Query psy4109
Match_columns 77
No_of_seqs 105 out of 692
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 17:13:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4109.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4109hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ld4_A Anamorsin; methyltransf 99.1 4.4E-11 1.5E-15 76.4 2.6 62 1-74 26-92 (176)
2 1vl5_A Unknown conserved prote 99.1 1.6E-10 5.4E-15 77.6 4.7 62 1-74 65-131 (260)
3 4hg2_A Methyltransferase type 99.0 1.2E-10 4.1E-15 80.4 2.4 60 1-74 67-126 (257)
4 1pjz_A Thiopurine S-methyltran 99.0 2.7E-10 9.3E-15 75.0 3.5 64 1-74 50-131 (203)
5 2gs9_A Hypothetical protein TT 98.9 1.4E-09 4.8E-14 70.6 5.3 62 1-74 62-123 (211)
6 3pfg_A N-methyltransferase; N, 98.9 1.5E-09 5.2E-14 72.9 5.4 64 1-74 78-142 (263)
7 3ccf_A Cyclopropane-fatty-acyl 98.9 1.7E-09 5.9E-14 73.4 5.6 61 1-74 85-145 (279)
8 2yqz_A Hypothetical protein TT 98.9 1.8E-09 6.3E-14 71.7 5.2 62 1-74 67-132 (263)
9 3h2b_A SAM-dependent methyltra 98.9 5.1E-10 1.8E-14 72.4 2.2 64 1-74 69-132 (203)
10 2p35_A Trans-aconitate 2-methy 98.9 1.5E-09 5.1E-14 72.2 4.2 61 1-74 63-123 (259)
11 4gek_A TRNA (CMO5U34)-methyltr 98.9 2.7E-09 9.3E-14 73.5 5.6 62 1-74 102-169 (261)
12 3ege_A Putative methyltransfer 98.9 9.6E-10 3.3E-14 74.3 3.0 61 1-74 62-122 (261)
13 3ujc_A Phosphoethanolamine N-m 98.9 4.5E-09 1.5E-13 69.8 6.0 64 1-74 84-150 (266)
14 3dlc_A Putative S-adenosyl-L-m 98.8 3.5E-09 1.2E-13 68.2 5.1 62 1-74 72-139 (219)
15 1xxl_A YCGJ protein; structura 98.8 3.7E-09 1.3E-13 70.5 4.6 62 1-74 49-115 (239)
16 3g5l_A Putative S-adenosylmeth 98.8 3.8E-09 1.3E-13 70.4 4.4 62 1-74 73-136 (253)
17 2o57_A Putative sarcosine dime 98.8 4.4E-09 1.5E-13 71.7 4.8 62 1-74 111-178 (297)
18 3ofk_A Nodulation protein S; N 98.8 7.2E-09 2.5E-13 67.5 5.2 64 1-74 79-145 (216)
19 2p8j_A S-adenosylmethionine-de 98.8 1.4E-08 4.7E-13 65.5 6.5 64 1-74 52-119 (209)
20 3l8d_A Methyltransferase; stru 98.8 5.8E-09 2E-13 68.7 4.7 62 1-74 81-144 (242)
21 3hnr_A Probable methyltransfer 98.8 5.1E-09 1.8E-13 68.2 4.3 64 1-75 73-137 (220)
22 3g5t_A Trans-aconitate 3-methy 98.8 6.1E-09 2.1E-13 71.5 4.7 61 1-74 67-140 (299)
23 4fsd_A Arsenic methyltransfera 98.8 7.5E-09 2.6E-13 74.1 5.2 62 1-74 114-194 (383)
24 3bxo_A N,N-dimethyltransferase 98.8 1.4E-08 4.7E-13 66.6 5.7 64 1-74 68-132 (239)
25 2gb4_A Thiopurine S-methyltran 98.7 3.5E-09 1.2E-13 72.7 2.8 64 1-74 96-182 (252)
26 1xtp_A LMAJ004091AAA; SGPP, st 98.7 1.1E-08 3.6E-13 67.9 4.6 64 1-74 122-188 (254)
27 2aot_A HMT, histamine N-methyl 98.7 2.1E-09 7.1E-14 73.8 0.9 62 1-74 88-163 (292)
28 3dh0_A SAM dependent methyltra 98.7 1.2E-08 4.3E-13 66.3 4.6 62 1-74 68-134 (219)
29 2p7i_A Hypothetical protein; p 98.7 6.7E-09 2.3E-13 67.9 3.2 61 1-74 70-132 (250)
30 3jwg_A HEN1, methyltransferase 98.7 9.5E-09 3.2E-13 67.2 3.7 64 1-74 59-132 (219)
31 1nkv_A Hypothetical protein YJ 98.7 8.3E-09 2.8E-13 68.6 3.4 61 1-74 65-131 (256)
32 3i9f_A Putative type 11 methyl 98.7 1.6E-08 5.4E-13 63.7 4.5 59 1-74 45-103 (170)
33 3sm3_A SAM-dependent methyltra 98.7 2.7E-08 9.4E-13 64.7 5.7 65 1-74 58-132 (235)
34 3ou2_A SAM-dependent methyltra 98.7 2.8E-08 9.4E-13 64.2 5.7 63 1-74 74-137 (218)
35 3bus_A REBM, methyltransferase 98.7 1.2E-08 4.1E-13 68.5 3.9 62 1-74 90-157 (273)
36 1vlm_A SAM-dependent methyltra 98.7 2.5E-08 8.7E-13 65.5 5.4 60 1-74 71-130 (219)
37 3dtn_A Putative methyltransfer 98.7 6.7E-09 2.3E-13 68.3 2.6 63 1-74 74-139 (234)
38 3jwh_A HEN1; methyltransferase 98.7 1.5E-08 5.1E-13 66.3 3.7 64 1-74 59-132 (217)
39 4htf_A S-adenosylmethionine-de 98.7 9.3E-09 3.2E-13 69.8 2.7 62 1-74 96-164 (285)
40 3bkw_A MLL3908 protein, S-aden 98.7 2.6E-08 8.7E-13 65.5 4.6 62 1-74 72-135 (243)
41 2g72_A Phenylethanolamine N-me 98.7 2.4E-08 8.2E-13 68.2 4.6 67 1-74 100-206 (289)
42 3kkz_A Uncharacterized protein 98.6 1.7E-08 5.8E-13 68.0 3.7 61 1-74 75-141 (267)
43 3mgg_A Methyltransferase; NYSG 98.6 2E-08 6.9E-13 67.6 4.0 62 1-74 67-133 (276)
44 2pxx_A Uncharacterized protein 98.6 6.1E-08 2.1E-12 62.3 5.9 73 1-74 71-150 (215)
45 2ex4_A Adrenal gland protein A 98.6 3.2E-08 1.1E-12 65.7 4.7 64 1-74 108-176 (241)
46 2a14_A Indolethylamine N-methy 98.6 3.2E-08 1.1E-12 67.2 4.6 67 1-74 84-188 (263)
47 3ocj_A Putative exported prote 98.6 2.8E-08 9.4E-13 68.6 4.3 64 1-74 149-218 (305)
48 3dli_A Methyltransferase; PSI- 98.6 7.4E-09 2.5E-13 68.8 1.2 62 1-75 69-132 (240)
49 3e23_A Uncharacterized protein 98.6 4.1E-08 1.4E-12 63.8 4.7 62 1-74 71-132 (211)
50 3f4k_A Putative methyltransfer 98.6 1.3E-08 4.4E-13 67.7 2.1 61 1-74 75-141 (257)
51 3bgv_A MRNA CAP guanine-N7 met 98.6 2.6E-08 8.9E-13 68.8 3.7 65 1-74 63-146 (313)
52 3thr_A Glycine N-methyltransfe 98.6 2.9E-08 9.7E-13 67.4 3.8 69 1-74 85-166 (293)
53 1y8c_A S-adenosylmethionine-de 98.6 2.9E-08 9.8E-13 65.1 3.5 64 1-74 65-133 (246)
54 3cgg_A SAM-dependent methyltra 98.6 1.5E-07 5.1E-12 59.4 6.5 64 1-74 74-138 (195)
55 3vc1_A Geranyl diphosphate 2-C 98.6 5.9E-08 2E-12 67.1 4.7 61 1-74 146-212 (312)
56 1ri5_A MRNA capping enzyme; me 98.5 9.6E-08 3.3E-12 64.4 5.0 66 1-74 93-165 (298)
57 3g07_A 7SK snRNA methylphospha 98.5 1.1E-07 3.6E-12 65.7 5.3 53 17-74 155-211 (292)
58 2qe6_A Uncharacterized protein 98.5 3.3E-08 1.1E-12 68.3 2.6 64 1-74 110-187 (274)
59 1ve3_A Hypothetical protein PH 98.5 1.5E-07 5.2E-12 61.1 5.5 64 1-74 66-133 (227)
60 3lcc_A Putative methyl chlorid 98.5 7.8E-08 2.7E-12 63.5 4.0 63 1-74 94-162 (235)
61 2vdw_A Vaccinia virus capping 98.5 6.2E-08 2.1E-12 67.9 3.7 66 1-74 77-160 (302)
62 2i62_A Nicotinamide N-methyltr 98.5 1E-07 3.5E-12 63.3 4.5 67 1-74 85-189 (265)
63 3gu3_A Methyltransferase; alph 98.5 7.4E-08 2.5E-12 65.8 3.2 61 1-74 53-117 (284)
64 1af7_A Chemotaxis receptor met 98.5 1.6E-07 5.3E-12 65.7 4.7 64 1-74 143-243 (274)
65 2avn_A Ubiquinone/menaquinone 98.5 3.7E-07 1.3E-11 61.4 6.4 61 1-74 82-143 (260)
66 2xvm_A Tellurite resistance pr 98.5 4E-08 1.4E-12 62.6 1.4 63 1-74 60-127 (199)
67 1zx0_A Guanidinoacetate N-meth 98.5 4.4E-08 1.5E-12 65.1 1.7 66 1-74 89-161 (236)
68 3d2l_A SAM-dependent methyltra 98.5 2.7E-07 9.2E-12 60.5 5.4 64 1-74 60-128 (243)
69 3hem_A Cyclopropane-fatty-acyl 98.5 6.4E-08 2.2E-12 66.4 2.5 69 1-75 101-175 (302)
70 3cc8_A Putative methyltransfer 98.4 1.4E-07 4.8E-12 61.0 3.7 61 1-74 60-121 (230)
71 3g2m_A PCZA361.24; SAM-depende 98.4 1.7E-07 6E-12 64.1 4.2 63 1-74 110-181 (299)
72 3m70_A Tellurite resistance pr 98.4 5.7E-08 1.9E-12 66.0 1.5 63 1-74 148-214 (286)
73 3htx_A HEN1; HEN1, small RNA m 98.4 2.5E-07 8.5E-12 74.1 5.3 64 1-74 752-826 (950)
74 3m33_A Uncharacterized protein 98.4 1.8E-07 6E-12 61.9 3.8 42 1-42 76-118 (226)
75 4e2x_A TCAB9; kijanose, tetron 98.4 2.1E-08 7.3E-13 71.7 -1.5 62 1-74 135-199 (416)
76 3giw_A Protein of unknown func 98.4 3.7E-08 1.3E-12 69.6 -0.7 50 1-51 111-176 (277)
77 3iv6_A Putative Zn-dependent a 98.3 8.7E-07 3E-11 61.6 5.7 62 1-73 73-139 (261)
78 2kw5_A SLR1183 protein; struct 98.3 7.3E-07 2.5E-11 57.3 4.6 62 1-74 57-122 (202)
79 3eey_A Putative rRNA methylase 98.3 7.6E-07 2.6E-11 57.1 4.6 71 1-74 53-130 (197)
80 1kpg_A CFA synthase;, cyclopro 98.3 3.6E-07 1.2E-11 61.9 2.9 62 1-75 93-160 (287)
81 1p91_A Ribosomal RNA large sub 98.3 7.4E-07 2.5E-11 59.8 4.1 43 1-44 115-157 (269)
82 3e8s_A Putative SAM dependent 98.2 5.6E-07 1.9E-11 58.0 2.7 60 1-74 80-143 (227)
83 3mti_A RRNA methylase; SAM-dep 98.2 9E-07 3.1E-11 56.3 3.5 71 1-74 50-126 (185)
84 3ggd_A SAM-dependent methyltra 98.2 2.8E-07 9.5E-12 61.0 0.3 65 1-75 84-155 (245)
85 1ne2_A Hypothetical protein TA 98.2 1.2E-06 4.2E-11 56.5 3.3 46 1-50 80-125 (200)
86 3dmg_A Probable ribosomal RNA 98.2 2.7E-06 9.1E-11 61.6 5.4 67 1-74 261-331 (381)
87 2fk8_A Methoxy mycolic acid sy 98.1 7.2E-07 2.5E-11 61.4 2.2 61 1-74 119-185 (318)
88 1wzn_A SAM-dependent methyltra 98.1 5.8E-06 2E-10 54.7 5.5 63 1-74 69-136 (252)
89 3q87_B N6 adenine specific DNA 98.1 2.9E-06 9.9E-11 54.2 3.8 45 1-51 50-94 (170)
90 1dus_A MJ0882; hypothetical pr 98.1 8.2E-06 2.8E-10 51.2 5.5 62 1-74 80-148 (194)
91 3evz_A Methyltransferase; NYSG 98.0 5.3E-06 1.8E-10 54.3 4.7 74 1-74 85-170 (230)
92 1yzh_A TRNA (guanine-N(7)-)-me 98.0 3.1E-06 1.1E-10 55.3 3.5 69 1-74 71-147 (214)
93 4azs_A Methyltransferase WBDD; 98.0 9.2E-07 3.1E-11 66.5 0.7 68 1-74 94-168 (569)
94 3bkx_A SAM-dependent methyltra 98.0 2.7E-06 9.2E-11 57.0 2.9 51 1-51 74-138 (275)
95 2qm3_A Predicted methyltransfe 98.0 6.5E-06 2.2E-10 58.7 4.1 62 1-74 201-268 (373)
96 3hm2_A Precorrin-6Y C5,15-meth 98.0 4.5E-06 1.5E-10 52.2 2.9 46 1-47 55-106 (178)
97 1o9g_A RRNA methyltransferase; 97.9 1.3E-05 4.4E-10 53.6 4.9 54 20-75 149-206 (250)
98 3adn_A Spermidine synthase; am 97.9 8.2E-06 2.8E-10 57.2 4.0 65 1-74 113-189 (294)
99 2r3s_A Uncharacterized protein 97.9 1.3E-05 4.4E-10 55.2 4.6 62 1-74 195-262 (335)
100 3dxy_A TRNA (guanine-N(7)-)-me 97.9 2.5E-06 8.4E-11 57.0 0.7 71 1-74 64-141 (218)
101 3ckk_A TRNA (guanine-N(7)-)-me 97.9 6.6E-06 2.3E-10 55.5 2.8 69 1-74 76-159 (235)
102 3i53_A O-methyltransferase; CO 97.9 2.9E-05 1E-09 53.9 6.0 62 1-75 199-266 (332)
103 2fca_A TRNA (guanine-N(7)-)-me 97.9 8.5E-06 2.9E-10 53.7 3.0 70 1-75 68-145 (213)
104 3gdh_A Trimethylguanosine synt 97.8 1.2E-06 4E-11 58.0 -1.8 50 1-52 106-161 (241)
105 2pjd_A Ribosomal RNA small sub 97.8 1.5E-05 5.2E-10 56.1 3.6 65 1-74 226-294 (343)
106 3lpm_A Putative methyltransfer 97.8 1.6E-05 5.5E-10 53.5 3.5 73 1-74 78-167 (259)
107 3orh_A Guanidinoacetate N-meth 97.8 7.6E-06 2.6E-10 54.8 1.6 63 1-74 89-161 (236)
108 4dcm_A Ribosomal RNA large sub 97.7 1.4E-05 4.7E-10 57.6 2.9 66 1-74 252-325 (375)
109 3dp7_A SAM-dependent methyltra 97.7 3.3E-05 1.1E-09 54.7 4.8 64 1-75 209-279 (363)
110 3p9n_A Possible methyltransfer 97.7 6E-06 2E-10 52.9 0.8 60 1-71 73-139 (189)
111 3tm4_A TRNA (guanine N2-)-meth 97.7 2.9E-05 9.8E-10 55.5 4.4 69 1-73 247-321 (373)
112 2fyt_A Protein arginine N-meth 97.7 2.6E-05 8.8E-10 55.2 4.1 64 1-74 93-162 (340)
113 2ozv_A Hypothetical protein AT 97.7 5.1E-05 1.7E-09 51.5 5.3 74 1-74 66-161 (260)
114 3q7e_A Protein arginine N-meth 97.7 1.2E-05 4E-10 57.0 2.1 64 1-74 95-164 (349)
115 3bwc_A Spermidine synthase; SA 97.7 8.9E-06 3E-10 56.8 1.3 64 1-74 125-201 (304)
116 3lbf_A Protein-L-isoaspartate 97.7 1.9E-05 6.5E-10 51.0 2.6 49 1-50 105-158 (210)
117 3grz_A L11 mtase, ribosomal pr 97.7 1.5E-05 5E-10 51.4 2.1 45 1-48 89-138 (205)
118 3fpf_A Mtnas, putative unchara 97.7 1.3E-05 4.6E-10 57.0 1.9 57 1-74 152-213 (298)
119 3lcv_B Sisomicin-gentamicin re 97.6 3.7E-05 1.3E-09 54.7 3.7 63 1-75 162-228 (281)
120 1vbf_A 231AA long hypothetical 97.6 1.8E-05 6E-10 51.8 1.9 48 1-49 98-148 (231)
121 3frh_A 16S rRNA methylase; met 97.6 3.2E-05 1.1E-09 54.2 3.2 53 1-55 132-188 (253)
122 3e05_A Precorrin-6Y C5,15-meth 97.6 7.1E-05 2.4E-09 48.2 4.3 59 1-74 70-133 (204)
123 3fzg_A 16S rRNA methylase; met 97.6 2.4E-05 8.2E-10 53.2 2.0 50 1-52 79-132 (200)
124 1qzz_A RDMB, aclacinomycin-10- 97.6 9.4E-05 3.2E-09 51.8 5.0 61 1-74 212-278 (374)
125 3mcz_A O-methyltransferase; ad 97.6 2.3E-05 7.9E-10 54.6 1.8 63 1-74 209-278 (352)
126 2zfu_A Nucleomethylin, cerebra 97.6 3.7E-05 1.3E-09 49.7 2.6 44 18-74 99-142 (215)
127 1inl_A Spermidine synthase; be 97.5 2.1E-05 7.2E-10 54.7 1.2 66 1-74 120-196 (296)
128 2fpo_A Methylase YHHF; structu 97.5 1.6E-05 5.6E-10 51.9 0.5 46 1-46 83-133 (202)
129 1iy9_A Spermidine synthase; ro 97.5 3.1E-05 1.1E-09 53.3 2.0 67 1-74 105-180 (275)
130 3gwz_A MMCR; methyltransferase 97.5 9.6E-05 3.3E-09 52.3 4.4 61 1-74 232-298 (369)
131 1uir_A Polyamine aminopropyltr 97.5 1.4E-05 4.7E-10 56.1 -0.2 68 1-74 107-186 (314)
132 2b3t_A Protein methyltransfera 97.5 4.5E-05 1.5E-09 51.7 2.3 45 1-47 139-188 (276)
133 2ip2_A Probable phenazine-spec 97.5 6.3E-05 2.1E-09 52.0 3.1 61 1-74 197-263 (334)
134 2b2c_A Spermidine synthase; be 97.5 2E-05 6.9E-10 55.7 0.5 65 1-74 138-213 (314)
135 2pt6_A Spermidine synthase; tr 97.5 1.8E-05 6.1E-10 55.9 0.0 65 1-74 146-221 (321)
136 2i7c_A Spermidine synthase; tr 97.5 2.2E-05 7.4E-10 54.3 0.4 65 1-74 108-183 (283)
137 1dl5_A Protein-L-isoaspartate 97.4 7E-05 2.4E-09 52.1 3.0 47 1-48 106-157 (317)
138 3ntv_A MW1564 protein; rossman 97.4 2.9E-05 9.9E-10 51.6 0.8 43 1-43 101-150 (232)
139 3tma_A Methyltransferase; thum 97.4 0.00013 4.3E-09 51.4 4.0 70 1-74 234-308 (354)
140 1xdz_A Methyltransferase GIDB; 97.4 1.9E-05 6.6E-10 52.5 -0.2 42 1-43 100-149 (240)
141 1fp1_D Isoliquiritigenin 2'-O- 97.4 7.4E-05 2.5E-09 52.8 2.8 59 1-74 239-297 (372)
142 2o07_A Spermidine synthase; st 97.4 2.8E-05 9.6E-10 54.5 0.4 67 1-74 125-200 (304)
143 1x19_A CRTF-related protein; m 97.4 9.6E-05 3.3E-09 51.8 3.1 61 1-74 220-286 (359)
144 1ej0_A FTSJ; methyltransferase 97.4 4.5E-06 1.5E-10 51.3 -3.6 57 17-74 63-127 (180)
145 3sso_A Methyltransferase; macr 97.4 1.6E-05 5.3E-10 59.1 -1.3 57 1-74 253-315 (419)
146 1fp2_A Isoflavone O-methyltran 97.4 0.00013 4.3E-09 51.2 3.4 60 1-75 218-277 (352)
147 4dzr_A Protein-(glutamine-N5) 97.4 1.5E-06 5E-11 55.6 -6.1 46 1-48 60-114 (215)
148 1wy7_A Hypothetical protein PH 97.3 0.00011 3.8E-09 47.2 2.8 45 1-49 78-126 (207)
149 3njr_A Precorrin-6Y methylase; 97.3 0.00014 4.8E-09 47.6 3.3 44 1-45 83-132 (204)
150 3r0q_C Probable protein argini 97.3 7.4E-05 2.5E-09 53.4 2.0 63 1-74 92-160 (376)
151 2yxe_A Protein-L-isoaspartate 97.3 7.5E-05 2.6E-09 48.2 1.9 48 1-49 108-160 (215)
152 1mjf_A Spermidine synthase; sp 97.3 4.1E-05 1.4E-09 52.8 0.5 64 1-74 104-184 (281)
153 1g6q_1 HnRNP arginine N-methyl 97.3 0.00015 5.1E-09 50.9 3.2 64 1-74 67-136 (328)
154 1fbn_A MJ fibrillarin homologu 97.3 0.00035 1.2E-08 46.0 4.7 59 1-74 104-169 (230)
155 2yxd_A Probable cobalt-precorr 97.3 0.0001 3.4E-09 45.8 2.0 42 1-44 63-109 (183)
156 3dr5_A Putative O-methyltransf 97.3 7.9E-05 2.7E-09 49.7 1.5 60 1-74 87-154 (221)
157 1i9g_A Hypothetical protein RV 97.2 0.00026 8.7E-09 47.5 3.8 42 1-43 130-179 (280)
158 3p9c_A Caffeic acid O-methyltr 97.2 0.00016 5.3E-09 51.4 2.8 60 1-75 231-290 (364)
159 3reo_A (ISO)eugenol O-methyltr 97.2 0.00016 5.4E-09 51.4 2.8 59 1-74 233-291 (368)
160 2vdv_E TRNA (guanine-N(7)-)-me 97.2 0.00043 1.5E-08 46.1 4.7 71 1-74 79-164 (246)
161 3gru_A Dimethyladenosine trans 97.2 0.00012 4E-09 51.6 1.7 47 1-48 78-127 (295)
162 3mq2_A 16S rRNA methyltransfer 97.2 0.00013 4.6E-09 47.2 1.9 61 1-74 57-131 (218)
163 3uwp_A Histone-lysine N-methyl 97.2 5.2E-05 1.8E-09 56.7 -0.1 61 1-74 203-279 (438)
164 2ift_A Putative methylase HI07 97.2 8.6E-05 2.9E-09 48.4 0.9 46 1-46 82-136 (201)
165 2pwy_A TRNA (adenine-N(1)-)-me 97.2 0.00034 1.1E-08 46.1 3.8 41 1-42 127-173 (258)
166 2b25_A Hypothetical protein; s 97.2 0.00012 4.1E-09 51.0 1.7 44 1-44 136-196 (336)
167 2gpy_A O-methyltransferase; st 97.2 5.7E-05 1.9E-09 49.7 0.0 45 1-45 84-136 (233)
168 3gjy_A Spermidine synthase; AP 97.2 0.00014 4.9E-09 51.9 2.1 65 1-74 119-191 (317)
169 1l3i_A Precorrin-6Y methyltran 97.2 9.2E-05 3.1E-09 46.2 1.0 58 1-74 61-125 (192)
170 2esr_A Methyltransferase; stru 97.2 3.4E-05 1.2E-09 48.5 -1.0 46 1-46 60-111 (177)
171 1nt2_A Fibrillarin-like PRE-rR 97.2 0.00054 1.9E-08 45.2 4.8 59 1-74 87-152 (210)
172 1tw3_A COMT, carminomycin 4-O- 97.2 0.00023 8E-09 49.6 3.1 61 1-74 213-279 (360)
173 1xj5_A Spermidine synthase 1; 97.1 0.00014 4.7E-09 51.8 1.6 65 1-74 150-226 (334)
174 1zg3_A Isoflavanone 4'-O-methy 97.1 0.00026 9E-09 49.6 3.0 60 1-75 223-282 (358)
175 1zq9_A Probable dimethyladenos 97.1 0.00029 9.9E-09 48.6 3.1 45 1-48 56-106 (285)
176 2ipx_A RRNA 2'-O-methyltransfe 97.1 0.00055 1.9E-08 45.0 4.2 43 1-44 108-156 (233)
177 3bzb_A Uncharacterized protein 97.1 0.0004 1.4E-08 47.5 3.5 63 1-74 108-191 (281)
178 3mb5_A SAM-dependent methyltra 97.1 0.00052 1.8E-08 45.4 3.9 41 1-43 124-170 (255)
179 2frn_A Hypothetical protein PH 97.1 0.0005 1.7E-08 47.0 3.8 42 1-44 154-201 (278)
180 2pbf_A Protein-L-isoaspartate 97.0 0.00018 6.1E-09 46.9 1.3 47 1-48 115-175 (227)
181 4df3_A Fibrillarin-like rRNA/T 97.0 0.00059 2E-08 46.7 4.0 61 1-74 108-173 (233)
182 1r18_A Protein-L-isoaspartate( 97.0 0.00027 9.3E-09 46.3 2.0 46 1-48 120-176 (227)
183 3tfw_A Putative O-methyltransf 97.0 0.00016 5.5E-09 48.5 0.7 43 1-43 94-144 (248)
184 3ldg_A Putative uncharacterize 97.0 0.0013 4.4E-08 47.7 5.4 66 1-75 262-333 (384)
185 2h00_A Methyltransferase 10 do 96.9 0.00063 2.2E-08 45.1 3.4 48 1-48 95-153 (254)
186 1g8a_A Fibrillarin-like PRE-rR 96.9 0.00094 3.2E-08 43.5 4.1 61 1-74 104-169 (227)
187 3k0b_A Predicted N6-adenine-sp 96.9 0.0012 4.1E-08 47.9 4.9 66 1-75 269-340 (393)
188 1i1n_A Protein-L-isoaspartate 96.9 0.00054 1.8E-08 44.6 2.5 47 1-48 108-164 (226)
189 2h1r_A Dimethyladenosine trans 96.9 0.0006 2.1E-08 47.4 2.9 45 1-48 70-119 (299)
190 1jsx_A Glucose-inhibited divis 96.8 0.0006 2.1E-08 43.6 2.6 41 1-43 95-140 (207)
191 2nxc_A L11 mtase, ribosomal pr 96.8 0.00027 9.4E-09 47.7 1.0 58 1-74 148-209 (254)
192 1ixk_A Methyltransferase; open 96.8 0.0011 3.7E-08 46.3 3.9 41 1-42 149-194 (315)
193 3u81_A Catechol O-methyltransf 96.8 0.00024 8.3E-09 46.5 0.4 48 1-48 89-147 (221)
194 3tr6_A O-methyltransferase; ce 96.8 0.00017 5.9E-09 46.8 -0.5 60 1-74 95-165 (225)
195 2fhp_A Methylase, putative; al 96.8 0.00022 7.4E-09 44.7 -0.0 46 1-46 73-127 (187)
196 1jg1_A PIMT;, protein-L-isoasp 96.8 0.0005 1.7E-08 45.3 1.7 47 1-49 120-172 (235)
197 1nv8_A HEMK protein; class I a 96.8 0.00044 1.5E-08 47.7 1.5 69 1-73 152-239 (284)
198 2y1w_A Histone-arginine methyl 96.8 0.00042 1.4E-08 48.9 1.4 46 1-49 79-130 (348)
199 2yvl_A TRMI protein, hypotheti 96.7 0.0018 6E-08 42.4 4.3 41 1-42 119-165 (248)
200 2bm8_A Cephalosporin hydroxyla 96.7 0.00014 4.9E-09 48.8 -1.3 44 1-44 115-161 (236)
201 2efj_A 3,7-dimethylxanthine me 96.7 0.007 2.4E-07 44.2 7.5 33 19-51 131-165 (384)
202 3c3p_A Methyltransferase; NP_9 96.7 0.00021 7.3E-09 46.2 -0.6 42 1-43 87-134 (210)
203 3ldu_A Putative methylase; str 96.6 0.0019 6.6E-08 46.5 4.2 66 1-75 263-334 (385)
204 3g89_A Ribosomal RNA small sub 96.6 0.0005 1.7E-08 46.6 0.9 43 1-44 110-160 (249)
205 1ws6_A Methyltransferase; stru 96.6 8.7E-05 3E-09 45.8 -2.7 46 1-46 69-121 (171)
206 3b5i_A S-adenosyl-L-methionine 96.6 0.0016 5.5E-08 47.4 3.5 23 29-51 144-166 (374)
207 2plw_A Ribosomal RNA methyltra 96.6 0.00035 1.2E-08 44.5 0.0 57 17-74 64-145 (201)
208 2wa2_A Non-structural protein 96.6 0.0001 3.5E-09 51.2 -2.7 65 1-74 109-182 (276)
209 3b3j_A Histone-arginine methyl 96.6 0.0012 4.1E-08 49.0 2.8 45 1-48 187-237 (480)
210 2hnk_A SAM-dependent O-methylt 96.5 0.0008 2.7E-08 44.4 1.1 60 1-74 91-172 (239)
211 1yb2_A Hypothetical protein TA 96.4 0.0022 7.5E-08 43.3 3.3 40 1-42 141-186 (275)
212 1uwv_A 23S rRNA (uracil-5-)-me 96.4 0.0017 5.6E-08 47.3 2.7 42 1-42 314-363 (433)
213 1o54_A SAM-dependent O-methylt 96.4 0.0021 7.2E-08 43.3 3.1 40 1-42 143-188 (277)
214 3a27_A TYW2, uncharacterized p 96.4 0.0013 4.3E-08 44.9 1.8 42 1-44 149-195 (272)
215 3lst_A CALO1 methyltransferase 96.3 0.0017 5.9E-08 45.3 2.3 44 18-74 234-277 (348)
216 3duw_A OMT, O-methyltransferas 96.3 0.00031 1.1E-08 45.6 -1.5 44 1-44 89-142 (223)
217 2oxt_A Nucleoside-2'-O-methylt 96.3 0.00025 8.6E-09 48.9 -2.1 65 1-74 101-174 (265)
218 3v97_A Ribosomal RNA large sub 96.2 0.0015 5E-08 50.7 1.7 72 1-74 568-648 (703)
219 1sui_A Caffeoyl-COA O-methyltr 96.2 0.00042 1.4E-08 46.7 -1.2 43 1-43 110-164 (247)
220 2cmg_A Spermidine synthase; tr 96.2 0.0018 6.3E-08 44.4 1.7 39 1-43 100-147 (262)
221 1m6e_X S-adenosyl-L-methionnin 96.1 0.004 1.4E-07 45.1 3.5 56 19-74 121-200 (359)
222 2xyq_A Putative 2'-O-methyl tr 96.1 0.0027 9.3E-08 44.6 2.3 56 17-74 106-162 (290)
223 3p2e_A 16S rRNA methylase; met 96.1 0.00072 2.5E-08 45.1 -0.7 42 1-43 54-105 (225)
224 3hp7_A Hemolysin, putative; st 96.0 0.00092 3.1E-08 47.2 -0.5 59 1-74 114-176 (291)
225 3opn_A Putative hemolysin; str 96.0 0.0004 1.4E-08 46.8 -2.3 54 1-74 66-128 (232)
226 4dmg_A Putative uncharacterize 96.0 0.0014 4.8E-08 47.6 0.4 43 1-43 242-288 (393)
227 3id6_C Fibrillarin-like rRNA/T 95.9 0.018 6E-07 39.1 5.8 44 1-45 107-156 (232)
228 3r3h_A O-methyltransferase, SA 95.9 0.00012 4.1E-09 49.3 -5.2 60 1-74 91-161 (242)
229 2yxl_A PH0851 protein, 450AA l 95.9 0.0075 2.6E-07 44.0 4.0 40 1-41 290-336 (450)
230 2f8l_A Hypothetical protein LM 95.8 0.0097 3.3E-07 41.6 4.0 47 1-49 165-215 (344)
231 4a6d_A Hydroxyindole O-methylt 95.7 0.024 8.1E-07 39.9 5.9 58 5-74 212-274 (353)
232 3tqs_A Ribosomal RNA small sub 95.7 0.0055 1.9E-07 42.0 2.6 41 1-43 57-104 (255)
233 3v97_A Ribosomal RNA large sub 95.7 0.01 3.5E-07 45.9 4.3 67 1-75 262-336 (703)
234 3cbg_A O-methyltransferase; cy 95.7 0.0032 1.1E-07 41.6 1.2 44 1-44 103-157 (232)
235 3c3y_A Pfomt, O-methyltransfer 95.7 0.0018 6.2E-08 43.1 -0.1 42 1-42 101-154 (237)
236 3ajd_A Putative methyltransfer 95.6 0.0014 4.7E-08 44.7 -0.7 41 1-42 114-163 (274)
237 2frx_A Hypothetical protein YE 95.6 0.02 6.8E-07 42.5 5.2 40 1-41 148-193 (479)
238 1qam_A ERMC' methyltransferase 95.5 0.011 3.6E-07 39.8 3.3 44 1-46 58-105 (244)
239 1u2z_A Histone-lysine N-methyl 95.5 0.0044 1.5E-07 45.8 1.5 62 1-74 272-350 (433)
240 2avd_A Catechol-O-methyltransf 95.4 0.00081 2.8E-08 43.7 -2.5 43 1-43 100-153 (229)
241 2igt_A SAM dependent methyltra 95.4 0.0016 5.4E-08 46.1 -1.2 73 1-74 181-263 (332)
242 1qyr_A KSGA, high level kasuga 95.3 0.0056 1.9E-07 41.8 1.3 50 1-51 49-114 (252)
243 2b78_A Hypothetical protein SM 95.1 0.003 1E-07 45.3 -0.5 72 1-74 241-322 (385)
244 3fut_A Dimethyladenosine trans 94.6 0.0084 2.9E-07 41.6 0.8 44 1-45 74-120 (271)
245 3m6w_A RRNA methylase; rRNA me 94.4 0.0065 2.2E-07 45.2 -0.1 40 1-41 132-176 (464)
246 3lec_A NADB-rossmann superfami 94.4 0.013 4.6E-07 39.9 1.4 43 1-44 51-99 (230)
247 1m6y_A S-adenosyl-methyltransf 94.4 0.0074 2.5E-07 42.4 0.0 42 1-43 56-106 (301)
248 3gnl_A Uncharacterized protein 94.2 0.015 5.1E-07 40.0 1.4 43 1-44 51-99 (244)
249 1sqg_A SUN protein, FMU protei 94.2 0.056 1.9E-06 39.0 4.4 40 1-41 276-321 (429)
250 2qfm_A Spermine synthase; sper 94.1 0.011 3.8E-07 43.1 0.5 43 1-43 217-275 (364)
251 3kr9_A SAM-dependent methyltra 94.1 0.017 5.7E-07 39.3 1.4 41 1-43 45-92 (225)
252 3ll7_A Putative methyltransfer 94.0 0.0061 2.1E-07 44.9 -1.1 44 1-44 121-172 (410)
253 1wxx_A TT1595, hypothetical pr 93.9 0.0075 2.6E-07 42.9 -0.7 43 1-43 237-287 (382)
254 2r6z_A UPF0341 protein in RSP 93.6 0.0046 1.6E-07 42.3 -2.2 47 1-47 111-173 (258)
255 2as0_A Hypothetical protein PH 93.5 0.0051 1.8E-07 43.8 -2.2 43 1-43 246-297 (396)
256 3o4f_A Spermidine synthase; am 93.5 0.1 3.5E-06 36.8 4.5 65 1-74 113-189 (294)
257 2nyu_A Putative ribosomal RNA 93.4 0.0066 2.3E-07 38.2 -1.5 56 18-74 72-136 (196)
258 3c0k_A UPF0064 protein YCCW; P 93.3 0.013 4.5E-07 41.8 -0.3 71 1-73 249-329 (396)
259 3uzu_A Ribosomal RNA small sub 93.3 0.031 1E-06 38.7 1.6 42 1-43 74-122 (279)
260 1yub_A Ermam, rRNA methyltrans 93.3 0.005 1.7E-07 41.1 -2.4 41 1-43 57-101 (245)
261 2okc_A Type I restriction enzy 92.9 0.11 3.7E-06 37.7 4.1 44 1-46 214-264 (445)
262 2yx1_A Hypothetical protein MJ 92.9 0.064 2.2E-06 37.5 2.8 39 1-43 222-266 (336)
263 2jjq_A Uncharacterized RNA met 92.8 0.046 1.6E-06 39.9 2.0 40 1-43 318-361 (425)
264 2b9e_A NOL1/NOP2/SUN domain fa 90.8 0.15 5.2E-06 35.6 2.7 40 1-41 133-180 (309)
265 3ftd_A Dimethyladenosine trans 90.1 0.19 6.6E-06 33.9 2.7 41 1-43 60-103 (249)
266 3m4x_A NOL1/NOP2/SUN family pr 89.5 0.037 1.3E-06 41.1 -1.4 41 1-42 136-182 (456)
267 3bt7_A TRNA (uracil-5-)-methyl 89.0 0.053 1.8E-06 38.4 -0.8 42 1-42 241-302 (369)
268 3khk_A Type I restriction-modi 88.8 0.46 1.6E-05 35.8 4.1 45 1-45 289-339 (544)
269 3dou_A Ribosomal RNA large sub 88.6 0.04 1.4E-06 35.6 -1.6 28 17-45 63-101 (191)
270 2p41_A Type II methyltransfera 88.3 0.049 1.7E-06 38.0 -1.4 26 17-45 132-158 (305)
271 2ih2_A Modification methylase 87.6 0.1 3.4E-06 36.7 -0.1 39 1-45 70-108 (421)
272 2ar0_A M.ecoki, type I restric 86.1 0.28 9.5E-06 36.8 1.6 46 1-46 217-272 (541)
273 4hc4_A Protein arginine N-meth 85.2 0.5 1.7E-05 34.1 2.5 41 1-44 112-158 (376)
274 3k6r_A Putative transferase PH 84.2 0.93 3.2E-05 31.4 3.4 41 1-43 154-200 (278)
275 2oyr_A UPF0341 protein YHIQ; a 83.2 0.18 6.3E-06 34.6 -0.5 47 1-47 116-176 (258)
276 2dul_A N(2),N(2)-dimethylguano 78.9 0.34 1.2E-05 34.8 -0.4 42 1-42 77-138 (378)
277 3lkd_A Type I restriction-modi 76.2 2.1 7.1E-05 32.2 3.2 43 1-43 254-305 (542)
278 3c6k_A Spermine synthase; sper 73.1 0.95 3.2E-05 33.1 0.7 73 1-74 234-322 (381)
279 3axs_A Probable N(2),N(2)-dime 70.6 0.72 2.5E-05 33.5 -0.5 43 1-43 83-133 (392)
280 3cvo_A Methyltransferase-like 67.7 3.4 0.00012 27.3 2.4 43 1-43 57-130 (202)
281 1jl3_A Arsenate reductase; alp 57.4 14 0.00049 22.4 3.8 14 3-16 44-57 (139)
282 2qy6_A UPF0209 protein YFCK; s 54.6 3.2 0.00011 28.1 0.5 49 18-74 152-204 (257)
283 2l17_A Synarsc, arsenate reduc 53.4 18 0.00061 21.9 3.8 37 3-42 45-82 (134)
284 3s1s_A Restriction endonucleas 51.3 6 0.00021 31.9 1.6 45 1-45 354-409 (878)
285 1wg8_A Predicted S-adenosylmet 51.0 3.3 0.00011 29.1 0.1 40 1-42 50-96 (285)
286 2k4m_A TR8_protein, UPF0146 pr 47.2 2.5 8.6E-05 27.4 -1.0 39 20-74 74-114 (153)
287 2zig_A TTHA0409, putative modi 45.2 4 0.00014 27.7 -0.3 27 18-44 22-49 (297)
288 1y1l_A Arsenate reductase (ARS 36.3 66 0.0023 18.9 4.6 14 3-16 40-53 (124)
289 1jf8_A Arsenate reductase; ptp 31.6 31 0.0011 20.7 2.3 14 3-16 44-57 (131)
290 2jtt_C Calcyclin-binding prote 30.2 9.1 0.00031 18.8 -0.3 15 57-71 3-17 (35)
291 3rh0_A Arsenate reductase; oxi 30.2 36 0.0012 21.1 2.5 14 3-16 62-75 (148)
292 2cwd_A Low molecular weight ph 29.4 42 0.0014 20.8 2.7 36 3-42 54-90 (161)
293 3p12_A D-ribose pyranase; carb 27.5 1.1E+02 0.0037 19.2 4.4 41 3-43 9-49 (144)
294 2fcg_F Cationic, antibacterial 27.4 25 0.00087 16.1 1.0 12 58-69 8-19 (26)
295 1njr_A 32.1 kDa protein in ADH 25.6 20 0.00069 24.9 0.7 60 1-66 22-97 (284)
296 1rij_A E6APN1 peptide; Trp-CAG 25.4 13 0.00044 16.8 -0.2 13 46-58 8-20 (26)
297 2vz8_A Fatty acid synthase; tr 24.1 6.5 0.00022 34.6 -2.4 46 2-47 1276-1323(2512)
298 3dsa_A D-ribose high-affinity 23.5 1.2E+02 0.0042 18.8 4.1 39 3-43 10-50 (142)
299 1ogd_A High affinity ribose tr 23.2 1.3E+02 0.0044 18.5 4.1 30 3-34 7-36 (131)
300 2wmy_A WZB, putative acid phos 22.9 1.4E+02 0.0046 18.2 4.3 37 3-42 51-88 (150)
301 3ufb_A Type I restriction-modi 22.4 69 0.0024 23.7 3.1 44 1-45 260-312 (530)
302 2wk1_A NOVP; transferase, O-me 22.4 23 0.00079 24.4 0.5 36 7-42 173-216 (282)
303 3cwc_A Putative glycerate kina 20.7 1.2E+02 0.004 22.1 4.0 66 6-73 310-376 (383)
304 3e7n_A D-ribose high-affinity 20.3 1.6E+02 0.0053 18.2 4.1 30 3-34 10-39 (142)
305 3g7u_A Cytosine-specific methy 20.3 2.3E+02 0.0079 19.9 5.4 47 1-48 30-84 (376)
306 3rof_A Low molecular weight pr 20.2 1.2E+02 0.0042 18.8 3.6 38 3-44 55-92 (158)
No 1
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.07 E-value=4.4e-11 Score=76.36 Aligned_cols=62 Identities=10% Similarity=0.058 Sum_probs=52.3
Q ss_pred CCCCHHHHHHHHhcCC-CCcEEEccCCCCCCC---CCCceeeeeeccchhhh-cccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREV-EGDLVLSDLGQGVPF---RAGAFDGAISISALQWL-CNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~-~~~~~~~D~~~~lPf---~~~sFD~v~s~~~l~w~-~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++.. +.+++++|+ +.+|+ .+++||+|+|+.++||+ .++ ..+|+++++.|+
T Consensus 26 vD~s~~ml~~a~~~~~~~~~~~~~d~-~~~~~~~~~~~~fD~V~~~~~l~~~~~~~-----------~~~l~~~~r~Lk 92 (176)
T 2ld4_A 26 VEALKGLVDKLQALTGNEGRVSVENI-KQLLQSAHKESSFDIILSGLVPGSTTLHS-----------AEILAEIARILR 92 (176)
T ss_dssp HHHHHHHHHHHHHHTTTTSEEEEEEG-GGGGGGCCCSSCEEEEEECCSTTCCCCCC-----------HHHHHHHHHHEE
T ss_pred eeCCHHHHHHHHHhcccCcEEEEech-hcCccccCCCCCEeEEEECChhhhcccCH-----------HHHHHHHHHHCC
Confidence 5899999999998863 478999998 57887 89999999999999998 543 568888888875
No 2
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.05 E-value=1.6e-10 Score=77.58 Aligned_cols=62 Identities=21% Similarity=0.182 Sum_probs=50.9
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. .+.+++++|+ +.+||.+++||+|+|+.+++|+.|+ ..+|+++++.|+
T Consensus 65 vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-~~l~~~~~~fD~V~~~~~l~~~~d~-----------~~~l~~~~r~Lk 131 (260)
T 1vl5_A 65 FDLTEDILKVARAFIEGNGHQQVEYVQGDA-EQMPFTDERFHIVTCRIAAHHFPNP-----------ASFVSEAYRVLK 131 (260)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEECCC--CCCSCTTCEEEEEEESCGGGCSCH-----------HHHHHHHHHHEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCceEEEEecH-HhCCCCCCCEEEEEEhhhhHhcCCH-----------HHHHHHHHHHcC
Confidence 599999999998773 3468899997 6799999999999999999999653 357777777765
No 3
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.00 E-value=1.2e-10 Score=80.42 Aligned_cols=60 Identities=13% Similarity=0.170 Sum_probs=50.6
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++ ++..++++|+ +.+|+.+++||+|+++.++||++. .+++++++++|+
T Consensus 67 vD~s~~ml~~a~~~-~~v~~~~~~~-e~~~~~~~sfD~v~~~~~~h~~~~------------~~~~~e~~rvLk 126 (257)
T 4hg2_A 67 VDPGEAQIRQALRH-PRVTYAVAPA-EDTGLPPASVDVAIAAQAMHWFDL------------DRFWAELRRVAR 126 (257)
T ss_dssp EESCHHHHHTCCCC-TTEEEEECCT-TCCCCCSSCEEEEEECSCCTTCCH------------HHHHHHHHHHEE
T ss_pred EeCcHHhhhhhhhc-CCceeehhhh-hhhcccCCcccEEEEeeehhHhhH------------HHHHHHHHHHcC
Confidence 59999999998765 4678999997 789999999999999999999832 247888888775
No 4
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.98 E-value=2.7e-10 Score=75.04 Aligned_cols=64 Identities=13% Similarity=-0.011 Sum_probs=52.7
Q ss_pred CCCCHHHHHHHHhcC-----------------CCCcEEEccCCCCCCCCC-CceeeeeeccchhhhcccCCCCCChHHHH
Q psy4109 1 MKKNAFYTNVARDRE-----------------VEGDLVLSDLGQGVPFRA-GAFDGAISISALQWLCNADKTSHNPAKRL 62 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----------------~~~~~~~~D~~~~lPf~~-~sFD~v~s~~~l~w~~d~~~~~~~p~~~l 62 (77)
+|+|++|++.|+++. .+.+++++|+ ..+|+.+ ++||+|++..+++|+. ....
