Query psy4110
Match_columns 169
No_of_seqs 183 out of 1108
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 17:16:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4110.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4110hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 8.7E-43 3E-47 304.8 14.5 146 5-155 417-565 (566)
2 3q9t_A Choline dehydrogenase a 100.0 1.4E-42 4.8E-47 304.1 15.1 146 6-158 425-575 (577)
3 3qvp_A Glucose oxidase; oxidor 100.0 6.9E-43 2.4E-47 306.3 12.8 149 5-157 428-580 (583)
4 1gpe_A Protein (glucose oxidas 100.0 2E-40 6.8E-45 290.9 12.4 150 6-159 433-586 (587)
5 2jbv_A Choline oxidase; alcoho 100.0 3.3E-40 1.1E-44 287.2 12.9 151 5-161 380-535 (546)
6 3t37_A Probable dehydrogenase; 100.0 6E-39 2.1E-43 276.1 13.8 141 5-154 379-522 (526)
7 1kdg_A CDH, cellobiose dehydro 100.0 1.4E-38 4.8E-43 276.2 13.0 143 4-158 402-545 (546)
8 1ju2_A HydroxynitrIle lyase; f 100.0 9.3E-38 3.2E-42 271.3 15.3 144 5-155 363-516 (536)
9 1n4w_A CHOD, cholesterol oxida 100.0 8.4E-32 2.9E-36 232.1 11.4 125 6-157 376-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 1.8E-31 6E-36 230.3 10.6 125 6-157 381-506 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 3.3E-28 1.1E-32 214.8 12.3 134 6-161 478-618 (623)
12 3hyw_A Sulfide-quinone reducta 87.0 0.97 3.3E-05 37.2 5.5 57 108-164 276-340 (430)
13 4g6h_A Rotenone-insensitive NA 81.2 1.9 6.3E-05 36.6 4.9 45 108-155 354-399 (502)
14 3f8d_A Thioredoxin reductase ( 75.5 4 0.00014 31.1 5.0 51 107-160 269-320 (323)
15 3sx6_A Sulfide-quinone reducta 75.2 7.1 0.00024 31.9 6.6 56 108-163 287-350 (437)
16 3h8l_A NADH oxidase; membrane 74.9 6.7 0.00023 31.6 6.4 49 107-158 288-337 (409)
17 2ywl_A Thioredoxin reductase r 64.3 16 0.00055 25.4 5.8 46 109-159 127-173 (180)
18 3h28_A Sulfide-quinone reducta 64.1 13 0.00046 30.1 6.0 54 107-160 275-336 (430)
19 4dgk_A Phytoene dehydrogenase; 63.9 5.7 0.00019 32.8 3.7 43 113-159 452-494 (501)
20 3vrd_B FCCB subunit, flavocyto 63.6 8.7 0.0003 30.7 4.7 49 108-159 275-326 (401)
21 1fl2_A Alkyl hydroperoxide red 53.5 21 0.00073 27.0 5.2 48 107-159 259-307 (310)
22 2zbw_A Thioredoxin reductase; 52.6 29 0.00099 26.5 5.9 52 107-161 269-321 (335)
23 3r9u_A Thioredoxin reductase; 50.6 21 0.00071 26.9 4.7 47 107-158 266-313 (315)
24 3lzw_A Ferredoxin--NADP reduct 50.2 32 0.0011 26.0 5.7 49 108-159 268-317 (332)
25 3ab1_A Ferredoxin--NADP reduct 43.8 35 0.0012 26.5 5.1 49 108-159 281-330 (360)
26 2q0l_A TRXR, thioredoxin reduc 43.4 35 0.0012 25.7 4.9 46 107-157 263-309 (311)
27 1y0p_A Fumarate reductase flav 39.3 62 0.0021 27.3 6.3 48 109-156 512-568 (571)
28 3cty_A Thioredoxin reductase; 38.2 56 0.0019 24.8 5.4 47 107-158 270-317 (319)
29 4a9w_A Monooxygenase; baeyer-v 37.0 38 0.0013 25.8 4.3 49 107-158 302-353 (357)
30 2q7v_A Thioredoxin reductase; 36.0 48 0.0016 25.2 4.7 47 107-158 266-313 (325)
31 1vdc_A NTR, NADPH dependent th 35.9 46 0.0016 25.3 4.6 46 108-157 277-323 (333)
32 1qo8_A Flavocytochrome C3 fuma 33.9 1.1E+02 0.0037 25.8 6.9 49 109-157 507-564 (566)
33 1trb_A Thioredoxin reductase; 32.9 73 0.0025 24.0 5.3 48 108-159 264-316 (320)
34 3fbs_A Oxidoreductase; structu 32.7 67 0.0023 23.7 5.0 46 108-159 248-294 (297)
35 1lqt_A FPRA; NADP+ derivative, 31.8 28 0.00096 28.8 2.8 47 108-158 341-388 (456)
36 3itj_A Thioredoxin reductase 1 28.6 94 0.0032 23.4 5.3 45 109-158 291-336 (338)
37 1d4d_A Flavocytochrome C fumar 28.2 1E+02 0.0036 26.0 5.9 41 117-157 526-570 (572)
38 4b0f_A C4B-binding protein alp 26.2 79 0.0027 19.1 3.4 24 26-49 25-48 (65)
39 2a87_A TRXR, TR, thioredoxin r 24.4 1.2E+02 0.004 23.2 5.1 45 108-156 270-315 (335)
40 1pxq_A Subtilisin A; thioether 24.3 21 0.00071 18.4 0.4 26 93-122 3-31 (35)
41 7cei_B Protein (colicin E7 imm 22.7 30 0.001 25.8 1.2 17 108-124 178-194 (206)
42 1cjc_A Protein (adrenodoxin re 21.8 56 0.0019 26.9 2.9 48 107-158 348-396 (460)
43 1hyu_A AHPF, alkyl hydroperoxi 21.7 1.3E+02 0.0044 25.1 5.2 45 107-156 470-515 (521)
44 1qey_A MNT-C, protein (regulat 21.4 45 0.0015 17.1 1.3 12 145-156 4-15 (31)
45 3ntd_A FAD-dependent pyridine 21.0 85 0.0029 26.2 3.9 47 107-154 285-337 (565)
46 3im4_C Dual specificity A kina 20.8 64 0.0022 17.9 2.0 16 141-156 14-29 (45)
47 2hwn_E A kinase binding peptid 20.5 74 0.0025 15.3 2.0 14 144-157 4-17 (26)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=8.7e-43 Score=304.85 Aligned_cols=146 Identities=32% Similarity=0.511 Sum_probs=131.8
Q ss_pred CCCCCCceEeeCCCC---CeeeecCCCCCHHHHHHHHHHHHHHHHHHhccccccccCCCcCCCCCCCcccccCChHHHHh
Q psy4110 5 SGKSSISHTWLKTRI---TLVGQPNYFQHRRDIETLIEGIRIAFNVSASAAFKKYNSRPLLTPMPGCAMFELFSDEYWEC 81 (169)
Q Consensus 5 ~~~~SrG~v~l~s~~---~P~Id~~yl~~~~D~~~l~~gi~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~sd~~~~~ 81 (169)
..|+|||+|+|++++ .|.|++|||++|.|++.++++++.+++++++++|+.+...+.. |++ ....+|++|++
T Consensus 417 ~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---P~~--~~~~sd~~~~~ 491 (566)
T 3fim_B 417 ISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWADFVIRPFD---PRL--RDPTDDAAIES 491 (566)
T ss_dssp SSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGGGTTTEEEESS---GGG--SCTTCHHHHHH
T ss_pred cCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcccCCccccccC---CCc--ccccchHHHHH
Confidence 578999999999974 6999999999999999999999999999999999888755442 331 13578999999
Q ss_pred hhhcccccccccCCCcccCCCCCCCCccCCCCcEeccCCcEEeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q psy4110 82 SLRHFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMIKED 155 (169)
Q Consensus 82 ~ir~~~~~~~H~~GTc~Mg~~~~~~~VVD~~~rV~Gv~nLrV~DaSv~P~~~~~np~~t~~~iaer~a~~I~~~ 155 (169)
|+|+...+.||++||||||++++..+|||++||||||+|||||||||||+++++||++|+||||||+|++|+++
T Consensus 492 ~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 492 YIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp HHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred HHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999998754349999999999999999999999999999999999999999999999975
No 2
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=1.4e-42 Score=304.13 Aligned_cols=146 Identities=30% Similarity=0.380 Sum_probs=133.5
Q ss_pred CCCCCc-eEeeCCCC---CeeeecCCCCCHHHHHHHHHHHHHHHHHH-hccccccccCCCcCCCCCCCcccccCChHHHH
Q psy4110 6 GKSSIS-HTWLKTRI---TLVGQPNYFQHRRDIETLIEGIRIAFNVS-ASAAFKKYNSRPLLTPMPGCAMFELFSDEYWE 80 (169)
Q Consensus 6 ~~~SrG-~v~l~s~~---~P~Id~~yl~~~~D~~~l~~gi~~~~~i~-~~~~~~~~~~~~~~~~~p~~~~~~~~sd~~~~ 80 (169)
.|+||| +|+|++++ +|.|+||||++|.|++.++++++++++++ ++++|+.+...+.. |+. ...+|++|+
T Consensus 425 ~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~---p~~---~~~sd~~~~ 498 (577)
T 3q9t_A 425 RPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRFSYDLLFKGEGFKDLVESEYP---WEM---PLDSDKEMH 498 (577)
T ss_dssp SCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHHHSTTGGGTEEEEES---SCC---CTTCHHHHH
T ss_pred eccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHHHHHHHHHHHhChhhhhccccccC---CCC---CcCCHHHHH
Confidence 589999 99999985 69999999999999999999999999999 89999988765442 332 357899999
Q ss_pred hhhhcccccccccCCCcccCCCCCCCCccCCCCcEeccCCcEEeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcc
Q psy4110 81 CSLRHFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGY 158 (169)
Q Consensus 81 ~~ir~~~~~~~H~~GTc~Mg~~~~~~~VVD~~~rV~Gv~nLrV~DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~ 158 (169)
+|+|+...+.||++||||||+++ .+||||++||||||+|||||||||||+++++||++|+||||||+|++|+++++.
