Query psy4102
Match_columns 1049
No_of_seqs 572 out of 3570
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 17:03:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4102.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4102hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 5.1E-86 1.7E-90 795.7 38.6 306 90-403 2-325 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 6.4E-83 2.2E-87 769.4 37.7 306 88-402 17-340 (583)
3 3q9t_A Choline dehydrogenase a 100.0 3E-81 1E-85 755.8 32.1 324 88-429 4-349 (577)
4 1gpe_A Protein (glucose oxidas 100.0 7.1E-74 2.4E-78 697.2 33.5 304 89-402 23-344 (587)
5 2jbv_A Choline oxidase; alcoho 100.0 1.2E-71 4.2E-76 672.9 39.5 300 89-401 12-320 (546)
6 3t37_A Probable dehydrogenase; 100.0 9.5E-71 3.3E-75 665.9 43.2 290 89-393 16-311 (526)
7 1ju2_A HydroxynitrIle lyase; f 100.0 7.1E-62 2.4E-66 586.4 28.5 272 88-399 24-306 (536)
8 1kdg_A CDH, cellobiose dehydro 100.0 1E-58 3.5E-63 562.4 34.0 280 88-399 5-316 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 8.1E-54 2.8E-58 513.3 31.9 277 89-393 4-319 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 1.2E-51 3.9E-56 494.7 30.5 273 88-393 9-324 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 2.5E-37 8.7E-42 377.7 30.5 281 87-402 43-370 (623)
12 3fim_B ARYL-alcohol oxidase; A 99.9 9.4E-23 3.2E-27 245.4 4.2 318 599-992 205-565 (566)
13 3qvp_A Glucose oxidase; oxidor 99.8 2.7E-20 9.2E-25 224.3 14.5 323 599-996 224-582 (583)
14 3q9t_A Choline dehydrogenase a 99.7 5.6E-19 1.9E-23 213.1 6.8 330 612-994 216-574 (577)
15 3t37_A Probable dehydrogenase; 99.7 1.3E-17 4.6E-22 200.8 5.3 287 600-989 208-520 (526)
16 1gpe_A Protein (glucose oxidas 99.6 6.8E-16 2.3E-20 187.5 13.1 317 599-995 228-585 (587)
17 4at0_A 3-ketosteroid-delta4-5a 99.6 2.6E-14 9E-19 171.2 16.5 67 291-360 204-271 (510)
18 2jbv_A Choline oxidase; alcoho 99.5 4.9E-14 1.7E-18 169.8 8.3 307 599-998 206-535 (546)
19 1ju2_A HydroxynitrIle lyase; f 99.4 2.3E-13 7.9E-18 163.6 7.3 301 600-996 194-521 (536)
20 1y0p_A Fumarate reductase flav 99.3 6.8E-12 2.3E-16 152.3 14.9 65 291-359 257-323 (571)
21 1qo8_A Flavocytochrome C3 fuma 99.3 5E-12 1.7E-16 153.3 13.4 63 291-357 252-315 (566)
22 1kdg_A CDH, cellobiose dehydro 99.3 7.6E-13 2.6E-17 159.9 4.3 309 599-994 193-544 (546)
23 2h88_A Succinate dehydrogenase 99.2 5.2E-11 1.8E-15 144.8 15.6 57 294-355 160-218 (621)
24 2bs2_A Quinol-fumarate reducta 99.2 1.4E-10 4.9E-15 141.9 16.5 57 294-355 163-221 (660)
25 2wdq_A Succinate dehydrogenase 99.2 2.3E-10 7.8E-15 138.9 17.1 58 294-355 148-207 (588)
26 1d4d_A Flavocytochrome C fumar 99.2 2.4E-10 8.1E-15 138.6 17.0 66 291-360 257-324 (572)
27 1chu_A Protein (L-aspartate ox 99.1 3.1E-10 1.1E-14 136.4 15.8 58 294-355 143-209 (540)
28 1y56_B Sarcosine oxidase; dehy 99.1 3.5E-10 1.2E-14 129.9 13.0 61 294-364 154-214 (382)
29 3dme_A Conserved exported prot 99.1 4.6E-11 1.6E-15 136.1 4.8 66 293-365 154-220 (369)
30 3gyx_A Adenylylsulfate reducta 99.1 3.3E-10 1.1E-14 138.6 12.1 59 295-355 172-234 (662)
31 2gag_B Heterotetrameric sarcos 99.0 3.4E-10 1.1E-14 131.0 10.2 62 293-364 178-239 (405)
32 1kf6_A Fumarate reductase flav 99.0 2.8E-09 9.5E-14 129.7 16.7 58 294-356 139-199 (602)
33 1jnr_A Adenylylsulfate reducta 99.0 1.3E-09 4.3E-14 133.9 13.7 59 293-355 155-219 (643)
34 3pl8_A Pyranose 2-oxidase; sub 99.0 2.3E-10 7.9E-15 139.7 6.3 298 603-996 255-616 (623)
35 3nyc_A D-arginine dehydrogenas 99.0 1E-09 3.6E-14 125.6 10.9 60 294-364 159-218 (381)
36 3dje_A Fructosyl amine: oxygen 99.0 8.9E-10 3.1E-14 129.1 10.6 58 293-359 165-225 (438)
37 2rgh_A Alpha-glycerophosphate 99.0 3E-09 1E-13 128.8 14.1 63 296-364 195-259 (571)
38 2i0z_A NAD(FAD)-utilizing dehy 98.9 4.5E-09 1.6E-13 123.5 14.3 58 291-356 136-193 (447)
39 3da1_A Glycerol-3-phosphate de 98.9 7.9E-09 2.7E-13 124.8 15.9 66 294-365 175-242 (561)
40 2oln_A NIKD protein; flavoprot 98.9 7E-09 2.4E-13 119.8 13.6 36 89-125 3-38 (397)
41 1pj5_A N,N-dimethylglycine oxi 98.9 4.3E-09 1.5E-13 133.4 11.1 62 293-364 155-216 (830)
42 3v76_A Flavoprotein; structura 98.8 8.4E-09 2.9E-13 119.8 11.3 37 88-125 25-61 (417)
43 3nlc_A Uncharacterized protein 98.8 1.9E-08 6.4E-13 120.2 14.1 64 293-364 224-289 (549)
44 3axb_A Putative oxidoreductase 98.8 2.5E-09 8.6E-14 125.7 6.2 66 293-364 185-263 (448)
45 1ryi_A Glycine oxidase; flavop 98.8 5.3E-09 1.8E-13 119.9 8.4 36 88-124 15-50 (382)
46 2gf3_A MSOX, monomeric sarcosi 98.8 1.3E-08 4.6E-13 116.8 11.6 35 90-125 3-37 (389)
47 2e5v_A L-aspartate oxidase; ar 98.8 2.8E-08 9.7E-13 117.4 12.9 53 294-354 124-176 (472)
48 2qcu_A Aerobic glycerol-3-phos 98.7 4.5E-08 1.5E-12 116.8 14.1 59 295-360 155-215 (501)
49 3ps9_A TRNA 5-methylaminomethy 98.7 2.5E-08 8.4E-13 123.5 11.7 35 89-124 271-305 (676)
50 1rp0_A ARA6, thiazole biosynth 98.7 4.2E-08 1.4E-12 108.0 12.3 36 89-124 38-73 (284)
51 3ka7_A Oxidoreductase; structu 98.7 5.5E-08 1.9E-12 113.2 12.8 59 293-360 200-258 (425)
52 3pvc_A TRNA 5-methylaminomethy 98.7 4E-08 1.4E-12 121.8 11.9 35 89-124 263-297 (689)
53 1n4w_A CHOD, cholesterol oxida 98.7 7.8E-09 2.7E-13 123.3 4.6 264 600-994 220-501 (504)
54 3oz2_A Digeranylgeranylglycero 98.7 3.4E-08 1.2E-12 113.2 9.8 61 290-356 103-163 (397)
55 2gqf_A Hypothetical protein HI 98.7 6.9E-08 2.4E-12 111.6 12.2 35 90-125 4-38 (401)
56 3cgv_A Geranylgeranyl reductas 98.6 5.7E-08 2E-12 111.7 10.3 67 291-364 104-170 (397)
57 4dgk_A Phytoene dehydrogenase; 98.6 1.4E-07 4.7E-12 112.4 13.9 60 293-360 225-284 (501)
58 3jsk_A Cypbp37 protein; octame 98.6 1.1E-07 3.6E-12 106.4 10.7 36 89-124 78-114 (344)
59 2uzz_A N-methyl-L-tryptophan o 98.6 6E-08 2.1E-12 110.6 8.0 35 90-125 2-36 (372)
60 2zxi_A TRNA uridine 5-carboxym 98.5 9.3E-08 3.2E-12 114.8 9.0 35 89-124 26-60 (637)
61 3ces_A MNMG, tRNA uridine 5-ca 98.4 3.6E-07 1.2E-11 110.1 10.2 36 88-124 26-61 (651)
62 3i3l_A Alkylhalidase CMLS; fla 98.4 1.1E-06 3.8E-11 106.4 14.5 58 291-353 130-187 (591)
63 2gjc_A Thiazole biosynthetic e 98.4 7.2E-07 2.5E-11 99.1 11.1 36 89-124 64-100 (326)
64 3atr_A Conserved archaeal prot 98.4 2.8E-07 9.4E-12 108.5 8.1 59 291-354 102-162 (453)
65 3e1t_A Halogenase; flavoprotei 98.4 1.1E-06 3.6E-11 105.2 13.0 58 291-353 113-171 (512)
66 2gmh_A Electron transfer flavo 98.4 5E-07 1.7E-11 109.6 10.2 72 290-365 145-230 (584)
67 3nix_A Flavoprotein/dehydrogen 98.4 1.2E-06 4.1E-11 101.7 12.3 35 89-124 4-38 (421)
68 3nrn_A Uncharacterized protein 98.4 2.1E-06 7.1E-11 99.8 14.0 57 293-360 193-249 (421)
69 3cp8_A TRNA uridine 5-carboxym 98.3 1.9E-06 6.4E-11 103.9 12.3 36 88-124 19-54 (641)
70 3p1w_A Rabgdi protein; GDI RAB 98.3 2.2E-06 7.5E-11 100.3 11.7 43 85-128 15-57 (475)
71 3ihg_A RDME; flavoenzyme, anth 98.3 1.7E-05 5.9E-10 95.1 19.8 36 89-125 4-39 (535)
72 1coy_A Cholesterol oxidase; ox 98.3 2.8E-07 9.5E-12 109.9 3.4 260 600-993 225-505 (507)
73 3c4n_A Uncharacterized protein 98.2 9.4E-07 3.2E-11 102.3 7.4 36 89-124 35-71 (405)
74 4a9w_A Monooxygenase; baeyer-v 98.2 2.3E-06 7.9E-11 96.3 8.7 34 90-124 3-36 (357)
75 1mo9_A ORF3; nucleotide bindin 98.2 3.5E-05 1.2E-09 92.2 18.9 68 293-364 259-327 (523)
76 1yvv_A Amine oxidase, flavin-c 98.2 2.2E-06 7.5E-11 96.0 7.8 35 90-125 2-36 (336)
77 2cul_A Glucose-inhibited divis 98.1 1.7E-05 5.9E-10 84.2 14.0 34 90-124 3-36 (232)
78 3fmw_A Oxygenase; mithramycin, 98.1 2.8E-05 9.7E-10 93.8 16.6 36 89-125 48-83 (570)
79 3qj4_A Renalase; FAD/NAD(P)-bi 98.1 3.4E-06 1.1E-10 95.1 7.8 34 91-125 2-38 (342)
80 1k0i_A P-hydroxybenzoate hydro 98.1 2.2E-06 7.5E-11 98.6 5.9 34 90-124 2-35 (394)
81 2qa1_A PGAE, polyketide oxygen 98.1 2.6E-05 9E-10 92.6 14.6 37 87-124 8-44 (500)
82 2x3n_A Probable FAD-dependent 98.0 1.8E-05 6.1E-10 91.1 11.3 35 89-124 5-39 (399)
83 2bry_A NEDD9 interacting prote 98.0 4.1E-06 1.4E-10 99.6 5.8 36 88-124 90-125 (497)
84 3kkj_A Amine oxidase, flavin-c 98.0 3.9E-06 1.3E-10 89.5 5.1 36 90-126 2-37 (336)
85 3uox_A Otemo; baeyer-villiger 97.9 1.5E-05 5.1E-10 95.7 9.8 35 89-124 8-42 (545)
86 2qa2_A CABE, polyketide oxygen 97.9 6.2E-05 2.1E-09 89.4 14.6 36 88-124 10-45 (499)
87 4ap3_A Steroid monooxygenase; 97.9 3.4E-06 1.1E-10 101.4 3.4 36 88-124 19-54 (549)
88 3l8k_A Dihydrolipoyl dehydroge 97.9 2.4E-05 8.2E-10 92.2 10.2 35 89-124 3-37 (466)
89 3gwf_A Cyclohexanone monooxyge 97.9 3.1E-06 1.1E-10 101.5 2.2 35 89-124 7-42 (540)
90 2gv8_A Monooxygenase; FMO, FAD 97.9 3.8E-05 1.3E-09 90.0 11.3 36 89-125 5-42 (447)
91 3i6d_A Protoporphyrinogen oxid 97.9 0.00012 4E-09 85.9 15.5 37 90-127 5-47 (470)
92 2r0c_A REBC; flavin adenine di 97.9 0.00017 5.9E-09 86.7 16.9 35 89-124 25-59 (549)
93 3s5w_A L-ornithine 5-monooxyge 97.8 5.7E-05 1.9E-09 88.8 11.7 36 89-125 29-69 (463)
94 2dkh_A 3-hydroxybenzoate hydro 97.8 5.6E-05 1.9E-09 92.6 12.0 36 88-124 30-66 (639)
95 3lxd_A FAD-dependent pyridine 97.8 8.5E-05 2.9E-09 86.0 12.9 66 291-364 196-261 (415)
96 1w4x_A Phenylacetone monooxyge 97.8 2.3E-05 8E-10 94.1 7.8 36 88-124 14-49 (542)
97 3d1c_A Flavin-containing putat 97.8 3.8E-05 1.3E-09 87.1 8.9 34 90-124 4-38 (369)
98 2pyx_A Tryptophan halogenase; 97.8 9.5E-05 3.3E-09 88.4 12.4 54 291-352 177-231 (526)
99 3itj_A Thioredoxin reductase 1 97.8 2.1E-05 7E-10 87.9 6.2 36 88-124 20-55 (338)
100 3lzw_A Ferredoxin--NADP reduct 97.7 8.5E-05 2.9E-09 82.6 10.8 34 90-124 7-40 (332)
101 2xve_A Flavin-containing monoo 97.7 7.8E-05 2.7E-09 87.7 10.8 66 290-359 102-171 (464)
102 4gcm_A TRXR, thioredoxin reduc 97.7 2E-05 6.7E-10 87.4 4.4 35 89-124 5-39 (312)
103 4fk1_A Putative thioredoxin re 97.7 2.1E-05 7.1E-10 87.0 4.4 36 88-124 4-39 (304)
104 2bcg_G Secretory pathway GDP d 97.7 2.6E-05 8.8E-10 91.6 5.4 42 87-129 8-49 (453)
105 4a5l_A Thioredoxin reductase; 97.7 2E-05 6.7E-10 87.3 4.1 36 88-124 2-37 (314)
106 3fpz_A Thiazole biosynthetic e 97.6 2.7E-05 9.2E-10 87.1 4.8 38 89-126 64-102 (326)
107 3fg2_P Putative rubredoxin red 97.6 0.00028 9.4E-09 81.4 13.4 65 292-364 187-251 (404)
108 4gde_A UDP-galactopyranose mut 97.6 2E-05 6.8E-10 93.8 3.6 41 89-129 9-49 (513)
109 3k30_A Histamine dehydrogenase 97.5 0.00028 9.5E-09 87.3 12.5 37 88-125 389-425 (690)
110 1c0p_A D-amino acid oxidase; a 97.5 6.2E-05 2.1E-09 85.3 5.2 37 88-125 4-40 (363)
111 3k7m_X 6-hydroxy-L-nicotine ox 97.4 7.1E-05 2.4E-09 86.9 4.6 36 91-127 2-37 (431)
112 3rp8_A Flavoprotein monooxygen 97.4 8.3E-05 2.8E-09 85.8 4.8 37 88-125 21-57 (407)
113 1v0j_A UDP-galactopyranose mut 97.4 9.1E-05 3.1E-09 85.3 4.8 41 88-128 5-45 (399)
114 3h28_A Sulfide-quinone reducta 97.4 0.00064 2.2E-08 79.0 11.9 35 91-126 3-39 (430)
115 3g3e_A D-amino-acid oxidase; F 97.2 8.6E-05 3E-09 83.7 2.5 32 92-124 2-39 (351)
116 4b63_A L-ornithine N5 monooxyg 97.2 0.0015 5.2E-08 77.4 13.4 61 291-352 147-212 (501)
117 1i8t_A UDP-galactopyranose mut 97.2 0.00018 6.2E-09 81.8 4.6 38 90-128 1-38 (367)
118 3hdq_A UDP-galactopyranose mut 97.2 0.00021 7.2E-09 81.8 5.1 40 88-128 27-66 (397)
119 3urh_A Dihydrolipoyl dehydroge 97.2 0.00018 6.2E-09 85.2 4.4 35 89-124 24-58 (491)
120 3lad_A Dihydrolipoamide dehydr 97.2 0.00017 5.8E-09 85.1 4.1 35 89-124 2-36 (476)
121 1d5t_A Guanine nucleotide diss 97.2 0.00029 9.8E-09 82.1 5.9 42 87-129 3-44 (433)
122 1s3e_A Amine oxidase [flavin-c 97.2 0.00021 7.3E-09 85.2 4.8 39 89-128 3-41 (520)
123 3c96_A Flavin-containing monoo 97.1 0.00023 7.7E-09 82.2 4.5 35 89-124 3-38 (410)
124 4b1b_A TRXR, thioredoxin reduc 97.1 0.00021 7.3E-09 85.3 4.3 34 90-124 42-75 (542)
125 2jae_A L-amino acid oxidase; o 97.1 0.00031 1.1E-08 83.0 5.7 40 88-128 9-48 (489)
126 3cty_A Thioredoxin reductase; 97.1 0.00022 7.7E-09 79.0 4.2 37 87-124 13-49 (319)
127 2xdo_A TETX2 protein; tetracyc 97.1 0.0003 1E-08 80.8 5.3 36 89-125 25-60 (398)
128 2b9w_A Putative aminooxidase; 97.1 0.00033 1.1E-08 81.1 5.6 39 89-128 5-44 (424)
129 3o0h_A Glutathione reductase; 97.1 0.00026 9E-09 83.6 4.7 35 89-124 25-59 (484)
130 3dgz_A Thioredoxin reductase 2 97.1 0.0003 1E-08 83.3 4.8 35 89-124 5-39 (488)
131 3alj_A 2-methyl-3-hydroxypyrid 97.1 0.00036 1.2E-08 79.6 5.2 35 90-125 11-45 (379)
132 2ivd_A PPO, PPOX, protoporphyr 97.0 0.00034 1.2E-08 82.3 4.8 39 89-128 15-53 (478)
133 3nks_A Protoporphyrinogen oxid 97.0 0.00037 1.3E-08 82.0 4.9 37 91-128 3-41 (477)
134 3ics_A Coenzyme A-disulfide re 97.0 0.0018 6.1E-08 78.4 11.0 36 89-124 35-71 (588)
135 4dna_A Probable glutathione re 97.0 0.00038 1.3E-08 81.8 4.8 34 89-123 4-37 (463)
136 1sez_A Protoporphyrinogen oxid 97.0 0.00047 1.6E-08 81.7 5.4 40 88-128 11-50 (504)
137 1rsg_A FMS1 protein; FAD bindi 97.0 0.00034 1.2E-08 83.4 4.2 38 90-128 8-46 (516)
138 3ab1_A Ferredoxin--NADP reduct 97.0 0.00044 1.5E-08 78.1 4.9 37 88-125 12-48 (360)
139 3dgh_A TRXR-1, thioredoxin red 97.0 0.00041 1.4E-08 82.0 4.7 36 88-124 7-42 (483)
140 2vvm_A Monoamine oxidase N; FA 97.0 0.0004 1.4E-08 82.2 4.7 39 89-128 38-76 (495)
141 2vou_A 2,6-dihydroxypyridine h 97.0 0.00047 1.6E-08 79.2 5.1 35 89-124 4-38 (397)
142 2ywl_A Thioredoxin reductase r 97.0 0.00046 1.6E-08 69.6 4.4 33 91-124 2-34 (180)
143 2yg5_A Putrescine oxidase; oxi 97.0 0.00041 1.4E-08 81.1 4.5 38 90-128 5-42 (453)
144 3fbs_A Oxidoreductase; structu 96.9 0.00044 1.5E-08 75.4 4.4 34 90-124 2-35 (297)
145 2e1m_A L-glutamate oxidase; L- 96.9 0.00057 1.9E-08 77.6 5.3 38 88-126 42-80 (376)
146 3ic9_A Dihydrolipoamide dehydr 96.9 0.00042 1.4E-08 82.1 4.3 34 90-124 8-41 (492)
147 3f8d_A Thioredoxin reductase ( 96.9 0.0005 1.7E-08 75.9 4.3 34 89-123 14-47 (323)
148 3ihm_A Styrene monooxygenase A 96.9 0.00045 1.5E-08 80.3 4.0 34 90-124 22-55 (430)
149 3dk9_A Grase, GR, glutathione 96.9 0.00042 1.4E-08 81.8 3.8 35 89-124 19-53 (478)
150 2zbw_A Thioredoxin reductase; 96.9 0.00051 1.8E-08 76.5 4.3 35 89-124 4-38 (335)
151 3qfa_A Thioredoxin reductase 1 96.9 0.00054 1.9E-08 81.7 4.6 36 88-124 30-65 (519)
152 2r9z_A Glutathione amide reduc 96.9 0.00055 1.9E-08 80.4 4.6 35 89-124 3-37 (463)
153 2q7v_A Thioredoxin reductase; 96.9 0.00048 1.7E-08 76.5 3.9 35 89-124 7-41 (325)
154 1ges_A Glutathione reductase; 96.8 0.00054 1.9E-08 80.1 4.2 35 89-124 3-37 (450)
155 1zk7_A HGII, reductase, mercur 96.8 0.00071 2.4E-08 79.5 5.1 36 88-124 2-37 (467)
156 3hyw_A Sulfide-quinone reducta 96.8 0.0024 8.3E-08 74.1 9.5 62 292-364 203-265 (430)
157 2aqj_A Tryptophan halogenase, 96.8 0.00072 2.5E-08 81.0 5.1 35 89-124 4-41 (538)
158 3g5s_A Methylenetetrahydrofola 96.8 0.00073 2.5E-08 75.9 4.6 34 91-125 2-35 (443)
159 1ojt_A Surface protein; redox- 96.8 0.00055 1.9E-08 80.8 3.8 36 88-124 4-39 (482)
160 2hqm_A GR, grase, glutathione 96.8 0.00062 2.1E-08 80.3 4.2 35 89-124 10-44 (479)
161 1v59_A Dihydrolipoamide dehydr 96.8 0.00051 1.7E-08 81.0 3.2 35 89-124 4-38 (478)
162 3ntd_A FAD-dependent pyridine 96.8 0.0028 9.5E-08 76.3 9.8 34 91-124 2-36 (565)
163 2qae_A Lipoamide, dihydrolipoy 96.8 0.00075 2.6E-08 79.3 4.5 34 90-124 2-35 (468)
164 2q0l_A TRXR, thioredoxin reduc 96.8 0.00073 2.5E-08 74.4 4.2 32 91-123 2-34 (311)
165 3lov_A Protoporphyrinogen oxid 96.7 0.00069 2.4E-08 79.6 4.2 37 90-127 4-42 (475)
166 2weu_A Tryptophan 5-halogenase 96.7 0.00053 1.8E-08 81.5 3.1 55 291-353 175-229 (511)
167 2bi7_A UDP-galactopyranose mut 96.7 0.0011 3.6E-08 75.9 5.3 38 90-128 3-40 (384)
168 2yqu_A 2-oxoglutarate dehydrog 96.7 0.0008 2.7E-08 78.8 4.4 34 90-124 1-34 (455)
169 1onf_A GR, grase, glutathione 96.7 0.00089 3E-08 79.4 4.7 34 90-124 2-35 (500)
170 1fl2_A Alkyl hydroperoxide red 96.7 0.00091 3.1E-08 73.6 4.3 32 90-122 1-32 (310)
171 2e4g_A Tryptophan halogenase; 96.7 0.0011 3.8E-08 79.6 5.4 35 89-124 24-61 (550)
172 1dxl_A Dihydrolipoamide dehydr 96.7 0.00087 3E-08 78.8 4.3 36 88-124 4-39 (470)
173 2a87_A TRXR, TR, thioredoxin r 96.6 0.00078 2.7E-08 75.2 3.5 35 88-123 12-46 (335)
174 4dsg_A UDP-galactopyranose mut 96.6 0.0012 4.1E-08 78.0 5.2 39 89-128 8-47 (484)
175 3c4a_A Probable tryptophan hyd 96.6 0.00092 3.1E-08 76.2 4.1 34 92-125 2-36 (381)
176 1ebd_A E3BD, dihydrolipoamide 96.6 0.0009 3.1E-08 78.3 4.0 34 90-124 3-36 (455)
177 3r9u_A Thioredoxin reductase; 96.6 0.00074 2.5E-08 74.2 3.0 34 89-123 3-37 (315)
178 1vg0_A RAB proteins geranylger 96.6 0.0015 5E-08 78.9 5.4 42 87-129 5-46 (650)
179 1trb_A Thioredoxin reductase; 96.6 0.001 3.6E-08 73.4 3.8 33 90-123 5-37 (320)
180 2iid_A L-amino-acid oxidase; f 96.6 0.0012 4.1E-08 78.1 4.5 39 89-128 32-70 (498)
181 1fec_A Trypanothione reductase 96.6 0.0011 3.8E-08 78.4 4.1 33 89-122 2-35 (490)
182 1zmd_A Dihydrolipoyl dehydroge 96.5 0.0011 3.8E-08 78.0 4.0 35 89-124 5-39 (474)
183 1b37_A Protein (polyamine oxid 96.5 0.0015 5.2E-08 76.7 5.1 39 89-128 3-42 (472)
184 2wpf_A Trypanothione reductase 96.5 0.00093 3.2E-08 79.1 3.2 36 87-123 4-40 (495)
185 4hb9_A Similarities with proba 96.5 0.0016 5.3E-08 74.6 5.0 33 92-125 3-35 (412)
186 2a8x_A Dihydrolipoyl dehydroge 96.5 0.0013 4.4E-08 77.2 4.2 34 90-124 3-36 (464)
187 1vdc_A NTR, NADPH dependent th 96.5 0.0012 4E-08 73.5 3.5 32 90-122 8-39 (333)
188 1lvl_A Dihydrolipoamide dehydr 96.5 0.0012 4.1E-08 77.4 3.7 34 89-123 4-37 (458)
189 2eq6_A Pyruvate dehydrogenase 96.4 0.0014 4.9E-08 76.8 4.0 34 90-124 6-39 (464)
190 1pn0_A Phenol 2-monooxygenase; 96.4 0.0014 4.9E-08 80.4 4.0 34 90-124 8-46 (665)
191 4gut_A Lysine-specific histone 96.4 0.002 7E-08 80.0 5.0 40 88-128 334-373 (776)
192 2v3a_A Rubredoxin reductase; a 96.3 0.0026 9.1E-08 72.5 5.0 63 293-364 191-253 (384)
193 2x8g_A Thioredoxin glutathione 96.3 0.0021 7.2E-08 78.0 4.4 35 88-123 105-139 (598)
194 1xdi_A RV3303C-LPDA; reductase 96.2 0.002 6.8E-08 76.4 3.8 35 90-124 2-38 (499)
195 2vdc_G Glutamate synthase [NAD 96.2 0.0027 9.3E-08 74.2 4.8 38 89-127 121-158 (456)
196 1q1r_A Putidaredoxin reductase 96.2 0.0032 1.1E-07 73.0 5.1 63 294-364 196-260 (431)
197 1hyu_A AHPF, alkyl hydroperoxi 96.1 0.0028 9.4E-08 75.6 4.4 34 88-122 210-243 (521)
198 2cdu_A NADPH oxidase; flavoenz 96.0 0.0033 1.1E-07 73.5 4.1 35 91-125 1-36 (452)
199 1xhc_A NADH oxidase /nitrite r 96.0 0.004 1.4E-07 70.6 4.6 32 91-124 9-40 (367)
200 3oc4_A Oxidoreductase, pyridin 95.9 0.0053 1.8E-07 71.7 5.2 37 91-127 3-40 (452)
201 1o94_A Tmadh, trimethylamine d 95.9 0.0067 2.3E-07 75.3 6.1 38 89-127 388-425 (729)
202 1ps9_A 2,4-dienoyl-COA reducta 95.8 0.0063 2.1E-07 74.9 5.6 38 89-127 372-409 (671)
203 2bc0_A NADH oxidase; flavoprot 95.8 0.0037 1.3E-07 73.8 3.4 35 90-125 35-72 (490)
204 1m6i_A Programmed cell death p 95.8 0.0051 1.7E-07 72.7 4.6 38 88-125 9-47 (493)
205 2z3y_A Lysine-specific histone 95.8 0.0059 2E-07 74.9 5.0 40 88-128 105-144 (662)
206 2gag_A Heterotetrameric sarcos 95.7 0.0045 1.5E-07 79.2 3.8 62 298-363 325-392 (965)
207 3cgb_A Pyridine nucleotide-dis 95.7 0.0053 1.8E-07 72.3 4.1 37 90-126 36-73 (480)
208 1y56_A Hypothetical protein PH 95.7 0.0047 1.6E-07 73.0 3.6 36 89-126 107-142 (493)
209 3h8l_A NADH oxidase; membrane 95.7 0.0054 1.9E-07 70.5 4.0 33 92-125 3-38 (409)
210 3kd9_A Coenzyme A disulfide re 95.7 0.0073 2.5E-07 70.4 5.1 37 90-126 3-40 (449)
211 1nhp_A NADH peroxidase; oxidor 95.6 0.0059 2E-07 71.1 4.1 35 91-125 1-36 (447)
212 3iwa_A FAD-dependent pyridine 95.6 0.0069 2.4E-07 71.1 4.6 64 292-364 205-268 (472)
213 2gqw_A Ferredoxin reductase; f 95.6 0.0064 2.2E-07 69.9 4.2 36 89-125 6-43 (408)
214 3sx6_A Sulfide-quinone reducta 95.6 0.0068 2.3E-07 70.4 4.4 35 90-125 4-41 (437)
215 2xag_A Lysine-specific histone 95.5 0.0091 3.1E-07 74.8 5.5 40 88-128 276-315 (852)
216 3cty_A Thioredoxin reductase; 95.5 0.037 1.3E-06 60.9 10.0 59 301-364 202-262 (319)
217 1trb_A Thioredoxin reductase; 95.5 0.057 1.9E-06 59.2 11.3 56 299-359 194-252 (320)
218 3ab1_A Ferredoxin--NADP reduct 95.5 0.065 2.2E-06 60.0 11.9 60 300-364 213-273 (360)
219 3itj_A Thioredoxin reductase 1 95.4 0.061 2.1E-06 59.3 11.4 54 301-359 221-276 (338)
220 2v3a_A Rubredoxin reductase; a 95.4 0.071 2.4E-06 60.5 12.0 33 91-124 146-178 (384)
221 2eq6_A Pyruvate dehydrogenase 95.4 0.046 1.6E-06 63.9 10.6 33 91-124 170-202 (464)
222 3f8d_A Thioredoxin reductase ( 95.4 0.11 3.9E-06 56.6 13.2 59 300-364 201-261 (323)
223 1ebd_A E3BD, dihydrolipoamide 95.3 0.037 1.3E-06 64.5 9.2 33 91-124 171-203 (455)
224 2q0l_A TRXR, thioredoxin reduc 95.2 0.085 2.9E-06 57.6 11.5 57 301-362 191-249 (311)
225 1v59_A Dihydrolipoamide dehydr 95.2 0.035 1.2E-06 65.1 8.8 32 92-124 185-216 (478)
226 1cjc_A Protein (adrenodoxin re 95.1 0.011 3.9E-07 69.0 4.1 36 89-125 5-42 (460)
227 1gte_A Dihydropyrimidine dehyd 95.0 0.014 4.8E-07 75.2 5.1 62 298-364 379-454 (1025)
228 1q1r_A Putidaredoxin reductase 95.0 0.1 3.6E-06 60.2 12.0 32 92-124 151-182 (431)
229 3ef6_A Toluene 1,2-dioxygenase 95.0 0.058 2E-06 61.9 9.8 57 299-364 195-251 (410)
230 1fl2_A Alkyl hydroperoxide red 95.0 0.1 3.5E-06 56.9 11.3 54 302-360 193-248 (310)
231 3cgb_A Pyridine nucleotide-dis 94.9 0.038 1.3E-06 64.9 8.1 33 91-124 187-219 (480)
232 2q7v_A Thioredoxin reductase; 94.8 0.2 6.9E-06 55.0 13.1 54 301-360 200-255 (325)
233 1vdc_A NTR, NADPH dependent th 94.8 0.13 4.5E-06 56.6 11.6 61 300-364 206-268 (333)
234 2zbw_A Thioredoxin reductase; 94.7 0.16 5.6E-06 55.9 12.2 59 300-364 202-262 (335)
235 3ef6_A Toluene 1,2-dioxygenase 94.6 0.02 6.8E-07 65.9 4.4 33 91-124 3-37 (410)
236 2hqm_A GR, grase, glutathione 94.5 0.045 1.5E-06 64.3 7.2 60 299-364 236-296 (479)
237 2a8x_A Dihydrolipoyl dehydroge 94.5 0.058 2E-06 63.0 8.0 32 92-124 173-204 (464)
238 1lqt_A FPRA; NADP+ derivative, 94.4 0.016 5.6E-07 67.6 3.2 35 90-124 3-43 (456)
239 3s5w_A L-ornithine 5-monooxyge 94.3 0.6 2E-05 54.1 16.3 35 91-125 228-263 (463)
240 3ayj_A Pro-enzyme of L-phenyla 94.3 0.016 5.4E-07 70.8 2.8 36 90-126 56-100 (721)
241 2qae_A Lipoamide, dihydrolipoy 94.3 0.097 3.3E-06 61.1 9.5 59 300-364 227-288 (468)
242 1zmd_A Dihydrolipoyl dehydroge 94.2 0.08 2.7E-06 62.0 8.4 32 92-124 180-211 (474)
243 3vrd_B FCCB subunit, flavocyto 94.2 0.031 1.1E-06 63.8 4.8 34 92-125 4-38 (401)
244 3r9u_A Thioredoxin reductase; 94.1 0.28 9.6E-06 53.2 12.3 56 300-360 194-250 (315)
245 3ic9_A Dihydrolipoamide dehydr 94.1 0.13 4.3E-06 60.7 9.9 32 92-124 176-207 (492)
246 2cdu_A NADPH oxidase; flavoenz 94.1 0.084 2.9E-06 61.4 8.3 32 92-124 151-182 (452)
247 4eqs_A Coenzyme A disulfide re 93.8 0.029 9.8E-07 65.1 3.6 33 93-125 3-36 (437)
248 3iwa_A FAD-dependent pyridine 93.6 0.13 4.5E-06 60.0 8.8 34 91-124 160-193 (472)
249 1onf_A GR, grase, glutathione 93.5 0.12 4.2E-06 60.8 8.5 32 92-124 178-209 (500)
250 1hyu_A AHPF, alkyl hydroperoxi 93.5 0.2 6.9E-06 59.3 10.2 53 302-359 404-458 (521)
251 4g6h_A Rotenone-insensitive NA 93.4 0.044 1.5E-06 64.7 4.4 36 89-125 41-76 (502)
252 1ojt_A Surface protein; redox- 93.4 0.092 3.1E-06 61.6 7.1 32 92-124 187-218 (482)
253 3klj_A NAD(FAD)-dependent dehy 93.4 0.063 2.2E-06 61.1 5.4 36 89-125 8-43 (385)
254 1dxl_A Dihydrolipoamide dehydr 93.4 0.065 2.2E-06 62.6 5.6 32 92-124 179-210 (470)
255 3ntd_A FAD-dependent pyridine 93.1 0.2 6.9E-06 59.9 9.5 32 92-124 153-184 (565)
256 3lad_A Dihydrolipoamide dehydr 92.8 0.38 1.3E-05 56.2 11.0 32 92-124 182-213 (476)
257 3urh_A Dihydrolipoyl dehydroge 92.7 0.19 6.5E-06 59.0 8.3 60 299-364 249-312 (491)
258 4dna_A Probable glutathione re 92.6 0.15 5.2E-06 59.4 7.4 59 298-364 220-280 (463)
259 3dk9_A Grase, GR, glutathione 92.0 0.32 1.1E-05 56.8 9.1 32 92-124 189-220 (478)
260 3oc4_A Oxidoreductase, pyridin 92.0 0.96 3.3E-05 52.3 13.1 32 92-124 149-180 (452)
261 1xdi_A RV3303C-LPDA; reductase 91.5 0.23 7.7E-06 58.5 7.1 59 297-364 231-291 (499)
262 3o0h_A Glutathione reductase; 91.5 0.26 8.9E-06 57.8 7.6 32 92-124 193-224 (484)
263 3lzw_A Ferredoxin--NADP reduct 91.4 0.58 2E-05 51.1 9.9 59 300-364 200-260 (332)
264 2wpf_A Trypanothione reductase 91.3 0.29 1E-05 57.5 7.8 60 297-364 243-304 (495)
265 3dgz_A Thioredoxin reductase 2 91.3 0.82 2.8E-05 53.5 11.6 56 298-358 234-291 (488)
266 1fec_A Trypanothione reductase 91.3 0.23 7.9E-06 58.3 6.8 60 297-364 239-300 (490)
267 3ics_A Coenzyme A-disulfide re 91.3 0.34 1.2E-05 58.2 8.5 55 299-364 238-292 (588)
268 1m6i_A Programmed cell death p 91.3 0.62 2.1E-05 54.7 10.5 57 299-364 236-292 (493)
269 3dgh_A TRXR-1, thioredoxin red 90.6 0.97 3.3E-05 52.7 11.3 62 298-364 236-301 (483)
270 1gte_A Dihydropyrimidine dehyd 90.0 1.5 5E-05 56.4 13.0 32 92-124 334-366 (1025)
271 4g6h_A Rotenone-insensitive NA 89.6 0.41 1.4E-05 56.3 6.9 54 297-357 280-335 (502)
272 2gag_A Heterotetrameric sarcos 87.3 1.4 4.8E-05 56.2 10.1 32 92-124 286-317 (965)
273 1nhp_A NADH peroxidase; oxidor 86.9 0.42 1.4E-05 55.3 4.6 35 89-124 148-182 (447)
274 3fwz_A Inner membrane protein 86.3 0.53 1.8E-05 44.9 4.2 32 92-124 9-40 (140)
275 3llv_A Exopolyphosphatase-rela 86.2 0.54 1.8E-05 44.7 4.2 32 92-124 8-39 (141)
276 2g1u_A Hypothetical protein TM 85.6 0.63 2.1E-05 45.2 4.4 33 91-124 20-52 (155)
277 4gcm_A TRXR, thioredoxin reduc 85.2 0.67 2.3E-05 50.4 4.9 33 92-125 147-179 (312)
278 1lss_A TRK system potassium up 85.0 0.7 2.4E-05 43.4 4.4 32 92-124 6-37 (140)
279 3klj_A NAD(FAD)-dependent dehy 83.8 0.6 2.1E-05 52.9 3.8 33 92-125 148-180 (385)
280 1id1_A Putative potassium chan 83.6 0.81 2.8E-05 44.2 4.2 32 92-124 5-36 (153)
281 2yqu_A 2-oxoglutarate dehydrog 82.2 0.91 3.1E-05 52.5 4.6 33 91-124 168-200 (455)
282 4a5l_A Thioredoxin reductase; 82.1 1.2 4E-05 48.3 5.2 33 91-124 153-185 (314)
283 1lvl_A Dihydrolipoamide dehydr 82.0 0.77 2.6E-05 53.3 3.9 32 92-124 173-204 (458)
284 1xhc_A NADH oxidase /nitrite r 81.9 0.89 3E-05 51.1 4.2 32 92-124 145-176 (367)
285 3ic5_A Putative saccharopine d 81.6 1.1 3.8E-05 40.5 4.1 32 92-124 7-39 (118)
286 2hmt_A YUAA protein; RCK, KTN, 79.8 1.2 3.9E-05 42.0 3.6 32 92-124 8-39 (144)
287 1ges_A Glutathione reductase; 79.3 1.3 4.5E-05 51.2 4.6 32 92-124 169-200 (450)
288 2gqw_A Ferredoxin reductase; f 78.1 1.5 5.2E-05 49.9 4.6 33 91-124 146-178 (408)
289 3d1c_A Flavin-containing putat 77.0 1.6 5.6E-05 48.4 4.4 32 92-124 168-199 (369)
290 2r9z_A Glutathione amide reduc 76.1 1.9 6.4E-05 50.1 4.6 32 92-124 168-199 (463)
291 2bc0_A NADH oxidase; flavoprot 76.0 1.8 6.3E-05 50.5 4.6 32 92-124 196-227 (490)
292 3l4b_C TRKA K+ channel protien 75.6 1.6 5.5E-05 44.9 3.5 32 92-124 2-33 (218)
293 2gv8_A Monooxygenase; FMO, FAD 75.4 2 6.7E-05 49.5 4.6 32 92-124 214-246 (447)
294 3i83_A 2-dehydropantoate 2-red 74.8 2.2 7.6E-05 46.7 4.6 32 92-124 4-35 (320)
295 3ado_A Lambda-crystallin; L-gu 73.9 2.2 7.4E-05 46.8 4.1 32 92-124 8-39 (319)
296 3hn2_A 2-dehydropantoate 2-red 73.9 2.2 7.5E-05 46.6 4.2 32 92-124 4-35 (312)
297 3kd9_A Coenzyme A disulfide re 73.5 2.3 8E-05 48.9 4.6 32 92-124 150-181 (449)
298 3gwf_A Cyclohexanone monooxyge 73.0 2.6 8.8E-05 50.0 4.8 33 92-125 180-212 (540)
299 2xve_A Flavin-containing monoo 72.8 2.2 7.5E-05 49.5 4.1 32 92-124 199-230 (464)
300 3uox_A Otemo; baeyer-villiger 72.8 2.4 8.4E-05 50.2 4.6 33 92-125 187-219 (545)
301 2bcg_G Secretory pathway GDP d 72.7 4.4 0.00015 46.7 6.7 53 294-353 247-299 (453)
302 4eqs_A Coenzyme A disulfide re 72.1 2.3 7.9E-05 48.9 4.1 33 92-125 149-181 (437)
303 2a87_A TRXR, TR, thioredoxin r 71.5 3.1 0.00011 45.5 4.8 33 91-124 156-188 (335)
304 1d5t_A Guanine nucleotide diss 71.0 2.9 0.0001 47.9 4.6 51 294-353 239-289 (433)
305 2a9f_A Putative malic enzyme ( 70.8 6.4 0.00022 44.1 7.0 34 90-124 188-222 (398)
306 3dfz_A SIRC, precorrin-2 dehyd 70.6 3.1 0.00011 43.1 4.2 32 91-123 32-63 (223)
307 1zk7_A HGII, reductase, mercur 70.3 3.1 0.00011 48.1 4.7 32 92-124 178-209 (467)
308 1f0y_A HCDH, L-3-hydroxyacyl-C 69.7 3.3 0.00011 44.9 4.4 32 92-124 17-48 (302)
309 4e12_A Diketoreductase; oxidor 69.5 3.4 0.00012 44.4 4.4 32 92-124 6-37 (283)
310 3ghy_A Ketopantoate reductase 69.1 3.2 0.00011 45.8 4.2 31 92-123 5-35 (335)
311 1ks9_A KPA reductase;, 2-dehyd 68.9 3.8 0.00013 43.8 4.7 31 93-124 3-33 (291)
312 1kyq_A Met8P, siroheme biosynt 68.9 2.7 9.2E-05 45.0 3.4 32 91-123 14-45 (274)
313 4ap3_A Steroid monooxygenase; 68.8 2.7 9.3E-05 49.9 3.7 33 92-125 193-225 (549)
314 3c85_A Putative glutathione-re 68.8 2.5 8.6E-05 41.9 3.0 33 92-124 41-73 (183)
315 1jw9_B Molybdopterin biosynthe 68.7 3 0.0001 44.0 3.7 33 91-124 32-65 (249)
316 2raf_A Putative dinucleotide-b 68.7 4.3 0.00015 41.4 4.8 33 91-124 20-52 (209)
317 4g65_A TRK system potassium up 68.6 2.8 9.7E-05 48.5 3.7 32 92-124 5-36 (461)
318 3fg2_P Putative rubredoxin red 68.2 3.7 0.00013 46.5 4.6 34 91-125 143-176 (404)
319 3g17_A Similar to 2-dehydropan 67.8 2.6 8.8E-05 45.6 3.0 32 92-124 4-35 (294)
320 1vl6_A Malate oxidoreductase; 67.7 8.8 0.0003 42.9 7.3 34 90-124 192-226 (388)
321 3lxd_A FAD-dependent pyridine 67.5 3.9 0.00013 46.4 4.6 34 91-125 153-186 (415)
322 3l8k_A Dihydrolipoyl dehydroge 67.1 4 0.00014 47.3 4.6 32 92-124 174-205 (466)
323 3ego_A Probable 2-dehydropanto 67.1 4.3 0.00015 44.1 4.7 31 92-124 4-34 (307)
324 2x8g_A Thioredoxin glutathione 66.5 3.7 0.00013 49.2 4.3 31 92-123 288-318 (598)
325 2pq4_B Periplasmic nitrate red 66.3 1.5 5E-05 31.1 0.4 18 38-56 1-18 (35)
326 1vg0_A RAB proteins geranylger 66.3 6.9 0.00024 47.1 6.5 56 290-351 379-434 (650)
327 1lld_A L-lactate dehydrogenase 65.4 4.5 0.00015 44.1 4.4 33 91-124 8-42 (319)
328 2ew2_A 2-dehydropantoate 2-red 65.0 4.6 0.00016 43.6 4.4 32 92-124 5-36 (316)
329 3hwr_A 2-dehydropantoate 2-red 64.8 4.6 0.00016 44.2 4.3 30 92-123 21-50 (318)
330 3k96_A Glycerol-3-phosphate de 63.8 5.9 0.0002 44.1 5.0 33 91-124 30-62 (356)
331 3l9w_A Glutathione-regulated p 63.6 4.7 0.00016 46.0 4.2 32 92-124 6-37 (413)
332 1mo9_A ORF3; nucleotide bindin 62.6 5.4 0.00018 46.9 4.7 33 91-124 215-247 (523)
333 1nyt_A Shikimate 5-dehydrogena 62.6 5.6 0.00019 42.4 4.4 32 92-124 121-152 (271)
334 3oj0_A Glutr, glutamyl-tRNA re 61.6 3.8 0.00013 38.9 2.6 32 92-124 23-54 (144)
335 2y0c_A BCEC, UDP-glucose dehyd 61.4 5.6 0.00019 46.3 4.4 33 91-124 9-41 (478)
336 3fbs_A Oxidoreductase; structu 61.2 6.1 0.00021 41.9 4.4 32 91-124 142-173 (297)
337 2dpo_A L-gulonate 3-dehydrogen 60.7 5.9 0.0002 43.4 4.2 32 92-124 8-39 (319)
338 3nks_A Protoporphyrinogen oxid 60.1 5.6 0.00019 45.8 4.2 58 292-358 237-294 (477)
339 1bg6_A N-(1-D-carboxylethyl)-L 59.8 6.3 0.00022 43.5 4.4 32 92-124 6-37 (359)
340 3qfa_A Thioredoxin reductase 1 59.7 5.9 0.0002 46.5 4.3 31 92-123 212-242 (519)
341 1zcj_A Peroxisomal bifunctiona 59.7 6.5 0.00022 45.5 4.6 32 92-124 39-70 (463)
342 1jay_A Coenzyme F420H2:NADP+ o 59.3 7.6 0.00026 39.3 4.5 31 93-124 3-34 (212)
343 2aef_A Calcium-gated potassium 58.7 5 0.00017 41.5 3.1 31 92-124 11-41 (234)
344 1cjc_A Protein (adrenodoxin re 58.4 7.6 0.00026 44.8 4.9 52 301-356 269-335 (460)
345 3ond_A Adenosylhomocysteinase; 58.4 7 0.00024 45.2 4.4 32 92-124 267-298 (488)
346 1z82_A Glycerol-3-phosphate de 58.3 7.4 0.00025 42.8 4.6 34 90-124 14-47 (335)
347 4a9w_A Monooxygenase; baeyer-v 58.2 7.5 0.00026 42.4 4.6 32 91-124 164-195 (357)
348 3k6j_A Protein F01G10.3, confi 58.2 7 0.00024 45.0 4.4 32 92-124 56-87 (460)
349 1txg_A Glycerol-3-phosphate de 58.0 5.9 0.0002 43.3 3.7 29 93-122 3-31 (335)
350 3rui_A Ubiquitin-like modifier 57.8 8.2 0.00028 42.5 4.7 34 90-124 34-68 (340)
351 4dio_A NAD(P) transhydrogenase 57.5 8.1 0.00028 43.6 4.7 33 91-124 191-223 (405)
352 1h6d_A Precursor form of gluco 57.4 6.9 0.00024 44.8 4.2 35 89-123 82-118 (433)
353 2v6b_A L-LDH, L-lactate dehydr 57.2 7.8 0.00027 42.1 4.4 31 93-124 3-35 (304)
354 2ewd_A Lactate dehydrogenase,; 57.0 7.9 0.00027 42.2 4.5 32 92-124 6-38 (317)
355 3lk7_A UDP-N-acetylmuramoylala 56.8 7.7 0.00026 44.7 4.5 32 92-124 11-42 (451)
356 3gg2_A Sugar dehydrogenase, UD 56.4 7.7 0.00026 44.7 4.4 32 92-124 4-35 (450)
357 3phh_A Shikimate dehydrogenase 56.3 8.5 0.00029 41.0 4.4 32 92-124 120-151 (269)
358 1mv8_A GMD, GDP-mannose 6-dehy 56.3 7.4 0.00025 44.6 4.2 31 93-124 3-33 (436)
359 4b1b_A TRXR, thioredoxin reduc 56.3 6.4 0.00022 46.5 3.8 32 92-124 225-256 (542)
360 2ywl_A Thioredoxin reductase r 56.3 12 0.0004 36.6 5.3 61 291-364 58-118 (180)
361 1zej_A HBD-9, 3-hydroxyacyl-CO 56.2 8.8 0.0003 41.4 4.6 31 92-124 14-44 (293)
362 3g79_A NDP-N-acetyl-D-galactos 56.2 8.5 0.00029 44.6 4.7 34 92-125 20-54 (478)
363 1pzg_A LDH, lactate dehydrogen 56.1 6.7 0.00023 43.2 3.7 33 91-124 10-43 (331)
364 3nv9_A Malic enzyme; rossmann 56.0 17 0.00057 41.4 6.7 34 90-124 219-255 (487)
365 2hjr_A Malate dehydrogenase; m 55.8 8.4 0.00029 42.3 4.4 32 92-124 16-48 (328)
366 1nvt_A Shikimate 5'-dehydrogen 55.4 8.6 0.00029 41.3 4.4 30 92-123 130-159 (287)
367 2vns_A Metalloreductase steap3 55.4 8.7 0.0003 39.3 4.2 33 91-124 29-61 (215)
368 3c7a_A Octopine dehydrogenase; 55.2 7.9 0.00027 43.8 4.2 30 92-121 4-33 (404)
369 2eez_A Alanine dehydrogenase; 55.1 8.5 0.00029 43.0 4.4 33 91-124 167-199 (369)
370 2vdc_G Glutamate synthase [NAD 55.0 9.3 0.00032 44.1 4.8 32 92-124 266-298 (456)
371 1evy_A Glycerol-3-phosphate de 54.8 7.2 0.00025 43.4 3.7 32 92-124 17-48 (366)
372 1pjc_A Protein (L-alanine dehy 54.5 8.8 0.0003 42.8 4.4 33 91-124 168-200 (361)
373 1guz_A Malate dehydrogenase; o 54.4 10 0.00035 41.2 4.8 32 93-124 3-35 (310)
374 3dtt_A NADP oxidoreductase; st 54.3 9.6 0.00033 39.8 4.4 33 91-124 20-52 (245)
375 1p77_A Shikimate 5-dehydrogena 53.7 7.2 0.00025 41.6 3.3 32 92-124 121-152 (272)
376 3qha_A Putative oxidoreductase 53.6 11 0.00037 40.6 4.8 33 91-124 16-48 (296)
377 2egg_A AROE, shikimate 5-dehyd 53.5 10 0.00035 40.9 4.6 32 92-124 143-175 (297)
378 2x5o_A UDP-N-acetylmuramoylala 53.2 7 0.00024 44.8 3.4 32 92-124 7-38 (439)
379 1x13_A NAD(P) transhydrogenase 52.3 10 0.00034 43.0 4.4 33 91-124 173-205 (401)
380 1lu9_A Methylene tetrahydromet 52.2 10 0.00036 40.5 4.4 31 92-123 121-152 (287)
381 3p2y_A Alanine dehydrogenase/p 52.0 8.5 0.00029 43.1 3.6 33 91-124 185-217 (381)
382 3o38_A Short chain dehydrogena 51.9 8.2 0.00028 40.6 3.4 32 92-124 24-57 (266)
383 1o94_A Tmadh, trimethylamine d 51.9 8.6 0.00029 47.3 4.1 32 92-124 530-563 (729)
384 3ew7_A LMO0794 protein; Q8Y8U8 51.8 12 0.00041 37.7 4.6 31 93-124 3-34 (221)
385 3tnl_A Shikimate dehydrogenase 51.8 11 0.00037 41.2 4.4 31 92-123 156-187 (315)
386 2weu_A Tryptophan 5-halogenase 51.8 18 0.0006 42.2 6.6 33 91-124 3-38 (511)
387 1zud_1 Adenylyltransferase THI 51.8 12 0.00039 39.5 4.5 33 91-124 29-62 (251)
388 3jyo_A Quinate/shikimate dehyd 51.6 11 0.00038 40.4 4.4 32 92-124 129-161 (283)
389 2pv7_A T-protein [includes: ch 51.6 12 0.0004 40.5 4.6 32 92-124 23-55 (298)
390 3doj_A AT3G25530, dehydrogenas 51.1 13 0.00045 40.3 5.0 33 91-124 22-54 (310)
391 3pef_A 6-phosphogluconate dehy 51.1 11 0.00038 40.3 4.3 32 92-124 3-34 (287)
392 3mog_A Probable 3-hydroxybutyr 50.9 10 0.00034 44.1 4.2 32 92-124 7-38 (483)
393 3gpi_A NAD-dependent epimerase 50.9 11 0.00039 39.8 4.4 32 92-124 5-36 (286)
394 3g0o_A 3-hydroxyisobutyrate de 50.8 11 0.00039 40.6 4.4 33 91-124 8-40 (303)
395 1t2d_A LDH-P, L-lactate dehydr 50.7 11 0.00039 41.1 4.4 32 92-124 6-38 (322)
396 1a5z_A L-lactate dehydrogenase 50.5 9.4 0.00032 41.7 3.7 31 93-124 3-35 (319)
397 3h2s_A Putative NADH-flavin re 50.4 12 0.00041 37.8 4.4 31 93-124 3-34 (224)
398 2vhw_A Alanine dehydrogenase; 50.2 11 0.00039 42.1 4.4 33 91-124 169-201 (377)
399 2e4g_A Tryptophan halogenase; 49.9 16 0.00054 43.2 5.8 54 291-352 196-250 (550)
400 1l7d_A Nicotinamide nucleotide 49.9 12 0.00042 42.0 4.6 33 91-124 173-205 (384)
401 2f1k_A Prephenate dehydrogenas 49.8 12 0.00042 39.6 4.4 31 93-124 3-33 (279)
402 1hyh_A L-hicdh, L-2-hydroxyiso 49.7 9.9 0.00034 41.3 3.7 32 92-124 3-36 (309)
403 1hdo_A Biliverdin IX beta redu 49.6 13 0.00043 37.0 4.3 32 92-124 5-37 (206)
404 3ius_A Uncharacterized conserv 49.6 12 0.00041 39.6 4.3 32 92-124 7-38 (286)
405 3e8x_A Putative NAD-dependent 49.4 12 0.00043 38.3 4.3 32 92-124 23-55 (236)
406 3tl2_A Malate dehydrogenase; c 49.0 13 0.00043 40.6 4.4 31 92-123 10-41 (315)
407 1lqt_A FPRA; NADP+ derivative, 48.7 14 0.00049 42.4 5.1 49 302-356 265-328 (456)
408 2h78_A Hibadh, 3-hydroxyisobut 48.6 12 0.00042 40.2 4.2 32 92-124 5-36 (302)
409 3vh1_A Ubiquitin-like modifier 48.6 14 0.00048 43.8 4.9 34 90-124 327-361 (598)
410 4a7p_A UDP-glucose dehydrogena 48.5 14 0.00048 42.4 4.9 34 90-124 8-41 (446)
411 4gx0_A TRKA domain protein; me 48.5 12 0.00043 44.2 4.6 34 91-125 349-382 (565)
412 1yj8_A Glycerol-3-phosphate de 48.0 9.3 0.00032 42.7 3.3 32 92-124 23-61 (375)
413 4ezb_A Uncharacterized conserv 48.0 14 0.00048 40.2 4.6 32 92-124 26-58 (317)
414 3h8v_A Ubiquitin-like modifier 48.0 12 0.00039 40.4 3.8 34 90-124 36-70 (292)
415 4gsl_A Ubiquitin-like modifier 47.8 14 0.00047 43.9 4.7 34 90-124 326-360 (615)
416 3don_A Shikimate dehydrogenase 47.8 12 0.00041 40.0 3.9 32 92-124 119-151 (277)
417 2uyy_A N-PAC protein; long-cha 47.7 13 0.00043 40.4 4.2 33 91-124 31-63 (316)
418 4dll_A 2-hydroxy-3-oxopropiona 47.7 13 0.00044 40.6 4.3 33 91-124 32-64 (320)
419 1x0v_A GPD-C, GPDH-C, glycerol 47.5 8.9 0.0003 42.3 3.0 32 92-124 10-48 (354)
420 1yqg_A Pyrroline-5-carboxylate 47.5 12 0.00039 39.4 3.7 31 93-124 3-34 (263)
421 2dkn_A 3-alpha-hydroxysteroid 47.3 15 0.00052 37.8 4.6 31 93-124 4-35 (255)
422 1leh_A Leucine dehydrogenase; 47.3 14 0.00047 41.2 4.4 31 92-123 175-205 (364)
