Query psy4101
Match_columns 82
No_of_seqs 159 out of 1025
Neff 5.5
Searched_HMMs 13730
Date Fri Aug 16 17:01:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4101.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/4101hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ju2a1 c.3.1.2 (A:1-293,A:464 99.9 2.1E-24 1.5E-28 157.2 2.3 57 4-60 243-301 (351)
2 d1gpea1 c.3.1.2 (A:1-328,A:525 99.8 2E-22 1.5E-26 148.4 3.7 57 4-60 279-338 (391)
3 d1cf3a1 c.3.1.2 (A:3-324,A:521 99.8 5.7E-20 4.2E-24 134.2 3.9 56 4-59 273-330 (385)
4 d1kdga1 c.3.1.2 (A:215-512,A:6 99.5 4.6E-16 3.4E-20 112.6 -1.3 41 4-44 238-279 (360)
5 d3coxa1 c.3.1.2 (A:5-318,A:451 99.0 1.6E-10 1.1E-14 81.7 4.0 25 5-29 273-297 (370)
6 d1n4wa1 c.3.1.2 (A:9-318,A:451 98.7 2.7E-09 2E-13 74.9 4.1 48 4-60 268-316 (367)
7 d2f5va1 c.3.1.2 (A:43-354,A:55 98.6 2.4E-08 1.7E-12 68.7 5.1 42 4-45 265-306 (379)
8 d1kdga2 d.16.1.1 (A:513-693) F 89.4 0.084 6.1E-06 33.5 2.1 21 53-74 1-21 (181)
9 d2ivda1 c.3.1.2 (A:10-306,A:41 83.5 0.46 3.3E-05 29.0 3.1 23 5-27 262-284 (347)
10 d1pj5a2 c.3.1.2 (A:4-219,A:339 80.4 0.59 4.3E-05 30.3 3.0 25 6-31 189-213 (305)
11 d1ryia1 c.3.1.2 (A:1-218,A:307 78.3 1.1 8E-05 28.3 3.7 28 7-35 192-219 (276)
12 d1cf3a2 d.16.1.1 (A:325-520) G 76.6 0.48 3.5E-05 30.5 1.5 18 53-71 1-18 (196)
13 d1gpea2 d.16.1.1 (A:329-524) G 75.2 0.54 4E-05 30.3 1.5 17 53-70 1-17 (196)
14 d1y0pa2 c.3.1.4 (A:111-361,A:5 69.6 1.6 0.00012 28.2 2.9 24 5-28 191-215 (308)
15 d1d4ca2 c.3.1.4 (A:103-359,A:5 63.7 2.4 0.00018 27.7 2.8 23 5-27 198-221 (322)
16 d1jnra2 c.3.1.4 (A:2-256,A:402 62.6 2.4 0.00018 27.7 2.7 17 5-21 201-217 (356)
17 d2gf3a1 c.3.1.2 (A:1-217,A:322 62.4 0.87 6.3E-05 29.1 0.3 26 7-33 191-216 (281)
18 d2f5va2 d.16.1.1 (A:355-552) P 61.1 0.21 1.5E-05 32.9 -3.0 18 50-68 14-31 (198)
19 d2gqfa1 c.3.1.8 (A:1-194,A:343 58.1 2.5 0.00018 26.8 2.1 39 6-46 153-191 (253)
20 d1qo8a2 c.3.1.4 (A:103-359,A:5 56.9 3.7 0.00027 26.9 2.8 23 5-27 194-217 (317)
21 d2i0za1 c.3.1.8 (A:1-192,A:362 49.3 3.1 0.00022 25.7 1.3 20 6-25 152-171 (251)
22 d1kf6a2 c.3.1.4 (A:0-225,A:358 48.4 5.2 0.00038 26.3 2.5 17 5-21 181-197 (311)
23 d2bs2a2 c.3.1.4 (A:1-250,A:372 43.5 7.8 0.00056 24.9 2.7 17 5-21 204-220 (336)
24 d1chua2 c.3.1.4 (A:2-237,A:354 33.6 17 0.0012 23.2 3.1 17 5-21 191-207 (305)
25 d2cula1 c.3.1.7 (A:2-231) GidA 31.3 10 0.00074 24.9 1.7 16 7-22 110-125 (230)
26 d1tzfa_ c.68.1.13 (A:) Glucose 26.8 10 0.00076 22.9 1.1 8 11-18 4-11 (259)
27 d1neka2 c.3.1.4 (A:1-235,A:356 25.1 21 0.0016 23.1 2.5 18 5-22 190-207 (330)
No 1
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]}
Probab=99.88 E-value=2.1e-24 Score=157.20 Aligned_cols=57 Identities=40% Similarity=0.650 Sum_probs=53.8
Q ss_pred eeEEEEe-cEEEEcCCCcchHHHHHHcCCCCCCccccCCCCeeeeCC-CccccccCcCC
Q psy4101 4 LRHRPQA-SNVILSAGTIGSPQILMISGIGPKDHLQDMGIPVIHDLR-VGDNLQDHVGM 60 (82)
Q Consensus 4 ~~~~v~A-~eVILsaGa~~sP~lL~~SGig~~~~l~~~gI~~~~dlp-VG~nl~DH~~~ 60 (82)
+++.++| +|||||||||+||+|||+|||||+++|+++||+++.|+| ||+|||||+..