T Consensus 499 ~~ir~~~~t~~H~~GTc~Mg~~~-~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~~~ 575 (577)
T 3q9t_A 499 RAVLDRCQTAFHPTGTARLSKNI-DQGVVDPKLKVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAEHKD 575 (577)
T ss_dssp HHHHHHCEECSCCBCTTCBCSST-TTCSBCTTCBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHhccccccccccceecCCCC-CCceECCCCeEeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999864 589999999999999999999999999999999999999999999999999864
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=6.9e-43 Score=306.32 Aligned_cols=149 Identities=28% Similarity=0.338 Sum_probs=134.7
Q ss_pred CCCCCCceEeeCCCC---Ceee-ecCCCCCHHHHHHHHHHHHHHHHHHhccccccccCCCcCCCCCCCcccccCChHHHH
Q psy4110 5 SGKSSISHTWLKTRI---TLVG-QPNYFQHRRDIETLIEGIRIAFNVSASAAFKKYNSRPLLTPMPGCAMFELFSDEYWE 80 (169)
Q Consensus 5 ~~~~SrG~v~l~s~~---~P~I-d~~yl~~~~D~~~l~~gi~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~sd~~~~ 80 (169)
..|+|||+|+|++.+ .|.| ++|||++|.|++.++++++++++|+++++|+.+...+. .|++......+|++|+
T Consensus 428 ~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~pg~~~~~~~sd~~~~ 504 (583)
T 3qvp_A 428 LLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNSGAMQTYFAGET---IPGDNLAYDADLSAWT 504 (583)
T ss_dssp SSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHHTSTTHHHHEEEEE---ESGGGSCTTCCHHHHH
T ss_pred cccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHhCcchhhcccccc---CCCcccccCCCHHHHH
Confidence 568999999999975 6999 99999999999999999999999999999988765433 3554322347899999
Q ss_pred hhhhcccccccccCCCcccCCCCCCCCccCCCCcEeccCCcEEeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc
Q psy4110 81 CSLRHFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMIKEDWG 157 (169)
Q Consensus 81 ~~ir~~~~~~~H~~GTc~Mg~~~~~~~VVD~~~rV~Gv~nLrV~DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~ 157 (169)
+|+|+...+.||++||||||+++ .++|||++||||||+|||||||||||+++++||++|+||||||+|++|++++.
T Consensus 505 ~~~r~~~~t~~H~~GTc~Mg~~~-~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~~~ 580 (583)
T 3qvp_A 505 EYIPYHFRPNYHGVGTCSMMPKE-MGGVVDNAARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYA 580 (583)
T ss_dssp HHGGGSCEECSCCBCTTCBSCGG-GTCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCCCcCCCCceeCCCCC-CCceECCCCeEecCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999864 58999999999999999999999999999999999999999999999999986
No 4
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=2e-40 Score=290.93 Aligned_cols=150 Identities=24% Similarity=0.319 Sum_probs=132.8
Q ss_pred CCCCCceEeeCCCC---Ce-eeecCCCCCHHHHHHHHHHHHHHHHHHhccccccccCCCcCCCCCCCcccccCChHHHHh
Q psy4110 6 GKSSISHTWLKTRI---TL-VGQPNYFQHRRDIETLIEGIRIAFNVSASAAFKKYNSRPLLTPMPGCAMFELFSDEYWEC 81 (169)
Q Consensus 6 ~~~SrG~v~l~s~~---~P-~Id~~yl~~~~D~~~l~~gi~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~sd~~~~~ 81 (169)
.++|||+|+|++++ .| .|++||+.+|.|++.++++++.+++++++.+++.+...+. .|+.......+|++|++
T Consensus 433 ~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~pg~~~~~~~sd~~~~~ 509 (587)
T 1gpe_A 433 IPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEYFAGET---LPGYNLVQNATLSQWSD 509 (587)
T ss_dssp SCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHHHHEEEEE---ESGGGSCTTCCHHHHHH
T ss_pred CCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchhhhccccc---CCCccccCCCCHHHHHH
Confidence 58999999999874 69 9999999999999999999999999999999888764432 23321112378999999
Q ss_pred hhhcccccccccCCCcccCCCCCCCCccCCCCcEeccCCcEEeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhccC
Q psy4110 82 SLRHFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGYV 159 (169)
Q Consensus 82 ~ir~~~~~~~H~~GTc~Mg~~~~~~~VVD~~~rV~Gv~nLrV~DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~~ 159 (169)
|+|+...+.+|++||||||++ +.+||||++|||||++||||||+||||+++++||++|+||||||+|++|++++++.
T Consensus 510 ~ir~~~~t~~H~~GTcrMG~~-~~~sVVD~~lrV~Gv~nLrVvDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~~~~~ 586 (587)
T 1gpe_A 510 YVLQNFRPNWHAVSSCSMMSR-ELGGVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYAKS 586 (587)
T ss_dssp HHHHSCEECSCCBCTTCBSCG-GGTCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCcccCccCccccCCC-CCCceECCCCEEECCCCcEEeeeccCCCCCCcchHHHHHHHHHHHHHHHHhhhhcC
Confidence 999999999999999999986 47899999999999999999999999999999999999999999999999988643
No 5
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=3.3e-40 Score=287.23 Aligned_cols=151 Identities=38% Similarity=0.579 Sum_probs=128.5
Q ss_pred CCCCCCceEeeCCCC---CeeeecCCCCCHH--HHHHHHHHHHHHHHHHhccccccccCCCcCCCCCCCcccccCChHHH
Q psy4110 5 SGKSSISHTWLKTRI---TLVGQPNYFQHRR--DIETLIEGIRIAFNVSASAAFKKYNSRPLLTPMPGCAMFELFSDEYW 79 (169)
Q Consensus 5 ~~~~SrG~v~l~s~~---~P~Id~~yl~~~~--D~~~l~~gi~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~sd~~~ 79 (169)
..++|||+|+|++++ .|.|+++|+++|. |++.++++++.+++++++.+++.+...+. .|++ ...+|++|
T Consensus 380 ~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~p~~---~~~sd~~~ 453 (546)
T 2jbv_A 380 THARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGREL---SPGV---EAQTDEEL 453 (546)
T ss_dssp TTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEEE---ESCT---TCCSHHHH
T ss_pred cccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhcccccc---cCCC---CCCCHHHH
Confidence 468999999999874 6999999999999 99999999999999999999887764433 2443 35789999
Q ss_pred HhhhhcccccccccCCCcccCCCCCCCCccCCCCcEeccCCcEEeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhccC
Q psy4110 80 ECSLRHFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGYV 159 (169)
Q Consensus 80 ~~~ir~~~~~~~H~~GTc~Mg~~~~~~~VVD~~~rV~Gv~nLrV~DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~~ 159 (169)
++|+|+...+.+|++||||||+..|+++|||++|||||++|||||||||||+++++||++|+||||||+|++|++++...