423 1pjq_A CYSG, siroheme synthase 47.2 13 0.00044 42.9 4.3 31 92-123 14-44 (457)
424 3fbt_A Chorismate mutase and s 47.1 14 0.00047 39.6 4.2 32 92-124 124-156 (282)
425 3u62_A Shikimate dehydrogenase 47.0 14 0.00048 38.9 4.2 32 92-124 110-142 (253)
426 3pwz_A Shikimate dehydrogenase 47.0 15 0.0005 39.2 4.4 32 92-124 122-154 (272)
427 2ivd_A PPO, PPOX, protoporphyr 46.9 16 0.00054 42.0 5.1 51 301-359 247-299 (478)
428 3ojo_A CAP5O; rossmann fold, c 46.9 11 0.00039 42.9 3.7 32 92-124 13-44 (431)
429 3d4o_A Dipicolinate synthase s 46.9 14 0.00049 39.7 4.4 32 92-124 157-188 (293)
430 3o8q_A Shikimate 5-dehydrogena 46.6 16 0.00054 39.2 4.6 32 92-124 128-160 (281)
431 2g5c_A Prephenate dehydrogenas 46.5 14 0.00049 39.1 4.3 31 93-124 4-36 (281)
432 4huj_A Uncharacterized protein 46.4 8.5 0.00029 39.5 2.4 33 91-124 24-57 (220)
433 2hk9_A Shikimate dehydrogenase 46.2 12 0.00042 39.8 3.7 32 92-124 131-162 (275)
434 3t4e_A Quinate/shikimate dehyd 46.2 15 0.00051 40.0 4.4 31 92-123 150-181 (312)
435 2rir_A Dipicolinate synthase, 45.9 15 0.00051 39.6 4.4 32 92-124 159-190 (300)
436 3pdu_A 3-hydroxyisobutyrate de 45.6 11 0.00038 40.2 3.3 32 92-124 3-34 (287)
437 1vpd_A Tartronate semialdehyde 45.6 15 0.0005 39.4 4.2 32 92-124 7-38 (299)
438 3c24_A Putative oxidoreductase 45.3 15 0.00053 39.1 4.3 32 92-124 13-45 (286)
439 2gf2_A Hibadh, 3-hydroxyisobut 45.3 15 0.00052 39.2 4.3 31 93-124 3-33 (296)
440 1pj3_A NAD-dependent malic enz 45.2 25 0.00086 40.9 6.2 33 91-124 285-328 (564)
441 3eag_A UDP-N-acetylmuramate:L- 45.1 16 0.00056 39.9 4.6 32 92-124 6-38 (326)
442 1ur5_A Malate dehydrogenase; o 45.0 16 0.00053 39.8 4.3 32 92-124 4-36 (309)
443 2pd4_A Enoyl-[acyl-carrier-pro 44.9 18 0.00061 38.2 4.8 31 93-124 9-42 (275)
444 2axq_A Saccharopine dehydrogen 44.8 14 0.00049 42.6 4.2 33 92-124 25-57 (467)
445 3ggo_A Prephenate dehydrogenas 44.6 16 0.00054 39.8 4.3 32 92-124 35-68 (314)
446 1o0s_A NAD-ME, NAD-dependent m 44.5 26 0.0009 41.0 6.2 34 90-124 320-364 (605)
447 3cky_A 2-hydroxymethyl glutara 44.4 17 0.00057 39.0 4.4 33 91-124 5-37 (301)
448 3dqp_A Oxidoreductase YLBE; al 44.2 17 0.00059 36.6 4.3 31 93-124 3-34 (219)
449 2qyt_A 2-dehydropantoate 2-red 44.2 10 0.00036 40.9 2.8 31 92-122 10-45 (317)
450 2wtb_A MFP2, fatty acid multif 44.1 15 0.00051 45.0 4.4 32 92-124 314-345 (725)
451 1w4x_A Phenylacetone monooxyge 44.0 13 0.00044 43.9 3.7 33 92-125 188-220 (542)
452 2dvm_A Malic enzyme, 439AA lon 44.0 15 0.0005 42.0 4.0 29 92-121 188-219 (439)
453 4eez_A Alcohol dehydrogenase 1 43.8 34 0.0012 37.4 7.0 33 92-124 166-198 (348)
454 3h5n_A MCCB protein; ubiquitin 43.8 15 0.0005 40.8 4.0 34 90-124 118-152 (353)
455 3r6d_A NAD-dependent epimerase 43.4 18 0.00062 36.5 4.4 31 93-124 8-40 (221)
456 3vtf_A UDP-glucose 6-dehydroge 43.3 14 0.00047 42.4 3.6 34 90-124 21-54 (444)
457 1dlj_A UDP-glucose dehydrogena 43.0 17 0.00058 41.1 4.4 30 93-124 3-32 (402)
458 2jae_A L-amino acid oxidase; o 43.0 30 0.001 39.8 6.7 43 304-352 252-294 (489)
459 2zyd_A 6-phosphogluconate dehy 42.7 17 0.00059 42.1 4.5 33 91-124 16-48 (480)
460 1gq2_A Malic enzyme; oxidoredu 42.6 28 0.00094 40.5 5.9 33 91-124 283-326 (555)
461 2aqj_A Tryptophan halogenase, 42.5 25 0.00085 41.2 5.9 55 291-353 167-221 (538)
462 2d5c_A AROE, shikimate 5-dehyd 42.3 18 0.00061 38.1 4.2 32 92-124 118-149 (263)
463 3l6d_A Putative oxidoreductase 41.9 18 0.00061 39.1 4.2 33 91-124 10-42 (306)
464 1cyd_A Carbonyl reductase; sho 41.8 19 0.00066 36.9 4.3 31 93-124 10-41 (244)
465 3gvi_A Malate dehydrogenase; N 41.7 19 0.00065 39.4 4.4 33 91-124 8-41 (324)
466 3k31_A Enoyl-(acyl-carrier-pro 41.7 19 0.00064 38.6 4.3 32 92-124 32-66 (296)
467 2o3j_A UDP-glucose 6-dehydroge 41.6 15 0.00051 42.7 3.7 33 92-124 11-44 (481)
468 1i36_A Conserved hypothetical 41.4 16 0.00056 38.2 3.8 29 93-122 3-31 (264)
469 1pgj_A 6PGDH, 6-PGDH, 6-phosph 41.4 18 0.0006 42.0 4.3 32 92-124 3-34 (478)
470 3qsg_A NAD-binding phosphogluc 41.4 16 0.00054 39.7 3.7 32 91-123 25-57 (312)
471 3dhn_A NAD-dependent epimerase 41.3 17 0.00059 36.7 3.8 32 92-124 6-38 (227)
472 2o7s_A DHQ-SDH PR, bifunctiona 41.0 12 0.00043 43.8 2.9 31 92-123 366-396 (523)
473 3zwc_A Peroxisomal bifunctiona 41.0 19 0.00064 44.1 4.6 32 92-124 318-349 (742)
474 3gvp_A Adenosylhomocysteinase 41.0 20 0.00067 40.7 4.4 32 92-124 222-253 (435)
475 3vps_A TUNA, NAD-dependent epi 40.7 20 0.00068 38.4 4.4 33 92-125 9-42 (321)
476 2rcy_A Pyrroline carboxylate r 40.6 17 0.00058 38.0 3.7 32 92-124 6-41 (262)
477 3oig_A Enoyl-[acyl-carrier-pro 40.6 21 0.00073 37.3 4.5 31 93-124 10-43 (266)
478 3orf_A Dihydropteridine reduct 40.6 23 0.00077 36.9 4.6 31 93-124 25-56 (251)
479 4fs3_A Enoyl-[acyl-carrier-pro 40.5 21 0.0007 37.4 4.3 31 93-124 9-42 (256)
480 2o2s_A Enoyl-acyl carrier redu 40.4 21 0.00071 38.6 4.5 29 93-122 12-43 (315)
481 3qvo_A NMRA family protein; st 40.4 20 0.00069 36.8 4.2 32 92-124 25-58 (236)
482 1oju_A MDH, malate dehydrogena 40.3 17 0.00058 39.2 3.7 31 93-124 3-35 (294)
483 2cvz_A Dehydrogenase, 3-hydrox 40.1 21 0.00072 37.8 4.4 30 93-124 4-33 (289)
484 1npy_A Hypothetical shikimate 40.1 20 0.00067 38.2 4.1 31 92-123 121-152 (271)
485 2pgd_A 6-phosphogluconate dehy 39.9 21 0.0007 41.5 4.5 32 92-124 4-35 (482)
486 3pid_A UDP-glucose 6-dehydroge 39.9 21 0.00072 40.7 4.5 32 91-124 37-68 (432)
487 3d3w_A L-xylulose reductase; u 39.9 22 0.00074 36.6 4.3 31 93-124 10-41 (244)
488 2h7i_A Enoyl-[acyl-carrier-pro 39.9 19 0.00066 37.8 4.0 31 93-124 10-43 (269)
489 3ce6_A Adenosylhomocysteinase; 39.9 20 0.00069 41.6 4.4 32 92-124 276-307 (494)
490 1qsg_A Enoyl-[acyl-carrier-pro 39.8 19 0.00066 37.7 4.0 31 93-124 12-45 (265)
491 1edz_A 5,10-methylenetetrahydr 39.7 22 0.00076 38.7 4.4 32 91-123 178-210 (320)
492 1c1d_A L-phenylalanine dehydro 39.7 21 0.00072 39.5 4.3 31 92-123 177-207 (355)
493 3pqe_A L-LDH, L-lactate dehydr 39.5 18 0.00061 39.7 3.7 31 92-123 7-39 (326)
494 3k30_A Histamine dehydrogenase 39.4 17 0.00059 44.2 3.9 32 92-124 525-558 (690)
495 3rwb_A TPLDH, pyridoxal 4-dehy 39.4 22 0.00077 36.8 4.4 31 93-124 9-40 (247)
496 2izz_A Pyrroline-5-carboxylate 39.1 21 0.0007 38.9 4.2 33 91-124 23-59 (322)
497 1ff9_A Saccharopine reductase; 38.8 21 0.00073 40.9 4.4 32 92-124 5-36 (450)
498 3ktd_A Prephenate dehydrogenas 38.8 21 0.00073 39.3 4.2 32 92-124 10-41 (341)
499 2p4q_A 6-phosphogluconate dehy 38.8 23 0.00079 41.2 4.7 33 91-124 11-43 (497)
500 3p7m_A Malate dehydrogenase; p 38.8 23 0.00077 38.7 4.4 32 92-124 7-39 (321)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=5.1e-86 Score=795.70 Aligned_cols=306 Identities=32% Similarity=0.567 Sum_probs=272.8
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCC--CCCcccchhhcccc-CcCCCCCccCCCCCCcchhhccCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDEN--EISDIPSLAGYLQL-SELDWKYKTEPPMGDSAYCLAMVGD 166 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~--~~~~~p~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~ 166 (1049)
+|||||||||+|||++|.||+|+++.+|||||||+... ....+|..+..... +.++|.|.++|| ..++++
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq-------~~~~~r 74 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQ-------AGYNGR 74 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCC-------GGGTTC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccC-------CCCCCc
Confidence 59999999999999999999997799999999998763 34566766655554 789999999999 688999
Q ss_pred ccccCCcceecCcHHHHhhhhhcCChhhhHHHHhc-CCCCCCccChHHHHHHHhhcccCcc-------cCCCCCCCCCcc
Q psy4102 167 RCNWPRGKVLGGSSVLNAMIYVRGNKNDYDQWERL-GNPGWGYKDVLPYFKKSEDNRNEYL-------LRTPYHSKGGYL 238 (1049)
Q Consensus 167 ~~~~~~G~~lGGsS~in~~~~~r~~~~d~d~w~~~-G~~~Ws~~~l~py~~k~E~~~~~~~-------~~~~~~g~~G~l 238 (1049)
.+.|++||+|||||++|+|+|.|+++.|||.|++. |+.+|+|++++|||+|+|++..+.. .+..+||.+||+
T Consensus 75 ~~~~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~ 154 (566)
T 3fim_B 75 SIAYPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSV 154 (566)
T ss_dssp CCBCCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSE
T ss_pred eEeccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCe
Confidence 99999999999999999999999999999999988 9999999999999999999976421 133689999999
Q ss_pred cccCCCCCcHHHHHHHHHHHhc--CCCC-CCCCCCCcccccccccccCCCCccchhHHchHHhhhcCCcEEecCceEEEE
Q psy4102 239 TVQESPWHSPLAAAFVKAGEEL--GYEN-RDINGERQTGFMIAQGTIRRGSRCSTSKAFLRPIRLRKNLHIAMETQALRL 315 (1049)
Q Consensus 239 ~v~~~~~~~~~~~~~~~a~~~~--G~~~-~d~~~~~~~G~~~~~~~~~~g~r~s~~~~~L~~~~~~~nl~I~~~t~V~~I 315 (1049)
.+....+..+....|+++++++ |++. .|++++...|+++++.++.+|.|+++..+||.++.+++|++|+++|.|+||
T Consensus 155 ~v~~~~~~~~~~~~~~~a~~~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rI 234 (566)
T 3fim_B 155 SISLPGFPTPLDDRVLATTQEQSEEFFFNPDMGTGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKL 234 (566)
T ss_dssp EEBSCSSCCTHHHHHHHHHHHTHHHHCBCSCGGGSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEE
T ss_pred eeecCCCCCHHHHHHHHHHHHHhcCCCccCCCCCCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEE
Confidence 9999988899999999999999 9988 778888888999999888899999999999999989999999999999999
Q ss_pred EeccCC-CCCeEEEEEEEeC-C-eEEEEEcCeEEEEcCCCcchHHHHHhCCCCCccccccCCCCccccCc-ccccccccc
Q psy4102 316 LFDKSG-PVPKAVGIEILRD-G-RKHIIRAKKEIISSAGAINSPQLLMVSGIGPEEHLQGLNIPIIKNLS-VGHNLQDHV 391 (1049)
Q Consensus 316 l~d~~~-~~~rv~GV~~~~~-g-~~~~v~A~k~VILAAGa~~Tp~LLl~SGIGp~~~L~~~gI~v~~dlp-VG~nl~DH~ 391 (1049)
+++... +.++|+||++..+ | +.++|+|+||||||||+|+||||||+|||||+++|+++||+|++|+| ||+|||||+
T Consensus 235 l~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~ 314 (566)
T 3fim_B 235 VNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHL 314 (566)
T ss_dssp ECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCE
T ss_pred EeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCc
Confidence 997210 1269999999864 5 77899999999999999999999999999999999999999999999 999999999
Q ss_pred CCCcEEEEEcCc
Q psy4102 392 GLGGLTFIVDGP 403 (1049)
Q Consensus 392 ~~~~~~~~~~~~ 403 (1049)
.+ .+.|.++.+
T Consensus 315 ~~-~~~~~~~~~ 325 (566)
T 3fim_B 315 LL-PAAFFVNSN 325 (566)
T ss_dssp EE-CCEEEESCS
T ss_pred cc-eEEEEeCCC
Confidence 87 477776544
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=6.4e-83 Score=769.45 Aligned_cols=306 Identities=29% Similarity=0.451 Sum_probs=268.4
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCC---CCCcccchhhccccCcCCCCCccCCCCCCcchhhccC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDEN---EISDIPSLAGYLQLSELDWKYKTEPPMGDSAYCLAMV 164 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~---~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 164 (1049)
+++|||||||||+|||++|.||+|+++.+|||||||+... .....|..+....++.++|.|.++|+ ..+
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q--------~~~ 88 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVEL--------ATN 88 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCC--------TTT
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCcccccc--------CCC
Confidence 4679999999999999999999998899999999998422 12334555555567889999999998 357
Q ss_pred CCccccCCcceecCcHHHHhhhhhcCChhhhHHHHhcCCC-CCCccChHHHHHHHhhcccCc--------ccCCCCCCCC
Q psy4102 165 GDRCNWPRGKVLGGSSVLNAMIYVRGNKNDYDQWERLGNP-GWGYKDVLPYFKKSEDNRNEY--------LLRTPYHSKG 235 (1049)
Q Consensus 165 ~~~~~~~~G~~lGGsS~in~~~~~r~~~~d~d~w~~~G~~-~Ws~~~l~py~~k~E~~~~~~--------~~~~~~~g~~ 235 (1049)
++.+.|+|||+|||||++|+|+|.|+++.|||.|++.|+. +|+|++++|||+|+|++..+. ..+..+||.+
T Consensus 89 ~r~~~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~ 168 (583)
T 3qvp_A 89 NQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVN 168 (583)
T ss_dssp SCCCEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSS
T ss_pred CCeeeccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCC
Confidence 8899999999999999999999999999999999999988 999999999999999987542 1245689999
Q ss_pred CcccccCC---CCCcHHHHHHHHHHHhcCCCC-CCCCCCCcccccccccccC-CCCccchhHHchHHhhhcCCcEEecCc
Q psy4102 236 GYLTVQES---PWHSPLAAAFVKAGEELGYEN-RDINGERQTGFMIAQGTIR-RGSRCSTSKAFLRPIRLRKNLHIAMET 310 (1049)
Q Consensus 236 G~l~v~~~---~~~~~~~~~~~~a~~~~G~~~-~d~~~~~~~G~~~~~~~~~-~g~r~s~~~~~L~~~~~~~nl~I~~~t 310 (1049)
||+.+.+. ....+..+.|.++++++|++. .|++++...|+.+++.++. +|.|++++.+||.++.+|+|++|+++|
T Consensus 169 Gpl~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a 248 (583)
T 3qvp_A 169 GTVHAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQ 248 (583)
T ss_dssp SSEEEBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSC
T ss_pred CCEEecCCCCcccCCHHHHHHHHHHHHcCCCcCCCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCC
Confidence 99999876 345788999999999999998 7889888889888887775 689999999999998899999999999
Q ss_pred eEEEEEeccCCCCCeEEEEEEE-eCCeEEEEEcCeEEEEcCCCcchHHHHHhCCCCCccccccCCCCccccCcccccccc
Q psy4102 311 QALRLLFDKSGPVPKAVGIEIL-RDGRKHIIRAKKEIISSAGAINSPQLLMVSGIGPEEHLQGLNIPIIKNLSVGHNLQD 389 (1049)
Q Consensus 311 ~V~~Il~d~~~~~~rv~GV~~~-~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGIGp~~~L~~~gI~v~~dlpVG~nl~D 389 (1049)
.|+||++++++++++|+||++. .+|+.++++|+||||||||+|+||||||+|||||+++|+++||+|++|||||+||||
T Consensus 249 ~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLPVG~NLqD 328 (583)
T 3qvp_A 249 YVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGLNLQD 328 (583)
T ss_dssp EEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCTTCCBBC
T ss_pred EEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCccccchhh
Confidence 9999999842225799999998 578889999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEEEEEcC
Q psy4102 390 HVGLGGLTFIVDG 402 (1049)
Q Consensus 390 H~~~~~~~~~~~~ 402 (1049)
|+.+ .+.|.++.
T Consensus 329 H~~~-~~~~~~~~ 340 (583)
T 3qvp_A 329 QTTA-TVRSRITS 340 (583)
T ss_dssp CEEE-EEEEEECG
T ss_pred Cccc-eEEEEecC
Confidence 9987 47776653
No 3
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=3e-81 Score=755.81 Aligned_cols=324 Identities=32% Similarity=0.533 Sum_probs=268.0
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCC---CCCcccchhhccccCcCCCCCccCCCCCCcchhhccC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDEN---EISDIPSLAGYLQLSELDWKYKTEPPMGDSAYCLAMV 164 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~---~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 164 (1049)
.++|||||||||+|||++|.||+|+++.+|||||||+... ....+|..+....++.++|.|.++ ++
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~-----------~~ 72 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT-----------MV 72 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE-----------EE
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE-----------EC
Confidence 4579999999999999999999999668999999998732 234567777777788999999876 23
Q ss_pred CCccc------cCCcceecCcHHHHhhhhhcCChhhhHHHHhcCCCCCCccChHHHHHHHhhcccCcc---cCCCCCCCC
Q psy4102 165 GDRCN------WPRGKVLGGSSVLNAMIYVRGNKNDYDQWERLGNPGWGYKDVLPYFKKSEDNRNEYL---LRTPYHSKG 235 (1049)
Q Consensus 165 ~~~~~------~~~G~~lGGsS~in~~~~~r~~~~d~d~w~~~G~~~Ws~~~l~py~~k~E~~~~~~~---~~~~~~g~~ 235 (1049)
++.+. |+|||+|||||++|+|+|.|+.+.|||.|++.|+.+|+|++++|||+|.|++..+.. .+..+||.+
T Consensus 73 ~r~~~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~ 152 (577)
T 3q9t_A 73 RRDDYERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGG 152 (577)
T ss_dssp EETTEEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCS
T ss_pred CccccccccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCC
Confidence 55555 999999999999999999999999999999999999999999999999999876421 123478999
Q ss_pred CcccccCCCCCc---HHHHHHHHHHHhcCCCC-CCCCCCCcccccccccccCCCCccchhHHchHHhhhcCCcEEecCce
Q psy4102 236 GYLTVQESPWHS---PLAAAFVKAGEELGYEN-RDINGERQTGFMIAQGTIRRGSRCSTSKAFLRPIRLRKNLHIAMETQ 311 (1049)
Q Consensus 236 G~l~v~~~~~~~---~~~~~~~~a~~~~G~~~-~d~~~~~~~G~~~~~~~~~~g~r~s~~~~~L~~~~~~~nl~I~~~t~ 311 (1049)
||+.+....+.. +..+.+.++++++|++. .|++++...|+.+.+.++.+|.|+++. .|+ .+++|++|++++.
T Consensus 153 Gpl~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~s~~-~~l---~~r~Nl~v~~~a~ 228 (577)
T 3q9t_A 153 GPIPISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCCDTIYRGQRSGSF-LFV---KNKPNITIVPEVH 228 (577)
T ss_dssp CSEEEEECCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSCCCEEEECEESEETTEECCGG-GGS---SSCTTEEEECSEE
T ss_pred CCEEeeCCCCCcccchHHHHHHHHHHHcCCCcCCCCCCCCcCeEEeecceecCCeEeeHH-HHH---hcCCCeEEEcCcE
Confidence 999998876543 47888999999999998 678888888988888888888888765 343 5689999999999
Q ss_pred EEEEEeccCCCCCeEEEEEEEeC-CeEEEEEcCeEEEEcCCCcchHHHHHhCCCCCccccccCCCCccccCc-ccccccc
Q psy4102 312 ALRLLFDKSGPVPKAVGIEILRD-GRKHIIRAKKEIISSAGAINSPQLLMVSGIGPEEHLQGLNIPIIKNLS-VGHNLQD 389 (1049)
Q Consensus 312 V~~Il~d~~~~~~rv~GV~~~~~-g~~~~v~A~k~VILAAGa~~Tp~LLl~SGIGp~~~L~~~gI~v~~dlp-VG~nl~D 389 (1049)
|+||++++ ++++++||++.+. |+.++++|+||||||||+|+||+|||+|||||+++|+++||+|++|+| ||+||||
T Consensus 229 v~ri~~~~--~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~D 306 (577)
T 3q9t_A 229 SKRLIINE--ADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMD 306 (577)
T ss_dssp EEEEEEET--TTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBC
T ss_pred EEEEEEeC--CCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhc
Confidence 99999983 2469999999874 888899999999999999999999999999999999999999999999 9999999
Q ss_pred ccCCCcEEEEEcCccccccc--ch--hhhHHHHHHhhccCCCcc
Q psy4102 390 HVGLGGLTFIVDGPVTFKKE--RY--QTLSVALQYILNERGPLT 429 (1049)
Q Consensus 390 H~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~G~~~ 429 (1049)
|+.+ .+.|.++.+...... .. .......+|..+++||++
T Consensus 307 H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~ 349 (577)
T 3q9t_A 307 HPGV-PFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVG 349 (577)
T ss_dssp CEEE-EEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGG
T ss_pred Ccce-eEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCcc
Confidence 9987 477777654321100 00 112233367777777776
No 4
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=7.1e-74 Score=697.17 Aligned_cols=304 Identities=29% Similarity=0.457 Sum_probs=262.5
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCCC--Cc-ccchhhccccCcCCCCCccCCCCCCcchhhccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENEI--SD-IPSLAGYLQLSELDWKYKTEPPMGDSAYCLAMVG 165 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~~--~~-~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 165 (1049)
.+|||||||+|.+|+++|.+|++++|.+|+|||+|+..... .. +|..+.....+.++|.|.++|. +++
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p~---------~~~ 93 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVPL---------INN 93 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCCC---------TTS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCccccccccccC---------CCC
Confidence 56999999999999999999999559999999999865422 23 5655544555678999988763 467
Q ss_pred CccccCCcceecCcHHHHhhhhhcCChhhhHHHHhc-CCCCCCccChHHHHHHHhhcccCcc--------cCCCCCCCCC
Q psy4102 166 DRCNWPRGKVLGGSSVLNAMIYVRGNKNDYDQWERL-GNPGWGYKDVLPYFKKSEDNRNEYL--------LRTPYHSKGG 236 (1049)
Q Consensus 166 ~~~~~~~G~~lGGsS~in~~~~~r~~~~d~d~w~~~-G~~~Ws~~~l~py~~k~E~~~~~~~--------~~~~~~g~~G 236 (1049)
+.+.|++||+|||+|++|+|+|+|+.+.||+.|++. |+.+|+|++++|||+|+|++..+.. .+..+|+.+|
T Consensus 94 ~~~~~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~G 173 (587)
T 1gpe_A 94 RTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNG 173 (587)
T ss_dssp CCCEECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSS
T ss_pred ceeeeeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCC
Confidence 889999999999999999999999999999999988 9999999999999999999986521 2456789999
Q ss_pred cccccCC---CCCcHHHHHHHHHHHhcCCCC-CCCCCCCcccccccccccC-CCCccchhHHchHHhhhcCCcEEecCce
Q psy4102 237 YLTVQES---PWHSPLAAAFVKAGEELGYEN-RDINGERQTGFMIAQGTIR-RGSRCSTSKAFLRPIRLRKNLHIAMETQ 311 (1049)
Q Consensus 237 ~l~v~~~---~~~~~~~~~~~~a~~~~G~~~-~d~~~~~~~G~~~~~~~~~-~g~r~s~~~~~L~~~~~~~nl~I~~~t~ 311 (1049)
|+.+.++ ....+..+.|.++++++|++. .+++++...|+++++.++. .|.|+++..+||.++++++|++|++++.
T Consensus 174 pl~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~ 253 (587)
T 1gpe_A 174 TVQSGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQM 253 (587)
T ss_dssp SEEEBCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCE
T ss_pred CEEEccCCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCE
Confidence 9998855 356788999999999999988 6788888888888877654 6899999999998888899999999999
Q ss_pred EEEEEeccCCCCCeEEEEEEE-eCCeEEEEEcCeEEEEcCCCcchHHHHHhCCCCCccccccCCCCccccCccccccccc
Q psy4102 312 ALRLLFDKSGPVPKAVGIEIL-RDGRKHIIRAKKEIISSAGAINSPQLLMVSGIGPEEHLQGLNIPIIKNLSVGHNLQDH 390 (1049)
Q Consensus 312 V~~Il~d~~~~~~rv~GV~~~-~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGIGp~~~L~~~gI~v~~dlpVG~nl~DH 390 (1049)
|++|++++++++++++||++. .+|+.++|+|+|+||||||+|+||+||++|||||+++|+++||+|++|+|||+|||||
T Consensus 254 v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlPVG~nL~DH 333 (587)
T 1gpe_A 254 VGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGINMQDQ 333 (587)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECCTTCSBBCC
T ss_pred EEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCCCCcchhcC
Confidence 999999732112599999998 6888889999889999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEEcC
Q psy4102 391 VGLGGLTFIVDG 402 (1049)
Q Consensus 391 ~~~~~~~~~~~~ 402 (1049)
+.+ .+.+.+++
T Consensus 334 ~~~-~~~~~~~~ 344 (587)
T 1gpe_A 334 TTT-TVSSRASS 344 (587)
T ss_dssp EEE-EEEEEECG
T ss_pred ccc-ceEEEeCC
Confidence 987 47776654
No 5
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.2e-71 Score=672.87 Aligned_cols=300 Identities=34% Similarity=0.546 Sum_probs=261.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC--CCcccchhhccccCcCCCCCccCCCCCCcchhhccCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE--ISDIPSLAGYLQLSELDWKYKTEPPMGDSAYCLAMVGD 166 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~--~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 166 (1049)
.+|||||||+|.+|+++|.+|+++++.+|+|||+|+.... ....|..+....++.++|.|.++|+ .. +++
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~-------~~-~~~ 83 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQ-------EN-GNS 83 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCC-------SS-SCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCccccccccccc-------CC-CCc
Confidence 4699999999999999999999987899999999986543 1334544433335678999999998 34 778
Q ss_pred ccccCCcceecCcHHHHhhhhhcCChhhhHHHHh-cCCCCCCccChHHHHHHHhhcccCcccCCCCCCCCCcccccCCCC
Q psy4102 167 RCNWPRGKVLGGSSVLNAMIYVRGNKNDYDQWER-LGNPGWGYKDVLPYFKKSEDNRNEYLLRTPYHSKGGYLTVQESPW 245 (1049)
Q Consensus 167 ~~~~~~G~~lGGsS~in~~~~~r~~~~d~d~w~~-~G~~~Ws~~~l~py~~k~E~~~~~~~~~~~~~g~~G~l~v~~~~~ 245 (1049)
.+.|++|++|||+|.+|+|.|.|+.+.||+.|.+ .|+.+|+|++++|||+++|++..+. ....+||..|++.+.....
T Consensus 84 ~~~~~rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~-~~~~~~g~~Gpl~v~~~~~ 162 (546)
T 2jbv_A 84 FMRHARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAG-PDAPHHGDSGPVHLMNVPP 162 (546)
T ss_dssp TCEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCB-TTBTTSCBSCSEEEEECCS
T ss_pred eEEeecccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCC-CccccCCCCCCEEEecCCC
Confidence 8999999999999999999999999999999988 8999999999999999999987621 1146888899999987777
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCC--cccccccccccC-CCCccchhHHchHHhhhcCCcEEecCceEEEEEeccCCC
Q psy4102 246 HSPLAAAFVKAGEELGYENRDINGER--QTGFMIAQGTIR-RGSRCSTSKAFLRPIRLRKNLHIAMETQALRLLFDKSGP 322 (1049)
Q Consensus 246 ~~~~~~~~~~a~~~~G~~~~d~~~~~--~~G~~~~~~~~~-~g~r~s~~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~ 322 (1049)
..+..+.|.++++++|++..+.++.. ..|+.+|+.++. +|.|+++..+||.++.+++|++|++++.|++|++++
T Consensus 163 ~~~~~~~~~~a~~~~G~~~~d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~--- 239 (546)
T 2jbv_A 163 KDPTGVALLDACEQAGIPRAKFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDA--- 239 (546)
T ss_dssp CCHHHHHHHHHHHHTTCCBCCSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECT---
T ss_pred CCHHHHHHHHHHHHCCCCccCCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECC---
Confidence 78999999999999999877777766 778888888888 899999999999887778999999999999999982
Q ss_pred CCeEEEEEEEeC--CeEEEEEcCeEEEEcCCCcchHHHHHhCCCCCccccccCCCCccccCc-cccccccccCCCcEEEE
Q psy4102 323 VPKAVGIEILRD--GRKHIIRAKKEIISSAGAINSPQLLMVSGIGPEEHLQGLNIPIIKNLS-VGHNLQDHVGLGGLTFI 399 (1049)
Q Consensus 323 ~~rv~GV~~~~~--g~~~~v~A~k~VILAAGa~~Tp~LLl~SGIGp~~~L~~~gI~v~~dlp-VG~nl~DH~~~~~~~~~ 399 (1049)
+++++||++..+ |+..+|+|+|+||||||+|+||+||++|||||+++|+++||++++|+| ||+|||||+.+. +.+.
T Consensus 240 ~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~-~~~~ 318 (546)
T 2jbv_A 240 DRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGV-VQFE 318 (546)
T ss_dssp TSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECC-EEEE
T ss_pred CCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccce-EEEE
Confidence 379999999865 888889998799999999999999999999999999999999999999 999999999874 6665
Q ss_pred Ec
Q psy4102 400 VD 401 (1049)
Q Consensus 400 ~~ 401 (1049)
++
T Consensus 319 ~~ 320 (546)
T 2jbv_A 319 AK 320 (546)
T ss_dssp ES
T ss_pred ec
Confidence 54
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=9.5e-71 Score=665.93 Aligned_cols=290 Identities=36% Similarity=0.613 Sum_probs=254.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC-CCcccchhhccccCcCCCCCccCCCCCCcchhhccCCCc
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE-ISDIPSLAGYLQLSELDWKYKTEPPMGDSAYCLAMVGDR 167 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~-~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 167 (1049)
.+|||||||||+|||++|.||||+++.||||||||+.... ....|..+..+.++.++|.|.++|+ ..++++.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~-------~~~~~~~ 88 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQ-------AGTAGRA 88 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCB-------GGGTTBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCcccccc-------CCCCCCe
Confidence 4799999999999999999999987899999999986543 3345666667778899999999999 6789999
Q ss_pred cccCCcceecCcHHHHhhhhhcCChhhhHHHHh-cCCCCCCccChHHHHHHHhhcccCcccCCCCCCCCCcccccCCC-C
Q psy4102 168 CNWPRGKVLGGSSVLNAMIYVRGNKNDYDQWER-LGNPGWGYKDVLPYFKKSEDNRNEYLLRTPYHSKGGYLTVQESP-W 245 (1049)
Q Consensus 168 ~~~~~G~~lGGsS~in~~~~~r~~~~d~d~w~~-~G~~~Ws~~~l~py~~k~E~~~~~~~~~~~~~g~~G~l~v~~~~-~ 245 (1049)
+.|++|++|||+|++|+|.|+|+.+.||+.|.+ .++.+|+|++++|||++.|.+... ....++..|+..+.... .
T Consensus 89 ~~~~rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~---~~~~~~~~g~~~~~~~~~~ 165 (526)
T 3t37_A 89 HHWARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLG---GDGIHGKGGPLPIHLPADE 165 (526)
T ss_dssp CEECCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTT---TSSSSCSSCSEECBCCSTT
T ss_pred EeccCccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCC---CccccCcCCCcCccccccc
Confidence 999999999999999999999999999999965 577899999999999999988653 44567777887766543 3
Q ss_pred CcHHHHHHHHHHHhcCCCC-CCCCCCCcccccccccccCCCCccchhHHchHH-hhhcCCcEEecCceEEEEEeccCCCC
Q psy4102 246 HSPLAAAFVKAGEELGYEN-RDINGERQTGFMIAQGTIRRGSRCSTSKAFLRP-IRLRKNLHIAMETQALRLLFDKSGPV 323 (1049)
Q Consensus 246 ~~~~~~~~~~a~~~~G~~~-~d~~~~~~~G~~~~~~~~~~g~r~s~~~~~L~~-~~~~~nl~I~~~t~V~~Il~d~~~~~ 323 (1049)
..++.+.|.++++++|++. .+.+.....++..+..++..|.|.++..+|+.+ ...++|++|++++.|++|+++ +
T Consensus 166 ~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~----~ 241 (526)
T 3t37_A 166 VSPLARAFIEAGASLGLPRLEGHNSGEMIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLE----G 241 (526)
T ss_dssp SCHHHHHHHHHHHHTTCCBCSSSCSSCCBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEE----T
T ss_pred CCHHHHHHHHHHHHcCCCcccCCCCCcccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEec----C
Confidence 4688999999999999987 666777777777888888889999988888755 456899999999999999998 5
Q ss_pred CeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCCCCccccccCCCCccccCc-cccccccccCC
Q psy4102 324 PKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGIGPEEHLQGLNIPIIKNLS-VGHNLQDHVGL 393 (1049)
Q Consensus 324 ~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGIGp~~~L~~~gI~v~~dlp-VG~nl~DH~~~ 393 (1049)
++++||++...++...+.| |+||||||+|+||+|||+|||||+.+|+++||++++|+| ||+|||||+..
T Consensus 242 ~~a~gv~~~~~~~~~~~~a-~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~ 311 (526)
T 3t37_A 242 NQVRSLEVVGRQGSAEVFA-DQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLG 311 (526)
T ss_dssp TEEEEEEEEETTEEEEEEE-EEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEE
T ss_pred CeEEEEEEEecCceEEEee-cceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCcccccccccccc
Confidence 7999999998888888888 589999999999999999999999999999999999999 99999999865
No 7
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=7.1e-62 Score=586.39 Aligned_cols=272 Identities=28% Similarity=0.401 Sum_probs=205.6
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCCC--CcccchhhccccCcCCCCCccCCCCCCcchhhccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENEI--SDIPSLAGYLQLSELDWKYKTEPPMGDSAYCLAMVG 165 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~~--~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 165 (1049)
..+|||||||||+|||++|.||+| |.+|||||||+..... ...+..+..... ..+| |.+.+| ..+.+
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~-~~~~-~~t~~q-------~~~~~ 92 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQ-QEDD-GKTPVE-------RFVSE 92 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHH-SCCC-SSSSEE-------EEECT
T ss_pred cCcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhcc-CCCc-CcCCCc-------cccCC
Confidence 457999999999999999999999 7999999999864221 122222111111 1235 666666 34567
Q ss_pred CccccCCcceecCcHHHHhhhhhcCChhhhHHHHhcCCCCCCccChHHHHHHHhhcccCcccCCCCCCCCCcccccCCCC
Q psy4102 166 DRCNWPRGKVLGGSSVLNAMIYVRGNKNDYDQWERLGNPGWGYKDVLPYFKKSEDNRNEYLLRTPYHSKGGYLTVQESPW 245 (1049)
Q Consensus 166 ~~~~~~~G~~lGGsS~in~~~~~r~~~~d~d~w~~~G~~~Ws~~~l~py~~k~E~~~~~~~~~~~~~g~~G~l~v~~~~~ 245 (1049)
+.+.+++|++|||+|.+|+|.|.|+.+.||+.+ | .+|+|++++|||+++|+.... .+.
T Consensus 93 ~~~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~~~------------------~~~ 150 (536)
T 1ju2_A 93 DGIDNVRGRVLGGTSIINAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTIVY------------------KPN 150 (536)
T ss_dssp TSCEEEEECBTTGGGGTSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHHCB------------------CCC
T ss_pred CcceeecceeccccccccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhcccCC------------------CCC
Confidence 788899999999999999999999999999742 2 259999999999999987531 012
Q ss_pred CcHHHHHHHHHHHhcCCCCC-CC----CCCCcccccccccccCCCCccchhHHchHHhhhcCCcEEecCceEEEEEeccC
Q psy4102 246 HSPLAAAFVKAGEELGYENR-DI----NGERQTGFMIAQGTIRRGSRCSTSKAFLRPIRLRKNLHIAMETQALRLLFDKS 320 (1049)
Q Consensus 246 ~~~~~~~~~~a~~~~G~~~~-d~----~~~~~~G~~~~~~~~~~g~r~s~~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~ 320 (1049)
..+....+.++++++|++.. .. ..+...|... ...+|.|+++.. |+ +.++++|++|++++.|++|++++.
T Consensus 151 ~~~~~~~~~~a~~~~G~~~~~~~~~~~~~g~~~g~~~---~~~~g~r~s~~~-~~-~~~~~~~~~v~~~~~v~~i~~~~~ 225 (536)
T 1ju2_A 151 SQSWQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGST---FDNKGTRHAADE-LL-NKGNSNNLRVGVHASVEKIIFSNA 225 (536)
T ss_dssp CCHHHHHHHHHHHHTTCCCEEEECCBCCSEEEECEES---BCTTSBBCCGGG-GG-GGSCTTTEEEEESCEEEEEEECCS
T ss_pred CCcHHHHHHHHHHHcCCCCCCCcccCCCCCceeeeEE---ECCCCeEecHHH-hh-hhhcCCCcEEEeCCEEEEEEECCC
Confidence 34667788899999998541 11 1111112111 124678887776 66 456789999999999999999831
Q ss_pred CCCCeEEEEEEEe-CCeEEEEE--cCeEEEEcCCCcchHHHHHhCCCCCccccccCCCCccccCc-cccccccccCCCcE
Q psy4102 321 GPVPKAVGIEILR-DGRKHIIR--AKKEIISSAGAINSPQLLMVSGIGPEEHLQGLNIPIIKNLS-VGHNLQDHVGLGGL 396 (1049)
Q Consensus 321 ~~~~rv~GV~~~~-~g~~~~v~--A~k~VILAAGa~~Tp~LLl~SGIGp~~~L~~~gI~v~~dlp-VG~nl~DH~~~~~~ 396 (1049)
++++++||++.+ +|+.++++ ++|+||||||+|+||+||++|||||+++|+++||+|++|+| ||+|||||+.+ .+
T Consensus 226 -~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~-~~ 303 (536)
T 1ju2_A 226 -PGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRN-FI 303 (536)
T ss_dssp -SSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEE-EE
T ss_pred -CCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcce-eE
Confidence 124999999985 67665664 66899999999999999999999999999999999999999 99999999976 34
Q ss_pred EEE
Q psy4102 397 TFI 399 (1049)
Q Consensus 397 ~~~ 399 (1049)
.+.
T Consensus 304 ~~~ 306 (536)
T 1ju2_A 304 NIL 306 (536)
T ss_dssp EEC
T ss_pred EEE
Confidence 443
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=1e-58 Score=562.37 Aligned_cols=280 Identities=25% Similarity=0.399 Sum_probs=206.7
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCCCC--cccchhh-ccccCcCC--------CCCccCCCCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENEIS--DIPSLAG-YLQLSELD--------WKYKTEPPMGD 156 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~~~--~~p~~~~-~~~~~~~~--------w~~~~~~~~~~ 156 (1049)
+.+|||||||||++|+++|.+|+++ |.+|+|||+|+...... .....+. ......++ |.. ..+.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~-g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~--- 79 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEA-GKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTD-SNPF--- 79 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTC-SCCT---
T ss_pred CCceeEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcC-CCcc---
Confidence 3579999999999999999999998 99999999998543110 0000000 00000000 100 0000
Q ss_pred cchhhccCCCccccCCcceecCcHHHHhhhhhcCChhhhHH---HHhcCCCCCCccChHHHHHHHhhcccCcccCCCCCC
Q psy4102 157 SAYCLAMVGDRCNWPRGKVLGGSSVLNAMIYVRGNKNDYDQ---WERLGNPGWGYKDVLPYFKKSEDNRNEYLLRTPYHS 233 (1049)
Q Consensus 157 ~~~~~~~~~~~~~~~~G~~lGGsS~in~~~~~r~~~~d~d~---w~~~G~~~Ws~~~l~py~~k~E~~~~~~~~~~~~~g 233 (1049)
.......+++|+++||+|.+|++.|+|+.+.||+. |. .+|+|++ +||+++|+.... ...+.
T Consensus 80 ------~~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~----~~w~~~~--p~~~k~e~~~~~----~~~~~ 143 (546)
T 1kdg_A 80 ------WWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWP----SSWTNHA--PYTSKLSSRLPS----TDHPS 143 (546)
T ss_dssp ------TBCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCC----GGGSCCH--HHHHHHHHHSCC----BSCCS
T ss_pred ------ccccccccccceeecccccccceEEecCChHHhcCcccCc----cccCccc--HHHHHHHhcCCC----CccCC
Confidence 01123567899999999999999999999999987 82 5788888 999999986542 11222
Q ss_pred CCCcccccCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCcccccccccccCCCCccchhHHchHHhhhcCCcEEecCc
Q psy4102 234 KGGYLTVQESPWHSPLAAAFVKAGEELGYENRDIN---GERQTGFMIAQGTIRRGSRCSTSKAFLRPIRLRKNLHIAMET 310 (1049)
Q Consensus 234 ~~G~l~v~~~~~~~~~~~~~~~a~~~~G~~~~d~~---~~~~~G~~~~~~~~~~g~r~s~~~~~L~~~~~~~nl~I~~~t 310 (1049)
..|+. +..+....+.++++++|++..+.+ .....|+..++.++.+|.|+++..+|+.++.+++|++|++++
T Consensus 144 ~~g~~------~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~g~R~s~~~~~l~~~~~~~~~~i~~~~ 217 (546)
T 1kdg_A 144 TDGQR------YLEQSFNVVSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNV 217 (546)
T ss_dssp TTSCC------CSCHHHHHHHHHHHTTTCEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEECSC
T ss_pred CCCCc------cCCHHHHHHHHHHHHCCCCcCCccCCcCCCCcEEeeeeeccCCCcccCHHHHHHHHHhhCCCcEEEeCC
Confidence 33321 345667888899999998653322 123446667777778899999999999888888999999999
Q ss_pred eEEEEEeccCCCCCeEEEEEEEe--CCe--EEEEEcCeEEEEcCCCcchHHHHHhCCCCCccccccC------CCCcc--
Q psy4102 311 QALRLLFDKSGPVPKAVGIEILR--DGR--KHIIRAKKEIISSAGAINSPQLLMVSGIGPEEHLQGL------NIPII-- 378 (1049)
Q Consensus 311 ~V~~Il~d~~~~~~rv~GV~~~~--~g~--~~~v~A~k~VILAAGa~~Tp~LLl~SGIGp~~~L~~~------gI~v~-- 378 (1049)
.|++|+++ +++++||++.+ +|+ +.++++.|+||||||+++||+||++|||||+++|+++ ||+|+
T Consensus 218 ~V~~i~~~----~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~ 293 (546)
T 1kdg_A 218 MVSNVVRN----GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQ 293 (546)
T ss_dssp CEEEEEEE----TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCG
T ss_pred EEEEEEEe----CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccc
Confidence 99999998 47999999865 354 3456566799999999999999999999999999999 69985
Q ss_pred ---ccCccccccccccCCCcEEEE
Q psy4102 379 ---KNLSVGHNLQDHVGLGGLTFI 399 (1049)
Q Consensus 379 ---~dlpVG~nl~DH~~~~~~~~~ 399 (1049)
+|+|||+|||||+.+. +.+.
T Consensus 294 ~~~~dlpVG~nL~DH~~~~-~~~~ 316 (546)
T 1kdg_A 294 NQWINLPVGMNAQDNPSIN-LVFT 316 (546)
T ss_dssp GGCBCCCTTTTBBCCCCEE-EEEE
T ss_pred cccccCCcccCcccCccee-EEEe
Confidence 8999999999999863 5554
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=8.1e-54 Score=513.34 Aligned_cols=277 Identities=19% Similarity=0.191 Sum_probs=208.9
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC-C--CcccchhhccccCcCCCCCccCCCCCCc--------
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE-I--SDIPSLAGYLQLSELDWKYKTEPPMGDS-------- 157 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~-~--~~~p~~~~~~~~~~~~w~~~~~~~~~~~-------- 157 (1049)
.+||+||||+|++|+++|.+|++. |.+|+|||+|+.... . ...+... ......++|.|.++|+....