T Consensus 243 ~~~~v~a~~eVILsAGaI~TP~LLl~SGIGp~~~L~~~gI~~~~dlPgVG~NL~DH~~~ 301 (351)
T d1ju2a1 243 HQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQCLVGKVLD 301 (351)
T ss_dssp EEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTESCBTTTBC
T ss_pred EEEEeecCcEEEEeCccccCHHHHHHcCCCCHHHHHHcCCCeeccCCCcccccccCcCc
Confidence 3456888 899999999999999999999999999999999999999 99999999876
No 2
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]}
Probab=99.84 E-value=2e-22 Score=148.38 Aligned_cols=57 Identities=32% Similarity=0.425 Sum_probs=53.9
Q ss_pred eeEEEEe-cEEEEcCCCcchHHHHHHcCCCCCCccccCCCCeeeeCC--CccccccCcCC
Q psy4101 4 LRHRPQA-SNVILSAGTIGSPQILMISGIGPKDHLQDMGIPVIHDLR--VGDNLQDHVGM 60 (82)
Q Consensus 4 ~~~~v~A-~eVILsaGa~~sP~lL~~SGig~~~~l~~~gI~~~~dlp--VG~nl~DH~~~ 60 (82)
.+++++| ||||||||+|+||+|||+|||||+++|+++||++++|+| ||+|||||+..
T Consensus 279 ~~~~v~A~keVILaAGai~SP~LLl~SGIGp~~~L~~~gI~~v~dlP~Gvg~nl~dh~~~ 338 (391)
T d1gpea1 279 VNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGICSMMSRELGG 338 (391)
T ss_dssp EEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECCTTCTCBSCGGGTC
T ss_pred eEEEEEeCCEEEEecchhcchHHHHhcCCCcHHHHHHCCCCEEEECCcccccccccCccc
Confidence 4578999 899999999999999999999999999999999999998 99999999864
No 3
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]}
Probab=99.77 E-value=5.7e-20 Score=134.24 Aligned_cols=56 Identities=36% Similarity=0.399 Sum_probs=48.9
Q ss_pred eeEEEEe-cEEEEcCCCcchHHHHHHcCCCCCCccccCCCCeeeeCC-CccccccCcC
Q psy4101 4 LRHRPQA-SNVILSAGTIGSPQILMISGIGPKDHLQDMGIPVIHDLR-VGDNLQDHVG 59 (82)
Q Consensus 4 ~~~~v~A-~eVILsaGa~~sP~lL~~SGig~~~~l~~~gI~~~~dlp-VG~nl~DH~~ 59 (82)
+.++++| ||||||||||+||+|||+|||||+++|+++||+++.|+| ++.+++||+.