T Consensus 454 ~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~~~ 533 (546)
T 2jbv_A 454 QDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSARAGE 533 (546)
T ss_dssp HHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC-------
T ss_pred HHHHHhcCCcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHhhcccC
Confidence 99999999999999999999974468899999999999999999999999999999999999999999999999998655
Q ss_pred CC
Q psy4110 160 NT 161 (169)
Q Consensus 160 ~~ 161 (169)
.+
T Consensus 534 ~~ 535 (546)
T 2jbv_A 534 TT 535 (546)
T ss_dssp --
T ss_pred CC
Confidence 44
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=6e-39 Score=276.09 Aligned_cols=141 Identities=29% Similarity=0.422 Sum_probs=126.5
Q ss_pred CCCCCCceEeeCCC---CCeeeecCCCCCHHHHHHHHHHHHHHHHHHhccccccccCCCcCCCCCCCcccccCChHHHHh
Q psy4110 5 SGKSSISHTWLKTR---ITLVGQPNYFQHRRDIETLIEGIRIAFNVSASAAFKKYNSRPLLTPMPGCAMFELFSDEYWEC 81 (169)
Q Consensus 5 ~~~~SrG~v~l~s~---~~P~Id~~yl~~~~D~~~l~~gi~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~sd~~~~~ 81 (169)
..++|||+|++++. +.|.|+++|++++.|++.++++++.+++++++++++.+...+. .|++ ..+++++++
T Consensus 379 ~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~~---~pg~----~~~~~~~~~ 451 (526)
T 3t37_A 379 THPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWREREL---LPGT----PNSAAEMDD 451 (526)
T ss_dssp SSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEEC---SSCC----CCSHHHHHH
T ss_pred cCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhcccccc---CCCC----CCCHHHHHH
Confidence 35799999999986 4699999999999999999999999999999998888765543 3543 367899999
Q ss_pred hhhcccccccccCCCcccCCCCCCCCccCCCCcEeccCCcEEeeCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q psy4110 82 SLRHFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMIKE 154 (169)
Q Consensus 82 ~ir~~~~~~~H~~GTc~Mg~~~~~~~VVD~~~rV~Gv~nLrV~DaSv~P~~~~~np~~t~~~iaer~a~~I~~ 154 (169)
|+|+...+.||++||||||++ ++||||++|||||++|||||||||||+++++||++|+||||||+||.-..
T Consensus 452 ~ir~~~~t~~H~~GTcrMG~d--~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~~~ 522 (526)
T 3t37_A 452 FIARSVITHHHPCGTCRMGKD--PDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQYHH 522 (526)
T ss_dssp HHHHHEEECSCCBCTTCBCSS--TTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCccCcccCccccCCCC--CCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999974 57999999999999999999999999999999999999999999997543
No 7
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=1.4e-38 Score=276.23 Aligned_cols=143 Identities=22% Similarity=0.273 Sum_probs=124.3
Q ss_pred CCCCCCCceEeeCCCC-CeeeecCCCCCHHHHHHHHHHHHHHHHHHhccccccccCCCcCCCCCCCcccccCChHHHHhh
Q psy4110 4 NSGKSSISHTWLKTRI-TLVGQPNYFQHRRDIETLIEGIRIAFNVSASAAFKKYNSRPLLTPMPGCAMFELFSDEYWECS 82 (169)
Q Consensus 4 ~~~~~SrG~v~l~s~~-~P~Id~~yl~~~~D~~~l~~gi~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~sd~~~~~~ 82 (169)
..+++|||+|+|++++ +|.|+++|+.+|.|++.++++++.+++++++.+...+ ..|++ ..+++++++|
T Consensus 402 ~~p~~srG~v~L~s~~~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~----~~~~~~~~~~ 470 (546)
T 1kdg_A 402 STGIQSRGRIGIDAALRGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIPGLTM-------ITPDV----TQTLEEYVDA 470 (546)
T ss_dssp CTTCCCCBEEEECTTCCEEEEECCTTCSHHHHHHHHHHHHHHTTTGGGSTTCEE-------EESCT----TSCHHHHHHH
T ss_pred cCCCCCCceEecCCCCCCCcccccccCCchHHHHHHHHHHHHHHHhcCCCcccc-------cCCCC----CCCHHHHHHH
Confidence 3445899999999975 4679999999999999999999999999987642221 12332 3578889999
Q ss_pred hhcccccccccCCCcccCCCCCCCCccCCCCcEeccCCcEEeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcc
Q psy4110 83 LRHFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGY 158 (169)
Q Consensus 83 ir~~~~~~~H~~GTc~Mg~~~~~~~VVD~~~rV~Gv~nLrV~DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~ 158 (169)
++....+.+|++||||||++ ++++|||++|||||++|||||||||||+++++||++|+||||||+|++|++++..
T Consensus 471 ~~~~~~t~~H~~GTcrMG~~-~~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~~ 545 (546)
T 1kdg_A 471 YDPATMNSNHWVSSTTIGSS-PQSAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAGG 545 (546)
T ss_dssp SCGGGGCCSCCBCTTCBCSC-TTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHhcCcccccccceecCCC-CCCeeECCCCeEccCCCcEEeEecccCCCCCccHHHHHHHHHHHHHHHHHhhcCC
Confidence 99988899999999999986 5789999999999999999999999999999999999999999999999998753
No 8
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=9.3e-38 Score=271.31 Aligned_cols=144 Identities=23% Similarity=0.366 Sum_probs=123.1
Q ss_pred CCCCCCceEee-CCC---CCeeeecCCCCCHHHHHHHHHHHHHHHHHHhccccccccCCCcCCCCCCCcc------cccC
Q psy4110 5 SGKSSISHTWL-KTR---ITLVGQPNYFQHRRDIETLIEGIRIAFNVSASAAFKKYNSRPLLTPMPGCAM------FELF 74 (169)
Q Consensus 5 ~~~~SrG~v~l-~s~---~~P~Id~~yl~~~~D~~~l~~gi~~~~~i~~~~~~~~~~~~~~~~~~p~~~~------~~~~ 74 (169)
..++|||+|+| +++ +.|.|++||+++|.|++.++++++.+++++++++++.+...+.. +.|++.. ....
