLETDPAITAAKQNTRLKETPPPPQPNCGC 227
>TAIR|locus:2065858 [details] [associations]
symbol:RABA5d "RAB GTPase homolog A5D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0007264 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC007071 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 ProtClustDB:CLSN2683060
EMBL:BT009720 EMBL:AK227705 EMBL:AY085494 IPI:IPI00523233
PIR:G84723 RefSeq:NP_180726.1 UniGene:At.14359 UniGene:At.66393
ProteinModelPortal:Q9SIP0 SMR:Q9SIP0 PaxDb:Q9SIP0 PRIDE:Q9SIP0
EnsemblPlants:AT2G31680.1 GeneID:817724 KEGG:ath:AT2G31680
TAIR:At2g31680 InParanoid:Q9SIP0 OMA:ISRRSTF PhylomeDB:Q9SIP0
Genevestigator:Q9SIP0 Uniprot:Q9SIP0
Length = 219
Score = 297 (109.6 bits), Expect = 9.2e-26, P = 9.2e-26
Identities = 66/187 (35%), Positives = 111/187 (59%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI++IG+ GK++++ RY F+ H +ATIGV+F + + + + + + Q+WD
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV-KAQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA +V+D++R +TF++V +W LD T D + +L+
Sbjct: 69 AGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRW---LDELKTHSD-TTVARMLVG 124
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD E I + + + E + ETSA D+ N+ A + +++ I N + Q
Sbjct: 125 NKCDL--ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182
Query: 635 NGDSHAT 641
N D++ T
Sbjct: 183 NSDTYKT 189
>ASPGD|ASPL0000062894 [details] [associations]
symbol:srgE species:162425 "Emericella nidulans"
[GO:0034498 "early endosome to Golgi transport" evidence=IEA]
[GO:0033205 "cell cycle cytokinesis" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0071852
"fungal-type cell wall organization or biogenesis" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005741 "mitochondrial
outer membrane" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:BN001308
GO:GO:0015031 OMA:ERSAHDE ProteinModelPortal:C8VTZ0
EnsemblFungi:CADANIAT00002359 Uniprot:C8VTZ0
Length = 210
Score = 296 (109.3 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 70/215 (32%), Positives = 126/215 (58%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ +FL+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + + D +TI + Q+
Sbjct: 4 DEYDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTI-KAQI 62
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+++ T+D V +W ++L D N I +
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHA---DSN-IVIM 118
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI--LEN 629
L+ NK D + + AK +F E+N S + ETSA D N++ A + ++ +I + +
Sbjct: 119 LVGNKSDLRHLRAVPTEEAK--QFASENNLS-FIETSALDASNVELAFQNILTEIYRIVS 175
Query: 630 DKV---QANGDSHATSEAVFSLNRNSQETKNGRNC 661
K ++ G S + + + +Q+T+N C
Sbjct: 176 SKALEGESGGASVGERRQIIDIEK-TQDTENKGGC 209
>UNIPROTKB|E2RJS1 [details] [associations]
symbol:LOC488576 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0034164 "negative regulation of
toll-like receptor 9 signaling pathway" evidence=IEA] [GO:0034144
"negative regulation of toll-like receptor 4 signaling pathway"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 GO:GO:0034144 GeneTree:ENSGT00700000104345 KO:K07898
OMA:LHQYVHK GO:GO:0034164 EMBL:AAEX03018265 RefSeq:XP_848668.1
ProteinModelPortal:E2RJS1 Ensembl:ENSCAFT00000016185 GeneID:488576
KEGG:cfa:488576 NextBio:20861902 Uniprot:E2RJS1
Length = 200
Score = 296 (109.3 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 71/210 (33%), Positives = 117/210 (55%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P K+ L K+++IG LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ
Sbjct: 3 PRKKVDL-KLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILD-DTTLKLQ 60
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD GQERF +M +YK + G + FDVT +F+A+ W+ D+ AK T+P P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAK-TIPMEPSYPM 119
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
V+L NK D + A+ + KE + +FE SAK++IN+ A + L + L +
Sbjct: 120 VVLGNKIDLADRQVPQEVAQ--GWCKEKDIP-YFEVSAKNDINVVQAFEMLASRALS--R 174
Query: 632 VQANGDSHATSEAVFSLNRNSQETKNGRNC 661
Q+ +++ T S+ + ++ R C
Sbjct: 175 YQSILENYLTD----SIKLSPEDQSRSRCC 200
>UNIPROTKB|I3LRC7 [details] [associations]
symbol:LOC100627693 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0034164 "negative regulation of toll-like receptor
9 signaling pathway" evidence=IEA] [GO:0034144 "negative regulation
of toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005764 GO:GO:0005770 GO:GO:0034144
GeneTree:ENSGT00700000104345 KO:K07898 OMA:LHQYVHK GO:GO:0034164
EMBL:FP565475 RefSeq:XP_003357460.1 Ensembl:ENSSSCT00000030753
GeneID:100627693 KEGG:ssc:100627693 Uniprot:I3LRC7
Length = 200
Score = 296 (109.3 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 66/176 (37%), Positives = 103/176 (58%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P K+ L K+++IG LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ
Sbjct: 3 PRKKVDL-KLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILD-DTTLKLQ 60
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD GQERF +M +YK + G + FDVT +F+A+ W+ D+ AK T+P P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALETWRGDVLAK-TIPMEQSYPM 119
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D + A+ + KE + +FE SAK++IN+ A + L + L
Sbjct: 120 VVLGNKIDLADRQVPQEVAQ--GWCKEKDIP-YFEVSAKNDINVVQAFEMLAGRAL 172
>TAIR|locus:2199716 [details] [associations]
symbol:RABG3B "RAB GTPase homolog G3B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0010089 "xylem development" evidence=IMP]
[GO:0010508 "positive regulation of autophagy" evidence=IMP]
[GO:0010623 "developmental programmed cell death" evidence=IMP]
[GO:0048102 "autophagic cell death" evidence=IMP] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0007264
GO:GO:0015031 GO:GO:0010508 PROSITE:PS51419 GO:GO:0010089
eggNOG:COG1100 GO:GO:0048102 GO:GO:0010623 EMBL:AC003979
EMBL:Y12227 KO:K07976 HOGENOM:HOG000233968 EMBL:AB071850
EMBL:Y09821 EMBL:BT024589 IPI:IPI00534402 PIR:T00770
RefSeq:NP_173688.1 UniGene:At.20067 ProteinModelPortal:O04157
SMR:O04157 STRING:O04157 PaxDb:O04157 PRIDE:O04157
EnsemblPlants:AT1G22740.1 GeneID:838880 KEGG:ath:AT1G22740
TAIR:At1g22740 InParanoid:O04157 OMA:CIAKLAL PhylomeDB:O04157
ProtClustDB:CLSN2914412 Genevestigator:O04157 GermOnline:AT1G22740
Uniprot:O04157
Length = 203
Score = 296 (109.3 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 63/184 (34%), Positives = 103/184 (55%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +F+++ W + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K E+ E +FETSAK++ N+DD+ + + L N
Sbjct: 120 FILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALAN 179
Query: 630 DKVQ 633
++ Q
Sbjct: 180 ERDQ 183
>TAIR|locus:2018698 [details] [associations]
symbol:RABA1i "RAB GTPase homolog A1I" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC010155 EMBL:AC007508
KO:K07976 HOGENOM:HOG000233968 HSSP:P35278 ProtClustDB:CLSN2679642
EMBL:DQ056467 IPI:IPI00536131 RefSeq:NP_174177.1 UniGene:At.51281
ProteinModelPortal:Q9S810 SMR:Q9S810 PaxDb:Q9S810 PRIDE:Q9S810
EnsemblPlants:AT1G28550.1 GeneID:839755 KEGG:ath:AT1G28550
TAIR:At1g28550 InParanoid:Q9S810 OMA:HDSRATI PhylomeDB:Q9S810
Genevestigator:Q9S810 Uniprot:Q9S810
Length = 218
Score = 296 (109.3 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 69/194 (35%), Positives = 115/194 (59%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D ++L+K+++ G+ G GK++++ R+ FS RATIGV+FA + + D + I++ Q+
Sbjct: 8 DDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCD-DKIVKAQI 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+DVTR TF+ V +W ++L D N I +
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT---DAN-IVIM 122
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA---AKTLVQKILE 628
L+ NK D + I+ AK F + N + + ETSA + +N+D+A T + +++
Sbjct: 123 LVGNKADLRHLRAISTEEAKA--FAEREN-TFFMETSALEAVNVDNAFTEVLTQIYRVVS 179
Query: 629 NDKVQANGDSHATS 642
++A GD T+
Sbjct: 180 KKALEA-GDDPTTA 192
>TAIR|locus:2079631 [details] [associations]
symbol:RABA5b "RAB GTPase homolog A5B" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC009853 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 EMBL:AY072444 EMBL:BT002173
IPI:IPI00541946 RefSeq:NP_187397.1 UniGene:At.43319
UniGene:At.48630 ProteinModelPortal:Q9SRS5 SMR:Q9SRS5 IntAct:Q9SRS5
PaxDb:Q9SRS5 PRIDE:Q9SRS5 EnsemblPlants:AT3G07410.1 GeneID:819929
KEGG:ath:AT3G07410 TAIR:At3g07410 InParanoid:Q9SRS5 OMA:EEGLFFM
PhylomeDB:Q9SRS5 ProtClustDB:CLSN2683060 Genevestigator:Q9SRS5
Uniprot:Q9SRS5
Length = 217
Score = 296 (109.3 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 73/219 (33%), Positives = 125/219 (57%)
Query: 450 KMPDK-REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
K D+ E+L+KI++IG+ GK++++ R+ F + +ATIGV+F +++ + + +
Sbjct: 3 KEDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEV- 61
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+ Q+WD AGQERF +T YY+ A GA IV+D+TR TF++V +W Q+L+ T D
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELN---THCD-TA 117
Query: 569 IPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+ +L+ NKCD E I + + + E + ETSA D N+D A + ++++I
Sbjct: 118 VAQMLVGNKCDL--EDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFN 175
Query: 629 N-DKVQANGDSHATSEAV--FSLNRNSQETKNG-RNCAC 663
N + N D++ +V SL N +++ RN +C
Sbjct: 176 NVSRKLLNSDAYKAELSVNRVSLVNNQDGSESSWRNPSC 214
>ZFIN|ZDB-GENE-040718-2 [details] [associations]
symbol:rab15 "RAB15, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-2 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 CTD:376267 KO:K07908 OMA:HNITETF
OrthoDB:EOG4HDSVG EMBL:BX255891 EMBL:BC075754 IPI:IPI00489491
RefSeq:NP_001002318.1 UniGene:Dr.84043 Ensembl:ENSDART00000049462
GeneID:436590 KEGG:dre:436590 InParanoid:Q6DI36 NextBio:20831039
Uniprot:Q6DI36
Length = 212
Score = 296 (109.3 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 64/182 (35%), Positives = 106/182 (58%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + + L+++L++G+ G GKT ++ R+ F P + +TIGVDF +K L D + R+
Sbjct: 1 MAKQYDVLFRLLLLGDSGVGKTCLLCRFTDNEFHPSHISTIGVDFKMKTLEIDGIKV-RI 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQER+ +T+ YY+ A G F+V+D+T +F ++KW D+D P+ +
Sbjct: 60 QIWDTAGQERYQTITKQYYRRAQGIFLVYDITSERSFQHIMKWASDVDEYA--PE--KVQ 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ NK D Q K +A D+ K + +FETSA N NI ++ L + +L+
Sbjct: 116 KILVGNKSDEQEKRQVATEQG--DKLAKAYGMD-FFETSAFTNHNITESFTRLAELVLQA 172
Query: 630 DK 631
+K
Sbjct: 173 NK 174
>UNIPROTKB|E1C8J9 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IEA] [GO:0030141 "secretory granule" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0030141 GO:GO:0017157 GO:GO:0018125
GeneTree:ENSGT00690000101942 CTD:5865 KO:K06108 OMA:PPSQQNC
EMBL:AADN02012575 IPI:IPI00598636 RefSeq:XP_422470.2
UniGene:Gga.9853 Ensembl:ENSGALT00000017197 GeneID:424636
KEGG:gga:424636 NextBio:20826946 Uniprot:E1C8J9
Length = 219
Score = 295 (108.9 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 67/209 (32%), Positives = 113/209 (54%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + ++ ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTV-YRNDKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITSEDSFNAVQDWATQI--KTYSWDNAQV--ILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E I P + + + + +FE SAK+NIN+ + LV I E
Sbjct: 135 NKCDMEDERII--PLEKGKHLADQLGFDYFEASAKENINVRQVFERLVDIICEKMSESIE 192
Query: 636 GD-SHATSEAVFSLNRNSQETKNGRNCAC 663
D S TS L N ++ +NC+C
Sbjct: 193 SDPSRGTSGRNVRLTDNPPPSQ--QNCSC 219
>UNIPROTKB|E2QSW2 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:AAEX03001448
ProteinModelPortal:E2QSW2 Ensembl:ENSCAFT00000006096 Uniprot:E2QSW2
Length = 225
Score = 295 (108.9 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 69/212 (32%), Positives = 117/212 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 26 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 84
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 85 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--ILVG 140
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + + + + E +FETSAKDNIN+ + LV I DK+
Sbjct: 141 NKCDMEDERVISTER--GQHLGEQLGFEFFETSAKDNINVKQTFERLVDIIC--DKMS-- 194
Query: 636 GDSHATSEAVFSLNRNSQETKNGR----NCAC 663
+S T A+ + +N++ ++ NC C
Sbjct: 195 -ESLETDPAITAAKQNTRLKESPPPAQPNCGC 225
>UNIPROTKB|E2RC93 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942
OMA:QMASSQD EMBL:AAEX03001448 EMBL:AAEX03001449 EMBL:AAEX03001450
ProteinModelPortal:E2RC93 Ensembl:ENSCAFT00000011237 Uniprot:E2RC93
Length = 227
Score = 295 (108.9 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 69/212 (32%), Positives = 117/212 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--ILVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + + + + E +FETSAKDNIN+ + LV I DK+
Sbjct: 143 NKCDMEDERVISTER--GQHLGEQLGFEFFETSAKDNINVKQTFERLVDIIC--DKMS-- 196
Query: 636 GDSHATSEAVFSLNRNSQETKNGR----NCAC 663
+S T A+ + +N++ ++ NC C
Sbjct: 197 -ESLETDPAITAAKQNTRLKESPPPAQPNCGC 227
>SGD|S000004460 [details] [associations]
symbol:YPT7 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0006896 "Golgi to vacuole transport" evidence=TAS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IDA] [GO:0006897
"endocytosis" evidence=IMP] [GO:0000324 "fungal-type vacuole"
evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=IDA] [GO:0032889 "regulation of vacuole fusion,
non-autophagic" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0005773 "vacuole" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030906 "retromer complex, inner shell"
evidence=IPI] [GO:0000329 "fungal-type vacuole membrane"
evidence=IDA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IPI] [GO:0072665 "protein localization to vacuole"
evidence=IMP] [GO:0034727 "piecemeal microautophagy of nucleus"
evidence=IMP] [GO:0006810 "transport" evidence=IEA] [GO:0000011
"vacuole inheritance" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 SGD:S000004460 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0005741 GO:GO:0015031 GO:GO:0003924
GO:GO:0006897 GO:GO:0000329 EMBL:BK006946 GO:GO:0000011
PROSITE:PS51419 EMBL:Z48613 GO:GO:0006896 GO:GO:0032889
eggNOG:COG1100 GO:GO:0042147 GO:GO:0034727 HOGENOM:HOG000233968
KO:K07897 GeneTree:ENSGT00700000104345 OMA:SPRDPEH
OrthoDB:EOG48WGB7 EMBL:X68144 EMBL:D64114 PIR:A44334
RefSeq:NP_013713.1 PDB:1KY2 PDB:1KY3 PDBsum:1KY2 PDBsum:1KY3
ProteinModelPortal:P32939 SMR:P32939 DIP:DIP-1735N IntAct:P32939
MINT:MINT-385354 STRING:P32939 PaxDb:P32939 PeptideAtlas:P32939
PRIDE:P32939 EnsemblFungi:YML001W GeneID:855012 KEGG:sce:YML001W
CYGD:YML001w EvolutionaryTrace:P32939 NextBio:978183
Genevestigator:P32939 GermOnline:YML001W GO:GO:0072665
Uniprot:P32939
Length = 208
Score = 295 (108.9 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 66/217 (30%), Positives = 120/217 (55%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ + K++++G+ G GKTS++ RYV+ +S Y+ATIG DF K ++ D + + +
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQD--LDAKVTLPDGNP 568
Q+WD AGQERF ++ +Y+ A +V+DVT A++F+ + W+ + + A V P+
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPE--T 118
Query: 569 IPCVLLANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
P V+L NK D + K+ ++ A+ E K F TSAK+ IN+D A + + +
Sbjct: 119 FPFVILGNKIDAEESKKIVSEKSAQ--ELAKSLGDIPLFLTSAKNAINVDTAFEEIARSA 176
Query: 627 LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
L+ ++ ++A+ N + +C+C
Sbjct: 177 LQQNQADTEAFEDDYNDAI-----NIRLDGENNSCSC 208
>ASPGD|ASPL0000062908 [details] [associations]
symbol:avaA species:162425 "Emericella nidulans"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0006184
"GTP catabolic process" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030906 "retromer complex, inner shell"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0072665 "protein localization to vacuole" evidence=IEA]
[GO:0061191 "positive regulation of vacuole fusion, non-autophagic"
evidence=IEA] [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0042147 "retrograde transport, endosome to Golgi" evidence=IEA]
[GO:0007035 "vacuolar acidification" evidence=IEA] [GO:0045324
"late endosome to vacuole transport" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0031321
"ascospore-type prospore assembly" evidence=IEA] [GO:0000011
"vacuole inheritance" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0051469 "vesicle fusion with vacuole"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:BN001308
GO:GO:0015031 HOGENOM:HOG000233968 OMA:SPRDPEH
ProteinModelPortal:C8VQY7 SMR:C8VQY7 EnsemblFungi:CADANIAT00002661
Uniprot:C8VQY7
Length = 205
Score = 294 (108.6 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 60/213 (28%), Positives = 117/213 (54%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ + K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MSSRKKVMLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV + +F+A+ W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V++ NK D + + + F + +FETSAK+ +N++ A + + + L +
Sbjct: 120 FVVIGNKIDMEESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 179
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ + G + ++ + N +T CAC
Sbjct: 180 EAEEYGGDY--TDPI-----NIHDTTERDGCAC 205
>POMBASE|SPAC18G6.03 [details] [associations]
symbol:ypt3 "GTPase Ypt3" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=TAS]
[GO:0006887 "exocytosis" evidence=IMP] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IC] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0033205 "cell cycle cytokinesis"
evidence=IMP] [GO:0042144 "vacuole fusion, non-autophagic"
evidence=IMP] [GO:0071852 "fungal-type cell wall organization or
biogenesis" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC18G6.03 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
GO:GO:0000139 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003924
GO:GO:0010008 GO:GO:0006887 PROSITE:PS51419 GO:GO:0033205
eggNOG:COG1100 GO:GO:0042144 GO:GO:0071852 KO:K07976
HOGENOM:HOG000233968 OMA:QKQIRDS OrthoDB:EOG41K2ND EMBL:X52100
EMBL:X52732 PIR:S10026 RefSeq:NP_593667.1 ProteinModelPortal:P17610
SMR:P17610 STRING:P17610 PRIDE:P17610 EnsemblFungi:SPAC18G6.03.1
GeneID:2542219 KEGG:spo:SPAC18G6.03 NextBio:20803288 Uniprot:P17610
Length = 214
Score = 294 (108.6 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 71/218 (32%), Positives = 125/218 (57%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K ++IG+ G GK++++ R+ F+ ++TIGV+FA + + D++ I + Q+
Sbjct: 5 DEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKI-KAQI 63
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA IV+D+T+ ++FD V +W ++L D N I +
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHA---DSN-IVIM 119
Query: 573 LLANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ---KILE 628
L+ NK D ++ A+ F E+N S + ETSA D N+++A +T++ +I+
Sbjct: 120 LVGNKTDLLHLRAVSTEEAQA--FAAENNLS-FIETSAMDASNVEEAFQTVLTEIFRIVS 176
Query: 629 NDKVQANGDS-HATSEAVFSL--NRNSQETKNGRNCAC 663
N ++A D H T+ ++ N K + C
Sbjct: 177 NRSLEAGDDGVHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
>RGD|735172 [details] [associations]
symbol:Rab15 "RAB15, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=TAS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:735172 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 GO:GO:0007269 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 CTD:376267 KO:K07908 OMA:HNITETF
OrthoDB:EOG4HDSVG EMBL:M83679 EMBL:BC094954 IPI:IPI00196795
PIR:F42148 RefSeq:NP_942044.1 UniGene:Rn.24234
ProteinModelPortal:P35289 STRING:P35289 PhosphoSite:P35289
PRIDE:P35289 Ensembl:ENSRNOT00000010043 GeneID:299156
KEGG:rno:299156 UCSC:RGD:735172 InParanoid:P35289 NextBio:644892
Genevestigator:P35289 GermOnline:ENSRNOG00000007364 Uniprot:P35289
Length = 212
Score = 294 (108.6 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 67/214 (31%), Positives = 125/214 (58%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYV-HQFFSPHYRATIGVDFALKVLSWDHETIIR 509
M + + L+++L+IG+ G GKT ++ R+ ++F S H +TIGVDF +K + D + R
Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHI-STIGVDFKMKTIEVDGIKV-R 58
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
+Q+WD AGQER+ +T+ YY+ A G F+V+D++ ++ ++KW D+D P+G +
Sbjct: 59 IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYA--PEG--V 114
Query: 570 PCVLLANKCDQP-KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NK D+ K + + + KE+ ++ETSA N+NI ++ L + +L+
Sbjct: 115 QKILIGNKADEEQKRQVGREQGQ--QLAKEYGMD-FYETSACTNLNIKESFTRLTELVLQ 171
Query: 629 NDKVQANG-DSHATSE-AVFSLNRNSQETKNGRN 660
+ + +G + A++E A+ L + +T+ N
Sbjct: 172 AHRKELDGLRTCASNELALAELEEDEGKTEGPAN 205
>TAIR|locus:2052479 [details] [associations]
symbol:RAB7A "RAB GTPase homolog 7A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC007019 PANTHER:PTHR24070
KO:K07976 HOGENOM:HOG000233968 HSSP:P32939 EMBL:AB071852
EMBL:BT024593 EMBL:AK229492 EMBL:AY084960 IPI:IPI00535065
IPI:IPI00891361 PIR:C84606 RefSeq:NP_001118357.1 RefSeq:NP_565521.1
UniGene:At.14268 ProteinModelPortal:Q9SJ11 SMR:Q9SJ11 PaxDb:Q9SJ11
PRIDE:Q9SJ11 ProMEX:Q9SJ11 EnsemblPlants:AT2G21880.1 GeneID:816724
KEGG:ath:AT2G21880 TAIR:At2g21880 InParanoid:Q948K7 OMA:TKELHID
PhylomeDB:Q9SJ11 ProtClustDB:CLSN2688325 Genevestigator:Q9SJ11
Uniprot:Q9SJ11
Length = 212
Score = 294 (108.6 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 68/212 (32%), Positives = 114/212 (53%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
K L K++V+G+ G GKTS++ +YV++ F+ Y+ATIG DF K L D +++ LQ+W
Sbjct: 5 KNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVT-LQIW 63
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A +V+DV +F+ + W + + + P VL
Sbjct: 64 DTAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVL 123
Query: 574 LANKCDQP--KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
+ NK D + +N I+ + N + ETSAK++ NID+A ++ L N++
Sbjct: 124 IGNKTDVDGGNSRVVSNKRAIEWCGSKGNIP-YHETSAKEDTNIDEAFLSVAHIALSNER 182
Query: 632 VQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
Q+N D + + S+ + + R CAC
Sbjct: 183 KQSN-DIYPRGQYHDSVT-DIIDPDQSRGCAC 212
>TAIR|locus:2171790 [details] [associations]
symbol:RABA4a "RAB GTPase homolog A4A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031 EMBL:AB013395
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P35278 EMBL:AY045947 EMBL:AY079309 EMBL:AY087004
IPI:IPI00520272 RefSeq:NP_201330.1 UniGene:At.9298
ProteinModelPortal:Q9FJN8 SMR:Q9FJN8 STRING:Q9FJN8 PaxDb:Q9FJN8
PRIDE:Q9FJN8 EnsemblPlants:AT5G65270.1 GeneID:836652
KEGG:ath:AT5G65270 TAIR:At5g65270 InParanoid:Q9FJN8 OMA:HGAKGAM
PhylomeDB:Q9FJN8 ProtClustDB:CLSN2685897 Genevestigator:Q9FJN8
Uniprot:Q9FJN8
Length = 226
Score = 294 (108.6 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 66/180 (36%), Positives = 106/180 (58%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y K ++++K+++IG+ GK+ I+ RY FS +ATIGV+F + L DH+++
Sbjct: 7 YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ AVGA +V+D+TR TFD + +W ++L A D N
Sbjct: 67 -KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHA---DKN 122
Query: 568 PIPCVLLANKCDQ-PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
I +L+ NK D + I AK EF ++ + ETSA + N++ A T++ +I
Sbjct: 123 -IVIILIGNKSDLVDQRAIPTEDAK--EFAEKEGLF-FLETSAFNATNVESAFSTVLTEI 178
>WB|WBGene00004284 [details] [associations]
symbol:rab-35 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AL117202 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07876 OMA:NCDVVNR PIR:T31551
RefSeq:NP_499454.1 ProteinModelPortal:Q9U2C3 SMR:Q9U2C3
STRING:Q9U2C3 EnsemblMetazoa:Y47D3A.25.1 EnsemblMetazoa:Y47D3A.25.2
GeneID:176560 KEGG:cel:CELE_Y47D3A.25 UCSC:Y47D3A.25.2 CTD:176560
WormBase:Y47D3A.25 InParanoid:Q9U2C3 NextBio:893084
ArrayExpress:Q9U2C3 Uniprot:Q9U2C3
Length = 209
Score = 294 (108.6 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 68/212 (32%), Positives = 119/212 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GK+S++ R+ FS +Y TIGVDF ++ + + + + +LQ+WD
Sbjct: 8 DHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRV-KLQIWDT 66
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ G +V+DVT +F V +W Q+++ + + VL+
Sbjct: 67 AGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNC-----DSVQKVLVG 121
Query: 576 NKCDQPKEGIA-NNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKC++ + + + A+ + + N S +FETSAK++ N++ T + ++ K+ A
Sbjct: 122 NKCEENERRVVLESDAR--NYAQSMNIS-FFETSAKEDKNVEPMF-TCITSLVLTAKL-A 176
Query: 635 NGDSHATSEAV---FSLNRNSQETKNGRNCAC 663
N S + ++ SL NS T + C C
Sbjct: 177 NPQSASKDQSRTGGVSLKDNSGSTNQKKKCKC 208
>ZFIN|ZDB-GENE-060825-25 [details] [associations]
symbol:zgc:153788 "zgc:153788" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-060825-25 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N
KO:K07930 OMA:LIGDCGT EMBL:CR855375 EMBL:BC122421 IPI:IPI00786530
RefSeq:NP_001038812.1 UniGene:Dr.49036 SMR:Q0P3V5
Ensembl:ENSDART00000082517 GeneID:751627 KEGG:dre:751627
InParanoid:Q0P3V5 NextBio:20917779 Uniprot:Q0P3V5
Length = 208
Score = 294 (108.6 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 65/177 (36%), Positives = 103/177 (58%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D + ++KI+++G++G GKT +++R+ F TIGVDF +K L H ++LQ+
