Query psy4112
Match_columns 284
No_of_seqs 278 out of 1699
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 17:18:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4112.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4112hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 5.6E-43 1.9E-47 347.7 14.3 199 54-283 2-215 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 5.7E-42 2E-46 341.4 18.2 204 52-284 17-235 (583)
3 3t37_A Probable dehydrogenase; 100.0 1.9E-38 6.5E-43 309.6 17.0 200 52-283 15-217 (526)
4 3q9t_A Choline dehydrogenase a 100.0 3.8E-38 1.3E-42 313.6 12.1 198 52-282 4-215 (577)
5 1gpe_A Protein (glucose oxidas 100.0 3.9E-37 1.3E-41 306.7 17.9 202 52-283 22-238 (587)
6 2jbv_A Choline oxidase; alcoho 100.0 1.8E-35 6.1E-40 292.4 18.0 200 53-283 12-216 (546)
7 1coy_A Cholesterol oxidase; ox 99.9 7.9E-28 2.7E-32 235.5 13.8 193 52-283 9-234 (507)
8 1n4w_A CHOD, cholesterol oxida 99.9 2.2E-27 7.4E-32 232.1 12.8 194 52-283 3-229 (504)
9 1ju2_A HydroxynitrIle lyase; f 99.9 7.4E-25 2.5E-29 216.0 9.7 173 52-283 24-202 (536)
10 1kdg_A CDH, cellobiose dehydro 99.9 4.7E-23 1.6E-27 202.8 13.5 187 52-283 5-203 (546)
11 3kkj_A Amine oxidase, flavin-c 98.4 1.7E-07 5.9E-12 78.6 5.0 36 54-90 2-37 (336)
12 3oz2_A Digeranylgeranylglycero 98.3 4.5E-07 1.6E-11 83.0 4.5 37 53-90 3-39 (397)
13 3pl8_A Pyranose 2-oxidase; sub 98.1 5.1E-06 1.7E-10 83.0 8.5 129 53-187 45-208 (623)
14 4fk1_A Putative thioredoxin re 98.0 4E-06 1.4E-10 75.3 4.5 36 52-88 4-39 (304)
15 3fpz_A Thiazole biosynthetic e 98.0 5.3E-06 1.8E-10 75.5 5.2 38 53-90 64-102 (326)
16 4gde_A UDP-galactopyranose mut 98.0 3.4E-06 1.2E-10 80.7 4.0 40 52-91 8-47 (513)
17 3dme_A Conserved exported prot 97.9 5.8E-06 2E-10 75.0 4.7 35 53-88 3-37 (369)
18 4a5l_A Thioredoxin reductase; 97.9 5.5E-06 1.9E-10 74.0 4.4 35 53-88 3-37 (314)
19 4gcm_A TRXR, thioredoxin reduc 97.9 6.1E-06 2.1E-10 74.1 4.4 34 54-88 6-39 (312)
20 2oln_A NIKD protein; flavoprot 97.9 7.9E-06 2.7E-10 75.8 4.6 36 53-89 3-38 (397)
21 3dje_A Fructosyl amine: oxygen 97.9 1.1E-05 3.9E-10 75.8 5.1 38 52-90 4-42 (438)
22 1ryi_A Glycine oxidase; flavop 97.8 1.2E-05 4E-10 74.0 5.0 37 52-89 15-51 (382)
23 2gag_B Heterotetrameric sarcos 97.8 1.2E-05 4E-10 74.4 5.0 41 47-88 14-56 (405)
24 2bcg_G Secretory pathway GDP d 97.8 1.4E-05 4.9E-10 76.3 5.3 38 52-90 9-46 (453)
25 3cgv_A Geranylgeranyl reductas 97.8 1.2E-05 3.9E-10 74.1 4.3 36 53-89 3-38 (397)
26 3k7m_X 6-hydroxy-L-nicotine ox 97.8 1.2E-05 4.2E-10 75.3 4.5 34 55-89 2-35 (431)
27 1c0p_A D-amino acid oxidase; a 97.8 1.7E-05 5.8E-10 72.7 5.1 36 52-88 4-39 (363)
28 3rp8_A Flavoprotein monooxygen 97.8 1.7E-05 5.8E-10 74.0 4.9 39 51-90 20-58 (407)
29 1y56_B Sarcosine oxidase; dehy 97.8 2.1E-05 7.1E-10 72.4 5.2 35 53-88 4-38 (382)
30 1yvv_A Amine oxidase, flavin-c 97.8 1.9E-05 6.6E-10 71.1 4.7 35 54-89 2-36 (336)
31 4at0_A 3-ketosteroid-delta4-5a 97.8 1.7E-05 5.6E-10 77.0 4.5 38 52-90 39-76 (510)
32 2uzz_A N-methyl-L-tryptophan o 97.7 1.5E-05 5.2E-10 72.9 4.0 35 54-89 2-36 (372)
33 2gf3_A MSOX, monomeric sarcosi 97.7 1.9E-05 6.6E-10 72.6 4.6 35 54-89 3-37 (389)
34 3nix_A Flavoprotein/dehydrogen 97.7 2E-05 7E-10 73.4 4.7 36 53-89 4-39 (421)
35 1rp0_A ARA6, thiazole biosynth 97.7 2.4E-05 8.3E-10 70.0 4.9 38 53-90 38-75 (284)
36 3ps9_A TRNA 5-methylaminomethy 97.7 2.9E-05 1E-09 77.8 5.6 38 50-88 268-305 (676)
37 3v76_A Flavoprotein; structura 97.7 2.5E-05 8.5E-10 74.2 4.8 39 51-90 24-62 (417)
38 3ka7_A Oxidoreductase; structu 97.7 2.4E-05 8.3E-10 73.0 4.5 35 55-90 1-35 (425)
39 1v0j_A UDP-galactopyranose mut 97.7 3E-05 1E-09 72.9 4.6 39 52-90 5-43 (399)
40 3da1_A Glycerol-3-phosphate de 97.7 3.2E-05 1.1E-09 76.2 4.9 35 53-88 17-51 (561)
41 3p1w_A Rabgdi protein; GDI RAB 97.6 3.5E-05 1.2E-09 74.7 5.1 39 51-90 17-55 (475)
42 2gqf_A Hypothetical protein HI 97.6 3E-05 1E-09 73.1 4.2 37 53-90 3-39 (401)
43 3atr_A Conserved archaeal prot 97.6 3.4E-05 1.2E-09 73.3 4.6 35 54-89 6-40 (453)
44 2cul_A Glucose-inhibited divis 97.6 4.1E-05 1.4E-09 66.4 4.7 34 54-88 3-36 (232)
45 1i8t_A UDP-galactopyranose mut 97.6 4.1E-05 1.4E-09 71.2 4.7 36 54-90 1-36 (367)
46 3nyc_A D-arginine dehydrogenas 97.6 4.1E-05 1.4E-09 69.9 4.4 36 52-89 7-42 (381)
47 3nrn_A Uncharacterized protein 97.6 4.6E-05 1.6E-09 71.4 4.7 34 56-90 2-35 (421)
48 2ivd_A PPO, PPOX, protoporphyr 97.6 4.6E-05 1.6E-09 72.4 4.7 39 51-90 13-51 (478)
49 4dgk_A Phytoene dehydrogenase; 97.6 3.4E-05 1.2E-09 73.7 3.8 35 55-90 2-36 (501)
50 2x3n_A Probable FAD-dependent 97.6 5.1E-05 1.7E-09 70.5 4.8 37 53-90 5-41 (399)
51 3pvc_A TRNA 5-methylaminomethy 97.6 5.6E-05 1.9E-09 76.0 5.5 37 52-89 262-298 (689)
52 2i0z_A NAD(FAD)-utilizing dehy 97.6 4.8E-05 1.7E-09 72.4 4.7 36 53-89 25-60 (447)
53 3jsk_A Cypbp37 protein; octame 97.6 4.3E-05 1.5E-09 71.1 4.3 37 54-90 79-116 (344)
54 3c4n_A Uncharacterized protein 97.6 3.8E-05 1.3E-09 71.9 3.9 37 53-89 35-72 (405)
55 2xdo_A TETX2 protein; tetracyc 97.6 6.5E-05 2.2E-09 70.0 5.4 37 52-89 24-60 (398)
56 2qcu_A Aerobic glycerol-3-phos 97.6 5.2E-05 1.8E-09 73.3 4.8 35 53-88 2-36 (501)
57 3nlc_A Uncharacterized protein 97.6 5.4E-05 1.8E-09 74.7 5.0 38 52-90 105-142 (549)
58 3c96_A Flavin-containing monoo 97.6 5.2E-05 1.8E-09 70.9 4.6 37 53-90 3-40 (410)
59 3lad_A Dihydrolipoamide dehydr 97.5 4.5E-05 1.5E-09 72.9 4.2 35 53-88 2-36 (476)
60 1k0i_A P-hydroxybenzoate hydro 97.5 4.6E-05 1.6E-09 70.5 4.1 35 54-89 2-36 (394)
61 2gmh_A Electron transfer flavo 97.5 4.3E-05 1.5E-09 75.6 4.1 36 54-90 35-76 (584)
62 2qa1_A PGAE, polyketide oxygen 97.5 6.5E-05 2.2E-09 72.8 5.3 39 51-90 8-46 (500)
63 3hdq_A UDP-galactopyranose mut 97.5 7E-05 2.4E-09 70.9 5.3 38 52-90 27-64 (397)
64 3e1t_A Halogenase; flavoprotei 97.5 5.4E-05 1.8E-09 73.3 4.5 36 53-89 6-41 (512)
65 1y0p_A Fumarate reductase flav 97.5 6.2E-05 2.1E-09 73.9 4.9 37 53-90 125-161 (571)
66 3alj_A 2-methyl-3-hydroxypyrid 97.5 6.9E-05 2.4E-09 69.2 4.9 37 53-90 10-46 (379)
67 2b9w_A Putative aminooxidase; 97.5 7.7E-05 2.6E-09 69.7 5.2 37 53-90 5-42 (424)
68 2rgh_A Alpha-glycerophosphate 97.5 6.6E-05 2.2E-09 74.1 5.0 35 53-88 31-65 (571)
69 2jae_A L-amino acid oxidase; o 97.5 7.6E-05 2.6E-09 71.2 5.2 39 51-90 8-46 (489)
70 1s3e_A Amine oxidase [flavin-c 97.5 6.8E-05 2.3E-09 72.4 4.8 37 53-90 3-39 (520)
71 1rsg_A FMS1 protein; FAD bindi 97.5 6.2E-05 2.1E-09 72.8 4.3 37 53-90 7-44 (516)
72 2vou_A 2,6-dihydroxypyridine h 97.5 8.4E-05 2.9E-09 69.2 5.1 36 53-89 4-39 (397)
73 1qo8_A Flavocytochrome C3 fuma 97.5 5.8E-05 2E-09 74.1 4.1 38 52-90 119-156 (566)
74 3i6d_A Protoporphyrinogen oxid 97.5 4.1E-05 1.4E-09 72.0 2.9 36 54-90 5-46 (470)
75 3o0h_A Glutathione reductase; 97.5 7.4E-05 2.5E-09 71.8 4.7 34 53-87 25-58 (484)
76 3qj4_A Renalase; FAD/NAD(P)-bi 97.5 7.2E-05 2.5E-09 68.0 4.3 35 55-89 2-38 (342)
77 3fbs_A Oxidoreductase; structu 97.5 8.4E-05 2.9E-09 65.3 4.5 34 54-88 2-35 (297)
78 3axb_A Putative oxidoreductase 97.5 4.9E-05 1.7E-09 71.8 3.2 33 53-86 22-55 (448)
79 3nks_A Protoporphyrinogen oxid 97.5 7.9E-05 2.7E-09 70.6 4.6 35 55-90 3-39 (477)
80 4a9w_A Monooxygenase; baeyer-v 97.5 8.3E-05 2.8E-09 66.9 4.5 35 54-89 3-37 (357)
81 2wdq_A Succinate dehydrogenase 97.5 7.5E-05 2.6E-09 74.0 4.5 36 53-89 6-41 (588)
82 2ywl_A Thioredoxin reductase r 97.5 9.8E-05 3.3E-09 60.9 4.5 33 55-88 2-34 (180)
83 3itj_A Thioredoxin reductase 1 97.4 7.9E-05 2.7E-09 66.7 4.2 36 52-88 20-55 (338)
84 2yg5_A Putrescine oxidase; oxi 97.4 8.8E-05 3E-09 69.9 4.6 37 53-90 4-40 (453)
85 3fmw_A Oxygenase; mithramycin, 97.4 9.3E-05 3.2E-09 73.1 4.9 37 53-90 48-84 (570)
86 2qa2_A CABE, polyketide oxygen 97.4 9.4E-05 3.2E-09 71.7 4.9 38 52-90 10-47 (499)
87 3cty_A Thioredoxin reductase; 97.4 0.0001 3.5E-09 66.1 4.8 35 52-87 14-48 (319)
88 3i3l_A Alkylhalidase CMLS; fla 97.4 0.00011 3.6E-09 73.0 5.3 37 52-89 21-57 (591)
89 1d5t_A Guanine nucleotide diss 97.4 0.00011 3.9E-09 69.6 5.3 38 52-90 4-41 (433)
90 3ihg_A RDME; flavoenzyme, anth 97.4 9.7E-05 3.3E-09 71.7 4.9 37 53-90 4-40 (535)
91 3ab1_A Ferredoxin--NADP reduct 97.4 0.0001 3.6E-09 67.2 4.8 37 52-89 12-48 (360)
92 3lzw_A Ferredoxin--NADP reduct 97.4 0.0001 3.5E-09 65.8 4.6 36 53-89 6-41 (332)
93 2q7v_A Thioredoxin reductase; 97.4 0.00011 3.8E-09 66.0 4.9 35 52-87 6-40 (325)
94 3g3e_A D-amino-acid oxidase; F 97.4 6.2E-05 2.1E-09 68.6 3.2 32 56-88 2-39 (351)
95 2zbw_A Thioredoxin reductase; 97.4 0.00011 3.9E-09 66.0 4.9 36 53-89 4-39 (335)
96 3f8d_A Thioredoxin reductase ( 97.4 9.8E-05 3.3E-09 65.5 4.4 34 53-87 14-47 (323)
97 4dna_A Probable glutathione re 97.4 0.0001 3.6E-09 70.2 4.8 33 54-87 5-37 (463)
98 1chu_A Protein (L-aspartate ox 97.4 9.5E-05 3.3E-09 72.5 4.6 36 53-90 7-42 (540)
99 2h88_A Succinate dehydrogenase 97.4 9.4E-05 3.2E-09 73.9 4.5 37 52-89 16-52 (621)
100 2bs2_A Quinol-fumarate reducta 97.4 0.0001 3.6E-09 74.1 4.8 36 53-89 4-39 (660)
101 3urh_A Dihydrolipoyl dehydroge 97.4 0.00011 3.8E-09 70.6 4.8 37 52-89 23-59 (491)
102 3ces_A MNMG, tRNA uridine 5-ca 97.4 0.0001 3.5E-09 73.9 4.6 35 53-88 27-61 (651)
103 2vvm_A Monoamine oxidase N; FA 97.4 0.00011 3.7E-09 70.3 4.6 35 55-90 40-74 (495)
104 3l8k_A Dihydrolipoyl dehydroge 97.4 0.00011 3.6E-09 70.3 4.5 36 53-89 3-38 (466)
105 1sez_A Protoporphyrinogen oxid 97.4 0.00013 4.4E-09 69.8 4.9 38 52-90 11-48 (504)
106 3ihm_A Styrene monooxygenase A 97.4 9.7E-05 3.3E-09 69.9 3.9 34 54-88 22-55 (430)
107 3ic9_A Dihydrolipoamide dehydr 97.4 0.00012 4.1E-09 70.7 4.6 34 54-88 8-41 (492)
108 2e1m_A L-glutamate oxidase; L- 97.4 0.00015 5.2E-09 68.1 5.2 35 52-87 42-76 (376)
109 2aqj_A Tryptophan halogenase, 97.3 0.00013 4.5E-09 71.0 4.7 36 53-89 4-42 (538)
110 3d1c_A Flavin-containing putat 97.3 0.00015 5.2E-09 66.0 4.8 35 53-88 3-38 (369)
111 3gyx_A Adenylylsulfate reducta 97.3 0.00011 3.6E-09 74.1 3.9 37 53-89 21-62 (662)
112 2r0c_A REBC; flavin adenine di 97.3 0.00014 4.8E-09 71.2 4.7 37 53-90 25-61 (549)
113 1pj5_A N,N-dimethylglycine oxi 97.3 0.00013 4.5E-09 74.8 4.7 36 53-89 3-39 (830)
114 2dkh_A 3-hydroxybenzoate hydro 97.3 0.00017 6E-09 71.9 5.4 38 52-90 30-68 (639)
115 2zxi_A TRNA uridine 5-carboxym 97.3 0.00013 4.5E-09 73.0 4.5 35 53-88 26-60 (637)
116 1jnr_A Adenylylsulfate reducta 97.3 0.00015 5E-09 72.6 4.8 37 53-89 21-60 (643)
117 2q0l_A TRXR, thioredoxin reduc 97.3 0.00015 5.2E-09 64.5 4.4 32 55-87 2-34 (311)
118 2gjc_A Thiazole biosynthetic e 97.3 0.00014 4.8E-09 67.2 4.3 38 53-90 64-102 (326)
119 3lov_A Protoporphyrinogen oxid 97.3 0.00013 4.6E-09 69.2 4.1 35 54-89 4-40 (475)
120 3dgz_A Thioredoxin reductase 2 97.3 0.00016 5.3E-09 69.6 4.5 34 52-86 4-37 (488)
121 2r9z_A Glutathione amide reduc 97.3 0.00017 5.7E-09 69.0 4.7 35 53-88 3-37 (463)
122 1ges_A Glutathione reductase; 97.3 0.00016 5.6E-09 68.8 4.6 35 53-88 3-37 (450)
123 4b1b_A TRXR, thioredoxin reduc 97.3 0.00016 5.5E-09 71.1 4.6 34 54-88 42-75 (542)
124 1mo9_A ORF3; nucleotide bindin 97.3 0.00023 7.9E-09 69.1 5.6 37 51-88 40-76 (523)
125 3dgh_A TRXR-1, thioredoxin red 97.3 0.00018 6.2E-09 68.9 4.8 34 52-86 7-40 (483)
126 2bry_A NEDD9 interacting prote 97.3 0.0002 6.9E-09 69.3 5.1 37 52-89 90-126 (497)
127 3qfa_A Thioredoxin reductase 1 97.3 0.0002 6.7E-09 69.6 5.1 37 51-88 29-65 (519)
128 3dk9_A Grase, GR, glutathione 97.3 0.00018 6E-09 68.9 4.6 36 52-88 18-53 (478)
129 4hb9_A Similarities with proba 97.3 0.00021 7.1E-09 65.6 4.8 34 56-90 3-36 (412)
130 3c4a_A Probable tryptophan hyd 97.3 0.00016 5.4E-09 67.0 4.0 35 56-90 2-37 (381)
131 2hqm_A GR, grase, glutathione 97.3 0.00018 6.3E-09 69.0 4.6 36 52-88 9-44 (479)
132 1kf6_A Fumarate reductase flav 97.3 0.00015 5E-09 72.1 4.0 36 53-89 4-41 (602)
133 2weu_A Tryptophan 5-halogenase 97.3 0.00011 3.8E-09 70.7 3.0 34 55-89 3-39 (511)
134 1fl2_A Alkyl hydroperoxide red 97.2 0.0002 6.9E-09 63.6 4.4 32 54-86 1-32 (310)
135 1trb_A Thioredoxin reductase; 97.2 0.00015 5.2E-09 64.6 3.6 34 53-87 4-37 (320)
136 2e5v_A L-aspartate oxidase; ar 97.2 0.00019 6.6E-09 69.0 4.5 31 56-87 1-31 (472)
137 2yqu_A 2-oxoglutarate dehydrog 97.2 0.0002 6.9E-09 68.0 4.6 35 54-89 1-35 (455)
138 1onf_A GR, grase, glutathione 97.2 0.00022 7.4E-09 68.9 4.8 34 54-88 2-35 (500)
139 1zk7_A HGII, reductase, mercur 97.2 0.00023 8E-09 67.8 5.0 35 53-88 3-37 (467)
140 3cp8_A TRNA uridine 5-carboxym 97.2 0.0002 6.7E-09 71.8 4.5 36 52-88 19-54 (641)
141 2bi7_A UDP-galactopyranose mut 97.2 0.00026 8.8E-09 66.2 5.0 36 54-90 3-38 (384)
142 1w4x_A Phenylacetone monooxyge 97.2 0.00025 8.5E-09 69.2 5.1 37 52-89 14-50 (542)
143 2qae_A Lipoamide, dihydrolipoy 97.2 0.00023 7.8E-09 67.9 4.7 35 54-89 2-36 (468)
144 1ojt_A Surface protein; redox- 97.2 0.00021 7.2E-09 68.5 4.4 37 52-89 4-40 (482)
145 3s5w_A L-ornithine 5-monooxyge 97.2 0.00016 5.3E-09 68.6 3.3 36 53-89 29-69 (463)
146 2e4g_A Tryptophan halogenase; 97.2 0.00024 8.1E-09 69.5 4.7 37 53-89 24-62 (550)
147 2gv8_A Monooxygenase; FMO, FAD 97.2 0.00032 1.1E-08 66.5 5.4 37 53-90 5-43 (447)
148 3r9u_A Thioredoxin reductase; 97.2 0.00018 6.1E-09 63.7 3.4 34 53-87 3-37 (315)
149 1v59_A Dihydrolipoamide dehydr 97.2 0.00026 8.8E-09 67.6 4.6 35 53-88 4-38 (478)
150 1zmd_A Dihydrolipoyl dehydroge 97.2 0.00024 8.4E-09 67.8 4.4 37 52-89 4-40 (474)
151 1vdc_A NTR, NADPH dependent th 97.2 0.00022 7.5E-09 64.0 3.8 33 53-86 7-39 (333)
152 1dxl_A Dihydrolipoamide dehydr 97.2 0.00025 8.5E-09 67.5 4.3 37 52-89 4-40 (470)
153 2pyx_A Tryptophan halogenase; 97.2 0.00023 7.9E-09 69.1 4.1 37 53-89 6-53 (526)
154 2a87_A TRXR, TR, thioredoxin r 97.2 0.00024 8.2E-09 64.3 3.9 35 52-87 12-46 (335)
155 2iid_A L-amino-acid oxidase; f 97.1 0.00029 1E-08 67.3 4.6 37 53-90 32-68 (498)
156 1ebd_A E3BD, dihydrolipoamide 97.1 0.00029 9.9E-09 66.9 4.4 33 54-87 3-35 (455)
157 2a8x_A Dihydrolipoyl dehydroge 97.1 0.00029 9.9E-09 67.1 4.4 33 54-87 3-35 (464)
158 4dsg_A UDP-galactopyranose mut 97.1 0.00039 1.3E-08 67.0 5.0 37 53-90 8-45 (484)
159 1xdi_A RV3303C-LPDA; reductase 97.1 0.00024 8.1E-09 68.5 3.4 35 54-88 2-38 (499)
160 1pn0_A Phenol 2-monooxygenase; 97.1 0.00036 1.2E-08 70.1 4.7 36 54-90 8-48 (665)
161 1vg0_A RAB proteins geranylger 97.1 0.00047 1.6E-08 69.2 5.3 40 51-91 5-44 (650)
162 1fec_A Trypanothione reductase 97.1 0.00034 1.2E-08 67.4 4.2 32 53-85 2-34 (490)
163 2eq6_A Pyruvate dehydrogenase 97.1 0.00039 1.3E-08 66.4 4.5 34 54-88 6-39 (464)
164 3uox_A Otemo; baeyer-villiger 97.0 0.00046 1.6E-08 67.7 5.0 37 52-89 7-43 (545)
165 1b37_A Protein (polyamine oxid 97.0 0.00042 1.4E-08 66.0 4.6 37 53-90 3-40 (472)
166 3gwf_A Cyclohexanone monooxyge 97.0 0.00044 1.5E-08 67.8 4.6 36 53-89 7-43 (540)
167 4ap3_A Steroid monooxygenase; 97.0 0.00046 1.6E-08 67.8 4.8 37 52-89 19-55 (549)
168 1lvl_A Dihydrolipoamide dehydr 97.0 0.0004 1.4E-08 66.2 3.9 35 53-88 4-38 (458)
169 3g5s_A Methylenetetrahydrofola 97.0 0.00056 1.9E-08 65.1 4.6 34 55-89 2-35 (443)
170 2wpf_A Trypanothione reductase 97.0 0.00047 1.6E-08 66.6 4.1 33 52-85 5-38 (495)
171 2x8g_A Thioredoxin glutathione 96.9 0.00061 2.1E-08 67.1 4.5 35 52-87 105-139 (598)
172 3k30_A Histamine dehydrogenase 96.9 0.00062 2.1E-08 68.4 4.7 39 51-90 388-426 (690)
173 1d4d_A Flavocytochrome C fumar 96.9 0.00068 2.3E-08 66.7 4.8 37 53-90 125-161 (572)
174 2vdc_G Glutamate synthase [NAD 96.8 0.00081 2.8E-08 64.5 4.7 38 52-90 120-157 (456)
175 2cdu_A NADPH oxidase; flavoenz 96.8 0.00069 2.4E-08 64.2 3.9 35 55-89 1-36 (452)
176 4gut_A Lysine-specific histone 96.8 0.00077 2.6E-08 69.0 4.2 38 52-90 334-371 (776)
177 1hyu_A AHPF, alkyl hydroperoxi 96.8 0.00095 3.3E-08 64.9 4.5 34 52-86 210-243 (521)
178 2v3a_A Rubredoxin reductase; a 96.8 0.0011 3.8E-08 61.3 4.8 35 53-88 3-39 (384)
179 1y56_A Hypothetical protein PH 96.8 0.00074 2.5E-08 65.1 3.7 35 54-90 108-142 (493)
180 3lxd_A FAD-dependent pyridine 96.7 0.0012 4.1E-08 61.8 4.9 38 52-90 7-46 (415)
181 1ps9_A 2,4-dienoyl-COA reducta 96.7 0.0016 5.4E-08 65.2 5.9 38 52-90 371-408 (671)
182 2xve_A Flavin-containing monoo 96.7 0.0011 3.8E-08 63.4 4.7 34 55-89 3-42 (464)
183 2z3y_A Lysine-specific histone 96.7 0.0014 4.8E-08 65.6 5.2 38 52-90 105-142 (662)
184 1m6i_A Programmed cell death p 96.7 0.0012 3.9E-08 63.8 4.4 40 51-90 8-48 (493)
185 1xhc_A NADH oxidase /nitrite r 96.7 0.0013 4.6E-08 60.8 4.7 35 54-90 8-42 (367)
186 1q1r_A Putidaredoxin reductase 96.6 0.0015 5.2E-08 61.7 4.9 35 54-89 4-40 (431)
187 3oc4_A Oxidoreductase, pyridin 96.6 0.0011 3.8E-08 62.9 3.8 36 55-90 3-39 (452)
188 1o94_A Tmadh, trimethylamine d 96.6 0.0018 6.1E-08 65.6 5.5 38 52-90 387-424 (729)
189 3kd9_A Coenzyme A disulfide re 96.6 0.0013 4.3E-08 62.3 4.2 37 54-90 3-40 (449)
190 3cgb_A Pyridine nucleotide-dis 96.6 0.0014 4.7E-08 62.8 4.2 37 54-90 36-73 (480)
191 3iwa_A FAD-dependent pyridine 96.6 0.0012 4E-08 63.0 3.6 37 54-90 3-40 (472)
192 2bc0_A NADH oxidase; flavoprot 96.6 0.001 3.6E-08 63.8 3.2 36 54-89 35-72 (490)
193 1nhp_A NADH peroxidase; oxidor 96.5 0.0014 4.9E-08 61.9 4.0 36 55-90 1-37 (447)
194 3h8l_A NADH oxidase; membrane 96.5 0.0015 5.2E-08 60.8 4.0 36 55-90 2-39 (409)
195 3ics_A Coenzyme A-disulfide re 96.5 0.0017 5.9E-08 63.6 4.3 39 52-90 34-73 (588)
196 3h28_A Sulfide-quinone reducta 96.5 0.0021 7.3E-08 60.4 4.7 36 55-90 3-39 (430)
197 2gag_A Heterotetrameric sarcos 96.4 0.0019 6.7E-08 67.5 4.6 37 53-90 127-163 (965)
198 3fg2_P Putative rubredoxin red 96.4 0.0028 9.4E-08 59.1 4.7 35 55-90 2-38 (404)
199 2xag_A Lysine-specific histone 96.3 0.0033 1.1E-07 65.0 5.6 38 52-90 276-313 (852)
200 2gqw_A Ferredoxin reductase; f 96.3 0.0025 8.7E-08 59.7 4.1 37 53-90 6-44 (408)
201 3sx6_A Sulfide-quinone reducta 96.3 0.0026 8.9E-08 60.0 4.1 37 54-90 4-42 (437)
202 3ntd_A FAD-dependent pyridine 96.1 0.0035 1.2E-07 60.9 4.0 36 55-90 2-38 (565)
203 1cjc_A Protein (adrenodoxin re 96.1 0.004 1.4E-07 59.6 4.2 38 53-90 5-43 (460)
204 1gte_A Dihydropyrimidine dehyd 96.0 0.0049 1.7E-07 64.8 4.8 36 53-89 186-222 (1025)
205 3klj_A NAD(FAD)-dependent dehy 96.0 0.0068 2.3E-07 56.6 5.2 39 51-90 6-44 (385)
206 3vrd_B FCCB subunit, flavocyto 95.9 0.0049 1.7E-07 57.0 4.1 34 56-89 4-38 (401)
207 1lqt_A FPRA; NADP+ derivative, 95.9 0.0036 1.2E-07 59.9 3.1 37 54-90 3-45 (456)
208 3ef6_A Toluene 1,2-dioxygenase 95.9 0.0066 2.2E-07 56.8 4.8 35 55-90 3-39 (410)
209 4b63_A L-ornithine N5 monooxyg 95.7 0.0028 9.6E-08 61.2 1.2 39 51-89 36-87 (501)
210 4g6h_A Rotenone-insensitive NA 95.6 0.0095 3.3E-07 57.6 4.9 38 51-89 39-76 (502)
211 4eqs_A Coenzyme A disulfide re 95.6 0.0069 2.3E-07 57.4 3.6 35 56-90 2-37 (437)
212 3ayj_A Pro-enzyme of L-phenyla 95.5 0.0061 2.1E-07 61.9 3.0 35 53-88 55-97 (721)
213 3hyw_A Sulfide-quinone reducta 95.2 0.012 4.2E-07 55.3 4.0 35 56-90 4-39 (430)
214 1nhp_A NADH peroxidase; oxidor 92.0 0.13 4.5E-06 48.2 4.7 36 54-90 149-184 (447)
215 3fwz_A Inner membrane protein 92.0 0.22 7.6E-06 39.1 5.3 34 55-89 8-41 (140)
216 4gcm_A TRXR, thioredoxin reduc 91.6 0.18 6.2E-06 44.5 4.8 34 56-90 147-180 (312)
217 3llv_A Exopolyphosphatase-rela 91.3 0.2 6.7E-06 39.1 4.3 32 56-88 8-39 (141)
218 1lss_A TRK system potassium up 91.0 0.23 8E-06 38.0 4.4 33 55-88 5-37 (140)
219 2g1u_A Hypothetical protein TM 90.7 0.25 8.5E-06 39.4 4.4 34 54-88 19-52 (155)
220 1id1_A Putative potassium chan 90.6 0.25 8.4E-06 39.3 4.3 32 55-87 4-35 (153)
221 3klj_A NAD(FAD)-dependent dehy 90.4 0.2 6.7E-06 46.5 4.1 35 55-90 147-181 (385)
222 2yqu_A 2-oxoglutarate dehydrog 90.1 0.26 9.1E-06 46.3 4.7 34 56-90 169-202 (455)
223 2eq6_A Pyruvate dehydrogenase 90.0 0.27 9.2E-06 46.5 4.7 34 56-90 171-204 (464)
224 1ebd_A E3BD, dihydrolipoamide 89.8 0.29 9.8E-06 46.0 4.7 35 55-90 171-205 (455)
225 1lvl_A Dihydrolipoamide dehydr 89.7 0.23 8E-06 46.8 4.0 34 56-90 173-206 (458)
226 2v3a_A Rubredoxin reductase; a 89.4 0.33 1.1E-05 44.4 4.7 35 55-90 146-180 (384)
227 1xhc_A NADH oxidase /nitrite r 89.4 0.28 9.7E-06 45.0 4.2 35 55-90 144-178 (367)
228 4a5l_A Thioredoxin reductase; 89.4 0.38 1.3E-05 42.1 4.9 35 55-90 153-187 (314)
229 1v59_A Dihydrolipoamide dehydr 88.8 0.38 1.3E-05 45.4 4.7 34 56-90 185-218 (478)
230 1ges_A Glutathione reductase; 88.2 0.44 1.5E-05 44.8 4.7 34 56-90 169-202 (450)
231 2gqw_A Ferredoxin reductase; f 88.0 0.47 1.6E-05 44.0 4.7 35 55-90 146-180 (408)
232 3c85_A Putative glutathione-re 87.8 0.38 1.3E-05 39.2 3.6 33 55-88 40-73 (183)
233 3d1c_A Flavin-containing putat 87.6 0.47 1.6E-05 42.5 4.4 34 56-90 168-201 (369)
234 2hmt_A YUAA protein; RCK, KTN, 87.5 0.49 1.7E-05 36.2 3.9 31 56-87 8-38 (144)
235 3cgb_A Pyridine nucleotide-dis 87.1 0.38 1.3E-05 45.6 3.6 35 55-90 187-221 (480)
236 2bc0_A NADH oxidase; flavoprot 86.9 0.57 1.9E-05 44.6 4.7 35 55-90 195-229 (490)
237 3l4b_C TRKA K+ channel protien 86.9 0.45 1.5E-05 40.0 3.6 32 56-88 2-33 (218)
238 2gv8_A Monooxygenase; FMO, FAD 86.6 0.6 2.1E-05 43.7 4.6 34 55-89 213-247 (447)
239 1fl2_A Alkyl hydroperoxide red 86.6 0.64 2.2E-05 40.6 4.6 34 56-90 146-179 (310)
240 3ic5_A Putative saccharopine d 86.5 0.63 2.2E-05 34.3 3.9 32 55-87 6-38 (118)
241 1zmd_A Dihydrolipoyl dehydroge 86.3 0.65 2.2E-05 43.8 4.7 34 56-90 180-213 (474)
242 2a8x_A Dihydrolipoyl dehydroge 86.1 0.67 2.3E-05 43.5 4.7 34 56-90 173-206 (464)
243 2q0l_A TRXR, thioredoxin reduc 86.0 0.78 2.7E-05 40.0 4.8 35 55-90 144-178 (311)
244 2r9z_A Glutathione amide reduc 86.0 0.69 2.4E-05 43.7 4.7 33 56-89 168-200 (463)
245 3gwf_A Cyclohexanone monooxyge 85.8 1 3.5E-05 43.7 5.9 35 54-89 178-212 (540)
246 3ef6_A Toluene 1,2-dioxygenase 85.2 0.81 2.8E-05 42.4 4.7 35 55-90 144-178 (410)
247 1q1r_A Putidaredoxin reductase 85.2 0.81 2.8E-05 42.8 4.7 35 55-90 150-184 (431)
248 2zbw_A Thioredoxin reductase; 85.2 0.79 2.7E-05 40.5 4.5 35 55-90 153-187 (335)
249 3kd9_A Coenzyme A disulfide re 85.1 0.81 2.8E-05 42.8 4.7 34 56-90 150-183 (449)
250 1onf_A GR, grase, glutathione 85.1 0.83 2.8E-05 43.6 4.8 34 56-90 178-211 (500)
251 1vdc_A NTR, NADPH dependent th 85.1 0.89 3E-05 40.1 4.8 35 55-90 160-194 (333)
252 3uox_A Otemo; baeyer-villiger 85.0 0.72 2.4E-05 44.9 4.4 35 55-90 186-220 (545)
253 1ojt_A Surface protein; redox- 85.0 0.64 2.2E-05 44.0 4.0 34 56-90 187-220 (482)
254 1dxl_A Dihydrolipoamide dehydr 84.8 0.56 1.9E-05 44.1 3.5 34 56-90 179-212 (470)
255 3ic9_A Dihydrolipoamide dehydr 84.8 0.83 2.8E-05 43.5 4.7 34 56-90 176-209 (492)
256 2hqm_A GR, grase, glutathione 84.8 0.85 2.9E-05 43.2 4.8 33 56-89 187-219 (479)
257 2xve_A Flavin-containing monoo 84.8 0.72 2.5E-05 43.7 4.2 33 56-89 199-231 (464)
258 2a87_A TRXR, TR, thioredoxin r 84.6 0.99 3.4E-05 40.1 4.8 35 55-90 156-190 (335)
259 1trb_A Thioredoxin reductase; 84.4 0.98 3.3E-05 39.5 4.7 35 55-90 146-180 (320)
260 2cdu_A NADPH oxidase; flavoenz 84.4 0.95 3.2E-05 42.4 4.8 34 56-90 151-184 (452)