T Consensus 363 ~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~p~~~~~~~~~p~~~~ 441 (536)
T 1ju2_A 363 AGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLP-GVEGFNILGIPLPKDQT 441 (536)
T ss_dssp SSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCCS-TTCSCCBSSSCCCSCTT
T ss_pred CCCCcceEEEeCCCCCcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchhhhccccc-cCCCccccccCCCcccC
Confidence 35899999999 654 57999999999999999999999999999999999888755421 1122100 0245
Q ss_pred ChHHHHhhhhcccccccccCCCcccCCCCCCCCccCCCCcEeccCCcEEeeCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q psy4110 75 SDEYWECSLRHFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMIKE 154 (169)
Q Consensus 75 sd~~~~~~ir~~~~~~~H~~GTc~Mg~~~~~~~VVD~~~rV~Gv~nLrV~DaSv~P~~~~~np~~t~~~iaer~a~~I~~ 154 (169)
+|++|++|+|+...+.+|++|||||| +|||++|||||++|||||||||||+++++||++|+||||||+|+.|++
T Consensus 442 ~d~~~~~~ir~~~~t~~H~~GTcrMG------~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~ 515 (536)
T 1ju2_A 442 DDAAFETFCRESVASYWHYHGGCLVG------KVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQ 515 (536)
T ss_dssp CHHHHHHHHHHHCEECSCCEESSCBT------TTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhccCccccCcCccCCc------cEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999 499999999999999999999999999999999999999998876654
Q ss_pred h
Q psy4110 155 D 155 (169)
Q Consensus 155 ~ 155 (169)
+
T Consensus 516 ~ 516 (536)
T 1ju2_A 516 E 516 (536)
T ss_dssp H
T ss_pred h
Confidence 3
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=99.97 E-value=8.4e-32 Score=232.11 Aligned_cols=125 Identities=16% Similarity=0.181 Sum_probs=103.8
Q ss_pred CCCCCceEeeCCCCCeeeecCCCCCHHHHHHHHHHHH-HHHHHHhccccccccCCCcCCCCCCCcccccCChHHHHhhhh
Q psy4110 6 GKSSISHTWLKTRITLVGQPNYFQHRRDIETLIEGIR-IAFNVSASAAFKKYNSRPLLTPMPGCAMFELFSDEYWECSLR 84 (169)
Q Consensus 6 ~~~SrG~v~l~s~~~P~Id~~yl~~~~D~~~l~~gi~-~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~sd~~~~~~ir 84 (169)
.++|||+|+|++++ |.|+++|+.++ | +.++++++ .+++|+++.++ + ++.+ .. .++ ++++
T Consensus 376 ~p~srG~V~L~s~~-~~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~---------~~~~--~~-~~~-~~~~-- 435 (504)
T 1n4w_A 376 KNPQRGTFVYDAAT-DRAKLNWTRDQ-N-APAVNAAKALFDRINKANGT--I---------YRYD--LF-GTQ-LKAF-- 435 (504)
T ss_dssp CCCCCBCEEEETTT-TEEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--C---------BCCS--SS-SSS-CCSE--
T ss_pred ccCCCcEEEecCCC-CceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC--C---------cCCc--hh-hhh-hhhh--
Confidence 47999999999976 58999999999 9 78999999 88999987653 1 1110 00 000 1111
Q ss_pred cccccccccCCCcccCCCCCCCCccCCCCcEeccCCcEEeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc
Q psy4110 85 HFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMIKEDWG 157 (169)
Q Consensus 85 ~~~~~~~H~~GTc~Mg~~~~~~~VVD~~~rV~Gv~nLrV~DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~ 157 (169)
...+.+|++|||||| +|||++|||||++||||||+||||+++++||++|+||||||+|++|++++.
T Consensus 436 -~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 436 -ADDFCYHPLGGCVLG------KATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDV 501 (504)
T ss_dssp -ECSEESSCBCSSCTT------TTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC
T ss_pred -ccCccccccCCceee------eEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHHHHHhhc
Confidence 456789999999999 599999999999999999999999999999999999999999999999875
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=99.97 E-value=1.8e-31 Score=230.34 Aligned_cols=125 Identities=15% Similarity=0.079 Sum_probs=102.8
Q ss_pred CCCCCceEeeCCCCCeeeecCCCCCHHHHHHHHHHHH-HHHHHHhccccccccCCCcCCCCCCCcccccCChHHHHhhhh
Q psy4110 6 GKSSISHTWLKTRITLVGQPNYFQHRRDIETLIEGIR-IAFNVSASAAFKKYNSRPLLTPMPGCAMFELFSDEYWECSLR 84 (169)
Q Consensus 6 ~~~SrG~v~l~s~~~P~Id~~yl~~~~D~~~l~~gi~-~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~sd~~~~~~ir 84 (169)
.++|+|+|+|++++ |.|+++|+.++ | +.++++++ .+++++++.+. +...+ . ..+++ ++|
T Consensus 381 ~p~s~G~V~L~s~~-~~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~~~~----~-------~~~d~--~~~-- 440 (507)
T 1coy_A 381 KNPERARFQFNSGT-GKVDLTWAQSQ-N-QKGIDMAKKVFDKINQKEGT--IYRTD----L-------FGVYY--KTW-- 440 (507)
T ss_dssp CCCCCBCEEEETTT-TEEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CBCSS----C-------C--CC--CSS--
T ss_pred eeCCCcEEEEccCC-CceeeccCCCC-c-HHHHHHHHHHHHHHHhhcCC--cccCc----c-------cccch--hhh--
Confidence 47999999999975 49999999999 8 57888888 88999987652 11110 0 11222 334
Q ss_pred cccccccccCCCcccCCCCCCCCccCCCCcEeccCCcEEeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc
Q psy4110 85 HFTFTIYHPTSTCKMGPPTDPEAVVDPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMIKEDWG 157 (169)
Q Consensus 85 ~~~~~~~H~~GTc~Mg~~~~~~~VVD~~~rV~Gv~nLrV~DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~ 157 (169)
...+.+|++||||||. |||++|||||++||||||+||||+++++||++|+||||||+|++|+++.-
T Consensus 441 -~~~~~~H~~GTcrMG~------VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAeraAd~I~~~~~ 506 (507)
T 1coy_A 441 -GDDFTYHPLGGVLLNK------ATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSDI 506 (507)
T ss_dssp -BCSEESCCBCSSCTTT------TSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHTC
T ss_pred -cccccccccCCcchhh------eECCCCeEeccCCeEEeechhccCCCCcChHHHHHHHHHHHHHHHHHHhc
Confidence 4567899999999993 99999999999999999999999999999999999999999999998753
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=99.95 E-value=3.3e-28 Score=214.76 Aligned_cols=134 Identities=14% Similarity=0.124 Sum_probs=113.1
Q ss_pred CCCCCceEeeCCC-----CCeeeecCCCCCHH-HHHHHHHHHHHHHHHHhccccccccCCCcCCCCCCCcccccCChHHH
Q psy4110 6 GKSSISHTWLKTR-----ITLVGQPNYFQHRR-DIETLIEGIRIAFNVSASAAFKKYNSRPLLTPMPGCAMFELFSDEYW 79 (169)
Q Consensus 6 ~~~SrG~v~l~s~-----~~P~Id~~yl~~~~-D~~~l~~gi~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~sd~~~ 79 (169)
-+.++++|+|+++ +.|+++++|..++. |++.+.++++.+.+++++.+.+..... + .
T Consensus 478 ~p~~~n~v~L~~~~~D~~g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~------~-----~------- 539 (623)
T 3pl8_A 478 EPKEENKLWFSDKITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGSL------P-----Q------- 539 (623)
T ss_dssp CCCTTCEEEEEEEEECTTSSEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTSC------S-----E-------
T ss_pred ccCCCCEEEECCCCcCCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCch------h-----h-------
Confidence 4588999999873 57999999999999 999999999999999987553321110 0 0
Q ss_pred HhhhhcccccccccCCCcccCCCCCCCCcc-CCCCcEeccCCcEEeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcc
Q psy4110 80 ECSLRHFTFTIYHPTSTCKMGPPTDPEAVV-DPRLRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGY 158 (169)
Q Consensus 80 ~~~ir~~~~~~~H~~GTc~Mg~~~~~~~VV-D~~~rV~Gv~nLrV~DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~ 158 (169)
+ ....+++|++||||||++++++||| |++|||||++||||+|+|+||+.+++||++|+||+|+|+|+.|++++++
T Consensus 540 --~--~~~~~~~H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~~ 615 (623)
T 3pl8_A 540 --F--MEPGLVLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTP 615 (623)
T ss_dssp --E--CCTTTTCCCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCCC
T ss_pred --c--cCCCCcccCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhhc
Confidence 0 0124679999999999975678997 9999999999999999999999999999999999999999999999987
Q ss_pred CCC
Q psy4110 159 VNT 161 (169)
Q Consensus 159 ~~~ 161 (169)
.+.