Sbjct: 8 DSYDLVFKIVLVGDVGVGKTCVVQRFKTGIFIEKQGNTIGVDFTMKTLEI-HGKRVKLQI 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQERF +T+ YY+ A GA I +D+T+ ATF +V KW +D+ N +P +
Sbjct: 67 WDTAGQERFRTITQSYYRSANGAIITYDITKKATFLSVPKWMEDVKK---YGGSNIVP-L 122
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEH--NFSGWFETSAKDNINIDDAAKTLVQKIL 627
L+ NKCD + P + D H +F ETSAKD+ N+D+A + +++
Sbjct: 123 LIGNKCDLSES--REVPLE-DAQTMAHQLDFVSAIETSAKDSSNVDEAFNKMASELI 176
>UNIPROTKB|Q9ULC3 [details] [associations]
symbol:RAB23 "Ras-related protein Rab-23" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0008589
"regulation of smoothened signaling pathway" evidence=IEA]
[GO:0021513 "spinal cord dorsal/ventral patterning" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=IDA]
[GO:0000045 "autophagic vacuole assembly" evidence=IMP] [GO:0006968
"cellular defense response" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0042992 "negative regulation of transcription
factor import into nucleus" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0097094 "craniofacial suture morphogenesis"
evidence=IMP] [GO:0045335 "phagocytic vesicle" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 EMBL:CH471081
GO:GO:0015031 GO:GO:0003924 GO:GO:0005776 GO:GO:0000045
GO:GO:0045861 GO:GO:0006968 PROSITE:PS51419
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0042733
eggNOG:COG1100 EMBL:AL031321 GO:GO:0008589 GO:GO:0042992
GO:GO:0097094 HOGENOM:HOG000233968 EMBL:AB034244 EMBL:AB025427
EMBL:AF161486 EMBL:AF498951 EMBL:AK313796 EMBL:AY585189
EMBL:CR749371 EMBL:BC015021 IPI:IPI00008034 RefSeq:NP_057361.3
RefSeq:NP_899050.1 UniGene:Hs.555016 ProteinModelPortal:Q9ULC3
SMR:Q9ULC3 IntAct:Q9ULC3 STRING:Q9ULC3 PhosphoSite:Q9ULC3
DMDM:12643897 PaxDb:Q9ULC3 PRIDE:Q9ULC3 DNASU:51715
Ensembl:ENST00000317483 Ensembl:ENST00000468148 GeneID:51715
KEGG:hsa:51715 UCSC:uc003pds.3 CTD:51715 GeneCards:GC06M057100
HGNC:HGNC:14263 HPA:HPA029135 HPA:HPA029136 MIM:201000 MIM:606144
neXtProt:NX_Q9ULC3 Orphanet:65759 PharmGKB:PA34113
HOVERGEN:HBG100144 InParanoid:Q9ULC3 KO:K06234 OMA:VTEVFKY
OrthoDB:EOG4P2Q33 PhylomeDB:Q9ULC3 GenomeRNAi:51715 NextBio:55759
Bgee:Q9ULC3 CleanEx:HS_RAB23 Genevestigator:Q9ULC3
GermOnline:ENSG00000112210 GO:GO:0021513 Uniprot:Q9ULC3
Length = 237
Score = 276 (102.2 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 69/213 (32%), Positives = 115/213 (53%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
+ + E K++V+G GK+S+I+RY F+ Y+ TIGVDF + + + E + RL
Sbjct: 2 LEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDV-RL 60
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
LWD AGQE F +T+ YY+ A +VF T +F+AV W++ + A+V G+ IP
Sbjct: 61 MLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEV----GD-IP 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
VL+ NK D + N + + K ++ TS K+++N+++ K L +K L+
Sbjct: 116 TVLVQNKIDLLDDSCIKNE-EAEALAKRLKLR-FYRTSVKEDLNVNEVFKYLAEKYLQKL 173
Query: 631 KVQANGD---SHATSEAVFSLNRNSQETKNGRN 660
K Q D +H++S + N S + +G+N
Sbjct: 174 KQQIAEDPELTHSSSNKIGVFN-TSGGSHSGQN 205
Score = 39 (18.8 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 645 VFSLNRNSQETKNGRN 660
V +L N Q TK RN
Sbjct: 214 VINLRPNKQRTKKNRN 229
>DICTYBASE|DDB_G0285051 [details] [associations]
symbol:rab32D "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
dictyBase:DDB_G0285051 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GenomeReviews:CM000153_GR GO:GO:0015031
EMBL:AAFI02000073 PROSITE:PS51419 eggNOG:COG1100 KO:K07976
HSSP:P20339 RefSeq:XP_639910.1 ProteinModelPortal:Q54P07
PRIDE:Q54P07 EnsemblProtists:DDB0229426 GeneID:8624822
KEGG:ddi:DDB_G0285051 OMA:NDIITHI Uniprot:Q54P07
Length = 228
Score = 293 (108.2 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 59/178 (33%), Positives = 106/178 (59%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+++IG++ GKTSI+ R + F+ Y++TIG DF K + ++ I +QLWD AGQE
Sbjct: 11 KLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTF-YQNDIITHIQLWDTAGQE 69
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP--IPCVLLANK 577
++ +T +++ + +VFD++ ++F + W + +K PDG +P +LLANK
Sbjct: 70 KYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQFKSKSINPDGTEKQLPILLLANK 129
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
D + + ++I+++ +H + ++E SAK +INI ++ LV+ I+E DK N
Sbjct: 130 SDSLTRAV--DQSEINQWCTDHKVNLYYEVSAKSSINIKESILKLVEVIIEQDKDSDN 185
>FB|FBgn0031090 [details] [associations]
symbol:Rab35 "Rab35" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0006911 GO:GO:0005811
GO:GO:0015031 EMBL:AE014298 GO:GO:0000910 HSSP:P07560
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
ChiTaRS:RAB35 FlyBase:FBgn0031090 EMBL:AY094795
RefSeq:NP_001188678.1 RefSeq:NP_608373.1 UniGene:Dm.3622 SMR:Q9W5X0
EnsemblMetazoa:FBtr0070028 EnsemblMetazoa:FBtr0303258
EnsemblMetazoa:FBtr0333549 GeneID:33014 KEGG:dme:Dmel_CG9575
UCSC:CG9575-RA InParanoid:Q9W5X0 GenomeRNAi:33014 NextBio:781524
Uniprot:Q9W5X0
Length = 201
Score = 293 (108.2 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 68/208 (32%), Positives = 120/208 (57%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI-IRLQLWD 514
+ L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + D E + ++LQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTV--DIEGMRVKLQIWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
AGQERF +T YY+ G +V+DVT +F V +W +++ + + VL+
Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDV-----VKKVLV 118
Query: 575 ANKCDQP-KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NK D P ++ + A+ F K+ + FETSAKDNIN+++ ++ +++L++ K++
Sbjct: 119 GNKNDDPDRKVVITEDAQ--RFAKQMDIE-LFETSAKDNINVENMFLSITRQVLDH-KLR 174
Query: 634 ANGDSHATSEAVFSLNRNSQETKNGRNC 661
+ + + L N + +K G+ C
Sbjct: 175 TSPNEQ--QKDTLHLKPNPKGSKGGKCC 200
>TAIR|locus:2015576 [details] [associations]
symbol:RABA1b "RAB GTPase homolog A1B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=NAS] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=TAS] [GO:0005773
"vacuole" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005774 GO:GO:0006886
GO:GO:0007264 PROSITE:PS51419 EMBL:AC051629 GO:GO:0042538
eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968 EMBL:L18883
EMBL:BT006406 EMBL:AK227865 EMBL:AY086881 IPI:IPI00537039
PIR:S59942 RefSeq:NP_173136.1 UniGene:At.324
ProteinModelPortal:Q39222 SMR:Q39222 STRING:Q39222 PaxDb:Q39222
PRIDE:Q39222 EnsemblPlants:AT1G16920.1 GeneID:838263
KEGG:ath:AT1G16920 TAIR:At1g16920 InParanoid:Q39222 OMA:QIYRITS
PhylomeDB:Q39222 ProtClustDB:CLSN2914413 Genevestigator:Q39222
GermOnline:AT1G16920 Uniprot:Q39222
Length = 216
Score = 293 (108.2 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 68/195 (34%), Positives = 116/195 (59%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
++ D ++L+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + L D + +++
Sbjct: 5 RVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK-VVK 63
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
Q+WD AGQER+ +T YY+ AVGA +V+DVTR ATF+ V +W ++L D N I
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHT---DPN-I 119
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA-AKTLVQ--KI 626
+L+ NK D + P + + E + ETSA + N++DA A+ L Q +I
Sbjct: 120 VVMLVGNKSDL--RHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRI 177
Query: 627 LENDKVQANGDSHAT 641
+V+A D +A+
Sbjct: 178 TSKKQVEAGEDGNAS 192
>TAIR|locus:2082269 [details] [associations]
symbol:RABA4D "RAB GTPase homolog A4D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0009860 "pollen tube growth"
evidence=RCA;IDA] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0070382 "exocytic vesicle" evidence=IDA] [GO:0048868 "pollen
tube development" evidence=IGI;RCA] [GO:0019900 "kinase binding"
evidence=IPI] [GO:0080092 "regulation of pollen tube growth"
evidence=IMP] [GO:0090404 "pollen tube tip" evidence=IDA]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA] [GO:0048610
"cellular process involved in reproduction" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0007264 EMBL:AC069473 GO:GO:0015031 GO:GO:0045177
GO:GO:0009860 GO:GO:0030659 EMBL:AP002063 PROSITE:PS51419
GO:GO:0070382 EMBL:AC069472 GO:GO:0090404 eggNOG:COG1100
GO:GO:0080092 KO:K07976 HOGENOM:HOG000233968 HSSP:P20339
EMBL:DQ056590 IPI:IPI00520600 RefSeq:NP_187823.1 UniGene:At.53275
ProteinModelPortal:Q9LH50 SMR:Q9LH50 STRING:Q9LH50 PaxDb:Q9LH50
PRIDE:Q9LH50 EnsemblPlants:AT3G12160.1 GeneID:820393
KEGG:ath:AT3G12160 TAIR:At3g12160 InParanoid:Q9LH50 OMA:RTDEDYN
PhylomeDB:Q9LH50 ProtClustDB:CLSN2684593 Genevestigator:Q9LH50
Uniprot:Q9LH50
Length = 222
Score = 293 (108.2 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 70/222 (31%), Positives = 120/222 (54%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y K ++++K+++IG+ GKT ++ R+ FS +ATIGV+F K L D++T+
Sbjct: 5 YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTV 64
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ AVGA +V+D+T+ +FD + KW ++L D N
Sbjct: 65 -KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHA---DKN 120
Query: 568 PIPCVLLANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTL---V 623
I +L+ NKCD + A+ EF + N + ETSA + N++ A T+ +
Sbjct: 121 -IVIMLIGNKCDLGSLRAVPTEDAQ--EFAQRENLF-FMETSALEATNVETAFLTILTEI 176
Query: 624 QKILENDKVQANGDSHATSEAVFSLNRN--SQETKNGRNCAC 663
+I+ + A+ D + ++ R E ++G+ C
Sbjct: 177 YRIISKKSLTADDDDADGNSSLLKGTRIIIPSEQESGKRGGC 218
>UNIPROTKB|F1RZV2 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045861 "negative regulation of proteolysis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0021513 "spinal cord dorsal/ventral patterning"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0045861
GO:GO:0042733 GO:GO:0008589 GeneTree:ENSGT00700000104457 KO:K06234
OMA:VTEVFKY GO:GO:0021513 EMBL:CT998546 EMBL:CT963091
RefSeq:XP_001929671.1 UniGene:Ssc.82033 Ensembl:ENSSSCT00000026804
GeneID:100155623 KEGG:ssc:100155623 Uniprot:F1RZV2
Length = 237
Score = 276 (102.2 bits), Expect = 3.0e-25, Sum P(2) = 3.0e-25
Identities = 68/212 (32%), Positives = 114/212 (53%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
+ + E K++V+G GK+S+I+RY F+ Y+ TIGVDF + + H+ +RL
Sbjct: 2 LEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQV-HDEDVRL 60
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
LWD AGQE F +T+ YY+ A +VF T +F+A+ W++ + A+V G+ +P
Sbjct: 61 MLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEV----GD-VP 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
VL+ NK D + N + + K+ ++ TS K+++N+++ K L +K L+
Sbjct: 116 TVLVQNKIDLLDDSCIKNE-EAEALAKKLKLR-FYRTSVKEDLNVNEVFKYLAEKYLQKL 173
Query: 631 KVQANGDS---HATSE--AVFSLNRNSQETKN 657
K Q D H++S VFS + S +N
Sbjct: 174 KQQIAEDPESMHSSSNKIGVFSTSAGSHLGRN 205
Score = 38 (18.4 bits), Expect = 3.0e-25, Sum P(2) = 3.0e-25
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 645 VFSLNRNSQETKNGRN 660
V +L N Q TK RN
Sbjct: 214 VINLRPNRQRTKKNRN 229
>UNIPROTKB|F1SLJ0 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017157 "regulation of exocytosis" evidence=IEA]
[GO:0008021 "synaptic vesicle" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942 KO:K07883
OMA:QMASSQD EMBL:CU914321 EMBL:CU914659 EMBL:FP565241
RefSeq:XP_003359827.2 Ensembl:ENSSSCT00000018435 GeneID:100523703
KEGG:ssc:100523703 Uniprot:F1SLJ0
Length = 225
Score = 292 (107.8 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 66/198 (33%), Positives = 112/198 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 26 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 84
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 85 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--ILVG 140
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + + + + E +FETSAKDNIN+ + LV I DK+
Sbjct: 141 NKCDMEDERVISTER--GQHLGEQLGFEFFETSAKDNINVKQTFERLVDIIC--DKMS-- 194
Query: 636 GDSHATSEAVFSLNRNSQ 653
+S T A+ + +N++
Sbjct: 195 -ESLETDPAITAAKQNTR 211
>UNIPROTKB|I3LHP6 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030141 "secretory granule" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0030141 GO:GO:0017157 GO:GO:0018125
GeneTree:ENSGT00690000101942 OMA:WFDFFEA EMBL:CU468046
Ensembl:ENSSSCT00000028423 Uniprot:I3LHP6
Length = 228
Score = 292 (107.8 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 68/221 (30%), Positives = 123/221 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + E ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRQEKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI--KTYSWDNAQV--ILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKE---------HNFSGWFETSAKDNINIDDAAKTLVQKI 626
NKCD +E + P + + + E +++ +FE SAK+NI++ A + LV I
Sbjct: 135 NKCDMEEERVV--PTEKGQLLAEQLGMYMTYLYDWFDFFEASAKENISVRQAFERLVDAI 192
Query: 627 LENDKVQANGDSHATSEAVFSLNRNSQETKNG----RNCAC 663
DK+ D+ T +V ++N++ + +NC+C
Sbjct: 193 C--DKMS---DTLDTDPSVLGTSKNTRLSDTPPLLQQNCSC 228
>UNIPROTKB|E1BF18 [details] [associations]
symbol:RAB3C "Ras-related protein Rab-3C" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101942 EMBL:DAAA02050293
EMBL:DAAA02050288 EMBL:DAAA02050289 EMBL:DAAA02050290
EMBL:DAAA02050291 EMBL:DAAA02050292 IPI:IPI00906126
Ensembl:ENSBTAT00000054286 ArrayExpress:E1BF18 Uniprot:E1BF18
Length = 218
Score = 291 (107.5 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 71/212 (33%), Positives = 117/212 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W L+ + + I L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWS--LNQTYSWDNAQVI---LVG 133
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + + + + E +FETSAKDNIN+ + LV I DK+
Sbjct: 134 NKCDMEDERVISTER--GQHLGEQLGFEFFETSAKDNINVKQTFERLVDIIC--DKMS-- 187
Query: 636 GDSHATSEAVFSLNRNSQ--ETKNGR--NCAC 663
+S T A+ + +N++ ET NC C
Sbjct: 188 -ESLETDPAITAAKQNTRLKETPPPPQPNCGC 218
>MGI|MGI:1916865 [details] [associations]
symbol:Rab15 "RAB15, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1916865
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4HDSVG EMBL:BC027769
IPI:IPI00170032 UniGene:Mm.172847 ProteinModelPortal:Q8K386
SMR:Q8K386 IntAct:Q8K386 STRING:Q8K386 PhosphoSite:Q8K386
PaxDb:Q8K386 PRIDE:Q8K386 InParanoid:Q8K386 CleanEx:MM_RAB15
Genevestigator:Q8K386 GermOnline:ENSMUSG00000021062 Uniprot:Q8K386
Length = 212
Score = 291 (107.5 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 66/214 (30%), Positives = 124/214 (57%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYV-HQFFSPHYRATIGVDFALKVLSWDHETIIR 509
M + + L+++L+IG+ G GKT ++ R+ ++F S H +TIGVDF +K + D + R
Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHI-STIGVDFKMKTIDVDGIKV-R 58
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
+Q+WD AGQER+ +T+ YY+ A G F+V+D++ ++ ++KW D+D P+G +
Sbjct: 59 IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYA--PEG--V 114
Query: 570 PCVLLANKCDQP-KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NK D+ K + + + KE+ ++ETSA N+NI ++ L + +L+
Sbjct: 115 QKILIGNKADEEQKRQVGREQGQ--QLAKEYGMD-FYETSACTNLNIKESFTRLTELVLQ 171
Query: 629 NDKVQANG-DSHATSE-AVFSLNRNSQETKNGRN 660
+ + +G + A++E A+ L + + + N
Sbjct: 172 AHRKELDGLRTRASNELALAELEEDEGKPEGPAN 205
>MGI|MGI:96960 [details] [associations]
symbol:Rab8a "RAB8A, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006904
"vesicle docking involved in exocytosis" evidence=ISO] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0014069 "postsynaptic
density" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031513
"nonmotile primary cilium" evidence=ISO;IDA] [GO:0032880
"regulation of protein localization" evidence=ISO] [GO:0042384
"cilium assembly" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=ISO] [GO:0048210 "Golgi vesicle fusion to target membrane"
evidence=ISO] [GO:0051223 "regulation of protein transport"
evidence=ISO] [GO:0055037 "recycling endosome" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:96960
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 Reactome:REACT_147847 GO:GO:0007264 GO:GO:0015031
GO:GO:0055037 GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932
GO:GO:0042384 GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003
GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351 PDB:2FU5 PDBsum:2FU5
GO:GO:0048210 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:4218
KO:K07901 OMA:SNVEQHA EMBL:S53270 EMBL:AK076048 EMBL:AK079306
EMBL:AK080740 EMBL:BC019990 IPI:IPI00331128 RefSeq:NP_075615.2
UniGene:Mm.162811 ProteinModelPortal:P55258 SMR:P55258
IntAct:P55258 STRING:P55258 PhosphoSite:P55258 PaxDb:P55258
PRIDE:P55258 Ensembl:ENSMUST00000003121 GeneID:17274 KEGG:mmu:17274
EvolutionaryTrace:P55258 NextBio:291770 Bgee:P55258
CleanEx:MM_RAB8A Genevestigator:P55258
GermOnline:ENSMUSG00000003037 Uniprot:P55258
Length = 207
Score = 291 (107.5 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 65/203 (32%), Positives = 114/203 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASAD----VEKMILG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--NDKV 632
NKCD K ++ ++ ++ + ETSAK NIN+++A TL + I + K+
Sbjct: 121 NKCDVNDKRQVSKERG--EKLALDYGIK-FMETSAKANINVENAFFTLARDIKAKMDKKL 177
Query: 633 QAN---GDSHATSEAVFSLNRNS 652
+ N G SH V R S
Sbjct: 178 EGNSPQGSSHGVKITVEQQKRTS 200
>POMBASE|SPBC1703.10 [details] [associations]
symbol:ypt1 "GTPase Ypt1" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=IGI]
[GO:0005525 "GTP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IMP] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IC] [GO:0070317 "negative regulation of G0
to G1 transition" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 PomBase:SPBC1703.10 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0005634 GO:GO:0006886
GO:GO:0007264 GO:GO:0000139 GO:GO:0070317 GO:GO:0005789
EMBL:CU329671 GO:GO:0003924 GenomeReviews:CU329671_GR
PROSITE:PS51419 GO:GO:0006888 GO:GO:0006995 eggNOG:COG1100
HOGENOM:HOG000233968 KO:K07874 OMA:IDSTPVR EMBL:X52099 EMBL:X15082
PIR:S04590 PIR:T50323 RefSeq:NP_596205.1 ProteinModelPortal:P11620
SMR:P11620 STRING:P11620 PRIDE:P11620 EnsemblFungi:SPBC1703.10.1
GeneID:2539784 KEGG:spo:SPBC1703.10 OrthoDB:EOG49W5QK
NextBio:20800933 Uniprot:P11620
Length = 203
Score = 291 (107.5 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 72/209 (34%), Positives = 117/209 (55%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + +T+ +L
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G IV+DVT +F+ V +W Q++D +G +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAV--EG--VN 115
Query: 571 CVLLANKCDQ-PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ NK D K+ + + AK EF N + ETSAKD+ N++ A T+ ++I E
Sbjct: 116 RLLVGNKSDMVDKKVVEYSVAK--EFADSLNIP-FLETSAKDSTNVEQAFLTMSRQIKER 172
Query: 630 DKVQANGDSHATSEAVFSLNRN-SQETKN 657
S+A S N SQ + N
Sbjct: 173 MGNNTFASSNAKSSVKVGQGTNVSQSSSN 201
>RGD|621144 [details] [associations]
symbol:Rab8a "RAB8A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0006904 "vesicle docking involved in
exocytosis" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IDA] [GO:0019003
"GDP binding" evidence=ISO;ISS] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0031513
"nonmotile primary cilium" evidence=IEA;ISO] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042384
"cilium assembly" evidence=IEA;ISO] [GO:0043025 "neuronal cell
body" evidence=IDA] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IDA;IMP] [GO:0048210 "Golgi vesicle
fusion to target membrane" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0051223
"regulation of protein transport" evidence=IDA;IMP] [GO:0055037
"recycling endosome" evidence=IEA;ISO] Reactome:REACT_97881
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:621144 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0048471
GO:GO:0007264 GO:GO:0014069 GO:GO:0015031 GO:GO:0043025
GO:GO:0016023 GO:GO:0007409 PROSITE:PS51419 GO:GO:0048169
GO:GO:0051223 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031
CTD:4218 KO:K07901 EMBL:BC071176 EMBL:BC105863 EMBL:M83675
IPI:IPI00196789 PIR:A42148 RefSeq:NP_446450.2 UniGene:Rn.16064
ProteinModelPortal:P35280 SMR:P35280 STRING:P35280
PhosphoSite:P35280 PRIDE:P35280 Ensembl:ENSRNOT00000020748
GeneID:117103 KEGG:rno:117103 UCSC:RGD:621144 NextBio:619992
ArrayExpress:P35280 Genevestigator:P35280
GermOnline:ENSRNOG00000014621 Uniprot:P35280
Length = 207
Score = 291 (107.5 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 65/203 (32%), Positives = 114/203 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASAD----VEKMILG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--NDKV 632
NKCD K ++ ++ ++ + ETSAK NIN+++A TL + I + K+
Sbjct: 121 NKCDVNDKRQVSKERG--EKLALDYGIK-FMETSAKANINVENAFFTLARDIKAKMDKKL 177
Query: 633 QAN---GDSHATSEAVFSLNRNS 652
+ N G SH V R S
Sbjct: 178 EGNSPQGSSHGVKITVEQQKRTS 200
>ZFIN|ZDB-GENE-040718-428 [details] [associations]
symbol:rab3db "RAB3D, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-428
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 EMBL:CU571395
EMBL:BC075784 IPI:IPI00496059 RefSeq:NP_001002679.1
UniGene:Dr.86400 SMR:Q6DI07 Ensembl:ENSDART00000064031
GeneID:436952 KEGG:dre:436952 CTD:436952 InParanoid:Q6DI07
OMA:GHSACAC NextBio:20831379 Uniprot:Q6DI07
Length = 220
Score = 291 (107.5 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 66/208 (31%), Positives = 113/208 (54%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + +++ I +LQ+WD
Sbjct: 22 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNNKRI-KLQIWDT 80
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G ++FD+T +F+AV W + K D + +L+
Sbjct: 81 AGQERYRTITTAYYRGAMGFLLMFDITNRDSFNAVRDWATQI--KTYSWDNAQV--ILVG 136
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + P + + + +FE SAKD+IN+ + LV I + +
Sbjct: 137 NKCDLEDERLI--PTEDSQRLAHELGFQFFEASAKDSINVKQVFECLVDVICDKMTESLD 194
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
GD+ ++ SL + E + CAC
Sbjct: 195 GDAAVSNHKDCSLQDAADEGHSA--CAC 220
>CGD|CAL0003404 [details] [associations]
symbol:YPT31 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005741 "mitochondrial outer membrane" evidence=IEA]
[GO:0031505 "fungal-type cell wall organization" evidence=IEA]
[GO:0033205 "cell cycle cytokinesis" evidence=IEA] [GO:0034498
"early endosome to Golgi transport" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0006887
"exocytosis" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
CGD:CAL0003404 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0035690 eggNOG:COG1100 KO:K07976
EMBL:AACQ01000275 EMBL:AACQ01000274 RefSeq:XP_710387.1
RefSeq:XP_710395.1 ProteinModelPortal:Q59KX4 SMR:Q59KX4
STRING:Q59KX4 GeneID:3647999 GeneID:3648007 KEGG:cal:CaO19.10153
KEGG:cal:CaO19.2622 Uniprot:Q59KX4
Length = 222
Score = 290 (107.1 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 76/211 (36%), Positives = 116/211 (54%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+LYKI++IG+ G GK++++ R+ F+ R+TIGV+FA + L D + + + Q+WD
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRV-KAQIWDT 71
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ AVGA IV+D+ + ++++V +W ++L D N I L+
Sbjct: 72 AGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHA---DANII-IELVG 127
Query: 576 NKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQ 633
NK D + AK F E+N + E SA + N+D + L++ I E K Q
Sbjct: 128 NKSDLDHLRAVPTEEAK--NFAMENNLL-FTEASALSSDNVDLSFHQLLKNIYEMISKHQ 184
Query: 634 A-NGDSHATSEA---VFSLNRNSQETKNGRN 660
N DS T+ A SL QE KN N
Sbjct: 185 LENNDSKQTNTAGGPTISLTPAPQEKKNKNN 215
>DICTYBASE|DDB_G0276399 [details] [associations]
symbol:rab8B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0031157 "regulation of aggregate
size involved in sorocarp development" evidence=IMP] [GO:0016339
"calcium-dependent cell-cell adhesion" evidence=IMP] [GO:0005525
"GTP binding" evidence=IEA;ISS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0276399
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GenomeReviews:CM000151_GR PROSITE:PS51419
GO:GO:0016339 GO:GO:0031157 eggNOG:COG1100 EMBL:AAFI02000015
KO:K07976 ProtClustDB:CLSZ2430646 EMBL:M34456 PIR:B34716
RefSeq:XP_643115.1 ProteinModelPortal:P20791 SMR:P20791
PRIDE:P20791 EnsemblProtists:DDB0185216 GeneID:8620520
KEGG:ddi:DDB_G0276399 OMA:KCDINDK Uniprot:P20791
Length = 203
Score = 290 (107.1 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 60/191 (31%), Positives = 117/191 (61%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
SP + P +FL K+L+IG+ G GK+ ++ R+ F+P + ATIG+DF ++ + + +
Sbjct: 3 SPATNKPAAYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGK 62
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
I +LQ+WD AGQERF +T YY+ A+G +V+DVT +F ++ W ++++ +
Sbjct: 63 RI-KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHAS--- 118
Query: 566 GNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AKT 621
+ + +L+ NKCD ++ + ++ ++ E+ + ETSAK+++N+++A AK
Sbjct: 119 -DSVNKMLIGNKCDMTEKKVVDS-SRGKSLADEYGIK-FLETSAKNSVNVEEAFIGLAKD 175
Query: 622 LVQKILE--ND 630
+ +++++ ND
Sbjct: 176 IKKRMIDTPND 186
>FB|FBgn0015793 [details] [associations]
symbol:Rab19 "Rab19" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005097 "Rab GTPase
activator activity" evidence=ISS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014296 GO:GO:0015031
