BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4097
(129 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q20911|CUBN_CAEEL Probable cubilin OS=Caenorhabditis elegans GN=ZC116.3 PE=1 SV=4
Length = 4047
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Query: 2 TPYVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSV- 60
+P +C NT G C CP G+ GDG C + + C V+N CH LATC+ T D +V
Sbjct: 358 SPLSKCHNTLGSYYCDSCPTGYSGDGGNCVKDDS-C-VKNK-CHKLATCKVTDDGYSAVG 414
Query: 61 -ISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
+C CP G G G+G GC S N C C + G C P D Y+C+CE GF G+
Sbjct: 415 DYTCYCPDGYVGDGIGEEGCVKSAS-NVCQNHNCVNAGKCKPTSDTEYKCECEAGFLGK 472
>sp|O60494|CUBN_HUMAN Cubilin OS=Homo sapiens GN=CUBN PE=1 SV=5
Length = 3623
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 1 MTPYVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSV 60
+ P VEC+NT G C CP G+ GDG C T CSV NGGCHP A+C S T+ S+
Sbjct: 318 VAPPVECVNTPGSSHCQACPPGYQGDGRVCTL-TDICSVSNGGCHPDASC---SSTLGSL 373
Query: 61 ISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
CTC PG G+G G GC N C C +G + GY C+C+ G+TG
Sbjct: 374 PLCTCLPGYTGNGYGPNGCV--QLSNICLSHPCLNGQCIDTVS--GYFCKCDSGWTG 426
>sp|O70244|CUBN_RAT Cubilin OS=Rattus norvegicus GN=Cubn PE=1 SV=2
Length = 3623
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 3 PYVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVIS 62
P V C+NT G CG CP G+ GDG C CS+ NGGCHP ATC + +
Sbjct: 317 PLVPCLNTPGSFSCGNCPAGFSGDGRVCTP-VDICSIHNGGCHPEATCSSSPVLGSFLPV 375
Query: 63 CTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
CTCPPG G+G G GC N C C +G + Y C+C+ G++G++
Sbjct: 376 CTCPPGYTGNGYGSNGCV--RLSNICSRHPCVNGQCIETVS--SYFCKCDSGWSGQN 428
>sp|Q9JLB4|CUBN_MOUSE Cubilin OS=Mus musculus GN=Cubn PE=1 SV=3
Length = 3623
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 3 PYVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVIS 62
P V C+NT G CG CP G+ GDG C CS+ NGGCHP ATC +S +
Sbjct: 317 PLVPCLNTPGSFTCGNCPAGFSGDGRVCTPLDI-CSIHNGGCHPDATCSSSSVLGSLLPV 375
Query: 63 CTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
CTCPPG G+G G GC N C C +G + Y C+C+ G+ G++
Sbjct: 376 CTCPPGYTGNGYGSNGCV--RLSNMCSRHPCVNGQCIETVS--SYFCKCDSGWFGQN 428
>sp|Q9TU53|CUBN_CANFA Cubilin OS=Canis familiaris GN=CUBN PE=1 SV=1
Length = 3620
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 1 MTPYVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSV 60
+ P V C+NT G C CP G+ GDG C CSV NGGCHP A+C S + S+
Sbjct: 315 VVPPVMCVNTLGSYHCQACPPGYQGDGRVCTV-IDICSVNNGGCHPEASC---SSVLGSL 370
Query: 61 ISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
CTC PG G+G G GCA + C C +G + GY C+CE G+ G
Sbjct: 371 PLCTCLPGYTGNGYGPNGCA--QLSDTCLSHPCLNGQCIETVS--GYLCKCESGWAG 423
>sp|Q8WWQ8|STAB2_HUMAN Stabilin-2 OS=Homo sapiens GN=STAB2 PE=1 SV=3
Length = 2551
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 17/117 (14%)
Query: 9 NTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPG 68
N+ G C +C G+ G+GT C C + NGGC A C+ T+ R CTC G
Sbjct: 1449 NSDGTASC-KCAAGFQGNGTIC-TAINACEISNGGCSAKADCKRTTPGRR---VCTCKAG 1503
Query: 69 MGGSGVGLMGCAYGMSGNPC----GGVTCEHGGICAPIGDRGYRCQCEPGFTGESEL 121
G G+ + NPC GG C+ C G C C P +TG+ ++
Sbjct: 1504 YTGDGI------VCLEINPCLENHGG--CDKNAECTQTGPNQAACNCLPAYTGDGKV 1552
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSG---V 74
+C + GDG TC C NGGC +A C + + +SC+C G G G
Sbjct: 2068 ECNLDYEGDGITCTV-VDFCKQDNGGCAKVARCSQKG----TKVSCSCQKGYKGDGHSCT 2122
Query: 75 GLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
+ CA G++G C C G ++C+C+ + G+
Sbjct: 2123 EIDPCADGLNGG------CHEHATCKMTGPGKHKCECKSHYVGD 2160
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
Query: 5 VECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCT 64
EC T + C + GDG C C +NGGC A C T R +CT
Sbjct: 1528 AECTQTGPNQAACNCLPAYTGDGKVCTLINV-CLTKNGGCSEFAICNHTGQVER---TCT 1583
Query: 65 CPPGMGGSGVGLMGCAYG-MSGNP 87
C P G G G Y + NP
Sbjct: 1584 CKPNYIGDGFTCRGSIYQELPKNP 1607
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 5 VECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCT 64
+C T R+ C G+ GDG C + C +GGC A C +T + +C
Sbjct: 1486 ADCKRTTPGRRVCTCKAGYTGDGIVCLE-INPCLENHGGCDKNAECTQTGP---NQAACN 1541
Query: 65 CPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
C P G G ++ N GG C IC G C C+P + G+
Sbjct: 1542 CLPAYTGDGKVCTLINVCLTKN--GG--CSEFAICNHTGQVERTCTCKPNYIGD 1591
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 13/95 (13%)
Query: 27 GTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGN 86
G C + T+ C CH ATC ++ T SC C G G G +
Sbjct: 820 GRLCDKQTSACGPYVQFCHIHATCEYSNGTA----SCICKAGYEGDGT------LCSEMD 869
Query: 87 PCGGVT---CEHGGICAPIGDRGYRCQCEPGFTGE 118
PC G+T C C G + C C+ G+TG
Sbjct: 870 PCTGLTPGGCSRNAECIKTGTGTHTCVCQQGWTGN 904
>sp|Q8R4Y4|STAB1_MOUSE Stabilin-1 OS=Mus musculus GN=Stab1 PE=1 SV=1
Length = 2571
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 45/115 (39%), Gaps = 7/115 (6%)
Query: 2 TPYVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVI 61
+PY C ++ C G+ GDG C Q C V NGGCH A C T +
Sbjct: 1468 SPYANCTKVAPGQRTCTCQDGYTGDGELC-QEINSCLVHNGGCHVHAECIPTGP---QQV 1523
Query: 62 SCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFT 116
SC+C G G G+ S N G C +C GD C C+ T
Sbjct: 1524 SCSCREGYSGDGIQTCKLLDPCSQNNGG---CSPYAVCKSTGDGQRTCSCDATHT 1575
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMG 78
C G+ G+G C C V NGGCH LATC+ R CTCPP GG G G
Sbjct: 935 CKLGFAGNGYECSP-IDPCRVGNGGCHGLATCKAVGGGQR---VCTCPPHFGGDGFSCYG 990
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
+C G+ GDG C C +GGC A C + V +V++CTC P G G
Sbjct: 2077 ECSLGYEGDGRVCTVADL-CQKGHGGCSKHANCSQ----VGTVVTCTCLPDYEGDGWSCR 2131
Query: 78 GCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
+ G+ G C C G RC+C G+ G+
Sbjct: 2132 ARDPCLDGHRGG---CSEHADCLNTGPNTRRCECHVGYVGD 2169
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 3 PYVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVIS 62
P CI C G+ G+G+ C + C+ +GGC P A C + + R+
Sbjct: 1427 PNANCIQDSAGIPACVCAAGYSGNGSYCSE-VDPCASGHGGCSPYANCTKVAPGQRT--- 1482
Query: 63 CTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
CTC G G G + N GG C C P G + C C G++G+
Sbjct: 1483 CTCQDGYTGDGELCQEINSCLVHN--GG--CHVHAECIPTGPQQVSCSCREGYSGD 1534
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 43/117 (36%), Gaps = 13/117 (11%)
Query: 5 VECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCT 64
C+ +G +C C G+ G+G +C++ GGC A C C
Sbjct: 836 AHCVIQEGVARC-VCHDGFEGNGFSCKRSNPCSRPDRGGCSENAECVPGD---LGTHHCI 891
Query: 65 CPPGMGGSG---VGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
C G G G V + C G C +C+ +G RC C+ GF G
Sbjct: 892 CHKGWSGDGRICVAIDECGLDTRGG------CHADALCSYVGPGQSRCTCKLGFAGN 942
>sp|Q07008|NOTC1_RAT Neurogenic locus notch homolog protein 1 OS=Rattus norvegicus
GN=Notch1 PE=2 SV=2
Length = 2531
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 6 ECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTC 65
+C+ + CG CP G+ G TCRQ CS G C TC + R C C
Sbjct: 154 QCLPFESSYICG-CPPGF--HGPTCRQDVNECSQNPGLCRHGGTCHNEIGSYR----CAC 206
Query: 66 PPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
G L PC C++GG C P GD + C C PGF G++
Sbjct: 207 RATHTGPHCELPYV-------PCSPSPCQNGGTCRPTGDTTHECACLPGFAGQN 253
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 9/56 (16%)
Query: 62 SCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
C CPPG G +PC C +GG C P + Y C C PGF G
Sbjct: 126 KCRCPPGWSGKSC--------QQADPCASNPCANGGQCLPF-ESSYICGCPPGFHG 172
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 43/113 (38%), Gaps = 15/113 (13%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCP 66
CI+ KC CP + G TC C+ C C+E+ D SC CP
Sbjct: 806 CIDDVAGYKCN-CPLPYTG--ATCEVVLAPCAT--SPCKNSGVCKESED--YESFSCVCP 858
Query: 67 PGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
G G + N C C HG C + YRC C+ G+TG +
Sbjct: 859 TGWQGQTCEI-------DINECVKSPCRHGASCQNT-NGSYRCLCQAGYTGRN 903
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMG 78