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~~ 81 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA-GVQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVVN 81 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGGC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCCCCCCCcccccccc-cccCcccccccccccccccccccccccc
Confidence 469999999999999999999996 999999999985431 1 1222111 11234578999988762000
Q ss_pred ---chhhc----cCCCccccCCcceecCcHHHHhhhhhcCChhhhHHHHhcCCCCCCccChH-HHHHHHhhcccCcccCC
Q psy4102 158 ---AYCLA----MVGDRCNWPRGKVLGGSSVLNAMIYVRGNKNDYDQWERLGNPGWGYKDVL-PYFKKSEDNRNEYLLRT 229 (1049)
Q Consensus 158 ---~~~~~----~~~~~~~~~~G~~lGGsS~in~~~~~r~~~~d~d~w~~~G~~~Ws~~~l~-py~~k~E~~~~~~~~~~ 229 (1049)
..+.+ .+++.+.|++|++|||+|++|+|+|+|+.+.||+.|. .+|.|++++ |||+++|++..+.....
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~~ 157 (504)
T 1n4w_A 82 RNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSMLRVNHIDT 157 (504)
T ss_dssp CBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCCH
T ss_pred ccccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHHhCCCCCCc
Confidence 01111 2678899999999999999999999999999999996 579999999 99999999875421111
Q ss_pred CCCCCCCcccccCCCCCcHHHHHHHHHHHhcCC-----CC-CCCCCC---------CcccccccccccCCCCccchhHHc
Q psy4102 230 PYHSKGGYLTVQESPWHSPLAAAFVKAGEELGY-----EN-RDINGE---------RQTGFMIAQGTIRRGSRCSTSKAF 294 (1049)
Q Consensus 230 ~~~g~~G~l~v~~~~~~~~~~~~~~~a~~~~G~-----~~-~d~~~~---------~~~G~~~~~~~~~~g~r~s~~~~~ 294 (1049)
.++ ..+ + ..+..+.|.++++++|+ +. .++++. .+..++.|...|.+| |+++..+|
T Consensus 158 ~~~-~~~-------~-~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~ 227 (504)
T 1n4w_A 158 KWF-EDT-------E-WYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTY 227 (504)
T ss_dssp HHH-HHC-------G-GGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTH
T ss_pred ccc-cCC-------C-cchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHHH
Confidence 111 000 0 24678889999999999 43 333211 122334455667889 99999999
Q ss_pred hHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe-CC---eEEEEEcCeEEEEcCCCcchHHHHHhCC-CCCccc
Q psy4102 295 LRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DG---RKHIIRAKKEIISSAGAINSPQLLMVSG-IGPEEH 369 (1049)
Q Consensus 295 L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~-~g---~~~~v~A~k~VILAAGa~~Tp~LLl~SG-IGp~~~ 369 (1049)
|.++.+++|++|++++.|++|++++ ++++++||++.. +| +..+++|+ +||||||+|+||+||++|| ||
T Consensus 228 l~~a~~~~n~~i~~~~~V~~i~~~~--~g~~~~gV~~~~~~g~~~~~~~v~A~-~VIlaaG~~~s~~lL~~Sg~ig---- 300 (504)
T 1n4w_A 228 LAAALGTGKVTIQTLHQVKTIRQTK--DGGYALTVEQKDTDGKLLATKEISCR-YLFLGAGSLGSTELLVRARDTG---- 300 (504)
T ss_dssp HHHHHHTTSEEEEESEEEEEEEECT--TSSEEEEEEEECTTCCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTT----
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECC--CCCEEEEEEEeCCCCccceeEEEeeC-EEEEccCCCCCHHHHHhccccC----
Confidence 9888888899999999999999983 124899999974 56 56789996 8999999999999999999 97
Q ss_pred cccCCCCccccCccccccccccCC
Q psy4102 370 LQGLNIPIIKNLSVGHNLQDHVGL 393 (1049)
Q Consensus 370 L~~~gI~v~~dlpVG~nl~DH~~~ 393 (1049)
||+++.+ .||+||+||+.+
T Consensus 301 ----~i~~~~~-~VG~nl~dh~~~ 319 (504)
T 1n4w_A 301 ----TLPNLNS-EVGAGWGPNGNI 319 (504)
T ss_dssp ----SSTTCCT-TTTCCBBCTTCE
T ss_pred ----CCCCCCh-hhccccccCCcc
Confidence 6776632 299999999975
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=1.2e-51 Score=494.74 Aligned_cols=273 Identities=19% Similarity=0.222 Sum_probs=207.1
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCCCCcccc---hhhcc-ccCcCCCCCccCCCCCCc------
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENEISDIPS---LAGYL-QLSELDWKYKTEPPMGDS------ 157 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~~~~~p~---~~~~~-~~~~~~w~~~~~~~~~~~------ 157 (1049)
..+||+||||+|++|+++|.+|++. |.+|+|||+|..... ..|. +.... ....++|.|.++||....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~~ 85 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQA-GIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFGI 85 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCC--CCCcccccccccccccccccccccccccccccccccc
Confidence 4579999999999999999999996 999999999985431 1221 11111 234689999998862100
Q ss_pred --chhhcc------CCCccccCCcceecCcHHHHhhhhhcCChhhhHHHHhcCCCCCCccChH-HHHHHHhhcccCcccC
Q psy4102 158 --AYCLAM------VGDRCNWPRGKVLGGSSVLNAMIYVRGNKNDYDQWERLGNPGWGYKDVL-PYFKKSEDNRNEYLLR 228 (1049)
Q Consensus 158 --~~~~~~------~~~~~~~~~G~~lGGsS~in~~~~~r~~~~d~d~w~~~G~~~Ws~~~l~-py~~k~E~~~~~~~~~ 228 (1049)
...... +++.+.|++|++|||+|++|+|+|+|+.+.||+.|. .+|.|++++ |||+++|++..+....
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~ 161 (507)
T 1coy_A 86 NKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTGLGVNNID 161 (507)
T ss_dssp CCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCC
T ss_pred ccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHHhCCCCCC
Confidence 001223 678899999999999999999999999999999996 479999999 9999999987642110
Q ss_pred CCCCCCCCcccccCCCC-CcHHHHHHHHHHHhcCC-----CC-CCCCCC---------CcccccccccccCCCCccchhH
Q psy4102 229 TPYHSKGGYLTVQESPW-HSPLAAAFVKAGEELGY-----EN-RDINGE---------RQTGFMIAQGTIRRGSRCSTSK 292 (1049)
Q Consensus 229 ~~~~g~~G~l~v~~~~~-~~~~~~~~~~a~~~~G~-----~~-~d~~~~---------~~~G~~~~~~~~~~g~r~s~~~ 292 (1049)
.... ... ..+..+.|.++++++|+ +. .++++. .+..++.|...|.+| |+++..
T Consensus 162 -------~~~~---~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~~~ 230 (507)
T 1coy_A 162 -------QAWF---ESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-KKSLDK 230 (507)
T ss_dssp -------HHHH---HHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-BCCTTT
T ss_pred -------Cccc---cccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCC-CcChHH
Confidence 0000 011 24677889999999999 44 233221 122344555667889 999999
Q ss_pred HchHHhhhcCCcEEecCceEEEEEeccCCCCC-eEEEEEEEe-CC---eEEEEEcCeEEEEcCCCcchHHHHHhCC-CCC
Q psy4102 293 AFLRPIRLRKNLHIAMETQALRLLFDKSGPVP-KAVGIEILR-DG---RKHIIRAKKEIISSAGAINSPQLLMVSG-IGP 366 (1049)
Q Consensus 293 ~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~-rv~GV~~~~-~g---~~~~v~A~k~VILAAGa~~Tp~LLl~SG-IGp 366 (1049)
+||.++.+++|++|++++.|++|++++ ++ +++||++.. +| +..+++|+ +||||||+|+||+||++|| ||
T Consensus 231 ~~l~~a~~~~n~~i~~~~~v~~i~~~~---~g~~~~gV~~~~~~g~~~~~~~~~A~-~VIlaaGa~~sp~lL~~Sg~iG- 305 (507)
T 1coy_A 231 TYLAQAAATGKLTITTLHRVTKVAPAT---GSGYSVTMEQIDEQGNVVATKVVTAD-RVFFAAGSVGTSKLLVSMKAQG- 305 (507)
T ss_dssp THHHHHHHTTCEEEECSEEEEEEEECS---SSSEEEEEEEECTTSCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECC---CCCEEEEEEEeCCCCcccccEEEEeC-EEEEccCccCCHHHHHhcccCC-
Confidence 999888888899999999999999982 34 899999976 56 46789996 8999999999999999999 98
Q ss_pred ccccccCCCCccccCc--cccccccccCC
Q psy4102 367 EEHLQGLNIPIIKNLS--VGHNLQDHVGL 393 (1049)
Q Consensus 367 ~~~L~~~gI~v~~dlp--VG~nl~DH~~~ 393 (1049)
++| |++ ||+||+||+..
T Consensus 306 -------~lp---nl~d~VG~~l~~h~~~ 324 (507)
T 1coy_A 306 -------HLP---NLSSQVGEGWGNNGNI 324 (507)
T ss_dssp -------SST---TSCTTTTCCBBCTTEE
T ss_pred -------CCC---ccChhhCCccccCCcc
Confidence 234 443 99999999863
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=2.5e-37 Score=377.71 Aligned_cols=281 Identities=15% Similarity=0.134 Sum_probs=169.1
Q ss_pred cCCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCCCCcccc---hh--------------hccccCc------
Q psy4102 87 LLRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENEISDIPS---LA--------------GYLQLSE------ 143 (1049)
Q Consensus 87 ~~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~~~~~p~---~~--------------~~~~~~~------ 143 (1049)
+..+||+||||||.+|+++|..|++. |.+|+|||+++.......-.. .. .......
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~-G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~ 121 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGA-GYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTL 121 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCC
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhC-CCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhcccccccc
Confidence 44579999999999999999999998 999999999876542110000 00 0000000
Q ss_pred -------CCCCCccCCCCCCcchhhccCCCcccc----CCcceecCcHHHHhhhhhcCChhhhHHHHhcCCCCC---Ccc
Q psy4102 144 -------LDWKYKTEPPMGDSAYCLAMVGDRCNW----PRGKVLGGSSVLNAMIYVRGNKNDYDQWERLGNPGW---GYK 209 (1049)
Q Consensus 144 -------~~w~~~~~~~~~~~~~~~~~~~~~~~~----~~G~~lGGsS~in~~~~~r~~~~d~d~w~~~G~~~W---s~~ 209 (1049)
.+|.-....- ...+ ......+.+ ..+..+||.+.+|.+...|..+.+ .+.. ..+| .++
T Consensus 122 ~~~~~~~~~~~~~~v~l---~~g~-~~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e--~~~~--l~~~~v~~~~ 193 (623)
T 3pl8_A 122 VVDTLSPTSWQASTFFV---RNGS-NPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQ--RPLL--VKDDADADDA 193 (623)
T ss_dssp CCCCSCTTSCCCSSCCS---CTTC-CTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGG--SCCS--STTCHHHHHH
T ss_pred ccccccccccccCcEEe---ccCC-CcccccchhhhhhcccccccCcceeeccccccCChHH--hhhh--hcccCccChh
Confidence 0111100000 0000 000001111 245667899999988888776642 1111 1222 345
Q ss_pred ChHHHHHHHhhcccCcccCCCCCCCCCcccccCCCCCcHHH-HHHHHHHHhcCCCCCCCCCCCcccccccccccCCCCcc
Q psy4102 210 DVLPYFKKSEDNRNEYLLRTPYHSKGGYLTVQESPWHSPLA-AAFVKAGEELGYENRDINGERQTGFMIAQGTIRRGSRC 288 (1049)
Q Consensus 210 ~l~py~~k~E~~~~~~~~~~~~~g~~G~l~v~~~~~~~~~~-~~~~~a~~~~G~~~~d~~~~~~~G~~~~~~~~~~g~r~ 288 (1049)
++.++|.+.+....... +. +..... ......+.........+.... ..... ......|+
T Consensus 194 ~l~~~~~~~~~l~~vgg---------~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~p-~a~~~---~~~~~~r~ 253 (623)
T 3pl8_A 194 EWDRLYTKAESYFQTGT---------DQ-------FKESIRHNLVLNKLTEEYKGQRDFQQIP-LAATR---RSPTFVEW 253 (623)
T ss_dssp HHHHHHHHHHHHHTEES---------CT-------TTTCHHHHHHHHHHHHHTTTTSCCEECC-EEEEE---EETTEEEE
T ss_pred hHHHHHHHHHHhccccc---------cc-------ccCccccccchHHHHHhhhhcccccccc-hhhcc---CCCCcccc
Confidence 67788888877654210 00 111111 111111111100000000000 00000 00122366
Q ss_pred chhHHchHHh------hhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHHH
Q psy4102 289 STSKAFLRPI------RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLM 360 (1049)
Q Consensus 289 s~~~~~L~~~------~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LLl 360 (1049)
++..+++.+. .+++|++|++++.|++|++++ ++++++||++.+ +|+..++.|+ +||||+|++.+|++|+
T Consensus 254 s~~~~~l~~~~~l~~~~~~~nv~v~~~~~V~~i~~~~--~~~~v~GV~~~~~~~g~~~~i~A~-~VIlaaG~~~s~~lL~ 330 (623)
T 3pl8_A 254 SSANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNA--LNSEIESLHIHDLISGDRFEIKAD-VYVLTAGAVHNTQLLV 330 (623)
T ss_dssp CCHHHHCCCCCEEETTEEEEEEEEECSEEEEEEEECT--TSSCEEEEEEEETTTCCEEEECEE-EEEECSCTTHHHHHHH
T ss_pred chHHhhhhhhhcchhhccCCCEEEEeCCEEEEEEEEC--CCCEEEEEEEEEcCCCcEEEEECC-EEEEcCCCcCCHHHHH
Confidence 7777788666 567799999999999999973 235999999986 6777889995 8999999999999999
Q ss_pred hCCCCCccccccCCCCccccCc-cccccccccCCCcEEEEEcC
Q psy4102 361 VSGIGPEEHLQGLNIPIIKNLS-VGHNLQDHVGLGGLTFIVDG 402 (1049)
Q Consensus 361 ~SGIGp~~~L~~~gI~v~~dlp-VG~nl~DH~~~~~~~~~~~~ 402 (1049)
+|||||+.+|+.+||++ |+| ||+||+||+.+ .+.+.+++
T Consensus 331 ~sgiG~~~~l~~~~i~~--~l~~vG~nl~dh~~~-~~~~~~~~ 370 (623)
T 3pl8_A 331 NSGFGQLGRPNPANPPE--LLPSLGSYITEQSLV-FCQTVMST 370 (623)
T ss_dssp TTTSSCCSSCCTTSCCS--SCTTTTBSCBCCCEE-EEEEEECH
T ss_pred hcCCCccccccccCCCC--CCcccccchhhCcCc-eEEEEECC
Confidence 99999999999999999 999 99999999987 46676654
No 12
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=99.85 E-value=9.4e-23 Score=245.39 Aligned_cols=318 Identities=21% Similarity=0.247 Sum_probs=204.9
Q ss_pred ccHHHHhhhcccCCCCCceEEE------EEeec---CC-CeeeEEEEEEc-C-e------eEEEEEeeccccchHHHHHh
Q psy4102 599 LRDRIFNTLYKPLINAETWTIL------PLLLR---PL-STGNGIRIVFE-N-L------DKVLVIRRFSCPSCHILVLS 660 (1049)
Q Consensus 599 ~r~~~~~~y~~p~~~r~nl~v~------~il~~---~~-sratGV~~~~~-~-~------~keVilsaGai~SPqILlL~ 660 (1049)
.|++++.+|+.|+..|+||+|+ +|+|+ .. .+++||+|..+ + . +|||||++|+|+||||||+
T Consensus 205 ~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~l- 283 (566)
T 3fim_B 205 QRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQL- 283 (566)
T ss_dssp EECCHHHHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHH-
T ss_pred EEcCHHHHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHh-
Confidence 4778889999998889999877 48998 23 58999999875 3 2 5899999999999999999
Q ss_pred cCCCCHHHHhhCCCCccccCC-cccccccccccceeEEEEcCccccchhhHHHHhhccccCCCCccccccccchhhhhhc
Q psy4102 661 SGIGPEEHLQGLNIPIIKNLS-VGHNLQDHVGLGGLTFIVDGPVTFKKERYQVLLCLSERTDDSTYSTYTNTLFPRYIRL 739 (1049)
Q Consensus 661 SGIGP~~~L~~~GIpvv~DLP-VG~NLqDH~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1049)
|||||+++|+++||||++||| ||+|||||+.+... |..+...+....... .......+..|..
T Consensus 284 SGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~~~~~-~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~- 347 (566)
T 3fim_B 284 SGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLLPAA-FFVNSNQTFDNIFRD--------------SSEFNVDLDQWTN- 347 (566)
T ss_dssp TTEECHHHHHHTTCCCSEECTTTTCSBBCCEEECCE-EEESCSCSSGGGGTC--------------HHHHHHHHHHHHH-
T ss_pred cCCCChHHHhhcCCCceecCcchhhhhhcCccceEE-EEeCCCcccchhhcC--------------hHHHHHHHHHHHh-
Confidence 999999999999999999999 99999999987644 454443322100000 0000000111111
Q ss_pred cCCCCCCCCCcccccccccccHHHHHhhhhhhhccccccceEEEEEecC-----------CCCCCCCccccCCCCChhhH
Q psy4102 740 QSKNPLHYPLIEPNYFQHRRDIETLIEGIRIAFNVSASAAFKKYIRLQS-----------KNPLHYPLIEPNYFQHRRDI 808 (1049)
Q Consensus 740 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~v~l~S-----------~~p~~~P~i~~~~l~~~~D~ 808 (1049)
..++++..+... .-+++++.+ ......|+++..+...
T Consensus 348 ~~~G~l~~~~~~----------------------------~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~~---- 395 (566)
T 3fim_B 348 TRTGPLTALIAN----------------------------HLAWLRLPSNSSIFQTFPDPAAGPNSAHWETIFSNQ---- 395 (566)
T ss_dssp HSCSGGGCCSCS----------------------------EEEEECCCTTCGGGGTSCCCSSSTTSCSEEEEEESS----
T ss_pred cCCCCcccChhh----------------------------heeeeccccchhhhhhhccccccCCCCCEEEEeccc----
Confidence 111222111100 001111110 0111233332211000
Q ss_pred HHHHHHHHHHHHhhcChhhhhccCCCCCCCCCCCcccccccHHHHHhhhcccceeEeeccCC-CCCCCCCCCCCcccccc
Q psy4102 809 ETLIEGIRIAFNVSASAAFQKYNSRPLLTPMPGCAMFELFSDEYWECSLRHFTFTIYHPTST-CKMGPPTDPEAVVDPRL 887 (1049)
Q Consensus 809 ~~l~~g~~~~~~i~~~~~~~~~~~~~~~~~~pg~~~~~~~s~~~~~~~~~~~s~~~~H~~st-~~m~p~~d~~~vvD~~~ 887 (1049)
.+.. ....+.++. ... .....++|.|+|.+|+.|+ +...|.++++|+.++.|
T Consensus 396 -----------------~~~~----~~~~~~~~~-~~~-----~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D 448 (566)
T 3fim_B 396 -----------------WFHP----AIPRPDTGS-FMS-----VTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFD 448 (566)
T ss_dssp -----------------CCCT----TSCCCSSCC-EEE-----EEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHH
T ss_pred -----------------chhh----cccCCCCCC-EEE-----EEEeecCCccceEEEecCCCCCCCceeccccCCCccH
Confidence 0000 000000110 000 1125688999999999987 66778899999999999
Q ss_pred ccccccceEee----ccccCCccccCC-CCC-Cccccccccccchhc------ccccCccCCCCCCcccccCCCceeecc
Q psy4102 888 RVYGVDGLRVI----DASIMPIIVSGN-PNA-PTIMIGEKGADMTSR------YTIRPALMGPATDLEAVVDPRLRVYGV 955 (1049)
Q Consensus 888 ~v~gv~~lRvv----das~~p~~~~~~-~~~-~~~~i~e~~~d~i~~------~~~~tcrMGp~~d~~~VVD~~LRV~Gv 955 (1049)
+...++++|.+ .++.+..+.... ... +....+|.+.+++++ |.++|||||+.++.++|||++||||||
T Consensus 449 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~P~~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv 528 (566)
T 3fim_B 449 IFTMIQAVKSNLRFLSGQAWADFVIRPFDPRLRDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGV 528 (566)
T ss_dssp HHHHHHHHHHHHHHHTSGGGTTTEEEESSGGGSCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTC
T ss_pred HHHHHHHHHHHHHHHhCcccCCccccccCCCcccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccC
Confidence 88877776655 334444332111 111 223334445555553 345899999854445999999999999
Q ss_pred CCceEeeccccCCCCCCCchhHHHHHHHHHHHHhHhh
Q psy4102 956 DGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMKQSY 992 (1049)
Q Consensus 956 ~nLRVvDASImP~~~sgNt~atv~mIaEraAd~I~~~ 992 (1049)
+|||||||||||+++++|||+|+|||||||||+|+++
T Consensus 529 ~~LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 529 DGLRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp BSEEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999875
No 13
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.82 E-value=2.7e-20 Score=224.32 Aligned_cols=323 Identities=22% Similarity=0.244 Sum_probs=220.3
Q ss_pred ccHHHHhhhcccCCCCCceEEE------EEeecC---CCeeeEEEEEE-cCe------eEEEEEeeccccchHHHHHhcC
Q psy4102 599 LRDRIFNTLYKPLINAETWTIL------PLLLRP---LSTGNGIRIVF-ENL------DKVLVIRRFSCPSCHILVLSSG 662 (1049)
Q Consensus 599 ~r~~~~~~y~~p~~~r~nl~v~------~il~~~---~sratGV~~~~-~~~------~keVilsaGai~SPqILlL~SG 662 (1049)
.|++++.+|+.|+..|+|++|+ +|+|++ +.+++||+|.. ++. +|||||++|+++||||||+ ||
T Consensus 224 ~R~saa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~l-SG 302 (583)
T 3qvp_A 224 VRSDAAREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEY-SG 302 (583)
T ss_dssp BBCCHHHHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHH-TT
T ss_pred cEecHHHHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHH-cC
Confidence 4778889999999899999877 489984 46899999983 432 6899999999999999999 99
Q ss_pred CCCHHHHhhCCCCccccCCcccccccccccceeEEEEcCcccc------chhhHHHHhhccccCCCCccccccccchhhh
Q psy4102 663 IGPEEHLQGLNIPIIKNLSVGHNLQDHVGLGGLTFIVDGPVTF------KKERYQVLLCLSERTDDSTYSTYTNTLFPRY 736 (1049)
Q Consensus 663 IGP~~~L~~~GIpvv~DLPVG~NLqDH~~~~~~~~~~~~~~t~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (1049)
|||+++|+++||||++|||||+|||||+.+. +.|..+..... ......+.. .. ......+.......|
T Consensus 303 IGp~~~L~~~GI~vv~dLPVG~NLqDH~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~ 376 (583)
T 3qvp_A 303 IGMKSILEPLGIDTVVDLPVGLNLQDQTTAT-VRSRITSAGAGQGQAAWFATFNETFG---DY--SEKAHELLNTKLEQW 376 (583)
T ss_dssp BSCHHHHGGGTCCCSBCCCTTCCBBCCEEEE-EEEEECGGGCSBCEEEEEEEHHHHHG---GG--HHHHHHHHHHCHHHH
T ss_pred CCCHHHHHhCCCCceeeCccccchhhCccce-EEEEecCCccccccccccccHHHhhc---cc--hHHHHHHHHhhcchh
Confidence 9999999999999999999999999999875 44544432100 000000000 00 000000000000000
Q ss_pred hhc-cCCCCC-CCCCcccccccccccHH--------HHHh--hhhhhh-ccccccceEEEEEecCCCCCCCCcc-ccCCC
Q psy4102 737 IRL-QSKNPL-HYPLIEPNYFQHRRDIE--------TLIE--GIRIAF-NVSASAAFKKYIRLQSKNPLHYPLI-EPNYF 802 (1049)
Q Consensus 737 ~~~-~~~~p~-~~~~~~~~~~~~~~~~~--------~~~~--~~~~~~-~~~~~~~~~G~v~l~S~~p~~~P~i-~~~~l 802 (1049)
... ...+.+ ....+...|.. ..+.. .+.. .-...+ .....+.+||+|+|+|.||.+.|.| +++|+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl 455 (583)
T 3qvp_A 377 AEEAVARGGFHNTTALLIQYEN-YRDWIVNHNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYF 455 (583)
T ss_dssp HHHHHHTTSCSCHHHHHHHHHH-HHHHHHHSCCEEEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTT
T ss_pred hcccccccCccccHHHHhhhcc-chhhhccCCCCcceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCC
Confidence 000 000000 00000000000 00000 0000 000000 0113467899999999999999999 99999
Q ss_pred CChhhHHHHHHHHHHHHHhhcChhhhhccCCCCCCCCCCCcccccccHHHHHhhhcccceeEeeccCCCCCCCCCCCCCc
Q psy4102 803 QHRRDIETLIEGIRIAFNVSASAAFQKYNSRPLLTPMPGCAMFELFSDEYWECSLRHFTFTIYHPTSTCKMGPPTDPEAV 882 (1049)
Q Consensus 803 ~~~~D~~~l~~g~~~~~~i~~~~~~~~~~~~~~~~~~pg~~~~~~~s~~~~~~~~~~~s~~~~H~~st~~m~p~~d~~~v 882 (1049)
+++.|++.++++++..+++.++.+++.+.... ..|++......++++|+++++....+.+|++|
T Consensus 456 ~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~pg~~~~~~~sd~~~~~~~r~~~~t~~H~~G------------- 519 (583)
T 3qvp_A 456 LNELDLLGQAAATQLARNISNSGAMQTYFAGE---TIPGDNLAYDADLSAWTEYIPYHFRPNYHGVG------------- 519 (583)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTSTTHHHHEEEE---EESGGGSCTTCCHHHHHHHGGGSCEECSCCBC-------------
T ss_pred CCHHHHHHHHHHHHHHHHHHhCcchhhccccc---cCCCcccccCCCHHHHHHHHHhccCCCcCCCC-------------
Confidence 99999999999999999999988887654321 23454433346788899998887777777754
Q ss_pred cccccccccccceEeeccccCCccccCCCCCCccccccccccchhcccccCccCCCCCCcccccCCCceeeccCCceEee
Q psy4102 883 VDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMTSRYTIRPALMGPATDLEAVVDPRLRVYGVDGLRVID 962 (1049)
Q Consensus 883 vD~~~~v~gv~~lRvvdas~~p~~~~~~~~~~~~~i~e~~~d~i~~~~~~tcrMGp~~d~~~VVD~~LRV~Gv~nLRVvD 962 (1049)
|||||+ +++++|||++||||||+||||||
T Consensus 520 --------------------------------------------------Tc~Mg~-~~~~~VVD~~lrV~Gv~~LrVvD 548 (583)
T 3qvp_A 520 --------------------------------------------------TCSMMP-KEMGGVVDNAARVYGVQGLRVID 548 (583)
T ss_dssp --------------------------------------------------TTCBSC-GGGTCSBCTTCBBTTCBSEEECS
T ss_pred --------------------------------------------------ceeCCC-CCCCceECCCCeEecCCCeEEee
Confidence 456665 45579999999999999999999
Q ss_pred ccccCCCCCCCchhHHHHHHHHHHHHhHhhhccc
Q psy4102 963 ASIMPIIVSGNPNAPTIMIGEKGADMKQSYLDQE 996 (1049)
Q Consensus 963 ASImP~~~sgNt~atv~mIaEraAd~I~~~~~~~ 996 (1049)
|||||+++++|||+|+|||||||||+|++.++.+
T Consensus 549 aSv~P~~~~~n~~~t~~aiaeraAd~I~~~~~~~ 582 (583)
T 3qvp_A 549 GSIPPTQMSSHVMTVFYAMALKISDAILEDYASM 582 (583)
T ss_dssp TTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccCCCCCCcCcHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999999999988743
No 14
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.75 E-value=5.6e-19 Score=213.07 Aligned_cols=330 Identities=22% Similarity=0.244 Sum_probs=194.4
Q ss_pred CCCCceEEE------EEeecC-CCeeeEEEEEEc-Ce------eEEEEEeeccccchHHHHHhcCCCCHHHHhhCCCCcc
Q psy4102 612 INAETWTIL------PLLLRP-LSTGNGIRIVFE-NL------DKVLVIRRFSCPSCHILVLSSGIGPEEHLQGLNIPII 677 (1049)
Q Consensus 612 ~~r~nl~v~------~il~~~-~sratGV~~~~~-~~------~keVilsaGai~SPqILlL~SGIGP~~~L~~~GIpvv 677 (1049)
..|+|++|+ +|++++ ..+++||+|... +. +|||||++|+++||||||+ |||||+++|+++||||+
T Consensus 216 ~~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~-SGIGp~~~L~~~GI~vv 294 (577)
T 3q9t_A 216 KNKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLML-SGIGPTRELSRHGINTI 294 (577)
T ss_dssp SSCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHH-TTEECHHHHHTTTCCCS
T ss_pred hcCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHH-cCCCCHHHHHHcCCCee
Confidence 468898776 489985 468999999875 32 5899999999999999999 99999999999999999
Q ss_pred ccCC-cccccccccccceeEEEEcCccccchhhHHHHhhccccCCCCccccccccchhhhhhccCCCCCCCCCccccccc
Q psy4102 678 KNLS-VGHNLQDHVGLGGLTFIVDGPVTFKKERYQVLLCLSERTDDSTYSTYTNTLFPRYIRLQSKNPLHYPLIEPNYFQ 756 (1049)
Q Consensus 678 ~DLP-VG~NLqDH~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 756 (1049)
+||| ||+|||||+.+. +.|.++...+....... ........+..|.. ..++|+.........+.
T Consensus 295 ~dlP~VG~nl~DH~~~~-~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~y~~-~~~Gpl~~~~~~~~~~~ 359 (577)
T 3q9t_A 295 VDSRHVGQNLMDHPGVP-FVLRVKDGFGMDDVLLR-------------HGPKRDAVVSAYNK-NRSGPVGSGLLELVGFP 359 (577)
T ss_dssp EECTTTTEEEBCCEEEE-EEEEECTTSSSHHHHTS-------------CSHHHHHHHHHHHH-HSCSGGGCCSEEEEEEC
T ss_pred ccCchhhhhhhcCccee-EEEEeCCCCccchhhhc-------------chhHHHHHHHHHHh-cCCCCcccchhheeEEe
Confidence 9999 999999999875 44554433221100000 00000000111111 11222211110000000
Q ss_pred ccccHHHHHhhhhhhhccccccceEEEEEecCCCCCCCCccccCCCCChhhHHHHHHHHHHHHHhhcChhhhhccCCCCC
Q psy4102 757 HRRDIETLIEGIRIAFNVSASAAFKKYIRLQSKNPLHYPLIEPNYFQHRRDIETLIEGIRIAFNVSASAAFQKYNSRPLL 836 (1049)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~~~~~~G~v~l~S~~p~~~P~i~~~~l~~~~D~~~l~~g~~~~~~i~~~~~~~~~~~~~~~ 836 (1049)
.................. .. ......+...|.++..+.... ...+. .. ..
T Consensus 360 ~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~p~~~~~~~~~~------------------~~~~~---~~-~~ 409 (577)
T 3q9t_A 360 RIDKYLEKDAEYRKAKAA-NG-------GKDPFSPLGQPHFELDFVCMF------------------GTAFQ---WH-FP 409 (577)
T ss_dssp CCHHHHTTCHHHHHHHHH-TT-------TSCSSCTTSCCSEEEEEESSC------------------CGGGC---SS-SC
T ss_pred ecChhhhcchhhhhhhhc-cc-------cccccCCCCCceEEEEecccc------------------ccccc---cc-cc
Confidence 000000000000000000 00 000001122333332211100 00000 00 00
Q ss_pred CCCCCCcccccccHHHHHhhhccccee-EeeccCC-CCCCCCCCCCCccccccccccccceEee-----ccccCCccccC
Q psy4102 837 TPMPGCAMFELFSDEYWECSLRHFTFT-IYHPTST-CKMGPPTDPEAVVDPRLRVYGVDGLRVI-----DASIMPIIVSG 909 (1049)
Q Consensus 837 ~~~pg~~~~~~~s~~~~~~~~~~~s~~-~~H~~st-~~m~p~~d~~~vvD~~~~v~gv~~lRvv-----das~~p~~~~~ 909 (1049)
.+..+ .... ....+++|.|+| .+|+.|+ +...|.++++|+.++.|+...++++|.+ .+..+..+...
T Consensus 410 ~~~~~-~~~~-----~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~ 483 (577)
T 3q9t_A 410 TPKTG-DHLT-----VVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRFSYDLLFKGEGFKDLVES 483 (577)
T ss_dssp CCSSS-EEEE-----EEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHHHSTTGGGTEEE
T ss_pred CCCCC-CEEE-----EEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHHHHHHHHHHHhChhhhhcccc
Confidence 00001 0000 112567899999 9999987 6677889999999999988777766654 23333333211
Q ss_pred C-CCCCccccccccccchhc------ccccCccCCCCCCcccccCCCceeeccCCceEeeccccCCCCCCCchhHHHHHH
Q psy4102 910 N-PNAPTIMIGEKGADMTSR------YTIRPALMGPATDLEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIG 982 (1049)
Q Consensus 910 ~-~~~~~~~i~e~~~d~i~~------~~~~tcrMGp~~d~~~VVD~~LRV~Gv~nLRVvDASImP~~~sgNt~atv~mIa 982 (1049)
. ...+....+|.+.+++++ |.++|||||+ +++++|||++||||||+|||||||||||++|++|||+|+||||
T Consensus 484 e~~p~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~-~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~ia 562 (577)
T 3q9t_A 484 EYPWEMPLDSDKEMHRAVLDRCQTAFHPTGTARLSK-NIDQGVVDPKLKVHGIKKLRVADASVIPIIPDCRIQNSVYAVG 562 (577)
T ss_dssp EESSCCCTTCHHHHHHHHHHHCEECSCCBCTTCBCS-STTTCSBCTTCBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHH
T ss_pred ccCCCCCcCCHHHHHHHHHhccccccccccceecCC-CCCCceECCCCeEeCCCCcEEeecccccCCCCCccHHHHHHHH
Confidence 1 111223344555555554 3458999998 4568999999999999999999999999999999999999999
Q ss_pred HHHHHHhHhhhc
Q psy4102 983 EKGADMKQSYLD 994 (1049)
Q Consensus 983 EraAd~I~~~~~ 994 (1049)
|||||+|+++++
T Consensus 563 ekaAd~I~~~~~ 574 (577)
T 3q9t_A 563 EKCADMIKAEHK 574 (577)
T ss_dssp HHHHHHHHHHCT
T ss_pred HHHHHHHHhhhh
Confidence 999999998775
No 15
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=99.67 E-value=1.3e-17 Score=200.81 Aligned_cols=287 Identities=22% Similarity=0.181 Sum_probs=186.7
Q ss_pred cHHHHhhhccc-CCCCCceEEEE------EeecCCCeeeEEEEEEcCe-----eEEEEEeeccccchHHHHHhcCCCCHH
Q psy4102 600 RDRIFNTLYKP-LINAETWTILP------LLLRPLSTGNGIRIVFENL-----DKVLVIRRFSCPSCHILVLSSGIGPEE 667 (1049)
Q Consensus 600 r~~~~~~y~~p-~~~r~nl~v~~------il~~~~sratGV~~~~~~~-----~keVilsaGai~SPqILlL~SGIGP~~ 667 (1049)
|.+...+|+.+ ...|+|+++++ ++++. .+++||++..+++ +|||||+||+|+||||||+ |||||++
T Consensus 208 r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~-~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~-SGig~~~ 285 (526)
T 3t37_A 208 RVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEG-NQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMR-SGIGPHD 285 (526)
T ss_dssp ECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEET-TEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHH-TTEECHH
T ss_pred ccccccccccccccCCCCeEEEeCCEEEEEEecC-CeEEEEEEEecCceEEEeecceEEcccccCCcchhhh-ccCCchh
Confidence 45555666655 46788997763 77774 6899999998765 7899999999999999998 9999999
Q ss_pred HHhhCCCCccccCC-cccccccccccceeEEEEcCccccchhhHHHHhhccccCCCCccccccccchhhhhhccCCCCCC
Q psy4102 668 HLQGLNIPIIKNLS-VGHNLQDHVGLGGLTFIVDGPVTFKKERYQVLLCLSERTDDSTYSTYTNTLFPRYIRLQSKNPLH 746 (1049)
Q Consensus 668 ~L~~~GIpvv~DLP-VG~NLqDH~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 746 (1049)
+|+++||++++||| ||+|||||+.....++..+.+...... ..
T Consensus 286 ~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~~~~~~-----------------~~------------------- 329 (526)
T 3t37_A 286 VLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKPVPPSRL-----------------QH------------------- 329 (526)
T ss_dssp HHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSCCCCCSS-----------------CS-------------------
T ss_pred hhhccCCCeEecCCccccccccccccceeEEeccCCcchHhh-----------------cc-------------------
Confidence 99999999999999 999999999766555554432211000 00
Q ss_pred CCCcccccccccccHHHHHhhhhhhhccccccceEEEEEecC--CCCCCCCccccCCCCChhhHHHHHHHHHHHHHhhcC
Q psy4102 747 YPLIEPNYFQHRRDIETLIEGIRIAFNVSASAAFKKYIRLQS--KNPLHYPLIEPNYFQHRRDIETLIEGIRIAFNVSAS 824 (1049)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~v~l~S--~~p~~~P~i~~~~l~~~~D~~~l~~g~~~~~~i~~~ 824 (1049)
......+++ ......|.+...+...+
T Consensus 330 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 357 (526)
T 3t37_A 330 ---------------------------------SESMAYMRADSFTAAGQPEIVVGCGVAP------------------- 357 (526)
T ss_dssp ---------------------------------EEEEEEECSSCSSCCSSCCEEEEEESSC-------------------
T ss_pred ---------------------------------hhhhhhhhcccccccCCcceeeeccccc-------------------
Confidence 000000111 01111222211110000
Q ss_pred hhhhhccCCCCCCCCCCCcccccccHHHHHhhhcccceeEeeccCC-CCCCCCCCCCCccccccccccccceEee----c
Q psy4102 825 AAFQKYNSRPLLTPMPGCAMFELFSDEYWECSLRHFTFTIYHPTST-CKMGPPTDPEAVVDPRLRVYGVDGLRVI----D 899 (1049)
Q Consensus 825 ~~~~~~~~~~~~~~~pg~~~~~~~s~~~~~~~~~~~s~~~~H~~st-~~m~p~~d~~~vvD~~~~v~gv~~lRvv----d 899 (1049)
+.......+..+... . ....+.++.+++.++..++ ....|.+|++++.++.++...++++|.+ .
T Consensus 358 -----~~~~~~~~~~~~~~~-~-----~~~~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~ 426 (526)
T 3t37_A 358 -----IVSESFPAPAAGSAY-S-----LLFGITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGH 426 (526)
T ss_dssp -----CCCTTSCCCCTTSEE-E-----EEEEESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHT
T ss_pred -----ccccccccccCCcce-e-----eeccccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHc
Confidence 000000001111000 0 0124567899999998887 5667889999999998877766665544 2
Q ss_pred cccCCccccCCCCCCccccccccccchhc------ccccCccCCCCCCcccccCCCceeeccCCceEeeccccCCCCCCC
Q psy4102 900 ASIMPIIVSGNPNAPTIMIGEKGADMTSR------YTIRPALMGPATDLEAVVDPRLRVYGVDGLRVIDASIMPIIVSGN 973 (1049)
Q Consensus 900 as~~p~~~~~~~~~~~~~i~e~~~d~i~~------~~~~tcrMGp~~d~~~VVD~~LRV~Gv~nLRVvDASImP~~~sgN 973 (1049)
+..+..+............++.+.+++++ +.++|||||. |++||||++||||||+|||||||||||+++++|
T Consensus 427 ~~~~~~~~~~~~~pg~~~~~~~~~~~ir~~~~t~~H~~GTcrMG~--d~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~n 504 (526)
T 3t37_A 427 RDELAGWRERELLPGTPNSAAEMDDFIARSVITHHHPCGTCRMGK--DPDAVVDANLRLKALDNLFVVDASIMPNLTAGP 504 (526)
T ss_dssp CGGGTTTEEEECSSCCCCSHHHHHHHHHHHEEECSCCBCTTCBCS--STTCSBCTTCBBTTCSSEEECSGGGCSSCCSSC
T ss_pred ChhhhhccccccCCCCCCCHHHHHHHHHhcCccCcccCccccCCC--CCCccCCCCCEEcCCCCeEEEEcCcccCCcChH
Confidence 33333332111111111122333334433 4468999995 568999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHh
Q psy4102 974 PNAPTIMIGEKGADMK 989 (1049)
Q Consensus 974 t~atv~mIaEraAd~I 989 (1049)
||+|+|||||||||.-
T Consensus 505 p~~ti~aiAEkaAd~~ 520 (526)
T 3t37_A 505 IHAAVLAIAETFARQY 520 (526)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999964
No 16
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=99.63 E-value=6.8e-16 Score=187.47 Aligned_cols=317 Identities=19% Similarity=0.204 Sum_probs=213.2
Q ss_pred ccHHHHhhhcccCCCCCceEEEE------EeecCC---CeeeEEEEE-EcCe------eEEEEEeeccccchHHHHHhcC
Q psy4102 599 LRDRIFNTLYKPLINAETWTILP------LLLRPL---STGNGIRIV-FENL------DKVLVIRRFSCPSCHILVLSSG 662 (1049)
Q Consensus 599 ~r~~~~~~y~~p~~~r~nl~v~~------il~~~~---sratGV~~~-~~~~------~keVilsaGai~SPqILlL~SG 662 (1049)
.|.++..+|+.+...++|++|++ |+++.. .+++||++. .++. +|+||+++|+++||+|||+ ||
T Consensus 228 ~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~-SG 306 (587)
T 1gpe_A 228 VRVDAARAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEY-SG 306 (587)
T ss_dssp CBCCHHHHHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHH-TT
T ss_pred cccCHHHHHHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHh-CC
Confidence 37778889998888889997774 788742 489999998 4543 4899999999999999998 99
Q ss_pred CCCHHHHhhCCCCccccCCcccccccccccceeEEEEcCccccch-------hhHHHHhhccccCCCCccccccccchhh
Q psy4102 663 IGPEEHLQGLNIPIIKNLSVGHNLQDHVGLGGLTFIVDGPVTFKK-------ERYQVLLCLSERTDDSTYSTYTNTLFPR 735 (1049)
Q Consensus 663 IGP~~~L~~~GIpvv~DLPVG~NLqDH~~~~~~~~~~~~~~t~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1049)
|||+++|+++||||++|||||+|||||+.+.. .+.++....... ....|... .. +.+.. .......
T Consensus 307 IGp~~~L~~~gI~vv~dlPVG~nL~DH~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--G~~~~-~~~~~~~ 379 (587)
T 1gpe_A 307 IGLKSVLDQANVTQLLDLPVGINMQDQTTTTV-SSRASSAGAGQGQAVFFANFTETFGDY---AP--QARDL-LNTKLDQ 379 (587)
T ss_dssp EECHHHHHHTTCCCSEECCTTCSBBCCEEEEE-EEEECGGGCSBCEEEEEEEHHHHHGGG---HH--HHHHH-HHHSHHH
T ss_pred CCCHHHHHhCCCCeEEeCCCCcchhcCcccce-EEEeCCCcccccchHHHHHHHHHHHhC---CC--CCccc-cccceee
Confidence 99999999999999999999999999998753 444433211100 00011000 00 00000 0000001
Q ss_pred hhhccCCCCCCCCCcccccccccccHHHHHhhh----------------hhh-hccccccceEEEEEecCCCCCCCC-cc
Q psy4102 736 YIRLQSKNPLHYPLIEPNYFQHRRDIETLIEGI----------------RIA-FNVSASAAFKKYIRLQSKNPLHYP-LI 797 (1049)
Q Consensus 736 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~-~~~~~~~~~~G~v~l~S~~p~~~P-~i 797 (1049)
|.+....... ..... .+ ..++....... ... ......+.+||+|+|+|.||.+.| .|
T Consensus 380 ~~~~~~~~~~-~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i 454 (587)
T 1gpe_A 380 WAEETVARGG-FHNVT-AL---KVQYENYRNWLLDEDVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFAN 454 (587)
T ss_dssp HHHHHHHTTS-CSCHH-HH---HHHHHHHHHHHHHSCCEEEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEE
T ss_pred Eeeccccccc-ccccc-cc---cccHHHHhhhccCCCCcceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEe
Confidence 1111000000 00000 00 00000000000 000 011223567999999999999999 99
Q ss_pred ccCCCCChhhHHHHHHHHHHHHHhhcChhhhhccCCCCCCCCCCCcccccccHHHHHhhhcccceeEeeccCCCCCCCCC
Q psy4102 798 EPNYFQHRRDIETLIEGIRIAFNVSASAAFQKYNSRPLLTPMPGCAMFELFSDEYWECSLRHFTFTIYHPTSTCKMGPPT 877 (1049)
Q Consensus 798 ~~~~l~~~~D~~~l~~g~~~~~~i~~~~~~~~~~~~~~~~~~pg~~~~~~~s~~~~~~~~~~~s~~~~H~~st~~m~p~~ 877 (1049)
+++|+.++.|++.++++++..+++.++..+..+.... ..|+.......++++|+++++....+.+|+.
T Consensus 455 ~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~--------- 522 (587)
T 1gpe_A 455 DPKFFLNEFDLLGQAAASKLARDLTSQGAMKEYFAGE---TLPGYNLVQNATLSQWSDYVLQNFRPNWHAV--------- 522 (587)
T ss_dssp ECCTTSSHHHHHHHHHHHHHHHHHHTSTTHHHHEEEE---EESGGGSCTTCCHHHHHHHHHHSCEECSCCB---------
T ss_pred ecccCCChHHHHHHHHHHHHHHHHHcCcchhhhcccc---cCCCccccCCCCHHHHHHHHHHhcCcccCcc---------
Confidence 9999999999999999999999999988877653211 1222221122567777777766555555554
Q ss_pred CCCCccccccccccccceEeeccccCCccccCCCCCCccccccccccchhcccccCccCCCCCCcccccCCCceeeccCC
Q psy4102 878 DPEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMTSRYTIRPALMGPATDLEAVVDPRLRVYGVDG 957 (1049)
Q Consensus 878 d~~~vvD~~~~v~gv~~lRvvdas~~p~~~~~~~~~~~~~i~e~~~d~i~~~~~~tcrMGp~~d~~~VVD~~LRV~Gv~n 957 (1049)
+|||||+ +++++|||++||||||+|
T Consensus 523 ------------------------------------------------------GTcrMG~-~~~~sVVD~~lrV~Gv~n 547 (587)
T 1gpe_A 523 ------------------------------------------------------SSCSMMS-RELGGVVDATAKVYGTQG 547 (587)
T ss_dssp ------------------------------------------------------CTTCBSC-GGGTCSBCTTCBBTTCBS
T ss_pred ------------------------------------------------------CccccCC-CCCCceECCCCEEECCCC
Confidence 5566776 456799999999999999
Q ss_pred ceEeeccccCCCCCCCchhHHHHHHHHHHHHhHhhhcc
Q psy4102 958 LRVIDASIMPIIVSGNPNAPTIMIGEKGADMKQSYLDQ 995 (1049)
Q Consensus 958 LRVvDASImP~~~sgNt~atv~mIaEraAd~I~~~~~~ 995 (1049)
||||||||||+++++|||+|+|||||||||+|++.+++
T Consensus 548 LrVvDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~~~~ 585 (587)
T 1gpe_A 548 LRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYAK 585 (587)
T ss_dssp EEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEeeeccCCCCCCcchHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999988764
No 17
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.55 E-value=2.6e-14 Score=171.22 Aligned_cols=67 Identities=15% Similarity=0.264 Sum_probs=54.9
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcc-hHHHHH
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAIN-SPQLLM 360 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~-Tp~LLl 360 (1049)
....|...+++.|++|+++++|++|+.+ ++++|+||++..+++..+|+|+|.||||+|+|. ++.+|.
T Consensus 204 l~~~L~~~~~~~Gv~i~~~t~v~~L~~~---~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~~m~~ 271 (510)
T 4at0_A 204 LMKPLVETAEKLGVRAEYDMRVQTLVTD---DTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAYNDKMIE 271 (510)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEC---TTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHHHHHcCCEEEecCEeEEEEEC---CCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhhCHHHHH
Confidence 4445556666779999999999999987 357999999988888888999768999999998 565554
No 18
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=99.46 E-value=4.9e-14 Score=169.84 Aligned_cols=307 Identities=29% Similarity=0.412 Sum_probs=207.7
Q ss_pred ccHHHHhhhcccCCCCCceEEE------EEeecCCCeeeEEEEEEc--Ce------eEEEEEeeccccchHHHHHhcCCC
Q psy4102 599 LRDRIFNTLYKPLINAETWTIL------PLLLRPLSTGNGIRIVFE--NL------DKVLVIRRFSCPSCHILVLSSGIG 664 (1049)
Q Consensus 599 ~r~~~~~~y~~p~~~r~nl~v~------~il~~~~sratGV~~~~~--~~------~keVilsaGai~SPqILlL~SGIG 664 (1049)
.|.++..+|+.++..++|++|+ +|+++...+++||++..+ +. +|+||+++|+++||+||++ ||||
T Consensus 206 ~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~-SGiG 284 (546)
T 2jbv_A 206 TRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLML-SGIG 284 (546)
T ss_dssp BBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHH-TTEE
T ss_pred eEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhh-cCCC
Confidence 3666778899988777888766 478875368999999865 42 4599999999999999998 9999
Q ss_pred CHHHHhhCCCCccccCC-cccccccccccceeEEEEcCccccchhhHHHHhhccccCCCCccccccccchhhhhhccCCC
Q psy4102 665 PEEHLQGLNIPIIKNLS-VGHNLQDHVGLGGLTFIVDGPVTFKKERYQVLLCLSERTDDSTYSTYTNTLFPRYIRLQSKN 743 (1049)
Q Consensus 665 P~~~L~~~GIpvv~DLP-VG~NLqDH~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (1049)
|+++|+++||++++||| ||+|||||+.+.. .+.++.+.. ... ..... ...|++.. .
T Consensus 285 ~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~~-~~~~~~~~~--~~~----------~~~~~--------~~~f~~~~--~ 341 (546)
T 2jbv_A 285 PAAHLAEHGIEVLVDSPGVGEHLQDHPEGVV-QFEAKQPMV--AES----------TQWWE--------IGIFTPTE--D 341 (546)
T ss_dssp CHHHHHHTTCCCSEECTTTTCSBBCCEECCE-EEEESSCCC--SCC----------SSSCC--------EEEEECSS--T
T ss_pred chHHHHhcCCceEeeCcchhhhhhhCccceE-EEEecCCCc--ccc----------cchhh--------eEEEEecC--C
Confidence 99999999999999999 9999999998764 444443211 000 00000 00011100 0
Q ss_pred CCCCCCccccccccc-----ccHHHHHhhhhhh-hccccccceEEEEEecCCCCCCCCccccCCCCChh--hHHHHHHHH
Q psy4102 744 PLHYPLIEPNYFQHR-----RDIETLIEGIRIA-FNVSASAAFKKYIRLQSKNPLHYPLIEPNYFQHRR--DIETLIEGI 815 (1049)
Q Consensus 744 p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~G~v~l~S~~p~~~P~i~~~~l~~~~--D~~~l~~g~ 815 (1049)
....+.+.+.+.... ...........+. ......+.++|+|+|+|+||.+.|.|+++|+.++. |++.+.+++
T Consensus 342 ~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~ 421 (546)
T 2jbv_A 342 GLDRPDLMMHYGSVPFDMNTLRHGYPTTENGFSLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGI 421 (546)
T ss_dssp TCSSCSEEEEEESSCCCTTTGGGTCCCCSSEEEEEEEETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHH
T ss_pred CCCCCceEEEeccccccccccccCccCCCCeEEEEEEEcccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHH
Confidence 011111111110000 0000000000000 11123356799999999999999999999999999 999999999
Q ss_pred HHHHHhhcChhhhhccCCCCCCCCCCCcccccccHHHHHhhhcccceeEeeccCCCCCCCCCCCCCccccccccccccce
Q psy4102 816 RIAFNVSASAAFQKYNSRPLLTPMPGCAMFELFSDEYWECSLRHFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGL 895 (1049)
Q Consensus 816 ~~~~~i~~~~~~~~~~~~~~~~~~pg~~~~~~~s~~~~~~~~~~~s~~~~H~~st~~m~p~~d~~~vvD~~~~v~gv~~l 895 (1049)
+..+++.++..+..+.... ..|+. ...++++|+++++....+.+|+.