T Consensus 50 vD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~-~~l~~~~~~~fD~v~~~~~l~~l~---------~~~~ 119 (203)
T 1pjz_A 50 AELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF-FALTARDIGHCAAFYDRAAMIALP---------ADMR 119 (203)
T ss_dssp EEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC-SSSTHHHHHSEEEEEEESCGGGSC---------HHHH
T ss_pred EeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc-ccCCcccCCCEEEEEECcchhhCC---------HHHH
Confidence 599999999998872 3568999998 5798876 8999999999998773 3455
Q ss_pred HHHHHHHHHHHh
Q psy4109 63 YKFFSSLFACLW 74 (77)
Q Consensus 63 ~~~~~~l~~~L~ 74 (77)
.++++++++.|+
T Consensus 120 ~~~l~~~~r~Lk 131 (203)
T 1pjz_A 120 ERYVQHLEALMP 131 (203)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHHcC
Confidence 678999999886
No 5
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.92 E-value=1.4e-09 Score=70.64 Aligned_cols=62 Identities=18% Similarity=0.244 Sum_probs=52.0
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++....+++++|+ ..+|+.+++||+|+++.+++|+.++ .++++++++.|+
T Consensus 62 vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~L~ 123 (211)
T 2gs9_A 62 VEPSEAMLAVGRRRAPEATWVRAWG-EALPFPGESFDVVLLFTTLEFVEDV-----------ERVLLEARRVLR 123 (211)
T ss_dssp ECCCHHHHHHHHHHCTTSEEECCCT-TSCCSCSSCEEEEEEESCTTTCSCH-----------HHHHHHHHHHEE
T ss_pred EeCCHHHHHHHHHhCCCcEEEEccc-ccCCCCCCcEEEEEEcChhhhcCCH-----------HHHHHHHHHHcC
Confidence 5999999999999876678999997 5799999999999999999998542 356777777664
No 6
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.92 E-value=1.5e-09 Score=72.88 Aligned_cols=64 Identities=16% Similarity=0.212 Sum_probs=55.1
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeecc-chhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISIS-ALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~-~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++....+++++|+ ..+|+ +++||+|+++. +++|+.+ ++.+..+++++++.|+
T Consensus 78 vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~-~~~fD~v~~~~~~l~~~~~--------~~~~~~~l~~~~~~L~ 142 (263)
T 3pfg_A 78 LELSADMLAIARRRNPDAVLHHGDM-RDFSL-GRRFSAVTCMFSSIGHLAG--------QAELDAALERFAAHVL 142 (263)
T ss_dssp EESCHHHHHHHHHHCTTSEEEECCT-TTCCC-SCCEEEEEECTTGGGGSCH--------HHHHHHHHHHHHHTEE
T ss_pred EECCHHHHHHHHhhCCCCEEEECCh-HHCCc-cCCcCEEEEcCchhhhcCC--------HHHHHHHHHHHHHhcC
Confidence 5999999999999987789999998 56888 89999999998 9999844 3567788999988875
No 7
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.91 E-value=1.7e-09 Score=73.43 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=51.3
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++..+..++++|+ +.+|+ +++||+|+++.+++|+.|+ ..+++++++.|+
T Consensus 85 vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~-~~~fD~v~~~~~l~~~~d~-----------~~~l~~~~~~Lk 145 (279)
T 3ccf_A 85 TDNAATMIEKARQNYPHLHFDVADA-RNFRV-DKPLDAVFSNAMLHWVKEP-----------EAAIASIHQALK 145 (279)
T ss_dssp EESCHHHHHHHHHHCTTSCEEECCT-TTCCC-SSCEEEEEEESCGGGCSCH-----------HHHHHHHHHHEE
T ss_pred EECCHHHHHHHHhhCCCCEEEECCh-hhCCc-CCCcCEEEEcchhhhCcCH-----------HHHHHHHHHhcC
Confidence 5999999999999877789999997 57887 6899999999999999653 356777777765
No 8
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.90 E-value=1.8e-09 Score=71.73 Aligned_cols=62 Identities=16% Similarity=0.229 Sum_probs=51.4
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. .+.+++++|+ +.+|+.+++||.|+++.++||+.|+ ..+++++++.|+
T Consensus 67 vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~L~ 132 (263)
T 2yqz_A 67 LDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLWHLVPDW-----------PKVLAEAIRVLK 132 (263)
T ss_dssp EESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCGGGCTTH-----------HHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCchhhcCCH-----------HHHHHHHHHHCC
Confidence 599999999999883 4568999997 6799999999999999999999543 457777777765
No 9
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.89 E-value=5.1e-10 Score=72.36 Aligned_cols=64 Identities=9% Similarity=0.074 Sum_probs=54.0
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++..+.+++++|+ ..+|+.+++||+|+++.+++|+.. +.+..+++++++.|+
T Consensus 69 vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~---------~~~~~~l~~~~~~L~ 132 (203)
T 3h2b_A 69 LEPATRLVELARQTHPSVTFHHGTI-TDLSDSPKRWAGLLAWYSLIHMGP---------GELPDALVALRMAVE 132 (203)
T ss_dssp ECCCHHHHHHHHHHCTTSEEECCCG-GGGGGSCCCEEEEEEESSSTTCCT---------TTHHHHHHHHHHTEE
T ss_pred EeCCHHHHHHHHHhCCCCeEEeCcc-cccccCCCCeEEEEehhhHhcCCH---------HHHHHHHHHHHHHcC
Confidence 5999999999999987889999998 579999999999999999998742 234567777777765
No 10
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.88 E-value=1.5e-09 Score=72.19 Aligned_cols=61 Identities=20% Similarity=0.166 Sum_probs=50.2
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++..+.+++++|+ +.+| .+++||.|+++.+++|+.|+ ..+++++++.|+
T Consensus 63 ~D~s~~~~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~L~ 123 (259)
T 2p35_A 63 IDSDDDMLEKAADRLPNTNFGKADL-ATWK-PAQKADLLYANAVFQWVPDH-----------LAVLSQLMDQLE 123 (259)
T ss_dssp EESCHHHHHHHHHHSTTSEEEECCT-TTCC-CSSCEEEEEEESCGGGSTTH-----------HHHHHHHGGGEE
T ss_pred EECCHHHHHHHHHhCCCcEEEECCh-hhcC-ccCCcCEEEEeCchhhCCCH-----------HHHHHHHHHhcC
Confidence 5999999999999877789999997 5688 78999999999999999543 346666666554
No 11
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.88 E-value=2.7e-09 Score=73.53 Aligned_cols=62 Identities=11% Similarity=0.156 Sum_probs=49.7
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++||+.|+++. .+.+++++|+ ..+|+. .||+|++++++||+.+ .....+|++++++|+
T Consensus 102 vD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~-~~~~~~--~~d~v~~~~~l~~~~~---------~~~~~~l~~i~~~Lk 169 (261)
T 4gek_A 102 IDNSPAMIERCRRHIDAYKAPTPVDVIEGDI-RDIAIE--NASMVVLNFTLQFLEP---------SERQALLDKIYQGLN 169 (261)
T ss_dssp EESCHHHHHHHHHHHHTSCCSSCEEEEESCT-TTCCCC--SEEEEEEESCGGGSCH---------HHHHHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHHHhhccCceEEEeeccc-cccccc--ccccceeeeeeeecCc---------hhHhHHHHHHHHHcC
Confidence 599999999999873 1357899998 568874 5999999999998843 334568999999886
No 12
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.86 E-value=9.6e-10 Score=74.32 Aligned_cols=61 Identities=15% Similarity=0.174 Sum_probs=51.9
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++. +.+++++|+ +.+|+.+++||.|+++.+++|+.|+ .++++++++.|+
T Consensus 62 vD~s~~~~~~a~~~~-~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~Lk 122 (261)
T 3ege_A 62 VEPSIVMRQQAVVHP-QVEWFTGYA-ENLALPDKSVDGVISILAIHHFSHL-----------EKSFQEMQRIIR 122 (261)
T ss_dssp ECSCHHHHHSSCCCT-TEEEECCCT-TSCCSCTTCBSEEEEESCGGGCSSH-----------HHHHHHHHHHBC
T ss_pred EeCCHHHHHHHHhcc-CCEEEECch-hhCCCCCCCEeEEEEcchHhhccCH-----------HHHHHHHHHHhC
Confidence 599999999998876 678999998 6799999999999999999998553 467777777765
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.86 E-value=4.5e-09 Score=69.82 Aligned_cols=64 Identities=20% Similarity=0.168 Sum_probs=54.3
Q ss_pred CCCCHHHHHHHHhcC---CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE---VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. ...+++++|+ ..+|+.+++||+|+++.+++|+ +......+++++++.|+
T Consensus 84 vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~---------~~~~~~~~l~~~~~~L~ 150 (266)
T 3ujc_A 84 IDICSNIVNMANERVSGNNKIIFEANDI-LTKEFPENNFDLIYSRDAILAL---------SLENKNKLFQKCYKWLK 150 (266)
T ss_dssp EESCHHHHHHHHHTCCSCTTEEEEECCT-TTCCCCTTCEEEEEEESCGGGS---------CHHHHHHHHHHHHHHEE
T ss_pred EeCCHHHHHHHHHHhhcCCCeEEEECcc-ccCCCCCCcEEEEeHHHHHHhc---------ChHHHHHHHHHHHHHcC
Confidence 599999999999887 3568899997 5789999999999999999987 23556788888888875
No 14
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.85 E-value=3.5e-09 Score=68.23 Aligned_cols=62 Identities=13% Similarity=0.176 Sum_probs=50.6
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. ...+++++|+ ..+|+.+++||+|+++.+++|+.++ ..+++++++.|+
T Consensus 72 ~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~v~~~~~l~~~~~~-----------~~~l~~~~~~L~ 139 (219)
T 3dlc_A 72 LDFSKHMNEIALKNIADANLNDRIQIVQGDV-HNIPIEDNYADLIVSRGSVFFWEDV-----------ATAFREIYRILK 139 (219)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECBT-TBCSSCTTCEEEEEEESCGGGCSCH-----------HHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHHHhccccCceEEEEcCH-HHCCCCcccccEEEECchHhhccCH-----------HHHHHHHHHhCC
Confidence 599999999999883 2468899998 5799999999999999999998543 457777777664
No 15
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.82 E-value=3.7e-09 Score=70.50 Aligned_cols=62 Identities=15% Similarity=0.108 Sum_probs=50.7
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. .+.+++++|+ +.+|+.+++||+|++..+++|+.|+ ..+++++++.|+
T Consensus 49 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~Lk 115 (239)
T 1xxl_A 49 VDATKEMVEVASSFAQEKGVENVRFQQGTA-ESLPFPDDSFDIITCRYAAHHFSDV-----------RKAVREVARVLK 115 (239)
T ss_dssp EESCHHHHHHHHHHHHHHTCCSEEEEECBT-TBCCSCTTCEEEEEEESCGGGCSCH-----------HHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCeEEEeccc-ccCCCCCCcEEEEEECCchhhccCH-----------HHHHHHHHHHcC
Confidence 599999999998763 3468899997 6799999999999999999998543 456777777665
No 16
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.81 E-value=3.8e-09 Score=70.43 Aligned_cols=62 Identities=10% Similarity=0.136 Sum_probs=52.2
Q ss_pred CCCCHHHHHHHHhcCC--CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREV--EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++.. ..+++++|+ ..+|+.+++||+|+++.+++|+.++ .++++++++.|+
T Consensus 73 vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~Lk 136 (253)
T 3g5l_A 73 IDLSERMLTEAKRKTTSPVVCYEQKAI-EDIAIEPDAYNVVLSSLALHYIASF-----------DDICKKVYINLK 136 (253)
T ss_dssp EESCHHHHHHHHHHCCCTTEEEEECCG-GGCCCCTTCEEEEEEESCGGGCSCH-----------HHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHhhccCCeEEEEcch-hhCCCCCCCeEEEEEchhhhhhhhH-----------HHHHHHHHHHcC
Confidence 5999999999998863 468999998 5799999999999999999998543 567788887775
No 17
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.81 E-value=4.4e-09 Score=71.72 Aligned_cols=62 Identities=11% Similarity=0.073 Sum_probs=51.5
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. ...+++++|+ ..+|+.+++||+|+++.+++|+.+ ..++|+++++.|+
T Consensus 111 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~-----------~~~~l~~~~~~Lk 178 (297)
T 2o57_A 111 LNIAPVQNKRNEEYNNQAGLADNITVKYGSF-LEIPCEDNSYDFIWSQDAFLHSPD-----------KLKVFQECARVLK 178 (297)
T ss_dssp EESCHHHHHHHHHHHHHHTCTTTEEEEECCT-TSCSSCTTCEEEEEEESCGGGCSC-----------HHHHHHHHHHHEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCcceEEEEcCc-ccCCCCCCCEeEEEecchhhhcCC-----------HHHHHHHHHHHcC
Confidence 599999999998764 2468899998 579999999999999999999854 2567788887775
No 18
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.79 E-value=7.2e-09 Score=67.47 Aligned_cols=64 Identities=14% Similarity=0.103 Sum_probs=52.9
Q ss_pred CCCCHHHHHHHHhcCC---CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREV---EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~---~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++.. ..+++++|+ ..+| .+++||+|+++.+++|+.++ +.++++++++++.|+
T Consensus 79 vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~~~--------~~~~~~l~~~~~~L~ 145 (216)
T 3ofk_A 79 IDVMPRAIGRACQRTKRWSHISWAATDI-LQFS-TAELFDLIVVAEVLYYLEDM--------TQMRTAIDNMVKMLA 145 (216)
T ss_dssp EESCHHHHHHHHHHTTTCSSEEEEECCT-TTCC-CSCCEEEEEEESCGGGSSSH--------HHHHHHHHHHHHTEE
T ss_pred EECCHHHHHHHHHhcccCCCeEEEEcch-hhCC-CCCCccEEEEccHHHhCCCH--------HHHHHHHHHHHHHcC
Confidence 5999999999998863 358999998 5677 68999999999999998653 456778888888775
No 19
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.79 E-value=1.4e-08 Score=65.54 Aligned_cols=64 Identities=9% Similarity=0.150 Sum_probs=53.3
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. ...+++++|+ ..+|+.+++||+|+++.+++|+ +.+....+++++++.|+
T Consensus 52 vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~---------~~~~~~~~l~~~~~~Lk 119 (209)
T 2p8j_A 52 IEISDLQLKKAENFSRENNFKLNISKGDI-RKLPFKDESMSFVYSYGTIFHM---------RKNDVKEAIDEIKRVLK 119 (209)
T ss_dssp EECCHHHHHHHHHHHHHHTCCCCEEECCT-TSCCSCTTCEEEEEECSCGGGS---------CHHHHHHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHHHhcCCceEEEECch-hhCCCCCCceeEEEEcChHHhC---------CHHHHHHHHHHHHHHcC
Confidence 599999999998763 4578999998 5799999999999999999876 24556788889888875
No 20
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.79 E-value=5.8e-09 Score=68.70 Aligned_cols=62 Identities=16% Similarity=0.393 Sum_probs=51.7
Q ss_pred CCCCHHHHHHHHhcC--CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE--VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~--~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++. .+.+++++|+ ..+|+.+++||+|+++.+++|+.++ ..+++++++.|+
T Consensus 81 vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~L~ 144 (242)
T 3l8d_A 81 VDISEVMIQKGKERGEGPDLSFIKGDL-SSLPFENEQFEAIMAINSLEWTEEP-----------LRALNEIKRVLK 144 (242)
T ss_dssp EESCHHHHHHHHTTTCBTTEEEEECBT-TBCSSCTTCEEEEEEESCTTSSSCH-----------HHHHHHHHHHEE
T ss_pred EECCHHHHHHHHhhcccCCceEEEcch-hcCCCCCCCccEEEEcChHhhccCH-----------HHHHHHHHHHhC
Confidence 599999999999884 3568999997 5799999999999999999998543 357777777765
No 21
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.78 E-value=5.1e-09 Score=68.21 Aligned_cols=64 Identities=13% Similarity=0.093 Sum_probs=52.9
Q ss_pred CCCCHHHHHHHHhcCC-CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHhh
Q psy4109 1 MKKNAFYTNVARDREV-EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLWS 75 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~-~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~~ 75 (77)
+|+|++|++.|+++.. +.+++++|+ ..+|+. ++||+|+++.+++|+.++ ....+++++++.|+.
T Consensus 73 vD~s~~~~~~a~~~~~~~~~~~~~d~-~~~~~~-~~fD~v~~~~~l~~~~~~---------~~~~~l~~~~~~Lkp 137 (220)
T 3hnr_A 73 IEPSREMRMIAKEKLPKEFSITEGDF-LSFEVP-TSIDTIVSTYAFHHLTDD---------EKNVAIAKYSQLLNK 137 (220)
T ss_dssp ECSCHHHHHHHHHHSCTTCCEESCCS-SSCCCC-SCCSEEEEESCGGGSCHH---------HHHHHHHHHHHHSCT
T ss_pred EeCCHHHHHHHHHhCCCceEEEeCCh-hhcCCC-CCeEEEEECcchhcCChH---------HHHHHHHHHHHhcCC
Confidence 5999999999999876 678999998 578887 999999999999998553 224578888887753
No 22
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.78 E-value=6.1e-09 Score=71.45 Aligned_cols=61 Identities=18% Similarity=0.182 Sum_probs=51.3
Q ss_pred CCCCHHHHHHHHhc-------CCCCcEEEccCCCCCCCCC------CceeeeeeccchhhhcccCCCCCChHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDR-------EVEGDLVLSDLGQGVPFRA------GAFDGAISISALQWLCNADKTSHNPAKRLYKFFS 67 (77)
Q Consensus 1 iDiS~~ML~~A~~r-------~~~~~~~~~D~~~~lPf~~------~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~ 67 (77)
+|+|+.|++.|+++ ..+.+++++|+ +.+|+.+ ++||+|+++.++||+ ++ .++++
T Consensus 67 vD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~-----------~~~l~ 133 (299)
T 3g5t_A 67 SDLSATMIKTAEVIKEGSPDTYKNVSFKISSS-DDFKFLGADSVDKQKIDMITAVECAHWF-DF-----------EKFQR 133 (299)
T ss_dssp EESCHHHHHHHHHHHHHCC-CCTTEEEEECCT-TCCGGGCTTTTTSSCEEEEEEESCGGGS-CH-----------HHHHH
T ss_pred EeCCHHHHHHHHHHHHhccCCCCceEEEEcCH-HhCCccccccccCCCeeEEeHhhHHHHh-CH-----------HHHHH
Confidence 59999999999987 34568999998 6788888 899999999999998 43 46888
Q ss_pred HHHHHHh
Q psy4109 68 SLFACLW 74 (77)
Q Consensus 68 ~l~~~L~ 74 (77)
++++.|+
T Consensus 134 ~~~~~Lk 140 (299)
T 3g5t_A 134 SAYANLR 140 (299)
T ss_dssp HHHHHEE
T ss_pred HHHHhcC
Confidence 8888775
No 23
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.77 E-value=7.5e-09 Score=74.08 Aligned_cols=62 Identities=15% Similarity=0.092 Sum_probs=51.8
Q ss_pred CCCCHHHHHHHHhc---------C----CCCcEEEccCCCCC------CCCCCceeeeeeccchhhhcccCCCCCChHHH
Q psy4109 1 MKKNAFYTNVARDR---------E----VEGDLVLSDLGQGV------PFRAGAFDGAISISALQWLCNADKTSHNPAKR 61 (77)
Q Consensus 1 iDiS~~ML~~A~~r---------~----~~~~~~~~D~~~~l------Pf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~ 61 (77)
+|+|++|++.|+++ + .+.+++++|+ +.+ |+.+++||+|+|+.+++|+.|+
T Consensus 114 vD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~-~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~---------- 182 (383)
T 4fsd_A 114 VDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFI-ENLATAEPEGVPDSSVDIVISNCVCNLSTNK---------- 182 (383)
T ss_dssp EECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCT-TCGGGCBSCCCCTTCEEEEEEESCGGGCSCH----------
T ss_pred EECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccH-HHhhhcccCCCCCCCEEEEEEccchhcCCCH----------
Confidence 59999999999987 3 4578999998 566 9999999999999999998553
Q ss_pred HHHHHHHHHHHHh
Q psy4109 62 LYKFFSSLFACLW 74 (77)
Q Consensus 62 l~~~~~~l~~~L~ 74 (77)
..+++++++.|+
T Consensus 183 -~~~l~~~~r~Lk 194 (383)
T 4fsd_A 183 -LALFKEIHRVLR 194 (383)
T ss_dssp -HHHHHHHHHHEE
T ss_pred -HHHHHHHHHHcC
Confidence 467788888775
No 24
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.75 E-value=1.4e-08 Score=66.62 Aligned_cols=64 Identities=17% Similarity=0.201 Sum_probs=52.5
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeecc-chhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISIS-ALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~-~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++....+++++|+ ..+|+ +++||+|+|+. +++|+.++ +.+..+++++++.|+
T Consensus 68 ~D~s~~~~~~a~~~~~~~~~~~~d~-~~~~~-~~~~D~v~~~~~~~~~~~~~--------~~~~~~l~~~~~~L~ 132 (239)
T 3bxo_A 68 LELSEDMLTHARKRLPDATLHQGDM-RDFRL-GRKFSAVVSMFSSVGYLKTT--------EELGAAVASFAEHLE 132 (239)
T ss_dssp EESCHHHHHHHHHHCTTCEEEECCT-TTCCC-SSCEEEEEECTTGGGGCCSH--------HHHHHHHHHHHHTEE
T ss_pred EeCCHHHHHHHHHhCCCCEEEECCH-HHccc-CCCCcEEEEcCchHhhcCCH--------HHHHHHHHHHHHhcC
Confidence 5999999999999987789999998 56887 88999999654 99988442 456778888888775
No 25
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.75 E-value=3.5e-09 Score=72.66 Aligned_cols=64 Identities=13% Similarity=0.066 Sum_probs=50.8
Q ss_pred CCCCHHHHHHHHhcC----------------------CCCcEEEccCCCCCCCCC-CceeeeeeccchhhhcccCCCCCC
Q psy4109 1 MKKNAFYTNVARDRE----------------------VEGDLVLSDLGQGVPFRA-GAFDGAISISALQWLCNADKTSHN 57 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----------------------~~~~~~~~D~~~~lPf~~-~sFD~v~s~~~l~w~~d~~~~~~~ 57 (77)
+|+|+.|++.|+++. ...+++++|+ ..+|+.+ ++||+|++..+++++..
T Consensus 96 vD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~-~~l~~~~~~~FD~V~~~~~l~~l~~------- 167 (252)
T 2gb4_A 96 VEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI-FDLPRANIGKFDRIWDRGALVAINP------- 167 (252)
T ss_dssp ECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT-TTGGGGCCCCEEEEEESSSTTTSCG-------
T ss_pred EECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc-ccCCcccCCCEEEEEEhhhhhhCCH-------
Confidence 699999999997653 2458999998 5788875 89999999999988742
Q ss_pred hHHHHHHHHHHHHHHHh
Q psy4109 58 PAKRLYKFFSSLFACLW 74 (77)
Q Consensus 58 p~~~l~~~~~~l~~~L~ 74 (77)
....++++++++.|+
T Consensus 168 --~~~~~~l~~~~~~Lk 182 (252)
T 2gb4_A 168 --GDHDRYADIILSLLR 182 (252)
T ss_dssp --GGHHHHHHHHHHTEE
T ss_pred --HHHHHHHHHHHHHcC
Confidence 234568888888775
No 26
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.73 E-value=1.1e-08 Score=67.87 Aligned_cols=64 Identities=14% Similarity=0.221 Sum_probs=53.6
Q ss_pred CCCCHHHHHHHHhcCC---CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREV---EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~---~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++.. ..+++++|+ ..+|+.+++||+|++..+++|+. .+.+..+++++++.|+
T Consensus 122 vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~---------~~~~~~~l~~~~~~Lk 188 (254)
T 1xtp_A 122 LEPVKHMLEEAKRELAGMPVGKFILASM-ETATLPPNTYDLIVIQWTAIYLT---------DADFVKFFKHCQQALT 188 (254)
T ss_dssp EESCHHHHHHHHHHTTTSSEEEEEESCG-GGCCCCSSCEEEEEEESCGGGSC---------HHHHHHHHHHHHHHEE
T ss_pred EeCCHHHHHHHHHHhccCCceEEEEccH-HHCCCCCCCeEEEEEcchhhhCC---------HHHHHHHHHHHHHhcC
Confidence 5899999999998863 468899997 56899999999999999998873 2456788888888875
No 27
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.72 E-value=2.1e-09 Score=73.83 Aligned_cols=62 Identities=8% Similarity=-0.084 Sum_probs=44.6
Q ss_pred CCCCHHHHHHHHhcCC------CC--cEEEccCCCCCC------CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV------EG--DLVLSDLGQGVP------FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFF 66 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~------~~--~~~~~D~~~~lP------f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~ 66 (77)
+|+|++|++.|+++.. +. .+..+|+ +.++ |.+++||+|+++.++||++|+ ..++
T Consensus 88 vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~-----------~~~l 155 (292)
T 2aot_A 88 VEPSAEQIAKYKELVAKTSNLENVKFAWHKETS-SEYQSRMLEKKELQKWDFIHMIQMLYYVKDI-----------PATL 155 (292)
T ss_dssp ECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCH-HHHHHHHHTTTCCCCEEEEEEESCGGGCSCH-----------HHHH
T ss_pred EeCCHHHHHHHHHHHHhccCCCcceEEEEecch-hhhhhhhccccCCCceeEEEEeeeeeecCCH-----------HHHH
Confidence 5999999999988731 11 3344554 3343 678999999999999999764 3467
Q ss_pred HHHHHHHh
Q psy4109 67 SSLFACLW 74 (77)
Q Consensus 67 ~~l~~~L~ 74 (77)
+++++.|+
T Consensus 156 ~~~~r~Lk 163 (292)
T 2aot_A 156 KFFHSLLG 163 (292)
T ss_dssp HHHHHTEE
T ss_pred HHHHHHcC
Confidence 77777664
No 28
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.72 E-value=1.2e-08 Score=66.32 Aligned_cols=62 Identities=15% Similarity=0.146 Sum_probs=51.4
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. .+.+++++|+ ..+|+.+++||+|+++.+++|+.++ ..+++++++.|+
T Consensus 68 vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~Lk 134 (219)
T 3dh0_A 68 IDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NKIPLPDNTVDFIFMAFTFHELSEP-----------LKFLEELKRVAK 134 (219)
T ss_dssp EESCHHHHHHHHHHHHHHTCTTEEEEECBT-TBCSSCSSCEEEEEEESCGGGCSSH-----------HHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHHHHcCCCcEEEEeccc-ccCCCCCCCeeEEEeehhhhhcCCH-----------HHHHHHHHHHhC
Confidence 599999999998874 2468899997 6789999999999999999998543 467777777775
No 29
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.72 E-value=6.7e-09 Score=67.94 Aligned_cols=61 Identities=10% Similarity=0.074 Sum_probs=48.8
Q ss_pred CCCCHHHHHHHHhcCC-CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHH-HHHh
Q psy4109 1 MKKNAFYTNVARDREV-EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLF-ACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~-~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~-~~L~ 74 (77)
+|+|++|++.|+++.. ..+++++|+ +.+ +.+++||+|+++.+++|+.|+ ..++++++ +.|+
T Consensus 70 vD~s~~~~~~a~~~~~~~v~~~~~d~-~~~-~~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~~Lk 132 (250)
T 2p7i_A 70 VEASEEAISHAQGRLKDGITYIHSRF-EDA-QLPRRYDNIVLTHVLEHIDDP-----------VALLKRINDDWLA 132 (250)
T ss_dssp EESCHHHHHHHHHHSCSCEEEEESCG-GGC-CCSSCEEEEEEESCGGGCSSH-----------HHHHHHHHHTTEE
T ss_pred EeCCHHHHHHHHHhhhCCeEEEEccH-HHc-CcCCcccEEEEhhHHHhhcCH-----------HHHHHHHHHHhcC
Confidence 5999999999999875 578899998 445 478999999999999999553 35666676 6554
No 30
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.70 E-value=9.5e-09 Score=67.16 Aligned_cols=64 Identities=25% Similarity=0.199 Sum_probs=53.0
Q ss_pred CCCCHHHHHHHHhcCC----------CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV----------EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLF 70 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~----------~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~ 70 (77)
+|+|++|++.|+++.. ..+++++|+ ..+|+.+++||+|+++.+++|+.+ ..+.+++++++
T Consensus 59 vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~~~~~l~~~~~---------~~~~~~l~~~~ 128 (219)
T 3jwg_A 59 VDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDAATVIEVIEHLDE---------NRLQAFEKVLF 128 (219)
T ss_dssp EESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSEEEEESCGGGCCH---------HHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCEEEEHHHHHhCCH---------HHHHHHHHHHH
Confidence 5999999999998742 468999998 678888999999999999998843 34667888888
Q ss_pred HHHh
Q psy4109 71 ACLW 74 (77)
Q Consensus 71 ~~L~ 74 (77)
+.|+
T Consensus 129 ~~Lk 132 (219)
T 3jwg_A 129 EFTR 132 (219)
T ss_dssp TTTC
T ss_pred HhhC
Confidence 7775
No 31
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.70 E-value=8.3e-09 Score=68.59 Aligned_cols=61 Identities=16% Similarity=0.067 Sum_probs=48.1
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. .+.+++++|+ ..+|+ +++||+|+|..+++|+.++ ..+++++++.|+
T Consensus 65 vD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~-~~~~~-~~~fD~V~~~~~~~~~~~~-----------~~~l~~~~r~Lk 131 (256)
T 1nkv_A 65 IDMSSLFTAQAKRRAEELGVSERVHFIHNDA-AGYVA-NEKCDVAACVGATWIAGGF-----------AGAEELLAQSLK 131 (256)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEESCC-TTCCC-SSCEEEEEEESCGGGTSSS-----------HHHHHHHTTSEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCcceEEEECCh-HhCCc-CCCCCEEEECCChHhcCCH-----------HHHHHHHHHHcC
Confidence 599999999998764 2468899998 56888 8999999999999998643 446666666554
No 32
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.70 E-value=1.6e-08 Score=63.65 Aligned_cols=59 Identities=7% Similarity=-0.042 Sum_probs=49.6
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++....+++++| +|+.+++||.|+++.+++|+.++ ..+++++++.|+
T Consensus 45 vD~s~~~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~~~~-----------~~~l~~~~~~L~ 103 (170)
T 3i9f_A 45 IDINVIALKEVKEKFDSVITLSDP----KEIPDNSVDFILFANSFHDMDDK-----------QHVISEVKRILK 103 (170)
T ss_dssp ECSCHHHHHHHHHHCTTSEEESSG----GGSCTTCEEEEEEESCSTTCSCH-----------HHHHHHHHHHEE
T ss_pred EeCCHHHHHHHHHhCCCcEEEeCC----CCCCCCceEEEEEccchhcccCH-----------HHHHHHHHHhcC
Confidence 599999999999987678888888 68889999999999999998542 467777777765
No 33
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.70 E-value=2.7e-08 Score=64.74 Aligned_cols=65 Identities=15% Similarity=0.224 Sum_probs=53.1
Q ss_pred CCCCHHHHHHHHhcCC----------CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV----------EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLF 70 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~----------~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~ 70 (77)
+|+|+.|++.|+++.. ..+++++|+ ..+|+.+++||+|+++.+++|+.++ +....++++++
T Consensus 58 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~v~~~~~l~~~~~~--------~~~~~~l~~~~ 128 (235)
T 3sm3_A 58 IDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA-SSLSFHDSSFDFAVMQAFLTSVPDP--------KERSRIIKEVF 128 (235)
T ss_dssp EESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT-TSCCSCTTCEEEEEEESCGGGCCCH--------HHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHhcCCccccCcceEEEEecc-cccCCCCCceeEEEEcchhhcCCCH--------HHHHHHHHHHH
Confidence 5999999999998652 247899997 5799999999999999999998653 34557888888
Q ss_pred HHHh
Q psy4109 71 ACLW 74 (77)
Q Consensus 71 ~~L~ 74 (77)
+.|+
T Consensus 129 ~~L~ 132 (235)
T 3sm3_A 129 RVLK 132 (235)
T ss_dssp HHEE
T ss_pred HHcC
Confidence 8775
No 34
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.70 E-value=2.8e-08 Score=64.20 Aligned_cols=63 Identities=14% Similarity=0.089 Sum_probs=52.5
Q ss_pred CCCCHHHHHHHHhcC-CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE-VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|++++ .+.+++++|+ ..+ +.+++||+|+++.+++|+.+ ..+..+++++++.|+
T Consensus 74 ~D~s~~~~~~a~~~~~~~~~~~~~d~-~~~-~~~~~~D~v~~~~~l~~~~~---------~~~~~~l~~~~~~L~ 137 (218)
T 3ou2_A 74 LDGSAEMIAEAGRHGLDNVEFRQQDL-FDW-TPDRQWDAVFFAHWLAHVPD---------DRFEAFWESVRSAVA 137 (218)
T ss_dssp EESCHHHHHHHGGGCCTTEEEEECCT-TSC-CCSSCEEEEEEESCGGGSCH---------HHHHHHHHHHHHHEE
T ss_pred EeCCHHHHHHHHhcCCCCeEEEeccc-ccC-CCCCceeEEEEechhhcCCH---------HHHHHHHHHHHHHcC
Confidence 599999999999876 5578999998 455 78999999999999998743 456778888888875
No 35
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.69 E-value=1.2e-08 Score=68.53 Aligned_cols=62 Identities=16% Similarity=0.262 Sum_probs=50.1
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. . ..+++++|+ ..+|+.+++||+|+|+.+++|+.++ ..+|+++++.|+
T Consensus 90 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~L~ 157 (273)
T 3bus_A 90 ISISRPQVNQANARATAAGLANRVTFSYADA-MDLPFEDASFDAVWALESLHHMPDR-----------GRALREMARVLR 157 (273)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCSCTTCEEEEEEESCTTTSSCH-----------HHHHHHHHTTEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCcceEEEECcc-ccCCCCCCCccEEEEechhhhCCCH-----------HHHHHHHHHHcC
Confidence 589999999998773 1 368899997 5799999999999999999998553 456777776654
No 36
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.69 E-value=2.5e-08 Score=65.47 Aligned_cols=60 Identities=13% Similarity=0.269 Sum_probs=50.0
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++ ..+++++|+ ..+|+.+++||+|+++.+++|+.++ ..+++++++.|+
T Consensus 71 vD~s~~~~~~a~~~--~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~L~ 130 (219)
T 1vlm_A 71 VEPSERMAEIARKR--GVFVLKGTA-ENLPLKDESFDFALMVTTICFVDDP-----------ERALKEAYRILK 130 (219)
T ss_dssp EESCHHHHHHHHHT--TCEEEECBT-TBCCSCTTCEEEEEEESCGGGSSCH-----------HHHHHHHHHHEE
T ss_pred cCCCHHHHHHHHhc--CCEEEEccc-ccCCCCCCCeeEEEEcchHhhccCH-----------HHHHHHHHHHcC
Confidence 58999999999998 478899997 5789999999999999999998543 357777777664
No 37
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.69 E-value=6.7e-09 Score=68.35 Aligned_cols=63 Identities=13% Similarity=0.205 Sum_probs=51.7
Q ss_pred CCCCHHHHHHHHhcCC---CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREV---EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~---~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++.. ..+++++|+ ..+|+. ++||+|+++.+++|+.++ ....+++++++.|+
T Consensus 74 vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~~~~-~~fD~v~~~~~l~~~~~~---------~~~~~l~~~~~~Lk 139 (234)
T 3dtn_A 74 VDMSEKMLEIAKNRFRGNLKVKYIEADY-SKYDFE-EKYDMVVSALSIHHLEDE---------DKKELYKRSYSILK 139 (234)
T ss_dssp EESCHHHHHHHHHHTCSCTTEEEEESCT-TTCCCC-SCEEEEEEESCGGGSCHH---------HHHHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHhhccCCCEEEEeCch-hccCCC-CCceEEEEeCccccCCHH---------HHHHHHHHHHHhcC
Confidence 5999999999998864 468899998 578877 899999999999988543 34568888888875
No 38
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.66 E-value=1.5e-08 Score=66.26 Aligned_cols=64 Identities=22% Similarity=0.160 Sum_probs=52.4
Q ss_pred CCCCHHHHHHHHhcCC----------CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV----------EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLF 70 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~----------~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~ 70 (77)
+|+|++|++.|+++.. ..+++++|+ ..+++.+++||+|+++.+++|+.+ ..+.+++++++
T Consensus 59 vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~---------~~~~~~l~~~~ 128 (217)
T 3jwh_A 59 VDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL-TYQDKRFHGYDAATVIEVIEHLDL---------SRLGAFERVLF 128 (217)
T ss_dssp EESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT-TSCCGGGCSCSEEEEESCGGGCCH---------HHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc-ccccccCCCcCEEeeHHHHHcCCH---------HHHHHHHHHHH
Confidence 5999999999998742 468999997 567888899999999999998843 35667888888
Q ss_pred HHHh
Q psy4109 71 ACLW 74 (77)
Q Consensus 71 ~~L~ 74 (77)
+.|+
T Consensus 129 ~~Lk 132 (217)
T 3jwh_A 129 EFAQ 132 (217)
T ss_dssp TTTC
T ss_pred HHcC
Confidence 7775
No 39
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.66 E-value=9.3e-09 Score=69.84 Aligned_cols=62 Identities=15% Similarity=0.217 Sum_probs=49.9
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCC-CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVP-FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lP-f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|++|++.|+++. ...+++++|+ ..+| +.+++||+|+++.+++|+.++ ..+++++++.|
T Consensus 96 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~L 163 (285)
T 4htf_A 96 CDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA-QDVASHLETPVDLILFHAVLEWVADP-----------RSVLQTLWSVL 163 (285)
T ss_dssp EESCHHHHHHHHHHHHC-CCGGGEEEEESCG-GGTGGGCSSCEEEEEEESCGGGCSCH-----------HHHHHHHHHTE
T ss_pred EECCHHHHHHHHHHHHhcCCCcceEEEEcCH-HHhhhhcCCCceEEEECchhhcccCH-----------HHHHHHHHHHc
Confidence 599999999999874 2357899998 4566 889999999999999999553 35777777766
Q ss_pred h
Q psy4109 74 W 74 (77)
Q Consensus 74 ~ 74 (77)
+
T Consensus 164 k 164 (285)
T 4htf_A 164 R 164 (285)
T ss_dssp E
T ss_pred C
Confidence 4
No 40
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.65 E-value=2.6e-08 Score=65.46 Aligned_cols=62 Identities=19% Similarity=0.200 Sum_probs=51.0
Q ss_pred CCCCHHHHHHHHhcCC--CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREV--EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++.. ..+++++|+ ..+|+.+++||+|+++.+++|+.+ ...+++++++.|+
T Consensus 72 vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~-----------~~~~l~~~~~~L~ 135 (243)
T 3bkw_A 72 LDLSEKMLARARAAGPDTGITYERADL-DKLHLPQDSFDLAYSSLALHYVED-----------VARLFRTVHQALS 135 (243)
T ss_dssp EESCHHHHHHHHHTSCSSSEEEEECCG-GGCCCCTTCEEEEEEESCGGGCSC-----------HHHHHHHHHHHEE
T ss_pred EcCCHHHHHHHHHhcccCCceEEEcCh-hhccCCCCCceEEEEeccccccch-----------HHHHHHHHHHhcC
Confidence 5999999999998864 357899998 568888999999999999999853 2467777777765
No 41
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.65 E-value=2.4e-08 Score=68.17 Aligned_cols=67 Identities=12% Similarity=0.023 Sum_probs=48.0
Q ss_pred CCCCHHHHHHHHhcCCC-----------------------------------CcEEEccCCCCCCC-----CCCceeeee
Q psy4109 1 MKKNAFYTNVARDREVE-----------------------------------GDLVLSDLGQGVPF-----RAGAFDGAI 40 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~-----------------------------------~~~~~~D~~~~lPf-----~~~sFD~v~ 40 (77)
+|+|++|++.|+++... .+++++|+.+.+|+ .+++||+|+
T Consensus 100 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~ 179 (289)
T 2g72_A 100 TDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALV 179 (289)
T ss_dssp ECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEE
T ss_pred eCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEE
Confidence 69999999999874210 23566798544775 456799999
Q ss_pred eccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 41 SISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 41 s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
|+.+++|+... ...+..+|+++++.|+
T Consensus 180 ~~~~l~~~~~~-------~~~~~~~l~~~~r~Lk 206 (289)
T 2g72_A 180 SAFCLEAVSPD-------LASFQRALDHITTLLR 206 (289)
T ss_dssp EESCHHHHCSS-------HHHHHHHHHHHHTTEE
T ss_pred ehhhhhhhcCC-------HHHHHHHHHHHHHhcC
Confidence 99999996321 2455678888888775
No 42
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.65 E-value=1.7e-08 Score=67.97 Aligned_cols=61 Identities=11% Similarity=0.083 Sum_probs=49.2
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. ...+++++|+ ..+|+.+++||.|+|+.+++|+ ++ ..+++++++.|+
T Consensus 75 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~~~~~~-~~-----------~~~l~~~~~~Lk 141 (267)
T 3kkz_A 75 LDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEGAIYNI-GF-----------ERGLNEWRKYLK 141 (267)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESSCGGGT-CH-----------HHHHHHHGGGEE
T ss_pred EeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcCCceec-CH-----------HHHHHHHHHHcC
Confidence 599999999998874 2368999998 6799999999999999999988 32 346666666654
No 43
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.64 E-value=2e-08 Score=67.63 Aligned_cols=62 Identities=18% Similarity=0.214 Sum_probs=51.2
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++. .+.+++++|+ ..+|+.+++||+|+++.+++|+.++ ..+++++++.|+
T Consensus 67 vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~L~ 133 (276)
T 3mgg_A 67 IDISPESLEKARENTEKNGIKNVKFLQANI-FSLPFEDSSFDHIFVCFVLEHLQSP-----------EEALKSLKKVLK 133 (276)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEECCG-GGCCSCTTCEEEEEEESCGGGCSCH-----------HHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEccc-ccCCCCCCCeeEEEEechhhhcCCH-----------HHHHHHHHHHcC
Confidence 599999999998873 2468899997 5799999999999999999999654 357777777765
No 44
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.63 E-value=6.1e-08 Score=62.29 Aligned_cols=73 Identities=12% Similarity=0.137 Sum_probs=56.4
Q ss_pred CCCCHHHHHHHHhcC---CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCC----CCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE---VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKT----SHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~----~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|+.|++.|+++. ...+++++|+ ..+|+.+++||+|+++.+++++...... .+........+++++++.|
T Consensus 71 ~D~s~~~~~~a~~~~~~~~~i~~~~~d~-~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 149 (215)
T 2pxx_A 71 VDYSSVVVAAMQACYAHVPQLRWETMDV-RKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVL 149 (215)
T ss_dssp EESCHHHHHHHHHHTTTCTTCEEEECCT-TSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHE
T ss_pred EeCCHHHHHHHHHhcccCCCcEEEEcch-hcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhC
Confidence 599999999999886 3468899997 5689999999999999999887522111 1123567788999998887
Q ss_pred h
Q psy4109 74 W 74 (77)
Q Consensus 74 ~ 74 (77)
+
T Consensus 150 k 150 (215)
T 2pxx_A 150 V 150 (215)
T ss_dssp E
T ss_pred c
Confidence 6
No 45
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.63 E-value=3.2e-08 Score=65.70 Aligned_cols=64 Identities=14% Similarity=0.094 Sum_probs=52.9
Q ss_pred CCCCHHHHHHHHhcCCC-----CcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVE-----GDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~-----~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++... .+++++|+ ..+|+.+++||+|++..+++|+.+ ..+..+++++++.|+
T Consensus 108 vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~---------~~~~~~l~~~~~~Lk 176 (241)
T 2ex4_A 108 VDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QDFTPEPDSYDVIWIQWVIGHLTD---------QHLAEFLRRCKGSLR 176 (241)
T ss_dssp EESCHHHHHHHHHHTGGGGGGEEEEEECCG-GGCCCCSSCEEEEEEESCGGGSCH---------HHHHHHHHHHHHHEE
T ss_pred EeCCHHHHHHHHHHhhhcCCceEEEEEcCh-hhcCCCCCCEEEEEEcchhhhCCH---------HHHHHHHHHHHHhcC
Confidence 59999999999988632 47899997 578888889999999999988754 345778888888875
No 46
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.63 E-value=3.2e-08 Score=67.20 Aligned_cols=67 Identities=12% Similarity=0.076 Sum_probs=49.9
Q ss_pred CCCCHHHHHHHHhcC---C-C------------------------------C-cEEEccCCCCCCCC---CCceeeeeec
Q psy4109 1 MKKNAFYTNVARDRE---V-E------------------------------G-DLVLSDLGQGVPFR---AGAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---~-~------------------------------~-~~~~~D~~~~lPf~---~~sFD~v~s~ 42 (77)
+|+|+.|++.|+++. + . . +++++|+.+..|+. +++||+|+|+
T Consensus 84 ~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~ 163 (263)
T 2a14_A 84 SDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTL 163 (263)
T ss_dssp EESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEE
T ss_pred ccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeeh
Confidence 599999999998642 0 0 1 28899986655654 6799999999
Q ss_pred cchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 43 SALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 43 ~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
.++||+. +. ...+.+.++++++.|+
T Consensus 164 ~~l~~i~------~~-~~~~~~~l~~i~r~LK 188 (263)
T 2a14_A 164 LAMECAC------CS-LDAYRAALCNLASLLK 188 (263)
T ss_dssp SCHHHHC------SS-HHHHHHHHHHHHTTEE
T ss_pred HHHHHhc------CC-HHHHHHHHHHHHHHcC
Confidence 9999972 11 3456778899988875
No 47
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.62 E-value=2.8e-08 Score=68.55 Aligned_cols=64 Identities=13% Similarity=0.046 Sum_probs=52.6
Q ss_pred CCCCHHHHHHHHhcCCC------CcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVE------GDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~------~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++... .+++++|+ ..+|+. ++||+|+++.+++|+.++ +...++++++++.|+
T Consensus 149 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~-~~fD~v~~~~~~~~~~~~--------~~~~~~l~~~~~~Lk 218 (305)
T 3ocj_A 149 IDYDPEALDGATRLAAGHALAGQITLHRQDA-WKLDTR-EGYDLLTSNGLNIYEPDD--------ARVTELYRRFWQALK 218 (305)
T ss_dssp EESCHHHHHHHHHHHTTSTTGGGEEEEECCG-GGCCCC-SCEEEEECCSSGGGCCCH--------HHHHHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHHHhcCCCCceEEEECch-hcCCcc-CCeEEEEECChhhhcCCH--------HHHHHHHHHHHHhcC
Confidence 59999999999987531 57899998 568887 999999999999998654 445568888888876
No 48
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.62 E-value=7.4e-09 Score=68.77 Aligned_cols=62 Identities=16% Similarity=0.170 Sum_probs=51.4
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCC--CCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHhh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGV--PFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLWS 75 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~l--Pf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~~ 75 (77)
+|+|++|++.|+++ .+++++|+. .+ |+.+++||.|+|+.+++|+.++ .+..+|+++++.|+.