CP G+ +G C T C+ C TC D + S +C CPPG GS
Sbjct: 971 CPTGF--NGIHCENNTPDCT--ESSCFNGGTC---VDGINS-FTCLCPPGFTGS-----Y 1017
Query: 79 CAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
C Y + N C C HGG C Y+C C G+TG
Sbjct: 1018 CQYDV--NECDSRPCLHGGTCQD-SYGTYKCTCPQGYTG 1053
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 62 SCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
+C+CP G G + L A NPC +GG C + Y+C+C PG++G+S
Sbjct: 86 ACSCPLGFSGP-LCLTPLANACLANPC-----RNGGTCDLLTLTEYKCRCPPGWSGKS 137
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 29 TCRQGTTGCSVQN-------GGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMGCAY 81
TC QG TG + QN C C +T+ + C C G G ++ +
Sbjct: 1046 TCPQGYTGLNCQNLVRWCDSAPCKNGGKCWQTN----TQYHCECRSGWTGFNCDVLSVSC 1101
Query: 82 GMSGNPCG---GVTCEHGGICAPIGDRGYRCQCEPGFTG 117
++ G + C+HGG+C D+ Y C C+ G+TG
Sbjct: 1102 EVAAQKRGIDVTLLCQHGGLCVDEEDKHY-CHCQAGYTG 1139
>sp|Q9NY15|STAB1_HUMAN Stabilin-1 OS=Homo sapiens GN=STAB1 PE=1 SV=3
Length = 2570
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMG 78
C G+ GDG C C NGGCH LATCR R CTCPPG GG G G
Sbjct: 934 CKLGFAGDGYQCSP-IDPCRAGNGGCHGLATCRAVGGGQR---VCTCPPGFGGDGFSCYG 989
Query: 79 CAY 81
+
Sbjct: 990 DIF 992
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 4 YVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISC 63
+ ECI T + C G+ GDG + CS NGGC P ATC+ T D R +C
Sbjct: 1511 HAECIPTGPQQVSCSCREGYSGDGIRTCELLDPCSKNNGGCSPYATCKSTGDGQR---TC 1567
Query: 64 TC 65
TC
Sbjct: 1568 TC 1569
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 13/118 (11%)
Query: 4 YVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISC 63
+ C++ +G +C +C G+ GDG +C GGC A C S C
Sbjct: 834 HARCVSQEGVARC-RCLDGFEGDGFSCTPSNPCSHPDRGGCSENAECVPGS---LGTHHC 889
Query: 64 TCPPGMGGSG---VGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
TC G G G V + C M G C +C+ +G RC C+ GF G+
Sbjct: 890 TCHKGWSGDGRVCVAIDECELDMRGG------CHTDALCSYVGPGQSRCTCKLGFAGD 941
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 45/115 (39%), Gaps = 7/115 (6%)
Query: 2 TPYVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVI 61
+P+ C ++ C G++GDG C Q C + +GGCH A C T +
Sbjct: 1467 SPHANCTKVAPGQRTCTCQDGYMGDGELC-QEINSCLIHHGGCHIHAECIPTGP---QQV 1522
Query: 62 SCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFT 116
SC+C G G G+ S N G C C GD C C+ T
Sbjct: 1523 SCSCREGYSGDGIRTCELLDPCSKNNGG---CSPYATCKSTGDGQRTCTCDTAHT 1574
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 18/106 (16%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
+C G+ GDG C C +GGC A C + V ++++CTC P G G
Sbjct: 2077 ECSLGYEGDGRVCTVADL-CQDGHGGCSEHANCSQ----VGTMVTCTCLPDYEGDGWSCR 2131
Query: 78 GCAYGMSGNPC-----GGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
+ NPC GG C C G RC+C G+ G+
Sbjct: 2132 ------ARNPCTDGHRGG--CSEHANCLSTGLNTRRCECHAGYVGD 2169
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 18/129 (13%)
Query: 3 PYVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVIS 62
P C+ C G+ G+G C + C+ +GGC P A C + + R+
Sbjct: 1426 PNANCVQDSAGASTCACAAGYSGNGIFCSE-VDPCAHGHGGCSPHANCTKVAPGQRT--- 1481
Query: 63 CTCPPGMGGSG---VGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
CTC G G G + C G C C P G + C C G++G+
Sbjct: 1482 CTCQDGYMGDGELCQEINSCLIHHGG-------CHIHAECIPTGPQQVSCSCREGYSGDG 1534
Query: 120 ----ELLVP 124
ELL P
Sbjct: 1535 IRTCELLDP 1543
>sp|Q01705|NOTC1_MOUSE Neurogenic locus notch homolog protein 1 OS=Mus musculus GN=Notch1
PE=1 SV=3
Length = 2531
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
+CP G+ G TCRQ CS G C TC + R C C G L
Sbjct: 165 RCPPGF--HGPTCRQDVNECSQNPGLCRHGGTCHNEIGSYR----CACRATHTGPHCELP 218
Query: 78 GCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
PC C++GG C P GD + C C PGF G++
Sbjct: 219 YV-------PCSPSPCQNGGTCRPTGDTTHECACLPGFAGQN 253
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 9/56 (16%)
Query: 62 SCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
C CPPG G +PC C +GG C P + Y C+C PGF G
Sbjct: 126 KCRCPPGWSGKSC--------QQADPCASNPCANGGQCLPF-ESSYICRCPPGFHG 172
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 15/99 (15%)
Query: 29 TCRQGTTGCSVQN-------GGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMGCAY 81
TC QG TG + QN C C +T+ + C C G G ++ +
Sbjct: 1046 TCPQGYTGLNCQNLVRWCDSAPCKNGGRCWQTN----TQYHCECRSGWTGVNCDVLSVSC 1101
Query: 82 GMSGNPCG---GVTCEHGGICAPIGDRGYRCQCEPGFTG 117
++ G + C+HGG+C GD+ Y C C+ G+TG
Sbjct: 1102 EVAAQKRGIDVTLLCQHGGLCVDEGDKHY-CHCQAGYTG 1139
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 44/113 (38%), Gaps = 15/113 (13%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCP 66
CI+ KC CP + G TC C+ C C+E+ D SC CP
Sbjct: 806 CIDDVAGYKCN-CPLPYTG--ATCEVVLAPCAT--SPCKNSGVCKESED--YESFSCVCP 858
Query: 67 PGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
G G C + N C C HG C + YRC C+ G+TG +
Sbjct: 859 TGWQG-----QTCEVDI--NECVKSPCRHGASCQNT-NGSYRCLCQAGYTGRN 903
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMG 78
CP G+ +G C T C+ C TC D + S +C CPPG GS
Sbjct: 971 CPVGF--NGIHCENNTPDCT--ESSCFNGGTC---VDGINS-FTCLCPPGFTGS-----Y 1017
Query: 79 CAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
C Y + N C C HGG C Y+C C G+TG
Sbjct: 1018 CQYDV--NECDSRPCLHGGTCQD-SYGTYKCTCPQGYTG 1053
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 62 SCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
+C+CP G G C + N C C +GG C + Y+C+C PG++G+S
Sbjct: 86 ACSCPLGFSGPL-----CLTPLD-NACLANPCRNGGTCDLLTLTEYKCRCPPGWSGKS 137
>sp|Q61982|NOTC3_MOUSE Neurogenic locus notch homolog protein 3 OS=Mus musculus GN=Notch3
PE=1 SV=1
Length = 2318
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 22/115 (19%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCS---VQNGGCHPLATCRETSDTVRSVISC 63
C+NT G +C QCP G+ G C C+ +NGG TCR++SD C
Sbjct: 175 CLNTPGSFRC-QCPLGYTG--LLCENPVVPCAPSPCRNGG-----TCRQSSDVT---YDC 223
Query: 64 TCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
C PG G + + + C G C +GG C G Y CQC P +TG+
Sbjct: 224 ACLPGFEGQNCEV-------NVDDCPGHRCLNGGTCV-DGVNTYNCQCPPEWTGQ 270
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 19/105 (18%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQ---NGGCHPLATCRETSDTVRSVISCTCPPGMGGS-- 72
+CP G+ GD +C C+ Q NGG D V + C+CPPG G
Sbjct: 1110 ECPAGYAGD--SCEDNIDECASQPCQNGG--------SCIDLVARYL-CSCPPGTLGVLC 1158
Query: 73 GVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
+ C G S + GV C H G C + G+RC C PG+TG
Sbjct: 1159 EINEDDCDLGPSLD--SGVQCLHNGTCVDLVG-GFRCNCPPGYTG 1200
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 41/99 (41%), Gaps = 14/99 (14%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMG 78
C GW G C Q + ++ C TC TSD + CTC PG G ++
Sbjct: 721 CEPGW--SGPRCSQSLAPDACESQPCQAGGTC--TSDGIG--FRCTCAPGFQGHQCEVL- 773
Query: 79 CAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
+PC CEHGG C DR C C PG+ G
Sbjct: 774 -------SPCTPSLCEHGGHCESDPDRLTVCSCPPGWQG 805
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 59 SVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
S SC C PG G+ C Y +PC C HGGIC P G+ C C GFTG
Sbjct: 945 SSFSCLCRPGYTGTH-----CQY--EADPCFSRPCLHGGICNPT-HPGFECTCREGFTG 995
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 19 CPHGWVG-----DGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSG 73
CP G+ G D CR GTT ++GG TC T + R C CP
Sbjct: 147 CPPGYQGQSCQSDIDECRSGTT---CRHGG-----TCLNTPGSFR----CQCP------- 187
Query: 74 VGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
+G G PC C +GG C D Y C C PGF G++
Sbjct: 188 LGYTGLLCENPVVPCAPSPCRNGGTCRQSSDVTYDCACLPGFEGQN 233
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 63 CTCPPGMGGSGVGL-MGCAYGMSGNPCGGVTCEHGGICAPIGD-RGYRCQCEPGFTG 117
C CPPG+ G + G + C C HGG C P+ +RC C PG+ G
Sbjct: 1314 CACPPGLSGPSCRVSRASPSGATNASCASAPCLHGGSCLPVQSVPFFRCVCAPGWGG 1370
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 61 ISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
SCTCP G GS L + C C +G C D GY C+C GF G
Sbjct: 492 FSCTCPSGFSGSMCQL-------DVDECASTPCRNGAKCVDQPD-GYECRCAEGFEG 540