261 3i83_A 2-dehydropantoate 2-red 84.4 0.94 3.2E-05 40.6 4.6 32 56-88 4-35 (320)
262 2q7v_A Thioredoxin reductase; 84.2 1 3.5E-05 39.7 4.7 34 56-90 154-187 (325)
263 4eqs_A Coenzyme A disulfide re 83.9 0.78 2.7E-05 43.1 4.0 34 56-90 149-182 (437)
264 1zk7_A HGII, reductase, mercur 83.8 0.99 3.4E-05 42.4 4.7 33 56-89 178-210 (467)
265 4g65_A TRK system potassium up 83.7 0.68 2.3E-05 44.2 3.5 33 56-89 5-37 (461)
266 3itj_A Thioredoxin reductase 1 83.5 1.2 4E-05 39.1 4.8 35 55-90 174-208 (338)
267 2qae_A Lipoamide, dihydrolipoy 83.4 1.1 3.7E-05 42.2 4.8 34 56-90 176-209 (468)
268 3hn2_A 2-dehydropantoate 2-red 83.3 0.95 3.2E-05 40.4 4.1 32 56-88 4-35 (312)
269 1ks9_A KPA reductase;, 2-dehyd 82.9 1.3 4.4E-05 38.4 4.8 32 57-89 3-34 (291)
270 3ado_A Lambda-crystallin; L-gu 82.9 1.1 3.6E-05 40.9 4.3 33 55-88 7-39 (319)
271 3cty_A Thioredoxin reductase; 82.8 1.2 3.9E-05 39.2 4.4 34 56-90 157-190 (319)
272 3ab1_A Ferredoxin--NADP reduct 82.6 1.2 3.9E-05 40.0 4.5 34 56-90 165-198 (360)
273 3l9w_A Glutathione-regulated p 82.5 1.1 3.6E-05 42.3 4.3 34 55-89 5-38 (413)
274 3ntd_A FAD-dependent pyridine 82.4 1.2 4.1E-05 42.8 4.7 34 56-90 153-186 (565)
275 3fg2_P Putative rubredoxin red 82.1 1.3 4.5E-05 40.7 4.7 35 55-90 143-177 (404)
276 3s5w_A L-ornithine 5-monooxyge 82.0 0.84 2.9E-05 42.6 3.4 37 54-90 227-264 (463)
277 3lxd_A FAD-dependent pyridine 82.0 1.3 4.5E-05 40.8 4.7 35 55-90 153-187 (415)
278 3urh_A Dihydrolipoyl dehydroge 81.8 1.1 3.6E-05 42.6 4.0 34 56-90 200-233 (491)
279 4g6h_A Rotenone-insensitive NA 81.7 0.71 2.4E-05 44.4 2.8 36 55-90 218-266 (502)
280 3l8k_A Dihydrolipoyl dehydroge 81.5 1.4 4.7E-05 41.5 4.7 34 56-90 174-207 (466)
281 4ap3_A Steroid monooxygenase; 81.1 1.5 5.1E-05 42.6 4.9 35 54-89 191-225 (549)
282 3dk9_A Grase, GR, glutathione 80.9 1.5 5.2E-05 41.3 4.8 33 56-89 189-221 (478)
283 2x8g_A Thioredoxin glutathione 80.9 1.3 4.5E-05 43.0 4.5 31 56-87 288-318 (598)
284 3ghy_A Ketopantoate reductase 80.8 1.4 4.7E-05 39.8 4.3 31 56-87 5-35 (335)
285 1f0y_A HCDH, L-3-hydroxyacyl-C 80.6 1.5 5.2E-05 38.8 4.4 32 56-88 17-48 (302)
286 2raf_A Putative dinucleotide-b 80.5 1.8 6.3E-05 36.3 4.7 33 55-88 20-52 (209)
287 2ew2_A 2-dehydropantoate 2-red 80.0 1.6 5.6E-05 38.1 4.4 32 56-88 5-36 (316)
288 4e12_A Diketoreductase; oxidor 79.9 1.7 5.7E-05 38.3 4.4 33 56-89 6-38 (283)
289 3lad_A Dihydrolipoamide dehydr 79.7 1.7 5.9E-05 40.8 4.7 34 56-90 182-215 (476)
290 2wpf_A Trypanothione reductase 79.6 1.4 4.8E-05 42.0 4.1 34 56-90 193-229 (495)
291 1fec_A Trypanothione reductase 79.6 1.4 4.7E-05 41.9 4.0 33 56-89 189-224 (490)
292 3oc4_A Oxidoreductase, pyridin 79.5 1.8 6.1E-05 40.5 4.7 34 56-90 149-182 (452)
293 3g17_A Similar to 2-dehydropan 79.4 1.2 4E-05 39.4 3.3 32 56-88 4-35 (294)
294 1cjc_A Protein (adrenodoxin re 79.1 1.9 6.5E-05 40.8 4.8 35 55-89 146-200 (460)
295 1lld_A L-lactate dehydrogenase 78.8 1.8 6.3E-05 38.4 4.4 33 55-88 8-42 (319)
296 3ics_A Coenzyme A-disulfide re 78.7 1.9 6.4E-05 41.9 4.7 34 56-90 189-222 (588)
297 1kyq_A Met8P, siroheme biosynt 78.7 1.3 4.6E-05 39.4 3.4 33 54-87 13-45 (274)
298 3dfz_A SIRC, precorrin-2 dehyd 78.5 1.9 6.6E-05 37.2 4.2 34 53-87 30-63 (223)
299 1xdi_A RV3303C-LPDA; reductase 78.4 2 6.7E-05 40.8 4.7 34 56-90 184-217 (499)
300 3k6j_A Protein F01G10.3, confi 78.3 2.6 8.8E-05 40.3 5.4 43 46-89 46-88 (460)
301 3fbs_A Oxidoreductase; structu 78.3 1.9 6.7E-05 36.8 4.3 33 55-89 142-174 (297)
302 1mo9_A ORF3; nucleotide bindin 78.2 2 6.8E-05 41.2 4.7 35 55-90 215-249 (523)
303 3f8d_A Thioredoxin reductase ( 78.0 1.8 6E-05 37.5 3.9 35 55-90 155-189 (323)
304 1hyu_A AHPF, alkyl hydroperoxi 77.8 1.5 5.2E-05 42.1 3.7 34 56-90 357-390 (521)
305 4gx0_A TRKA domain protein; me 77.8 11 0.00036 36.4 9.8 36 53-89 126-161 (565)
306 3hwr_A 2-dehydropantoate 2-red 77.5 2 6.9E-05 38.5 4.3 33 54-88 19-51 (318)
307 3lzw_A Ferredoxin--NADP reduct 77.4 2.3 7.9E-05 37.0 4.6 35 55-90 155-189 (332)
308 3r9u_A Thioredoxin reductase; 77.2 2.4 8.1E-05 36.6 4.6 35 55-90 148-182 (315)
309 3dgz_A Thioredoxin reductase 2 77.1 2.2 7.5E-05 40.3 4.6 32 56-88 187-218 (488)
310 4a9w_A Monooxygenase; baeyer-v 76.9 2.6 8.8E-05 37.0 4.7 32 55-88 164-195 (357)
311 1jw9_B Molybdopterin biosynthe 76.6 1.9 6.4E-05 37.5 3.7 35 54-89 31-66 (249)
312 3iwa_A FAD-dependent pyridine 76.5 2 6.7E-05 40.4 4.1 35 55-90 160-195 (472)
313 2aef_A Calcium-gated potassium 76.4 1.5 5E-05 37.2 2.9 33 55-89 10-42 (234)
314 1bg6_A N-(1-D-carboxylethyl)-L 76.2 2.4 8.2E-05 38.0 4.4 32 56-88 6-37 (359)
315 3ego_A Probable 2-dehydropanto 75.7 2.7 9.1E-05 37.5 4.5 32 56-89 4-35 (307)
316 3o0h_A Glutathione reductase; 75.4 2.6 8.9E-05 39.8 4.6 34 56-90 193-226 (484)
317 1txg_A Glycerol-3-phosphate de 74.9 2.2 7.4E-05 37.9 3.7 29 57-86 3-31 (335)
318 3qfa_A Thioredoxin reductase 1 74.8 2.6 8.8E-05 40.4 4.4 31 56-87 212-242 (519)
319 1z82_A Glycerol-3-phosphate de 74.7 2.8 9.5E-05 37.6 4.4 34 54-88 14-47 (335)
320 2dpo_A L-gulonate 3-dehydrogen 74.4 2.8 9.4E-05 38.0 4.3 32 56-88 8-39 (319)
321 4gx0_A TRKA domain protein; me 74.3 3 0.0001 40.3 4.8 35 55-90 349-383 (565)
322 4dna_A Probable glutathione re 73.9 3 0.0001 39.0 4.6 34 56-90 172-205 (463)
323 3oj0_A Glutr, glutamyl-tRNA re 73.9 1.8 6.2E-05 33.7 2.6 33 55-88 22-54 (144)
324 1jay_A Coenzyme F420H2:NADP+ o 73.8 3.4 0.00012 34.1 4.5 31 57-88 3-34 (212)
325 2y0c_A BCEC, UDP-glucose dehyd 73.7 2.8 9.7E-05 40.1 4.4 34 54-88 8-41 (478)
326 3c7a_A Octopine dehydrogenase; 73.4 2.7 9.3E-05 38.7 4.1 30 56-85 4-33 (404)
327 1zcj_A Peroxisomal bifunctiona 72.9 3.2 0.00011 39.5 4.5 32 56-88 39-70 (463)
328 2vdc_G Glutamate synthase [NAD 72.6 3.6 0.00012 38.9 4.8 35 55-90 265-300 (456)
329 3dgh_A TRXR-1, thioredoxin red 72.6 3.3 0.00011 39.0 4.6 32 56-88 189-220 (483)
330 1lqt_A FPRA; NADP+ derivative, 72.0 3.9 0.00013 38.5 4.9 35 55-89 148-202 (456)
331 2vns_A Metalloreductase steap3 71.4 3.9 0.00013 34.3 4.3 33 55-88 29-61 (215)
332 2qyt_A 2-dehydropantoate 2-red 71.0 2.5 8.6E-05 37.1 3.2 30 56-86 10-45 (317)
333 3k96_A Glycerol-3-phosphate de 70.9 3.8 0.00013 37.6 4.4 33 55-88 30-62 (356)
334 2ewd_A Lactate dehydrogenase,; 70.9 3.5 0.00012 36.9 4.1 33 55-88 5-38 (317)
335 1mv8_A GMD, GDP-mannose 6-dehy 70.9 3.3 0.00011 38.9 4.1 31 57-88 3-33 (436)
336 1evy_A Glycerol-3-phosphate de 70.8 2.8 9.7E-05 38.0 3.5 32 56-88 17-48 (366)
337 4b1b_A TRXR, thioredoxin reduc 70.5 3.1 0.00011 40.4 3.9 32 56-88 225-256 (542)
338 3dtt_A NADP oxidoreductase; st 70.5 4.2 0.00014 34.8 4.4 35 54-89 19-53 (245)
339 2v6b_A L-LDH, L-lactate dehydr 70.5 4 0.00014 36.4 4.4 31 57-88 3-35 (304)
340 3gg2_A Sugar dehydrogenase, UD 70.2 3.8 0.00013 38.8 4.4 32 56-88 4-35 (450)
341 2pv7_A T-protein [includes: ch 70.1 4.5 0.00015 35.7 4.6 33 56-89 23-56 (298)
342 3pef_A 6-phosphogluconate dehy 69.2 4.7 0.00016 35.2 4.5 33 56-89 3-35 (287)
343 3g0o_A 3-hydroxyisobutyrate de 68.8 4.6 0.00016 35.6 4.4 33 55-88 8-40 (303)
344 1pzg_A LDH, lactate dehydrogen 68.6 3.6 0.00012 37.3 3.7 34 55-89 10-44 (331)
345 2f1k_A Prephenate dehydrogenas 68.5 4.8 0.00017 34.7 4.4 31 57-88 3-33 (279)
346 2hjr_A Malate dehydrogenase; m 68.5 4.6 0.00016 36.5 4.4 34 55-89 15-49 (328)
347 3doj_A AT3G25530, dehydrogenas 68.4 4.7 0.00016 35.8 4.4 34 55-89 22-55 (310)
348 4a7p_A UDP-glucose dehydrogena 68.3 5.2 0.00018 37.9 4.9 37 53-90 7-43 (446)
349 2uyy_A N-PAC protein; long-cha 68.2 4.8 0.00017 35.5 4.4 34 55-89 31-64 (316)
350 1o94_A Tmadh, trimethylamine d 68.1 3.7 0.00012 41.2 3.9 32 56-88 530-563 (729)
351 3gpi_A NAD-dependent epimerase 67.3 5.9 0.0002 34.0 4.7 33 56-89 5-37 (286)
352 1m6i_A Programmed cell death p 67.2 4.1 0.00014 38.6 4.0 34 55-88 181-217 (493)
353 2h78_A Hibadh, 3-hydroxyisobut 66.9 4.7 0.00016 35.3 4.1 32 56-88 5-36 (302)
354 3qha_A Putative oxidoreductase 66.7 5.3 0.00018 35.2 4.3 34 55-89 16-49 (296)
355 1a5z_A L-lactate dehydrogenase 66.5 4.2 0.00015 36.5 3.7 31 57-88 3-35 (319)
356 1guz_A Malate dehydrogenase; o 66.3 6.6 0.00022 35.0 4.9 34 56-89 2-36 (310)
357 3ius_A Uncharacterized conserv 66.2 5.9 0.0002 33.9 4.5 33 56-89 7-39 (286)
358 2g5c_A Prephenate dehydrogenas 66.1 5.6 0.00019 34.4 4.3 32 56-88 3-36 (281)
359 1yqg_A Pyrroline-5-carboxylate 66.1 4.6 0.00016 34.5 3.7 31 57-88 3-34 (263)
360 1t2d_A LDH-P, L-lactate dehydr 65.6 5.6 0.00019 35.9 4.3 33 55-88 5-38 (322)
361 1yj8_A Glycerol-3-phosphate de 65.3 3.8 0.00013 37.4 3.2 33 56-89 23-62 (375)
362 4huj_A Uncharacterized protein 65.3 3.8 0.00013 34.5 2.9 34 55-89 24-58 (220)
363 3mog_A Probable 3-hydroxybutyr 65.1 5.4 0.00018 38.2 4.3 32 56-88 7-38 (483)
364 4dll_A 2-hydroxy-3-oxopropiona 65.1 5.4 0.00018 35.6 4.1 34 55-89 32-65 (320)
365 4g65_A TRK system potassium up 65.0 5.4 0.00018 37.9 4.3 34 55-90 236-269 (461)
366 3g79_A NDP-N-acetyl-D-galactos 64.9 5.5 0.00019 38.2 4.3 35 55-89 19-54 (478)
367 3c24_A Putative oxidoreductase 64.9 6 0.0002 34.5 4.3 32 56-88 13-45 (286)
368 1zej_A HBD-9, 3-hydroxyacyl-CO 64.8 6.2 0.00021 35.2 4.4 33 54-88 12-44 (293)
369 1vpd_A Tartronate semialdehyde 64.6 5.6 0.00019 34.6 4.1 32 56-88 7-38 (299)
370 4ezb_A Uncharacterized conserv 64.6 6.4 0.00022 35.2 4.5 32 56-88 26-58 (317)
371 3ggo_A Prephenate dehydrogenas 64.5 6.1 0.00021 35.4 4.3 33 55-88 34-68 (314)
372 2gf2_A Hibadh, 3-hydroxyisobut 64.4 6 0.00021 34.4 4.2 33 56-89 2-34 (296)
373 1x0v_A GPD-C, GPDH-C, glycerol 64.1 3.7 0.00012 36.9 2.8 33 56-89 10-49 (354)
374 1gte_A Dihydropyrimidine dehyd 64.1 5.8 0.0002 41.5 4.6 32 56-88 334-366 (1025)
375 3ew7_A LMO0794 protein; Q8Y8U8 64.0 7.7 0.00026 31.5 4.6 32 57-89 3-35 (221)
376 1nyt_A Shikimate 5-dehydrogena 64.0 6.7 0.00023 34.2 4.4 33 55-88 120-152 (271)
377 3pdu_A 3-hydroxyisobutyrate de 63.9 4.6 0.00016 35.2 3.4 33 56-89 3-35 (287)
378 3rui_A Ubiquitin-like modifier 63.8 7.1 0.00024 35.8 4.7 37 53-90 33-70 (340)
379 1hyh_A L-hicdh, L-2-hydroxyiso 63.5 5.2 0.00018 35.5 3.6 32 56-88 3-36 (309)
380 2gag_A Heterotetrameric sarcos 63.4 4 0.00014 42.4 3.3 33 56-89 286-318 (965)
381 1i36_A Conserved hypothetical 63.3 6.4 0.00022 33.6 4.1 29 57-86 3-31 (264)
382 1dlj_A UDP-glucose dehydrogena 62.9 6.5 0.00022 36.5 4.3 30 57-88 3-32 (402)
383 1hdo_A Biliverdin IX beta redu 62.3 8.2 0.00028 30.9 4.4 33 56-89 5-38 (206)
384 3cky_A 2-hydroxymethyl glutara 62.3 6.7 0.00023 34.2 4.1 33 55-88 5-37 (301)
385 3h2s_A Putative NADH-flavin re 62.2 7.9 0.00027 31.6 4.4 31 57-88 3-34 (224)
386 1w4x_A Phenylacetone monooxyge 62.0 5.3 0.00018 38.3 3.6 35 55-90 187-221 (542)
387 3lk7_A UDP-N-acetylmuramoylala 61.8 6.8 0.00023 36.8 4.3 33 55-88 10-42 (451)
388 4dio_A NAD(P) transhydrogenase 61.7 8.1 0.00028 36.3 4.7 36 54-90 190-225 (405)
389 3vtf_A UDP-glucose 6-dehydroge 61.4 7.1 0.00024 37.1 4.3 35 53-88 20-54 (444)
390 2eez_A Alanine dehydrogenase; 61.3 7.5 0.00026 35.5 4.4 33 55-88 167-199 (369)
391 3l6d_A Putative oxidoreductase 61.2 7.6 0.00026 34.4 4.3 33 55-88 10-42 (306)
392 2cvz_A Dehydrogenase, 3-hydrox 61.2 7.3 0.00025 33.6 4.1 32 56-89 3-34 (289)
393 3tl2_A Malate dehydrogenase; c 60.7 8 0.00027 34.8 4.4 32 55-87 9-41 (315)
394 1ur5_A Malate dehydrogenase; o 60.7 7.9 0.00027 34.6 4.3 32 56-88 4-36 (309)
395 1pjq_A CYSG, siroheme synthase 60.6 6.8 0.00023 37.1 4.1 32 55-87 13-44 (457)
396 3qsg_A NAD-binding phosphogluc 60.4 6.4 0.00022 35.0 3.7 32 55-87 25-57 (312)
397 1yb4_A Tartronic semialdehyde 60.4 6.8 0.00023 33.9 3.8 31 56-88 5-35 (295)
398 1lnq_A MTHK channels, potassiu 60.3 4.8 0.00016 36.0 2.8 33 55-89 116-148 (336)
399 1zud_1 Adenylyltransferase THI 60.2 8.2 0.00028 33.4 4.3 35 54-89 28-63 (251)
400 2rcy_A Pyrroline carboxylate r 60.2 6.8 0.00023 33.4 3.7 33 56-89 6-42 (262)
401 2x5o_A UDP-N-acetylmuramoylala 60.0 6.6 0.00023 36.7 3.9 34 56-90 7-40 (439)
402 2rir_A Dipicolinate synthase, 60.0 8.5 0.00029 34.0 4.4 33 55-88 158-190 (300)
403 3e8x_A Putative NAD-dependent 59.9 9.4 0.00032 31.7 4.5 33 56-89 23-56 (236)
404 3d4o_A Dipicolinate synthase s 59.9 8.6 0.00029 33.8 4.4 33 55-88 156-188 (293)
405 3ond_A Adenosylhomocysteinase; 59.6 8.1 0.00028 37.2 4.4 33 55-88 266-298 (488)
406 2zyd_A 6-phosphogluconate dehy 59.3 8.4 0.00029 36.7 4.5 34 54-88 15-48 (480)
407 4e21_A 6-phosphogluconate dehy 59.2 8.7 0.0003 35.2 4.4 35 53-88 21-55 (358)
408 2wtb_A MFP2, fatty acid multif 59.1 7.8 0.00027 39.0 4.4 32 56-88 314-345 (725)
409 1leh_A Leucine dehydrogenase; 59.1 8.5 0.00029 35.5 4.3 32 55-87 174-205 (364)
410 1pgj_A 6PGDH, 6-PGDH, 6-phosph 59.1 8.2 0.00028 36.7 4.4 32 56-88 3-34 (478)
411 1x13_A NAD(P) transhydrogenase 59.0 8.8 0.0003 35.7 4.5 34 55-89 173-206 (401)
412 2a9f_A Putative malic enzyme ( 58.9 7.2 0.00025 36.6 3.8 36 52-88 186-222 (398)
413 3ktd_A Prephenate dehydrogenas 58.7 8.7 0.0003 35.0 4.3 32 56-88 10-41 (341)
414 2egg_A AROE, shikimate 5-dehyd 58.4 9.7 0.00033 33.8 4.5 33 55-88 142-175 (297)
415 2ph5_A Homospermidine synthase 58.4 6.5 0.00022 37.8 3.5 34 54-87 13-49 (480)
416 1vl6_A Malate oxidoreductase; 58.3 7.5 0.00026 36.3 3.8 36 52-88 190-226 (388)
417 3nkl_A UDP-D-quinovosamine 4-d 58.2 9.2 0.00032 29.2 3.8 27 55-81 5-31 (141)
418 2vhw_A Alanine dehydrogenase; 58.0 9.2 0.00032 35.1 4.4 33 55-88 169-201 (377)
419 3dqp_A Oxidoreductase YLBE; al 57.8 11 0.00037 30.9 4.5 32 57-89 3-35 (219)
420 4ffl_A PYLC; amino acid, biosy 57.6 11 0.00037 33.9 4.7 32 57-89 4-35 (363)
421 1l7d_A Nicotinamide nucleotide 57.2 11 0.00038 34.6 4.8 35 54-89 172-206 (384)
422 2izz_A Pyrroline-5-carboxylate 57.2 9.1 0.00031 34.1 4.1 34 55-89 23-60 (322)
423 3d1l_A Putative NADP oxidoredu 57.2 7.9 0.00027 33.1 3.6 33 55-88 11-44 (266)
424 1nvt_A Shikimate 5'-dehydrogen 57.1 9.8 0.00034 33.3 4.3 30 56-87 130-159 (287)
425 3gt0_A Pyrroline-5-carboxylate 57.1 10 0.00034 32.3 4.2 33 56-89 4-40 (247)
426 3vps_A TUNA, NAD-dependent epi 57.1 11 0.00039 32.4 4.6 33 56-89 9-42 (321)
427 3k30_A Histamine dehydrogenase 56.9 8.1 0.00028 38.3 4.1 34 56-90 525-560 (690)
428 2pgd_A 6-phosphogluconate dehy 56.9 10 0.00035 36.0 4.6 33 55-88 3-35 (482)
429 4b63_A L-ornithine N5 monooxyg 56.9 11 0.00037 35.9 4.8 35 56-90 248-283 (501)
430 1np3_A Ketol-acid reductoisome 56.8 9.8 0.00033 34.3 4.3 32 56-88 18-49 (338)
431 3o38_A Short chain dehydrogena 56.8 8.2 0.00028 32.9 3.6 32 56-88 24-57 (266)
432 2hk9_A Shikimate dehydrogenase 56.7 8.3 0.00028 33.6 3.7 33 55-88 130-162 (275)
433 3vh1_A Ubiquitin-like modifier 56.7 11 0.00037 37.3 4.8 35 54-89 327-362 (598)
434 1pjc_A Protein (L-alanine dehy 56.5 10 0.00035 34.5 4.4 33 55-88 168-200 (361)
435 2ahr_A Putative pyrroline carb 56.4 11 0.00038 32.0 4.4 32 56-88 5-36 (259)
436 2o3j_A UDP-glucose 6-dehydroge 55.9 7 0.00024 37.2 3.3 33 56-88 11-44 (481)
437 2q3e_A UDP-glucose 6-dehydroge 55.7 7.1 0.00024 36.9 3.3 33 56-88 7-40 (467)
438 3gvi_A Malate dehydrogenase; N 55.6 11 0.00038 34.1 4.4 34 55-89 8-42 (324)
439 4gsl_A Ubiquitin-like modifier 55.5 11 0.00038 37.3 4.7 38 53-90 325-362 (615)
440 3p2y_A Alanine dehydrogenase/p 55.5 8.7 0.0003 35.8 3.7 34 55-89 185-218 (381)
441 2d5c_A AROE, shikimate 5-dehyd 55.5 11 0.00038 32.4 4.3 32 56-88 118-149 (263)
442 3r6d_A NAD-dependent epimerase 55.4 12 0.00042 30.6 4.4 32 57-89 8-41 (221)
443 3pid_A UDP-glucose 6-dehydroge 55.3 10 0.00036 35.8 4.3 33 55-89 37-69 (432)
444 4fk1_A Putative thioredoxin re 55.2 14 0.00048 32.0 4.9 34 56-90 148-182 (304)
445 3p7m_A Malate dehydrogenase; p 55.1 11 0.00038 34.0 4.3 34 55-89 6-40 (321)
446 3h8v_A Ubiquitin-like modifier 55.0 9.2 0.00032 34.2 3.7 37 52-89 34-71 (292)
447 1p77_A Shikimate 5-dehydrogena 54.8 8.3 0.00028 33.6 3.3 33 55-88 120-152 (272)
448 3ojo_A CAP5O; rossmann fold, c 54.5 8.5 0.00029 36.3 3.6 34 55-89 12-45 (431)
449 1y6j_A L-lactate dehydrogenase 54.2 12 0.0004 33.6 4.3 33 55-88 8-42 (318)
450 2axq_A Saccharopine dehydrogen 54.1 9 0.00031 36.5 3.7 33 55-87 24-56 (467)
451 3dfu_A Uncharacterized protein 53.9 4.2 0.00014 35.3 1.2 31 55-86 7-37 (232)
452 2iz1_A 6-phosphogluconate dehy 53.8 11 0.00039 35.6 4.4 33 55-88 6-38 (474)
453 2dkn_A 3-alpha-hydroxysteroid 53.7 16 0.00054 30.3 4.9 32 57-89 4-36 (255)
454 3phh_A Shikimate dehydrogenase 53.7 13 0.00044 32.8 4.4 34 55-89 119-152 (269)
455 2dbq_A Glyoxylate reductase; D 53.6 14 0.00047 33.3 4.8 34 55-89 151-184 (334)
456 1wdk_A Fatty oxidation complex 53.5 8.6 0.0003 38.6 3.6 32 56-88 316-347 (715)
457 2p4q_A 6-phosphogluconate dehy 53.5 13 0.00044 35.6 4.7 34 54-88 10-43 (497)
458 3h5n_A MCCB protein; ubiquitin 53.4 10 0.00036 34.6 3.9 35 54-89 118-153 (353)
459 3b1f_A Putative prephenate deh 53.2 10 0.00034 32.9 3.6 33 56-88 8-41 (290)
460 3abi_A Putative uncharacterize 53.1 12 0.00041 33.9 4.3 32 54-87 16-47 (365)
461 3dhn_A NAD-dependent epimerase 52.8 12 0.00041 30.6 3.9 33 56-89 6-39 (227)
462 1lu9_A Methylene tetrahydromet 52.8 13 0.00046 32.3 4.4 32 55-87 120-152 (287)
463 3pqe_A L-LDH, L-lactate dehydr 52.6 10 0.00035 34.3 3.7 32 55-87 6-39 (326)
464 3q2o_A Phosphoribosylaminoimid 52.4 15 0.00053 33.3 4.9 35 54-89 14-48 (389)
465 3zwc_A Peroxisomal bifunctiona 52.2 67 0.0023 32.4 9.9 34 55-89 317-350 (742)
466 1oju_A MDH, malate dehydrogena 52.2 11 0.00036 33.7 3.7 31 57-88 3-35 (294)
467 3tri_A Pyrroline-5-carboxylate 52.1 14 0.00049 32.2 4.5 33 56-89 5-40 (280)
468 2i6t_A Ubiquitin-conjugating e 51.9 11 0.00037 33.7 3.6 33 55-88 15-49 (303)
469 4id9_A Short-chain dehydrogena 51.5 16 0.00054 32.1 4.7 33 55-88 20-53 (347)
470 3u62_A Shikimate dehydrogenase 51.5 14 0.00048 32.0 4.3 32 56-88 110-142 (253)
471 3ko8_A NAD-dependent epimerase 50.7 18 0.0006 31.2 4.8 32 57-89 3-35 (312)
472 4ina_A Saccharopine dehydrogen 50.7 15 0.00052 34.0 4.6 32 56-87 3-36 (405)
473 3aw8_A PURK, phosphoribosylami 50.3 16 0.00054 32.8 4.6 32 57-89 2-33 (369)
474 1c1d_A L-phenylalanine dehydro 50.0 15 0.00051 33.8 4.3 33 54-87 175-207 (355)
475 3orq_A N5-carboxyaminoimidazol 49.7 18 0.00061 32.9 4.9 36 54-90 12-47 (377)
476 3ce6_A Adenosylhomocysteinase; 49.7 15 0.0005 35.4 4.4 34 55-89 275-308 (494)
477 4aj2_A L-lactate dehydrogenase 49.6 15 0.00052 33.3 4.3 33 54-87 19-53 (331)
478 2z1m_A GDP-D-mannose dehydrata 49.6 18 0.00061 31.5 4.7 31 57-88 6-37 (345)
479 3gvp_A Adenosylhomocysteinase 49.5 15 0.00052 34.8 4.4 34 54-88 220-253 (435)
480 4b4o_A Epimerase family protei 49.2 19 0.00065 30.9 4.8 31 57-88 3-34 (298)
481 1ff9_A Saccharopine reductase; 49.2 14 0.00047 34.9 4.1 31 56-87 5-35 (450)
482 4gwg_A 6-phosphogluconate dehy 48.7 17 0.00057 34.9 4.6 34 55-89 5-38 (484)
483 3ldh_A Lactate dehydrogenase; 48.7 13 0.00043 33.9 3.6 33 54-87 21-55 (330)
484 2gcg_A Glyoxylate reductase/hy 48.7 16 0.00054 32.9 4.3 33 55-88 156-188 (330)
485 3jyo_A Quinate/shikimate dehyd 48.7 17 0.00058 32.1 4.4 33 55-88 128-161 (283)
486 1tt5_B Ubiquitin-activating en 48.6 16 0.00054 34.5 4.4 36 53-89 39-75 (434)
487 3don_A Shikimate dehydrogenase 48.5 15 0.00051 32.4 4.0 33 55-88 118-151 (277)
488 2ydy_A Methionine adenosyltran 48.5 17 0.00059 31.3 4.4 30 57-87 5-35 (315)
489 3ba1_A HPPR, hydroxyphenylpyru 48.4 19 0.00064 32.6 4.8 34 55-89 165-198 (333)
490 1y8q_A Ubiquitin-like 1 activa 48.1 13 0.00046 33.7 3.7 35 54-89 36-71 (346)
491 3qvo_A NMRA family protein; st 47.9 17 0.00057 30.3 4.1 34 55-89 24-59 (236)
492 1qyc_A Phenylcoumaran benzylic 47.8 15 0.00051 31.5 3.9 32 56-88 6-38 (308)
493 2d0i_A Dehydrogenase; structur 47.8 19 0.00066 32.4 4.7 34 55-89 147-180 (333)
494 3tnl_A Shikimate dehydrogenase 47.8 17 0.00059 32.7 4.4 32 55-87 155-187 (315)
495 3ruf_A WBGU; rossmann fold, UD 47.7 20 0.00067 31.5 4.7 33 56-89 27-60 (351)
496 2yjz_A Metalloreductase steap4 53.4 3.9 0.00013 34.2 0.0 34 55-89 20-53 (201)
497 3vku_A L-LDH, L-lactate dehydr 47.5 14 0.00046 33.6 3.6 32 55-87 10-43 (326)
498 2bll_A Protein YFBG; decarboxy 47.1 21 0.0007 31.1 4.7 32 57-88 3-35 (345)
499 3o8q_A Shikimate 5-dehydrogena 46.7 20 0.00068 31.6 4.5 33 55-88 127-160 (281)
500 1eq2_A ADP-L-glycero-D-mannohe 46.6 22 0.00074 30.4 4.7 32 57-89 2-35 (310)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=5.6e-43 Score=347.66 Aligned_cols=199 Identities=31% Similarity=0.589 Sum_probs=179.9
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc--cccccccccccccc-CCcccccccccCCCCCccccCCCCCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE--NIYTNIPLLAHFNS-LTHFNWGYKLEKNEEHPQCLGMYNDQ 130 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~--~~~~~~p~~~~~~~-~~~~~w~~~~~p~~~~~~~~~~~~~~ 130 (284)
+|||||||+|++||++|.||+|+++.+|||||+|+.. ....++|.....+. .+.++|.|.++||. +++++.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~------~~~~r~ 75 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQA------GYNGRS 75 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCG------GGTTCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCC------CCCCce
Confidence 5999999999999999999999889999999999876 35567787665444 47899999999998 788999
Q ss_pred cccCcccccCCccccccccccCCChhhHHHHHhc-CCCCCChhhHHHHHHHHhhccCCC--------CCCCCCCcccCce
Q psy4112 131 CPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAA-GNKGWGYDSVLKYFLKSENNTSEF--------LDADIHSREGPLK 201 (284)
Q Consensus 131 ~~~~rGk~lGGsS~iN~~~~~R~~~~D~d~W~~~-G~~gW~~~~l~pyf~k~E~~~~~~--------~~~~~hG~~Gpl~ 201 (284)
+.++|||+|||||+||+|+|+|+++.|||.|+++ |++||+|++|+|||+|+|++..+. .++.+||.+||++
T Consensus 76 ~~~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~ 155 (566)
T 3fim_B 76 IAYPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVS 155 (566)
T ss_dssp CBCCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEE
T ss_pred EeccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCee
Confidence 9999999999999999999999999999999999 999999999999999999998652 2457899999999
Q ss_pred eecCCcchhhhhhhhcccCCCCcccCCcccchHHHHHHHHHHHc--CCCcc-CCCCCCCCCcccccccccccCCcccchh
Q psy4112 202 VTNIPYQNLLTEKFTQAKEGPLKVTNIPYQNLLTEKFTQAACEL--GYRIY-DYTGIEPATEGFSKLQSTLSKGQRYSAN 278 (284)
Q Consensus 202 v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~A~~~l--G~~~~-D~n~~~~~~~G~~~~~~ti~~G~R~sa~ 278 (284)
|+.+.+ ..++...|++|++++ |++.. |+|++.. .|++.++.++++|+|+|++
T Consensus 156 v~~~~~-----------------------~~~~~~~~~~a~~~~~~G~~~~~d~n~~~~--~G~~~~~~~~~~g~R~sa~ 210 (566)
T 3fim_B 156 ISLPGF-----------------------PTPLDDRVLATTQEQSEEFFFNPDMGTGHP--LGISWSIASVGNGQRSSSS 210 (566)
T ss_dssp EBSCSS-----------------------CCTHHHHHHHHHHHTHHHHCBCSCGGGSCC--CEEEECCBSEETTEECCHH
T ss_pred eecCCC-----------------------CCHHHHHHHHHHHHHhcCCCccCCCCCCCc--ceEEeeeeecCCCEEcCHH
Confidence 998766 678999999999999 99986 8998888 8999999999999999999
Q ss_pred hhccC
Q psy4112 279 RAYLK 283 (284)
Q Consensus 279 ~ayL~ 283 (284)
.+||.