T Consensus 422 ~~~~~i~~~~~~~~~~~~~---~~p~~---~~~sd~~~~~~ir~~~~~~~H~~--------------------------- 468 (546)
T 2jbv_A 422 RKAREIAAQPAMAEWTGRE---LSPGV---EAQTDEELQDYIRKTHNTVYHPV--------------------------- 468 (546)
T ss_dssp HHHHHHHTSGGGTTTEEEE---EESCT---TCCSHHHHHHHHHHHCEECSCCB---------------------------
T ss_pred HHHHHHHcCcchhhccccc---ccCCC---CCCCHHHHHHHHHhcCCcccccc---------------------------
Confidence 9999999888776543211 12332 13566777777766555555554
Q ss_pred EeeccccCCccccCCCCCCccccccccccchhcccccCccCCCCCCcccccCCCceeeccCCceEeeccccCCCCCCCch
Q psy4102 896 RVIDASIMPIIVSGNPNAPTIMIGEKGADMTSRYTIRPALMGPATDLEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPN 975 (1049)
Q Consensus 896 Rvvdas~~p~~~~~~~~~~~~~i~e~~~d~i~~~~~~tcrMGp~~d~~~VVD~~LRV~Gv~nLRVvDASImP~~~sgNt~ 975 (1049)
+|||||+.+|+++|||++||||||+|||||||||||+++++||+
T Consensus 469 ------------------------------------GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~ 512 (546)
T 2jbv_A 469 ------------------------------------GTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPN 512 (546)
T ss_dssp ------------------------------------CTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCH
T ss_pred ------------------------------------cccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchH
Confidence 55777765577899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhHhhhccccc
Q psy4102 976 APTIMIGEKGADMKQSYLDQEEE 998 (1049)
Q Consensus 976 atv~mIaEraAd~I~~~~~~~~~ 998 (1049)
+|+||||||+||+|++.+....+
T Consensus 513 ~ti~aiAeraAd~I~~~~~~~~~ 535 (546)
T 2jbv_A 513 ITVMMIGERCADLIRSARAGETT 535 (546)
T ss_dssp HHHHHHHHHHHHHC---------
T ss_pred HHHHHHHHHHHHHHHhhcccCCC
Confidence 99999999999999988765444
No 19
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=99.38 E-value=2.3e-13 Score=163.64 Aligned_cols=301 Identities=20% Similarity=0.266 Sum_probs=194.1
Q ss_pred cHHHHhhhcccCCCCCceEEEE------EeecCC--CeeeEEEEEE-cC--------eeEEEEEeeccccchHHHHHhcC
Q psy4102 600 RDRIFNTLYKPLINAETWTILP------LLLRPL--STGNGIRIVF-EN--------LDKVLVIRRFSCPSCHILVLSSG 662 (1049)
Q Consensus 600 r~~~~~~y~~p~~~r~nl~v~~------il~~~~--sratGV~~~~-~~--------~~keVilsaGai~SPqILlL~SG 662 (1049)
|.++.. |+.. ..++|++|++ |+++.. .+++||++.. ++ .+|+||+++|+++||+|||+ ||
T Consensus 194 r~s~~~-~~~~-~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~-SG 270 (536)
T 1ju2_A 194 RHAADE-LLNK-GNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLL-SG 270 (536)
T ss_dssp BCCGGG-GGGG-SCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHH-TT
T ss_pred EecHHH-hhhh-hcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHH-cC
Confidence 444333 5544 3577887664 888763 3899999985 33 24799999999999999998 99
Q ss_pred CCCHHHHhhCCCCccccCC-cccccccccccceeEEEEcCccccchhhHHHHhhccccCCCCccccccccchhhhhhccC
Q psy4102 663 IGPEEHLQGLNIPIIKNLS-VGHNLQDHVGLGGLTFIVDGPVTFKKERYQVLLCLSERTDDSTYSTYTNTLFPRYIRLQS 741 (1049)
Q Consensus 663 IGP~~~L~~~GIpvv~DLP-VG~NLqDH~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1049)
|||+++|+++||++++||| ||+|||||+.+. +.+..+.+....... . .... ..|... .
T Consensus 271 ig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~-~~~~~~~~~~~~~~~--------------~-~~~~----~~~~~~-~ 329 (536)
T 1ju2_A 271 VGPESYLSSLNIPVVLSHPYVGQFLHDNPRNF-INILPPNPIEPTIVT--------------V-LGIS----NDFYQC-S 329 (536)
T ss_dssp EECHHHHHHTTCCCSEECTTTTEEEECCEEEE-EEECCSSCCCCCCCC--------------E-EEEC----SSEEEE-E
T ss_pred CCCHHHHHhcCCceEecCcccccchhcCccee-EEEEeCCCcccccch--------------h-hhHH----HHHHHc-C
Confidence 9999999999999999999 999999999764 333333221100000 0 0000 000000 0
Q ss_pred CCCCCCCCcccccccc-cccHHHHHhhhhhhhccccccceEEEEEe-cCCCCCCCCccccCCCCChhhHHHHHHHHHHHH
Q psy4102 742 KNPLHYPLIEPNYFQH-RRDIETLIEGIRIAFNVSASAAFKKYIRL-QSKNPLHYPLIEPNYFQHRRDIETLIEGIRIAF 819 (1049)
Q Consensus 742 ~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~v~l-~S~~p~~~P~i~~~~l~~~~D~~~l~~g~~~~~ 819 (1049)
.+++......+.++.. ...... ............+.+||+|+| +|.||.+.|.|+++|+.++.|++.++++++..+
T Consensus 330 ~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~ 407 (536)
T 1ju2_A 330 FSSLPFTTPPFGFFPSSSYPLPN--STFAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIG 407 (536)
T ss_dssp EEECCCSSCCBTTBSSSCCCCCS--SCEEEEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHHHHHH
T ss_pred CCCCCCChhhheeecCcccCCCC--cceEEEeeecCCCCcceEEEeCCCCCcccCceecccccCCccHHHHHHHHHHHHH
Confidence 0000000000000000 000000 000000011123567999999 999999999999999999999999999999999
Q ss_pred HhhcChhhhhccCCCCCCCCCCCcc------cccccHHHHHhhhcccceeEeeccCCCCCCCCCCCCCcccccccccccc
Q psy4102 820 NVSASAAFQKYNSRPLLTPMPGCAM------FELFSDEYWECSLRHFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVD 893 (1049)
Q Consensus 820 ~i~~~~~~~~~~~~~~~~~~pg~~~------~~~~s~~~~~~~~~~~s~~~~H~~st~~m~p~~d~~~vvD~~~~v~gv~ 893 (1049)
++.++..+..+..... .+.|++.. ....+++.|+++++....+.+|+
T Consensus 408 ~i~~~~~~~~~~~~~~-~~~p~~~~~~~~~p~~~~~d~~~~~~ir~~~~t~~H~-------------------------- 460 (536)
T 1ju2_A 408 ELLSTDALKPYKVEDL-PGVEGFNILGIPLPKDQTDDAAFETFCRESVASYWHY-------------------------- 460 (536)
T ss_dssp HHHTSGGGGGGCSSCC-STTCSCCBSSSCCCSCTTCHHHHHHHHHHHCEECSCC--------------------------
T ss_pred HHHcCccchhhhcccc-ccCCCccccccCCCcccCCHHHHHHHHHhccCccccC--------------------------
Confidence 9999888776543211 01122100 00124455555554433333333
Q ss_pred ceEeeccccCCccccCCCCCCccccccccccchhcccccCccCCCCCCcccccCCCceeeccCCceEeeccccCCCCCCC
Q psy4102 894 GLRVIDASIMPIIVSGNPNAPTIMIGEKGADMTSRYTIRPALMGPATDLEAVVDPRLRVYGVDGLRVIDASIMPIIVSGN 973 (1049)
Q Consensus 894 ~lRvvdas~~p~~~~~~~~~~~~~i~e~~~d~i~~~~~~tcrMGp~~d~~~VVD~~LRV~Gv~nLRVvDASImP~~~sgN 973 (1049)
++||||| +|||++||||||+|||||||||||++|++|
T Consensus 461 -------------------------------------~GTcrMG------~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~n 497 (536)
T 1ju2_A 461 -------------------------------------HGGCLVG------KVLDGDFRVTGINALRVVDGSTFPYTPASH 497 (536)
T ss_dssp -------------------------------------EESSCBT------TTBCTTSBBTTCBTEEECSGGGCSSCSSSS
T ss_pred -------------------------------------cCccCCc------cEECCCCeEcCCCCeEEeecccCCCCCCcc
Confidence 5778998 599999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHH-hHhhhccc
Q psy4102 974 PNAPTIMIGEKGADM-KQSYLDQE 996 (1049)
Q Consensus 974 t~atv~mIaEraAd~-I~~~~~~~ 996 (1049)
||+|+||||||+|+. |+++|..+
T Consensus 498 p~~t~~aiAer~A~~ii~~~~~~~ 521 (536)
T 1ju2_A 498 PQGFYLMLGRYVGIKILQERSASD 521 (536)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhc
Confidence 999999999996664 66666544
No 20
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.32 E-value=6.8e-12 Score=152.35 Aligned_cols=65 Identities=17% Similarity=0.240 Sum_probs=51.6
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEcCeEEEEcCCCcch-HHHH
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINS-PQLL 359 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~-~g~~~~v~A~k~VILAAGa~~T-p~LL 359 (1049)
....|...+++.|++|+++++|++|+.+ ++++++||.+.. +|+..+|+|++ ||||+|++.. +.++
T Consensus 257 l~~~L~~~~~~~gv~i~~~~~v~~l~~~---~~g~v~Gv~~~~~~g~~~~i~a~~-VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 257 VVQVLYDNAVKRNIDLRMNTRGIEVLKD---DKGTVKGILVKGMYKGYYWVKADA-VILATGGFAKNNERV 323 (571)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEC---TTSCEEEEEEEETTTEEEEEECSE-EEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHhcCCEEEeCCEeeEeEEc---CCCeEEEEEEEeCCCcEEEEECCe-EEEeCCCcccCHHHH
Confidence 3445556667789999999999999987 237999999876 78777899975 9999999975 4433
No 21
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.32 E-value=5e-12 Score=153.35 Aligned_cols=63 Identities=14% Similarity=0.224 Sum_probs=50.4
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEcCeEEEEcCCCcchHH
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQ 357 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~-~g~~~~v~A~k~VILAAGa~~Tp~ 357 (1049)
....|...+++.|++|+++++|++|+.+ ++++++||++.. +|+..+++| +.||||+|++...+
T Consensus 252 l~~~L~~~~~~~gv~i~~~~~v~~l~~~---~~g~v~Gv~~~~~~g~~~~i~A-~~VVlAtGg~s~~~ 315 (566)
T 1qo8_A 252 IIDTLRKAAKEQGIDTRLNSRVVKLVVN---DDHSVVGAVVHGKHTGYYMIGA-KSVVLATGGYGMNK 315 (566)
T ss_dssp HHHHHHHHHHHTTCCEECSEEEEEEEEC---TTSBEEEEEEEETTTEEEEEEE-EEEEECCCCCTTCH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEC---CCCcEEEEEEEeCCCcEEEEEc-CEEEEecCCcccCH
Confidence 3345555666789999999999999987 237999999875 777778999 57999999998543
No 22
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=99.29 E-value=7.6e-13 Score=159.89 Aligned_cols=309 Identities=17% Similarity=0.201 Sum_probs=191.5
Q ss_pred ccHHHHhhhcccCCCCCceEEE------EEeecCCCeeeEEEEEEc--C--------eeEEEEEeeccccchHHHHHhcC
Q psy4102 599 LRDRIFNTLYKPLINAETWTIL------PLLLRPLSTGNGIRIVFE--N--------LDKVLVIRRFSCPSCHILVLSSG 662 (1049)
Q Consensus 599 ~r~~~~~~y~~p~~~r~nl~v~------~il~~~~sratGV~~~~~--~--------~~keVilsaGai~SPqILlL~SG 662 (1049)
.|.++..+|+.++..++|++++ +|+++. .+++||++.+. + .+++||+++|+++||+|||+ ||
T Consensus 193 ~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~-~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~-sG 270 (546)
T 1kdg_A 193 KRAGPVATYLQTALARPNFTFKTNVMVSNVVRNG-SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQ-SG 270 (546)
T ss_dssp EECHHHHTHHHHHHTCTTEEEECSCCEEEEEEET-TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHH-TT
T ss_pred cccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHH-cC
Confidence 5777778888888777888766 477764 58999999762 3 35799999999999999998 99
Q ss_pred CCCHHHHhhC------CCCcc-----ccCCcccccccccccceeEEEEcCccccch-----------hhHHHHhhccccC
Q psy4102 663 IGPEEHLQGL------NIPII-----KNLSVGHNLQDHVGLGGLTFIVDGPVTFKK-----------ERYQVLLCLSERT 720 (1049)
Q Consensus 663 IGP~~~L~~~------GIpvv-----~DLPVG~NLqDH~~~~~~~~~~~~~~t~~~-----------~~~~~~~~~~~~~ 720 (1049)
|||+++|+++ ||+|+ +|||||+|||||+.+... +..+....... ....|.. ...
T Consensus 271 ig~~~~L~~~gn~s~~GI~v~~~~~~~dlpVG~nL~DH~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 346 (546)
T 1kdg_A 271 IGPTDMIQTVQSNPTAAAALPPQNQWINLPVGMNAQDNPSINLV-FTHPSIDAYENWADVWSNPRPADAAQYLA---NQS 346 (546)
T ss_dssp BSCHHHHHHHHTSHHHHHHSCCGGGCBCCCTTTTBBCCCCEEEE-EECTTCCCGGGGTTTTTSCCHHHHHHHHH---HSC
T ss_pred CCcHHHHHHhhccccCCcccccccccccCCcccCcccCcceeEE-EecCCcccccchhhhhcchhHHHHHHHHH---cCC
Confidence 9999999999 69985 899999999999987533 33221101000 0011110 000
Q ss_pred CCCccccccccchhhhhhccCCCCCCCCCcccccccc---cccHHHHHhhhhhhhc-ccccc-ceEEEEEecCCCCCCCC
Q psy4102 721 DDSTYSTYTNTLFPRYIRLQSKNPLHYPLIEPNYFQH---RRDIETLIEGIRIAFN-VSASA-AFKKYIRLQSKNPLHYP 795 (1049)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~-~~~G~v~l~S~~p~~~P 795 (1049)
+ .+..... .. .|+............+...+... ..+.........+.+. ....+ .++|+|+|+|.+ ..|
T Consensus 347 g--~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~ 420 (546)
T 1kdg_A 347 G--VFAGASP-KL-NFWRAYSGSDGFTRYAQGTVRPGAASVNSSLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGT 420 (546)
T ss_dssp S--GGGSCSC-CE-EEEEEEECTTSCEEEEEEEEEESCSCCCCSSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEE
T ss_pred c--ccccCCc-ce-EEEEccCCCCcchhhhhheecccccccccccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCC
Confidence 0 0000000 00 01110000000000000000000 0000000000000111 11123 679999999987 456
Q ss_pred ccccCCCCChhhHHHHHHHHHHHHHhhcChhhhhccCCCCCCCCCCCcccccccHHHHHhhhcccceeEeeccCCCCCCC
Q psy4102 796 LIEPNYFQHRRDIETLIEGIRIAFNVSASAAFQKYNSRPLLTPMPGCAMFELFSDEYWECSLRHFTFTIYHPTSTCKMGP 875 (1049)
Q Consensus 796 ~i~~~~l~~~~D~~~l~~g~~~~~~i~~~~~~~~~~~~~~~~~~pg~~~~~~~s~~~~~~~~~~~s~~~~H~~st~~m~p 875 (1049)
.++++|+.++.|++.++++++..+++..+...... ..|+. ..+++.+..+++....+.+|
T Consensus 421 ~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~----~~~~~~~~~~~~~~~~t~~H--------- 480 (546)
T 1kdg_A 421 VLTPPWLVNPVDKTVLLQALHDVVSNIGSIPGLTM-------ITPDV----TQTLEEYVDAYDPATMNSNH--------- 480 (546)
T ss_dssp EEECCTTCSHHHHHHHHHHHHHHTTTGGGSTTCEE-------EESCT----TSCHHHHHHHSCGGGGCCSC---------
T ss_pred cccccccCCchHHHHHHHHHHHHHHHhcCCCcccc-------cCCCC----CCCHHHHHHHHHHhcCcccc---------
Confidence 78899999999999999999988887765431110 01111 12333333333222222222
Q ss_pred CCCCCCccccccccccccceEeeccccCCccccCCCCCCccccccccccchhcccccCccCCCCCCcccccCCCceeecc
Q psy4102 876 PTDPEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMTSRYTIRPALMGPATDLEAVVDPRLRVYGV 955 (1049)
Q Consensus 876 ~~d~~~vvD~~~~v~gv~~lRvvdas~~p~~~~~~~~~~~~~i~e~~~d~i~~~~~~tcrMGp~~d~~~VVD~~LRV~Gv 955 (1049)
.++|||||+ +++++|||++||||||
T Consensus 481 ------------------------------------------------------~~GTcrMG~-~~~~~VVD~~lrV~Gv 505 (546)
T 1kdg_A 481 ------------------------------------------------------WVSSTTIGS-SPQSAVVDSNVKVFGT 505 (546)
T ss_dssp ------------------------------------------------------CBCTTCBCS-CTTTCSBCTTCBBTTC
T ss_pred ------------------------------------------------------cccceecCC-CCCCeeECCCCeEccC
Confidence 357788887 4678999999999999
Q ss_pred CCceEeeccccCCCCCCCchhHHHHHHHHHHHHhHhhhc
Q psy4102 956 DGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMKQSYLD 994 (1049)
Q Consensus 956 ~nLRVvDASImP~~~sgNt~atv~mIaEraAd~I~~~~~ 994 (1049)
+|||||||||||+++++|||+|+|||||||||+|++.+.
T Consensus 506 ~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 544 (546)
T 1kdg_A 506 NNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAG 544 (546)
T ss_dssp SSEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTT
T ss_pred CCcEEeEecccCCCCCccHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999998764
No 23
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.23 E-value=5.2e-11 Score=144.85 Aligned_cols=57 Identities=30% Similarity=0.334 Sum_probs=47.3
Q ss_pred chHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcch
Q psy4102 294 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINS 355 (1049)
Q Consensus 294 ~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~T 355 (1049)
.|...+.+.|++|++++.|++|+.+ +++++||.+.. +|+...++|+ .||||+|++..
T Consensus 160 ~L~~~~~~~gv~i~~~~~v~~Li~~----~g~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 218 (621)
T 2h88_A 160 TLYGRSLRYDTSYFVEYFALDLLME----NGECRGVIALCIEDGTIHRFRAK-NTVIATGGYGR 218 (621)
T ss_dssp HHHHHHTTSCCEEEETEEEEEEEEE----TTEEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHHHHHhCCCEEEEceEEEEEEEE----CCEEEEEEEEEcCCCcEEEEEcC-eEEECCCcccc
Confidence 3445556789999999999999987 57999999874 6777789995 79999999875
No 24
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.18 E-value=1.4e-10 Score=141.95 Aligned_cols=57 Identities=18% Similarity=0.174 Sum_probs=46.5
Q ss_pred chHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcch
Q psy4102 294 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINS 355 (1049)
Q Consensus 294 ~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~T 355 (1049)
.|...+.+.|++|++++.|++|+.+ +++++||.+.+ +|+...++|+ .||||+|++..
T Consensus 163 ~L~~~a~~~gv~i~~~~~v~~L~~~----~g~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 221 (660)
T 2bs2_A 163 AVANECLKLGVSIQDRKEAIALIHQ----DGKCYGAVVRDLVTGDIIAYVAK-GTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHHTCEEECSEEEEEEEEE----TTEEEEEEEEETTTCCEEEEECS-EEEECCCCCGG
T ss_pred HHHHHHHhCCCEEEECcEEEEEEec----CCEEEEEEEEECCCCcEEEEEcC-EEEEccCcchh
Confidence 3444555679999999999999987 47999998864 6777789996 69999999874
No 25
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.17 E-value=2.3e-10 Score=138.91 Aligned_cols=58 Identities=22% Similarity=0.229 Sum_probs=46.6
Q ss_pred chHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcch
Q psy4102 294 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINS 355 (1049)
Q Consensus 294 ~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~T 355 (1049)
.|...+.+.|++|++++.|++|+.+ ++++++||.+.+ +|+..+++|+ .||||+|++..
T Consensus 148 ~L~~~~~~~gv~i~~~~~v~~L~~~---~~g~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGg~~~ 207 (588)
T 2wdq_A 148 TLYQQNLKNHTTIFSEWYALDLVKN---QDGAVVGCTALCIETGEVVYFKAR-ATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHTTCEEEETEEEEEEEEC---TTSCEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHHHHHhCCCEEEeCcEEEEEEEC---CCCEEEEEEEEEcCCCeEEEEEcC-EEEECCCCCcc
Confidence 3445556679999999999999985 247899999864 5777789995 79999999875
No 26
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.16 E-value=2.4e-10 Score=138.63 Aligned_cols=66 Identities=17% Similarity=0.274 Sum_probs=51.5
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEcCeEEEEcCCCcch-HHHHH
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINS-PQLLM 360 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~-~g~~~~v~A~k~VILAAGa~~T-p~LLl 360 (1049)
....|...+++.|++|+++++|++|+.+ ++++++||++.. +|+..+|+|+ .||||+|++.. ++++.
T Consensus 257 l~~~L~~~~~~~gv~i~~~t~v~~l~~~---~~g~v~GV~~~~~~G~~~~i~A~-~VVlAtGg~~~~~~~~~ 324 (572)
T 1d4d_A 257 VAQVLWDNAVKRGTDIRLNSRVVRILED---ASGKVTGVLVKGEYTGYYVIKAD-AVVIAAGGFAKNNERVS 324 (572)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEC-----CCEEEEEEEETTTEEEEEECS-EEEECCCCCTTCHHHHH
T ss_pred HHHHHHHHHHHcCCeEEecCEEEEEEEC---CCCeEEEEEEEeCCCcEEEEEcC-EEEEeCCCCccCHHHHH
Confidence 3445556666789999999999999987 227999999875 7777789995 79999999974 55554
No 27
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.13 E-value=3.1e-10 Score=136.45 Aligned_cols=58 Identities=19% Similarity=0.264 Sum_probs=45.8
Q ss_pred chHHhhhc-CCcEEecCceEEEEEeccCCCCC------eEEEEEEEe--CCeEEEEEcCeEEEEcCCCcch
Q psy4102 294 FLRPIRLR-KNLHIAMETQALRLLFDKSGPVP------KAVGIEILR--DGRKHIIRAKKEIISSAGAINS 355 (1049)
Q Consensus 294 ~L~~~~~~-~nl~I~~~t~V~~Il~d~~~~~~------rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~T 355 (1049)
.|...+++ .|++|++++.|++|+.+. ++ +++||.+.+ +|+..+++|+ .||||+|++..
T Consensus 143 ~L~~~~~~~~gv~i~~~~~v~~L~~~~---~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~~ 209 (540)
T 1chu_A 143 TLVSKALNHPNIRVLERTNAVDLIVSD---KIGLPGTRRVVGAWVWNRNKETVETCHAK-AVVLATGGASK 209 (540)
T ss_dssp CCHHHHHHCTTEEEECSEEEEEEEEGG---GTTCCSSCBEEEEEEEETTTTEEEEEECS-EEEECCCCCGG
T ss_pred HHHHHHHcCCCCEEEeCcEEEEEEEcC---CCCcccCCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCccc
Confidence 34444444 799999999999999841 24 899999875 6777789996 69999999864
No 28
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.09 E-value=3.5e-10 Score=129.87 Aligned_cols=61 Identities=15% Similarity=0.220 Sum_probs=46.6
Q ss_pred chHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 294 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 294 ~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
.|...+++.|++|+++++|++|..+ +++++||+. .+| +++|+ .||+|+|+. ++.|+...|+
T Consensus 154 ~l~~~~~~~Gv~i~~~~~v~~i~~~----~~~v~gv~~-~~g---~i~a~-~VV~A~G~~-s~~l~~~~g~ 214 (382)
T 1y56_B 154 AFAVKAKEYGAKLLEYTEVKGFLIE----NNEIKGVKT-NKG---IIKTG-IVVNATNAW-ANLINAMAGI 214 (382)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEES----SSBEEEEEE-TTE---EEECS-EEEECCGGG-HHHHHHHHTC
T ss_pred HHHHHHHHCCCEEECCceEEEEEEE----CCEEEEEEE-CCc---EEECC-EEEECcchh-HHHHHHHcCC
Confidence 3545566789999999999999887 467888875 233 58997 599999975 6677766664
No 29
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.07 E-value=4.6e-11 Score=136.08 Aligned_cols=66 Identities=12% Similarity=0.129 Sum_probs=48.2
Q ss_pred HchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhC-CCC
Q psy4102 293 AFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVS-GIG 365 (1049)
Q Consensus 293 ~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~S-GIG 365 (1049)
..|...+++.|++|+++++|++|..++ +.++.|.. .+|+..+++|+ .||+|+|++ |++|+... |+.
T Consensus 154 ~~l~~~~~~~Gv~i~~~~~v~~i~~~~----~~~~~v~~-~~g~~~~~~a~-~VV~A~G~~-s~~l~~~~~g~~ 220 (369)
T 3dme_A 154 LAYQGDAESDGAQLVFHTPLIAGRVRP----EGGFELDF-GGAEPMTLSCR-VLINAAGLH-APGLARRIEGIP 220 (369)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEECT----TSSEEEEE-CTTSCEEEEEE-EEEECCGGG-HHHHHHTEETSC
T ss_pred HHHHHHHHHCCCEEECCCEEEEEEEcC----CceEEEEE-CCCceeEEEeC-EEEECCCcc-hHHHHHHhcCCC
Confidence 344456677899999999999999872 23234544 45655578996 599999985 88888877 763
No 30
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.07 E-value=3.3e-10 Score=138.62 Aligned_cols=59 Identities=17% Similarity=0.246 Sum_probs=44.9
Q ss_pred hHHhhhcC--CcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcch
Q psy4102 295 LRPIRLRK--NLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINS 355 (1049)
Q Consensus 295 L~~~~~~~--nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~T 355 (1049)
|...+++. |++|+.++.|++|+.++. ..++++||.+.. +|+...|+|+ .||||+|+++.
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~-~~g~v~Gv~~~~~~~g~~~~i~Ak-~VVLATGG~g~ 234 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKN-TPNRIAGAVGFNLRANEVHIFKAN-AMVVACGGAVN 234 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSS-STTBEEEEEEEESSSSCEEEEECS-EEEECCCCBCS
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCC-ccceEEEEEEEEcCCCcEEEEEeC-EEEECCCcccc
Confidence 43444443 999999999999999721 014999998764 6777789996 79999999873
No 31
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.04 E-value=3.4e-10 Score=131.00 Aligned_cols=62 Identities=16% Similarity=0.185 Sum_probs=46.6
Q ss_pred HchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 293 AFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 293 ~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
..|...+++.|++|+++++|++|..+ ++++++|+. .+| +++|+ .||+|+|+. ++.++...|+
T Consensus 178 ~~l~~~~~~~g~~i~~~~~v~~i~~~----~~~~~~v~~-~~g---~~~a~-~vV~a~G~~-s~~l~~~~g~ 239 (405)
T 2gag_B 178 WAFARKANEMGVDIIQNCEVTGFIKD----GEKVTGVKT-TRG---TIHAG-KVALAGAGH-SSVLAEMAGF 239 (405)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEES----SSBEEEEEE-TTC---CEEEE-EEEECCGGG-HHHHHHHHTC
T ss_pred HHHHHHHHHCCCEEEcCCeEEEEEEe----CCEEEEEEe-CCc---eEECC-EEEECCchh-HHHHHHHcCC
Confidence 34545566789999999999999887 467778865 344 58886 599999975 6677766665
No 32
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.00 E-value=2.8e-09 Score=129.67 Aligned_cols=58 Identities=21% Similarity=0.240 Sum_probs=45.5
Q ss_pred chHHhhhcCC-cEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchH
Q psy4102 294 FLRPIRLRKN-LHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSP 356 (1049)
Q Consensus 294 ~L~~~~~~~n-l~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp 356 (1049)
.|...+.+.+ ++|++++.|++|+.+ +++++||.+.. +|+...++|+ .||+|+|++...
T Consensus 139 ~L~~~~~~~gnv~i~~~~~v~~l~~~----~g~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~s~~ 199 (602)
T 1kf6_A 139 TLFQTSLQFPQIQRFDEHFVLDILVD----DGHVRGLVAMNMMEGTLVQIRAN-AVVMATGGAGRV 199 (602)
T ss_dssp HHHHHHTTCTTEEEEETEEEEEEEEE----TTEEEEEEEEETTTTEEEEEECS-CEEECCCCCGGG
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEEEe----CCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCCccc
Confidence 3434444445 999999999999987 47999998764 6777789997 599999998754
No 33
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.00 E-value=1.3e-09 Score=133.93 Aligned_cols=59 Identities=15% Similarity=0.147 Sum_probs=45.5
Q ss_pred HchHHhhhcC-Cc-EEecCceEEEEEeccCCCC--CeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcch
Q psy4102 293 AFLRPIRLRK-NL-HIAMETQALRLLFDKSGPV--PKAVGIEILR--DGRKHIIRAKKEIISSAGAINS 355 (1049)
Q Consensus 293 ~~L~~~~~~~-nl-~I~~~t~V~~Il~d~~~~~--~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~T 355 (1049)
..|...+++. |+ +|++++.|++|+.++ + ++++||.+.. +|+...++|+ .||||+|++..
T Consensus 155 ~~l~~~~~~~~gv~~i~~~~~v~~L~~~~---~~~g~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGG~~~ 219 (643)
T 1jnr_A 155 PIIAEAAKMAVGEENIYERVFIFELLKDN---NDPNAVAGAVGFSVREPKFYVFKAK-AVILATGGATL 219 (643)
T ss_dssp HHHHHHHHHHHCGGGEECSEEEEEEEECT---TCTTBEEEEEEEESSSSCEEEEECS-EEEECCCCBCS
T ss_pred HHHHHHHHhcCCCcEEEecCEEEEEEEcC---CccceeEEEEEEEecCCcEEEEEcC-EEEECCCcccc
Confidence 3444444554 99 999999999999872 2 3999998753 6666789995 79999999875
No 34
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.99 E-value=2.3e-10 Score=139.66 Aligned_cols=298 Identities=16% Similarity=0.181 Sum_probs=184.4
Q ss_pred HHhhhcccC------CCCCceEEE------EEeecCC-CeeeEEEEEE--cCe-----eEEEEEeeccccchHHHHHhcC
Q psy4102 603 IFNTLYKPL------INAETWTIL------PLLLRPL-STGNGIRIVF--ENL-----DKVLVIRRFSCPSCHILVLSSG 662 (1049)
Q Consensus 603 ~~~~y~~p~------~~r~nl~v~------~il~~~~-sratGV~~~~--~~~-----~keVilsaGai~SPqILlL~SG 662 (1049)
+..+|+.+. ..++|++|+ +|+++.. .+++||++.+ ++. .++||+++|++.+|++|++ ||
T Consensus 255 ~~~~~l~~~~~l~~~~~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~-sg 333 (623)
T 3pl8_A 255 SANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVN-SG 333 (623)
T ss_dssp CHHHHCCCCCEEETTEEEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHT-TT
T ss_pred hHHhhhhhhhcchhhccCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHh-cC
Confidence 345566665 455677655 4777643 4899999986 232 5689999999999999998 99
Q ss_pred CCCHHHHhhCCCCccccCC-cccccccccccceeEEEEcCccccchhhHHHHhhcc--ccCCCCcc------ccccccc-
Q psy4102 663 IGPEEHLQGLNIPIIKNLS-VGHNLQDHVGLGGLTFIVDGPVTFKKERYQVLLCLS--ERTDDSTY------STYTNTL- 732 (1049)
Q Consensus 663 IGP~~~L~~~GIpvv~DLP-VG~NLqDH~~~~~~~~~~~~~~t~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~- 732 (1049)
|||+.+|+.+||++ ||| ||+|||||+.+...++..++ . .+. ....+. .+.+...+ ....+..
T Consensus 334 iG~~~~l~~~~i~~--~l~~vG~nl~dh~~~~~~~~~~~~-~-~~~----~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~ 405 (623)
T 3pl8_A 334 FGQLGRPNPANPPE--LLPSLGSYITEQSLVFCQTVMSTE-L-IDS----VKSDMTIRGTPGELTYSVTYTPGASTNKHP 405 (623)
T ss_dssp SSCCSSCCTTSCCS--SCTTTTBSCBCCCEEEEEEEECHH-H-HHH----HTTTCEEESCTTSTTCEEECCTTCTTCSSC
T ss_pred CCccccccccCCCC--CCcccccchhhCcCceEEEEECCc-c-ccc----ccccccccccCCCcceecccccCcccccCC
Confidence 99999999999999 999 99999999987655554322 0 000 000000 00000000 0000000
Q ss_pred --hh-----hhhhccCCCCCCCCCcc------ccccc--------cc---------ccHHHHHhhhhhhhccccccceEE
Q psy4102 733 --FP-----RYIRLQSKNPLHYPLIE------PNYFQ--------HR---------RDIETLIEGIRIAFNVSASAAFKK 782 (1049)
Q Consensus 733 --~~-----~~~~~~~~~p~~~~~~~------~~~~~--------~~---------~~~~~~~~~~~~~~~~~~~~~~~G 782 (1049)
|. .|.+ .+.+++..|.-. ..|.. ++ ..++.-+ .+.+.......+..++
T Consensus 406 p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~p~~~n 483 (623)
T 3pl8_A 406 DWWNEKVKNHMMQ-HQEDPLPIPFEDPEPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRL-IVDWRFFGRTEPKEEN 483 (623)
T ss_dssp HHHHHHHHHHHHH-CTTCCCSSCTTCCCCEEECCCBTTBCEEEEEECCSCCCSCCCCSSCGGG-EEEEEEEECCCCCTTC
T ss_pred chhhhhhhhhhhc-ccccccccccccccccccccccccCcchhhhhhhhccccccccccccce-EEEEEEEEeeccCCCC
Confidence 00 1111 112222221000 00000 00 0000000 0000011112234567
Q ss_pred EEEecC--CCCCCCCccccCCCCChh-hHHHHHHHHHHHHHhhcChhhhhccCCCCCCCCCCCcccccccHHHHHhhhcc
Q psy4102 783 YIRLQS--KNPLHYPLIEPNYFQHRR-DIETLIEGIRIAFNVSASAAFQKYNSRPLLTPMPGCAMFELFSDEYWECSLRH 859 (1049)
Q Consensus 783 ~v~l~S--~~p~~~P~i~~~~l~~~~-D~~~l~~g~~~~~~i~~~~~~~~~~~~~~~~~~pg~~~~~~~s~~~~~~~~~~ 859 (1049)
+|+|.+ .|+...|.+..+|..++. |+..+.++++...++......... .
T Consensus 484 ~v~L~~~~~D~~g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~----------~------------------ 535 (623)
T 3pl8_A 484 KLWFSDKITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLP----------G------------------ 535 (623)
T ss_dssp EEEEEEEEECTTSSEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECT----------T------------------
T ss_pred EEEECCCCcCCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCccc----------C------------------
Confidence 899987 799999999999999999 998888888877777653211000 0
Q ss_pred cceeEeeccCCCCCCCCCCCCCccccccccccccceEeeccccCCccccCCCCCCccccccccccchhcccccCccCCCC
Q psy4102 860 FTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMTSRYTIRPALMGPA 939 (1049)
Q Consensus 860 ~s~~~~H~~st~~m~p~~d~~~vvD~~~~v~gv~~lRvvdas~~p~~~~~~~~~~~~~i~e~~~d~i~~~~~~tcrMGp~ 939 (1049)
+ + +.. .+ + -...|.++||+||+.
T Consensus 536 ---------------~--~------~~~---------------~~---------~----------~~~~H~~gt~~mg~~ 558 (623)
T 3pl8_A 536 ---------------S--L------PQF---------------ME---------P----------GLVLHLGGTHRMGFD 558 (623)
T ss_dssp ---------------S--C------SEE---------------CC---------T----------TTTCCCBCTTCBCSS
T ss_pred ---------------c--h------hhc---------------cC---------C----------CCcccCCCceeCCCC
Confidence 0 0 000 00 0 001234789999985
Q ss_pred CCccccc-CCCceeeccCCceEeeccccCCCCCCCchhHHHHHHHHHHHHhHhhhccc
Q psy4102 940 TDLEAVV-DPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMKQSYLDQE 996 (1049)
Q Consensus 940 ~d~~~VV-D~~LRV~Gv~nLRVvDASImP~~~sgNt~atv~mIaEraAd~I~~~~~~~ 996 (1049)
++.++|| |+++||||++||||+|+||||+.+++||++|+||+|||+||.|++.+++.
T Consensus 559 ~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~~~ 616 (623)
T 3pl8_A 559 EKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTPS 616 (623)
T ss_dssp TTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhhcC
Confidence 4778997 99999999999999999999999999999999999999999999998754
No 35
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.98 E-value=1e-09 Score=125.59 Aligned_cols=60 Identities=17% Similarity=0.103 Sum_probs=44.2
Q ss_pred chHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 294 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 294 ~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
.|...+++.|++|+++++|++|..+ +++ ++|+. ++. +++|+ .||+|+|++ |++|+...|+
T Consensus 159 ~l~~~a~~~Gv~i~~~~~V~~i~~~----~~~-~~V~t--~~g--~i~a~-~VV~A~G~~-s~~l~~~~g~ 218 (381)
T 3nyc_A 159 GYLRGIRRNQGQVLCNHEALEIRRV----DGA-WEVRC--DAG--SYRAA-VLVNAAGAW-CDAIAGLAGV 218 (381)
T ss_dssp HHHHHHHHTTCEEESSCCCCEEEEE----TTE-EEEEC--SSE--EEEES-EEEECCGGG-HHHHHHHHTC
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEEe----CCe-EEEEe--CCC--EEEcC-EEEECCChh-HHHHHHHhCC
Confidence 3445566789999999999999987 334 45543 333 68997 499999974 7788877665
No 36
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.98 E-value=8.9e-10 Score=129.09 Aligned_cols=58 Identities=26% Similarity=0.334 Sum_probs=44.8
Q ss_pred HchHHhhhcCCcEEecCc---eEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHH
Q psy4102 293 AFLRPIRLRKNLHIAMET---QALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLL 359 (1049)
Q Consensus 293 ~~L~~~~~~~nl~I~~~t---~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LL 359 (1049)
..|...+++.|++|++++ +|++|+.+ +++++||++ .+|+ +++|+ .||+|+|++ |++|+
T Consensus 165 ~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~----~~~v~gV~t-~~G~--~i~Ad-~VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 165 VAAAREAQRMGVKFVTGTPQGRVVTLIFE----NNDVKGAVT-ADGK--IWRAE-RTFLCAGAS-AGQFL 225 (438)
T ss_dssp HHHHHHHHHTTCEEEESTTTTCEEEEEEE----TTEEEEEEE-TTTE--EEECS-EEEECCGGG-GGGTS
T ss_pred HHHHHHHHhcCCEEEeCCcCceEEEEEec----CCeEEEEEE-CCCC--EEECC-EEEECCCCC-hhhhc
Confidence 345556677899999999 99999987 468999976 3554 58897 599999986 55554
No 37
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.95 E-value=3e-09 Score=128.83 Aligned_cols=63 Identities=14% Similarity=0.174 Sum_probs=50.7
Q ss_pred HHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 296 RPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 296 ~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
...+.+.|++|+++++|++|..+ +++++||++.+ +|+..+|+|+ .||+|+|++ +.+++...|+
T Consensus 195 ~~~a~~~Ga~i~~~t~V~~l~~~----~~~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~w-s~~l~~~~g~ 259 (571)
T 2rgh_A 195 IKKAAEDGAYLVSKMKAVGFLYE----GDQIVGVKARDLLTDEVIEIKAK-LVINTSGPW-VDKVRNLNFT 259 (571)
T ss_dssp HHHHHHTTCEEESSEEEEEEEEE----TTEEEEEEEEETTTCCEEEEEBS-CEEECCGGG-HHHHHTTCCS
T ss_pred HHHHHHcCCeEEeccEEEEEEEe----CCEEEEEEEEEcCCCCEEEEEcC-EEEECCChh-HHHHHHhhcc
Confidence 34556789999999999999987 46899998875 5666679997 599999986 8888876654
No 38
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.93 E-value=4.5e-09 Score=123.52 Aligned_cols=58 Identities=10% Similarity=0.192 Sum_probs=44.8
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchH
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSP 356 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp 356 (1049)
....|...+++.|++|+++++|++|..+ ++++.+|++. +|+ +++|+ .||+|+|++..|
T Consensus 136 l~~~L~~~~~~~GV~i~~~~~V~~i~~~----~~~v~~V~~~-~G~--~i~Ad-~VVlAtGg~s~~ 193 (447)
T 2i0z_A 136 VVDALLTRLKDLGVKIRTNTPVETIEYE----NGQTKAVILQ-TGE--VLETN-HVVIAVGGKSVP 193 (447)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEE----TTEEEEEEET-TCC--EEECS-CEEECCCCSSSG
T ss_pred HHHHHHHHHHHCCCEEEeCcEEEEEEec----CCcEEEEEEC-CCC--EEECC-EEEECCCCCcCC
Confidence 3344555566789999999999999887 4678888763 454 58897 599999998865
No 39
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.92 E-value=7.9e-09 Score=124.80 Aligned_cols=66 Identities=17% Similarity=0.161 Sum_probs=53.6
Q ss_pred chHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHHHhCCCC
Q psy4102 294 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGIG 365 (1049)
Q Consensus 294 ~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGIG 365 (1049)
.|...+.+.|++|+++++|++|..+ +++++||++.+ +|+..+++|+ .||+|+|++ +.+|+...|+.
T Consensus 175 ~L~~~a~~~G~~i~~~~~V~~l~~~----~g~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~~-s~~l~~~~g~~ 242 (561)
T 3da1_A 175 EIMKEAVARGAVALNYMKVESFIYD----QGKVVGVVAKDRLTDTTHTIYAK-KVVNAAGPW-VDTLREKDRSK 242 (561)
T ss_dssp HHHHHHHHTTCEEEESEEEEEEEEE----TTEEEEEEEEETTTCCEEEEEEE-EEEECCGGG-HHHHHHTTTCC
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEEc----CCeEEEEEEEEcCCCceEEEECC-EEEECCCcc-hHHHHHhcCCC
Confidence 3445566789999999999999987 57899999876 5667789996 699999975 88888887763
No 40
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.89 E-value=7e-09 Score=119.76 Aligned_cols=36 Identities=28% Similarity=0.558 Sum_probs=33.5
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.++||||||||++|+++|+.|++. |.+|+||||++.
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~-G~~V~vlE~~~~ 38 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAER-GHRVLVLERHTF 38 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCC
Confidence 458999999999999999999998 999999999863
No 41
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.86 E-value=4.3e-09 Score=133.38 Aligned_cols=62 Identities=18% Similarity=0.218 Sum_probs=47.8
Q ss_pred HchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 293 AFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 293 ~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
..|...+++.|++|+++++|++|..+ ++++++|.. .+| +++|+ .||+|+|++ ++.++...|+
T Consensus 155 ~~L~~~a~~~Gv~i~~~t~V~~i~~~----~~~v~~V~t-~~G---~i~Ad-~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 155 QLLIKRTESAGVTYRGSTTVTGIEQS----GGRVTGVQT-ADG---VIPAD-IVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEE----TTEEEEEEE-TTE---EEECS-EEEECCGGG-HHHHHHTTTC
T ss_pred HHHHHHHHHcCCEEECCceEEEEEEe----CCEEEEEEE-CCc---EEECC-EEEECCccc-hHHHHHHhCC
Confidence 34545666789999999999999887 467878865 233 58997 599999985 6888877775
No 42
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.83 E-value=8.4e-09 Score=119.81 Aligned_cols=37 Identities=27% Similarity=0.493 Sum_probs=32.6
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
..+|||||||||++|+++|..|++. |.+|+|||+++.
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~-G~~V~llEk~~~ 61 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKR-GRRVLVIDHARA 61 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCC
Confidence 4579999999999999999999998 999999999874
No 43
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.82 E-value=1.9e-08 Score=120.25 Aligned_cols=64 Identities=16% Similarity=0.291 Sum_probs=46.5
Q ss_pred HchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHH--HHHhCCC
Q psy4102 293 AFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQ--LLMVSGI 364 (1049)
Q Consensus 293 ~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~--LLl~SGI 364 (1049)
..|...+++.|++|+++++|++|..+ ++++++|.+. +|+ ++.|+ .||+|+|+..... +|...|+
T Consensus 224 ~~L~~~l~~~Gv~I~~~t~V~~I~~~----~~~v~gV~l~-~G~--~i~Ad-~VVlA~G~~s~~~~~~l~~~Gi 289 (549)
T 3nlc_A 224 EKMRATIIELGGEIRFSTRVDDLHME----DGQITGVTLS-NGE--EIKSR-HVVLAVGHSARDTFEMLHERGV 289 (549)
T ss_dssp HHHHHHHHHTTCEEESSCCEEEEEES----SSBEEEEEET-TSC--EEECS-CEEECCCTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEEe----CCEEEEEEEC-CCC--EEECC-EEEECCCCChhhHHHHHHHcCC
Confidence 34545556679999999999999887 4678888873 454 58897 4999999866433 4444444
No 44
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.81 E-value=2.5e-09 Score=125.68 Aligned_cols=66 Identities=15% Similarity=0.199 Sum_probs=46.4
Q ss_pred HchHHhhhcCCcEEecCceEEEEEecc----------CC-CCCeEEEEEEEeCCeEEEE--EcCeEEEEcCCCcchHHHH
Q psy4102 293 AFLRPIRLRKNLHIAMETQALRLLFDK----------SG-PVPKAVGIEILRDGRKHII--RAKKEIISSAGAINSPQLL 359 (1049)
Q Consensus 293 ~~L~~~~~~~nl~I~~~t~V~~Il~d~----------~~-~~~rv~GV~~~~~g~~~~v--~A~k~VILAAGa~~Tp~LL 359 (1049)
..|...+++.|++|+++++|++|..+. .+ +++++.+|+. .+| ++ +|+ .||+|+|++ +++|+
T Consensus 185 ~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t-~~g---~i~~~Ad-~VV~AtG~~-s~~l~ 258 (448)
T 3axb_A 185 DYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVL-SDG---TRVEVGE-KLVVAAGVW-SNRLL 258 (448)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEE-TTS---CEEEEEE-EEEECCGGG-HHHHH
T ss_pred HHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEe-CCC---EEeecCC-EEEECCCcC-HHHHH
Confidence 345455677899999999999998710 00 1356777765 344 47 886 599999986 77887
Q ss_pred HhCCC
Q psy4102 360 MVSGI 364 (1049)
Q Consensus 360 l~SGI 364 (1049)
...|+
T Consensus 259 ~~~g~ 263 (448)
T 3axb_A 259 NPLGI 263 (448)
T ss_dssp GGGTC
T ss_pred HHcCC
Confidence 76654
No 45
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.80 E-value=5.3e-09 Score=119.89 Aligned_cols=36 Identities=33% Similarity=0.573 Sum_probs=33.7
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+.+|||||||||++|+++|++|++. |.+|+|||++.
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~-G~~V~llE~~~ 50 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGT 50 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 4579999999999999999999998 99999999985
No 46
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.80 E-value=1.3e-08 Score=116.76 Aligned_cols=35 Identities=37% Similarity=0.581 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
+|||||||||.+|+++|++|++. |.+|+|||++..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCC
Confidence 58999999999999999999998 999999999863
No 47
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.76 E-value=2.8e-08 Score=117.45 Aligned_cols=53 Identities=13% Similarity=0.243 Sum_probs=40.1
Q ss_pred chHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcc
Q psy4102 294 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAIN 354 (1049)
Q Consensus 294 ~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~ 354 (1049)
.|...+++.|++|+.++.| +|+.+ +++++||.+..++. ++.|+ .||+|+|++.
T Consensus 124 ~L~~~~~~~gv~i~~~~~v-~l~~~----~~~v~Gv~v~~~~g--~~~a~-~VVlAtGg~~ 176 (472)
T 2e5v_A 124 FLLKLAREEGIPIIEDRLV-EIRVK----DGKVTGFVTEKRGL--VEDVD-KLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHTTCCEECCCEE-EEEEE----TTEEEEEEETTTEE--ECCCS-EEEECCCCCG
T ss_pred HHHHHHHhCCCEEEECcEE-EEEEe----CCEEEEEEEEeCCC--eEEee-eEEECCCCCc
Confidence 3444456789999999999 99887 47899998753222 36685 6999999875
No 48
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.74 E-value=4.5e-08 Score=116.76 Aligned_cols=59 Identities=17% Similarity=0.143 Sum_probs=46.5
Q ss_pred hHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHHH
Q psy4102 295 LRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLM 360 (1049)
Q Consensus 295 L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LLl 360 (1049)
|...+.+.|++|+++++|++|..+ + ++.+|.+.+ +|+..+++|+ .||+|+|++ +.+++.
T Consensus 155 l~~~a~~~Gv~i~~~~~V~~l~~~----~-~~~~V~~~d~~~G~~~~i~A~-~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 155 NAQMVVRKGGEVLTRTRATSARRE----N-GLWIVEAEDIDTGKKYSWQAR-GLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEE----T-TEEEEEEEETTTCCEEEEEES-CEEECCGGG-HHHHHH
T ss_pred HHHHHHHcCCEEEcCcEEEEEEEe----C-CEEEEEEEECCCCCEEEEECC-EEEECCChh-HHHHHH
Confidence 444556779999999999999887 2 578888764 5766789997 599999986 777765
No 49
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.73 E-value=2.5e-08 Score=123.52 Aligned_cols=35 Identities=26% Similarity=0.427 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..+||||||||++|+++|++|++. |.+|+||||++
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~ 305 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRR-GWQVTLYCADE 305 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 348999999999999999999998 99999999975
No 50
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.73 E-value=4.2e-08 Score=107.98 Aligned_cols=36 Identities=39% Similarity=0.611 Sum_probs=33.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+|||||||||++|+++|..|++.+|.+|+|||+.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~ 73 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 73 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 358999999999999999999995589999999986
No 51
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.70 E-value=5.5e-08 Score=113.18 Aligned_cols=59 Identities=25% Similarity=0.268 Sum_probs=46.9
Q ss_pred HchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHH
Q psy4102 293 AFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLM 360 (1049)
Q Consensus 293 ~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl 360 (1049)
..|...+++.|++|+++++|++|..+ +++++||.. +|+ ++.|+ .||+|+|+..+.+||.
T Consensus 200 ~~l~~~~~~~G~~i~~~~~V~~i~~~----~~~~~gv~~--~g~--~~~ad-~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 200 DALETVISANGGKIHTGQEVSKILIE----NGKAAGIIA--DDR--IHDAD-LVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEE----TTEEEEEEE--TTE--EEECS-EEEECSCHHHHHHHTT
T ss_pred HHHHHHHHHcCCEEEECCceeEEEEE----CCEEEEEEE--CCE--EEECC-EEEECCCHHHHHHhcC
Confidence 34445566789999999999999987 478989876 454 58897 5999999988887654
No 52
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.69 E-value=4e-08 Score=121.78 Aligned_cols=35 Identities=29% Similarity=0.331 Sum_probs=33.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++||||||||++|+++|++|++. |.+|+||||++
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~ 297 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR-GAVVTLYCADA 297 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT-TCCEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 458999999999999999999998 99999999975
No 53
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.67 E-value=7.8e-09 Score=123.32 Aligned_cols=264 Identities=13% Similarity=0.058 Sum_probs=161.6
Q ss_pred cHHHHhhhcccCCCCCceEEE------EEeecCC-CeeeEEEEEE-cC---e-----eEEEEEeeccccchHHHHHhcC-
Q psy4102 600 RDRIFNTLYKPLINAETWTIL------PLLLRPL-STGNGIRIVF-EN---L-----DKVLVIRRFSCPSCHILVLSSG- 662 (1049)
Q Consensus 600 r~~~~~~y~~p~~~r~nl~v~------~il~~~~-sratGV~~~~-~~---~-----~keVilsaGai~SPqILlL~SG- 662 (1049)
|.++..+|+.++..++|++|+ +|+++.. .+++||++.. ++ . .++||+++|+++||+|||+ ||
T Consensus 220 r~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~-Sg~ 298 (504)
T 1n4w_A 220 KQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVR-ARD 298 (504)
T ss_dssp BCCTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHH-HHH
T ss_pred ccCHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHHh-ccc
Confidence 555566777777667777665 4888753 4899999974 33 1 5689999999999999998 99
Q ss_pred CCCHHHHhhCCCCccccCCcccccccccccceeEEEEcCccccchhhHHHHhhccccCCCCccccccccchhhhhhccCC
Q psy4102 663 IGPEEHLQGLNIPIIKNLSVGHNLQDHVGLGGLTFIVDGPVTFKKERYQVLLCLSERTDDSTYSTYTNTLFPRYIRLQSK 742 (1049)
Q Consensus 663 IGP~~~L~~~GIpvv~DLPVG~NLqDH~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (1049)
|| |||++.| .||+|||||+.+... +......... ... ... .... +....