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 44 CHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIG 103
CH A C + R++ CTCPPG G C + G CEH G C +
Sbjct: 361 CHEDAICDTNPVSGRAI--CTCPPGFTGG-----ACDQDVDECSIGANPCEHLGRC--VN 411
Query: 104 DRG-YRCQCEPGFTG 117
+G + CQC G+TG
Sbjct: 412 TQGSFLCQCGRGYTG 426
>sp|P07207|NOTCH_DROME Neurogenic locus Notch protein OS=Drosophila melanogaster GN=N PE=1
SV=3
Length = 2703
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 40/100 (40%), Gaps = 11/100 (11%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMG 78
C +VGD R QNGG TC+ T R ISC CP G S +
Sbjct: 85 CDSHYVGDYCEHRNPCNSMRCQNGG-----TCQVTFRNGRPGISCKCPLGFDESLCEIA- 138
Query: 79 CAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
N C VTC +GG C Y C C G+TGE
Sbjct: 139 -----VPNACDHVTCLNGGTCQLKTLEEYTCACANGYTGE 173
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 46/115 (40%), Gaps = 23/115 (20%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCS---VQNGGCHPLATCRETSDTVRSVISC 63
C+NT G +C CP G+ G C CS QNGG CR + C
Sbjct: 232 CVNTHGSYQC-MCPTGYTG--KDCDTKYKPCSPSPCQNGG-----ICRSNGLSYE----C 279
Query: 64 TCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
CP G G + + C G C++GG C G Y C+C P FTG
Sbjct: 280 KCPKGFEGKNCE-------QNYDDCLGHLCQNGGTCID-GISDYTCRCPPNFTGR 326
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query: 54 SDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEP 113
D + I C CPPG G L + C C+HGG C + + CQC P
Sbjct: 769 EDGINEFI-CHCPPGYTGKRCEL-------DIDECSSNPCQHGGTCYDKLN-AFSCQCMP 819
Query: 114 GFTGES 119
G+TG+
Sbjct: 820 GYTGQK 825
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 16/101 (15%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMG 78
CP G+ GD TC C Q+ C TC T + + C CP G G
Sbjct: 205 CPPGFTGD--TCSYDIEEC--QSNPCKYGGTCVNTHGSYQ----CMCPTGYTGKDCD--- 253
Query: 79 CAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
PC C++GGIC G Y C+C GF G++
Sbjct: 254 ----TKYKPCSPSPCQNGGICRSNG-LSYECKCPKGFEGKN 289
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 45/106 (42%), Gaps = 28/106 (26%)
Query: 18 QCPHGWVGDGTTCRQGTTGCS---VQNGG-CHPLATCRETSDTVRSVISCTCPPGMGGSG 73
QC G+ G C C+ QNGG CH D V + SC+CPPG
Sbjct: 1208 QCRQGF--QGQNCELNIDDCAPNPCQNGGTCH---------DRVMN-FSCSCPPGT---- 1251
Query: 74 VGLMGCAYGMSGNPCGGVTCEHGGICAPIGDR--GYRCQCEPGFTG 117
MG ++ + C C + G C DR G+ C C+PGF G
Sbjct: 1252 ---MGIICEINKDDCKPGACHNNGSCI---DRVGGFECVCQPGFVG 1291
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 10/62 (16%)
Query: 59 SVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRG-YRCQCEPGFTG 117
S +C+CPPG G C+Y + C C++GG C + G Y+C C G+TG
Sbjct: 199 SSFTCSCPPGFTGD-----TCSYDIE--ECQSNPCKYGGTC--VNTHGSYQCMCPTGYTG 249
Query: 118 ES 119
+
Sbjct: 250 KD 251
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 86 NPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
N C C +G C G Y+CQC PGFTG+
Sbjct: 679 NECHSNPCNNGATCID-GINSYKCQCVPGFTGQ 710
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 15/59 (25%)
Query: 62 SCTCPPGMGGSG--VGLMGCAYGMSGNPCGGVTCEHGGICAPIGD-RGYRCQCEPGFTG 117
SC CPPG G+ + + C NPC H G C I D ++C C+PG+TG
Sbjct: 587 SCECPPGYTGTSCEININDC----DSNPC------HRGKC--IDDVNSFKCLCDPGYTG 633
>sp|Q8R4U0|STAB2_MOUSE Stabilin-2 OS=Mus musculus GN=Stab2 PE=1 SV=1
Length = 2559
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
+C G+ G+GT C C + NGGC A C+ T R C C G G G+
Sbjct: 1464 KCAAGFQGNGTVC-TAINACEISNGGCSAKADCKRTIPGSR---VCVCKAGYTGDGI--- 1516
Query: 78 GCAYGMSGNPC----GGVTCEHGGICAPIGDRGYRCQCEPGFTGESEL 121
+ NPC GG C+ C G C C P +TG+ ++
Sbjct: 1517 ---VCLEINPCLENHGG--CDRHAECTQTGPNQAVCNCLPKYTGDGKV 1559
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 4 YVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISC 63
+ EC T + C + GDG C C NGGC P A C T R +C
Sbjct: 1534 HAECTQTGPNQAVCNCLPKYTGDGKVCTLINV-CLTNNGGCSPFAFCNHTEQDQR---TC 1589
Query: 64 TCPPGMGGSGV 74
TC P G G+
Sbjct: 1590 TCKPDYTGDGI 1600
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 45/113 (39%), Gaps = 13/113 (11%)
Query: 19 CPHGWVGDGTTCRQGTTGC-SVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSG---V 74
C G+ GDGT C + S GGC P A C + S SC C G G+G V
Sbjct: 861 CNDGYEGDGTLCSKKDPCLGSTSRGGCSPNAECIQAS---TGTYSCVCQRGWTGNGRDCV 917
Query: 75 GLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGESELLVPLLS 127
+ C SG C C +G C+C+ GF G P++S
Sbjct: 918 EINSCLLPSSGG------CHDNATCLYVGPGQNECECKKGFRGNGIDCEPIIS 964
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSG---VG 75
C + GDG TC C NGGC +A C + + +SC+C G G G
Sbjct: 2077 CNLNYEGDGITCTV-VDFCKQNNGGCAKVAKCSQKG----TQVSCSCQKGYKGDGHSCTE 2131
Query: 76 LMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
+ CA G++G C C G +C+C+ + G+
Sbjct: 2132 IDPCANGVNGG------CHEHATCRMTGPGKQKCECKSHYVGD 2168
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 2 TPYVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVI 61
+P ECI C GW G+G C + + +GGCH ATC
Sbjct: 888 SPNAECIQASTGTYSCVCQRGWTGNGRDCVEINSCLLPSSGGCHDNATCLYVGPGQN--- 944
Query: 62 SCTCPPGMGGSGV 74
C C G G+G+
Sbjct: 945 ECECKKGFRGNGI 957
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 45/119 (37%), Gaps = 27/119 (22%)
Query: 17 GQCPHGWVGDGT----TCRQGTTG--CSVQNGGC-------HPLATCRETSDTVRSVISC 63
G C + DG+ TCR+GT G C Q C H ATC +++T SC
Sbjct: 804 GICDNRLDSDGSCLPGTCREGTAGRFCDKQTSACGPYMQFCHIHATCEYSNETA----SC 859
Query: 64 TCPPGMGGSGVGLMGCAYGMSGNPCGGVT----CEHGGICAPIGDRGYRCQCEPGFTGE 118
C G G G +PC G T C C Y C C+ G+TG
Sbjct: 860 VCNDGYEGDGT------LCSKKDPCLGSTSRGGCSPNAECIQASTGTYSCVCQRGWTGN 912
>sp|Q61483|DLL1_MOUSE Delta-like protein 1 OS=Mus musculus GN=Dll1 PE=1 SV=2
Length = 722
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 43/96 (44%), Gaps = 18/96 (18%)
Query: 29 TCRQGTTG--CSVQNGGCHPL-----ATCRETSDTVRSVISCTCPPGMGGSGVGLMGCAY 81
+CR G TG C ++ C P A+C + D+ SCTCPPG G L
Sbjct: 314 SCRPGYTGANCELEVDECAPSPCKNGASCTDLEDS----FSCTCPPGFYGKVCEL----- 364
Query: 82 GMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
S C C +GG C+ D GY C C GF+G
Sbjct: 365 --SAMTCADGPCFNGGRCSDNPDGGYTCHCPLGFSG 398
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 49 TCRETSDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYR 108
TCR++ + SCTCPPG G C+ +S C C +G C G R Y
Sbjct: 456 TCRDSVND----FSCTCPPGYTGK-----NCSAPVSR--CEHAPCHNGATCHQRGQR-YM 503
Query: 109 CQCEPGFTGES-ELLVP 124
C+C G+ G + + L+P
Sbjct: 504 CECAQGYGGPNCQFLLP 520
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
C GW G C Q C+ + C ATC ++T + +C+C PG G+ L
Sbjct: 274 NCQEGW--GGLFCNQDLNYCT-HHKPCRNGATC---TNTGQGSYTCSCRPGYTGANCEL- 326
Query: 78 GCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
+ C C++G C + D + C C PGF G+
Sbjct: 327 ------EVDECAPSPCKNGASCTDLED-SFSCTCPPGFYGK 360
>sp|Q8CFM6|STAB2_RAT Stabilin-2 (Fragment) OS=Rattus norvegicus GN=Stab2 PE=1 SV=1
Length = 1431
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
+C G+ G+GT C C NGGC A C+ T+ R C C G G G+
Sbjct: 321 KCAAGFRGNGTVC-TAINACETSNGGCSTKADCKRTTPGNR---VCVCKAGYTGDGI--- 373
Query: 78 GCAYGMSGNPC----GGVTCEHGGICAPIGDRGYRCQCEPGFTGESEL 121
+ NPC GG C+ C G C C P +TG+ ++
Sbjct: 374 ---VCLEINPCLENHGG--CDRNAECTQTGPNQAVCNCLPKYTGDGKV 416
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
Query: 5 VECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCT 64
EC T + C + GDG C C NGGC P A C T R CT
Sbjct: 392 AECTQTGPNQAVCNCLPKYTGDGKVCSLINV-CLTNNGGCSPFAFCNYTEQDQR---ICT 447
Query: 65 CPPGMGGSGVGLMGCAYG-MSGNP 87
C P G G+ G YG + NP
Sbjct: 448 CKPDYTGDGIVCRGSIYGELPKNP 471
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSG---VG 75
C + GDG TC C NGGC +A C + + +SC+C G G G +
Sbjct: 934 CNLNYEGDGITCTV-VDFCKQNNGGCAKVAKCSQKG----TQVSCSCKKGYKGDGYSCIE 988
Query: 76 LMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
+ CA G++G C C G ++C+C+ + G+
Sbjct: 989 IDPCADGVNGG------CHEHATCRMTGPGKHKCECKSHYVGD 1025
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 12 GYRKCGQCPHGWVGDGTTC---RQGTTGCSVQNGGCHPLATCRET--SDTVRSVISCTCP 66
