BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4109
(77 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O43709|WBS22_HUMAN Uncharacterized methyltransferase WBSCR22 OS=Homo sapiens
GN=WBSCR22 PE=1 SV=2
Length = 281
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 54/63 (85%)
Query: 11 ARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLF 70
A DRE+EGDL+L D+GQG+PF+ G FDG ISISA+QWLCNA+K S NPAKRLY FF+SLF
Sbjct: 91 AVDREIEGDLLLGDMGQGIPFKPGTFDGCISISAVQWLCNANKKSENPAKRLYCFFASLF 150
Query: 71 ACL 73
+ L
Sbjct: 151 SVL 153
>sp|Q55DA6|WBS22_DICDI Probable methyltransferase WBSCR22 homolog OS=Dictyostelium
discoideum GN=DDB_G0269722 PE=3 SV=1
Length = 287
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/65 (70%), Positives = 55/65 (84%)
Query: 9 NVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSS 68
+VA DREVEGD++L D+GQG PFRAG+FD AISISA+QWLCNA+K+ HNP KRL+ FF S
Sbjct: 86 DVAIDREVEGDVMLRDIGQGFPFRAGSFDAAISISAIQWLCNAEKSHHNPRKRLHTFFQS 145
Query: 69 LFACL 73
LF L
Sbjct: 146 LFNVL 150
>sp|Q9CY21|WBS22_MOUSE Uncharacterized methyltransferase WBSCR22 OS=Mus musculus
GN=Wbscr22 PE=2 SV=1
Length = 281
Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/65 (67%), Positives = 54/65 (83%)
Query: 9 NVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSS 68
+ A DR+ EGDL+L D+GQGVPFR G+FDG ISISA+QWLCNA+K S PA+RLY FFSS
Sbjct: 89 DAALDRDTEGDLLLGDMGQGVPFRPGSFDGCISISAVQWLCNANKKSDVPARRLYCFFSS 148
Query: 69 LFACL 73
L++ L
Sbjct: 149 LYSAL 153
>sp|Q58DP0|WBS22_BOVIN Uncharacterized methyltransferase WBSCR22 OS=Bos taurus GN=WBSCR22
PE=2 SV=1
Length = 281
Score = 96.7 bits (239), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 11 ARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLF 70
A DRE +GD++L D+GQG+PF+ G FD ISISA+QWLCNA+K S PAKRLY FFSSL+
Sbjct: 91 ALDRETQGDVILGDMGQGIPFKPGTFDACISISAVQWLCNANKKSDIPAKRLYCFFSSLY 150
Query: 71 ACL 73
+ L
Sbjct: 151 SVL 153
>sp|P25627|BUD23_YEAST Putative methyltransferase BUD23 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=BUD23 PE=1 SV=1
Length = 275
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 52/60 (86%)
Query: 14 REVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73
RE+EGDL+L D+G G+PFRAG+FD AISISA+QWLCNAD + ++P +RL +FF++L+A L
Sbjct: 89 RELEGDLMLQDMGTGIPFRAGSFDAAISISAIQWLCNADTSYNDPKQRLMRFFNTLYAAL 148
>sp|Q10162|YAU6_SCHPO Putative methyltransferase C26A3.06 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC26A3.06 PE=4 SV=1
Length = 268
Score = 86.3 bits (212), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 14 REVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLF 70
+E+EGDL+L D+G GVPFR G FDG ISISA+QWL NADKT + P +RL +FF +L+
Sbjct: 89 QEIEGDLLLCDMGTGVPFRPGTFDGVISISAIQWLLNADKTCNVPQRRLNRFFQTLY 145
>sp|Q64518|AT2A3_MOUSE Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus
GN=Atp2a3 PE=2 SV=3
Length = 1038
Score = 33.1 bits (74), Expect = 0.53, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 30 PFRAGAFDGAISISALQWLCNADKTSHNPAKRLYK 64
P R G FDG + ++ + LCN +N AK +Y+
Sbjct: 401 PVRCGQFDGLVELATICALCNDSALDYNEAKGVYE 435
>sp|Q93084|AT2A3_HUMAN Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Homo sapiens
GN=ATP2A3 PE=1 SV=2
Length = 1043
Score = 33.1 bits (74), Expect = 0.53, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 30 PFRAGAFDGAISISALQWLCNADKTSHNPAKRLYK 64
P R G FDG + ++ + LCN +N AK +Y+
Sbjct: 401 PVRCGQFDGLVELATICALCNDSALDYNEAKGVYE 435
>sp|Q9YGL9|AT2A3_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Gallus
gallus GN=ATP2A3 PE=2 SV=1
Length = 1042
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 30 PFRAGAFDGAISISALQWLCNADKTSHNPAKRLYK 64
P R G +DG + ++ + LCN +N +K++Y+
Sbjct: 401 PVRCGQYDGLVELATICALCNDSSLDYNESKKVYE 435
>sp|Q8C008|DZAN1_MOUSE Double zinc ribbon and ankyrin repeat-containing protein 1 OS=Mus
musculus GN=Dzank1 PE=1 SV=2
Length = 778
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 37 DGAISISALQWLCNADKTSHNPAKRLYKFFSSLFAC--LW 74
+G + + QWLCN D+ H PA+ S C LW
Sbjct: 329 EGPLPPTQEQWLCNGDEVPHPPARNGETISCSRCGCQNLW 368
>sp|P04191|AT2A1_RABIT Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Oryctolagus