T Consensus 273 ~~~~v~A~keVILsAGAi~SP~LLl~SGIGp~~~L~~~gI~~~~dlP~g~~~~~~~~~ 330 (385)
T d1cf3a1 273 NTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGLCSMMPKEM 330 (385)
T ss_dssp EEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCTTCTCBSCGGG
T ss_pred CEEEEEeCCEEEEcCchhhCHHHHHhcCCCcHHHHHHCCCCeEEECCcchhccCCCCc
Confidence 4578999 899999999999999999999999999999999999999 4445555443
No 4
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}
Probab=99.50 E-value=4.6e-16 Score=112.59 Aligned_cols=41 Identities=39% Similarity=0.509 Sum_probs=37.6
Q ss_pred eeEEEEe-cEEEEcCCCcchHHHHHHcCCCCCCccccCCCCe
Q psy4101 4 LRHRPQA-SNVILSAGTIGSPQILMISGIGPKDHLQDMGIPV 44 (82)
Q Consensus 4 ~~~~v~A-~eVILsaGa~~sP~lL~~SGig~~~~l~~~gI~~ 44 (82)
+..+++| +|||||||||+||+|||+|||||+++|+++||.+
T Consensus 238 ~~~~v~a~~eVILsAGai~SP~LLl~SGIGp~~~L~~~gi~p 279 (360)
T d1kdga1 238 GFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNP 279 (360)
T ss_dssp GEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSH
T ss_pred eEEEEEECCEEEEechhHhChHHHHhcCCCchhhhHHhhcCc
Confidence 4567888 9999999999999999999999999999999964
No 5
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}
Probab=98.97 E-value=1.6e-10 Score=81.68 Aligned_cols=25 Identities=24% Similarity=0.482 Sum_probs=23.1
Q ss_pred eEEEEecEEEEcCCCcchHHHHHHc
Q psy4101 5 RHRPQASNVILSAGTIGSPQILMIS 29 (82)
Q Consensus 5 ~~~v~A~eVILsaGa~~sP~lL~~S 29 (82)
.++++||+||||||+++||+|||+|
T Consensus 273 ~~~~~A~~VILaAGai~Tp~LLL~S 297 (370)
T d3coxa1 273 TKVVTADRVFFAAGSVGTSKLLVSM 297 (370)
T ss_dssp EEEEEEEEEEECSHHHHHHHHHHHH
T ss_pred EEEEECCEEEEeeCHHHhHHHHHhC
Confidence 3578899999999999999999999
No 6
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}
Probab=98.75 E-value=2.7e-09 Score=74.93 Aligned_cols=48 Identities=21% Similarity=0.245 Sum_probs=34.2
Q ss_pred eeEEEEecEEEEcCCCcchHHHHHHcCCCCCCccccCCCCeeeeCC-CccccccCcCC
Q psy4101 4 LRHRPQASNVILSAGTIGSPQILMISGIGPKDHLQDMGIPVIHDLR-VGDNLQDHVGM 60 (82)
Q Consensus 4 ~~~~v~A~eVILsaGa~~sP~lL~~SGig~~~~l~~~gI~~~~dlp-VG~nl~DH~~~ 60 (82)
.+++++||+||||||+++||+|||+|.-. -++|- -++ ||+|+.||...
T Consensus 268 ~~~~i~Ak~VVLaAGai~Tp~LLl~S~~~-------g~l~~--~s~~lG~~~~~~l~~ 316 (367)
T d1n4wa1 268 ATKEISCRYLFLGAGSLGSTELLVRARDT-------GTLPN--LNSEVGAGWGCVLGK 316 (367)
T ss_dssp EEEEEEEEEEEECSHHHHHHHHHHHHHHT-------TSSTT--CCTTTTCCBSSCTTT
T ss_pred eEEEEecCEEEEecchhcCHHHHHhCCCC-------CCCCC--ccHhhcCCccccccc
Confidence 34678899999999999999999999310 01110 123 89988888654
No 7
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}
Probab=98.59 E-value=2.4e-08 Score=68.74 Aligned_cols=42 Identities=26% Similarity=0.373 Sum_probs=36.5
Q ss_pred eeEEEEecEEEEcCCCcchHHHHHHcCCCCCCccccCCCCee
Q psy4101 4 LRHRPQASNVILSAGTIGSPQILMISGIGPKDHLQDMGIPVI 45 (82)
Q Consensus 4 ~~~~v~A~eVILsaGa~~sP~lL~~SGig~~~~l~~~gI~~~ 45 (82)
+.++++|++||||||+++||+||+.|||++........++..