eggNOG:COG1100 GO:GO:0005097 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104044 OMA:LIGDCGT EMBL:AY071400 EMBL:D84348
RefSeq:NP_523970.1 UniGene:Dm.2555 SMR:O18339
EnsemblMetazoa:FBtr0076705 EnsemblMetazoa:FBtr0331832 GeneID:38930
KEGG:dme:Dmel_CG7062 UCSC:CG7062-RA CTD:38930 FlyBase:FBgn0015793
InParanoid:O18339 OrthoDB:EOG4PG4GW GenomeRNAi:38930 NextBio:811064
Uniprot:O18339
Length = 219
Score = 290 (107.1 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 62/173 (35%), Positives = 109/173 (63%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+FL+KI++IG+ G GKT I+ R+ + + TIGVDF++K ++ + + I +LQ+WD
Sbjct: 19 DFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQI-KLQIWDT 77
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T+ YY+ A G IV+D+T+ ++F + KW +++ + T + + +L+
Sbjct: 78 AGQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEV-RRYTASN---VLIILVG 133
Query: 576 NKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
NKCD + +E ++ ++I E F ETSAK+N+N++DA + L ++
Sbjct: 134 NKCDLEEQREVDFEEARQMCQYIPEILFV--METSAKENMNVEDAFRCLANEL 184
>GENEDB_PFALCIPARUM|PF08_0110 [details] [associations]
symbol:rab18 "PfRab18, GTPase" species:5833
"Plasmodium falciparum" [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844507 HOGENOM:HOG000233968 KO:K07910
GenomeReviews:AL844507_GR RefSeq:XP_001349449.1 HSSP:P10114
ProteinModelPortal:Q7K6B0 EnsemblProtists:PF08_0110:mRNA
GeneID:2655310 KEGG:pfa:PF08_0110 EuPathDB:PlasmoDB:PF3D7_0807300
OMA:PNISATI ProtClustDB:CLSZ2433229 Uniprot:Q7K6B0
Length = 201
Score = 290 (107.1 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 75/214 (35%), Positives = 120/214 (56%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
K +K ++L K+L++G+ GK+SI+ RY F +TIG+DF +K L D++TI +
Sbjct: 2 KNKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTI-K 60
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
+ +WD AGQERF +T YY+ A +V+D T +F+ + W ++D T + N I
Sbjct: 61 VGIWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENLDVWINEIDKYST--NKNAI 118
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ANK D+P + + K F E+N + ETSAK++INI + L+Q+IL N
Sbjct: 119 K-MLVANKIDKPNHEVTKDEGK--NFAFENNML-FCETSAKNDINITYCFEELIQQILNN 174
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ S T L + +E+++ NCAC
Sbjct: 175 PSLLEL--SIVTKN--LKLGKK-EESRS--NCAC 201
>UNIPROTKB|F1N908 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0005546 "phosphatidylinositol-4,5-bisphosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=IEA] [GO:0031253 "cell projection membrane"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0045334 "clathrin-coated endocytic vesicle" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:AADN02043195
EMBL:AADN02043196 IPI:IPI00651222 Ensembl:ENSGALT00000011828
Uniprot:F1N908
Length = 201
Score = 290 (107.1 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 64/201 (31%), Positives = 106/201 (52%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +LQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGDYITTIGVDFKIRTVEINGEKV-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +L+
Sbjct: 65 AGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-----DDVCRILVG 119
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NK D P+ + +F + FETSAK+NIN+++ + + +L K
Sbjct: 120 NKNDDPERKVVETEDAY-KFAGQMEIQ-LFETSAKENINVEEMFNCITELVLRAKKENLA 177
Query: 636 GDSHATSEAVFSLNRNSQETK 656
V L +NS+ K
Sbjct: 178 KQQQQQQNDVVKLTKNSKRKK 198
>UNIPROTKB|H0YEA4 [details] [associations]
symbol:RAB38 "Ras-related protein Rab-38" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525
GO:GO:0007264 HGNC:HGNC:9776 EMBL:AP001642 EMBL:AP005436
Ensembl:ENST00000531138 Uniprot:H0YEA4
Length = 89
Score = 290 (107.1 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 58/81 (71%), Positives = 67/81 (82%)
Query: 440 GSSKEVSPYSKM--PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFAL 497
G ++ V P ++M P K E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFAL
Sbjct: 7 GQARHVWPAARMQAPHK-EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFAL 65
Query: 498 KVLSWDHETIIRLQLWDIAGQ 518
KVL WD ET++RLQLWDIAG+
Sbjct: 66 KVLHWDPETVVRLQLWDIAGK 86
>UNIPROTKB|O95716 [details] [associations]
symbol:RAB3D "Ras-related protein Rab-3D" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0030133
"transport vesicle" evidence=IEA] [GO:0042588 "zymogen granule"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
OrthoDB:EOG4TB4C6 EMBL:AF081353 EMBL:AF498933 EMBL:BC016471
IPI:IPI00032808 RefSeq:NP_004274.1 UniGene:Hs.731663 PDB:2GF9
PDBsum:2GF9 ProteinModelPortal:O95716 SMR:O95716 IntAct:O95716
STRING:O95716 PhosphoSite:O95716 PaxDb:O95716 PRIDE:O95716
DNASU:9545 Ensembl:ENST00000222120 GeneID:9545 KEGG:hsa:9545
UCSC:uc002mqx.3 CTD:9545 GeneCards:GC19M011435 HGNC:HGNC:9779
HPA:CAB018067 MIM:604350 neXtProt:NX_O95716 PharmGKB:PA34134
InParanoid:O95716 KO:K07884 OMA:GKGPTLG PhylomeDB:O95716
EvolutionaryTrace:O95716 GenomeRNAi:9545 NextBio:35795 Bgee:O95716
CleanEx:HS_RAB3D Genevestigator:O95716 GermOnline:ENSG00000105514
Uniprot:O95716
Length = 219
Score = 290 (107.1 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 63/204 (30%), Positives = 109/204 (53%)
Query: 437 ITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFA 496
+ + + P ++++K+L+IG GKTS + RY F+P + +T+G+DF
Sbjct: 1 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
Query: 497 LKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQD 556
+K + + H+ I+LQ+WD AGQER+ +T YY+ A+G +++D+ +F AV W
Sbjct: 61 VKTV-YRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQ 119
Query: 557 LDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINID 616
+ K D + +L+ NKCD E + PA+ + + +FE SAK+NIN+
Sbjct: 120 I--KTYSWDNAQV--ILVGNKCDLEDERVV--PAEDGRRLADDLGFEFFEASAKENINVK 173
Query: 617 DAAKTLVQKILE--NDKVQANGDS 638
+ LV I E N+ ++ + S
Sbjct: 174 QVFERLVDVICEKMNESLEPSSSS 197
>UNIPROTKB|Q6IQ22 [details] [associations]
symbol:RAB12 "Ras-related protein Rab-12" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0005765 "lysosomal membrane"
evidence=IEA] [GO:0008333 "endosome to lysosome transport"
evidence=ISS] [GO:0044257 "cellular protein catabolic process"
evidence=ISS] [GO:0005764 "lysosome" evidence=ISS] [GO:0055038
"recycling endosome membrane" evidence=ISS] [GO:0019003 "GDP
binding" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0005764 EMBL:CH471113 GO:GO:0008333
PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
GO:GO:0044257 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG45757M EMBL:AP001793 EMBL:BC050338 EMBL:BC071600
EMBL:BC098407 IPI:IPI00419932 RefSeq:NP_001020471.2
UniGene:Hs.270074 PDB:2IL1 PDBsum:2IL1 ProteinModelPortal:Q6IQ22
SMR:Q6IQ22 STRING:Q6IQ22 PhosphoSite:Q6IQ22 DMDM:122064944
PaxDb:Q6IQ22 PRIDE:Q6IQ22 DNASU:201475 Ensembl:ENST00000329286
GeneID:201475 KEGG:hsa:201475 UCSC:uc002knp.3 CTD:201475
GeneCards:GC18P008600 HGNC:HGNC:31332 HPA:HPA040727
neXtProt:NX_Q6IQ22 PharmGKB:PA142671102 InParanoid:Q6IQ22 KO:K07907
OMA:CEVDREI ChiTaRS:RAB12 EvolutionaryTrace:Q6IQ22
GenomeRNAi:201475 NextBio:90147 Bgee:Q6IQ22 CleanEx:HS_RAB12
Genevestigator:Q6IQ22 Uniprot:Q6IQ22
Length = 244
Score = 290 (107.1 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 69/200 (34%), Positives = 108/200 (54%)
Query: 432 AGKTSITNGSSKEVSPYSKMPDK-REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRAT 490
AG +++ G + K P + +F ++++IG G GKTS+++R+ F ++T
Sbjct: 19 AGSPALSGGQGRR----RKQPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKST 74
Query: 491 IGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAV 550
+GVDF +K + + I RLQ+WD AGQERF ++T YY+ A G +V+D+T+ TFD +
Sbjct: 75 VGVDFKIKTVELRGKKI-RLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDL 133
Query: 551 LKWKQDLDAKVTLPDGNPIPCVLLANK--CDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
KW + +D K D +L+ NK C+ +E K + I F E S
Sbjct: 134 PKWMKMID-KYASEDAE---LLLVGNKLDCETDREITRQQGEKFAQQITGMRFC---EAS 186
Query: 609 AKDNINIDDAAKTLVQKILE 628
AKDN N+D+ LV IL+
Sbjct: 187 AKDNFNVDEIFLKLVDDILK 206
>UNIPROTKB|Q59KX4 [details] [associations]
symbol:YPT31 "Likely rab family GTP-binding protein"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0003404 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0035690 eggNOG:COG1100 KO:K07976
EMBL:AACQ01000275 EMBL:AACQ01000274 RefSeq:XP_710387.1
RefSeq:XP_710395.1 ProteinModelPortal:Q59KX4 SMR:Q59KX4
STRING:Q59KX4 GeneID:3647999 GeneID:3648007 KEGG:cal:CaO19.10153
KEGG:cal:CaO19.2622 Uniprot:Q59KX4
Length = 222
Score = 290 (107.1 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 76/211 (36%), Positives = 116/211 (54%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+LYKI++IG+ G GK++++ R+ F+ R+TIGV+FA + L D + + + Q+WD
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRV-KAQIWDT 71
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ AVGA IV+D+ + ++++V +W ++L D N I L+
Sbjct: 72 AGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHA---DANII-IELVG 127
Query: 576 NKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQ 633
NK D + AK F E+N + E SA + N+D + L++ I E K Q
Sbjct: 128 NKSDLDHLRAVPTEEAK--NFAMENNLL-FTEASALSSDNVDLSFHQLLKNIYEMISKHQ 184
Query: 634 A-NGDSHATSEA---VFSLNRNSQETKNGRN 660
N DS T+ A SL QE KN N
Sbjct: 185 LENNDSKQTNTAGGPTISLTPAPQEKKNKNN 215
>UNIPROTKB|Q7K6B0 [details] [associations]
symbol:rab18 "PfRab18, GTPase" species:36329 "Plasmodium
falciparum 3D7" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844507 HOGENOM:HOG000233968 KO:K07910
GenomeReviews:AL844507_GR RefSeq:XP_001349449.1 HSSP:P10114
ProteinModelPortal:Q7K6B0 EnsemblProtists:PF08_0110:mRNA
GeneID:2655310 KEGG:pfa:PF08_0110 EuPathDB:PlasmoDB:PF3D7_0807300
OMA:PNISATI ProtClustDB:CLSZ2433229 Uniprot:Q7K6B0
Length = 201
Score = 290 (107.1 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 75/214 (35%), Positives = 120/214 (56%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
K +K ++L K+L++G+ GK+SI+ RY F +TIG+DF +K L D++TI +
Sbjct: 2 KNKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTI-K 60
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
+ +WD AGQERF +T YY+ A +V+D T +F+ + W ++D T + N I
Sbjct: 61 VGIWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENLDVWINEIDKYST--NKNAI 118
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ANK D+P + + K F E+N + ETSAK++INI + L+Q+IL N
Sbjct: 119 K-MLVANKIDKPNHEVTKDEGK--NFAFENNML-FCETSAKNDINITYCFEELIQQILNN 174
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ S T L + +E+++ NCAC
Sbjct: 175 PSLLEL--SIVTKN--LKLGKK-EESRS--NCAC 201
>MGI|MGI:1914545 [details] [associations]
symbol:Rab3c "RAB3C, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1914545 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 HOGENOM:HOG000233968 OrthoDB:EOG4TB4C6 CTD:115827
KO:K07883 OMA:QMASSQD EMBL:AJ310532 EMBL:AF312037 EMBL:AY026947
EMBL:AK014132 IPI:IPI00316495 RefSeq:NP_076341.1 UniGene:Mm.151600
ProteinModelPortal:P62823 SMR:P62823 IntAct:P62823 STRING:P62823
PhosphoSite:P62823 PaxDb:P62823 PRIDE:P62823
Ensembl:ENSMUST00000167824 GeneID:67295 KEGG:mmu:67295
InParanoid:P62823 ChiTaRS:RAB3C NextBio:324148 Bgee:P62823
CleanEx:MM_RAB3C Genevestigator:P62823
GermOnline:ENSMUSG00000021700 Uniprot:P62823
Length = 227
Score = 290 (107.1 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 70/212 (33%), Positives = 117/212 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--ILAG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + + + ++ F +FETSAKDNIN+ + LV I DK+
Sbjct: 143 NKCDMEDERVVSTE-RGQRLGEQLGFE-FFETSAKDNINVKQTFERLVDIIC--DKMS-- 196
Query: 636 GDSHATSEAVFSLNRNSQ--ETKNGR--NCAC 663
+S T A+ + ++++ ET NC C
Sbjct: 197 -ESLETDPAITAAKQSTRLKETPPPPQPNCGC 227
>RGD|620923 [details] [associations]
symbol:Rab3c "RAB3C, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007269 "neurotransmitter
secretion" evidence=TAS] [GO:0008021 "synaptic vesicle"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=TAS] [GO:0017156
"calcium ion-dependent exocytosis" evidence=TAS] [GO:0017157
"regulation of exocytosis" evidence=IEA;ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620923 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017156 PROSITE:PS51419 GO:GO:0007269
eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6
CTD:115827 KO:K07883 OMA:QMASSQD EMBL:D78197 EMBL:U54807
EMBL:U37099 IPI:IPI00209150 PIR:JC5066 RefSeq:NP_598220.1
UniGene:Rn.11037 ProteinModelPortal:P62824 SMR:P62824 STRING:P62824
PhosphoSite:P62824 PRIDE:P62824 Ensembl:ENSRNOT00000015871
GeneID:171058 KEGG:rno:171058 InParanoid:P62824 NextBio:621629
Genevestigator:P62824 GermOnline:ENSRNOG00000011623 Uniprot:P62824
Length = 227
Score = 290 (107.1 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 70/212 (33%), Positives = 117/212 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--ILAG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + + + ++ F +FETSAKDNIN+ + LV I DK+
Sbjct: 143 NKCDMEDERVVSTE-RGQRLGEQLGFE-FFETSAKDNINVKQTFERLVDIIC--DKMS-- 196
Query: 636 GDSHATSEAVFSLNRNSQ--ETKNGR--NCAC 663
+S T A+ + ++++ ET NC C
Sbjct: 197 -ESLETDPAITAAKQSTRLKETPPPPQPNCGC 227
>ZFIN|ZDB-GENE-031118-188 [details] [associations]
symbol:rab11al "RAB11a, member RAS oncogene family,
like" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-031118-188
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560
KO:K07904 EMBL:BC055141 IPI:IPI00491156 RefSeq:NP_956417.1
UniGene:Dr.79024 ProteinModelPortal:Q7SY35 SMR:Q7SY35 STRING:Q7SY35
PRIDE:Q7SY35 GeneID:386994 KEGG:dre:386994 CTD:386994
InParanoid:Q7SY35 OrthoDB:EOG4C87T9 NextBio:20814108
ArrayExpress:Q7SY35 Bgee:Q7SY35 Uniprot:Q7SY35
Length = 216
Score = 290 (107.1 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 69/217 (31%), Positives = 127/217 (58%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + + + +T+ + Q+
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTV-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+ + T++ +W ++L D N I +
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHA---DSN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTL---VQKILE 628
L+ NK D + + + AK F ++H S + ETSA D+ N++ A +T+ + +I+
Sbjct: 121 LVGNKSDLRHLRAVPMDEAKA--FAEKHGLS-FLETSALDSSNVELAFQTILTEIYRIVS 177
Query: 629 NDKVQANGD-SHATSEAVFSLNRNSQETKN-GRNCAC 663
++ GD S + S V + Q T+N G+ AC
Sbjct: 178 QRQMSGRGDDSFSPSSKVVPIT--VQPTQNSGKQSAC 212
>TAIR|locus:2202280 [details] [associations]
symbol:ARA-2 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0003924 "GTPase
activity" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0007264 GO:GO:0009733
GO:GO:0015031 GO:GO:0003924 EMBL:AC068143 PROSITE:PS51419
eggNOG:COG1100 UniGene:At.133 UniGene:At.24592 KO:K07976
EMBL:D01024 EMBL:AF332428 EMBL:AY065306 EMBL:AY096439
IPI:IPI00533864 PIR:JS0639 RefSeq:NP_172128.1
ProteinModelPortal:P28185 SMR:P28185 STRING:P28185 PaxDb:P28185
PRIDE:P28185 EnsemblPlants:AT1G06400.1 GeneID:837151
KEGG:ath:AT1G06400 TAIR:At1g06400 HOGENOM:HOG000233968
InParanoid:P28185 OMA:HATFENA PhylomeDB:P28185
ProtClustDB:CLSN2914143 Genevestigator:P28185 GermOnline:AT1G06400
Uniprot:P28185
Length = 216
Score = 289 (106.8 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 63/189 (33%), Positives = 111/189 (58%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
++ ++L+K+++IG+ G GK++++ R+ F+ ++TIGV+FA K + + +++ Q+
Sbjct: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK-VVKAQI 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +++DVTR ATF+ +W ++L D N I +
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHT---DPN-IVVM 122
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA---AKTLVQKILEN 629
L+ NKCD + +A + F + + + ETSA D N+++A T + KI+
Sbjct: 123 LIGNKCDL-RHLVAVKTEEAKAFAERESLY-FMETSALDATNVENAFTEVLTQIHKIVSK 180
Query: 630 DKVQANGDS 638
V G+S
Sbjct: 181 RSVDGGGES 189
>WB|WBGene00004272 [details] [associations]
symbol:rab-8 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0030538 "embryonic genitalia
morphogenesis" evidence=IMP] [GO:0010008 "endosome membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0009792 GO:GO:0006915 GO:GO:0007264 GO:GO:0003924
GO:GO:0071688 GO:GO:0048477 GO:GO:0009306 GO:GO:0010008
GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 289 (106.8 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 59/185 (31%), Positives = 114/185 (61%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + W ++++ + + +++
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAA----SDVERMIIG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI---LENDK 631
NKCD + + ++ + ++ E+ + + ETSAK N+NID+A TL + I +E ++
Sbjct: 121 NKCDIEERREVSRDRG--EQLAIEYG-TKFLETSAKANLNIDEAFFTLARDIKSKMEQNE 177
Query: 632 VQANG 636
++A G
Sbjct: 178 MRAGG 182
>UNIPROTKB|G5EFC1 [details] [associations]
symbol:rab-8 "Rab8" species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009792 GO:GO:0006915
GO:GO:0007264 GO:GO:0003924 GO:GO:0071688 GO:GO:0048477
GO:GO:0009306 GO:GO:0010008 GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 289 (106.8 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 59/185 (31%), Positives = 114/185 (61%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + W ++++ + + +++
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAA----SDVERMIIG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI---LENDK 631
NKCD + + ++ + ++ E+ + + ETSAK N+NID+A TL + I +E ++
Sbjct: 121 NKCDIEERREVSRDRG--EQLAIEYG-TKFLETSAKANLNIDEAFFTLARDIKSKMEQNE 177
Query: 632 VQANG 636
++A G
Sbjct: 178 MRAGG 182
>ZFIN|ZDB-GENE-040718-293 [details] [associations]
symbol:rab11bb "RAB11B, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-293
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 GeneTree:ENSGT00690000101664 KO:K07905
OMA:ERSAHDE EMBL:AL929146 EMBL:CU469531 EMBL:BC076247
IPI:IPI00489756 RefSeq:NP_001002555.1 RefSeq:XP_003198017.1
RefSeq:XP_003198018.1 UniGene:Dr.84381 SMR:Q6DGU2 STRING:Q6DGU2
Ensembl:ENSDART00000036452 Ensembl:ENSDART00000123392
GeneID:100536606 GeneID:436828 KEGG:dre:100536606 KEGG:dre:436828
CTD:436828 InParanoid:Q6DGU2 NextBio:20831260 Uniprot:Q6DGU2
Length = 218
Score = 289 (106.8 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 65/193 (33%), Positives = 118/193 (61%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ +FL+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + + D +TI + Q+
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+ + T++ V +W ++L D N I +
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA---DNN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI--LEN 629
L+ NK D + + + A+ F +++N S + ETSA D+ N+++A K ++ +I + +
Sbjct: 121 LVGNKSDLRHLRAVPTDEARA--FAEKNNLS-FIETSALDSTNVEEAFKNILTEIYRIVS 177
Query: 630 DKVQANGDSHATS 642
K A +H S
Sbjct: 178 QKQIAERSAHDES 190
>ZFIN|ZDB-GENE-090312-110 [details] [associations]
symbol:si:ch73-131e21.5 "si:ch73-131e21.5"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-090312-110
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM OMA:VESYIST
EMBL:CU467849 IPI:IPI00496910 UniGene:Dr.52596
Ensembl:ENSDART00000074083 Uniprot:B8JLC8
Length = 201
Score = 289 (106.8 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 67/211 (31%), Positives = 117/211 (55%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G +V+DVT +F+ V +W Q++D + + N +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID-RYASENVNKL- 117
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
L+ NKCD + + + A EF + + ETSAK + N++ A T+ +I
Sbjct: 118 --LVGNKCDLTTKKVVDYTAA-KEFADSLSIP-FLETSAKSSTNVEQAFMTMAAEI---K 170
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNC 661
K G + ++ ++ +T +G C
Sbjct: 171 KRMGPGATAGAEKSNLKIHSTPVKTSSGGCC 201
>CGD|CAL0006268 [details] [associations]
symbol:YPT72 species:5476 "Candida albicans" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0000324 "fungal-type vacuole"
evidence=IDA] [GO:0007033 "vacuole organization" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005741 "mitochondrial
outer membrane" evidence=IEA] [GO:0036187 "cell growth mode
switching, budding to filamentous" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0061191 "positive
regulation of vacuole fusion, non-autophagic" evidence=IEA]
[GO:0030100 "regulation of endocytosis" evidence=IEA] [GO:0045324
"late endosome to vacuole transport" evidence=IEA] [GO:0007035
"vacuolar acidification" evidence=IEA] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=IEA] [GO:0034727 "piecemeal microautophagy
of nucleus" evidence=IEA] [GO:0031321 "ascospore-type prospore
assembly" evidence=IEA] [GO:0000011 "vacuole inheritance"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0051469
"vesicle fusion with vacuole" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0006268 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0071216 GO:GO:0036180 GO:GO:0009405
EMBL:AACQ01000095 GO:GO:0015031 GO:GO:0000324 GO:GO:0007033
eggNOG:COG1100 GO:GO:0036187 KO:K07897 RefSeq:XP_714835.1
ProteinModelPortal:Q59ZB7 SMR:Q59ZB7 STRING:Q59ZB7 GeneID:3643523
KEGG:cal:CaO19.2245 Uniprot:Q59ZB7
Length = 217
Score = 288 (106.4 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 60/215 (27%), Positives = 117/215 (54%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+++ L K++++G+ G GKTS+++++V+ FS Y+ATIG DF K ++ D+ + LQ+W
Sbjct: 6 RKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSVTLQIW 65
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A + FDVT + + + WK + + + + P ++
Sbjct: 66 DTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFII 125
Query: 574 LANKCD-QPKEGIANNPAKIDEFIKEHNFSGW----FETSAKDNINIDDAAKTLVQKILE 628
+ NK D + I + K++ I + G FETSAKD +N++ A + + + L+
Sbjct: 126 IGNKIDVDDSKKIPSLSKKLNN-ITNNQMGGLNYPVFETSAKDGVNVEAAFEVIAKMALQ 184
Query: 629 NDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+++ A+ + + ++N + + C C
Sbjct: 185 QEELNASNGNDVNDDYNDAINIHLDSEASA--CGC 217
>UNIPROTKB|A4FV54 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0019003
"GDP binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0017137 "Rab GTPase binding" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0048210 "Golgi vesicle fusion to target
membrane" evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0031513 "nonmotile primary cilium" evidence=IEA] [GO:0006904
"vesicle docking involved in exocytosis" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0055037
GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932 GO:GO:0042384
GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003 GO:GO:0031513
GO:GO:0006904 HOVERGEN:HBG009351 GO:GO:0048210 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031 EMBL:BC123755
IPI:IPI00718035 RefSeq:NP_001098951.1 UniGene:Bt.9871
ProteinModelPortal:A4FV54 SMR:A4FV54 STRING:A4FV54 PRIDE:A4FV54
Ensembl:ENSBTAT00000021408 GeneID:100125881 KEGG:bta:100125881
CTD:4218 InParanoid:A4FV54 KO:K07901 OMA:CDANDKR NextBio:20788864
Uniprot:A4FV54
Length = 207
Score = 288 (106.4 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 62/207 (29%), Positives = 114/207 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASAD----VEKMILG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKCD K ++ ++ ++ + ETSAK NIN+++A TL + I +
Sbjct: 121 NKCDVNDKRQVSKERG--EKLALDYGIK-FMETSAKANINVENAFYTLARDIKAKMDKKL 177
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNC 661
G+S S + + Q+ + C
Sbjct: 178 EGNSPQGSNQGVKITPDQQKRSSFFRC 204
>UNIPROTKB|P59190 [details] [associations]
symbol:RAB15 "Ras-related protein Rab-15" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL139022 HOGENOM:HOG000233968 CTD:376267 KO:K07908 OMA:HNITETF
EMBL:BC040679 EMBL:BX248046 IPI:IPI00383449 IPI:IPI00394882
RefSeq:NP_941959.1 UniGene:Hs.512492 ProteinModelPortal:P59190
SMR:P59190 IntAct:P59190 STRING:P59190 PhosphoSite:P59190
DMDM:27734452 PaxDb:P59190 PRIDE:P59190 DNASU:376267
Ensembl:ENST00000267512 Ensembl:ENST00000533601 GeneID:376267
KEGG:hsa:376267 UCSC:uc001xhz.2 UCSC:uc021rut.1
GeneCards:GC14M065412 HGNC:HGNC:20150 HPA:HPA041177
neXtProt:NX_P59190 PharmGKB:PA134901572 GenomeRNAi:376267
NextBio:100634 ArrayExpress:P59190 Bgee:P59190 CleanEx:HS_RAB15
Genevestigator:P59190 Uniprot:P59190
Length = 212
Score = 288 (106.4 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 61/188 (32%), Positives = 111/188 (59%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYV-HQFFSPHYRATIGVDFALKVLSWDHETIIR 509
M + + L+++L+IG+ G GKT ++ R+ ++F S H +TIGVDF +K + D + R
Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHI-STIGVDFKMKTIEVDGIKV-R 58
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
+Q+WD AGQER+ +T+ YY+ A G F+V+D++ ++ ++KW D+D P+G +
Sbjct: 59 IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYA--PEG--V 114
Query: 570 PCVLLANKCDQP-KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NK D+ K + + + KE+ ++ETSA N+NI ++ L + +L+
Sbjct: 115 QKILIGNKADEEQKRQVGREQGQ--QLAKEYGMD-FYETSACTNLNIKESFTRLTELVLQ 171
Query: 629 NDKVQANG 636
+ + G
Sbjct: 172 AHRKELEG 179
>UNIPROTKB|Q15286 [details] [associations]
symbol:RAB35 "Ras-related protein Rab-35" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008104 "protein localization" evidence=IMP] [GO:0045171
"intercellular bridge" evidence=IDA] [GO:0005905 "coated pit"