T Consensus 299 ig--------~i~~~~~-~VG~nl~dh~~~~~~-~~~~~~~~~~-----------~~~--~~~---~~~~---~~~~~-- 347 (504)
T 1n4w_A 299 TG--------TLPNLNS-EVGAGWGPNGNIMTA-RANHMWNPTG-----------AHQ--SSI---PALG---IDAWD-- 347 (504)
T ss_dssp TT--------SSTTCCT-TTTCCBBCTTCEEEE-EECCTTCCCC-----------SCC--CSS---CCEE---EEECC--
T ss_pred cC--------CCCCCCh-hhccccccCCcceee-eccCCCCccc-----------CcC--CCc---cEEE---EeccC--
Confidence 99 7997744 499999999976432 2111000000 000 000 0000 00000
Q ss_pred CCCCCCCcccccccccccHHHHHhhhhhhhccccccceEEEEEecCCCCCCCCccccCCCCChhhHHHHHHHHH-HHHHh
Q psy4102 743 NPLHYPLIEPNYFQHRRDIETLIEGIRIAFNVSASAAFKKYIRLQSKNPLHYPLIEPNYFQHRRDIETLIEGIR-IAFNV 821 (1049)
Q Consensus 743 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~v~l~S~~p~~~P~i~~~~l~~~~D~~~l~~g~~-~~~~i 821 (1049)
++ ..+...+.+.. ...+. ... ..+.....+.++|+|+|+|.++ .|+++|+.++ | ..++++++ ..+++
T Consensus 348 ~~-~~~~~~~~~~~-~~~~~---~~~-~~~~~~~~p~srG~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i 415 (504)
T 1n4w_A 348 NS-DSSVFAEIAPM-PAGLE---TWV-SLYLAITKNPQRGTFVYDAATD----RAKLNWTRDQ-N-APAVNAAKALFDRI 415 (504)
T ss_dssp SS-TTCEEEEEECC-CCSSC---CCE-EEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHH
T ss_pred CC-CCceEEEeccC-ChHHH---hhh-hhheeeeccCCCcEEEecCCCC----ceEeccCCCc-C-HHHHHHHHHHHHHH
Confidence 00 00111111000 00000 000 0011112346789999999765 5889999988 8 77888888 66666
Q ss_pred hcChhhhhccCCCCCCCCCCCcccccccHHHHHhhhcccceeEeeccCCCCCCCCCCCCCccccccccccccceEeeccc
Q psy4102 822 SASAAFQKYNSRPLLTPMPGCAMFELFSDEYWECSLRHFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGLRVIDAS 901 (1049)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~pg~~~~~~~s~~~~~~~~~~~s~~~~H~~st~~m~p~~d~~~vvD~~~~v~gv~~lRvvdas 901 (1049)
.++... + ++. +. +.+. . +
T Consensus 416 ~~~~~~--~---------~~~-----------------------------------~~--~~~~-~-----~-------- 433 (504)
T 1n4w_A 416 NKANGT--I---------YRY-----------------------------------DL--FGTQ-L-----K-------- 433 (504)
T ss_dssp HHHHTC--C---------BCC-----------------------------------SS--SSSS-C-----C--------
T ss_pred HhccCC--C---------cCC-----------------------------------ch--hhhh-h-----h--------
Confidence 543321 0 000 00 0000 0 0
Q ss_pred cCCccccCCCCCCccccccccccchhcccccCccCCCCCCcccccCCCceeeccCCceEeeccccCCCCCCCchhHHHHH
Q psy4102 902 IMPIIVSGNPNAPTIMIGEKGADMTSRYTIRPALMGPATDLEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMI 981 (1049)
Q Consensus 902 ~~p~~~~~~~~~~~~~i~e~~~d~i~~~~~~tcrMGp~~d~~~VVD~~LRV~Gv~nLRVvDASImP~~~sgNt~atv~mI 981 (1049)
+. ......|.++||||| +|||++||||||+|||||||||||+++++||++|+|||
T Consensus 434 ------------------~~-~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~ai 488 (504)
T 1n4w_A 434 ------------------AF-ADDFCYHPLGGCVLG------KATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITAL 488 (504)
T ss_dssp ------------------SE-ECSEESSCBCSSCTT------TTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHH
T ss_pred ------------------hh-ccCccccccCCceee------eEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHH
Confidence 00 000012346899999 79999999999999999999999999999999999999
Q ss_pred HHHHHHHhHhhhc
Q psy4102 982 GEKGADMKQSYLD 994 (1049)
Q Consensus 982 aEraAd~I~~~~~ 994 (1049)
|||+||+|++.+.
T Consensus 489 AeraAd~I~~~~~ 501 (504)
T 1n4w_A 489 AERNVERIIKQDV 501 (504)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhc
Confidence 9999999987765
No 54
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.67 E-value=3.4e-08 Score=113.18 Aligned_cols=61 Identities=20% Similarity=0.284 Sum_probs=47.4
Q ss_pred hhHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchH
Q psy4102 290 TSKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSP 356 (1049)
Q Consensus 290 ~~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp 356 (1049)
....+|...+.+.|++++.+++|+.++.+ ++++++|....+++..+++|+ -||-|.| ..|.
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~----~~~~~~v~~~~~~~~~~~~a~-~vIgAdG-~~S~ 163 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKE----NGKVAGAKIRHNNEIVDVRAK-MVIAADG-FESE 163 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEE----TTEEEEEEEEETTEEEEEEEE-EEEECCC-TTCH
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeec----cceeeeeeecccccceEEEEe-EEEeCCc-cccH
Confidence 34456666677789999999999999887 578999988888888899995 4666666 4553
No 55
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.67 E-value=6.9e-08 Score=111.62 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=33.0
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
+|||||||||++|+++|.+|++. |.+|+|||+++.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~-G~~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 58999999999999999999998 999999999873
No 56
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.63 E-value=5.7e-08 Score=111.74 Aligned_cols=67 Identities=18% Similarity=0.247 Sum_probs=50.3
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
...+|...+++.|++|+.+++|++|..+ +++++||.+...+...+++|+ .||.|+|... .+....|+
T Consensus 104 l~~~L~~~~~~~gv~i~~~~~v~~i~~~----~~~v~gv~~~~~~~~~~~~a~-~vV~A~G~~s--~~~~~~g~ 170 (397)
T 3cgv_A 104 FDKHLAALAAKAGADVWVKSPALGVIKE----NGKVAGAKIRHNNEIVDVRAK-MVIAADGFES--EFGRWAGL 170 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEE----TTEEEEEEEEETTEEEEEEEE-EEEECCCTTC--HHHHHHTC
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEe----CCEEEEEEEEECCeEEEEEcC-EEEECCCcch--HhHHhcCC
Confidence 4445656666789999999999999887 578999998776666789996 6999999654 33333344
No 57
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.63 E-value=1.4e-07 Score=112.43 Aligned_cols=60 Identities=12% Similarity=0.122 Sum_probs=41.8
Q ss_pred HchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHH
Q psy4102 293 AFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLM 360 (1049)
Q Consensus 293 ~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl 360 (1049)
..|...+++.|++|+++++|++|+.+ +++++||++. +|+ ++.|+ .||++++...+.+.|+
T Consensus 225 ~aL~~~~~~~Gg~I~~~~~V~~I~~~----~~~~~gV~~~-~g~--~~~ad-~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 225 QGMIKLFQDLGGEVVLNARVSHMETT----GNKIEAVHLE-DGR--RFLTQ-AVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEE----TTEEEEEEET-TSC--EEECS-CEEECCC---------
T ss_pred HHHHHHHHHhCCceeeecceeEEEee----CCeEEEEEec-CCc--EEEcC-EEEECCCHHHHHHHhc
Confidence 34555667889999999999999998 5899999874 555 57897 5999999887776665
No 58
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.60 E-value=1.1e-07 Score=106.40 Aligned_cols=36 Identities=42% Similarity=0.645 Sum_probs=33.2
Q ss_pred CCccEEEECCChhHHHHHHHHhcC-CCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSEN-PDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~ 124 (1049)
.+|||||||||++|+++|..|++. +|.+|+|||+++
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 369999999999999999999995 689999999986
No 59
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.57 E-value=6e-08 Score=110.64 Aligned_cols=35 Identities=31% Similarity=0.550 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
+|||||||||.+|+++|++|++. |.+|+|||++..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~-G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA-GLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT-TCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCC
Confidence 48999999999999999999998 999999999864
No 60
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.55 E-value=9.3e-08 Score=114.75 Aligned_cols=35 Identities=26% Similarity=0.348 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+|||||||||.||+.+|..|++. |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~-G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM-GAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCCEEEEEecc
Confidence 469999999999999999999998 99999999974
No 61
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.44 E-value=3.6e-07 Score=110.11 Aligned_cols=36 Identities=28% Similarity=0.388 Sum_probs=33.4
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+.+|||||||||.||+.+|..|++. |.+|+|||++.
T Consensus 26 ~~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 61 (651)
T 3ces_A 26 PDPFDVIIIGGGHAGTEAAMAAARM-GQQTLLLTHNI 61 (651)
T ss_dssp SSCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CCcCCEEEECChHHHHHHHHHHHhC-CCCEEEEeecc
Confidence 3579999999999999999999998 99999999974
No 62
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.43 E-value=1.1e-06 Score=106.35 Aligned_cols=58 Identities=16% Similarity=0.212 Sum_probs=46.1
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCc
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 353 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~ 353 (1049)
...+|...+++.|++|+.+++|++|..+ ++.+++|.+..+|+..+++|+ .||.|+|+.
T Consensus 130 l~~~L~~~a~~~Gv~i~~g~~V~~v~~~----~g~~~~V~~~~~G~~~~i~Ad-lVV~AdG~~ 187 (591)
T 3i3l_A 130 FDKLLLDEARSRGITVHEETPVTDVDLS----DPDRVVLTVRRGGESVTVESD-FVIDAGGSG 187 (591)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEECC----STTCEEEEEEETTEEEEEEES-EEEECCGGG
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEc----CCCEEEEEEecCCceEEEEcC-EEEECCCCc
Confidence 4455666667789999999999999876 356778888767877789997 599999973
No 63
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.41 E-value=7.2e-07 Score=99.10 Aligned_cols=36 Identities=39% Similarity=0.638 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcC-CCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSEN-PDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~ 124 (1049)
.+|||+|||||++|+++|..|++. +|.+|+|+|+.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 468999999999999999999984 489999999986
No 64
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.41 E-value=2.8e-07 Score=108.45 Aligned_cols=59 Identities=12% Similarity=0.142 Sum_probs=46.5
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcc
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAIN 354 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~ 354 (1049)
....|...+.+.|++|+.+++|++|..+ +++++||.+.. +|+..+++|+ .||.|+|+..
T Consensus 102 l~~~L~~~a~~~gv~i~~~~~v~~i~~~----~~~v~gv~~~~~~~G~~~~~~ad-~VV~AdG~~s 162 (453)
T 3atr_A 102 YNQRVLKEAQDRGVEIWDLTTAMKPIFE----DGYVKGAVLFNRRTNEELTVYSK-VVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEE----TTEEEEEEEEETTTTEEEEEECS-EEEECCGGGC
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEE----CCEEEEEEEEEcCCCceEEEEcC-EEEECcCCch
Confidence 3345555566689999999999999887 46899998875 6776789997 6999999743
No 65
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.40 E-value=1.1e-06 Score=105.15 Aligned_cols=58 Identities=21% Similarity=0.352 Sum_probs=46.7
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEcCeEEEEcCCCc
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAI 353 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~-~g~~~~v~A~k~VILAAGa~ 353 (1049)
...+|...+++.|++|+.+++|++|..+ +++++||.+.. +|+..+++|+ .||.|+|..
T Consensus 113 l~~~L~~~a~~~Gv~i~~~~~V~~v~~~----~~~v~gv~~~~~dG~~~~i~ad-~VI~AdG~~ 171 (512)
T 3e1t_A 113 FDDMLLRNSERKGVDVRERHEVIDVLFE----GERAVGVRYRNTEGVELMAHAR-FIVDASGNR 171 (512)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEEE----TTEEEEEEEECSSSCEEEEEEE-EEEECCCTT
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEE----CCEEEEEEEEeCCCCEEEEEcC-EEEECCCcc
Confidence 4455666666789999999999999987 57899998875 5666789996 699999974
No 66
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.40 E-value=5e-07 Score=109.60 Aligned_cols=72 Identities=18% Similarity=0.131 Sum_probs=51.5
Q ss_pred hhHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe-----CCeE-------EEEEcCeEEEEcCCCcchH-
Q psy4102 290 TSKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-----DGRK-------HIIRAKKEIISSAGAINSP- 356 (1049)
Q Consensus 290 ~~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~-----~g~~-------~~v~A~k~VILAAGa~~Tp- 356 (1049)
....+|...+++.|++|+.++.|++|+.+ ++++++||.+.+ +|+. .+++|+ .||+|.|+...-
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~---~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad-~VV~AdG~~S~vr 220 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFH---EDGSVKGIATNDVGIQKDGAPKTTFERGLELHAK-VTIFAEGCHGHLA 220 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC---TTSSEEEEEECCEEECTTSCEEEEEECCCEEECS-EEEECCCTTCHHH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEc---CCCCEEEEEeCCccccCCCCcccccCCceEEECC-EEEEeeCCCchHH
Confidence 34455666666779999999999999987 346899998752 4432 468996 699999987652
Q ss_pred -HHHHhCCCC
Q psy4102 357 -QLLMVSGIG 365 (1049)
Q Consensus 357 -~LLl~SGIG 365 (1049)
+|+..-|+.
T Consensus 221 ~~l~~~~gl~ 230 (584)
T 2gmh_A 221 KQLYKKFDLR 230 (584)
T ss_dssp HHHHHHTTTT
T ss_pred HHHHHHhCCC
Confidence 444444553
No 67
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.38 E-value=1.2e-06 Score=101.67 Aligned_cols=35 Identities=34% Similarity=0.608 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+|||||||||++|+++|..|++. |.+|+|||+.+
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~-G~~V~v~E~~~ 38 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKS-GFKVKIVEKQK 38 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 358999999999999999999998 99999999986
No 68
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.36 E-value=2.1e-06 Score=99.76 Aligned_cols=57 Identities=18% Similarity=0.177 Sum_probs=43.2
Q ss_pred HchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHH
Q psy4102 293 AFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLM 360 (1049)
Q Consensus 293 ~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl 360 (1049)
..|...+++.|++|+++++|++|..+ ++++ | ..+|+ ++.|+ .||+|+|...+++||-
T Consensus 193 ~~l~~~~~~~G~~i~~~~~V~~i~~~----~~~v--V--~~~g~--~~~ad-~Vv~a~~~~~~~~ll~ 249 (421)
T 3nrn_A 193 DELERIIMENKGKILTRKEVVEINIE----EKKV--Y--TRDNE--EYSFD-VAISNVGVRETVKLIG 249 (421)
T ss_dssp HHHHHHHHTTTCEEESSCCEEEEETT----TTEE--E--ETTCC--EEECS-EEEECSCHHHHHHHHC
T ss_pred HHHHHHHHHCCCEEEcCCeEEEEEEE----CCEE--E--EeCCc--EEEeC-EEEECCCHHHHHHhcC
Confidence 34545567789999999999999876 4555 4 34554 58897 5999999988888663
No 69
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.32 E-value=1.9e-06 Score=103.90 Aligned_cols=36 Identities=36% Similarity=0.502 Sum_probs=32.9
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..+|||||||||.||+.+|..|++. |.+|+|||+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 54 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARG-GLHCLLITSDL 54 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred cCcCCEEEECccHHHHHHHHHHHHC-CCcEEEEEecc
Confidence 4569999999999999999999998 99999999974
No 70
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.29 E-value=2.2e-06 Score=100.30 Aligned_cols=43 Identities=23% Similarity=0.309 Sum_probs=37.7
Q ss_pred cccCCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 85 KTLLRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 85 ~~~~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
..++++|||||||+|.+|+++|.+|++. |++|+||||++..++
T Consensus 15 ~~~~~~~dv~iiG~G~~g~~~a~~l~~~-g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 15 YFQGEHYDVIILGTGLKECILSGLLSHY-GKKILVLDRNPYYGG 57 (475)
T ss_dssp --CCCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCG
T ss_pred ccccccCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeccCCCCC
Confidence 3456789999999999999999999998 999999999987664
No 71
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.28 E-value=1.7e-05 Score=95.12 Aligned_cols=36 Identities=28% Similarity=0.445 Sum_probs=33.5
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.++||||||||++|+++|..|++. |.+|+||||.+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~-G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ-GVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 469999999999999999999998 999999999863
No 72
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.26 E-value=2.8e-07 Score=109.94 Aligned_cols=260 Identities=14% Similarity=0.091 Sum_probs=155.9
Q ss_pred cHHHHhhhcccCCCCCceEEE------EEeecCCC-eeeEEEEEE-cC----e----eEEEEEeeccccchHHHHHhcC-
Q psy4102 600 RDRIFNTLYKPLINAETWTIL------PLLLRPLS-TGNGIRIVF-EN----L----DKVLVIRRFSCPSCHILVLSSG- 662 (1049)
Q Consensus 600 r~~~~~~y~~p~~~r~nl~v~------~il~~~~s-ratGV~~~~-~~----~----~keVilsaGai~SPqILlL~SG- 662 (1049)
|.++..+|+.++..++|++|+ +|+++... +++||++.. ++ . .++||+++|+++||+|||+ ||
T Consensus 225 R~s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~-Sg~ 303 (507)
T 1coy_A 225 KKSLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVS-MKA 303 (507)
T ss_dssp BCCTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHH-HHH
T ss_pred CcChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHHh-ccc
Confidence 555566778776667777655 48887643 799999986 44 1 5689999999999999998 99
Q ss_pred CCCHHHHhhCCCCccccC-C-cccccccccccceeEEEEcCccccchhhHHHHhhccccCCCCcccc-ccccchhhhhhc
Q psy4102 663 IGPEEHLQGLNIPIIKNL-S-VGHNLQDHVGLGGLTFIVDGPVTFKKERYQVLLCLSERTDDSTYST-YTNTLFPRYIRL 739 (1049)
Q Consensus 663 IGP~~~L~~~GIpvv~DL-P-VG~NLqDH~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 739 (1049)
|| ++| ++ + ||+||+||+.+.......... . ...+.. ........+.
T Consensus 304 iG--------~lp---nl~d~VG~~l~~h~~~~~~~~~~~~~----------------~--~~~~~~~~~~~~~~~~~-- 352 (507)
T 1coy_A 304 QG--------HLP---NLSSQVGEGWGNNGNIMVGRANHMWD----------------A--TGSKQATIPTMGIDNWA-- 352 (507)
T ss_dssp TT--------SST---TSCTTTTCCBBCTTEEEEEEECCTTS----------------C--CCSCCCSSCCEEEECTT--
T ss_pred CC--------CCC---ccChhhCCccccCCcccccccccccc----------------c--ccccCCCcceEEEeccC--
Confidence 99 456 55 4 999999998632111000000 0 000000 0000000000
Q ss_pred cCCCCCCCCCcccccccccccHHHHHhhhhhhhccccccceEEEEEecCCCCCCCCccccCCCCChhhHHHHHHHHH-HH
Q psy4102 740 QSKNPLHYPLIEPNYFQHRRDIETLIEGIRIAFNVSASAAFKKYIRLQSKNPLHYPLIEPNYFQHRRDIETLIEGIR-IA 818 (1049)
Q Consensus 740 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~v~l~S~~p~~~P~i~~~~l~~~~D~~~l~~g~~-~~ 818 (1049)
. + ..+...+.+.. ...+. .....+.....+.++|+|+|+|.++ .|+++|+.++ | ..++++++ ..
T Consensus 353 ~---~-~~~~~~~~~~~-~~~~~----~~~~~~~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~ 417 (507)
T 1coy_A 353 D---P-TAPIFAEIAPL-PAGLE----TYVSLYLAITKNPERARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKKVF 417 (507)
T ss_dssp C---T-TSCEEEEEECC-CCSSC----CCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHH
T ss_pred C---C-CCCcEEEeccC-CHHHh----hheeeeEEEeeeCCCcEEEEccCCC----ceeeccCCCC-c-HHHHHHHHHHH
Confidence 0 0 00111000000 00000 0000001112246789999998765 7899999998 8 56777777 66
Q ss_pred HHhhcChhhhhccCCCCCCCCCCCcccccccHHHHHhhhcccceeEeeccCCCCCCCCCCCCCccccccccccccceEee
Q psy4102 819 FNVSASAAFQKYNSRPLLTPMPGCAMFELFSDEYWECSLRHFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGLRVI 898 (1049)
Q Consensus 819 ~~i~~~~~~~~~~~~~~~~~~pg~~~~~~~s~~~~~~~~~~~s~~~~H~~st~~m~p~~d~~~vvD~~~~v~gv~~lRvv 898 (1049)
+++.++... +.. .+. ..+ |.+. +
T Consensus 418 ~~i~~~~~~--~~~----~~~-------~~~----------------------------------d~~~--~-------- 440 (507)
T 1coy_A 418 DKINQKEGT--IYR----TDL-------FGV----------------------------------YYKT--W-------- 440 (507)
T ss_dssp HHHHHHHTC--CBC----SSC-------C------------------------------------CCCS--S--------
T ss_pred HHHHhhcCC--ccc----Ccc-------ccc----------------------------------chhh--h--------
Confidence 666553320 000 000 000 0000 0
Q ss_pred ccccCCccccCCCCCCccccccccccchhcccccCccCCCCCCcccccCCCceeeccCCceEeeccccCCCCCCCchhHH
Q psy4102 899 DASIMPIIVSGNPNAPTIMIGEKGADMTSRYTIRPALMGPATDLEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPT 978 (1049)
Q Consensus 899 das~~p~~~~~~~~~~~~~i~e~~~d~i~~~~~~tcrMGp~~d~~~VVD~~LRV~Gv~nLRVvDASImP~~~sgNt~atv 978 (1049)
......|.++||||| +|||++||||||+|||||||||||+++++||++|+
T Consensus 441 ------------------------~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti 490 (507)
T 1coy_A 441 ------------------------GDDFTYHPLGGVLLN------KATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTI 490 (507)
T ss_dssp ------------------------BCSEESCCBCSSCTT------TTSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHH
T ss_pred ------------------------cccccccccCCcchh------heECCCCeEeccCCeEEeechhccCCCCcChHHHH
Confidence 000012346899999 39999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhhh
Q psy4102 979 IMIGEKGADMKQSYL 993 (1049)
Q Consensus 979 ~mIaEraAd~I~~~~ 993 (1049)
||||||+||+|++..
T Consensus 491 ~alAeraAd~I~~~~ 505 (507)
T 1coy_A 491 TALAERNMDKIISSD 505 (507)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998653
No 73
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.25 E-value=9.4e-07 Score=102.29 Aligned_cols=36 Identities=47% Similarity=0.785 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcC-CCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSEN-PDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~ 124 (1049)
.++||||||||++|+++|+.|++. ||.+|+|||++.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 359999999999999999999984 589999999985
No 74
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.18 E-value=2.3e-06 Score=96.35 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=32.4
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.||+||||||++|+++|..|++. |.+|+|+|+.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS-GLSYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS-SCCEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 48999999999999999999998 99999999986
No 75
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.17 E-value=3.5e-05 Score=92.15 Aligned_cols=68 Identities=12% Similarity=0.148 Sum_probs=49.0
Q ss_pred HchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHH-HHHhCCC
Q psy4102 293 AFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQ-LLMVSGI 364 (1049)
Q Consensus 293 ~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~-LLl~SGI 364 (1049)
..+....++.|++|++++.|++|..+ +++++.|+.+..++.+.++.++. ||+|+|..-+.. +|...|+
T Consensus 259 ~~l~~~l~~~GV~i~~~~~V~~i~~~---~~~~v~~~~v~~~~G~~~i~aD~-Vv~A~G~~p~~~~~l~~~gl 327 (523)
T 1mo9_A 259 AYVLDRMKEQGMEIISGSNVTRIEED---ANGRVQAVVAMTPNGEMRIETDF-VFLGLGEQPRSAELAKILGL 327 (523)
T ss_dssp HHHHHHHHHTTCEEESSCEEEEEEEC---TTSBEEEEEEEETTEEEEEECSC-EEECCCCEECCHHHHHHHTC
T ss_pred HHHHHHHHhCCcEEEECCEEEEEEEc---CCCceEEEEEEECCCcEEEEcCE-EEECcCCccCCccCHHHcCC
Confidence 34555667889999999999999865 24567666554433324689974 999999876666 6777776
No 76
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.16 E-value=2.2e-06 Score=96.02 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=32.7
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
++||||||||++|+++|..|++. |.+|+||||.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHC-CCcEEEEECCCC
Confidence 37999999999999999999998 999999999864
No 77
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.15 E-value=1.7e-05 Score=84.16 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=32.3
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+|||||||||++|+.+|..|++. |.+|+|||++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 58999999999999999999998 99999999974
No 78
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.11 E-value=2.8e-05 Score=93.78 Aligned_cols=36 Identities=25% Similarity=0.406 Sum_probs=31.5
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.+|||||||||++|+++|..|++. |.+|+|||+.+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~-G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG-GVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT-TCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEcCCCC
Confidence 469999999999999999999998 999999999863
No 79
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.10 E-value=3.4e-06 Score=95.09 Aligned_cols=34 Identities=21% Similarity=0.416 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHHhc---CCCCeEEEEccCCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSE---NPDWKILLIEAGGD 125 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae---~~G~kVLVLEaG~~ 125 (1049)
+||+|||||++|+++|+.|++ . |.+|+|+||++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-PLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-CEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-CceEEEEECCCC
Confidence 599999999999999999999 7 999999999863
No 80
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.09 E-value=2.2e-06 Score=98.59 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+|||||||||++|+++|..|++. |.+|+|||+.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 48999999999999999999998 99999999976
No 81
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.05 E-value=2.6e-05 Score=92.61 Aligned_cols=37 Identities=27% Similarity=0.349 Sum_probs=34.4
Q ss_pred cCCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 87 LLRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 87 ~~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+..++||||||||++|+++|..|++. |.+|+||||.+
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~ 44 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLA-GVEVVVLERLV 44 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 35679999999999999999999998 99999999986
No 82
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.99 E-value=1.8e-05 Score=91.08 Aligned_cols=35 Identities=23% Similarity=0.482 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++||||||||++|+++|..|++. |.+|+|+|+.+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~V~viE~~~ 39 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQ-GHRVVVVEQAR 39 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 358999999999999999999998 99999999986
No 83
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.99 E-value=4.1e-06 Score=99.56 Aligned_cols=36 Identities=25% Similarity=0.315 Sum_probs=33.6
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
...+||+|||||++|+++|..|++. |.+|+|||+.+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liEk~~ 125 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL-GARVVLVEKRI 125 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 3568999999999999999999998 99999999986
No 84
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.98 E-value=3.9e-06 Score=89.51 Aligned_cols=36 Identities=22% Similarity=0.387 Sum_probs=33.5
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDE 126 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~ 126 (1049)
++||+|||||+||+++|..|++. |.+|+|+||.+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCC
Confidence 48999999999999999999999 9999999998754
No 85
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.95 E-value=1.5e-05 Score=95.69 Aligned_cols=35 Identities=43% Similarity=0.532 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..+||||||||++|+.+|.+|++. |.+|+|||+++
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQA-GMKVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 468999999999999999999997 99999999986
No 86
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.93 E-value=6.2e-05 Score=89.42 Aligned_cols=36 Identities=28% Similarity=0.408 Sum_probs=33.3
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..++||||||||++|+++|..|++. |.+|+||||.+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~ 45 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLG-GVDVMVLEQLP 45 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 4579999999999999999999998 99999999986
No 87
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.92 E-value=3.4e-06 Score=101.43 Aligned_cols=36 Identities=31% Similarity=0.531 Sum_probs=32.9
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
...+||||||||++|+.+|.+|++. |.+|+|||+.+
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~ 54 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQ-GLTVRAFEAAS 54 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 3468999999999999999999997 99999999986
No 88
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.90 E-value=2.4e-05 Score=92.17 Aligned_cols=35 Identities=40% Similarity=0.676 Sum_probs=32.5
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+||+||||||++|+++|.+|++. |.+|+|+|+.+
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~-G~~V~liEk~~ 37 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA-KYNVLMADPKG 37 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECTTS
T ss_pred ccceEEEECCCHHHHHHHHHHHhC-CCeEEEEECCC
Confidence 359999999999999999999998 99999999765
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.88 E-value=3.1e-06 Score=101.48 Aligned_cols=35 Identities=26% Similarity=0.379 Sum_probs=32.3
Q ss_pred CCccEEEECCChhHHHHHHHHh-cCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLS-ENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLa-e~~G~kVLVLEaG~ 124 (1049)
..+||||||||++|+.+|.+|+ +. |.+|+|||+.+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~-G~~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHEL-GLTTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEECCC
Confidence 3589999999999999999999 76 99999999986
No 90
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.88 E-value=3.8e-05 Score=89.96 Aligned_cols=36 Identities=31% Similarity=0.469 Sum_probs=33.1
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCC--eEEEEccCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDW--KILLIEAGGD 125 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~--kVLVLEaG~~ 125 (1049)
..+||+|||||++|+++|..|++. |. +|+|+|+.+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-G~~~~V~v~E~~~~ 42 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-KAFDQVTLFERRGS 42 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCCSEEEEECSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCCCeEEEecCCC
Confidence 358999999999999999999998 88 9999999864
No 91
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.87 E-value=0.00012 Score=85.90 Aligned_cols=37 Identities=22% Similarity=0.337 Sum_probs=33.9
Q ss_pred CccEEEECCChhHHHHHHHHhcCCC------CeEEEEccCCCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPD------WKILLIEAGGDEN 127 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G------~kVLVLEaG~~~~ 127 (1049)
.+||||||||.+|+++|++|+++ | .+|+|||+.+...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-IKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-ccccCCCCCEEEEECCCCCC
Confidence 48999999999999999999998 7 9999999987654
No 92
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.85 E-value=0.00017 Score=86.66 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=32.9
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++||||||||++|+++|..|++. |.+|+||||.+
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~-G~~V~vlEr~~ 59 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR-QVGHLVVEQTD 59 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 358999999999999999999998 99999999986
No 93
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.82 E-value=5.7e-05 Score=88.75 Aligned_cols=36 Identities=28% Similarity=0.483 Sum_probs=33.3
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCC-----CeEEEEccCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPD-----WKILLIEAGGD 125 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G-----~kVLVLEaG~~ 125 (1049)
+.|||||||||++|+++|..|++. | .+|+|||+.+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQGD 69 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCCC
Confidence 468999999999999999999998 7 89999999874
No 94
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.82 E-value=5.6e-05 Score=92.63 Aligned_cols=36 Identities=25% Similarity=0.486 Sum_probs=33.5
Q ss_pred CCCccEEEECCChhHHHHHHHHhc-CCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSE-NPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae-~~G~kVLVLEaG~ 124 (1049)
.+++||||||||++|+++|..|++ . |.+|+||||.+
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~ 66 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKE 66 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSS
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 356999999999999999999999 8 99999999986
No 95
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.82 E-value=8.5e-05 Score=86.00 Aligned_cols=66 Identities=18% Similarity=0.253 Sum_probs=52.4
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
...++....++.|++|++++.|++|..+ ++++++|++. +|+ ++.++ .||+|+|..-...+|..+|+
T Consensus 196 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~----~~~v~~v~l~-dG~--~i~aD-~Vv~a~G~~p~~~l~~~~gl 261 (415)
T 3lxd_A 196 LSEFYQAEHRAHGVDLRTGAAMDCIEGD----GTKVTGVRMQ-DGS--VIPAD-IVIVGIGIVPCVGALISAGA 261 (415)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEES----SSBEEEEEES-SSC--EEECS-EEEECSCCEESCHHHHHTTC
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEec----CCcEEEEEeC-CCC--EEEcC-EEEECCCCccChHHHHhCCC
Confidence 3345556677889999999999999876 4688888873 454 58897 59999998877788888887
No 96
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.79 E-value=2.3e-05 Score=94.13 Aligned_cols=36 Identities=33% Similarity=0.490 Sum_probs=33.5
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..++||||||||++|+++|.+|++. |.+|+|+|+++
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~ 49 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAG 49 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 3469999999999999999999998 99999999986
No 97
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.78 E-value=3.8e-05 Score=87.10 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=32.0
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
+||++|||||++|+++|.+|++. |. +|+|||+.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-GITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-CCCcEEEEecCC
Confidence 58999999999999999999998 88 999999975
No 98
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.76 E-value=9.5e-05 Score=88.45 Aligned_cols=54 Identities=9% Similarity=0.049 Sum_probs=39.1
Q ss_pred hHHchHHhhhc-CCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCC
Q psy4102 291 SKAFLRPIRLR-KNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGA 352 (1049)
Q Consensus 291 ~~~~L~~~~~~-~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa 352 (1049)
...+|...+++ .|++++.+ +|++|..+ +++.+++|... +|+ +++|+ .||.|+|+
T Consensus 177 l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~---~~g~~~~v~~~-~g~--~i~ad-~vV~AdG~ 231 (526)
T 2pyx_A 177 FSQLLTEHCTQKLGVTHIRD-HVSQIINN---QHGDIEKLITK-QNG--EISGQ-LFIDCTGA 231 (526)
T ss_dssp HHHHHHHHHHHTSCCEEEEC-CEEEEEEC---TTSCEEEEEES-SSC--EEECS-EEEECSGG
T ss_pred HHHHHHHHHHhcCCCEEEEe-EEEEEEec---CCCcEEEEEEC-CCC--EEEcC-EEEECCCc
Confidence 44456566666 89999999 59999876 24567777653 444 38897 59999996
No 99
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.76 E-value=2.1e-05 Score=87.91 Aligned_cols=36 Identities=25% Similarity=0.239 Sum_probs=33.0
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+..+||||||||++|+++|..|++. |.+|+|+|+.+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~vie~~~ 55 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARA-EIKPILYEGMM 55 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 4569999999999999999999998 99999999975
No 100
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.74 E-value=8.5e-05 Score=82.60 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=32.3
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+|+||||||++|+++|..|++. |.+|+|+|+.+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-QASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCC
Confidence 58999999999999999999998 99999999986
No 101
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.73 E-value=7.8e-05 Score=87.71 Aligned_cols=66 Identities=8% Similarity=0.146 Sum_probs=45.1
Q ss_pred hhHHchHHhhhcCCcE--EecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHH
Q psy4102 290 TSKAFLRPIRLRKNLH--IAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLL 359 (1049)
Q Consensus 290 ~~~~~L~~~~~~~nl~--I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LL 359 (1049)
....|+...+++.|++ |+.++.|++|..++ ++...-|.+.. +|+..++.++ .||+|+|.+..|.+.
T Consensus 102 ~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~---~~~~~~V~~~~~~~g~~~~~~~d-~VVvAtG~~s~p~~p 171 (464)
T 2xve_A 102 VLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNE---DSQTFTVTVQDHTTDTIYSEEFD-YVVCCTGHFSTPYVP 171 (464)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSEEEEEEEEET---TTTEEEEEEEETTTTEEEEEEES-EEEECCCSSSSBCCC
T ss_pred HHHHHHHHHHHHcCCcceEEeCCEEEEEEEcC---CCCcEEEEEEEcCCCceEEEEcC-EEEECCCCCCCCccC
Confidence 3445666666666887 99999999998762 22122355544 3655678897 599999987777644
No 102
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.68 E-value=2e-05 Score=87.44 Aligned_cols=35 Identities=37% Similarity=0.535 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+||+||||||+||+++|.+|++. |++|+|+|++.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~-g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA-NLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 369999999999999999999998 99999999974
No 103
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.67 E-value=2.1e-05 Score=87.00 Aligned_cols=36 Identities=31% Similarity=0.396 Sum_probs=32.4
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||||||||+||++||.+|++. |++|+|+|++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~-g~~v~lie~~~ 39 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRA-RKQIALFDNNT 39 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 3569999999999999999999998 99999999975
No 104
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.67 E-value=2.6e-05 Score=91.55 Aligned_cols=42 Identities=26% Similarity=0.391 Sum_probs=38.0
Q ss_pred cCCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCCC
Q psy4102 87 LLRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENEI 129 (1049)
Q Consensus 87 ~~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~~ 129 (1049)
++.+|||||||||.+|+++|.+|+++ |++|+||||.+..++.
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~-G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCCCCCcc
Confidence 45679999999999999999999998 9999999999887653
No 105
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.67 E-value=2e-05 Score=87.30 Aligned_cols=36 Identities=25% Similarity=0.282 Sum_probs=33.5
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.||+||||||+||+++|.+|++. |++|+|+|++.
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~-g~~v~liE~~~ 37 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRS-SLKPVMYEGFM 37 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 4569999999999999999999998 99999999975
No 106
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.64 E-value=2.7e-05 Score=87.13 Aligned_cols=38 Identities=34% Similarity=0.567 Sum_probs=33.6
Q ss_pred CCccEEEECCChhHHHHHHHHhc-CCCCeEEEEccCCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSE-NPDWKILLIEAGGDE 126 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae-~~G~kVLVLEaG~~~ 126 (1049)
.++||+|||||+||+++|++|++ ..|.+|+|+||++..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 46899999999999999999985 459999999998743
No 107
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.64 E-value=0.00028 Score=81.38 Aligned_cols=65 Identities=11% Similarity=0.312 Sum_probs=51.7
Q ss_pred HHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 292 KAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 292 ~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
..++....++.|++|++++.|++|..+ ++++++|++ .+|+ ++.++ .||+|+|..-+..++..+|+
T Consensus 187 ~~~l~~~l~~~GV~i~~~~~v~~i~~~----~~~v~~V~~-~dG~--~i~aD-~Vv~a~G~~p~~~l~~~~gl 251 (404)
T 3fg2_P 187 SSYFHDRHSGAGIRMHYGVRATEIAAE----GDRVTGVVL-SDGN--TLPCD-LVVVGVGVIPNVEIAAAAGL 251 (404)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEEE----TTEEEEEEE-TTSC--EEECS-EEEECCCEEECCHHHHHTTC
T ss_pred HHHHHHHHHhCCcEEEECCEEEEEEec----CCcEEEEEe-CCCC--EEEcC-EEEECcCCccCHHHHHhCCC
Confidence 345556667889999999999999876 468888876 3554 57897 59999998777778888887
No 108
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.62 E-value=2e-05 Score=93.76 Aligned_cols=41 Identities=24% Similarity=0.406 Sum_probs=36.4
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENEI 129 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~~ 129 (1049)
..+||||||||.+|+++|++|++..|.+|+||||.+..++.
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGL 49 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCC
Confidence 46999999999999999999998449999999999877653
No 109
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.55 E-value=0.00028 Score=87.26 Aligned_cols=37 Identities=32% Similarity=0.526 Sum_probs=34.2
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
...+||||||||+||+.+|..|++. |.+|+|+|+++.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~-G~~V~liE~~~~ 425 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVR-GYDVVLAEAGRD 425 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCC
Confidence 4568999999999999999999998 999999999874
No 110
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.50 E-value=6.2e-05 Score=85.33 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=34.0
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
..++||||||||.+|+++|++|++. |.+|+||||...
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARK-GYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCEEEEEeccCC
Confidence 4579999999999999999999998 999999999863
No 111
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.42 E-value=7.1e-05 Score=86.92 Aligned_cols=36 Identities=39% Similarity=0.611 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDEN 127 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~ 127 (1049)
|||||||||++|+++|++|++. |.+|+||||.+...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G~~V~vlE~~~~~G 37 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-GKKVLLLEGGERLG 37 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSB
T ss_pred CCEEEECCcHHHHHHHHHHHHc-CCeEEEEecCCCcc
Confidence 7999999999999999999999 99999999976543
No 112
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.40 E-value=8.3e-05 Score=85.76 Aligned_cols=37 Identities=30% Similarity=0.274 Sum_probs=33.2
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.+.|||||||||++|+++|..|++. |.+|+||||.+.
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~E~~~~ 57 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-GIDCDVYEAVKE 57 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 4579999999999999999999998 999999999863
No 113
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.38 E-value=9.1e-05 Score=85.33 Aligned_cols=41 Identities=24% Similarity=0.464 Sum_probs=36.4
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
.+++|+||||||.+|+++|.+|++.+|.+|+|||+.+..++
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG 45 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGG 45 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 45799999999999999999999865899999999987654
No 114
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.37 E-value=0.00064 Score=78.95 Aligned_cols=35 Identities=34% Similarity=0.397 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHHHHhc--CCCCeEEEEccCCCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSE--NPDWKILLIEAGGDE 126 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae--~~G~kVLVLEaG~~~ 126 (1049)
.|+||||||.+|+++|.+|++ . |.+|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCC
Confidence 589999999999999999999 5 8999999998753
No 115
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.25 E-value=8.6e-05 Score=83.71 Aligned_cols=32 Identities=28% Similarity=0.269 Sum_probs=30.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCC------CeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPD------WKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G------~kVLVLEaG~ 124 (1049)
||||||||.+|+++|++|++. | .+|+|||++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCC
Confidence 899999999999999999998 5 8999999986
No 116
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.25 E-value=0.0015 Score=77.42 Aligned_cols=61 Identities=13% Similarity=0.203 Sum_probs=41.9
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCC-C--eEEEEEEEe--CCeEEEEEcCeEEEEcCCC
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPV-P--KAVGIEILR--DGRKHIIRAKKEIISSAGA 352 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~-~--rv~GV~~~~--~g~~~~v~A~k~VILAAGa 352 (1049)
...||...+++-+..|+.+++|+++..+..+.. . ..--|...+ .|+..++.|+ .||+|+|.
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar-~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTR-KVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEE-EEEECCCC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeC-EEEECcCC
Confidence 456887777777788999999999987632111 1 123344443 4667788896 69999994
No 117
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.21 E-value=0.00018 Score=81.83 Aligned_cols=38 Identities=39% Similarity=0.641 Sum_probs=34.4
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
+||++|||||.+|+++|.+|++. |.+|+|+|+++...+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG 38 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNHIGG 38 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSSSSSG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCcEEEEecCCCCCc
Confidence 37999999999999999999998 999999999876553
No 118
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.20 E-value=0.00021 Score=81.83 Aligned_cols=40 Identities=28% Similarity=0.644 Sum_probs=35.9
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
...+|++|||||++|+++|.+|++. |.+|+|||+.+...+
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASS-GQRVLIVDRRPHIGG 66 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSG
T ss_pred CCCCCEEEECccHHHHHHHHHHHHC-CCceEEEeccCCCCC
Confidence 4579999999999999999999998 999999999876543
No 119
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.18 E-value=0.00018 Score=85.19 Aligned_cols=35 Identities=37% Similarity=0.593 Sum_probs=31.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+||+||||||+||+++|.+|++. |.+|+|+|+.+
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~ 58 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQL-GMKVAVVEKRS 58 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 469999999999999999999998 99999999875
No 120
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.18 E-value=0.00017 Score=85.08 Aligned_cols=35 Identities=40% Similarity=0.512 Sum_probs=33.1
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+||+||||||++|+++|.+|++. |.+|+|+|+++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH-TCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCEEEEEeCCC
Confidence 469999999999999999999998 99999999986
No 121
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.17 E-value=0.00029 Score=82.06 Aligned_cols=42 Identities=24% Similarity=0.356 Sum_probs=37.3
Q ss_pred cCCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCCC
Q psy4102 87 LLRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENEI 129 (1049)
Q Consensus 87 ~~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~~ 129 (1049)
++.+||+||||+|.+|+++|.+|++. |++|+|+|+.+...+.
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPYYGGE 44 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCcccc
Confidence 45679999999999999999999998 9999999999876543
No 122
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.16 E-value=0.00021 Score=85.21 Aligned_cols=39 Identities=23% Similarity=0.458 Sum_probs=35.2
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
..+||||||||.+|+++|.+|++. |.+|+|||+.+...+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~GG 41 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRVGG 41 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSBT
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCCC
Confidence 468999999999999999999998 999999999876543
No 123
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.13 E-value=0.00023 Score=82.20 Aligned_cols=35 Identities=26% Similarity=0.428 Sum_probs=32.4
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCe-EEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWK-ILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~k-VLVLEaG~ 124 (1049)
..+||||||||++|+++|..|++. |.+ |+|||+.+
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~E~~~ 38 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQA-GIGKVTLLESSS 38 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCC
Confidence 358999999999999999999998 999 99999986
No 124
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.13 E-value=0.00021 Score=85.29 Aligned_cols=34 Identities=29% Similarity=0.584 Sum_probs=32.4
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+||+||||+|+||.++|.++|+. |+||+|||+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~-G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAH-GARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-TCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 59999999999999999999998 99999999875
No 125
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.13 E-value=0.00031 Score=83.02 Aligned_cols=40 Identities=25% Similarity=0.400 Sum_probs=36.1
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
...+||+|||||.+|+++|++|++. |.+|+|+|+.+...+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKA-GYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeccCCCCC
Confidence 4568999999999999999999998 899999999987654
No 126
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.13 E-value=0.00022 Score=79.02 Aligned_cols=37 Identities=22% Similarity=0.466 Sum_probs=33.2
Q ss_pred cCCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 87 LLRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 87 ~~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+..+||+||||||++|+++|..|++. |.+|+|+|+..
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 49 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARS-GFSVAILDKAV 49 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 45579999999999999999999998 89999999953
No 127
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.12 E-value=0.0003 Score=80.84 Aligned_cols=36 Identities=25% Similarity=0.436 Sum_probs=33.4
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.++||||||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 468999999999999999999998 999999999863
No 128
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.11 E-value=0.00033 Score=81.12 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=35.3
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCC-CeEEEEccCCCCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPD-WKILLIEAGGDENE 128 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G-~kVLVLEaG~~~~~ 128 (1049)
..+||||||||.+|+++|.+|++. | .+|+|+||.+...+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-GFHDYTILERTDHVGG 44 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSSCSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEECCCCCCC
Confidence 468999999999999999999998 8 89999999877653
No 129
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.10 E-value=0.00026 Score=83.63 Aligned_cols=35 Identities=26% Similarity=0.354 Sum_probs=32.5
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+||+||||||++|+++|.+|++. |.+|+|||++.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~ 59 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGAL-GKRVAIAEEYR 59 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-cCEEEEEeCCC
Confidence 469999999999999999999998 99999999943
No 130
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.07 E-value=0.0003 Score=83.29 Aligned_cols=35 Identities=26% Similarity=0.456 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+||+||||||+||+++|.+|++. |.+|+|+|+.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~-G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL-GKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEEecc
Confidence 469999999999999999999998 99999999865
No 131
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.06 E-value=0.00036 Score=79.59 Aligned_cols=35 Identities=31% Similarity=0.455 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.+||||||||++|+++|..|++. |.+|+|||+.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-GWDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEecCCC
Confidence 58999999999999999999998 999999999863
No 132
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.03 E-value=0.00034 Score=82.34 Aligned_cols=39 Identities=23% Similarity=0.390 Sum_probs=34.3
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
..+||||||||.+|+++|.+|++. |.+|+|||+.+...+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~-g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARLGG 53 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTT-TCCEEEECSSSSSBT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCCc
Confidence 468999999999999999999998 999999999886553
No 133
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.02 E-value=0.00037 Score=82.00 Aligned_cols=37 Identities=24% Similarity=0.425 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC--eEEEEccCCCCCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDW--KILLIEAGGDENE 128 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~--kVLVLEaG~~~~~ 128 (1049)
+||||||||.+|+++|++|++. |. +|+|||+.+...+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-G~~~~V~vlEa~~~~GG 41 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-PCPPKVVLVESSERLGG 41 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-SSCCEEEEECSSSSSBT
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCCCcEEEEeCCCCCCC
Confidence 6999999999999999999998 88 9999999876543
No 134
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.01 E-value=0.0018 Score=78.45 Aligned_cols=36 Identities=31% Similarity=0.500 Sum_probs=32.3
Q ss_pred CCccEEEECCChhHHHHHHHHhcC-CCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSEN-PDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~ 124 (1049)
...||||||||+||+++|.+|++. +|.+|+|+|+.+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 71 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE 71 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 357999999999999999999984 478999999986
No 135
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.00 E-value=0.00038 Score=81.75 Aligned_cols=34 Identities=29% Similarity=0.365 Sum_probs=32.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
.+||+||||||++|+++|.+|++. |.+|+|||++
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~-G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAAL-GKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 369999999999999999999998 9999999994
No 136
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=96.98 E-value=0.00047 Score=81.75 Aligned_cols=40 Identities=30% Similarity=0.407 Sum_probs=35.2
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
.+.+||||||||.+|+++|.+|++. |.+|+|+|+.+...+
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIH-GLNVTVFEAEGKAGG 50 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTT-SCEEEEECSSSSSCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEeCCCCCC
Confidence 4568999999999999999999998 999999999987654
No 137
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=96.98 E-value=0.00034 Score=83.40 Aligned_cols=38 Identities=34% Similarity=0.435 Sum_probs=34.9
Q ss_pred CccEEEECCChhHHHHHHHHhcCCC-CeEEEEccCCCCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPD-WKILLIEAGGDENE 128 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G-~kVLVLEaG~~~~~ 128 (1049)
.+||||||||.+|+++|.+|+++ | .+|+|||+.+..++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~-G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQN-GIQDCLVLEARDRVGG 46 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHT-TCCSEEEECSSSSSBT
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCCCCCC
Confidence 57999999999999999999998 8 99999999887654
No 138
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.98 E-value=0.00044 Score=78.09 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=33.4
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
...||+||||||++|+++|..|++. |.+|+|||+.+.
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~ 48 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMN-NISCRIIESMPQ 48 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCC
Confidence 4569999999999999999999998 999999999863
No 139
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.97 E-value=0.00041 Score=81.98 Aligned_cols=36 Identities=33% Similarity=0.430 Sum_probs=33.0
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..+||+||||||+||+++|.+|++. |.+|+|+|++.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~-G~~V~liEk~~ 42 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLN-GARVACLDFVK 42 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 3579999999999999999999998 99999999764
No 140
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=96.97 E-value=0.0004 Score=82.22 Aligned_cols=39 Identities=33% Similarity=0.515 Sum_probs=35.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
+++||||||||.+|+++|.+|++. |.+|+|||+.+..++
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~GG 76 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVA-GFKTLLLEARDRIGG 76 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSBSBT
T ss_pred cCCCEEEECCcHHHHHHHHHHHHC-CCCEEEEeCCCCCCC
Confidence 348999999999999999999998 999999999876553
No 141
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.97 E-value=0.00047 Score=79.17 Aligned_cols=35 Identities=17% Similarity=0.194 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..+||+|||||++|+++|..|++. |.+|+|+|+.+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-GVDVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCCEEEEecCC
Confidence 358999999999999999999998 99999999986
No 142
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.96 E-value=0.00046 Score=69.61 Aligned_cols=33 Identities=33% Similarity=0.643 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
||++|||||++|+.+|..|++. |.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-GLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 7999999999999999999998 99999999986
No 143
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=96.96 E-value=0.00041 Score=81.06 Aligned_cols=38 Identities=26% Similarity=0.419 Sum_probs=34.7
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
++||||||||.+|+++|.+|++. |.+|+|||+.+...+
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~GG 42 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKA-GLSVAVIEARDRVGG 42 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCC
Confidence 58999999999999999999998 999999999876553
No 144
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.95 E-value=0.00044 Score=75.37 Aligned_cols=34 Identities=38% Similarity=0.604 Sum_probs=32.0
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.||++|||||++|+.+|.+|++. |.+|+|+|+++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA-RKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 38999999999999999999998 89999999975
No 145
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.94 E-value=0.00057 Score=77.62 Aligned_cols=38 Identities=24% Similarity=0.401 Sum_probs=34.2
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccC-CCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAG-GDE 126 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG-~~~ 126 (1049)
...+||+|||||++|+++|++|++. |.+|+|+|+. +..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-GHDVTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-SCEEEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-CCcEEEEecccccc
Confidence 3468999999999999999999998 9999999998 643
No 146
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.93 E-value=0.00042 Score=82.10 Aligned_cols=34 Identities=32% Similarity=0.501 Sum_probs=32.3
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+||+||||||+||+++|.+|++. |.+|+|+|++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~-G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH-TDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-CSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 59999999999999999999998 99999999975
No 147
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.89 E-value=0.0005 Score=75.88 Aligned_cols=34 Identities=26% Similarity=0.319 Sum_probs=32.0
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
..+|+||||||++|+++|.+|++. |.+|+|+|+.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 47 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARY-MLKTLVIGET 47 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred CccCEEEECccHHHHHHHHHHHHC-CCcEEEEecc
Confidence 358999999999999999999998 9999999996
No 148
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.89 E-value=0.00045 Score=80.32 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.8
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+||||||||++|+++|..|++. |.+|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQH-DVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHT-TCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 47999999999999999999998 99999999986
No 149
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=96.89 E-value=0.00042 Score=81.78 Aligned_cols=35 Identities=34% Similarity=0.585 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..||+||||||++|+++|.+|++. |.+|+|+|++.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-G~~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-GARAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecCC
Confidence 469999999999999999999998 99999999874
No 150
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.88 E-value=0.00051 Score=76.54 Aligned_cols=35 Identities=14% Similarity=0.283 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..+|+||||||++|+++|.+|++. |.+|+|+|+.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 38 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMR-GLSFRFVDPLP 38 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 468999999999999999999998 89999999986
No 151
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.87 E-value=0.00054 Score=81.69 Aligned_cols=36 Identities=28% Similarity=0.496 Sum_probs=33.4
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..+||+||||||+||+++|.+|++. |.+|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~-G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQY-GKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeccC
Confidence 3579999999999999999999998 99999999975
No 152
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.87 E-value=0.00055 Score=80.41 Aligned_cols=35 Identities=34% Similarity=0.591 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
++||+||||||++|+++|.+|++. |.+|+|+|++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF-GKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC-CCcEEEEcCCC
Confidence 469999999999999999999997 99999999974
No 153
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.86 E-value=0.00048 Score=76.50 Aligned_cols=35 Identities=31% Similarity=0.550 Sum_probs=32.6
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..+|++|||||++|+++|.+|++. |.+|+|+|+..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 41 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRA-QLSTLILEKGM 41 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHc-CCcEEEEeCCC
Confidence 468999999999999999999998 99999999973
No 154
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.84 E-value=0.00054 Score=80.14 Aligned_cols=35 Identities=43% Similarity=0.605 Sum_probs=32.6
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..||+||||||++|+++|.+|++. |.+|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY-GQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC-CCeEEEEcCCC
Confidence 469999999999999999999997 99999999974
No 155
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.82 E-value=0.00071 Score=79.52 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=33.1
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
...||+||||||++|+++|.+|++. |.+|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 37 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQ-GAQVTLIERGT 37 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 3468999999999999999999998 89999999984
No 156
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.82 E-value=0.0024 Score=74.08 Aligned_cols=62 Identities=15% Similarity=0.182 Sum_probs=44.4
Q ss_pred HHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 292 KAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 292 ~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~-~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
..++....++.|+++++++.|+++.- ++ +.+.. +|...++.++ .||+++|. ..+.++..+|.