T Consensus 265 ~~~~i~a~~vilaaGa~~tp~lL~~Sg~~~~~~~~~~~~~~~ 306 (379)
T d2f5va1 265 DRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRPNPTNPPEL 306 (379)
T ss_dssp CEEEEEEEEEEECSCHHHHHHHHHHTTSSCCSSCCTTSCCSS
T ss_pred EEEEEeceEEEeccCccCCHHHHhhcccccccccccccCccc
Confidence 457788999999999999999999999999888877766543
No 8
>d1kdga2 d.16.1.1 (A:513-693) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}
Probab=89.44 E-value=0.084 Score=33.53 Aligned_cols=21 Identities=24% Similarity=0.205 Sum_probs=16.5
Q ss_pred ccccCcCCceeEEEecCCcccc
Q psy4101 53 NLQDHVGMAGLTFLVDKPVSIV 74 (82)
Q Consensus 53 nl~DH~~~~~~~~~~~~~~~~~ 74 (82)
||||||.+ .+.|..++..+.+
T Consensus 1 NLQDHp~~-~~~f~~~~~~~~~ 21 (181)
T d1kdga2 1 NAQDNPSI-NLVFTHPSIDAYE 21 (181)
T ss_dssp TBBCCCCE-EEEEECTTCCCGG
T ss_pred CCCCCCCe-eEEEEECCcccHH
Confidence 89999999 7899987654443
No 9
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}
Probab=83.46 E-value=0.46 Score=29.01 Aligned_cols=23 Identities=22% Similarity=0.346 Sum_probs=19.6
Q ss_pred eEEEEecEEEEcCCCcchHHHHH
Q psy4101 5 RHRPQASNVILSAGTIGSPQILM 27 (82)
Q Consensus 5 ~~~v~A~eVILsaGa~~sP~lL~ 27 (82)
..++.|+.||+|+++..+++||.
T Consensus 262 ~~~~~ad~VV~a~p~~~~~~Ll~ 284 (347)
T d2ivda1 262 RAELSVAQVVLAAPAHATAKLLR 284 (347)
T ss_dssp EEEEECSEEEECSCHHHHHHHHT
T ss_pred EEEEECCEEEECCCHHHHHHhcc
Confidence 45678899999999999999864
No 10
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}
Probab=80.40 E-value=0.59 Score=30.27 Aligned_cols=25 Identities=24% Similarity=0.193 Sum_probs=20.7
Q ss_pred EEEEecEEEEcCCCcchHHHHHHcCC
Q psy4101 6 HRPQASNVILSAGTIGSPQILMISGI 31 (82)
Q Consensus 6 ~~v~A~eVILsaGa~~sP~lL~~SGi 31 (82)
.+++|+.||+|+|+. |++++..-|+
T Consensus 189 g~i~a~~VV~aaG~~-s~~l~~~~g~ 213 (305)
T d1pj5a2 189 GVIPADIVVSCAGFW-GAKIGAMIGM 213 (305)
T ss_dssp EEEECSEEEECCGGG-HHHHHHTTTC
T ss_pred eeEECCEEEEecchh-HHHHHHHcCC
Confidence 357889999999975 8999888765
No 11
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}
Probab=78.28 E-value=1.1 Score=28.32 Aligned_cols=28 Identities=21% Similarity=0.304 Sum_probs=22.5
Q ss_pred EEEecEEEEcCCCcchHHHHHHcCCCCCC
Q psy4101 7 RPQASNVILSAGTIGSPQILMISGIGPKD 35 (82)
Q Consensus 7 ~v~A~eVILsaGa~~sP~lL~~SGig~~~ 35 (82)
+++|+.||+|+|+. |+.++...|+-+..
T Consensus 192 ~i~a~~vV~AaG~~-s~~l~~~~G~~~~~ 219 (276)
T d1ryia1 192 DVWANHVVVASGVW-SGMFFKQLGLNNAD 219 (276)
T ss_dssp EEEEEEEEECCGGG-THHHHHHTTCCCCS
T ss_pred EEEcCEEEECCCcc-HHHHHhhcCCCccc
Confidence 68899999999974 78888888876543
No 12
>d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger [TaxId: 5061]}
Probab=76.58 E-value=0.48 Score=30.55 Aligned_cols=18 Identities=22% Similarity=0.193 Sum_probs=15.4
Q ss_pred ccccCcCCceeEEEecCCc
Q psy4101 53 NLQDHVGMAGLTFLVDKPV 71 (82)
Q Consensus 53 nl~DH~~~~~~~~~~~~~~ 71 (82)
|||||+.+ .+.|+++...