T Consensus 616 ~~~ 618 (623)
T 3pl8_A 616 SPF 618 (623)
T ss_dssp CCC
T ss_pred CCC
Confidence 664
No 12
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=86.98 E-value=0.97 Score=37.23 Aligned_cols=57 Identities=16% Similarity=0.074 Sum_probs=43.1
Q ss_pred ccCCCCcEeccCCcEEe-eCCCCCCC-----CCCCC--hHHHHHHHHHHHHHHHHhhccCCCCCC
Q psy4110 108 VVDPRLRVYGVDGLRVI-DASIMPII-----VSGNP--NAPTIMIGEKGADMIKEDWGYVNTKPF 164 (169)
Q Consensus 108 VVD~~~rV~Gv~nLrV~-DaSv~P~~-----~~~np--~~t~~~iaer~a~~I~~~~~~~~~~~~ 164 (169)
+||+.+|+-+.+|+|.+ |.+-+|.. |...| .......|.-+|+.|+..++....+++
T Consensus 276 ~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~~~~ 340 (430)
T 3hyw_A 276 IVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYA 340 (430)
T ss_dssp CCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred EecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 68899999999999998 98888853 22333 235677889999999998866554443
No 13
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=81.15 E-value=1.9 Score=36.56 Aligned_cols=45 Identities=18% Similarity=0.113 Sum_probs=36.0
Q ss_pred ccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q psy4110 108 VVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKED 155 (169)
Q Consensus 108 VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~ 155 (169)
+||+.||+.+.+|+|++ |++..|.++. .-..+.-|+.+|+.|...
T Consensus 354 ~Vd~~lq~~~~~~IfAiGD~a~~~~p~~---a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 354 AVNDFLQVKGSNNIFAIGDNAFAGLPPT---AQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp EBCTTSBBTTCSSEEECGGGEESSSCCC---HHHHHHHHHHHHHHHHHH
T ss_pred eECCccccCCCCCEEEEEcccCCCCCCc---hHHHHHHHHHHHHHHHHH
Confidence 69999999999999998 9988886654 345677788888887653
No 14
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=75.52 E-value=4 Score=31.12 Aligned_cols=51 Identities=16% Similarity=0.048 Sum_probs=36.9
Q ss_pred CccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhccCC
Q psy4110 107 AVVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGYVN 160 (169)
Q Consensus 107 ~VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~~~ 160 (169)
=.||+.++. .++|+|++ |+.-.| +........+.-|..+|..|.+.+....
T Consensus 269 i~vd~~~~t-~~~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 320 (323)
T 3f8d_A 269 IKVDEWMRT-SVPGVFAAGDCTSAW--LGFRQVITAVAQGAVAATSAYRYVTEKK 320 (323)
T ss_dssp BCCCTTCBC-SSTTEEECSTTBSTT--TTCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EecCCCcee-cCCCEEEcceecCCC--CcccceeehhhHHHHHHHHHHHHHHHhh
Confidence 367888886 89999998 776665 3345566777778888888888775443
No 15
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=75.21 E-value=7.1 Score=31.92 Aligned_cols=56 Identities=18% Similarity=0.127 Sum_probs=41.1
Q ss_pred ccCCCCcEeccCCcEEe-eCCCCCCC-----CCCCC--hHHHHHHHHHHHHHHHHhhccCCCCC
Q psy4110 108 VVDPRLRVYGVDGLRVI-DASIMPII-----VSGNP--NAPTIMIGEKGADMIKEDWGYVNTKP 163 (169)
Q Consensus 108 VVD~~~rV~Gv~nLrV~-DaSv~P~~-----~~~np--~~t~~~iaer~a~~I~~~~~~~~~~~ 163 (169)
.||+.+|..+.+|+|++ |+.-+|.. +...| ....+.-|..+|+.|...+....-++
T Consensus 287 ~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~~ 350 (437)
T 3sx6_A 287 LVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQ 350 (437)
T ss_dssp CBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCCC
T ss_pred EeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 68888999899999998 87777642 11223 45567778899999999886655545
No 16
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=74.92 E-value=6.7 Score=31.57 Aligned_cols=49 Identities=18% Similarity=0.229 Sum_probs=36.7
Q ss_pred CccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcc
Q psy4110 107 AVVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGY 158 (169)
Q Consensus 107 ~VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~ 158 (169)
=.||+.+|+.+.+|++++ |+.-+|.. ........-|..+|+.|...++.
T Consensus 288 i~vd~~~~~~~~~~vfa~GD~~~~~~~---~~~~~A~~q~~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 288 IPTDLNMVSIKYDNVYAVGDANSMTVP---KLGYLAVMTGRIAAQHLANRLGV 337 (409)
T ss_dssp BCBBTTSBBSSCTTEEECGGGBTTCCS---CCHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEeCcccccCCCCCEEEeehhccCCCC---cHHHHHHHHHHHHHHHHHHHhcC
Confidence 378999999999999998 77766422 23455677788889999888833
No 17
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=64.29 E-value=16 Score=25.42 Aligned_cols=46 Identities=13% Similarity=-0.196 Sum_probs=33.2
Q ss_pred cCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhccC
Q psy4110 109 VDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGYV 159 (169)
Q Consensus 109 VD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~~ 159 (169)
||+.+|. .++|+|++ |..-.|. + .....+.-|..+|..|...++..
T Consensus 127 vd~~~~t-~~~~i~a~GD~~~~~~-~---~~~~A~~~g~~aa~~i~~~~~~~ 173 (180)
T 2ywl_A 127 TDEGGRT-SYPRVYAAGVARGKVP-G---HAIISAGDGAYVAVHLVSDLRGE 173 (180)
T ss_dssp CCTTCBC-SSTTEEECGGGGTCCS-C---CHHHHHHHHHHHHHHHHHHHHTS
T ss_pred eCCCCCc-CCCCEEEeecccCcch-h---hHHHHHHhHHHHHHHHHHHhhhc
Confidence 8899998 88999998 7665542 1 33455667888888888776543
No 18
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=64.10 E-value=13 Score=30.12 Aligned_cols=54 Identities=11% Similarity=0.014 Sum_probs=39.4
Q ss_pred CccCCCCcEeccCCcEEe-eCCCCCCC-----CC--CCChHHHHHHHHHHHHHHHHhhccCC
Q psy4110 107 AVVDPRLRVYGVDGLRVI-DASIMPII-----VS--GNPNAPTIMIGEKGADMIKEDWGYVN 160 (169)
Q Consensus 107 ~VVD~~~rV~Gv~nLrV~-DaSv~P~~-----~~--~np~~t~~~iaer~a~~I~~~~~~~~ 160 (169)
=.||+.+|..+.+|+|++ |+.-+|.. +. .......+.-|..+|+.|.+.+....
T Consensus 275 i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~ 336 (430)
T 3h28_A 275 VIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp BCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 368888998899999999 87776642 11 12345667778899999998886543
No 19
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=63.95 E-value=5.7 Score=32.80 Aligned_cols=43 Identities=19% Similarity=0.035 Sum_probs=25.1
Q ss_pred CcEeccCCcEEeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhccC
Q psy4110 113 LRVYGVDGLRVIDASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGYV 159 (169)
Q Consensus 113 ~rV~Gv~nLrV~DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~~ 159 (169)
.+.-.++|||.|-+|++|-. -...+++-|..+|+.|++++...
T Consensus 452 ~~~t~i~gLyl~G~~t~pG~----Gv~ga~~SG~~aA~~il~dL~gG 494 (501)
T 4dgk_A 452 NRDKTITNLYLVGAGTHPGA----GIPGVIGSAKATAGLMLEDLIGG 494 (501)
T ss_dssp ----CCTTEEECCCH----------HHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCCCCEEEECCCCCCcc----cHHHHHHHHHHHHHHHHHHhcCC
Confidence 34557899999999998831 12234445899999999998654
No 20
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=63.60 E-value=8.7 Score=30.71 Aligned_cols=49 Identities=20% Similarity=0.107 Sum_probs=35.8
Q ss_pred ccCCC-CcEeccCCcEEe-eC-CCCCCCCCCCChHHHHHHHHHHHHHHHHhhccC
Q psy4110 108 VVDPR-LRVYGVDGLRVI-DA-SIMPIIVSGNPNAPTIMIGEKGADMIKEDWGYV 159 (169)
Q Consensus 108 VVD~~-~rV~Gv~nLrV~-Da-Sv~P~~~~~np~~t~~~iaer~a~~I~~~~~~~ 159 (169)
.||+. +|.-+.+|+|.+ |. +..|.+. +....+.-|.-+|+.|...+.-+
T Consensus 275 ~VD~~tl~~t~~p~VfAiGDva~~~~~pk---~a~~A~~qa~v~A~ni~~~l~G~ 326 (401)
T 3vrd_B 275 PVDIRTFESSLQPGIHVIGDACNAAPMPK---SAYSANSQAKVAAAAVVALLKGE 326 (401)
T ss_dssp CBCTTTCBBSSSTTEEECGGGBCCTTSCB---SHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EECCCcceecCCCCEEEecccccCCCCCc---hHHHHHHHHHHHHHHHHHHhcCC
Confidence 68887 899999999999 75 3444322 23456777888999998887543
No 21
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=53.52 E-value=21 Score=26.98 Aligned_cols=48 Identities=15% Similarity=0.117 Sum_probs=34.8
Q ss_pred CccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhccC
Q psy4110 107 AVVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGYV 159 (169)
Q Consensus 107 ~VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~~ 159 (169)
=+||+.+| -.++|+|++ |+.-.|. ......+.-|..+|..|.+.+...