G KC +C +VGDG C + C NG CHP A+C + DT V P
Sbjct: 1012 GKHKC-ECKSHYVGDGVDCEPEQLPLDRCLQDNGQCHPDASCADLYFQDTTVGVFHLRSP 1070
Query: 67 PG 68
G
Sbjct: 1071 LG 1072
>sp|P14585|LIN12_CAEEL Protein lin-12 OS=Caenorhabditis elegans GN=lin-12 PE=1 SV=1
Length = 1429
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 58 RSVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
R SC CPPG G+G C TC++GG+C ++G +C+C GF+G
Sbjct: 562 RESFSCDCPPGFYGNGCEQEKMFR------CLKSTCQNGGVCINEEEKGRKCECSYGFSG 615
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 27 GTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGN 86
G+ C++G C N C + C + V S C CPP G M C S
Sbjct: 281 GSYCQEGKDNCV--NNKCEAGSKC---INGVNSYF-CDCPPERTGPYCEKMDC----SAI 330
Query: 87 PCGGVTCEHGG-ICAPIGDRGYRCQCEPGFTG 117
P C HG I +P+ ++ + CQCEPG+ G
Sbjct: 331 P---DICNHGTCIDSPLSEKAFECQCEPGYEG 359
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 18/121 (14%)
Query: 7 CINTQGYRKCGQCPHGWV-------GDGTTCRQGTTGCSVQNGGCHP---LATCRETSDT 56
C+NT G C CP G++ G+ +T C ++ HP C+
Sbjct: 169 CMNTLGTYIC-VCPQGFLPPDCLKPGNTSTVEFKQPVCFLEISADHPDGRSMYCQNGGFC 227
Query: 57 VRSVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFT 116
++ C CPPG GS L+ + NPC G+C G++C C+ G++
Sbjct: 228 DKASSKCQCPPGYHGSTCELLEKEDSCASNPCS------HGVCISFSG-GFQCICDDGYS 280
Query: 117 G 117
G
Sbjct: 281 G 281
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 39/101 (38%), Gaps = 14/101 (13%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
QC G+ +G C Q C +N C TC + R C C G GG
Sbjct: 352 QCEPGY--EGILCEQDKNECLSENM-CLNNGTCVNLPGSFR----CDCARGFGGKW---- 400
Query: 78 GCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
C + N C CE+ G C D CQC+ GF G+
Sbjct: 401 -CDEPL--NMCQDFHCENDGTCMHTSDHSPVCQCKNGFIGK 438
>sp|P46531|NOTC1_HUMAN Neurogenic locus notch homolog protein 1 OS=Homo sapiens GN=NOTCH1
PE=1 SV=4
Length = 2555
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 27 GTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGN 86
G TCRQ C + G C TC + R V T G
Sbjct: 172 GPTCRQDVNECGQKPGLCRHGGTCHNEVGSYRCVCRAT-----------HTGPNCERPYV 220
Query: 87 PCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
PC C++GG C P GD + C C PGFTG++
Sbjct: 221 PCSPSPCQNGGTCRPTGDVTHECACLPGFTGQN 253
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 9/56 (16%)
Query: 62 SCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
C CPPG G +PC C +GG C P + Y C C P F G
Sbjct: 126 KCRCPPGWSGKSC--------QQADPCASNPCANGGQCLPF-EASYICHCPPSFHG 172
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMG 78
CP G+ G C T C+ C TC D + S +C CPPG GS
Sbjct: 971 CPAGF--SGIHCENNTPDCT--ESSCFNGGTC---VDGINS-FTCLCPPGFTGSY----- 1017
Query: 79 CAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
C + + N C C HGG C G YRC C G+TG
Sbjct: 1018 CQHDV--NECDSQPCLHGGTCQD-GCGSYRCTCPQGYTG 1053
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 79 CAYGMSG--------NPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
CA G SG N C C +GG C + Y+C+C PG++G+S
Sbjct: 89 CALGFSGPLCLTPLDNACLTNPCRNGGTCDLLTLTEYKCRCPPGWSGKS 137
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 10/70 (14%)
Query: 50 CRETSDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRC 109
CR++ D SC CP G G C + N C C HG C GYRC
Sbjct: 844 CRQSED--YESFSCVCPTGWQG-----QTCEVDI--NECVLSPCRHGASCQNTHG-GYRC 893
Query: 110 QCEPGFTGES 119
C+ G++G +
Sbjct: 894 HCQAGYSGRN 903
>sp|Q61554|FBN1_MOUSE Fibrillin-1 OS=Mus musculus GN=Fbn1 PE=1 SV=1
Length = 2871
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 51/120 (42%), Gaps = 18/120 (15%)
Query: 4 YVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISC 63
+ C NT G KC C GW+GDG C CS C A C+ T + R C
Sbjct: 1336 HAVCTNTAGSFKCS-CSPGWIGDGIKCTD-LDECSNGTHMCSQHADCKNTMGSYR----C 1389
Query: 64 TCPPGMGGSGV---GLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGESE 120
C G G G L C+ + N CG C + AP GYRC+C+ GF ++
Sbjct: 1390 LCKDGYTGDGFTCTDLDECSENL--NLCGNGQCLN----AP---GGYRCECDMGFVPSAD 1440
>sp|P35555|FBN1_HUMAN Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3
Length = 2871
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 51/120 (42%), Gaps = 18/120 (15%)
Query: 4 YVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISC 63
+ C NT G KC C GW+GDG C CS C A C+ T + R C
Sbjct: 1336 HAVCTNTAGSFKCS-CSPGWIGDGIKCTD-LDECSNGTHMCSQHADCKNTMGSYR----C 1389
Query: 64 TCPPGMGGSGV---GLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGESE 120
C G G G L C+ + N CG C + AP GYRC+C+ GF ++
Sbjct: 1390 LCKEGYTGDGFTCTDLDECSENL--NLCGNGQCLN----AP---GGYRCECDMGFVPSAD 1440
>sp|Q06441|TSP4_XENLA Thrombospondin-4 OS=Xenopus laevis GN=thbs4 PE=2 SV=1
Length = 955
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCP 66
CINT G +CG C G+VGD + C CH A C E D ++CTC
Sbjct: 392 CINTMGSFRCGGCKPGYVGDQIKGCKPEKSCRHGQNPCHASAQCSEEKD---GDVTCTCS 448
Query: 67 PGMGGSGVGLMGCAYGMSGNPCGGVTC 93
G G+G L G + G P + C
Sbjct: 449 VGWAGNGY-LCGKDTDIDGYPDEALPC 474
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 5 VECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCT 64
V CI+T+G +CG CP G+ G+G C C + C C TS + +
Sbjct: 294 VRCIDTEGGFQCGPCPEGYTGNGVICTD-VDECRL--NPCFLGVRCINTSPGFKCE---S 347
Query: 65 CPPGMGGSGVGLMGCAYGMSG 85
CPPG GS + +G +
Sbjct: 348 CPPGYTGSTIQGIGINFAKQN 368
>sp|P98133|FBN1_BOVIN Fibrillin-1 OS=Bos taurus GN=FBN1 PE=1 SV=1
Length = 2871
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 51/120 (42%), Gaps = 18/120 (15%)
Query: 4 YVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISC 63
+ C NT G KC C GW+GDG C CS C A C+ T + R C
Sbjct: 1336 HAVCTNTAGSFKCS-CSPGWIGDGIKCTD-LDECSNGTHMCSQHADCKNTMGSYR----C 1389
Query: 64 TCPPGMGGSGV---GLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGESE 120
C G G G L C+ + N CG C + AP GYRC+C+ GF ++
Sbjct: 1390 LCKEGYTGDGFTCTDLDECSENL--NLCGNGQCLN----AP---GGYRCECDMGFVPSAD 1440
>sp|P97677|DLL1_RAT Delta-like protein 1 OS=Rattus norvegicus GN=Dll1 PE=2 SV=1
Length = 714
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 29 TCRQGTTG--CSVQNGGCHPLATCRE--TSDTVRSVISCTCPPGMGGSGVGLMGCAYGMS 84
+CR G TG C ++ C P + CR + + SCTCPPG G L S
Sbjct: 314 SCRPGYTGANCELEVDECAP-SPCRNGGSCTDLEDSYSCTCPPGFYGKVCEL-------S 365
Query: 85 GNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
C C +GG C+ D GY C C GF+G
Sbjct: 366 AMTCADGPCFNGGRCSDNPDGGYTCHCPAGFSG 398
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
C GW G C Q C+ + C ATC ++T + +C+C PG G+ L
Sbjct: 274 NCQEGW--GGLFCNQDLNYCT-HHKPCRNGATC---TNTGQGSYTCSCRPGYTGANCEL- 326
Query: 78 GCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
+ C C +GG C + D Y C C PGF G+
Sbjct: 327 ------EVDECAPSPCRNGGSCTDLED-SYSCTCPPGFYGK 360
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 49 TCRETSDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYR 108
TCR++ + SCTCPPG G C+ +S C C +G C G R Y
Sbjct: 456 TCRDSVND----FSCTCPPGYTG-----RNCSAPVSR--CEHAPCHNGATCHQRGQR-YM 503
Query: 109 CQCEPGFTGES-ELLVP 124
C+C G+ G + + L+P
Sbjct: 504 CECAQGYGGANCQFLLP 520
>sp|G5EFX6|SLIT1_CAEEL Slit homolog 1 protein OS=Caenorhabditis elegans GN=slt-1 PE=3 SV=1
Length = 1410
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 15/123 (12%)
Query: 6 ECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTC 65
+C++ +C CP + +G C C+ + C C + SC C
Sbjct: 961 KCVDLINSYRC-DCPMEY--EGKHCEDKLEYCTKKLNPCENNGKCI----PINGSYSCMC 1013
Query: 66 PPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGESELLVPL 125
PG G+ C + + C V C++GG C G Y C C PG+ G+ + P+
Sbjct: 1014 SPGFTGNN-----CETNI--DDCKNVECQNGGSCVD-GILSYDCLCRPGYAGQYCEIPPM 1065
Query: 126 LSV 128
+ +
Sbjct: 1066 MDM 1068
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 44/115 (38%), Gaps = 18/115 (15%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCP 66
C Q R C G+ GD C + C N C C + ++ R C CP
Sbjct: 923 CKVAQAGRFNCYCNKGFEGD--YCEKNIDDCV--NSKCENGGKCVDLINSYR----CDCP 974
Query: 67 PGMGGSGV--GLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
G L C + NPC E+ G C PI + Y C C PGFTG +