T Consensus 1 NLQDH~~~-~i~~~~~~~~ 18 (196)
T d1cf3a2 1 NLQDQTTA-TVRSRITSAG 18 (196)
T ss_dssp CBBCCEEE-EEEEEECGGG
T ss_pred CccCcccc-eEEEEeccCc
Confidence 89999999 7999997643
No 13
>d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]}
Probab=75.21 E-value=0.54 Score=30.26 Aligned_cols=17 Identities=18% Similarity=0.231 Sum_probs=14.8
Q ss_pred ccccCcCCceeEEEecCC
Q psy4101 53 NLQDHVGMAGLTFLVDKP 70 (82)
Q Consensus 53 nl~DH~~~~~~~~~~~~~ 70 (82)
|||||+.+ .+.|+.+.+
T Consensus 1 NLQDH~~~-~i~~r~~~~ 17 (196)
T d1gpea2 1 NMQDQTTT-TVSSRASSA 17 (196)
T ss_dssp SBBCCEEE-EEEEEECGG
T ss_pred CCCCCCCc-eEEEEecCC
Confidence 89999999 799999754
No 14
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}
Probab=69.63 E-value=1.6 Score=28.22 Aligned_cols=24 Identities=21% Similarity=0.200 Sum_probs=17.8
Q ss_pred eEEEEecEEEEcCCCcch-HHHHHH
Q psy4101 5 RHRPQASNVILSAGTIGS-PQILMI 28 (82)
Q Consensus 5 ~~~v~A~eVILsaGa~~s-P~lL~~ 28 (82)
.+.++||.||||+|.+.. +.++..
T Consensus 191 ~~~i~Ak~VVlAtGG~~~n~~~~~~ 215 (308)
T d1y0pa2 191 YYWVKADAVILATGGFAKNNERVAK 215 (308)
T ss_dssp EEEEECSEEEECCCCCTTCHHHHHH
T ss_pred eeEeecCeEEEccCcccccHHHHHH
Confidence 467889999999998764 554443
No 15
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}
Probab=63.70 E-value=2.4 Score=27.73 Aligned_cols=23 Identities=17% Similarity=0.208 Sum_probs=17.1
Q ss_pred eEEEEecEEEEcCCCcch-HHHHH
Q psy4101 5 RHRPQASNVILSAGTIGS-PQILM 27 (82)
Q Consensus 5 ~~~v~A~eVILsaGa~~s-P~lL~ 27 (82)
.+.++||.||||+|.+.. +.++.
T Consensus 198 ~~~i~Ak~VIlAtGG~~~n~~~~~ 221 (322)
T d1d4ca2 198 YYVIKADAVVIAAGGFAKNNERVS 221 (322)
T ss_dssp EEEEECSEEEECCCCCTTCHHHHH
T ss_pred EEEEeCCeEEEcCCCcccCHHHHH
Confidence 456888999999998864 44433
No 16
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=62.57 E-value=2.4 Score=27.68 Aligned_cols=17 Identities=29% Similarity=0.182 Sum_probs=14.3
Q ss_pred eEEEEecEEEEcCCCcc
Q psy4101 5 RHRPQASNVILSAGTIG 21 (82)
Q Consensus 5 ~~~v~A~eVILsaGa~~ 21 (82)
.+.++||.||||+|.+.
T Consensus 201 ~~~i~Ak~VILATGG~~ 217 (356)
T d1jnra2 201 FYVFKAKAVILATGGAT 217 (356)
T ss_dssp EEEEECSEEEECCCCBC
T ss_pred EEEeeCCEEEEcCCCcc
Confidence 46788999999999864
No 17
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}
Probab=62.38 E-value=0.87 Score=29.06 Aligned_cols=26 Identities=19% Similarity=0.253 Sum_probs=19.9
Q ss_pred EEEecEEEEcCCCcchHHHHHHcCCCC
Q psy4101 7 RPQASNVILSAGTIGSPQILMISGIGP 33 (82)
Q Consensus 7 ~v~A~eVILsaGa~~sP~lL~~SGig~ 33 (82)
+++|+.||+|+|+. |+.++..-|+..