T Consensus 211 ~ayL~ 215 (566)
T 3fim_B 211 TAYLR 215 (566)
T ss_dssp HHTHH
T ss_pred HHHhh
Confidence 99985
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=5.7e-42 Score=341.37 Aligned_cols=204 Identities=26% Similarity=0.366 Sum_probs=175.0
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc---ccccccccccccccCCcccccccccCCCCCccccCCCC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE---NIYTNIPLLAHFNSLTHFNWGYKLEKNEEHPQCLGMYN 128 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~---~~~~~~p~~~~~~~~~~~~w~~~~~p~~~~~~~~~~~~ 128 (284)
.++|||||||+|.|||++|.||+|+++.+|||||||++. .+...+|.....+..+.++|.|.++||. .++
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-------~~~ 89 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-------TNN 89 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-------TTS
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-------CCC
Confidence 457999999999999999999999889999999999943 2334455554444567899999999986 467
Q ss_pred CCcccCcccccCCccccccccccCCChhhHHHHHhcCCC-CCChhhHHHHHHHHhhccCCC---------CCCCCCCccc
Q psy4112 129 DQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNK-GWGYDSVLKYFLKSENNTSEF---------LDADIHSREG 198 (284)
Q Consensus 129 ~~~~~~rGk~lGGsS~iN~~~~~R~~~~D~d~W~~~G~~-gW~~~~l~pyf~k~E~~~~~~---------~~~~~hG~~G 198 (284)
+.+.|+|||+|||||+||+|+|+|+++.|||.|+++|++ +|+|++|+|||+|+|++..+. .+..+||.+|
T Consensus 90 r~~~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~G 169 (583)
T 3qvp_A 90 QTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNG 169 (583)
T ss_dssp CCCEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSS
T ss_pred CeeeccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCC
Confidence 889999999999999999999999999999999999888 999999999999999997542 3567899999
Q ss_pred CceeecCCcchhhhhhhhcccCCCCcccCCcccchHHHHHHHHHHHcCCCcc-CCCCCCCCCccccccccccc-CCcccc
Q psy4112 199 PLKVTNIPYQNLLTEKFTQAKEGPLKVTNIPYQNLLTEKFTQAACELGYRIY-DYTGIEPATEGFSKLQSTLS-KGQRYS 276 (284)
Q Consensus 199 pl~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~A~~~lG~~~~-D~n~~~~~~~G~~~~~~ti~-~G~R~s 276 (284)
|++++++.. + ....++.+.|+++++++|++.. |+|++.. .|++..+.+++ +|.|+|
T Consensus 170 pl~v~~~~~--------------~------~~~~~~~~~~~~a~~~~G~~~~~D~n~~~~--~G~~~~~~t~~~~g~R~s 227 (583)
T 3qvp_A 170 TVHAGPRDT--------------G------DDYSPIVKALMSAVEDRGVPTKKDFGCGDP--HGVSMFPNTLHEDQVRSD 227 (583)
T ss_dssp SEEEBCCCC--------------S------SCBCTHHHHHHHHHHTTTCCBCCCTTSSCC--CEEECCCBSBCTTCBBCC
T ss_pred CEEecCCCC--------------c------ccCCHHHHHHHHHHHHcCCCcCCCCCCCCC--ceecccceeEcCCCcEec
Confidence 999987521 0 0146889999999999999986 8999888 99999899986 799999
Q ss_pred hhhhccCC
Q psy4112 277 ANRAYLKS 284 (284)
Q Consensus 277 a~~ayL~~ 284 (284)
++++||.+
T Consensus 228 aa~ayL~p 235 (583)
T 3qvp_A 228 AAREWLLP 235 (583)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHHH
Confidence 99999964
No 3
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=1.9e-38 Score=309.58 Aligned_cols=200 Identities=31% Similarity=0.508 Sum_probs=173.4
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCccc-cccccccccccccCCcccccccccCCCCCccccCCCCCC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDEN-IYTNIPLLAHFNSLTHFNWGYKLEKNEEHPQCLGMYNDQ 130 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~~-~~~~~p~~~~~~~~~~~~w~~~~~p~~~~~~~~~~~~~~ 130 (284)
..+|||||||||++||++|.||+|+++++|||||+|+... .....|.....+..+.++|.|.++||. +++++.
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~------~~~~~~ 88 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQA------GTAGRA 88 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBG------GGTTBC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccC------CCCCCe
Confidence 4579999999999999999999998899999999998753 445667776667778899999999998 778899
Q ss_pred cccCcccccCCccccccccccCCChhhHHHHHhc-CCCCCChhhHHHHHHHHhhccCCCCCCCCCCcccCceeecCCcch
Q psy4112 131 CPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAA-GNKGWGYDSVLKYFLKSENNTSEFLDADIHSREGPLKVTNIPYQN 209 (284)
Q Consensus 131 ~~~~rGk~lGGsS~iN~~~~~R~~~~D~d~W~~~-G~~gW~~~~l~pyf~k~E~~~~~~~~~~~hG~~Gpl~v~~~~~~~ 209 (284)
+.++|||+|||||+||+|+|+|+++.|||.|++. ++.+|+|++++|||+++|++... ....|+..|++.+.....
T Consensus 89 ~~~~rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~--~~~~~~~~g~~~~~~~~~-- 164 (526)
T 3t37_A 89 HHWARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLG--GDGIHGKGGPLPIHLPAD-- 164 (526)
T ss_dssp CEECCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTT--TSSSSCSSCSEECBCCST--
T ss_pred EeccCccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCC--CccccCcCCCcCcccccc--
Confidence 9999999999999999999999999999999875 88999999999999999998664 456788899988765433
Q ss_pred hhhhhhhcccCCCCcccCCcccchHHHHHHHHHHHcCCCcc-CCCCCCCCCcccccccccccCCcccchhhhccC
Q psy4112 210 LLTEKFTQAKEGPLKVTNIPYQNLLTEKFTQAACELGYRIY-DYTGIEPATEGFSKLQSTLSKGQRYSANRAYLK 283 (284)
Q Consensus 210 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~A~~~lG~~~~-D~n~~~~~~~G~~~~~~ti~~G~R~sa~~ayL~ 283 (284)
...|+.+.|.++++++|++.. +.|.+.. .|++.++.++.+|.|.|+..+|+.
T Consensus 165 --------------------~~~p~~~~~~~~~~~~G~~~~~~~~~~~~--~~~~~~~~~~~~g~r~s~~~~~~~ 217 (526)
T 3t37_A 165 --------------------EVSPLARAFIEAGASLGLPRLEGHNSGEM--IGVTPNSLNIRDGRRVTAADAWLT 217 (526)
T ss_dssp --------------------TSCHHHHHHHHHHHHTTCCBCSSSCSSCC--BSBCCCCBCEETTEECCHHHHHSC
T ss_pred --------------------cCCHHHHHHHHHHHHcCCCcccCCCCCcc--cccccccccccCCccccccccccc
Confidence 157899999999999999987 7777776 788888888899999999998874
No 4
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=3.8e-38 Score=313.58 Aligned_cols=198 Identities=30% Similarity=0.491 Sum_probs=167.8
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc---ccccccccccccccCCcccccccccCCCCCccccCCCC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE---NIYTNIPLLAHFNSLTHFNWGYKLEKNEEHPQCLGMYN 128 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~---~~~~~~p~~~~~~~~~~~~w~~~~~p~~~~~~~~~~~~ 128 (284)
.++|||||||+|.|||++|.||+|+++.+|||||+|+.. .+..++|.....+..+.++|.|.++.+ +
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~~~----------~ 73 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTTMV----------R 73 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEEEE----------E
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEEEC----------C
Confidence 457999999999999999999999866899999999873 345677877766677889999988732 3
Q ss_pred CCcc------cCcccccCCccccccccccCCChhhHHHHHhcCCCCCChhhHHHHHHHHhhccCCC----CCCCCCCccc
Q psy4112 129 DQCP------CPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYFLKSENNTSEF----LDADIHSREG 198 (284)
Q Consensus 129 ~~~~------~~rGk~lGGsS~iN~~~~~R~~~~D~d~W~~~G~~gW~~~~l~pyf~k~E~~~~~~----~~~~~hG~~G 198 (284)
+.+. ++|||+|||||+||+|+|+|+++.|||.|+++|+++|+|++|+|||+|+|++..+. .+...||.+|
T Consensus 74 r~~~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~G 153 (577)
T 3q9t_A 74 RDDYERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGG 153 (577)
T ss_dssp ETTEEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSC
T ss_pred ccccccccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCC
Confidence 4455 99999999999999999999999999999999999999999999999999987653 1234799999
Q ss_pred CceeecCCcchhhhhhhhcccCCCCcccCCcccchHHHHHHHHHHHcCCCcc-CCCCCCCCCcccccccccccCCcccch
Q psy4112 199 PLKVTNIPYQNLLTEKFTQAKEGPLKVTNIPYQNLLTEKFTQAACELGYRIY-DYTGIEPATEGFSKLQSTLSKGQRYSA 277 (284)
Q Consensus 199 pl~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~A~~~lG~~~~-D~n~~~~~~~G~~~~~~ti~~G~R~sa 277 (284)
|++++.+.+. +...++.+.|+++++++|++.. |+|++.. .|++..+.++++|.|+++
T Consensus 154 pl~v~~~~~~--------------------~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~--~G~~~~~~~~~~g~R~s~ 211 (577)
T 3q9t_A 154 PIPISHAELI--------------------DEMAPFRENLTKAWKSMGQPLIENIYDGEM--DGLTHCCDTIYRGQRSGS 211 (577)
T ss_dssp SEEEEECCCC--------------------GGGHHHHHHHHHHHHHTTCCBCSCCSSSCC--CEEEECEESEETTEECCG
T ss_pred CEEeeCCCCC--------------------cccchHHHHHHHHHHHcCCCcCCCCCCCCc--CeEEeecceecCCeEeeH
Confidence 9999876540 0034688999999999999987 8999888 899999999999999987
Q ss_pred hhhcc
Q psy4112 278 NRAYL 282 (284)
Q Consensus 278 ~~ayL 282 (284)
+ +|+
T Consensus 212 ~-~~l 215 (577)
T 3q9t_A 212 F-LFV 215 (577)
T ss_dssp G-GGS
T ss_pred H-HHH
Confidence 6 465
No 5
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=3.9e-37 Score=306.72 Aligned_cols=202 Identities=29% Similarity=0.421 Sum_probs=171.9
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCccc--cccc-cccccccccCCcccccccccCCCCCccccCCCC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDEN--IYTN-IPLLAHFNSLTHFNWGYKLEKNEEHPQCLGMYN 128 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~~--~~~~-~p~~~~~~~~~~~~w~~~~~p~~~~~~~~~~~~ 128 (284)
..+||+||||+|++|+++|.+|+++++.+|+|||+|.... ...+ +|.....+..+.++|.|.++| ++++
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p--------~~~~ 93 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP--------LINN 93 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC--------CTTS
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc--------CCCC
Confidence 3579999999999999999999997799999999998653 2334 676554444567899999887 2467
Q ss_pred CCcccCcccccCCccccccccccCCChhhHHHHHhc-CCCCCChhhHHHHHHHHhhccCCC---------CCCCCCCccc
Q psy4112 129 DQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAA-GNKGWGYDSVLKYFLKSENNTSEF---------LDADIHSREG 198 (284)
Q Consensus 129 ~~~~~~rGk~lGGsS~iN~~~~~R~~~~D~d~W~~~-G~~gW~~~~l~pyf~k~E~~~~~~---------~~~~~hG~~G 198 (284)
+.+.++|||+|||||+||+|+|+|+++.|||.|+++ |++||+|++|+|||+|+|++.++. .+..+||.+|
T Consensus 94 ~~~~~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~G 173 (587)
T 1gpe_A 94 RTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNG 173 (587)
T ss_dssp CCCEECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSS
T ss_pred ceeeeeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCC
Confidence 889999999999999999999999999999999998 999999999999999999998752 2567899999
Q ss_pred CceeecCCcchhhhhhhhcccCCCCcccCCcccchHHHHHHHHHHHcCCCcc-CCCCCCCCCccccccccccc-CCcccc
Q psy4112 199 PLKVTNIPYQNLLTEKFTQAKEGPLKVTNIPYQNLLTEKFTQAACELGYRIY-DYTGIEPATEGFSKLQSTLS-KGQRYS 276 (284)
Q Consensus 199 pl~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~A~~~lG~~~~-D~n~~~~~~~G~~~~~~ti~-~G~R~s 276 (284)
|++++++.. +. +.++..+.|.+|++++|++.. |+|++.. .|++.++.++. +|+|+|
T Consensus 174 pl~v~~~~~--------------~~------~~~~~~~~~~~a~~~~G~~~~~d~n~~~~--~G~~~~~~~~~~~g~R~s 231 (587)
T 1gpe_A 174 TVQSGARDN--------------GQ------PWSPIMKALMNTVSALGVPVQQDFLCGHP--RGVSMIMNNLDENQVRVD 231 (587)
T ss_dssp SEEEBCCCC--------------SS------CBCTHHHHHHHHHHHTTCCBSCCTTSSCC--CEEECCEESBCTTCCBCC
T ss_pred CEEEccCCC--------------cC------CCCHHHHHHHHHHHHcCCCcCCCCCCCCC--CEEEecceEECCCCcccC
Confidence 999985421 11 167899999999999999987 8999888 89998888775 799999
Q ss_pred hhhhccC
Q psy4112 277 ANRAYLK 283 (284)
Q Consensus 277 a~~ayL~ 283 (284)
++.+||.
T Consensus 232 a~~~~l~ 238 (587)
T 1gpe_A 232 AARAWLL 238 (587)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 9999995
No 6
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.8e-35 Score=292.36 Aligned_cols=200 Identities=27% Similarity=0.408 Sum_probs=171.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCccc--cccccccccccccCCcccccccccCCCCCccccCCCCCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDEN--IYTNIPLLAHFNSLTHFNWGYKLEKNEEHPQCLGMYNDQ 130 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~~--~~~~~p~~~~~~~~~~~~w~~~~~p~~~~~~~~~~~~~~ 130 (284)
.+||+||||+|.+|+++|.+|+++++.+|+|||+|.... ...++|........+.++|.|.++||. + +++.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~------~-~~~~ 84 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQE------N-GNSF 84 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCS------S-SCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccC------C-CCce
Confidence 579999999999999999999996689999999998653 334556544333356789999999987 5 6788
Q ss_pred cccCcccccCCccccccccccCCChhhHHHHHh-cCCCCCChhhHHHHHHHHhhccCCCCC-CCCCCcccCceeecCCcc
Q psy4112 131 CPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEA-AGNKGWGYDSVLKYFLKSENNTSEFLD-ADIHSREGPLKVTNIPYQ 208 (284)
Q Consensus 131 ~~~~rGk~lGGsS~iN~~~~~R~~~~D~d~W~~-~G~~gW~~~~l~pyf~k~E~~~~~~~~-~~~hG~~Gpl~v~~~~~~ 208 (284)
+.+++||+|||||+||+|+|+|+++.|||.|++ +|+++|+|++|+|||+|+|++.++ .+ ..+||.+||++++.+.+
T Consensus 85 ~~~~rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~-~~~~~~~g~~Gpl~v~~~~~- 162 (546)
T 2jbv_A 85 MRHARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDA-GPDAPHHGDSGPVHLMNVPP- 162 (546)
T ss_dssp CEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTC-BTTBTTSCBSCSEEEEECCS-
T ss_pred EEeecccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCC-CCccccCCCCCCEEEecCCC-
Confidence 999999999999999999999999999999998 799999999999999999998873 23 56899999999886555
Q ss_pred hhhhhhhhcccCCCCcccCCcccchHHHHHHHHHHHcCCCccCCCCCCCCCccccccccccc-CCcccchhhhccC
Q psy4112 209 NLLTEKFTQAKEGPLKVTNIPYQNLLTEKFTQAACELGYRIYDYTGIEPATEGFSKLQSTLS-KGQRYSANRAYLK 283 (284)
Q Consensus 209 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~A~~~lG~~~~D~n~~~~~~~G~~~~~~ti~-~G~R~sa~~ayL~ 283 (284)
..+..+.|.++++++|++..|+|+....+.|++.++.+|. +|.|+|+..+||.
T Consensus 163 ----------------------~~~~~~~~~~a~~~~G~~~~d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~ 216 (546)
T 2jbv_A 163 ----------------------KDPTGVALLDACEQAGIPRAKFNTGTTVVNGANFFQINRRADGTRSSSSVSYIH 216 (546)
T ss_dssp ----------------------CCHHHHHHHHHHHHTTCCBCCSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTG
T ss_pred ----------------------CCHHHHHHHHHHHHCCCCccCCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHH
Confidence 6789999999999999998888887611388888888999 9999999999985
No 7
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=99.95 E-value=7.9e-28 Score=235.51 Aligned_cols=193 Identities=15% Similarity=0.143 Sum_probs=139.9
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcccccccccc---ccccc-cCCcccccccccCCCCC-------
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPL---LAHFN-SLTHFNWGYKLEKNEEH------- 120 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~~~~~~~p~---~~~~~-~~~~~~w~~~~~p~~~~------- 120 (284)
..+||+||||+|++|+++|.+|++ ++.+|+|||+|..... .+|. +.... ....++|.|.++||...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~-~~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~~ 85 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFGI 85 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH-CCCcEEEEECCCCCCC--CCCcccccccccccccccccccccccccccccccccc
Confidence 467999999999999999999999 6999999999986432 2332 11111 23468999999987200
Q ss_pred --ccccCC------CCCCcccCcccccCCccccccccccCCChhhHHHHHhcCCCCCChhhHH-HHHHHHhhccCCCCCC
Q psy4112 121 --PQCLGM------YNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVL-KYFLKSENNTSEFLDA 191 (284)
Q Consensus 121 --~~~~~~------~~~~~~~~rGk~lGGsS~iN~~~~~R~~~~D~d~W~~~G~~gW~~~~l~-pyf~k~E~~~~~~~~~ 191 (284)
..+... .++.+.+++||+|||||+||+|+|+|+++.|||.|+ ++|.|++|+ |||+|+|+++++.
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~--- 158 (507)
T 1coy_A 86 NKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTGLGVN--- 158 (507)
T ss_dssp CCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCB---
T ss_pred ccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHHhCCC---
Confidence 001123 567889999999999999999999999999999995 589999999 9999999988752
Q ss_pred CCCCcccCceeecCCcchhhhhhhhcccCCCCcccCCcccchHHHHHHHHHHHcCC-----Ccc-CCCCC-------CCC
Q psy4112 192 DIHSREGPLKVTNIPYQNLLTEKFTQAKEGPLKVTNIPYQNLLTEKFTQAACELGY-----RIY-DYTGI-------EPA 258 (284)
Q Consensus 192 ~~hG~~Gpl~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~A~~~lG~-----~~~-D~n~~-------~~~ 258 (284)
+..+.. .... + ..++.+.|.++++++|+ +.. |+|++ .+.
T Consensus 159 ---~~~~~~---~~~~---------------------~-~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~ 210 (507)
T 1coy_A 159 ---NIDQAW---FEST---------------------E-WYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTK 210 (507)
T ss_dssp ---CCCHHH---HHHC---------------------G-GGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCC
T ss_pred ---CCCCcc---cccc---------------------c-cchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccC
Confidence 100000 0000 0 25788999999999999 554 55432 112
Q ss_pred CcccccccccccCCcccchhhhccC
Q psy4112 259 TEGFSKLQSTLSKGQRYSANRAYLK 283 (284)
Q Consensus 259 ~~G~~~~~~ti~~G~R~sa~~ayL~ 283 (284)
|..++.+...|.+| |+++..+||.
T Consensus 211 ~~~~g~C~~gc~~g-R~s~~~~~l~ 234 (507)
T 1coy_A 211 SGLGGEVIYGNNAG-KKSLDKTYLA 234 (507)
T ss_dssp STTTTCSTTCCSSS-BCCTTTTHHH
T ss_pred ccccccccccCCCC-CcChHHHHHH
Confidence 23333344568899 9999999984
No 8
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=99.94 E-value=2.2e-27 Score=232.12 Aligned_cols=194 Identities=20% Similarity=0.185 Sum_probs=139.5
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCccc---cccccccccccccCCcccccccccCCCCC--------
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDEN---IYTNIPLLAHFNSLTHFNWGYKLEKNEEH-------- 120 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~~---~~~~~p~~~~~~~~~~~~w~~~~~p~~~~-------- 120 (284)
..+||+||||+|++|+++|.+|++ .+.+|+|||+|.... ...+.+... ......++|.|.++||...
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~-~~~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~ 80 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVV 80 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCCCCCCCCCcccccccc-cccCccccccccccccccccccccccc
Confidence 356999999999999999999999 699999999998543 122333221 1223457999999887200
Q ss_pred ----ccccC----CCCCCcccCcccccCCccccccccccCCChhhHHHHHhcCCCCCChhhHH-HHHHHHhhccCCCCCC
Q psy4112 121 ----PQCLG----MYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVL-KYFLKSENNTSEFLDA 191 (284)
Q Consensus 121 ----~~~~~----~~~~~~~~~rGk~lGGsS~iN~~~~~R~~~~D~d~W~~~G~~gW~~~~l~-pyf~k~E~~~~~~~~~ 191 (284)
..+.+ ..++.+.+++||+|||||+||+|+|+|+++.|||.|+ ++|.|++|+ |||+|+|+++++...
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~- 155 (504)
T 1n4w_A 81 NRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSMLRVNHI- 155 (504)
T ss_dssp CCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCC-
T ss_pred cccccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHHhCCCCC-
Confidence 01111 1567889999999999999999999999999999995 789999999 999999998765210
Q ss_pred CCCCcccCceeecCCcchhhhhhhhcccCCCCcccCCcccchHHHHHHHHHHHcCC-----Ccc-CCCCC-------CCC
Q psy4112 192 DIHSREGPLKVTNIPYQNLLTEKFTQAKEGPLKVTNIPYQNLLTEKFTQAACELGY-----RIY-DYTGI-------EPA 258 (284)
Q Consensus 192 ~~hG~~Gpl~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~A~~~lG~-----~~~-D~n~~-------~~~ 258 (284)
.+.++ + . + + ..+..+.|.++++++|+ +.. |+|+. ...
T Consensus 156 -----~~~~~-~---~-------------~-------~-~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~ 205 (504)
T 1n4w_A 156 -----DTKWF-E---D-------------T-------E-WYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPK 205 (504)
T ss_dssp -----CHHHH-H---H-------------C-------G-GGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCC
T ss_pred -----Ccccc-c---C-------------C-------C-cchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccC
Confidence 00110 0 0 0 0 24688999999999999 543 55421 223
Q ss_pred CcccccccccccCCcccchhhhccC
Q psy4112 259 TEGFSKLQSTLSKGQRYSANRAYLK 283 (284)
Q Consensus 259 ~~G~~~~~~ti~~G~R~sa~~ayL~ 283 (284)
|..++.+...|.+| |+++..+||.
T Consensus 206 ~~~~G~c~~g~~~g-r~s~~~~~l~ 229 (504)
T 1n4w_A 206 SALATEVIYGNNHG-KQSLDKTYLA 229 (504)
T ss_dssp SGGGTCSTTCCSSS-BCCTTTTHHH
T ss_pred CcccccccccCCCC-ccCHHHHHHH
Confidence 34444445578999 9999999974
No 9
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=99.91 E-value=7.4e-25 Score=215.95 Aligned_cols=173 Identities=28% Similarity=0.290 Sum_probs=123.2
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCccc--ccccccccc-ccccCCcccccccccCCCCCccccCCCC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDEN--IYTNIPLLA-HFNSLTHFNWGYKLEKNEEHPQCLGMYN 128 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~~--~~~~~p~~~-~~~~~~~~~w~~~~~p~~~~~~~~~~~~ 128 (284)
..+|||||||+|++||++|.||+| +.+|||||+|+... .....|... ..+. ..+| |.+.||. .+.+
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~--~~~~-~~t~~q~------~~~~ 92 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQ--QEDD-GKTPVER------FVSE 92 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHH--SCCC-SSSSEEE------EECT
T ss_pred cCcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhcc--CCCc-CcCCCcc------ccCC
Confidence 457999999999999999999999 78999999998752 222333221 1111 1235 6677776 4556
Q ss_pred CCcccCcccccCCccccccccccCCChhhHHHHHhcCCCCCChhhHHHHHHHHhhccCCCCCCCCCCcccCceeecCCcc
Q psy4112 129 DQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYFLKSENNTSEFLDADIHSREGPLKVTNIPYQ 208 (284)
Q Consensus 129 ~~~~~~rGk~lGGsS~iN~~~~~R~~~~D~d~W~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~hG~~Gpl~v~~~~~~ 208 (284)
+.+.+++||+|||||+||+|+|+|+++.||+.+ | .+|+|++++|||+++|+..... +.
T Consensus 93 ~~~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~~~~-----------------~~- 150 (536)
T 1ju2_A 93 DGIDNVRGRVLGGTSIINAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTIVYK-----------------PN- 150 (536)
T ss_dssp TSCEEEEECBTTGGGGTSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHHCBC-----------------CC-
T ss_pred CcceeecceeccccccccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhcccCCC-----------------CC-
Confidence 778899999999999999999999999999742 2 2599999999999999864310 11
Q ss_pred hhhhhhhhcccCCCCcccCCcccchHHHHHHHHHHHcCCCcc-CCCCCCC--CCcccccccccccCCcccchhhhccC
Q psy4112 209 NLLTEKFTQAKEGPLKVTNIPYQNLLTEKFTQAACELGYRIY-DYTGIEP--ATEGFSKLQSTLSKGQRYSANRAYLK 283 (284)
Q Consensus 209 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~A~~~lG~~~~-D~n~~~~--~~~G~~~~~~ti~~G~R~sa~~ayL~ 283 (284)
..+....|.++++++|++.. ..+.... .+.|.+.+ ..+|.|+++.+ |+.
T Consensus 151 ----------------------~~~~~~~~~~a~~~~G~~~~~~~~~~~~~g~~~g~~~~---~~~g~r~s~~~-~~~ 202 (536)
T 1ju2_A 151 ----------------------SQSWQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGSTF---DNKGTRHAADE-LLN 202 (536)
T ss_dssp ----------------------CCHHHHHHHHHHHHTTCCCEEEECCBCCSEEEECEESB---CTTSBBCCGGG-GGG
T ss_pred ----------------------CCcHHHHHHHHHHHcCCCCCCCcccCCCCCceeeeEEE---CCCCeEecHHH-hhh
Confidence 34567889999999998642 1111111 00233221 25899999877 663
No 10
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=99.89 E-value=4.7e-23 Score=202.76 Aligned_cols=187 Identities=25% Similarity=0.333 Sum_probs=126.8
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCccccc--ccc-ccccccccCCcccc----c-ccccCCCCCccc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIY--TNI-PLLAHFNSLTHFNW----G-YKLEKNEEHPQC 123 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~~~~--~~~-p~~~~~~~~~~~~w----~-~~~~p~~~~~~~ 123 (284)
..+||+||||+|++|+++|.+|++ .+.+|+|||+|+..... ... +..........+++ . ....+..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~-~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----- 78 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSE-AGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNP----- 78 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCC-----
T ss_pred CCceeEEEECcCHHHHHHHHHHHh-CCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcCCCc-----
Confidence 356999999999999999999999 59999999999854311 001 00000000000000 0 0001110
Q ss_pred cCCCCCCcccCcccccCCccccccccccCCChhhHHH---HHhcCCCCCChhhHHHHHHHHhhccCCCCCCCCCCcccCc
Q psy4112 124 LGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDT---YEAAGNKGWGYDSVLKYFLKSENNTSEFLDADIHSREGPL 200 (284)
Q Consensus 124 ~~~~~~~~~~~rGk~lGGsS~iN~~~~~R~~~~D~d~---W~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~hG~~Gpl 200 (284)
........+++||+|||||+||+|+|+|+++.|||. | +.+|+|++ |||+|+|+..+. ...++.+|+.
T Consensus 79 -~~~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W----~~~w~~~~--p~~~k~e~~~~~---~~~~~~~g~~ 148 (546)
T 1kdg_A 79 -FWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGW----PSSWTNHA--PYTSKLSSRLPS---TDHPSTDGQR 148 (546)
T ss_dssp -TTBCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTC----CGGGSCCH--HHHHHHHHHSCC---BSCCSTTSCC
T ss_pred -cccccccccccceeecccccccceEEecCChHHhcCcccC----ccccCccc--HHHHHHHhcCCC---CccCCCCCCc
Confidence 011123567899999999999999999999999998 8 57899999 999999997642 1233333431
Q ss_pred eeecCCcchhhhhhhhcccCCCCcccCCcccchHHHHHHHHHHHcCCCccCCCC-CCCCCcccccccccccCCcccchhh
Q psy4112 201 KVTNIPYQNLLTEKFTQAKEGPLKVTNIPYQNLLTEKFTQAACELGYRIYDYTG-IEPATEGFSKLQSTLSKGQRYSANR 279 (284)
Q Consensus 201 ~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~A~~~lG~~~~D~n~-~~~~~~G~~~~~~ti~~G~R~sa~~ 279 (284)
+ ..+....|.++++++|++..+.+. ......|++..+.++.+|.|+|+..
T Consensus 149 ------~-----------------------~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~g~R~s~~~ 199 (546)
T 1kdg_A 149 ------Y-----------------------LEQSFNVVSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVA 199 (546)
T ss_dssp ------C-----------------------SCHHHHHHHHHHHTTTCEECCGGGSTTCCTTEEEECCBCEETTEECHHHH
T ss_pred ------c-----------------------CCHHHHHHHHHHHHCCCCcCCccCCcCCCCcEEeeeeeccCCCcccCHHH
Confidence 2 456778899999999998765332 1111268888888899999999998
Q ss_pred hccC
Q psy4112 280 AYLK 283 (284)
Q Consensus 280 ayL~ 283 (284)
+||.
T Consensus 200 ~~l~ 203 (546)
T 1kdg_A 200 TYLQ 203 (546)
T ss_dssp THHH
T ss_pred HHHH
Confidence 8874
No 11
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.42 E-value=1.7e-07 Score=78.64 Aligned_cols=36 Identities=25% Similarity=0.425 Sum_probs=32.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
++||+|||+|++|+++|..|++ .+.+|+|||+.+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~-~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTA-AGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCCCC
Confidence 4899999999999999999999 59999999997643
No 12
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.28 E-value=4.5e-07 Score=82.98 Aligned_cols=37 Identities=32% Similarity=0.598 Sum_probs=33.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
+.|||||||+|++|+++|..|++ .+.+|+|||+.+..
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~-~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAK-YGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCcEEEEeCCCCC
Confidence 46999999999999999999999 59999999997653
No 13
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.12 E-value=5.1e-06 Score=83.04 Aligned_cols=129 Identities=17% Similarity=0.109 Sum_probs=72.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcccccc------cccccc---c--------cccCC---------
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYT------NIPLLA---H--------FNSLT--------- 106 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~~~~~------~~p~~~---~--------~~~~~--------- 106 (284)
..||+||||+|++|+.+|..|++ .+.+|+|||++....... ...... . .....
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~-~G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~~~ 123 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVG-AGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLVV 123 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCCCC
T ss_pred ccCCEEEECCcHHHHHHHHHHHh-CCCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhcccccccccc
Confidence 46999999999999999999999 599999999987543110 000000 0 00000
Q ss_pred ----cccccccccCCCCCccccCCCCCCcc----cCcccccCCccccccccccCCChhhHHHHHhcCCCCC-ChhhHHHH
Q psy4112 107 ----HFNWGYKLEKNEEHPQCLGMYNDQCP----CPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGW-GYDSVLKY 177 (284)
Q Consensus 107 ----~~~w~~~~~p~~~~~~~~~~~~~~~~----~~rGk~lGGsS~iN~~~~~R~~~~D~d~W~~~G~~gW-~~~~l~py 177 (284)
..+|.-...-- ...+... ..... ...+..+||.+.++.+...|..+.+ .+..+.+.++ .++++.++
T Consensus 124 ~~~~~~~~~~~~v~l--~~g~~~~-~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e--~~~~l~~~~v~~~~~l~~~ 198 (623)
T 3pl8_A 124 DTLSPTSWQASTFFV--RNGSNPE-QDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQ--RPLLVKDDADADDAEWDRL 198 (623)
T ss_dssp CCSCTTSCCCSSCCS--CTTCCTT-CCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGG--SCCSSTTCHHHHHHHHHHH
T ss_pred ccccccccccCcEEe--ccCCCcc-cccchhhhhhcccccccCcceeeccccccCChHH--hhhhhcccCccChhhHHHH
Confidence 00111100000 0000000 00111 2257789999999999999987753 2211122223 56888999
Q ss_pred HHHHhhccCC
Q psy4112 178 FLKSENNTSE 187 (284)
Q Consensus 178 f~k~E~~~~~ 187 (284)
|.+.|.....
T Consensus 199 ~~~~~~l~~v 208 (623)
T 3pl8_A 199 YTKAESYFQT 208 (623)
T ss_dssp HHHHHHHHTE
T ss_pred HHHHHHhccc
Confidence 9998887653
No 14
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.99 E-value=4e-06 Score=75.30 Aligned_cols=36 Identities=19% Similarity=0.363 Sum_probs=31.9
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.||++|||+|++|+++|.+|++ .+++|+|+|++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar-~g~~v~lie~~~ 39 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGR-ARKQIALFDNNT 39 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 567999999999999999999999 599999999874
No 15
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.98 E-value=5.3e-06 Score=75.49 Aligned_cols=38 Identities=29% Similarity=0.483 Sum_probs=33.5
Q ss_pred CcccEEEECCChHHHHHHHHHhc-CCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSE-NPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~-~~~~~vl~lE~G~~~ 90 (284)
.++|++|||+|++|+++|.+|++ ..+.+|+|+|++...
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 46899999999999999999985 368999999998654
No 16
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.98 E-value=3.4e-06 Score=80.67 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=35.1
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCccc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDEN 91 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~~ 91 (284)
...+||||||+|++|+++|.+|++..+.+|+|||+.....
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPG 47 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCC
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCc
Confidence 4469999999999999999999974589999999987653
No 17
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.95 E-value=5.8e-06 Score=75.04 Aligned_cols=35 Identities=34% Similarity=0.580 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.++|+||||+|++|+++|.+|++ .+.+|+|||++.