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~~------~~---~~~~~~~g~~~~i~~d-~vi~~~G~-~~~~~~~~~~~ 265 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIEP------DK---VIYEDLNGNTHEVPAK-FTMFMPSF-QGPEVVASAGD 265 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECS------SE---EEEECTTSCEEEEECS-EEEEECEE-ECCHHHHTTCT
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEeC------Cc---eEEEeeCCCceEeecc-eEEEeccC-CCchHHHhccc
Confidence 34566667788999999999999842 22 33433 5666789997 58998885 44577878864
No 157
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.81 E-value=0.00072 Score=81.00 Aligned_cols=35 Identities=29% Similarity=0.488 Sum_probs=32.4
Q ss_pred CCccEEEECCChhHHHHHHHHhc---CCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSE---NPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae---~~G~kVLVLEaG~ 124 (1049)
..+||||||||++|+++|..|++ . |.+|+|||+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQ-QANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCS-SCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCC-CCEEEEECCCC
Confidence 35899999999999999999999 7 99999999965
No 158
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.80 E-value=0.00073 Score=75.95 Aligned_cols=34 Identities=29% Similarity=0.238 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
+||||||||.|||.+|..|++. |.+|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~-G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL-GVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHC-CCcEEEEeccCC
Confidence 6999999999999999999998 999999999874
No 159
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=96.79 E-value=0.00055 Score=80.81 Aligned_cols=36 Identities=25% Similarity=0.426 Sum_probs=33.2
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+.+||+||||||++|+++|.+|++. |.+|+|+|+.+
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~ 39 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYK 39 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 4469999999999999999999998 99999999965
No 160
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.78 E-value=0.00062 Score=80.32 Aligned_cols=35 Identities=43% Similarity=0.701 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+||+||||||++|+++|.+|++. |.+|+|+|++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-GAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-SCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 469999999999999999999998 99999999974
No 161
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.77 E-value=0.00051 Score=80.98 Aligned_cols=35 Identities=29% Similarity=0.525 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+||+||||||++|+++|.+|++. |.+|+|+|+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~ 38 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 469999999999999999999998 99999999965
No 162
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.76 E-value=0.0028 Score=76.29 Aligned_cols=34 Identities=26% Similarity=0.414 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhcC-CCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSEN-PDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~ 124 (1049)
.||+|||||+||+++|.+|++. ++.+|+|+|+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~ 36 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGE 36 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 3899999999999999999984 478999999986
No 163
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.75 E-value=0.00075 Score=79.34 Aligned_cols=34 Identities=32% Similarity=0.554 Sum_probs=32.3
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+||+||||||++|+++|.+|++. |.+|+|+|+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-GMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 58999999999999999999998 99999999985
No 164
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.75 E-value=0.00073 Score=74.39 Aligned_cols=32 Identities=28% Similarity=0.432 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC-eEEEEccC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDW-KILLIEAG 123 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG 123 (1049)
||++|||||++|+++|..|++. |. +|+|+|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-GVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHC-CCCcEEEEcCC
Confidence 7999999999999999999998 89 99999996
No 165
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=96.74 E-value=0.00069 Score=79.63 Aligned_cols=37 Identities=24% Similarity=0.367 Sum_probs=33.6
Q ss_pred CccEEEECCChhHHHHHHHHhcCCC--CeEEEEccCCCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPD--WKILLIEAGGDEN 127 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G--~kVLVLEaG~~~~ 127 (1049)
.+||||||||.+|+++|++|++. | .+|+|||+.+...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-g~~~~v~v~E~~~~~G 42 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-FPDLNITLLEAGERLG 42 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-CTTSEEEEECSSSSSB
T ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCCCEEEEECCCCCC
Confidence 58999999999999999999998 7 9999999976543
No 166
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.74 E-value=0.00053 Score=81.55 Aligned_cols=55 Identities=9% Similarity=0.137 Sum_probs=40.6
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCc
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 353 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~ 353 (1049)
...+|...+++.|++++.+ +|++|..+ +++++++|+. .+|+ +++|+ -||.|+|+.
T Consensus 175 l~~~L~~~a~~~gv~~~~~-~v~~i~~~---~~~~~~~v~~-~~g~--~~~ad-~vV~A~G~~ 229 (511)
T 2weu_A 175 VARYLSEYAIARGVRHVVD-DVQHVGQD---ERGWISGVHT-KQHG--EISGD-LFVDCTGFR 229 (511)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEEC---TTSCEEEEEE-SSSC--EEECS-EEEECCGGG
T ss_pred HHHHHHHHHHHCCCEEEEC-eEeEEEEc---CCCCEEEEEE-CCCC--EEEcC-EEEECCCcc
Confidence 3445556666789999999 99999885 2467778876 3454 58897 599999963
No 167
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.72 E-value=0.0011 Score=75.91 Aligned_cols=38 Identities=24% Similarity=0.513 Sum_probs=34.4
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
++|++|||||.+|+++|.+|++. |.+|+|+|+.+...+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEecCCcCC
Confidence 47999999999999999999998 899999999876553
No 168
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.71 E-value=0.0008 Score=78.78 Aligned_cols=34 Identities=38% Similarity=0.574 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+||+||||||+||+++|.+|++. |.+|+|+|+.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHHC-CCeEEEEeCCC
Confidence 38999999999999999999998 99999999985
No 169
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.70 E-value=0.00089 Score=79.44 Aligned_cols=34 Identities=41% Similarity=0.694 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+||+||||||++|+++|.+|++. |.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH-NAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 48999999999999999999998 99999999985
No 170
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.68 E-value=0.00091 Score=73.58 Aligned_cols=32 Identities=31% Similarity=0.522 Sum_probs=30.1
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEcc
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEA 122 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEa 122 (1049)
+||++|||||++|+++|.+|++. |.+|+|+|+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK-GIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT-TCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeC
Confidence 48999999999999999999998 999999985
No 171
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.68 E-value=0.0011 Score=79.57 Aligned_cols=35 Identities=26% Similarity=0.462 Sum_probs=32.5
Q ss_pred CCccEEEECCChhHHHHHHHHhc---CCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSE---NPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae---~~G~kVLVLEaG~ 124 (1049)
..+||||||||++|+++|..|++ . |.+|+|||+.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQG-TADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTT-SSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC-CCcEEEEeCCC
Confidence 46899999999999999999999 7 89999999965
No 172
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.68 E-value=0.00087 Score=78.80 Aligned_cols=36 Identities=31% Similarity=0.472 Sum_probs=33.3
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..+||+||||||++|+++|.+|++. |.+|+|+|+.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~-g~~V~liE~~~ 39 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRG 39 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 3469999999999999999999998 89999999985
No 173
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.65 E-value=0.00078 Score=75.24 Aligned_cols=35 Identities=31% Similarity=0.362 Sum_probs=32.4
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
...+|++|||||++|+++|..|++. |.+|+|+|+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARA-QLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHT-TCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC
Confidence 4569999999999999999999998 9999999975
No 174
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=96.64 E-value=0.0012 Score=77.96 Aligned_cols=39 Identities=28% Similarity=0.322 Sum_probs=34.9
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCC-CeEEEEccCCCCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPD-WKILLIEAGGDENE 128 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G-~kVLVLEaG~~~~~ 128 (1049)
..+|++|||||++|+++|++|++. | .+|+|+|+.+...+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTPGG 47 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSSSG
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCCCC
Confidence 468999999999999999999998 6 89999999976553
No 175
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.64 E-value=0.00092 Score=76.25 Aligned_cols=34 Identities=41% Similarity=0.774 Sum_probs=31.3
Q ss_pred cEEEECCChhHHHHHHHHhcC-CCCeEEEEccCCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSEN-PDWKILLIEAGGD 125 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~~ 125 (1049)
||||||||++|+++|..|++. ||.+|+|+|+.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 899999999999999999984 5899999999864
No 176
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.63 E-value=0.0009 Score=78.32 Aligned_cols=34 Identities=32% Similarity=0.527 Sum_probs=32.0
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+||+||||||++|+++|.+|++. |.+|+|+|+..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 36 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKGN 36 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCC
Confidence 58999999999999999999998 99999999973
No 177
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.62 E-value=0.00074 Score=74.24 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=31.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEE-EccC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILL-IEAG 123 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLV-LEaG 123 (1049)
+.+||+|||||+||+++|.+|++. |.+|+| +|+.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~li~e~~ 37 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRG-GLKNVVMFEKG 37 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH-TCSCEEEECSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCC
Confidence 468999999999999999999998 899999 9994
No 178
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.58 E-value=0.0015 Score=78.89 Aligned_cols=42 Identities=24% Similarity=0.377 Sum_probs=37.9
Q ss_pred cCCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCCC
Q psy4102 87 LLRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENEI 129 (1049)
Q Consensus 87 ~~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~~ 129 (1049)
++.+|||||||+|..|+++|..|++. |+|||+||+.+..++.
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~-g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRS-GQRVLHVDSRSYYGGN 46 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGG
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCCcccCc
Confidence 45679999999999999999999998 9999999999877653
No 179
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.56 E-value=0.001 Score=73.40 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
.+|++|||||++|+++|.+|++. |.+|+|+|+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 37 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARA-NLQPVLITGM 37 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCCEEECCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEccC
Confidence 58999999999999999999998 9999999975
No 180
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=96.56 E-value=0.0012 Score=78.15 Aligned_cols=39 Identities=23% Similarity=0.377 Sum_probs=34.9
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
..+||||||||.+|+++|..|++. |.+|+|||+.+...+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~-g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA-GHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH-TCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCCC
Confidence 357999999999999999999998 999999999876543
No 181
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.55 E-value=0.0011 Score=78.41 Aligned_cols=33 Identities=36% Similarity=0.621 Sum_probs=30.9
Q ss_pred CCccEEEECCChhHHHHHHHHhc-CCCCeEEEEcc
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSE-NPDWKILLIEA 122 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae-~~G~kVLVLEa 122 (1049)
.+||+||||||++|+++|.+|++ . |.+|+|+|+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH-KKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc-CCEEEEEec
Confidence 35999999999999999999999 8 999999994
No 182
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.54 E-value=0.0011 Score=78.03 Aligned_cols=35 Identities=31% Similarity=0.421 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+||+||||||++|+++|.+|++. |.+|+|+|+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQL-GFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 358999999999999999999998 99999999985
No 183
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.53 E-value=0.0015 Score=76.70 Aligned_cols=39 Identities=36% Similarity=0.486 Sum_probs=33.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCC-eEEEEccCCCCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDW-KILLIEAGGDENE 128 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~~~~~ 128 (1049)
..+|++|||+|.+|+++|.+|++. |. +|+|+|+++...+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~-g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA-GITDLLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT-TCCCEEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc-CCCceEEEeCCCCCCC
Confidence 458999999999999999999998 88 8999999876543
No 184
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.53 E-value=0.00093 Score=79.13 Aligned_cols=36 Identities=25% Similarity=0.496 Sum_probs=32.3
Q ss_pred cCCCccEEEECCChhHHHHHHHHhc-CCCCeEEEEccC
Q psy4102 87 LLRAYDFIVIGAGSAGAVVANRLSE-NPDWKILLIEAG 123 (1049)
Q Consensus 87 ~~~~~DvIVVG~G~aG~~aA~rLae-~~G~kVLVLEaG 123 (1049)
|...||+||||||+||+++|.+|++ . |.+|+|+|+.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~~ 40 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVDVQ 40 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEESC
T ss_pred cccccCEEEECCChhHHHHHHHHHHhc-CCeEEEEecc
Confidence 3446999999999999999999999 8 9999999953
No 185
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.52 E-value=0.0016 Score=74.59 Aligned_cols=33 Identities=27% Similarity=0.447 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.|+|||||++|+++|..|++. |.+|+|+||.+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~-G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKH-GIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCCEEEEecCCC
Confidence 699999999999999999998 999999999763
No 186
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.50 E-value=0.0013 Score=77.23 Aligned_cols=34 Identities=32% Similarity=0.499 Sum_probs=32.0
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+||+||||||++|+++|.+|++. |.+|+|+|+..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~ 36 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-GLSTAIVEPKY 36 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 48999999999999999999998 99999999973
No 187
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.47 E-value=0.0012 Score=73.52 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=30.8
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEcc
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEA 122 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEa 122 (1049)
.+|+||||||++|+++|..|++. |.+|+|+|+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~ 39 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARA-ELKPLLFEG 39 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCeEEEEec
Confidence 58999999999999999999998 999999998
No 188
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.47 E-value=0.0012 Score=77.38 Aligned_cols=34 Identities=26% Similarity=0.405 Sum_probs=31.8
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
..||+||||||+||+++|.+|++. |.+|+|+|++
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH-TCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEccC
Confidence 358999999999999999999998 8999999994
No 189
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.43 E-value=0.0014 Score=76.81 Aligned_cols=34 Identities=44% Similarity=0.687 Sum_probs=32.3
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+||+||||||+||+++|.+|++. |.+|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~-g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL-GLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 58999999999999999999998 89999999975
No 190
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.41 E-value=0.0014 Score=80.37 Aligned_cols=34 Identities=38% Similarity=0.616 Sum_probs=32.3
Q ss_pred CccEEEECCChhHHHHHHHHhc-----CCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSE-----NPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae-----~~G~kVLVLEaG~ 124 (1049)
++||||||||++|+++|..|++ . |.+|+||||.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~ 46 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCC
Confidence 5899999999999999999999 7 99999999975
No 191
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.37 E-value=0.002 Score=80.04 Aligned_cols=40 Identities=30% Similarity=0.411 Sum_probs=35.4
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
...+||||||||.+|+++|..|++. |.+|+|||+.+...+
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNF-GIKVTVLEAKDRIGG 373 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEecccceec
Confidence 3468999999999999999999998 999999999876543
No 192
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.28 E-value=0.0026 Score=72.50 Aligned_cols=63 Identities=13% Similarity=0.162 Sum_probs=42.7
Q ss_pred HchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 293 AFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 293 ~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
..+....++.|++|++++.|++|..+ ++. ..|.+ .+|+ ++.++ .||+|+|......+|..+|+
T Consensus 191 ~~l~~~l~~~gv~i~~~~~v~~i~~~----~~~-~~v~~-~~g~--~i~~d-~vv~a~G~~p~~~l~~~~g~ 253 (384)
T 2v3a_A 191 KAVQAGLEGLGVRFHLGPVLASLKKA----GEG-LEAHL-SDGE--VIPCD-LVVSAVGLRPRTELAFAAGL 253 (384)
T ss_dssp HHHHHHHHTTTCEEEESCCEEEEEEE----TTE-EEEEE-TTSC--EEEES-EEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHHHcCCEEEeCCEEEEEEec----CCE-EEEEE-CCCC--EEECC-EEEECcCCCcCHHHHHHCCC
Confidence 34555566788999999999998765 222 34443 3453 57787 49999997665567777776
No 193
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.28 E-value=0.0021 Score=78.00 Aligned_cols=35 Identities=29% Similarity=0.428 Sum_probs=32.4
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
...||+||||||+||+++|.+|++. |.+|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~-g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY-GAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhC-CCeEEEEecc
Confidence 3469999999999999999999998 9999999985
No 194
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.24 E-value=0.002 Score=76.39 Aligned_cols=35 Identities=23% Similarity=0.460 Sum_probs=32.0
Q ss_pred CccEEEECCChhHHHHHHHHhcC-C-CCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSEN-P-DWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~-~-G~kVLVLEaG~ 124 (1049)
+||+||||||++|+++|.+|++. + |.+|+|||+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999984 3 89999999986
No 195
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.22 E-value=0.0027 Score=74.20 Aligned_cols=38 Identities=24% Similarity=0.336 Sum_probs=34.3
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDEN 127 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~ 127 (1049)
..+||+|||||+||+++|..|++. |.+|+|+|+.+...
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-G~~V~v~e~~~~~G 158 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-GYEVHVYDRYDRMG 158 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeccCCCC
Confidence 468999999999999999999998 89999999987543
No 196
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.18 E-value=0.0032 Score=73.03 Aligned_cols=63 Identities=22% Similarity=0.322 Sum_probs=47.6
Q ss_pred chHHhhhcCCcEEecCceEEEEEe--ccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 294 FLRPIRLRKNLHIAMETQALRLLF--DKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 294 ~L~~~~~~~nl~I~~~t~V~~Il~--d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
++....++.|++|++++.|++|.. + ++++.+|.+ .+|+ ++.++ .||+|+|......+|..+|+
T Consensus 196 ~l~~~l~~~GV~i~~~~~v~~i~~~~~----~~~v~~v~~-~~G~--~i~~D-~Vv~a~G~~p~~~l~~~~gl 260 (431)
T 1q1r_A 196 FYEHLHREAGVDIRTGTQVCGFEMSTD----QQKVTAVLC-EDGT--RLPAD-LVIAGIGLIPNCELASAAGL 260 (431)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEECTT----TCCEEEEEE-TTSC--EEECS-EEEECCCEEECCHHHHHTTC
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEeccC----CCcEEEEEe-CCCC--EEEcC-EEEECCCCCcCcchhhccCC
Confidence 455556778999999999999976 3 356777766 3554 57887 59999997766668888876
No 197
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.15 E-value=0.0028 Score=75.56 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=31.6
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEcc
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEA 122 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEa 122 (1049)
...||++|||||+||+++|.+|++. |.+|+|+|+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~-G~~v~lie~ 243 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK-GIRTGLMGE 243 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC-CCeEEEEEC
Confidence 3479999999999999999999998 999999986
No 198
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.01 E-value=0.0033 Score=73.47 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=31.9
Q ss_pred ccEEEECCChhHHHHHHHHhcC-CCCeEEEEccCCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSEN-PDWKILLIEAGGD 125 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~~ 125 (1049)
+|+||||||++|+++|.+|++. +|.+|+|+|+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 6999999999999999999984 5899999999874
No 199
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.99 E-value=0.004 Score=70.64 Aligned_cols=32 Identities=22% Similarity=0.470 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-|+||||||+||+++|.+|++. | +|+|+|+.+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~-g-~V~lie~~~ 40 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQT-Y-EVTVIDKEP 40 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhhc-C-CEEEEECCC
Confidence 5999999999999999999998 7 999999986
No 200
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.90 E-value=0.0053 Score=71.65 Aligned_cols=37 Identities=27% Similarity=0.347 Sum_probs=32.9
Q ss_pred ccEEEECCChhHHHHHHHHhc-CCCCeEEEEccCCCCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSE-NPDWKILLIEAGGDEN 127 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae-~~G~kVLVLEaG~~~~ 127 (1049)
.|+||||||+||+++|.+|++ .+|.+|+|+|+++...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 599999999999999999998 3579999999998543
No 201
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.86 E-value=0.0067 Score=75.31 Aligned_cols=38 Identities=21% Similarity=0.419 Sum_probs=34.4
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDEN 127 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~ 127 (1049)
..+||+|||||+||+.+|..|++. |.+|+|+|+.+...
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~-G~~Vtlie~~~~~G 425 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMES-GYTVHLTDTAEKIG 425 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCcC
Confidence 458999999999999999999998 99999999987543
No 202
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.82 E-value=0.0063 Score=74.85 Aligned_cols=38 Identities=24% Similarity=0.397 Sum_probs=34.3
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDEN 127 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~ 127 (1049)
..+|+||||||+||+.+|..|++. |.+|+|+|+.+...
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~g 409 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAAR-GHQVTLFDAHSEIG 409 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCC
Confidence 458999999999999999999998 99999999987543
No 203
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.81 E-value=0.0037 Score=73.84 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHhcCCC---CeEEEEccCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPD---WKILLIEAGGD 125 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G---~kVLVLEaG~~ 125 (1049)
.+|+||||||++|+++|.+|++. | .+|+|+|+.+.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-YGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-HGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCCeEEEEECCCC
Confidence 48999999999999999999997 5 99999999864
No 204
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.81 E-value=0.0051 Score=72.73 Aligned_cols=38 Identities=21% Similarity=0.483 Sum_probs=32.9
Q ss_pred CCCccEEEECCChhHHHHHHHHhc-CCCCeEEEEccCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSE-NPDWKILLIEAGGD 125 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae-~~G~kVLVLEaG~~ 125 (1049)
...+|+||||||+||+.+|..|.+ .++.+|+|||+.+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~ 47 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPE 47 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 456999999999999999988876 34789999999864
No 205
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.77 E-value=0.0059 Score=74.93 Aligned_cols=40 Identities=25% Similarity=0.377 Sum_probs=35.5
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
...+||+|||+|++|+++|..|++. |.+|+|+|+.+...+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC-CCeEEEEecCCCCCC
Confidence 3468999999999999999999998 999999999876543
No 206
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.71 E-value=0.0045 Score=79.22 Aligned_cols=62 Identities=10% Similarity=0.028 Sum_probs=47.3
Q ss_pred hhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe------CCeEEEEEcCeEEEEcCCCcchHHHHHhCC
Q psy4102 298 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR------DGRKHIIRAKKEIISSAGAINSPQLLMVSG 363 (1049)
Q Consensus 298 ~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~------~g~~~~v~A~k~VILAAGa~~Tp~LLl~SG 363 (1049)
.+++.|++|++++.|++|.-+ +++++.+|.+.+ +|+..++.++ .||+|+|-.-+..++...|
T Consensus 325 ~l~~~GV~v~~~~~v~~i~~~---~~~~v~~v~~~~~~~~~~~G~~~~i~~D-~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 325 QAVADGVQVISGSVVVDTEAD---ENGELSAIVVAELDEARELGGTQRFEAD-VLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHHHTTCCEEETEEEEEEEEC---TTSCEEEEEEEEECTTCCEEEEEEEECS-EEEEECCEEECCHHHHHTT
T ss_pred HHHhCCeEEEeCCEeEEEecc---CCCCEEEEEEEeccccCCCCceEEEEcC-EEEECCCcCcChHHHHhCC
Confidence 346789999999999999763 135788898875 3555689998 5999999776667776654
No 207
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.69 E-value=0.0053 Score=72.26 Aligned_cols=37 Identities=22% Similarity=0.448 Sum_probs=32.4
Q ss_pred CccEEEECCChhHHHHHHHHhcC-CCCeEEEEccCCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSEN-PDWKILLIEAGGDE 126 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~~~ 126 (1049)
.+|+||||||++|+++|.+|++. +|.+|+|+|+.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 36999999999999999999984 48899999998754
No 208
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.69 E-value=0.0047 Score=73.01 Aligned_cols=36 Identities=33% Similarity=0.390 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDE 126 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~ 126 (1049)
..+||||||+|++|+++|.+|++. .+|+|+|+++..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~--~~V~vie~~~~~ 142 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY--LTVALIEERGWL 142 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT--CCEEEECTTSSS
T ss_pred ccCCEEEECccHHHHHHHHHHHhc--CCEEEEeCCCCC
Confidence 358999999999999999999997 899999998754
No 209
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.67 E-value=0.0054 Score=70.49 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhc---CCCCeEEEEccCCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSE---NPDWKILLIEAGGD 125 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae---~~G~kVLVLEaG~~ 125 (1049)
|+||||||++|+.+|.+|++ . |.+|+|||+.+.
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~-g~~V~vie~~~~ 38 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGS-KADVKVINKSRF 38 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGG-GSEEEEEESSSE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCC-CCeEEEEeCCCC
Confidence 79999999999999999998 6 899999999873
No 210
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=95.67 E-value=0.0073 Score=70.39 Aligned_cols=37 Identities=30% Similarity=0.567 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHhcC-CCCeEEEEccCCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSEN-PDWKILLIEAGGDE 126 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~~~ 126 (1049)
.+|+||||||++|+++|.+|++. ++.+|+|+|+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 47999999999999999999984 47899999999754
No 211
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.63 E-value=0.0059 Score=71.12 Aligned_cols=35 Identities=29% Similarity=0.374 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHhcC-CCCeEEEEccCCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSEN-PDWKILLIEAGGD 125 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~~ 125 (1049)
.|+||||||+||+++|.+|++. +|.+|+|+|+.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCc
Confidence 4899999999999999999984 4799999999874
No 212
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.61 E-value=0.0069 Score=71.11 Aligned_cols=64 Identities=23% Similarity=0.250 Sum_probs=46.8
Q ss_pred HHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 292 KAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 292 ~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
...+....++.|++|++++.|++|..+ +++++ |.+ .+|+ ++.++ .||+|+|......++..+|+
T Consensus 205 ~~~l~~~l~~~GV~i~~~~~v~~i~~~----~~~v~-v~~-~~g~--~i~aD-~Vv~a~G~~p~~~l~~~~gl 268 (472)
T 3iwa_A 205 SQMLRHDLEKNDVVVHTGEKVVRLEGE----NGKVA-RVI-TDKR--TLDAD-LVILAAGVSPNTQLARDAGL 268 (472)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEES----SSBEE-EEE-ESSC--EEECS-EEEECSCEEECCHHHHHHTC
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEcc----CCeEE-EEE-eCCC--EEEcC-EEEECCCCCcCHHHHHhCCc
Confidence 344556667889999999999999775 34555 544 4555 58897 59999998766567777676
No 213
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.60 E-value=0.0064 Score=69.94 Aligned_cols=36 Identities=19% Similarity=0.333 Sum_probs=32.2
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCC--eEEEEccCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDW--KILLIEAGGD 125 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~--kVLVLEaG~~ 125 (1049)
..+|+||||||++|+.+|.+|++. |. +|+|+|+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQA-GYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHH-TCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-CCCCeEEEEECCCC
Confidence 458999999999999999999997 65 6999999874
No 214
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.58 E-value=0.0068 Score=70.38 Aligned_cols=35 Identities=26% Similarity=0.473 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHhc---CCCCeEEEEccCCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSE---NPDWKILLIEAGGD 125 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae---~~G~kVLVLEaG~~ 125 (1049)
..|+||||||.+|+.+|.+|++ . |.+|+|||+.+.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~-g~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGS-GHEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGG-GSEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCC-cCEEEEEeCCCC
Confidence 4699999999999999999998 5 899999999874
No 215
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.54 E-value=0.0091 Score=74.82 Aligned_cols=40 Identities=25% Similarity=0.377 Sum_probs=35.5
Q ss_pred CCCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCCCCC
Q psy4102 88 LRAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGDENE 128 (1049)
Q Consensus 88 ~~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~~~~ 128 (1049)
...+||+|||+|++|+++|.+|++. |.+|+|+|+.+...+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~-g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEecCcCCC
Confidence 3457999999999999999999998 999999999876553
No 216
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=95.53 E-value=0.037 Score=60.88 Aligned_cols=59 Identities=22% Similarity=0.384 Sum_probs=45.4
Q ss_pred cCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 301 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 301 ~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
+.|++|+++++|++|..+ ++++.+|.+.. +|+..++.++ .||+|+|...+..+|..+|+
T Consensus 202 ~~gv~i~~~~~v~~i~~~----~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGD----GKKVTGVKYKDRTTGEEKLIETD-GVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HTTCCEECSEEEEEEEES----SSSEEEEEEEETTTCCEEEECCS-EEEECCCEEECCGGGTTSCC
T ss_pred cCCcEEEcCCeEEEEecC----CceEEEEEEEEcCCCceEEEecC-EEEEeeCCccChHHHhhccc
Confidence 458899999999999765 35688998874 6766678997 69999997666666665554
No 217
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=95.49 E-value=0.057 Score=59.22 Aligned_cols=56 Identities=7% Similarity=0.092 Sum_probs=42.3
Q ss_pred hhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--C-CeEEEEEcCeEEEEcCCCcchHHHH
Q psy4102 299 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--D-GRKHIIRAKKEIISSAGAINSPQLL 359 (1049)
Q Consensus 299 ~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~-g~~~~v~A~k~VILAAGa~~Tp~LL 359 (1049)
+++.|++|++++.|++|..+ ++++.+|.+.. + |+..++.++ .||+|+|.-..+.+|
T Consensus 194 l~~~gv~i~~~~~v~~i~~~----~~~v~~v~~~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 194 VENGNIILHTNRTLEEVTGD----QMGVTGVRLRDTQNSDNIESLDVA-GLFVAIGHSPNTAIF 252 (320)
T ss_dssp HHTSSEEEECSCEEEEEEEC----SSSEEEEEEECCTTCCCCEEEECS-EEEECSCEEESCGGG
T ss_pred cccCCeEEEcCceeEEEEcC----CCceEEEEEEeccCCCceEEEEcC-EEEEEeCCCCChHHh
Confidence 34678999999999999865 35788898864 2 555678997 599999965554444
No 218
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=95.47 E-value=0.065 Score=60.05 Aligned_cols=60 Identities=13% Similarity=0.139 Sum_probs=44.6
Q ss_pred hcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 300 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 300 ~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~-~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
++.|++|++++.|++|..+ ++++.+|.+.. +|+..++.++ .||+|+|.-....+|..+|+
T Consensus 213 ~~~gv~i~~~~~v~~i~~~----~~~v~~v~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~~ 273 (360)
T 3ab1_A 213 ANGTIDVYLETEVASIEES----NGVLTRVHLRSSDGSKWTVEAD-RLLILIGFKSNLGPLARWDL 273 (360)
T ss_dssp HHTSEEEESSEEEEEEEEE----TTEEEEEEEEETTCCEEEEECS-EEEECCCBCCSCGGGGGSSC
T ss_pred hcCceEEEcCcCHHHhccC----CCceEEEEEEecCCCeEEEeCC-EEEECCCCCCCHHHHHhhcc
Confidence 4568999999999999876 46788888753 6655678997 69999995544445555544
No 219
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.42 E-value=0.061 Score=59.28 Aligned_cols=54 Identities=13% Similarity=0.144 Sum_probs=42.7
Q ss_pred cCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHH
Q psy4102 301 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLL 359 (1049)
Q Consensus 301 ~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LL 359 (1049)
+.|++|++++.|++|..+ ++++++|.+.+ +|+..++.++ .||+|+|...++.++
T Consensus 221 ~~gv~i~~~~~v~~i~~~----~~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 221 NEKIEILYNTVALEAKGD----GKLLNALRIKNTKKNEETDLPVS-GLFYAIGHTPATKIV 276 (338)
T ss_dssp CTTEEEECSEEEEEEEES----SSSEEEEEEEETTTTEEEEEECS-EEEECSCEEECCGGG
T ss_pred cCCeEEeecceeEEEEcc----cCcEEEEEEEECCCCceEEEEeC-EEEEEeCCCCChhHh
Confidence 458999999999999876 46788998876 5666789997 699999976555544
No 220
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.39 E-value=0.071 Score=60.50 Aligned_cols=33 Identities=24% Similarity=0.435 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 178 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSG-GYQLDVVAPCE 178 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCc
Confidence 4799999999999999999998 99999999986
No 221
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.37 E-value=0.046 Score=63.87 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 202 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRL-GAEVTLIEYMP 202 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEEcCC
Confidence 3699999999999999999998 89999999986
No 222
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=95.36 E-value=0.11 Score=56.58 Aligned_cols=59 Identities=10% Similarity=0.143 Sum_probs=47.2
Q ss_pred hcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 300 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 300 ~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
++.|+++++++.|++|..+ +++.+|.+.+ +|+..++.++ .||+|+|.-.+..+|..+|+
T Consensus 201 ~~~gv~~~~~~~v~~i~~~-----~~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 201 KKPNVEFVLNSVVKEIKGD-----KVVKQVVVENLKTGEIKELNVN-GVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp TCTTEEEECSEEEEEEEES-----SSEEEEEEEETTTCCEEEEECS-EEEECCCEECCHHHHHHTTC
T ss_pred hCCCcEEEeCCEEEEEecc-----CceeEEEEEECCCCceEEEEcC-EEEEEECCCCChhHHhhcCe
Confidence 3458999999999999755 4677888865 4666678997 69999998777788888876
No 223
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.25 E-value=0.037 Score=64.49 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 203 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANF-GTKVTILEGAG 203 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCC
Confidence 4799999999999999999998 89999999985
No 224
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=95.21 E-value=0.085 Score=57.56 Aligned_cols=57 Identities=9% Similarity=0.016 Sum_probs=43.5
Q ss_pred cCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHHHhC
Q psy4102 301 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVS 362 (1049)
Q Consensus 301 ~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LLl~S 362 (1049)
+.|++|++++.|++|..+ ++++.+|.+.. +|+..++.++ .||+|+|......+|..+
T Consensus 191 ~~gv~v~~~~~v~~i~~~----~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKGD----ASGVSSLSIKNTATNEKRELVVP-GFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp CTTEEEETTEEEEEEEEE----TTEEEEEEEEETTTCCEEEEECS-EEEECSCEEECCGGGBCT
T ss_pred CCCeEEEeCCEEEEEECC----CCcEeEEEEEecCCCceEEEecC-EEEEEecCccChhhhhcc
Confidence 468999999999999765 35777888874 6776788997 699999976555555444
No 225
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.18 E-value=0.035 Score=65.09 Aligned_cols=32 Identities=22% Similarity=0.301 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 185 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 216 (478)
T 1v59_A 185 RLTIIGGGIIGLEMGSVYSRL-GSKVTVVEFQP 216 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCC
Confidence 699999999999999999998 89999999986
No 226
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.08 E-value=0.011 Score=69.00 Aligned_cols=36 Identities=22% Similarity=0.262 Sum_probs=32.1
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCC--CeEEEEccCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPD--WKILLIEAGGD 125 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G--~kVLVLEaG~~ 125 (1049)
..+|++|||+|++|+.+|..|++. | .+|+|+|+.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKH-HSRAHVDIYEKQLV 42 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH-CSSCEEEEECSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhc-CCCCCEEEEeCCCc
Confidence 358999999999999999999997 5 99999999863
No 227
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.03 E-value=0.014 Score=75.20 Aligned_cols=62 Identities=15% Similarity=0.249 Sum_probs=45.3
Q ss_pred hhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe-----C-------CeEEEEEcCeEEEEcCCCc-chHHHHHh-CC
Q psy4102 298 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-----D-------GRKHIIRAKKEIISSAGAI-NSPQLLMV-SG 363 (1049)
Q Consensus 298 ~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~-----~-------g~~~~v~A~k~VILAAGa~-~Tp~LLl~-SG 363 (1049)
.+++.|+++++++.+++|..+ ++++++|++.+ + |+..++.++ .||+|.|.. .++.|+.. +|
T Consensus 379 ~~~~~Gv~~~~~~~~~~i~~~----~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD-~Vi~A~G~~~~~~~l~~~~~g 453 (1025)
T 1gte_A 379 LAKEEKCEFLPFLSPRKVIVK----GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKAD-VVISAFGSVLRDPKVKEALSP 453 (1025)
T ss_dssp HHHHTTCEEECSEEEEEEEEE----TTEEEEEEEEEEEECTTSCEEEEEEEEEEEECS-EEEECSCEECCCHHHHHHTTT
T ss_pred HHHHcCCEEEeCCCceEEEcc----CCeEEEEEEEEeEEcCCCCcccCCCceEEEECC-EEEECCCCCCCchhhhhcccC
Confidence 345679999999999999765 46888887642 2 334578997 599999974 35666654 56
Q ss_pred C
Q psy4102 364 I 364 (1049)
Q Consensus 364 I 364 (1049)
+
T Consensus 454 l 454 (1025)
T 1gte_A 454 I 454 (1025)
T ss_dssp S
T ss_pred c
Confidence 6
No 228
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.02 E-value=0.1 Score=60.19 Aligned_cols=32 Identities=25% Similarity=0.466 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+.+
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~ 182 (431)
T 1q1r_A 151 RLVVIGGGYIGLEVAATAIKA-NMHVTLLDTAA 182 (431)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCC
Confidence 699999999999999999998 89999999976
No 229
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.01 E-value=0.058 Score=61.91 Aligned_cols=57 Identities=18% Similarity=0.202 Sum_probs=44.1
Q ss_pred hhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 299 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 299 ~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
.++.|++|++++.|++|..+ +++.+|++ .+|+ ++.++ .||+|+|..-...+|..+|+
T Consensus 195 l~~~GV~i~~~~~v~~i~~~-----~~~~~v~~-~dg~--~i~aD-~Vv~a~G~~p~~~l~~~~gl 251 (410)
T 3ef6_A 195 LTELGVQVELGTGVVGFSGE-----GQLEQVMA-SDGR--SFVAD-SALICVGAEPADQLARQAGL 251 (410)
T ss_dssp HHHHTCEEECSCCEEEEECS-----SSCCEEEE-TTSC--EEECS-EEEECSCEEECCHHHHHTTC
T ss_pred HHHCCCEEEeCCEEEEEecc-----CcEEEEEE-CCCC--EEEcC-EEEEeeCCeecHHHHHhCCC
Confidence 34568999999999998754 35667766 3554 57897 59999998877778888887
No 230
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.97 E-value=0.1 Score=56.86 Aligned_cols=54 Identities=28% Similarity=0.344 Sum_probs=41.8
Q ss_pred CCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHHH
Q psy4102 302 KNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLM 360 (1049)
Q Consensus 302 ~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LLl 360 (1049)
.|++|++++.|++|.-+ ++++.+|++.+ +|+..++.++ .||+|+|...++.+|.
T Consensus 193 ~gv~v~~~~~v~~i~~~----~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~ 248 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGD----GSKVVGLEYRDRVSGDIHNIELA-GIFVQIGLLPNTNWLE 248 (310)
T ss_dssp TTEEEESSEEEEEEEES----SSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGT
T ss_pred CCeEEecCCceEEEEcC----CCcEEEEEEEECCCCcEEEEEcC-EEEEeeCCccCchHHh
Confidence 58999999999999755 46788998875 4666788997 5999999655545543
No 231
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.94 E-value=0.038 Score=64.94 Aligned_cols=33 Identities=30% Similarity=0.440 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 219 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVEL-GKKVRMIERND 219 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-TCEEEEECCGG
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCC
Confidence 4799999999999999999998 89999999975
No 232
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=94.79 E-value=0.2 Score=55.02 Aligned_cols=54 Identities=7% Similarity=0.166 Sum_probs=41.3
Q ss_pred cCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHHH
Q psy4102 301 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLM 360 (1049)
Q Consensus 301 ~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LLl 360 (1049)
+.|++|++++.|++|..+ +++.+|.+.. +|+..++.++ .||+|+|.-.+..+|.
T Consensus 200 ~~gv~i~~~~~v~~i~~~-----~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~ 255 (325)
T 2q7v_A 200 NPKMKFIWDTAVEEIQGA-----DSVSGVKLRNLKTGEVSELATD-GVFIFIGHVPNTAFVK 255 (325)
T ss_dssp CTTEEEECSEEEEEEEES-----SSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGT
T ss_pred cCCceEecCCceEEEccC-----CcEEEEEEEECCCCcEEEEEcC-EEEEccCCCCChHHHh
Confidence 458999999999999754 4678898874 6766788997 6999998654444443
No 233
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.78 E-value=0.13 Score=56.62 Aligned_cols=61 Identities=10% Similarity=0.178 Sum_probs=43.8
Q ss_pred hcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 300 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 300 ~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
++.|++|++++.|++|..++ +..++.+|.+.. +|+..++.++ .||+|+|.-.+..+|. +|+
T Consensus 206 ~~~gv~i~~~~~v~~i~~~~--~~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~~-~~l 268 (333)
T 1vdc_A 206 SNPKIDVIWNSSVVEAYGDG--ERDVLGGLKVKNVVTGDVSDLKVS-GLFFAIGHEPATKFLD-GGV 268 (333)
T ss_dssp TCTTEEEECSEEEEEEEESS--SSSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGT-TSS
T ss_pred hCCCeeEecCCceEEEeCCC--CccceeeEEEEecCCCceEEEecC-EEEEEeCCccchHHhh-ccc
Confidence 35689999999999997651 011788888875 5666788997 5999999765555443 443
No 234
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=94.72 E-value=0.16 Score=55.90 Aligned_cols=59 Identities=14% Similarity=0.102 Sum_probs=43.5
Q ss_pred hcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 300 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 300 ~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
++.|+++++++.|++|.-+ +++.+|.+.. +|+..++.++ .||+|+|.-....+|..+|+
T Consensus 202 ~~~gv~v~~~~~v~~i~~~-----~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~~ 262 (335)
T 2zbw_A 202 EEGRLEVLTPYELRRVEGD-----ERVRWAVVFHNQTQEELALEVD-AVLILAGYITKLGPLANWGL 262 (335)
T ss_dssp HTTSSEEETTEEEEEEEES-----SSEEEEEEEETTTCCEEEEECS-EEEECCCEEEECGGGGGSCC
T ss_pred ccCCeEEecCCcceeEccC-----CCeeEEEEEECCCCceEEEecC-EEEEeecCCCCchHhhhcce
Confidence 4568999999999999754 4677888764 5655678997 59999996554455655554
No 235
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.60 E-value=0.02 Score=65.86 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCe--EEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWK--ILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~k--VLVLEaG~ 124 (1049)
.|+||||||+||+++|.+|++. |.+ |+|+|+.+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-g~~~~V~li~~~~ 37 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-GFEGRISLIGDEP 37 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEEECSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-CcCCeEEEEECCC
Confidence 4899999999999999999998 766 99999986
No 236
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.48 E-value=0.045 Score=64.26 Aligned_cols=60 Identities=13% Similarity=0.217 Sum_probs=39.6
Q ss_pred hhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHH-HHhCCC
Q psy4102 299 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL-LMVSGI 364 (1049)
Q Consensus 299 ~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~L-Ll~SGI 364 (1049)
.++.|++|++++.|++|..+ ++++++.|.+ .+|+ .++.++ .||+|+|.-.+..| |..+|+
T Consensus 236 l~~~Gv~i~~~~~v~~i~~~---~~~~~~~v~~-~~G~-~~i~~D-~vv~a~G~~p~~~l~l~~~gl 296 (479)
T 2hqm_A 236 YVKEGINVHKLSKIVKVEKN---VETDKLKIHM-NDSK-SIDDVD-ELIWTIGRKSHLGMGSENVGI 296 (479)
T ss_dssp HHHHTCEEECSCCEEEEEEC---C-CCCEEEEE-TTSC-EEEEES-EEEECSCEEECCCSSGGGGTC
T ss_pred HHhCCeEEEeCCEEEEEEEc---CCCcEEEEEE-CCCc-EEEEcC-EEEECCCCCCccccChhhcCc
Confidence 34568999999999999765 1233445554 3553 368897 59999996544444 455555
No 237
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=94.46 E-value=0.058 Score=62.98 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 173 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 204 (464)
T 2a8x_A 173 SIIIAGAGAIGMEFGYVLKNY-GVDVTIVEFLP 204 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCcHHHHHHHHHHHHc-CCeEEEEEcCC
Confidence 689999999999999999998 89999999885
No 238
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=94.42 E-value=0.016 Score=67.61 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.4
Q ss_pred CccEEEECCChhHHHHHHHHhc-C-C----CCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSE-N-P----DWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae-~-~----G~kVLVLEaG~ 124 (1049)
.+|++|||||+||+.+|..|++ . + +.+|+|+|+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~ 43 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 43 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCC
Confidence 4799999999999999999988 4 2 78999999986
No 239
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=94.32 E-value=0.6 Score=54.11 Aligned_cols=35 Identities=20% Similarity=0.316 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhcC-CCCeEEEEccCCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSEN-PDWKILLIEAGGD 125 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~~ 125 (1049)
-.++|||+|..|+-+|..|++. ++.+|.++++.+.
T Consensus 228 ~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 228 MKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 4799999999999999999985 5789999999873
No 240
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=94.30 E-value=0.016 Score=70.84 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=32.7
Q ss_pred CccEEEECCChhHHHHHHHHhcCCC--------CeEEEEccCC-CC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPD--------WKILLIEAGG-DE 126 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G--------~kVLVLEaG~-~~ 126 (1049)
..+|+|||||++|+++|++|++. | .+|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~-g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL-AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH-HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CcccccCCCceEEEEeccCccc
Confidence 47999999999999999999987 6 8999999987 54
No 241
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.30 E-value=0.097 Score=61.14 Aligned_cols=59 Identities=12% Similarity=0.163 Sum_probs=39.3
Q ss_pred hcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEcCeEEEEcCCCcchHHH--HHhCCC
Q psy4102 300 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQL--LMVSGI 364 (1049)
Q Consensus 300 ~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~-~g~~~~v~A~k~VILAAGa~~Tp~L--Ll~SGI 364 (1049)
++.|++|+++++|++|..+ ++. +.|.+.. +|+..++.++ .||+|+|.--+..+ |...|+
T Consensus 227 ~~~gv~i~~~~~v~~i~~~----~~~-~~v~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~l~l~~~gl 288 (468)
T 2qae_A 227 KNEKMKFMTSTKVVGGTNN----GDS-VSLEVEGKNGKRETVTCE-ALLVSVGRRPFTGGLGLDKINV 288 (468)
T ss_dssp HHTCCEEECSCEEEEEEEC----SSS-EEEEEECC---EEEEEES-EEEECSCEEECCTTSCHHHHTC
T ss_pred hcCCcEEEeCCEEEEEEEc----CCe-EEEEEEcCCCceEEEECC-EEEECCCcccCCCCCCchhcCC
Confidence 5678999999999999765 222 3444432 4544578997 59999997665555 555565
No 242
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.16 E-value=0.08 Score=61.96 Aligned_cols=32 Identities=25% Similarity=0.350 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 180 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 211 (474)
T 1zmd_A 180 KMVVIGAGVIGVELGSVWQRL-GADVTAVEFLG 211 (474)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCEEEEEeccC
Confidence 699999999999999999998 89999999886
No 243
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=94.16 E-value=0.031 Score=63.77 Aligned_cols=34 Identities=29% Similarity=0.560 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhcC-CCCeEEEEccCCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSEN-PDWKILLIEAGGD 125 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~~ 125 (1049)
-|||||||+||+++|.+|++. ++.+|+|||+.+.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 389999999999999999874 3579999999764
No 244
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=94.13 E-value=0.28 Score=53.24 Aligned_cols=56 Identities=13% Similarity=0.157 Sum_probs=43.2
Q ss_pred hcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEcCeEEEEcCCCcchHHHHH
Q psy4102 300 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQLLM 360 (1049)
Q Consensus 300 ~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~-~g~~~~v~A~k~VILAAGa~~Tp~LLl 360 (1049)
++.|+++++++.|++|..+ ++++.+|.+.. +|+..++.++ .||+|+|....+.++.
T Consensus 194 ~~~gv~~~~~~~v~~i~~~----~~~~~~v~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~ 250 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGD----KMGVAGVKVKLKDGSIRDLNVP-GIFTFVGLNVRNEILK 250 (315)
T ss_dssp HCTTEEEECSCEEEEEEEE----TTEEEEEEEECTTSCEEEECCS-CEEECSCEEECCGGGB
T ss_pred hcCCeEEEeCcEEEEEEcC----CCcEEEEEEEcCCCCeEEeecC-eEEEEEcCCCCchhhh
Confidence 4568999999999999876 46888998863 6766788997 5999999655544443
No 245
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=94.09 E-value=0.13 Score=60.66 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 176 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 207 (492)
T 3ic9_A 176 SVAVFGPGVIGLELGQALSRL-GVIVKVFGRSG 207 (492)
T ss_dssp EEEEESSCHHHHHHHHHHHHT-TCEEEEECCTT
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCeEEEEEECC
Confidence 689999999999999999998 88999999876
No 246
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=94.09 E-value=0.084 Score=61.37 Aligned_cols=32 Identities=28% Similarity=0.529 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 182 (452)
T 2cdu_A 151 TITIIGSGYIGAELAEAYSNQ-NYNVNLIDGHE 182 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred eEEEECcCHHHHHHHHHHHhc-CCEEEEEEcCC
Confidence 699999999999999999998 89999999986
No 247
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.82 E-value=0.029 Score=65.11 Aligned_cols=33 Identities=27% Similarity=0.492 Sum_probs=28.9
Q ss_pred EEEECCChhHHHHHHHHhcC-CCCeEEEEccCCC
Q psy4102 93 FIVIGAGSAGAVVANRLSEN-PDWKILLIEAGGD 125 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~~ 125 (1049)
+||||||+||+++|.+|++. +..+|+|+|+.+.