T Consensus 191 ~i~a~~VViAaG~~-s~~l~~~lg~~~ 216 (281)
T d2gf3a1 191 SYTADKLIVSMGAW-NSKLLSKLNLDI 216 (281)
T ss_dssp EEEEEEEEECCGGG-HHHHGGGGTEEC
T ss_pred EEEcCEEEECCCCc-chhhHHhcCCcc
Confidence 57889999999974 677776666544
No 18
>d2f5va2 d.16.1.1 (A:355-552) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}
Probab=61.06 E-value=0.21 Score=32.88 Aligned_cols=18 Identities=22% Similarity=0.211 Sum_probs=11.8
Q ss_pred CccccccCcCCceeEEEec
Q psy4101 50 VGDNLQDHVGMAGLTFLVD 68 (82)
Q Consensus 50 VG~nl~DH~~~~~~~~~~~ 68 (82)
+|||||||... ...+.+.
T Consensus 14 LgrnLmDsvg~-~~~~~~P 31 (198)
T d2f5va2 14 MSTELIDSVKS-DMTIRGT 31 (198)
T ss_dssp ECHHHHHHHTT-TCEEESC
T ss_pred hcchhhhccCc-ccccccc
Confidence 57777887766 4555554
No 19
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}
Probab=58.14 E-value=2.5 Score=26.75 Aligned_cols=39 Identities=28% Similarity=0.477 Sum_probs=24.5
Q ss_pred EEEEecEEEEcCCCcchHHHHHHcCCCCCCccccCCCCeee
Q psy4101 6 HRPQASNVILSAGTIGSPQILMISGIGPKDHLQDMGIPVIH 46 (82)
Q Consensus 6 ~~v~A~eVILsaGa~~sP~lL~~SGig~~~~l~~~gI~~~~ 46 (82)
.+++|+.||+|+|....|++- .+|.| ..-.+++|++++.
T Consensus 153 ~~~~a~~VIiAtGG~S~p~~G-~~g~g-~~~a~~~~~~i~~ 191 (253)
T d2gqfa1 153 TQWQCKNLIVATGGLSMPGLG-ATPFG-YQIAEQFGIPVIP 191 (253)
T ss_dssp EEEEESEEEECCCCSSCGGGT-CCSHH-HHHHHHTTCCEEE
T ss_pred EEEEeCEEEEcCCcccccccC-CCchH-HHHHHhccccccc
Confidence 568899999999999888752 01111 0223456776643
No 20
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}
Probab=56.87 E-value=3.7 Score=26.90 Aligned_cols=23 Identities=22% Similarity=0.353 Sum_probs=16.8
Q ss_pred eEEEEecEEEEcCCCcc-hHHHHH
Q psy4101 5 RHRPQASNVILSAGTIG-SPQILM 27 (82)
Q Consensus 5 ~~~v~A~eVILsaGa~~-sP~lL~ 27 (82)
.+.++||.||||+|.+. .+.++.
T Consensus 194 ~~~i~Ak~VVlAtGG~~~n~~~~~ 217 (317)
T d1qo8a2 194 YYMIGAKSVVLATGGYGMNKEMIA 217 (317)
T ss_dssp EEEEEEEEEEECCCCCTTCHHHHH
T ss_pred EEEEeccceEEeccccccCHHHHH
Confidence 46788899999999875 344433
No 21
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}
Probab=49.29 E-value=3.1 Score=25.74 Aligned_cols=20 Identities=20% Similarity=0.393 Sum_probs=16.8
Q ss_pred EEEEecEEEEcCCCcchHHH
Q psy4101 6 HRPQASNVILSAGTIGSPQI 25 (82)
Q Consensus 6 ~~v~A~eVILsaGa~~sP~l 25 (82)
.+++|+.||+|+|+...|++
T Consensus 152 ~~i~a~~vI~AtGg~S~p~~ 171 (251)
T d2i0za1 152 EVLETNHVVIAVGGKSVPQT 171 (251)
T ss_dssp CEEECSCEEECCCCSSSGGG
T ss_pred CeEecCeEEEccCCcccccc
Confidence 35788999999999988863
No 22
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]}
Probab=48.39 E-value=5.2 Score=26.32 Aligned_cols=17 Identities=24% Similarity=0.423 Sum_probs=14.1
Q ss_pred eEEEEecEEEEcCCCcc
Q psy4101 5 RHRPQASNVILSAGTIG 21 (82)
Q Consensus 5 ~~~v~A~eVILsaGa~~ 21 (82)
.+.++|+.||||+|.+.