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~-~G~~V~vlE~~~ 37 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAA-GGHEVLVAEAAE 37 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCC
Confidence 46999999999999999999999 599999999985
No 18
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.94 E-value=5.5e-06 Score=73.95 Aligned_cols=35 Identities=29% Similarity=0.288 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
+.||++|||+|+||+++|.+|++ .+.+|+|+|++.
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~-~g~~v~liE~~~ 37 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGR-SSLKPVMYEGFM 37 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 46999999999999999999999 599999999865
No 19
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.92 E-value=6.1e-06 Score=74.05 Aligned_cols=34 Identities=32% Similarity=0.563 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
+||++|||+|+||+++|.+|++ .+.+|+|+|++.
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~-~g~~V~liE~~~ 39 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASR-ANLKTVMIERGI 39 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 6999999999999999999999 599999999864
No 20
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.89 E-value=7.9e-06 Score=75.83 Aligned_cols=36 Identities=36% Similarity=0.549 Sum_probs=33.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++|+||||+|++|+++|..|++ .+.+|+|||++..
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~-~G~~V~vlE~~~~ 38 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAE-RGHRVLVLERHTF 38 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 46999999999999999999999 5999999999864
No 21
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.85 E-value=1.1e-05 Score=75.80 Aligned_cols=38 Identities=21% Similarity=0.324 Sum_probs=34.0
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~~ 90 (284)
..++|+||||+|.+|+++|.+|++ .+. +|+|||++...
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~-~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLAR-RGYTNVTVLDPYPVP 42 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHH-TTCCCEEEEESSCSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHH-cCCCcEEEEeCCCCC
Confidence 346999999999999999999999 588 99999998753
No 22
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.85 E-value=1.2e-05 Score=73.97 Aligned_cols=37 Identities=38% Similarity=0.581 Sum_probs=33.7
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
..++|+||||+|.+|+++|..|++ .+.+|+|||++..
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~-~G~~V~llE~~~~ 51 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAK-ENKNTALFESGTM 51 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHh-CCCcEEEEeCCCC
Confidence 567999999999999999999999 5999999999753
No 23
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.85 E-value=1.2e-05 Score=74.45 Aligned_cols=41 Identities=34% Similarity=0.443 Sum_probs=35.7
Q ss_pred CCCCCCCcccEEEECCChHHHHHHHHHhc-CCC-CeEEEeccCC
Q psy4112 47 GNKPILSEYDFVIIGGGVGGSVVANRLSE-NPK-WKVLLLESGE 88 (284)
Q Consensus 47 ~~~~~~~~~d~iivg~G~~g~~~a~~l~~-~~~-~~vl~lE~G~ 88 (284)
..+....++|+||||+|.+|+++|..|++ . + .+|+|||++.
T Consensus 14 ~~~~~~~~~dVvIIG~G~~Gl~~A~~La~~~-G~~~V~vlE~~~ 56 (405)
T 2gag_B 14 ANPEPKKSYDAIIVGGGGHGLATAYFLAKNH-GITNVAVLEKGW 56 (405)
T ss_dssp CCCCCCSEEEEEEECCSHHHHHHHHHHHHHH-CCCCEEEECSSS
T ss_pred cCCCCCCcCCEEEECcCHHHHHHHHHHHHhc-CCCcEEEEeCCC
Confidence 34445668999999999999999999998 6 7 8999999986
No 24
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.82 E-value=1.4e-05 Score=76.30 Aligned_cols=38 Identities=24% Similarity=0.458 Sum_probs=34.9
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..++|+||||+|.+|+++|.+|++ .+++|+|||+....
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~-~G~~V~vlE~~~~~ 46 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSV-DGKKVLHIDKQDHY 46 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred cccCCEEEECcCHHHHHHHHHHHH-CCCeEEEEeCCCCC
Confidence 467999999999999999999999 59999999998765
No 25
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.81 E-value=1.2e-05 Score=74.14 Aligned_cols=36 Identities=33% Similarity=0.639 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++|+||||+|++|+++|..|++ .+.+|+|||+...
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~-~G~~V~l~E~~~~ 38 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAK-YGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCCC
Confidence 35999999999999999999999 5999999999874
No 26
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.81 E-value=1.2e-05 Score=75.25 Aligned_cols=34 Identities=47% Similarity=0.781 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
+|+||||+|++|+++|.+|++ .+.+|+|||+...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~-~G~~V~vlE~~~~ 35 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTN-AGKKVLLLEGGER 35 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-cCCeEEEEecCCC
Confidence 899999999999999999999 5999999999654
No 27
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.79 E-value=1.7e-05 Score=72.73 Aligned_cols=36 Identities=28% Similarity=0.320 Sum_probs=32.7
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
..++|+||||+|.+|+++|.+|++ .+.+|+|||++.
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~-~G~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILAR-KGYSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh-CCCEEEEEeccC
Confidence 356999999999999999999999 599999999864
No 28
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.78 E-value=1.7e-05 Score=73.99 Aligned_cols=39 Identities=21% Similarity=0.337 Sum_probs=33.4
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..+.+|+||||+|++|+++|..|++ .+.+|+|||+.+..
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~-~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQ-SGIDCDVYEAVKEI 58 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCCCC
Confidence 3567999999999999999999999 59999999998754
No 29
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.77 E-value=2.1e-05 Score=72.37 Aligned_cols=35 Identities=29% Similarity=0.503 Sum_probs=32.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.++|+||||+|.+|+++|.+|++ .+.+|+|||++.
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~-~G~~V~lle~~~ 38 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAK-RGEEVTVIEKRF 38 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 46999999999999999999999 599999999984
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.75 E-value=1.9e-05 Score=71.07 Aligned_cols=35 Identities=26% Similarity=0.435 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.+|+||||+|++|+++|..|++ .+.+|+|||+.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~-~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTA-AGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHH-CCCcEEEEECCCC
Confidence 3799999999999999999999 5999999999864
No 31
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.75 E-value=1.7e-05 Score=77.00 Aligned_cols=38 Identities=26% Similarity=0.275 Sum_probs=34.3
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..++||||||+|.+|+++|.+|++ .+.+|+|||+++..
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~-~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAAR-AGADVLVLERTSGW 76 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCCCC
Confidence 457999999999999999999999 59999999998653
No 32
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.75 E-value=1.5e-05 Score=72.89 Aligned_cols=35 Identities=26% Similarity=0.476 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
++|+||||+|.+|+++|..|++ .+.+|+|||++..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~-~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATR-AGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHH-TTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-CCCeEEEEecCCC
Confidence 4899999999999999999999 5999999999864
No 33
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.74 E-value=1.9e-05 Score=72.56 Aligned_cols=35 Identities=23% Similarity=0.485 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
++|+||||+|.+|+++|..|++ .+.+|+|||++..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~-~G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAK-QGVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCC
Confidence 5899999999999999999999 5999999999754
No 34
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.74 E-value=2e-05 Score=73.38 Aligned_cols=36 Identities=28% Similarity=0.505 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++|+||||+|++|+++|..|++ .+.+|+|||+...
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~-~G~~V~v~E~~~~ 39 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNK-SGFKVKIVEKQKF 39 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT-TTCCEEEECSSCS
T ss_pred ccCcEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCCC
Confidence 35999999999999999999999 5999999999863
No 35
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.73 E-value=2.4e-05 Score=70.01 Aligned_cols=38 Identities=32% Similarity=0.552 Sum_probs=33.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|++|||+|++|+.+|..|++.++.+|+|||++...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~ 75 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSP 75 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCC
Confidence 45899999999999999999998338999999998654
No 36
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.71 E-value=2.9e-05 Score=77.83 Aligned_cols=38 Identities=29% Similarity=0.470 Sum_probs=33.6
Q ss_pred CCCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 50 PILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 50 ~~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
+....+||||||+|.+|+++|..|++ .+.+|+|||++.
T Consensus 268 ~~~~~~DVvIIGgGiaGlsaA~~La~-~G~~V~vlEk~~ 305 (676)
T 3ps9_A 268 TGSSKREAAIIGGGIASALLSLALLR-RGWQVTLYCADE 305 (676)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSS
T ss_pred ccCCCCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 34456999999999999999999999 599999999964
No 37
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.70 E-value=2.5e-05 Score=74.24 Aligned_cols=39 Identities=26% Similarity=0.454 Sum_probs=32.6
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
...++|+||||+|++|+++|..|++ .+.+|+|||+++..
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~-~G~~V~llEk~~~~ 62 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGK-RGRRVLVIDHARAP 62 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHH-CCCcEEEEeCCCCC
Confidence 3567999999999999999999999 59999999998753
No 38
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.69 E-value=2.4e-05 Score=72.96 Aligned_cols=35 Identities=34% Similarity=0.466 Sum_probs=32.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
+|+||||+|.+|+++|.+|++ .+.+|+|||++...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~-~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSK-AGHEVEVFERLPIT 35 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHh-CCCceEEEeCCCCC
Confidence 489999999999999999999 59999999998654
No 39
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.65 E-value=3e-05 Score=72.87 Aligned_cols=39 Identities=26% Similarity=0.480 Sum_probs=34.3
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..++|++|||+|.+|+++|.+|++.++.+|+|||++...
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 346999999999999999999998338999999998754
No 40
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.65 E-value=3.2e-05 Score=76.15 Aligned_cols=35 Identities=26% Similarity=0.452 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+||+||||+|++|+.+|..|++ .+.+|+|||++.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~-~G~~V~LlEk~d 51 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQV-RGIQTGLVEMND 51 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHT-TTCCEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-CCCcEEEEECCC
Confidence 46999999999999999999999 599999999984
No 41
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.65 E-value=3.5e-05 Score=74.67 Aligned_cols=39 Identities=26% Similarity=0.386 Sum_probs=35.7
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
+.++||+||||+|.+|+++|.+|++ .+.+|+|||+++..
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~-~g~~v~~~e~~~~~ 55 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSH-YGKKILVLDRNPYY 55 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHH-CCCcEEEEeccCCC
Confidence 4678999999999999999999999 59999999999765
No 42
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.63 E-value=3e-05 Score=73.14 Aligned_cols=37 Identities=24% Similarity=0.392 Sum_probs=33.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|+||||+|++|+++|..|++ .+.+|+|||+++..
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~-~G~~V~vlEk~~~~ 39 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAK-LGKSVTVFDNGKKI 39 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHh-CCCCEEEEeCCCCC
Confidence 35999999999999999999999 59999999998753
No 43
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.63 E-value=3.4e-05 Score=73.34 Aligned_cols=35 Identities=46% Similarity=0.691 Sum_probs=32.6
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
++|+||||+|++|+++|..|++ .+.+|+|||+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~-~G~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR-RGLKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS-SSCCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 5899999999999999999999 5999999999864
No 44
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.62 E-value=4.1e-05 Score=66.37 Aligned_cols=34 Identities=29% Similarity=0.445 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
+||++|||+|++|+.+|..|++ .+.+|+|||++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-~g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-KGVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 5899999999999999999999 599999999974
No 45
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.60 E-value=4.1e-05 Score=71.21 Aligned_cols=36 Identities=39% Similarity=0.653 Sum_probs=32.6
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
++|++|||+|++|+++|.+|++ .+.+|+|||++...
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~-~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKK-LNKKVLVIEKRNHI 36 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGG-GTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-CCCcEEEEecCCCC
Confidence 3799999999999999999999 48999999998654
No 46
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.59 E-value=4.1e-05 Score=69.89 Aligned_cols=36 Identities=31% Similarity=0.533 Sum_probs=32.3
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
..++|+||||+|.+|+++|.+|++ +.+|+|||++..
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La~--G~~V~vlE~~~~ 42 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLSA--HGRVVVLEREAQ 42 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHTT--TSCEEEECSSSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHhC--CCCEEEEECCCC
Confidence 346899999999999999999993 899999999854
No 47
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.58 E-value=4.6e-05 Score=71.38 Aligned_cols=34 Identities=24% Similarity=0.457 Sum_probs=31.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
|+||||+|.+|+++|.+|++ .+.+|+|||+....
T Consensus 2 dVvVIGaGiaGLsaA~~La~-~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR-NGHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCCCC
Confidence 89999999999999999999 59999999997654
No 48
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.58 E-value=4.6e-05 Score=72.36 Aligned_cols=39 Identities=28% Similarity=0.453 Sum_probs=32.5
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
....+|+||||+|.+|+++|..|++ .+.+|+|||+....
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~-~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRS-RGTDAVLLESSARL 51 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHT-TTCCEEEECSSSSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHH-CCCCEEEEEcCCCC
Confidence 4556999999999999999999999 59999999998754
No 49
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.58 E-value=3.4e-05 Score=73.69 Aligned_cols=35 Identities=37% Similarity=0.526 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-+|||||+|.+|+++|.+|++ .+++|+|||+....
T Consensus 2 k~VvVIGaG~~GL~aA~~La~-~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQA-AGIPVLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHH-TTCCEEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHH-CCCcEEEEccCCCC
Confidence 479999999999999999999 59999999997654
No 50
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.57 E-value=5.1e-05 Score=70.45 Aligned_cols=37 Identities=30% Similarity=0.554 Sum_probs=33.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|+||||+|++|+++|..|++ .+.+|+|||+.+..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~-~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGR-QGHRVVVVEQARRE 41 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHh-CCCcEEEEeCCCCC
Confidence 35899999999999999999999 59999999998643
No 51
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.57 E-value=5.6e-05 Score=76.03 Aligned_cols=37 Identities=27% Similarity=0.278 Sum_probs=33.2
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
...+||||||+|.+|+++|..|++ .+.+|+|||++..
T Consensus 262 ~~~~DVvIIGgGiaGlsaA~~La~-~G~~V~vlEk~~~ 298 (689)
T 3pvc_A 262 TRCDDIAIIGGGIVSALTALALQR-RGAVVTLYCADAQ 298 (689)
T ss_dssp SCCSSEEEECCSHHHHHHHHHHHT-TTCCEEEEESSSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHH-CCCcEEEEeCCCc
Confidence 346999999999999999999999 5999999999753
No 52
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.57 E-value=4.8e-05 Score=72.40 Aligned_cols=36 Identities=39% Similarity=0.651 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++|+||||+|++|+++|..|++ .+.+|+|||+.+.
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~-~G~~V~llEk~~~ 60 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAE-EGANVLLLDKGNK 60 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 45999999999999999999999 5899999998864
No 53
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.57 E-value=4.3e-05 Score=71.12 Aligned_cols=37 Identities=35% Similarity=0.536 Sum_probs=33.2
Q ss_pred cccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
+||+||||+|++|+.+|..|++. ++.+|+|||++...
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~ 116 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAP 116 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCcc
Confidence 58999999999999999999984 48999999998653
No 54
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.56 E-value=3.8e-05 Score=71.94 Aligned_cols=37 Identities=35% Similarity=0.539 Sum_probs=32.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~ 89 (284)
.++|+||||+|.+|+++|..|++. ++.+|+|||++..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 459999999999999999999982 2899999999753
No 55
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.56 E-value=6.5e-05 Score=69.97 Aligned_cols=37 Identities=35% Similarity=0.486 Sum_probs=33.5
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
...+|+||||+|++|+++|..|++ .+.+|+|||+.+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-NGIDVSVYERDND 60 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-TTCEEEEEECSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCCC
Confidence 456899999999999999999999 5999999999864
No 56
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.56 E-value=5.2e-05 Score=73.33 Aligned_cols=35 Identities=31% Similarity=0.616 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
+++|+||||+|.+|+.+|..|++ .+.+|+|||++.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~-~G~~V~llE~~~ 36 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAG-RGLSVLMLEAQD 36 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHh-CCCCEEEEECCC
Confidence 35999999999999999999999 599999999975
No 57
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.56 E-value=5.4e-05 Score=74.65 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=33.9
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
...+|+||||+|++|+.+|..|++ .+.+|+|||++...
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~-~G~kV~VlEr~~~~ 142 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQ-MGFNPIIVERGKEV 142 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHH-TTCCCEEECSSCCH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH-CCCeEEEEEccCcc
Confidence 345899999999999999999999 69999999999643
No 58
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.55 E-value=5.2e-05 Score=70.90 Aligned_cols=37 Identities=35% Similarity=0.485 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCe-EEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWK-VLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~-vl~lE~G~~~ 90 (284)
..+|+||||+|++|+++|..|++ .+.+ |+|||+.+..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~-~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQ-AGIGKVTLLESSSEI 40 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHh-CCCCeEEEEECCCCc
Confidence 35899999999999999999999 5999 9999998653
No 59
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.55 E-value=4.5e-05 Score=72.93 Aligned_cols=35 Identities=31% Similarity=0.542 Sum_probs=32.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+||++|||+|++|+++|.+|++ .+.+|+|||++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~-~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQ-LGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH-HTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHh-CCCEEEEEeCCC
Confidence 46999999999999999999999 599999999986
No 60
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.54 E-value=4.6e-05 Score=70.54 Aligned_cols=35 Identities=23% Similarity=0.370 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
++|+||||+|++|+++|..|++ .+.+|+|||+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~-~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHK-AGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-HTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCCC
Confidence 4899999999999999999999 5999999998864
No 61
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.54 E-value=4.3e-05 Score=75.57 Aligned_cols=36 Identities=36% Similarity=0.518 Sum_probs=32.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCC------CCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENP------KWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~------~~~vl~lE~G~~~ 90 (284)
++|+||||+|++|+++|.+|++ . +.+|+|||++...
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~-~~~~~~~G~~V~vlEk~~~~ 76 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQ-LAAQHEKDLRVCLVEKAAHI 76 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-HHHHTTCCCCEEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-cccccCCCCcEEEEeCCCCC
Confidence 5999999999999999999998 4 8999999998654
No 62
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.54 E-value=6.5e-05 Score=72.82 Aligned_cols=39 Identities=23% Similarity=0.357 Sum_probs=34.8
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
...++||||||+|++|+++|..|++ .+.+|+|||+.+..
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~-~G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL-AGVEVVVLERLVER 46 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCCC-
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCCCC
Confidence 4678999999999999999999999 59999999998654
No 63
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.53 E-value=7e-05 Score=70.92 Aligned_cols=38 Identities=32% Similarity=0.637 Sum_probs=34.3
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
...+|++|||+|++|+++|.+|++ .+.+|+|||+.+..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~-~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLAS-SGQRVLIVDRRPHI 64 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHH-CCCceEEEeccCCC
Confidence 457999999999999999999999 49999999998654
No 64
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.53 E-value=5.4e-05 Score=73.33 Aligned_cols=36 Identities=39% Similarity=0.648 Sum_probs=33.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++|+||||+|++|+++|..|++ .+.+|+|||+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~-~G~~V~liE~~~~ 41 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM-RGHRVLLLEREAF 41 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-TTCCEEEECSSCS
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-CCCCEEEEccCCC
Confidence 46999999999999999999999 5999999999863
No 65
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.52 E-value=6.2e-05 Score=73.94 Aligned_cols=37 Identities=27% Similarity=0.348 Sum_probs=33.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++||||||+|++|+++|..|++ .+.+|+|||+.+..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~-~G~~V~vlEk~~~~ 161 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATD-SGAKVILIEKEPVI 161 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCCCC
Confidence 36999999999999999999999 59999999998754
No 66
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.52 E-value=6.9e-05 Score=69.24 Aligned_cols=37 Identities=27% Similarity=0.416 Sum_probs=33.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..+|+||||+|++|+++|..|++ .+.+|+|||+....
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~-~G~~v~viE~~~~~ 46 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQ-NGWDVRLHEKSSEL 46 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCCEEEEecCCCC
Confidence 45899999999999999999999 59999999998654
No 67
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.51 E-value=7.7e-05 Score=69.67 Aligned_cols=37 Identities=22% Similarity=0.326 Sum_probs=33.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCC-CeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPK-WKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~-~~vl~lE~G~~~ 90 (284)
..+|+||||+|.+|+++|.+|++ .+ .+|+|+|+....
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~-~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ-AGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH-TTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHh-CCCCcEEEEECCCCC
Confidence 56899999999999999999999 48 899999997654
No 68
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.51 E-value=6.6e-05 Score=74.08 Aligned_cols=35 Identities=37% Similarity=0.558 Sum_probs=32.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.++|+||||+|.+|+.+|..|++ .+.+|+|||++.
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~-rG~~V~LlE~~~ 65 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAA-SGIKTGLIEMQD 65 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 35999999999999999999999 599999999985
No 69
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.51 E-value=7.6e-05 Score=71.24 Aligned_cols=39 Identities=28% Similarity=0.459 Sum_probs=34.7
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
+...+|++|||+|.+|+++|..|++ .+.+|+|||+....
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~-~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQK-AGYKVTVLEARTRP 46 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHH-CCCCEEEEeccCCC
Confidence 3557899999999999999999999 58999999998754
No 70
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.50 E-value=6.8e-05 Score=72.40 Aligned_cols=37 Identities=30% Similarity=0.602 Sum_probs=33.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..+|+||||+|.+|+++|.+|++ .+.+|+|||+....
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~-~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHD-SGLNVVVLEARDRV 39 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCCCC
Confidence 45899999999999999999999 59999999997654
No 71
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.49 E-value=6.2e-05 Score=72.77 Aligned_cols=37 Identities=27% Similarity=0.456 Sum_probs=33.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCC-CeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPK-WKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~-~~vl~lE~G~~~ 90 (284)
..+|+||||+|.+|+++|.+|++ .+ .+|+|||+....
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~-~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQ-NGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHH-TTCCSEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-cCCCCEEEEeCCCCC
Confidence 46899999999999999999999 58 999999998654
No 72
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.49 E-value=8.4e-05 Score=69.15 Aligned_cols=36 Identities=19% Similarity=0.316 Sum_probs=33.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
..+|++|||+|++|+++|..|++ .+.+|+|+|+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-AGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-CCCCEEEEecCCC
Confidence 35899999999999999999999 5999999999865
No 73
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.48 E-value=5.8e-05 Score=74.14 Aligned_cols=38 Identities=13% Similarity=0.217 Sum_probs=34.2
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..++||||||+|++|+++|..|++ .+.+|+|||+.+..
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~-~G~~V~vlEk~~~~ 156 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKK-AGANVILVDKAPFS 156 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHH-HTCCEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCCCC
Confidence 357999999999999999999999 59999999998754
No 74
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.48 E-value=4.1e-05 Score=72.01 Aligned_cols=36 Identities=28% Similarity=0.438 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHhcCCC------CeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPK------WKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~------~~vl~lE~G~~~ 90 (284)
.+|+||||+|.+|+++|.+|++. + .+|+|||+....
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-IKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HTTTTCSEEEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-ccccCCCCCEEEEECCCCC
Confidence 48999999999999999999994 6 899999997543
No 75
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.48 E-value=7.4e-05 Score=71.77 Aligned_cols=34 Identities=26% Similarity=0.402 Sum_probs=31.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
.+||+||||+|++|+++|.+|++ .+.+|+|||++
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~-~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGA-LGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHh-CcCEEEEEeCC
Confidence 36999999999999999999999 59999999984
No 76
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.47 E-value=7.2e-05 Score=68.01 Aligned_cols=35 Identities=23% Similarity=0.427 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHhcC--CCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSEN--PKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~--~~~~vl~lE~G~~ 89 (284)
+|++|||+|++|+++|..|++. .+.+|+|+|++..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 6999999999999999999982 3899999998754
No 77
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.46 E-value=8.4e-05 Score=65.28 Aligned_cols=34 Identities=35% Similarity=0.703 Sum_probs=31.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+|++|||+|++|+.+|..|++ .+.+|+|+|++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGR-ARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 3899999999999999999999 589999999864
No 78
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.46 E-value=4.9e-05 Score=71.75 Aligned_cols=33 Identities=30% Similarity=0.532 Sum_probs=31.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCC-CeEEEecc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPK-WKVLLLES 86 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~-~~vl~lE~ 86 (284)
.++|+||||+|.+|+++|.+|++. + .+|+|||+
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~-G~~~V~vlE~ 55 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVW-SGGSVLVVDA 55 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH-HCSCEEEEES
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEcc
Confidence 579999999999999999999994 7 89999999
No 79
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.46 E-value=7.9e-05 Score=70.60 Aligned_cols=35 Identities=37% Similarity=0.592 Sum_probs=31.7
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC--eEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW--KVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G~~~ 90 (284)
.|++|||+|.+|+++|.+|++ .+. +|+|||+....
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~-~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR-APCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT-SSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHh-CCCCCcEEEEeCCCCC
Confidence 699999999999999999999 488 99999997643
No 80
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.46 E-value=8.3e-05 Score=66.86 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=32.5
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.+|++|||+|++|+.+|..|++ .+.+|+|||+.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-~g~~v~vie~~~~ 37 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-SGLSYVILDAEAS 37 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-SSCCEEEECCSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 5899999999999999999999 5999999999864
No 81
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.45 E-value=7.5e-05 Score=74.00 Aligned_cols=36 Identities=31% Similarity=0.363 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++||||||+|.+|+++|..|++ .+.+|+|||++..
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~-~G~~V~vlEK~~~ 41 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQ-SGQTCALLSKVFP 41 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCG
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-CCCcEEEEecCCC
Confidence 46999999999999999999999 5999999999854
No 82
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.45 E-value=9.8e-05 Score=60.86 Aligned_cols=33 Identities=36% Similarity=0.676 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
||++|||+|++|+.+|..|++ .+.+|+|||+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~-~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLAR-AGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 799999999999999999999 599999999986
No 83
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.45 E-value=7.9e-05 Score=66.70 Aligned_cols=36 Identities=25% Similarity=0.253 Sum_probs=32.4
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
...+|++|||+|++|+.+|..|++ .+.+|+|||+.+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~vie~~~ 55 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLAR-AEIKPILYEGMM 55 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH-TTCCCEEECCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 457999999999999999999999 599999999954
No 84
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.44 E-value=8.8e-05 Score=69.91 Aligned_cols=37 Identities=24% Similarity=0.395 Sum_probs=33.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|+||||+|++|+++|.+|++ .+.+|+|||+....
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~-~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRK-AGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCcEEEEECCCCC
Confidence 35899999999999999999999 59999999998654
No 85
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.44 E-value=9.3e-05 Score=73.06 Aligned_cols=37 Identities=30% Similarity=0.389 Sum_probs=31.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++||||||+|++|+++|..|++ .+.+|+|||+.+..
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~-~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRA-GGVGALVLEKLVEP 84 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHH-TTCCEEEEBSCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEcCCCCC
Confidence 46999999999999999999999 59999999998654
No 86
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.44 E-value=9.4e-05 Score=71.66 Aligned_cols=38 Identities=24% Similarity=0.372 Sum_probs=33.9
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..++||||||+|++|+++|..|++ .+.+|+|||+.+..
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~-~G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRL-GGVDVMVLEQLPQR 47 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESCSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCCCC
Confidence 467999999999999999999999 59999999997654
No 87
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.43 E-value=0.0001 Score=66.05 Aligned_cols=35 Identities=26% Similarity=0.490 Sum_probs=32.1
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
...+|++|||+|++|+.+|..|++ .+.+|+|||+.
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 48 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAAR-SGFSVAILDKA 48 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred cCCCcEEEECcCHHHHHHHHHHHh-CCCcEEEEeCC
Confidence 456999999999999999999999 58999999985
No 88
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.43 E-value=0.00011 Score=73.03 Aligned_cols=37 Identities=30% Similarity=0.407 Sum_probs=33.5
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
...+|+||||+|++|+++|..|++ .+.+|+|||+...
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-LGHDVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-CCCCEEEEcCCCC
Confidence 446999999999999999999999 5999999999854
No 89
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.43 E-value=0.00011 Score=69.62 Aligned_cols=38 Identities=24% Similarity=0.383 Sum_probs=34.5
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..++|+||||+|.+|+++|.+|++ .+.+|+|+|+....
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~-~g~~v~~~e~~~~~ 41 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSV-NGKKVLHMDRNPYY 41 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHH-CCCcEEEEecCCCc
Confidence 457999999999999999999999 59999999998654
No 90
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.43 E-value=9.7e-05 Score=71.72 Aligned_cols=37 Identities=30% Similarity=0.471 Sum_probs=33.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++||||||+|++|+++|..|++ .+.+|+|||+.+..
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~-~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLAR-QGVRVLVVERRPGL 40 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHT-TTCCEEEECSSSSC
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCCCC
Confidence 46999999999999999999999 59999999998754
No 91
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.43 E-value=0.0001 Score=67.23 Aligned_cols=37 Identities=27% Similarity=0.302 Sum_probs=32.9
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
...+|++|||+|++|+.+|..|++ .+.+|+|||+.+.
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~~ 48 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGM-NNISCRIIESMPQ 48 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh-CCCCEEEEecCCC
Confidence 346999999999999999999999 5999999999764
No 92
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.42 E-value=0.0001 Score=65.75 Aligned_cols=36 Identities=33% Similarity=0.338 Sum_probs=32.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
..+|++|||+|++|+.+|..|++ .+.+|+|||+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~~ 41 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGM-RQASVKIIESLPQ 41 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHH-CCCCEEEEEcCCC
Confidence 35899999999999999999999 5999999999764
No 93
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.42 E-value=0.00011 Score=65.97 Aligned_cols=35 Identities=40% Similarity=0.648 Sum_probs=32.4
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
...+|++|||+|++|+.+|..|++ .+.+|+|||++
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 40 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGR-AQLSTLILEKG 40 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred cccCCEEEECCCHHHHHHHHHHHH-cCCcEEEEeCC
Confidence 456999999999999999999999 58999999997
No 94
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.42 E-value=6.2e-05 Score=68.62 Aligned_cols=32 Identities=25% Similarity=0.275 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCC------CeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPK------WKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~------~~vl~lE~G~ 88 (284)
|+||||+|.+|+++|..|++. + .+|+|||++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCC
Confidence 899999999999999999994 4 8999999985
No 95
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.42 E-value=0.00011 Score=65.98 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=32.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
..+|++|||+|++|+.+|..|++ .+.+|+|+|+.+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~~ 39 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGM-RGLSFRFVDPLPE 39 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCCC
Confidence 46999999999999999999998 5999999999764
No 96
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.42 E-value=9.8e-05 Score=65.54 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=31.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
..+|++|||+|++|+.+|.+|++ .+.+|+|||+.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 47 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSAR-YMLKTLVIGET 47 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred CccCEEEECccHHHHHHHHHHHH-CCCcEEEEecc
Confidence 36999999999999999999999 59999999995
No 97
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.41 E-value=0.0001 Score=70.25 Aligned_cols=33 Identities=33% Similarity=0.502 Sum_probs=31.1
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
+||+||||+|++|+++|.+|++ .+.+|+|||++
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~-~G~~V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAA-LGKKVAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-TTCCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-CCCEEEEEeCC
Confidence 5999999999999999999999 59999999984
No 98
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.41 E-value=9.5e-05 Score=72.46 Aligned_cols=36 Identities=33% Similarity=0.585 Sum_probs=32.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++||||||+|.+|+++|..|++ +.+|+|||++...
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~--G~~V~vlEk~~~~ 42 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD--QHQVIVLSKGPVT 42 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT--TSCEEEECSSCTT
T ss_pred CCCCEEEECccHHHHHHHHHHhc--CCcEEEEECCCCC
Confidence 46999999999999999999998 8999999998743
No 99
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.40 E-value=9.4e-05 Score=73.92 Aligned_cols=37 Identities=27% Similarity=0.288 Sum_probs=33.3
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
..++||||||+|.+|+.+|..|++ .+.+|+|||++..
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~-~G~~V~vlEK~~~ 52 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSE-AGFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCG
T ss_pred cccCCEEEECccHHHHHHHHHHHH-CCCcEEEEeccCC
Confidence 346999999999999999999999 5999999999753
No 100
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.40 E-value=0.0001 Score=74.10 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=32.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++||||||+|.+|+++|..|++ .+.+|+|||++..
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae-~G~~V~vlEK~~~ 39 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQ-KGLSTIVLSLIPV 39 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHT-TTCCEEEECSSCG
T ss_pred ccccEEEECchHHHHHHHHHHHH-CCCcEEEEeccCC
Confidence 36899999999999999999999 5999999999763
No 101
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.39 E-value=0.00011 Score=70.57 Aligned_cols=37 Identities=32% Similarity=0.577 Sum_probs=31.5
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
...||++|||+|++|+++|.+|++ .+.+|+|||+.+.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~-~G~~V~liEk~~~ 59 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQ-LGMKVAVVEKRST 59 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHH-CCCeEEEEecCCC
Confidence 346999999999999999999999 5999999998653
No 102
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.39 E-value=0.0001 Score=73.95 Aligned_cols=35 Identities=31% Similarity=0.479 Sum_probs=32.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+||+||||+|++|+.+|..|++ .+.+|+|||.+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr-~G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAAR-MGQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHh-CCCCEEEEeecc
Confidence 56999999999999999999999 599999999874
No 103
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.39 E-value=0.00011 Score=70.29 Aligned_cols=35 Identities=34% Similarity=0.629 Sum_probs=32.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
+|+||||+|.+|+++|.+|++ .+.+|+|||+....
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~-~g~~v~v~E~~~~~ 74 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTV-AGFKTLLLEARDRI 74 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHH-TTCCEEEECSSSBS
T ss_pred CCEEEECCcHHHHHHHHHHHH-CCCCEEEEeCCCCC
Confidence 899999999999999999999 59999999997654
No 104
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.39 E-value=0.00011 Score=70.35 Aligned_cols=36 Identities=36% Similarity=0.594 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.+||+||||+|++|+++|.+|++ .+.+|+|||+.+.
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~-~G~~V~liEk~~~ 38 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAK-AKYNVLMADPKGE 38 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECTTSS
T ss_pred ccceEEEECCCHHHHHHHHHHHh-CCCeEEEEECCCC
Confidence 35999999999999999999999 5999999996543
No 105
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.37 E-value=0.00013 Score=69.84 Aligned_cols=38 Identities=26% Similarity=0.350 Sum_probs=33.3
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
...+|+||||+|.+|+++|..|++ .+.+|+|+|+....
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~-~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKI-HGLNVTVFEAEGKA 48 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHT-TSCEEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEEeCCCC
Confidence 346899999999999999999999 59999999998764
No 106
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.37 E-value=9.7e-05 Score=69.95 Aligned_cols=34 Identities=18% Similarity=0.234 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+|+||||+|++|+++|..|++ .+.+|+|||+..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~-~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQ-HDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHH-TTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 4799999999999999999999 599999999886
No 107
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.36 E-value=0.00012 Score=70.66 Aligned_cols=34 Identities=32% Similarity=0.438 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.||+||||+|++|+++|.+|++ .+.+|+|||++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~-~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKK-HTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-TCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCC
Confidence 5999999999999999999999 599999999875
No 108
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.36 E-value=0.00015 Score=68.13 Aligned_cols=35 Identities=26% Similarity=0.454 Sum_probs=32.6
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
...+|++|||+|++|+++|.+|.+ .+.+|+|+|+.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~-~G~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTR-AGHDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHH-TSCEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHH-CCCcEEEEecc
Confidence 456899999999999999999999 59999999998
No 109
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.34 E-value=0.00013 Score=70.95 Aligned_cols=36 Identities=31% Similarity=0.464 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHhc---CCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSE---NPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~---~~~~~vl~lE~G~~ 89 (284)
..+||||||+|++|+++|..|++ . +.+|+|||+...
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQ-QANITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCS-SCEEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCC-CCEEEEECCCCC
Confidence 35899999999999999999998 5 899999999653
No 110
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.34 E-value=0.00015 Score=65.99 Aligned_cols=35 Identities=31% Similarity=0.455 Sum_probs=31.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~ 88 (284)
.++|++|||+|++|+.+|.+|++ .+. +|+|||+..
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~-~g~~~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKD-FGITDVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-cCCCcEEEEecCC
Confidence 35899999999999999999999 488 999999985
No 111
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.33 E-value=0.00011 Score=74.05 Aligned_cols=37 Identities=27% Similarity=0.482 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcC-----CCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSEN-----PKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~-----~~~~vl~lE~G~~ 89 (284)
.++||||||+|.+|+.+|..|++. ++.+|+|||++..