evidence=IDA] [GO:0031253 "cell projection membrane" evidence=IDA]
[GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0008104 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
GO:GO:0005905 EMBL:CH471054 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
EMBL:AC004812 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
PDB:3TW8 PDBsum:3TW8 GO:GO:0031253 HOGENOM:HOG000233968 EMBL:X79781
EMBL:AF498960 EMBL:BT020024 EMBL:CR536486 EMBL:CR541683
EMBL:AK304620 EMBL:AK312538 EMBL:BC015931 IPI:IPI00300096
IPI:IPI00953892 PIR:JC2488 RefSeq:NP_001161078.1 RefSeq:NP_006852.1
UniGene:Hs.524788 ProteinModelPortal:Q15286 SMR:Q15286
IntAct:Q15286 MINT:MINT-1370578 STRING:Q15286 PhosphoSite:Q15286
DMDM:3024525 PaxDb:Q15286 PRIDE:Q15286 DNASU:11021
Ensembl:ENST00000229340 Ensembl:ENST00000534951 GeneID:11021
KEGG:hsa:11021 UCSC:uc001txm.2 CTD:11021 GeneCards:GC12M120532
HGNC:HGNC:9774 MIM:604199 neXtProt:NX_Q15286 PharmGKB:PA34127
InParanoid:Q15286 KO:K07876 OMA:NCDVVNR OrthoDB:EOG4QVCD5
GenomeRNAi:11021 NextBio:41874 ArrayExpress:Q15286 Bgee:Q15286
CleanEx:HS_RAB35 Genevestigator:Q15286 GermOnline:ENSG00000111737
Uniprot:Q15286
Length = 201
Score = 288 (106.4 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 63/201 (31%), Positives = 106/201 (52%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +LQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +L+
Sbjct: 65 AGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-----DDVCRILVG 119
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NK D P+ + +F + FETSAK+N+N+++ + + +L K
Sbjct: 120 NKNDDPERKVVETEDAY-KFAGQMGIQ-LFETSAKENVNVEEMFNCITELVLRAKKDNLA 177
Query: 636 GDSHATSEAVFSLNRNSQETK 656
V L +NS+ K
Sbjct: 178 KQQQQQQNDVVKLTKNSKRKK 198
>UNIPROTKB|Q96AH8 [details] [associations]
symbol:RAB7B "Ras-related protein Rab-7b" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0045654 "positive regulation of
megakaryocyte differentiation" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IMP] [GO:0005770
"late endosome" evidence=IDA] [GO:0005802 "trans-Golgi network"
evidence=IDA] [GO:0034499 "late endosome to Golgi transport"
evidence=IMP] [GO:0034164 "negative regulation of toll-like
receptor 9 signaling pathway" evidence=ISS] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IMP] [GO:0005764
"lysosome" evidence=IDA] [GO:0034144 "negative regulation of
toll-like receptor 4 signaling pathway" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0032755 GO:GO:0005764 GO:GO:0005770 GO:GO:0005802
GO:GO:0051092 GO:GO:0045654 PROSITE:PS51419 HOVERGEN:HBG009351
GO:GO:0034499 GO:GO:0034144 CTD:338382 KO:K07898 GO:GO:0034164
EMBL:AY094596 EMBL:BC017092 IPI:IPI00059444 RefSeq:NP_001157994.1
RefSeq:NP_796377.3 UniGene:Hs.534612 ProteinModelPortal:Q96AH8
SMR:Q96AH8 IntAct:Q96AH8 PhosphoSite:Q96AH8 DMDM:50401122
PRIDE:Q96AH8 GeneID:338382 KEGG:hsa:338382 GeneCards:GC01U901021
HGNC:HGNC:30513 neXtProt:NX_Q96AH8 PharmGKB:PA134940117
GenomeRNAi:338382 NextBio:96961 CleanEx:HS_RAB7B
Genevestigator:Q96AH8 Uniprot:Q96AH8
Length = 199
Score = 288 (106.4 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 66/196 (33%), Positives = 110/196 (56%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P K+ L K++++G +G GKTS++ +YVH+ F Y+ T+G K++ +T ++LQ
Sbjct: 3 PRKKVDL-KLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILG-DTTLKLQ 60
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD GQERF +M +YK + G + FDVT +F+A+ W+ D+ AK+ +P P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKI-VPMEQSYPM 119
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLL NK D + A+ + +E + +FE SAK++IN+ A + L + L +
Sbjct: 120 VLLGNKIDLADRKVPQEVAQ--GWCREKDIP-YFEVSAKNDINVVQAFEMLASRALS--R 174
Query: 632 VQANGDSHATSEAVFS 647
Q+ ++H T S
Sbjct: 175 YQSILENHLTESIKLS 190
>UNIPROTKB|F2Z4Z0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
EMBL:CU062612 RefSeq:NP_001230220.1 UniGene:Ssc.17391
UniGene:Ssc.99380 ProteinModelPortal:F2Z4Z0 SMR:F2Z4Z0 PRIDE:F2Z4Z0
Ensembl:ENSSSCT00000010847 GeneID:100151805 KEGG:ssc:100151805
Uniprot:F2Z4Z0
Length = 201
Score = 288 (106.4 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 63/201 (31%), Positives = 106/201 (52%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +LQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +L+
Sbjct: 65 AGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-----DDVCRILVG 119
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NK D P+ + +F + FETSAK+N+N+++ + + +L K
Sbjct: 120 NKNDDPERKVVETEDAY-KFAGQMGIQ-LFETSAKENVNVEEMFNCITELVLRAKKDNLA 177
Query: 636 GDSHATSEAVFSLNRNSQETK 656
V L +NS+ K
Sbjct: 178 KQQQQQQNDVVKLTKNSKRKK 198
>UNIPROTKB|Q59ZB7 [details] [associations]
symbol:YPT7 "Likely rab family GTP-binding protein"
species:237561 "Candida albicans SC5314" [GO:0000324 "fungal-type
vacuole" evidence=IDA] [GO:0007033 "vacuole organization"
evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036180 "filamentous growth
of a population of unicellular organisms in response to biotic
stimulus" evidence=IMP] [GO:0036187 "cell growth mode switching,
budding to filamentous" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0006268 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0071216 GO:GO:0036180 GO:GO:0009405
EMBL:AACQ01000095 GO:GO:0015031 GO:GO:0000324 GO:GO:0007033
eggNOG:COG1100 GO:GO:0036187 KO:K07897 RefSeq:XP_714835.1
ProteinModelPortal:Q59ZB7 SMR:Q59ZB7 STRING:Q59ZB7 GeneID:3643523
KEGG:cal:CaO19.2245 Uniprot:Q59ZB7
Length = 217
Score = 288 (106.4 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 60/215 (27%), Positives = 117/215 (54%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+++ L K++++G+ G GKTS+++++V+ FS Y+ATIG DF K ++ D+ + LQ+W
Sbjct: 6 RKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSVTLQIW 65
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A + FDVT + + + WK + + + + P ++
Sbjct: 66 DTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFII 125
Query: 574 LANKCD-QPKEGIANNPAKIDEFIKEHNFSGW----FETSAKDNINIDDAAKTLVQKILE 628
+ NK D + I + K++ I + G FETSAKD +N++ A + + + L+
Sbjct: 126 IGNKIDVDDSKKIPSLSKKLNN-ITNNQMGGLNYPVFETSAKDGVNVEAAFEVIAKMALQ 184
Query: 629 NDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+++ A+ + + ++N + + C C
Sbjct: 185 QEELNASNGNDVNDDYNDAINIHLDSEASA--CGC 217
>MGI|MGI:1924657 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISO] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005905 "coated pit" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031253 "cell projection membrane" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0045171 "intercellular
bridge" evidence=ISO] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1924657 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0042470 GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0045171
HOVERGEN:HBG009351 GO:GO:0045334 GO:GO:0031253 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
OrthoDB:EOG4QVCD5 EMBL:BC056466 IPI:IPI00130489 RefSeq:NP_937806.1
UniGene:Mm.27553 ProteinModelPortal:Q6PHN9 SMR:Q6PHN9 IntAct:Q6PHN9
STRING:Q6PHN9 PhosphoSite:Q6PHN9 PaxDb:Q6PHN9 PRIDE:Q6PHN9
Ensembl:ENSMUST00000031492 GeneID:77407 KEGG:mmu:77407
InParanoid:Q6PHN9 ChiTaRS:RAB35 NextBio:346877 Bgee:Q6PHN9
CleanEx:MM_RAB35 Genevestigator:Q6PHN9
GermOnline:ENSMUSG00000029518 Uniprot:Q6PHN9
Length = 201
Score = 288 (106.4 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 63/201 (31%), Positives = 106/201 (52%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +LQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +L+
Sbjct: 65 AGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-----DDVCRILVG 119
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NK D P+ + +F + FETSAK+N+N+++ + + +L K
Sbjct: 120 NKNDDPERKVVETEDAY-KFAGQMGIQ-LFETSAKENVNVEEMFNCITELVLRAKKDNLA 177
Query: 636 GDSHATSEAVFSLNRNSQETK 656
V L +NS+ K
Sbjct: 178 KQQQQQQNDVVKLTKNSKRKK 198
>MGI|MGI:97844 [details] [associations]
symbol:Rab3d "RAB3D, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IDA] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IDA] [GO:0030133 "transport vesicle" evidence=ISO]
[GO:0042588 "zymogen granule" evidence=IDA] [GO:0051020 "GTPase
binding" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:97844 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
OrthoDB:EOG4TB4C6 CTD:9545 KO:K07884 OMA:GKGPTLG EMBL:M89777
EMBL:AF263365 EMBL:AF263366 EMBL:BC010779 EMBL:BC020010
IPI:IPI00116688 PIR:A45384 RefSeq:NP_114080.2 UniGene:Mm.260157
ProteinModelPortal:P35276 SMR:P35276 IntAct:P35276 STRING:P35276
PhosphoSite:P35276 PaxDb:P35276 PRIDE:P35276
Ensembl:ENSMUST00000115351 Ensembl:ENSMUST00000122211 GeneID:19340
KEGG:mmu:19340 InParanoid:P35276 NextBio:296343 Bgee:P35276
CleanEx:MM_RAB3D Genevestigator:P35276
GermOnline:ENSMUSG00000019066 Uniprot:P35276
Length = 219
Score = 288 (106.4 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 62/192 (32%), Positives = 104/192 (54%)
Query: 437 ITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFA 496
+ + S SP ++++K+L+IG GKTS + RY F+P + +T+G+DF
Sbjct: 1 MASASEPPASPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
Query: 497 LKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQD 556
+K + + H+ I+LQ+WD AGQER+ +T YY+ A+G +++D+ +F AV W
Sbjct: 61 VKTV-YRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQ 119
Query: 557 LDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINID 616
+ K D + +L+ NKCD E + PA+ + + +FE SAK+NIN+
Sbjct: 120 I--KTYSWDNAQV--ILVGNKCDLEDERVV--PAEDGRRLADDLGFEFFEASAKENINVK 173
Query: 617 DAAKTLVQKILE 628
+ LV I +
Sbjct: 174 QVFERLVDIICD 185
>RGD|1306362 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005905 "coated pit" evidence=IEA;ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0031253 "cell projection membrane"
evidence=IEA;ISO] [GO:0042470 "melanosome" evidence=IEA]
[GO:0045171 "intercellular bridge" evidence=IEA;ISO] [GO:0045334
"clathrin-coated endocytic vesicle" evidence=IEA;ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1306362 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0005905 GO:GO:0016197
GO:GO:0000910 GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
GO:GO:0031253 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104049
CTD:11021 KO:K07876 OrthoDB:EOG4QVCD5 EMBL:BC085769 IPI:IPI00371187
RefSeq:NP_001013064.1 UniGene:Rn.18008 ProteinModelPortal:Q5U316
SMR:Q5U316 STRING:Q5U316 PhosphoSite:Q5U316 PRIDE:Q5U316
Ensembl:ENSRNOT00000030031 GeneID:288700 KEGG:rno:288700
UCSC:RGD:1306362 InParanoid:Q5U316 NextBio:628573
Genevestigator:Q5U316 GermOnline:ENSRNOG00000022014 Uniprot:Q5U316
Length = 201
Score = 288 (106.4 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 63/201 (31%), Positives = 106/201 (52%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +LQ+WD
Sbjct: 6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +L+
Sbjct: 65 AGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-----DDVCRILVG 119
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NK D P+ + +F + FETSAK+N+N+++ + + +L K
Sbjct: 120 NKNDDPERKVVETEDAY-KFAGQMGIQ-LFETSAKENVNVEEMFNCITELVLRAKKDNLA 177
Query: 636 GDSHATSEAVFSLNRNSQETK 656
V L +NS+ K
Sbjct: 178 KQQQQQQNDVVKLTKNSKRKK 198
>TAIR|locus:2057624 [details] [associations]
symbol:ArRABA1h "RAB GTPase homolog A1H" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009860
"pollen tube growth" evidence=RCA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:U78721 KO:K07976
HOGENOM:HOG000233968 EMBL:DQ446594 IPI:IPI00538868 PIR:F84750
RefSeq:NP_180943.4 UniGene:At.66305 ProteinModelPortal:Q1PEX3
SMR:Q1PEX3 PaxDb:Q1PEX3 PRIDE:Q1PEX3 EnsemblPlants:AT2G33870.1
GeneID:817957 KEGG:ath:AT2G33870 TAIR:At2g33870 InParanoid:P93020
OMA:ELRTHAD PhylomeDB:Q1PEX3 ProtClustDB:CLSN2679642
Genevestigator:Q1PEX3 Uniprot:Q1PEX3
Length = 218
Score = 288 (106.4 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 66/196 (33%), Positives = 115/196 (58%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
K D ++L+K+++ G+ G GK++++ R+ FS R+TIGV+FA + + D + I++
Sbjct: 5 KAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVD-DKIVK 63
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
Q+WD AGQER+ +T YY+ AVGA +V+DVTR TF+ V +W ++L D N +
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT---DANTV 120
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA---AKTLVQKI 626
+L+ NK D A + ++ +F + N + + ETSA + IN+++A T + ++
Sbjct: 121 -IMLVGNKADL-NHLRAISTEEVKDFAEREN-TFFMETSALEAINVENAFTEVLTQIYRV 177
Query: 627 LENDKVQANGDSHATS 642
+ + A GD T+
Sbjct: 178 VSKKALDA-GDDPTTA 192
>UNIPROTKB|E1BAI0 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045861 "negative regulation of proteolysis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0021513 "spinal cord dorsal/ventral patterning"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0045861
GO:GO:0042733 GO:GO:0008589 GeneTree:ENSGT00700000104457 CTD:51715
KO:K06234 OMA:VTEVFKY GO:GO:0021513 EMBL:DAAA02054803
EMBL:DAAA02054804 IPI:IPI00696030 RefSeq:NP_001193835.1
UniGene:Bt.62609 Ensembl:ENSBTAT00000007050 GeneID:618588
KEGG:bta:618588 NextBio:20901259 Uniprot:E1BAI0
Length = 237
Score = 271 (100.5 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 69/212 (32%), Positives = 114/212 (53%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
+ + E K++V+G GK+S+I+RY F+ Y+ TIGVDF + + + E + RL
Sbjct: 2 LEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDV-RL 60
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
LWD AGQE F +T+ YY+ A +VF T +F+A+ W++ + A+V G+ IP
Sbjct: 61 MLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEV----GD-IP 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
L+ NK D + N + + K+ ++ TS K+++N+ + K L +K L+
Sbjct: 116 TALVQNKIDLLDDSCIKNE-EAEALAKKLKLR-FYRTSVKEDLNVSEVFKYLAEKYLQKL 173
Query: 631 KVQA--NGDS-HATSE--AVFSLNRNSQETKN 657
K Q N +S H++S VFS + S +N
Sbjct: 174 KQQIAENPESMHSSSNKIGVFSTSAGSHLGQN 205
Score = 38 (18.4 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 645 VFSLNRNSQETKNGRN 660
V +L N Q TK RN
Sbjct: 214 VINLRPNRQRTKKNRN 229
>DICTYBASE|DDB_G0269236 [details] [associations]
symbol:rab7A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0032010 "phagolysosome" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0005764 "lysosome"
evidence=IDA] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0269236
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005615
GO:GO:0007264 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0015031 GO:GO:0006909 GO:GO:0005764
PROSITE:PS51419 eggNOG:COG1100 KO:K07897 OMA:SPRDPEH EMBL:U02928
RefSeq:XP_645911.1 ProteinModelPortal:P36411 SMR:P36411
STRING:P36411 PRIDE:P36411 EnsemblProtists:DDB0191507
GeneID:8616852 KEGG:ddi:DDB_G0269236 ProtClustDB:CLSZ2729277
Uniprot:P36411
Length = 203
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 59/178 (33%), Positives = 103/178 (57%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K L D + ++ +
Sbjct: 1 MATKKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVD-DRVVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A + +DV A TF+ + W+ + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
V+L NK D + + + + N +FETSAK+ IN++ A +T+ + ++
Sbjct: 120 FVVLGNKIDLENQRVVSQKRAASWCQSKGNIP-YFETSAKEAINVEQAFQTIARNAIK 176
>DICTYBASE|DDB_G0272138 [details] [associations]
symbol:rab2B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0272138 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000151_GR EMBL:AAFI02000008 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HSSP:Q15907 OMA:EEGLFFM RefSeq:XP_645208.1
ProteinModelPortal:Q559X6 SMR:Q559X6 PRIDE:Q559X6
EnsemblProtists:DDB0229402 GeneID:8618381 KEGG:ddi:DDB_G0272138
Uniprot:Q559X6
Length = 202
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 67/198 (33%), Positives = 123/198 (62%)
Query: 440 GSSKEVSPYS-KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK 498
GSS E ++ + E L+K +++G+ GK++++ ++V + F+P+ TIGV+F +
Sbjct: 5 GSSGEKPTFNDRKSTSYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSR 64
Query: 499 VLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLD 558
++ + + I +LQ+WD AGQE+F ++TR YY+ AV A IV+D+TR +F+++ W D
Sbjct: 65 SININDKQI-KLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDC- 122
Query: 559 AKVTLPDGNPIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDD 617
K + D + VL+ NK D + ++ + AK EF +++ +FETSAK +N+D+
Sbjct: 123 RKFSSCD---VTTVLIGNKADLEANRQVSTSEAK--EFAEKNGLM-FFETSAKTALNVDE 176
Query: 618 AAKTLVQKILENDKVQAN 635
A + ++IL+ K+++N
Sbjct: 177 AFEKSTEQILK--KLESN 192
>UNIPROTKB|Q5F3R8 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7
CTD:9230 KO:K07905 OMA:ERSAHDE EMBL:AADN02063526 EMBL:AJ851582
IPI:IPI00573563 RefSeq:NP_001012569.1 UniGene:Gga.1828 SMR:Q5F3R8
STRING:Q5F3R8 Ensembl:ENSGALT00000000866 GeneID:420063
KEGG:gga:420063 InParanoid:Q5F3R8 NextBio:20823028 Uniprot:Q5F3R8
Length = 218
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 64/193 (33%), Positives = 119/193 (61%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + + D +TI + Q+
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+ + T++ V +W ++L D N I +
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA---DNN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI--LEN 629
L+ NK D + + + A+ F +++N S + ETSA D+ N+++A K ++ +I + +
Sbjct: 121 LVGNKSDLRHLRAVPTDEARA--FAEKNNLS-FIETSALDSTNVEEAFKNILTEIYRIVS 177
Query: 630 DKVQANGDSHATS 642
K A+ +H S
Sbjct: 178 QKQIADRSAHDES 190
>UNIPROTKB|F1N2J9 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9913 "Bos
taurus" [GO:0045046 "protein import into peroxisome membrane"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0005778 GO:GO:0045046 GeneTree:ENSGT00700000104031
OMA:TSFFRCL IPI:IPI00693636 UniGene:Bt.38707 EMBL:DAAA02028749
PRIDE:F1N2J9 Ensembl:ENSBTAT00000014802 Uniprot:F1N2J9
Length = 207
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 65/204 (31%), Positives = 117/204 (57%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVERMILG 120
Query: 576 NKCDQ-PKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--N 629
NKCD K ++ + ID IK + ETSAK ++N+++A TL + I+ N
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIK------FLETSAKSSMNVEEAFFTLARDIMTKLN 174
Query: 630 DKVQANGDSHATSEAVFSLNRNSQ 653
K+ + S A + NR+ +
Sbjct: 175 RKMNDSNSSGAGGPVKITENRSKK 198
>UNIPROTKB|P61007 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9615
"Canis lupus familiaris" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0042995
GO:GO:0007409 PROSITE:PS51419 GO:GO:0017137 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901
EMBL:X56385 PIR:B36364 RefSeq:NP_001003152.1 UniGene:Cfa.3637
ProteinModelPortal:P61007 SMR:P61007 MINT:MINT-155827 STRING:P61007
PRIDE:P61007 Ensembl:ENSCAFT00000025007 GeneID:403773
KEGG:cfa:403773 InParanoid:P61007 OMA:SNVEQHA NextBio:20817272
Uniprot:P61007
Length = 207
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 62/207 (29%), Positives = 114/207 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASAD----VEKMILG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKCD K ++ ++ ++ + ETSAK NIN+++A TL + I +
Sbjct: 121 NKCDVNDKRQVSKERG--EKLALDYGIK-FMETSAKANINVENAFFTLARDIKAKMDKKL 177
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNC 661
G+S S + + Q+ + C
Sbjct: 178 EGNSPQGSNQGVKITPDQQKRSSFFRC 204
>UNIPROTKB|P61006 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0051223 "regulation of
protein transport" evidence=IEA] [GO:0055037 "recycling endosome"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137
"Rab GTPase binding" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0005525 "GTP binding" evidence=IDA] [GO:0019003
"GDP binding" evidence=IDA] [GO:0006904 "vesicle docking involved
in exocytosis" evidence=IDA] [GO:0031513 "nonmotile primary cilium"
evidence=IDA] [GO:0042384 "cilium assembly" evidence=IDA]
[GO:0048210 "Golgi vesicle fusion to target membrane" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0055037
GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932 GO:GO:0042384
EMBL:CH471106 GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003
GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351 GO:GO:0048210
PDB:3QBT PDBsum:3QBT HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
CTD:4218 KO:K07901 OMA:SNVEQHA EMBL:X56741 EMBL:S53268
EMBL:AF498943 EMBL:BT007184 EMBL:CR536583 EMBL:CR542274
EMBL:BC002977 IPI:IPI00028481 PIR:B49647 RefSeq:NP_005361.2
UniGene:Hs.642874 PDB:3TNF PDBsum:3TNF ProteinModelPortal:P61006
SMR:P61006 DIP:DIP-43703N IntAct:P61006 MINT:MINT-1416277
STRING:P61006 PhosphoSite:P61006 DMDM:46810392 PaxDb:P61006
PeptideAtlas:P61006 PRIDE:P61006 DNASU:4218 Ensembl:ENST00000300935
GeneID:4218 KEGG:hsa:4218 UCSC:uc002ndn.4 GeneCards:GC19P016222
HGNC:HGNC:7007 MIM:165040 neXtProt:NX_P61006 PharmGKB:PA30743
InParanoid:P61006 PhylomeDB:P61006 ChiTaRS:RAB8A GenomeRNAi:4218
NextBio:16637 Bgee:P61006 CleanEx:HS_RAB8A Genevestigator:P61006
GermOnline:ENSG00000167461 Uniprot:P61006
Length = 207
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 62/207 (29%), Positives = 114/207 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASAD----VEKMILG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKCD K ++ ++ ++ + ETSAK NIN+++A TL + I +
Sbjct: 121 NKCDVNDKRQVSKERG--EKLALDYGIK-FMETSAKANINVENAFFTLARDIKAKMDKKL 177
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNC 661
G+S S + + Q+ + C
Sbjct: 178 EGNSPQGSNQGVKITPDQQKRSSFFRC 204
>UNIPROTKB|F2Z5I8 [details] [associations]
symbol:RAB8A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0048210
"Golgi vesicle fusion to target membrane" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0031513 "nonmotile primary
cilium" evidence=IEA] [GO:0006904 "vesicle docking involved in
exocytosis" evidence=IEA] [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0055037 GO:GO:0005932 GO:GO:0042384
GO:GO:0031513 GO:GO:0006904 GO:GO:0048210
GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901 OMA:SNVEQHA
EMBL:CU856246 RefSeq:NP_001230731.1 UniGene:Ssc.24907
ProteinModelPortal:F2Z5I8 SMR:F2Z5I8 PRIDE:F2Z5I8
Ensembl:ENSSSCT00000015126 GeneID:100511006 KEGG:ssc:100511006
Uniprot:F2Z5I8
Length = 207
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 62/207 (29%), Positives = 114/207 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASAD----VEKMILG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKCD K ++ ++ ++ + ETSAK NIN+++A TL + I +
Sbjct: 121 NKCDVNDKRQVSKERG--EKLALDYGIK-FMETSAKANINVENAFFTLARDIKAKMDKKL 177
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNC 661
G+S S + + Q+ + C
Sbjct: 178 EGNSPQGSNQGVKITPDQQKRSSFFRC 204
>UNIPROTKB|Q4R5P1 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9541
"Macaca fascicularis" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137 "Rab GTPase
binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0045335 "phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0048471 GO:GO:0007264 GO:GO:0015031
GO:GO:0042995 GO:GO:0007409 PROSITE:PS51419 GO:GO:0017137
GO:GO:0019003 HOVERGEN:HBG009351 EMBL:AB169502
ProteinModelPortal:Q4R5P1 SMR:Q4R5P1 PRIDE:Q4R5P1 Uniprot:Q4R5P1
Length = 207
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 62/207 (29%), Positives = 114/207 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASAD----VEKMILG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKCD K ++ ++ ++ + ETSAK NIN+++A TL + I +
Sbjct: 121 NKCDVNDKRQVSKERG--EKLALDYGIK-FMETSAKANINVENAFFTLARDIKAKMDKKL 177
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNC 661
G+S S + + Q+ + C
Sbjct: 178 EGNSPQGSNQGVKITPDQQKRSSFFRC 204
>MGI|MGI:894284 [details] [associations]
symbol:Rab12 "RAB12, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005764
"lysosome" evidence=IDA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0030141 "secretory granule"
evidence=ISO] [GO:0044257 "cellular protein catabolic process"
evidence=IMP] [GO:0055038 "recycling endosome membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:894284 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0015031 GO:GO:0005764 GO:GO:0008333
PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
GO:GO:0044257 HOVERGEN:HBG009351 OrthoDB:EOG45757M CTD:201475
KO:K07907 ChiTaRS:RAB12 EMBL:AB232607 EMBL:M79303 EMBL:AK013690
IPI:IPI00169699 PIR:JH0643 RefSeq:NP_077768.2 UniGene:Mm.248313
ProteinModelPortal:P35283 SMR:P35283 IntAct:P35283 STRING:P35283
PhosphoSite:P35283 PaxDb:P35283 PRIDE:P35283 DNASU:19328
Ensembl:ENSMUST00000167962 GeneID:19328 KEGG:mmu:19328
GeneTree:ENSGT00700000104049 InParanoid:P35283 NextBio:296297
Bgee:P35283 CleanEx:MM_RAB12 Genevestigator:P35283
GermOnline:ENSMUSG00000023460 Uniprot:P35283
Length = 243
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 68/199 (34%), Positives = 112/199 (56%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P +F ++++IG G GKTS+++R+ F ++T+GVDF +K + + I RLQ
Sbjct: 35 PRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKI-RLQ 93
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD AGQERF ++T YY+ A G +V+D+T+ TFD + KW + +D K D