T Consensus 3 VvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~ 36 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRRLDKESDIIIFEKDRD 36 (437)
T ss_dssp EEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSC
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCC
Confidence 89999999999999999985 2368999999864
No 248
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=93.59 E-value=0.13 Score=60.04 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.++|||+|..|+-+|..|++..|.+|.++|+++
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~ 193 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD 193 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC
Confidence 3799999999999999999885368999999986
No 249
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.53 E-value=0.12 Score=60.83 Aligned_cols=32 Identities=13% Similarity=0.250 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 178 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 209 (500)
T 1onf_A 178 KIGIVGSGYIAVELINVIKRL-GIDSYIFARGN 209 (500)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSS
T ss_pred eEEEECChHHHHHHHHHHHHc-CCeEEEEecCC
Confidence 689999999999999999988 88999999875
No 250
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=93.47 E-value=0.2 Score=59.34 Aligned_cols=53 Identities=26% Similarity=0.360 Sum_probs=41.7
Q ss_pred CCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHH
Q psy4102 302 KNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLL 359 (1049)
Q Consensus 302 ~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LL 359 (1049)
+|++|++++.|++|.-+ ++++++|.+.+ +|+..++.++ .||+|+|...+..+|
T Consensus 404 ~gV~v~~~~~v~~i~~~----~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGD----GSKVVGLEYRDRVSGDIHSVALA-GIFVQIGLLPNTHWL 458 (521)
T ss_dssp TTEEEECSEEEEEEEEC----SSSEEEEEEEETTTCCEEEEECS-EEEECCCEEESCGGG
T ss_pred CCcEEEeCCEEEEEEcC----CCcEEEEEEEeCCCCceEEEEcC-EEEECcCCCCCchHH
Confidence 58999999999999765 46888999875 4666789997 599999966444444
No 251
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=93.45 E-value=0.044 Score=64.74 Aligned_cols=36 Identities=8% Similarity=0.298 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
+...|||||||.||+.+|.+|++. +.+|+|||+.+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~-~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTK-KYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTT-TCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhC-CCcEEEECCCCC
Confidence 345799999999999999999887 899999999763
No 252
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=93.43 E-value=0.092 Score=61.62 Aligned_cols=32 Identities=19% Similarity=0.308 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~-G~~Vtlv~~~~ 218 (482)
T 1ojt_A 187 KLLIIGGGIIGLEMGTVYSTL-GSRLDVVEMMD 218 (482)
T ss_dssp EEEEESCSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCeEEEEEECC
Confidence 689999999999999999987 89999999875
No 253
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=93.37 E-value=0.063 Score=61.08 Aligned_cols=36 Identities=22% Similarity=0.299 Sum_probs=31.2
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
+..-+||||||+||+.+|.+|... +.+|+|+|+.+.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~-~~~itlie~~~~ 43 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGK-CDDITMINSEKY 43 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTT-CSCEEEECSSSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCC-CCEEEEEECCCC
Confidence 345799999999999999999554 899999999874
No 254
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.35 E-value=0.065 Score=62.61 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=28.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 179 ~vvViGgG~~g~e~A~~l~~~-g~~Vtli~~~~ 210 (470)
T 1dxl_A 179 KLVVIGAGYIGLEMGSVWGRI-GSEVTVVEFAS 210 (470)
T ss_dssp EEEESCCSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCC
Confidence 688999999999999999887 88999999875
No 255
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.05 E-value=0.2 Score=59.85 Aligned_cols=32 Identities=25% Similarity=0.312 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 184 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHL-GIKTTLLELAD 184 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCcEEEEEcCC
Confidence 799999999999999999998 99999999986
No 256
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=92.78 E-value=0.38 Score=56.16 Aligned_cols=32 Identities=25% Similarity=0.297 Sum_probs=28.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 182 ~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 213 (476)
T 3lad_A 182 KLGVIGAGVIGLELGSVWARL-GAEVTVLEAMD 213 (476)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCcEEEEecCC
Confidence 589999999999999999988 88999999875
No 257
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=92.67 E-value=0.19 Score=59.00 Aligned_cols=60 Identities=10% Similarity=0.162 Sum_probs=40.9
Q ss_pred hhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHH--HHhCCC
Q psy4102 299 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQL--LMVSGI 364 (1049)
Q Consensus 299 ~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~L--Ll~SGI 364 (1049)
.++.|++|++++.|+++..+ ++. ..|.+.+ +|+..++.++ .||+|+|---...+ |..+|+
T Consensus 249 l~~~gV~v~~~~~v~~i~~~----~~~-~~v~~~~~~~g~~~~i~~D-~Vi~a~G~~p~~~~l~l~~~g~ 312 (491)
T 3urh_A 249 LTKQGIDFKLGAKVTGAVKS----GDG-AKVTFEPVKGGEATTLDAE-VVLIATGRKPSTDGLGLAKAGV 312 (491)
T ss_dssp HHHTTCEEECSEEEEEEEEE----TTE-EEEEEEETTSCCCEEEEES-EEEECCCCEECCTTSCHHHHTC
T ss_pred HHhCCCEEEECCeEEEEEEe----CCE-EEEEEEecCCCceEEEEcC-EEEEeeCCccCCCccCchhcCc
Confidence 35668999999999999876 233 3355543 2544578897 59999997654443 555555
No 258
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=92.65 E-value=0.15 Score=59.37 Aligned_cols=59 Identities=17% Similarity=0.192 Sum_probs=38.9
Q ss_pred hhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHH--HHhCCC
Q psy4102 298 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL--LMVSGI 364 (1049)
Q Consensus 298 ~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~L--Ll~SGI 364 (1049)
.+++.|++|++++.|++|..++ ++ ++.|....+|+ +.++ .||+|+|......+ |...|+
T Consensus 220 ~l~~~Gv~i~~~~~v~~i~~~~---~~-~~~v~~~~~g~---i~aD-~Vv~a~G~~p~~~~l~l~~~g~ 280 (463)
T 4dna_A 220 AMEEKGIRILCEDIIQSVSADA---DG-RRVATTMKHGE---IVAD-QVMLALGRMPNTNGLGLEAAGV 280 (463)
T ss_dssp HHHHTTCEEECSCCEEEEEECT---TS-CEEEEESSSCE---EEES-EEEECSCEEESCTTSSTGGGTC
T ss_pred HHHHCCCEEECCCEEEEEEEcC---CC-EEEEEEcCCCe---EEeC-EEEEeeCcccCCCCCCccccCc
Confidence 3456789999999999998762 23 34555123453 8897 59999997655444 344444
No 259
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=92.04 E-value=0.32 Score=56.83 Aligned_cols=32 Identities=25% Similarity=0.233 Sum_probs=28.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 220 (478)
T 3dk9_A 189 RSVIVGAGYIAVEMAGILSAL-GSKTSLMIRHD 220 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHHc-CCeEEEEEeCC
Confidence 589999999999999999988 88999999875
No 260
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=92.02 E-value=0.96 Score=52.32 Aligned_cols=32 Identities=25% Similarity=0.281 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 149 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 180 (452)
T 3oc4_A 149 TVAVIGAGPIGMEAIDFLVKM-KKTVHVFESLE 180 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEEccC
Confidence 699999999999999999998 89999999986
No 261
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=91.54 E-value=0.23 Score=58.51 Aligned_cols=59 Identities=14% Similarity=0.194 Sum_probs=38.6
Q ss_pred HhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHH--HHhCCC
Q psy4102 297 PIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL--LMVSGI 364 (1049)
Q Consensus 297 ~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~L--Ll~SGI 364 (1049)
...++.|++|++++.|++|..+ ++++ .|+. .+|+ ++.++ .||+|+|..-...+ |...|+
T Consensus 231 ~~l~~~GV~i~~~~~V~~i~~~----~~~v-~v~~-~~g~--~i~aD-~Vv~a~G~~p~~~~l~l~~~gl 291 (499)
T 1xdi_A 231 ESFAERGVRLFKNARAASVTRT----GAGV-LVTM-TDGR--TVEGS-HALMTIGSVPNTSGLGLERVGI 291 (499)
T ss_dssp HHHHHTTCEEETTCCEEEEEEC----SSSE-EEEE-TTSC--EEEES-EEEECCCEEECCSSSCTTTTTC
T ss_pred HHHHHCCCEEEeCCEEEEEEEe----CCEE-EEEE-CCCc--EEEcC-EEEECCCCCcCCCcCCchhcCc
Confidence 3445678999999999999865 2332 2332 3444 57887 59999997655445 334444
No 262
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=91.54 E-value=0.26 Score=57.76 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 193 ~v~ViGgG~~g~e~A~~l~~~-g~~Vtli~~~~ 224 (484)
T 3o0h_A 193 SIVIVGGGYIGVEFANIFHGL-GVKTTLLHRGD 224 (484)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred cEEEECcCHHHHHHHHHHHHc-CCeEEEEECCC
Confidence 689999999999999999988 88999999875
No 263
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.40 E-value=0.58 Score=51.10 Aligned_cols=59 Identities=15% Similarity=0.188 Sum_probs=43.2
Q ss_pred hcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 300 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 300 ~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
++.|+++++++.|++|..+ + .+.+|.+.+ +|+..++.++ .||+|+|....+.+|..+|+
T Consensus 200 ~~~gv~~~~~~~v~~i~~~----~-~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~~~ 260 (332)
T 3lzw_A 200 HASKVNVLTPFVPAELIGE----D-KIEQLVLEEVKGDRKEILEID-DLIVNYGFVSSLGPIKNWGL 260 (332)
T ss_dssp HHSSCEEETTEEEEEEECS----S-SCCEEEEEETTSCCEEEEECS-EEEECCCEECCCGGGGGSSC
T ss_pred hcCCeEEEeCceeeEEecC----C-ceEEEEEEecCCCceEEEECC-EEEEeeccCCCchHHhhcCc
Confidence 3468999999999999765 2 256777765 4556678997 69999997665566666655
No 264
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=91.32 E-value=0.29 Score=57.50 Aligned_cols=60 Identities=12% Similarity=0.246 Sum_probs=39.9
Q ss_pred HhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHH-H-HHhCCC
Q psy4102 297 PIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQ-L-LMVSGI 364 (1049)
Q Consensus 297 ~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~-L-Ll~SGI 364 (1049)
...++.|++|++++.|++|..+ ++..+.|++ .+|+ ++.++ .||+|+|..-... | |..+|+
T Consensus 243 ~~l~~~GV~i~~~~~v~~i~~~----~~~~~~v~~-~~G~--~i~~D-~vv~a~G~~p~~~~L~l~~~gl 304 (495)
T 2wpf_A 243 KQLTANGIEIMTNENPAKVSLN----TDGSKHVTF-ESGK--TLDVD-VVMMAIGRIPRTNDLQLGNVGV 304 (495)
T ss_dssp HHHHHTTCEEEESCCEEEEEEC----TTSCEEEEE-TTSC--EEEES-EEEECSCEEECCGGGTGGGTTC
T ss_pred HHHHhCCCEEEeCCEEEEEEEc----CCceEEEEE-CCCc--EEEcC-EEEECCCCcccccccchhhcCc
Confidence 3345678999999999999765 222345554 3554 58897 5999999754443 3 345554
No 265
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=91.31 E-value=0.82 Score=53.47 Aligned_cols=56 Identities=4% Similarity=-0.018 Sum_probs=38.9
Q ss_pred hhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHH
Q psy4102 298 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQL 358 (1049)
Q Consensus 298 ~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~L 358 (1049)
..++.|++|++++.|++|.... ++. ..|.+.+ +|+..++.++ .||+|+|-.-...+
T Consensus 234 ~l~~~gv~~~~~~~v~~i~~~~---~~~-~~v~~~~~~~g~~~~~~~D-~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 234 HMESHGTQFLKGCVPSHIKKLP---TNQ-LQVTWEDHASGKEDTGTFD-TVLWAIGRVPETRT 291 (488)
T ss_dssp HHHHTTCEEEETEEEEEEEECT---TSC-EEEEEEETTTTEEEEEEES-EEEECSCEEESCGG
T ss_pred HHHHCCCEEEeCCEEEEEEEcC---CCc-EEEEEEeCCCCeeEEEECC-EEEEcccCCcccCc
Confidence 3456789999999999997641 233 3355554 3666678897 59999997655444
No 266
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=91.30 E-value=0.23 Score=58.34 Aligned_cols=60 Identities=10% Similarity=0.146 Sum_probs=39.3
Q ss_pred HhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHH-H-HHhCCC
Q psy4102 297 PIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQ-L-LMVSGI 364 (1049)
Q Consensus 297 ~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~-L-Ll~SGI 364 (1049)
..+++.|++|++++.|++|..++ ++ ...|++ .+|+ ++.++ .||+|+|..-... | |..+|+
T Consensus 239 ~~l~~~GV~i~~~~~v~~i~~~~---~~-~~~v~~-~~G~--~i~~D-~vv~a~G~~p~~~~L~l~~~gl 300 (490)
T 1fec_A 239 EQLRANGINVRTHENPAKVTKNA---DG-TRHVVF-ESGA--EADYD-VVMLAIGRVPRSQTLQLEKAGV 300 (490)
T ss_dssp HHHHHTTEEEEETCCEEEEEECT---TS-CEEEEE-TTSC--EEEES-EEEECSCEEESCTTSCGGGGTC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcC---CC-EEEEEE-CCCc--EEEcC-EEEEccCCCcCccccCchhcCc
Confidence 33456789999999999997651 22 234554 3554 58897 5999999654433 3 344454
No 267
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=91.30 E-value=0.34 Score=58.22 Aligned_cols=55 Identities=15% Similarity=0.239 Sum_probs=40.6
Q ss_pred hhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 299 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 299 ~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
.++.|++|++++.|++|..+ ++ +|.+ .+|+ ++.++ .||+|+|......+|..+|+
T Consensus 238 l~~~GV~i~~~~~v~~i~~~----~~---~v~~-~~g~--~i~~D-~Vi~a~G~~p~~~~l~~~g~ 292 (588)
T 3ics_A 238 MKNHDVELVFEDGVDALEEN----GA---VVRL-KSGS--VIQTD-MLILAIGVQPESSLAKGAGL 292 (588)
T ss_dssp HHHTTCEEECSCCEEEEEGG----GT---EEEE-TTSC--EEECS-EEEECSCEEECCHHHHHTTC
T ss_pred HHHcCCEEEECCeEEEEecC----CC---EEEE-CCCC--EEEcC-EEEEccCCCCChHHHHhcCc
Confidence 34568999999999999654 22 3544 3554 57897 59999998777678888876
No 268
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=91.29 E-value=0.62 Score=54.66 Aligned_cols=57 Identities=18% Similarity=0.283 Sum_probs=42.2
Q ss_pred hhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 299 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 299 ~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
.++.|++|++++.|++|..+ ++++ .|++ .+|+ ++.++ .||+|+|...+..++..+|+
T Consensus 236 l~~~GV~v~~~~~V~~i~~~----~~~~-~v~l-~dG~--~i~aD-~Vv~a~G~~pn~~l~~~~gl 292 (493)
T 1m6i_A 236 VRREGVKVMPNAIVQSVGVS----SGKL-LIKL-KDGR--KVETD-HIVAAVGLEPNVELAKTGGL 292 (493)
T ss_dssp HHTTTCEEECSCCEEEEEEE----TTEE-EEEE-TTSC--EEEES-EEEECCCEEECCTTHHHHTC
T ss_pred HHhcCCEEEeCCEEEEEEec----CCeE-EEEE-CCCC--EEECC-EEEECCCCCccHHHHHHcCC
Confidence 45679999999999999765 2343 4554 3554 58897 59999998766667777776
No 269
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=90.56 E-value=0.97 Score=52.75 Aligned_cols=62 Identities=11% Similarity=0.021 Sum_probs=41.9
Q ss_pred hhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHH--HhCCC
Q psy4102 298 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLL--MVSGI 364 (1049)
Q Consensus 298 ~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LL--l~SGI 364 (1049)
..++.|++|++++.|++|..++ ++++ .|.+.+ +++..++.++ .||+|+|--....+| ...|+
T Consensus 236 ~l~~~Gv~i~~~~~v~~i~~~~---~~~~-~v~~~~~~~~~~~~~~~D-~vi~a~G~~p~~~~l~l~~~gl 301 (483)
T 3dgh_A 236 SMEERGIPFLRKTVPLSVEKQD---DGKL-LVKYKNVETGEESEDVYD-TVLWAIGRKGLVDDLNLPNAGV 301 (483)
T ss_dssp HHHHTTCCEEETEEEEEEEECT---TSCE-EEEEEETTTCCEEEEEES-EEEECSCEEECCGGGTGGGTTC
T ss_pred HHHhCCCEEEeCCEEEEEEEcC---CCcE-EEEEecCCCCceeEEEcC-EEEECcccccCcCcCCchhcCc
Confidence 3456789999999999998752 3333 466654 2455678997 599999976554444 44444
No 270
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.99 E-value=1.5 Score=56.44 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
.|+|||||..|+-+|..|++. |. +|.|+|+.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~-G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRC-GARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHc-CCCEEEEEEecC
Confidence 799999999999999999998 75 899999875
No 271
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=89.57 E-value=0.41 Score=56.33 Aligned_cols=54 Identities=13% Similarity=0.168 Sum_probs=34.8
Q ss_pred HhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCe--EEEEEcCeEEEEcCCCcchHH
Q psy4102 297 PIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGR--KHIIRAKKEIISSAGAINSPQ 357 (1049)
Q Consensus 297 ~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~--~~~v~A~k~VILAAGa~~Tp~ 357 (1049)
...++.|++|++++.|+++.-+ +.+..+.. .+|+ ..+|.++ .||.|+|.-.+|.
T Consensus 280 ~~L~~~GV~v~~~~~v~~v~~~-----~~~~~~~~-~dg~~~~~~i~ad-~viwa~Gv~~~~~ 335 (502)
T 4g6h_A 280 SHLENTSIKVHLRTAVAKVEEK-----QLLAKTKH-EDGKITEETIPYG-TLIWATGNKARPV 335 (502)
T ss_dssp HHHHHTTCEEETTEEEEEECSS-----EEEEEEEC-TTSCEEEEEEECS-EEEECCCEECCHH
T ss_pred HHHHhcceeeecCceEEEEeCC-----ceEEEEEe-cCcccceeeeccC-EEEEccCCcCCHH
Confidence 3446779999999999998422 22222221 2443 3468997 5999999665553
No 272
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=87.32 E-value=1.4 Score=56.18 Aligned_cols=32 Identities=13% Similarity=0.160 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+.+
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~-G~~Vtvv~~~~ 317 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAAT-GGVVAVIDARS 317 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGG-TCCSEEEESCS
T ss_pred eEEEEcCCHHHHHHHHHHHHc-CCcEEEEECCC
Confidence 599999999999999999998 88899999975
No 273
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=86.92 E-value=0.42 Score=55.31 Aligned_cols=35 Identities=23% Similarity=0.375 Sum_probs=32.3
Q ss_pred CCccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 89 RAYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
...+++|||+|.+|+-+|..|++. |.+|.|+|+++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~-g~~Vtlv~~~~ 182 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKA-GKKVTVIDILD 182 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCeEEEEecCc
Confidence 346899999999999999999998 99999999986
No 274
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=86.27 E-value=0.53 Score=44.86 Aligned_cols=32 Identities=22% Similarity=0.534 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||.|..|..+|..|.+. |.+|+++|+.+
T Consensus 9 ~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 40 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLAS-DIPLVVIETSR 40 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred CEEEECcCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 599999999999999999998 99999999875
No 275
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=86.19 E-value=0.54 Score=44.67 Aligned_cols=32 Identities=28% Similarity=0.534 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|+|+|..|..+|..|.+. |.+|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAA-GKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 599999999999999999998 99999999864
No 276
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=85.57 E-value=0.63 Score=45.16 Aligned_cols=33 Identities=18% Similarity=0.460 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.++|||+|..|..+|..|.+. |.+|+++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 3699999999999999999998 89999999864
No 277
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=85.18 E-value=0.67 Score=50.42 Aligned_cols=33 Identities=18% Similarity=0.311 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.++|||||..|+-+|..|++. |.+|.|+|+++.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKF-ADKVTIVHRRDE 179 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEecccc
Confidence 699999999999999999998 999999999863
No 278
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=85.05 E-value=0.7 Score=43.39 Aligned_cols=32 Identities=34% Similarity=0.533 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|..+|..|++. |.+|.++|+.+
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEK-GHDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 699999999999999999998 89999999853
No 279
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=83.78 E-value=0.6 Score=52.87 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+.+.
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~ 180 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDS-GTPASIGIILEY 180 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCc
Confidence 699999999999999999998 899999999873
No 280
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=83.63 E-value=0.81 Score=44.19 Aligned_cols=32 Identities=19% Similarity=0.197 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|+|+|..|..+|..|.+. |.+|+++|+.+
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~~ 36 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQR-GQNVTVISNLP 36 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 599999999999999999998 89999999853
No 281
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=82.16 E-value=0.91 Score=52.52 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.++|||+|.+|+-+|..|++. |.+|.|+|+++
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~-g~~V~lv~~~~ 200 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRL-GAEVIVLEYMD 200 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEecCC
Confidence 3699999999999999999998 89999999986
No 282
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=82.05 E-value=1.2 Score=48.32 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.++|||+|..|+-+|..|++. |.+|.|+|+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~-G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY-GSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHh-CCeeeeecccc
Confidence 3699999999999999999998 99999999876
No 283
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=82.05 E-value=0.77 Score=53.28 Aligned_cols=32 Identities=19% Similarity=0.330 Sum_probs=30.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|.+|+-+|..|++. |.+|.|+|+++
T Consensus 173 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 204 (458)
T 1lvl_A 173 HLVVVGGGYIGLELGIAYRKL-GAQVSVVEARE 204 (458)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred eEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCC
Confidence 699999999999999999998 89999999986
No 284
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=81.90 E-value=0.89 Score=51.07 Aligned_cols=32 Identities=34% Similarity=0.616 Sum_probs=30.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 145 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 176 (367)
T 1xhc_A 145 EAIIIGGGFIGLELAGNLAEA-GYHVKLIHRGA 176 (367)
T ss_dssp EEEEEECSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCC
Confidence 699999999999999999998 89999999986
No 285
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=81.57 E-value=1.1 Score=40.51 Aligned_cols=32 Identities=22% Similarity=0.465 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCC-CeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPD-WKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G-~kVLVLEaG~ 124 (1049)
.++|+|+|..|..+|..|.+. | .+|.++++.+
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTS-SNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCH
Confidence 599999999999999999998 7 8999999864
No 286
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=79.78 E-value=1.2 Score=42.05 Aligned_cols=32 Identities=25% Similarity=0.496 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|+|+|..|..+|..|.+. |.+|.++++.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM-GHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 499999999999999999998 89999999753
No 287
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=79.33 E-value=1.3 Score=51.17 Aligned_cols=32 Identities=25% Similarity=0.250 Sum_probs=30.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 169 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 200 (450)
T 1ges_A 169 RVAVVGAGYIGVELGGVINGL-GAKTHLFEMFD 200 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCEEEEEEeCC
Confidence 699999999999999999998 99999999986
No 288
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=78.12 E-value=1.5 Score=49.90 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 178 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTA-GVHVSLVETQP 178 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCC
Confidence 4799999999999999999998 89999999986
No 289
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=77.04 E-value=1.6 Score=48.36 Aligned_cols=32 Identities=28% Similarity=0.434 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~-g~~V~lv~~~~ 199 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKN-GSDIALYTSTT 199 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECC--
T ss_pred EEEEECCCcCHHHHHHHHHhc-CCeEEEEecCC
Confidence 699999999999999999998 89999999986
No 290
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=76.06 E-value=1.9 Score=50.06 Aligned_cols=32 Identities=22% Similarity=0.304 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~-G~~Vtlv~~~~ 199 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSF-GSEVTVVALED 199 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCC
Confidence 699999999999999999998 99999999986
No 291
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=76.01 E-value=1.8 Score=50.49 Aligned_cols=32 Identities=25% Similarity=0.432 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 196 ~vvVIGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 227 (490)
T 2bc0_A 196 RVAVVGAGYIGVELAEAFQRK-GKEVVLIDVVD 227 (490)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCeEEEEEccc
Confidence 699999999999999999998 89999999986
No 292
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=75.62 E-value=1.6 Score=44.85 Aligned_cols=32 Identities=16% Similarity=0.393 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|||+|..|..+|..|.+. |.+|+++|+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-KYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 389999999999999999998 99999999864
No 293
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=75.37 E-value=2 Score=49.52 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCe-EEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWK-ILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~k-VLVLEaG~ 124 (1049)
.|+|||+|..|+-+|..|++. +.+ |.|+++++
T Consensus 214 ~VvVvG~G~sg~e~A~~l~~~-~~~~V~l~~r~~ 246 (447)
T 2gv8_A 214 SVLVVGGASSANDLVRHLTPV-AKHPIYQSLLGG 246 (447)
T ss_dssp CEEEECSSHHHHHHHHHHTTT-SCSSEEEECTTC
T ss_pred EEEEEccCcCHHHHHHHHHHH-hCCcEEEEeCCC
Confidence 699999999999999999998 788 99999986
No 294
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=74.80 E-value=2.2 Score=46.73 Aligned_cols=32 Identities=19% Similarity=0.433 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||+|..|+..|..|+++ |.+|.++.+.+
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh
Confidence 589999999999999999998 89999999864
No 295
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=73.92 E-value=2.2 Score=46.81 Aligned_cols=32 Identities=19% Similarity=0.422 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-|.|||+|..|...|..+|.+ |.+|+|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~-G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 499999999999999999998 99999999754
No 296
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=73.88 E-value=2.2 Score=46.60 Aligned_cols=32 Identities=16% Similarity=0.276 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||+|..|+..|..|+++ |.+|.++.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc
Confidence 489999999999999999998 89999999864
No 297
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=73.51 E-value=2.3 Score=48.93 Aligned_cols=32 Identities=22% Similarity=0.468 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 181 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQ-GKNVTMIVRGE 181 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCC
Confidence 799999999999999999998 89999999987
No 298
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=72.98 E-value=2.6 Score=49.97 Aligned_cols=33 Identities=24% Similarity=0.264 Sum_probs=31.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.|+|||+|..|+-+|..|++. +.+|.|+++.+.
T Consensus 180 rV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 180 RVGVIGTGSTGQQVITSLAPE-VEHLTVFVRTPQ 212 (540)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-CSEEEEEESSCC
T ss_pred eEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 699999999999999999998 899999999975
No 299
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=72.84 E-value=2.2 Score=49.50 Aligned_cols=32 Identities=9% Similarity=0.110 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.|+|||+|..|+-+|..|++. |.+|.++++.+
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~-g~~V~li~~~~ 230 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKY-GAKKLISCYRT 230 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCSEEEEECSS
T ss_pred EEEEEcCCCCHHHHHHHHHHh-CCeEEEEEECC
Confidence 699999999999999999998 89999999876
No 300
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=72.75 E-value=2.4 Score=50.23 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=31.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.|+|||+|..|+-+|..|++. +.+|.|+++.+.
T Consensus 187 rV~VIG~G~tgve~a~~la~~-~~~Vtv~~r~~~ 219 (545)
T 3uox_A 187 RVGVIGTGATGVQIIPIAAET-AKELYVFQRTPN 219 (545)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-BSEEEEEESSCC
T ss_pred eEEEECCCccHHHHHHHHHhh-CCEEEEEEcCCC
Confidence 699999999999999999998 899999999985
No 301
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=72.72 E-value=4.4 Score=46.72 Aligned_cols=53 Identities=13% Similarity=0.103 Sum_probs=40.3
Q ss_pred chHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCc
Q psy4102 294 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 353 (1049)
Q Consensus 294 ~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~ 353 (1049)
.|...+++.|++|+++++|++|..+. ++++++||.. +|+ +++|+. ||+|+|.+
T Consensus 247 al~~~~~~~G~~i~~~~~V~~i~~~~--~~~~~~~V~~--~g~--~~~ad~-VV~a~~~~ 299 (453)
T 2bcg_G 247 GFARLSAIYGGTYMLDTPIDEVLYKK--DTGKFEGVKT--KLG--TFKAPL-VIADPTYF 299 (453)
T ss_dssp HHHHHHHHTTCEEECSCCCCEEEEET--TTTEEEEEEE--TTE--EEECSC-EEECGGGC
T ss_pred HHHHHHHHcCCEEECCCEEEEEEEEC--CCCeEEEEEE--CCe--EEECCE-EEECCCcc
Confidence 34455667799999999999998761 1368888875 455 578974 99999976
No 302
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=72.12 E-value=2.3 Score=48.88 Aligned_cols=33 Identities=27% Similarity=0.358 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYER-GLHPTLIHRSDK 181 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSC
T ss_pred EEEEECCccchhhhHHHHHhc-CCcceeeeeecc
Confidence 699999999999999999998 999999999873
No 303
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=71.49 E-value=3.1 Score=45.53 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.++|||+|..|+-+|..|++. |.+|.++++++
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~-g~~V~l~~~~~ 188 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRF-ARSVTLVHRRD 188 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTT-CSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCeEEEEEcCC
Confidence 3699999999999999999998 89999999886
No 304
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=70.98 E-value=2.9 Score=47.89 Aligned_cols=51 Identities=14% Similarity=0.256 Sum_probs=40.1
Q ss_pred chHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCc
Q psy4102 294 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 353 (1049)
Q Consensus 294 ~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~ 353 (1049)
.|...+++.|++|+++++|++|..+ +++++||.. +|+ +++|+ .||+|+|..
T Consensus 239 ~l~~~~~~~G~~i~~~~~V~~I~~~----~~~v~~v~~--~g~--~~~ad-~VV~a~~~~ 289 (433)
T 1d5t_A 239 GFARLSAIYGGTYMLNKPVDDIIME----NGKVVGVKS--EGE--VARCK-QLICDPSYV 289 (433)
T ss_dssp HHHHHHHHHTCCCBCSCCCCEEEEE----TTEEEEEEE--TTE--EEECS-EEEECGGGC
T ss_pred HHHHHHHHcCCEEECCCEEEEEEEe----CCEEEEEEE--CCe--EEECC-EEEECCCCC
Confidence 3445556679999999999999987 478888873 565 57897 599999976
No 305
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=70.76 E-value=6.4 Score=44.11 Aligned_cols=34 Identities=26% Similarity=0.444 Sum_probs=30.3
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
+--|||+|+|.+|..+|..|... |. +|.++|+-+
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~-Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAA-GATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 45799999999999999999987 77 999999875
No 306
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=70.65 E-value=3.1 Score=43.05 Aligned_cols=32 Identities=13% Similarity=0.252 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
--++|||||-.|...|..|.+. |.+|.|++..
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap~ 63 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQE-GAAITVVAPT 63 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGG-CCCEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEECCC
Confidence 4699999999999999999998 8999999863
No 307
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=70.30 E-value=3.1 Score=48.10 Aligned_cols=32 Identities=16% Similarity=0.239 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 178 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 209 (467)
T 1zk7_A 178 RLAVIGSSVVALELAQAFARL-GSKVTVLARNT 209 (467)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCEEEEEEECC
Confidence 699999999999999999998 89999999986
No 308
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=69.75 E-value=3.3 Score=44.93 Aligned_cols=32 Identities=25% Similarity=0.423 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||+|..|..+|..|++. |.+|.++++.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 499999999999999999998 99999999864
No 309
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=69.49 E-value=3.4 Score=44.41 Aligned_cols=32 Identities=16% Similarity=0.325 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||+|..|..+|..|++. |.+|.+.++.+
T Consensus 6 kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 489999999999999999998 99999999864
No 310
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=69.11 E-value=3.2 Score=45.79 Aligned_cols=31 Identities=26% Similarity=0.477 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
-+.|||+|..|+..|..|+++ |.+|.++.+.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~-g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALA-GEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHT-TCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCEEEEEECh
Confidence 589999999999999999998 8999999985
No 311
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=68.89 E-value=3.8 Score=43.76 Aligned_cols=31 Identities=16% Similarity=0.196 Sum_probs=29.0
Q ss_pred EEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+.|||+|..|...|..|++. |.+|.++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQ-GHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHhC-CCCEEEEEcCc
Confidence 78999999999999999998 89999999875
No 312
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=68.87 E-value=2.7 Score=44.97 Aligned_cols=32 Identities=22% Similarity=0.405 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
--++|||+|-.|...|..|.+. |.+|.|++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~-Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPT-GCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGG-TCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhC-CCEEEEEcCC
Confidence 3599999999999999999998 9999999864
No 313
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=68.80 E-value=2.7 Score=49.89 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=31.0
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.|+|||+|..|+-+|..|++. +.+|.|+++.+.
T Consensus 193 rV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 193 RVGVIGTGSSGIQSIPIIAEQ-AEQLFVFQRSAN 225 (549)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCC
T ss_pred EEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 599999999999999999998 899999999984
No 314
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=68.76 E-value=2.5 Score=41.95 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||.|..|..+|..|.+..|.+|+++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 599999999999999999874268999999864
No 315
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=68.70 E-value=3 Score=43.98 Aligned_cols=33 Identities=15% Similarity=0.369 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
-.|+|||+|..|+.+|..|+.. |. +|.|++...
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence 4699999999999999999998 75 899999864
No 316
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=68.67 E-value=4.3 Score=41.43 Aligned_cols=33 Identities=9% Similarity=0.322 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..+.|||+|..|..+|..|++. |.+|.++++.+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~-g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA-GHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 3699999999999999999998 89999998865
No 317
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=68.60 E-value=2.8 Score=48.53 Aligned_cols=32 Identities=28% Similarity=0.621 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+||+|+|-.|..+|..|++. |.+|+|||+.+
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGE-NNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCST-TEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 499999999999999999998 99999999875
No 318
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=68.19 E-value=3.7 Score=46.49 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
-.++|||+|..|+-+|..|++. |.+|.++|+.+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~ 176 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAK-GLEVDVVELAPR 176 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCc
Confidence 3699999999999999999998 899999999863
No 319
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=67.82 E-value=2.6 Score=45.62 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||+|..|+..|..|+++ |.+|.++.+..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~-g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQS-LPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 489999999999999999998 88999999874
No 320
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=67.68 E-value=8.8 Score=42.88 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=30.1
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
+--|+|+|+|.+|..+|..|... |. +|.|+++-+
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~-G~~~I~v~Dr~G 226 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDL-GVKNVVAVDRKG 226 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CcEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCC
Confidence 35799999999999999999987 66 899999874
No 321
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=67.51 E-value=3.9 Score=46.45 Aligned_cols=34 Identities=29% Similarity=0.327 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
-.++|||+|..|+-+|..|++. |.+|.++|+.+.
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~ 186 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKF-GVNVTLLEALPR 186 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEecCCc
Confidence 3699999999999999999998 899999999873
No 322
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=67.08 E-value=4 Score=47.26 Aligned_cols=32 Identities=28% Similarity=0.372 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 174 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 205 (466)
T 3l8k_A 174 DMVIIGAGYIGLEIASIFRLM-GVQTHIIEMLD 205 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCC
Confidence 699999999999999999998 89999999986
No 323
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=67.05 E-value=4.3 Score=44.14 Aligned_cols=31 Identities=26% Similarity=0.330 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||+|..|+..|..|+ + |.+|.++.+.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-c-CCceEEEECCH
Confidence 5899999999999999999 7 89999999875
No 324
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=66.48 E-value=3.7 Score=49.22 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASL-GGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCEEEEEECC
Confidence 599999999999999999998 8999999987
No 325
>2pq4_B Periplasmic nitrate reductase precursor; NAPD/NAPA1-35, mixed beta-alpha sandwich structure, protein- peptide complex, alpha-helix; NMR {Escherichia coli}
Probab=66.32 E-value=1.5 Score=31.14 Aligned_cols=18 Identities=33% Similarity=0.348 Sum_probs=13.1
Q ss_pred CCCCCCCccccchhhHHHH
Q psy4102 38 MDPESRPTNTKTDKVTAAM 56 (1049)
Q Consensus 38 ~~~~~r~~~~~~~~~~~a~ 56 (1049)
|..+|| +|||+.++++++
T Consensus 1 M~lsRR-~FLK~~aaa~Aa 18 (35)
T 2pq4_B 1 MKLSRR-SFMKANAVAAAA 18 (35)
T ss_dssp CCCCSH-HHHHHHHHHHHH
T ss_pred CCCcHH-HHHHHHHHHHHH
Confidence 566788 999977665554
No 326
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=66.29 E-value=6.9 Score=47.05 Aligned_cols=56 Identities=14% Similarity=0.030 Sum_probs=40.9
Q ss_pred hhHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCC
Q psy4102 290 TSKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAG 351 (1049)
Q Consensus 290 ~~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAG 351 (1049)
.....|.+.+++.|.+|++++.|++|++++ +.++++||. ..+|+ +++|+ .||..+.
T Consensus 379 ~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~--~~g~v~gV~-~~~Ge--~i~A~-~VVs~~~ 434 (650)
T 1vg0_A 379 ELPQCFCRMCAVFGGIYCLRHSVQCLVVDK--ESRKCKAVI-DQFGQ--RIISK-HFIIEDS 434 (650)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEET--TTCCEEEEE-ETTSC--EEECS-EEEEEGG
T ss_pred HHHHHHHHHHHHcCCEEEeCCEeeEEEEeC--CCCeEEEEE-eCCCC--EEEcC-EEEEChh
Confidence 344456677788899999999999999982 127899988 34565 57896 4776444
No 327
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=65.42 E-value=4.5 Score=44.15 Aligned_cols=33 Identities=27% Similarity=0.425 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC--eEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDW--KILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~--kVLVLEaG~ 124 (1049)
.-+.|||+|..|..+|..|++. |. +|.++++..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 3599999999999999999998 77 999999864
No 328
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=65.01 E-value=4.6 Score=43.65 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||+|..|...|..|++. |.+|.++++.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 489999999999999999998 89999998753
No 329
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=64.83 E-value=4.6 Score=44.19 Aligned_cols=30 Identities=27% Similarity=0.526 Sum_probs=27.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
.+.|||+|..|+..|..|+++ |.+|.++ +-
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~ 50 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARA-GHEVILI-AR 50 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEE-CC
T ss_pred cEEEECcCHHHHHHHHHHHHC-CCeEEEE-Ec
Confidence 589999999999999999998 8999999 54
No 330
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=63.76 E-value=5.9 Score=44.12 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.+.|||+|..|.++|..|+++ |.+|.+.++.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-GQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4699999999999999999998 89999999864
No 331
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=63.59 E-value=4.7 Score=45.95 Aligned_cols=32 Identities=19% Similarity=0.372 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.|||||.|-.|..+|..|.+. |.+|++||+.+
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~ 37 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDP 37 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEECCH
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 599999999999999999998 99999999875
No 332
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=62.63 E-value=5.4 Score=46.92 Aligned_cols=33 Identities=6% Similarity=0.165 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~ 247 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT-GRRTVMLVRTE 247 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEecC
Confidence 4799999999999999999998 89999999987
No 333
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=62.59 E-value=5.6 Score=42.39 Aligned_cols=32 Identities=25% Similarity=0.260 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|+|+|.+|..+|..|++. |.+|.++.|..
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~~ 152 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSL-DCAVTITNRTV 152 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 599999999999999999998 79999998753
No 334
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=61.59 E-value=3.8 Score=38.87 Aligned_cols=32 Identities=16% Similarity=0.294 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||+|..|..+|..|.+. |.+|.+.++..
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~-g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYP-QYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTT-TCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 599999999999999999986 88899998864
No 335
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=61.39 E-value=5.6 Score=46.25 Aligned_cols=33 Identities=21% Similarity=0.476 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.-+.|||.|..|+.+|..|++. |.+|+++++.+
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 4689999999999999999998 99999999754
No 336
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=61.17 E-value=6.1 Score=41.90 Aligned_cols=32 Identities=19% Similarity=0.048 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.++|||+|..|+-+|..|++. | +|.++++++
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~-g-~v~~v~~~~ 173 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDW-G-ETTFFTNGI 173 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGT-S-EEEEECTTT
T ss_pred CEEEEEecCccHHHHHHHhhhc-C-cEEEEECCC
Confidence 3799999999999999999998 7 999999876
No 337
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=60.65 E-value=5.9 Score=43.38 Aligned_cols=32 Identities=19% Similarity=0.422 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||+|..|...|..|+++ |.+|.+.++.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999998 99999999864
No 338
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=60.12 E-value=5.6 Score=45.83 Aligned_cols=58 Identities=12% Similarity=0.096 Sum_probs=39.9
Q ss_pred HHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHH
Q psy4102 292 KAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL 358 (1049)
Q Consensus 292 ~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~L 358 (1049)
...|...+++.|++|+++++|++|..++ +.+..|.. +++ ++.|+ .||+|+++....+|
T Consensus 237 ~~~l~~~l~~~g~~i~~~~~V~~i~~~~----~~~~~v~~--~~~--~~~ad-~vv~a~p~~~~~~l 294 (477)
T 3nks_A 237 PQALETHLTSRGVSVLRGQPVCGLSLQA----EGRWKVSL--RDS--SLEAD-HVISAIPASVLSEL 294 (477)
T ss_dssp HHHHHHHHHHTTCEEECSCCCCEEEECG----GGCEEEEC--SSC--EEEES-EEEECSCHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEEcC----CceEEEEE--CCe--EEEcC-EEEECCCHHHHHHh
Confidence 3344455566799999999999998862 33334533 444 48897 59999987655555
No 339
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=59.80 E-value=6.3 Score=43.51 Aligned_cols=32 Identities=22% Similarity=0.391 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||+|..|...|..|++. |.+|.++++.+
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~~ 37 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALK-GQSVLAWDIDA 37 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 599999999999999999998 89999998753
No 340
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=59.75 E-value=5.9 Score=46.51 Aligned_cols=31 Identities=16% Similarity=0.191 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
.++|||+|..|+-+|..|++. |.+|.|+|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~-G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGI-GLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHc-CCeEEEEecc
Confidence 599999999999999999998 9999999985
No 341
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=59.72 E-value=6.5 Score=45.47 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||+|..|..+|..|+++ |.+|+++|+.+
T Consensus 39 kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 599999999999999999998 99999999864
No 342
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=59.34 E-value=7.6 Score=39.31 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=28.3
Q ss_pred EEEEC-CChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIG-AGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG-~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+.||| +|..|..+|..|++. |.+|.++++.+
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~~ 34 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATL-GHEIVVGSRRE 34 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTT-TCEEEEEESSH
T ss_pred EEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 78999 999999999999998 89999998753
No 343
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=58.72 E-value=5 Score=41.53 Aligned_cols=31 Identities=13% Similarity=0.201 Sum_probs=28.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|+|+|..|..+|..|.+. |. |+++|+.+
T Consensus 11 ~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~ 41 (234)
T 2aef_A 11 HVVICGWSESTLECLRELRGS-EV-FVLAEDEN 41 (234)
T ss_dssp EEEEESCCHHHHHHHHHSTTS-EE-EEEESCGG
T ss_pred EEEEECCChHHHHHHHHHHhC-Ce-EEEEECCH
Confidence 599999999999999999988 88 99999864
No 344
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=58.39 E-value=7.6 Score=44.83 Aligned_cols=52 Identities=19% Similarity=0.267 Sum_probs=38.8
Q ss_pred cCCcEEecCceEEEEEeccCCCCC-eEEEEEEEe--------------CCeEEEEEcCeEEEEcCCCcchH
Q psy4102 301 RKNLHIAMETQALRLLFDKSGPVP-KAVGIEILR--------------DGRKHIIRAKKEIISSAGAINSP 356 (1049)
Q Consensus 301 ~~nl~I~~~t~V~~Il~d~~~~~~-rv~GV~~~~--------------~g~~~~v~A~k~VILAAGa~~Tp 356 (1049)
+.|++|++++.+.+|.-+ +++ ++.+|++.+ +|+..++.++ .||+|+|--..+
T Consensus 269 ~~gv~~~~~~~~~~i~~~---~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d-~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 269 SRAWGLRFFRSPQQVLPS---PDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCG-LVLSSIGYKSRP 335 (460)
T ss_dssp SEEEEEECSEEEEEEEEC---TTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECS-EEEECCCEECCC
T ss_pred CceEEEECCCChheEEcC---CCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcC-EEEECCCCCCCC
Confidence 468999999999998754 225 788887753 3555678997 599999966554
No 345
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=58.37 E-value=7 Score=45.19 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|+|+|..|..+|.+|+.. |.+|++.|+.+
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~-GA~Viv~D~~~ 298 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQA-GARVIVTEIDP 298 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 489999999999999999998 89999998753
No 346
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=58.33 E-value=7.4 Score=42.75 Aligned_cols=34 Identities=38% Similarity=0.526 Sum_probs=30.5
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+.-+.|||+|..|+..|.+|+++ |.+|.++.+.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-GEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 35799999999999999999998 89999998853
No 347
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=58.17 E-value=7.5 Score=42.36 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.++|||+|..|+-+|..|++. + +|.++++.+
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~-~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTV-A-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhh-C-CEEEEECCC
Confidence 3799999999999999999998 6 699999874
No 348
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=58.15 E-value=7 Score=45.01 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||+|..|...|..|+++ |.+|++.|+.+
T Consensus 56 kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 87 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLA-GIETFLVVRNE 87 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECcH
Confidence 589999999999999999998 99999999875
No 349
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=58.04 E-value=5.9 Score=43.31 Aligned_cols=29 Identities=21% Similarity=0.423 Sum_probs=27.5
Q ss_pred EEEECCChhHHHHHHHHhcCCCCeEEEEcc
Q psy4102 93 FIVIGAGSAGAVVANRLSENPDWKILLIEA 122 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~~G~kVLVLEa 122 (1049)
+.|||+|..|...|..|++. |.+|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDN-GNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHH-CCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhC-CCeEEEEEc
Confidence 78999999999999999998 899999998
No 350
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=57.76 E-value=8.2 Score=42.51 Aligned_cols=34 Identities=26% Similarity=0.471 Sum_probs=29.8
Q ss_pred CccEEEECCChhHHHHHHHHhcCCC-CeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPD-WKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G-~kVLVLEaG~ 124 (1049)
..-|+|||+|..|+.+|..|+.. | .++.|++...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEecCCE
Confidence 35799999999999999999998 6 4788999875
No 351
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=57.50 E-value=8.1 Score=43.63 Aligned_cols=33 Identities=18% Similarity=0.165 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
--|+|||+|.+|..+|..|... |.+|++.++.+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRL-GAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 4699999999999999999887 89999999876
No 352
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=57.43 E-value=6.9 Score=44.80 Aligned_cols=35 Identities=14% Similarity=0.369 Sum_probs=26.6
Q ss_pred CCccEEEECCChhHH-HHHHHHhcCCCCeE-EEEccC
Q psy4102 89 RAYDFIVIGAGSAGA-VVANRLSENPDWKI-LLIEAG 123 (1049)
Q Consensus 89 ~~~DvIVVG~G~aG~-~aA~rLae~~G~kV-LVLEaG 123 (1049)
+..-+.|||.|..|. ..+..|.+.++.+| .|.++.
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~ 118 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGN 118 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSC
T ss_pred CceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCC
Confidence 457899999999996 78888877656664 466654
No 353
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=57.16 E-value=7.8 Score=42.07 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=28.2
Q ss_pred EEEECCChhHHHHHHHHhcCCCC--eEEEEccCC
Q psy4102 93 FIVIGAGSAGAVVANRLSENPDW--KILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~~G~--kVLVLEaG~ 124 (1049)
+.|||+|..|..+|..|+.. |. .|.++|...
T Consensus 3 I~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCH
Confidence 78999999999999999998 77 899999853
No 354
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=57.02 E-value=7.9 Score=42.22 Aligned_cols=32 Identities=22% Similarity=0.496 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
-+.|||+|..|..+|..|++. |. +|.++++.+
T Consensus 6 kI~VIGaG~~G~~ia~~la~~-g~~~V~l~D~~~ 38 (317)
T 2ewd_A 6 KIAVIGSGQIGGNIAYIVGKD-NLADVVLFDIAE 38 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCc
Confidence 589999999999999999998 77 999999864
No 355
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=56.76 E-value=7.7 Score=44.66 Aligned_cols=32 Identities=16% Similarity=0.238 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||.|.+|+++|..|.+. |.+|.+.|+..
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~-G~~V~~~D~~~ 42 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKL-GAIVTVNDGKP 42 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHT-TCEEEEEESSC
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCEEEEEeCCc
Confidence 599999999999999999998 99999999875
No 356
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=56.42 E-value=7.7 Score=44.68 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||.|..|+.+|..|++. |.+|+++++.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAEL-GANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhc-CCEEEEEECCH
Confidence 489999999999999999998 99999999864
No 357
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=56.34 E-value=8.5 Score=40.97 Aligned_cols=32 Identities=16% Similarity=0.442 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|+|+|.+|..+|..|++. |.+|.|+.|..
T Consensus 120 ~vlvlGaGGaaraia~~L~~~-G~~v~V~nRt~ 151 (269)
T 3phh_A 120 NALILGAGGSAKALACELKKQ-GLQVSVLNRSS 151 (269)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 599999999999999999998 69999998875
No 358
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=56.33 E-value=7.4 Score=44.62 Aligned_cols=31 Identities=26% Similarity=0.449 Sum_probs=28.6
Q ss_pred EEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+.|||+|..|+..|..|++. |.+|+++++.+
T Consensus 3 I~VIG~G~vG~~~A~~la~~-G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 78999999999999999998 89999998754
No 359
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=56.31 E-value=6.4 Score=46.53 Aligned_cols=32 Identities=13% Similarity=0.147 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||||..|+=.|.-++.- |.+|.|+++..
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~l-G~~VTii~~~~ 256 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSL-GYDVTVAVRSI 256 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-TCCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCeEEEecccc
Confidence 599999999999999999998 99999999753
No 360
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=56.29 E-value=12 Score=36.57 Aligned_cols=61 Identities=13% Similarity=0.070 Sum_probs=41.3
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCcchHHHHHhCCC
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGI 364 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~~Tp~LLl~SGI 364 (1049)
...++....++.|++++++ +|+++..++ ++ ..|+. .+| ++.++ .||+|+|.. |.++...|+
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~---~~--~~v~~-~~g---~i~ad-~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMG---GV--FEVET-EEG---VEKAE-RLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECS---SS--EEEEC-SSC---EEEEE-EEEECCTTC--CHHHHHHTC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcC---CE--EEEEE-CCC---EEEEC-EEEECCCCC--CCccccCCC
Confidence 3445556667789999999 999998762 22 22332 244 58886 599999975 456666665
No 361
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=56.19 E-value=8.8 Score=41.42 Aligned_cols=31 Identities=26% Similarity=0.449 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+-|||+|..|...|..|+ + |.+|.+.++.+
T Consensus 14 ~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 14 KVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 5889999999999999999 8 99999999864
No 362
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=56.16 E-value=8.5 Score=44.58 Aligned_cols=34 Identities=24% Similarity=0.382 Sum_probs=31.1
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccCCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAGGD 125 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~~ 125 (1049)
.+.|||+|..|+.+|..|++++|. +|+++++.+.
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 599999999999999999997689 9999998763
No 363
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=56.08 E-value=6.7 Score=43.17 Aligned_cols=33 Identities=15% Similarity=0.276 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
.-+.|||+|..|..+|..|++. |. +|.|+|.-.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCh
Confidence 3699999999999999999997 76 899999864
No 364
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=55.95 E-value=17 Score=41.43 Aligned_cols=34 Identities=24% Similarity=0.440 Sum_probs=29.5
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCC---eEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDW---KILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~---kVLVLEaG~ 124 (1049)
+--+||.|+|.||+.+|..|.+. |. +|.++++-+
T Consensus 219 d~riV~~GAGaAGigia~ll~~~-G~~~~~i~l~D~~G 255 (487)
T 3nv9_A 219 ECRMVFIGAGSSNTTCLRLIVTA-GADPKKIVMFDSKG 255 (487)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT-TCCGGGEEEEETTE
T ss_pred hcEEEEECCCHHHHHHHHHHHHc-CCCcccEEEEeccc
Confidence 34699999999999999999887 75 899999865
No 365
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=55.78 E-value=8.4 Score=42.34 Aligned_cols=32 Identities=25% Similarity=0.467 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
-+.|||+|..|..+|..|+.. |. +|.++|...
T Consensus 16 kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCH
Confidence 599999999999999999998 77 999999864
No 366
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=55.42 E-value=8.6 Score=41.27 Aligned_cols=30 Identities=27% Similarity=0.553 Sum_probs=27.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
-++|+|+|.+|..+|..|++. | +|.+..+.
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~-G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKD-N-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSS-S-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-C-CEEEEECC
Confidence 499999999999999999998 8 99999775
No 367
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=55.41 E-value=8.7 Score=39.26 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
--+.|||+|..|...|..|++. |.+|.++++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~-g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS-GFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 3599999999999999999998 88999998764
No 368
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=55.24 E-value=7.9 Score=43.75 Aligned_cols=30 Identities=10% Similarity=0.241 Sum_probs=27.0
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEc
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIE 121 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLE 121 (1049)
.+.|||+|..|+..|..|++..|.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 488999999999999999983389999998
No 369
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=55.07 E-value=8.5 Score=43.02 Aligned_cols=33 Identities=12% Similarity=0.300 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
--++|+|+|..|..+|..|... |.+|+++++.+
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM-GAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 3599999999999999999988 88999999864
No 370
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=55.02 E-value=9.3 Score=44.06 Aligned_cols=32 Identities=9% Similarity=0.153 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
.|+|||+|..|+-+|..|.+. |. +|.++++.+
T Consensus 266 ~VvVIGgG~~a~d~A~~~~r~-Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 266 HVVVLGGGDTAMDCVRTAIRQ-GATSVKCLYRRD 298 (456)
T ss_dssp EEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred EEEEECCChhHHHHHHHHHHc-CCCEEEEEEeCC
Confidence 699999999999999999888 65 699999986
No 371
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=54.75 E-value=7.2 Score=43.39 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||+|..|...|..|+++ |.+|.++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 599999999999999999998 89999998764
No 372
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=54.54 E-value=8.8 Score=42.75 Aligned_cols=33 Identities=12% Similarity=0.220 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
--++|+|+|.+|..+|..|... |.+|.++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 3699999999999999999988 78999999864
No 373
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=54.37 E-value=10 Score=41.21 Aligned_cols=32 Identities=38% Similarity=0.563 Sum_probs=28.4
Q ss_pred EEEECCChhHHHHHHHHhcC-CCCeEEEEccCC
Q psy4102 93 FIVIGAGSAGAVVANRLSEN-PDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~-~G~kVLVLEaG~ 124 (1049)
+.|||+|..|..+|..|++. -+.+|.++|+.+
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 78999999999999999985 268999999864
No 374
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=54.26 E-value=9.6 Score=39.80 Aligned_cols=33 Identities=18% Similarity=0.356 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
--+.|||+|..|..+|..|++. |.+|.+.++.+
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~-G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADL-GHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 4689999999999999999998 89999998864
No 375
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=53.75 E-value=7.2 Score=41.57 Aligned_cols=32 Identities=25% Similarity=0.277 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|+|+|.+|..+|..|++. |.+|.|..|..
T Consensus 121 ~vlvlGaGg~g~a~a~~L~~~-G~~v~v~~R~~ 152 (272)
T 1p77_A 121 HVLILGAGGATKGVLLPLLQA-QQNIVLANRTF 152 (272)
T ss_dssp EEEEECCSHHHHTTHHHHHHT-TCEEEEEESSH
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 599999999999999999998 79999998764
No 376
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=53.61 E-value=11 Score=40.62 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.+.|||.|..|...|..|++. |.+|.+.++.+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-TTCEEEECSST
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4699999999999999999998 89999999875
No 377
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=53.47 E-value=10 Score=40.94 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
.++|+|+|.+|..+|..|++. |. +|.|..|..