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 369999999999999999999983 2899999998753
No 112
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.33 E-value=0.00014 Score=71.15 Aligned_cols=37 Identities=30% Similarity=0.430 Sum_probs=33.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++||||||+|++|+++|..|++ .+.+|+|||+.+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~-~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAH-RQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCCCC
Confidence 46899999999999999999999 59999999998654
No 113
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.33 E-value=0.00013 Score=74.79 Aligned_cols=36 Identities=33% Similarity=0.610 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~ 89 (284)
.++|+||||+|.+|+++|..|++ .+. +|+|||++..
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~-~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVT-RGWNNITVLDQGPL 39 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHH-TTCCCEEEECSSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHh-CCCCcEEEEeCCCC
Confidence 46899999999999999999999 487 9999999864
No 114
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.33 E-value=0.00017 Score=71.89 Aligned_cols=38 Identities=26% Similarity=0.427 Sum_probs=34.1
Q ss_pred CCcccEEEECCChHHHHHHHHHhc-CCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSE-NPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~-~~~~~vl~lE~G~~~ 90 (284)
..++||||||+|++|+++|..|++ . +.+|+|||+.+..
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~~~ 68 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKEGP 68 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSSSC
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 457999999999999999999998 6 8999999997643
No 115
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.32 E-value=0.00013 Score=72.98 Aligned_cols=35 Identities=29% Similarity=0.392 Sum_probs=32.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+||+||||+|++|+.+|..|++ .+.+|+|||.+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr-~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAAR-MGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCCEEEEEecc
Confidence 46999999999999999999999 599999999874
No 116
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.32 E-value=0.00015 Score=72.62 Aligned_cols=37 Identities=35% Similarity=0.438 Sum_probs=32.6
Q ss_pred CcccEEEECCChHHHHHHHHHh---cCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLS---ENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~---~~~~~~vl~lE~G~~ 89 (284)
.++||||||+|.+|+++|..|+ +..+.+|+|||++..
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 4699999999999999999999 424899999999864
No 117
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.32 E-value=0.00015 Score=64.49 Aligned_cols=32 Identities=31% Similarity=0.454 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESG 87 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G 87 (284)
||++|||+|++|+.+|..|++ .+. +|+|||+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-GGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-TTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-CCCCcEEEEcCC
Confidence 799999999999999999999 589 99999985
No 118
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.32 E-value=0.00014 Score=67.19 Aligned_cols=38 Identities=32% Similarity=0.514 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
.++|++|||+|++|+.+|..|++. ++.+|+|+|++...
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ 102 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccc
Confidence 357999999999999999999983 38999999997644
No 119
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.31 E-value=0.00013 Score=69.17 Aligned_cols=35 Identities=34% Similarity=0.537 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCC--CeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPK--WKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~--~~vl~lE~G~~ 89 (284)
.+|+||||+|.+|+++|.+|++. + .+|+|||+...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-FPDLNITLLEAGER 40 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-CTTSEEEEECSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCCCEEEEECCCC
Confidence 58999999999999999999994 7 99999999654
No 120
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.30 E-value=0.00016 Score=69.58 Aligned_cols=34 Identities=29% Similarity=0.536 Sum_probs=31.4
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEecc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLES 86 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~ 86 (284)
..+||+||||+|++|+++|.+|++ .+.+|+|||+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~-~G~~V~liEk 37 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQ-LGKKVAVADY 37 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEEe
Confidence 356999999999999999999999 5999999997
No 121
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.30 E-value=0.00017 Score=69.05 Aligned_cols=35 Identities=37% Similarity=0.629 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
..+|+||||+|++|+.+|.+|++ .+.+|+|+|++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAA-FGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHh-CCCcEEEEcCCC
Confidence 46999999999999999999999 699999999874
No 122
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.30 E-value=0.00016 Score=68.79 Aligned_cols=35 Identities=40% Similarity=0.652 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
..+|++|||+|++|+.+|.+|++ .+.+|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAM-YGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT-TTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHh-CCCeEEEEcCCC
Confidence 46999999999999999999999 699999999874
No 123
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.29 E-value=0.00016 Score=71.10 Aligned_cols=34 Identities=38% Similarity=0.708 Sum_probs=31.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
+||+||||+|++|.++|.++++ .+.+|+|||...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~-~G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAA-HGARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-TTCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 4999999999999999999999 599999999643
No 124
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.29 E-value=0.00023 Score=69.15 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=34.1
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
....+|+||||+|++|+.+|.+|++ .+.+|+|||++.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~-~G~~V~liE~~~ 76 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRA-MGGRQLIVDRWP 76 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 4567999999999999999999999 499999999987
No 125
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.28 E-value=0.00018 Score=68.93 Aligned_cols=34 Identities=29% Similarity=0.468 Sum_probs=31.2
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEecc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLES 86 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~ 86 (284)
..+||+||||+|++|+++|.+|++ .+.+|+|||+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~-~G~~V~liEk 40 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVL-NGARVACLDF 40 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH-CCCEEEEEEe
Confidence 356999999999999999999999 5999999994
No 126
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.28 E-value=0.0002 Score=69.29 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=33.6
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
...+|++|||+|++|+.+|..|++ .+.+|+|||+.+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~-~G~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELAL-LGARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHH-CCCeEEEEEeccc
Confidence 456899999999999999999999 5999999999864
No 127
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.28 E-value=0.0002 Score=69.63 Aligned_cols=37 Identities=35% Similarity=0.555 Sum_probs=32.9
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
....||+||||+|++|+++|.+|++ .+.+|+|||+.+
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~-~G~~V~liEk~~ 65 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQ-YGKKVMVLDFVT 65 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeccC
Confidence 3457999999999999999999999 599999999843
No 128
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.28 E-value=0.00018 Score=68.87 Aligned_cols=36 Identities=36% Similarity=0.679 Sum_probs=32.6
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
...||+||||+|++|+.+|.+|++ .+.+|+|||++.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~-~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAE-LGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEecCC
Confidence 346999999999999999999999 599999999764
No 129
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.26 E-value=0.00021 Score=65.63 Aligned_cols=34 Identities=32% Similarity=0.529 Sum_probs=30.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.|+|||+|++|+++|..|++ .+.+|+|+|+.+..
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~-~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRK-HGIKVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHh-CCCCEEEEecCCCC
Confidence 68999999999999999999 59999999987643
No 130
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.26 E-value=0.00016 Score=66.99 Aligned_cols=35 Identities=29% Similarity=0.717 Sum_probs=31.3
Q ss_pred cEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
|+||||+|++|+++|..|++. ++.+|+|||+.+..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 899999999999999999983 38999999998654
No 131
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.26 E-value=0.00018 Score=68.96 Aligned_cols=36 Identities=39% Similarity=0.668 Sum_probs=32.5
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
..++|+||||+|++|+.+|.+|++ .+.+|+|||++.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 44 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAAS-YGAKTLLVEAKA 44 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH-TSCCEEEEESSC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 356999999999999999999999 599999999874
No 132
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.26 E-value=0.00015 Score=72.12 Aligned_cols=36 Identities=22% Similarity=0.258 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCC--CeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPK--WKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~--~~vl~lE~G~~ 89 (284)
.++||||||+|++|+++|..|++ .+ .+|+|||++..
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~-~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQ-ANPNAKIALISKVYP 41 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-HCTTCCEEEEESSCG
T ss_pred ccCCEEEECCCHHHHHHHHHHHh-cCCCCcEEEEeCCCC
Confidence 35899999999999999999999 47 99999999754
No 133
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.25 E-value=0.00011 Score=70.71 Aligned_cols=34 Identities=38% Similarity=0.608 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHhc---CCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSE---NPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~---~~~~~vl~lE~G~~ 89 (284)
+||||||+|++|+++|..|++ . +.+|+|||+...
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~-G~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDD-RIDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGG-GSEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCC-CCEEEEEecCCC
Confidence 799999999999999999998 5 899999999753
No 134
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.25 E-value=0.0002 Score=63.62 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=29.7
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEecc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLES 86 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~ 86 (284)
+||++|||+|++|+.+|..|++ .+.+|+|||.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~-~g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSAR-KGIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-TTCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCcEEEEeC
Confidence 4899999999999999999999 5999999986
No 135
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.24 E-value=0.00015 Score=64.62 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=31.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
..+|++|||+|++|+++|..|++ .+.+|+|||+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-ANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-TTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-CCCcEEEEccC
Confidence 45899999999999999999999 58999999964
No 136
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.24 E-value=0.00019 Score=68.96 Aligned_cols=31 Identities=29% Similarity=0.374 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
|+||||+|++|+++|..|++ .+.+|+|||++
T Consensus 1 DVvVIG~G~AGl~aA~~la~-~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRR-AGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHH-CCCCEEEEeCC
Confidence 89999999999999999998 59999999998
No 137
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.24 E-value=0.0002 Score=68.04 Aligned_cols=35 Identities=37% Similarity=0.564 Sum_probs=32.0
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
+||++|||+|++|+.+|.+|++ .+.+|+|||+++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~~~ 35 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQ-LGMKVGVVEKEKA 35 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSS
T ss_pred CCCEEEECCChhHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 3899999999999999999999 4999999999853
No 138
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.24 E-value=0.00022 Score=68.89 Aligned_cols=34 Identities=41% Similarity=0.717 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
+||+||||+|++|+.+|.+|++ .+.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAAR-HNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 4899999999999999999999 599999999985
No 139
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.23 E-value=0.00023 Score=67.81 Aligned_cols=35 Identities=26% Similarity=0.344 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
..+|++|||+|++|+.+|.+|++ .+.+|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVE-QGAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 46899999999999999999999 589999999883
No 140
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.23 E-value=0.0002 Score=71.82 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=32.4
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
...||+||||+|.+|+.+|..|++ .+.+|+|||...
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr-~G~kVlLIEk~~ 54 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVAR-GGLHCLLITSDL 54 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESCG
T ss_pred cCcCCEEEECccHHHHHHHHHHHH-CCCcEEEEEecc
Confidence 346999999999999999999999 599999999874
No 141
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.22 E-value=0.00026 Score=66.24 Aligned_cols=36 Identities=22% Similarity=0.522 Sum_probs=32.7
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
++|++|||+|.+|+++|.+|++ .+.+|+|+|+....
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-KGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-CCCcEEEEEecCCc
Confidence 4799999999999999999999 48999999997654
No 142
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.22 E-value=0.00025 Score=69.23 Aligned_cols=37 Identities=30% Similarity=0.461 Sum_probs=33.7
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
...+|++|||+|++|+.+|.+|.+ .+.+|+|||+++.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~-~G~~v~iiE~~~~ 50 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRE-LGRSVHVIETAGD 50 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHh-CCCCEEEEeCCCC
Confidence 457999999999999999999999 4999999999864
No 143
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.22 E-value=0.00023 Score=67.89 Aligned_cols=35 Identities=34% Similarity=0.548 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
++|++|||+|++|+.+|.+|++ .+.+|+|||+++.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-LGMKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 5899999999999999999999 5999999999853
No 144
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.21 E-value=0.00021 Score=68.55 Aligned_cols=37 Identities=35% Similarity=0.547 Sum_probs=32.9
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
..++|+||||+|++|+.+|.+|++ .+.+|+|||+.+.
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~-~G~~V~liE~~~~ 40 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAAD-EGLKVAIVERYKT 40 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCC
Confidence 346999999999999999999999 5999999999543
No 145
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.20 E-value=0.00016 Score=68.56 Aligned_cols=36 Identities=28% Similarity=0.341 Sum_probs=33.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCC-----CeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPK-----WKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~-----~~vl~lE~G~~ 89 (284)
..+|+||||+|++|+.+|..|++. + .+|+|||+.+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQGD 69 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCCC
Confidence 579999999999999999999984 6 89999999874
No 146
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.20 E-value=0.00024 Score=69.50 Aligned_cols=37 Identities=24% Similarity=0.383 Sum_probs=32.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcC--CCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSEN--PKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~--~~~~vl~lE~G~~ 89 (284)
..+||||||+|++|+++|..|++. .+.+|+|||+...
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 468999999999999999999982 3899999999654
No 147
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.19 E-value=0.00032 Score=66.52 Aligned_cols=37 Identities=32% Similarity=0.376 Sum_probs=32.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCC--eEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKW--KVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G~~~ 90 (284)
..+|++|||+|++|+++|..|++ .+. +|+|+|+....
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-~G~~~~V~v~E~~~~~ 43 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-EKAFDQVTLFERRGSP 43 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-TTCCSEEEEECSSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-cCCCCCeEEEecCCCC
Confidence 45899999999999999999999 488 99999987543
No 148
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.19 E-value=0.00018 Score=63.68 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=31.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEE-eccC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLL-LESG 87 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~-lE~G 87 (284)
..+|++|||+|++|+.+|..|++ .+.+|+| +|+.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~li~e~~ 37 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATR-GGLKNVVMFEKG 37 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH-HTCSCEEEECSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-CCCCeEEEEeCC
Confidence 56999999999999999999999 5899999 9983
No 149
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.18 E-value=0.00026 Score=67.63 Aligned_cols=35 Identities=31% Similarity=0.448 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.++|++|||+|++|+++|.+|++ .+.+|+|||+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~-~G~~V~liE~~~ 38 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQ-LGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCeEEEEecCC
Confidence 36999999999999999999999 489999999954
No 150
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.17 E-value=0.00024 Score=67.80 Aligned_cols=37 Identities=30% Similarity=0.478 Sum_probs=33.3
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
+.++|++|||+|++|+.+|.+|++ .+.+|+|||+.+.
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~~ 40 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQ-LGFKTVCIEKNET 40 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCC
Confidence 346999999999999999999999 4999999999863
No 151
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.17 E-value=0.00022 Score=64.05 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=30.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEecc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLES 86 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~ 86 (284)
..+|++|||+|++|+.+|..|++ .+.+|+|||+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~-~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAAR-AELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCeEEEEec
Confidence 45899999999999999999999 5999999998
No 152
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.16 E-value=0.00025 Score=67.54 Aligned_cols=37 Identities=38% Similarity=0.528 Sum_probs=33.2
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
...+|++|||+|++|+.+|.+|++ .+.+|+|||+.+.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~-~g~~V~liE~~~~ 40 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQ-LGFKTTCIEKRGA 40 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHH-HTCCEEEEECSSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 346999999999999999999999 4899999999853
No 153
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.16 E-value=0.00023 Score=69.06 Aligned_cols=37 Identities=32% Similarity=0.600 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcC-----------CCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSEN-----------PKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~-----------~~~~vl~lE~G~~ 89 (284)
..+||||||+|++|+++|..|++. .+.+|+|||+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 358999999999999999999981 4899999998653
No 154
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.15 E-value=0.00024 Score=64.25 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=31.8
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
...+|++|||+|++|+.+|..|++ .+.+|+|||+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAAR-AQLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHH-TTCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEecC
Confidence 456999999999999999999999 59999999964
No 155
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.14 E-value=0.00029 Score=67.30 Aligned_cols=37 Identities=30% Similarity=0.431 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..+|++|||+|.+|+.+|..|++ .+.+|+|||+....
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~-~g~~v~vlE~~~~~ 68 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAG-AGHQVTVLEASERP 68 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH-HTCEEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEECCCCC
Confidence 45899999999999999999999 59999999997644
No 156
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.13 E-value=0.00029 Score=66.92 Aligned_cols=33 Identities=36% Similarity=0.575 Sum_probs=31.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
+||+||||+|++|+.+|.+|++ .+.+|+|||+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQ-LGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCeEEEEECC
Confidence 5899999999999999999999 49999999987
No 157
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.13 E-value=0.00029 Score=67.09 Aligned_cols=33 Identities=33% Similarity=0.578 Sum_probs=31.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
++|++|||+|++|+.+|.+|++ .+.+|+|||+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-LGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCC
Confidence 5899999999999999999999 49999999987
No 158
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.10 E-value=0.00039 Score=66.98 Aligned_cols=37 Identities=32% Similarity=0.296 Sum_probs=33.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCC-CeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPK-WKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~-~~vl~lE~G~~~ 90 (284)
..+|++|||+|++|+++|.+|++. + .+|+|+|+.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCC
Confidence 468999999999999999999995 6 799999998754
No 159
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.09 E-value=0.00024 Score=68.48 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHhcC-C-CCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSEN-P-KWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~-~-~~~vl~lE~G~ 88 (284)
.+|+||||+|++|+++|.+|++. + +.+|+|||++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999983 2 88999999985
No 160
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.08 E-value=0.00036 Score=70.07 Aligned_cols=36 Identities=31% Similarity=0.480 Sum_probs=32.8
Q ss_pred cccEEEECCChHHHHHHHHHhc-----CCCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSE-----NPKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~-----~~~~~vl~lE~G~~~ 90 (284)
++||+|||+|++|+++|..|++ . +++|+|||+.+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCCCC
Confidence 6899999999999999999998 5 9999999987643
No 161
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.06 E-value=0.00047 Score=69.18 Aligned_cols=40 Identities=28% Similarity=0.448 Sum_probs=36.2
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCccc
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDEN 91 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~~ 91 (284)
++.+|||||||+|..|+++|..|++ .+++||+||+..+..
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~-~g~~vl~id~~~~~g 44 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSR-SGQRVLHVDSRSYYG 44 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHh-CCCEEEEEcCCCccc
Confidence 3557999999999999999999999 599999999998763
No 162
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.06 E-value=0.00034 Score=67.38 Aligned_cols=32 Identities=31% Similarity=0.596 Sum_probs=29.8
Q ss_pred CcccEEEECCChHHHHHHHHHhc-CCCCeEEEec
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSE-NPKWKVLLLE 85 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~-~~~~~vl~lE 85 (284)
.+||++|||+|++|+++|.+|++ . +.+|+|||
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH-KKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc-CCEEEEEe
Confidence 35999999999999999999998 6 89999999
No 163
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.05 E-value=0.00039 Score=66.42 Aligned_cols=34 Identities=44% Similarity=0.708 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
++|+||||+|++|+.+|.+|++ .+.+|+|||++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~-~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ-LGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 6999999999999999999999 589999999875
No 164
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.04 E-value=0.00046 Score=67.71 Aligned_cols=37 Identities=41% Similarity=0.530 Sum_probs=33.4
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
...+|+||||+|++|+.+|.+|.+ .+.+|+|||+++.
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~-~g~~v~iiE~~~~ 43 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQ-AGMKVLGIEAGED 43 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHh-CCCCEEEEeCCCC
Confidence 346999999999999999999999 6999999999864
No 165
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.04 E-value=0.00042 Score=65.95 Aligned_cols=37 Identities=30% Similarity=0.505 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~~ 90 (284)
..+|++|||+|++|+++|.+|++ .+. +|+|+|++...
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~-~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSE-AGITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHH-TTCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHh-cCCCceEEEeCCCCC
Confidence 45899999999999999999999 487 89999998654
No 166
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.02 E-value=0.00044 Score=67.77 Aligned_cols=36 Identities=25% Similarity=0.451 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHHh-cCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLS-ENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~-~~~~~~vl~lE~G~~ 89 (284)
..+|+||||+|++|+.+|.+|. + .+.+|+|||+++.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~-~G~~v~viE~~~~ 43 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHE-LGLTTVGFDKADG 43 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEECCCC
Confidence 4699999999999999999999 7 6999999999753
No 167
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.02 E-value=0.00046 Score=67.77 Aligned_cols=37 Identities=24% Similarity=0.506 Sum_probs=33.0
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
...+|+||||+|++|+.+|.+|.+ .+.+|+|||+++.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~-~G~~v~iiE~~~~ 55 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRS-QGLTVRAFEAASG 55 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHh-CCCCEEEEeCCCC
Confidence 456999999999999999999999 6999999999753
No 168
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.99 E-value=0.0004 Score=66.22 Aligned_cols=35 Identities=34% Similarity=0.502 Sum_probs=31.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
..+|++|||+|++|+.+|.+|++ .+.+|+|+|++.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQ-LGIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-HTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCEEEEEccCC
Confidence 46999999999999999999999 589999999943
No 169
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.97 E-value=0.00056 Score=65.11 Aligned_cols=34 Identities=26% Similarity=0.264 Sum_probs=31.7
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
+|+||||+|.+|+.+|..|++ .+.+|+|+|..+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~-~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLR-LGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-TTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHH-CCCcEEEEeccCC
Confidence 699999999999999999999 5999999998874
No 170
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.95 E-value=0.00047 Score=66.58 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=30.4
Q ss_pred CCcccEEEECCChHHHHHHHHHhc-CCCCeEEEec
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSE-NPKWKVLLLE 85 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~-~~~~~vl~lE 85 (284)
...||+||||+|++|+.+|.+|++ . +.+|+|||
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE 38 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVD 38 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEE
T ss_pred ccccCEEEECCChhHHHHHHHHHHhc-CCeEEEEe
Confidence 346999999999999999999998 6 89999999
No 171
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.91 E-value=0.00061 Score=67.10 Aligned_cols=35 Identities=29% Similarity=0.513 Sum_probs=31.8
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
...||++|||+|++|+.+|.+|++ .+.+|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~-~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAK-YGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHh-CCCeEEEEecc
Confidence 456999999999999999999999 59999999973
No 172
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.91 E-value=0.00062 Score=68.43 Aligned_cols=39 Identities=28% Similarity=0.423 Sum_probs=34.5
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
....+|++|||+|++|+.+|..|++ .+.+|+|+|++...
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~-~G~~V~liE~~~~~ 426 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGV-RGYDVVLAEAGRDL 426 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHH-HTCEEEEECSSSSS
T ss_pred ccccceEEEECCCHHHHHHHHHHHH-CCCeEEEEecCCCC
Confidence 4567899999999999999999999 59999999997643
No 173
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.90 E-value=0.00068 Score=66.70 Aligned_cols=37 Identities=35% Similarity=0.382 Sum_probs=33.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..+|+||||+|++|+.+|..|++ .+.+|+|||+.+..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~-~g~~v~~~e~~~~~ 161 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARD-AGAKVILLEKEPIP 161 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHS-SSCCEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCcEEEEecCCCC
Confidence 36899999999999999999999 58999999998754
No 174
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.84 E-value=0.00081 Score=64.50 Aligned_cols=38 Identities=18% Similarity=0.257 Sum_probs=33.8
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
...+|++|||+|++|+.+|..|++ .+.+|+|+|+....
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~-~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRA-KGYEVHVYDRYDRM 157 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHH-HTCCEEEECSSSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeccCCC
Confidence 356899999999999999999999 58999999998643
No 175
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.81 E-value=0.00069 Score=64.24 Aligned_cols=35 Identities=14% Similarity=0.334 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~ 89 (284)
+|+||||+|++|+.+|.+|++. ++.+|+|||+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5899999999999999999983 3899999999874
No 176
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.78 E-value=0.00077 Score=69.01 Aligned_cols=38 Identities=29% Similarity=0.387 Sum_probs=33.7
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
...+|+||||+|++|+++|..|++ .+.+|+|||++...
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~-~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHN-FGIKVTVLEAKDRI 371 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHH-HTCEEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEecccce
Confidence 346899999999999999999999 59999999997644
No 177
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.76 E-value=0.00095 Score=64.85 Aligned_cols=34 Identities=24% Similarity=0.382 Sum_probs=31.1
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEecc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLES 86 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~ 86 (284)
...+|++|||+|++|+.+|..|++ .+.+|+|+|.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~-~G~~v~lie~ 243 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSAR-KGIRTGLMGE 243 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHh-CCCeEEEEEC
Confidence 346999999999999999999999 5999999986
No 178
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.75 E-value=0.0011 Score=61.34 Aligned_cols=35 Identities=23% Similarity=0.399 Sum_probs=30.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCC--CeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPK--WKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~--~~vl~lE~G~ 88 (284)
..+|+||||+|++|+.+|.+|.+. + .+|+|+|+..
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKL-DGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTT-CSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhh-CCCCCEEEEECCC
Confidence 358999999999999999999984 5 5799999864
No 179
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.75 E-value=0.00074 Score=65.11 Aligned_cols=35 Identities=34% Similarity=0.335 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.+|++|||+|++|+.+|.+|++ . .+|+|||+++..
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~-~-~~V~vie~~~~~ 142 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQ-Y-LTVALIEERGWL 142 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTT-T-CCEEEECTTSSS
T ss_pred cCCEEEECccHHHHHHHHHHHh-c-CCEEEEeCCCCC
Confidence 5799999999999999999999 4 999999998754
No 180
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.73 E-value=0.0012 Score=61.78 Aligned_cols=38 Identities=32% Similarity=0.517 Sum_probs=33.0
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCe--EEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWK--VLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~--vl~lE~G~~~ 90 (284)
...+|++|||+|++|+.+|.+|.+. +.+ |+|||+.+..
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~-g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQN-GFEGRVLVIGREPEI 46 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT-TCCSCEEEEESSSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHcc-CcCCCEEEEecCCCC
Confidence 4569999999999999999999994 655 9999998754
No 181
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.72 E-value=0.0016 Score=65.24 Aligned_cols=38 Identities=16% Similarity=0.334 Sum_probs=33.8
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
...+|++|||+|++|+.+|..|++ .+.+|+|+|+.+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~-~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAA-RGHQVTLFDAHSEI 408 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCCC
Confidence 456899999999999999999999 59999999997643
No 182
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.72 E-value=0.0011 Score=63.36 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHhc---CCCCe---EEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSE---NPKWK---VLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~---~~~~~---vl~lE~G~~ 89 (284)
+|++|||+|++|+++|..|++ . +.+ |+|+|+.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~-G~~~~~V~v~E~~~~ 42 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEK-GAEIPELVCFEKQAD 42 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHT-TCCCCEEEEECSSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhc-CCCCCcEEEEEcCCC
Confidence 699999999999999999998 5 788 999999864
No 183
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.68 E-value=0.0014 Score=65.59 Aligned_cols=38 Identities=32% Similarity=0.398 Sum_probs=34.2
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
...+|++|||+|++|+++|..|++ .+.+|+|+|+....
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~-~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQS-FGMDVTLLEARDRV 142 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHH-CCCeEEEEecCCCC
Confidence 456899999999999999999999 59999999998654
No 184
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.67 E-value=0.0012 Score=63.76 Aligned_cols=40 Identities=25% Similarity=0.454 Sum_probs=34.0
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
....+|+||||+|++|+.+|..|.+. .+.+|+|||+.+..
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 45679999999999999999988762 48899999998653
No 185
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.67 E-value=0.0013 Score=60.80 Aligned_cols=35 Identities=29% Similarity=0.453 Sum_probs=30.9
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..|++|||+|++|+.+|.+|.+. + +|+|+|++...
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~-g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT-Y-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhc-C-CEEEEECCCCC
Confidence 47999999999999999999984 7 99999998753
No 186
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.64 E-value=0.0015 Score=61.72 Aligned_cols=35 Identities=29% Similarity=0.508 Sum_probs=31.3
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCC--eEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKW--KVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G~~ 89 (284)
.+|++|||+|++|+.+|..|.+. +. +|+|||+.+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~-g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRAS-GWEGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHcc-CcCCCEEEEECCCC
Confidence 58999999999999999999984 66 8999998764
No 187
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.62 E-value=0.0011 Score=62.87 Aligned_cols=36 Identities=22% Similarity=0.353 Sum_probs=32.2
Q ss_pred ccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
.|++|||+|++|+.+|.+|++. ++.+|+|||+++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5899999999999999999983 48999999998754
No 188
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.61 E-value=0.0018 Score=65.63 Aligned_cols=38 Identities=29% Similarity=0.411 Sum_probs=33.9
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
...+|++|||+|++|+.+|..|++ .+.+|+|+|+....
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~-~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLME-SGYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCCCc
Confidence 456899999999999999999999 59999999997653
No 189
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.61 E-value=0.0013 Score=62.34 Aligned_cols=37 Identities=38% Similarity=0.611 Sum_probs=32.6
Q ss_pred cccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
.+|++|||+|++|+.+|..|.+. ++.+|+|||+++..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 47999999999999999999983 47899999998753
No 190
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.57 E-value=0.0014 Score=62.83 Aligned_cols=37 Identities=35% Similarity=0.518 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
..|+||||+|++|+.+|.+|++. ++.+|+|||+.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 47999999999999999999983 48899999998753
No 191
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.56 E-value=0.0012 Score=62.97 Aligned_cols=37 Identities=22% Similarity=0.271 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
..|++|||+|++|+.+|.+|.+. ++.+|+|||+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 36999999999999999999983 48999999998764
No 192
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.56 E-value=0.001 Score=63.84 Aligned_cols=36 Identities=11% Similarity=0.350 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHhcC--CCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSEN--PKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~--~~~~vl~lE~G~~ 89 (284)
.+|+||||+|++|+.+|.+|++. ++.+|+|||+...
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 58999999999999999999984 1399999999874
No 193
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.54 E-value=0.0014 Score=61.91 Aligned_cols=36 Identities=19% Similarity=0.351 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
.|++|||+|++|+.+|.+|++. ++.+|+|||+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 3899999999999999999983 48999999998753
No 194
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.52 E-value=0.0015 Score=60.80 Aligned_cols=36 Identities=19% Similarity=0.279 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcC--CCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSEN--PKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~--~~~~vl~lE~G~~~ 90 (284)
.|++|||+|++|+.+|..|++. .+.+|+|||+....
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~ 39 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFS 39 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCc
Confidence 3799999999999999999981 38999999998754
No 195
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.48 E-value=0.0017 Score=63.65 Aligned_cols=39 Identities=31% Similarity=0.507 Sum_probs=34.2
Q ss_pred CCcccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
....|++|||+|++|+.+|.+|.+. ++.+|+|||+++..
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 4568999999999999999999983 47899999999864
No 196
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.48 E-value=0.0021 Score=60.43 Aligned_cols=36 Identities=36% Similarity=0.541 Sum_probs=32.0
Q ss_pred ccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
.|++|||+|++|+.+|..|++. ++.+|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 5899999999999999999982 37899999998754
No 197
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.45 E-value=0.0019 Score=67.45 Aligned_cols=37 Identities=24% Similarity=0.443 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..+|++|||+|++|+.+|..|++ .+.+|+|||+.+..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~-~G~~V~lie~~~~~ 163 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASR-SGARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCCCC
Confidence 35899999999999999999999 59999999998644
No 198
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.35 E-value=0.0028 Score=59.14 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC--eEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW--KVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G~~~ 90 (284)
.|++|||+|++|+.+|..|.+. +. +|+|||+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~-g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA-KYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhh-CcCCCEEEEeCCCCC
Confidence 4899999999999999999994 66 89999998744
No 199
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.34 E-value=0.0033 Score=64.96 Aligned_cols=38 Identities=32% Similarity=0.398 Sum_probs=34.0
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
....|++|||+|++|+.+|..|++ .+.+|+|+|+....
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~-~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQS-FGMDVTLLEARDRV 313 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEEecCcC
Confidence 456899999999999999999999 59999999987654
No 200
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.30 E-value=0.0025 Score=59.67 Aligned_cols=37 Identities=11% Similarity=0.306 Sum_probs=31.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCC--eEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKW--KVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G~~~ 90 (284)
..+|++|||+|++|+.+|.+|.+. +. +|+|||+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQA-GYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHH-TCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-CCCCeEEEEECCCCC
Confidence 458999999999999999999984 55 69999998653
No 201
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.28 E-value=0.0026 Score=60.02 Aligned_cols=37 Identities=27% Similarity=0.426 Sum_probs=32.6
Q ss_pred cccEEEECCChHHHHHHHHHhc--CCCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSE--NPKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~--~~~~~vl~lE~G~~~ 90 (284)
..|++|||+|++|+.+|..|.+ ..+.+|+|||+.+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 4699999999999999999998 248999999998854
No 202
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.09 E-value=0.0035 Score=60.89 Aligned_cols=36 Identities=31% Similarity=0.484 Sum_probs=31.9
Q ss_pred ccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
.|++|||+|++|+.+|.+|.+. ++.+|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 4799999999999999999983 37899999999764
No 203
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.07 E-value=0.004 Score=59.63 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
..+|++|||+|++|+.+|..|.+. ++.+|+|+|+.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 348999999999999999999984 23999999998654
No 204
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.98 E-value=0.0049 Score=64.79 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~ 89 (284)
..+|++|||+|++|+.+|..|++ .+. +|+|+|+...
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~-~G~~~Vtv~E~~~~ 222 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLAR-LGYSDITIFEKQEY 222 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHH-TTCCCEEEEESSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-cCCCcEEEEeCCCC
Confidence 46899999999999999999999 488 7999998753
No 205
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.96 E-value=0.0068 Score=56.55 Aligned_cols=39 Identities=15% Similarity=0.134 Sum_probs=33.3
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++..++|||+|++|+.+|..|.. .+.+|+|+|+.+..
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~-~~~~itlie~~~~~ 44 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALG-KCDDITMINSEKYL 44 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTT-TCSCEEEECSSSSC
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhC-CCCEEEEEECCCCC
Confidence 3567899999999999999999955 78999999998764
No 206
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.95 E-value=0.0049 Score=57.00 Aligned_cols=34 Identities=35% Similarity=0.683 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~ 89 (284)
.+||||+|++|+++|.+|.+. ++.+|+|||....
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 489999999999999999763 4579999998764
No 207
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.91 E-value=0.0036 Score=59.86 Aligned_cols=37 Identities=24% Similarity=0.269 Sum_probs=32.1
Q ss_pred cccEEEECCChHHHHHHHHHhc-C-C----CCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSE-N-P----KWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~-~-~----~~~vl~lE~G~~~ 90 (284)
.+|++|||+|++|+.+|..|.+ . + +.+|+|+|+.+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 4899999999999999999987 4 2 7899999998643
No 208
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.90 E-value=0.0066 Score=56.80 Aligned_cols=35 Identities=29% Similarity=0.466 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCe--EEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWK--VLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~--vl~lE~G~~~ 90 (284)
.|++|||+|++|+.+|..|.+. +.+ |+|+|+.+..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-g~~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-GFEGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-CcCCeEEEEECCCCC
Confidence 4899999999999999999984 655 9999998754
No 209
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.66 E-value=0.0028 Score=61.24 Aligned_cols=39 Identities=21% Similarity=0.218 Sum_probs=30.7
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcC-------------CCCeEEEeccCCc
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSEN-------------PKWKVLLLESGED 89 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~-------------~~~~vl~lE~G~~ 89 (284)
..+.||+||||+|++|+.+|..|.+. ....++.+|+-+.
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~ 87 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQ 87 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSS
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCC
Confidence 34569999999999999999999762 2346778887654
No 210
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.64 E-value=0.0095 Score=57.64 Aligned_cols=38 Identities=16% Similarity=0.312 Sum_probs=33.0
Q ss_pred CCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 51 ILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 51 ~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
..+...+||||+|.+|+.+|.+|.+ .+.+|+|||..+.
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~-~~~~VtLId~~~~ 76 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDT-KKYNVSIISPRSY 76 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCT-TTCEEEEEESSSE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhh-CCCcEEEECCCCC
Confidence 4456789999999999999999988 5899999998764
No 211
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.59 E-value=0.0069 Score=57.38 Aligned_cols=35 Identities=20% Similarity=0.472 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
.+||||+|++|+++|.+|.+. ++.+|+|||+++..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 489999999999999999874 34689999998653
No 212
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.50 E-value=0.0061 Score=61.85 Aligned_cols=35 Identities=29% Similarity=0.534 Sum_probs=31.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCC--------CeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPK--------WKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~--------~~vl~lE~G~ 88 (284)
...+++|||+|++|+++|.+|.+ .+ .+|+|+|+..