T Consensus 69 vD~s~~~~~~a~~~---~~~~~~d~~-~~~~~~~~~~fD~i~~~~~l~~~~~~---------~~~~~l~~~~~~Lkp 132 (240)
T 3dli_A 69 VDINEDMIKFCEGK---FNVVKSDAI-EYLKSLPDKYLDGVMISHFVEHLDPE---------RLFELLSLCYSKMKY 132 (240)
T ss_dssp ECSCHHHHHHHHTT---SEEECSCHH-HHHHTSCTTCBSEEEEESCGGGSCGG---------GHHHHHHHHHHHBCT
T ss_pred EECCHHHHHHHHhh---cceeeccHH-HHhhhcCCCCeeEEEECCchhhCCcH---------HHHHHHHHHHHHcCC
Confidence 59999999999988 678888874 44 8899999999999999988532 456788888888863
No 49
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.61 E-value=4.1e-08 Score=63.79 Aligned_cols=62 Identities=11% Similarity=0.068 Sum_probs=52.3
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. ...++++|+ ..+| .+++||+|+++.+++|+. .+.+..+++++++.|+
T Consensus 71 vD~s~~~~~~a~~~~-~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~---------~~~~~~~l~~~~~~Lk 132 (211)
T 3e23_A 71 TDGSPELAAEASRRL-GRPVRTMLF-HQLD-AIDAYDAVWAHACLLHVP---------RDELADVLKLIWRALK 132 (211)
T ss_dssp EESCHHHHHHHHHHH-TSCCEECCG-GGCC-CCSCEEEEEECSCGGGSC---------HHHHHHHHHHHHHHEE
T ss_pred ECCCHHHHHHHHHhc-CCceEEeee-ccCC-CCCcEEEEEecCchhhcC---------HHHHHHHHHHHHHhcC
Confidence 599999999999885 467889997 5688 899999999999998773 4566788999988876
No 50
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.60 E-value=1.3e-08 Score=67.68 Aligned_cols=61 Identities=11% Similarity=0.097 Sum_probs=48.8
Q ss_pred CCCCHHHHHHHHhcCC------CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREV------EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~------~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++.. ..+++++|+ ..+|+.+++||+|+++.+++|+ ++ ..+++++++.|+
T Consensus 75 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~-~~-----------~~~l~~~~~~L~ 141 (257)
T 3f4k_A 75 IDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEGAIYNI-GF-----------ERGMNEWSKYLK 141 (257)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEESCSCCC-CH-----------HHHHHHHHTTEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecChHhhc-CH-----------HHHHHHHHHHcC
Confidence 5999999999988742 267899998 6799999999999999999887 22 346677766654
No 51
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.60 E-value=2.6e-08 Score=68.79 Aligned_cols=65 Identities=11% Similarity=0.048 Sum_probs=50.4
Q ss_pred CCCCHHHHHHHHhcCC------------CCcEEEccCCCCCC----CC--CCceeeeeeccchhhh-cccCCCCCChHHH
Q psy4109 1 MKKNAFYTNVARDREV------------EGDLVLSDLGQGVP----FR--AGAFDGAISISALQWL-CNADKTSHNPAKR 61 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~------------~~~~~~~D~~~~lP----f~--~~sFD~v~s~~~l~w~-~d~~~~~~~p~~~ 61 (77)
+|+|++|++.|+++.. ..+++++|+ +.+| +. +++||+|+|+.++||+ .+ .+.
T Consensus 63 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~--------~~~ 133 (313)
T 3bgv_A 63 TDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADS-SKELLIDKFRDPQMCFDICSCQFVCHYSFES--------YEQ 133 (313)
T ss_dssp EESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCT-TTSCSTTTCSSTTCCEEEEEEETCGGGGGGS--------HHH
T ss_pred EeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecc-cccchhhhcccCCCCEEEEEEecchhhccCC--------HHH
Confidence 5999999999988742 357899998 4565 64 5699999999999998 33 245
Q ss_pred HHHHHHHHHHHHh
Q psy4109 62 LYKFFSSLFACLW 74 (77)
Q Consensus 62 l~~~~~~l~~~L~ 74 (77)
+..+|++++++|+
T Consensus 134 ~~~~l~~~~~~Lk 146 (313)
T 3bgv_A 134 ADMMLRNACERLS 146 (313)
T ss_dssp HHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHhC
Confidence 5678888887765
No 52
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.60 E-value=2.9e-08 Score=67.39 Aligned_cols=69 Identities=7% Similarity=0.040 Sum_probs=53.9
Q ss_pred CCCCHHHHHHHHhcC---------CCCcEEEccCCCCCC---CCCCceeeeeec-cchhhhcccCCCCCChHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE---------VEGDLVLSDLGQGVP---FRAGAFDGAISI-SALQWLCNADKTSHNPAKRLYKFFS 67 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---------~~~~~~~~D~~~~lP---f~~~sFD~v~s~-~~l~w~~d~~~~~~~p~~~l~~~~~ 67 (77)
+|+|++|++.|+++. ....+..+|+ ..+| +.+++||+|++. .+++|+.+.... .+.+..+++
T Consensus 85 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~----~~~~~~~l~ 159 (293)
T 3thr_A 85 VDASDKMLKYALKERWNRRKEPAFDKWVIEEANW-LTLDKDVPAGDGFDAVICLGNSFAHLPDSKGD----QSEHRLALK 159 (293)
T ss_dssp EESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG-GGHHHHSCCTTCEEEEEECTTCGGGSCCSSSS----SHHHHHHHH
T ss_pred EECCHHHHHHHHHhhhhcccccccceeeEeecCh-hhCccccccCCCeEEEEEcChHHhhcCccccC----HHHHHHHHH
Confidence 599999999998753 2356788897 5688 889999999998 799999763222 256677888
Q ss_pred HHHHHHh
Q psy4109 68 SLFACLW 74 (77)
Q Consensus 68 ~l~~~L~ 74 (77)
++++.|+
T Consensus 160 ~~~~~Lk 166 (293)
T 3thr_A 160 NIASMVR 166 (293)
T ss_dssp HHHHTEE
T ss_pred HHHHHcC
Confidence 8888775
No 53
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.59 E-value=2.9e-08 Score=65.05 Aligned_cols=64 Identities=14% Similarity=0.189 Sum_probs=51.2
Q ss_pred CCCCHHHHHHHHhcCC----CCcEEEccCCCCCCCCCCceeeeeecc-chhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREV----EGDLVLSDLGQGVPFRAGAFDGAISIS-ALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~----~~~~~~~D~~~~lPf~~~sFD~v~s~~-~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++.. ..+++++|+ ..+|+. ++||+|+++. +++|+.++ ..+..+++++++.|+
T Consensus 65 ~D~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~-~~fD~v~~~~~~l~~~~~~--------~~~~~~l~~~~~~L~ 133 (246)
T 1y8c_A 65 VDLSQEMLSEAENKFRSQGLKPRLACQDI-SNLNIN-RKFDLITCCLDSTNYIIDS--------DDLKKYFKAVSNHLK 133 (246)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCCEEECCCG-GGCCCS-CCEEEEEECTTGGGGCCSH--------HHHHHHHHHHHTTEE
T ss_pred EECCHHHHHHHHHHHhhcCCCeEEEeccc-ccCCcc-CCceEEEEcCccccccCCH--------HHHHHHHHHHHHhcC
Confidence 5999999999998742 578899998 568876 8899999998 99998432 356678888887765
No 54
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.58 E-value=1.5e-07 Score=59.37 Aligned_cols=64 Identities=16% Similarity=0.172 Sum_probs=52.5
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeec-cchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISI-SALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~-~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++..+.+++++|+ ..+|+.+++||+|+++ .+++|+. ...+..+++++++.|+
T Consensus 74 ~D~~~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~~D~i~~~~~~~~~~~---------~~~~~~~l~~~~~~l~ 138 (195)
T 3cgg_A 74 TDLDPILIDYAKQDFPEARWVVGDL-SVDQISETDFDLIVSAGNVMGFLA---------EDGREPALANIHRALG 138 (195)
T ss_dssp EESCHHHHHHHHHHCTTSEEEECCT-TTSCCCCCCEEEEEECCCCGGGSC---------HHHHHHHHHHHHHHEE
T ss_pred EcCCHHHHHHHHHhCCCCcEEEccc-ccCCCCCCceeEEEECCcHHhhcC---------hHHHHHHHHHHHHHhC
Confidence 5899999999999987789999998 5688888999999998 5777652 3445778888888775
No 55
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.57 E-value=5.9e-08 Score=67.06 Aligned_cols=61 Identities=16% Similarity=0.211 Sum_probs=50.8
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. .+.+++++|+ ..+|+.+++||+|+++.+++|+ + +..+|+++++.|+
T Consensus 146 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~~~~~l~~~-~-----------~~~~l~~~~~~Lk 212 (312)
T 3vc1_A 146 VTLSAAQADFGNRRARELRIDDHVRSRVCNM-LDTPFDKGAVTASWNNESTMYV-D-----------LHDLFSEHSRFLK 212 (312)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEEESCGGGS-C-----------HHHHHHHHHHHEE
T ss_pred EeCCHHHHHHHHHHHHHcCCCCceEEEECCh-hcCCCCCCCEeEEEECCchhhC-C-----------HHHHHHHHHHHcC
Confidence 599999999998763 1368999998 5799999999999999999988 2 4567888887775
No 56
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.54 E-value=9.6e-08 Score=64.39 Aligned_cols=66 Identities=17% Similarity=0.050 Sum_probs=52.1
Q ss_pred CCCCHHHHHHHHhcCC------CCcEEEccCCCCCCC-CCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV------EGDLVLSDLGQGVPF-RAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~------~~~~~~~D~~~~lPf-~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|++|++.|+++.. ...++++|+ ..+|+ .+++||+|+++.++||+. .....+..+++++++.|
T Consensus 93 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~v~~~~~l~~~~-------~~~~~~~~~l~~~~~~L 164 (298)
T 1ri5_A 93 VDIAEVSINDARVRARNMKRRFKVFFRAQDS-YGRHMDLGKEFDVISSQFSFHYAF-------STSESLDIAQRNIARHL 164 (298)
T ss_dssp EESCHHHHHHHHHHHHTSCCSSEEEEEESCT-TTSCCCCSSCEEEEEEESCGGGGG-------SSHHHHHHHHHHHHHTE
T ss_pred EECCHHHHHHHHHHHHhcCCCccEEEEECCc-cccccCCCCCcCEEEECchhhhhc-------CCHHHHHHHHHHHHHhc
Confidence 5999999999998742 247899997 56888 689999999999998851 22355677888888877
Q ss_pred h
Q psy4109 74 W 74 (77)
Q Consensus 74 ~ 74 (77)
+
T Consensus 165 k 165 (298)
T 1ri5_A 165 R 165 (298)
T ss_dssp E
T ss_pred C
Confidence 5
No 57
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.54 E-value=1.1e-07 Score=65.67 Aligned_cols=53 Identities=13% Similarity=0.219 Sum_probs=39.3
Q ss_pred CCcEEEccCCCCC----CCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 17 EGDLVLSDLGQGV----PFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 17 ~~~~~~~D~~~~l----Pf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+.+++++|+.... ++.+++||+|+|..+++|+.- ....+.++++|+++++.|+
T Consensus 155 ~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl-----~~~~~~~~~~l~~~~~~Lk 211 (292)
T 3g07_A 155 NVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHL-----NWGDEGLKRMFRRIYRHLR 211 (292)
T ss_dssp TEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHH-----HHHHHHHHHHHHHHHHHEE
T ss_pred cceEEecccccCccccccccCCCcCEEEEChHHHHhhh-----cCCHHHHHHHHHHHHHHhC
Confidence 3578889974321 367899999999999999820 0134577889999999886
No 58
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.53 E-value=3.3e-08 Score=68.32 Aligned_cols=64 Identities=8% Similarity=0.063 Sum_probs=48.5
Q ss_pred CCCCHHHHHHHHhcC---CCCcEEEccCCCCCC-----------CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE---VEGDLVLSDLGQGVP-----------FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFF 66 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---~~~~~~~~D~~~~lP-----------f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~ 66 (77)
+|+|++||+.|+++. ...+++++|+.+ .+ +..++||+|+++.++||+.+. ..+.+|
T Consensus 110 vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~---------~~~~~l 179 (274)
T 2qe6_A 110 VDIDPMVLTHGRALLAKDPNTAVFTADVRD-PEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD---------VVDRVV 179 (274)
T ss_dssp EESSHHHHHHHHHHHTTCTTEEEEECCTTC-HHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT---------THHHHH
T ss_pred EECChHHHHHHHHhcCCCCCeEEEEeeCCC-chhhhccchhhccCCCCCCEEEEEechhhhCCcH---------HHHHHH
Confidence 599999999999875 346899999843 21 233589999999999999653 235578
Q ss_pred HHHHHHHh
Q psy4109 67 SSLFACLW 74 (77)
Q Consensus 67 ~~l~~~L~ 74 (77)
++++++|+
T Consensus 180 ~~~~~~L~ 187 (274)
T 2qe6_A 180 GAYRDALA 187 (274)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhCC
Confidence 88888775
No 59
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.52 E-value=1.5e-07 Score=61.13 Aligned_cols=64 Identities=17% Similarity=0.232 Sum_probs=50.2
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. ...+++++|+ ..+|+.+++||+|+++.++++.. .....++++++++.|+
T Consensus 66 vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~v~~~~~~~~~~---------~~~~~~~l~~~~~~L~ 133 (227)
T 1ve3_A 66 VDISEDMIRKAREYAKSRESNVEFIVGDA-RKLSFEDKTFDYVIFIDSIVHFE---------PLELNQVFKEVRRVLK 133 (227)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCEEEECCT-TSCCSCTTCEEEEEEESCGGGCC---------HHHHHHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHHHhcCCCceEEECch-hcCCCCCCcEEEEEEcCchHhCC---------HHHHHHHHHHHHHHcC
Confidence 599999999998774 4578999998 56888899999999999854431 1345678888888775
No 60
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.51 E-value=7.8e-08 Score=63.49 Aligned_cols=63 Identities=11% Similarity=-0.046 Sum_probs=49.8
Q ss_pred CCCCHHHHHHHHhcCCC------CcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVE------GDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~------~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++... .+++++|+. .+| .+++||+|+++.+++|+. ++....+++++++.|+
T Consensus 94 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~---------~~~~~~~l~~~~~~Lk 162 (235)
T 3lcc_A 94 LDISESALAKANETYGSSPKAEYFSFVKEDVF-TWR-PTELFDLIFDYVFFCAIE---------PEMRPAWAKSMYELLK 162 (235)
T ss_dssp ECSCHHHHHHHHHHHTTSGGGGGEEEECCCTT-TCC-CSSCEEEEEEESSTTTSC---------GGGHHHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHhhccCCCcceEEEECchh-cCC-CCCCeeEEEEChhhhcCC---------HHHHHHHHHHHHHHCC
Confidence 59999999999988632 579999984 566 466999999999998874 2345678888888775
No 61
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.51 E-value=6.2e-08 Score=67.91 Aligned_cols=66 Identities=14% Similarity=0.057 Sum_probs=48.0
Q ss_pred CCCCHHHHHHHHhcCCC-----------CcEEEccCCC-----CC--CCCCCceeeeeeccchhhhcccCCCCCChHHHH
Q psy4109 1 MKKNAFYTNVARDREVE-----------GDLVLSDLGQ-----GV--PFRAGAFDGAISISALQWLCNADKTSHNPAKRL 62 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~-----------~~~~~~D~~~-----~l--Pf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l 62 (77)
+|+|++||+.|+++... .++.++|+.. .+ ++.+++||+|+|..++||+.+.. .+
T Consensus 77 iD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~--------~~ 148 (302)
T 2vdw_A 77 TDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPR--------HY 148 (302)
T ss_dssp EESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTT--------TH
T ss_pred EECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHH--------HH
Confidence 69999999999987421 2366777521 12 46688999999999999975431 12
Q ss_pred HHHHHHHHHHHh
Q psy4109 63 YKFFSSLFACLW 74 (77)
Q Consensus 63 ~~~~~~l~~~L~ 74 (77)
..+++++++.|+
T Consensus 149 ~~~l~~~~r~Lk 160 (302)
T 2vdw_A 149 ATVMNNLSELTA 160 (302)
T ss_dssp HHHHHHHHHHEE
T ss_pred HHHHHHHHHHcC
Confidence 578999998886
No 62
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.51 E-value=1e-07 Score=63.28 Aligned_cols=67 Identities=13% Similarity=0.014 Sum_probs=50.5
Q ss_pred CCCCHHHHHHHHhcCCC----------------------------------C-cEEEccCCCCCCCCC---Cceeeeeec
Q psy4109 1 MKKNAFYTNVARDREVE----------------------------------G-DLVLSDLGQGVPFRA---GAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~----------------------------------~-~~~~~D~~~~lPf~~---~sFD~v~s~ 42 (77)
+|+|+.|++.|+++... . .++++|+.+..|+.+ ++||+|+++
T Consensus 85 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~ 164 (265)
T 2i62_A 85 SDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLST 164 (265)
T ss_dssp EESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEE
T ss_pred ecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEh
Confidence 59999999999877422 4 789999865445566 899999999
Q ss_pred cchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 43 SALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 43 ~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
.+++++.. ....+..+++++++.|+
T Consensus 165 ~~l~~~~~-------~~~~~~~~l~~~~~~Lk 189 (265)
T 2i62_A 165 LCLDAACP-------DLPAYRTALRNLGSLLK 189 (265)
T ss_dssp SCHHHHCS-------SHHHHHHHHHHHHTTEE
T ss_pred hhhhhhcC-------ChHHHHHHHHHHHhhCC
Confidence 99997632 13456778888887765
No 63
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.48 E-value=7.4e-08 Score=65.80 Aligned_cols=61 Identities=11% Similarity=0.162 Sum_probs=49.0
Q ss_pred CCCCHHHHHHHHhcCC----CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREV----EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~----~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++.. +.+++++|+ ..+|+ +++||.|++..+++|+.|+ .++++++++.|+
T Consensus 53 vD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~~~~-~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~Lk 117 (284)
T 3gu3_A 53 IDSGETLLAEARELFRLLPYDSEFLEGDA-TEIEL-NDKYDIAICHAFLLHMTTP-----------ETMLQKMIHSVK 117 (284)
T ss_dssp EESCHHHHHHHHHHHHSSSSEEEEEESCT-TTCCC-SSCEEEEEEESCGGGCSSH-----------HHHHHHHHHTEE
T ss_pred EECCHHHHHHHHHHHHhcCCceEEEEcch-hhcCc-CCCeeEEEECChhhcCCCH-----------HHHHHHHHHHcC
Confidence 5999999999998742 468899998 56888 5799999999999998654 357777777664
No 64
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.47 E-value=1.6e-07 Score=65.68 Aligned_cols=64 Identities=11% Similarity=0.088 Sum_probs=49.5
Q ss_pred CCCCHHHHHHHHhcC------------------------------------CCCcEEEccCCCCCCCC-CCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE------------------------------------VEGDLVLSDLGQGVPFR-AGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------------------------------------~~~~~~~~D~~~~lPf~-~~sFD~v~s~~ 43 (77)
+|||++||+.|+++. ..+.+.++|+. ..|+. ++.||+|+|..
T Consensus 143 tDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~-~~~~~~~~~fDlI~crn 221 (274)
T 1af7_A 143 SDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLL-EKQYNVPGPFDAIFCRN 221 (274)
T ss_dssp EESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTT-CSSCCCCCCEEEEEECS
T ss_pred EECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccC-CCCCCcCCCeeEEEECC
Confidence 599999999998752 02467889985 46665 68899999999
Q ss_pred chhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 44 ALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 44 ~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+++|+++ +..++.+++++++|+
T Consensus 222 vliyf~~---------~~~~~vl~~~~~~L~ 243 (274)
T 1af7_A 222 VMIYFDK---------TTQEDILRRFVPLLK 243 (274)
T ss_dssp SGGGSCH---------HHHHHHHHHHGGGEE
T ss_pred chHhCCH---------HHHHHHHHHHHHHhC
Confidence 9999843 345778888888775
No 65
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.46 E-value=3.7e-07 Score=61.37 Aligned_cols=61 Identities=25% Similarity=0.372 Sum_probs=47.5
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhh-cccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWL-CNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~-~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++.. ..++++|+ ..+|+.+++||+|+++.++.++ .+ ...+++++++.|+
T Consensus 82 vD~s~~~l~~a~~~~~-~~~~~~d~-~~~~~~~~~fD~v~~~~~~~~~~~~-----------~~~~l~~~~~~Lk 143 (260)
T 2avn_A 82 VDPSKEMLEVAREKGV-KNVVEAKA-EDLPFPSGAFEAVLALGDVLSYVEN-----------KDKAFSEIRRVLV 143 (260)
T ss_dssp EESCHHHHHHHHHHTC-SCEEECCT-TSCCSCTTCEEEEEECSSHHHHCSC-----------HHHHHHHHHHHEE
T ss_pred EeCCHHHHHHHHhhcC-CCEEECcH-HHCCCCCCCEEEEEEcchhhhcccc-----------HHHHHHHHHHHcC
Confidence 5999999999998875 34899997 5799999999999998755444 32 3556777777765
No 66
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.46 E-value=4e-08 Score=62.65 Aligned_cols=63 Identities=19% Similarity=0.217 Sum_probs=50.0
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++. .+.+++++|+ ..+|+ +++||+|+++.+++|+.. +.+..+++++++.|+
T Consensus 60 vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~-~~~~D~v~~~~~l~~~~~---------~~~~~~l~~~~~~L~ 127 (199)
T 2xvm_A 60 WDKNAMSIANVERIKSIENLDNLHTRVVDL-NNLTF-DRQYDFILSTVVLMFLEA---------KTIPGLIANMQRCTK 127 (199)
T ss_dssp EESCHHHHHHHHHHHHHHTCTTEEEEECCG-GGCCC-CCCEEEEEEESCGGGSCG---------GGHHHHHHHHHHTEE
T ss_pred EECCHHHHHHHHHHHHhCCCCCcEEEEcch-hhCCC-CCCceEEEEcchhhhCCH---------HHHHHHHHHHHHhcC
Confidence 599999999998763 2468899997 56888 899999999999998742 234667888877765
No 67
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.46 E-value=4.4e-08 Score=65.12 Aligned_cols=66 Identities=17% Similarity=0.042 Sum_probs=49.1
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCC--CCCCCceeeeee-ccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGV--PFRAGAFDGAIS-ISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~l--Pf~~~sFD~v~s-~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|++|++.|+++. .+.+++++|+ +.+ |+.+++||+|++ ..++ ...+. .......+++++++.|
T Consensus 89 vD~s~~~l~~a~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~fD~V~~d~~~~-~~~~~------~~~~~~~~l~~~~r~L 160 (236)
T 1zx0_A 89 IECNDGVFQRLRDWAPRQTHKVIPLKGLW-EDVAPTLPDGHFDGILYDTYPL-SEETW------HTHQFNFIKNHAFRLL 160 (236)
T ss_dssp EECCHHHHHHHHHHGGGCSSEEEEEESCH-HHHGGGSCTTCEEEEEECCCCC-BGGGT------TTHHHHHHHHTHHHHE
T ss_pred EcCCHHHHHHHHHHHHhcCCCeEEEecCH-HHhhcccCCCceEEEEECCccc-chhhh------hhhhHHHHHHHHHHhc
Confidence 599999999999875 3457899997 567 899999999999 5554 33222 1344566788888887
Q ss_pred h
Q psy4109 74 W 74 (77)
Q Consensus 74 ~ 74 (77)
+
T Consensus 161 k 161 (236)
T 1zx0_A 161 K 161 (236)
T ss_dssp E
T ss_pred C
Confidence 6
No 68
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.46 E-value=2.7e-07 Score=60.51 Aligned_cols=64 Identities=14% Similarity=0.210 Sum_probs=51.2
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeecc-chhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISIS-ALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~-~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. ...+++++|+ ..+|+. ++||+|+++. +++|+.+ .+.+..+++++++.|+
T Consensus 60 vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~-~~fD~v~~~~~~~~~~~~--------~~~~~~~l~~~~~~L~ 128 (243)
T 3d2l_A 60 VDLSEEMLEIAQEKAMETNRHVDFWVQDM-RELELP-EPVDAITILCDSLNYLQT--------EADVKQTFDSAARLLT 128 (243)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCEEEECCG-GGCCCS-SCEEEEEECTTGGGGCCS--------HHHHHHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHhhhhcCCceEEEEcCh-hhcCCC-CCcCEEEEeCCchhhcCC--------HHHHHHHHHHHHHhcC
Confidence 599999999999874 3568899998 467775 8899999987 8988743 3566778888888775
No 69
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.45 E-value=6.4e-08 Score=66.40 Aligned_cols=69 Identities=9% Similarity=0.120 Sum_probs=54.3
Q ss_pred CCCCHHHHHHHHhcCC------CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREV------EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~------~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++.. ..+++++|+ ..+ +++||+|+|+.+++|+.|+.. ..+.+.+..+|+++++.|+
T Consensus 101 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~---~~~fD~v~~~~~~~~~~d~~~--~~~~~~~~~~l~~~~~~Lk 174 (302)
T 3hem_A 101 LTLSENQYAHDKAMFDEVDSPRRKEVRIQGW-EEF---DEPVDRIVSLGAFEHFADGAG--DAGFERYDTFFKKFYNLTP 174 (302)
T ss_dssp EECCHHHHHHHHHHHHHSCCSSCEEEEECCG-GGC---CCCCSEEEEESCGGGTTCCSS--CCCTTHHHHHHHHHHHSSC
T ss_pred EECCHHHHHHHHHHHHhcCCCCceEEEECCH-HHc---CCCccEEEEcchHHhcCcccc--ccchhHHHHHHHHHHHhcC
Confidence 5999999999998742 357899997 434 899999999999999987641 1244677889999988876
Q ss_pred h
Q psy4109 75 S 75 (77)
Q Consensus 75 ~ 75 (77)
.
T Consensus 175 p 175 (302)
T 3hem_A 175 D 175 (302)
T ss_dssp T
T ss_pred C
Confidence 3
No 70
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.44 E-value=1.4e-07 Score=61.01 Aligned_cols=61 Identities=16% Similarity=0.292 Sum_probs=47.8
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCC-CCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQ-GVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~-~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. .+++++|+.+ .+|+.+++||+|+++.+++|+.++ ..+++++++.|+
T Consensus 60 ~D~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~-----------~~~l~~~~~~L~ 121 (230)
T 3cc8_A 60 IEAFPEAAEQAKEKL--DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDP-----------WAVIEKVKPYIK 121 (230)
T ss_dssp EESSHHHHHHHHTTS--SEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCH-----------HHHHHHTGGGEE
T ss_pred EeCCHHHHHHHHHhC--CcEEEcchhhcCCCCCCCccCEEEECChhhhcCCH-----------HHHHHHHHHHcC
Confidence 599999999999886 4788999743 378889999999999999998543 256666665553
No 71
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.43 E-value=1.7e-07 Score=64.13 Aligned_cols=63 Identities=14% Similarity=0.147 Sum_probs=50.1
Q ss_pred CCCCHHHHHHHHhcCC--------CCcEEEccCCCCCCCCCCceeeeeec-cchhhhcccCCCCCChHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV--------EGDLVLSDLGQGVPFRAGAFDGAISI-SALQWLCNADKTSHNPAKRLYKFFSSLFA 71 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~--------~~~~~~~D~~~~lPf~~~sFD~v~s~-~~l~w~~d~~~~~~~p~~~l~~~~~~l~~ 71 (77)
+|+|++|++.|+++.. +.+++++|+ ..+|+ +++||+|+++ .+++|+ +++.+.++|+++++
T Consensus 110 vD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~-~~~~~-~~~fD~v~~~~~~~~~~---------~~~~~~~~l~~~~~ 178 (299)
T 3g2m_A 110 LELSTSVLAAFRKRLAEAPADVRDRCTLVQGDM-SAFAL-DKRFGTVVISSGSINEL---------DEADRRGLYASVRE 178 (299)
T ss_dssp EESCHHHHHHHHHHHHTSCHHHHTTEEEEECBT-TBCCC-SCCEEEEEECHHHHTTS---------CHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHhhcccccccceEEEeCch-hcCCc-CCCcCEEEECCcccccC---------CHHHHHHHHHHHHH
Confidence 5999999999998742 357999998 56887 8899998854 667665 24567889999998
Q ss_pred HHh
Q psy4109 72 CLW 74 (77)
Q Consensus 72 ~L~ 74 (77)
.|+
T Consensus 179 ~L~ 181 (299)
T 3g2m_A 179 HLE 181 (299)
T ss_dssp HEE
T ss_pred HcC
Confidence 886
No 72
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.42 E-value=5.7e-08 Score=65.95 Aligned_cols=63 Identities=11% Similarity=0.128 Sum_probs=50.7
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++. ...+++++|+ ..+++ +++||+|+++.+++|+.+ ..+..+++++++.|+
T Consensus 148 vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~-~~~fD~i~~~~~~~~~~~---------~~~~~~l~~~~~~Lk 214 (286)
T 3m70_A 148 WDHNENSIAFLNETKEKENLNISTALYDI-NAANI-QENYDFIVSTVVFMFLNR---------ERVPSIIKNMKEHTN 214 (286)
T ss_dssp EESCHHHHHHHHHHHHHTTCCEEEEECCG-GGCCC-CSCEEEEEECSSGGGSCG---------GGHHHHHHHHHHTEE
T ss_pred EECCHHHHHHHHHHHHHcCCceEEEEecc-ccccc-cCCccEEEEccchhhCCH---------HHHHHHHHHHHHhcC
Confidence 599999999998774 2568999998 56776 899999999999998843 345668888887765
No 73
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.42 E-value=2.5e-07 Score=74.13 Aligned_cols=64 Identities=8% Similarity=0.016 Sum_probs=52.7
Q ss_pred CCCCHHHHHHHHhc-----------CCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDR-----------EVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSL 69 (77)
Q Consensus 1 iDiS~~ML~~A~~r-----------~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l 69 (77)
+|+|++|++.|+++ ..+.+++++|+ ..+|+.+++||+|+++.+++|+.+ ..+..+++++
T Consensus 752 VDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa-~dLp~~d~sFDlVV~~eVLeHL~d---------p~l~~~L~eI 821 (950)
T 3htx_A 752 VDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI-LEFDSRLHDVDIGTCLEVIEHMEE---------DQACEFGEKV 821 (950)
T ss_dssp EESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT-TSCCTTSCSCCEEEEESCGGGSCH---------HHHHHHHHHH
T ss_pred EECCHHHHHHHHHHhhhccchhhcCCCceEEEECch-HhCCcccCCeeEEEEeCchhhCCh---------HHHHHHHHHH
Confidence 59999999999883 13468999998 579999999999999999998854 4456788888
Q ss_pred HHHHh
Q psy4109 70 FACLW 74 (77)
Q Consensus 70 ~~~L~ 74 (77)
++.|+
T Consensus 822 ~RvLK 826 (950)
T 3htx_A 822 LSLFH 826 (950)
T ss_dssp HHTTC
T ss_pred HHHcC
Confidence 88775
No 74
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.42 E-value=1.8e-07 Score=61.90 Aligned_cols=42 Identities=14% Similarity=0.067 Sum_probs=38.4
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCC-CCceeeeeec
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFR-AGAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~-~~sFD~v~s~ 42 (77)
+|+|+.|++.|+++.++.+++++|+.+.+|+. +++||+|+|+
T Consensus 76 vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~ 118 (226)
T 3m33_A 76 YDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR 118 (226)
T ss_dssp EESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE
T ss_pred EECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC
Confidence 59999999999999777899999986689998 9999999998
No 75
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.38 E-value=2.1e-08 Score=71.74 Aligned_cols=62 Identities=13% Similarity=0.086 Sum_probs=48.4
Q ss_pred CCCCHHHHHHHHhcCCCC--c-EEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEG--D-LVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~--~-~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|++++... . +...|. +.+|+.+++||+|+++.+++|+.| ...+|+++++.|+
T Consensus 135 vD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~l~~~~~~fD~I~~~~vl~h~~d-----------~~~~l~~~~r~Lk 199 (416)
T 4e2x_A 135 FEPSSGVAAKAREKGIRVRTDFFEKATA-DDVRRTEGPANVIYAANTLCHIPY-----------VQSVLEGVDALLA 199 (416)
T ss_dssp ECCCHHHHHHHHTTTCCEECSCCSHHHH-HHHHHHHCCEEEEEEESCGGGCTT-----------HHHHHHHHHHHEE
T ss_pred ECCCHHHHHHHHHcCCCcceeeechhhH-hhcccCCCCEEEEEECChHHhcCC-----------HHHHHHHHHHHcC
Confidence 599999999999986331 2 333443 568888999999999999999954 3568888888875
No 76
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.35 E-value=3.7e-08 Score=69.63 Aligned_cols=50 Identities=10% Similarity=0.178 Sum_probs=38.6
Q ss_pred CCCCHHHHHHHHhcCC-----CCcEEEccCCCCC------CCCCCcee-----eeeeccchhhhccc
Q psy4109 1 MKKNAFYTNVARDREV-----EGDLVLSDLGQGV------PFRAGAFD-----GAISISALQWLCNA 51 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~-----~~~~~~~D~~~~l------Pf~~~sFD-----~v~s~~~l~w~~d~ 51 (77)
+|.||.||+.||++.. ..+++++|+.+ + |...++|| +++++++|||+.+.
T Consensus 111 VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~-~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~ 176 (277)
T 3giw_A 111 VDNDPIVLTLSQGLLASTPEGRTAYVEADMLD-PASILDAPELRDTLDLTRPVALTVIAIVHFVLDE 176 (277)
T ss_dssp EECCHHHHHTTHHHHCCCSSSEEEEEECCTTC-HHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGG
T ss_pred EeCChHHHHHHHHHhccCCCCcEEEEEecccC-hhhhhcccccccccCcCCcchHHhhhhHhcCCch
Confidence 5999999999998753 25799999853 3 22246676 69999999999774
No 77
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.33 E-value=8.7e-07 Score=61.61 Aligned_cols=62 Identities=11% Similarity=0.104 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCC-----CCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPF-----RAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf-----~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|++|++.|+++.... ++++|+ ..++. .+++||+|+|+.+++|+. .+.++..++++++.|
T Consensus 73 vD~S~~ml~~Ar~~~~~~-~v~~~~-~~~~~~~~~~~~~~fD~Vv~~~~l~~~~---------~~~~~~~l~~l~~lL 139 (261)
T 3iv6_A 73 FDFSQRMCDDLAEALADR-CVTIDL-LDITAEIPKELAGHFDFVLNDRLINRFT---------TEEARRACLGMLSLV 139 (261)
T ss_dssp EESCHHHHHHHHHHTSSS-CCEEEE-CCTTSCCCGGGTTCCSEEEEESCGGGSC---------HHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHhc-cceeee-eecccccccccCCCccEEEEhhhhHhCC---------HHHHHHHHHHHHHhC
Confidence 599999999999986432 455565 23433 267999999999998762 355677888887766
No 78
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.31 E-value=7.3e-07 Score=57.31 Aligned_cols=62 Identities=21% Similarity=0.289 Sum_probs=48.9
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. ...+++++|+ ..+|+.+++||+|+++.. |.+......+++++++.|+
T Consensus 57 vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~-----------~~~~~~~~~~l~~~~~~L~ 122 (202)
T 2kw5_A 57 VDQSSVGLAKAKQLAQEKGVKITTVQSNL-ADFDIVADAWEGIVSIFC-----------HLPSSLRQQLYPKVYQGLK 122 (202)
T ss_dssp ECSSHHHHHHHHHHHHHHTCCEEEECCBT-TTBSCCTTTCSEEEEECC-----------CCCHHHHHHHHHHHHTTCC
T ss_pred EECCHHHHHHHHHHHHhcCCceEEEEcCh-hhcCCCcCCccEEEEEhh-----------cCCHHHHHHHHHHHHHhcC
Confidence 599999999998874 3568899997 578988999999999632 3345667788888887775
No 79
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.30 E-value=7.6e-07 Score=57.13 Aligned_cols=71 Identities=8% Similarity=0.010 Sum_probs=51.4
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCC-CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVP-FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lP-f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|++|++.|+++. .+.+++++|+ ..++ +.+++||.|+++..+ ++..+.......+...++++++++.|
T Consensus 53 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~v~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~L 129 (197)
T 3eey_A 53 FDIQDKAIANTTKKLTDLNLIDRVTLIKDGH-QNMDKYIDCPVKAVMFNLGY--LPSGDHSISTRPETTIQALSKAMELL 129 (197)
T ss_dssp ECSCHHHHHHHHHHHHHTTCGGGEEEECSCG-GGGGGTCCSCEEEEEEEESB--CTTSCTTCBCCHHHHHHHHHHHHHHE
T ss_pred EECCHHHHHHHHHHHHHcCCCCCeEEEECCH-HHHhhhccCCceEEEEcCCc--ccCcccccccCcccHHHHHHHHHHhC
Confidence 599999999999873 2468899997 4565 678999999999755 33333333334455566888888887
Q ss_pred h
Q psy4109 74 W 74 (77)
Q Consensus 74 ~ 74 (77)
+
T Consensus 130 k 130 (197)
T 3eey_A 130 V 130 (197)
T ss_dssp E
T ss_pred c
Confidence 5
No 80
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.28 E-value=3.6e-07 Score=61.89 Aligned_cols=62 Identities=18% Similarity=0.187 Sum_probs=48.4
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. ...+++++|+ ..+| ++||.|+++.+++|+.+ +....+|+++++.|+
T Consensus 93 vd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~---~~fD~v~~~~~l~~~~~---------~~~~~~l~~~~~~Lk 159 (287)
T 1kpg_A 93 LTLSKNQANHVQQLVANSENLRSKRVLLAGW-EQFD---EPVDRIVSIGAFEHFGH---------ERYDAFFSLAHRLLP 159 (287)
T ss_dssp EESCHHHHHHHHHHHHTCCCCSCEEEEESCG-GGCC---CCCSEEEEESCGGGTCT---------TTHHHHHHHHHHHSC
T ss_pred EECCHHHHHHHHHHHHhcCCCCCeEEEECCh-hhCC---CCeeEEEEeCchhhcCh---------HHHHHHHHHHHHhcC
Confidence 599999999999873 2457899997 5565 88999999999998843 234567888888776
Q ss_pred h
Q psy4109 75 S 75 (77)
Q Consensus 75 ~ 75 (77)
.