T Consensus 259 i~vd~~~~-t~~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~~~ 307 (310)
T 1fl2_A 259 IIIDAKCE-TNVKGVFAAGDCTTVPY----KQIIIATGEGAKASLSAFDYLIRT 307 (310)
T ss_dssp BCCCTTCB-CSSTTEEECSTTBSCSS----CCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EEcCCCCc-cCCCCEEEeecccCCcc----hhhhhhHhhHHHHHHHHHHHHHHh
Confidence 36888888 578999998 6665552 334566777888898888877543
No 22
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=52.61 E-value=29 Score=26.54 Aligned_cols=52 Identities=12% Similarity=-0.026 Sum_probs=34.8
Q ss_pred CccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhccCCC
Q psy4110 107 AVVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGYVNT 161 (169)
Q Consensus 107 ~VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~~~~ 161 (169)
=+||+.+|. .++|+|++ |+.-+|..+ ......+.-|..+|..|.+.+.....
T Consensus 269 i~vd~~~~t-~~~~vya~GD~~~~~~~~--~~~~~A~~~g~~aa~~i~~~l~~~~~ 321 (335)
T 2zbw_A 269 IKVDTTMAT-SIPGVYACGDIVTYPGKL--PLIVLGFGEAAIAANHAAAYANPALK 321 (335)
T ss_dssp EECCTTCBC-SSTTEEECSTTEECTTCC--CCHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred eeeCCCCCC-CCCCEEEeccccccCcch--hhhhhhHHHHHHHHHHHHHHhhhhhc
Confidence 367888884 78999998 776665321 22334455688888888887754433
No 23
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=50.61 E-value=21 Score=26.91 Aligned_cols=47 Identities=17% Similarity=-0.005 Sum_probs=33.8
Q ss_pred CccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcc
Q psy4110 107 AVVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGY 158 (169)
Q Consensus 107 ~VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~ 158 (169)
=.||+.+|. .++|+|++ |+.-.+ .......+.-|..+|..|.+.+..
T Consensus 266 i~vd~~~~t-~~~~v~a~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~~ 313 (315)
T 3r9u_A 266 VSVDLKMQT-SVAGLFAAGDLRKDA----PKQVICAAGDGAVAALSAMAYIES 313 (315)
T ss_dssp BCCCTTCBC-SSTTEEECGGGBTTC----CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCccc-CCCCEEEeecccCCc----hhhhhhHHhhHHHHHHHHHHHHHh
Confidence 478888997 89999998 664222 234556677788888888877643
No 24
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=50.22 E-value=32 Score=26.04 Aligned_cols=49 Identities=14% Similarity=0.031 Sum_probs=34.1
Q ss_pred ccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhccC
Q psy4110 108 VVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGYV 159 (169)
Q Consensus 108 VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~~ 159 (169)
.||+.+|. .++|+|++ |+.-+|.. .......+.-|..+|..|.+.+...
T Consensus 268 ~vd~~~~t-~~~~vya~GD~~~~~~~--~~~~~~A~~~g~~aa~~i~~~l~~~ 317 (332)
T 3lzw_A 268 VVKSTMET-NIEGFFAAGDICTYEGK--VNLIASGFGEAPTAVNNAKAYMDPK 317 (332)
T ss_dssp ECCTTSBC-SSTTEEECGGGEECTTC--CCCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred EeCCCCce-ecCCEEEccceecCCCC--cceEeeehhhHHHHHHHHHHhhChh
Confidence 67888886 89999998 66544422 1223445556888899888887654
No 25
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=43.78 E-value=35 Score=26.51 Aligned_cols=49 Identities=18% Similarity=0.073 Sum_probs=33.2
Q ss_pred ccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhccC
Q psy4110 108 VVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGYV 159 (169)
Q Consensus 108 VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~~ 159 (169)
+||+.+|. .++|+|++ |+.-+|.. .......+.-|..+|..|...+...
T Consensus 281 ~vd~~~~t-~~~~vya~GD~~~~~~~--~~~~~~A~~~g~~aa~~i~~~l~~~ 330 (360)
T 3ab1_A 281 VVDSHMKT-SVDGLYAAGDIAYYPGK--LKIIQTGLSEATMAVRHSLSYIKPG 330 (360)
T ss_dssp ECCTTSBC-SSTTEEECSTTEECTTC--CCSHHHHHHHHHHHHHHHHHHHSCC
T ss_pred eecCCCcC-CCCCEEEecCccCCCCc--cceeehhHHHHHHHHHHHHhhcCCc
Confidence 67888886 78999998 76655531 1223444556788888888776543
No 26
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=43.35 E-value=35 Score=25.74 Aligned_cols=46 Identities=22% Similarity=0.167 Sum_probs=31.8
Q ss_pred CccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc
Q psy4110 107 AVVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWG 157 (169)
Q Consensus 107 ~VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~ 157 (169)
=+||+.+|. .++|+|++ |+.-.| .......+.-|..+|..|.+.++
T Consensus 263 i~vd~~~~t-~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~ 309 (311)
T 2q0l_A 263 IVVDFSMKT-NVQGLFAAGDIRIFA----PKQVVCAASDGATAALSVISYLE 309 (311)
T ss_dssp BCCCTTCBC-SSTTEEECSTTBTTC----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCcccc-CCCCeEEcccccCcc----hHHHHHHHHhHHHHHHHHHHHHh
Confidence 468888886 78999998 665442 12244556668888888877654
No 27
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=39.28 E-value=62 Score=27.29 Aligned_cols=48 Identities=17% Similarity=0.207 Sum_probs=33.4
Q ss_pred cCCCCcEe-----ccCCcEEee---CCCCCC-CCCCCChHHHHHHHHHHHHHHHHhh
Q psy4110 109 VDPRLRVY-----GVDGLRVID---ASIMPI-IVSGNPNAPTIMIGEKGADMIKEDW 156 (169)
Q Consensus 109 VD~~~rV~-----Gv~nLrV~D---aSv~P~-~~~~np~~t~~~iaer~a~~I~~~~ 156 (169)
+|.++||. -++|||.+- ++++-. -+++|..+..+..|.++++.+.+..
T Consensus 512 id~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~~ 568 (571)
T 1y0p_A 512 IDTKAEVMNAKKQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKYS 568 (571)
T ss_dssp BCTTCEEECTTSCEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred ECCCceEECCCCCCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 55555552 389999983 345532 3467888888999999998887654
No 28
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=38.21 E-value=56 Score=24.75 Aligned_cols=47 Identities=28% Similarity=0.167 Sum_probs=32.9
Q ss_pred CccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcc
Q psy4110 107 AVVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGY 158 (169)
Q Consensus 107 ~VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~ 158 (169)
=+||+.+| -.++|+|++ |+.-.|. ......+.-|..+|..|.+.+..
T Consensus 270 i~vd~~~~-t~~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 270 IVVDSRQR-TSVPGVYAAGDVTSGNF----AQIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp BCCCTTCB-CSSTTEEECSTTBTTCC----CCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EeCCCCCc-cCCCCEEEeecccCcch----hhHHHHHHHHHHHHHHHHHHhhc
Confidence 36788877 478999998 6654431 23455667788889888887754
No 29
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=37.00 E-value=38 Score=25.80 Aligned_cols=49 Identities=10% Similarity=0.014 Sum_probs=33.2
Q ss_pred CccCCC-CcEeccCCcEEee-C-CCCCCCCCCCChHHHHHHHHHHHHHHHHhhcc
Q psy4110 107 AVVDPR-LRVYGVDGLRVID-A-SIMPIIVSGNPNAPTIMIGEKGADMIKEDWGY 158 (169)
Q Consensus 107 ~VVD~~-~rV~Gv~nLrV~D-a-Sv~P~~~~~np~~t~~~iaer~a~~I~~~~~~ 158 (169)
=+||+. ++.-+++|+|++- + -.-| ........+.-|..+|+.|.+.++.