Sbjct: 975 MEYEGKHCEDKLEYCTKKL--NPC-----ENNGKCIPI-NGSYSCMCSPGFTGNN 1021
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 88 CGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
C C++ IC R Y C C PGF G
Sbjct: 873 CLNSPCKNNAICETTSSRKYTCNCTPGFYG 902
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 44/119 (36%), Gaps = 17/119 (14%)
Query: 6 ECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVIS--C 63
+CI G C C G+ G+ C C +N C +C V ++S C
Sbjct: 1001 KCIPINGSYSC-MCSPGFTGN--NCETNIDDC--KNVECQNGGSC------VDGILSYDC 1049
Query: 64 TCPPGMGGSGVG---LMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
C PG G +M Y + + C C G A + C+C GF+G S
Sbjct: 1050 LCRPGYAGQYCEIPPMMDMEYQKT-DACQQSACGQGECVASQNSSDFTCKCHEGFSGPS 1107
Score = 28.9 bits (63), Expect = 9.8, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 86 NPCGGVTCEHGGICA-PIGDRGYRCQCEPGFTGE 118
N C G+ C +G + +GY CQC+ F+GE
Sbjct: 1290 NFCAGIDCGNGKCTNNALSPKGYMCQCDSHFSGE 1323
>sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditis elegans GN=lam-2 PE=1
SV=3
Length = 1633
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 22/126 (17%)
Query: 6 ECI-NTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTV-----RS 59
+CI NT G+ C C G+ GD +G + Q+ GC T R +D +
Sbjct: 858 KCIFNTHGF-NCENCKPGYWGDALIEPKG----NCQSCGCFAAGTRRPNNDYTLLECNQQ 912
Query: 60 VISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGY-------RCQCE 112
C C P + G+ CA+G N G+ C+ C P+G G +CQC+
Sbjct: 913 DGQCDCLPNV--IGIQCDQCAHGFY-NITSGLGCQECN-CDPLGSEGNTCDVNTGQCQCK 968
Query: 113 PGFTGE 118
PG TG+
Sbjct: 969 PGVTGQ 974
>sp|P35441|TSP1_MOUSE Thrombospondin-1 OS=Mus musculus GN=Thbs1 PE=1 SV=1
Length = 1170
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 45/119 (37%), Gaps = 13/119 (10%)
Query: 11 QGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMG 70
G KCG CP G+ G+G C+ C C +T CPP
Sbjct: 567 DGSWKCGACPPGYSGNGIQCKD-VDECKEVPDACFNHNGEHRCKNTDPGYNCLPCPPRFT 625
Query: 71 GSGVGLMGCAYGMSG-------NPC--GGVTCEHGGICAPIG---DRGYRCQCEPGFTG 117
GS G + M+ NPC G C C +G D YRC+C+PG+ G
Sbjct: 626 GSQPFGRGVEHAMANKQVCKPRNPCTDGTHDCNKNAKCNYLGHYSDPMYRCECKPGYAG 684
>sp|P49747|COMP_HUMAN Cartilage oligomeric matrix protein OS=Homo sapiens GN=COMP PE=1
SV=2
Length = 757
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 3 PYVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVIS 62
P V CI T+ +CG CP G+ G+G+ C C+ C P C TS R
Sbjct: 98 PGVACIQTESGARCGPCPAGFTGNGSHC-TDVNECNAH--PCFPRVRCINTSPGFRCE-- 152
Query: 63 CTCPPGMGGSGVGLMGCAYGMSGNP-CGGVT-CEHGG-ICAP----IGDRG-YRC-QCEP 113
CPPG G +G A+ + C + CE G C P I RG ++C C+P
Sbjct: 153 -ACPPGYSGPTHQGVGLAFAKANKQVCTDINECETGQHNCVPNSVCINTRGSFQCGPCQP 211
Query: 114 GFTGES 119
GF G+
Sbjct: 212 GFVGDQ 217
>sp|P46530|NOTC1_DANRE Neurogenic locus notch homolog protein 1 OS=Danio rerio GN=notch1a
PE=2 SV=1
Length = 2437
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
Query: 27 GTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGN 86
G TCRQ C+V C TC + V S + C CPP G +
Sbjct: 171 GQTCRQDVNECAVSPSPCRNGGTC---INEVGSYL-CRCPPEYTGPHCQRLY-------Q 219
Query: 87 PCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
PC C GG C D + C C PGFTG++
Sbjct: 220 PCLPSPCRSGGTCVQTSDTTHTCSCLPGFTGQT 252
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Query: 49 TCRETSDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYR 108
CRE+ D SC CP G G C + N C C +GG+C + G++
Sbjct: 841 VCRESEDF--QSFSCNCPAGWQG-----QTCEVDI--NECVRNPCTNGGVCENLRG-GFQ 890
Query: 109 CQCEPGFTG 117
C+C PGFTG
Sbjct: 891 CRCNPGFTG 899
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 64 TCPPGMGGSGVGLM-GCAYGMS--------GNPCGGVTCEHGGICAPIGDRGYRCQCEPG 114
C P M G+ VG+ C G S + C C +GG C+ + + C+C+PG
Sbjct: 72 VCRPQMQGNEVGVKCDCVLGFSDRLCLTPVNHACMNSPCRNGGTCSLLTLDTFTCRCQPG 131
Query: 115 FTGES-ELLVPLLS 127
++G++ +L P S
Sbjct: 132 WSGKTCQLADPCAS 145
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 21 HGWVGDGTTCRQGTTG--CSVQNGGCHPLATCRETSDTVRSVIS--CTCPPGMGGSGVGL 76
HG++ C+ G +G C + C L CR + V +S C C PG G
Sbjct: 1328 HGYI---CKCQPGYSGSSCEYDSQSCGSL-RCRNGATCVSGHLSPRCLCAPGFSGHE--- 1380
Query: 77 MGCAYGMSGNPCGGVTCEHGGICAPIGDR-GYRCQCEPGFTG 117
C M +PC C +GG C PI D YRC C F G
Sbjct: 1381 --CQTRMD-SPCLVNPCYNGGTCQPISDAPFYRCSCPANFNG 1419
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 86 NPCGGVTCEHGGICAPIGD--RGYRCQCEPGFTGES 119
N C C++GG CA + GY C+C+PG++G S
Sbjct: 1307 NGCKDTPCKNGGTCAVASNTKHGYICKCQPGYSGSS 1342
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 52/141 (36%), Gaps = 38/141 (26%)
Query: 6 ECINTQGYRKCGQCPHGWVG-----DGTTCR----QGTTGCSVQNGGCHPL-------AT 49
C+NT+G +C +C G+ G D C+ Q C Q GG H +
Sbjct: 427 RCLNTKGSFQC-KCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPGYEGVF 485
Query: 50 CRETSDTVRS-------------VISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHG 96
C+ SD S C CP G GS + + C C++G
Sbjct: 486 CQINSDDCASQPCLNGKCIDKINSFHCECPKGFSGSLCQV-------DVDECASTPCKNG 538
Query: 97 GICAPIGDRGYRCQCEPGFTG 117
C G Y C+C PGF+G
Sbjct: 539 AKCTD-GPNKYTCECTPGFSG 558
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 63 CTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRG-YRCQCEPGFTG 117
CTCPPG GS C + G CEHGG C + +G ++C+C G+ G
Sbjct: 397 CTCPPGYTGS-----ACNQDIDECSLGANPCEHGGRC--LNTKGSFQCKCLQGYEG 445
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
Query: 59 SVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
+C C PG G L +PC C +GG C+ + Y C C P F G+
Sbjct: 122 DTFTCRCQPGWSGKTCQL--------ADPCASNPCANGGQCSAF-ESHYICTCPPNFHGQ 172
Query: 119 S 119
+
Sbjct: 173 T 173
>sp|Q9UM47|NOTC3_HUMAN Neurogenic locus notch homolog protein 3 OS=Homo sapiens GN=NOTCH3
PE=1 SV=2
Length = 2321
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSV---QNGGCHPLATCRETSDTVRSVISC 63
C+NT G +C QCP G+ G C C+ +NGG TCR++ D C
Sbjct: 174 CLNTPGSFRC-QCPAGYTG--PLCENPAVPCAPSPCRNGG-----TCRQSGDLT---YDC 222
Query: 64 TCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
C PG G + + + C G C +GG C G Y CQC P +TG+
Sbjct: 223 ACLPGFEGQNCEV-------NVDDCPGHRCLNGGTCV-DGVNTYNCQCPPEWTGQ 269
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 13/101 (12%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMG 78
CP GWVG+ +G C C+ + + SC CP G G L
Sbjct: 67 CPPGWVGERCQLED-----PCHSGPCAGRGVCQSSVVAGTARFSCRCPRGFRGPDCSLP- 120
Query: 79 CAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
+PC C HG C+ D + C C PG+ G S
Sbjct: 121 -------DPCLSSPCAHGARCSVGPDGRFLCSCPPGYQGRS 154
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 39/101 (38%), Gaps = 14/101 (13%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMG 78
CP G+ G +CR C V C TC T + R C CP G G
Sbjct: 146 CPPGY--QGRSCRSDVDECRVGEP-CRHGGTCLNTPGSFR----CQCP-------AGYTG 191
Query: 79 CAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
PC C +GG C GD Y C C PGF G++
Sbjct: 192 PLCENPAVPCAPSPCRNGGTCRQSGDLTYDCACLPGFEGQN 232
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 63 CTCPPGMGG-SGVGLMGCAYGMSGNPCGGVTCEHGGICAPIG-DRGYRCQCEPGFTG--- 117
C CPPG+ G S G G S C C HGG C P +RC C G+TG
Sbjct: 1313 CACPPGLSGPSCRSFPGSPPGASNASCAAAPCLHGGSCRPAPLAPFFRCACAQGWTGPRC 1372
Query: 118 ESELLVPLLS 127
E+ P +S
Sbjct: 1373 EAPAAAPEVS 1382
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 54 SDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEP 113
+D V S +CTCPPG GG C + C +C +GG C G + C C P
Sbjct: 902 TDHVAS-FTCTCPPGYGG-----FHCEQDLPD--CSPSSCFNGGTCV-DGVNSFSCLCRP 952
Query: 114 GFTG 117
G+TG
Sbjct: 953 GYTG 956
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 61 ISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
SCTCP G GS L + C C +G C D GY C+C GF G
Sbjct: 491 FSCTCPSGFSGSTCQL-------DVDECASTPCRNGAKCVDQPD-GYECRCAEGFEG 539
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 15/111 (13%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCP 66
C + G +C C GW G C Q + ++ C TC +SD + CTCP
Sbjct: 709 CYDAPGGFRC-VCEPGW--SGPRCSQSLARDACESQPCRAGGTC--SSDGMG--FHCTCP 761
Query: 67 PGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