Sbjct: 94 IWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMID-KYASEDAE---L 149
Query: 572 VLLANK--CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ NK C+ +E I+ ++F ++ + E SAKDN N+D+ LV IL+
Sbjct: 150 LLVGNKLDCETDRE-ISRQQG--EKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILK- 205
Query: 630 DKVQANGDSHATSEAVFSL 648
K+ + + S ++ SL
Sbjct: 206 -KMPLDVLRNELSNSILSL 223
>TAIR|locus:2118500 [details] [associations]
symbol:RABG3A "RAB GTPase homolog G3A" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0005774
GO:GO:0007264 EMBL:CP002687 GO:GO:0015031 KO:K07976 IPI:IPI00938875
RefSeq:NP_001154217.1 UniGene:At.26414 ProteinModelPortal:F4JKR6
SMR:F4JKR6 PRIDE:F4JKR6 EnsemblPlants:AT4G09720.3 GeneID:826558
KEGG:ath:AT4G09720 OMA:NEHEQDI Uniprot:F4JKR6
Length = 217
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 75/226 (33%), Positives = 116/226 (51%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L E ++ L
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIG-EKLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKV------TLP 564
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + T+
Sbjct: 60 QIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMWTIA 119
Query: 565 DGNP-----IPCVLLANKCDQP--KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDD 617
+ +P P ++L NK D + ++ D N +FETSAKD+ N+D+
Sbjct: 120 EASPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIP-YFETSAKDDFNVDE 178
Query: 618 AAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
A T+ + L N+ Q + +AV E K G CAC
Sbjct: 179 AFLTIAKTALANEHEQ-DIYFQGIPDAV-----TENEPKGG-GCAC 217
>TAIR|locus:2085089 [details] [associations]
symbol:RABE1e "RAB GTPase homolog E1E" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0009086
"methionine biosynthetic process" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0000139
EMBL:AC015985 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
KO:K07976 HOGENOM:HOG000233968 HSSP:P07560 OMA:TSFFRCL
ProtClustDB:CLSN2685165 EMBL:BT024925 EMBL:AK229294 EMBL:AY084345
IPI:IPI00547488 RefSeq:NP_187601.1 UniGene:At.40023
ProteinModelPortal:Q9SF91 SMR:Q9SF91 STRING:Q9SF91 PaxDb:Q9SF91
PRIDE:Q9SF91 EnsemblPlants:AT3G09900.1 GeneID:820148
KEGG:ath:AT3G09900 TAIR:At3g09900 InParanoid:Q9SF91
PhylomeDB:Q9SF91 Genevestigator:Q9SF91 Uniprot:Q9SF91
Length = 218
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 68/224 (30%), Positives = 121/224 (54%)
Query: 445 VSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDH 504
V+P D ++L K+L+IG+ G GK+ ++ R+ F+ + TIG+DF ++ + D
Sbjct: 3 VAPARARSDY-DYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDG 61
Query: 505 ETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLP 564
+ I +LQ+WD AGQERF +T YY+ A+G +V+DVT ++F+ + W ++++ +
Sbjct: 62 KRI-KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHAS-- 118
Query: 565 DGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AK 620
+ + +L+ NK D + A +K E+ +FETSAK N N++ AK
Sbjct: 119 --DSVNKILVGNKADMDESKRAVPTSKGQALADEYGIK-FFETSAKTNQNVEQVFLSIAK 175
Query: 621 TLVQKILEND-KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ Q++ E+D K + G +A N+ S + N ++ C
Sbjct: 176 DIKQRLTESDTKAEPQGIKITKQDA----NKASSSSTNEKSACC 215
>UNIPROTKB|E2QWS2 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104457 CTD:51715 KO:K06234 OMA:VTEVFKY
EMBL:AAEX03008410 RefSeq:XP_538975.2 Ensembl:ENSCAFT00000003875
GeneID:481854 KEGG:cfa:481854 Uniprot:E2QWS2
Length = 237
Score = 269 (99.8 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 68/212 (32%), Positives = 113/212 (53%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
+ + E K++V+G GK+S+I+RY F+ Y+ TIGVDF + + + E + RL
Sbjct: 2 LEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDV-RL 60
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
LWD AGQE F +T+ YY+ A +VF T +F+A+ W++ + A+V G+ IP
Sbjct: 61 MLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEV----GD-IP 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
VL+ NK D + N + + K+ ++ TS K+++N+ + K L +K L+
Sbjct: 116 TVLVQNKIDLLDDSCIKNE-EAEALAKKLKLR-FYRTSVKEDLNVTEVFKYLAEKYLQKL 173
Query: 631 KVQANGDS---HATSE--AVFSLNRNSQETKN 657
K Q D H++S VF+ + S +N
Sbjct: 174 KQQIAEDPELMHSSSNKIGVFNTSTGSHLGQN 205
Score = 39 (18.8 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 645 VFSLNRNSQETKNGRN 660
V +L N Q TK RN
Sbjct: 214 VINLRPNKQRTKKNRN 229
>UNIPROTKB|Q5F470 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137 "Rab GTPase
binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0055037 GO:GO:0007409
PROSITE:PS51419 GO:GO:0005932 GO:GO:0017137 eggNOG:COG1100
GO:GO:0019003 GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351
GO:GO:0048210 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 HSSP:P55258
GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901 OMA:CDANDKR
EMBL:AJ851430 IPI:IPI00591966 RefSeq:NP_001026675.1
UniGene:Gga.16249 ProteinModelPortal:Q5F470 SMR:Q5F470 PRIDE:Q5F470
Ensembl:ENSGALT00000006368 GeneID:428352 KEGG:gga:428352
InParanoid:Q5F470 NextBio:20829370 Uniprot:Q5F470
Length = 207
Score = 286 (105.7 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 64/207 (30%), Positives = 113/207 (54%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT + R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + W ++++ + PD + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHAS-PD---VEKMILG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKCD K ++ ++ + ETSAK NINI++A TL + I +
Sbjct: 121 NKCDANDKRQVSREQG--EKLAASFGIK-FMETSAKANINIENAFFTLARDIKAKMDKKL 177
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNC 661
G+S S + + Q+ + C
Sbjct: 178 EGNSPQGSNQGVKITPDQQKKSSFFRC 204
>RGD|3527 [details] [associations]
symbol:Rab12 "RAB12, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005525 "GTP binding" evidence=TAS] [GO:0005764 "lysosome"
evidence=ISO;ISS] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=ISO;ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO;ISS] [GO:0030141 "secretory granule"
evidence=IDA] [GO:0044257 "cellular protein catabolic process"
evidence=ISO;ISS] [GO:0055038 "recycling endosome membrane"
evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:3527
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0030141 GO:GO:0005764 GO:GO:0008333
PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
GO:GO:0044257 HOVERGEN:HBG009351 CTD:201475 KO:K07907 EMBL:M83676
IPI:IPI00876621 PIR:C42148 RefSeq:NP_037149.1 UniGene:Rn.11021
ProteinModelPortal:P35284 SMR:P35284 IntAct:P35284 STRING:P35284
PRIDE:P35284 GeneID:25530 KEGG:rno:25530 NextBio:607023
Genevestigator:P35284 Uniprot:P35284
Length = 243
Score = 286 (105.7 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 64/179 (35%), Positives = 103/179 (57%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P +F ++++IG G GKTS+++R+ F ++T+GVDF +K + + I RLQ
Sbjct: 35 PRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKI-RLQ 93
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD AGQERF ++T YY+ A G +V+D+T+ TFD + KW + +D K D
Sbjct: 94 IWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMID-KYASEDAE---L 149
Query: 572 VLLANK--CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NK C+ +E I+ ++F ++ + E SAKDN N+D+ LV IL+
Sbjct: 150 LLVGNKLDCETDRE-ISRQQG--EKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILK 205
>TAIR|locus:2125384 [details] [associations]
symbol:GB2 "GTP-binding 2" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS;IDA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009507
GO:GO:0007264 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0015031
EMBL:AL031986 EMBL:AL161588 PROSITE:PS51419 eggNOG:COG1100
KO:K07976 UniGene:At.2486 UniGene:At.70211 HOGENOM:HOG000233968
HSSP:P07560 EMBL:U46925 EMBL:AY065262 EMBL:AY117348 EMBL:AY085750
IPI:IPI00520424 IPI:IPI00846466 PIR:S71585 RefSeq:NP_001078499.1
RefSeq:NP_195311.1 ProteinModelPortal:Q38922 SMR:Q38922
IntAct:Q38922 PaxDb:Q38922 PRIDE:Q38922 EnsemblPlants:AT4G35860.1
GeneID:829740 KEGG:ath:AT4G35860 TAIR:At4g35860 InParanoid:Q38922
OMA:HANPNMS PhylomeDB:Q38922 ProtClustDB:PLN03108
Genevestigator:Q38922 Uniprot:Q38922
Length = 211
Score = 286 (105.7 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 62/176 (35%), Positives = 105/176 (59%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K ++IG+ G GK+ ++ ++ + F P + TIGV+F ++++ D I +LQ+WD
Sbjct: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPI-KLQIWDT 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLL 574
AGQE F ++TR YY+ A GA +V+D+TR TF+ + W +D A+ NP + +L+
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED--AR---QHANPNMSIMLI 117
Query: 575 ANKCDQP-KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
NKCD K ++ + +F KEH + E SA+ N+++A KIL+N
Sbjct: 118 GNKCDLAHKRAVSKEEGQ--QFAKEHGLL-FLEASARTAQNVEEAFIETAAKILQN 170
>TAIR|locus:2140079 [details] [associations]
symbol:RABA4B "RAB GTPase homolog A4B" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019900 "kinase binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IDA] [GO:0031901 "early endosome membrane" evidence=IDA]
[GO:0032588 "trans-Golgi network membrane" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0031901 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032588
GO:GO:0015031 PROSITE:PS51419 EMBL:AL161596 GO:GO:0032456
eggNOG:COG1100 EMBL:AL035708 KO:K07976 HOGENOM:HOG000233968
HSSP:P07560 ProtClustDB:CLSN2685897 EMBL:U46926 EMBL:AY072448
EMBL:AY128914 EMBL:AY088624 IPI:IPI00516291 PIR:T06105
RefSeq:NP_195709.1 UniGene:At.1649 UniGene:At.48966
ProteinModelPortal:Q9SMQ6 SMR:Q9SMQ6 STRING:Q9SMQ6 PaxDb:Q9SMQ6
PRIDE:Q9SMQ6 EnsemblPlants:AT4G39990.1 GeneID:830160
KEGG:ath:AT4G39990 TAIR:At4g39990 InParanoid:Q9SMQ6 OMA:FEHIPRW
PhylomeDB:Q9SMQ6 Genevestigator:Q9SMQ6 Uniprot:Q9SMQ6
Length = 224
Score = 286 (105.7 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 66/196 (33%), Positives = 116/196 (59%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y K ++++K+++IG+ GK+ ++ R+ FS +ATIGV+F + LS + ++I
Sbjct: 7 YGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSI 66
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ AVGA +V+D+T+ TF+ + +W ++L A D N
Sbjct: 67 -KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHA---DKN 122
Query: 568 PIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
I +L+ NK D + + + AK EF ++ + ETSA + N++++ TL+ +I
Sbjct: 123 -IVIILIGNKSDLEDQRAVPTEDAK--EFAEKEGLF-FLETSALNATNVENSFNTLMTQI 178
Query: 627 LE--NDK-VQANGDSH 639
N K + + GDS+
Sbjct: 179 YNTVNKKNLASEGDSN 194
>ZFIN|ZDB-GENE-070424-36 [details] [associations]
symbol:rab8a "RAB8A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0035845 "photoreceptor cell outer segment organization"
evidence=IGI;IMP] [GO:0032402 "melanosome transport" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-070424-36 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0035845
GeneTree:ENSGT00700000104031 EMBL:CU693492 IPI:IPI00844893
ProteinModelPortal:F1QAX4 Ensembl:ENSDART00000086326 Uniprot:F1QAX4
Length = 210
Score = 286 (105.7 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 58/172 (33%), Positives = 104/172 (60%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASAD----VEKMILG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
NKCD K ++ + ++ E+ + ETSAK NIN+++A TL + I
Sbjct: 121 NKCDINEKRQVSKDRG--EKLALEYGIK-FMETSAKANINVENAFLTLARDI 169
>UNIPROTKB|F1MSJ9 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:DAAA02045445
IPI:IPI01028002 UniGene:Bt.26843 Ensembl:ENSBTAT00000029514
Uniprot:F1MSJ9
Length = 201
Score = 285 (105.4 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 62/201 (30%), Positives = 106/201 (52%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+++IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +LQ+WD
Sbjct: 6 DHLFKLVIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +L+
Sbjct: 65 AGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-----DDVCRILVG 119
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NK D P+ + +F + FETSAK+N+N+++ + + +L K
Sbjct: 120 NKNDDPERKVVETEDAY-KFAGQMGIQ-LFETSAKENVNVEEMFNCITELVLRAKKDNLA 177
Query: 636 GDSHATSEAVFSLNRNSQETK 656
V L +NS+ K
Sbjct: 178 KQQQQQQNDVVKLTKNSKRKK 198
>UNIPROTKB|Q1RMR4 [details] [associations]
symbol:RAB15 "Ras-related protein Rab-15" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 HSSP:Q15907 GeneTree:ENSGT00700000104031
EMBL:BC114760 IPI:IPI00701622 RefSeq:NP_001040003.1
UniGene:Bt.12645 ProteinModelPortal:Q1RMR4 PRIDE:Q1RMR4
Ensembl:ENSBTAT00000035769 GeneID:614507 KEGG:bta:614507 CTD:376267
InParanoid:Q1RMR4 KO:K07908 OMA:HNITETF OrthoDB:EOG4HDSVG
NextBio:20899139 Uniprot:Q1RMR4
Length = 212
Score = 285 (105.4 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 60/188 (31%), Positives = 111/188 (59%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYV-HQFFSPHYRATIGVDFALKVLSWDHETIIR 509
M + + L+++L+IG+ G GKT ++ R+ ++F S H +TIGVDF +K + D + R
Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHI-STIGVDFKMKTIEVDGIKV-R 58
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
+Q+WD AGQER+ +T+ YY+ A G F+V+D++ ++ ++KW D+D P+G +
Sbjct: 59 IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYA--PEG--V 114
Query: 570 PCVLLANKCDQP-KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NK D+ K + + + +E+ ++ETSA N+NI ++ L + +L+
Sbjct: 115 QKILIGNKADEEQKRQVGREQGQ--QLAREYGMD-FYETSACTNLNIKESFTRLTELVLQ 171
Query: 629 NDKVQANG 636
+ + G
Sbjct: 172 AHRKELEG 179
>UNIPROTKB|Q3MHP2 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9913
"Bos taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 EMBL:BC105162
IPI:IPI00718152 RefSeq:NP_001030468.1 UniGene:Bt.4347
ProteinModelPortal:Q3MHP2 SMR:Q3MHP2 STRING:Q3MHP2 PRIDE:Q3MHP2
Ensembl:ENSBTAT00000003206 GeneID:532723 KEGG:bta:532723 CTD:9230
InParanoid:Q3MHP2 KO:K07905 OMA:ERSAHDE NextBio:20875786
Uniprot:Q3MHP2
Length = 218
Score = 285 (105.4 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 64/193 (33%), Positives = 119/193 (61%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + + D +TI + Q+
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+ + T++ V +W ++L D N I +
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA---DSN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI--LEN 629
L+ NK D + + + A+ F +++N S + ETSA D+ N+++A K ++ +I + +
Sbjct: 121 LVGNKSDLRHLRAVPTDEARA--FAEKNNLS-FIETSALDSTNVEEAFKNILTEIYRIVS 177
Query: 630 DKVQANGDSHATS 642
K A+ +H S
Sbjct: 178 QKQIADRAAHDES 190
>UNIPROTKB|F1Q0H3 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 OMA:NRVGPPS EMBL:AAEX03007591
Ensembl:ENSCAFT00000005128 Uniprot:F1Q0H3
Length = 250
Score = 285 (105.4 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 66/188 (35%), Positives = 108/188 (57%)
Query: 440 GSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKV 499
G S S M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++
Sbjct: 38 GGGGGCSDMSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT 97
Query: 500 LSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDA 559
+ D +TI +LQ+WD AGQERF +T YY+ A G +V+DVT +F+ V +W Q++D
Sbjct: 98 IELDGKTI-KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID- 155
Query: 560 KVTLPDGNPIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA 618
+ + N + L+ NKCD K+ + AK EF + ETSAK+ N++ +
Sbjct: 156 RYASENVNKL---LVGNKCDLTTKKVVDYTTAK--EFADSLGIP-FLETSAKNATNVEQS 209
Query: 619 AKTLVQKI 626
T+ +I
Sbjct: 210 FMTMAAEI 217
>UNIPROTKB|J9JHN1 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 CTD:9230 KO:K07905 OMA:ERSAHDE
EMBL:AAEX03012474 EMBL:AAEX03012473 RefSeq:XP_854399.2
ProteinModelPortal:J9JHN1 Ensembl:ENSCAFT00000048184 GeneID:611619
KEGG:cfa:611619 Uniprot:J9JHN1
Length = 218
Score = 285 (105.4 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 64/193 (33%), Positives = 119/193 (61%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + + D +TI + Q+
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+ + T++ V +W ++L D N I +
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA---DSN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI--LEN 629
L+ NK D + + + A+ F +++N S + ETSA D+ N+++A K ++ +I + +
Sbjct: 121 LVGNKSDLRHLRAVPTDEARA--FAEKNNLS-FIETSALDSTNVEEAFKNILTEIYRIVS 177
Query: 630 DKVQANGDSHATS 642
K A+ +H S
Sbjct: 178 QKQIADRAAHDES 190
>UNIPROTKB|Q15907 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0032402 "melanosome transport" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0006184 "GTP catabolic
process" evidence=IDA;TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0016023
GO:GO:0055037 GO:GO:0007049 EMBL:CH471139 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:X79780 EMBL:AF498947 EMBL:AK312994 EMBL:BT019536
EMBL:BC110081 IPI:IPI00020436 PIR:JC2487 RefSeq:NP_004209.2
UniGene:Hs.626404 PDB:2F9L PDB:2F9M PDBsum:2F9L PDBsum:2F9M
ProteinModelPortal:Q15907 SMR:Q15907 IntAct:Q15907 STRING:Q15907
PhosphoSite:Q15907 DMDM:38258938 PaxDb:Q15907 PeptideAtlas:Q15907
PRIDE:Q15907 DNASU:9230 Ensembl:ENST00000328024 GeneID:9230
KEGG:hsa:9230 UCSC:uc002mju.4 GeneCards:GC19P008455 HGNC:HGNC:9761
MIM:604198 neXtProt:NX_Q15907 PharmGKB:PA34102 InParanoid:Q15907
PhylomeDB:Q15907 ChiTaRS:RAB11B EvolutionaryTrace:Q15907
GenomeRNAi:9230 NextBio:34597 Bgee:Q15907 CleanEx:HS_RAB11B
Genevestigator:Q15907 GermOnline:ENSG00000185236 Uniprot:Q15907
Length = 218
Score = 285 (105.4 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 64/193 (33%), Positives = 119/193 (61%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + + D +TI + Q+
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+ + T++ V +W ++L D N I +
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA---DSN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI--LEN 629
L+ NK D + + + A+ F +++N S + ETSA D+ N+++A K ++ +I + +
Sbjct: 121 LVGNKSDLRHLRAVPTDEARA--FAEKNNLS-FIETSALDSTNVEEAFKNILTEIYRIVS 177
Query: 630 DKVQANGDSHATS 642
K A+ +H S
Sbjct: 178 QKQIADRAAHDES 190
>UNIPROTKB|F2Z5J9 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00690000101664 CTD:9230
KO:K07905 OMA:ERSAHDE EMBL:FP090904 RefSeq:NP_001231804.1
UniGene:Ssc.5570 ProteinModelPortal:F2Z5J9 SMR:F2Z5J9 PRIDE:F2Z5J9
Ensembl:ENSSSCT00000014854 GeneID:100513782 KEGG:ssc:100513782
Uniprot:F2Z5J9
Length = 218
Score = 285 (105.4 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 64/193 (33%), Positives = 119/193 (61%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + + D +TI + Q+
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+ + T++ V +W ++L D N I +
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA---DSN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI--LEN 629
L+ NK D + + + A+ F +++N S + ETSA D+ N+++A K ++ +I + +
Sbjct: 121 LVGNKSDLRHLRAVPTDEARA--FAEKNNLS-FIETSALDSTNVEEAFKNILTEIYRIVS 177
Query: 630 DKVQANGDSHATS 642
K A+ +H S
Sbjct: 178 QKQIADRAAHDES 190
>MGI|MGI:99425 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:99425 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 GO:GO:0016023
GO:GO:0007049 PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351 GO:GO:0033572
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE ChiTaRS:RAB11B EMBL:L26528 EMBL:BC054753 EMBL:BC085270
IPI:IPI00135869 PIR:A55005 RefSeq:NP_033023.1 UniGene:Mm.387587
ProteinModelPortal:P46638 SMR:P46638 IntAct:P46638 STRING:P46638
PhosphoSite:P46638 PaxDb:P46638 PRIDE:P46638
Ensembl:ENSMUST00000057373 GeneID:19326 KEGG:mmu:19326
InParanoid:P46638 NextBio:296291 Bgee:P46638 CleanEx:MM_RAB11B
Genevestigator:P46638 GermOnline:ENSMUSG00000002290 GO:GO:2001135
Uniprot:P46638
Length = 218
Score = 285 (105.4 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 64/193 (33%), Positives = 119/193 (61%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + + D +TI + Q+
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+ + T++ V +W ++L D N I +
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA---DSN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI--LEN 629
L+ NK D + + + A+ F +++N S + ETSA D+ N+++A K ++ +I + +
Sbjct: 121 LVGNKSDLRHLRAVPTDEARA--FAEKNNLS-FIETSALDSTNVEEAFKNILTEIYRIVS 177
Query: 630 DKVQANGDSHATS 642
K A+ +H S
Sbjct: 178 QKQIADRAAHDES 190
>POMBASE|SPAPB1A10.10c [details] [associations]
symbol:ypt71 "GTPase Ypt71" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=ISO] [GO:0005525 "GTP binding" evidence=IC] [GO:0005634
"nucleus" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006896 "Golgi
to vacuole transport" evidence=ISO] [GO:0006897 "endocytosis"
evidence=ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=ISM] [GO:0061192 "negative regulation of
vacuole fusion, non-autophagic" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 PomBase:SPAPB1A10.10c GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005634 GO:GO:0005774
GO:GO:0006886 GO:GO:0007264 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003924 GO:GO:0006897 PROSITE:PS51419 GO:GO:0006896
eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968 RefSeq:NP_593524.1
ProteinModelPortal:Q9HDY0 SMR:Q9HDY0 STRING:Q9HDY0 PRIDE:Q9HDY0
EnsemblFungi:SPAPB1A10.10c.1 GeneID:2543411 KEGG:spo:SPAPB1A10.10c
OMA:CNIDEAF NextBio:20804426 GO:GO:0061192 Uniprot:Q9HDY0
Length = 208
Score = 285 (105.4 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 64/179 (35%), Positives = 107/179 (59%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
KR FL K++++G+ G GKT ++ ++V+Q FS Y+ATIG DF K + D + ++ LQLW
Sbjct: 5 KRVFL-KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVD-DKLVTLQLW 62
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A IV++V + +FD+V W+Q+ + T D P ++
Sbjct: 63 DTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQ-TSQDECAFPFII 121
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGW--FETSAKDNINIDDAAKTLVQKILEND 630
+ N+ D+ A + + ++ K + S FE SAK+N N+ D +T+ + LEN+
Sbjct: 122 VGNQIDKDASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALENE 180
>RGD|68369 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006928 "cellular component
movement" evidence=NAS] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0032402 "melanosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISO;ISS]
[GO:0055037 "recycling endosome" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:68369 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0006928 GO:GO:0016023 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:D01046 EMBL:AF286534 EMBL:BC062041 IPI:IPI00210381
RefSeq:NP_116006.1 UniGene:Rn.124832 ProteinModelPortal:O35509
SMR:O35509 IntAct:O35509 STRING:O35509 PhosphoSite:O35509
PRIDE:O35509 Ensembl:ENSRNOT00000010197 GeneID:79434 KEGG:rno:79434
UCSC:RGD:68369 InParanoid:O35509 NextBio:614803
Genevestigator:O35509 GermOnline:ENSRNOG00000007648 Uniprot:O35509
Length = 218
Score = 285 (105.4 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 64/193 (33%), Positives = 119/193 (61%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + + D +TI + Q+
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+ + T++ V +W ++L D N I +
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA---DSN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI--LEN 629
L+ NK D + + + A+ F +++N S + ETSA D+ N+++A K ++ +I + +
Sbjct: 121 LVGNKSDLRHLRAVPTDEARA--FAEKNNLS-FIETSALDSTNVEEAFKNILTEIYRIVS 177
Query: 630 DKVQANGDSHATS 642
K A+ +H S
Sbjct: 178 QKQIADRAAHDES 190
>DICTYBASE|DDB_G0269238 [details] [associations]
symbol:rab11A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0034394 "protein localization to
cell surface" evidence=IMP] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000331 "contractile vacuole" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0031164 "contractile
vacuolar membrane" evidence=IEA;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA;IDA] [GO:0007231
"osmosensory signaling pathway" evidence=IMP] [GO:0005525 "GTP
binding" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA;IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005773 "vacuole" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0269238 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0045335 GO:GO:0015031
PROSITE:PS51419 GO:GO:0007231 GO:GO:0031164 GO:GO:0034394
eggNOG:COG1100 KO:K07976 OMA:AMGTRDD EMBL:U02925 RefSeq:XP_646557.1
ProteinModelPortal:P36412 SMR:P36412 MINT:MINT-6947977
STRING:P36412 PRIDE:P36412 EnsemblProtists:DDB0191190
GeneID:8617525 KEGG:ddi:DDB_G0269238 ProtClustDB:CLSZ2431439
Uniprot:P36412
Length = 214
Score = 284 (105.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 62/175 (35%), Positives = 111/175 (63%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
++ ++LYKI++IG+ G GK++++ R+ FS ++TIGV+FA + + + +TI + Q+
Sbjct: 8 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTI-KAQV 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+ + AT+ +V +W +L D N I +
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENA---DRN-IEIM 122
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
L+ NK D + ++ + AK EF ++H + + ETSA D+ N++ A + ++ +I
Sbjct: 123 LVGNKSDLRHLREVSTDEAK--EFSEKHKLT-FIETSALDSSNVELAFQNILTQI 174
>FB|FBgn0031882 [details] [associations]
symbol:Rab30 "Rab30" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014134 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 GeneTree:ENSGT00700000104044 CTD:27314