T Consensus 160 p 160 (287)
T 1kpg_A 160 A 160 (287)
T ss_dssp T
T ss_pred C
Confidence 3
No 81
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.26 E-value=7.4e-07 Score=59.80 Aligned_cols=43 Identities=19% Similarity=0.272 Sum_probs=38.6
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccc
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~ 44 (77)
+|+|++|++.|+++.....++++|+ +.+|+.+++||+|+++.+
T Consensus 115 vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 115 LDVSKVAIKAAAKRYPQVTFCVASS-HRLPFSDTSMDAIIRIYA 157 (269)
T ss_dssp EESCHHHHHHHHHHCTTSEEEECCT-TSCSBCTTCEEEEEEESC
T ss_pred EeCCHHHHHHHHHhCCCcEEEEcch-hhCCCCCCceeEEEEeCC
Confidence 5999999999999987788999997 579999999999999765
No 82
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.22 E-value=5.6e-07 Score=58.02 Aligned_cols=60 Identities=17% Similarity=0.195 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCC---CCCCC-ceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGV---PFRAG-AFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~l---Pf~~~-sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++ ....+.++|+ ..+ |+.++ +||+|+++.+++ ..++ ..+++++++.|+
T Consensus 80 vD~s~~~~~~a~~~-~~~~~~~~~~-~~~~~~~~~~~~~fD~v~~~~~l~-~~~~-----------~~~l~~~~~~L~ 143 (227)
T 3e8s_A 80 VDGDRTLVDAARAA-GAGEVHLASY-AQLAEAKVPVGKDYDLICANFALL-HQDI-----------IELLSAMRTLLV 143 (227)
T ss_dssp EESCHHHHHHHHHT-CSSCEEECCH-HHHHTTCSCCCCCEEEEEEESCCC-SSCC-----------HHHHHHHHHTEE
T ss_pred EcCCHHHHHHHHHh-cccccchhhH-HhhcccccccCCCccEEEECchhh-hhhH-----------HHHHHHHHHHhC
Confidence 59999999999988 4567888886 345 65555 499999999998 4332 357777777664
No 83
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.21 E-value=9e-07 Score=56.27 Aligned_cols=71 Identities=14% Similarity=0.131 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCC-CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVP-FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lP-f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. .+.+++++|. +.++ +.+++||+|+++. .|+...+......++....+++++++.|+
T Consensus 50 vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~-~~l~~~~~~~fD~v~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 126 (185)
T 3mti_A 50 FDVQEQALGKTSQRLSDLGIENTELILDGH-ENLDHYVREPIRAAIFNL--GYLPSADKSVITKPHTTLEAIEKILDRLE 126 (185)
T ss_dssp EESCHHHHHHHHHHHHHHTCCCEEEEESCG-GGGGGTCCSCEEEEEEEE--C-----------CHHHHHHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHHHHcCCCcEEEEeCcH-HHHHhhccCCcCEEEEeC--CCCCCcchhcccChhhHHHHHHHHHHhcC
Confidence 599999999998874 2457888775 4443 5688999999884 45543333333345566677888888775
No 84
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.16 E-value=2.8e-07 Score=61.02 Aligned_cols=65 Identities=11% Similarity=-0.123 Sum_probs=49.9
Q ss_pred CCCCHHHHHHHHhcCC--CCcEEEccCCCCCCCCC-----CceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV--EGDLVLSDLGQGVPFRA-----GAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~--~~~~~~~D~~~~lPf~~-----~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|+.|++.|+++.. +.+++++|+ ..+++.. ..||+|+++.+++|+.+ +.+..+++++++.|
T Consensus 84 vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~d~v~~~~~~~~~~~---------~~~~~~l~~~~~~L 153 (245)
T 3ggd_A 84 LDVSKSALEIAAKENTAANISYRLLDG-LVPEQAAQIHSEIGDANIYMRTGFHHIPV---------EKRELLGQSLRILL 153 (245)
T ss_dssp EESCHHHHHHHHHHSCCTTEEEEECCT-TCHHHHHHHHHHHCSCEEEEESSSTTSCG---------GGHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHhCcccCceEEECcc-cccccccccccccCccEEEEcchhhcCCH---------HHHHHHHHHHHHHc
Confidence 5999999999998864 468899998 4555432 34999999999998843 23467888888888
Q ss_pred hh
Q psy4109 74 WS 75 (77)
Q Consensus 74 ~~ 75 (77)
+.
T Consensus 154 kp 155 (245)
T 3ggd_A 154 GK 155 (245)
T ss_dssp TT
T ss_pred CC
Confidence 63
No 85
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.16 E-value=1.2e-06 Score=56.49 Aligned_cols=46 Identities=11% Similarity=0.154 Sum_probs=35.9
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcc
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCN 50 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d 50 (77)
+|+|++|++.|+++..+.+++++|+ ..+| ++||.|+++..++|+.+
T Consensus 80 vD~~~~~~~~a~~~~~~~~~~~~d~-~~~~---~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 80 FDIDPDAIETAKRNCGGVNFMVADV-SEIS---GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp EESCHHHHHHHHHHCTTSEEEECCG-GGCC---CCEEEEEECCCC-----
T ss_pred EECCHHHHHHHHHhcCCCEEEECcH-HHCC---CCeeEEEECCCchhccC
Confidence 5999999999999876678999997 4565 78999999999999854
No 86
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.16 E-value=2.7e-06 Score=61.61 Aligned_cols=67 Identities=10% Similarity=0.007 Sum_probs=53.2
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++. ...+++++|+ ...+..+++||.|+++..+||- .......+..+++.+++.|+
T Consensus 261 vDis~~al~~A~~n~~~~~~~v~~~~~D~-~~~~~~~~~fD~Ii~npp~~~~------~~~~~~~~~~~l~~~~~~Lk 331 (381)
T 3dmg_A 261 VEDDLASVLSLQKGLEANALKAQALHSDV-DEALTEEARFDIIVTNPPFHVG------GAVILDVAQAFVNVAAARLR 331 (381)
T ss_dssp EESBHHHHHHHHHHHHHTTCCCEEEECST-TTTSCTTCCEEEEEECCCCCTT------CSSCCHHHHHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHHHHcCCCeEEEEcch-hhccccCCCeEEEEECCchhhc------ccccHHHHHHHHHHHHHhcC
Confidence 599999999999874 2468999997 5576677999999999999874 23334677788888888875
No 87
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.15 E-value=7.2e-07 Score=61.38 Aligned_cols=61 Identities=13% Similarity=0.176 Sum_probs=47.8
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. ...+++++|+ ..+| ++||+|+++.+++|+.+ +.+.++++++++.|+
T Consensus 119 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~---~~fD~v~~~~~l~~~~~---------~~~~~~l~~~~~~Lk 185 (318)
T 2fk8_A 119 LTLSKNQHARCEQVLASIDTNRSRQVLLQGW-EDFA---EPVDRIVSIEAFEHFGH---------ENYDDFFKRCFNIMP 185 (318)
T ss_dssp EESCHHHHHHHHHHHHTSCCSSCEEEEESCG-GGCC---CCCSEEEEESCGGGTCG---------GGHHHHHHHHHHHSC
T ss_pred EECCHHHHHHHHHHHHhcCCCCceEEEECCh-HHCC---CCcCEEEEeChHHhcCH---------HHHHHHHHHHHHhcC
Confidence 599999999999873 1357889997 4565 88999999999998842 235668888888775
No 88
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.08 E-value=5.8e-06 Score=54.68 Aligned_cols=63 Identities=19% Similarity=0.351 Sum_probs=48.2
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeecc-chhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISIS-ALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~-~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. ...+++++|+ ..+|+. ++||+|++.. +++++ +.+.+.++++++++.|+
T Consensus 69 vD~s~~~l~~a~~~~~~~~~~v~~~~~d~-~~~~~~-~~fD~v~~~~~~~~~~---------~~~~~~~~l~~~~~~L~ 136 (252)
T 1wzn_A 69 LDLHEEMLRVARRKAKERNLKIEFLQGDV-LEIAFK-NEFDAVTMFFSTIMYF---------DEEDLRKLFSKVAEALK 136 (252)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCEEEESCG-GGCCCC-SCEEEEEECSSGGGGS---------CHHHHHHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHHHhcCCceEEEECCh-hhcccC-CCccEEEEcCCchhcC---------CHHHHHHHHHHHHHHcC
Confidence 599999999998764 3468999998 457764 6899999874 44443 24567888999988875
No 89
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.08 E-value=2.9e-06 Score=54.16 Aligned_cols=45 Identities=16% Similarity=0.011 Sum_probs=37.5
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhccc
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNA 51 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~ 51 (77)
+|+|++|++. ..+.+++++|+.+ |+.+++||+|+++..++|..+.
T Consensus 50 vD~s~~~~~~----~~~~~~~~~d~~~--~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 50 TDLNIRALES----HRGGNLVRADLLC--SINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp EESCHHHHHT----CSSSCEEECSTTT--TBCGGGCSEEEECCCCBTTCCC
T ss_pred EECCHHHHhc----ccCCeEEECChhh--hcccCCCCEEEECCCCccCCcc
Confidence 5999999988 3357899999854 6777999999999999987665
No 90
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.06 E-value=8.2e-06 Score=51.17 Aligned_cols=62 Identities=15% Similarity=0.073 Sum_probs=47.6
Q ss_pred CCCCHHHHHHHHhcC-----CC--CcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE-----VE--GDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~--~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|++|++.|+++. .+ .+++++|+.+ ++.+++||+|+++..++| ....+..+++++++.|
T Consensus 80 ~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~D~v~~~~~~~~----------~~~~~~~~l~~~~~~L 147 (194)
T 1dus_A 80 ADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE--NVKDRKYNKIITNPPIRA----------GKEVLHRIIEEGKELL 147 (194)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT--TCTTSCEEEEEECCCSTT----------CHHHHHHHHHHHHHHE
T ss_pred EECCHHHHHHHHHHHHHcCCCccceEEEECchhc--ccccCCceEEEECCCccc----------chhHHHHHHHHHHHHc
Confidence 589999999999874 22 6789999854 445889999999988765 2345667888888777
Q ss_pred h
Q psy4109 74 W 74 (77)
Q Consensus 74 ~ 74 (77)
+
T Consensus 148 ~ 148 (194)
T 1dus_A 148 K 148 (194)
T ss_dssp E
T ss_pred C
Confidence 5
No 91
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.05 E-value=5.3e-06 Score=54.29 Aligned_cols=74 Identities=18% Similarity=0.029 Sum_probs=47.1
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCC--------CCChHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKT--------SHNPAKRLYKFFSS 68 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~--------~~~p~~~l~~~~~~ 68 (77)
+|+|++|++.|+++. .+.+++++|+....++.+++||.|+++..+++..+.... +....+.+.++++.
T Consensus 85 vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 164 (230)
T 3evz_A 85 TEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEE 164 (230)
T ss_dssp EECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHH
Confidence 599999999998774 356899999633345668999999999887766542210 01112334677777
Q ss_pred HHHHHh
Q psy4109 69 LFACLW 74 (77)
Q Consensus 69 l~~~L~ 74 (77)
+++.|+
T Consensus 165 ~~~~Lk 170 (230)
T 3evz_A 165 AFDHLN 170 (230)
T ss_dssp HGGGEE
T ss_pred HHHHhC
Confidence 766654
No 92
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.04 E-value=3.1e-06 Score=55.29 Aligned_cols=69 Identities=16% Similarity=0.156 Sum_probs=49.2
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCC--CCCCceeeeeeccchhhhcccCCCCCChHH-HHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVP--FRAGAFDGAISISALQWLCNADKTSHNPAK-RLYKFFSSLFAC 72 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lP--f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~-~l~~~~~~l~~~ 72 (77)
+|+|++|++.|+++. .+..++++|+ ..+| +.+++||.|+++....|... .|.+.+ ....++..+++.
T Consensus 71 vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~D~i~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~ 145 (214)
T 1yzh_A 71 IDIQKSVLSYALDKVLEVGVPNIKLLWVDG-SDLTDYFEDGEIDRLYLNFSDPWPKK----RHEKRRLTYKTFLDTFKRI 145 (214)
T ss_dssp EESCHHHHHHHHHHHHHHCCSSEEEEECCS-SCGGGTSCTTCCSEEEEESCCCCCSG----GGGGGSTTSHHHHHHHHHH
T ss_pred EEcCHHHHHHHHHHHHHcCCCCEEEEeCCH-HHHHhhcCCCCCCEEEEECCCCcccc----chhhhccCCHHHHHHHHHH
Confidence 599999999998764 3568999998 4587 88899999999976555432 121110 235677777777
Q ss_pred Hh
Q psy4109 73 LW 74 (77)
Q Consensus 73 L~ 74 (77)
|+
T Consensus 146 Lk 147 (214)
T 1yzh_A 146 LP 147 (214)
T ss_dssp SC
T ss_pred cC
Confidence 75
No 93
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.02 E-value=9.2e-07 Score=66.49 Aligned_cols=68 Identities=18% Similarity=0.273 Sum_probs=51.2
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCC--CCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGV--PFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~l--Pf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|+.|++.|+.+. ..+++.++|+ +.+ ++.++.||+|+|+.+++|+.|+.. ...++++|+.|-+..
T Consensus 94 iD~~~~~i~~a~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~fD~v~~~e~~ehv~~~~~-----~~~~~~~~~tl~~~~ 167 (569)
T 4azs_A 94 IDFQQENINVCRALAEENPDFAAEFRVGRI-EEVIAALEEGEFDLAIGLSVFHHIVHLHG-----IDEVKRLLSRLADVT 167 (569)
T ss_dssp EESCHHHHHHHHHHHHTSTTSEEEEEECCH-HHHHHHCCTTSCSEEEEESCHHHHHHHHC-----HHHHHHHHHHHHHHS
T ss_pred ECCCHHHHHHHHHHHHhcCCCceEEEECCH-HHHhhhccCCCccEEEECcchhcCCCHHH-----HHHHHHHHHHhcccc
Confidence 699999999998653 2458899997 566 577899999999999999987632 344566776665544
Q ss_pred h
Q psy4109 74 W 74 (77)
Q Consensus 74 ~ 74 (77)
+
T Consensus 168 ~ 168 (569)
T 4azs_A 168 Q 168 (569)
T ss_dssp S
T ss_pred c
Confidence 3
No 94
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.02 E-value=2.7e-06 Score=56.97 Aligned_cols=51 Identities=14% Similarity=0.110 Sum_probs=40.4
Q ss_pred CCCCHH------HHHHHHhcC------CCCcEEEcc-C-CCCCCCCCCceeeeeeccchhhhccc
Q psy4109 1 MKKNAF------YTNVARDRE------VEGDLVLSD-L-GQGVPFRAGAFDGAISISALQWLCNA 51 (77)
Q Consensus 1 iDiS~~------ML~~A~~r~------~~~~~~~~D-~-~~~lPf~~~sFD~v~s~~~l~w~~d~ 51 (77)
+|+|++ |++.|+++. .+.+++++| . ...+|+.+++||+|+++.+++|+.++
T Consensus 74 vD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~ 138 (275)
T 3bkx_A 74 IDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASA 138 (275)
T ss_dssp ECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCH
T ss_pred EECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCH
Confidence 478886 999998774 235788888 2 14688899999999999999998653
No 95
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.96 E-value=6.5e-06 Score=58.75 Aligned_cols=62 Identities=16% Similarity=0.117 Sum_probs=46.6
Q ss_pred CCCCHHHHHHHHhcC----C-CCcEEEccCCCCCCC-CCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----V-EGDLVLSDLGQGVPF-RAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~-~~~~~~~D~~~~lPf-~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. . +.+++++|+.+.+|. .+++||.|+++..+++. .++.+++++++.|+
T Consensus 201 vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~------------~~~~~l~~~~~~Lk 268 (373)
T 2qm3_A 201 LDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPETLE------------AIRAFVGRGIATLK 268 (373)
T ss_dssp ECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHH------------HHHHHHHHHHHTBC
T ss_pred EECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCCchH------------HHHHHHHHHHHHcc
Confidence 599999999999873 2 468999998544775 46799999999765432 24677777777664
No 96
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.96 E-value=4.5e-06 Score=52.24 Aligned_cols=46 Identities=9% Similarity=-0.159 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeeccchhh
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISISALQW 47 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w 47 (77)
+|+|++|++.|+++. . .. ++++|+.+.+|..+++||+|+++.+++|
T Consensus 55 vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~~~ 106 (178)
T 3hm2_A 55 FEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGGLTA 106 (178)
T ss_dssp ECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC-TTC
T ss_pred EeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECCcccH
Confidence 599999999999773 1 24 7888875556555589999999998876
No 97
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.93 E-value=1.3e-05 Score=53.58 Aligned_cols=54 Identities=13% Similarity=0.048 Sum_probs=37.3
Q ss_pred EEEccCCCCCCC----CCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHhh
Q psy4109 20 LVLSDLGQGVPF----RAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLWS 75 (77)
Q Consensus 20 ~~~~D~~~~lPf----~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~~ 75 (77)
++++|+.+.++. .+++||+|+|+..+....+... ....+.+..+++++++.|+.
T Consensus 149 ~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~--~~~~~~~~~~l~~~~~~Lkp 206 (250)
T 1o9g_A 149 IRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEG--QVPGQPVAGLLRSLASALPA 206 (250)
T ss_dssp EEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSS--CCCHHHHHHHHHHHHHHSCT
T ss_pred eeecccccccccccccCCCCceEEEeCCCeeccccccc--cccccHHHHHHHHHHHhcCC
Confidence 899998542221 4458999999987765544321 24467788899999988863
No 98
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.92 E-value=8.2e-06 Score=57.16 Aligned_cols=65 Identities=23% Similarity=0.177 Sum_probs=43.2
Q ss_pred CCCCHHHHHHHHhcC----------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHH--HHHHHH
Q psy4109 1 MKKNAFYTNVARDRE----------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRL--YKFFSS 68 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l--~~~~~~ 68 (77)
+|||++|++.|+++. +..+++.+|+.+-++..+++||+|++...-.+ .|...| +++|+.
T Consensus 113 VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~---------~~~~~l~~~~f~~~ 183 (294)
T 3adn_A 113 VEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI---------GPGESLFTSAFYEG 183 (294)
T ss_dssp ECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC-------------------CCHHHHHH
T ss_pred EECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCCCcc---------CcchhccHHHHHHH
Confidence 599999999999863 24689999976556666889999999765332 233445 788888
Q ss_pred HHHHHh
Q psy4109 69 LFACLW 74 (77)
Q Consensus 69 l~~~L~ 74 (77)
++++|+
T Consensus 184 ~~~~Lk 189 (294)
T 3adn_A 184 CKRCLN 189 (294)
T ss_dssp HHHTEE
T ss_pred HHHhcC
Confidence 888775
No 99
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=97.89 E-value=1.3e-05 Score=55.23 Aligned_cols=62 Identities=10% Similarity=0.054 Sum_probs=48.0
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+| +|++.|+++. ...+++++|+ ...|+.++ ||+|++..++|++.+ +...++++++++.|+
T Consensus 195 ~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~-~D~v~~~~~l~~~~~---------~~~~~~l~~~~~~L~ 262 (335)
T 2r3s_A 195 VDWA-SVLEVAKENARIQGVASRYHTIAGSA-FEVDYGND-YDLVLLPNFLHHFDV---------ATCEQLLRKIKTALA 262 (335)
T ss_dssp EECH-HHHHHHHHHHHHHTCGGGEEEEESCT-TTSCCCSC-EEEEEEESCGGGSCH---------HHHHHHHHHHHHHEE
T ss_pred EecH-HHHHHHHHHHHhcCCCcceEEEeccc-ccCCCCCC-CcEEEEcchhccCCH---------HHHHHHHHHHHHhCC
Confidence 5899 9999998873 1368899998 45676655 999999999988733 345678888888775
No 100
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.87 E-value=2.5e-06 Score=57.01 Aligned_cols=71 Identities=6% Similarity=-0.071 Sum_probs=48.5
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCC--CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVP--FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lP--f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|++|++.|+++. .+.+++++|+.+.+| +.+++||.|++++...|........... ...+++.+++.|
T Consensus 64 iD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~---~~~~l~~~~r~L 140 (218)
T 3dxy_A 64 IEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIV---QVPFAELVKSKL 140 (218)
T ss_dssp ECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSC---SHHHHHHHHHHE
T ss_pred EEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhhhhhhh---hHHHHHHHHHHc
Confidence 599999999998762 346899999743244 7899999999997766654322111000 124788888777
Q ss_pred h
Q psy4109 74 W 74 (77)
Q Consensus 74 ~ 74 (77)
+
T Consensus 141 k 141 (218)
T 3dxy_A 141 Q 141 (218)
T ss_dssp E
T ss_pred C
Confidence 5
No 101
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.87 E-value=6.6e-06 Score=55.53 Aligned_cols=69 Identities=12% Similarity=0.091 Sum_probs=45.0
Q ss_pred CCCCHHHHHHHHhc----------C-CCCcEEEccCCCCCC--CCCCceeeeeeccchhhhcccCCCCCChHHH--HHHH
Q psy4109 1 MKKNAFYTNVARDR----------E-VEGDLVLSDLGQGVP--FRAGAFDGAISISALQWLCNADKTSHNPAKR--LYKF 65 (77)
Q Consensus 1 iDiS~~ML~~A~~r----------~-~~~~~~~~D~~~~lP--f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~--l~~~ 65 (77)
+|+|+.|++.|+++ + .+.+++++|+.+.+| |.+++||.|+.++.-.|.... |. .++ ...+
T Consensus 76 iDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~----h~-krr~~~~~~ 150 (235)
T 3ckk_A 76 LEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRT----KH-KWRIISPTL 150 (235)
T ss_dssp EESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEEEESCC----------------CCCHHH
T ss_pred EECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhh----hh-hhhhhhHHH
Confidence 69999999998754 1 346899999854477 889999999987655554321 11 111 1468
Q ss_pred HHHHHHHHh
Q psy4109 66 FSSLFACLW 74 (77)
Q Consensus 66 ~~~l~~~L~ 74 (77)
++.+++.|+
T Consensus 151 l~~~~~~Lk 159 (235)
T 3ckk_A 151 LAEYAYVLR 159 (235)
T ss_dssp HHHHHHHEE
T ss_pred HHHHHHHCC
Confidence 888888875
No 102
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=97.86 E-value=2.9e-05 Score=53.86 Aligned_cols=62 Identities=13% Similarity=0.033 Sum_probs=48.1
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+ ++|++.|+++. ...+++.+|+.+ |++. +||+|++..++|++.+ +...+++++++++|+
T Consensus 199 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~p~-~~D~v~~~~vlh~~~~---------~~~~~~l~~~~~~L~ 265 (332)
T 3i53_A 199 LDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD--PLPA-GAGGYVLSAVLHDWDD---------LSAVAILRRCAEAAG 265 (332)
T ss_dssp EEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS--CCCC-SCSEEEEESCGGGSCH---------HHHHHHHHHHHHHHT
T ss_pred ecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC--CCCC-CCcEEEEehhhccCCH---------HHHHHHHHHHHHhcC
Confidence 488 99999998762 236889999854 4434 7999999999998854 346678899998886
Q ss_pred h
Q psy4109 75 S 75 (77)
Q Consensus 75 ~ 75 (77)
.
T Consensus 266 p 266 (332)
T 3i53_A 266 S 266 (332)
T ss_dssp T
T ss_pred C
Confidence 3
No 103
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.85 E-value=8.5e-06 Score=53.75 Aligned_cols=70 Identities=11% Similarity=0.084 Sum_probs=49.4
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCC--CCCCceeeeeeccchhhhcccCCCCCChHHH-HHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVP--FRAGAFDGAISISALQWLCNADKTSHNPAKR-LYKFFSSLFAC 72 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lP--f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~-l~~~~~~l~~~ 72 (77)
+|+|++|++.|+++. .+.+++++|+ ..+| +.+++||.|+++..-.|.... |...+. ...+++.+++.
T Consensus 68 iD~s~~~l~~a~~~~~~~~~~nv~~~~~d~-~~l~~~~~~~~~d~v~~~~~~p~~~~~----~~~~rl~~~~~l~~~~~~ 142 (213)
T 2fca_A 68 IELFKSVIVTAVQKVKDSEAQNVKLLNIDA-DTLTDVFEPGEVKRVYLNFSDPWPKKR----HEKRRLTYSHFLKKYEEV 142 (213)
T ss_dssp ECSCHHHHHHHHHHHHHSCCSSEEEECCCG-GGHHHHCCTTSCCEEEEESCCCCCSGG----GGGGSTTSHHHHHHHHHH
T ss_pred EEechHHHHHHHHHHHHcCCCCEEEEeCCH-HHHHhhcCcCCcCEEEEECCCCCcCcc----ccccccCcHHHHHHHHHH
Confidence 699999999998762 3468999997 4576 788999999987655554321 222111 35788888888
Q ss_pred Hhh
Q psy4109 73 LWS 75 (77)
Q Consensus 73 L~~ 75 (77)
|+.
T Consensus 143 Lkp 145 (213)
T 2fca_A 143 MGK 145 (213)
T ss_dssp HTT
T ss_pred cCC
Confidence 863
No 104
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.81 E-value=1.2e-06 Score=57.95 Aligned_cols=50 Identities=10% Similarity=-0.033 Sum_probs=41.2
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccC
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNAD 52 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~ 52 (77)
+|+|+.|++.|+++. .+.+++++|+ ..++ .+++||+|+++..++|..+..
T Consensus 106 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~-~~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 106 IDIDPVKIALARNNAEVYGIADKIEFICGDF-LLLA-SFLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp EESCHHHHHHHHHHHHHTTCGGGEEEEESCH-HHHG-GGCCCSEEEECCCCSSGGGGG
T ss_pred EECCHHHHHHHHHHHHHcCCCcCeEEEECCh-HHhc-ccCCCCEEEECCCcCCcchhh
Confidence 599999999998774 2468999997 4565 678999999999999987654
No 105
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.79 E-value=1.5e-05 Score=56.08 Aligned_cols=65 Identities=18% Similarity=0.103 Sum_probs=48.1
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++. ...+++.+|+. . +.+++||.|+++..+||-. ........++++++++.|+
T Consensus 226 vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~-~--~~~~~fD~Iv~~~~~~~g~------~~~~~~~~~~l~~~~~~Lk 294 (343)
T 2pjd_A 226 CDVSAPAVEASRATLAANGVEGEVFASNVF-S--EVKGRFDMIISNPPFHDGM------QTSLDAAQTLIRGAVRHLN 294 (343)
T ss_dssp EESBHHHHHHHHHHHHHTTCCCEEEECSTT-T--TCCSCEEEEEECCCCCSSS------HHHHHHHHHHHHHHGGGEE
T ss_pred EECCHHHHHHHHHHHHHhCCCCEEEEcccc-c--cccCCeeEEEECCCcccCc------cCCHHHHHHHHHHHHHhCC
Confidence 599999999999874 33577888863 3 3488999999999987631 1234566788888887765
No 106
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.79 E-value=1.6e-05 Score=53.54 Aligned_cols=73 Identities=11% Similarity=0.006 Sum_probs=46.7
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCC--CCCCceeeeeeccchhhhc-----cc----CCCCCChHHHHH
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVP--FRAGAFDGAISISALQWLC-----NA----DKTSHNPAKRLY 63 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lP--f~~~sFD~v~s~~~l~w~~-----d~----~~~~~~p~~~l~ 63 (77)
+|+|++|++.|+++. . ..+++++|+. .++ +.+++||+|+++..+.... ++ ....|.+...+.
T Consensus 78 vDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~-~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~ 156 (259)
T 3lpm_A 78 VEIQERLADMAKRSVAYNQLEDQIEIIEYDLK-KITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLE 156 (259)
T ss_dssp ECCSHHHHHHHHHHHHHTTCTTTEEEECSCGG-GGGGTSCTTCEEEEEECCCC-----------------------HHHH
T ss_pred EECCHHHHHHHHHHHHHCCCcccEEEEECcHH-HhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHH
Confidence 599999999998873 1 3588999984 444 5689999999986654331 11 112244456677
Q ss_pred HHHHHHHHHHh
Q psy4109 64 KFFSSLFACLW 74 (77)
Q Consensus 64 ~~~~~l~~~L~ 74 (77)
.+++.+++.|+
T Consensus 157 ~~l~~~~~~Lk 167 (259)
T 3lpm_A 157 DTIRVAASLLK 167 (259)
T ss_dssp HHHHHHHHHEE
T ss_pred HHHHHHHHHcc
Confidence 88888888775
No 107
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.76 E-value=7.6e-06 Score=54.82 Aligned_cols=63 Identities=14% Similarity=0.017 Sum_probs=43.8
Q ss_pred CCCCHHHHHHHHhcCC----CCcEEEccCCC-CCCCCCCceeeeeec-----cchhhhcccCCCCCChHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV----EGDLVLSDLGQ-GVPFRAGAFDGAISI-----SALQWLCNADKTSHNPAKRLYKFFSSLF 70 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~----~~~~~~~D~~~-~lPf~~~sFD~v~s~-----~~l~w~~d~~~~~~~p~~~l~~~~~~l~ 70 (77)
||+|++|++.|+++.. ..+++.+|+.. ..++.+++||.|+.- .+++++ .....++++++
T Consensus 89 id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~-----------~~~~~~~~e~~ 157 (236)
T 3orh_A 89 IECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHT-----------HQFNFIKNHAF 157 (236)
T ss_dssp EECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTT-----------HHHHHHHHTHH
T ss_pred EeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeecccchhhh-----------cchhhhhhhhh
Confidence 6999999999998752 34678888532 235789999999753 333332 34567888888
Q ss_pred HHHh
Q psy4109 71 ACLW 74 (77)
Q Consensus 71 ~~L~ 74 (77)
+.|+
T Consensus 158 rvLk 161 (236)
T 3orh_A 158 RLLK 161 (236)
T ss_dssp HHEE
T ss_pred heeC
Confidence 8875
No 108
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.75 E-value=1.4e-05 Score=57.61 Aligned_cols=66 Identities=8% Similarity=0.124 Sum_probs=45.4
Q ss_pred CCCCHHHHHHHHhcCC--------CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV--------EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFAC 72 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~--------~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~ 72 (77)
+|+|+.|++.|+++.. ..+++++|+.+ ++.+++||.|+++..+|+.... ......++|+.+++.
T Consensus 252 vD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~--~~~~~~fD~Ii~nppfh~~~~~------~~~~~~~~l~~~~~~ 323 (375)
T 4dcm_A 252 VDESPMAVASSRLNVETNMPEALDRCEFMINNALS--GVEPFRFNAVLCNPPFHQQHAL------TDNVAWEMFHHARRC 323 (375)
T ss_dssp EESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT--TCCTTCEEEEEECCCC-------------CCHHHHHHHHHHHH
T ss_pred EECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc--cCCCCCeeEEEECCCcccCccc------CHHHHHHHHHHHHHh
Confidence 5999999999997641 24669999854 6678899999999998864221 122334678888887
Q ss_pred Hh
Q psy4109 73 LW 74 (77)
Q Consensus 73 L~ 74 (77)
|+
T Consensus 324 Lk 325 (375)
T 4dcm_A 324 LK 325 (375)
T ss_dssp EE
T ss_pred CC
Confidence 75
No 109
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.74 E-value=3.3e-05 Score=54.66 Aligned_cols=64 Identities=13% Similarity=0.135 Sum_probs=48.5
Q ss_pred CCCCHHHHHHHHhcCC------CCcEEEccCCCC-CCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV------EGDLVLSDLGQG-VPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~------~~~~~~~D~~~~-lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+ ++|++.|+++.. ..+++.+|+.+. +|++ ++||+|++..++|++.+ +...+++++++++|
T Consensus 209 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~---------~~~~~~l~~~~~~L 277 (363)
T 3dp7_A 209 VDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSE---------EEVISILTRVAQSI 277 (363)
T ss_dssp EEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESCSTTSCH---------HHHHHHHHHHHHHC
T ss_pred EeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEechhhhCCH---------HHHHHHHHHHHHhc
Confidence 488 999999998732 358899998542 1554 78999999999987743 45567888888888
Q ss_pred hh
Q psy4109 74 WS 75 (77)
Q Consensus 74 ~~ 75 (77)
+.
T Consensus 278 ~p 279 (363)
T 3dp7_A 278 GK 279 (363)
T ss_dssp CT
T ss_pred CC
Confidence 63
No 110
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.74 E-value=6e-06 Score=52.88 Aligned_cols=60 Identities=8% Similarity=-0.012 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCC--CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVP--FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFA 71 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lP--f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~ 71 (77)
+|+|++|++.|+++. .+.+++++|+. .++ +.+++||.|+++..++|. .+.+.+.++.+++
T Consensus 73 vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~fD~i~~~~p~~~~----------~~~~~~~l~~~~~ 139 (189)
T 3p9n_A 73 VESDQRSAAVIARNIEALGLSGATLRRGAVA-AVVAAGTTSPVDLVLADPPYNVD----------SADVDAILAALGT 139 (189)
T ss_dssp EECCHHHHHHHHHHHHHHTCSCEEEEESCHH-HHHHHCCSSCCSEEEECCCTTSC----------HHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEEccHH-HHHhhccCCCccEEEECCCCCcc----------hhhHHHHHHHHHh
Confidence 599999999999874 24689999974 343 457899999999887653 2455667777766
No 111
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.74 E-value=2.9e-05 Score=55.55 Aligned_cols=69 Identities=19% Similarity=0.072 Sum_probs=46.9
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|+.|++.|+++. . ..+++++|+ ..+|+.+++||.|+++..+..-.. ..+....-.+++++.+.+.|
T Consensus 247 ~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~-~~~~~~~~~fD~Ii~npPyg~r~~---~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 247 IEKYRKHLIGAEMNALAAGVLDKIKFIQGDA-TQLSQYVDSVDFAISNLPYGLKIG---KKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp EESCHHHHHHHHHHHHHTTCGGGCEEEECCG-GGGGGTCSCEEEEEEECCCC---------CCHHHHHHHHHHHHHHHE
T ss_pred EeCCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCcccCCcCEEEECCCCCcccC---cchhHHHHHHHHHHHHHHHc
Confidence 599999999999874 2 468999998 578988899999999976543211 11223333356666666554
No 112
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.73 E-value=2.6e-05 Score=55.17 Aligned_cols=64 Identities=16% Similarity=-0.015 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+ |++.|+++. ...+++++|+ ..+|+++++||+|+|..+...+.. ...+..++..+++.|+
T Consensus 93 vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D~Ivs~~~~~~l~~--------~~~~~~~l~~~~~~Lk 162 (340)
T 2fyt_A 93 VDQSE-ILYQAMDIIRLNKLEDTITLIKGKI-EEVHLPVEKVDVIISEWMGYFLLF--------ESMLDSVLYAKNKYLA 162 (340)
T ss_dssp EESST-HHHHHHHHHHHTTCTTTEEEEESCT-TTSCCSCSCEEEEEECCCBTTBTT--------TCHHHHHHHHHHHHEE
T ss_pred EChHH-HHHHHHHHHHHcCCCCcEEEEEeeH-HHhcCCCCcEEEEEEcCchhhccC--------HHHHHHHHHHHHhhcC
Confidence 58996 999998763 2468899998 568888899999999864222211 1345567777777765
No 113
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.73 E-value=5.1e-05 Score=51.50 Aligned_cols=74 Identities=9% Similarity=0.027 Sum_probs=45.1
Q ss_pred CCCCHHHHHHHHhcCCC---------CcEEEccCCCCC------CCCCCceeeeeeccchhhhccc---C----CCCCCh
Q psy4109 1 MKKNAFYTNVARDREVE---------GDLVLSDLGQGV------PFRAGAFDGAISISALQWLCNA---D----KTSHNP 58 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~---------~~~~~~D~~~~l------Pf~~~sFD~v~s~~~l~w~~d~---~----~~~~~p 58 (77)
+|+|++|++.|+++... .+++++|+.+.+ ++.+++||.|+++.-+.+..+. + ..-|..
T Consensus 66 vDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~ 145 (260)
T 2ozv_A 66 YERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMT 145 (260)
T ss_dssp EESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC--------------------
T ss_pred EECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcC
Confidence 59999999999987532 578999985421 3678999999999765543210 0 000111
Q ss_pred HHHHHHHHHHHHHHHh
Q psy4109 59 AKRLYKFFSSLFACLW 74 (77)
Q Consensus 59 ~~~l~~~~~~l~~~L~ 74 (77)
...+..+++.+++.|+
T Consensus 146 ~~~~~~~l~~~~~~Lk 161 (260)
T 2ozv_A 146 EGLFEDWIRTASAIMV 161 (260)
T ss_dssp -CCHHHHHHHHHHHEE
T ss_pred cCCHHHHHHHHHHHcC
Confidence 2225667777777665
No 114
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.72 E-value=1.2e-05 Score=57.05 Aligned_cols=64 Identities=13% Similarity=-0.026 Sum_probs=46.0
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+| +|++.|+++. . ..+++++|+ +.+|+++++||+|+|..+.+++... ..+..++..+++.|+
T Consensus 95 vD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Iis~~~~~~l~~~--------~~~~~~l~~~~r~Lk 164 (349)
T 3q7e_A 95 IECS-SISDYAVKIVKANKLDHVVTIIKGKV-EEVELPVEKVDIIISEWMGYCLFYE--------SMLNTVLHARDKWLA 164 (349)
T ss_dssp EECS-THHHHHHHHHHHTTCTTTEEEEESCT-TTCCCSSSCEEEEEECCCBBTBTBT--------CCHHHHHHHHHHHEE
T ss_pred ECcH-HHHHHHHHHHHHcCCCCcEEEEECcH-HHccCCCCceEEEEEccccccccCc--------hhHHHHHHHHHHhCC
Confidence 5899 5999998763 1 158999998 6789989999999998765554322 224456666666664
No 115
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.70 E-value=8.9e-06 Score=56.76 Aligned_cols=64 Identities=13% Similarity=0.091 Sum_probs=44.0
Q ss_pred CCCCHHHHHHHHhcC---------CCCcEEEccCCCCCCC--CCCceeeeeeccchhhhcccCCCCCChHHHH--HHHHH
Q psy4109 1 MKKNAFYTNVARDRE---------VEGDLVLSDLGQGVPF--RAGAFDGAISISALQWLCNADKTSHNPAKRL--YKFFS 67 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---------~~~~~~~~D~~~~lPf--~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l--~~~~~ 67 (77)
+|+|++|++.|+++. +..+++.+|+ ..++. .+++||+|++....++. |...| +++|+
T Consensus 125 vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~-~~~~~~~~~~~fDvIi~d~~~~~~---------~~~~l~~~~~l~ 194 (304)
T 3bwc_A 125 VDIDGEVMEQSKQHFPQISRSLADPRATVRVGDG-LAFVRQTPDNTYDVVIIDTTDPAG---------PASKLFGEAFYK 194 (304)
T ss_dssp EESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH-HHHHHSSCTTCEEEEEEECC------------------CCHHHHH
T ss_pred EECCHHHHHHHHHHhHHhhcccCCCcEEEEECcH-HHHHHhccCCceeEEEECCCCccc---------cchhhhHHHHHH
Confidence 599999999999875 2457899997 44554 47899999998765432 33444 67888
Q ss_pred HHHHHHh
Q psy4109 68 SLFACLW 74 (77)
Q Consensus 68 ~l~~~L~ 74 (77)
.++++|+
T Consensus 195 ~~~~~Lk 201 (304)
T 3bwc_A 195 DVLRILK 201 (304)
T ss_dssp HHHHHEE
T ss_pred HHHHhcC
Confidence 8888876
No 116
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.69 E-value=1.9e-05 Score=50.96 Aligned_cols=49 Identities=16% Similarity=-0.088 Sum_probs=39.6
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcc
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCN 50 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d 50 (77)
+|+|++|++.|+++. .+.+++++|+. ..+..+++||.|+++.+++|+.+
T Consensus 105 vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~D~i~~~~~~~~~~~ 158 (210)
T 3lbf_A 105 VERIKGLQWQARRRLKNLDLHNVSTRHGDGW-QGWQARAPFDAIIVTAAPPEIPT 158 (210)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEESCGG-GCCGGGCCEEEEEESSBCSSCCT
T ss_pred EecCHHHHHHHHHHHHHcCCCceEEEECCcc-cCCccCCCccEEEEccchhhhhH
Confidence 599999999999874 23688999974 45556889999999999988753
No 117
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.69 E-value=1.5e-05 Score=51.41 Aligned_cols=45 Identities=16% Similarity=0.067 Sum_probs=35.9
Q ss_pred CCCCHHHHHHHHhcC----C-CCcEEEccCCCCCCCCCCceeeeeeccchhhh
Q psy4109 1 MKKNAFYTNVARDRE----V-EGDLVLSDLGQGVPFRAGAFDGAISISALQWL 48 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~-~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~ 48 (77)
+|+|+.|++.|+++. . +.+++++|+. ++.+++||+|+++.+++++
T Consensus 89 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~---~~~~~~fD~i~~~~~~~~~ 138 (205)
T 3grz_A 89 TDISDESMTAAEENAALNGIYDIALQKTSLL---ADVDGKFDLIVANILAEIL 138 (205)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCCEEEESSTT---TTCCSCEEEEEEESCHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEecccc---ccCCCCceEEEECCcHHHH
Confidence 599999999999873 2 2688999973 3457899999999888764
No 118
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.68 E-value=1.3e-05 Score=56.98 Aligned_cols=57 Identities=9% Similarity=0.054 Sum_probs=42.3
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. .+.+++++|+ ..+| +++||+|++.... . ...++|+++++.|+
T Consensus 152 IDis~~~l~~Ar~~~~~~gl~~v~~v~gDa-~~l~--d~~FDvV~~~a~~----------~----d~~~~l~el~r~Lk 213 (298)
T 3fpf_A 152 VEIEPDIAELSRKVIEGLGVDGVNVITGDE-TVID--GLEFDVLMVAALA----------E----PKRRVFRNIHRYVD 213 (298)
T ss_dssp EESSHHHHHHHHHHHHHHTCCSEEEEESCG-GGGG--GCCCSEEEECTTC----------S----CHHHHHHHHHHHCC
T ss_pred EECCHHHHHHHHHHHHhcCCCCeEEEECch-hhCC--CCCcCEEEECCCc----------c----CHHHHHHHHHHHcC
Confidence 599999999999873 2458999997 4576 7899999986541 1 23457777777765
No 119
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.64 E-value=3.7e-05 Score=54.65 Aligned_cols=63 Identities=14% Similarity=0.041 Sum_probs=48.9
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHhh
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLWS 75 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~~ 75 (77)
+||++.|++.++++. +..++.++|.. .+-.++.||+++++-+++.+++..+.. .| +|+.+|+.
T Consensus 162 ~DId~~~le~a~~~l~~~g~~~~~~v~D~~--~~~p~~~~DvaL~lkti~~Le~q~kg~---------g~-~ll~aL~~ 228 (281)
T 3lcv_B 162 SDIDARLVGFVDEALTRLNVPHRTNVADLL--EDRLDEPADVTLLLKTLPCLETQQRGS---------GW-EVIDIVNS 228 (281)
T ss_dssp EESBHHHHHHHHHHHHHTTCCEEEEECCTT--TSCCCSCCSEEEETTCHHHHHHHSTTH---------HH-HHHHHSSC
T ss_pred EeCCHHHHHHHHHHHHhcCCCceEEEeeec--ccCCCCCcchHHHHHHHHHhhhhhhHH---------HH-HHHHHhCC
Confidence 599999999999874 44678889974 344688899999999999998876544 44 66666653
No 120
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.64 E-value=1.8e-05 Score=51.80 Aligned_cols=48 Identities=19% Similarity=0.124 Sum_probs=38.5
Q ss_pred CCCCHHHHHHHHhcCC---CCcEEEccCCCCCCCCCCceeeeeeccchhhhc
Q psy4109 1 MKKNAFYTNVARDREV---EGDLVLSDLGQGVPFRAGAFDGAISISALQWLC 49 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~---~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~ 49 (77)
+|+|++|++.|+++.. +.+++++|+.+.+| .+++||.|++..+++++.