cuniculus GN=ATP2A1 PE=1 SV=1
Length = 1001
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 17 EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYK 64
EG+++ +D P R+G FDG + ++ + LCN N K +Y+
Sbjct: 392 EGEVLKND----KPIRSGQFDGLVELATICALCNDSSLDFNETKGVYE 435
>sp|Q64578|AT2A1_RAT Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus
norvegicus GN=Atp2a1 PE=2 SV=1
Length = 994
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 17 EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYK 64
EG+++ +D P RAG +DG + ++ + LCN N K +Y+
Sbjct: 392 EGEVLKND----KPVRAGQYDGLVELATICALCNDSSLDFNETKGVYE 435
>sp|Q8R429|AT2A1_MOUSE Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus
GN=Atp2a1 PE=2 SV=1
Length = 994
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 17 EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYK 64
EG+++ +D P RAG +DG + ++ + LCN N K +Y+
Sbjct: 392 EGEVLKND----KPVRAGQYDGLVELATICALCNDSSLDFNETKGVYE 435
>sp|Q07G10|ALKB8_XENTR Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis
GN=alkbh8 PE=2 SV=2
Length = 628
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 9 NVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADK 53
++ R+R E V L VPFRAGAFD ISI+ + ++
Sbjct: 439 DICRERTFEA-FVCDALS--VPFRAGAFDACISIAVIHHFATEER 480
>sp|O14983|AT2A1_HUMAN Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Homo sapiens
GN=ATP2A1 PE=1 SV=1
Length = 1001
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 17 EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYK 64
EG+++ +D P R G +DG + ++ + LCN N AK +Y+
Sbjct: 392 EGEVLKND----KPVRPGQYDGLVELATICALCNDSSLDFNEAKGVYE 435
>sp|Q749W5|BIOC_GEOSL Malonyl-CoA O-methyltransferase BioC OS=Geobacter sulfurreducens
(strain ATCC 51573 / DSM 12127 / PCA) GN=bioC PE=3 SV=1
Length = 267
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 11 ARD---REVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADK 53
ARD R +E + ++D + +P R G FD +S S QWL D+
Sbjct: 82 ARDNLGRTMERLVAVAD-AEHLPLRDGVFDLVVSTSTFQWLTTLDR 126
>sp|Q0VCY0|AT2A1_BOVIN Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Bos taurus
GN=ATP2A1 PE=1 SV=1
Length = 993
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 17 EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYK 64
EG+++ +D P R+G +DG + ++ + LCN N K +Y+
Sbjct: 392 EGEVLKND----KPVRSGQYDGLVELATICALCNDSSLDFNETKGIYE 435
>sp|P18596|AT2A3_RAT Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus
norvegicus GN=Atp2a3 PE=1 SV=2
Length = 1061
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 32 RAGAFDGAISISALQWLCNADKTSHNPAKRLYK 64
R G FDG + ++ + LCN +N AK +Y+
Sbjct: 403 RCGQFDGLVELATICALCNDSALDYNEAKGVYE 435
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 17 EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPA 59
E L+LSD Q +PFR G DG+ + S D S NP+
Sbjct: 36 EEQLLLSD-QQSLPFRQGTLDGSFTCSTRSPAYRPDYHSDNPS 77
>sp|Q00779|AT2A2_FELCA Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Felis catus
GN=ATP2A2 PE=2 SV=1
Length = 997
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 30 PFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFF 66
P + +DG + ++ + LCN +N AK +YK F
Sbjct: 401 PVKCHQYDGLVELATICALCNDSALDYNEAKGVYKKF 437
>sp|Q1GT23|RPOB_SPHAL DNA-directed RNA polymerase subunit beta OS=Sphingopyxis alaskensis
(strain DSM 13593 / LMG 18877 / RB2256) GN=rpoB PE=3 SV=1
Length = 1392
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 5 AFYTNVARDREVEGDLVL-SDLGQGVPFRAGAFDGA 39
A Y R R+ EG + L S+L GVPF FDGA
Sbjct: 1188 AEYVEDIRSRDAEGIIELASNLKVGVPFATPVFDGA 1223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,634,179
Number of Sequences: 539616
Number of extensions: 938600
Number of successful extensions: 2635
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2617
Number of HSP's gapped (non-prelim): 23
length of query: 77
length of database: 191,569,459
effective HSP length: 48
effective length of query: 29
effective length of database: 165,667,891
effective search space: 4804368839
effective search space used: 4804368839
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)