PG+ G L+ +PC CEHGG C + C C G+ G
Sbjct: 762 PGVQGRQCELL--------SPCTPNPCEHGGRCESAPGQLPVCSCPQGWQG 804
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Query: 61 ISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
SC C PG G+ C + +PC C HGG+C+ G+RC C FTG
Sbjct: 946 FSCLCRPGYTGAH-----CQH--EADPCLSRPCLHGGVCS-AAHPGFRCTCLESFTG 994
>sp|Q75N90|FBN3_HUMAN Fibrillin-3 OS=Homo sapiens GN=FBN3 PE=2 SV=3
Length = 2809
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 45/115 (39%), Gaps = 18/115 (15%)
Query: 4 YVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISC 63
+ C+N G C +C GWVGDG C C Q C P C + R C
Sbjct: 1294 HASCLNIPGSFSC-RCLPGWVGDGFECHD-LDECVSQEHRCSPRGDCLNVPGSYR----C 1347
Query: 64 TCPPGMGGSGV---GLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGF 115
TC G G G CA + C++G G GYRC+CE GF
Sbjct: 1348 TCRQGFAGDGFFCEDRDECAENVD-------LCDNGQCLNAPG--GYRCECEMGF 1393
>sp|Q6DI48|DLLA_DANRE Delta-like protein A OS=Danio rerio GN=dla PE=1 SV=1
Length = 772
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 57 VRSVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFT 116
+ + SCTCPPG G L S C C +GG CA D GY CQC G+
Sbjct: 348 MENTYSCTCPPGFYGKNCEL-------SAMTCADGPCFNGGRCADNPDGGYFCQCPTGYA 400
Query: 117 G 117
G
Sbjct: 401 G 401
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 16/102 (15%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
QCP G+ G C + CS P + D V S + C CP G G M
Sbjct: 394 QCPTGYAG--FNCEKKIDHCSSS-----PCSNGARCVDLVNSYL-CQCPDGFTG-----M 440
Query: 78 GCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
C +G+ C C++GG C G GY C C PG+TG +
Sbjct: 441 NC--DRAGDECSMYPCQNGGTCQE-GASGYMCTCPPGYTGRN 479
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 14/102 (13%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
C GW G C Q C+ + C ATC S+T + +C+C PG G+ +
Sbjct: 277 NCQEGW--GGLFCNQDLNYCT-HHKPCLNGATC---SNTGQGSYTCSCRPGFSGASCEI- 329
Query: 78 GCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
N C G C +GG C + + Y C C PGF G++
Sbjct: 330 ------EVNECTGNPCRNGGSCTDM-ENTYSCTCPPGFYGKN 364
>sp|Q8UWJ4|DLLD_DANRE Delta-like protein D OS=Danio rerio GN=dld PE=1 SV=2
Length = 717
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 23/111 (20%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSV---QNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGV 74
QCP G+ G T C C+ QNGG TC++ S +CTCPPG G
Sbjct: 428 QCPEGFTG--THCEDNIDECATYPCQNGG-----TCQDG----LSDYTCTCPPGYTGKN- 475
Query: 75 GLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES-ELLVP 124
C + N C C +G C + +R Y C C PG+ G + + L+P
Sbjct: 476 ----CTSAV--NKCLHNPCHNGATCHEMDNR-YVCACIPGYGGRNCQFLLP 519
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 29 TCRQGTTG--CSVQNGGCHPLATCRE--TSDTVRSVISCTCPPGMGGSGVGLMGCAYGMS 84
+CR G TG C ++ C + CR + + + SCTCPPG G L S
Sbjct: 313 SCRPGFTGDSCEIEVNECSG-SPCRNGGSCTDLENTYSCTCPPGFYGRNCEL-------S 364
Query: 85 GNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
C C +GG CA + GY CQC G+ G
Sbjct: 365 AMTCADGPCFNGGHCADNPEGGYFCQCPMGYAG 397
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
C GW G C Q C+ + C ATC ++T + +C+C PG G +
Sbjct: 273 NCQEGW--GGLFCNQDLNYCT-HHKPCQNGATC---TNTGQGSYTCSCRPGFTGDSCEI- 325
Query: 78 GCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
N C G C +GG C + + Y C C PGF G +
Sbjct: 326 ------EVNECSGSPCRNGGSCTDL-ENTYSCTCPPGFYGRN 360
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
QCP G+ G C + CS +P + + D V S + C CP G G+
Sbjct: 390 QCPMGYAG--FNCEKKIDHCSS-----NPCSNDAQCLDLVDSYL-CQCPEGFTGTH---- 437
Query: 78 GCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
C + + C C++GG C G Y C C PG+TG++
Sbjct: 438 -CEDNI--DECATYPCQNGGTCQD-GLSDYTCTCPPGYTGKN 475
>sp|O88279|SLIT1_RAT Slit homolog 1 protein OS=Rattus norvegicus GN=Slit1 PE=1 SV=1
Length = 1531
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 62 SCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
SC C G G+ +G PCGG+ C HG C RG C C PGF+GE
Sbjct: 1397 SCQCQDGYSGALCNQVGAV----AEPCGGLQCLHGH-CQASATRGAHCVCSPGFSGE 1448
>sp|Q28178|TSP1_BOVIN Thrombospondin-1 OS=Bos taurus GN=THBS1 PE=2 SV=2
Length = 1170
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 44/119 (36%), Gaps = 13/119 (10%)
Query: 11 QGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMG 70
G KCG CP G+ GDG C+ C C +T CPP
Sbjct: 567 DGSWKCGACPPGYSGDGVECKD-VDECKEVPDACFNHNGEHRCENTDPGYNCLPCPPRFT 625
Query: 71 GSGVGLMGCAYGMSG-------NPC--GGVTCEHGGICAPIG---DRGYRCQCEPGFTG 117
GS G + + NPC G C C +G D YRC+C+PG+ G
Sbjct: 626 GSQPFGRGVEHATANKQVCKPRNPCTDGTHDCNKNAKCNYLGHYSDPMYRCECKPGYAG 684
>sp|Q99466|NOTC4_HUMAN Neurogenic locus notch homolog protein 4 OS=Homo sapiens GN=NOTCH4
PE=1 SV=2
Length = 2003
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCP 66
C+NT G C CP G+ G + C C Q CHP +TC + + + C CP
Sbjct: 452 CLNTPGSFNC-LCPPGYTG--SRCEADHNECLSQP--CHPGSTCLD----LLATFHCLCP 502
Query: 67 PGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
PG+ G + N C C + C + + G++C C PGF+G
Sbjct: 503 PGLEGQ-------LCEVETNECASAPCLNHADCHDLLN-GFQCICLPGFSG 545
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 63 CTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
C CPPG GS NPC C++G C GY CQC PG+ G++
Sbjct: 916 CHCPPGFQGS-------LCQDHVNPCESRPCQNGATCM-AQPSGYLCQCAPGYDGQN 964
>sp|Q9R172|NOTC3_RAT Neurogenic locus notch homolog protein 3 OS=Rattus norvegicus
GN=Notch3 PE=2 SV=2
Length = 2319
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 50/115 (43%), Gaps = 22/115 (19%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSV---QNGGCHPLATCRETSDTVRSVISC 63
CINT G C CP G+ G C C+ +NGG TCR++SD C
Sbjct: 176 CINTPGSFHC-LCPLGYTG--LLCENPIVPCAPSPCRNGG-----TCRQSSDVT---YDC 224
Query: 64 TCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
C PG G + + + C G C +GG C G Y CQC P +TG+
Sbjct: 225 ACLPGFEGQNCEV-------NVDDCPGHRCLNGGTCV-DGVNTYNCQCPPEWTGQ 271
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 19/105 (18%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQ---NGGCHPLATCRETSDTVRSVISCTCPPGMGGS-- 72
+CP G+ GD +C C+ Q NGG D V + C+CPPG G
Sbjct: 1111 ECPTGYSGD--SCEDDVDECASQPCQNGG--------SCIDLVAHYL-CSCPPGTLGVLC 1159
Query: 73 GVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
+ C G S + G+ C H G C + G+RC C PG+TG
Sbjct: 1160 EINEDDCGPGPSLD--SGLRCLHNGTCVDLVG-GFRCNCPPGYTG 1201
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 14/99 (14%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMG 78
C GW G C Q + ++ C TC TSD + CTC PG G ++
Sbjct: 722 CDPGW--SGPRCSQSLAPDACESQPCQAGGTC--TSDGIG--FHCTCAPGFQGHQCEVL- 774
Query: 79 CAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
+PC CEHGG C D+ C C PG+ G
Sbjct: 775 -------SPCTPSLCEHGGHCESDPDQLTVCSCPPGWQG 806
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 63 CTCPPGMGGSGVGL-MGCAYGMSGNPCGGVTCEHGGICAPIGDRG-YRCQCEPGFTG 117
C CPPG+ G + G + C C HGG C P+ +RC C PG+ G
Sbjct: 1315 CACPPGLSGPSCRVSRASPSGATNTSCAATPCLHGGSCLPVQSVPFFRCVCAPGWGG 1371
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 37/96 (38%), Gaps = 33/96 (34%)
Query: 54 SDTVRSVISCTCPPGMGG----------------------SGVGLMG--CAYGMSG---- 85
+D V S +CTCPPG GG GV C G +G
Sbjct: 904 TDHVAS-FTCTCPPGYGGFHCETDLLDCSPSSCFNGGTCVDGVNSFSCLCRPGYTGTHCQ 962
Query: 86 ---NPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
+PC C HGGIC P G+ C C GFTG
Sbjct: 963 YKVDPCFSRPCLHGGICNPT-HSGFECTCREGFTGN 997
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 87 PCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
PC C +GG C D Y C C PGF G++
Sbjct: 202 PCAPSPCRNGGTCRQSSDVTYDCACLPGFEGQN 234
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 61 ISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
SCTCP G GS L + C C +G C D GY C+C GF G
Sbjct: 493 FSCTCPSGFSGSTCQL-------DVDECASTPCRNGAKCVDQPD-GYECRCAEGFEG 541
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 41/115 (35%), Gaps = 14/115 (12%)
Query: 6 ECINTQGYRKCG-QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCT 64