T Consensus 302 i~vd~~~l~~t~~~~vya~Gd~d~~~~---~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 302 VEVDGSGLRALAVPSVWLLGYGDWNGM---ASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp BCBCTTSCBBSSCTTEEECSSCGGGST---TCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred ccccCCcccCCCCCCeEEecccccccc---chhhhhhhHHHHHHHHHHHHHHHHh
Confidence 367777 5778999999984 2 2222 1223344788899999999988865
No 30
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=36.02 E-value=48 Score=25.23 Aligned_cols=47 Identities=17% Similarity=0.070 Sum_probs=32.8
Q ss_pred CccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcc
Q psy4110 107 AVVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGY 158 (169)
Q Consensus 107 ~VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~ 158 (169)
=+||+.+|. .++|+|++ |+.-.| .......+.-|..+|..|...+..
T Consensus 266 i~vd~~~~t-~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~~ 313 (325)
T 2q7v_A 266 VDVRDEIYT-NIPMLFAAGDVSDYI----YRQLATSVGAGTRAAMMTERQLAA 313 (325)
T ss_dssp BCCBTTTBC-SSTTEEECSTTTCSS----CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCcc-CCCCEEEeecccCcc----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368888885 78999998 665443 123455667777888888776643
No 31
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=35.86 E-value=46 Score=25.32 Aligned_cols=46 Identities=15% Similarity=-0.015 Sum_probs=31.0
Q ss_pred ccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc
Q psy4110 108 VVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWG 157 (169)
Q Consensus 108 VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~ 157 (169)
+||+.++.-.++|+|++ |+.-.| .......+.-|..+|..|.+.+.
T Consensus 277 ~vd~~~~~t~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~ 323 (333)
T 1vdc_A 277 VTKPGTTQTSVPGVFAAGDVQDKK----YRQAITAAGTGCMAALDAEHYLQ 323 (333)
T ss_dssp CCCTTSCBCSSTTEEECGGGGCSS----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EechhhcccCCCCEEEeeeccCCC----chhHHHHHHhHHHHHHHHHHHHH
Confidence 56666545578999999 665544 12345566668888888877764
No 32
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=33.85 E-value=1.1e+02 Score=25.78 Aligned_cols=49 Identities=20% Similarity=0.253 Sum_probs=33.4
Q ss_pred cCCCCcEe-----ccCCcEEee---CCCCC-CCCCCCChHHHHHHHHHHHHHHHHhhc
Q psy4110 109 VDPRLRVY-----GVDGLRVID---ASIMP-IIVSGNPNAPTIMIGEKGADMIKEDWG 157 (169)
Q Consensus 109 VD~~~rV~-----Gv~nLrV~D---aSv~P-~~~~~np~~t~~~iaer~a~~I~~~~~ 157 (169)
||.++||. -++|||.+- ++++- .-+++|..+..+..|.++++.+.+..+
T Consensus 507 vd~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~~ 564 (566)
T 1qo8_A 507 INTTASVLDLQSKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHAL 564 (566)
T ss_dssp BCTTCEEEBTTSCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ECCCCeEECCCCCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Confidence 55555553 488999983 34543 234677788888889999988876543
No 33
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=32.87 E-value=73 Score=23.95 Aligned_cols=48 Identities=10% Similarity=-0.072 Sum_probs=32.6
Q ss_pred ccCCCC----cEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhccC
Q psy4110 108 VVDPRL----RVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGYV 159 (169)
Q Consensus 108 VVD~~~----rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~~ 159 (169)
+||+.+ +.-.++|+|++ |+.-.| .......+.-|..+|..|.+.+...
T Consensus 264 ~vd~~~~~~~~~t~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~~~ 316 (320)
T 1trb_A 264 KVQSGIHGNATQTSIPGVFAAGDVMDHI----YRQAITSAGTGCMAALDAERYLDGL 316 (320)
T ss_dssp CCCCSSSSCTTBCSSTTEEECGGGGCSS----SCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred EECCCcccccccCCCCCEEEcccccCCc----chhhhhhhccHHHHHHHHHHHHHhc
Confidence 467765 34568899998 665544 1234566777889999988887543
No 34
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=32.69 E-value=67 Score=23.70 Aligned_cols=46 Identities=15% Similarity=0.110 Sum_probs=32.9
Q ss_pred ccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhccC
Q psy4110 108 VVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGYV 159 (169)
Q Consensus 108 VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~~ 159 (169)
+||+.++ -.++|+|++ |+.-.| ......+.-|..+|..|.+.+...
T Consensus 248 ~vd~~~~-t~~~~vya~GD~~~~~-----~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 248 VTDPMKQ-TTARGIFACGDVARPA-----GSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp CCCTTCB-CSSTTEEECSGGGCTT-----CCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EeCCCCc-cCCCCEEEEeecCCch-----HHHHHHHHhHHHHHHHHHHHHhhh
Confidence 6777777 478999998 665543 345566777888888888877543
No 35
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=31.83 E-value=28 Score=28.76 Aligned_cols=47 Identities=15% Similarity=0.069 Sum_probs=33.6
Q ss_pred ccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcc
Q psy4110 108 VVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGY 158 (169)
Q Consensus 108 VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~ 158 (169)
+||..+||-+++|+|++ |..--|... ..+.+.-|..+|+.|.+++..
T Consensus 341 ~vn~~~rvt~~pgvya~GD~~~gp~~~----i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 341 IPNVGGRINGSPNEYVVGWIKRGPTGV----IGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp CCEETTEETTCSSEEECTHHHHCSCSC----TTHHHHHHHHHHHHHHHHHHH
T ss_pred eECCCCcCCCCCCEEEEeccCCCCchh----HHHHHHHHHHHHHHHHHHHHh
Confidence 67899999899999998 654334321 235677788888888777643
No 36
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=28.60 E-value=94 Score=23.37 Aligned_cols=45 Identities=13% Similarity=-0.105 Sum_probs=31.3
Q ss_pred cCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcc
Q psy4110 109 VDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGY 158 (169)
Q Consensus 109 VD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~ 158 (169)
+|..++ -.++|+|++ |+.-.+ .......+.-|..+|..|.+.+..
T Consensus 291 ~~~~~~-t~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 291 VPGSSL-TSVPGFFAAGDVQDSK----YRQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp CTTSSB-CSSTTEEECGGGGCSS----CCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCcccc-cCCCCEEEeeccCCCC----ccceeeehhhhHHHHHHHHHHHhc
Confidence 355555 488999999 555422 234567778889999999888764
No 37
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=28.22 E-value=1e+02 Score=26.03 Aligned_cols=41 Identities=12% Similarity=0.102 Sum_probs=29.8
Q ss_pred ccCCcEEee---CCCCC-CCCCCCChHHHHHHHHHHHHHHHHhhc
Q psy4110 117 GVDGLRVID---ASIMP-IIVSGNPNAPTIMIGEKGADMIKEDWG 157 (169)
Q Consensus 117 Gv~nLrV~D---aSv~P-~~~~~np~~t~~~iaer~a~~I~~~~~ 157 (169)
-++|||.+- ++++- .-+++|..+..+..|.++++.+.+..+
T Consensus 526 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~~ 570 (572)
T 1d4d_A 526 PITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKFAK 570 (572)
T ss_dssp EEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHHhh
Confidence 378999974 35552 234678888899999999998876543
No 38
>4b0f_A C4B-binding protein alpha chain; complement system, immune system; 2.80A {Homo sapiens}
Probab=26.20 E-value=79 Score=19.13 Aligned_cols=24 Identities=8% Similarity=0.347 Sum_probs=20.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHh
Q psy4110 26 NYFQHRRDIETLIEGIRIAFNVSA 49 (169)
Q Consensus 26 ~yl~~~~D~~~l~~gi~~~~~i~~ 49 (169)
..|.+|.|+....+-++...+|-.