KO:K07917 OMA:DYKFLFK HSSP:P32939 EMBL:AY071080
RefSeq:NP_001245926.1 RefSeq:NP_609094.1 RefSeq:NP_723241.1
RefSeq:NP_723242.1 UniGene:Dm.6130 SMR:Q9VM50
EnsemblMetazoa:FBtr0079426 EnsemblMetazoa:FBtr0079427
EnsemblMetazoa:FBtr0079428 EnsemblMetazoa:FBtr0309323 GeneID:33988
KEGG:dme:Dmel_CG9100 UCSC:CG9100-RA FlyBase:FBgn0031882
InParanoid:Q9VM50 OrthoDB:EOG49GHZN GenomeRNAi:33988 NextBio:786293
Uniprot:Q9VM50
Length = 223
Score = 284 (105.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 66/204 (32%), Positives = 114/204 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+FL+KI+++G G GKT +++R+ F P ATIGVDF +K + + E I +LQ+WD
Sbjct: 5 KFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKI-KLQIWDT 63
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF ++T+ YY+ A +V+D++ TFD + W +++ + + +L+
Sbjct: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYAN----SKVLKILVG 119
Query: 576 NKCDQPKEGIANNPAKI-DEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NK D+ I P +I +EF K+H+ + ETSAK+ N++ + +++ QA
Sbjct: 120 NKTDRDDREI---PTQIGEEFAKQHDMY-FLETSAKEAENVERLFYEIAAELIG----QA 171
Query: 635 NGDSHATSEAVFSLNRNSQETKNG 658
++S A + R S+ + G
Sbjct: 172 RSKDGSSSAAAAAAQRQSEGSSIG 195
>FB|FBgn0015795 [details] [associations]
symbol:Rab7 "Rab7" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0016197
"endosomal transport" evidence=IMP;TAS] [GO:0005770 "late endosome"
evidence=IDA] [GO:0008333 "endosome to lysosome transport"
evidence=IGI;IMP;TAS] [GO:0048102 "autophagic cell death"
evidence=IEP] [GO:0035071 "salivary gland cell autophagic cell
death" evidence=IEP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0006897
"endocytosis" evidence=IMP] [GO:0033227 "dsRNA transport"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISS] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IMP] [GO:0048190
"wing disc dorsal/ventral pattern formation" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0048190 GO:GO:0007264
GO:GO:0005811 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0005770 GO:GO:0044130 GO:GO:0008333 GO:GO:0033227
GO:GO:0035071 eggNOG:COG1100 KO:K07897 GeneTree:ENSGT00700000104345
OMA:SPRDPEH CTD:19349 HSSP:P32939 EMBL:AF079459 EMBL:AF263363
EMBL:AY060236 EMBL:BT124755 EMBL:AB035672 EMBL:AM294823
EMBL:AM294824 EMBL:AM294825 EMBL:AM294826 EMBL:AM294827
EMBL:AM294828 EMBL:AM294829 EMBL:AM294830 EMBL:AM294831
EMBL:AM294832 EMBL:AM294833 EMBL:FM245635 EMBL:FM245636
EMBL:FM245637 EMBL:FM245638 EMBL:FM245639 EMBL:FM245640
EMBL:FM245641 EMBL:FM245642 EMBL:FM245643 EMBL:FM245644
EMBL:FM245645 RefSeq:NP_001247276.1 RefSeq:NP_001247277.1
RefSeq:NP_524472.1 UniGene:Dm.1701 SMR:O76742 MINT:MINT-1017301
STRING:O76742 EnsemblMetazoa:FBtr0084503 EnsemblMetazoa:FBtr0308611
EnsemblMetazoa:FBtr0308612 GeneID:42841 KEGG:dme:Dmel_CG5915
UCSC:CG5915-RA FlyBase:FBgn0015795 InParanoid:O76742
OrthoDB:EOG4Q2BXM GenomeRNAi:42841 NextBio:830855 Uniprot:O76742
Length = 207
Score = 284 (105.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 62/213 (29%), Positives = 116/213 (54%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ GKTS++ +YV++ FS Y+ATIG DF K + + + ++ +
Sbjct: 1 MSGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVN-DRVVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT +F + W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D ++ A+ ++ + N ++ETSAK+ IN++ A + + + LE
Sbjct: 120 FVVLGNKVDLDNRQVSTRRAQ--QWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALE-- 175
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
++A + +L + N NC C
Sbjct: 176 -LEAEAEVINDFPDQITLGSQNNRPGNPDNCQC 207
>UNIPROTKB|E1C080 [details] [associations]
symbol:RAB8B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0045046 "protein import into peroxisome membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0005778
GO:GO:0045046 GeneTree:ENSGT00700000104031 OMA:TSFFRCL
EMBL:AADN02040439 EMBL:AADN02040440 EMBL:AADN02040441
IPI:IPI00585001 Ensembl:ENSGALT00000005515 Uniprot:E1C080
Length = 178
Score = 284 (105.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 56/172 (32%), Positives = 106/172 (61%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVERMILG 120
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD ++ + K ++ ++ + ETSAK +IN+++A TL + I+
Sbjct: 121 NKCDMNEKRQVSKE-KGEKLAIDYGIK-FLETSAKSSINVEEAFFTLARDIM 170
>UNIPROTKB|E1C105 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942
EMBL:AADN02045695 EMBL:AADN02045696 EMBL:AADN02045697
EMBL:AADN02045698 EMBL:AADN02045699 EMBL:AADN02045700
EMBL:AADN02045701 EMBL:AADN02054671 EMBL:AADN02054672
EMBL:AADN02054673 EMBL:AADN02054674 EMBL:AADN02054675
EMBL:AADN02054676 EMBL:AADN02054677 IPI:IPI00599950
Ensembl:ENSGALT00000023749 OMA:SEAMSHS Uniprot:E1C105
Length = 212
Score = 284 (105.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 62/187 (33%), Positives = 103/187 (55%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--ILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + + ++ F +FETSAKDNIN+ + LV I +
Sbjct: 135 NKCDMEDERVIFTE-RGKHLAEQLGFE-FFETSAKDNINVKQTFERLVDIICDKMSESLE 192
Query: 636 GDSHATS 642
D T+
Sbjct: 193 TDPSITA 199
>SGD|S000004252 [details] [associations]
symbol:YPT6 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0006886 "intracellular protein transport"
evidence=IGI;TAS] [GO:0016020 "membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=TAS] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IMP;TAS] [GO:0003924 "GTPase activity"
evidence=ISS;IDA;TAS] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
SGD:S000004252 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
EMBL:BK006945 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0042147
EMBL:U17244 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00600000084341 OMA:FKWIDEV OrthoDB:EOG44BFBD
EMBL:X59598 EMBL:AY557936 PIR:S51399 RefSeq:NP_013363.1
ProteinModelPortal:Q99260 SMR:Q99260 DIP:DIP-5577N IntAct:Q99260
MINT:MINT-491690 STRING:Q99260 PaxDb:Q99260 PRIDE:Q99260
EnsemblFungi:YLR262C GeneID:850966 KEGG:sce:YLR262C CYGD:YLR262c
NextBio:967454 Genevestigator:Q99260 GermOnline:YLR262C
Uniprot:Q99260
Length = 215
Score = 284 (105.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 74/197 (37%), Positives = 110/197 (55%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YKI+ +GE G GKTS+I R+++ F HY+ATIG+DF K + D +TI RLQLWD AGQ
Sbjct: 11 YKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTI-RLQLWDTAGQ 69
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF ++ Y +++ A IV+D+T+ +F+ + KW +D+ K D N I C++ NK
Sbjct: 70 ERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDV--KNERGDENVILCIV-GNKS 126
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSG---WFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
D E +E K+ G + ETS K N+ K L +KI ++ + Q
Sbjct: 127 DLSDE----RQISTEEGEKKAKLLGAKIFMETSTKAGYNV----KALFKKIAKSLPEFQN 178
Query: 635 NGDSHATSEAVFSLNRN 651
+ + SE S N+N
Sbjct: 179 SESTPLDSENANSANQN 195
>TAIR|locus:2142684 [details] [associations]
symbol:RAB8C "RAB GTPase homolog 8C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0000139 EMBL:AL162751
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233968
HSSP:P07560 KO:K07901 EMBL:AY035124 EMBL:AY056351 EMBL:AY087058
IPI:IPI00531864 IPI:IPI00656868 PIR:T48378 RefSeq:NP_001031827.1
RefSeq:NP_195972.1 UniGene:At.4875 ProteinModelPortal:Q9LZD4
SMR:Q9LZD4 STRING:Q9LZD4 PaxDb:Q9LZD4 PRIDE:Q9LZD4
EnsemblPlants:AT5G03520.1 GeneID:831817 KEGG:ath:AT5G03520
TAIR:At5g03520 InParanoid:Q9LZD4 OMA:DSFNTTF PhylomeDB:Q9LZD4
ProtClustDB:CLSN2685165 Genevestigator:Q9LZD4 Uniprot:Q9LZD4
Length = 216
Score = 284 (105.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 65/197 (32%), Positives = 112/197 (56%)
Query: 445 VSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDH 504
V+P D ++L K+L+IG+ G GK+ ++ R+ F+ + TIG+DF ++ + D
Sbjct: 3 VAPARARSDY-DYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDG 61
Query: 505 ETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLP 564
+ I +LQ+WD AGQERF +T YY+ A+G +V+DVT ++F+ + W ++++ +
Sbjct: 62 KRI-KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHAS-- 118
Query: 565 DGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AK 620
D + +L+ NK D + A AK E+ +FETSAK N+N+++ AK
Sbjct: 119 DN--VNKILVGNKADMDESKRAVPTAKGQALADEYGIK-FFETSAKTNLNVENVFMSIAK 175
Query: 621 TLVQKILEND-KVQANG 636
+ Q++ E D K + G
Sbjct: 176 DIKQRLTETDTKAEPQG 192
>TAIR|locus:2159285 [details] [associations]
symbol:RABA1f "RAB GTPase homolog A1F" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031 EMBL:AB015472
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P20339 EMBL:AK118670 EMBL:BT005238 IPI:IPI00535677
RefSeq:NP_200894.1 UniGene:At.29139 UniGene:At.50545
ProteinModelPortal:Q9FJH0 SMR:Q9FJH0 IntAct:Q9FJH0 PaxDb:Q9FJH0
PRIDE:Q9FJH0 EnsemblPlants:AT5G60860.1 GeneID:836207
KEGG:ath:AT5G60860 TAIR:At5g60860 InParanoid:Q9FJH0 OMA:IHVDDKI
PhylomeDB:Q9FJH0 ProtClustDB:CLSN2916414 Genevestigator:Q9FJH0
Uniprot:Q9FJH0
Length = 217
Score = 284 (105.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 67/205 (32%), Positives = 120/205 (58%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K+++IG+ G GK++++ R+ FS ++TIGV+FA + + D + I++ Q+
Sbjct: 8 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVD-DKIVKAQI 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+DVTR TF+ V +W ++L D N I +
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT---DAN-IVIM 122
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--N 629
+ NK D + ++ AK F + N + + ETSA +++N+++A ++ +I +
Sbjct: 123 FVGNKADLRHLRAVSTEDAKA--FAEREN-TFFMETSALESMNVENAFTEVLSQIYRVVS 179
Query: 630 DKVQANGDSHATSEAVFSLNRNSQE 654
K GD A ++N S++
Sbjct: 180 RKALDIGDDPAALPKGQTINVGSKD 204
>WB|WBGene00004266 [details] [associations]
symbol:rab-1 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0007264 GO:GO:0002119 GO:GO:0015031 GO:GO:0018996
GO:GO:0040011 GO:GO:0048477 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07874 OMA:NRVGPPS EMBL:FO080829
PIR:T33781 RefSeq:NP_503397.1 ProteinModelPortal:Q9UAQ6 SMR:Q9UAQ6
DIP:DIP-24638N IntAct:Q9UAQ6 MINT:MINT-1101433 STRING:Q9UAQ6
EnsemblMetazoa:C39F7.4.1 EnsemblMetazoa:C39F7.4.2 GeneID:178620
KEGG:cel:CELE_C39F7.4 UCSC:C39F7.4.1 CTD:178620 WormBase:C39F7.4
InParanoid:Q9UAQ6 NextBio:901876 ArrayExpress:Q9UAQ6 Uniprot:Q9UAQ6
Length = 205
Score = 284 (105.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 68/213 (31%), Positives = 118/213 (55%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI +L
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI-KL 62
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G +V+D+T TF+ V +W Q++D + + N +
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEID-RYACENVNKL- 120
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
L+ NKCD K + A+ ++ + + ETSAK + N++ A T+ +I
Sbjct: 121 --LVGNKCDLTAKRAVETQAAQ--DYAGQLGIP-FLETSAKSSTNVEQAFLTMASEIKSR 175
Query: 630 -DKVQANGDSHATSEAVFSLNRNSQETKNGRNC 661
VQ G + + ++ Q+ K+G C
Sbjct: 176 MGPVQGAGGAPGVR---ITGSQPVQDKKSGGCC 205
>ZFIN|ZDB-GENE-030616-564 [details] [associations]
symbol:rab1a "RAB1A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-030616-564 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00700000104049
CTD:5861 KO:K07874 OrthoDB:EOG48D0WM OMA:NRVGPPS EMBL:AL772154
EMBL:BC050239 EMBL:BC062857 IPI:IPI00492639 RefSeq:NP_001007162.1
UniGene:Dr.77140 SMR:Q7ZSZ0 STRING:Q7ZSZ0
Ensembl:ENSDART00000043002 GeneID:368883 KEGG:dre:368883
InParanoid:Q7ZSZ0 NextBio:20813242 Uniprot:Q7ZSZ0
Length = 201
Score = 284 (105.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 70/212 (33%), Positives = 115/212 (54%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G +V+DVT +F+ V +W Q++D + + N +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID-RYASENVNKL- 117
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
L+ NKCD K+ + AK EF + ETSAK+ N++ A T+ +I
Sbjct: 118 --LVGNKCDLTTKKVVDYTTAK--EFADSLGIP-FLETSAKNATNVEQAFMTMAAEI--- 169
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETKNGRNC 661
K G + SE + + +G C
Sbjct: 170 KKRMGPGATAGGSEKTMKIESTPVKPASGGCC 201
>ZFIN|ZDB-GENE-050522-555 [details] [associations]
symbol:rab12 "RAB12, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050522-555 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:201475 KO:K07907
GeneTree:ENSGT00700000104049 EMBL:CABZ01050277 EMBL:CABZ01050278
EMBL:CABZ01050279 EMBL:BC095608 IPI:IPI00499927
RefSeq:NP_001018466.1 UniGene:Dr.84887 SMR:Q502Q0
Ensembl:ENSDART00000127124 GeneID:553657 KEGG:dre:553657
InParanoid:Q502Q0 NextBio:20880391 Uniprot:Q502Q0
Length = 235
Score = 284 (105.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 69/201 (34%), Positives = 110/201 (54%)
Query: 450 KMPDKR-EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
K+P + ++ ++++IG G GKTS+++R+ F ++T+GVDF +K + + I
Sbjct: 26 KIPPRAADYKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKI- 84
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
RLQ+WD AGQERF ++T YY+ A G +V+D+T+ TF+ + KW + +D K D
Sbjct: 85 RLQIWDTAGQERFNSITSAYYRGAKGIVLVYDITKQETFEDLPKWMKMID-KYASEDAE- 142
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+L+ NK D + I+ A + F + + E SAKDN N+D+ LV IL
Sbjct: 143 --LLLVGNKLDCESDRAISRQQA--ERFASRISGMRFCEASAKDNFNVDEIFLKLVDDIL 198
Query: 628 ENDKVQANGDSHATSEAVFSL 648
K+ S S +V SL
Sbjct: 199 S--KMPLEVPSKELSNSVLSL 217
>UNIPROTKB|Q90965 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment
membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0016192 GO:GO:0005789 GO:GO:0015031 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0033116
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5862 KO:K07877
OrthoDB:EOG41G354 EMBL:X84220 IPI:IPI00582079 PIR:S52325
RefSeq:NP_990559.1 UniGene:Gga.16919 HSSP:P61019
ProteinModelPortal:Q90965 SMR:Q90965 PRIDE:Q90965 GeneID:396153
KEGG:gga:396153 InParanoid:Q90965 NextBio:20816209
ArrayExpress:Q90965 Uniprot:Q90965
Length = 212
Score = 283 (104.7 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 70/214 (32%), Positives = 119/214 (55%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
+L+K ++IG+ G GK+ ++ ++ + F P + TIGV+F ++++ D + I +LQ+WD A
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQI-KLQIWDTA 63
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQE F ++TR YY+ A GA +V+D+TR TF+ + W +D + N + +L+ N
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQH---SNSNMV-IMLIGN 119
Query: 577 KCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AKTLVQKILEN-- 629
K D + + + + F +EH + ETSAK N+++A AK + +KI E
Sbjct: 120 KSDLESRREVKKEEG--EAFAREHGLI-FMETSAKTASNVEEAFINTAKEIYEKIQEGVF 176
Query: 630 D-KVQANG----DSHATSEAVFSLNRNSQETKNG 658
D +ANG HA + A + N+ Q+ G
Sbjct: 177 DINNEANGIKIGPQHAATNATLAGNQGGQQAGGG 210
>UNIPROTKB|P51152 [details] [associations]
symbol:RAB12 "Ras-related protein Rab-12" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=ISS] [GO:0005764
"lysosome" evidence=ISS] [GO:0044257 "cellular protein catabolic
process" evidence=ISS] [GO:0008333 "endosome to lysosome transport"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0005764 GO:GO:0008333 PROSITE:PS51419
GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003 GO:GO:0044257
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:Z22818 PIR:S40207
UniGene:Cfa.44760 ProteinModelPortal:P51152 SMR:P51152 PRIDE:P51152
InParanoid:P51152 OrthoDB:EOG45757M Uniprot:P51152
Length = 208
Score = 283 (104.7 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 64/175 (36%), Positives = 100/175 (57%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+F ++++IG G GKTS+++R+ F ++T+GVDF +K + + I RLQ+WD
Sbjct: 4 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKI-RLQIWDT 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF ++T YY+ A G +V+D+T+ TFD + KW + +D K D +L+
Sbjct: 63 AGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMID-KYASEDAE---LLLVG 118
Query: 576 NK--CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NK C+ +E I ++F E + E SAKDN N+D+ LV IL+
Sbjct: 119 NKLDCETDRE-ITRQQG--EKFAHEITGMRFCEASAKDNFNVDEIFLKLVDDILK 170
>UNIPROTKB|Q52NJ2 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794 GO:GO:0007264
GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5861 KO:K07874
OrthoDB:EOG48D0WM EMBL:AY996813 RefSeq:NP_001026957.1
UniGene:Ssc.11024 ProteinModelPortal:Q52NJ2 SMR:Q52NJ2
GeneID:595116 KEGG:ssc:595116 Uniprot:Q52NJ2
Length = 205
Score = 283 (104.7 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 64/179 (35%), Positives = 106/179 (59%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI- 60
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A G +V+DVT +F+ V +W Q++D + + N
Sbjct: 61 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEID-RYASENVNK 119
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ L+ NKCD K+ + AK EF + ETSAK+ N++ + T+ +I
Sbjct: 120 L---LVGNKCDLTTKKVVDYTTAK--EFADSLGIP-FLETSAKNATNVEQSFMTMAAEI 172
>POMBASE|SPAC9E9.07c [details] [associations]
symbol:ypt2 "GTPase Ypt2" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005525 "GTP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006887
"exocytosis" evidence=IMP] [GO:0006893 "Golgi to plasma membrane
transport" evidence=ISO] [GO:0006906 "vesicle fusion" evidence=ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC9E9.07c GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003924 GO:GO:0006887
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0006893 GO:GO:0006906
GO:GO:0065007 HOGENOM:HOG000233968 KO:K07901 OMA:SNVEQHA
OrthoDB:EOG4X3M9K EMBL:X52469 EMBL:X52864 PIR:S12790
RefSeq:NP_594580.1 ProteinModelPortal:P17609 SMR:P17609
STRING:P17609 PRIDE:P17609 EnsemblFungi:SPAC9E9.07c.1
GeneID:2543280 KEGG:spo:SPAC9E9.07c NextBio:20804300 Uniprot:P17609
Length = 200
Score = 283 (104.7 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 63/186 (33%), Positives = 106/186 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L K+L+IG+ G GK+ ++ R+ F+P + TIG+DF ++ + D + I +LQ+WD
Sbjct: 7 DYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +++DVT +FD V W +++ + + +L+
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHAS----ENVYKILIG 121
Query: 576 NKCD---QPKEGIANNPAKIDEF-IKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
NKCD Q + A DE +K + E SAK N+N+D+A TL ++I + K
Sbjct: 122 NKCDCEDQRQVSFEQGQALADELGVK------FLEASAKTNVNVDEAFFTLAREI-KKQK 174
Query: 632 VQANGD 637
+ A +
Sbjct: 175 IDAENE 180
>TAIR|locus:2124593 [details] [associations]
symbol:RABA1e "RAB GTPase homolog A1E" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0015031
PROSITE:PS51419 EMBL:AL161548 eggNOG:COG1100 EMBL:AL021710
KO:K07976 HOGENOM:HOG000233968 EMBL:BT010933 EMBL:BT011645
IPI:IPI00520128 PIR:T04539 RefSeq:NP_193578.1 UniGene:At.27918
HSSP:P35278 ProteinModelPortal:O49513 SMR:O49513 PaxDb:O49513
PRIDE:O49513 EnsemblPlants:AT4G18430.1 GeneID:827574
KEGG:ath:AT4G18430 TAIR:At4g18430 InParanoid:O49513 OMA:AHEDSPG
PhylomeDB:O49513 ProtClustDB:CLSN2915845 Genevestigator:O49513
Uniprot:O49513
Length = 217
Score = 283 (104.7 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 65/189 (34%), Positives = 108/189 (57%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D ++L+K+++IG+ G GK++++ R+ FS ++TIGV+FA + + D E II+ QL
Sbjct: 8 DDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVD-EKIIKAQL 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+TR TF+ V +W ++L D N + +
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHT---DANVV-IM 122
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA---AKTLVQKILE 628
L+ NK D + + A+ F + N + ETSA D N++ A T + +++
Sbjct: 123 LVGNKADLRHLRAVPTEEAR--SFSERENMF-FMETSALDATNVEQAFTHVLTQIYRVMS 179
Query: 629 NDKVQANGD 637
+ GD
Sbjct: 180 RKALDGTGD 188
>TAIR|locus:2152753 [details] [associations]
symbol:RABA4C "RAB GTPase homolog A4C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P20339 EMBL:AF218121 EMBL:AB024025 EMBL:BT024842
IPI:IPI00524205 RefSeq:NP_199607.1 UniGene:At.49142
ProteinModelPortal:Q9FE79 SMR:Q9FE79 STRING:Q9FE79 PaxDb:Q9FE79
PRIDE:Q9FE79 EnsemblPlants:AT5G47960.1 GeneID:834847
KEGG:ath:AT5G47960 TAIR:At5g47960 InParanoid:Q9FE79 OMA:QSFDHVA
PhylomeDB:Q9FE79 ProtClustDB:CLSN2916334 Genevestigator:Q9FE79
Uniprot:Q9FE79
Length = 223
Score = 283 (104.7 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 71/223 (31%), Positives = 120/223 (53%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S K ++++K+++IG+ GK+ ++ R+ FS +ATIGV+F + L D +TI
Sbjct: 6 SNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTI- 64
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+ Q+WD AGQER+ +T YY+ AVGA +V+D+T+ +FD V +W ++L D N
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHA---DKN- 120
Query: 569 IPCVLLANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI- 626
I +L+ NK D + AK EF + N + ETSA D+ N++ + T++ +I
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAK--EFAQRENLF-FMETSALDSNNVEPSFLTVLTEIY 177
Query: 627 --------LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNC 661
+ N++ ++ GDS + E+K G+ C
Sbjct: 178 RIVSKKNLVANEEGESGGDSSLLQGTKIVVAGEETESK-GKGC 219
>ZFIN|ZDB-GENE-040625-133 [details] [associations]
symbol:rab1bb "RAB1B, member RAS oncogene family b"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040625-133 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM EMBL:CR450793
EMBL:BC097013 IPI:IPI00492873 RefSeq:NP_001002129.2
UniGene:Dr.79474 SMR:Q4V984 STRING:Q4V984
Ensembl:ENSDART00000078980 GeneID:415219 KEGG:dre:415219 CTD:415219
InParanoid:Q4V984 OMA:MAMATEI NextBio:20818886 Uniprot:Q4V984
Length = 201
Score = 283 (104.7 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 65/189 (34%), Positives = 112/189 (59%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ G GK+ I+ R+ ++ + +TIGVDF ++ + D +TI +L
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G +V+DVT +++ V +W +++D + + N +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEID-RYASENVNKL- 117
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
L+ NKCD K+ + AK EF + ETSAK+ N++ A T+ ++I +
Sbjct: 118 --LVGNKCDLTTKKVVDYTTAK--EFADSLGIP-FLETSAKNATNVEQAFMTMAEEIKKR 172
Query: 630 DKVQANGDS 638
+ A+G S
Sbjct: 173 MRPGASGGS 181
>ZFIN|ZDB-GENE-070620-16 [details] [associations]
symbol:rab8b "RAB8B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-070620-16 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
GeneTree:ENSGT00700000104031 CTD:51762 KO:K07902 EMBL:CR450827
EMBL:BC142846 IPI:IPI00854251 RefSeq:NP_001092729.1
UniGene:Dr.151937 SMR:A5PLC7 Ensembl:ENSDART00000099327
GeneID:100093706 KEGG:dre:100093706 OMA:RSRGDYD NextBio:20788636
Uniprot:A5PLC7
Length = 209
Score = 283 (104.7 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 63/189 (33%), Positives = 110/189 (58%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVERMILG 120
Query: 576 NKCDQ-PKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--N 629
NKCD K ++ + ID IK + ETSAK + N+++A TL + I+ N
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIK------FLETSAKSSTNVEEAFVTLARDIMTRLN 174
Query: 630 DKVQANGDS 638
K+ N S
Sbjct: 175 RKMNENNPS 183
>DICTYBASE|DDB_G0280043 [details] [associations]
symbol:rab8A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0033298 "contractile vacuole
organization" evidence=IGI] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0000331 "contractile vacuole"
evidence=IDA] [GO:0050708 "regulation of protein secretion"
evidence=IMP] [GO:0031157 "regulation of aggregate size involved in
sorocarp development" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=IMP] [GO:0016339 "calcium-dependent
cell-cell adhesion" evidence=IMP] [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0280043 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000152_GR GO:GO:0030036 GO:GO:0015031
EMBL:AAFI02000035 GO:GO:0000331 PROSITE:PS51419 GO:GO:0016339
GO:GO:0050708 GO:GO:0031157 eggNOG:COG1100 GO:GO:0033298 KO:K07976
EMBL:M34457 PIR:A34716 RefSeq:XP_641380.1 ProteinModelPortal:P20790
SMR:P20790 MINT:MINT-6947856 STRING:P20790 PRIDE:P20790
EnsemblProtists:DDB0214885 GeneID:8622514 KEGG:ddi:DDB_G0280043
OMA:TSFFRCL ProtClustDB:CLSZ2430646 Uniprot:P20790
Length = 208
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 57/181 (31%), Positives = 108/181 (59%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
SP + ++L K+L+IG+ G GK+ ++ R+ F+P + TIG+DF ++ + + +
Sbjct: 3 SPATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGK 62
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
I +LQ+WD AGQERF +T YY+ A+G +V+DVT +F + W ++++ T
Sbjct: 63 RI-KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHAT--- 118
Query: 566 GNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
+ + +L+ NKCD ++ + ++ ++ E+ + ETSAK++IN+++A +L +
Sbjct: 119 -DSVNKMLIGNKCDMAEKKVVDS-SRGKSLADEYGIK-FLETSAKNSINVEEAFISLAKD 175
Query: 626 I 626
I
Sbjct: 176 I 176
>FB|FBgn0051118 [details] [associations]
symbol:RabX4 "RabX4" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0007264 GO:GO:0015031
KO:K07976 GeneTree:ENSGT00700000104031 HSSP:P32939