T Consensus 98 vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~~ 148 (231)
T 1vbf_A 98 VEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAPTLL 148 (231)
T ss_dssp EESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBSSCC
T ss_pred EeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHHHHH
Confidence 5899999999998853 46789999754343 578999999999998763
No 121
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.62 E-value=3.2e-05 Score=54.21 Aligned_cols=53 Identities=21% Similarity=0.061 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCC
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTS 55 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~ 55 (77)
+||+++|++.|+++. +...+.++|.. ..| .+++||+++++-++|.+++..+..
T Consensus 132 ~DId~~~i~~ar~~~~~~g~~~~~~v~D~~-~~~-~~~~~DvvLllk~lh~LE~q~~~~ 188 (253)
T 3frh_A 132 CDIHQGLGDVITPFAREKDWDFTFALQDVL-CAP-PAEAGDLALIFKLLPLLEREQAGS 188 (253)
T ss_dssp EESBHHHHHHHHHHHHHTTCEEEEEECCTT-TSC-CCCBCSEEEEESCHHHHHHHSTTH
T ss_pred EeCCHHHHHHHHHHHHhcCCCceEEEeecc-cCC-CCCCcchHHHHHHHHHhhhhchhh
Confidence 599999999999774 44578999974 344 456899999999999998876544
No 122
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.59 E-value=7.1e-05 Score=48.20 Aligned_cols=59 Identities=17% Similarity=0.067 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.|+++. .+.+++++|+.+.++ ..++||.|++..+++ .+.++++.+++.|+
T Consensus 70 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~~~--------------~~~~~l~~~~~~Lk 133 (204)
T 3e05_A 70 LERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-DLPDPDRVFIGGSGG--------------MLEEIIDAVDRRLK 133 (204)
T ss_dssp EECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-TSCCCSEEEESCCTT--------------CHHHHHHHHHHHCC
T ss_pred EeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-cCCCCCEEEECCCCc--------------CHHHHHHHHHHhcC
Confidence 599999999998764 246889999754443 347799999997653 23456777776665
No 123
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.59 E-value=2.4e-05 Score=53.23 Aligned_cols=50 Identities=10% Similarity=0.009 Sum_probs=38.5
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccC
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNAD 52 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~ 52 (77)
+|+|++|++.|+++. ...++..+|... ...+++||+|++..++|.+++..
T Consensus 79 ~Di~~~~leiar~~~~~~g~~~~v~~~d~~~--~~~~~~~DvVLa~k~LHlL~~~~ 132 (200)
T 3fzg_A 79 YDIDRAEIAFLSSIIGKLKTTIKYRFLNKES--DVYKGTYDVVFLLKMLPVLKQQD 132 (200)
T ss_dssp ECSCHHHHHHHHHHHHHSCCSSEEEEECCHH--HHTTSEEEEEEEETCHHHHHHTT
T ss_pred EeCCHHHHHHHHHHHHhcCCCccEEEecccc--cCCCCCcChhhHhhHHHhhhhhH
Confidence 599999999999875 222566677633 34689999999999999995543
No 124
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.58 E-value=9.4e-05 Score=51.76 Aligned_cols=61 Identities=15% Similarity=0.050 Sum_probs=46.0
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+ ++|++.|+++. . ..+++++|+.+.+| . .||+|++..++|++.+ ....++++++++.|+
T Consensus 212 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~-~~D~v~~~~vl~~~~~---------~~~~~~l~~~~~~L~ 278 (374)
T 1qzz_A 212 VEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLP--V-TADVVLLSFVLLNWSD---------EDALTILRGCVRALE 278 (374)
T ss_dssp EEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS--C-CEEEEEEESCGGGSCH---------HHHHHHHHHHHHHEE
T ss_pred EeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC--C-CCCEEEEeccccCCCH---------HHHHHHHHHHHHhcC
Confidence 588 99999998763 1 36889999855444 3 3999999999998744 334568888888775
No 125
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.57 E-value=2.3e-05 Score=54.60 Aligned_cols=63 Identities=13% Similarity=0.093 Sum_probs=47.1
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCC-CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVP-FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lP-f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+ ++|++.|+++. ...+++.+|+.+ .| +.++.||+|++..++|++.+ +...+++++++++|
T Consensus 209 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~D~v~~~~vlh~~~~---------~~~~~~l~~~~~~L 277 (352)
T 3mcz_A 209 WDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLD-ARNFEGGAADVVMLNDCLHYFDA---------REAREVIGHAAGLV 277 (352)
T ss_dssp EEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTC-GGGGTTCCEEEEEEESCGGGSCH---------HHHHHHHHHHHHTE
T ss_pred EEC-HHHHHHHHHHHHhcCCCCceEEEeCCccc-CcccCCCCccEEEEecccccCCH---------HHHHHHHHHHHHHc
Confidence 478 78999998763 136889999854 44 35667999999999998844 34567888888877
Q ss_pred h
Q psy4109 74 W 74 (77)
Q Consensus 74 ~ 74 (77)
+
T Consensus 278 ~ 278 (352)
T 3mcz_A 278 K 278 (352)
T ss_dssp E
T ss_pred C
Confidence 5
No 126
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.56 E-value=3.7e-05 Score=49.74 Aligned_cols=44 Identities=20% Similarity=0.247 Sum_probs=34.3
Q ss_pred CcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 18 GDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 18 ~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
.+++++|+ ..+|+.+++||+|+++.++|| .+ ...+++++++.|+
T Consensus 99 ~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~-~~-----------~~~~l~~~~~~L~ 142 (215)
T 2zfu_A 99 PRVTVCDM-AQVPLEDESVDVAVFCLSLMG-TN-----------IRDFLEEANRVLK 142 (215)
T ss_dssp TTEEESCT-TSCSCCTTCEEEEEEESCCCS-SC-----------HHHHHHHHHHHEE
T ss_pred ceEEEecc-ccCCCCCCCEeEEEEehhccc-cC-----------HHHHHHHHHHhCC
Confidence 57889997 569999999999999999974 22 2457777777765
No 127
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.53 E-value=2.1e-05 Score=54.73 Aligned_cols=66 Identities=17% Similarity=0.153 Sum_probs=43.4
Q ss_pred CCCCHHHHHHHHhcC---------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHH--HHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE---------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRL--YKFFSSL 69 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l--~~~~~~l 69 (77)
+|+|++|++.|+++. +..+++++|+.+.++..+++||+|++...-.|+ .|...| +++|+.+
T Consensus 120 vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~--------~~~~~l~~~~~l~~~ 191 (296)
T 1inl_A 120 CEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTA--------GQGGHLFTEEFYQAC 191 (296)
T ss_dssp EESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC------------------CCSHHHHHHH
T ss_pred EECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCCCccc--------CchhhhhHHHHHHHH
Confidence 599999999999874 235789999644355567899999997543332 122333 6788888
Q ss_pred HHHHh
Q psy4109 70 FACLW 74 (77)
Q Consensus 70 ~~~L~ 74 (77)
++.|+
T Consensus 192 ~~~Lk 196 (296)
T 1inl_A 192 YDALK 196 (296)
T ss_dssp HHHEE
T ss_pred HHhcC
Confidence 88775
No 128
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.53 E-value=1.6e-05 Score=51.88 Aligned_cols=46 Identities=4% Similarity=-0.068 Sum_probs=36.7
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccchh
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISALQ 46 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~ 46 (77)
+|+|++|++.|+++. .+.+++++|+.+.+|+.+++||.|+++..++
T Consensus 83 vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 83 IEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred EECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 599999999999774 2468899997444677788999999987654
No 129
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.53 E-value=3.1e-05 Score=53.34 Aligned_cols=67 Identities=9% Similarity=-0.056 Sum_probs=45.2
Q ss_pred CCCCHHHHHHHHhcC---------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE---------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFA 71 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~ 71 (77)
+|++++|++.|+++. +..+++.+|+.+-++..+++||+|++....++... .+. .-+++|+.+++
T Consensus 105 vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~----~~l---~~~~~~~~~~~ 177 (275)
T 1iy9_A 105 VDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPA----VNL---FTKGFYAGIAK 177 (275)
T ss_dssp EESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCCSCC----CCC---STTHHHHHHHH
T ss_pred EECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCCCcc----hhh---hHHHHHHHHHH
Confidence 589999999999864 23588999974435555789999999865433211 000 11467777777
Q ss_pred HHh
Q psy4109 72 CLW 74 (77)
Q Consensus 72 ~L~ 74 (77)
.|+
T Consensus 178 ~L~ 180 (275)
T 1iy9_A 178 ALK 180 (275)
T ss_dssp HEE
T ss_pred hcC
Confidence 775
No 130
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=97.51 E-value=9.6e-05 Score=52.34 Aligned_cols=61 Identities=8% Similarity=0.049 Sum_probs=46.6
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+ ++|++.|+++. ...+++.+|+. .|++. .||+|++..++|++.+ ...++++++++++|+
T Consensus 232 ~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~--~~~p~-~~D~v~~~~vlh~~~d---------~~~~~~L~~~~~~L~ 298 (369)
T 3gwz_A 232 LER-PPVAEEARELLTGRGLADRCEILPGDFF--ETIPD-GADVYLIKHVLHDWDD---------DDVVRILRRIATAMK 298 (369)
T ss_dssp EEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT--TCCCS-SCSEEEEESCGGGSCH---------HHHHHHHHHHHTTCC
T ss_pred EcC-HHHHHHHHHhhhhcCcCCceEEeccCCC--CCCCC-CceEEEhhhhhccCCH---------HHHHHHHHHHHHHcC
Confidence 488 99999998763 23689999985 35544 7999999999998854 344567888887775
No 131
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.49 E-value=1.4e-05 Score=56.12 Aligned_cols=68 Identities=21% Similarity=0.146 Sum_probs=48.0
Q ss_pred CCCCHHHHHHHHhcC----------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHH--HHHHHH
Q psy4109 1 MKKNAFYTNVARDRE----------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRL--YKFFSS 68 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l--~~~~~~ 68 (77)
+|+|++|++.|+++. +..+++.+|+.+-++..+++||+|++....+|- ...|...| +++|+.
T Consensus 107 vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~------~~~~~~~l~~~~~l~~ 180 (314)
T 1uir_A 107 VDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVG------EDNPARLLYTVEFYRL 180 (314)
T ss_dssp EESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCCCBS------TTCGGGGGSSHHHHHH
T ss_pred EECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEECCCCccc------ccCcchhccHHHHHHH
Confidence 589999999999764 235789999743355568899999998765541 01223333 678888
Q ss_pred HHHHHh
Q psy4109 69 LFACLW 74 (77)
Q Consensus 69 l~~~L~ 74 (77)
+++.|+
T Consensus 181 ~~~~Lk 186 (314)
T 1uir_A 181 VKAHLN 186 (314)
T ss_dssp HHHTEE
T ss_pred HHHhcC
Confidence 888775
No 132
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.48 E-value=4.5e-05 Score=51.74 Aligned_cols=45 Identities=11% Similarity=0.014 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccchhh
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISALQW 47 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w 47 (77)
+|+|++|++.|+++. .+.+++++|+.+ ++.+++||.|+|+..+.+
T Consensus 139 vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~--~~~~~~fD~Iv~npPy~~ 188 (276)
T 2b3t_A 139 VDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS--ALAGQQFAMIVSNPPYID 188 (276)
T ss_dssp ECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG--GGTTCCEEEEEECCCCBC
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEEcchhh--hcccCCccEEEECCCCCC
Confidence 599999999999873 246889999754 445789999999965443
No 133
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=97.48 E-value=6.3e-05 Score=52.03 Aligned_cols=61 Identities=16% Similarity=0.020 Sum_probs=46.9
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+ ++|++.|+++. ...+++.+|+.+ |++ ++||+|++..++|++.+ ....+++++++++|+
T Consensus 197 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~-~~~D~v~~~~vl~~~~~---------~~~~~~l~~~~~~L~ 263 (334)
T 2ip2_A 197 LDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ--EVP-SNGDIYLLSRIIGDLDE---------AASLRLLGNCREAMA 263 (334)
T ss_dssp EEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT--CCC-SSCSEEEEESCGGGCCH---------HHHHHHHHHHHHHSC
T ss_pred eCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC--CCC-CCCCEEEEchhccCCCH---------HHHHHHHHHHHHhcC
Confidence 488 99999998874 246889999854 443 67999999999987643 344678888888876
No 134
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.48 E-value=2e-05 Score=55.68 Aligned_cols=65 Identities=22% Similarity=0.145 Sum_probs=42.1
Q ss_pred CCCCHHHHHHHHhcCC---------CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHH--HHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV---------EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRL--YKFFSSL 69 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~---------~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l--~~~~~~l 69 (77)
+|+|++|++.|+++.. ..+++.+|+.+.++..+++||+|++...-++ .|.+.+ +++|+.+
T Consensus 138 vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~---------~~~~~l~t~~~l~~~ 208 (314)
T 2b2c_A 138 CEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPV---------GPAESLFGQSYYELL 208 (314)
T ss_dssp ECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC----------------------HHHHH
T ss_pred EECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCC---------CcchhhhHHHHHHHH
Confidence 5999999999998752 2478888864334556789999999764221 123444 6888888
Q ss_pred HHHHh
Q psy4109 70 FACLW 74 (77)
Q Consensus 70 ~~~L~ 74 (77)
++.|+
T Consensus 209 ~~~Lk 213 (314)
T 2b2c_A 209 RDALK 213 (314)
T ss_dssp HHHEE
T ss_pred HhhcC
Confidence 88875
No 135
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.46 E-value=1.8e-05 Score=55.88 Aligned_cols=65 Identities=15% Similarity=0.173 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHHhcCC---------CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHH--HHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV---------EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRL--YKFFSSL 69 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~---------~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l--~~~~~~l 69 (77)
+|+|++|++.|+++.. ..+++++|+.+.++..+++||+|++...-.| .|...+ +++|+.+
T Consensus 146 vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~---------~~~~~l~~~~~l~~~ 216 (321)
T 2pt6_A 146 CEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPI---------GPAETLFNQNFYEKI 216 (321)
T ss_dssp EESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCSS---------SGGGGGSSHHHHHHH
T ss_pred EECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCcCCC---------CcchhhhHHHHHHHH
Confidence 5999999999998743 3478899964334445789999999753221 123333 6788888
Q ss_pred HHHHh
Q psy4109 70 FACLW 74 (77)
Q Consensus 70 ~~~L~ 74 (77)
++.|+
T Consensus 217 ~~~Lk 221 (321)
T 2pt6_A 217 YNALK 221 (321)
T ss_dssp HHHEE
T ss_pred HHhcC
Confidence 88775
No 136
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.45 E-value=2.2e-05 Score=54.30 Aligned_cols=65 Identities=15% Similarity=0.173 Sum_probs=46.5
Q ss_pred CCCCHHHHHHHHhcCC---------CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHH--HHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV---------EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRL--YKFFSSL 69 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~---------~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l--~~~~~~l 69 (77)
+|++++|++.|+++.. ..+++++|+.+.++..+++||+|++....++ .|...| +++|+.+
T Consensus 108 vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~---------~~~~~l~~~~~l~~~ 178 (283)
T 2i7c_A 108 CEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPI---------GPAETLFNQNFYEKI 178 (283)
T ss_dssp EESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCTT---------TGGGGGSSHHHHHHH
T ss_pred EECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcCCCCC---------CcchhhhHHHHHHHH
Confidence 5899999999998752 3478899974334444789999999764332 223344 6788888
Q ss_pred HHHHh
Q psy4109 70 FACLW 74 (77)
Q Consensus 70 ~~~L~ 74 (77)
++.|+
T Consensus 179 ~~~L~ 183 (283)
T 2i7c_A 179 YNALK 183 (283)
T ss_dssp HHHEE
T ss_pred HHhcC
Confidence 88875
No 137
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.45 E-value=7e-05 Score=52.07 Aligned_cols=47 Identities=9% Similarity=-0.090 Sum_probs=37.9
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccchhhh
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWL 48 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~ 48 (77)
+|+|++|++.|+++. .+.+++++|+. ..+..+++||.|++..+++++
T Consensus 106 vD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~-~~~~~~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 106 VEYSRKICEIAKRNVERLGIENVIFVCGDGY-YGVPEFSPYDVIFVTVGVDEV 157 (317)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEESCGG-GCCGGGCCEEEEEECSBBSCC
T ss_pred EECCHHHHHHHHHHHHHcCCCCeEEEECChh-hccccCCCeEEEEEcCCHHHH
Confidence 589999999999873 23688999974 444467899999999999876
No 138
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.43 E-value=2.9e-05 Score=51.58 Aligned_cols=43 Identities=7% Similarity=0.062 Sum_probs=34.6
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCC-CCCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVP-FRAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lP-f~~~sFD~v~s~~ 43 (77)
+|+|++|++.|+++. .+.+++++|+.+.+| ..+++||.|++..
T Consensus 101 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 101 IERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp EECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 599999999999774 146899999866566 6689999999764
No 139
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.42 E-value=0.00013 Score=51.39 Aligned_cols=70 Identities=11% Similarity=0.034 Sum_probs=46.9
Q ss_pred CCCCHHHHHHHHhcCC-----CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREV-----EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~-----~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++.. ..+++++|+ ..+|...+.||.|+++.-+.+-... .....+..+.+++.+.+.|+
T Consensus 234 ~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~-~~~~~~~~~~D~Ii~npPyg~r~~~---~~~~~~~~~~~~~~~~~~Lk 308 (354)
T 3tma_A 234 GDLDEKRLGLAREAALASGLSWIRFLRADA-RHLPRFFPEVDRILANPPHGLRLGR---KEGLFHLYWDFLRGALALLP 308 (354)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCEEEECCG-GGGGGTCCCCSEEEECCCSCC-------CHHHHHHHHHHHHHHHHTSC
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEeCCh-hhCccccCCCCEEEECCCCcCccCC---cccHHHHHHHHHHHHHHhcC
Confidence 5999999999998742 468999998 5688888889999998766442111 11122223556666666553
No 140
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.42 E-value=1.9e-05 Score=52.48 Aligned_cols=42 Identities=5% Similarity=-0.045 Sum_probs=33.9
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCC---CCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFR---AGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~---~~sFD~v~s~~ 43 (77)
+|+|++|++.|+++. .+.+++++|+ +.+|+. +++||.|+|..
T Consensus 100 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 100 VDSLNKRITFLEKLSEALQLENTTFCHDRA-ETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp EESCHHHHHHHHHHHHHHTCSSEEEEESCH-HHHTTCTTTTTCEEEEEEEC
T ss_pred EeCCHHHHHHHHHHHHHcCCCCEEEEeccH-HHhcccccccCCccEEEEec
Confidence 599999999998762 2468899997 567764 68999999976
No 141
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.41 E-value=7.4e-05 Score=52.81 Aligned_cols=59 Identities=14% Similarity=0.008 Sum_probs=45.7
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+ ++|++.|++. ...+++.+|+.+ |+++ ||+|++..++|++.| ....+++++++++|+
T Consensus 239 ~D~-~~~~~~a~~~-~~v~~~~~d~~~--~~~~--~D~v~~~~~lh~~~d---------~~~~~~l~~~~~~L~ 297 (372)
T 1fp1_D 239 FDL-PQVIENAPPL-SGIEHVGGDMFA--SVPQ--GDAMILKAVCHNWSD---------EKCIEFLSNCHKALS 297 (372)
T ss_dssp EEC-HHHHTTCCCC-TTEEEEECCTTT--CCCC--EEEEEEESSGGGSCH---------HHHHHHHHHHHHHEE
T ss_pred eCh-HHHHHhhhhc-CCCEEEeCCccc--CCCC--CCEEEEecccccCCH---------HHHHHHHHHHHHhcC
Confidence 488 9999988764 457899999854 5544 999999999998854 334578888888875
No 142
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.40 E-value=2.8e-05 Score=54.51 Aligned_cols=67 Identities=13% Similarity=-0.053 Sum_probs=43.6
Q ss_pred CCCCHHHHHHHHhcC---------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE---------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFA 71 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~ 71 (77)
+|+|++|++.|+++. +..+++.+|+.+-++..+++||+|++....++-. ......+++|+.+++
T Consensus 125 vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~~~~~~-------~~~l~~~~~l~~~~~ 197 (304)
T 2o07_A 125 CEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGP-------AESLFKESYYQLMKT 197 (304)
T ss_dssp EESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEECC------------------CHHHHHHHH
T ss_pred EECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEECCCCCCCc-------chhhhHHHHHHHHHh
Confidence 589999999999864 2357889996433555678999999976543311 111123568888888
Q ss_pred HHh
Q psy4109 72 CLW 74 (77)
Q Consensus 72 ~L~ 74 (77)
.|+
T Consensus 198 ~Lk 200 (304)
T 2o07_A 198 ALK 200 (304)
T ss_dssp HEE
T ss_pred ccC
Confidence 775
No 143
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.39 E-value=9.6e-05 Score=51.82 Aligned_cols=61 Identities=7% Similarity=0.023 Sum_probs=46.9
Q ss_pred CCCCHHHHHHHHhcC-----C-CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE-----V-EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~-~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+ ++|++.|+++. . ..+++.+|+ ...|+.++ |+|++..++|++.+ +...+++++++++|+
T Consensus 220 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~--D~v~~~~vlh~~~d---------~~~~~~l~~~~~~L~ 286 (359)
T 1x19_A 220 LNL-PGAIDLVNENAAEKGVADRMRGIAVDI-YKESYPEA--DAVLFCRILYSANE---------QLSTIMCKKAFDAMR 286 (359)
T ss_dssp EEC-GGGHHHHHHHHHHTTCTTTEEEEECCT-TTSCCCCC--SEEEEESCGGGSCH---------HHHHHHHHHHHTTCC
T ss_pred Eec-HHHHHHHHHHHHhcCCCCCEEEEeCcc-ccCCCCCC--CEEEEechhccCCH---------HHHHHHHHHHHHhcC
Confidence 588 99999998762 2 268899998 45677654 99999999987743 456778888887775
No 144
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.36 E-value=4.5e-06 Score=51.30 Aligned_cols=57 Identities=9% Similarity=-0.105 Sum_probs=36.8
Q ss_pred CCcEEEccCCCCCC--------CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 17 EGDLVLSDLGQGVP--------FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 17 ~~~~~~~D~~~~lP--------f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
..+++++|+ ..+| +.+++||.|+++.+++|..+.........+.+..+++++++.|+
T Consensus 63 ~~~~~~~d~-~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 127 (180)
T 1ej0_A 63 GVDFLQGDF-RDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLA 127 (180)
T ss_dssp TEEEEESCT-TSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred cEEEEEccc-ccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcC
Confidence 357888997 4566 77899999999999888743211000001122677777777765
No 145
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.35 E-value=1.6e-05 Score=59.15 Aligned_cols=57 Identities=18% Similarity=0.167 Sum_probs=42.7
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCC------CCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFR------AGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~------~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|. .+..+.+++++|+ ..+||. +++||+|+|.++ |++. ...++|+++++.|+
T Consensus 253 VDiSp~m~----~~~~rI~fv~GDa-~dlpf~~~l~~~d~sFDlVisdgs-H~~~-----------d~~~aL~el~rvLK 315 (419)
T 3sso_A 253 LDIMDKSH----VDELRIRTIQGDQ-NDAEFLDRIARRYGPFDIVIDDGS-HINA-----------HVRTSFAALFPHVR 315 (419)
T ss_dssp EESSCCGG----GCBTTEEEEECCT-TCHHHHHHHHHHHCCEEEEEECSC-CCHH-----------HHHHHHHHHGGGEE
T ss_pred EECCHHHh----hcCCCcEEEEecc-cccchhhhhhcccCCccEEEECCc-ccch-----------hHHHHHHHHHHhcC
Confidence 58999983 2344678999998 578887 799999999865 4442 34567888887775
No 146
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.35 E-value=0.00013 Score=51.18 Aligned_cols=60 Identities=8% Similarity=-0.006 Sum_probs=46.3
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHhh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLWS 75 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~~ 75 (77)
+|+ ++|++.|++. ...+++.+|+.+ |+++ ||+|++..++|++.| ....+++++++++|+.
T Consensus 218 ~D~-~~~~~~a~~~-~~v~~~~~d~~~--~~p~--~D~v~~~~~lh~~~d---------~~~~~~l~~~~~~L~p 277 (352)
T 1fp2_A 218 FDR-PQVVENLSGS-NNLTYVGGDMFT--SIPN--ADAVLLKYILHNWTD---------KDCLRILKKCKEAVTN 277 (352)
T ss_dssp EEC-HHHHTTCCCB-TTEEEEECCTTT--CCCC--CSEEEEESCGGGSCH---------HHHHHHHHHHHHHHSG
T ss_pred eeC-HHHHhhcccC-CCcEEEeccccC--CCCC--ccEEEeehhhccCCH---------HHHHHHHHHHHHhCCC
Confidence 488 9999998764 347899999854 4432 999999999998744 3455788999988864
No 147
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.35 E-value=1.5e-06 Score=55.63 Aligned_cols=46 Identities=13% Similarity=-0.074 Sum_probs=23.6
Q ss_pred CCCCHHHHHHHHhcCC----CCcEEEccCCCCCCCCC-----Cceeeeeeccchhhh
Q psy4109 1 MKKNAFYTNVARDREV----EGDLVLSDLGQGVPFRA-----GAFDGAISISALQWL 48 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~----~~~~~~~D~~~~lPf~~-----~sFD~v~s~~~l~w~ 48 (77)
+|+|+.|++.|+++.. +.+++++|+.+ |+.+ ++||+|+++..+++.
T Consensus 60 vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~fD~i~~npp~~~~ 114 (215)
T 4dzr_A 60 VDLSMDALAVARRNAERFGAVVDWAAADGIE--WLIERAERGRPWHAIVSNPPYIPT 114 (215)
T ss_dssp EECC-------------------CCHHHHHH--HHHHHHHTTCCBSEEEECCCCCC-
T ss_pred EECCHHHHHHHHHHHHHhCCceEEEEcchHh--hhhhhhhccCcccEEEECCCCCCC
Confidence 5999999999998753 46788999743 6666 999999998665443
No 148
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.35 E-value=0.00011 Score=47.16 Aligned_cols=45 Identities=9% Similarity=-0.020 Sum_probs=36.4
Q ss_pred CCCCHHHHHHHHhcCC----CCcEEEccCCCCCCCCCCceeeeeeccchhhhc
Q psy4109 1 MKKNAFYTNVARDREV----EGDLVLSDLGQGVPFRAGAFDGAISISALQWLC 49 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~----~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~ 49 (77)
+|+|+.|++.|+++.. ..+++++|+ ..+| ++||.|+++..+++..
T Consensus 78 vD~~~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~---~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 78 VEVDKEAVDVLIENLGEFKGKFKVFIGDV-SEFN---SRVDIVIMNPPFGSQR 126 (207)
T ss_dssp EESCHHHHHHHHHHTGGGTTSEEEEESCG-GGCC---CCCSEEEECCCCSSSS
T ss_pred EECCHHHHHHHHHHHHHcCCCEEEEECch-HHcC---CCCCEEEEcCCCcccc
Confidence 5999999999998753 468899997 4454 5899999999887763
No 149
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.34 E-value=0.00014 Score=47.59 Aligned_cols=44 Identities=5% Similarity=-0.156 Sum_probs=32.8
Q ss_pred CCCCHHHHHHHHhcC-----C-CCcEEEccCCCCCCCCCCceeeeeeccch
Q psy4109 1 MKKNAFYTNVARDRE-----V-EGDLVLSDLGQGVPFRAGAFDGAISISAL 45 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~-~~~~~~~D~~~~lPf~~~sFD~v~s~~~l 45 (77)
+|+|++|++.|+++. . +.+++++|+.+.++ ..+.||+|++..++
T Consensus 83 vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~-~~~~~D~v~~~~~~ 132 (204)
T 3njr_A 83 IEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA-DLPLPEAVFIGGGG 132 (204)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT-TSCCCSEEEECSCC
T ss_pred EeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc-cCCCCCEEEECCcc
Confidence 599999999998773 2 46889999744244 34579999987643
No 150
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.34 E-value=7.4e-05 Score=53.45 Aligned_cols=63 Identities=13% Similarity=0.035 Sum_probs=45.4
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+| +|++.|+++. . ..+++++|+ +.+++. ++||+|+|..+.+++... ..+..+++.+++.|+
T Consensus 92 vD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~-~~~D~Iv~~~~~~~l~~e--------~~~~~~l~~~~~~Lk 160 (376)
T 3r0q_C 92 VEAT-KMADHARALVKANNLDHIVEVIEGSV-EDISLP-EKVDVIISEWMGYFLLRE--------SMFDSVISARDRWLK 160 (376)
T ss_dssp EESS-TTHHHHHHHHHHTTCTTTEEEEESCG-GGCCCS-SCEEEEEECCCBTTBTTT--------CTHHHHHHHHHHHEE
T ss_pred EccH-HHHHHHHHHHHHcCCCCeEEEEECch-hhcCcC-CcceEEEEcChhhcccch--------HHHHHHHHHHHhhCC
Confidence 5899 9999998764 1 258999998 567766 899999998766655322 234566777777664
No 151
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.33 E-value=7.5e-05 Score=48.25 Aligned_cols=48 Identities=10% Similarity=0.016 Sum_probs=37.0
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhc
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLC 49 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~ 49 (77)
+|+|++|++.|+++. .+.+++++|+...+| .+++||.|+++.+++++.
T Consensus 108 vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~~ 160 (215)
T 2yxe_A 108 IERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTTAAGPKIP 160 (215)
T ss_dssp EESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEESSBBSSCC
T ss_pred EeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEECCchHHHH
Confidence 589999999999873 236788899743332 378899999999998763
No 152
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.32 E-value=4.1e-05 Score=52.78 Aligned_cols=64 Identities=22% Similarity=0.188 Sum_probs=43.6
Q ss_pred CCCCHHHHHHHHhcC---------------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHH--H
Q psy4109 1 MKKNAFYTNVARDRE---------------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRL--Y 63 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---------------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l--~ 63 (77)
+|+|++|++.|+++. +..+++.+|+.+-++. +++||+|++....+| .+.+.+ +
T Consensus 104 vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~d~~~~~---------~~~~~l~~~ 173 (281)
T 1mjf_A 104 VEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFDVIIADSTDPV---------GPAKVLFSE 173 (281)
T ss_dssp EESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEEEEEEECCCCC--------------TTSH
T ss_pred EECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCeeEEEECCCCCC---------CcchhhhHH
Confidence 589999999999764 2357888886433444 788999999765322 123444 7
Q ss_pred HHHHHHHHHHh
Q psy4109 64 KFFSSLFACLW 74 (77)
Q Consensus 64 ~~~~~l~~~L~ 74 (77)
++|+.+++.|+
T Consensus 174 ~~l~~~~~~L~ 184 (281)
T 1mjf_A 174 EFYRYVYDALN 184 (281)
T ss_dssp HHHHHHHHHEE
T ss_pred HHHHHHHHhcC
Confidence 78888888875
No 153
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.30 E-value=0.00015 Score=50.86 Aligned_cols=64 Identities=14% Similarity=-0.009 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+| +|++.|+++. ...+++++|+ +.+|+.+++||+|+|....+.+... ..+..++..+++.|+
T Consensus 67 vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D~Ivs~~~~~~l~~~--------~~~~~~l~~~~~~Lk 136 (328)
T 1g6q_1 67 VDMS-SIIEMAKELVELNGFSDKITLLRGKL-EDVHLPFPKVDIIISEWMGYFLLYE--------SMMDTVLYARDHYLV 136 (328)
T ss_dssp EESS-THHHHHHHHHHHTTCTTTEEEEESCT-TTSCCSSSCEEEEEECCCBTTBSTT--------CCHHHHHHHHHHHEE
T ss_pred EChH-HHHHHHHHHHHHcCCCCCEEEEECch-hhccCCCCcccEEEEeCchhhcccH--------HHHHHHHHHHHhhcC
Confidence 5899 6999998763 1357899998 5688888999999998654443221 123455666666554
No 154
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.28 E-value=0.00035 Score=46.03 Aligned_cols=59 Identities=8% Similarity=-0.113 Sum_probs=40.6
Q ss_pred CCCCHHHHHHHHhcC---CCCcEEEccCCCC----CCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE---VEGDLVLSDLGQG----VPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---~~~~~~~~D~~~~----lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|++|++.|+++. .+..++++|+ .. +|+. ++||+|+. ++.++ .....+++++++.|
T Consensus 104 vD~s~~~~~~a~~~~~~~~~v~~~~~d~-~~~~~~~~~~-~~~D~v~~-----~~~~~--------~~~~~~l~~~~~~L 168 (230)
T 1fbn_A 104 IEYAPRIMRELLDACAERENIIPILGDA-NKPQEYANIV-EKVDVIYE-----DVAQP--------NQAEILIKNAKWFL 168 (230)
T ss_dssp EESCHHHHHHHHHHTTTCTTEEEEECCT-TCGGGGTTTS-CCEEEEEE-----CCCST--------THHHHHHHHHHHHE
T ss_pred EECCHHHHHHHHHHhhcCCCeEEEECCC-CCcccccccC-ccEEEEEE-----ecCCh--------hHHHHHHHHHHHhC
Confidence 599999999998764 3457889997 45 6766 78999992 22221 23345677777766
Q ss_pred h
Q psy4109 74 W 74 (77)
Q Consensus 74 ~ 74 (77)
+
T Consensus 169 k 169 (230)
T 1fbn_A 169 K 169 (230)
T ss_dssp E
T ss_pred C
Confidence 4
No 155
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.28 E-value=0.0001 Score=45.79 Aligned_cols=42 Identities=7% Similarity=-0.015 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccc
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~ 44 (77)
+|+|+.|++.|+++. .+.+++++|+.+ ++.+++||.|+++.+
T Consensus 63 vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~--~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 63 IDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED--VLDKLEFNKAFIGGT 109 (183)
T ss_dssp EECSHHHHHHHHHHHHHTTCCSEEEEESCHHH--HGGGCCCSEEEECSC
T ss_pred EeCCHHHHHHHHHHHHHcCCCcEEEEECCccc--cccCCCCcEEEECCc
Confidence 589999999999874 246789999743 677789999999976
No 156
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.27 E-value=7.9e-05 Score=49.68 Aligned_cols=60 Identities=8% Similarity=0.019 Sum_probs=41.4
Q ss_pred CCCCHHHHHHHHhcC-------CCCcEEEccCCCCCC-CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE-------VEGDLVLSDLGQGVP-FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFAC 72 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-------~~~~~~~~D~~~~lP-f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~ 72 (77)
+|+|++|++.|+++. ...+++++|+.+.+| +.+++||.||+..... ....+|..+++.
T Consensus 87 vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~~~--------------~~~~~l~~~~~~ 152 (221)
T 3dr5_A 87 IDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVSPM--------------DLKALVDAAWPL 152 (221)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCCTT--------------THHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCcHH--------------HHHHHHHHHHHH
Confidence 599999999998773 135788998755454 3478999999864321 123467777666
Q ss_pred Hh
Q psy4109 73 LW 74 (77)
Q Consensus 73 L~ 74 (77)
|+
T Consensus 153 Lk 154 (221)
T 3dr5_A 153 LR 154 (221)
T ss_dssp EE
T ss_pred cC
Confidence 64
No 157
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.25 E-value=0.00026 Score=47.51 Aligned_cols=42 Identities=26% Similarity=0.207 Sum_probs=34.2
Q ss_pred CCCCHHHHHHHHhcC--------CCCcEEEccCCCCCCCCCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE--------VEGDLVLSDLGQGVPFRAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~--------~~~~~~~~D~~~~lPf~~~sFD~v~s~~ 43 (77)
+|+|++|++.|+++. .+.+++++|+ ...|+.+++||+|++..
T Consensus 130 vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~-~~~~~~~~~~D~v~~~~ 179 (280)
T 1i9g_A 130 YEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL-ADSELPDGSVDRAVLDM 179 (280)
T ss_dssp ECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG-GGCCCCTTCEEEEEEES
T ss_pred EeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch-HhcCCCCCceeEEEECC
Confidence 599999999998773 2467899998 45788889999999853
No 158
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.24 E-value=0.00016 Score=51.41 Aligned_cols=60 Identities=12% Similarity=0.033 Sum_probs=46.4
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHhh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLWS 75 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~~ 75 (77)
+|+ |+|++.|+++ ...+++.+|+.+ |++++ |+|++..++|++.+ +...+.+++++++|+.
T Consensus 231 ~D~-~~~~~~a~~~-~~v~~~~~D~~~--~~p~~--D~v~~~~vlh~~~d---------~~~~~~L~~~~~~L~p 290 (364)
T 3p9c_A 231 FDL-PHVISEAPQF-PGVTHVGGDMFK--EVPSG--DTILMKWILHDWSD---------QHCATLLKNCYDALPA 290 (364)
T ss_dssp EEC-HHHHTTCCCC-TTEEEEECCTTT--CCCCC--SEEEEESCGGGSCH---------HHHHHHHHHHHHHSCT
T ss_pred ecC-HHHHHhhhhc-CCeEEEeCCcCC--CCCCC--CEEEehHHhccCCH---------HHHHHHHHHHHHHcCC
Confidence 478 8999888765 457899999854 66555 99999999997743 4556788899888863
No 159
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.24 E-value=0.00016 Score=51.38 Aligned_cols=59 Identities=12% Similarity=0.015 Sum_probs=45.7
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+ ++|++.|+++ ...+++.+|+.+ |++++ |+|++..++|++.+ +...+.+++++++|+
T Consensus 233 ~D~-~~~~~~a~~~-~~v~~~~~d~~~--~~p~~--D~v~~~~vlh~~~~---------~~~~~~l~~~~~~L~ 291 (368)
T 3reo_A 233 FDL-PHVIQDAPAF-SGVEHLGGDMFD--GVPKG--DAIFIKWICHDWSD---------EHCLKLLKNCYAALP 291 (368)
T ss_dssp EEC-HHHHTTCCCC-TTEEEEECCTTT--CCCCC--SEEEEESCGGGBCH---------HHHHHHHHHHHHHSC
T ss_pred Eeh-HHHHHhhhhc-CCCEEEecCCCC--CCCCC--CEEEEechhhcCCH---------HHHHHHHHHHHHHcC
Confidence 478 8999988765 457899999854 55554 99999999998854 345678888888886
No 160
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.22 E-value=0.00043 Score=46.11 Aligned_cols=71 Identities=14% Similarity=0.082 Sum_probs=44.0
Q ss_pred CCCCHHHHHHHHhc------------C-CCCcEEEccCCCCCC--CCCCceeeeeeccchhhhcccCCCCCChHHHHHHH
Q psy4109 1 MKKNAFYTNVARDR------------E-VEGDLVLSDLGQGVP--FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKF 65 (77)
Q Consensus 1 iDiS~~ML~~A~~r------------~-~~~~~~~~D~~~~lP--f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~ 65 (77)
+|+|+.|++.|+++ + .+.+++++|+.+.+| |.+++||.|+....=-|.......... ..+.+
T Consensus 79 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~---~~~~~ 155 (246)
T 2vdv_E 79 MEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRKHKARI---ITNTL 155 (246)
T ss_dssp EESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC------CSSC---CCHHH
T ss_pred EEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccCEEEEECCCcccccchhHHhh---ccHHH
Confidence 69999999999764 2 346899999854577 889999999865322222111000000 01467
Q ss_pred HHHHHHHHh
Q psy4109 66 FSSLFACLW 74 (77)
Q Consensus 66 ~~~l~~~L~ 74 (77)
+..+++.|+
T Consensus 156 l~~~~~~Lk 164 (246)
T 2vdv_E 156 LSEYAYVLK 164 (246)
T ss_dssp HHHHHHHEE
T ss_pred HHHHHHHcC
Confidence 777777765
No 161
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.19 E-value=0.00012 Score=51.63 Aligned_cols=47 Identities=11% Similarity=0.077 Sum_probs=39.6
Q ss_pred CCCCHHHHHHHHhcC---CCCcEEEccCCCCCCCCCCceeeeeeccchhhh
Q psy4109 1 MKKNAFYTNVARDRE---VEGDLVLSDLGQGVPFRAGAFDGAISISALQWL 48 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~ 48 (77)
+|++++|++.|+++. .+.+++++|+ ..+++.+.+||.|+++..+++-
T Consensus 78 VEid~~li~~a~~~~~~~~~v~vi~gD~-l~~~~~~~~fD~Iv~NlPy~is 127 (295)
T 3gru_A 78 IEIDKSLEPYANKLKELYNNIEIIWGDA-LKVDLNKLDFNKVVANLPYQIS 127 (295)
T ss_dssp EESCGGGHHHHHHHHHHCSSEEEEESCT-TTSCGGGSCCSEEEEECCGGGH
T ss_pred EECCHHHHHHHHHHhccCCCeEEEECch-hhCCcccCCccEEEEeCccccc
Confidence 589999999999875 4578999997 5688888899999999876653
No 162
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.19 E-value=0.00013 Score=47.22 Aligned_cols=61 Identities=8% Similarity=0.035 Sum_probs=39.5
Q ss_pred CCCCHHHHHHH----Hhc----C-CCCcEEEccCCCCCCCCCCceeeeeecc---ch--hhhcccCCCCCChHHHHHHHH
Q psy4109 1 MKKNAFYTNVA----RDR----E-VEGDLVLSDLGQGVPFRAGAFDGAISIS---AL--QWLCNADKTSHNPAKRLYKFF 66 (77)
Q Consensus 1 iDiS~~ML~~A----~~r----~-~~~~~~~~D~~~~lPf~~~sFD~v~s~~---~l--~w~~d~~~~~~~p~~~l~~~~ 66 (77)
+|+|++|++.+ +++ + .+.+++++|+ +.+|+.+++ |.++... .. +|+.++ ..++
T Consensus 57 vD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~-~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~-----------~~~l 123 (218)
T 3mq2_A 57 LDADKSRMEKISAKAAAKPAKGGLPNLLYLWATA-ERLPPLSGV-GELHVLMPWGSLLRGVLGSS-----------PEML 123 (218)
T ss_dssp EESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCS-TTCCSCCCE-EEEEEESCCHHHHHHHHTSS-----------SHHH
T ss_pred EECCHHHHHHHHHHHHHhhhhcCCCceEEEecch-hhCCCCCCC-CEEEEEccchhhhhhhhccH-----------HHHH
Confidence 59999999963 221 1 2468999998 579998877 7777332 22 134332 3577
Q ss_pred HHHHHHHh
Q psy4109 67 SSLFACLW 74 (77)
Q Consensus 67 ~~l~~~L~ 74 (77)
+++++.|+
T Consensus 124 ~~~~~~Lk 131 (218)
T 3mq2_A 124 RGMAAVCR 131 (218)
T ss_dssp HHHHHTEE
T ss_pred HHHHHHcC
Confidence 77777765
No 163
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.19 E-value=5.2e-05 Score=56.67 Aligned_cols=61 Identities=13% Similarity=0.011 Sum_probs=43.2
Q ss_pred CCCCHHHHHHHHhc-----------C---CCCcEEEccCCCCCCCCC--CceeeeeeccchhhhcccCCCCCChHHHHHH
Q psy4109 1 MKKNAFYTNVARDR-----------E---VEGDLVLSDLGQGVPFRA--GAFDGAISISALQWLCNADKTSHNPAKRLYK 64 (77)
Q Consensus 1 iDiS~~ML~~A~~r-----------~---~~~~~~~~D~~~~lPf~~--~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~ 64 (77)
+|+|++|+++|+++ + ...++++||+ ..+||.+ +.||+|+++..++| ..+..