T Consensus 181 ~~~~~AkaVILATGG~g 197 (311)
T d1kf6a2 181 LVQIRANAVVMATGGAG 197 (311)
T ss_dssp EEEEECSCEEECCCCCG
T ss_pred EEEEECCEEEEcCCCcc
Confidence 46778899999999875
No 23
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}
Probab=43.50 E-value=7.8 Score=24.91 Aligned_cols=17 Identities=18% Similarity=0.233 Sum_probs=14.2
Q ss_pred eEEEEecEEEEcCCCcc
Q psy4101 5 RHRPQASNVILSAGTIG 21 (82)
Q Consensus 5 ~~~v~A~eVILsaGa~~ 21 (82)
...++||.||||+|.+.
T Consensus 204 ~~~i~Ak~VvlATGG~~ 220 (336)
T d2bs2a2 204 IIAYVAKGTLIATGGYG 220 (336)
T ss_dssp EEEEECSEEEECCCCCG
T ss_pred EEEEecCeEEEeccccc
Confidence 45688899999999885
No 24
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]}
Probab=33.59 E-value=17 Score=23.22 Aligned_cols=17 Identities=24% Similarity=0.311 Sum_probs=13.7
Q ss_pred eEEEEecEEEEcCCCcc
Q psy4101 5 RHRPQASNVILSAGTIG 21 (82)
Q Consensus 5 ~~~v~A~eVILsaGa~~ 21 (82)
...+.||.||||+|.+.
T Consensus 191 ~~~~~ak~VilAtGG~~ 207 (305)
T d1chua2 191 VETCHAKAVVLATGGAS 207 (305)
T ss_dssp EEEEECSEEEECCCCCG
T ss_pred EEEEeecceEEeeeccc
Confidence 45566799999999875
No 25
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}
Probab=31.26 E-value=10 Score=24.93 Aligned_cols=16 Identities=19% Similarity=0.401 Sum_probs=13.7
Q ss_pred EEEecEEEEcCCCcch
Q psy4101 7 RPQASNVILSAGTIGS 22 (82)
Q Consensus 7 ~v~A~eVILsaGa~~s 22 (82)
.++|+.|||+.|+|-.
T Consensus 110 ~~~AkaVILtTGTFL~ 125 (230)
T d2cula1 110 PARGEKVVLAVGSFLG 125 (230)
T ss_dssp CEECSEEEECCTTCSS
T ss_pred EEEEeEEEEccCccee
Confidence 5788999999998854
No 26
>d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]}
Probab=26.85 E-value=10 Score=22.94 Aligned_cols=8 Identities=50% Similarity=0.808 Sum_probs=7.2
Q ss_pred cEEEEcCC
Q psy4101 11 SNVILSAG 18 (82)
Q Consensus 11 ~eVILsaG 18 (82)
|.||||||
T Consensus 4 kAiILAAG 11 (259)
T d1tzfa_ 4 KAVILAGG 11 (259)
T ss_dssp EEEEEECS
T ss_pred eEEEECCC
Confidence 78999998
No 27
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]}
Probab=25.09 E-value=21 Score=23.09 Aligned_cols=18 Identities=22% Similarity=0.255 Sum_probs=14.3
Q ss_pred eEEEEecEEEEcCCCcch
Q psy4101 5 RHRPQASNVILSAGTIGS 22 (82)
Q Consensus 5 ~~~v~A~eVILsaGa~~s 22 (82)
...++|+.||||+|.+..
T Consensus 190 ~~~~~a~~vIlAtGG~~~ 207 (330)
T d1neka2 190 VVYFKARATVLATGGAGR 207 (330)
T ss_dssp EEEEEESCEEECCCCCGG
T ss_pred EEEEeccEEEEcCCCccc
Confidence 456778999999998753
Done!