RefSeq:NP_733043.1 ProteinModelPortal:Q9VC31 SMR:Q9VC31
EnsemblMetazoa:FBtr0084736 GeneID:42960 KEGG:dme:Dmel_CG31118
UCSC:CG31118-RA CTD:42960 FlyBase:FBgn0051118 InParanoid:Q9VC31
OMA:CKSNINI OrthoDB:EOG4S7H66 PhylomeDB:Q9VC31 GenomeRNAi:42960
NextBio:831533 ArrayExpress:Q9VC31 Bgee:Q9VC31 Uniprot:Q9VC31
Length = 213
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 66/187 (35%), Positives = 106/187 (56%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YK+LV+G+ GKT I+ RY + + Y +TIG+DF K+++ D I +LQ+WD AGQ
Sbjct: 9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPI-KLQIWDTAGQ 67
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF +T YY+ A+G +++DVT +++ + W +++ + PD + VL NKC
Sbjct: 68 ERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENAS-PD---VVKVLAGNKC 123
Query: 579 D-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGD 637
+ + + + E I E+ +FE S K NINI+DA +L +KI E + GD
Sbjct: 124 ECSATQRMVDKER--GEKIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQR--ERRGD 179
Query: 638 SHATSEA 644
+ E+
Sbjct: 180 NFDNDES 186
>GENEDB_PFALCIPARUM|PF13_0119 [details] [associations]
symbol:Rab11a "Rab11a, GTPase" species:5833
"Plasmodium falciparum" [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844509 GenomeReviews:AL844509_GR KO:K07976
HOGENOM:HOG000233968 OMA:AHEDSPG RefSeq:XP_001349945.1 PDB:3BFK
PDBsum:3BFK ProteinModelPortal:Q76NM4 SMR:Q76NM4
EnsemblProtists:PF13_0119:mRNA GeneID:814090 KEGG:pfa:PF13_0119
EuPathDB:PlasmoDB:PF3D7_1320600 ProtClustDB:CLSZ2433377
EvolutionaryTrace:Q76NM4 Uniprot:Q76NM4
Length = 216
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 69/209 (33%), Positives = 117/209 (55%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D ++L+KI++IG+ G GK++++ R+ F+ ++TIGV+FA K + + II+ Q+
Sbjct: 6 DYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQI 65
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+T+ +F+ + KW ++L D N I +
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNA---DSN-IVIL 121
Query: 573 LLANKCDQPKEGIAN-NPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE-ND 630
L+ NK D + N N A ++ K+ + + ETSA + N++ A L+ +I
Sbjct: 122 LVGNKSDLKHLRVINDNDAT--QYAKKEKLA-FIETSALEATNVELAFHQLLNEIYNVRQ 178
Query: 631 KVQA--NGDSHATSEAVFSLNRNSQETKN 657
K QA N D+ + +N + KN
Sbjct: 179 KKQATKNDDNLSIQPRGKKINVDDDNDKN 207
>UNIPROTKB|F1NNL7 [details] [associations]
symbol:RAB1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104049 CTD:5861 KO:K07874
OMA:NRVGPPS EMBL:AADN02036218 EMBL:AADN02036219 IPI:IPI00684373
RefSeq:NP_001257591.1 UniGene:Gga.34237 UniGene:Gga.37826
Ensembl:ENSGALT00000031973 GeneID:421273 KEGG:gga:421273
NextBio:20824063 ArrayExpress:F1NNL7 Uniprot:F1NNL7
Length = 205
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 64/179 (35%), Positives = 106/179 (59%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI- 60
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A G +V+DVT +F+ V +W Q++D + + N
Sbjct: 61 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID-RYASENVNK 119
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ L+ NKCD K+ + AK EF + ETSAK+ N++ + T+ +I
Sbjct: 120 L---LVGNKCDLTTKKVVDYTTAK--EFADSLGIP-FLETSAKNATNVEQSFMTMAAEI 172
>UNIPROTKB|A1L528 [details] [associations]
symbol:RAB1A "RAB1A, member RAS oncogene family"
species:9913 "Bos taurus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OMA:NRVGPPS EMBL:DAAA02031452
EMBL:BT029815 IPI:IPI00829520 UniGene:Bt.49381 SMR:A1L528
Ensembl:ENSBTAT00000022227 InParanoid:A1L528 Uniprot:A1L528
Length = 205
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 64/179 (35%), Positives = 106/179 (59%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI- 60
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A G +V+DVT +F+ V +W Q++D + + N
Sbjct: 61 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID-RYASENVNK 119
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ L+ NKCD K+ + AK EF + ETSAK+ N++ + T+ +I
Sbjct: 120 L---LVGNKCDLTTKKVVDYTTAK--EFADSLGIP-FLETSAKNATNVEQSFMTMAAEI 172
>UNIPROTKB|Q2HJI8 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0019003
"GDP binding" evidence=ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
HSSP:P55258 EMBL:BC105330 IPI:IPI00693636 RefSeq:NP_001069785.1
UniGene:Bt.38707 ProteinModelPortal:Q2HJI8 SMR:Q2HJI8 PRIDE:Q2HJI8
GeneID:614242 KEGG:bta:614242 CTD:51762 InParanoid:Q2HJI8 KO:K07902
NextBio:20899012 Uniprot:Q2HJI8
Length = 207
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 64/204 (31%), Positives = 116/204 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVERMILG 120
Query: 576 NKCDQ-PKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--N 629
NKCD K ++ + ID IK + E SAK ++N+++A TL + I+ N
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIK------FLEASAKSSMNVEEAFFTLARDIMTKLN 174
Query: 630 DKVQANGDSHATSEAVFSLNRNSQ 653
K+ + S A + NR+ +
Sbjct: 175 RKMNDSNSSGAGGPVKITENRSKK 198
>UNIPROTKB|G1K288 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101805 OMA:KIGPQHS EMBL:AAEX03015816
Ensembl:ENSCAFT00000011465 Uniprot:G1K288
Length = 232
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 70/214 (32%), Positives = 119/214 (55%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
+L+K ++IG+ G GK+ ++ ++ + F P + TIGV+F ++++ D + I +LQ+WD A
Sbjct: 25 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQI-KLQIWDTA 83
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQE F ++TR YY+ A GA +V+D+TR TF+ + W +D + N + +L+ N
Sbjct: 84 GQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQH---SNSNMV-IMLIGN 139
Query: 577 KCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AKTLVQKILEN-- 629
K D + + + + F +EH + ETSAK N+++A AK + +KI E
Sbjct: 140 KSDLESRREVKKEEG--EAFAREHGLI-FMETSAKTASNVEEAFINTAKEIYEKIQEGVF 196
Query: 630 D-KVQANG----DSHATSEAVFSLNRNSQETKNG 658
D +ANG HA + A + N+ Q+ G
Sbjct: 197 DINNEANGIKIGPQHAATNATHAGNQGGQQAGGG 230
>UNIPROTKB|P61105 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0042470 "melanosome" evidence=IEA]
[GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment
membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0000139 GO:GO:0016192 GO:GO:0005789
GO:GO:0015031 GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0033116 HOVERGEN:HBG009351 HOGENOM:HOG000233968
EMBL:M35521 PIR:A39648 RefSeq:NP_001003318.1 UniGene:Cfa.44676
ProteinModelPortal:P61105 SMR:P61105 STRING:P61105 PRIDE:P61105
GeneID:404009 KEGG:cfa:404009 CTD:5862 InParanoid:P61105 KO:K07877
OrthoDB:EOG41G354 BindingDB:P61105 NextBio:20817496 Uniprot:P61105
Length = 212
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 70/214 (32%), Positives = 119/214 (55%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
+L+K ++IG+ G GK+ ++ ++ + F P + TIGV+F ++++ D + I +LQ+WD A
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQI-KLQIWDTA 63
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQE F ++TR YY+ A GA +V+D+TR TF+ + W +D + N + +L+ N
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQH---SNSNMV-IMLIGN 119
Query: 577 KCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AKTLVQKILEN-- 629
K D + + + + F +EH + ETSAK N+++A AK + +KI E
Sbjct: 120 KSDLESRREVKKEEG--EAFAREHGLI-FMETSAKTASNVEEAFINTAKEIYEKIQEGVF 176
Query: 630 D-KVQANG----DSHATSEAVFSLNRNSQETKNG 658
D +ANG HA + A + N+ Q+ G
Sbjct: 177 DINNEANGIKIGPQHAATNATHAGNQGGQQAGGG 210
>UNIPROTKB|P62822 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9615
"Canis lupus familiaris" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 EMBL:X56384 RefSeq:NP_001003153.1
UniGene:Cfa.26557 ProteinModelPortal:P62822 SMR:P62822
IntAct:P62822 PRIDE:P62822 Ensembl:ENSCAFT00000049414 GeneID:403774
KEGG:cfa:403774 CTD:5861 InParanoid:P62822 KO:K07874
OrthoDB:EOG48D0WM NextBio:20817273 Uniprot:P62822
Length = 205
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 64/179 (35%), Positives = 106/179 (59%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI- 60
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A G +V+DVT +F+ V +W Q++D + + N
Sbjct: 61 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID-RYASENVNK 119
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ L+ NKCD K+ + AK EF + ETSAK+ N++ + T+ +I
Sbjct: 120 L---LVGNKCDLTTKKVVDYTTAK--EFADSLGIP-FLETSAKNATNVEQSFMTMAAEI 172
>UNIPROTKB|P61019 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment
membrane" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042470 Reactome:REACT_115566
GO:GO:0007264 GO:GO:0000139 Reactome:REACT_21300 GO:GO:0005789
GO:GO:0015031 GO:GO:0043025 GO:GO:0003924 PROSITE:PS51419
GO:GO:0006888 eggNOG:COG1100 GO:GO:0019003 EMBL:CH471068
GO:GO:0033116 HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5862
KO:K07877 OrthoDB:EOG41G354 OMA:KIGPQHS EMBL:X12953 EMBL:M28213
EMBL:AF498930 EMBL:BT019695 EMBL:AK297576 EMBL:AK312344
EMBL:AC068389 EMBL:AC079065 EMBL:BC008929 IPI:IPI00031169
IPI:IPI00794561 PIR:B34323 RefSeq:NP_001229573.1 RefSeq:NP_002856.1
UniGene:Hs.369017 PDB:1Z0A PDBsum:1Z0A ProteinModelPortal:P61019
SMR:P61019 DIP:DIP-316N IntAct:P61019 MINT:MINT-5001132
STRING:P61019 PhosphoSite:P61019 DMDM:46577636 PaxDb:P61019
PRIDE:P61019 DNASU:5862 Ensembl:ENST00000262646
Ensembl:ENST00000531289 GeneID:5862 KEGG:hsa:5862 UCSC:uc003xud.2
GeneCards:GC08P061429 HGNC:HGNC:9763 HPA:CAB018781 MIM:179509
neXtProt:NX_P61019 PharmGKB:PA162400618 PhylomeDB:P61019
BindingDB:P61019 ChiTaRS:RAB2A EvolutionaryTrace:P61019
GenomeRNAi:5862 NextBio:22766 ArrayExpress:P61019 Bgee:P61019
CleanEx:HS_RAB2A Genevestigator:P61019 GermOnline:ENSG00000104388
Uniprot:P61019
Length = 212
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 70/214 (32%), Positives = 119/214 (55%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
+L+K ++IG+ G GK+ ++ ++ + F P + TIGV+F ++++ D + I +LQ+WD A
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQI-KLQIWDTA 63
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQE F ++TR YY+ A GA +V+D+TR TF+ + W +D + N + +L+ N
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQH---SNSNMV-IMLIGN 119
Query: 577 KCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AKTLVQKILEN-- 629
K D + + + + F +EH + ETSAK N+++A AK + +KI E
Sbjct: 120 KSDLESRREVKKEEG--EAFAREHGLI-FMETSAKTASNVEEAFINTAKEIYEKIQEGVF 176
Query: 630 D-KVQANG----DSHATSEAVFSLNRNSQETKNG 658
D +ANG HA + A + N+ Q+ G
Sbjct: 177 DINNEANGIKIGPQHAATNATHAGNQGGQQAGGG 210
>UNIPROTKB|P62820 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794
Reactome:REACT_115566 GO:GO:0007264 EMBL:CH471053
Reactome:REACT_21300 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 PDB:4FME PDBsum:4FME
HOVERGEN:HBG009351 PDB:2WWX PDB:3L0I PDBsum:2WWX PDBsum:3L0I
HOGENOM:HOG000233968 CTD:5861 KO:K07874 OrthoDB:EOG48D0WM
OMA:NRVGPPS EMBL:M28209 EMBL:AL050268 EMBL:BX571747 EMBL:AK055927
EMBL:AF498929 EMBL:CR533479 EMBL:BC000905 IPI:IPI00005719
IPI:IPI00185217 IPI:IPI00334174 PIR:A34323 RefSeq:NP_004152.1
RefSeq:NP_056358.1 UniGene:Hs.310645 PDB:2FOL PDB:3SFV PDB:3TKL
PDB:4FMB PDB:4FMC PDB:4FMD PDBsum:2FOL PDBsum:3SFV PDBsum:3TKL
PDBsum:4FMB PDBsum:4FMC PDBsum:4FMD ProteinModelPortal:P62820
SMR:P62820 DIP:DIP-1063N IntAct:P62820 MINT:MINT-1343792
STRING:P62820 PhosphoSite:P62820 DMDM:51338603 PaxDb:P62820
PRIDE:P62820 DNASU:5861 Ensembl:ENST00000398529
Ensembl:ENST00000409784 Ensembl:ENST00000409892 GeneID:5861
KEGG:hsa:5861 UCSC:uc002sdm.3 UCSC:uc002sdn.3 UCSC:uc002sdo.3
GeneCards:GC02M065297 HGNC:HGNC:9758 HPA:CAB005331 MIM:179508
neXtProt:NX_P62820 PharmGKB:PA34107 ChiTaRS:RAB1A
EvolutionaryTrace:P62820 GenomeRNAi:5861 NextBio:22762
ArrayExpress:P62820 Bgee:P62820 CleanEx:HS_RAB1A
Genevestigator:P62820 GermOnline:ENSG00000138069 Uniprot:P62820
Length = 205
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 64/179 (35%), Positives = 106/179 (59%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI- 60
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A G +V+DVT +F+ V +W Q++D + + N
Sbjct: 61 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID-RYASENVNK 119
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ L+ NKCD K+ + AK EF + ETSAK+ N++ + T+ +I
Sbjct: 120 L---LVGNKCDLTTKKVVDYTTAK--EFADSLGIP-FLETSAKNATNVEQSFMTMAAEI 172
>UNIPROTKB|Q92930 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0030911 "TPR domain
binding" evidence=IEA] [GO:0031346 "positive regulation of cell
projection organization" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0051286 "cell tip"
evidence=IEA] [GO:0051461 "positive regulation of corticotropin
secretion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0015031 "protein transport" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0034332 "adherens junction
organization" evidence=ISS] [GO:0005102 "receptor binding"
evidence=IPI] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0045046 "protein import into peroxisome membrane" evidence=IDA]
[GO:0005778 "peroxisomal membrane" evidence=IDA] [GO:0019003 "GDP
binding" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=NAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0048471 GO:GO:0007264 GO:GO:0051286 GO:GO:0003924
GO:GO:0031410 GO:GO:0005778 GO:GO:0034332 PROSITE:PS51419
GO:GO:0051461 EMBL:AC016207 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0031346 GO:GO:0045046 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 OMA:TSFFRCL CTD:51762 KO:K07902 EMBL:AB038995
EMBL:AK001111 EMBL:AL833365 EMBL:BC020654 EMBL:U66624
IPI:IPI00024282 RefSeq:NP_057614.1 UniGene:Hs.389733
ProteinModelPortal:Q92930 SMR:Q92930 IntAct:Q92930 STRING:Q92930
PhosphoSite:Q92930 DMDM:13638434 PaxDb:Q92930 PeptideAtlas:Q92930
PRIDE:Q92930 DNASU:51762 Ensembl:ENST00000321437 GeneID:51762
KEGG:hsa:51762 UCSC:uc002alz.3 GeneCards:GC15P063481
HGNC:HGNC:30273 MIM:613532 neXtProt:NX_Q92930 PharmGKB:PA134944620
InParanoid:Q92930 PhylomeDB:Q92930 ChiTaRS:RAB8B GenomeRNAi:51762
NextBio:55874 ArrayExpress:Q92930 Bgee:Q92930 CleanEx:HS_RAB8B
Genevestigator:Q92930 GermOnline:ENSG00000166128 Uniprot:Q92930
Length = 207
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 64/204 (31%), Positives = 116/204 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVERMILG 120
Query: 576 NKCDQ-PKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--N 629
NKCD K ++ + ID IK + ETSAK + N+++A TL + I+ N
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIK------FLETSAKSSANVEEAFFTLARDIMTKLN 174
Query: 630 DKVQANGDSHATSEAVFSLNRNSQ 653
K+ + + A + NR+ +
Sbjct: 175 RKMNDSNSAGAGGPVKITENRSKK 198
>UNIPROTKB|Q4R4X6 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9541
"Macaca fascicularis" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0006184 "GTP catabolic
process" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042470 GO:GO:0007264 GO:GO:0000139
GO:GO:0016192 GO:GO:0005789 GO:GO:0015031 GO:GO:0003924
PROSITE:PS51419 GO:GO:0019003 GO:GO:0033116 HOVERGEN:HBG009351
HSSP:P61019 EMBL:AB169319 EMBL:AB169768 ProteinModelPortal:Q4R4X6
SMR:Q4R4X6 PRIDE:Q4R4X6 BindingDB:Q4R4X6 Uniprot:Q4R4X6
Length = 212
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 70/214 (32%), Positives = 119/214 (55%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
+L+K ++IG+ G GK+ ++ ++ + F P + TIGV+F ++++ D + I +LQ+WD A
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQI-KLQIWDTA 63
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQE F ++TR YY+ A GA +V+D+TR TF+ + W +D + N + +L+ N
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQH---SNSNMV-IMLIGN 119
Query: 577 KCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AKTLVQKILEN-- 629
K D + + + + F +EH + ETSAK N+++A AK + +KI E
Sbjct: 120 KSDLESRREVKKEEG--EAFAREHGLI-FMETSAKTASNVEEAFINTAKEIYEKIQEGVF 176
Query: 630 D-KVQANG----DSHATSEAVFSLNRNSQETKNG 658
D +ANG HA + A + N+ Q+ G
Sbjct: 177 DINNEANGIKIGPQHAATNATHAGNQGGQQAGGG 210
>UNIPROTKB|Q5R6B6 [details] [associations]
symbol:RAB2A "Ras-related protein Rab-2A" species:9601
"Pongo abelii" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0019003 "GDP binding"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470 GO:GO:0007264
GO:GO:0000139 GO:GO:0016192 GO:GO:0005789 GO:GO:0015031
GO:GO:0003924 PROSITE:PS51419 GO:GO:0019003 GO:GO:0033116
HOVERGEN:HBG009351 GeneTree:ENSGT00690000101805 CTD:5862 KO:K07877
HSSP:P61019 OMA:KIGPQHS EMBL:CR860575 RefSeq:NP_001126581.1
UniGene:Pab.18716 ProteinModelPortal:Q5R6B6 SMR:Q5R6B6 PRIDE:Q5R6B6
Ensembl:ENSPPYT00000021711 GeneID:100173573 KEGG:pon:100173573
InParanoid:Q5R6B6 BindingDB:Q5R6B6 Uniprot:Q5R6B6
Length = 212
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 70/214 (32%), Positives = 119/214 (55%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
+L+K ++IG+ G GK+ ++ ++ + F P + TIGV+F ++++ D + I +LQ+WD A
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQI-KLQIWDTA 63
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQE F ++TR YY+ A GA +V+D+TR TF+ + W +D + N + +L+ N
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQH---SNSNMV-IMLIGN 119
Query: 577 KCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AKTLVQKILEN-- 629
K D + + + + F +EH + ETSAK N+++A AK + +KI E
Sbjct: 120 KSDLESRREVKKEEG--EAFAREHGLI-FMETSAKTASNVEEAFINTAKEIYEKIQEGVF 176
Query: 630 D-KVQANG----DSHATSEAVFSLNRNSQETKNG 658
D +ANG HA + A + N+ Q+ G
Sbjct: 177 DINNEANGIKIGPQHAATNATHAGNQGGQQAGGG 210
>UNIPROTKB|Q5REC9 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS] [GO:0034332
"adherens junction organization" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0034332 PROSITE:PS51419
GO:GO:0019003 HOVERGEN:HBG009351 OrthoDB:EOG4K3KX6 HSSP:P55258
GeneTree:ENSGT00700000104031 OMA:TSFFRCL CTD:51762 KO:K07902
EMBL:CR857602 RefSeq:NP_001124875.1 UniGene:Pab.18127
ProteinModelPortal:Q5REC9 SMR:Q5REC9 PRIDE:Q5REC9
Ensembl:ENSPPYT00000007720 Ensembl:ENSPPYT00000033546
GeneID:100171739 KEGG:pon:100171739 InParanoid:Q5REC9
Uniprot:Q5REC9
Length = 207
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 64/204 (31%), Positives = 116/204 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVERMILG 120
Query: 576 NKCDQ-PKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--N 629
NKCD K ++ + ID IK + ETSAK + N+++A TL + I+ N
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIK------FLETSAKSSTNVEEAFFTLARDIMTKLN 174
Query: 630 DKVQANGDSHATSEAVFSLNRNSQ 653
K+ + + A + NR+ +
Sbjct: 175 RKMNDSNSAGAGGPVKITENRSKK 198
>UNIPROTKB|Q76NM4 [details] [associations]
symbol:Rab11a "Rab11a, GTPase" species:36329 "Plasmodium
falciparum 3D7" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844509 GenomeReviews:AL844509_GR KO:K07976
HOGENOM:HOG000233968 OMA:AHEDSPG RefSeq:XP_001349945.1 PDB:3BFK
PDBsum:3BFK ProteinModelPortal:Q76NM4 SMR:Q76NM4
EnsemblProtists:PF13_0119:mRNA GeneID:814090 KEGG:pfa:PF13_0119
EuPathDB:PlasmoDB:PF3D7_1320600 ProtClustDB:CLSZ2433377
EvolutionaryTrace:Q76NM4 Uniprot:Q76NM4
Length = 216
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 69/209 (33%), Positives = 117/209 (55%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D ++L+KI++IG+ G GK++++ R+ F+ ++TIGV+FA K + + II+ Q+
Sbjct: 6 DYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQI 65
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+T+ +F+ + KW ++L D N I +
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNA---DSN-IVIL 121
Query: 573 LLANKCDQPKEGIAN-NPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE-ND 630
L+ NK D + N N A ++ K+ + + ETSA + N++ A L+ +I
Sbjct: 122 LVGNKSDLKHLRVINDNDAT--QYAKKEKLA-FIETSALEATNVELAFHQLLNEIYNVRQ 178
Query: 631 KVQA--NGDSHATSEAVFSLNRNSQETKN 657
K QA N D+ + +N + KN
Sbjct: 179 KKQATKNDDNLSIQPRGKKINVDDDNDKN 207
>MGI|MGI:97842 [details] [associations]
symbol:Rab1 "RAB1, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000139 "Golgi membrane" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:97842
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794
GO:GO:0006886 GO:GO:0007264 PROSITE:PS51419 GO:GO:0006888
eggNOG:COG1100 HOVERGEN:HBG009351 KO:K07874 OMA:NRVGPPS EMBL:Y00094
EMBL:X15744 EMBL:X15745 EMBL:X15746 EMBL:X15747 EMBL:AF226873
EMBL:AK034408 EMBL:AK159425 EMBL:AK166249 EMBL:AK167150
EMBL:BC002077 IPI:IPI00114560 PIR:S05551 RefSeq:NP_033022.1
UniGene:Mm.271944 ProteinModelPortal:P62821 SMR:P62821
IntAct:P62821 STRING:P62821 PhosphoSite:P62821 PaxDb:P62821
PRIDE:P62821 Ensembl:ENSMUST00000163483 GeneID:19324 KEGG:mmu:19324
CTD:19324 InParanoid:P62821 NextBio:296283 Bgee:P62821
CleanEx:MM_RAB1 Genevestigator:P62821 GermOnline:ENSMUSG00000020149
Uniprot:P62821
Length = 205
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 64/179 (35%), Positives = 106/179 (59%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI- 60
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A G +V+DVT +F+ V +W Q++D + + N
Sbjct: 61 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID-RYASENVNK 119
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ L+ NKCD K+ + AK EF + ETSAK+ N++ + T+ +I
Sbjct: 120 L---LVGNKCDLTTKKVVDYTTAK--EFADSLGIP-FLETSAKNATNVEQSFMTMAAEI 172
>RGD|619736 [details] [associations]
symbol:Rab1a "RAB1A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0032482 "Rab protein signal transduction" evidence=IC]
[GO:0043025 "neuronal cell body" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619736 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0000139 GO:GO:0005789 GO:GO:0015031 GO:GO:0043025
PROSITE:PS51419 GO:GO:0006888 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07874 CTD:19324 EMBL:J02998 EMBL:BC066662
IPI:IPI00421897 PIR:A39963 RefSeq:NP_112352.2 UniGene:Rn.106743
ProteinModelPortal:Q6NYB7 SMR:Q6NYB7 IntAct:Q6NYB7 STRING:Q6NYB7
PhosphoSite:Q6NYB7 PRIDE:Q6NYB7 Ensembl:ENSRNOT00000006950
GeneID:81754 KEGG:rno:81754 UCSC:RGD:619736 NextBio:615518
ArrayExpress:Q6NYB7 Genevestigator:Q6NYB7
GermOnline:ENSRNOG00000004992 GO:GO:0032482 Uniprot:Q6NYB7
Length = 205
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 64/179 (35%), Positives = 106/179 (59%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI- 60
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A G +V+DVT +F+ V +W Q++D + + N
Sbjct: 61 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID-RYASENVNK 119
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ L+ NKCD K+ + AK EF + ETSAK+ N++ + T+ +I
Sbjct: 120 L---LVGNKCDLTTKKVVDYTTAK--EFADSLGIP-FLETSAKNATNVEQSFMTMAAEI 172
>TAIR|locus:2029167 [details] [associations]
symbol:RAB18 "RAB GTPASE HOMOLOG B18" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC022314 EMBL:AC006423
HOGENOM:HOG000233968 HSSP:P07560 KO:K07910 OMA:LETYTTR EMBL:U75603
EMBL:AF370263 EMBL:AY063080 EMBL:AK227664 EMBL:AY086878
IPI:IPI00533062 PIR:A96503 RefSeq:NP_001077675.1
RefSeq:NP_001117435.1 RefSeq:NP_175056.1 UniGene:At.24663
ProteinModelPortal:O23657 SMR:O23657 STRING:O23657 PaxDb:O23657
PRIDE:O23657 EnsemblPlants:AT1G43890.1 EnsemblPlants:AT1G43890.2
EnsemblPlants:AT1G43890.3 GeneID:840987 KEGG:ath:AT1G43890
TAIR:At1g43890 InParanoid:O23657 PhylomeDB:O23657
ProtClustDB:CLSN2679595 Genevestigator:O23657 Uniprot:O23657
Length = 212
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 73/211 (34%), Positives = 111/211 (52%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GK+S++ + F TIGVDF +K L+ E ++L +WD
Sbjct: 11 DYLFKVLLIGDSGVGKSSLLLSFTSNTFDD-LSPTIGVDFKVKYLTIG-EKKLKLAIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLK-WKQDLDAKVTLPDGNPIPCV-- 572
AGQERF +T YY+ A G +V+DVTR TF + W +++D T D C+
Sbjct: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQD-----CIKM 123
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
L+ NK D+ E + ID F +E+ + E SAK +N++ + LV KILE +
Sbjct: 124 LVGNKVDKESERAVSKKEGID-FAREYGCL-FLECSAKTRVNVEQCFEELVLKILETPSL 181
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
A G S +F N +Q T + C
Sbjct: 182 TAEGSSGGKKN-IFKQNP-AQTTSTSSSYCC 210
>ZFIN|ZDB-GENE-040718-263 [details] [associations]
symbol:rab3c "RAB3C, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-263 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 OMA:RLVDLIC
EMBL:BX510928 IPI:IPI00489060 UniGene:Dr.33726 SMR:A8WHV3
Ensembl:ENSDART00000132687 Uniprot:A8WHV3
Length = 224
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 62/182 (34%), Positives = 104/182 (57%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 24 DYMFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTV-YKNDKRIKLQIWDT 82
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F AV W + K D + +L
Sbjct: 83 AGQERYRTITTAYYRGAMGFILMYDITNEESFAAVQDWATQI--KTYSWDNAQV--ILAG 138
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--NDKVQ 633
NKCD +E I + + + E +FETSAKDNIN+ LV I + +D ++
Sbjct: 139 NKCDMEEERIVSVDS--GRLLAEQLGFEFFETSAKDNINVKQTFDRLVDIICDKMSDTLE 196
Query: 634 AN 635
A+
Sbjct: 197 AD 198
>FB|FBgn0262518 [details] [associations]
symbol:Rab8 "Rab8" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014296 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104031 OMA:SNVEQHA EMBL:AY069671 EMBL:D84347
EMBL:AB112933 RefSeq:NP_001246837.1 RefSeq:NP_524172.1
UniGene:Dm.2015 SMR:O18338 MINT:MINT-864123 STRING:O18338
EnsemblMetazoa:FBtr0074921 EnsemblMetazoa:FBtr0308833 GeneID:40168
KEGG:dme:Dmel_CG8287 UCSC:CG8287-RA CTD:40168 FlyBase:FBgn0262518