C + Q R+ C GWVG+ +G C C+ + + SC
Sbjct: 55 RCTHQQPSREAACLCLPGWVGERCQLED-----PCHSGPCAGRGVCQSSVVAGVARFSCR 109
Query: 65 CPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
C G G L +PC C HG C+ D Y C C PG+ G +
Sbjct: 110 CLRGFRGPDCSLP--------DPCFSSPCAHGAPCSVGSDGRYACACPPGYQGRN 156
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 44 CHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIG 103
CH A C + R++ CTCPPG G C + G CEH G C +
Sbjct: 362 CHEDAICDTNPVSGRAI--CTCPPGFTGG-----ACDQDVDECSIGANPCEHLGRC--VN 412
Query: 104 DRG-YRCQCEPGFTG 117
+G + CQC G+TG
Sbjct: 413 TQGSFLCQCGRGYTG 427
>sp|P35556|FBN2_HUMAN Fibrillin-2 OS=Homo sapiens GN=FBN2 PE=1 SV=3
Length = 2912
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 49/120 (40%), Gaps = 18/120 (15%)
Query: 4 YVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISC 63
+ C+N G KC C GW+G+G C CS C A C T + R C
Sbjct: 1381 HASCLNIPGSFKCS-CREGWIGNGIKCID-LDECSNGTHQCSINAQCVNTPGSYR----C 1434
Query: 64 TCPPGMGGSGV---GLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGESE 120
C G G G + CA ++ CE+G G YRC+CE GFT S+
Sbjct: 1435 ACSEGFTGDGFTCSDVDECAENIN-------LCENGQCLNVPG--AYRCECEMGFTPASD 1485
>sp|P35448|TSP1_XENLA Thrombospondin-1 OS=Xenopus laevis GN=thbs1 PE=2 SV=1
Length = 1173
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 45/119 (37%), Gaps = 13/119 (10%)
Query: 11 QGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMG 70
G KCG CP G+ G+G TC+ C C L +T CPP
Sbjct: 570 DGSWKCGSCPPGYRGNGITCKD-IDECKEVPDACFTLNGVHRCENTEPGYNCLPCPPRFT 628
Query: 71 GS---GVGLMGCAYGMS----GNPCGGVT--CEHGGICAPIG---DRGYRCQCEPGFTG 117
G+ G G+ NPC T C C +G D +RC+C PG+ G
Sbjct: 629 GTQPFGKGIEEAKANKQVCKPRNPCADGTHDCHKNARCIYLGHYSDPMFRCECRPGYAG 687
>sp|Q95116|TSP2_BOVIN Thrombospondin-2 OS=Bos taurus GN=THBS2 PE=2 SV=2
Length = 1170
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 13/120 (10%)
Query: 11 QGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMG 70
G CG CP G++G+GT C + C+V C + +T CPP
Sbjct: 567 DGSWSCGSCPGGFLGNGTHC-EDLDECAVVTDVCFATSKAHRCVNTNPGYHCLPCPPRYK 625
Query: 71 GS---GVGLMGCAYGMS----GNPCGGVT--CEHGGICAPIG---DRGYRCQCEPGFTGE 118
G+ GVGL NPC T C C +G D Y+C+C+ G+ G+
Sbjct: 626 GNQPFGVGLEAARTEKQVCEPENPCKDKTHSCHRHAECIYLGHFSDPMYKCECQTGYAGD 685
>sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2
PE=1 SV=3
Length = 2471
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQ---NGGCHPLATCRETSDTVRSVISC 63
C+N G +C QCP G+ G C C+ NGG TCR+T D C
Sbjct: 198 CLNLPGSYQC-QCPQGFTG--QYCDSLYVPCAPSPCVNGG-----TCRQTGDFT---FEC 246
Query: 64 TCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
C PG GS C + + C C++GG+C G Y C+C P +TG+
Sbjct: 247 NCLPGFEGST-----CERNI--DDCPNHRCQNGGVCVD-GVNTYNCRCPPQWTGQ 293
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 23/114 (20%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSV---QNGGCHPLATCRETSDTVRSVISC 63
C NTQG C +CP G+ G C + C QNGG +C + +T SC
Sbjct: 888 CHNTQGSYMC-ECPPGF--SGMDCEEDIDDCLANPCQNGG-----SCMDGVNT----FSC 935
Query: 64 TCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
C PG G C M N C C++GG C+ + Y C+C+ GF G
Sbjct: 936 LCLPGFTGDK-----CQTDM--NECLSEPCKNGGTCSDYVN-SYTCKCQAGFDG 981
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
+CP G++G+ R QNGG TC + + +C C G G
Sbjct: 52 KCPEGFLGEYCQHRDPCEKNRCQNGG-----TC--VAQAMLGKATCRCASGFTGED---- 100
Query: 78 GCAYGMSGNPCG-GVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
C Y S +PC C +GG C + Y C C+ GFTG+
Sbjct: 101 -CQYSTS-HPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKE 141
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 87 PCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
PC C +GG C GD + C C PGF G +
Sbjct: 224 PCAPSPCVNGGTCRQTGDFTFECNCLPGFEGST 256
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Query: 63 CTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
C CPPG G M C + + C C++GG C G + C C PGFTG+
Sbjct: 897 CECPPGFSG-----MDCEEDI--DDCLANPCQNGGSCMD-GVNTFSCLCLPGFTGDK 945
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCP 66
C++ G +C CP G+ G C+ CS C TC + ++ C CP
Sbjct: 1040 CVDGLGTYRCS-CPLGYTG--KNCQTLVNLCS--RSPCKNKGTCVQK----KAESQCLCP 1090
Query: 67 PGMGGSGVGLMGCAYGMSGNPCGGVT---CEHGGICAPIGDRGYRCQCEPGFTG 117
G G+ + + ++ + G + C+H G+C G+ Y CQC G+TG
Sbjct: 1091 SGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHY-CQCPLGYTG 1143
>sp|P31695|NOTC4_MOUSE Neurogenic locus notch homolog protein 4 OS=Mus musculus GN=Notch4
PE=1 SV=2
Length = 1964
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 59 SVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
S C CPPG G C M NPC C HG C P GY CQC PG+ G+
Sbjct: 908 SSYFCRCPPGFQGKL-----CQDNM--NPCEPNPCHHGSTCVP-QPSGYVCQCAPGYEGQ 959
Query: 119 S 119
+
Sbjct: 960 N 960
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 17/111 (15%)
Query: 7 CINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCP 66
CINT G C C G+ G + C C Q CHP +TC + + + C CP
Sbjct: 449 CINTPGSFNC-LCLPGYTG--SRCEADHNECLSQP--CHPGSTCLD----LLATFHCLCP 499
Query: 67 PGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
PG+ G + N C C + C + + G++C C PGFTG
Sbjct: 500 PGLEGR-------LCEVEVNECTSNPCLNQAACHDLLN-GFQCLCLPGFTG 542
>sp|Q09163|DLK1_MOUSE Protein delta homolog 1 OS=Mus musculus GN=Dlk1 PE=1 SV=1
Length = 385
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 27 GTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGN 86
G C+ C + C C + S SC CPPG G+ ++ + N
Sbjct: 121 GKDCQHKAGPCVINGSPCQHGGACVDDEGQA-SHASCLCPPGFSGNFCEIVAATNSCTPN 179
Query: 87 PCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
P CE+ G+C IG +RC+C GF ++
Sbjct: 180 P-----CENDGVCTDIGG-DFRCRCPAGFVDKT 206
>sp|A2AVA0|SVEP1_MOUSE Sushi, von Willebrand factor type A, EGF and pentraxin
domain-containing protein 1 OS=Mus musculus GN=Svep1 PE=1
SV=1
Length = 3567
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
+CP G++G T C + C Q C ATC++ +++ R C CP G G+ L
Sbjct: 1331 KCPPGFLG--TRCEKNVDECLSQ--PCQNGATCKDGANSFR----CQCPAGFTGTHCEL- 1381
Query: 78 GCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
+ N C C + C + Y C+C+PGF+G
Sbjct: 1382 ------NINECQSNPCRNQATCVDELN-SYSCKCQPGFSG 1414
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 61 ISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
SC CPPG +G + + C C++G C G +RCQC GFTG
Sbjct: 1328 FSCKCPPG-------FLGTRCEKNVDECLSQPCQNGATCKD-GANSFRCQCPAGFTG 1376
>sp|Q80TR4|SLIT1_MOUSE Slit homolog 1 protein OS=Mus musculus GN=Slit1 PE=1 SV=2
Length = 1531
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 62 SCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
SC C G G+ +G PCGG+ C HG C +G C C PGF+GE
Sbjct: 1397 SCQCQDGYSGALCNQVGAV----AEPCGGLQCLHGH-CQASATKGAHCVCSPGFSGE 1448
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 63 CTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
C C G GG + C + G PC G C HG C P+ Y CQC+ G++G
Sbjct: 1359 CHCEAGWGG-----LHCDQPVDG-PCHGHKCVHGK-CVPLDALAYSCQCQDGYSG 1406
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 28/63 (44%), Gaps = 13/63 (20%)
Query: 59 SVISCTCPPGMGGSG--VGLMGCAYGMSGNPCGGVTCEHGGICAPIG--DRGYRCQCEPG 114
V CTCP G G V L GC S NPCG +GG C D G+ C C G
Sbjct: 946 EVYRCTCPSGYKGRHCEVSLDGC----SSNPCG-----NGGTCHAQEGEDAGFTCSCPSG 996
Query: 115 FTG 117
F G
Sbjct: 997 FEG 999
>sp|Q9R0G6|COMP_MOUSE Cartilage oligomeric matrix protein OS=Mus musculus GN=Comp PE=1
SV=2
Length = 755
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 2 TPYVECINTQGYRKCGQCPHGWVGDGTT--CRQGTTGCSV-QNGGCHPLATCRETSDTVR 58
P C+NT+G +CG C G+VGD T+ R+G C CH A C D R
Sbjct: 190 VPNSVCVNTRGSFQCGPCQPGFVGDQTSGCQRRGQHFCPDGSPSPCHEKANCVLERDGSR 249
Query: 59 SVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTC 93
SC C G G+G+ L G + G P + C
Sbjct: 250 ---SCVCAVGWAGNGL-LCGRDTDLDGFPDEKLRC 280
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 3 PYVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVIS 62
P V C T +CG CP G+ G+G+ C C+ C P C TS
Sbjct: 96 PGVVCSETATGARCGPCPPGYTGNGSHC-TDVNECNAH--PCFPRVRCINTSPGFHCE-- 150