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~-~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGR-LAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHH-HHTTSCTTCEEEEEEECCCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-cCcccccCCCceEEEEeccC
Confidence 35799999999999999999998 36 8999999987
No 213
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.21 E-value=0.012 Score=55.32 Aligned_cols=35 Identities=37% Similarity=0.576 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
.++|||+|++|+.+|.+|.+. ++.+|+|||..+..
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~ 39 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC
Confidence 489999999999999999873 56899999987653
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=92.05 E-value=0.13 Score=48.24 Aligned_cols=36 Identities=22% Similarity=0.293 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..+++|||+|..|+.+|..|++ .+.+|.|+|+++..
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 184 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAK-AGKKVTVIDILDRP 184 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHH-CCCeEEEEecCccc
Confidence 4689999999999999999999 59999999998753
No 215
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.99 E-value=0.22 Score=39.11 Aligned_cols=34 Identities=18% Similarity=0.387 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
=.++|+|.|..|..+|..|.+ .+.+|+++|.-+.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~ 41 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRT 41 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHH
T ss_pred CCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHH
Confidence 469999999999999999999 5999999997653
No 216
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=91.57 E-value=0.18 Score=44.46 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=30.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ -+.+|.|+|+++..
T Consensus 147 ~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTK-FADKVTIVHRRDEL 180 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TCSEEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHh-cCCEEEEEeccccc
Confidence 58999999999999999998 58999999998754
No 217
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.34 E-value=0.2 Score=39.12 Aligned_cols=32 Identities=22% Similarity=0.485 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.++|+|+|..|..+|..|.+ .+.+|.++|.-+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~-~g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTA-AGKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHH-TTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCeEEEEECCH
Confidence 58999999999999999999 499999999753
No 218
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.98 E-value=0.23 Score=38.02 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.++|||+|..|..+|..|.+ .+.+|.++|..+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~-~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE-KGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 358999999999999999998 489999998643
No 219
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.68 E-value=0.25 Score=39.42 Aligned_cols=34 Identities=32% Similarity=0.419 Sum_probs=29.6
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.-.++|+|+|..|..+|..|.+ .+.+|.+++.-+
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~-~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASS-SGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 3468999999999999999998 488999998754
No 220
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.58 E-value=0.25 Score=39.27 Aligned_cols=32 Identities=13% Similarity=0.151 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
-.++|+|+|..|..+|..|.+ .+.+|.++|.-
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~-~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQ-RGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHH-CCCCEEEEECC
Confidence 358999999999999999998 58999999975
No 221
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=90.43 E-value=0.2 Score=46.48 Aligned_cols=35 Identities=23% Similarity=0.142 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|++ .+.+|.|+|+++..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~-~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIID-SGTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-HTCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCeEEEEEcCCcc
Confidence 369999999999999999998 58999999998754
No 222
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=90.12 E-value=0.26 Score=46.26 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+.+|..|++ .+.+|.|+|+++..
T Consensus 169 ~vvIiGgG~~g~e~A~~l~~-~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 169 RLIVVGGGVIGLELGVVWHR-LGAEVIVLEYMDRI 202 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHH-cCCEEEEEecCCcc
Confidence 58899999999999999998 58999999998753
No 223
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=90.05 E-value=0.27 Score=46.50 Aligned_cols=34 Identities=24% Similarity=0.313 Sum_probs=30.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+.+|..|++ .+.+|.|+|+++..
T Consensus 171 ~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 204 (464)
T 2eq6_A 171 RLLVIGGGAVGLELGQVYRR-LGAEVTLIEYMPEI 204 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCeEEEEEcCCcc
Confidence 58999999999999999999 58999999998753
No 224
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.83 E-value=0.29 Score=46.01 Aligned_cols=35 Identities=29% Similarity=0.378 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-+++|||+|..|+-+|..|++ .+.+|.|+|+++..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 205 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYAN-FGTKVTILEGAGEI 205 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHH-cCCcEEEEEcCCcc
Confidence 468999999999999999999 58999999998643
No 225
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.73 E-value=0.23 Score=46.83 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=30.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+.+|..|++ .+.+|.|+|+++..
T Consensus 173 ~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 173 HLVVVGGGYIGLELGIAYRK-LGAQVSVVEARERI 206 (458)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HTCEEEEECSSSSS
T ss_pred eEEEECcCHHHHHHHHHHHH-CCCeEEEEEcCCcc
Confidence 58999999999999999998 58999999998754
No 226
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=89.43 E-value=0.33 Score=44.44 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-+++|||+|..|+.+|..|++ .+.+|.++|+++..
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 180 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSS-GGYQLDVVAPCEQV 180 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCeEEEEecCcch
Confidence 468999999999999999999 59999999998754
No 227
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.40 E-value=0.28 Score=44.95 Aligned_cols=35 Identities=34% Similarity=0.487 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAE-AGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHH-TTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHh-CCCEEEEEeCCCee
Confidence 368999999999999999999 58999999998753
No 228
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=89.37 E-value=0.38 Score=42.06 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|++ -+.+|.|+|+....
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~-~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTK-YGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTT-TSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHH-hCCeeeeecccccc
Confidence 468999999999999999998 59999999987654
No 229
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=88.80 E-value=0.38 Score=45.43 Aligned_cols=34 Identities=29% Similarity=0.335 Sum_probs=30.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 185 ~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 218 (478)
T 1v59_A 185 RLTIIGGGIIGLEMGSVYSR-LGSKVTVVEFQPQI 218 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHH-cCCEEEEEEeCCcc
Confidence 58999999999999999999 58999999998754
No 230
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=88.16 E-value=0.44 Score=44.79 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+.+|..|++ .+.+|.|+|+++..
T Consensus 169 ~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 202 (450)
T 1ges_A 169 RVAVVGAGYIGVELGGVING-LGAKTHLFEMFDAP 202 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHh-cCCEEEEEEeCCch
Confidence 58999999999999999999 59999999998653
No 231
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=87.97 E-value=0.47 Score=44.01 Aligned_cols=35 Identities=29% Similarity=0.354 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATART-AGVHVSLVETQPRL 180 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCEEEEEEeCCcc
Confidence 479999999999999999999 58999999998754
No 232
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.76 E-value=0.38 Score=39.21 Aligned_cols=33 Identities=24% Similarity=0.183 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCC-CCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENP-KWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~-~~~vl~lE~G~ 88 (284)
-.++|+|.|..|..+|..|.+ . +.+|.++|.-+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~-~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRA-RYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-HHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHh-ccCCeEEEEECCH
Confidence 469999999999999999998 6 78999998754
No 233
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=87.64 E-value=0.47 Score=42.47 Aligned_cols=34 Identities=26% Similarity=0.371 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~-~g~~V~lv~~~~~~ 201 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAK-NGSDIALYTSTTGL 201 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECC----
T ss_pred EEEEECCCcCHHHHHHHHHh-cCCeEEEEecCCCC
Confidence 68999999999999999999 48899999998653
No 234
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=87.48 E-value=0.49 Score=36.25 Aligned_cols=31 Identities=26% Similarity=0.404 Sum_probs=27.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
.++|+|+|..|..+|..|.+ .+.+|.+++..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~-~g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHR-MGHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHH-TTCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 48999999999999999998 48899999864
No 235
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=87.10 E-value=0.38 Score=45.65 Aligned_cols=35 Identities=34% Similarity=0.427 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-+++|||+|..|+.+|..|++ .+.+|.++|+++..
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 221 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVE-LGKKVRMIERNDHI 221 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHH-TTCEEEEECCGGGT
T ss_pred CeEEEECCCHHHHHHHHHHHh-cCCeEEEEEeCCch
Confidence 468999999999999999999 58999999998643
No 236
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=86.93 E-value=0.57 Score=44.55 Aligned_cols=35 Identities=17% Similarity=0.278 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQR-KGKEVVLIDVVDTC 229 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSST
T ss_pred ceEEEECCCHHHHHHHHHHHH-CCCeEEEEEcccch
Confidence 358999999999999999999 58999999998753
No 237
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.90 E-value=0.45 Score=40.04 Aligned_cols=32 Identities=22% Similarity=0.452 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.++|+|+|..|..+|..|.+ .+..|+++|.-+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~-~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS-RKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH-TTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 37999999999999999998 589999999654
No 238
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=86.62 E-value=0.6 Score=43.66 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCe-EEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWK-VLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~-vl~lE~G~~ 89 (284)
-.++|||+|..|+-+|..|++. +.+ |.++++++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~-~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPV-AKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTT-SCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHH-hCCcEEEEeCCCC
Confidence 4699999999999999999985 777 999998763
No 239
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=86.58 E-value=0.64 Score=40.55 Aligned_cols=34 Identities=32% Similarity=0.354 Sum_probs=30.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++++++..
T Consensus 146 ~v~VvG~G~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 146 RVAVIGGGNSGVEAAIDLAG-IVEHVTLLEFAPEM 179 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHT-TBSEEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHH-hCCEEEEEEeCccc
Confidence 58999999999999999998 58899999988754
No 240
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=86.49 E-value=0.63 Score=34.34 Aligned_cols=32 Identities=19% Similarity=0.489 Sum_probs=27.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCC-CeEEEeccC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPK-WKVLLLESG 87 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~-~~vl~lE~G 87 (284)
-.++|+|+|..|..+|..|.+. + .+|.++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS-SNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-SSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCceEEEEeCC
Confidence 3589999999999999999985 6 889998864
No 241
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=86.29 E-value=0.65 Score=43.77 Aligned_cols=34 Identities=24% Similarity=0.201 Sum_probs=30.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 180 ~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~ 213 (474)
T 1zmd_A 180 KMVVIGAGVIGVELGSVWQR-LGADVTAVEFLGHV 213 (474)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHH-cCCEEEEEeccCcc
Confidence 58999999999999999998 58999999998753
No 242
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=86.15 E-value=0.67 Score=43.55 Aligned_cols=34 Identities=21% Similarity=0.184 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.|+|+++..
T Consensus 173 ~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~ 206 (464)
T 2a8x_A 173 SIIIAGAGAIGMEFGYVLKN-YGVDVTIVEFLPRA 206 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred eEEEECCcHHHHHHHHHHHH-cCCeEEEEEcCCcc
Confidence 58899999999999999999 58999999998753
No 243
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=86.03 E-value=0.78 Score=40.01 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|++ .+.+|.++++++..
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 178 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLAN-ICKKVYLIHRRDGF 178 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHT-TSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHh-cCCEEEEEeeCCcc
Confidence 468999999999999999998 48999999988654
No 244
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=86.01 E-value=0.69 Score=43.68 Aligned_cols=33 Identities=24% Similarity=0.239 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++|||+|..|+.+|..|++ .+.+|.++|+++.
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~-~G~~Vtlv~~~~~ 200 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRS-FGSEVTVVALEDR 200 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHh-cCCEEEEEEcCCc
Confidence 58999999999999999999 5999999999864
No 245
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=85.77 E-value=1 Score=43.66 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=31.6
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.-.++|||+|..|+-+|..|++ .+.+|.|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~-~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAP-EVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT-TCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHh-hCCEEEEEECCCC
Confidence 3469999999999999999998 4899999999986
No 246
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=85.23 E-value=0.81 Score=42.35 Aligned_cols=35 Identities=31% Similarity=0.527 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|.+ .+.+|.++|+.+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARK-LGLSVTILEAGDEL 178 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCeEEEEecCCcc
Confidence 469999999999999999999 58999999998754
No 247
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=85.21 E-value=0.81 Score=42.78 Aligned_cols=35 Identities=31% Similarity=0.424 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|.+ .+.+|.++|+++..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~-~G~~Vtlv~~~~~~ 184 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIK-ANMHVTLLDTAARV 184 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCEEEEEEeCCcc
Confidence 468999999999999999999 58999999998653
No 248
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=85.21 E-value=0.79 Score=40.45 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|++ .+.+|.++++++..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~-~g~~V~~v~~~~~~ 187 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLD-TARRITLIHRRPQF 187 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTT-TSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHh-hCCEEEEEEcCCcc
Confidence 368999999999999999998 48899999998754
No 249
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=85.14 E-value=0.81 Score=42.80 Aligned_cols=34 Identities=32% Similarity=0.470 Sum_probs=31.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 150 ~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAA-QGKNVTMIVRGERV 183 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSST
T ss_pred eEEEECCCHHHHHHHHHHHh-CCCeEEEEEcCCcc
Confidence 79999999999999999999 58999999998754
No 250
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.09 E-value=0.83 Score=43.57 Aligned_cols=34 Identities=15% Similarity=0.202 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 178 ~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~~ 211 (500)
T 1onf_A 178 KIGIVGSGYIAVELINVIKR-LGIDSYIFARGNRI 211 (500)
T ss_dssp EEEEECCSHHHHHHHHHHHT-TTCEEEEECSSSSS
T ss_pred eEEEECChHHHHHHHHHHHH-cCCeEEEEecCCcc
Confidence 58999999999999999998 58999999998753
No 251
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=85.08 E-value=0.89 Score=40.05 Aligned_cols=35 Identities=26% Similarity=0.298 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|++ .+.+|.++++++..
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~-~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTK-YGSKVYIIHRRDAF 194 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTT-TSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHh-cCCeEEEEecCCcC
Confidence 368999999999999999998 48899999988653
No 252
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=85.01 E-value=0.72 Score=44.85 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|++ ...+|.|+++.+..
T Consensus 186 krV~VIG~G~tgve~a~~la~-~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAE-TAKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TBSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHh-hCCEEEEEEcCCCc
Confidence 469999999999999999998 48899999999853
No 253
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=84.99 E-value=0.64 Score=44.04 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.|+|+++..
T Consensus 187 ~vvViGgG~ig~E~A~~l~~-~G~~Vtlv~~~~~~ 220 (482)
T 1ojt_A 187 KLLIIGGGIIGLEMGTVYST-LGSRLDVVEMMDGL 220 (482)
T ss_dssp EEEEESCSHHHHHHHHHHHH-HTCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHH-cCCeEEEEEECCcc
Confidence 58899999999999999998 58999999998753
No 254
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=84.84 E-value=0.56 Score=44.09 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 179 ~vvViGgG~~g~e~A~~l~~-~g~~Vtli~~~~~~ 212 (470)
T 1dxl_A 179 KLVVIGAGYIGLEMGSVWGR-IGSEVTVVEFASEI 212 (470)
T ss_dssp EEEESCCSHHHHHHHHHHHH-HTCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHH-cCCcEEEEEcCCcc
Confidence 58999999999999999998 58999999998753
No 255
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=84.84 E-value=0.83 Score=43.53 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=31.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 176 ~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 176 SVAVFGPGVIGLELGQALSR-LGVIVKVFGRSGSV 209 (492)
T ss_dssp EEEEESSCHHHHHHHHHHHH-TTCEEEEECCTTCC
T ss_pred eEEEECCCHHHHHHHHHHHH-cCCeEEEEEECCcc
Confidence 58999999999999999999 59999999998754
No 256
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=84.83 E-value=0.85 Score=43.19 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++.
T Consensus 187 ~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~ 219 (479)
T 2hqm_A 187 KVVVVGAGYIGIELAGVFHG-LGSETHLVIRGET 219 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHH-TTCEEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHH-cCCceEEEEeCCc
Confidence 58999999999999999999 5899999999875
No 257
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=84.81 E-value=0.72 Score=43.66 Aligned_cols=33 Identities=9% Similarity=0.085 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++|||+|..|+-+|..|++ .+.+|.++++++.
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~-~g~~V~li~~~~~ 231 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYK-YGAKKLISCYRTA 231 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHH-TTCSEEEEECSSC
T ss_pred EEEEEcCCCCHHHHHHHHHH-hCCeEEEEEECCC
Confidence 58999999999999999999 4889999998764
No 258
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=84.58 E-value=0.99 Score=40.07 Aligned_cols=35 Identities=26% Similarity=0.309 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|++ .+.+|.++++++..
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~-~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTR-FARSVTLVHRRDEF 190 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTT-TCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHH-hCCeEEEEEcCCcC
Confidence 468999999999999999998 48999999988643
No 259
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=84.40 E-value=0.98 Score=39.47 Aligned_cols=35 Identities=26% Similarity=0.233 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|++ .+.+|.++++++..
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSN-IASEVHLIHRRDGF 180 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTT-TSSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHh-cCCeEEEEEeCCcc
Confidence 368999999999999999998 48999999988654
No 260
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=84.39 E-value=0.95 Score=42.36 Aligned_cols=34 Identities=29% Similarity=0.454 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|.+ .+.+|.++|+++..
T Consensus 151 ~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~ 184 (452)
T 2cdu_A 151 TITIIGSGYIGAELAEAYSN-QNYNVNLIDGHERV 184 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHT-TTCEEEEEESSSST
T ss_pred eEEEECcCHHHHHHHHHHHh-cCCEEEEEEcCCch
Confidence 58999999999999999998 58999999998753
No 261
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=84.37 E-value=0.94 Score=40.61 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||+|..|+..|..|++ .+..|.++.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~-~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAK-TGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHH-TTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHh-CCCeEEEEeCCh
Confidence 57899999999999999999 589999998865
No 262
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=84.19 E-value=1 Score=39.68 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++++++..
T Consensus 154 ~v~VvG~G~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 187 (325)
T 2q7v_A 154 KVVVIGGGDAAVEEGMFLTK-FADEVTVIHRRDTL 187 (325)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TCSEEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHh-cCCEEEEEeCCCcC
Confidence 58899999999999999998 48999999988643
No 263
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=83.94 E-value=0.78 Score=43.06 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=31.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.|+|++...
T Consensus 149 ~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYE-RGLHPTLIHRSDKI 182 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HTCEEEEEESSSCC
T ss_pred EEEEECCccchhhhHHHHHh-cCCcceeeeeeccc
Confidence 68999999999999999999 59999999998754
No 264
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=83.78 E-value=0.99 Score=42.42 Aligned_cols=33 Identities=21% Similarity=0.216 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++.
T Consensus 178 ~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~ 210 (467)
T 1zk7_A 178 RLAVIGSSVVALELAQAFAR-LGSKVTVLARNTL 210 (467)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCT
T ss_pred EEEEECCCHHHHHHHHHHHH-cCCEEEEEEECCc
Confidence 58999999999999999999 5899999999874
No 265
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=83.68 E-value=0.68 Score=44.19 Aligned_cols=33 Identities=21% Similarity=0.459 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.+||+|+|..|..+|..|++ .+..|+|||.-+.
T Consensus 5 ~iiI~G~G~vG~~la~~L~~-~~~~v~vId~d~~ 37 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVG-ENNDITIVDKDGD 37 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCS-TTEEEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCCEEEEECCHH
Confidence 48999999999999999998 4999999997654
No 266
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=83.48 E-value=1.2 Score=39.07 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|.+ .+.+|.++++++..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~-~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTK-YGSKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTT-TSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHh-cCCEEEEEEcCCcc
Confidence 458999999999999999998 48999999998754
No 267
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=83.38 E-value=1.1 Score=42.15 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 176 ~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~ 209 (468)
T 2qae_A 176 TMVVIGGGVIGLELGSVWAR-LGAEVTVVEFAPRC 209 (468)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHH-hCCEEEEEecCCcc
Confidence 58899999999999999999 58999999998754
No 268
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=83.32 E-value=0.95 Score=40.44 Aligned_cols=32 Identities=22% Similarity=0.251 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||+|..|+..|..|++ .+..|.++.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~-~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQR-SGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHH-TSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHH-CCCeEEEEEcCc
Confidence 58899999999999999999 588999998865
No 269
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=82.93 E-value=1.3 Score=38.40 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=28.5
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 57 FVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 57 ~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
+.|||+|..|..+|..|++ .+.+|.++++...
T Consensus 3 i~iiG~G~~G~~~a~~l~~-~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCK-QGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEECCSHHHHHHHHHHHH-TTCEEEEECSSCC
T ss_pred EEEECcCHHHHHHHHHHHh-CCCCEEEEEcCcc
Confidence 7899999999999999999 5889999987654
No 270
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=82.87 E-value=1.1 Score=40.93 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.|.|||+|..|.-.|..++. .+..|.++|.-+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~-~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFAS-GGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 358899999999999999999 599999999654
No 271
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=82.75 E-value=1.2 Score=39.19 Aligned_cols=34 Identities=32% Similarity=0.386 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++++++..
T Consensus 157 ~v~viG~G~~g~e~a~~l~~-~g~~V~~i~~~~~~ 190 (319)
T 3cty_A 157 RVVTIGGGNSGAIAAISMSE-YVKNVTIIEYMPKY 190 (319)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TBSEEEEECSSSSC
T ss_pred eEEEECCCHHHHHHHHHHHh-hCCcEEEEEcCCcc
Confidence 58899999999999999998 48899999987643
No 272
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=82.61 E-value=1.2 Score=39.99 Aligned_cols=34 Identities=26% Similarity=0.300 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|.+ .+.+|.++++++..
T Consensus 165 ~vvVvG~G~~g~e~A~~l~~-~g~~V~lv~~~~~~ 198 (360)
T 3ab1_A 165 RVVIVGGGDSALDWTVGLIK-NAASVTLVHRGHEF 198 (360)
T ss_dssp EEEEECSSHHHHHHHHHTTT-TSSEEEEECSSSSC
T ss_pred cEEEECCCHHHHHHHHHHHh-cCCEEEEEEcCCCC
Confidence 58999999999999999998 48899999998754
No 273
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=82.51 E-value=1.1 Score=42.26 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.+||||.|..|..+|..|.+ .+..|++||.-+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~-~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLS-SGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-TTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHH-CCCCEEEEECCHH
Confidence 359999999999999999999 5999999997764
No 274
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=82.38 E-value=1.2 Score=42.80 Aligned_cols=34 Identities=26% Similarity=0.359 Sum_probs=31.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 153 ~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHH-LGIKTTLLELADQV 186 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSS
T ss_pred EEEEECCCHHHHHHHHHHHh-cCCcEEEEEcCCcc
Confidence 69999999999999999999 48999999998754
No 275
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=82.08 E-value=1.3 Score=40.70 Aligned_cols=35 Identities=23% Similarity=0.216 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|.+ .+.+|.++|+.+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~-~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARA-KGLEVDVVELAPRV 177 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCEEEEEeCCCcc
Confidence 358999999999999999998 58999999998754
No 276
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=82.02 E-value=0.84 Score=42.58 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=32.0
Q ss_pred cccEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
.-.++|||+|..|+-+|..|++. ++.+|.++++++..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 45799999999999999999984 37899999998754
No 277
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=82.01 E-value=1.3 Score=40.80 Aligned_cols=35 Identities=34% Similarity=0.316 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|.+ .+.+|.++|+++..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~-~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTK-FGVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHh-cCCeEEEEecCCch
Confidence 468999999999999999999 58999999998754
No 278
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=81.77 E-value=1.1 Score=42.58 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 200 ~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 200 SMIVVGGGVIGLELGSVWAR-LGAKVTVVEFLDTI 233 (491)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HTCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHH-cCCEEEEEeccccc
Confidence 47999999999999999998 58999999998754
No 279
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=81.69 E-value=0.71 Score=44.38 Aligned_cols=36 Identities=25% Similarity=0.383 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHhcC-------------CCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSEN-------------PKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~-------------~~~~vl~lE~G~~~ 90 (284)
..++|||+|++|+-+|..|++. ...+|.|+|+++..
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i 266 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV 266 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc
Confidence 3589999999999999988751 24689999999864
No 280
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=81.49 E-value=1.4 Score=41.49 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=30.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 174 ~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 174 DMVIIGAGYIGLEIASIFRL-MGVQTHIIEMLDRA 207 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHH-cCCEEEEEEeCCcC
Confidence 58999999999999999999 58999999998753
No 281
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=81.06 E-value=1.5 Score=42.62 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.-.++|||+|..|+-+|..|++ .+.+|.|+++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~-~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAE-QAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHh-hCCEEEEEECCCC
Confidence 3469999999999999999998 4889999999985
No 282
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=80.93 E-value=1.5 Score=41.27 Aligned_cols=33 Identities=27% Similarity=0.218 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++.
T Consensus 189 ~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 189 RSVIVGAGYIAVEMAGILSA-LGSKTSLMIRHDK 221 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-cCCeEEEEEeCCc
Confidence 58999999999999999999 5899999999865
No 283
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=80.91 E-value=1.3 Score=43.04 Aligned_cols=31 Identities=16% Similarity=0.108 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
.++|||+|..|+-+|..|++ .+.+|.++|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLAS-LGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHH-cCCEEEEEECC
Confidence 58999999999999999999 48899999987
No 284
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=80.80 E-value=1.4 Score=39.75 Aligned_cols=31 Identities=26% Similarity=0.431 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
.+.|||+|..|+..|..|++ .+..|.++++.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~-~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLAL-AGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHH-TTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHH-CCCEEEEEECh
Confidence 58899999999999999999 58899999875
No 285
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=80.56 E-value=1.5 Score=38.79 Aligned_cols=32 Identities=28% Similarity=0.510 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||+|..|..+|..|++ .+.+|.+++..+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~-~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAA-TGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 48899999999999999998 589999998754
No 286
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=80.51 E-value=1.8 Score=36.28 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.+.|||.|..|..+|..|++ .+.+|.++++.+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~-~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEI-AGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCEEEEEcCCH
Confidence 468899999999999999998 588999998764
No 287
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=79.96 E-value=1.6 Score=38.12 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||+|..|..+|..|++ .+.+|.++++.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQ-GGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHh-CCCcEEEEECCH
Confidence 48899999999999999999 588999998753
No 288
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=79.85 E-value=1.7 Score=38.28 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.+.|||+|..|..+|..|++ .+.+|.+.+.-+.
T Consensus 6 kV~VIGaG~mG~~iA~~la~-~G~~V~l~d~~~~ 38 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAF-HGFAVTAYDINTD 38 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSHH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCHH
Confidence 47899999999999999999 5999999987653
No 289
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=79.70 E-value=1.7 Score=40.80 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 182 ~v~ViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 182 KLGVIGAGVIGLELGSVWAR-LGAEVTVLEAMDKF 215 (476)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSS
T ss_pred eEEEECCCHHHHHHHHHHHH-cCCcEEEEecCCCc
Confidence 58999999999999999999 58999999998753
No 290
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=79.63 E-value=1.4 Score=42.00 Aligned_cols=34 Identities=21% Similarity=0.117 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHhcCC---CCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENP---KWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~---~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ . +.+|.++|+++..
T Consensus 193 ~vvViGgG~ig~E~A~~l~~-~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 193 RVLTVGGGFISVEFAGIFNA-YKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp EEEEECSSHHHHHHHHHHHH-HCCTTCEEEEEESSSSS
T ss_pred eEEEECCCHHHHHHHHHHHh-hCCCCCeEEEEEcCCcc
Confidence 58899999999999999998 4 8899999998753
No 291
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=79.59 E-value=1.4 Score=41.93 Aligned_cols=33 Identities=21% Similarity=0.147 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHhcCC---CCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENP---KWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~---~~~vl~lE~G~~ 89 (284)
.++|||+|..|+-+|..|.+ - +.+|.++|+++.
T Consensus 189 ~vvViGgG~ig~E~A~~l~~-~~~~g~~Vtlv~~~~~ 224 (490)
T 1fec_A 189 RALCVGGGYISIEFAGIFNA-YKARGGQVDLAYRGDM 224 (490)
T ss_dssp EEEEECSSHHHHHHHHHHHH-HSCTTCEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHh-hccCcCeEEEEEcCCC
Confidence 68899999999999999998 4 889999999875
No 292
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=79.48 E-value=1.8 Score=40.51 Aligned_cols=34 Identities=29% Similarity=0.272 Sum_probs=30.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 149 ~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~ 182 (452)
T 3oc4_A 149 TVAVIGAGPIGMEAIDFLVK-MKKTVHVFESLENL 182 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSS
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEEEccCcc
Confidence 58999999999999999999 58999999998753
No 293
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=79.38 E-value=1.2 Score=39.45 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||+|..|+..|..|++ .+.+|.++.+..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~-~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQ-SLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHH-HCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCeEEEEEecc
Confidence 58899999999999999998 478899988774
No 294
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=79.12 E-value=1.9 Score=40.83 Aligned_cols=35 Identities=23% Similarity=0.172 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHhc-------------------CCCC-eEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSE-------------------NPKW-KVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~-------------------~~~~-~vl~lE~G~~ 89 (284)
-.++|||+|..|+-+|..|++ ..+. +|.|+++++.
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 469999999999999999994 2355 7999998874
No 295
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=78.81 E-value=1.8 Score=38.38 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC--eEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW--KVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G~ 88 (284)
-.+.|||+|..|..+|..|++ .+. .|.+++...
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~-~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQ-RGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCCh
Confidence 358999999999999999998 477 899998764
No 296
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=78.74 E-value=1.9 Score=41.85 Aligned_cols=34 Identities=29% Similarity=0.418 Sum_probs=30.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+++..
T Consensus 189 ~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~ 222 (588)
T 3ics_A 189 HATVIGGGFIGVEMVENLRE-RGIEVTLVEMANQV 222 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHh-CCCeEEEEecCCcc
Confidence 58999999999999999999 58999999998753
No 297
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=78.72 E-value=1.3 Score=39.40 Aligned_cols=33 Identities=24% Similarity=0.379 Sum_probs=29.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
.--++|||+|..|...|..|.+ .+.+|.|++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~-~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMP-TGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGG-GTCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHh-CCCEEEEEcCC
Confidence 3469999999999999999999 59999999854
No 298
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=78.48 E-value=1.9 Score=37.17 Aligned_cols=34 Identities=9% Similarity=0.189 Sum_probs=29.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
..--++|||+|..|...|..|.+ .+.+|.|++.-
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~-~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQ-EGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGG-GCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-CCCEEEEECCC
Confidence 34579999999999999999999 58999999753
No 299
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=78.42 E-value=2 Score=40.81 Aligned_cols=34 Identities=21% Similarity=0.411 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|.+ .+.+|.++|+++..
T Consensus 184 ~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~~ 217 (499)
T 1xdi_A 184 HLIVVGSGVTGAEFVDAYTE-LGVPVTVVASQDHV 217 (499)
T ss_dssp SEEEESCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHH-cCCeEEEEEcCCcc
Confidence 58899999999999999998 58999999998753
No 300
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=78.26 E-value=2.6 Score=40.34 Aligned_cols=43 Identities=23% Similarity=0.284 Sum_probs=33.3
Q ss_pred cCCCCCCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 46 LGNKPILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 46 ~~~~~~~~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
|.+.+...---+.|||+|..|...|..|++ .+..|+++|.-+.
T Consensus 46 ~~~~~~~~i~kVaVIGaG~MG~~IA~~la~-aG~~V~l~D~~~e 88 (460)
T 3k6j_A 46 HTNSEAYDVNSVAIIGGGTMGKAMAICFGL-AGIETFLVVRNEQ 88 (460)
T ss_dssp TTSCCCCCCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHH
T ss_pred cccCCcccCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEECcHH
Confidence 433333333458899999999999999999 5999999987654
No 301
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=78.25 E-value=1.9 Score=36.83 Aligned_cols=33 Identities=12% Similarity=-0.019 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.++|||+|..|+.+|..|++. + +|.+++.+..
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~-g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDW-G-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGT-S-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhc-C-cEEEEECCCC
Confidence 4689999999999999999995 6 9999998865
No 302
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=78.15 E-value=2 Score=41.18 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|.+ .+.+|.++|+++..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~-~G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNA-TGRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHH-cCCeEEEEEecCcc
Confidence 468999999999999999998 58999999998753
No 303
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=77.96 E-value=1.8 Score=37.53 Aligned_cols=35 Identities=29% Similarity=0.243 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|.+ .+.+|.++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~-~g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSS-YSTKVYLIHRRDTF 189 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHH-hCCeEEEEEeCCCC
Confidence 468999999999999999998 48999999998754
No 304
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=77.79 E-value=1.5 Score=42.08 Aligned_cols=34 Identities=32% Similarity=0.354 Sum_probs=30.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|++ .+.+|.++|.++..
T Consensus 357 ~V~ViGgG~~g~E~A~~L~~-~g~~Vtlv~~~~~l 390 (521)
T 1hyu_A 357 RVAVIGGGNSGVEAAIDLAG-IVEHVTLLEFAPEM 390 (521)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HBSEEEEECSSSSC
T ss_pred eEEEECCCHHHHHHHHHHHh-hCCEEEEEEeCccc
Confidence 68999999999999999998 48899999988654
No 305
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=77.78 E-value=11 Score=36.36 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=31.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.+-.+||+|.|..|..+|..|.+ .+..|+++|.-+.
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~-~~~~vvvid~~~~ 161 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLES-RNHLFVVVTDNYD 161 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTT-TTCCEEEEESCHH
T ss_pred cCCeEEEECCChHHHHHHHHHHH-CCCCEEEEECCHH
Confidence 34579999999999999999998 5899999997654
No 306
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=77.53 E-value=2 Score=38.46 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=28.0
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.-.+.|||+|..|+..|..|++ .+..|.++ +.+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~-~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLAR-AGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHH-TTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHH-CCCeEEEE-EcH
Confidence 3468999999999999999999 58899998 544
No 307
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=77.44 E-value=2.3 Score=37.01 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|.+ .+.+|.++++++..
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~-~~~~v~~~~~~~~~ 189 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEP-IAKEVSIIHRRDKF 189 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTT-TBSEEEEECSSSSC
T ss_pred CEEEEECCCHhHHHHHHHHHh-hCCeEEEEEecCcC
Confidence 368999999999999999998 48899999988754
No 308
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=77.20 E-value=2.4 Score=36.62 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|.+ .+.+|.++++++..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~-~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLAN-ICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHT-TSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHh-hCCEEEEEEeCCCC
Confidence 468999999999999999998 48999999988754
No 309
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=77.07 E-value=2.2 Score=40.33 Aligned_cols=32 Identities=9% Similarity=0.056 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.++|||+|..|+-+|..|++ .+.+|.++|++.
T Consensus 187 ~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTG-IGLDTTVMMRSI 218 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHH-cCCceEEEEcCc
Confidence 58999999999999999999 489999999864
No 310
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=76.85 E-value=2.6 Score=36.98 Aligned_cols=32 Identities=25% Similarity=0.413 Sum_probs=28.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.++|||+|..|+-+|..|++. + +|.+++++.
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~-~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTV-A-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhh-C-CEEEEECCC
Confidence 4689999999999999999984 5 699998874
No 311
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=76.62 E-value=1.9 Score=37.46 Aligned_cols=35 Identities=20% Similarity=0.246 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~ 89 (284)
...++|||+|..|+.+|..|++ .+. +|.|++....
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~-~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLAS-AGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHH-cCCCeEEEEcCCCc
Confidence 4679999999999999999999 476 8999997753
No 312
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=76.50 E-value=2 Score=40.41 Aligned_cols=35 Identities=26% Similarity=0.331 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCC-CCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENP-KWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~-~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|++ . +.+|.++|+++..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~-~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLAD-MWGIDTTVVELADQI 195 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-HHCCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHH-hcCCcEEEEEccCcc
Confidence 368999999999999999998 6 8899999998753
No 313
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=76.41 E-value=1.5 Score=37.19 Aligned_cols=33 Identities=18% Similarity=0.097 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.++|+|.|..|..+|..|.+. +. |+++|.-+.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~~ 42 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS-EV-FVLAEDENV 42 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS-EE-EEEESCGGG
T ss_pred CEEEEECCChHHHHHHHHHHhC-Ce-EEEEECCHH
Confidence 4689999999999999999984 77 999987643
No 314
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=76.18 E-value=2.4 Score=37.96 Aligned_cols=32 Identities=25% Similarity=0.373 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||+|..|..+|..|++ .+.+|.++++.+
T Consensus 6 ki~iiG~G~~G~~~a~~L~~-~g~~V~~~~r~~ 37 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLAL-KGQSVLAWDIDA 37 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHh-CCCEEEEEeCCH
Confidence 58999999999999999998 588999998753
No 315
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=75.68 E-value=2.7 Score=37.47 Aligned_cols=32 Identities=31% Similarity=0.385 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.+.|||+|..|+..|..|+ . +..|.++.+...