T Consensus 203 IDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~-~~lp~~d~~~~aDVVf~Nn~~F~------------pdl~~ 269 (438)
T 3uwp_A 203 VEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF-LSEEWRERIANTSVIFVNNFAFG------------PEVDH 269 (438)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCT-TSHHHHHHHHTCSEEEECCTTCC------------HHHHH
T ss_pred EeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcc-cCCccccccCCccEEEEcccccC------------chHHH
Confidence 68999999999763 1 2468999998 5688865 57999999876532 13344
Q ss_pred HHHHHHHHHh
Q psy4109 65 FFSSLFACLW 74 (77)
Q Consensus 65 ~~~~l~~~L~ 74 (77)
.|.++++.|+
T Consensus 270 aL~Ei~RvLK 279 (438)
T 3uwp_A 270 QLKERFANMK 279 (438)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHHcCC
Confidence 5566666554
No 164
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.19 E-value=8.6e-05 Score=48.36 Aligned_cols=46 Identities=7% Similarity=0.033 Sum_probs=34.7
Q ss_pred CCCCHHHHHHHHhcC-------CCCcEEEccCCCCCCC-CCCc-eeeeeeccchh
Q psy4109 1 MKKNAFYTNVARDRE-------VEGDLVLSDLGQGVPF-RAGA-FDGAISISALQ 46 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-------~~~~~~~~D~~~~lPf-~~~s-FD~v~s~~~l~ 46 (77)
+|+|++|++.|+++. .+.+++++|+.+.++. .+++ ||.|+++..++
T Consensus 82 vD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~ 136 (201)
T 2ift_A 82 LELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFH 136 (201)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCSS
T ss_pred EECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCCCC
Confidence 599999999999863 2467899997432332 4788 99999987753
No 165
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.18 E-value=0.00034 Score=46.11 Aligned_cols=41 Identities=15% Similarity=0.146 Sum_probs=33.7
Q ss_pred CCCCHHHHHHHHhc-----C-CCCcEEEccCCCCCCCCCCceeeeeec
Q psy4109 1 MKKNAFYTNVARDR-----E-VEGDLVLSDLGQGVPFRAGAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r-----~-~~~~~~~~D~~~~lPf~~~sFD~v~s~ 42 (77)
+|+|++|++.|+++ + ...+++++|+. ..|+.+++||+|++.
T Consensus 127 ~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~-~~~~~~~~~D~v~~~ 173 (258)
T 2pwy_A 127 YEARPHHLAQAERNVRAFWQVENVRFHLGKLE-EAELEEAAYDGVALD 173 (258)
T ss_dssp EESCHHHHHHHHHHHHHHCCCCCEEEEESCGG-GCCCCTTCEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHhcCCCCEEEEECchh-hcCCCCCCcCEEEEC
Confidence 58999999999887 3 34678999984 567888999999984
No 166
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.18 E-value=0.00012 Score=50.98 Aligned_cols=44 Identities=11% Similarity=0.113 Sum_probs=29.6
Q ss_pred CCCCHHHHHHHHhcC----------------CCCcEEEccCCCCC-CCCCCceeeeeeccc
Q psy4109 1 MKKNAFYTNVARDRE----------------VEGDLVLSDLGQGV-PFRAGAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----------------~~~~~~~~D~~~~l-Pf~~~sFD~v~s~~~ 44 (77)
+|+|++|++.|+++. .+.+++++|+.+.+ ++.+++||.|++...
T Consensus 136 vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 196 (336)
T 2b25_A 136 FEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDML 196 (336)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEECSS
T ss_pred EeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCCCeeEEEECCC
Confidence 589999999999863 24688999985433 577889999998753
No 167
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.18 E-value=5.7e-05 Score=49.70 Aligned_cols=45 Identities=16% Similarity=-0.008 Sum_probs=34.5
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCC--CCceeeeeeccch
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFR--AGAFDGAISISAL 45 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~--~~sFD~v~s~~~l 45 (77)
+|+|++|++.|+++. . ..+++++|+.+.+|.. +++||.|++....
T Consensus 84 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~ 136 (233)
T 2gpy_A 84 IERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAAK 136 (233)
T ss_dssp ECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGG
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECCCH
Confidence 599999999999873 2 3578889975444654 6899999998654
No 168
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.18 E-value=0.00014 Score=51.90 Aligned_cols=65 Identities=14% Similarity=0.094 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHHhcCC-----CCcEEEccCCCCC-CCCCCceeeeeeccchhhhcccCCCCCChHHHH--HHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV-----EGDLVLSDLGQGV-PFRAGAFDGAISISALQWLCNADKTSHNPAKRL--YKFFSSLFAC 72 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~-----~~~~~~~D~~~~l-Pf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l--~~~~~~l~~~ 72 (77)
+||+++|++.|+++.. ..+++++|+.+-+ .+.+++||+|++....++- ++..| ++||+.++++
T Consensus 119 VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~---------~~~~L~t~efl~~~~r~ 189 (317)
T 3gjy_A 119 VELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAI---------TPQNFTTVEFFEHCHRG 189 (317)
T ss_dssp EESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSC---------CCGGGSBHHHHHHHHHH
T ss_pred EECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCccc---------cchhhhHHHHHHHHHHh
Confidence 5899999999998853 3578999964322 2457899999998644321 11222 6788888888
Q ss_pred Hh
Q psy4109 73 LW 74 (77)
Q Consensus 73 L~ 74 (77)
|+
T Consensus 190 Lk 191 (317)
T 3gjy_A 190 LA 191 (317)
T ss_dssp EE
T ss_pred cC
Confidence 75
No 169
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.18 E-value=9.2e-05 Score=46.20 Aligned_cols=58 Identities=12% Similarity=-0.036 Sum_probs=40.2
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCC-CceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRA-GAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~-~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|++|++.|+++. ...+++++|+.+ ++.+ ++||.|++..+++++ ..+++.+++.|
T Consensus 61 ~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~D~v~~~~~~~~~--------------~~~l~~~~~~l 124 (192)
T 1l3i_A 61 IDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE--ALCKIPDIDIAVVGGSGGEL--------------QEILRIIKDKL 124 (192)
T ss_dssp EESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH--HHTTSCCEEEEEESCCTTCH--------------HHHHHHHHHTE
T ss_pred EECCHHHHHHHHHHHHHcCCCcceEEEecCHHH--hcccCCCCCEEEECCchHHH--------------HHHHHHHHHhc
Confidence 589999999998753 245788888743 3333 589999999776432 45666666655
Q ss_pred h
Q psy4109 74 W 74 (77)
Q Consensus 74 ~ 74 (77)
+
T Consensus 125 ~ 125 (192)
T 1l3i_A 125 K 125 (192)
T ss_dssp E
T ss_pred C
Confidence 3
No 170
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.17 E-value=3.4e-05 Score=48.50 Aligned_cols=46 Identities=15% Similarity=0.122 Sum_probs=35.3
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQ 46 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~ 46 (77)
+|+|++|++.|+++. ...+++++|+.+.+|..++.||.|+++..++
T Consensus 60 vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 60 VEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYA 111 (177)
T ss_dssp ECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSH
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCC
Confidence 599999999998764 1357889997443565667899999987653
No 171
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.17 E-value=0.00054 Score=45.15 Aligned_cols=59 Identities=14% Similarity=-0.049 Sum_probs=37.9
Q ss_pred CCCCHHHH----HHHHhcCCCCcEEEccCCCC---CCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYT----NVARDREVEGDLVLSDLGQG---VPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 1 iDiS~~ML----~~A~~r~~~~~~~~~D~~~~---lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+|+|++|+ +.|+++ .+..++++|+... .|+. ++||+|+++.. + + ...+.+++++++.|
T Consensus 87 vD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~~-----~-----~---~~~~~~l~~~~r~L 151 (210)
T 1nt2_A 87 VEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQDIA-----Q-----K---NQIEILKANAEFFL 151 (210)
T ss_dssp ECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEECCC-----S-----T---THHHHHHHHHHHHE
T ss_pred EECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEecc-----C-----h---hHHHHHHHHHHHHh
Confidence 59999865 444443 3567788897432 3554 89999999831 1 1 22345677888777
Q ss_pred h
Q psy4109 74 W 74 (77)
Q Consensus 74 ~ 74 (77)
+
T Consensus 152 k 152 (210)
T 1nt2_A 152 K 152 (210)
T ss_dssp E
T ss_pred C
Confidence 5
No 172
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.17 E-value=0.00023 Score=49.59 Aligned_cols=61 Identities=18% Similarity=0.098 Sum_probs=45.1
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+ ++|++.|+++. . ..+++.+|+.+.+| + .||+|++..++|++.+ ....++++++++.|+
T Consensus 213 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~-~~D~v~~~~vl~~~~~---------~~~~~~l~~~~~~L~ 279 (360)
T 1tw3_A 213 LEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP--R-KADAIILSFVLLNWPD---------HDAVRILTRCAEALE 279 (360)
T ss_dssp EEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS--S-CEEEEEEESCGGGSCH---------HHHHHHHHHHHHTEE
T ss_pred ecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC--C-CccEEEEcccccCCCH---------HHHHHHHHHHHHhcC
Confidence 477 89999998763 1 46889999855444 3 3999999999987743 344568888887765
No 173
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.13 E-value=0.00014 Score=51.84 Aligned_cols=65 Identities=23% Similarity=0.198 Sum_probs=44.4
Q ss_pred CCCCHHHHHHHHhcC---------CCCcEEEccCCCCCC-CCCCceeeeeeccchhhhcccCCCCCChHHH--HHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE---------VEGDLVLSDLGQGVP-FRAGAFDGAISISALQWLCNADKTSHNPAKR--LYKFFSS 68 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---------~~~~~~~~D~~~~lP-f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~--l~~~~~~ 68 (77)
+|+|++|++.|+++. ...+++++|+.+.++ +.+++||+|++...-.+- +... .+++|+.
T Consensus 150 VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~---------~~~~l~~~~~l~~ 220 (334)
T 1xj5_A 150 CEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIG---------PAKELFEKPFFQS 220 (334)
T ss_dssp EESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTS---------GGGGGGSHHHHHH
T ss_pred EECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccC---------cchhhhHHHHHHH
Confidence 599999999999874 235789999643233 346899999997642221 1112 2678888
Q ss_pred HHHHHh
Q psy4109 69 LFACLW 74 (77)
Q Consensus 69 l~~~L~ 74 (77)
+++.|+
T Consensus 221 ~~~~Lk 226 (334)
T 1xj5_A 221 VARALR 226 (334)
T ss_dssp HHHHEE
T ss_pred HHHhcC
Confidence 888775
No 174
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.13 E-value=0.00026 Score=49.65 Aligned_cols=60 Identities=8% Similarity=0.010 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHhh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLWS 75 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~~ 75 (77)
+|+ ++|++.|++. ...+++.+|+.+ |++ .||+|++..++|++.| ....+++++++++|+.
T Consensus 223 ~D~-~~~~~~a~~~-~~v~~~~~d~~~--~~~--~~D~v~~~~vlh~~~d---------~~~~~~l~~~~~~L~p 282 (358)
T 1zg3_A 223 FDQ-PQVVGNLTGN-ENLNFVGGDMFK--SIP--SADAVLLKWVLHDWND---------EQSLKILKNSKEAISH 282 (358)
T ss_dssp EEC-HHHHSSCCCC-SSEEEEECCTTT--CCC--CCSEEEEESCGGGSCH---------HHHHHHHHHHHHHTGG
T ss_pred ecc-HHHHhhcccC-CCcEEEeCccCC--CCC--CceEEEEcccccCCCH---------HHHHHHHHHHHHhCCC
Confidence 488 7899888753 347889999854 554 3999999999998854 3345788888888864
No 175
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.12 E-value=0.00029 Score=48.63 Aligned_cols=45 Identities=11% Similarity=0.090 Sum_probs=36.2
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWL 48 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~ 48 (77)
+|+|++|++.|+++. .+.+++++|+ ..+++. +||.|+++..++|.
T Consensus 56 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~-~~~~~~--~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 56 CELDPRLVAELHKRVQGTPVASKLQVLVGDV-LKTDLP--FFDTCVANLPYQIS 106 (285)
T ss_dssp EESCHHHHHHHHHHHTTSTTGGGEEEEESCT-TTSCCC--CCSEEEEECCGGGH
T ss_pred EECCHHHHHHHHHHHHhcCCCCceEEEEcce-ecccch--hhcEEEEecCcccc
Confidence 599999999999874 2357899997 456654 79999999887775
No 176
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.09 E-value=0.00055 Score=44.99 Aligned_cols=43 Identities=14% Similarity=0.013 Sum_probs=30.8
Q ss_pred CCCCHHHHH----HHHhcCCCCcEEEccCCCC--CCCCCCceeeeeeccc
Q psy4109 1 MKKNAFYTN----VARDREVEGDLVLSDLGQG--VPFRAGAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~----~A~~r~~~~~~~~~D~~~~--lPf~~~sFD~v~s~~~ 44 (77)
+|+|++|++ .|+++ .+.+++++|+.+. +|+.+++||.|++...
T Consensus 108 vD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~ 156 (233)
T 2ipx_A 108 VEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADVA 156 (233)
T ss_dssp ECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECCC
T ss_pred EECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcCC
Confidence 599977554 44444 4578899998542 5667889999999654
No 177
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.09 E-value=0.0004 Score=47.52 Aligned_cols=63 Identities=11% Similarity=0.013 Sum_probs=42.6
Q ss_pred CCC-CHHHHHHHHhcC---------------CCCcEEEccCCCCCC-C----CCCceeeeeeccchhhhcccCCCCCChH
Q psy4109 1 MKK-NAFYTNVARDRE---------------VEGDLVLSDLGQGVP-F----RAGAFDGAISISALQWLCNADKTSHNPA 59 (77)
Q Consensus 1 iDi-S~~ML~~A~~r~---------------~~~~~~~~D~~~~lP-f----~~~sFD~v~s~~~l~w~~d~~~~~~~p~ 59 (77)
+|+ |++|++.|+++. ...++...|.++... + .+++||.|+++.++++..+
T Consensus 108 ~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~--------- 178 (281)
T 3bzb_A 108 TDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQA--------- 178 (281)
T ss_dssp EECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGG---------
T ss_pred EeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHH---------
Confidence 589 899999998764 134556555543211 2 4688999999888876533
Q ss_pred HHHHHHHHHHHHHHh
Q psy4109 60 KRLYKFFSSLFACLW 74 (77)
Q Consensus 60 ~~l~~~~~~l~~~L~ 74 (77)
+..+++.+++.|+
T Consensus 179 --~~~ll~~l~~~Lk 191 (281)
T 3bzb_A 179 --HDALLRSVKMLLA 191 (281)
T ss_dssp --HHHHHHHHHHHBC
T ss_pred --HHHHHHHHHHHhc
Confidence 4567777777765
No 178
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.07 E-value=0.00052 Score=45.39 Aligned_cols=41 Identities=12% Similarity=0.077 Sum_probs=32.9
Q ss_pred CCCCHHHHHHHHhcC-----CC-CcEEEccCCCCCCCCCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE-----VE-GDLVLSDLGQGVPFRAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~-~~~~~~D~~~~lPf~~~sFD~v~s~~ 43 (77)
+|+|++|++.|+++. .+ .+++++|+.+ ++.+++||+|++..
T Consensus 124 ~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~D~v~~~~ 170 (255)
T 3mb5_A 124 YEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE--GIEEENVDHVILDL 170 (255)
T ss_dssp ECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG--CCCCCSEEEEEECS
T ss_pred EecCHHHHHHHHHHHHHcCCCCceEEEECchhh--ccCCCCcCEEEECC
Confidence 599999999999873 23 6889999853 46788999999853
No 179
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.06 E-value=0.0005 Score=47.02 Aligned_cols=42 Identities=12% Similarity=0.011 Sum_probs=32.9
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeeccc
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~ 44 (77)
+|+|++|++.|+++. . ..+++++|+. .++. +++||.|+++..
T Consensus 154 vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~-~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 154 IEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR-DFPG-ENIADRILMGYV 201 (278)
T ss_dssp ECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT-TCCC-CSCEEEEEECCC
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEEECCHH-Hhcc-cCCccEEEECCc
Confidence 599999999998763 2 2568999984 5655 889999999643
No 180
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.04 E-value=0.00018 Score=46.92 Aligned_cols=47 Identities=13% Similarity=0.063 Sum_probs=37.0
Q ss_pred CCCCHHHHHHHHhcC----------CCCcEEEccCCCCCC----CCCCceeeeeeccchhhh
Q psy4109 1 MKKNAFYTNVARDRE----------VEGDLVLSDLGQGVP----FRAGAFDGAISISALQWL 48 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----------~~~~~~~~D~~~~lP----f~~~sFD~v~s~~~l~w~ 48 (77)
+|+|++|++.|+++. .+.+++++|+. ..+ +.+++||.|++..+++++
T Consensus 115 vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~~fD~I~~~~~~~~~ 175 (227)
T 2pbf_A 115 LERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIY-QVNEEEKKELGLFDAIHVGASASEL 175 (227)
T ss_dssp EESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGG-GCCHHHHHHHCCEEEEEECSBBSSC
T ss_pred EeCCHHHHHHHHHHHHHcCccccccCCEEEEECChH-hcccccCccCCCcCEEEECCchHHH
Confidence 589999999998873 24678999974 344 567889999999888654
No 181
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.03 E-value=0.00059 Score=46.72 Aligned_cols=61 Identities=10% Similarity=-0.189 Sum_probs=42.7
Q ss_pred CCCCHHHHHHHHhcC---CCCcEEEccCCC--CCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE---VEGDLVLSDLGQ--GVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---~~~~~~~~D~~~--~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.++++. .+...+.+|... ..|+..+++|+|++....+|- -..++.++++.|+
T Consensus 108 vD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~~~-------------~~~~l~~~~r~LK 173 (233)
T 4df3_A 108 VEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVAQPEQ-------------AAIVVRNARFFLR 173 (233)
T ss_dssp EECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECCCCTTH-------------HHHHHHHHHHHEE
T ss_pred EeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEeccCChh-------------HHHHHHHHHHhcc
Confidence 599999999998775 345678888753 346788999999986543321 1346677776664
No 182
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.01 E-value=0.00027 Score=46.31 Aligned_cols=46 Identities=9% Similarity=-0.026 Sum_probs=36.4
Q ss_pred CCCCHHHHHHHHhcC----------CCCcEEEccCCCCCCCCC-Cceeeeeeccchhhh
Q psy4109 1 MKKNAFYTNVARDRE----------VEGDLVLSDLGQGVPFRA-GAFDGAISISALQWL 48 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----------~~~~~~~~D~~~~lPf~~-~sFD~v~s~~~l~w~ 48 (77)
+|+|++|++.|+++. .+.+++++|..+ ++.+ ++||.|++..+++++
T Consensus 120 vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~fD~I~~~~~~~~~ 176 (227)
T 1r18_A 120 IEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK--GYPPNAPYNAIHVGAAAPDT 176 (227)
T ss_dssp EESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG--CCGGGCSEEEEEECSCBSSC
T ss_pred EEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc--CCCcCCCccEEEECCchHHH
Confidence 589999999998763 246789999754 4444 889999999988765
No 183
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=96.98 E-value=0.00016 Score=48.53 Aligned_cols=43 Identities=23% Similarity=0.122 Sum_probs=32.5
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCC--Cceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRA--GAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~--~sFD~v~s~~ 43 (77)
+|+|++|++.|+++. . ..+++++|+.+.+|..+ ++||.|++..
T Consensus 94 vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~ 144 (248)
T 3tfw_A 94 LEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDA 144 (248)
T ss_dssp EECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEECS
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECC
Confidence 599999999999873 1 35789999754355443 4999999865
No 184
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=96.95 E-value=0.0013 Score=47.69 Aligned_cols=66 Identities=12% Similarity=0.011 Sum_probs=47.3
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++. . ..+++++|+ ..++.. ++||.|+++.=+. ..-...+.+..+++.+.+.|+
T Consensus 262 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~-~~l~~~-~~fD~Iv~NPPYG-------~rl~~~~~l~~ly~~lg~~lk 332 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLEDVVKLKQMRL-QDFKTN-KINGVLISNPPYG-------ERLLDDKAVDILYNEMGETFA 332 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCG-GGCCCC-CCSCEEEECCCCT-------TTTSCHHHHHHHHHHHHHHHT
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECCh-HHCCcc-CCcCEEEECCchh-------hccCCHHHHHHHHHHHHHHHh
Confidence 599999999999874 2 257899998 457754 5899999995331 111234677788888888776
Q ss_pred h
Q psy4109 75 S 75 (77)
Q Consensus 75 ~ 75 (77)
.
T Consensus 333 ~ 333 (384)
T 3ldg_A 333 P 333 (384)
T ss_dssp T
T ss_pred h
Confidence 4
No 185
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.94 E-value=0.00063 Score=45.15 Aligned_cols=48 Identities=8% Similarity=-0.029 Sum_probs=34.3
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCC-C-CCC---CCceeeeeeccchhhh
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQG-V-PFR---AGAFDGAISISALQWL 48 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~-l-Pf~---~~sFD~v~s~~~l~w~ 48 (77)
+|+|++|++.|+++. . ..+++++|+.+. + ++. +++||.|+|+..+++.
T Consensus 95 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~ 153 (254)
T 2h00_A 95 TEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFAN 153 (254)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC--
T ss_pred EECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccC
Confidence 599999999999774 1 257899996431 1 444 3789999999776654
No 186
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=96.92 E-value=0.00094 Score=43.50 Aligned_cols=61 Identities=8% Similarity=-0.162 Sum_probs=39.9
Q ss_pred CCCCHHHHHHHHhcC---CCCcEEEccCCCCC--CCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE---VEGDLVLSDLGQGV--PFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---~~~~~~~~D~~~~l--Pf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++|++.++++. .+.+++++|+.+.. +..+++||.|++.... +...+.++.++++.|+
T Consensus 104 vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~~-------------~~~~~~~l~~~~~~Lk 169 (227)
T 1g8a_A 104 IEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVAQ-------------PTQAKILIDNAEVYLK 169 (227)
T ss_dssp EESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCCS-------------TTHHHHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCCC-------------HhHHHHHHHHHHHhcC
Confidence 589999999887654 35688999985421 2235689999987541 1122345777777664
No 187
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=96.91 E-value=0.0012 Score=47.89 Aligned_cols=66 Identities=3% Similarity=0.008 Sum_probs=45.9
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++. . ..+++++|+ ..+|.. ++||+|+++.=+. ..-...+.+..++..|.+.|+
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~-~~~~~~-~~fD~Iv~NPPYg-------~rl~~~~~l~~ly~~lg~~lk 339 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQV-ADFQTE-DEYGVVVANPPYG-------ERLEDEEAVRQLYREMGIVYK 339 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCG-GGCCCC-CCSCEEEECCCCC-------CSHHHHHHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECCh-HhCCCC-CCCCEEEECCCCc-------cccCCchhHHHHHHHHHHHHh
Confidence 599999999999874 2 267999998 457754 5899999995321 001123567777777777776
Q ss_pred h
Q psy4109 75 S 75 (77)
Q Consensus 75 ~ 75 (77)
.
T Consensus 340 ~ 340 (393)
T 3k0b_A 340 R 340 (393)
T ss_dssp T
T ss_pred c
Confidence 4
No 188
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.87 E-value=0.00054 Score=44.56 Aligned_cols=47 Identities=11% Similarity=-0.060 Sum_probs=36.2
Q ss_pred CCCCHHHHHHHHhcC----------CCCcEEEccCCCCCCCCCCceeeeeeccchhhh
Q psy4109 1 MKKNAFYTNVARDRE----------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWL 48 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~ 48 (77)
+|+|+.|++.|+++. .+.+++++|+. ..+..+++||.|++..+++.+
T Consensus 108 vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~i~~~~~~~~~ 164 (226)
T 1i1n_A 108 IDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR-MGYAEEAPYDAIHVGAAAPVV 164 (226)
T ss_dssp EESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG-GCCGGGCCEEEEEECSBBSSC
T ss_pred EeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcc-cCcccCCCcCEEEECCchHHH
Confidence 589999999998763 14578999974 455567889999999877543
No 189
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=96.86 E-value=0.0006 Score=47.37 Aligned_cols=45 Identities=11% Similarity=0.046 Sum_probs=32.3
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccchhhh
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWL 48 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~ 48 (77)
+|+|++|++.|+++. .+.+++++|+ ..+|+ ++||.|+++...+|.
T Consensus 70 vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~-~~~~~--~~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 70 IDIDSRMISEVKKRCLYEGYNNLEVYEGDA-IKTVF--PKFDVCTANIPYKIS 119 (299)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCCEEC----C-CSSCC--CCCSEEEEECCGGGH
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEECch-hhCCc--ccCCEEEEcCCcccc
Confidence 599999999998763 2467899997 45665 489999999887765
No 190
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=96.85 E-value=0.0006 Score=43.58 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=32.0
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~ 43 (77)
+|+|++|++.|+++. .+.+++++|+. .++ .+++||.|+++.
T Consensus 95 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~-~~~~~D~i~~~~ 140 (207)
T 1jsx_A 95 LDSLGKRVRFLRQVQHELKLENIEPVQSRVE-EFP-SEPPFDGVISRA 140 (207)
T ss_dssp EESCHHHHHHHHHHHHHTTCSSEEEEECCTT-TSC-CCSCEEEEECSC
T ss_pred EeCCHHHHHHHHHHHHHcCCCCeEEEecchh-hCC-ccCCcCEEEEec
Confidence 589999999998763 23678999974 454 568899999874
No 191
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=96.84 E-value=0.00027 Score=47.70 Aligned_cols=58 Identities=12% Similarity=0.071 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++. ...+++++|+.+ ++.+++||.|+++...++ +..++..+++.|+
T Consensus 148 vDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~--~~~~~~fD~Vv~n~~~~~--------------~~~~l~~~~~~Lk 209 (254)
T 2nxc_A 148 VDIDPMVLPQAEANAKRNGVRPRFLEGSLEA--ALPFGPFDLLVANLYAEL--------------HAALAPRYREALV 209 (254)
T ss_dssp EESCGGGHHHHHHHHHHTTCCCEEEESCHHH--HGGGCCEEEEEEECCHHH--------------HHHHHHHHHHHEE
T ss_pred EECCHHHHHHHHHHHHHcCCcEEEEECChhh--cCcCCCCCEEEECCcHHH--------------HHHHHHHHHHHcC
Confidence 599999999998863 226788888743 355789999999865543 4567777777664
No 192
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=96.81 E-value=0.0011 Score=46.29 Aligned_cols=41 Identities=12% Similarity=-0.099 Sum_probs=32.8
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeec
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~ 42 (77)
+|+|+.|++.|+++. .+.+++++|+ ..++..+++||.|++.
T Consensus 149 vD~s~~~l~~a~~~~~~~g~~~v~~~~~D~-~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 149 FDVDENRLRETRLNLSRLGVLNVILFHSSS-LHIGELNVEFDKILLD 194 (315)
T ss_dssp ECSCHHHHHHHHHHHHHHTCCSEEEESSCG-GGGGGGCCCEEEEEEE
T ss_pred EcCCHHHHHHHHHHHHHhCCCeEEEEECCh-hhcccccccCCEEEEe
Confidence 599999999998873 2468899997 4566567889999984
No 193
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=96.79 E-value=0.00024 Score=46.45 Aligned_cols=48 Identities=8% Similarity=-0.017 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCC-----Cceeeeeeccchhhh
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRA-----GAFDGAISISALQWL 48 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~-----~sFD~v~s~~~l~w~ 48 (77)
+|+|++|++.|+++. . ..+++++|+.+.+|..+ ++||.|++....++.
T Consensus 89 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~ 147 (221)
T 3u81_A 89 MEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRY 147 (221)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGH
T ss_pred EeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccc
Confidence 599999999999863 1 36889999744455433 799999998766554
No 194
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.77 E-value=0.00017 Score=46.83 Aligned_cols=60 Identities=12% Similarity=-0.005 Sum_probs=40.6
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCC-----CceeeeeeccchhhhcccCCCCCChHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRA-----GAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSL 69 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~-----~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l 69 (77)
+|+|++|++.|+++. . ..+++++|+.+.+|..+ ++||.|++... ......+|+.+
T Consensus 95 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~--------------~~~~~~~l~~~ 160 (225)
T 3tr6_A 95 CDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDAD--------------KANTDLYYEES 160 (225)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECSC--------------GGGHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECCC--------------HHHHHHHHHHH
Confidence 599999999998774 1 25789999744444322 89999996642 12234567777
Q ss_pred HHHHh
Q psy4109 70 FACLW 74 (77)
Q Consensus 70 ~~~L~ 74 (77)
++.|+
T Consensus 161 ~~~L~ 165 (225)
T 3tr6_A 161 LKLLR 165 (225)
T ss_dssp HHHEE
T ss_pred HHhcC
Confidence 76664
No 195
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.76 E-value=0.00022 Score=44.70 Aligned_cols=46 Identities=13% Similarity=0.024 Sum_probs=34.6
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCC---CCCCCceeeeeeccchh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGV---PFRAGAFDGAISISALQ 46 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~l---Pf~~~sFD~v~s~~~l~ 46 (77)
+|+|++|++.|+++. ...+++++|+.+.+ |+.+++||.|+++..++
T Consensus 73 vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~ 127 (187)
T 2fhp_A 73 IEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYA 127 (187)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGG
T ss_pred EECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCC
Confidence 599999999998774 23678999974322 23478999999997754
No 196
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=96.76 E-value=0.0005 Score=45.32 Aligned_cols=47 Identities=13% Similarity=0.119 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCC-ceeeeeeccchhhhc
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAG-AFDGAISISALQWLC 49 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~-sFD~v~s~~~l~w~~ 49 (77)
+|+|++|++.|+++. .+.+++.+|. ..++.++ .||.|++..+++++.
T Consensus 120 vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~--~~~~~~~~~fD~Ii~~~~~~~~~ 172 (235)
T 1jg1_A 120 IERIPELVEFAKRNLERAGVKNVHVILGDG--SKGFPPKAPYDVIIVTAGAPKIP 172 (235)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEESCG--GGCCGGGCCEEEEEECSBBSSCC
T ss_pred EeCCHHHHHHHHHHHHHcCCCCcEEEECCc--ccCCCCCCCccEEEECCcHHHHH
Confidence 589999999999874 2357888996 2455554 499999999887763
No 197
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.75 E-value=0.00044 Score=47.74 Aligned_cols=69 Identities=17% Similarity=0.263 Sum_probs=43.6
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCce---eeeeeccchhhhcc---cCCCCCChHHHHH-----
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAF---DGAISISALQWLCN---ADKTSHNPAKRLY----- 63 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sF---D~v~s~~~l~w~~d---~~~~~~~p~~~l~----- 63 (77)
+|+|++|++.|+++. . ..+++++|+.+ ++. ++| |.|+|+.-.....+ ++-. +.|...|.
T Consensus 152 vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~--~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dg 227 (284)
T 1nv8_A 152 TDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE--PFK-EKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDG 227 (284)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG--GGG-GGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTS
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECcchh--hcc-cccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcH
Confidence 599999999999873 2 26889999854 332 579 99999842221111 1112 55655553
Q ss_pred -HHHHHHH-HHH
Q psy4109 64 -KFFSSLF-ACL 73 (77)
Q Consensus 64 -~~~~~l~-~~L 73 (77)
.++.++. +.|
T Consensus 228 l~~~~~i~~~~l 239 (284)
T 1nv8_A 228 LDFYREFFGRYD 239 (284)
T ss_dssp CHHHHHHHHHCC
T ss_pred HHHHHHHHHhcC
Confidence 5666666 544
No 198
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=96.75 E-value=0.00042 Score=48.90 Aligned_cols=46 Identities=13% Similarity=-0.013 Sum_probs=34.6
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhc
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLC 49 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~ 49 (77)
+|+|+ |++.|+++. ...+++++|+ +.+++. ++||.|+|..+++++.
T Consensus 79 vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~-~~~~~~-~~~D~Ivs~~~~~~~~ 130 (348)
T 2y1w_A 79 VEAST-MAQHAEVLVKSNNLTDRIVVIPGKV-EEVSLP-EQVDIIISEPMGYMLF 130 (348)
T ss_dssp EECST-HHHHHHHHHHHTTCTTTEEEEESCT-TTCCCS-SCEEEEEECCCBTTBT
T ss_pred ECCHH-HHHHHHHHHHHcCCCCcEEEEEcch-hhCCCC-CceeEEEEeCchhcCC
Confidence 58895 999988762 2368899998 557654 6799999998766553
No 199
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=96.74 E-value=0.0018 Score=42.36 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=31.6
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeec
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~ 42 (77)
+|+|++|++.|+++. ...+++.+|+.+ ..+.+++||+|++.
T Consensus 119 vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~ 165 (248)
T 2yvl_A 119 FEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKD-AEVPEGIFHAAFVD 165 (248)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTT-SCCCTTCBSEEEEC
T ss_pred EecCHHHHHHHHHHHHHcCCCCcEEEEEcChhh-cccCCCcccEEEEC
Confidence 599999999999874 245788899754 33367789999985
No 200
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=96.69 E-value=0.00014 Score=48.75 Aligned_cols=44 Identities=9% Similarity=-0.096 Sum_probs=32.9
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCC--CCCCC-Cceeeeeeccc
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQG--VPFRA-GAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~--lPf~~-~sFD~v~s~~~ 44 (77)
+|+|++|++.|+....+.+++++|+.+. +|+.+ ++||.|++..+
T Consensus 115 vD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 115 IDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA 161 (236)
T ss_dssp EESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS
T ss_pred EeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc
Confidence 5899999999985444578999997532 46544 47999998654
No 201
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.68 E-value=0.007 Score=44.23 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=26.2
Q ss_pred cEEEccCCC--CCCCCCCceeeeeeccchhhhccc
Q psy4109 19 DLVLSDLGQ--GVPFRAGAFDGAISISALQWLCNA 51 (77)
Q Consensus 19 ~~~~~D~~~--~lPf~~~sFD~v~s~~~l~w~~d~ 51 (77)
-++.|..+. .-.|++++||.|+|+++|||+.+.
T Consensus 131 ~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~ 165 (384)
T 2efj_A 131 CLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQV 165 (384)
T ss_dssp EEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSS
T ss_pred eEEEecchhhhhccCCCCceEEEEecceeeecCCC
Confidence 466666543 356889999999999999999774
No 202
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.66 E-value=0.00021 Score=46.20 Aligned_cols=42 Identities=12% Similarity=-0.105 Sum_probs=32.1
Q ss_pred CCCCHHHHHHHHhcCC------CCcEEEccCCCCCCCCCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDREV------EGDLVLSDLGQGVPFRAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~------~~~~~~~D~~~~lPf~~~sFD~v~s~~ 43 (77)
+|+|++|++.|+++.. ..+++++|+.+.+|..++ ||.|++..
T Consensus 87 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 87 IDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp EESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred EECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 5899999999987631 357899997444566667 99999873
No 203
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=96.63 E-value=0.0019 Score=46.55 Aligned_cols=66 Identities=11% Similarity=0.069 Sum_probs=46.8
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|+.|++.|+++. . ..++.++|+. .++. +++||+|+++.-+. . --...+.+..+|+.+.+.|+
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~-~l~~-~~~~D~Iv~NPPyg--~-----rl~~~~~l~~ly~~lg~~lk 333 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDAT-QFKS-EDEFGFIITNPPYG--E-----RLEDKDSVKQLYKELGYAFR 333 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGG-GCCC-SCBSCEEEECCCCC--C-----SHHHHHHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChh-hcCc-CCCCcEEEECCCCc--C-----ccCCHHHHHHHHHHHHHHHh
Confidence 599999999999874 2 3578999984 5665 46899999986431 0 01123567778888777776
Q ss_pred h
Q psy4109 75 S 75 (77)
Q Consensus 75 ~ 75 (77)
.
T Consensus 334 ~ 334 (385)
T 3ldu_A 334 K 334 (385)
T ss_dssp T
T ss_pred h
Confidence 4
No 204
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.60 E-value=0.0005 Score=46.58 Aligned_cols=43 Identities=5% Similarity=-0.018 Sum_probs=33.9
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCC---CCceeeeeeccc
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFR---AGAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~---~~sFD~v~s~~~ 44 (77)
+|+|++|++.|+++. .+.+++++|+ +.++.. +++||+|+|..+
T Consensus 110 vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~-~~~~~~~~~~~~fD~I~s~a~ 160 (249)
T 3g89_A 110 VDATRKKVAFVERAIEVLGLKGARALWGRA-EVLAREAGHREAYARAVARAV 160 (249)
T ss_dssp EESCHHHHHHHHHHHHHHTCSSEEEEECCH-HHHTTSTTTTTCEEEEEEESS
T ss_pred EECCHHHHHHHHHHHHHhCCCceEEEECcH-HHhhcccccCCCceEEEECCc
Confidence 599999999998763 2468899997 556653 589999999754
No 205
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.59 E-value=8.7e-05 Score=45.85 Aligned_cols=46 Identities=11% Similarity=0.070 Sum_probs=34.3
Q ss_pred CCCCHHHHHHHHhcCC----CCcEEEccCCCCCCCC---CCceeeeeeccchh
Q psy4109 1 MKKNAFYTNVARDREV----EGDLVLSDLGQGVPFR---AGAFDGAISISALQ 46 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~----~~~~~~~D~~~~lPf~---~~sFD~v~s~~~l~ 46 (77)
+|+|++|++.|+++.. +.+++++|+.+.+|.. +++||.|+++..++
T Consensus 69 vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~ 121 (171)
T 1ws6_A 69 VEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA 121 (171)
T ss_dssp ECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT
T ss_pred EeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCCc
Confidence 5999999999998642 5688999974323321 34899999998765
No 206
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.58 E-value=0.0016 Score=47.36 Aligned_cols=23 Identities=30% Similarity=0.346 Sum_probs=19.9
Q ss_pred CCCCCCceeeeeeccchhhhccc
Q psy4109 29 VPFRAGAFDGAISISALQWLCNA 51 (77)
Q Consensus 29 lPf~~~sFD~v~s~~~l~w~~d~ 51 (77)
-.|++++||.|+|+++|||+.+.
T Consensus 144 rlfP~~S~d~v~Ss~aLHWls~~ 166 (374)
T 3b5i_A 144 RLFPARTIDFFHSAFSLHWLSQV 166 (374)
T ss_dssp CCSCTTCEEEEEEESCTTBCSSC
T ss_pred ccCCCcceEEEEecceeeeeccC
Confidence 34789999999999999999753
No 207
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=96.58 E-value=0.00035 Score=44.51 Aligned_cols=57 Identities=11% Similarity=0.048 Sum_probs=34.3
Q ss_pred CCcEEEccCCCCCC-------------------------CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHH
Q psy4109 17 EGDLVLSDLGQGVP-------------------------FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFA 71 (77)
Q Consensus 17 ~~~~~~~D~~~~lP-------------------------f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~ 71 (77)
+.+++++|+. .++ +.+++||.|+|+++++|............+.+...++.+++
T Consensus 64 ~v~~~~~d~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~ 142 (201)
T 2plw_A 64 NVYFIQGEIG-KDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQ 142 (201)
T ss_dssp TCEEEECCTT-TTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEcccc-chhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHH
Confidence 4678899974 565 57789999999998887411000000001223456777777
Q ss_pred HHh
Q psy4109 72 CLW 74 (77)
Q Consensus 72 ~L~ 74 (77)
.|+
T Consensus 143 ~Lk 145 (201)
T 2plw_A 143 YIN 145 (201)
T ss_dssp HEE
T ss_pred Hcc
Confidence 664
No 208
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.57 E-value=0.0001 Score=51.16 Aligned_cols=65 Identities=9% Similarity=-0.004 Sum_probs=39.0
Q ss_pred CCCCHHHHHHHHhcC-C------CCcEE--EccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE-V------EGDLV--LSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFA 71 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-~------~~~~~--~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~ 71 (77)
+|+|+ |+..|+++. . +..++ ++|+ ..+| +++||+|+|..+ ++..++. ....+.++ .+..+++
T Consensus 109 VD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~-~~l~--~~~fD~Vvsd~~-~~~~~~~---~d~~~~l~-~L~~~~r 179 (276)
T 2wa2_A 109 VKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDV-TKME--PFQADTVLCDIG-ESNPTAA---VEASRTLT-VLNVISR 179 (276)
T ss_dssp EEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCG-GGCC--CCCCSEEEECCC-CCCSCHH---HHHHHHHH-HHHHHHH
T ss_pred EECch-hhhhhhhchhhhhhcCCCeEEEeccCcH-hhCC--CCCcCEEEECCC-cCCCchh---hhHHHHHH-HHHHHHH
Confidence 58888 765554432 1 35778 8998 4566 789999999876 4432210 00111122 6777777
Q ss_pred HHh
Q psy4109 72 CLW 74 (77)
Q Consensus 72 ~L~ 74 (77)
+|+
T Consensus 180 ~Lk 182 (276)
T 2wa2_A 180 WLE 182 (276)
T ss_dssp HHH
T ss_pred Hhc
Confidence 775
No 209
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.57 E-value=0.0012 Score=49.02 Aligned_cols=45 Identities=13% Similarity=-0.008 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeeccchhhh
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWL 48 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~ 48 (77)
+|+|+ |++.|+++. ...+++++|+ ..+++. +.||+|+|+.+++++
T Consensus 187 vD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~-~~~~~~-~~fD~Ivs~~~~~~~ 237 (480)
T 3b3j_A 187 VEAST-MAQHAEVLVKSNNLTDRIVVIPGKV-EEVSLP-EQVDIIISEPMGYML 237 (480)
T ss_dssp EECHH-HHHHHHHHHHHTTCTTTEEEEESCT-TTCCCS-SCEEEEECCCCHHHH
T ss_pred EEcHH-HHHHHHHHHHHcCCCCcEEEEECch-hhCccC-CCeEEEEEeCchHhc
Confidence 58998 999998762 2368999998 456654 689999999876555
No 210
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.45 E-value=0.0008 Score=44.43 Aligned_cols=60 Identities=17% Similarity=0.102 Sum_probs=39.8
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCC--------------CCC--CceeeeeeccchhhhcccCCCCCCh
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVP--------------FRA--GAFDGAISISALQWLCNADKTSHNP 58 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lP--------------f~~--~sFD~v~s~~~l~w~~d~~~~~~~p 58 (77)
+|+|++|++.|+++. . ..+++++|+.+.+| |.+ ++||+|++.....
T Consensus 91 vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~------------ 158 (239)
T 2hnk_A 91 CDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKE------------ 158 (239)
T ss_dssp EESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGG------------
T ss_pred EECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHH------------
Confidence 589999999999873 1 25788888643233 233 8899999885321
Q ss_pred HHHHHHHHHHHHHHHh
Q psy4109 59 AKRLYKFFSSLFACLW 74 (77)
Q Consensus 59 ~~~l~~~~~~l~~~L~ 74 (77)
.+..+|+.+++.|+
T Consensus 159 --~~~~~l~~~~~~L~ 172 (239)
T 2hnk_A 159 --NYPNYYPLILKLLK 172 (239)
T ss_dssp --GHHHHHHHHHHHEE
T ss_pred --HHHHHHHHHHHHcC
Confidence 22356666666654
No 211
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=96.44 E-value=0.0022 Score=43.35 Aligned_cols=40 Identities=15% Similarity=0.084 Sum_probs=32.3
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeec
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~ 42 (77)
+|+|++|++.|+++. .+.+++++|+.+ ++.+++||.|++.
T Consensus 141 vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~--~~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 141 VERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD--FISDQMYDAVIAD 186 (275)
T ss_dssp ECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT--CCCSCCEEEEEEC
T ss_pred EECCHHHHHHHHHHHHhcCCCCcEEEEECchhc--cCcCCCccEEEEc
Confidence 599999999998773 246789999854 6678899999983
No 212
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=96.42 E-value=0.0017 Score=47.27 Aligned_cols=42 Identities=10% Similarity=0.158 Sum_probs=33.4
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCC---CCCCCCceeeeeec
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQG---VPFRAGAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~---lPf~~~sFD~v~s~ 42 (77)
+|+|++|++.|+++. .+.+++++|+.+. +|+.+++||.|+++
T Consensus 314 vD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 314 VEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred EeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 599999999998764 2468999998543 45677899999985
No 213
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.41 E-value=0.0021 Score=43.32 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=31.7
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeec
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~ 42 (77)
+|+|++|++.|+++. .+.+++++|+.+ . +.+++||+|++.
T Consensus 143 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~~~~~~D~V~~~ 188 (277)
T 1o54_A 143 YEKREEFAKLAESNLTKWGLIERVTIKVRDISE-G-FDEKDVDALFLD 188 (277)
T ss_dssp ECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGG-C-CSCCSEEEEEEC
T ss_pred EECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH-c-ccCCccCEEEEC
Confidence 599999999999873 245788899754 3 667899999985
No 214
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.36 E-value=0.0013 Score=44.94 Aligned_cols=42 Identities=17% Similarity=0.029 Sum_probs=33.1
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCCCceeeeeeccc
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRAGAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~ 44 (77)
+|+|++|++.|+++. .+..++++|+.+ +|. +++||.|++...