InParanoid:O18338 OrthoDB:EOG4HT788 GenomeRNAi:40168 NextBio:817374
Uniprot:O18338
Length = 207
Score = 281 (104.0 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 60/183 (32%), Positives = 111/183 (60%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF ++ + D++ I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T+ +F+ + W ++++ + + +LL
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASAD----VEKMLLG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI-LENDK-V 632
NKC+ K ++ ++ E+ + ETSAK +IN+++A TL I + +K +
Sbjct: 121 NKCELTDKRQVSKERG--EQLAIEYGIK-FMETSAKASINVEEAFLTLASDIKAKTEKRM 177
Query: 633 QAN 635
+AN
Sbjct: 178 EAN 180
>UNIPROTKB|E1BNX1 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042588 "zymogen granule" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0017157 GO:GO:0042588 GO:GO:0018125
GeneTree:ENSGT00690000101942 CTD:9545 KO:K07884 OMA:GKGPTLG
EMBL:DAAA02019486 IPI:IPI00709014 RefSeq:NP_001178304.1
UniGene:Bt.20052 Ensembl:ENSBTAT00000002783 GeneID:100139105
KEGG:bta:100139105 NextBio:20790194 Uniprot:E1BNX1
Length = 219
Score = 281 (104.0 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 60/173 (34%), Positives = 98/173 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + H+ I+LQ+WD
Sbjct: 20 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++DV +F AV W + K D + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQI--KTYSWDNAQV--ILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + P + + + +FE SAK+NIN+ + LV I E
Sbjct: 135 NKCDLEDERVV--PTEEGRRLADDLGFEFFEASAKENINVKQVFERLVDVICE 185
>MGI|MGI:1928750 [details] [associations]
symbol:Rab2a "RAB2A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=ISO] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1928750 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0042470 GO:GO:0006886 GO:GO:0007264 GO:GO:0000139
GO:GO:0016192 GO:GO:0005789 GO:GO:0043025 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0033116
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5862 KO:K07877
OrthoDB:EOG41G354 OMA:KIGPQHS ChiTaRS:RAB2A EMBL:X95403
EMBL:AK079071 EMBL:AK135421 EMBL:AK146179 EMBL:AK150030
EMBL:AK159607 EMBL:AK160333 EMBL:AK163320 IPI:IPI00137227
RefSeq:NP_067493.1 UniGene:Mm.397471 UniGene:Mm.467703
ProteinModelPortal:P53994 SMR:P53994 IntAct:P53994 STRING:P53994
PhosphoSite:P53994 PaxDb:P53994 PRIDE:P53994
Ensembl:ENSMUST00000060232 GeneID:59021 KEGG:mmu:59021
InParanoid:P53994 NextBio:314584 Bgee:P53994 CleanEx:MM_RAB2A
Genevestigator:P53994 GermOnline:ENSMUSG00000047187 Uniprot:P53994
Length = 212
Score = 281 (104.0 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 70/214 (32%), Positives = 118/214 (55%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
+L+K ++IG+ G GK+ ++ ++ + F P + TIGV+F ++++ D + I +LQ+WD A
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQI-KLQIWDTA 63
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQE F ++TR YY+ A GA +V+D+TR TF+ + W +D + N + +L+ N
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQH---SNSNMV-IMLIGN 119
Query: 577 KCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AKTLVQKILEN-- 629
K D + + + + F +EH + ETSAK N+++A AK + +KI E
Sbjct: 120 KSDLESRREVKKEEG--EAFAREHGLI-FMETSAKTASNVEEAFINTAKEIYEKIQEGVF 176
Query: 630 D-KVQANG----DSHATSEAVFSLNRNSQETKNG 658
D +ANG HA + A N+ Q+ G
Sbjct: 177 DINNEANGIKIGPQHAATNASHGSNQGGQQAGGG 210
>TAIR|locus:2102777 [details] [associations]
symbol:RABA2c "RAB GTPase homolog A2C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0009504
"cell plate" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005794 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0009504
EMBL:AL096859 KO:K07976 HOGENOM:HOG000233968 EMBL:Y08904
EMBL:AY065380 EMBL:AY096545 EMBL:AY087450 IPI:IPI00527142
PIR:T12965 RefSeq:NP_190267.1 UniGene:At.109 UniGene:At.73032
ProteinModelPortal:Q96283 SMR:Q96283 PaxDb:Q96283 PRIDE:Q96283
EnsemblPlants:AT3G46830.1 GeneID:823836 KEGG:ath:AT3G46830
TAIR:At3g46830 InParanoid:Q96283 OMA:PQGTTIN PhylomeDB:Q96283
ProtClustDB:PLN03110 Genevestigator:Q96283 GermOnline:AT3G46830
Uniprot:Q96283
Length = 217
Score = 281 (104.0 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 69/219 (31%), Positives = 119/219 (54%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
++ + ++L+KI++IG+ G GK++I+ R+ F ++TIGV+FA + + +TI +
Sbjct: 4 RVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTI-K 62
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
Q+WD AGQER+ +T YY+ AVGA +V+D+T+ TFD VL+W ++L D N I
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHA---DSN-I 118
Query: 570 PCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
++ NK D +A + + E + ETSA + N++ A +T++ +I
Sbjct: 119 VIMMAGNKSDLNHLRSVAEEDG---QSLAEKEGLSFLETSALEATNVEKAFQTILGEIYH 175
Query: 629 --NDKVQANGDSHATSEAVFSLNR--NSQETKNGRNCAC 663
+ K A ++ A + A+ N +T G AC
Sbjct: 176 IISKKALAAQEAAAANSAIPGQGTTINVDDTSGGAKRAC 214
>ZFIN|ZDB-GENE-040426-2860 [details] [associations]
symbol:rab11ba "RAB11B, member RAS oncogene
family, a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-2860
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HSSP:P35278 KO:K07905 EMBL:BC048889
IPI:IPI00509689 RefSeq:NP_999935.1 UniGene:Dr.76644
ProteinModelPortal:Q802D1 SMR:Q802D1 STRING:Q802D1 PRIDE:Q802D1
GeneID:406798 KEGG:dre:406798 CTD:406798 InParanoid:Q802D1
NextBio:20818308 ArrayExpress:Q802D1 Bgee:Q802D1 Uniprot:Q802D1
Length = 218
Score = 281 (104.0 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 59/175 (33%), Positives = 111/175 (63%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+++++IG+ G GK++++ R+ F+ ++TIGV+FA + + D +TI + Q+
Sbjct: 6 DEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+ + T++ V +W ++L D N I +
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA---DNN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
L+ NK D + + + A+ F +++N S + ETSA D+ N+++A K ++ +I
Sbjct: 121 LVGNKSDLRHLRAVPTDEARA--FAEKNNLS-FIETSALDSTNVEEAFKNILTEI 172
>DICTYBASE|DDB_G0292268 [details] [associations]
symbol:rab2A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0292268 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000155_GR GO:GO:0015031 PROSITE:PS51419
EMBL:AAFI02000189 eggNOG:COG1100 KO:K07976 EMBL:U02926
RefSeq:XP_629685.1 ProteinModelPortal:P36409 SMR:P36409
PRIDE:P36409 EnsemblProtists:DDB0216191 GeneID:8628601
KEGG:ddi:DDB_G0292268 OMA:KIGPQHS ProtClustDB:CLSZ2429432
Uniprot:P36409
Length = 207
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 66/201 (32%), Positives = 118/201 (58%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
FL+K ++IG+ G GK+ ++ ++ + F P + TIGV+F ++++ D++ I +LQ+WD A
Sbjct: 4 FLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAI-KLQIWDTA 62
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQE F ++TR YY+ + GA +V+D+TR TF+ + W +D A+ + + N + +L+ N
Sbjct: 63 GQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKD--AR-SYANSN-MTIILIGN 118
Query: 577 KCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
K D + K ++ + +F E+ + ETSAK N+++A KI E K+Q
Sbjct: 119 KSDMESKRAVSYEEGR--QFADENGLI-FLETSAKTASNVEEAFVNTASKIYE--KIQ-K 172
Query: 636 GDSHATSEAVFSLNRNSQETK 656
GD +E+ F + + +K
Sbjct: 173 GDFDINNES-FGIKLGAPTSK 192
>UNIPROTKB|Q5ZLG1 [details] [associations]
symbol:RAB18 "Ras-related protein Rab-18" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0001654 "eye development"
evidence=ISS] [GO:0007420 "brain development" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0007420 GO:GO:0015031 GO:GO:0005622 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 InterPro:IPR025662 GO:GO:0001654
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 KO:K07910 OMA:LETYTTR
OrthoDB:EOG4VT5Z6 EMBL:AJ719773 IPI:IPI00577245
RefSeq:NP_001006355.1 UniGene:Gga.42447 ProteinModelPortal:Q5ZLG1
SMR:Q5ZLG1 IntAct:Q5ZLG1 PRIDE:Q5ZLG1 Ensembl:ENSGALT00000012033
GeneID:420483 KEGG:gga:420483 CTD:22931 InParanoid:Q5ZLG1
NextBio:20823383 Uniprot:Q5ZLG1
Length = 206
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 72/202 (35%), Positives = 109/202 (53%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KIL+IGE G GK+S++ R+ F P ATIGVDF +K +S D +L +WD AGQE
Sbjct: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKA-KLAIWDTAGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +T YY+ A G +V+DVTR TF + W +L+ T N I +L+ NK D
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTR---NDIVKMLVGNKID 125
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDSH 639
+ + N +F ++H+ + E SAK + A + LV+KI++ + +S
Sbjct: 126 KENREVDRNEGL--KFARKHSML-FIEASAKTCDGVQCAFEELVEKIIQTPGLW---ESE 179
Query: 640 ATSEAVFSLNRNSQETKNGRNC 661
+ ++ V L+ N +E G C
Sbjct: 180 SQNKGV-KLS-NKEEGHGGGAC 199
>UNIPROTKB|E2RFR4 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:AAEX03012413
Ensembl:ENSCAFT00000027638 NextBio:20852320 Uniprot:E2RFR4
Length = 221
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 60/173 (34%), Positives = 98/173 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + H+ I+LQ+WD
Sbjct: 22 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDT 80
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++DV +F AV W + K D + +L+
Sbjct: 81 AGQERYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQI--KTYSWDNAQV--ILVG 136
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + P + + + +FE SAK+NIN+ + LV I E
Sbjct: 137 NKCDLEDERVV--PTEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICE 187
>UNIPROTKB|B4DMK0 [details] [associations]
symbol:RAB11B "cDNA FLJ61134, highly similar to Ras-related
protein Rab-11B" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HOGENOM:HOG000233968 UniGene:Hs.626404
EMBL:AK297498 IPI:IPI01022454 ProteinModelPortal:B4DMK0 SMR:B4DMK0
STRING:B4DMK0 PRIDE:B4DMK0 Uniprot:B4DMK0
Length = 179
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 59/172 (34%), Positives = 109/172 (63%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + + D +TI + Q+
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+ + T++ V +W ++L D N I +
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA---DSN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLV 623
L+ NK D + + + A+ F +++N S + ETSA D+ N+++A K ++
Sbjct: 121 LVGNKSDLRHLRAVPTDEARA--FAEKNNLS-FIETSALDSTNVEEAFKNIL 169
>UNIPROTKB|F1S5W6 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042588 "zymogen granule" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0017157 GO:GO:0042588 GO:GO:0018125
GeneTree:ENSGT00690000101942 OMA:GKGPTLG EMBL:CU855518
Ensembl:ENSSSCT00000014878 Uniprot:F1S5W6
Length = 227
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 59/173 (34%), Positives = 98/173 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + H+ I+LQ+WD
Sbjct: 28 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+ +F AV W + K D + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWSTQI--KTYSWDNAQV--ILVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + P + + + +FE SAK+NIN+ + LV I E
Sbjct: 143 NKCDLEDERVV--PTEEGRRLADDLGFEFFEASAKENINVKQVFERLVDIICE 193
>MGI|MGI:2442982 [details] [associations]
symbol:Rab8b "RAB8B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0030911 "TPR domain binding"
evidence=ISO] [GO:0031346 "positive regulation of cell projection
organization" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0034332 "adherens junction organization"
evidence=ISO] [GO:0045046 "protein import into peroxisome membrane"
evidence=ISO] [GO:0045335 "phagocytic vesicle" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0051286 "cell tip" evidence=ISO] [GO:0051461 "positive
regulation of corticotropin secretion" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:2442982
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0048471 GO:GO:0007264 GO:GO:0051286 GO:GO:0031410
GO:GO:0005778 GO:GO:0034332 PROSITE:PS51419 GO:GO:0051461
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0031346
GO:GO:0045046 HOGENOM:HOG000233968 OMA:TSFFRCL CTD:51762 KO:K07902
ChiTaRS:RAB8B EMBL:AK084650 EMBL:AK155621 EMBL:BC059208
IPI:IPI00411115 RefSeq:NP_775589.1 UniGene:Mm.260376
ProteinModelPortal:P61028 SMR:P61028 IntAct:P61028 STRING:P61028
PhosphoSite:P61028 PaxDb:P61028 PRIDE:P61028
Ensembl:ENSMUST00000041139 GeneID:235442 KEGG:mmu:235442
InParanoid:P61028 NextBio:382678 Bgee:P61028 CleanEx:MM_RAB8B
Genevestigator:P61028 GermOnline:ENSMUSG00000036943 Uniprot:P61028
Length = 207
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 64/204 (31%), Positives = 116/204 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVERMILG 120
Query: 576 NKCDQ-PKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--N 629
NKCD K ++ + ID IK + ETSAK + N+++A TL + I+ N
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIK------FLETSAKSSTNVEEAFFTLARDIMTKLN 174
Query: 630 DKVQANGDSHATSEAVFSLNRNSQ 653
K+ + S A + +R+ +
Sbjct: 175 RKMNDSNSSGAGGPVKITESRSKK 198
>RGD|620924 [details] [associations]
symbol:Rab3d "RAB3D, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA;ISO] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IEA;ISO] [GO:0030133 "transport vesicle" evidence=IDA]
[GO:0042588 "zymogen granule" evidence=IEA;ISO] [GO:0051020 "GTPase
binding" evidence=IPI] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620924 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 UniGene:Rn.9822
CTD:9545 KO:K07884 OMA:GKGPTLG EMBL:U90206 EMBL:BC081741
EMBL:S68808 EMBL:M83681 IPI:IPI00213685 PIR:I67631
RefSeq:NP_542147.1 ProteinModelPortal:Q63942 SMR:Q63942
IntAct:Q63942 STRING:Q63942 PhosphoSite:Q63942 PRIDE:Q63942
Ensembl:ENSRNOT00000015609 GeneID:140665 KEGG:rno:140665
UCSC:RGD:620924 InParanoid:Q63942 NextBio:620635
Genevestigator:Q63942 GermOnline:ENSRNOG00000011582 Uniprot:Q63942
Length = 219
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 61/192 (31%), Positives = 102/192 (53%)
Query: 437 ITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFA 496
+ + S SP ++++K+L+IG GKTS + RY F+P + +T+G+DF
Sbjct: 1 MASASEPPASPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
Query: 497 LKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQD 556
+K + + H+ I+LQ+WD AGQER+ +T YY+ A+G +++D+ +F AV W
Sbjct: 61 VKTV-YRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQ 119
Query: 557 LDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINID 616
+ K D + +L+ NKCD E + + + F +FE SAK+NIN+
Sbjct: 120 I--KTYSWDNAQV--ILVGNKCDLEDERVVSAEDG-QRLAGDLGFE-FFEASAKENINVK 173
Query: 617 DAAKTLVQKILE 628
+ LV I +
Sbjct: 174 QVFERLVDIICD 185
>RGD|628764 [details] [associations]
symbol:Rab8b "RAB8B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0030911 "TPR domain binding"
evidence=IPI] [GO:0031346 "positive regulation of cell projection
organization" evidence=IDA] [GO:0031410 "cytoplasmic vesicle"
evidence=IDA] [GO:0034332 "adherens junction organization"
evidence=IDA] [GO:0045046 "protein import into peroxisome membrane"
evidence=IEA;ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0051286 "cell tip" evidence=IDA] [GO:0051461
"positive regulation of corticotropin secretion" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:628764 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0048471
GO:GO:0007264 GO:GO:0051286 GO:GO:0031410 GO:GO:0005778
GO:GO:0034332 PROSITE:PS51419 GO:GO:0051461 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0031346 GO:GO:0045046
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104031 OMA:TSFFRCL
CTD:51762 KO:K07902 EMBL:U53475 IPI:IPI00189690 RefSeq:NP_695229.1
UniGene:Rn.10995 ProteinModelPortal:P70550 SMR:P70550 IntAct:P70550
STRING:P70550 PhosphoSite:P70550 PRIDE:P70550
Ensembl:ENSRNOT00000024286 GeneID:266688 KEGG:rno:266688
UCSC:RGD:628764 InParanoid:P70550 NextBio:624500
ArrayExpress:P70550 Genevestigator:P70550
GermOnline:ENSRNOG00000018009 Uniprot:P70550
Length = 207
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 64/204 (31%), Positives = 116/204 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVERMILG 120
Query: 576 NKCDQ-PKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--N 629
NKCD K ++ + ID IK + ETSAK + N+++A TL + I+ N
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIK------FLETSAKSSTNVEEAFFTLARDIMTKLN 174
Query: 630 DKVQANGDSHATSEAVFSLNRNSQ 653
K+ + S A + +R+ +
Sbjct: 175 RKMNDSNSSGAGGPVKITESRSKK 198
>UNIPROTKB|P70550 [details] [associations]
symbol:Rab8b "Ras-related protein Rab-8B" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:628764 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0048471 GO:GO:0007264 GO:GO:0051286
GO:GO:0031410 GO:GO:0005778 GO:GO:0034332 PROSITE:PS51419
GO:GO:0051461 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GO:GO:0031346 GO:GO:0045046 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 OMA:TSFFRCL CTD:51762 KO:K07902
EMBL:U53475 IPI:IPI00189690 RefSeq:NP_695229.1 UniGene:Rn.10995
ProteinModelPortal:P70550 SMR:P70550 IntAct:P70550 STRING:P70550
PhosphoSite:P70550 PRIDE:P70550 Ensembl:ENSRNOT00000024286
GeneID:266688 KEGG:rno:266688 UCSC:RGD:628764 InParanoid:P70550
NextBio:624500 ArrayExpress:P70550 Genevestigator:P70550
GermOnline:ENSRNOG00000018009 Uniprot:P70550
Length = 207
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 64/204 (31%), Positives = 116/204 (56%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + + ++L
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVERMILG 120
Query: 576 NKCDQ-PKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--N 629
NKCD K ++ + ID IK + ETSAK + N+++A TL + I+ N
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIK------FLETSAKSSTNVEEAFFTLARDIMTKLN 174
Query: 630 DKVQANGDSHATSEAVFSLNRNSQ 653
K+ + S A + +R+ +
Sbjct: 175 RKMNDSNSSGAGGPVKITESRSKK 198
>TAIR|locus:2024276 [details] [associations]
symbol:RAB11c "RAB GTPase 11C" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005886
"plasma membrane" evidence=ISM;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0005768 "endosome" evidence=IDA] [GO:0009504 "cell plate"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0019932
"second-messenger-mediated signaling" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 GO:GO:0000910
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0009504 EMBL:AC000132
KO:K07976 HOGENOM:HOG000233968 EMBL:U74669 EMBL:AY045620
EMBL:AY133657 EMBL:AY085684 IPI:IPI00547311 PIR:A86230
RefSeq:NP_172434.1 UniGene:At.20265 ProteinModelPortal:O04486
SMR:O04486 IntAct:O04486 STRING:O04486 PaxDb:O04486 PRIDE:O04486
EnsemblPlants:AT1G09630.1 GeneID:837490 KEGG:ath:AT1G09630
TAIR:At1g09630 InParanoid:O04486 OMA:AKKPCCS PhylomeDB:O04486
ProtClustDB:CLSN2679279 Genevestigator:O04486 GermOnline:AT1G09630
Uniprot:O04486
Length = 217
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 59/180 (32%), Positives = 111/180 (61%)
Query: 449 SKMPDKR-EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
++ PD+ ++L+K+++IG+ G GK++++ R+ F ++TIGV+FA + L + T+
Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ A+GA +V+DVT+ TF+ V +W ++L D N
Sbjct: 62 -KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHA---DSN 117
Query: 568 PIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
I +L+ NK D + +A A+ + ++ S + ETSA + +N++ A +T++ ++
Sbjct: 118 -IVIMLIGNKTDLKHLRAVATEDAQ--SYAEKEGLS-FIETSALEALNVEKAFQTILSEV 173
>TAIR|locus:2093437 [details] [associations]
symbol:RABG3c "RAB GTPase homolog G3C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005634 GO:GO:0005794
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0015031
EMBL:AB012247 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233968
KO:K07897 HSSP:P32939 EMBL:AB071848 EMBL:BT006376 EMBL:AK227936
EMBL:AY084691 IPI:IPI00543139 RefSeq:NP_188231.1 UniGene:At.7607
ProteinModelPortal:Q9LW76 SMR:Q9LW76 PaxDb:Q9LW76 PRIDE:Q9LW76
EnsemblPlants:AT3G16100.1 GeneID:820855 KEGG:ath:AT3G16100
TAIR:At3g16100 InParanoid:Q9LW76 OMA:ECIAKNA PhylomeDB:Q9LW76
ProtClustDB:CLSN2679478 Genevestigator:Q9LW76 Uniprot:Q9LW76
Length = 206
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 61/182 (33%), Positives = 101/182 (55%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ ++V++ FS Y+ATIG DF K + D + I L
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQID-DRIFTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V DV +F+ + W+++ + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFP 119
Query: 571 CVLLANKCDQP--KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
V+L NK D K + K + +FETSAKD +N+D A + + + L+
Sbjct: 120 FVVLGNKTDVDGGKSRVVTEK-KAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALK 178
Query: 629 ND 630
N+
Sbjct: 179 NE 180
>TAIR|locus:2171943 [details] [associations]
symbol:RABA1c "RAB GTPase homolog A1C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005773
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
EMBL:AB012245 KO:K07976 HOGENOM:HOG000233968 EMBL:AF370219
EMBL:AY059111 EMBL:AY084274 IPI:IPI00534558 RefSeq:NP_199387.1
UniGene:At.7538 HSSP:Q15907 ProteinModelPortal:Q9FK68 SMR:Q9FK68
PaxDb:Q9FK68 PRIDE:Q9FK68 EnsemblPlants:AT5G45750.1 GeneID:834614
KEGG:ath:AT5G45750 TAIR:At5g45750 InParanoid:Q9FK68 OMA:QKQIRDS
PhylomeDB:Q9FK68 ProtClustDB:CLSN2685455 Genevestigator:Q9FK68
Uniprot:Q9FK68
Length = 216
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 70/215 (32%), Positives = 124/215 (57%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K+++IG+ G GK++++ R+ FS ++TIGV+FA + L+ D + +I+ Q+
Sbjct: 8 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD-DKVIKAQI 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+DVTR +TF+ V W ++L D N I +
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHT---DPN-IVVM 122
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA-AKTLVQ--KILEN 629
L+ NK D + +A F ++ + + ETSA + N+++A A+ L Q I+
Sbjct: 123 LVGNKSDL-RHLVAVQTEDAKSFAEKESLY-FMETSALEATNVENAFAEVLTQIHHIVSK 180
Query: 630 DKVQANGDS-HATSEA-VFSLNRNSQETKNGRNCA 662
++A +S + S+ + ++ K G C+
Sbjct: 181 KAMEAASESANVPSKGDKIDIGKDVSAVKKGGCCS 215
>TAIR|locus:2168469 [details] [associations]
symbol:RABA2D "RAB GTPase homolog A2D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0009504
"cell plate" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0009504 EMBL:AB016890 KO:K07976 HOGENOM:HOG000233968
HSSP:P07560 ProtClustDB:PLN03110 EMBL:AF370127 EMBL:AY040051
IPI:IPI00533551 RefSeq:NP_200723.1 UniGene:At.24606
ProteinModelPortal:Q9FIF9 SMR:Q9FIF9 PaxDb:Q9FIF9 PRIDE:Q9FIF9
EnsemblPlants:AT5G59150.1 GeneID:836033 KEGG:ath:AT5G59150
TAIR:At5g59150 InParanoid:Q9FIF9 OMA:VEQDYDY PhylomeDB:Q9FIF9
Genevestigator:Q9FIF9 Uniprot:Q9FIF9
Length = 217
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 65/193 (33%), Positives = 111/193 (57%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+KI++IG+ G GKT+I+ R+ F ++TIGV+FA + L + +T+ + Q+WD
Sbjct: 10 DYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV-KAQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ AVGA +V+D+T+ TFD VL+W ++L D N I ++
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHA---DSN-IVIMMAG 124
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--NDKV 632
NK D +A + + E + ETSA + N++ A +T++ +I + K
Sbjct: 125 NKADLNHLRSVAEEDGQT---LAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKA 181
Query: 633 QANGDSHATSEAV 645
A ++ A + A+
Sbjct: 182 LAAQEAAAANSAI 194
>WB|WBGene00004277 [details] [associations]
symbol:rab-18 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0007264 GO:GO:0015031
GO:GO:0042127 GO:GO:0007281 PROSITE:PS51419 GO:GO:0040020
eggNOG:COG1100 InterPro:IPR025662 GO:GO:0040022
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 KO:K07910
EMBL:FO080242 RefSeq:NP_741092.1 RefSeq:NP_741093.2
ProteinModelPortal:Q8MXS1 SMR:Q8MXS1 PaxDb:Q8MXS1 PRIDE:Q8MXS1
EnsemblMetazoa:Y92C3B.3b GeneID:175272 KEGG:cel:CELE_Y92C3B.3
UCSC:Y92C3B.3b CTD:175272 WormBase:Y92C3B.3a WormBase:Y92C3B.3b
InParanoid:Q8MXS1 OMA:FAKRHRT NextBio:887480 Uniprot:Q8MXS1
Length = 203
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 68/204 (33%), Positives = 106/204 (51%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KIL+IGE G GK+S++ R+V F P ATIGVDF + ++ D + +L +WD AGQE
Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRV-KLAIWDTAGQE 71
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +T YY+ A G V+DVT ++F+ + W Q++D T + N I +++ANK D
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCT--NDNIIK-MMVANKID 128
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDSH 639
P + +F K H + + E SAK + + L++KI++ + N
Sbjct: 129 MPNRVVTREEGL--KFAKRHR-TLFIEASAKTKEGVQCTFEELIEKIIQTPDLWDN---- 181
Query: 640 ATSEAVFSLNRNSQETKNGRNCAC 663
F L + + + G C C
Sbjct: 182 --DRPSFRLGQPTGSSGGGGMCGC 203
WARNING: HSPs involving 1201 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.308 0.126 0.348 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 663 527 0.00091 119 3 11 23 0.38 35
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1451
No. of states in DFA: 615 (65 KB)
Total size of DFA: 276 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 52.03u 0.10s 52.13t Elapsed: 00:00:03
Total cpu time: 52.06u 0.10s 52.16t Elapsed: 00:00:03
Start: Thu Aug 15 11:01:51 2013 End: Thu Aug 15 11:01:54 2013
WARNINGS ISSUED: 2