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~~ 35 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQE 35 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHh-c-CCceEEEECCHH
Confidence 5789999999999999999 4 889999988753
No 316
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=75.44 E-value=2.6 Score=39.78 Aligned_cols=34 Identities=35% Similarity=0.408 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+.+|..|.+ .+.+|.++|+++..
T Consensus 193 ~v~ViGgG~~g~e~A~~l~~-~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 193 SIVIVGGGYIGVEFANIFHG-LGVKTTLLHRGDLI 226 (484)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred cEEEECcCHHHHHHHHHHHH-cCCeEEEEECCCcc
Confidence 68999999999999999998 58999999998753
No 317
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=74.88 E-value=2.2 Score=37.91 Aligned_cols=29 Identities=24% Similarity=0.349 Sum_probs=26.8
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEecc
Q psy4112 57 FVIIGGGVGGSVVANRLSENPKWKVLLLES 86 (284)
Q Consensus 57 ~iivg~G~~g~~~a~~l~~~~~~~vl~lE~ 86 (284)
+.|||+|..|..+|..|++ .+.+|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~-~g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVD-NGNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHH-HCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHh-CCCeEEEEEc
Confidence 6899999999999999998 5889999987
No 318
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=74.77 E-value=2.6 Score=40.40 Aligned_cols=31 Identities=13% Similarity=0.119 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
.++|||+|..|+-+|..|++ .+.+|.++|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~-~G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAG-IGLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHH-cCCeEEEEecc
Confidence 48999999999999999999 48999999985
No 319
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=74.65 E-value=2.8 Score=37.62 Aligned_cols=34 Identities=32% Similarity=0.487 Sum_probs=29.7
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
+..+.|||+|..|+..|.+|++ .+.+|.++++.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~-~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHE-NGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHh-CCCeEEEEeCCH
Confidence 3568999999999999999999 589999998753
No 320
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=74.42 E-value=2.8 Score=37.96 Aligned_cols=32 Identities=25% Similarity=0.401 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-+.|||+|..|...|..|++ .+.+|.+.+.-+
T Consensus 8 kI~vIGaG~MG~~iA~~la~-~G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFAS-GGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 47899999999999999999 599999998754
No 321
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=74.27 E-value=3 Score=40.26 Aligned_cols=35 Identities=26% Similarity=0.276 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.+||||.|..|..+|..|.+ .+..|++||.-+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~-~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDR-KPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHH-CCCCEEEEECChHH
Confidence 469999999999999999999 59999999987654
No 322
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=73.95 E-value=3 Score=39.04 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..|+-+|..|.+ .+.+|.++|+++..
T Consensus 172 ~v~ViGgG~~g~e~A~~l~~-~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 172 SILIAGGGYIAVEFANIFHG-LGVKTTLIYRGKEI 205 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHH-cCCeEEEEEcCCcc
Confidence 58999999999999999999 58999999998753
No 323
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=73.86 E-value=1.8 Score=33.74 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=28.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.+.|||+|..|..+|..|.+ .+.+|.+.++-.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~-~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSY-PQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCT-TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCEEEEEcCCH
Confidence 458899999999999999998 578888888654
No 324
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=73.83 E-value=3.4 Score=34.09 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=27.3
Q ss_pred EEEEC-CChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 57 FVIIG-GGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 57 ~iivg-~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
+.||| +|..|..+|..|++ .+.+|.++++..
T Consensus 3 i~iiGa~G~~G~~ia~~l~~-~g~~V~~~~r~~ 34 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLAT-LGHEIVVGSRRE 34 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHT-TTCEEEEEESSH
T ss_pred EEEEcCCCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 68999 99999999999998 588999988653
No 325
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=73.73 E-value=2.8 Score=40.06 Aligned_cols=34 Identities=26% Similarity=0.419 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
...+.|||.|..|+.+|..|++ .+.+|.+++.-+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~-~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLAD-IGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHh-CCCEEEEEECCH
Confidence 4678899999999999999999 589999998754
No 326
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=73.37 E-value=2.7 Score=38.71 Aligned_cols=30 Identities=20% Similarity=0.360 Sum_probs=26.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEec
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLE 85 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE 85 (284)
.+.|||+|..|+.+|..|++..+.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 478999999999999999873388999998
No 327
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=72.86 E-value=3.2 Score=39.45 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||+|..|..+|..|++ .+..|+++|.-+
T Consensus 39 kV~VIGaG~MG~~iA~~la~-~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFAR-VGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHT-TTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 58899999999999999998 599999998754
No 328
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=72.63 E-value=3.6 Score=38.88 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..+.+. +. +|.++++....
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~-Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQ-GATSVKCLYRRDRK 300 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSCST
T ss_pred CEEEEECCChhHHHHHHHHHHc-CCCEEEEEEeCCcc
Confidence 4699999999999999998884 55 69999988643
No 329
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=72.61 E-value=3.3 Score=38.97 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.++|||+|..|+-+|..|++ .+.+|.++++..
T Consensus 189 ~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 189 KTLVVGAGYIGLECAGFLKG-LGYEPTVMVRSI 220 (483)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHH-cCCEEEEEeCCC
Confidence 58999999999999999999 489999999853
No 330
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=72.03 E-value=3.9 Score=38.54 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHhcC-------------------CC-CeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSEN-------------------PK-WKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~-------------------~~-~~vl~lE~G~~ 89 (284)
-.++|||+|..|+-+|..|++. .+ .+|.|+++++.
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 4689999999999999999972 13 58999998764
No 331
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=71.42 E-value=3.9 Score=34.34 Aligned_cols=33 Identities=24% Similarity=0.264 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.+.|||+|..|..+|..|.+ .+.+|.++++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~-~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVG-SGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-TTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 468999999999999999998 488999988654
No 332
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=71.01 E-value=2.5 Score=37.08 Aligned_cols=30 Identities=17% Similarity=0.171 Sum_probs=27.0
Q ss_pred cEEEECCChHHHHHHHHHhcCC-----C-CeEEEecc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENP-----K-WKVLLLES 86 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~-----~-~~vl~lE~ 86 (284)
.+.|||+|..|...|..|++ . + .+|.++++
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~-~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLAL-RAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHh-CccccCCCCCEEEEEc
Confidence 58999999999999999998 5 6 78999876
No 333
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=70.92 E-value=3.8 Score=37.56 Aligned_cols=33 Identities=27% Similarity=0.280 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.+.|||+|.-|..+|..|++ .+..|.+.++.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~-~G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLAR-KGQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHT-TTCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHH-CCCeEEEEeCCH
Confidence 469999999999999999999 588999998764
No 334
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=70.91 E-value=3.5 Score=36.89 Aligned_cols=33 Identities=24% Similarity=0.410 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~ 88 (284)
-.+.|||+|..|..+|..|++ .+. +|.+++...
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~-~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGK-DNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCceEEEEeCCc
Confidence 358899999999999999998 476 899999765
No 335
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=70.91 E-value=3.3 Score=38.88 Aligned_cols=31 Identities=29% Similarity=0.341 Sum_probs=27.9
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 57 FVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 57 ~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
+.|||.|..|+.+|..|++ .+.+|.+++..+
T Consensus 3 I~VIG~G~vG~~~A~~la~-~G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSA-RGHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHH-TTCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHH-CCCEEEEEECCH
Confidence 6899999999999999999 589999998754
No 336
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=70.77 E-value=2.8 Score=37.97 Aligned_cols=32 Identities=28% Similarity=0.335 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||+|..|...|..|++ .+..|.++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~-~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSK-KCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHh-CCCEEEEEECCH
Confidence 58999999999999999998 588999988654
No 337
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=70.55 E-value=3.1 Score=40.44 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.++|||+|..|+-.|.-+++ -+.+|.|+++..
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~-lG~~VTii~~~~ 256 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNS-LGYDVTVAVRSI 256 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHH-HTCCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHh-cCCeEEEecccc
Confidence 58999999999999999999 599999998754
No 338
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=70.49 E-value=4.2 Score=34.81 Aligned_cols=35 Identities=17% Similarity=0.293 Sum_probs=30.0
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.-.+.|||.|..|..+|..|++ .+.+|.+.++.+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~-~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALAD-LGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHH-CCCEEEEEeCChh
Confidence 3568899999999999999999 5899999987654
No 339
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=70.49 E-value=4 Score=36.38 Aligned_cols=31 Identities=26% Similarity=0.337 Sum_probs=27.3
Q ss_pred EEEECCChHHHHHHHHHhcCCCC--eEEEeccCC
Q psy4112 57 FVIIGGGVGGSVVANRLSENPKW--KVLLLESGE 88 (284)
Q Consensus 57 ~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G~ 88 (284)
+.|||+|..|..+|..|+. .+. .|.++|...
T Consensus 3 I~VIGaG~vG~~la~~la~-~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVL-RGSCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHH-TTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCCH
Confidence 7899999999999999998 477 899998754
No 340
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=70.19 E-value=3.8 Score=38.80 Aligned_cols=32 Identities=25% Similarity=0.331 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||.|..|+.+|..|++ .+.+|.+++.-+
T Consensus 4 kI~VIG~G~vG~~lA~~La~-~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAE-LGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHh-cCCEEEEEECCH
Confidence 47899999999999999999 589999998765
No 341
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=70.12 E-value=4.5 Score=35.74 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=29.0
Q ss_pred cEEEEC-CChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIG-GGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg-~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.+.||| .|..|..+|..|++ .+.+|.++++...
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~-~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRA-SGYPISILDREDW 56 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHT-TTCCEEEECTTCG
T ss_pred EEEEEcCCCHHHHHHHHHHHh-CCCeEEEEECCcc
Confidence 589999 99999999999998 5889999986653
No 342
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=69.21 E-value=4.7 Score=35.18 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.+.|||.|..|..+|..|++ .+.+|.+.++.+.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~-~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVK-AGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHH-CCCeEEEEcCCHH
Confidence 47899999999999999999 5899999987654
No 343
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=68.78 E-value=4.6 Score=35.62 Aligned_cols=33 Identities=15% Similarity=0.081 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.+.|||.|..|..+|..|++ .+.+|.+.++-+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~-~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLR-AGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHH-CCCeEEEEECCH
Confidence 358899999999999999999 589999998654
No 344
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=68.60 E-value=3.6 Score=37.27 Aligned_cols=34 Identities=18% Similarity=0.279 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~ 89 (284)
-.+.|||+|..|..+|..|++. +. +|.++|.-..
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVKG 44 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECChh
Confidence 4699999999999999999984 66 8999987653
No 345
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=68.54 E-value=4.8 Score=34.73 Aligned_cols=31 Identities=16% Similarity=0.249 Sum_probs=27.3
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 57 FVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 57 ~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
+.|||.|..|..+|..|.+ .+.+|.++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~-~g~~V~~~~~~~ 33 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRR-RGHYLIGVSRQQ 33 (279)
T ss_dssp EEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred EEEEcCcHHHHHHHHHHHH-CCCEEEEEECCH
Confidence 6899999999999999998 488999987654
No 346
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=68.50 E-value=4.6 Score=36.49 Aligned_cols=34 Identities=29% Similarity=0.381 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~ 89 (284)
-.+.|||+|..|..+|..|++. +. +|.++|.-..
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCHH
Confidence 3689999999999999999984 76 8999997643
No 347
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=68.41 E-value=4.7 Score=35.77 Aligned_cols=34 Identities=18% Similarity=0.271 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.+.|||.|..|..+|..|++ .+.+|.+.++-+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~-~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLK-NGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHH-CCCeEEEEeCCHH
Confidence 468999999999999999999 5899999987654
No 348
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=68.32 E-value=5.2 Score=37.94 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=32.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
..+.+.|||.|.-|+.+|..|++ .+.+|++++.-+..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~-~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSD-FGHEVVCVDKDARK 43 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCSTT
T ss_pred CceEEEEEcCCHHHHHHHHHHHH-CCCEEEEEeCCHHH
Confidence 45788999999999999999999 59999999987653
No 349
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=68.18 E-value=4.8 Score=35.53 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.+.|||.|..|..+|..|++ .+.+|.++++.+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-MGHTVTVWNRTAE 64 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSGG
T ss_pred CeEEEEcccHHHHHHHHHHHh-CCCEEEEEeCCHH
Confidence 469999999999999999998 5889999987643
No 350
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=68.08 E-value=3.7 Score=41.23 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=29.5
Q ss_pred cEEEEC--CChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIG--GGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg--~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.++||| +|..|+-+|..|++ .+.+|.|+|+++
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~-~G~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLAT-AGHEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHH-TTCEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHH-cCCEEEEEeccc
Confidence 689998 99999999999999 488999999987
No 351
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=67.34 E-value=5.9 Score=34.00 Aligned_cols=33 Identities=27% Similarity=0.305 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-++|.|+|..|..++.+|.+ .+.+|.++.+...
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~-~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTA-QGHEVTGLRRSAQ 37 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEEECTTS
T ss_pred cEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 48999999999999999999 4899999987643
No 352
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=67.23 E-value=4.1 Score=38.64 Aligned_cols=34 Identities=32% Similarity=0.364 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHhcC---CCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSEN---PKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~---~~~~vl~lE~G~ 88 (284)
-.++|||+|..|+-+|..|++. .+.+|.++++.+
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~ 217 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 217 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc
Confidence 3589999999999999999862 257899999775
No 353
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=66.88 E-value=4.7 Score=35.33 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||.|..|..+|..|++ .+.+|.+.++.+
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~-~G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLK-AGYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHH-TTCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHh-CCCeEEEEcCCH
Confidence 47899999999999999999 589999998764
No 354
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=66.71 E-value=5.3 Score=35.18 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.+.|||.|..|..+|..|++ .+.+|.+.++-+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~-~G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTE-WPGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTT-STTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHH-CCCeEEEEeCCHH
Confidence 468999999999999999999 5899999987664
No 355
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=66.50 E-value=4.2 Score=36.45 Aligned_cols=31 Identities=26% Similarity=0.335 Sum_probs=27.3
Q ss_pred EEEECCChHHHHHHHHHhcCCCC--eEEEeccCC
Q psy4112 57 FVIIGGGVGGSVVANRLSENPKW--KVLLLESGE 88 (284)
Q Consensus 57 ~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G~ 88 (284)
+.|||+|..|..+|..|++ .+. .|.+++...
T Consensus 3 I~VIGaG~~G~~la~~l~~-~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLM-KGFAREMVLIDVDK 35 (319)
T ss_dssp EEEECCSHHHHHHHHHHHH-HTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHh-CCCCCeEEEEeCCh
Confidence 6899999999999999998 477 899998754
No 356
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=66.31 E-value=6.6 Score=35.03 Aligned_cols=34 Identities=32% Similarity=0.478 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~ 89 (284)
.+.|||+|..|..+|..|++. .+..|.++|....
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 378999999999999999984 2678999998653
No 357
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=66.24 E-value=5.9 Score=33.89 Aligned_cols=33 Identities=18% Similarity=0.444 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-++|+|+|..|..++.+|.+ .+.+|.++.+...
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~-~g~~V~~~~r~~~ 39 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAP-QGWRIIGTSRNPD 39 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGG-GTCEEEEEESCGG
T ss_pred cEEEECCcHHHHHHHHHHHH-CCCEEEEEEcChh
Confidence 48999999999999999999 4899999987653
No 358
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=66.15 E-value=5.6 Score=34.38 Aligned_cols=32 Identities=22% Similarity=0.383 Sum_probs=27.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCC--eEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKW--KVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G~ 88 (284)
.+.|||.|..|..+|..|.+ .+. +|.+.+..+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~-~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRR-SGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHH-TTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHh-cCCCcEEEEEeCCH
Confidence 37899999999999999998 466 899987654
No 359
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=66.08 E-value=4.6 Score=34.47 Aligned_cols=31 Identities=23% Similarity=0.490 Sum_probs=27.2
Q ss_pred EEEECCChHHHHHHHHHhcCCC-CeEEEeccCC
Q psy4112 57 FVIIGGGVGGSVVANRLSENPK-WKVLLLESGE 88 (284)
Q Consensus 57 ~iivg~G~~g~~~a~~l~~~~~-~~vl~lE~G~ 88 (284)
+.|||.|..|...|..|++ .+ ..|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~-~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVK-QGGYRIYIANRGA 34 (263)
T ss_dssp EEEECCSHHHHHHHHHHHH-HCSCEEEEECSSH
T ss_pred EEEECchHHHHHHHHHHHH-CCCCeEEEECCCH
Confidence 6799999999999999998 47 8999988654
No 360
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=65.56 E-value=5.6 Score=35.85 Aligned_cols=33 Identities=24% Similarity=0.475 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~ 88 (284)
..+.|||+|..|..+|..|+.. +. +|.++|.-.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-NLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCH
Confidence 3589999999999999999984 66 899998754
No 361
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=65.34 E-value=3.8 Score=37.36 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCC-------CeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPK-------WKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~-------~~vl~lE~G~~ 89 (284)
.+.|||+|..|...|..|++ .+ ..|.++++.+.
T Consensus 23 kI~iIGaG~mG~alA~~L~~-~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGT-NAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHH-HHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHH-cCCccCCCCCeEEEEECChh
Confidence 58999999999999999998 46 88999987654
No 362
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=65.26 E-value=3.8 Score=34.48 Aligned_cols=34 Identities=26% Similarity=0.498 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEE-eccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLL-LESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~-lE~G~~ 89 (284)
-.+.|||+|..|..+|..|++ .+.+|.+ .++.+.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~-~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTA-AQIPAIIANSRGPA 58 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHH-TTCCEEEECTTCGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCEEEEEECCCHH
Confidence 468999999999999999999 4888888 776543
No 363
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=65.09 E-value=5.4 Score=38.21 Aligned_cols=32 Identities=25% Similarity=0.392 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||+|..|...|..|++ .+..|.+.|.-.
T Consensus 7 kVgVIGaG~MG~~IA~~la~-aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAAS-HGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHH-CCCeEEEEECCH
Confidence 47899999999999999999 599999998654
No 364
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=65.05 E-value=5.4 Score=35.62 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.+.|||.|..|..+|..|++ .+.+|.+.++.+.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~-~G~~V~~~dr~~~ 65 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCE-AGYALQVWNRTPA 65 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHH-TTCEEEEECSCHH
T ss_pred CEEEEECccHHHHHHHHHHHh-CCCeEEEEcCCHH
Confidence 368999999999999999999 5899999987643
No 365
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=65.05 E-value=5.4 Score=37.89 Aligned_cols=34 Identities=32% Similarity=0.566 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|+|+|..|..+|..|.+ +.+|-+||.-...
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~d~~r 269 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQ--TYSVKLIERNLQR 269 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHHH
T ss_pred cEEEEEcchHHHHHHHHHhhh--cCceEEEecCHHH
Confidence 369999999999999999864 6899999987653
No 366
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=64.95 E-value=5.5 Score=38.17 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~ 89 (284)
-.+.|||.|..|+.+|..|++.++. +|.+++..+.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 3588999999999999999993388 9999998876
No 367
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=64.87 E-value=6 Score=34.48 Aligned_cols=32 Identities=16% Similarity=0.387 Sum_probs=28.3
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGG-GVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||. |..|..+|..|.+ .+.+|.++++.+
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~-~g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHD-SAHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-SSSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHh-CCCEEEEEECCH
Confidence 5889999 9999999999998 588999988654
No 368
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=64.85 E-value=6.2 Score=35.23 Aligned_cols=33 Identities=27% Similarity=0.475 Sum_probs=28.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
+--+.|||.|..|...|..|+ . +..|.+.+.-+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 346789999999999999999 5 99999998754
No 369
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=64.57 E-value=5.6 Score=34.62 Aligned_cols=32 Identities=16% Similarity=0.331 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||.|..|..+|..|.+ .+.+|.++++.+
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLK-AGYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHH-TTCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHh-CCCEEEEEeCCH
Confidence 58899999999999999998 488999998754
No 370
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=64.55 E-value=6.4 Score=35.20 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCC-CeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPK-WKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~-~~vl~lE~G~ 88 (284)
.+.|||.|..|..+|..|++ .+ .+|.+.++.+
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~-~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGG-RNAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHT-TTCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHH-cCCCeEEEEeCCC
Confidence 48899999999999999999 58 8999998765
No 371
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=64.53 E-value=6.1 Score=35.38 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC--eEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW--KVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G~ 88 (284)
-.+.|||.|..|..+|..|.+ .+. +|.+.++.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~-~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRR-SGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHH-TTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHh-CCCCCEEEEEECCH
Confidence 358899999999999999999 477 899988654
No 372
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=64.39 E-value=6 Score=34.37 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.+.|||.|..|..+|..|++ .+.+|.+.++.+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~-~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMK-HGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHH-TTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHH-CCCEEEEEeCCHH
Confidence 37899999999999999998 5889999987543
No 373
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=64.15 E-value=3.7 Score=36.87 Aligned_cols=33 Identities=27% Similarity=0.332 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCC-------CeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPK-------WKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~-------~~vl~lE~G~~ 89 (284)
.+.|||+|..|...|..|++ .+ ..|.++++.+.
T Consensus 10 kI~iIG~G~mG~~~a~~l~~-~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGG-NAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HHHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHh-cCCcccCCCCeEEEEEcChh
Confidence 58999999999999999998 46 78999987654
No 374
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=64.08 E-value=5.8 Score=41.49 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCC-eEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKW-KVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~ 88 (284)
.++|||+|..|+-+|..+.+. +. +|.|+++++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~-G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRC-GARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHc-CCCEEEEEEecC
Confidence 799999999999999999984 64 899999886
No 375
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=64.04 E-value=7.7 Score=31.51 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=27.7
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 57 FVIIGG-GVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 57 ~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
++|+|+ |..|..++.+|.+ .+.+|.++.+.+.
T Consensus 3 vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~ 35 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKN-RGHEVTAIVRNAG 35 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTCEEEEEESCSH
T ss_pred EEEEcCCchhHHHHHHHHHh-CCCEEEEEEcCch
Confidence 789994 9999999999999 4899999987653
No 376
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=63.95 E-value=6.7 Score=34.17 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=28.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.++|+|+|-.|..+|..|++. +.+|.+..+-.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL-DCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 3589999999999999999994 78999986543
No 377
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=63.87 E-value=4.6 Score=35.22 Aligned_cols=33 Identities=18% Similarity=0.339 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.+.|||.|..|..+|..|++ .+.+|.+.++-+.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~-~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVR-AGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHH-HTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHH-CCCeEEEEcCCHH
Confidence 47899999999999999999 5899999987654
No 378
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=63.80 E-value=7.1 Score=35.80 Aligned_cols=37 Identities=19% Similarity=0.338 Sum_probs=30.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~~ 90 (284)
....++|||+|-.|+.+|..|+.. ++ ++.|++.....
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~a-GVg~ItlvD~D~Ve 70 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTVS 70 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCBCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEecCCEec
Confidence 347799999999999999999995 54 78888877643
No 379
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=63.53 E-value=5.2 Score=35.54 Aligned_cols=32 Identities=28% Similarity=0.353 Sum_probs=27.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCC--CeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPK--WKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~--~~vl~lE~G~ 88 (284)
.+.|||+|..|..+|..|++. + ..|.+++...
T Consensus 3 kI~VIGaG~~G~~la~~L~~~-g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQ-GVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEcCCH
Confidence 478999999999999999984 6 5899998754
No 380
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=63.42 E-value=4 Score=42.39 Aligned_cols=33 Identities=6% Similarity=0.071 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++|||+|..|+-+|..|++ .+.+|.|+|+++.
T Consensus 286 ~vvViGgG~~g~E~A~~L~~-~G~~Vtvv~~~~~ 318 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAA-TGGVVAVIDARSS 318 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGG-GTCCSEEEESCSS
T ss_pred eEEEEcCCHHHHHHHHHHHH-cCCcEEEEECCCc
Confidence 58999999999999999998 4888999998865
No 381
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=63.26 E-value=6.4 Score=33.64 Aligned_cols=29 Identities=24% Similarity=0.173 Sum_probs=25.9
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEecc
Q psy4112 57 FVIIGGGVGGSVVANRLSENPKWKVLLLES 86 (284)
Q Consensus 57 ~iivg~G~~g~~~a~~l~~~~~~~vl~lE~ 86 (284)
+.|||.|..|..+|..|++ .+.+|.+.+.
T Consensus 3 I~iIG~G~mG~~la~~l~~-~g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRS-RGVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHH-TTCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHH-CCCeEEEeCC
Confidence 6799999999999999998 5889999765
No 382
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=62.86 E-value=6.5 Score=36.46 Aligned_cols=30 Identities=20% Similarity=0.215 Sum_probs=26.8
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 57 FVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 57 ~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
+.|||.|..|+.+|..|++ +.+|.+++..+
T Consensus 3 I~VIG~G~vG~~~A~~La~--G~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSL--QNEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTT--TSEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhC--CCEEEEEECCH
Confidence 6899999999999999997 68999998754
No 383
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=62.32 E-value=8.2 Score=30.88 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=28.1
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGG-GVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-++|+|+ |..|..++.+|.+. +.+|.++.+.+.
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~~ 38 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSS 38 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGG
T ss_pred EEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeChh
Confidence 3789997 99999999999994 899999987543
No 384
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=62.26 E-value=6.7 Score=34.16 Aligned_cols=33 Identities=24% Similarity=0.186 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.+.|||.|..|...|..|.+ .+.+|.++++.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-EGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-TTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHH-CCCeEEEEeCCH
Confidence 358899999999999999998 488999988654
No 385
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=62.23 E-value=7.9 Score=31.65 Aligned_cols=31 Identities=19% Similarity=0.370 Sum_probs=27.3
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 57 FVIIGG-GVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 57 ~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
++|.|+ |..|..++.+|.+ .+.+|.++.+..
T Consensus 3 ilVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARR-RGHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHH-CCCEEEEEEecc
Confidence 789997 9999999999999 489999997654
No 386
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=62.03 E-value=5.3 Score=38.35 Aligned_cols=35 Identities=14% Similarity=0.276 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
-.++|||+|..|+-+|..|++. +.+|.++++.+..
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~-~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQ-AAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhc-CceEEEEEcCCcc
Confidence 4588999999999999999984 8899999987643
No 387
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=61.84 E-value=6.8 Score=36.81 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.+.|||.|.+|.++|..|.+ .+.+|.+.|...
T Consensus 10 k~v~viG~G~sG~s~A~~l~~-~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAK-LGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHH-TTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHh-CCCEEEEEeCCc
Confidence 358999999999999998988 599999999865
No 388
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=61.75 E-value=8.1 Score=36.27 Aligned_cols=36 Identities=14% Similarity=0.126 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.-.++|||+|..|..+|..+.. -+.+|.+++.-+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~-lGa~V~v~D~~~~~ 225 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARR-LGAVVSATDVRPAA 225 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSTTH
T ss_pred CCEEEEECCcHHHHHHHHHHHH-CCCEEEEEcCCHHH
Confidence 3579999999999999999888 58899999877643
No 389
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=61.38 E-value=7.1 Score=37.11 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=30.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
....+.|||.|-.|+.+|..|++ .+.+|+.+|.-+
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~-~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFAL-LGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-HTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHh-CCCcEEEEECCH
Confidence 45679999999999999999998 599999998654
No 390
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=61.27 E-value=7.5 Score=35.52 Aligned_cols=33 Identities=27% Similarity=0.341 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
--++|+|+|..|..+|..+.. .+.+|++++..+
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~-~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALG-MGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCEEEEEECCH
Confidence 458999999999999999998 488999998754
No 391
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=61.21 E-value=7.6 Score=34.38 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.+.|||.|..|..+|..|.+ .+.+|.+.++.+
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~-~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLK-QGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 468999999999999999999 589999998654
No 392
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=61.18 E-value=7.3 Score=33.56 Aligned_cols=32 Identities=22% Similarity=0.352 Sum_probs=27.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.+.|||.|..|...|..|++ +.+|.++++.+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~--g~~V~~~~~~~~ 34 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR--RFPTLVWNRTFE 34 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT--TSCEEEECSSTH
T ss_pred eEEEEcccHHHHHHHHHHhC--CCeEEEEeCCHH
Confidence 37899999999999999997 788999987653
No 393
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=60.71 E-value=8 Score=34.84 Aligned_cols=32 Identities=25% Similarity=0.414 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESG 87 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G 87 (284)
-.+.|||+|..|..+|..|+. .+. .|.++|.-
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~-~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQ-KELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCCeEEEEecc
Confidence 358999999999999999998 477 89999876
No 394
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=60.70 E-value=7.9 Score=34.55 Aligned_cols=32 Identities=34% Similarity=0.530 Sum_probs=27.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCC-eEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKW-KVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~ 88 (284)
.+.|||+|..|..+|..|+.. +. +|.++|.-.
T Consensus 4 kI~VIGaG~vG~~~a~~la~~-g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAK-ELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 478999999999999999984 54 799998754
No 395
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=60.61 E-value=6.8 Score=37.10 Aligned_cols=32 Identities=25% Similarity=0.231 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
--++|||+|..|...|..|.+ .+.+|.|++..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~-~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLE-AGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHh-CcCEEEEEcCC
Confidence 358999999999999999999 59999999864
No 396
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=60.37 E-value=6.4 Score=35.01 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESG 87 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G 87 (284)
-.+.|||.|..|..+|..|++ .+. +|.+.++-
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~-~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQ-AGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHH-CCCCeEEEEcCC
Confidence 458899999999999999999 488 99999885
No 397
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=60.37 E-value=6.8 Score=33.95 Aligned_cols=31 Identities=23% Similarity=0.233 Sum_probs=27.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||.|..|...|..|++ .+.+|.+++ .+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~-~~ 35 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLAR-AGHQLHVTT-IG 35 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHH-TTCEEEECC-SS
T ss_pred EEEEEccCHHHHHHHHHHHh-CCCEEEEEc-CH
Confidence 47899999999999999998 588999987 44
No 398
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=60.32 E-value=4.8 Score=36.02 Aligned_cols=33 Identities=18% Similarity=0.097 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.++|+|.|..|..+|..|.+. +. |+++|.-+.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~-g~-v~vid~~~~ 148 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS-EV-FVLAEDENV 148 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS-CE-EEEESCGGG
T ss_pred CCEEEECCcHHHHHHHHHHHhC-Cc-EEEEeCChh
Confidence 3599999999999999999984 77 999987653
No 399
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=60.22 E-value=8.2 Score=33.36 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=29.4
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~ 89 (284)
...++|||.|-.|+.+|..|+.. +. ++.|++....
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCCCc
Confidence 46799999999999999999994 65 7888887653
No 400
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=60.21 E-value=6.8 Score=33.37 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCC----CeEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPK----WKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~----~~vl~lE~G~~ 89 (284)
.+.|||.|..|..+|..|.+ .+ ..|.+.++.+.
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~-~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIAN-ANIIKKENLFYYGPSKK 42 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHH-HTSSCGGGEEEECSSCC
T ss_pred EEEEECcCHHHHHHHHHHHH-CCCCCCCeEEEEeCCcc
Confidence 58899999999999999998 36 68999887643
No 401
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=60.03 E-value=6.6 Score=36.72 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.+.|||.|.+|.++|..|.+ .+.+|.+.|.....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~-~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLA-RGVTPRVMDTRMTP 40 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHT-TTCCCEEEESSSSC
T ss_pred EEEEEeecHHHHHHHHHHHh-CCCEEEEEECCCCc
Confidence 47899999999999988877 59999999987543
No 402
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=60.00 E-value=8.5 Score=33.95 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.+.|||.|..|..+|.+|.. -+.+|++.++-.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~-~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAA-LGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHH-CCCEEEEEECCH
Confidence 458999999999999999998 488999998654
No 403
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=59.89 E-value=9.4 Score=31.72 Aligned_cols=33 Identities=12% Similarity=0.279 Sum_probs=28.5
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGG-GVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-++|.|+ |..|..+|.+|.+ .+.+|.++.+...
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~-~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKN-KGHEPVAMVRNEE 56 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSGG
T ss_pred eEEEECCCChHHHHHHHHHHh-CCCeEEEEECChH
Confidence 4889997 9999999999999 5899999987643
No 404
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=59.85 E-value=8.6 Score=33.83 Aligned_cols=33 Identities=21% Similarity=0.202 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.+.|||.|..|..+|.+|.. -+.+|++.++-.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~-~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAA-LGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHh-CCCEEEEEECCH
Confidence 468999999999999999998 488999998654
No 405
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=59.57 E-value=8.1 Score=37.19 Aligned_cols=33 Identities=24% Similarity=0.189 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
--++|+|+|..|..+|.+|+. .+.+|++.|.-+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa-~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQ-AGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCEEEEEcCCH
Confidence 458899999999999999999 489999998654
No 406
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=59.31 E-value=8.4 Score=36.74 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=29.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.-++.|||.|..|..+|..|++ .+.+|.+.++-+
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~-~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIES-RGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHT-TTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHh-CCCeEEEEeCCH
Confidence 3579999999999999999998 589999987654
No 407
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=59.21 E-value=8.7 Score=35.19 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=30.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
..-.+.|||.|..|..+|..|++ .+.+|.+.++-+
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~-~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRK-GGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHh-CCCEEEEEeCCH
Confidence 34578999999999999999999 589999998754
No 408
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=59.15 E-value=7.8 Score=39.03 Aligned_cols=32 Identities=41% Similarity=0.589 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||+|..|..+|..|++ .+..|+++|.-+
T Consensus 314 kV~VIGaG~MG~~iA~~la~-aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALIL-SNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHT-TTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHh-CCCEEEEEECCH
Confidence 48899999999999999998 599999998654
No 409
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=59.10 E-value=8.5 Score=35.51 Aligned_cols=32 Identities=13% Similarity=0.198 Sum_probs=28.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
--++|+|.|..|..+|.+|.+ .+.+|++.+.-
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~-~GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNT-EGAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHH-CCCEEEEEcCC
Confidence 458999999999999999999 58999998753
No 410
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=59.07 E-value=8.2 Score=36.72 Aligned_cols=32 Identities=28% Similarity=0.406 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||.|..|..+|..|++ .+.+|.+.++.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~-~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAE-KGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHH-TTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 58899999999999999999 588999998643
No 411
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=59.02 E-value=8.8 Score=35.70 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.++|||+|..|..+|..+.. -+.+|++++..+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~-~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANS-LGAIVRAFDTRPE 206 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCEEEEEcCCHH
Confidence 468999999999999998887 4789999987654
No 412
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=58.89 E-value=7.2 Score=36.56 Aligned_cols=36 Identities=28% Similarity=0.411 Sum_probs=30.8
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGE 88 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~ 88 (284)
..+..++|+|+|.+|..+|.-|... +. +|.++|.-+
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~-Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAA-GATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 4457899999999999999998884 76 999999865
No 413
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=58.66 E-value=8.7 Score=35.00 Aligned_cols=32 Identities=19% Similarity=0.268 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||.|..|..+|..|.+ .+.+|.+.+.-+
T Consensus 10 kIgIIG~G~mG~slA~~L~~-~G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHA-ANHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 47899999999999999999 589999998654
No 414
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=58.41 E-value=9.7 Score=33.76 Aligned_cols=33 Identities=15% Similarity=0.192 Sum_probs=27.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~ 88 (284)
-.++|+|+|.+|..+|..|.+. +. +|.|..+-.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~-G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLST-AAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 3599999999999999999984 76 899987653
No 415
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=58.36 E-value=6.5 Score=37.81 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=28.6
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCC---eEEEeccC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKW---KVLLLESG 87 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~---~vl~lE~G 87 (284)
.-.++|||+|..|.++|..|+++.+. .|++++.-
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~ 49 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAE 49 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccc
Confidence 34699999999999999999987655 68998754
No 416
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=58.33 E-value=7.5 Score=36.34 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=30.6
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCC
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGE 88 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~ 88 (284)
..+..++|+|+|.+|..+|..|... +. +|.++++-+
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~-G~~~I~v~Dr~G 226 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDL-GVKNVVAVDRKG 226 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCC
Confidence 3457899999999999999999884 65 899999863
No 417
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=58.19 E-value=9.2 Score=29.21 Aligned_cols=27 Identities=26% Similarity=0.433 Sum_probs=22.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeE
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKV 81 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~v 81 (284)
-.++|||+|..|..++..|.++++.+|
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~~g~~v 31 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQGKEFHP 31 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCcEE
Confidence 468999999999999999987545443
No 418
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=57.95 E-value=9.2 Score=35.12 Aligned_cols=33 Identities=27% Similarity=0.290 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.++|||+|..|..+|..+.. -+.+|++++..+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~-~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANG-MGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCEEEEEeCCH
Confidence 468999999999999999988 488999998654
No 419
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=57.77 E-value=11 Score=30.88 Aligned_cols=32 Identities=19% Similarity=0.326 Sum_probs=27.9
Q ss_pred EEEEC-CChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 57 FVIIG-GGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 57 ~iivg-~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
++|.| +|..|..++.+|.+ .+.+|.++.+...