T Consensus 149 vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~-~~~-~~~~D~Vi~d~p 195 (272)
T 3a27_A 149 IEKNPTAYHYLCENIKLNKLNNVIPILADNRD-VEL-KDVADRVIMGYV 195 (272)
T ss_dssp EECCHHHHHHHHHHHHHTTCSSEEEEESCGGG-CCC-TTCEEEEEECCC
T ss_pred EeCCHHHHHHHHHHHHHcCCCCEEEEECChHH-cCc-cCCceEEEECCc
Confidence 589999999998763 245789999854 465 778999998864
No 215
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=96.31 E-value=0.0017 Score=45.35 Aligned_cols=44 Identities=14% Similarity=0.064 Sum_probs=34.3
Q ss_pred CcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 18 GDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 18 ~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
.+++.+|+.+++| +||+|++..++|++.| ....+++++++++|+
T Consensus 234 v~~~~~d~~~~~p----~~D~v~~~~vlh~~~d---------~~~~~~L~~~~~~Lk 277 (348)
T 3lst_A 234 WKVVEGDFLREVP----HADVHVLKRILHNWGD---------EDSVRILTNCRRVMP 277 (348)
T ss_dssp EEEEECCTTTCCC----CCSEEEEESCGGGSCH---------HHHHHHHHHHHHTCC
T ss_pred eEEEecCCCCCCC----CCcEEEEehhccCCCH---------HHHHHHHHHHHHhcC
Confidence 5889999854444 8999999999998754 345678888888875
No 216
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.31 E-value=0.00031 Score=45.64 Aligned_cols=44 Identities=9% Similarity=0.009 Sum_probs=31.7
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCC-C---CCceeeeeeccc
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPF-R---AGAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf-~---~~sFD~v~s~~~ 44 (77)
+|+|++|++.|+++. . ..+++++|+.+.+|. . .++||.|++...
T Consensus 89 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~ 142 (223)
T 3duw_A 89 LEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIFIDAD 142 (223)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSC
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCC
Confidence 589999999998763 1 257899997443332 1 267999998754
No 217
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.29 E-value=0.00025 Score=48.88 Aligned_cols=65 Identities=6% Similarity=-0.048 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHhcC-C------CCcEE--EccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE-V------EGDLV--LSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFA 71 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-~------~~~~~--~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~ 71 (77)
+|+|+ |+..|+++. . +..++ ++|+ ..+| +++||+|+|..+ ++..++. -...+.++ .+..+++
T Consensus 101 vD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~-~~l~--~~~fD~V~sd~~-~~~~~~~---~d~~~~l~-~L~~~~r 171 (265)
T 2oxt_A 101 VRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDI-HTLP--VERTDVIMCDVG-ESSPKWS---VESERTIK-ILELLEK 171 (265)
T ss_dssp EEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCT-TTSC--CCCCSEEEECCC-CCCSCHH---HHHHHHHH-HHHHHHH
T ss_pred EECch-hhhhhhhhhhhhhccCCCeEEEecccCH-hHCC--CCCCcEEEEeCc-ccCCccc---hhHHHHHH-HHHHHHH
Confidence 57887 754443332 1 35778 8998 4566 789999999876 4432210 00111122 6777777
Q ss_pred HHh
Q psy4109 72 CLW 74 (77)
Q Consensus 72 ~L~ 74 (77)
+|+
T Consensus 172 ~Lk 174 (265)
T 2oxt_A 172 WKV 174 (265)
T ss_dssp HHH
T ss_pred Hhc
Confidence 775
No 218
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.25 E-value=0.0015 Score=50.66 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=47.9
Q ss_pred CCCCHHHHHHHHhcC----C---CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccC--CCCCChHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE----V---EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNAD--KTSHNPAKRLYKFFSSLFA 71 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~---~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~--~~~~~p~~~l~~~~~~l~~ 71 (77)
+|+|+.|++.|+++. . ..+++++|+.+.++..+++||.|++..-. +.... .......+..++++..+++
T Consensus 568 VD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~--f~~~~~~~~~~~~~~~~~~ll~~a~~ 645 (703)
T 3v97_A 568 VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT--FSNSKRMEDAFDVQRDHLALMKDLKR 645 (703)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCS--BC-------CCBHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCcc--ccCCccchhHHHHHHHHHHHHHHHHH
Confidence 599999999999873 2 35789999754466667899999987521 11100 0123445677778887777
Q ss_pred HHh
Q psy4109 72 CLW 74 (77)
Q Consensus 72 ~L~ 74 (77)
.|+
T Consensus 646 ~Lk 648 (703)
T 3v97_A 646 LLR 648 (703)
T ss_dssp HEE
T ss_pred hcC
Confidence 764
No 219
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.24 E-value=0.00042 Score=46.74 Aligned_cols=43 Identities=14% Similarity=-0.070 Sum_probs=32.2
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCC------CCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFR------AGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~------~~sFD~v~s~~ 43 (77)
+|+|++|++.|+++. . ..+++++|+.+.+|.. +++||.|++..
T Consensus 110 iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~ 164 (247)
T 1sui_A 110 MDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDA 164 (247)
T ss_dssp EESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECS
T ss_pred EECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcC
Confidence 589999999999763 1 3578999974444532 68999999864
No 220
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=96.16 E-value=0.0018 Score=44.37 Aligned_cols=39 Identities=5% Similarity=-0.193 Sum_probs=30.1
Q ss_pred CCCCHHHHHHHHhcCC---------CCcEEEccCCCCCCCCCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDREV---------EGDLVLSDLGQGVPFRAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~---------~~~~~~~D~~~~lPf~~~sFD~v~s~~ 43 (77)
+|++++|++.|+++.. ..+++.+|+. ..+ ++||+|++..
T Consensus 100 veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~-~~~---~~fD~Ii~d~ 147 (262)
T 2cmg_A 100 VQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLD-LDI---KKYDLIFCLQ 147 (262)
T ss_dssp ECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGG-SCC---CCEEEEEESS
T ss_pred EECCHHHHHHHHHHHHhhccccCCCeEEEEechHH-HHH---hhCCEEEECC
Confidence 5999999999987642 3578888863 343 8899999873
No 221
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.14 E-value=0.004 Score=45.11 Aligned_cols=56 Identities=14% Similarity=0.092 Sum_probs=38.3
Q ss_pred cEEEccCCC--CCCCCCCceeeeeeccchhhhcccCCCC--------------CCh--------HHHHHHHHHHHHHHHh
Q psy4109 19 DLVLSDLGQ--GVPFRAGAFDGAISISALQWLCNADKTS--------------HNP--------AKRLYKFFSSLFACLW 74 (77)
Q Consensus 19 ~~~~~D~~~--~lPf~~~sFD~v~s~~~l~w~~d~~~~~--------------~~p--------~~~l~~~~~~l~~~L~ 74 (77)
-++.|..+. .-.|++++||.++|++++||+.+..... +.+ .+.+..||+..++.|+
T Consensus 121 ~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~ 200 (359)
T 1m6e_X 121 CFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVV 200 (359)
T ss_dssp EEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBC
T ss_pred EEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 355565442 3678999999999999999997743211 111 4567777887777765
No 222
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=96.08 E-value=0.0027 Score=44.57 Aligned_cols=56 Identities=14% Similarity=0.000 Sum_probs=33.2
Q ss_pred CCcE-EEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 17 EGDL-VLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 17 ~~~~-~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+.++ +++|+ ..+|+. ++||+|+|+.+.+|.............-+++.++.+++.|+
T Consensus 106 ~v~~~i~gD~-~~~~~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lk 162 (290)
T 2xyq_A 106 DADSTLIGDC-ATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLA 162 (290)
T ss_dssp SSSEEEESCG-GGCCCS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEE
T ss_pred CCEEEEECcc-ccCCcc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcC
Confidence 4678 99998 456664 78999999865444211111111112334567777777775
No 223
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=96.06 E-value=0.00072 Score=45.06 Aligned_cols=42 Identities=10% Similarity=0.158 Sum_probs=28.4
Q ss_pred CCCC-HHHHHHH---HhcC-----CCCcEEEccCCCCCCCC-CCceeeeeecc
Q psy4109 1 MKKN-AFYTNVA---RDRE-----VEGDLVLSDLGQGVPFR-AGAFDGAISIS 43 (77)
Q Consensus 1 iDiS-~~ML~~A---~~r~-----~~~~~~~~D~~~~lPf~-~~sFD~v~s~~ 43 (77)
+|+| +.|+++| +++. .+.+++++|+ +.+|.. .+.+|.++++.
T Consensus 54 vD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~-~~l~~~~~d~v~~i~~~~ 105 (225)
T 3p2e_A 54 IDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAA-ESLPFELKNIADSISILF 105 (225)
T ss_dssp ECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBT-TBCCGGGTTCEEEEEEES
T ss_pred EeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCH-HHhhhhccCeEEEEEEeC
Confidence 6999 8888887 5542 3468899997 567642 25566666654
No 224
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=95.98 E-value=0.00092 Score=47.16 Aligned_cols=59 Identities=10% Similarity=-0.081 Sum_probs=36.2
Q ss_pred CCCCHHHHHHHHhcCCCCcEE-EccCCCCCC---CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 1 MKKNAFYTNVARDREVEGDLV-LSDLGQGVP---FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~-~~D~~~~lP---f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+|+|++||+.+.++.+....+ ..|+ ..++ +...+||.+++..+++++ ...|.++++.|+
T Consensus 114 VDvs~~mL~~a~r~~~rv~~~~~~ni-~~l~~~~l~~~~fD~v~~d~sf~sl--------------~~vL~e~~rvLk 176 (291)
T 3hp7_A 114 VDVGTNQLVWKLRQDDRVRSMEQYNF-RYAEPVDFTEGLPSFASIDVSFISL--------------NLILPALAKILV 176 (291)
T ss_dssp ECSSSSCSCHHHHTCTTEEEECSCCG-GGCCGGGCTTCCCSEEEECCSSSCG--------------GGTHHHHHHHSC
T ss_pred EECCHHHHHHHHHhCcccceecccCc-eecchhhCCCCCCCEEEEEeeHhhH--------------HHHHHHHHHHcC
Confidence 699999999965543222111 1222 1122 234569999999888765 346777777765
No 225
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=95.97 E-value=0.0004 Score=46.81 Aligned_cols=54 Identities=7% Similarity=-0.069 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHhcCCC--------CcEEE-ccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDREVE--------GDLVL-SDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFA 71 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~--------~~~~~-~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~ 71 (77)
+|+|++||+.|+++... ..++. .|+ ...++...+||.++++. ..+|.++++
T Consensus 66 vDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~D~v~~~l-------------------~~~l~~i~r 125 (232)
T 3opn_A 66 LDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADF-EQGRPSFTSIDVSFISL-------------------DLILPPLYE 125 (232)
T ss_dssp ECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGC-CSCCCSEEEECCSSSCG-------------------GGTHHHHHH
T ss_pred EcCCHHHHHHHHHhCccccccccceEEEeCHhHc-CcCCCCEEEEEEEhhhH-------------------HHHHHHHHH
Confidence 69999999998876532 23333 343 22234567888887763 236777777
Q ss_pred HHh
Q psy4109 72 CLW 74 (77)
Q Consensus 72 ~L~ 74 (77)
.|+
T Consensus 126 vLk 128 (232)
T 3opn_A 126 ILE 128 (232)
T ss_dssp HSC
T ss_pred hcc
Confidence 765
No 226
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=95.96 E-value=0.0014 Score=47.57 Aligned_cols=43 Identities=12% Similarity=0.033 Sum_probs=31.2
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~ 43 (77)
+|+|+.|++.|+++. ...++.++|+.+.++..++.||.|++..
T Consensus 242 vDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dp 288 (393)
T 4dmg_A 242 VDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDP 288 (393)
T ss_dssp EESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECC
T ss_pred EECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECC
Confidence 599999999998774 3346788887443333345599999874
No 227
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=95.95 E-value=0.018 Score=39.11 Aligned_cols=44 Identities=16% Similarity=-0.111 Sum_probs=30.4
Q ss_pred CCCCHHHH----HHHHhcCCCCcEEEccCCCCCC--CCCCceeeeeeccch
Q psy4109 1 MKKNAFYT----NVARDREVEGDLVLSDLGQGVP--FRAGAFDGAISISAL 45 (77)
Q Consensus 1 iDiS~~ML----~~A~~r~~~~~~~~~D~~~~lP--f~~~sFD~v~s~~~l 45 (77)
+|+|+.|+ +.|+++ .+..++++|+..+.+ ...++||.|++..+.
T Consensus 107 vD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~ 156 (232)
T 3id6_C 107 VEFSPRVVRELLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYVDIAQ 156 (232)
T ss_dssp EECCHHHHHHHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEECCCC
T ss_pred EECcHHHHHHHHHHhhhc-CCeEEEEcccccchhhhccccceEEEEecCCC
Confidence 58999885 445554 467889999754221 125789999998653
No 228
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=95.90 E-value=0.00012 Score=49.31 Aligned_cols=60 Identities=12% Similarity=-0.034 Sum_probs=40.7
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCC-----CCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFR-----AGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSL 69 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~-----~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l 69 (77)
+|+|++|++.|+++. ...+++++|+.+.+|.. +++||.|++.... .....+|+.+
T Consensus 91 iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~~--------------~~~~~~l~~~ 156 (242)
T 3r3h_A 91 CDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDADK--------------TNYLNYYELA 156 (242)
T ss_dssp EECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESCG--------------GGHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCCh--------------HHhHHHHHHH
Confidence 589999999888763 14688999975444432 5899999987431 1223467777
Q ss_pred HHHHh
Q psy4109 70 FACLW 74 (77)
Q Consensus 70 ~~~L~ 74 (77)
++.|+
T Consensus 157 ~~~Lk 161 (242)
T 3r3h_A 157 LKLVT 161 (242)
T ss_dssp HHHEE
T ss_pred HHhcC
Confidence 66654
No 229
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=95.90 E-value=0.0075 Score=43.99 Aligned_cols=40 Identities=10% Similarity=0.092 Sum_probs=31.6
Q ss_pred CCCCHHHHHHHHhcC----C-CCcEEEccCCCCCC--CCCCceeeeee
Q psy4109 1 MKKNAFYTNVARDRE----V-EGDLVLSDLGQGVP--FRAGAFDGAIS 41 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~-~~~~~~~D~~~~lP--f~~~sFD~v~s 41 (77)
+|+|+.|++.++++. . +..++++|+. .++ +.+++||.|++
T Consensus 290 ~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~-~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 290 FDVDKMRMKRLKDFVKRMGIKIVKPLVKDAR-KAPEIIGEEVADKVLL 336 (450)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCSEEEECSCTT-CCSSSSCSSCEEEEEE
T ss_pred EcCCHHHHHHHHHHHHHcCCCcEEEEEcChh-hcchhhccCCCCEEEE
Confidence 599999999998772 2 4678999974 565 66689999996
No 230
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=95.75 E-value=0.0097 Score=41.57 Aligned_cols=47 Identities=13% Similarity=0.017 Sum_probs=37.5
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCCCCCceeeeeeccchhhhc
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLC 49 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~ 49 (77)
+|+++.|++.|+.+. ....++++|... +..++.||.|+++.-++|+.
T Consensus 165 iDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~--~~~~~~fD~Ii~NPPfg~~~ 215 (344)
T 2f8l_A 165 VDVDDLLISLALVGADLQRQKMTLLHQDGLA--NLLVDPVDVVISDLPVGYYP 215 (344)
T ss_dssp EESCHHHHHHHHHHHHHHTCCCEEEESCTTS--CCCCCCEEEEEEECCCSEES
T ss_pred EECCHHHHHHHHHHHHhCCCCceEEECCCCC--ccccCCccEEEECCCCCCcC
Confidence 589999999998763 356899999744 44578899999999887764
No 231
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=95.73 E-value=0.024 Score=39.91 Aligned_cols=58 Identities=12% Similarity=0.019 Sum_probs=43.9
Q ss_pred HHHHHHHHhcCC-----CCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 5 AFYTNVARDREV-----EGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 5 ~~ML~~A~~r~~-----~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
|+|++.|+++.. +.+++.+|+- ..|+. .+|+++...++|.+.| +...+.+++++++|+
T Consensus 212 p~v~~~a~~~~~~~~~~rv~~~~gD~~-~~~~~--~~D~~~~~~vlh~~~d---------~~~~~iL~~~~~al~ 274 (353)
T 4a6d_A 212 PEVVWTAKQHFSFQEEEQIDFQEGDFF-KDPLP--EADLYILARVLHDWAD---------GKCSHLLERIYHTCK 274 (353)
T ss_dssp HHHHHHHHHHSCC--CCSEEEEESCTT-TSCCC--CCSEEEEESSGGGSCH---------HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhhhcccCceeeecCccc-cCCCC--CceEEEeeeecccCCH---------HHHHHHHHHHHhhCC
Confidence 889999987742 3588999984 34543 4799999999998754 345668888888875
No 232
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.72 E-value=0.0055 Score=41.97 Aligned_cols=41 Identities=5% Similarity=0.018 Sum_probs=32.6
Q ss_pred CCCCHHHHHHHHhcC---CCCcEEEccCCCCCCCCC----Cceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE---VEGDLVLSDLGQGVPFRA----GAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---~~~~~~~~D~~~~lPf~~----~sFD~v~s~~ 43 (77)
+|++++|++.++++. .+.+++++|+ ..+|+.+ +.|| |++|.
T Consensus 57 vEid~~~~~~~~~~~~~~~~v~~i~~D~-~~~~~~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 57 VEIDRDLVAFLQKKYNQQKNITIYQNDA-LQFDFSSVKTDKPLR-VVGNL 104 (255)
T ss_dssp EECCHHHHHHHHHHHTTCTTEEEEESCT-TTCCGGGSCCSSCEE-EEEEC
T ss_pred EECCHHHHHHHHHHHhhCCCcEEEEcch-HhCCHHHhccCCCeE-EEecC
Confidence 589999999999875 3468999997 5677653 5788 88885
No 233
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.71 E-value=0.01 Score=45.93 Aligned_cols=67 Identities=15% Similarity=0.168 Sum_probs=44.0
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCC--CCCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGV--PFRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFAC 72 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~l--Pf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~ 72 (77)
+|+++.|++.|+++. . ..++.++|+. .+ |+.+++||.|++|.=+. .-....+.+..+++.+.+.
T Consensus 262 ~Did~~av~~A~~N~~~agv~~~i~~~~~D~~-~~~~~~~~~~~d~Iv~NPPYG-------~Rlg~~~~l~~ly~~l~~~ 333 (703)
T 3v97_A 262 SDSDARVIQRARTNARLAGIGELITFEVKDVA-QLTNPLPKGPYGTVLSNPPYG-------ERLDSEPALIALHSLLGRI 333 (703)
T ss_dssp EESCHHHHHHHHHHHHHTTCGGGEEEEECCGG-GCCCSCTTCCCCEEEECCCCC-------C---CCHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChh-hCccccccCCCCEEEeCCCcc-------ccccchhHHHHHHHHHHHH
Confidence 489999999999874 2 2478999974 45 55555899999995331 0111234566666666666
Q ss_pred Hhh
Q psy4109 73 LWS 75 (77)
Q Consensus 73 L~~ 75 (77)
|+.
T Consensus 334 lk~ 336 (703)
T 3v97_A 334 MKN 336 (703)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 234
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=95.68 E-value=0.0032 Score=41.62 Aligned_cols=44 Identities=14% Similarity=-0.025 Sum_probs=31.6
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCC---CCCCCC--Cceeeeeeccc
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQ---GVPFRA--GAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~---~lPf~~--~sFD~v~s~~~ 44 (77)
+|+|++|++.|+++. ...+++++|+.+ .+|+.+ ++||.|++...
T Consensus 103 iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~ 157 (232)
T 3cbg_A 103 CDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDAD 157 (232)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECSC
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECCC
Confidence 589999999998763 135788888532 234444 88999998743
No 235
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=95.67 E-value=0.0018 Score=43.11 Aligned_cols=42 Identities=12% Similarity=0.014 Sum_probs=31.2
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCC------CCCceeeeeec
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPF------RAGAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf------~~~sFD~v~s~ 42 (77)
+|+|++|++.|+++. . ..+++++|+.+.+|. .+++||.|++.
T Consensus 101 iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d 154 (237)
T 3c3y_A 101 IDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVD 154 (237)
T ss_dssp EESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEEC
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEEC
Confidence 589999999998763 1 257888987443442 26899999976
No 236
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=95.65 E-value=0.0014 Score=44.68 Aligned_cols=41 Identities=10% Similarity=0.034 Sum_probs=32.1
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCC----CCCceeeeeec
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPF----RAGAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf----~~~sFD~v~s~ 42 (77)
+|+|+.|++.++++. .+.+++++|+ ..++. .+++||.|++.
T Consensus 114 vD~~~~~l~~~~~~~~~~g~~~v~~~~~D~-~~~~~~~~~~~~~fD~Vl~d 163 (274)
T 3ajd_A 114 VEISKTRTKALKSNINRMGVLNTIIINADM-RKYKDYLLKNEIFFDKILLD 163 (274)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEESCH-HHHHHHHHHTTCCEEEEEEE
T ss_pred ECCCHHHHHHHHHHHHHhCCCcEEEEeCCh-HhcchhhhhccccCCEEEEc
Confidence 599999999998773 2467899997 45554 37789999987
No 237
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=95.55 E-value=0.02 Score=42.52 Aligned_cols=40 Identities=15% Similarity=-0.043 Sum_probs=31.8
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCC-CCCceeeeee
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPF-RAGAFDGAIS 41 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf-~~~sFD~v~s 41 (77)
+|+|+.|++.++++. .+..++++|+ ..++. .+++||.|++
T Consensus 148 vDis~~~l~~~~~n~~r~g~~nv~~~~~D~-~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 148 NEFSASRVKVLHANISRCGISNVALTHFDG-RVFGAAVPEMFDAILL 193 (479)
T ss_dssp ECSSHHHHHHHHHHHHHHTCCSEEEECCCS-TTHHHHSTTCEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCcEEEEeCCH-HHhhhhccccCCEEEE
Confidence 599999999998773 2467889997 45664 5789999997
No 238
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=95.52 E-value=0.011 Score=39.78 Aligned_cols=44 Identities=5% Similarity=0.068 Sum_probs=33.5
Q ss_pred CCCCHHHHHHHHhcC---CCCcEEEccCCCCCCCCC-Cceeeeeeccchh
Q psy4109 1 MKKNAFYTNVARDRE---VEGDLVLSDLGQGVPFRA-GAFDGAISISALQ 46 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---~~~~~~~~D~~~~lPf~~-~sFD~v~s~~~l~ 46 (77)
+|+|++|++.|+++. .+.+++++|+ ..+|+.+ ..| .|+++.-++
T Consensus 58 vD~~~~~~~~a~~~~~~~~~v~~~~~D~-~~~~~~~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 58 IEIDHKLCKTTENKLVDHDNFQVLNKDI-LQFKFPKNQSY-KIFGNIPYN 105 (244)
T ss_dssp ECSCHHHHHHHHHHTTTCCSEEEECCCG-GGCCCCSSCCC-EEEEECCGG
T ss_pred EECCHHHHHHHHHhhccCCCeEEEEChH-HhCCcccCCCe-EEEEeCCcc
Confidence 599999999999875 3468999997 5688874 456 577775543
No 239
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=95.49 E-value=0.0044 Score=45.81 Aligned_cols=62 Identities=10% Similarity=-0.042 Sum_probs=38.3
Q ss_pred CCCCHHHHHHH-------HhcC-------CCCcEEEccCCC-CCCC--CCCceeeeeeccchhhhcccCCCCCChHHHHH
Q psy4109 1 MKKNAFYTNVA-------RDRE-------VEGDLVLSDLGQ-GVPF--RAGAFDGAISISALQWLCNADKTSHNPAKRLY 63 (77)
Q Consensus 1 iDiS~~ML~~A-------~~r~-------~~~~~~~~D~~~-~lPf--~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~ 63 (77)
+|+|++|++.| +++. .+.+++++|... ..+| ..++||+|+++.++ +. ..+.
T Consensus 272 VDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~-----------~d~~ 339 (433)
T 1u2z_A 272 CEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL-FD-----------EDLN 339 (433)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT-CC-----------HHHH
T ss_pred EeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccccCCCCEEEEeCcc-cc-----------ccHH
Confidence 58899888887 6652 235677776322 2233 35789999987655 21 2334
Q ss_pred HHHHHHHHHHh
Q psy4109 64 KFFSSLFACLW 74 (77)
Q Consensus 64 ~~~~~l~~~L~ 74 (77)
..|+++++.|+
T Consensus 340 ~~L~el~r~LK 350 (433)
T 1u2z_A 340 KKVEKILQTAK 350 (433)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHHhCC
Confidence 55666766664
No 240
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=95.41 E-value=0.00081 Score=43.69 Aligned_cols=43 Identities=23% Similarity=0.148 Sum_probs=30.6
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCC-CCC----Cceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVP-FRA----GAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lP-f~~----~sFD~v~s~~ 43 (77)
+|+|++|++.|+++. ...+++++|+.+.++ +.+ ++||.|++..
T Consensus 100 vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~ 153 (229)
T 2avd_A 100 CEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDA 153 (229)
T ss_dssp EESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECS
T ss_pred EECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECC
Confidence 589999999998763 245788888643222 111 7899999864
No 241
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=95.39 E-value=0.0016 Score=46.09 Aligned_cols=73 Identities=8% Similarity=-0.043 Sum_probs=43.2
Q ss_pred CCCCHHHHHHHHhcC----C---CCcEEEccCCCCCCC---CCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE----V---EGDLVLSDLGQGVPF---RAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLF 70 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~---~~~~~~~D~~~~lPf---~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~ 70 (77)
+|+|+.|++.|+++. . ..+++++|+.+.++. .+++||.|+++.-..-. ..........+.+++++..++
T Consensus 181 VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~-~~~~~~~~~~~~~~~ll~~~~ 259 (332)
T 2igt_A 181 VDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGR-GTHGEVWQLFDHLPLMLDICR 259 (332)
T ss_dssp ECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEE-CTTCCEEEHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccC-CchHHHHHHHHHHHHHHHHHH
Confidence 699999999999873 1 257899997432221 16789999996421000 000001123455667777776
Q ss_pred HHHh
Q psy4109 71 ACLW 74 (77)
Q Consensus 71 ~~L~ 74 (77)
+.|+
T Consensus 260 ~~Lk 263 (332)
T 2igt_A 260 EILS 263 (332)
T ss_dssp HTBC
T ss_pred HhcC
Confidence 6664
No 242
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=95.25 E-value=0.0056 Score=41.80 Aligned_cols=50 Identities=6% Similarity=-0.001 Sum_probs=37.9
Q ss_pred CCCCHHHHHHHHhcCC---CCcEEEccCCCCCCCCC-----Cceeeeeeccc--------hhhhccc
Q psy4109 1 MKKNAFYTNVARDREV---EGDLVLSDLGQGVPFRA-----GAFDGAISISA--------LQWLCNA 51 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~---~~~~~~~D~~~~lPf~~-----~sFD~v~s~~~--------l~w~~d~ 51 (77)
+|++++|++.++++.. +.+++++|+ ..+|+.+ +..|.|++|.- ++|+.+.
T Consensus 49 vEid~~~~~~a~~~~~~~~~v~~i~~D~-~~~~~~~~~~~~~~~~~vvsNlPY~i~~~il~~ll~~~ 114 (252)
T 1qyr_A 49 IELDRDLAARLQTHPFLGPKLTIYQQDA-MTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYT 114 (252)
T ss_dssp ECCCHHHHHHHHTCTTTGGGEEEECSCG-GGCCHHHHHHHHTSCEEEEEECCTTTHHHHHHHHHTTG
T ss_pred EECCHHHHHHHHHHhccCCceEEEECch-hhCCHHHhhcccCCceEEEECCCCCccHHHHHHHHhcC
Confidence 5999999999998863 468999997 5677643 24579999975 6787643
No 243
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=95.07 E-value=0.003 Score=45.28 Aligned_cols=72 Identities=13% Similarity=0.029 Sum_probs=45.0
Q ss_pred CCCCHHHHHHHHhcC----C---CCcEEEccCCCCCCC---CCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE----V---EGDLVLSDLGQGVPF---RAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLF 70 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~---~~~~~~~D~~~~lPf---~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~ 70 (77)
+|+|++|++.|+++. . +.+++++|+.+.++. .+++||.|++..-.. ...........+.+++++...+
T Consensus 241 vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~--~~~~~~~~~~~~~~~~ll~~~~ 318 (385)
T 2b78_A 241 VDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSF--ARNKKEVFSVSKDYHKLIRQGL 318 (385)
T ss_dssp EESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-------CCCCHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCC--CCChhhHHHHHHHHHHHHHHHH
Confidence 599999999998763 2 457999997433442 256899999864210 0000123445666777777766
Q ss_pred HHHh
Q psy4109 71 ACLW 74 (77)
Q Consensus 71 ~~L~ 74 (77)
+.|+
T Consensus 319 ~~L~ 322 (385)
T 2b78_A 319 EILS 322 (385)
T ss_dssp HTEE
T ss_pred HhcC
Confidence 6554
No 244
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=94.63 E-value=0.0084 Score=41.56 Aligned_cols=44 Identities=14% Similarity=0.034 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHhcCC--CCcEEEccCCCCCCCCCC-ceeeeeeccch
Q psy4109 1 MKKNAFYTNVARDREV--EGDLVLSDLGQGVPFRAG-AFDGAISISAL 45 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~--~~~~~~~D~~~~lPf~~~-sFD~v~s~~~l 45 (77)
+|++++|++.++++.. +.+++++|+ ..+++.+. .||.|++|.-+
T Consensus 74 vEid~~~~~~l~~~~~~~~v~vi~~D~-l~~~~~~~~~~~~iv~NlPy 120 (271)
T 3fut_A 74 IEKDLRLRPVLEETLSGLPVRLVFQDA-LLYPWEEVPQGSLLVANLPY 120 (271)
T ss_dssp EESCGGGHHHHHHHTTTSSEEEEESCG-GGSCGGGSCTTEEEEEEECS
T ss_pred EECCHHHHHHHHHhcCCCCEEEEECCh-hhCChhhccCccEEEecCcc
Confidence 5899999999998864 468999997 56777643 69999999743
No 245
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=94.43 E-value=0.0065 Score=45.23 Aligned_cols=40 Identities=3% Similarity=-0.115 Sum_probs=31.1
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCC-CCCCceeeeee
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVP-FRAGAFDGAIS 41 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lP-f~~~sFD~v~s 41 (77)
+|+|+.|++.++++. ....++++|+ ..++ +.+++||.|++
T Consensus 132 vDis~~~l~~a~~n~~r~G~~v~~~~~Da-~~l~~~~~~~FD~Il~ 176 (464)
T 3m6w_A 132 NEVDGKRVRGLLENVERWGAPLAVTQAPP-RALAEAFGTYFHRVLL 176 (464)
T ss_dssp ECSCHHHHHHHHHHHHHHCCCCEEECSCH-HHHHHHHCSCEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCeEEEEECCH-HHhhhhccccCCEEEE
Confidence 599999999998773 2367888897 4455 45789999995
No 246
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=94.39 E-value=0.013 Score=39.93 Aligned_cols=43 Identities=12% Similarity=-0.161 Sum_probs=31.1
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeeccc
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~ 44 (77)
+|+|+++++.|+++. . ..++.++|..+ .+..++.||+|+..+.
T Consensus 51 vDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~-~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 51 GEVVNGPYQSALKNVSEHGLTSKIDVRLANGLS-AFEEADNIDTITICGM 99 (230)
T ss_dssp EESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-GCCGGGCCCEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEECchhh-ccccccccCEEEEeCC
Confidence 599999999999773 2 35889999754 3333347999876553
No 247
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=94.35 E-value=0.0074 Score=42.40 Aligned_cols=42 Identities=12% Similarity=0.139 Sum_probs=31.8
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCCC--C---CCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVPF--R---AGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lPf--~---~~sFD~v~s~~ 43 (77)
+|+|++|++.|+++. ....++++|+ ..+|. . .++||+|++..
T Consensus 56 vD~d~~al~~A~~~~~~~g~~v~~v~~d~-~~l~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 56 IDVDSEVLRIAEEKLKEFSDRVSLFKVSY-READFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp EESCHHHHHHHHHHTGGGTTTEEEEECCG-GGHHHHHHHTTCSCEEEEEEEC
T ss_pred EECCHHHHHHHHHHHHhcCCcEEEEECCH-HHHHHHHHhcCCCCCCEEEEcC
Confidence 599999999999875 2457899997 45652 2 16899999754
No 248
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=94.24 E-value=0.015 Score=40.04 Aligned_cols=43 Identities=12% Similarity=-0.095 Sum_probs=30.7
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeeccc
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~ 44 (77)
+|+|+++++.|+++. . ..++.++|..+ .+..+..||.|+..++
T Consensus 51 vDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~-~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 51 GEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLA-VIEKKDAIDTIVIAGM 99 (244)
T ss_dssp EESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-GCCGGGCCCEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEEecchhh-ccCccccccEEEEeCC
Confidence 599999999999873 2 25889999754 3222336999886643
No 249
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=94.19 E-value=0.056 Score=38.97 Aligned_cols=40 Identities=10% Similarity=-0.001 Sum_probs=31.7
Q ss_pred CCCCHHHHHHHHhcC----CCCcEEEccCCCCCC--CCCCceeeeee
Q psy4109 1 MKKNAFYTNVARDRE----VEGDLVLSDLGQGVP--FRAGAFDGAIS 41 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~~~~D~~~~lP--f~~~sFD~v~s 41 (77)
+|+|+.|++.++++. ....++++|+. .++ +.+++||.|++
T Consensus 276 ~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~-~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 276 VDIDEQRLSRVYDNLKRLGMKATVKQGDGR-YPSQWCGEQQFDRILL 321 (429)
T ss_dssp EESSTTTHHHHHHHHHHTTCCCEEEECCTT-CTHHHHTTCCEEEEEE
T ss_pred ECCCHHHHHHHHHHHHHcCCCeEEEeCchh-hchhhcccCCCCEEEE
Confidence 589999999998773 34688999974 565 66789999996
No 250
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=94.12 E-value=0.011 Score=43.06 Aligned_cols=43 Identities=9% Similarity=0.001 Sum_probs=31.9
Q ss_pred CCCCHHHHHHHHhcCC-------------CCcEEEccCCCCCCC---CCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDREV-------------EGDLVLSDLGQGVPF---RAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~-------------~~~~~~~D~~~~lPf---~~~sFD~v~s~~ 43 (77)
+||+++|++.|+++.+ ..+++.+|+.+-+.- .++.||+||.-.
T Consensus 217 VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~ 275 (364)
T 2qfm_A 217 VEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDL 275 (364)
T ss_dssp EESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEEC
T ss_pred EECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECC
Confidence 5899999999998753 247788886432321 367899999975
No 251
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=94.12 E-value=0.017 Score=39.26 Aligned_cols=41 Identities=5% Similarity=-0.219 Sum_probs=30.6
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCC-ceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAG-AFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~-sFD~v~s~~ 43 (77)
+|+|+++++.|+++. . ..++.++|..+.+| ++ .||+|+.++
T Consensus 45 vDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~--~~~~~D~IviaG 92 (225)
T 3kr9_A 45 GEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFE--ETDQVSVITIAG 92 (225)
T ss_dssp EESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC--GGGCCCEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcc--cCcCCCEEEEcC
Confidence 599999999999773 2 25789999755454 33 699988654
No 252
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=93.96 E-value=0.0061 Score=44.86 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=33.0
Q ss_pred CCCCHHHHHHHHhcC------C-CCcEEEccCCCCCCC-CCCceeeeeeccc
Q psy4109 1 MKKNAFYTNVARDRE------V-EGDLVLSDLGQGVPF-RAGAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~-~~~~~~~D~~~~lPf-~~~sFD~v~s~~~ 44 (77)
+|+|+.|++.|+++. . +.+++++|+.+.++. .+++||+|++...
T Consensus 121 VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPP 172 (410)
T 3ll7_A 121 IERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPA 172 (410)
T ss_dssp EESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCE
T ss_pred EECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCC
Confidence 599999999998873 1 368999998543443 3568999998643
No 253
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=93.92 E-value=0.0075 Score=42.91 Aligned_cols=43 Identities=9% Similarity=-0.055 Sum_probs=31.5
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCC---CCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPF---RAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf---~~~sFD~v~s~~ 43 (77)
+|+|+.|++.|+++. .+.+++++|+.+.++. .+++||.|++..
T Consensus 237 vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 237 VDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 599999999998773 2368899997432221 267899999853
No 254
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=93.63 E-value=0.0046 Score=42.34 Aligned_cols=47 Identities=11% Similarity=-0.029 Sum_probs=34.1
Q ss_pred CCCCH-------HHHHHHHhcC-----CC-CcEEEccCCCCCC-CCC--Cceeeeeeccchhh
Q psy4109 1 MKKNA-------FYTNVARDRE-----VE-GDLVLSDLGQGVP-FRA--GAFDGAISISALQW 47 (77)
Q Consensus 1 iDiS~-------~ML~~A~~r~-----~~-~~~~~~D~~~~lP-f~~--~sFD~v~s~~~l~w 47 (77)
+|+|+ +|++.|+++. .+ .+++++|+.+-++ +.+ ++||+|++...+.+
T Consensus 111 vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 111 FEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp EECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCCSEEEECCCC--
T ss_pred EECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCccEEEECCCCCC
Confidence 58999 9999998763 13 6799999743334 444 78999999987765
No 255
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=93.48 E-value=0.0051 Score=43.84 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=31.7
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCC---CCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPF---RAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf---~~~sFD~v~s~~ 43 (77)
+|+|+.|++.|+++. . +.+++++|+.+.++. .+++||.|++..
T Consensus 246 vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dp 297 (396)
T 2as0_A 246 IDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDP 297 (396)
T ss_dssp EESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred EeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECC
Confidence 599999999998773 1 457899997432232 267899999864
No 256
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=93.46 E-value=0.1 Score=36.82 Aligned_cols=65 Identities=23% Similarity=0.193 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHHhcC----------CCCcEEEccCCCCCCCCCCceeeeeeccchhhhcccCCCCCChHHHH--HHHHHH
Q psy4109 1 MKKNAFYTNVARDRE----------VEGDLVLSDLGQGVPFRAGAFDGAISISALQWLCNADKTSHNPAKRL--YKFFSS 68 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l--~~~~~~ 68 (77)
+||.+++++.|++-. +..+++.+|..+-+--.+++||+|+.-+. |+.. |...| ++||+.
T Consensus 113 VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~-----dp~~----~~~~L~t~eFy~~ 183 (294)
T 3o4f_A 113 VEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT-----DPIG----PGESLFTSAFYEG 183 (294)
T ss_dssp EESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCC-----CCCC----TTCCSSCCHHHHH
T ss_pred EcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCC-----CcCC----CchhhcCHHHHHH
Confidence 589999999998753 23578999976656567889999998753 2221 22222 568888
Q ss_pred HHHHHh
Q psy4109 69 LFACLW 74 (77)
Q Consensus 69 l~~~L~ 74 (77)
++++|+
T Consensus 184 ~~~~L~ 189 (294)
T 3o4f_A 184 CKRCLN 189 (294)
T ss_dssp HHHTEE
T ss_pred HHHHhC
Confidence 888775
No 257
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=93.41 E-value=0.0066 Score=38.19 Aligned_cols=56 Identities=13% Similarity=-0.053 Sum_probs=29.9
Q ss_pred CcEE-EccCCCCCC--------CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 18 GDLV-LSDLGQGVP--------FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 18 ~~~~-~~D~~~~lP--------f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
.+++ ++|+. ..+ +.+++||+|+|+.++++............+.+..+++.+++.|+
T Consensus 72 ~~~~~~~d~~-~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 136 (196)
T 2nyu_A 72 ATFLCPADVT-DPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQ 136 (196)
T ss_dssp CEEECSCCTT-SHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CeEEEeccCC-CHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhc
Confidence 5677 78863 332 34568999999876554211000000011222567777777765
No 258
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=93.34 E-value=0.013 Score=41.79 Aligned_cols=71 Identities=11% Similarity=0.096 Sum_probs=42.0
Q ss_pred CCCCHHHHHHHHhcC----C---CCcEEEccCCCCCCC---CCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE----V---EGDLVLSDLGQGVPF---RAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLF 70 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~---~~~~~~~D~~~~lPf---~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~ 70 (77)
+|+|++|++.|+++. . +.+++++|+.+.++. .++.||.|++..-. +....+......+.+.+++....
T Consensus 249 vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~--~~~~~~~~~~~~~~~~~~l~~~~ 326 (396)
T 3c0k_A 249 VDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPK--FVENKSQLMGACRGYKDINMLAI 326 (396)
T ss_dssp EESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSS--TTTCSSSSSCCCTHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEECCCC--CCCChhHHHHHHHHHHHHHHHHH
Confidence 599999999998763 2 457899997432221 15789999997421 10001112222345556666555
Q ss_pred HHH
Q psy4109 71 ACL 73 (77)
Q Consensus 71 ~~L 73 (77)
+.|
T Consensus 327 ~~L 329 (396)
T 3c0k_A 327 QLL 329 (396)
T ss_dssp HTE
T ss_pred Hhc
Confidence 544
No 259
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=93.29 E-value=0.031 Score=38.74 Aligned_cols=42 Identities=12% Similarity=-0.089 Sum_probs=31.6
Q ss_pred CCCCHHHHHHHHhc-CCCCcEEEccCCCCCCCCCC------ceeeeeecc
Q psy4109 1 MKKNAFYTNVARDR-EVEGDLVLSDLGQGVPFRAG------AFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r-~~~~~~~~~D~~~~lPf~~~------sFD~v~s~~ 43 (77)
+|+|++|++.|+++ ..+.+++++|+ ..+|+.+- ..+.|++|.
T Consensus 74 vDid~~~l~~a~~~~~~~v~~i~~D~-~~~~~~~~~~~~~~~~~~vv~Nl 122 (279)
T 3uzu_A 74 VELDRDLIGRLEQRFGELLELHAGDA-LTFDFGSIARPGDEPSLRIIGNL 122 (279)
T ss_dssp EECCHHHHHHHHHHHGGGEEEEESCG-GGCCGGGGSCSSSSCCEEEEEEC
T ss_pred EECCHHHHHHHHHhcCCCcEEEECCh-hcCChhHhcccccCCceEEEEcc
Confidence 58999999999988 33568999997 56877542 234688876
No 260
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=93.27 E-value=0.005 Score=41.06 Aligned_cols=41 Identities=10% Similarity=0.208 Sum_probs=32.3
Q ss_pred CCCCHHHHHHHHhcC---CCCcEEEccCCCCCCCCC-Cceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE---VEGDLVLSDLGQGVPFRA-GAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---~~~~~~~~D~~~~lPf~~-~sFD~v~s~~ 43 (77)
+|+|++|++.|+++. .+.+++++|+ ..+|+.+ ++| .|+|+.
T Consensus 57 id~~~~~~~~a~~~~~~~~~v~~~~~D~-~~~~~~~~~~f-~vv~n~ 101 (245)
T 1yub_A 57 IELDSHLFNLSSEKLKLNTRVTLIHQDI-LQFQFPNKQRY-KIVGNI 101 (245)
T ss_dssp SSSSCSSSSSSSCTTTTCSEEEECCSCC-TTTTCCCSSEE-EEEEEC
T ss_pred EECCHHHHHHHHHHhccCCceEEEECCh-hhcCcccCCCc-EEEEeC
Confidence 699999999998774 2458899997 5688774 789 788874
No 261
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=92.94 E-value=0.11 Score=37.67 Aligned_cols=44 Identities=9% Similarity=0.033 Sum_probs=33.2
Q ss_pred CCCCHHHHHHHHhcC----C---CCcEEEccCCCCCCCCCCceeeeeeccchh
Q psy4109 1 MKKNAFYTNVARDRE----V---EGDLVLSDLGQGVPFRAGAFDGAISISALQ 46 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~---~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~ 46 (77)
+|+++.|++.|+.+. . ...+.++|.. ..+.. +.||.|+++.-+.