T Consensus 25 qCLp~p~dVk~ALEvYKlsLEIe~ 48 (65)
T 4b0f_A 25 QCLPNPEDVKMALEVYKLSLEIEQ 48 (65)
T ss_dssp TSSSSHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCHHHHhHHhheeechhhHHH
Confidence 478899999999999998877643
No 39
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=24.43 E-value=1.2e+02 Score=23.15 Aligned_cols=45 Identities=13% Similarity=-0.052 Sum_probs=27.7
Q ss_pred ccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy4110 108 VVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDW 156 (169)
Q Consensus 108 VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~ 156 (169)
+||+.++.-..+|+|++ |+.-.| .......+.-|..+|..|.+.+
T Consensus 270 ~vd~~~~~t~~~~iya~GD~~~~~----~~~~~~A~~~g~~aA~~i~~~l 315 (335)
T 2a87_A 270 LVQGRTTSTSLPGVFAAGDLVDRT----YRQAVTAAGSGCAAAIDAERWL 315 (335)
T ss_dssp CCSTTSSBCSSTTEEECGGGTCCS----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCccCCCCEEEeeecCCcc----HHHHHHHHHhHHHHHHHHHHHh
Confidence 56665555678999998 665443 1233445555667777666544
No 40
>1pxq_A Subtilisin A; thioether bridge, cyclic peptide, bacteriocin, antimicrobial; HET: 2TL DPN; NMR {Bacillus subtilis} SCOP: j.5.1.2
Probab=24.31 E-value=21 Score=18.39 Aligned_cols=26 Identities=35% Similarity=0.749 Sum_probs=16.4
Q ss_pred cCCCcccCCCCCCCCccC---CCCcEeccCCcE
Q psy4110 93 PTSTCKMGPPTDPEAVVD---PRLRVYGVDGLR 122 (169)
Q Consensus 93 ~~GTc~Mg~~~~~~~VVD---~~~rV~Gv~nLr 122 (169)
.+.+|.+|.. ..+| +++.|-|..||+
T Consensus 3 ~ca~csigaa----cl~dgpipdfeva~~aglf 31 (35)
T 1pxq_A 3 GCATCSIGAA----CLVDGPIPDFEIAGAXGLF 31 (35)
T ss_dssp STTTTCSCCC----CCTTTTCCCSCCSCTTHHH
T ss_pred cceecccchh----hhccCCCCCchhhhhhhhc
Confidence 4668888863 3455 457777766653
No 41
>7cei_B Protein (colicin E7 immunity protein); DNAse, E-group colicins, protein-protein interaction, protei recognition, immune system; 2.30A {Escherichia coli str} SCOP: d.4.1.1
Probab=22.68 E-value=30 Score=25.77 Aligned_cols=17 Identities=24% Similarity=0.464 Sum_probs=13.6
Q ss_pred ccCCCCcEeccCCcEEe
Q psy4110 108 VVDPRLRVYGVDGLRVI 124 (169)
Q Consensus 108 VVD~~~rV~Gv~nLrV~ 124 (169)
-+..-|-||.++||+|+
T Consensus 178 ~I~~GG~VYDiDNLrI~ 194 (206)
T 7cei_B 178 PISQNGGVYDMDNISVV 194 (206)
T ss_dssp CSSSSCCSSBTTSEEEE
T ss_pred ccccCCeeecccceeec
Confidence 34555789999999996
No 42
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=21.75 E-value=56 Score=26.92 Aligned_cols=48 Identities=19% Similarity=0.057 Sum_probs=35.2
Q ss_pred CccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcc
Q psy4110 107 AVVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDWGY 158 (169)
Q Consensus 107 ~VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~~~ 158 (169)
=+||..+|+-+++|+|++ |..-.|. ....+.+.-|..+|+.|.+++..
T Consensus 348 i~vn~~~rt~~~p~vya~Gd~~~g~~----~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 348 VVPNMEGRVVDVPGLYCSGWVKRGPT----GVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp BCCEETTEETTCTTEEECTHHHHCTT----CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeECCCCcCcCCCCEEEEEeCCcCCC----ccHHHHHHHHHHHHHHHHHHHHh
Confidence 367999999889999998 6553332 12346788888889888888754
No 43
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=21.72 E-value=1.3e+02 Score=25.05 Aligned_cols=45 Identities=16% Similarity=0.185 Sum_probs=31.5
Q ss_pred CccCCCCcEeccCCcEEe-eCCCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy4110 107 AVVDPRLRVYGVDGLRVI-DASIMPIIVSGNPNAPTIMIGEKGADMIKEDW 156 (169)
Q Consensus 107 ~VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np~~t~~~iaer~a~~I~~~~ 156 (169)
=+||+.+|. .++|+|++ |+.-.|. ......+.-|..+|..|.+.+
T Consensus 470 I~Vd~~~~t-s~p~VfA~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~L 515 (521)
T 1hyu_A 470 IIIDAKCET-SVKGVFAAGDCTTVPY----KQIIIATGEGAKASLSAFDYL 515 (521)
T ss_dssp BCCCTTCBC-SSTTEEECSTTBCCSS----CCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCC-CCCCEEEeecccCCCc----ceeeehHHhHHHHHHHHHHHH
Confidence 368888886 78999998 7765552 234555666777887776655
No 44
>1qey_A MNT-C, protein (regulatory protein MNT); oligomerization, transcriptional control, P22 MNT repressor, gene regulation; NMR {Enterobacteria phage P22} SCOP: h.2.1.1
Probab=21.36 E-value=45 Score=17.06 Aligned_cols=12 Identities=33% Similarity=0.077 Sum_probs=6.7
Q ss_pred HHHHHHHHHHhh
Q psy4110 145 GEKGADMIKEDW 156 (169)
Q Consensus 145 aer~a~~I~~~~ 156 (169)
|||.|+.+.+..
T Consensus 4 aER~Ad~qse~v 15 (31)
T 1qey_A 4 AERLADEQSELV 15 (31)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 566666555443
No 45
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=20.99 E-value=85 Score=26.15 Aligned_cols=47 Identities=19% Similarity=0.213 Sum_probs=33.3
Q ss_pred CccCCCCcEeccCCcEEe-eCCCCCCCCCCCC-----hHHHHHHHHHHHHHHHH
Q psy4110 107 AVVDPRLRVYGVDGLRVI-DASIMPIIVSGNP-----NAPTIMIGEKGADMIKE 154 (169)
Q Consensus 107 ~VVD~~~rV~Gv~nLrV~-DaSv~P~~~~~np-----~~t~~~iaer~a~~I~~ 154 (169)
=+||+.+|. .++|+|.+ |..-+|....+.+ ....+.-|..+|+.|..
T Consensus 285 i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 337 (565)
T 3ntd_A 285 IKVNAMMQT-SDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFG 337 (565)
T ss_dssp BCCCTTCBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred EEECCCccc-CCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 368888887 78999998 8777776655543 33455667777777764
No 46
>3im4_C Dual specificity A kinase-anchoring protein 2; four-helix bundle, acetylation, CAMP, CAMP-binding, disulfide bond, nucleotide-binding; 2.29A {Homo sapiens} PDB: 3tmh_D
Probab=20.76 E-value=64 Score=17.91 Aligned_cols=16 Identities=31% Similarity=0.103 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHhh
Q psy4110 141 TIMIGEKGADMIKEDW 156 (169)
Q Consensus 141 ~~~iaer~a~~I~~~~ 156 (169)
=--+|.++|++|.++.
T Consensus 14 qEEMAWqIA~MIV~DV 29 (45)
T 3im4_C 14 QEELAWKIAKMIVSDV 29 (45)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3457899999998765
No 47
>2hwn_E A kinase binding peptide; PKA, AKAP, dimerization/docking, D/D, regulatory subunit, TR; 1.60A {Rattus norvegicus}
Probab=20.49 E-value=74 Score=15.32 Aligned_cols=14 Identities=36% Similarity=0.145 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHhhc
Q psy4110 144 IGEKGADMIKEDWG 157 (169)
Q Consensus 144 iaer~a~~I~~~~~ 157 (169)
+|.++|.+|..+..
T Consensus 4 mawkiakmiv~dvm 17 (26)
T 2hwn_E 4 LAWKIAKMIVSDVM 17 (26)
T ss_pred HHHHHHHHHHHHHH
Confidence 68899999988763
Done!