Query: 63 CTCPPGMGGSGVGLMGCAYGMSGNP-CGGVT-CEHGG-ICAP----IGDRG-YRC-QCEP 113
CPPG G +G + S C + CE G C P + RG ++C C+P
Sbjct: 151 -ACPPGFSGPTHEGVGLTFAKSNKQVCTDINECETGQHNCVPNSVCVNTRGSFQCGPCQP 209
Query: 114 GFTGES 119
GF G+
Sbjct: 210 GFVGDQ 215
>sp|P21783|NOTCH_XENLA Neurogenic locus notch protein homolog OS=Xenopus laevis GN=notch1
PE=1 SV=3
Length = 2524
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 49/116 (42%), Gaps = 22/116 (18%)
Query: 6 ECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQ---NGGCHPLATCRETSDTVRSVIS 62
+CIN G +C C + + G C + C+ NGG TCR+T DT
Sbjct: 193 QCINEFGSYRC-TCQNRFTG--RNCDEPYVPCNPSPCLNGG-----TCRQTDDTS---YD 241
Query: 63 CTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
CTC PG G C + C C +GG C G Y CQC P +TG+
Sbjct: 242 CTCLPGFSG-----QNCEENIDD--CPSNNCRNGGTCVD-GVNTYNCQCPPDWTGQ 289
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 50 CRETSDTVRSVISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRC 109
C+E+ D SC CPPG G C M N C C +G C + Y+C
Sbjct: 843 CKESEDF--ETFSCECPPGWQG-----QTCEIDM--NECVNRPCRNGATCQNT-NGSYKC 892
Query: 110 QCEPGFTGES 119
C+PG+TG +
Sbjct: 893 NCKPGYTGRN 902
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 30 CRQGTTG--CSVQNGGCHPLA-----TCRETSDTVRSVISCTCPPGMGGSGVGLMGCAYG 82
CRQG TG C GC + TC S+T R I C CPPG G+ C Y
Sbjct: 1294 CRQGFTGRRCESVVDGCKGMPCRNGGTCAVASNTERGFI-CKCPPGFDGAT-----CEY- 1346
Query: 83 MSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
C + C++GG C + +C C G+TG
Sbjct: 1347 -DSRTCSNLRCQNGGTCISVLTSS-KCVCSEGYTG 1379
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 54/148 (36%), Gaps = 47/148 (31%)
Query: 6 ECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCS---VQNGGCHPLATCRETSDTVRSVIS 62
E +N+ KC +CP GW GD +C+Q S G C P ++ +
Sbjct: 118 ELLNSVTEYKC-RCPPGWTGD--SCQQADPCASNPCANGGKCLPFE--------IQYI-- 164
Query: 63 CTCPPGM-------------------GGSGVGLMG-----CAYGMSGN-------PCGGV 91
C CPPG GG + G C +G PC
Sbjct: 165 CKCPPGFHGATCKQDINECSQNPCKNGGQCINEFGSYRCTCQNRFTGRNCDEPYVPCNPS 224
Query: 92 TCEHGGICAPIGDRGYRCQCEPGFTGES 119
C +GG C D Y C C PGF+G++
Sbjct: 225 PCLNGGTCRQTDDTSYDCTCLPGFSGQN 252
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 22/103 (21%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQ---NGGCHPLATCRETSDTVRSVISCTCPPGMGGSGV 74
QCP G+ G + C+ C + NGG TC+++ T + CTCP G G
Sbjct: 1007 QCPPGFTG--SYCQHDINECDSKPCLNGG-----TCQDSYGTYK----CTCPQGYTG--- 1052
Query: 75 GLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
+ C + C C++GG C + YRC+C+ G+TG
Sbjct: 1053 --LNCQNLVRW--CDSSPCKNGGKCWQTNNF-YRCECKSGWTG 1090
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 44/101 (43%), Gaps = 18/101 (17%)
Query: 18 QCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLM 77
CP G+ G C + C+ + C A C +D V S +CTC PG G
Sbjct: 931 NCPAGFRG--PKCEEDINECA--SNPCKNGANC---TDCVNSY-TCTCQPGFSG------ 976
Query: 78 GCAYGMSGNP-CGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
+ S P C +C +GG C G + CQC PGFTG
Sbjct: 977 --IHCESNTPDCTESSCFNGGTCID-GINTFTCQCPPGFTG 1014
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 9/56 (16%)
Query: 63 CTCPPGMGGSGVGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGE 118
CTCP G G + C + C C++G I GY C CEPG+TG+
Sbjct: 626 CTCPKGTTG-----VNCETKIDD--CASNLCDNGKCIDKID--GYECTCEPGYTGK 672
>sp|Q61555|FBN2_MOUSE Fibrillin-2 OS=Mus musculus GN=Fbn2 PE=1 SV=2
Length = 2907
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 50/126 (39%), Gaps = 30/126 (23%)
Query: 4 YVECINTQGYRKCGQCPHGWVGDGTTC------RQGTTGCSVQNGGCHPLATCRETSDTV 57
+ C+N G KC C GWVG+G C GT CS+ A C T +
Sbjct: 1374 HASCLNVPGSFKCS-CREGWVGNGIKCIDLDECANGTHQCSIN-------AQCVNTPGSY 1425
Query: 58 RSVISCTCPPGMGGSGV---GLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPG 114
R C C G G G + CA + CE+G G YRC+CE G
Sbjct: 1426 R----CACSEGFTGDGFTCSDVDECAENTN-------LCENGQCLNVPG--AYRCECEMG 1472
Query: 115 FTGESE 120
FT S+
Sbjct: 1473 FTPASD 1478
>sp|Q25464|FP2_MYTGA Adhesive plaque matrix protein 2 OS=Mytilus galloprovincialis
GN=FP2 PE=2 SV=1
Length = 473
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 17/105 (16%)
Query: 20 PHGWVGDGTTCRQGTTGCSVQNGGCHPLA-----TCRETSDTVRSVISCTCPPGMGGSGV 74
P G G C G +G + Q C P TC ++D SC C PG G
Sbjct: 172 PDGKTGYKCRCVDGYSGPTCQENACKPNPCSNGGTC--SADKF-GDYSCECRPGYFGPEC 228
Query: 75 GLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
CA NPC ++GGIC+ G GYRC+C+ G++G +
Sbjct: 229 ERYVCA----PNPC-----KNGGICSSDGSGGYRCRCKGGYSGPT 264
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 86 NPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
N C C++ G C+P+G GY+C C G+TG
Sbjct: 120 NVCSPNPCKNNGKCSPLGKTGYKCTCSGGYTG 151
>sp|P35440|TSP2_CHICK Thrombospondin-2 OS=Gallus gallus GN=THBS2 PE=2 SV=1
Length = 1178
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 13/123 (10%)
Query: 11 QGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMG 70
G CG CP G++G+GT C + C + C + +T CPP
Sbjct: 575 DGSWSCGPCPAGFLGNGTVC-EDLDECIAVSDVCFKVNQVHRCVNTNPGFHCLPCPPRYK 633
Query: 71 GS---GVGLMGCAYGMS----GNPCGGVT--CEHGGICAPIG---DRGYRCQCEPGFTGE 118
GS GVGL NPC T C C +G D Y+C+C G+ G+
Sbjct: 634 GSQPYGVGLEVAKTEKQVCEPENPCKDKTHSCHKSAECIYLGHFSDPMYKCECRTGYAGD 693
Query: 119 SEL 121
+
Sbjct: 694 GRI 696
>sp|Q9IAT6|DLLC_DANRE Delta-like protein C OS=Danio rerio GN=dlc PE=2 SV=1
Length = 664
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCTCPPGMGGSGVGLMG 78
CP G+ G C C+ +G C TC E SC CPPG GS
Sbjct: 331 CPQGFYGKN--CEVSAMTCA--DGPCFNGGTCMEKGS---GSYSCRCPPGYMGSN----- 378
Query: 79 CAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTG 117
C + + C C +GG C +G++ C+C PGFTG
Sbjct: 379 CEKKI--DRCSSDPCANGGQCLDLGNKA-TCRCRPGFTG 414
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 11/60 (18%)
Query: 62 SCTCPPGMGGSG--VGLMGCAYGMSGNPCGGVTCEHGGICAPIGDRGYRCQCEPGFTGES 119
+CTCP G G V M CA G C +GG C G Y C+C PG+ G +
Sbjct: 328 TCTCPQGFYGKNCEVSAMTCADG---------PCFNGGTCMEKGSGSYSCRCPPGYMGSN 378
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 45/120 (37%), Gaps = 26/120 (21%)
Query: 19 CPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCR-----------ETSD-------TVRSV 60
C GW GD T +GCS +NG C C+ E + T
Sbjct: 189 CLPGWKGDYCTEPICLSGCSEENGYCEAPGECKCRIGWEGPLCDECTRHPGCLHGTCNQP 248
Query: 61 ISCTCPPGMGGSGVGLMGCAYGMSGNPCGGVT-CEHGGICAPIGDRGYRCQCEPGFTGES 119
CTC G GG + C + N C C + C G Y C C+PGF+G++
Sbjct: 249 FQCTCKEGWGG-----LFCNEDL--NFCTNHKPCRNDATCTNTGQGSYTCICKPGFSGKN 301
>sp|Q8JHW2|TSP3A_DANRE Thrombospondin-3a OS=Danio rerio GN=thbs3a PE=2 SV=2
Length = 962
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 53/124 (42%), Gaps = 19/124 (15%)
Query: 5 VECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETSDTVRSVISCT 64
+E GYR CG CP G G+GT C Q CS + C+ C +T R +
Sbjct: 293 METFEYPGYR-CGPCPDGMTGNGTHC-QDIDECS-EAQPCYTPGAC---VNTARGFTCES 346
Query: 65 CPPGMGGSGVGLMGCAYGMSG-NPCGGVT--CEHGGICAP-------IGDRGYRC-QCEP 113
CPPGM G + +G Y S C + + C P IG +RC QC+
Sbjct: 347 CPPGMWGPPLSGVGVEYAKSHRQECSDIDECVDLANACTPNSVCINIIG--SFRCGQCKT 404
Query: 114 GFTG 117
G+ G
Sbjct: 405 GYVG 408
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 13/53 (24%)
Query: 2 TPYVECINTQGYRKCGQCPHGWVGDGTTCRQGTTGCSVQNGGCHPLATCRETS 54
TP CIN G +CGQC G+VG+ Q GC P +C S
Sbjct: 385 TPNSVCINIIGSFRCGQCKTGYVGN-------------QTAGCFPRKSCSSLS 424
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.142 0.502
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,904,017
Number of Sequences: 539616
Number of extensions: 2562856
Number of successful extensions: 8845
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 405
Number of HSP's that attempted gapping in prelim test: 5997
Number of HSP's gapped (non-prelim): 2341
length of query: 129
length of database: 191,569,459
effective HSP length: 95
effective length of query: 34
effective length of database: 140,305,939
effective search space: 4770401926
effective search space used: 4770401926
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)