T Consensus 214 ~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l-~~~~~-~~fD~Iv~NPPf~ 264 (445)
T 2okc_A 214 VDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSL-EKEPS-TLVDVILANPPFG 264 (445)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSSCCSEEECCTT-TSCCS-SCEEEEEECCCSS
T ss_pred EeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCC-CCccc-CCcCEEEECCCCC
Confidence 489999999998763 2 4678999974 34433 4899999997554
No 262
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=92.93 E-value=0.064 Score=37.55 Aligned_cols=39 Identities=15% Similarity=0.001 Sum_probs=30.8
Q ss_pred CCCCHHHHHHHHhcC------CCCcEEEccCCCCCCCCCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE------VEGDLVLSDLGQGVPFRAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~------~~~~~~~~D~~~~lPf~~~sFD~v~s~~ 43 (77)
+|+|+.|++.|+++. .+.+++++|+. .++ ++||.|+++.
T Consensus 222 vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~-~~~---~~fD~Vi~dp 266 (336)
T 2yx1_A 222 IDINPHAIELLKKNIKLNKLEHKIIPILSDVR-EVD---VKGNRVIMNL 266 (336)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEESCGG-GCC---CCEEEEEECC
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEECChH-Hhc---CCCcEEEECC
Confidence 599999999998773 23689999974 444 8899999873
No 263
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=92.83 E-value=0.046 Score=39.90 Aligned_cols=40 Identities=20% Similarity=0.278 Sum_probs=30.3
Q ss_pred CCCCHHHHHHHHhcCC----CCcEEEccCCCCCCCCCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDREV----EGDLVLSDLGQGVPFRAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~----~~~~~~~D~~~~lPf~~~sFD~v~s~~ 43 (77)
+|+|++|++.|+++.. ..+++++|+. .++. .+||.|++..
T Consensus 318 vD~s~~ai~~A~~n~~~ngl~v~~~~~d~~-~~~~--~~fD~Vv~dP 361 (425)
T 2jjq_A 318 FDSNEFAIEMARRNVEINNVDAEFEVASDR-EVSV--KGFDTVIVDP 361 (425)
T ss_dssp EESCHHHHHHHHHHHHHHTCCEEEEECCTT-TCCC--TTCSEEEECC
T ss_pred EECCHHHHHHHHHHHHHcCCcEEEEECChH-HcCc--cCCCEEEEcC
Confidence 5999999999987741 2679999984 4432 2899999853
No 264
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=90.75 E-value=0.15 Score=35.64 Aligned_cols=40 Identities=10% Similarity=-0.113 Sum_probs=29.9
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCCCCC---Cceeeeee
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVPFRA---GAFDGAIS 41 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lPf~~---~sFD~v~s 41 (77)
+|+|+.|++.++++. .+.+++++|+. .++... ++||.|+.
T Consensus 133 ~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~-~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 133 FDLDAKRLASMATLLARAGVSCCELAEEDFL-AVSPSDPRYHEVHYILL 180 (309)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEECCGG-GSCTTCGGGTTEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHcCCCeEEEEeCChH-hcCccccccCCCCEEEE
Confidence 599999999998773 24678999974 454332 57999996
No 265
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=90.13 E-value=0.19 Score=33.92 Aligned_cols=41 Identities=7% Similarity=0.058 Sum_probs=30.5
Q ss_pred CCCCHHHHHHHHhcC-CCCcEEEccCCCCCCCCCC--ceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE-VEGDLVLSDLGQGVPFRAG--AFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-~~~~~~~~D~~~~lPf~~~--sFD~v~s~~ 43 (77)
+|+|+.|++.++++. .+.+++++|+ ..+|+.+. .| .|+++.
T Consensus 60 vEid~~~~~~~~~~~~~~v~~i~~D~-~~~~~~~~~~~~-~vv~Nl 103 (249)
T 3ftd_A 60 IELDREMVENLKSIGDERLEVINEDA-SKFPFCSLGKEL-KVVGNL 103 (249)
T ss_dssp ECCCHHHHHHHTTSCCTTEEEECSCT-TTCCGGGSCSSE-EEEEEC
T ss_pred EECCHHHHHHHHhccCCCeEEEEcch-hhCChhHccCCc-EEEEEC
Confidence 599999999999872 2358999997 56887642 34 777775
No 266
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=89.52 E-value=0.037 Score=41.07 Aligned_cols=41 Identities=7% Similarity=-0.044 Sum_probs=30.9
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCC-CCCCceeeeeec
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVP-FRAGAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lP-f~~~sFD~v~s~ 42 (77)
+|+|+.|++.++++. .+..++++|+ ..++ +.+++||.|++.
T Consensus 136 vDis~~rl~~~~~n~~r~g~~nv~v~~~Da-~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 136 NEIFPKRAKILSENIERWGVSNAIVTNHAP-AELVPHFSGFFDRIVVD 182 (456)
T ss_dssp ECSSHHHHHHHHHHHHHHTCSSEEEECCCH-HHHHHHHTTCEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHcCCCceEEEeCCH-HHhhhhccccCCEEEEC
Confidence 599999999998773 2356778886 3454 457899999974
No 267
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=89.00 E-value=0.053 Score=38.37 Aligned_cols=42 Identities=2% Similarity=-0.180 Sum_probs=29.5
Q ss_pred CCCCHHHHHHHHhcC-----CCCcEEEccCCCCCC-CCC--------------Cceeeeeec
Q psy4109 1 MKKNAFYTNVARDRE-----VEGDLVLSDLGQGVP-FRA--------------GAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-----~~~~~~~~D~~~~lP-f~~--------------~sFD~v~s~ 42 (77)
+|+|++|++.|+++. .+.+++++|+.+-++ +.+ ++||.|+..
T Consensus 241 vd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~d 302 (369)
T 3bt7_A 241 TEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVD 302 (369)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEEC
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEEC
Confidence 599999999998763 246789999743222 221 379999864
No 268
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=88.77 E-value=0.46 Score=35.77 Aligned_cols=45 Identities=9% Similarity=-0.105 Sum_probs=32.9
Q ss_pred CCCCHHHHHHHHhcC----CCCcE--EEccCCCCCCCCCCceeeeeeccch
Q psy4109 1 MKKNAFYTNVARDRE----VEGDL--VLSDLGQGVPFRAGAFDGAISISAL 45 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~~~~--~~~D~~~~lPf~~~sFD~v~s~~~l 45 (77)
+|+++.|+++|+.+. ....+ .++|.-...++.+..||.|++|.=+
T Consensus 289 ~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf 339 (544)
T 3khk_A 289 QESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPF 339 (544)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCS
T ss_pred EeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCc
Confidence 589999999999763 22334 7888644334667899999998644
No 269
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=88.58 E-value=0.04 Score=35.58 Aligned_cols=28 Identities=11% Similarity=-0.001 Sum_probs=19.5
Q ss_pred CCcEEEccCCCCCCCC-------C----Cceeeeeeccch
Q psy4109 17 EGDLVLSDLGQGVPFR-------A----GAFDGAISISAL 45 (77)
Q Consensus 17 ~~~~~~~D~~~~lPf~-------~----~sFD~v~s~~~l 45 (77)
+..++++|+. ..+.. + ++||.|+|....
T Consensus 63 ~v~~~~~D~~-~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~ 101 (191)
T 3dou_A 63 GVRFIRCDIF-KETIFDDIDRALREEGIEKVDDVVSDAMA 101 (191)
T ss_dssp TCEEEECCTT-SSSHHHHHHHHHHHHTCSSEEEEEECCCC
T ss_pred CeEEEEcccc-CHHHHHHHHHHhhcccCCcceEEecCCCc
Confidence 4688999984 44421 1 489999998653
No 270
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=88.31 E-value=0.049 Score=38.00 Aligned_cols=26 Identities=15% Similarity=-0.006 Sum_probs=19.3
Q ss_pred CCcEEEc-cCCCCCCCCCCceeeeeeccch
Q psy4109 17 EGDLVLS-DLGQGVPFRAGAFDGAISISAL 45 (77)
Q Consensus 17 ~~~~~~~-D~~~~lPf~~~sFD~v~s~~~l 45 (77)
...++++ |+ ..+| +++||+|+|..++
T Consensus 132 ~v~~~~~~D~-~~l~--~~~fD~V~sd~~~ 158 (305)
T 2p41_A 132 LVRLQSGVDV-FFIP--PERCDTLLCDIGE 158 (305)
T ss_dssp GEEEECSCCT-TTSC--CCCCSEEEECCCC
T ss_pred CeEEEecccc-ccCC--cCCCCEEEECCcc
Confidence 3577888 86 3454 6789999998765
No 271
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=87.57 E-value=0.1 Score=36.71 Aligned_cols=39 Identities=13% Similarity=0.047 Sum_probs=27.6
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccch
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISAL 45 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l 45 (77)
+|+++.|++.| ...+++++|+. ..+ .++.||+|+++.-+
T Consensus 70 vDi~~~~~~~a----~~~~~~~~D~~-~~~-~~~~fD~Ii~NPPy 108 (421)
T 2ih2_A 70 VEIDPKALDLP----PWAEGILADFL-LWE-PGEAFDLILGNPPY 108 (421)
T ss_dssp EESCTTTCCCC----TTEEEEESCGG-GCC-CSSCEEEEEECCCC
T ss_pred EECCHHHHHhC----CCCcEEeCChh-hcC-ccCCCCEEEECcCc
Confidence 47777777776 23578899974 333 35789999998644
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=86.09 E-value=0.28 Score=36.78 Aligned_cols=46 Identities=9% Similarity=-0.103 Sum_probs=33.5
Q ss_pred CCCCHHHHHHHHhcC----CC------CcEEEccCCCCCCCCCCceeeeeeccchh
Q psy4109 1 MKKNAFYTNVARDRE----VE------GDLVLSDLGQGVPFRAGAFDGAISISALQ 46 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~~------~~~~~~D~~~~lPf~~~sFD~v~s~~~l~ 46 (77)
+|+++.|+++|+.+. .. ..+.++|.....++..+.||.|++|.-+.
T Consensus 217 iEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~ 272 (541)
T 2ar0_A 217 LELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFG 272 (541)
T ss_dssp EESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCT
T ss_pred EcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcc
Confidence 489999999998763 22 57899996432234567899999997543
No 273
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=85.20 E-value=0.5 Score=34.11 Aligned_cols=41 Identities=15% Similarity=0.136 Sum_probs=29.1
Q ss_pred CCCCHHHHHHHHhc----CC--CCcEEEccCCCCCCCCCCceeeeeeccc
Q psy4109 1 MKKNAFYTNVARDR----EV--EGDLVLSDLGQGVPFRAGAFDGAISISA 44 (77)
Q Consensus 1 iDiS~~ML~~A~~r----~~--~~~~~~~D~~~~lPf~~~sFD~v~s~~~ 44 (77)
+|.|+ |++.|++. +. ...++++|+ +.+.++ +.||+|+|...
T Consensus 112 ve~s~-~~~~a~~~~~~n~~~~~i~~i~~~~-~~~~lp-e~~DvivsE~~ 158 (376)
T 4hc4_A 112 VEASA-IWQQAREVVRFNGLEDRVHVLPGPV-ETVELP-EQVDAIVSEWM 158 (376)
T ss_dssp EECST-THHHHHHHHHHTTCTTTEEEEESCT-TTCCCS-SCEEEEECCCC
T ss_pred EeChH-HHHHHHHHHHHcCCCceEEEEeeee-eeecCC-ccccEEEeecc
Confidence 47775 88888754 22 357899998 557654 67999999543
No 274
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=84.20 E-value=0.93 Score=31.36 Aligned_cols=41 Identities=12% Similarity=0.045 Sum_probs=31.1
Q ss_pred CCCCHHHHHHHHhcC----C--CCcEEEccCCCCCCCCCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE----V--EGDLVLSDLGQGVPFRAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~--~~~~~~~D~~~~lPf~~~sFD~v~s~~ 43 (77)
+|+||..++.++++. . ...++++|+. .++ ..+.||.|+.+.
T Consensus 154 vD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~-~~~-~~~~~D~Vi~~~ 200 (278)
T 3k6r_A 154 IEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR-DFP-GENIADRILMGY 200 (278)
T ss_dssp ECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT-TCC-CCSCEEEEEECC
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEeCcHH-Hhc-cccCCCEEEECC
Confidence 599999999998763 2 2478899974 455 467899999773
No 275
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=83.16 E-value=0.18 Score=34.56 Aligned_cols=47 Identities=6% Similarity=-0.059 Sum_probs=30.6
Q ss_pred CCCCHHHHHHHHhc-------C-------CCCcEEEccCCCCCCCCCCceeeeeeccchhh
Q psy4109 1 MKKNAFYTNVARDR-------E-------VEGDLVLSDLGQGVPFRAGAFDGAISISALQW 47 (77)
Q Consensus 1 iDiS~~ML~~A~~r-------~-------~~~~~~~~D~~~~lPf~~~sFD~v~s~~~l~w 47 (77)
+|+|+.|.+.+++. . .+.+++++|+.+-++..++.||+|+....+.+
T Consensus 116 vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 116 LERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp EECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEEECCCCCC
T ss_pred EECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEEEcCCCCC
Confidence 58899874444332 1 13578999974435533457999999987754
No 276
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=78.90 E-value=0.34 Score=34.76 Aligned_cols=42 Identities=7% Similarity=-0.205 Sum_probs=29.3
Q ss_pred CCCCHHHHHHHHhcC-------------------CC-CcEEEccCCCCCCCCCCceeeeeec
Q psy4109 1 MKKNAFYTNVARDRE-------------------VE-GDLVLSDLGQGVPFRAGAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~-------------------~~-~~~~~~D~~~~lPf~~~sFD~v~s~ 42 (77)
+|+++++++.|+++. .. .+++++|+.+.+....+.||.|+..
T Consensus 77 vDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~~~~fD~I~lD 138 (378)
T 2dul_A 77 NDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLD 138 (378)
T ss_dssp EESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEEEEEC
T ss_pred EECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHhccCCCCEEEeC
Confidence 589999999998762 12 5788899743222225679999955
No 277
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=76.21 E-value=2.1 Score=32.25 Aligned_cols=43 Identities=26% Similarity=0.165 Sum_probs=31.8
Q ss_pred CCCCHHHHHHHHhcC----C---CCcEEEccCCCC-CC-CCCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE----V---EGDLVLSDLGQG-VP-FRAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~---~~~~~~~D~~~~-lP-f~~~sFD~v~s~~ 43 (77)
+|+++.|.++|+.+. . ...+.++|.-.. .| +.+..||.|++|.
T Consensus 254 ~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNP 305 (542)
T 3lkd_A 254 QELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNP 305 (542)
T ss_dssp EESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSEEEECC
T ss_pred EECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccEEEecC
Confidence 489999999998763 2 236888996432 14 5678999999995
No 278
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=73.09 E-value=0.95 Score=33.08 Aligned_cols=73 Identities=8% Similarity=-0.022 Sum_probs=39.8
Q ss_pred CCCCHHHHHHHHhcCC-------------CCcEEEccCCCCC---CCCCCceeeeeeccchhhhcccCCCCCChHHHHHH
Q psy4109 1 MKKNAFYTNVARDREV-------------EGDLVLSDLGQGV---PFRAGAFDGAISISALQWLCNADKTSHNPAKRLYK 64 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~-------------~~~~~~~D~~~~l---Pf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~ 64 (77)
+||.+++++.|++-.+ ..+++.+|..+-+ +-..+.||+|+.-..=.+. ..++.+....---++
T Consensus 234 VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~-s~~p~g~a~~Lft~e 312 (381)
T 3c6k_A 234 VEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPI-STSPEEDSTWEFLRL 312 (381)
T ss_dssp EESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCC-CCC----CHHHHHHH
T ss_pred EccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcc-cCcccCcchHHHHHH
Confidence 5899999999997642 1356677742111 1134679999986431111 000111112223367
Q ss_pred HHHHHHHHHh
Q psy4109 65 FFSSLFACLW 74 (77)
Q Consensus 65 ~~~~l~~~L~ 74 (77)
||+.++++|+
T Consensus 313 Fy~~~~~~L~ 322 (381)
T 3c6k_A 313 ILDLSMKVLK 322 (381)
T ss_dssp HHHHHHHTEE
T ss_pred HHHHHHHhcC
Confidence 7887777765
No 279
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=70.64 E-value=0.72 Score=33.47 Aligned_cols=43 Identities=7% Similarity=-0.141 Sum_probs=30.8
Q ss_pred CCCCHHHHHHHHhcC----C-C--CcEEEccCCCCCC-CCCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE----V-E--GDLVLSDLGQGVP-FRAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~-~--~~~~~~D~~~~lP-f~~~sFD~v~s~~ 43 (77)
+|+++.+++.++++. . + .+++++|+.+-+. -..+.||.|+...
T Consensus 83 vDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP 133 (392)
T 3axs_A 83 NDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDP 133 (392)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEECC
T ss_pred EECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEECC
Confidence 599999999998773 2 2 5788888643232 2256799999875
No 280
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=67.68 E-value=3.4 Score=27.35 Aligned_cols=43 Identities=14% Similarity=0.172 Sum_probs=29.7
Q ss_pred CCCCHHHHHHHHhcC---C-----CCcEEEccCCCC--------------CC--------C-CCCceeeeeecc
Q psy4109 1 MKKNAFYTNVARDRE---V-----EGDLVLSDLGQG--------------VP--------F-RAGAFDGAISIS 43 (77)
Q Consensus 1 iDiS~~ML~~A~~r~---~-----~~~~~~~D~~~~--------------lP--------f-~~~sFD~v~s~~ 43 (77)
+|.++++.+.|+++. . +.+++.+|+++. +| . ..++||.||--+
T Consensus 57 vE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg 130 (202)
T 3cvo_A 57 VESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDG 130 (202)
T ss_dssp EESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECS
T ss_pred EeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeC
Confidence 478899999998653 2 247888997543 22 1 247899999765
No 281
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=57.36 E-value=14 Score=22.36 Aligned_cols=14 Identities=7% Similarity=0.064 Sum_probs=11.3
Q ss_pred CCHHHHHHHHhcCC
Q psy4109 3 KNAFYTNVARDREV 16 (77)
Q Consensus 3 iS~~ML~~A~~r~~ 16 (77)
++|.+++.++++|.
T Consensus 44 ~~p~a~~~l~~~Gi 57 (139)
T 1jl3_A 44 LNPNAVKAMKEVGI 57 (139)
T ss_dssp CCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCC
Confidence 57888888888874
No 282
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=54.62 E-value=3.2 Score=28.13 Aligned_cols=49 Identities=14% Similarity=0.152 Sum_probs=29.4
Q ss_pred CcEEEccCCCCCCCCCC----ceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 18 GDLVLSDLGQGVPFRAG----AFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 18 ~~~~~~D~~~~lPf~~~----sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
.+++.||+.+.+|..++ .||+|+--. | .....|.=--..+|+.+++.|+
T Consensus 152 l~l~~GDa~~~l~~~~~~~~~~~D~iflD~---f-----sp~~~p~lw~~~~l~~l~~~L~ 204 (257)
T 2qy6_A 152 LDLWFGDINELISQLDDSLNQKVDAWFLDG---F-----APAKNPDMWTQNLFNAMARLAR 204 (257)
T ss_dssp EEEEESCHHHHGGGSCGGGTTCEEEEEECS---S-----CTTTCGGGCCHHHHHHHHHHEE
T ss_pred EEEEECcHHHHHhhcccccCCeEEEEEECC---C-----CcccChhhcCHHHHHHHHHHcC
Confidence 36889998665775444 799998752 1 1122331112467888887765
No 283
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=53.45 E-value=18 Score=21.90 Aligned_cols=37 Identities=14% Similarity=0.158 Sum_probs=20.7
Q ss_pred CCHHHHHHHHhcCCCCcEEEccCCCCC-CCCCCceeeeeec
Q psy4109 3 KNAFYTNVARDREVEGDLVLSDLGQGV-PFRAGAFDGAISI 42 (77)
Q Consensus 3 iS~~ML~~A~~r~~~~~~~~~D~~~~l-Pf~~~sFD~v~s~ 42 (77)
++|.+++.+++++....-.. +.++ ++.-..||.|+.+
T Consensus 45 ~~~~a~~~l~e~Gid~s~~~---sr~l~~~~~~~~DlIi~m 82 (134)
T 2l17_A 45 VHPTAIAMMEEVGIDISGQT---SDPIENFNADDYDVVISL 82 (134)
T ss_dssp CCHHHHHHHHTTTCCCSSCC---CCCGGGCCGGGCSEEEEC
T ss_pred CCHHHHHHHHHcCCCcccCc---cccCChHHhccCCEEEEe
Confidence 57888999998884321000 1111 1123457888877
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=51.28 E-value=6 Score=31.93 Aligned_cols=45 Identities=7% Similarity=0.003 Sum_probs=27.0
Q ss_pred CCCCHHHHHHH--HhcCC--------CC-cEEEccCCCCCCCCCCceeeeeeccch
Q psy4109 1 MKKNAFYTNVA--RDREV--------EG-DLVLSDLGQGVPFRAGAFDGAISISAL 45 (77)
Q Consensus 1 iDiS~~ML~~A--~~r~~--------~~-~~~~~D~~~~lPf~~~sFD~v~s~~~l 45 (77)
+|+++.+++.| +.+.. .. .+...|....-+...+.||.|++|.=+
T Consensus 354 vEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPY 409 (878)
T 3s1s_A 354 NDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPY 409 (878)
T ss_dssp ECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBC
T ss_pred EECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCCEEEECCCc
Confidence 48999999999 43321 11 233334322123456789999999743
No 285
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=50.98 E-value=3.3 Score=29.10 Aligned_cols=40 Identities=10% Similarity=0.055 Sum_probs=29.1
Q ss_pred CCCCHHHHHHHHhcCC--CCcEEEccCCCCCCC-----CCCceeeeeec
Q psy4109 1 MKKNAFYTNVARDREV--EGDLVLSDLGQGVPF-----RAGAFDGAISI 42 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~--~~~~~~~D~~~~lPf-----~~~sFD~v~s~ 42 (77)
+|.+|.+++.|++ .. ...++++|.. .++. ..+.||+|++.
T Consensus 50 iD~Dp~Ai~~A~~-L~~~rv~lv~~~f~-~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 50 LDQDPEAVARAKG-LHLPGLTVVQGNFR-HLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp EESCHHHHHHHHH-TCCTTEEEEESCGG-GHHHHHHHTTCSCEEEEEEE
T ss_pred EeCCHHHHHHHHh-hccCCEEEEECCcc-hHHHHHHHcCCCCcCEEEeC
Confidence 5999999999988 52 3578988874 4531 22579999963
No 286
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=47.20 E-value=2.5 Score=27.38 Aligned_cols=39 Identities=15% Similarity=0.130 Sum_probs=25.8
Q ss_pred EEEccCCCCCCCCC--CceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHHh
Q psy4109 20 LVLSDLGQGVPFRA--GAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACLW 74 (77)
Q Consensus 20 ~~~~D~~~~lPf~~--~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L~ 74 (77)
+++.|+-. |..+ ..||+|.+. .|+..|.+.+-+|.+..+
T Consensus 74 ~v~dDiF~--P~~~~Y~~~DLIYsi--------------rPP~El~~~i~~lA~~v~ 114 (153)
T 2k4m_A 74 IVRDDITS--PRMEIYRGAALIYSI--------------RPPAEIHSSLMRVADAVG 114 (153)
T ss_dssp EECCCSSS--CCHHHHTTEEEEEEE--------------SCCTTTHHHHHHHHHHHT
T ss_pred eEEccCCC--CcccccCCcCEEEEc--------------CCCHHHHHHHHHHHHHcC
Confidence 67777633 4443 478888877 456677777777776654
No 287
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=45.21 E-value=4 Score=27.73 Aligned_cols=27 Identities=11% Similarity=0.161 Sum_probs=20.2
Q ss_pred CcEEEccCCCCCC-CCCCceeeeeeccc
Q psy4109 18 GDLVLSDLGQGVP-FRAGAFDGAISISA 44 (77)
Q Consensus 18 ~~~~~~D~~~~lP-f~~~sFD~v~s~~~ 44 (77)
.++++||..+.++ +.+++||+|+++-=
T Consensus 22 ~~i~~gD~~~~l~~l~~~s~DlIvtdPP 49 (297)
T 2zig_A 22 HRLHVGDAREVLASFPEASVHLVVTSPP 49 (297)
T ss_dssp EEEEESCHHHHHTTSCTTCEEEEEECCC
T ss_pred CEEEECcHHHHHhhCCCCceeEEEECCC
Confidence 3689999754344 46789999999863
No 288
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=36.29 E-value=66 Score=18.93 Aligned_cols=14 Identities=7% Similarity=0.145 Sum_probs=11.0
Q ss_pred CCHHHHHHHHhcCC
Q psy4109 3 KNAFYTNVARDREV 16 (77)
Q Consensus 3 iS~~ML~~A~~r~~ 16 (77)
++|.+++.+++++.
T Consensus 40 ~~~~a~~~l~e~Gi 53 (124)
T 1y1l_A 40 VDETVKRLLAERGL 53 (124)
T ss_dssp CCHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHcCc
Confidence 57888888888874
No 289
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=31.58 E-value=31 Score=20.69 Aligned_cols=14 Identities=7% Similarity=0.140 Sum_probs=11.1
Q ss_pred CCHHHHHHHHhcCC
Q psy4109 3 KNAFYTNVARDREV 16 (77)
Q Consensus 3 iS~~ML~~A~~r~~ 16 (77)
++|.+++.++++|.
T Consensus 44 ~~p~a~~~l~~~Gi 57 (131)
T 1jf8_A 44 VNPKAIEAMKEVDI 57 (131)
T ss_dssp CCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCC
Confidence 57888888888874
No 290
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=30.21 E-value=9.1 Score=18.81 Aligned_cols=15 Identities=7% Similarity=0.377 Sum_probs=10.1
Q ss_pred ChHHHHHHHHHHHHH
Q psy4109 57 NPAKRLYKFFSSLFA 71 (77)
Q Consensus 57 ~p~~~l~~~~~~l~~ 71 (77)
.|.+.|-.+|++||.
T Consensus 3 dp~~~l~~~fk~iY~ 17 (35)
T 2jtt_C 3 GSSEGLMNVLKKIYE 17 (35)
T ss_dssp --CCSHHHHHHHHHT
T ss_pred ChhHHHHHHHHHHHh
Confidence 345567889999885
No 291
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=30.16 E-value=36 Score=21.12 Aligned_cols=14 Identities=7% Similarity=0.005 Sum_probs=11.1
Q ss_pred CCHHHHHHHHhcCC
Q psy4109 3 KNAFYTNVARDREV 16 (77)
Q Consensus 3 iS~~ML~~A~~r~~ 16 (77)
++|.+++.+++++.
T Consensus 62 ~dp~a~~vl~e~Gi 75 (148)
T 3rh0_A 62 LNQLSVESIAEVGA 75 (148)
T ss_dssp CCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCC
Confidence 67888888888873
No 292
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=29.45 E-value=42 Score=20.81 Aligned_cols=36 Identities=8% Similarity=0.014 Sum_probs=21.0
Q ss_pred CCHHHHHHHHhcCCCCcEEEccCCCCCC-CCCCceeeeeec
Q psy4109 3 KNAFYTNVARDREVEGDLVLSDLGQGVP-FRAGAFDGAISI 42 (77)
Q Consensus 3 iS~~ML~~A~~r~~~~~~~~~D~~~~lP-f~~~sFD~v~s~ 42 (77)
++|.+++.+++++.... ... ..+. ..-..||.|+++
T Consensus 54 ~~p~a~~~l~e~Gid~s-~~a---r~l~~~~~~~~DlIi~M 90 (161)
T 2cwd_A 54 MDPRARRVLEEEGAYFP-HVA---RRLTREDVLAYDHILVM 90 (161)
T ss_dssp CCHHHHHHHHHHTCCCC-CCC---CBCCHHHHHHCSEEEES
T ss_pred CCHHHHHHHHHcCcCcc-ccc---cCCCHhHhccCCEEEEC
Confidence 57888888888875433 211 2221 112357888777
No 293
>3p12_A D-ribose pyranase; carbohydrate metabolism, ISOM; 2.35A {Staphylococcus aureus} SCOP: c.133.1.0 PDB: 3p13_A*
Probab=27.46 E-value=1.1e+02 Score=19.17 Aligned_cols=41 Identities=17% Similarity=0.133 Sum_probs=23.8
Q ss_pred CCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeecc
Q psy4109 3 KNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISIS 43 (77)
Q Consensus 3 iS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~ 43 (77)
+|++.+..-.+=|-.-+++.+|++-+.|-.....|.+..-+
T Consensus 9 LnpeL~~~LA~mGHgD~ivIaDag~Pip~~~~~Idlal~~G 49 (144)
T 3p12_A 9 LNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKN 49 (144)
T ss_dssp CCHHHHHHHHTCCTTCEEEEECTTSCCCSSTTEEECCCBTT
T ss_pred cCHHHHHHHHhcCCCCEEEEccCCCCCCCCCcEEEeecCCC
Confidence 57777777666655557888997533332333444444333
No 294
>2fcg_F Cationic, antibacterial protein FALL-39, core peptide; HOST defense peptide, antimicrobial peptide, antimicrobial protein; NMR {Synthetic}
Probab=27.43 E-value=25 Score=16.13 Aligned_cols=12 Identities=25% Similarity=0.517 Sum_probs=9.0
Q ss_pred hHHHHHHHHHHH
Q psy4109 58 PAKRLYKFFSSL 69 (77)
Q Consensus 58 p~~~l~~~~~~l 69 (77)
.-++|+.||++|
T Consensus 8 IgQkIkdFf~~l 19 (26)
T 2fcg_F 8 IVQRIKDFLRNL 19 (26)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 346899998875
No 295
>1njr_A 32.1 kDa protein in ADH3-RCA1 intergenic region; structural genomics, dimer, two domain organization, PSI, PR structure initiative; HET: XYL; 1.90A {Saccharomyces cerevisiae} SCOP: c.50.1.2 PDB: 1txz_A* 1ty8_A*
Probab=25.56 E-value=20 Score=24.94 Aligned_cols=60 Identities=17% Similarity=0.136 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHhcC--------CCCcEEEccCCCCC--------CCCCCceeeeeeccchhhhcccCCCCCChHHHHHH
Q psy4109 1 MKKNAFYTNVARDRE--------VEGDLVLSDLGQGV--------PFRAGAFDGAISISALQWLCNADKTSHNPAKRLYK 64 (77)
Q Consensus 1 iDiS~~ML~~A~~r~--------~~~~~~~~D~~~~l--------Pf~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~ 64 (77)
+|+.+++++.-++.. ...++++||+. .+ |--++.+|+||+..= .++ ..+..+...+.+
T Consensus 22 ~d~~~~~v~a~~~~~~~~~~~~~~~i~i~~GDIt-~l~~~~~~~~~~~~~~vDAIVNaAN-s~l----~~gGGVd~AI~r 95 (284)
T 1njr_A 22 CDTNEVVTNLWQESIPHAYIQNDKYLCIHHGHLQ-SLMDSMRKGDAIHHGHSYAIVSPGN-SYG----YLGGGFDKALYN 95 (284)
T ss_dssp EESCHHHHHHHHHHCC-------CCEEEEESCHH-HHHHHHHTTCC----CCEEEEECCB-TTC----CCCSSHHHHHHH
T ss_pred ECCCHHHHHHHHHHhhhhcCCCCCEEEEEeCCHh-hhhhhccccccccCCCccEEEeCCC-CCC----CCCchHHHHHHH
Confidence 367788887543322 23588999985 45 334457999998641 111 224567777777
Q ss_pred HH
Q psy4109 65 FF 66 (77)
Q Consensus 65 ~~ 66 (77)
.+
T Consensus 96 aa 97 (284)
T 1njr_A 96 YF 97 (284)
T ss_dssp HH
T ss_pred hh
Confidence 76
No 296
>1rij_A E6APN1 peptide; Trp-CAGE, E6-binding domain, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.32.1.1
Probab=25.45 E-value=13 Score=16.81 Aligned_cols=13 Identities=38% Similarity=0.782 Sum_probs=8.7
Q ss_pred hhhcccCCCCCCh
Q psy4109 46 QWLCNADKTSHNP 58 (77)
Q Consensus 46 ~w~~d~~~~~~~p 58 (77)
||+.|-.+++..|
T Consensus 8 qwlkdggpssgrp 20 (26)
T 1rij_A 8 QWLKDGGPSSGRP 20 (26)
T ss_dssp HHHHTTGGGSSSC
T ss_pred HHHHcCCCCCCCC
Confidence 8998866655444
No 297
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=24.09 E-value=6.5 Score=34.65 Aligned_cols=46 Identities=17% Similarity=0.058 Sum_probs=20.5
Q ss_pred CCCHHHHHHHHhcCCCCcEEE--ccCCCCCCCCCCceeeeeeccchhh
Q psy4109 2 KKNAFYTNVARDREVEGDLVL--SDLGQGVPFRAGAFDGAISISALQW 47 (77)
Q Consensus 2 DiS~~ML~~A~~r~~~~~~~~--~D~~~~lPf~~~sFD~v~s~~~l~w 47 (77)
|+|++..+.|+++......-. -|...+-||.+++||.|++..++|=
T Consensus 1276 d~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~vl~~ 1323 (2512)
T 2vz8_A 1276 DRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCALAT 1323 (2512)
T ss_dssp CSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC---
T ss_pred cCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcccccc
Confidence 566666666665532111111 1331112567788999999988763
No 298
>3dsa_A D-ribose high-affinity transport system; D-ribose transport system, RBSD, decamer, csgid, transport protein, structural genomics; 2.45A {Salmonella typhimurium} PDB: 3e7n_A
Probab=23.49 E-value=1.2e+02 Score=18.79 Aligned_cols=39 Identities=23% Similarity=0.288 Sum_probs=24.5
Q ss_pred CCHHHHHHHHhcCCCCcEEEccCCCCCCCCCC--ceeeeeecc
Q psy4109 3 KNAFYTNVARDREVEGDLVLSDLGQGVPFRAG--AFDGAISIS 43 (77)
Q Consensus 3 iS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~--sFD~v~s~~ 43 (77)
+|++.+..-.+=|-.-+++.+|++ +|.+++ ..|.+...+
T Consensus 10 LnpeL~~~La~mGHgD~ivIaDag--~P~p~~~~~idla~~~g 50 (142)
T 3dsa_A 10 LNSEISSVISRLGHTDTLVVCDAG--LPIPNSTARIDMALTQG 50 (142)
T ss_dssp CCHHHHHHHHHCCTTCEEEEECTT--CCCCTTSEEEECCCBTT
T ss_pred CCHHHHHHHHhcCCCCEEEecCCC--CCCCCCCcEEEcccCCC
Confidence 578888777666655678889974 565443 344333333
No 299
>1ogd_A High affinity ribose transport protein RBSD; sugar transport; HET: RIP; 1.95A {Bacillus subtilis} SCOP: c.133.1.1 PDB: 1ogc_A* 1oge_A* 1ogf_A
Probab=23.17 E-value=1.3e+02 Score=18.47 Aligned_cols=30 Identities=23% Similarity=0.453 Sum_probs=21.7
Q ss_pred CCHHHHHHHHhcCCCCcEEEccCCCCCCCCCC
Q psy4109 3 KNAFYTNVARDREVEGDLVLSDLGQGVPFRAG 34 (77)
Q Consensus 3 iS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~ 34 (77)
+|++.+..-.+=|-.-.++.+|++ +|..++
T Consensus 7 Ln~eL~~~La~mGH~D~ivIaDag--~P~p~~ 36 (131)
T 1ogd_A 7 LNSHLAKILADLGHTDKIVIADAG--LPVPDG 36 (131)
T ss_dssp SCHHHHHHHHHCCTTCEEEEECTT--CCCCTT
T ss_pred CCHHHHHHHHHCCCCCeEEEecCC--CCCCCC
Confidence 578888877666655678999974 666554
No 300
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=22.87 E-value=1.4e+02 Score=18.16 Aligned_cols=37 Identities=14% Similarity=0.002 Sum_probs=20.6
Q ss_pred CCHHHHHHHHhcCCCCcEEEccCCCCCC-CCCCceeeeeec
Q psy4109 3 KNAFYTNVARDREVEGDLVLSDLGQGVP-FRAGAFDGAISI 42 (77)
Q Consensus 3 iS~~ML~~A~~r~~~~~~~~~D~~~~lP-f~~~sFD~v~s~ 42 (77)
++|.+++.+++++....-.. +.++. +.-..||.|+.+
T Consensus 51 ~~p~a~~~l~e~Gid~~~~~---ar~l~~~~~~~~DlIi~m 88 (150)
T 2wmy_A 51 ADESAIRVAEKNGLCLKGHR---GTKFTSALARQYDLLLVM 88 (150)
T ss_dssp CCHHHHHHHHHTTCCCTTCC---CCBCCHHHHTTCSEEEES
T ss_pred CCHHHHHHHHHcCCCccCCc---ccCCCHHHhccCCEEEEc
Confidence 67888999999884321000 11111 123458888876
No 301
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=22.43 E-value=69 Score=23.70 Aligned_cols=44 Identities=7% Similarity=-0.004 Sum_probs=29.7
Q ss_pred CCCCHHHHHHHHhcC----C-CCcEEEccCCCCCCCC----CCceeeeeeccch
Q psy4109 1 MKKNAFYTNVARDRE----V-EGDLVLSDLGQGVPFR----AGAFDGAISISAL 45 (77)
Q Consensus 1 iDiS~~ML~~A~~r~----~-~~~~~~~D~~~~lPf~----~~sFD~v~s~~~l 45 (77)
+|+.+.|..+|+.+. . ...+..+|.. ..|+. ...||.|++|.=+
T Consensus 260 ~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL-~~~~~~~~~~~~fD~Il~NPPf 312 (530)
T 3ufb_A 260 GEAKSLPYLLVQMNLLLHGLEYPRIDPENSL-RFPLREMGDKDRVDVILTNPPF 312 (530)
T ss_dssp ECCSHHHHHHHHHHHHHHTCSCCEEECSCTT-CSCGGGCCGGGCBSEEEECCCS
T ss_pred hhccHHHHHHHHHHHHhcCCccccccccccc-cCchhhhcccccceEEEecCCC
Confidence 378899999998763 2 3467777742 34432 3579999999744
No 302
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=22.38 E-value=23 Score=24.39 Aligned_cols=36 Identities=6% Similarity=-0.115 Sum_probs=24.3
Q ss_pred HHHHHHhcC-------CCCcEEEccCCCCCC-CCCCceeeeeec
Q psy4109 7 YTNVARDRE-------VEGDLVLSDLGQGVP-FRAGAFDGAISI 42 (77)
Q Consensus 7 ML~~A~~r~-------~~~~~~~~D~~~~lP-f~~~sFD~v~s~ 42 (77)
+++.++++. ...+++.||+.+.+| +.+++||.|+-=
T Consensus 173 ~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfID 216 (282)
T 2wk1_A 173 SEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMD 216 (282)
T ss_dssp CHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEEC
T ss_pred HHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEc
Confidence 455666542 236899999877777 346789988754
No 303
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=20.74 E-value=1.2e+02 Score=22.08 Aligned_cols=66 Identities=15% Similarity=0.154 Sum_probs=33.1
Q ss_pred HHHHHHHhcCCCCcEEEccCCCCCC-CCCCceeeeeeccchhhhcccCCCCCChHHHHHHHHHHHHHHH
Q psy4109 6 FYTNVARDREVEGDLVLSDLGQGVP-FRAGAFDGAISISALQWLCNADKTSHNPAKRLYKFFSSLFACL 73 (77)
Q Consensus 6 ~ML~~A~~r~~~~~~~~~D~~~~lP-f~~~sFD~v~s~~~l~w~~d~~~~~~~p~~~l~~~~~~l~~~L 73 (77)
+..+.|++.+.+.-.+.|.++.... +.+..||++||+. ..-.+.+..-....+.|.+.-.++.+.+
T Consensus 310 gVa~~A~~~~vPviaiaG~~~~~~~~~~~~Gi~a~f~i~--~~~~~l~~al~~a~~~L~~~a~~i~r~~ 376 (383)
T 3cwc_A 310 GVANIAKRYNKPVIGIAGSLTADVSVVHEHGLDAVFSVI--YTICTLEDALKNASENVRMTARNVAATL 376 (383)
T ss_dssp HHHHHHHHTTCCEEEEEEECC--------CCCSEEEEEE--CCCTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEeCCCCCChHHHHhcCCcEEEEcC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677777666667776543222 3555699999974 2222222222234445555555555544
No 304
>3e7n_A D-ribose high-affinity transport system; D-ribose transport system, RBSD,csgid, structural genomics; 2.45A {Salmonella typhimurium}
Probab=20.27 E-value=1.6e+02 Score=18.18 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=21.6
Q ss_pred CCHHHHHHHHhcCCCCcEEEccCCCCCCCCCC
Q psy4109 3 KNAFYTNVARDREVEGDLVLSDLGQGVPFRAG 34 (77)
Q Consensus 3 iS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~ 34 (77)
+||+.+..-.+=|-.-.++.+|++ +|..++
T Consensus 10 LnpeLl~~La~mGHgD~ivIaDa~--fP~~~~ 39 (142)
T 3e7n_A 10 LNSEISSVISRLGHTDTLVVCDAG--LPIPNS 39 (142)
T ss_dssp CCHHHHHHHHHCCTTCEEEEECTT--CCCCTT
T ss_pred CCHHHHHHHHHcCCCCEEEEecCC--CCCCCC
Confidence 678888887766655678889974 666554
No 305
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=20.27 E-value=2.3e+02 Score=19.86 Aligned_cols=47 Identities=15% Similarity=-0.004 Sum_probs=33.3
Q ss_pred CCCCHHHHHHHHhcCCCCcEEEccCCCCCCC--------CCCceeeeeeccchhhh
Q psy4109 1 MKKNAFYTNVARDREVEGDLVLSDLGQGVPF--------RAGAFDGAISISALQWL 48 (77)
Q Consensus 1 iDiS~~ML~~A~~r~~~~~~~~~D~~~~lPf--------~~~sFD~v~s~~~l~w~ 48 (77)
+|+++...+..+.+.+...++++|+. .+.. ..+.+|+++...==|-+
T Consensus 30 vE~d~~a~~t~~~N~~~~~~~~~DI~-~~~~~~~~~~~~~~~~~D~i~ggpPCQ~f 84 (376)
T 3g7u_A 30 VEIDQHAINTHAINFPRSLHVQEDVS-LLNAEIIKGFFKNDMPIDGIIGGPPCQGF 84 (376)
T ss_dssp ECSCHHHHHHHHHHCTTSEEECCCGG-GCCHHHHHHHHCSCCCCCEEEECCCCCTT
T ss_pred EeCCHHHHHHHHHhCCCCceEecChh-hcCHHHHHhhcccCCCeeEEEecCCCCCc
Confidence 47888888888888777778889985 3421 34679999987643333
No 306
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=20.20 E-value=1.2e+02 Score=18.78 Aligned_cols=38 Identities=8% Similarity=0.079 Sum_probs=23.5
Q ss_pred CCHHHHHHHHhcCCCCcEEEccCCCCCCCCCCceeeeeeccc
Q psy4109 3 KNAFYTNVARDREVEGDLVLSDLGQGVPFRAGAFDGAISISA 44 (77)
Q Consensus 3 iS~~ML~~A~~r~~~~~~~~~D~~~~lPf~~~sFD~v~s~~~ 44 (77)
+++.+++.+++++....-.+ +.++.-.+ .||.|+.+--
T Consensus 55 ~~~~a~~~l~~~Gid~~~~~---ar~l~~~~-~~DlIi~Md~ 92 (158)
T 3rof_A 55 PHEGTQKILNKHNIPFDGMI---SELFEATD-DFDYIVAMDQ 92 (158)
T ss_dssp CCHHHHHHHHHTTCCCTTCC---CCBCCTTC-CCSEEEESSH
T ss_pred CCHHHHHHHHHcCCCcCCCc---ceECChhh-cCCEEEEcCH
Confidence 67889999999885432110 12233234 8999998753
Done!