T Consensus 143 ~vlVlGaGg~g~aia~~L~~~-G~~~V~v~nR~~ 175 (297)
T 2egg_A 143 RILVIGAGGGARGIYFSLLST-AAERIDMANRTV 175 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCSEEEEECSSH
T ss_pred EEEEECcHHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 599999999999999999998 76 999998753
No 378
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=53.18 E-value=7 Score=44.83 Aligned_cols=32 Identities=13% Similarity=0.237 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||.|.+|+++|..|++. |.+|.+.|...
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~-G~~v~~~D~~~ 38 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLAR-GVTPRVMDTRM 38 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTT-TCCCEEEESSS
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCEEEEEECCC
Confidence 389999999999999888888 99999999865
No 379
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=52.30 E-value=10 Score=42.99 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
--|+|||+|.+|+.+|..|... |.+|+++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 3699999999999999998887 88999999864
No 380
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=52.24 E-value=10 Score=40.54 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=28.3
Q ss_pred cEEEEC-CChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 92 DFIVIG-AGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 92 DvIVVG-~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
-++|+| +|.+|..+|..|++. |.+|.++.+.
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~ 152 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRK 152 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEECCCcHHHHHHHHHHHHC-cCEEEEEECC
Confidence 589999 999999999999998 8899999875
No 381
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=51.97 E-value=8.5 Score=43.07 Aligned_cols=33 Identities=18% Similarity=0.115 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
--++|||+|.+|..+|..|... |.+|+++++.+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRL-GAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999999887 89999999875
No 382
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=51.91 E-value=8.2 Score=40.60 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=28.2
Q ss_pred cEEEECC-C-hhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGA-G-SAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~-G-~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
=++|.|+ | ..|..+|.+|+++ |.+|+++.+..
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~ 57 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLE-GADVVISDYHE 57 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCH
Confidence 3899998 7 5999999999999 99999998764
No 383
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=51.90 E-value=8.6 Score=47.27 Aligned_cols=32 Identities=6% Similarity=0.198 Sum_probs=30.0
Q ss_pred cEEEEC--CChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIG--AGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG--~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.|+||| +|..|+-+|..|++. |.+|.|+|+++
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~-G~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATA-GHEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHc-CCEEEEEeccc
Confidence 699998 999999999999998 89999999986
No 384
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=51.85 E-value=12 Score=37.68 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=28.3
Q ss_pred EEEECC-ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGA-GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~-G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
++|.|| |..|..++.+|+++ |.+|.++.|.+
T Consensus 3 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNR-GHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCc
Confidence 789995 99999999999998 89999999864
No 385
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=51.80 E-value=11 Score=41.19 Aligned_cols=31 Identities=16% Similarity=0.306 Sum_probs=28.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG 123 (1049)
-++|+|+|.+|.++|..|++. |. +|.|+.|.
T Consensus 156 ~~lVlGaGG~g~aia~~L~~~-Ga~~V~i~nR~ 187 (315)
T 3tnl_A 156 KMTICGAGGAATAICIQAALD-GVKEISIFNRK 187 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred EEEEECCChHHHHHHHHHHHC-CCCEEEEEECC
Confidence 599999999999999999998 76 89999886
No 386
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=51.79 E-value=18 Score=42.17 Aligned_cols=33 Identities=27% Similarity=0.577 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhc---CCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSE---NPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae---~~G~kVLVLEaG~ 124 (1049)
+||||||||++|+++|..|++ . |.+|+|||+.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~-G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDD-RIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGG-GSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCC-CCEEEEEecCC
Confidence 799999999999999999999 7 99999999975
No 387
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=51.78 E-value=12 Score=39.47 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
.-|+|||+|..|+.+|..|+.. |. ++.|++...
T Consensus 29 ~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 4799999999999999999998 65 889998764
No 388
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=51.61 E-value=11 Score=40.42 Aligned_cols=32 Identities=25% Similarity=0.409 Sum_probs=28.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
-++|+|+|.+|..+|..|++. |. +|.|+.|..
T Consensus 129 ~vlVlGaGG~g~aia~~L~~~-G~~~v~i~~R~~ 161 (283)
T 3jyo_A 129 SVVQVGAGGVGNAVAYALVTH-GVQKLQVADLDT 161 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCCEEEEEECCH
Confidence 599999999999999999998 76 799997753
No 389
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=51.60 E-value=12 Score=40.47 Aligned_cols=32 Identities=19% Similarity=0.499 Sum_probs=29.1
Q ss_pred cEEEEC-CChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIG-AGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG-~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.||| .|..|.++|..|++. |.+|.++++.+
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~-G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRAS-GYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhC-CCeEEEEECCc
Confidence 599999 999999999999998 89999998754
No 390
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=51.08 E-value=13 Score=40.28 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.+.|||.|..|...|..|++. |.+|.+.++.+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN-GFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4699999999999999999998 89999998864
No 391
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=51.08 E-value=11 Score=40.27 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||.|..|...|..|++. |.+|.+.++.+
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 478999999999999999998 89999998865
No 392
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=50.92 E-value=10 Score=44.10 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||+|..|...|..|+++ |.+|.+.|+.+
T Consensus 7 kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASH-GHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 489999999999999999998 99999999864
No 393
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=50.88 E-value=11 Score=39.82 Aligned_cols=32 Identities=19% Similarity=0.417 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|.|+|..|..++.+|.++ |.+|.++.+..
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 36 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQ-GHEVTGLRRSA 36 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECTT
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 389999999999999999998 89999998875
No 394
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=50.76 E-value=11 Score=40.59 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.+.|||.|..|...|..|++. |.+|.+.++.+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-GLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 3699999999999999999998 99999998764
No 395
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=50.69 E-value=11 Score=41.14 Aligned_cols=32 Identities=19% Similarity=0.502 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
-+.|||+|..|..+|..|+.. |. +|.|+|.-.
T Consensus 6 kI~VIGaG~vG~~ia~~la~~-g~~~v~L~Di~~ 38 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQK-NLGDVVLFDIVK 38 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCH
Confidence 599999999999999999998 76 899999754
No 396
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=50.53 E-value=9.4 Score=41.72 Aligned_cols=31 Identities=23% Similarity=0.428 Sum_probs=28.1
Q ss_pred EEEECCChhHHHHHHHHhcCCCC--eEEEEccCC
Q psy4102 93 FIVIGAGSAGAVVANRLSENPDW--KILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~~G~--kVLVLEaG~ 124 (1049)
+.|||+|..|..+|..|++. |. +|.++++.+
T Consensus 3 I~VIGaG~~G~~la~~l~~~-g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMK-GFAREMVLIDVDK 35 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCCh
Confidence 78999999999999999997 77 999999863
No 397
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=50.43 E-value=12 Score=37.82 Aligned_cols=31 Identities=23% Similarity=0.432 Sum_probs=28.5
Q ss_pred EEEECC-ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGA-GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~-G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
++|.|+ |..|..+|.+|+++ |.+|.++.|.+
T Consensus 3 ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRR-GHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 789998 99999999999998 89999998864
No 398
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=50.18 E-value=11 Score=42.14 Aligned_cols=33 Identities=27% Similarity=0.332 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
--++|||+|..|..+|..|... |.+|++.++.+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGM-GATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 3699999999999999999887 88999999764
No 399
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=49.89 E-value=16 Score=43.16 Aligned_cols=54 Identities=17% Similarity=0.250 Sum_probs=39.6
Q ss_pred hHHchHHhhhcC-CcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCC
Q psy4102 291 SKAFLRPIRLRK-NLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGA 352 (1049)
Q Consensus 291 ~~~~L~~~~~~~-nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa 352 (1049)
...+|...+++. |++|+.+ +|++|..+ +++++++|... +|+ ++.|+ .||+|+|+
T Consensus 196 l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~---~~g~~~~v~~~-~G~--~i~ad-~vI~A~G~ 250 (550)
T 2e4g_A 196 VADFLRRFATEKLGVRHVED-RVEHVQRD---ANGNIESVRTA-TGR--VFDAD-LFVDCSGF 250 (550)
T ss_dssp HHHHHHHHHHHHSCCEEEEC-CEEEEEEC---TTSCEEEEEET-TSC--EEECS-EEEECCGG
T ss_pred HHHHHHHHHHhcCCcEEEEC-eEeEEEEc---CCCCEEEEEEC-CCC--EEECC-EEEECCCC
Confidence 344555555555 9999999 99999876 24677788763 453 58897 59999996
No 400
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=49.86 E-value=12 Score=41.97 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.|+|+|+|.+|+.+|..|... |.+|++.++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999998887 88999999865
No 401
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=49.79 E-value=12 Score=39.63 Aligned_cols=31 Identities=23% Similarity=0.303 Sum_probs=28.2
Q ss_pred EEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+.|||+|..|...|..|++. |.+|.++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 33 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRR-GHYLIGVSRQQ 33 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEcCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 78999999999999999998 88999998754
No 402
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=49.69 E-value=9.9 Score=41.25 Aligned_cols=32 Identities=31% Similarity=0.442 Sum_probs=28.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCC--CeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPD--WKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G--~kVLVLEaG~ 124 (1049)
-+.|||+|..|..+|..|++. | .+|.++++..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~-g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQ-GVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEcCCH
Confidence 378999999999999999997 7 6899999863
No 403
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=49.57 E-value=13 Score=36.96 Aligned_cols=32 Identities=13% Similarity=0.372 Sum_probs=29.0
Q ss_pred cEEEECC-ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGA-GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~-G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|+|+ |..|..++.+|.++ |.+|.++.+.+
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCh
Confidence 3899998 99999999999998 89999998864
No 404
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=49.57 E-value=12 Score=39.59 Aligned_cols=32 Identities=19% Similarity=0.462 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|.|+|..|..++.+|.++ |.+|.++.|.+
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQ-GWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGG-TCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHC-CCEEEEEEcCh
Confidence 499999999999999999998 89999998864
No 405
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=49.42 E-value=12 Score=38.25 Aligned_cols=32 Identities=16% Similarity=0.309 Sum_probs=29.3
Q ss_pred cEEEECC-ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGA-GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~-G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|.|+ |..|..+|.+|++. |.+|.++.|.+
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~ 55 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNK-GHEPVAMVRNE 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred eEEEECCCChHHHHHHHHHHhC-CCeEEEEECCh
Confidence 5899998 99999999999998 99999999864
No 406
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=48.96 E-value=13 Score=40.62 Aligned_cols=31 Identities=32% Similarity=0.518 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG 123 (1049)
-+.|||+|..|..+|..|+.. |. .|.++|.-
T Consensus 10 kv~ViGaG~vG~~ia~~l~~~-g~~~v~l~D~~ 41 (315)
T 3tl2_A 10 KVSVIGAGFTGATTAFLLAQK-ELADVVLVDIP 41 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECCG
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEecc
Confidence 599999999999999999998 78 99999986
No 407
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=48.72 E-value=14 Score=42.43 Aligned_cols=49 Identities=18% Similarity=0.257 Sum_probs=36.1
Q ss_pred CCcEEecCceEEEEEeccCCCCCeEEEEEEEe---------------CCeEEEEEcCeEEEEcCCCcchH
Q psy4102 302 KNLHIAMETQALRLLFDKSGPVPKAVGIEILR---------------DGRKHIIRAKKEIISSAGAINSP 356 (1049)
Q Consensus 302 ~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~---------------~g~~~~v~A~k~VILAAGa~~Tp 356 (1049)
.|++|++++.+.+|.-+ +++.+|++.+ +|+..++.++ .||+|.|--.++
T Consensus 265 ~gv~i~~~~~~~~i~~~-----~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d-~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK-----RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQ-LVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS-----SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECS-EEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC-----CcEeEEEEEEEEecCCCcccccccCCCceEEEEcC-EEEEccccccCC
Confidence 58999999999998643 4566776642 3455678997 699999976555
No 408
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=48.58 E-value=12 Score=40.19 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||.|..|...|..|++. |.+|.+.++.+
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 489999999999999999998 89999998864
No 409
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=48.55 E-value=14 Score=43.75 Aligned_cols=34 Identities=26% Similarity=0.461 Sum_probs=29.7
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
..-|+|||+|..|+.+|..|+.. |. ++.|+|...
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a-GVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 35799999999999999999998 65 899999764
No 410
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=48.52 E-value=14 Score=42.35 Aligned_cols=34 Identities=18% Similarity=0.364 Sum_probs=31.2
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
...+-|||.|..|+..|..|+++ |.+|+++++.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45689999999999999999999 99999999875
No 411
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=48.51 E-value=12 Score=44.22 Aligned_cols=34 Identities=24% Similarity=0.339 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
-.+||||+|-.|..+|..|.+. |.+|+++|+.+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEECChH
Confidence 4699999999999999999998 999999998864
No 412
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=48.03 E-value=9.3 Score=42.69 Aligned_cols=32 Identities=9% Similarity=0.241 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCC-------CeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPD-------WKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G-------~kVLVLEaG~ 124 (1049)
-+.|||+|..|...|..|+++ | .+|.++++.+
T Consensus 23 kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSC
T ss_pred EEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECCh
Confidence 499999999999999999998 7 8999999875
No 413
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=48.01 E-value=14 Score=40.22 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhcCCC-CeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPD-WKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G-~kVLVLEaG~ 124 (1049)
.+.|||.|..|..+|..|++. | .+|.+.++.+
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~-G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGR-NAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 599999999999999999998 8 9999999874
No 414
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=47.99 E-value=12 Score=40.45 Aligned_cols=34 Identities=26% Similarity=0.512 Sum_probs=29.8
Q ss_pred CccEEEECCChhHHHHHHHHhcCCC-CeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPD-WKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G-~kVLVLEaG~ 124 (1049)
..-|+|||+|..|+.+|..|+.. | .++.|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 45799999999999999999998 5 4899998764
No 415
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=47.81 E-value=14 Score=43.88 Aligned_cols=34 Identities=26% Similarity=0.461 Sum_probs=29.9
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
..-|+|||+|..|+.+|..|+.. |. ++.|++...
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~a-GVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCC
Confidence 35799999999999999999998 64 899999775
No 416
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=47.79 E-value=12 Score=40.04 Aligned_cols=32 Identities=22% Similarity=0.273 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
-++|+|+|.+|..+|..|++. |. +|.|..|..
T Consensus 119 ~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 151 (277)
T 3don_A 119 YILILGAGGASKGIANELYKI-VRPTLTVANRTM 151 (277)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-CCSCCEEECSCG
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 599999999999999999998 76 899998764
No 417
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=47.72 E-value=13 Score=40.41 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.+.|||+|..|...|..|++. |.+|.+.++.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-GHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 3599999999999999999998 89999998764
No 418
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=47.71 E-value=13 Score=40.55 Aligned_cols=33 Identities=24% Similarity=0.404 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.+.|||.|..|...|..|++. |.+|.+.++.+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-GYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 3699999999999999999998 99999998764
No 419
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=47.51 E-value=8.9 Score=42.33 Aligned_cols=32 Identities=16% Similarity=0.299 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCC-------CeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPD-------WKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G-------~kVLVLEaG~ 124 (1049)
-+.|||+|..|...|..|+++ | .+|.++++.+
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCC
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcCh
Confidence 599999999999999999998 7 8999999875
No 420
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=47.46 E-value=12 Score=39.37 Aligned_cols=31 Identities=26% Similarity=0.534 Sum_probs=28.2
Q ss_pred EEEECCChhHHHHHHHHhcCCC-CeEEEEccCC
Q psy4102 93 FIVIGAGSAGAVVANRLSENPD-WKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~~G-~kVLVLEaG~ 124 (1049)
+.|||+|..|...|..|++. | .+|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~r~~ 34 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRGA 34 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHH-CSCEEEEECSSH
T ss_pred EEEECchHHHHHHHHHHHHC-CCCeEEEECCCH
Confidence 78999999999999999998 8 8999998764
No 421
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=47.29 E-value=15 Score=37.85 Aligned_cols=31 Identities=19% Similarity=0.403 Sum_probs=27.9
Q ss_pred EEEECC-ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGA-GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~-G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
++|.|+ |..|..+|.+|+++ |.+|+++.+..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARA-GHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCh
Confidence 788887 89999999999998 89999998864
No 422
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=47.28 E-value=14 Score=41.21 Aligned_cols=31 Identities=16% Similarity=0.355 Sum_probs=28.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
-++|+|.|..|..+|.+|.+. |.+|++.+..
T Consensus 175 tV~V~G~G~VG~~~A~~L~~~-GakVvv~D~~ 205 (364)
T 1leh_A 175 AVSVQGLGNVAKALCKKLNTE-GAKLVVTDVN 205 (364)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEECchHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 499999999999999999998 8999998853
No 423
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=47.17 E-value=13 Score=42.86 Aligned_cols=31 Identities=19% Similarity=0.293 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
-++|||+|..|...|..|.+. |.+|.|++..
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~-ga~V~vi~~~ 44 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEA-GARLTVNALT 44 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TBEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhC-cCEEEEEcCC
Confidence 599999999999999999998 9999999964
No 424
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=47.14 E-value=14 Score=39.63 Aligned_cols=32 Identities=25% Similarity=0.344 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
.++|+|+|.+|..+|..|++. |. +|.|+-|-.
T Consensus 124 ~vlvlGaGGaaraia~~L~~~-G~~~v~v~nRt~ 156 (282)
T 3fbt_A 124 ICVVLGSGGAARAVLQYLKDN-FAKDIYVVTRNP 156 (282)
T ss_dssp EEEEECSSTTHHHHHHHHHHT-TCSEEEEEESCH
T ss_pred EEEEECCcHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 699999999999999999998 76 899998753
No 425
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=46.97 E-value=14 Score=38.91 Aligned_cols=32 Identities=25% Similarity=0.317 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
-++|||+|.+|..+|..|++. |. +|.|..|-.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-GVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 699999999999999999998 76 899998864
No 426
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=46.97 E-value=15 Score=39.19 Aligned_cols=32 Identities=13% Similarity=0.171 Sum_probs=28.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCC-CeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPD-WKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G-~kVLVLEaG~ 124 (1049)
-++|+|+|.+|..+|..|++. | .+|.|+.|-.
T Consensus 122 ~~lvlGaGg~~~aia~~L~~~-G~~~v~i~~R~~ 154 (272)
T 3pwz_A 122 RVLLLGAGGAVRGALLPFLQA-GPSELVIANRDM 154 (272)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-CCSEEEEECSCH
T ss_pred EEEEECccHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 599999999999999999998 7 5999998753
No 427
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=46.93 E-value=16 Score=41.99 Aligned_cols=51 Identities=12% Similarity=0.016 Sum_probs=34.8
Q ss_pred cCCcEEecCceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEcCeEEEEcCCCcchHHHH
Q psy4102 301 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLL 359 (1049)
Q Consensus 301 ~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~--~g~~~~v~A~k~VILAAGa~~Tp~LL 359 (1049)
..+.+|+++++|++|..+ +++ +.|.+.. +| .+++|+ .||+|++.....+||
T Consensus 247 ~lg~~i~~~~~V~~i~~~----~~~-~~v~~~~~~~g--~~~~ad-~vV~a~~~~~~~~ll 299 (478)
T 2ivd_A 247 SLGDAAHVGARVEGLARE----DGG-WRLIIEEHGRR--AELSVA-QVVLAAPAHATAKLL 299 (478)
T ss_dssp HHGGGEESSEEEEEEECC------C-CEEEEEETTEE--EEEECS-EEEECSCHHHHHHHH
T ss_pred HhhhhEEcCCEEEEEEec----CCe-EEEEEeecCCC--ceEEcC-EEEECCCHHHHHHHh
Confidence 336789999999999876 233 4555532 23 358897 599999976666655
No 428
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=46.87 E-value=11 Score=42.88 Aligned_cols=32 Identities=16% Similarity=0.298 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..-|||.|..|+..|..|+++ |.+|+++++.+
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~ 44 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQ 44 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred ccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 478999999999999999999 99999999874
No 429
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=46.86 E-value=14 Score=39.65 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||.|..|..+|.+|... |.+|++.++..
T Consensus 157 ~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~ 188 (293)
T 3d4o_A 157 NVAVLGLGRVGMSVARKFAAL-GAKVKVGARES 188 (293)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 599999999999999999988 88999999864
No 430
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=46.65 E-value=16 Score=39.18 Aligned_cols=32 Identities=25% Similarity=0.286 Sum_probs=28.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCC-CeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPD-WKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G-~kVLVLEaG~ 124 (1049)
-++|+|+|.+|..+|..|++. | .+|.|..|..
T Consensus 128 ~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 160 (281)
T 3o8q_A 128 TILLIGAGGAARGVLKPLLDQ-QPASITVTNRTF 160 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-CCSEEEEEESSH
T ss_pred EEEEECchHHHHHHHHHHHhc-CCCeEEEEECCH
Confidence 589999999999999999998 7 4999998753
No 431
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=46.51 E-value=14 Score=39.11 Aligned_cols=31 Identities=23% Similarity=0.428 Sum_probs=27.8
Q ss_pred EEEECCChhHHHHHHHHhcCCCC--eEEEEccCC
Q psy4102 93 FIVIGAGSAGAVVANRLSENPDW--KILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~~G~--kVLVLEaG~ 124 (1049)
+.|||+|..|...|..|++. |. +|++.++.+
T Consensus 4 I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 36 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred EEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCCH
Confidence 78999999999999999997 77 899998753
No 432
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=46.44 E-value=8.5 Score=39.47 Aligned_cols=33 Identities=24% Similarity=0.519 Sum_probs=29.0
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEE-EccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILL-IEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLV-LEaG~ 124 (1049)
.-+.|||+|..|..+|..|++. |.+|.+ .++.+
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-QIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-TCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCCH
Confidence 3699999999999999999998 889988 77654
No 433
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=46.24 E-value=12 Score=39.78 Aligned_cols=32 Identities=28% Similarity=0.414 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++|||+|.+|..+|..|++. |.+|.+.++..
T Consensus 131 ~v~iiGaG~~g~aia~~L~~~-g~~V~v~~r~~ 162 (275)
T 2hk9_A 131 SILVLGAGGASRAVIYALVKE-GAKVFLWNRTK 162 (275)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 599999999999999999998 77999998763
No 434
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=46.21 E-value=15 Score=40.00 Aligned_cols=31 Identities=19% Similarity=0.403 Sum_probs=28.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG 123 (1049)
-++|+|+|.+|.++|..|++. |. +|.|+-|.
T Consensus 150 ~~lVlGAGGaaraia~~L~~~-G~~~v~v~nRt 181 (312)
T 3t4e_A 150 TMVLLGAGGAATAIGAQAAIE-GIKEIKLFNRK 181 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHHc-CCCEEEEEECC
Confidence 599999999999999999998 76 89999886
No 435
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=45.93 E-value=15 Score=39.62 Aligned_cols=32 Identities=16% Similarity=0.275 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||.|..|..+|.+|... |.+|++.++..
T Consensus 159 ~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~ 190 (300)
T 2rir_A 159 QVAVLGLGRTGMTIARTFAAL-GANVKVGARSS 190 (300)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred EEEEEcccHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 599999999999999999987 89999999764
No 436
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=45.65 E-value=11 Score=40.22 Aligned_cols=32 Identities=16% Similarity=0.319 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||.|..|...|..|++. |.+|.+.++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA-GFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-TCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 478999999999999999998 89999998865
No 437
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=45.64 E-value=15 Score=39.43 Aligned_cols=32 Identities=16% Similarity=0.319 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||+|..|...|..|++. |.+|.+.++.+
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 589999999999999999998 89999998764
No 438
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=45.28 E-value=15 Score=39.08 Aligned_cols=32 Identities=22% Similarity=0.477 Sum_probs=29.2
Q ss_pred cEEEECC-ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGA-GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~-G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||+ |..|..+|..|++. |.+|.+.++.+
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDS-AHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 5999999 99999999999998 89999998753
No 439
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=45.27 E-value=15 Score=39.20 Aligned_cols=31 Identities=19% Similarity=0.365 Sum_probs=28.4
Q ss_pred EEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+.|||.|..|...|..|++. |.+|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 33 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKH-GYPLIIYDVFP 33 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHT-TCCEEEECSST
T ss_pred EEEEeccHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 78999999999999999998 89999998764
No 440
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=45.21 E-value=25 Score=40.92 Aligned_cols=33 Identities=30% Similarity=0.422 Sum_probs=28.6
Q ss_pred ccEEEECCChhHHHHHHHHhc----CCC-------CeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSE----NPD-------WKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae----~~G-------~kVLVLEaG~ 124 (1049)
--+||.|+|.||+.+|..|.. . | .++.++++-+
T Consensus 285 ~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~i~~~D~~G 328 (564)
T 1pj3_A 285 HKILFLGAGEAALGIANLIVMSMVEN-GLSEQEAQKKIWMFDKYG 328 (564)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHHHHT-TCCHHHHHHTEEEEETTE
T ss_pred cEEEEeCCCHHHHHHHHHHHHHHHHc-CCChHHhhCcEEEEeCCC
Confidence 469999999999999999985 5 6 5899999865
No 441
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=45.14 E-value=16 Score=39.88 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=28.1
Q ss_pred cEEEECCChhHHH-HHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAV-VANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~-aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||.|.+|++ +|..|.+. |.+|.+.|+..
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~-G~~V~~~D~~~ 38 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEA-GFEVSGCDAKM 38 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred EEEEEEECHHHHHHHHHHHHhC-CCEEEEEcCCC
Confidence 4899999999996 77777888 99999999875
No 442
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=44.95 E-value=16 Score=39.75 Aligned_cols=32 Identities=28% Similarity=0.503 Sum_probs=28.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
-+.|||+|..|..+|..|+.. |. +|.++|.-.
T Consensus 4 kI~VIGaG~vG~~~a~~la~~-g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAK-ELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 489999999999999999998 65 899999753
No 443
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=44.88 E-value=18 Score=38.20 Aligned_cols=31 Identities=10% Similarity=0.050 Sum_probs=27.9
Q ss_pred EEEECC---ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGA---GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~---G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
++|.|+ |..|..+|.+|++. |.+|+++.+..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 899997 68999999999998 99999998764
No 444
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=44.76 E-value=14 Score=42.57 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|+|+|.+|..+|..|++.++.+|.|+.|..
T Consensus 25 ~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~ 57 (467)
T 2axq_A 25 NVLLLGSGFVAQPVIDTLAANDDINVTVACRTL 57 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHTSTTEEEEEEESSH
T ss_pred EEEEECChHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 499999999999999999997678999998753
No 445
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=44.64 E-value=16 Score=39.78 Aligned_cols=32 Identities=22% Similarity=0.438 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC--eEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW--KILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~--kVLVLEaG~ 124 (1049)
-+.|||.|..|...|..|++. |. +|.+.++.+
T Consensus 35 kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 68 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCH
Confidence 599999999999999999998 88 999998864
No 446
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=44.51 E-value=26 Score=40.97 Aligned_cols=34 Identities=24% Similarity=0.486 Sum_probs=28.9
Q ss_pred CccEEEECCChhHHHHHHHHhc----CCC-------CeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSE----NPD-------WKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae----~~G-------~kVLVLEaG~ 124 (1049)
+--+||.|+|.||+.+|..|.. . | .++.++++-+
T Consensus 320 d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~i~~vD~~G 364 (605)
T 1o0s_A 320 QEKYLFFGAGAASTGIAEMIVHQMQNE-GISKEEACNRIYLMDIDG 364 (605)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHHHTT-TCCHHHHHHTEEEEETTE
T ss_pred hcEEEEECCCHHHHHHHHHHHHHHHHc-CCChhhhhCeEEEEECCC
Confidence 3469999999999999999987 5 6 4799999865
No 447
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=44.39 E-value=17 Score=39.00 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.+.|||+|..|...|..|++. |.+|.+.++.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-GVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 3589999999999999999998 89999998754
No 448
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=44.22 E-value=17 Score=36.65 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=28.4
Q ss_pred EEEEC-CChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIG-AGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG-~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
++|.| +|..|..++.+|+++ |.+|.++.|.+
T Consensus 3 ilItGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTT-DYQIYAGARKV 34 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTS-SCEEEEEESSG
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEECCc
Confidence 78999 799999999999998 89999999875
No 449
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=44.19 E-value=10 Score=40.88 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=27.8
Q ss_pred cEEEECCChhHHHHHHHHhcCC----C-CeEEEEcc
Q psy4102 92 DFIVIGAGSAGAVVANRLSENP----D-WKILLIEA 122 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~----G-~kVLVLEa 122 (1049)
.+.|||+|..|...|..|++.+ | .+|.++++
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 6999999999999999999852 6 89999987
No 450
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=44.09 E-value=15 Score=45.01 Aligned_cols=32 Identities=25% Similarity=0.467 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+-|||+|..|..+|..|+++ |.+|++.++.+
T Consensus 314 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILS-NYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhC-CCEEEEEECCH
Confidence 499999999999999999998 99999999864
No 451
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=44.02 E-value=13 Score=43.86 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
.++|||+|..|+-+|..|++. +.+|.++++.+.
T Consensus 188 ~V~VIG~G~sg~e~a~~l~~~-~~~vtv~~r~~~ 220 (542)
T 1w4x_A 188 RVGVIGTGSSGIQVSPQIAKQ-AAELFVFQRTPH 220 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCC
T ss_pred EEEEECCCccHHHHHHHHhhc-CceEEEEEcCCc
Confidence 589999999999999999998 899999999864
No 452
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=43.96 E-value=15 Score=42.01 Aligned_cols=29 Identities=28% Similarity=0.469 Sum_probs=27.0
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC---eEEEEc
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW---KILLIE 121 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~---kVLVLE 121 (1049)
-++|+|+|.||..+|..|.+. |. +|.|++
T Consensus 188 rvlvlGAGgAg~aia~~L~~~-G~~~~~I~vvd 219 (439)
T 2dvm_A 188 TLALFGAGAAGFATLRILTEA-GVKPENVRVVE 219 (439)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCGGGEEEEE
T ss_pred EEEEECccHHHHHHHHHHHHc-CCCcCeEEEEE
Confidence 599999999999999999998 75 899999
No 453
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=43.81 E-value=34 Score=37.39 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=28.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|+|+|..|+.++..|+...|.+|+.++..+
T Consensus 166 ~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~ 198 (348)
T 4eez_A 166 WQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQ 198 (348)
T ss_dssp EEEEECCSHHHHHHHHHHHHTSCCEEEEEESCH
T ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEEECcH
Confidence 489999999999998888776689999998764
No 454
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=43.77 E-value=15 Score=40.80 Aligned_cols=34 Identities=24% Similarity=0.455 Sum_probs=29.6
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
.--|+|||+|..|+.+|..|+.. |. ++.|++...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEECCCc
Confidence 35699999999999999999998 64 899999764
No 455
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=43.43 E-value=18 Score=36.53 Aligned_cols=31 Identities=23% Similarity=0.291 Sum_probs=27.7
Q ss_pred EEEEC-CChhHHHHHHHHh-cCCCCeEEEEccCC
Q psy4102 93 FIVIG-AGSAGAVVANRLS-ENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG-~G~aG~~aA~rLa-e~~G~kVLVLEaG~ 124 (1049)
++|.| +|..|..+|.+|+ +. |.+|.++.+.+
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYT-DMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHC-CCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcC-CceEEEEecCc
Confidence 89999 4999999999999 66 99999998864
No 456
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=43.33 E-value=14 Score=42.35 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 90 AYDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 90 ~~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
...+.|||.|-.|+.+|..||+. |.+|+.+|-.+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~-G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL-GHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 45799999999999999999998 99999998753
No 457
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=43.04 E-value=17 Score=41.06 Aligned_cols=30 Identities=20% Similarity=0.258 Sum_probs=27.3
Q ss_pred EEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+.|||.|..|+..|..|++ |.+|.++++.+
T Consensus 3 I~VIG~G~vG~~~A~~La~--G~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSL--QNEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTT--TSEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhC--CCEEEEEECCH
Confidence 7899999999999999997 68999998864
No 458
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=43.01 E-value=30 Score=39.79 Aligned_cols=43 Identities=16% Similarity=0.115 Sum_probs=31.4
Q ss_pred cEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCC
Q psy4102 304 LHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGA 352 (1049)
Q Consensus 304 l~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa 352 (1049)
.+|+++++|++|..+ +++++ |.+.++++..+++|+ .||+|+..
T Consensus 252 ~~i~~~~~V~~i~~~----~~~v~-v~~~~g~~~~~~~ad-~vI~a~p~ 294 (489)
T 2jae_A 252 DNIVFGAEVTSMKNV----SEGVT-VEYTAGGSKKSITAD-YAICTIPP 294 (489)
T ss_dssp GGEETTCEEEEEEEE----TTEEE-EEEEETTEEEEEEES-EEEECSCH
T ss_pred CeEEECCEEEEEEEc----CCeEE-EEEecCCeEEEEECC-EEEECCCH
Confidence 679999999999887 34444 555444444578997 59999863
No 459
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=42.67 E-value=17 Score=42.07 Aligned_cols=33 Identities=12% Similarity=0.249 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++.|||.|..|..+|..|+++ |.+|.+.++.+
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~~ 48 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESR-GYTVSIFNRSR 48 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred CeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 4799999999999999999998 89999998764
No 460
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=42.58 E-value=28 Score=40.47 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=28.4
Q ss_pred ccEEEECCChhHHHHHHHHhc----CCC-------CeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSE----NPD-------WKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae----~~G-------~kVLVLEaG~ 124 (1049)
--+||.|+|.||+.+|..|.. . | .++.++++-+
T Consensus 283 ~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i~~~D~~G 326 (555)
T 1gq2_A 283 HTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRIWMVDSKG 326 (555)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTEEEEETTE
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcEEEEECCC
Confidence 469999999999999999987 5 5 5799999865
No 461
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=42.46 E-value=25 Score=41.25 Aligned_cols=55 Identities=13% Similarity=0.287 Sum_probs=40.1
Q ss_pred hHHchHHhhhcCCcEEecCceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEcCeEEEEcCCCc
Q psy4102 291 SKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 353 (1049)
Q Consensus 291 ~~~~L~~~~~~~nl~I~~~t~V~~Il~d~~~~~~rv~GV~~~~~g~~~~v~A~k~VILAAGa~ 353 (1049)
...+|...+++.|++++.+ +|++|..+ +++.+++|.. .+|+ +++|+ .||.|+|+.
T Consensus 167 l~~~L~~~a~~~gv~~~~~-~v~~i~~~---~~g~~~~v~~-~~g~--~i~ad-~vV~A~G~~ 221 (538)
T 2aqj_A 167 VADFLKRWAVERGVNRVVD-EVVDVRLN---NRGYISNLLT-KEGR--TLEAD-LFIDCSGMR 221 (538)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEEC---TTSCEEEEEE-TTSC--EECCS-EEEECCGGG
T ss_pred HHHHHHHHHHHCCCEEEEe-eEeEEEEc---CCCcEEEEEE-CCCc--EEEeC-EEEECCCCc
Confidence 3445656666689999999 89999876 2456777765 3454 58896 599999963
No 462
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=42.34 E-value=18 Score=38.10 Aligned_cols=32 Identities=31% Similarity=0.421 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||+|.+|..+|..|.+. |.+|.+.++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-GLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 699999999999999999998 77999998753
No 463
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=41.91 E-value=18 Score=39.11 Aligned_cols=33 Identities=24% Similarity=0.466 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.+.|||.|..|...|..|++. |.+|.+.++.+
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ-GKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 3699999999999999999998 89999998764
No 464
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=41.83 E-value=19 Score=36.90 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=27.5
Q ss_pred EEEECC-ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGA-GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~-G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
++|.|+ |..|..+|.+|+++ |.+|+++.+..
T Consensus 10 vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~ 41 (244)
T 1cyd_A 10 ALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTN 41 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 888887 78899999999998 99999998753
No 465
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=41.73 E-value=19 Score=39.36 Aligned_cols=33 Identities=18% Similarity=0.392 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
--+.|||+|..|.++|..|+.. +. .|.|+|.-+
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~-~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLK-ELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCc
Confidence 3599999999999999999997 77 999999864
No 466
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=41.66 E-value=19 Score=38.62 Aligned_cols=32 Identities=16% Similarity=0.151 Sum_probs=27.9
Q ss_pred cEEEECCC---hhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAG---SAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G---~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
=+||.|++ ..|..+|.+|++. |.+|+++.+..
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~ 66 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSE 66 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 38899985 7899999999998 99999998763
No 467
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=41.60 E-value=15 Score=42.66 Aligned_cols=33 Identities=12% Similarity=0.336 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhcCC-CCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENP-DWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~-G~kVLVLEaG~ 124 (1049)
.+.|||.|..|+..|..|++.+ |.+|+++++.+
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5999999999999999999973 68999998754
No 468
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=41.43 E-value=16 Score=38.20 Aligned_cols=29 Identities=21% Similarity=0.266 Sum_probs=26.2
Q ss_pred EEEECCChhHHHHHHHHhcCCCCeEEEEcc
Q psy4102 93 FIVIGAGSAGAVVANRLSENPDWKILLIEA 122 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~~G~kVLVLEa 122 (1049)
+.|||.|..|...|..|++. |.+|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~-g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSR-GVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHT-TCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHC-CCeEEEeCC
Confidence 67999999999999999998 899998655
No 469
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=41.39 E-value=18 Score=41.97 Aligned_cols=32 Identities=28% Similarity=0.423 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-GFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 588999999999999999998 89999998753
No 470
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=41.38 E-value=16 Score=39.71 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCC-eEEEEccC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDW-KILLIEAG 123 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG 123 (1049)
-.+.|||.|..|...|..|++. |. +|.+.++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCC
Confidence 3699999999999999999998 88 99999985
No 471
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=41.29 E-value=17 Score=36.75 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=29.0
Q ss_pred cEEEECC-ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGA-GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~-G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|.|| |..|..++.+|.+. |.+|.++.|.+
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNR-GFEVTAVVRHP 38 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCG
T ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCc
Confidence 4899995 99999999999998 89999999875
No 472
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=41.05 E-value=12 Score=43.83 Aligned_cols=31 Identities=32% Similarity=0.498 Sum_probs=27.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
-++|+|+|.+|..+|..|++. |.+|.++.|.
T Consensus 366 ~vlV~GaGGig~aia~~L~~~-G~~V~i~~R~ 396 (523)
T 2o7s_A 366 TVVVIGAGGAGKALAYGAKEK-GAKVVIANRT 396 (523)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CC-CEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 599999999999999999998 7899999875
No 473
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=41.04 E-value=19 Score=44.12 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+-|||+|..|.-.|..+|.. |.+|+|+|..+
T Consensus 318 ~v~ViGaG~MG~gIA~~~a~a-G~~V~l~D~~~ 349 (742)
T 3zwc_A 318 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 349 (742)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEEcccHHHHHHHHHHHhC-CCchhcccchH
Confidence 589999999999999999998 99999999764
No 474
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=41.04 E-value=20 Score=40.72 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|||.|..|..+|.+|... |.+|++.|+.+
T Consensus 222 tV~ViG~G~IGk~vA~~Lra~-Ga~Viv~D~dp 253 (435)
T 3gvp_A 222 QVVVCGYGEVGKGCCAALKAM-GSIVYVTEIDP 253 (435)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 699999999999999999887 89999999754
No 475
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=40.72 E-value=20 Score=38.35 Aligned_cols=33 Identities=15% Similarity=0.269 Sum_probs=30.0
Q ss_pred cEEEECC-ChhHHHHHHHHhcCCCCeEEEEccCCC
Q psy4102 92 DFIVIGA-GSAGAVVANRLSENPDWKILLIEAGGD 125 (1049)
Q Consensus 92 DvIVVG~-G~aG~~aA~rLae~~G~kVLVLEaG~~ 125 (1049)
-++|.|| |..|..++.+|.++ |.+|.++.+...
T Consensus 9 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 42 (321)
T 3vps_A 9 RILITGGAGFIGGHLARALVAS-GEEVTVLDDLRV 42 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCCEEEECCCSS
T ss_pred eEEEECCCChHHHHHHHHHHHC-CCEEEEEecCCc
Confidence 4899999 99999999999998 899999998764
No 476
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=40.64 E-value=17 Score=37.99 Aligned_cols=32 Identities=13% Similarity=0.318 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCC----CeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPD----WKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G----~kVLVLEaG~ 124 (1049)
-+.|||+|..|...|..|++. | .+|.+.++.+
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~-g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANA-NIIKKENLFYYGPSK 41 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TSSCGGGEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCCCCCeEEEEeCCc
Confidence 589999999999999999987 7 6899998765
No 477
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=40.60 E-value=21 Score=37.27 Aligned_cols=31 Identities=23% Similarity=0.372 Sum_probs=26.6
Q ss_pred EEEECCC-h--hHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGAG-S--AGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G-~--aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
++|.|++ . .|..+|.+|++. |.+|+++.+..
T Consensus 10 vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~ 43 (266)
T 3oig_A 10 IVVMGVANKRSIAWGIARSLHEA-GARLIFTYAGE 43 (266)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCch
Confidence 8899974 4 799999999998 99999997753
No 478
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=40.59 E-value=23 Score=36.86 Aligned_cols=31 Identities=26% Similarity=0.572 Sum_probs=27.5
Q ss_pred EEEECC-ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGA-GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~-G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
++|.|+ |..|..+|.+|+++ |.+|+++.+..
T Consensus 25 vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~ 56 (251)
T 3orf_A 25 ILVLGGSGALGAEVVKFFKSK-SWNTISIDFRE 56 (251)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 788886 57899999999998 99999999875
No 479
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=40.48 E-value=21 Score=37.44 Aligned_cols=31 Identities=19% Similarity=0.267 Sum_probs=26.7
Q ss_pred EEEECCC---hhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGAG---SAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G---~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+||-|++ ..|..+|.+|+++ |.+|++..+..
T Consensus 9 alVTGaa~~~GIG~aiA~~la~~-Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 9 YVIMGIANKRSIAFGVAKVLDQL-GAKLVFTYRKE 42 (256)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred EEEECCCCCchHHHHHHHHHHHC-CCEEEEEECCH
Confidence 7888863 5899999999999 99999998864
No 480
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=40.43 E-value=21 Score=38.62 Aligned_cols=29 Identities=21% Similarity=0.194 Sum_probs=26.2
Q ss_pred EEEECC---ChhHHHHHHHHhcCCCCeEEEEcc
Q psy4102 93 FIVIGA---GSAGAVVANRLSENPDWKILLIEA 122 (1049)
Q Consensus 93 vIVVG~---G~aG~~aA~rLae~~G~kVLVLEa 122 (1049)
+||.|+ |..|..+|.+|++. |.+|+++.+
T Consensus 12 ~lVTGa~~s~GIG~aia~~la~~-G~~Vv~~~r 43 (315)
T 2o2s_A 12 AFVAGVADSHGYGWAIAKHLASA-GARVALGTW 43 (315)
T ss_dssp EEEECCSSSSSHHHHHHHHHHTT-TCEEEEEEC
T ss_pred EEEeCCCCCCChHHHHHHHHHHC-CCEEEEEec
Confidence 889996 78999999999998 999999864
No 481
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=40.38 E-value=20 Score=36.75 Aligned_cols=32 Identities=22% Similarity=0.412 Sum_probs=28.6
Q ss_pred cEEEEC-CChhHHHHHHHHhcCCC-CeEEEEccCC
Q psy4102 92 DFIVIG-AGSAGAVVANRLSENPD-WKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG-~G~aG~~aA~rLae~~G-~kVLVLEaG~ 124 (1049)
-++|.| +|..|..+|.+|+++ | .+|.++.|.+
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~-G~~~V~~~~R~~ 58 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADK-QTIKQTLFARQP 58 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTC-TTEEEEEEESSG
T ss_pred EEEEEeCCcHHHHHHHHHHHhC-CCceEEEEEcCh
Confidence 489999 599999999999998 7 8999998865
No 482
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=40.29 E-value=17 Score=39.16 Aligned_cols=31 Identities=26% Similarity=0.248 Sum_probs=27.7
Q ss_pred EEEECCChhHHHHHHHHhcCCCC--eEEEEccCC
Q psy4102 93 FIVIGAGSAGAVVANRLSENPDW--KILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~~G~--kVLVLEaG~ 124 (1049)
+.|||+|..|.++|..|++. +. .|.+++.-+
T Consensus 3 I~ViGaG~vG~~la~~l~~~-~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLN-LDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHH-SCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCh
Confidence 78999999999999999987 66 899999754
No 483
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=40.10 E-value=21 Score=37.83 Aligned_cols=30 Identities=23% Similarity=0.324 Sum_probs=27.2
Q ss_pred EEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
+.|||+|..|...|..|++ |.+|.+.++.+
T Consensus 4 i~iiG~G~~G~~~a~~l~~--g~~V~~~~~~~ 33 (289)
T 2cvz_A 4 VAFIGLGAMGYPMAGHLAR--RFPTLVWNRTF 33 (289)
T ss_dssp EEEECCSTTHHHHHHHHHT--TSCEEEECSST
T ss_pred EEEEcccHHHHHHHHHHhC--CCeEEEEeCCH
Confidence 7899999999999999987 78999998764
No 484
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=40.05 E-value=20 Score=38.16 Aligned_cols=31 Identities=19% Similarity=0.388 Sum_probs=27.9
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG 123 (1049)
.++|+|+|.+|..+|..|++. |. +|.|+-|-
T Consensus 121 ~vlvlGaGgaarav~~~L~~~-G~~~i~v~nRt 152 (271)
T 1npy_A 121 KVIVHGSGGMAKAVVAAFKNS-GFEKLKIYARN 152 (271)
T ss_dssp CEEEECSSTTHHHHHHHHHHT-TCCCEEEECSC
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 599999999999999999998 65 89999775
No 485
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=39.95 E-value=21 Score=41.46 Aligned_cols=32 Identities=13% Similarity=0.255 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.+.|||.|..|...|..|++. |.+|.+.++.+
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 689999999999999999998 89999998864
No 486
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=39.94 E-value=21 Score=40.69 Aligned_cols=32 Identities=9% Similarity=0.258 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-.+.|||.|..|+..|..|++ |.+|+++++.+
T Consensus 37 mkIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ--NHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHc--CCeEEEEecCH
Confidence 369999999999999999996 79999999864
No 487
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=39.91 E-value=22 Score=36.57 Aligned_cols=31 Identities=16% Similarity=0.259 Sum_probs=27.3
Q ss_pred EEEECC-ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGA-GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~-G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
++|.|+ |..|..+|.+|++. |.+|+++.+..
T Consensus 10 vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~ 41 (244)
T 3d3w_A 10 VLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQ 41 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 788887 78999999999998 89999998753
No 488
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=39.89 E-value=19 Score=37.80 Aligned_cols=31 Identities=19% Similarity=0.199 Sum_probs=27.6
Q ss_pred EEEECC---ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGA---GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~---G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
++|.|+ |..|..+|.+|++. |.+|+++.+..
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~~-G~~V~~~~r~~ 43 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDR 43 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHT-TCEEEEEECSC
T ss_pred EEEECCCCCCchHHHHHHHHHHC-CCEEEEEecCh
Confidence 889994 88999999999998 99999998754
No 489
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=39.86 E-value=20 Score=41.57 Aligned_cols=32 Identities=16% Similarity=0.294 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|||.|..|..+|..|... |.+|++.|+.+
T Consensus 276 tV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~ 307 (494)
T 3ce6_A 276 KVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDP 307 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 599999999999999999887 89999999864
No 490
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=39.77 E-value=19 Score=37.66 Aligned_cols=31 Identities=13% Similarity=0.143 Sum_probs=27.4
Q ss_pred EEEECC---ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGA---GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~---G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
++|.|+ |..|..+|.+|+++ |.+|+++.+..
T Consensus 12 vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~ 45 (265)
T 1qsg_A 12 ILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQND 45 (265)
T ss_dssp EEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESST
T ss_pred EEEECCCCCCCHHHHHHHHHHHC-CCEEEEEcCcH
Confidence 888887 58999999999998 99999998754
No 491
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=39.74 E-value=22 Score=38.68 Aligned_cols=32 Identities=19% Similarity=0.267 Sum_probs=28.4
Q ss_pred ccEEEECCC-hhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 91 YDFIVIGAG-SAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 91 ~DvIVVG~G-~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
-.++|||+| ..|..+|..|... |.+|.++++.
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~-gAtVtv~nR~ 210 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLAND-GATVYSVDVN 210 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSS
T ss_pred CEEEEECCCcchHHHHHHHHHHC-CCEEEEEeCc
Confidence 479999999 5699999999998 8999999775
No 492
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=39.71 E-value=21 Score=39.52 Aligned_cols=31 Identities=23% Similarity=0.421 Sum_probs=28.3
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG 123 (1049)
-++|+|.|..|..+|.+|.+. |.+|++.|..
T Consensus 177 tV~I~G~GnVG~~~A~~l~~~-GakVvvsD~~ 207 (355)
T 1c1d_A 177 TVLVQGLGAVGGSLASLAAEA-GAQLLVADTD 207 (355)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 599999999999999999998 8999998753
No 493
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=39.50 E-value=18 Score=39.65 Aligned_cols=31 Identities=26% Similarity=0.428 Sum_probs=27.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC--eEEEEccC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW--KILLIEAG 123 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~--kVLVLEaG 123 (1049)
-+.|||+|..|.++|..|++. +. .|.++|.-
T Consensus 7 kI~ViGaG~vG~~~a~~l~~~-~~~~~l~l~D~~ 39 (326)
T 3pqe_A 7 KVALIGAGFVGSSYAFALINQ-GITDELVVIDVN 39 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCceEEEEecc
Confidence 589999999999999999987 65 89999974
No 494
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=39.41 E-value=17 Score=44.21 Aligned_cols=32 Identities=22% Similarity=0.426 Sum_probs=29.9
Q ss_pred cEEEEC--CChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIG--AGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG--~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
.++||| +|..|+-+|..|++. |.+|.++|+.+
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~-g~~Vtlv~~~~ 558 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQK-GYEVSIVTPGA 558 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEEEcCCCCccHHHHHHHHHhC-CCeeEEEeccc
Confidence 499999 999999999999998 89999999986
No 495
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=39.39 E-value=22 Score=36.81 Aligned_cols=31 Identities=23% Similarity=0.428 Sum_probs=26.7
Q ss_pred EEEECC-ChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 93 FIVIGA-GSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 93 vIVVG~-G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
++|.|+ |..|..+|.+|+++ |.+|+++.+..
T Consensus 9 vlVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~ 40 (247)
T 3rwb_A 9 ALVTGAAQGIGKAIAARLAAD-GATVIVSDINA 40 (247)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 788886 67899999999998 99999997753
No 496
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=39.13 E-value=21 Score=38.94 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHhcCCC----CeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPD----WKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G----~kVLVLEaG~ 124 (1049)
-.+.|||+|..|...|..|++. | .+|.+.++.+
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~-G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA-GVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT-TSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCCCcceEEEECCCc
Confidence 3599999999999999999998 7 7899998764
No 497
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=38.84 E-value=21 Score=40.92 Aligned_cols=32 Identities=13% Similarity=0.202 Sum_probs=28.4
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-++|+|+|..|..+|..|++. |.+|.++.+..
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~-G~~V~v~~R~~ 36 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDS-GIKVTVACRTL 36 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTT-TCEEEEEESSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-cCEEEEEECCH
Confidence 489999999999999999987 89999998753
No 498
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=38.77 E-value=21 Score=39.28 Aligned_cols=32 Identities=13% Similarity=0.259 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
-+.|||.|..|...|..|.+. |.+|.+.++.+
T Consensus 10 kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAA-NHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999998 89999998764
No 499
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=38.77 E-value=23 Score=41.18 Aligned_cols=33 Identities=15% Similarity=0.234 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhcCCCCeEEEEccCC
Q psy4102 91 YDFIVIGAGSAGAVVANRLSENPDWKILLIEAGG 124 (1049)
Q Consensus 91 ~DvIVVG~G~aG~~aA~rLae~~G~kVLVLEaG~ 124 (1049)
..+.|||.|..|..+|..|+++ |.+|.+.++.+
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 5799999999999999999998 99999998865
No 500
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=38.76 E-value=23 Score=38.71 Aligned_cols=32 Identities=19% Similarity=0.403 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHhcCCCC-eEEEEccCC
Q psy4102 92 DFIVIGAGSAGAVVANRLSENPDW-KILLIEAGG 124 (1049)
Q Consensus 92 DvIVVG~G~aG~~aA~rLae~~G~-kVLVLEaG~ 124 (1049)
-+.|||+|..|.++|..|+.. +. .|.++|.-+
T Consensus 7 kI~iiGaG~vG~~~a~~l~~~-~~~~v~l~Di~~ 39 (321)
T 3p7m_A 7 KITLVGAGNIGGTLAHLALIK-QLGDVVLFDIAQ 39 (321)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCh
Confidence 589999999999999999987 66 999999865
Done!