T Consensus 3 ilItGatG~iG~~l~~~L~~-~g~~V~~~~R~~~ 35 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLST-TDYQIYAGARKVE 35 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTT-SSCEEEEEESSGG
T ss_pred EEEECCCCHHHHHHHHHHHH-CCCEEEEEECCcc
Confidence 68888 79999999999999 4899999987654
No 420
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=57.55 E-value=11 Score=33.89 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=27.9
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 57 FVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 57 ~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
++|+|+|..|..+|..+.+ .+.+|++++.-++
T Consensus 4 I~ilGgg~~g~~~~~~Ak~-~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKK-AGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEECCSHHHHHHHHHHHH-TTCEEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHH-CCCEEEEEeCCCC
Confidence 7899999999999888777 6999999987654
No 421
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=57.17 E-value=11 Score=34.56 Aligned_cols=35 Identities=14% Similarity=0.129 Sum_probs=29.5
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.-.++|+|+|..|..+|..+.. -+.+|.+.+.-+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~-~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKR-LGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCHH
Confidence 3568999999999999998887 4788999987654
No 422
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=57.16 E-value=9.1 Score=34.13 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCC----CeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPK----WKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~----~~vl~lE~G~~ 89 (284)
-.+.|||.|..|..+|..|.+ .+ ..|.+.++...
T Consensus 23 mkI~iIG~G~mG~ala~~L~~-~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTA-AGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHH-TTSSCGGGEEEECSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCCCcceEEEECCCcc
Confidence 358999999999999999998 46 68999987653
No 423
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=57.16 E-value=7.9 Score=33.12 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=27.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCe-EEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWK-VLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~-vl~lE~G~ 88 (284)
-.+.|||.|..|...|..|++. +.+ |.+.++.+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK-GFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCCH
Confidence 3589999999999999999984 777 88887654
No 424
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=57.10 E-value=9.8 Score=33.32 Aligned_cols=30 Identities=23% Similarity=0.462 Sum_probs=26.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
.++|+|+|-.|..+|..|++. + +|.+..+-
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~-G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKD-N-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSS-S-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-C-CEEEEECC
Confidence 589999999999999999994 7 99998654
No 425
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=57.08 E-value=10 Score=32.27 Aligned_cols=33 Identities=12% Similarity=0.197 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCC----eEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKW----KVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~----~vl~lE~G~~ 89 (284)
.+.|||.|..|...|..|.+ .+. +|.+.++.+.
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~-~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMIN-KNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTSSCGGGEEEECSCHH
T ss_pred eEEEECccHHHHHHHHHHHh-CCCCCCCeEEEEeCCHH
Confidence 47899999999999999998 476 8999887643
No 426
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=57.08 E-value=11 Score=32.40 Aligned_cols=33 Identities=27% Similarity=0.346 Sum_probs=28.9
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGG-GVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-++|.|+ |..|..++.+|.+. +.+|.++.+...
T Consensus 9 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 42 (321)
T 3vps_A 9 RILITGGAGFIGGHLARALVAS-GEEVTVLDDLRV 42 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCCEEEECCCSS
T ss_pred eEEEECCCChHHHHHHHHHHHC-CCEEEEEecCCc
Confidence 4889998 99999999999994 899999987654
No 427
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=56.93 E-value=8.1 Score=38.30 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=30.4
Q ss_pred cEEEEC--CChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIG--GGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg--~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++||| +|..|+.+|..|++ .+.+|.+++.++..
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~-~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQ-KGYEVSIVTPGAQV 560 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHH-TTCEEEEEESSSST
T ss_pred EEEEEcCCCCccHHHHHHHHHh-CCCeeEEEeccccc
Confidence 499999 99999999999999 48999999988754
No 428
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=56.92 E-value=10 Score=36.04 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-++.|||.|..|..+|..|++ .+.+|.+.++-+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~-~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND-HGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-TTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHH-CCCeEEEEeCCH
Confidence 368899999999999999999 588999998754
No 429
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=56.88 E-value=11 Score=35.86 Aligned_cols=35 Identities=14% Similarity=0.362 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHhcC-CCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~~~ 90 (284)
.|+|||+|.+|+-+|..|++. ++.+|.++=+.+..
T Consensus 248 rV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 248 NIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 499999999999999999863 46788888777643
No 430
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=56.83 E-value=9.8 Score=34.31 Aligned_cols=32 Identities=25% Similarity=0.225 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||.|..|...|..|.+ .+.+|.+.+.-.
T Consensus 18 ~I~IIG~G~mG~alA~~L~~-~G~~V~~~~~~~ 49 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKD-SGVDVTVGLRSG 49 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEECCTT
T ss_pred EEEEECchHHHHHHHHHHHH-CcCEEEEEECCh
Confidence 48899999999999999998 588998887654
No 431
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=56.81 E-value=8.2 Score=32.85 Aligned_cols=32 Identities=22% Similarity=0.199 Sum_probs=27.0
Q ss_pred cEEEECC-Ch-HHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGG-GV-GGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~-G~-~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-++|.|+ |. .|..+|.+|++ .+.+|+++.+..
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~-~G~~V~~~~r~~ 57 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALL-EGADVVISDYHE 57 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHH-TTCEEEEEESCH
T ss_pred EEEEECCCCCchHHHHHHHHHH-CCCEEEEecCCH
Confidence 4889998 75 99999999999 499999987654
No 432
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=56.74 E-value=8.3 Score=33.63 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=28.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.+.|||+|..|..+|..|.+. +.+|.+.++-.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~-g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE-GAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 3589999999999999999984 67999987654
No 433
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=56.65 E-value=11 Score=37.28 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=29.9
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~ 89 (284)
...++|||+|..|+.+|..|+.. ++ ++.|+|....
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a-GVG~ItLvD~D~V 362 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTV 362 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCCEEEEECCSBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCcc
Confidence 46799999999999999999995 65 7889987654
No 434
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=56.52 E-value=10 Score=34.54 Aligned_cols=33 Identities=27% Similarity=0.318 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.++|+|+|.+|..+|..+... +.+|.++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4689999999999999999884 77999998754
No 435
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=56.44 E-value=11 Score=31.98 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=27.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||.|..|...|..|.+ .+..|.+.++.+
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~-~g~~v~~~~~~~ 36 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQ-TPHELIISGSSL 36 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTT-SSCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEECCCH
Confidence 58899999999999999998 478899987654
No 436
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=55.92 E-value=7 Score=37.22 Aligned_cols=33 Identities=18% Similarity=0.384 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcC-CCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSEN-PKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~-~~~~vl~lE~G~ 88 (284)
.+.|||.|..|+.+|..|++. .+.+|.+++.-+
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 589999999999999999984 268999998643
No 437
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=55.72 E-value=7.1 Score=36.92 Aligned_cols=33 Identities=18% Similarity=0.313 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHhcCC-CCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENP-KWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~-~~~vl~lE~G~ 88 (284)
.+.|||.|..|+.+|..|++.. +.+|.+++.-+
T Consensus 7 kI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 7 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5889999999999999999831 68999998654
No 438
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=55.63 E-value=11 Score=34.10 Aligned_cols=34 Identities=24% Similarity=0.403 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~ 89 (284)
-.+.|||+|..|..+|..|+. .+. .|.++|.-..
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~-~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGL-KELGDVVLFDIAEG 42 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCCeEEEEeCCch
Confidence 468999999999999999998 466 8999987653
No 439
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=55.54 E-value=11 Score=37.32 Aligned_cols=38 Identities=18% Similarity=0.318 Sum_probs=30.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
....++|||+|..|+.+|..|+...-.++.|+|.....
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 34679999999999999999999533478888877643
No 440
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=55.50 E-value=8.7 Score=35.77 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.++|||+|..|..+|..+.. -+.+|++++.-+.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~-lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKR-LGAKTTGYDVRPE 218 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-HTCEEEEECSSGG
T ss_pred CEEEEECchHHHHHHHHHHHH-CCCEEEEEeCCHH
Confidence 579999999999999999887 4889999987754
No 441
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=55.47 E-value=11 Score=32.37 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||.|..|..+|..|.+. +.+|.+.++-.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-GLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 799999999999999999984 67899987653
No 442
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=55.36 E-value=12 Score=30.62 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=27.4
Q ss_pred EEEEC-CChHHHHHHHHHh-cCCCCeEEEeccCCc
Q psy4112 57 FVIIG-GGVGGSVVANRLS-ENPKWKVLLLESGED 89 (284)
Q Consensus 57 ~iivg-~G~~g~~~a~~l~-~~~~~~vl~lE~G~~ 89 (284)
++|.| +|-.|..+|.+|+ + .+.+|.++.+.+.
T Consensus 8 vlVtGasg~iG~~~~~~l~~~-~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTY-TDMHITLYGRQLK 41 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHH-CCCEEEEEESSHH
T ss_pred EEEEeCCcHHHHHHHHHHHhc-CCceEEEEecCcc
Confidence 88999 5999999999999 6 5899999977543
No 443
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=55.34 E-value=10 Score=35.78 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.+.|||.|..|+.+|..|++ +.+|++++..+.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ--NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc--CCeEEEEecCHH
Confidence 358899999999999999996 899999987653
No 444
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=55.20 E-value=14 Score=31.98 Aligned_cols=34 Identities=9% Similarity=0.122 Sum_probs=24.0
Q ss_pred cEEEECCChHH-HHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 56 DFVIIGGGVGG-SVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 56 d~iivg~G~~g-~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.++|||+|..+ ..+|..+.+ .+.+|++++.+...
T Consensus 148 ~~~VIggG~~~~~e~a~~~~~-~~~~v~i~~~~~~~ 182 (304)
T 4fk1_A 148 PLIIISENEDHTLHMTKLVYN-WSTDLVIATNGNEL 182 (304)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TCSCEEEECSSCCC
T ss_pred ceeeecCCCchhhhHHHHHHh-CCceEEEEeccccc
Confidence 57888888655 455555555 68899999887654
No 445
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=55.08 E-value=11 Score=33.97 Aligned_cols=34 Identities=18% Similarity=0.325 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~ 89 (284)
--+.|||+|..|..+|..|+.. +. .|.++|.-..
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~-~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK-QLGDVVLFDIAQG 40 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCceEEEEeCChH
Confidence 3588999999999999999984 66 8999987653
No 446
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=54.99 E-value=9.2 Score=34.18 Aligned_cols=37 Identities=30% Similarity=0.406 Sum_probs=30.6
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCC-CeEEEeccCCc
Q psy4112 52 LSEYDFVIIGGGVGGSVVANRLSENPK-WKVLLLESGED 89 (284)
Q Consensus 52 ~~~~d~iivg~G~~g~~~a~~l~~~~~-~~vl~lE~G~~ 89 (284)
.....|+|||.|-.|+.+|..|+.. + .++.|+|....
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~V 71 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDKV 71 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCBC
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCcc
Confidence 3457899999999999999999994 5 47888886653
No 447
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=54.82 E-value=8.3 Score=33.63 Aligned_cols=33 Identities=18% Similarity=0.190 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-.++|+|+|-+|..+|..|++. +.+|.|..+-.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~-G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQA-QQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHT-TCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 3589999999999999999995 78999987653
No 448
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=54.54 E-value=8.5 Score=36.34 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
...-|||.|.-|+.+|..|++ .+.+|++++.-+.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~-~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAK-HGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-TTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHH-CCCEEEEEECCHH
Confidence 456799999999999999999 5999999987764
No 449
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=54.24 E-value=12 Score=33.62 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=28.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC--eEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW--KVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G~ 88 (284)
..+.|||+|..|..+|..|+.. +. .|.++|.-.
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-QTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 5799999999999999999984 55 799998754
No 450
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=54.14 E-value=9 Score=36.46 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=28.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
-.++|+|+|-.|..+|..|++..+.+|.|+.+-
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSTTEEEEEEESS
T ss_pred CEEEEECChHHHHHHHHHHHhCCCCeEEEEECC
Confidence 358999999999999999998546788888764
No 451
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=53.87 E-value=4.2 Score=35.25 Aligned_cols=31 Identities=19% Similarity=0.209 Sum_probs=27.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEecc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLES 86 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~ 86 (284)
-.+.|||.|..|.++|..|.+ .+.+|.++++
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~-~G~~V~~~~~ 37 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDS-VGHYVTVLHA 37 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHH-TTCEEEECSS
T ss_pred cEEEEEeeCHHHHHHHHHHHH-CCCEEEEecC
Confidence 358899999999999999999 5899999876
No 452
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=53.82 E-value=11 Score=35.63 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
..+.|||.|..|..+|..|++ .+.+|.+.++.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~-~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVES-RGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHh-CCCEEEEEcCCH
Confidence 568999999999999999999 588999998654
No 453
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=53.75 E-value=16 Score=30.33 Aligned_cols=32 Identities=19% Similarity=0.326 Sum_probs=27.0
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 57 FVIIGG-GVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 57 ~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
++|.|+ |-.|..+|.+|++ .+.+|.++.+...
T Consensus 4 vlVtGasg~iG~~l~~~L~~-~g~~V~~~~r~~~ 36 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLAR-AGHTVIGIDRGQA 36 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTCEEEEEESSSS
T ss_pred EEEeCCCcHHHHHHHHHHHh-CCCEEEEEeCChh
Confidence 678876 8999999999999 4899999987543
No 454
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=53.67 E-value=13 Score=32.80 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.++|+|+|-+|..+|..|.+. +.+|.|+.+-..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~-G~~v~V~nRt~~ 152 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQ-GLQVSVLNRSSR 152 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 4689999999999999999995 688999876543
No 455
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=53.64 E-value=14 Score=33.33 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
--+.|||.|..|..+|.+|.. .+.+|++.+.-..
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~-~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKG-FNMRILYYSRTRK 184 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCC
T ss_pred CEEEEEccCHHHHHHHHHHHh-CCCEEEEECCCcc
Confidence 358999999999999999998 5899999987553
No 456
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=53.50 E-value=8.6 Score=38.62 Aligned_cols=32 Identities=19% Similarity=0.348 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.+.|||+|..|...|..|++ .+..|++.|.-+
T Consensus 316 kV~VIGaG~MG~~iA~~la~-aG~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSAS-KGTPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHH-TTCCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHh-CCCEEEEEECCH
Confidence 48899999999999999999 599999998654
No 457
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=53.49 E-value=13 Score=35.64 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=29.9
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
...+.|||.|..|..+|..|++ .+.+|.+.++-+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~-~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAAD-HGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 3578999999999999999999 589999998754
No 458
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=53.38 E-value=10 Score=34.59 Aligned_cols=35 Identities=23% Similarity=0.352 Sum_probs=29.5
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~ 89 (284)
...++|||+|..|+.+|..|+.. ++ ++.|++....
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEECCCcC
Confidence 45799999999999999999994 54 7889887653
No 459
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=53.17 E-value=10 Score=32.89 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=27.3
Q ss_pred cEEEECCChHHHHHHHHHhcCC-CCeEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENP-KWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~-~~~vl~lE~G~ 88 (284)
.+.|||.|..|..+|..|++.. +.+|.+.+..+
T Consensus 8 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 8 TIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred eEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 5889999999999999999732 57898887653
No 460
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=53.14 E-value=12 Score=33.88 Aligned_cols=32 Identities=22% Similarity=0.423 Sum_probs=25.7
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
.-.++|+|+|..|..+|..|++ ...|.+.+..
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~--~~~v~~~~~~ 47 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD--EFDVYIGDVN 47 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT--TSEEEEEESC
T ss_pred ccEEEEECCCHHHHHHHHHHhc--CCCeEEEEcC
Confidence 3469999999999999999987 4577776543
No 461
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=52.79 E-value=12 Score=30.64 Aligned_cols=33 Identities=24% Similarity=0.381 Sum_probs=28.4
Q ss_pred cEEEEC-CChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIG-GGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg-~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.++|.| +|..|..++.+|.+ .+.+|.++.+.+.
T Consensus 6 ~ilItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALN-RGFEVTAVVRHPE 39 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHT-TTCEEEEECSCGG
T ss_pred EEEEEcCCchHHHHHHHHHHH-CCCEEEEEEcCcc
Confidence 488999 59999999999999 4899999987654
No 462
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=52.75 E-value=13 Score=32.33 Aligned_cols=32 Identities=22% Similarity=0.166 Sum_probs=27.3
Q ss_pred ccEEEEC-CChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 55 YDFVIIG-GGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 55 ~d~iivg-~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
-.++|+| +|-+|..+|..|++. +.+|.++.+-
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-cCEEEEEECC
Confidence 3588999 899999999999994 8888888654
No 463
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=52.65 E-value=10 Score=34.32 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=27.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC--eEEEeccC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW--KVLLLESG 87 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G 87 (284)
-.+.|||+|..|..+|..|++. +. .|.++|.-
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~-~~~~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ-GITDELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCceEEEEecc
Confidence 3588999999999999999984 55 78998874
No 464
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=52.43 E-value=15 Score=33.32 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=30.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
.--+.|||+|..|..+|..+.+ -+.+|++++..++
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~-~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKE-MGYKIAVLDPTKN 48 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCEEEEEeCCCC
Confidence 3468999999999999999998 5999999987654
No 465
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=52.22 E-value=67 Score=32.38 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
--+.|||+|..|.-.|..++. .+..|+++|.-+.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~-aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFAR-VGISVVAVESDPK 350 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TTCEEEEECSSHH
T ss_pred cEEEEEcccHHHHHHHHHHHh-CCCchhcccchHh
Confidence 468899999999999999998 6999999997653
No 466
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=52.20 E-value=11 Score=33.67 Aligned_cols=31 Identities=26% Similarity=0.240 Sum_probs=26.6
Q ss_pred EEEECCChHHHHHHHHHhcCCCC--eEEEeccCC
Q psy4112 57 FVIIGGGVGGSVVANRLSENPKW--KVLLLESGE 88 (284)
Q Consensus 57 ~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G~ 88 (284)
+.|||+|..|..+|..|++. +. .|.++|.-+
T Consensus 3 I~ViGaG~vG~~la~~l~~~-~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLN-LDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHH-SCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCh
Confidence 68999999999999999984 55 799988754
No 467
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=52.12 E-value=14 Score=32.20 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCC---eEEEeccCCc
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKW---KVLLLESGED 89 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~---~vl~lE~G~~ 89 (284)
.+.|||+|..|...|..|.+. +. +|.+.++.+.
T Consensus 5 ~I~iIG~G~mG~aia~~l~~~-g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 5 NITFIGGGNMARNIVVGLIAN-GYDPNRICVTNRSLD 40 (280)
T ss_dssp CEEEESCSHHHHHHHHHHHHT-TCCGGGEEEECSSSH
T ss_pred EEEEEcccHHHHHHHHHHHHC-CCCCCeEEEEeCCHH
Confidence 478999999999999999984 67 8999987653
No 468
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=51.87 E-value=11 Score=33.75 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=27.7
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC--eEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW--KVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G~ 88 (284)
.-+.|||+|..|..+|..|+. .+. .|.++|.-.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~-~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISA-KGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHh-cCCCCEEEEEcCCc
Confidence 569999999999999999987 466 799998754
No 469
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=51.54 E-value=16 Score=32.08 Aligned_cols=33 Identities=18% Similarity=0.167 Sum_probs=28.3
Q ss_pred ccEEEECC-ChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGG-GVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
--++|.|+ |..|..++.+|.+ .+.+|.++.+..
T Consensus 20 ~~vlVtGatG~iG~~l~~~L~~-~G~~V~~~~r~~ 53 (347)
T 4id9_A 20 HMILVTGSAGRVGRAVVAALRT-QGRTVRGFDLRP 53 (347)
T ss_dssp -CEEEETTTSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CEEEEECCCChHHHHHHHHHHh-CCCEEEEEeCCC
Confidence 45899997 9999999999999 489999998765
No 470
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=51.47 E-value=14 Score=32.03 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=27.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCC-eEEEeccCC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKW-KVLLLESGE 88 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~ 88 (284)
.++|||+|-+|..++..|.+. +. +|.|..+-.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-GVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 799999999999999999984 66 888887643
No 471
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=50.75 E-value=18 Score=31.16 Aligned_cols=32 Identities=28% Similarity=0.554 Sum_probs=27.4
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 57 FVIIGG-GVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 57 ~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
++|.|+ |..|..++.+|.+ .+.+|.++.+...
T Consensus 3 vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~ 35 (312)
T 3ko8_A 3 IVVTGGAGFIGSHLVDKLVE-LGYEVVVVDNLSS 35 (312)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTCEEEEECCCSS
T ss_pred EEEECCCChHHHHHHHHHHh-CCCEEEEEeCCCC
Confidence 688897 9999999999999 4899999976543
No 472
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=50.70 E-value=15 Score=33.95 Aligned_cols=32 Identities=28% Similarity=0.410 Sum_probs=26.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCC--eEEEeccC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKW--KVLLLESG 87 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G 87 (284)
.++|+|+|-.|..+|..|++.+.. .|.+..+-
T Consensus 3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~ 36 (405)
T 4ina_A 3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRT 36 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECC
Confidence 478999999999999999986443 78887654
No 473
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=50.28 E-value=16 Score=32.83 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=27.9
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 57 FVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 57 ~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
++|+|+|..|..+|..+.+ .+.+|++++.++.
T Consensus 2 iliiG~g~~g~~~~~a~~~-~G~~v~~~~~~~~ 33 (369)
T 3aw8_A 2 IGILGGGQLGRMLALAGYP-LGLSFRFLDPSPE 33 (369)
T ss_dssp EEEECCSHHHHHHHHHHTT-BTCCEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHH-cCCEEEEEeCCCC
Confidence 6899999999999999887 5899999997754
No 474
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=49.96 E-value=15 Score=33.81 Aligned_cols=33 Identities=18% Similarity=0.285 Sum_probs=28.6
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
.--++|+|.|..|..+|.+|.+ -+.+|++.|.-
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~-~GakVvvsD~~ 207 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAE-AGAQLLVADTD 207 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 3568999999999999999999 59999988753
No 475
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=49.74 E-value=18 Score=32.88 Aligned_cols=36 Identities=33% Similarity=0.493 Sum_probs=30.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCcc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~~ 90 (284)
.--+.|||+|..|..+|..+.+ -+.+|++++..++.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~-lG~~viv~d~~~~~ 47 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQK-MGYKVVVLDPSEDC 47 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCCC
Confidence 3468999999999999999998 59999999876543
No 476
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=49.67 E-value=15 Score=35.40 Aligned_cols=34 Identities=21% Similarity=0.116 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
--++|||.|..|..+|.+|.. -+.+|++.|..+.
T Consensus 275 ktV~IiG~G~IG~~~A~~lka-~Ga~Viv~d~~~~ 308 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKG-QGARVSVTEIDPI 308 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHHH-CCCEEEEEeCCHH
Confidence 458999999999999999987 4889999997653
No 477
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=49.64 E-value=15 Score=33.29 Aligned_cols=33 Identities=15% Similarity=0.239 Sum_probs=27.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCC--eEEEeccC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKW--KVLLLESG 87 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G 87 (284)
.--+.|||+|..|..+|..|+.. +. .|.++|.-
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~-~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMK-DLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCceEEEEeCC
Confidence 45789999999999999999984 55 78888864
No 478
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=49.59 E-value=18 Score=31.46 Aligned_cols=31 Identities=26% Similarity=0.305 Sum_probs=27.1
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 57 FVIIGG-GVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 57 ~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
++|.|+ |..|..++.+|.+ .+.+|.++.+..
T Consensus 6 vlVtGatG~iG~~l~~~L~~-~G~~V~~~~r~~ 37 (345)
T 2z1m_A 6 ALITGIRGQDGAYLAKLLLE-KGYEVYGADRRS 37 (345)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTCEEEEECSCC
T ss_pred EEEECCCChHHHHHHHHHHH-CCCEEEEEECCC
Confidence 788887 9999999999999 489999997654
No 479
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=49.49 E-value=15 Score=34.77 Aligned_cols=34 Identities=21% Similarity=0.110 Sum_probs=29.5
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
.--++|||.|..|..+|.+|.. -+.+|++.|.-+
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra-~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKA-MGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHH-CCCEEEEEeCCh
Confidence 4578999999999999999988 589999998654
No 480
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=49.24 E-value=19 Score=30.94 Aligned_cols=31 Identities=23% Similarity=0.373 Sum_probs=26.8
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 57 FVIIGG-GVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 57 ~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
++|.|+ |..|..++.+|.+ .+.+|.++-+.+
T Consensus 3 ILVTGatGfIG~~L~~~L~~-~G~~V~~l~R~~ 34 (298)
T 4b4o_A 3 VLVGGGTGFIGTALTQLLNA-RGHEVTLVSRKP 34 (298)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTCEEEEEESSC
T ss_pred EEEECCCCHHHHHHHHHHHH-CCCEEEEEECCC
Confidence 688897 9999999999999 599999986643
No 481
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=49.23 E-value=14 Score=34.86 Aligned_cols=31 Identities=16% Similarity=0.231 Sum_probs=26.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 56 d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
.++|+|+|..|..+|..|++ .+.+|.++++-
T Consensus 5 ~VlViGaG~iG~~ia~~L~~-~G~~V~v~~R~ 35 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTD-SGIKVTVACRT 35 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHT-TTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHh-CcCEEEEEECC
Confidence 47899999999999999998 57889888764
No 482
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=48.75 E-value=17 Score=34.87 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-++.|||.|..|..+|..|++ .+.+|.+.++-+.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~-~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMND-HGFVVCAFNRTVS 38 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSTH
T ss_pred CEEEEEChhHHHHHHHHHHHH-CCCEEEEEeCCHH
Confidence 468999999999999999999 5899999987653
No 483
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=48.74 E-value=13 Score=33.90 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=27.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCC--eEEEeccC
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKW--KVLLLESG 87 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G 87 (284)
.--+.|||+|..|..+|..|+.. +. .|.++|.-
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~-g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK-DLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH-CCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECC
Confidence 35689999999999999999984 65 79999874
No 484
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=48.70 E-value=16 Score=32.88 Aligned_cols=33 Identities=27% Similarity=0.256 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
--+.|||.|..|..+|.+|.. .+.+|++.+.-.
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~-~G~~V~~~d~~~ 188 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKP-FGVQRFLYTGRQ 188 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGG-GTCCEEEEESSS
T ss_pred CEEEEECcCHHHHHHHHHHHH-CCCEEEEECCCC
Confidence 358899999999999999998 588999998654
No 485
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=48.68 E-value=17 Score=32.08 Aligned_cols=33 Identities=24% Similarity=0.263 Sum_probs=27.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~ 88 (284)
-.++|+|+|-+|..+|..|++. +. +|.|+.+-.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~-G~~~v~i~~R~~ 161 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTH-GVQKLQVADLDT 161 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEECCH
Confidence 4689999999999999999995 76 688876543
No 486
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=48.57 E-value=16 Score=34.54 Aligned_cols=36 Identities=14% Similarity=0.302 Sum_probs=30.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCc
Q psy4112 53 SEYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGED 89 (284)
Q Consensus 53 ~~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~ 89 (284)
....++|||+|..|+.+|..|+.. ++ ++.|+|....
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~a-Gvg~i~ivD~D~V 75 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALS-GFRQIHVIDMDTI 75 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHT-TCCCEEEEECCBC
T ss_pred cCCEEEEECcCHHHHHHHHHHHHc-CCCEEEEEcCCEe
Confidence 356799999999999999999994 55 7889986653
No 487
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=48.50 E-value=15 Score=32.41 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=27.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~ 88 (284)
-.++|+|+|-+|..+|..|.+. +. +|.|..+-.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKI-VRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-CCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 4689999999999999999984 76 788886654
No 488
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=48.49 E-value=17 Score=31.33 Aligned_cols=30 Identities=17% Similarity=0.399 Sum_probs=25.2
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeccC
Q psy4112 57 FVIIGG-GVGGSVVANRLSENPKWKVLLLESG 87 (284)
Q Consensus 57 ~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G 87 (284)
++|.|+ |..|..++.+|.+ .+.+|.++.+.
T Consensus 5 vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~ 35 (315)
T 2ydy_A 5 VLVTGATGLLGRAVHKEFQQ-NNWHAVGCGFR 35 (315)
T ss_dssp EEEETTTSHHHHHHHHHHHT-TTCEEEEEC--
T ss_pred EEEECCCcHHHHHHHHHHHh-CCCeEEEEccC
Confidence 788987 9999999999998 48999998754
No 489
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=48.44 E-value=19 Score=32.60 Aligned_cols=34 Identities=24% Similarity=0.197 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.+.|||.|..|..+|.+|.. .+.+|++.+.-..
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~-~G~~V~~~dr~~~ 198 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEA-FDCPISYFSRSKK 198 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHT-TTCCEEEECSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCEEEEECCCch
Confidence 358999999999999999998 5899999886543
No 490
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=48.11 E-value=13 Score=33.73 Aligned_cols=35 Identities=14% Similarity=0.136 Sum_probs=30.0
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCCc
Q psy4112 54 EYDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGED 89 (284)
Q Consensus 54 ~~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~~ 89 (284)
...++|||.|..|+.+|..|+. .++ ++.|+|....
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~-~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLIL-AGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHH-cCCCEEEEEECCCc
Confidence 4789999999999999999999 466 7899986653
No 491
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=47.91 E-value=17 Score=30.29 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=28.1
Q ss_pred ccEEEEC-CChHHHHHHHHHhcCCC-CeEEEeccCCc
Q psy4112 55 YDFVIIG-GGVGGSVVANRLSENPK-WKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg-~G~~g~~~a~~l~~~~~-~~vl~lE~G~~ 89 (284)
--++|.| +|-.|..+|.+|++. + .+|.++.+...
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~-G~~~V~~~~R~~~ 59 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADK-QTIKQTLFARQPA 59 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-TTEEEEEEESSGG
T ss_pred cEEEEEeCCcHHHHHHHHHHHhC-CCceEEEEEcChh
Confidence 3488999 699999999999994 7 89999877653
No 492
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=47.85 E-value=15 Score=31.55 Aligned_cols=32 Identities=25% Similarity=0.294 Sum_probs=27.5
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 56 DFVIIGG-GVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 56 d~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
-++|+|+ |..|..++.+|.+. +.+|.++.+..
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~ 38 (308)
T 1qyc_A 6 RILLIGATGYIGRHVAKASLDL-GHPTFLLVRES 38 (308)
T ss_dssp CEEEESTTSTTHHHHHHHHHHT-TCCEEEECCCC
T ss_pred EEEEEcCCcHHHHHHHHHHHhC-CCCEEEEECCc
Confidence 3899996 99999999999994 88999987764
No 493
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=47.84 E-value=19 Score=32.42 Aligned_cols=34 Identities=24% Similarity=0.223 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
--+.|||.|..|..+|.+|.. .+.+|++.+.-..
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~-~G~~V~~~d~~~~ 180 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIP-FGVKLYYWSRHRK 180 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGG-GTCEEEEECSSCC
T ss_pred CEEEEEccCHHHHHHHHHHHH-CCCEEEEECCCcc
Confidence 358899999999999999998 5899999887654
No 494
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=47.82 E-value=17 Score=32.67 Aligned_cols=32 Identities=9% Similarity=0.214 Sum_probs=27.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESG 87 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G 87 (284)
-.++|+|+|-+|..+|..|++. +. +|.|+.+-
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~-Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALD-GVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHC-CCCEEEEEECC
Confidence 4689999999999999999984 76 78888665
No 495
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=47.68 E-value=20 Score=31.50 Aligned_cols=33 Identities=24% Similarity=0.271 Sum_probs=28.3
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 56 DFVIIGG-GVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 56 d~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-++|.|+ |..|..++.+|.+ .+.+|.++.+...
T Consensus 27 ~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 27 TWLITGVAGFIGSNLLEKLLK-LNQVVIGLDNFST 60 (351)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-TTCEEEEEECCSS
T ss_pred eEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCCC
Confidence 5889995 9999999999999 4899999987653
No 496
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=53.37 E-value=3.9 Score=34.19 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeccCCc
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~~vl~lE~G~~ 89 (284)
-.+.|||.|..|..+|.+|.+ .+.+|.++++...
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~-~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQ-CGYSVVFGSRNPQ 53 (201)
Confidence 357899999999999999998 4788988876543
No 497
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=47.53 E-value=14 Score=33.56 Aligned_cols=32 Identities=16% Similarity=0.232 Sum_probs=27.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC--eEEEeccC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW--KVLLLESG 87 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~--~vl~lE~G 87 (284)
--+.|||+|..|..+|..|+.. +. .|.++|.-
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ-GIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCC
Confidence 4589999999999999999984 55 78898874
No 498
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=47.09 E-value=21 Score=31.11 Aligned_cols=32 Identities=28% Similarity=0.488 Sum_probs=27.0
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeccCC
Q psy4112 57 FVIIGG-GVGGSVVANRLSENPKWKVLLLESGE 88 (284)
Q Consensus 57 ~iivg~-G~~g~~~a~~l~~~~~~~vl~lE~G~ 88 (284)
++|.|+ |..|..++.+|.+..+.+|.++.+..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 35 (345)
T 2bll_A 3 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGS 35 (345)
T ss_dssp EEEETCSSHHHHHHHHHHHHSTTCEEEEEESCC
T ss_pred EEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 688887 99999999999984378999987654
No 499
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=46.66 E-value=20 Score=31.62 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=27.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeccCC
Q psy4112 55 YDFVIIGGGVGGSVVANRLSENPKW-KVLLLESGE 88 (284)
Q Consensus 55 ~d~iivg~G~~g~~~a~~l~~~~~~-~vl~lE~G~ 88 (284)
-.++|+|+|-+|..+|..|.+ .+. +|.|..+-.
T Consensus 127 k~vlvlGaGg~g~aia~~L~~-~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLD-QQPASITVTNRTF 160 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TCCSEEEEEESSH
T ss_pred CEEEEECchHHHHHHHHHHHh-cCCCeEEEEECCH
Confidence 458999999999999999998 474 898886643
No 500
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=46.56 E-value=22 Score=30.41 Aligned_cols=32 Identities=25% Similarity=0.543 Sum_probs=26.9
Q ss_pred EEEECC-ChHHHHHHHHHhcCCC-CeEEEeccCCc
Q psy4112 57 FVIIGG-GVGGSVVANRLSENPK-WKVLLLESGED 89 (284)
Q Consensus 57 ~iivg~-G~~g~~~a~~l~~~~~-~~vl~lE~G~~ 89 (284)
++|.|+ |..|..++.+|.+. + .+|.++.+...
T Consensus 2 vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~ 35 (310)
T 1eq2_A 2 IIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKD 35 (310)
T ss_dssp EEEETTTSHHHHHHHHHHHTT-TCCCEEEEECCSS
T ss_pred EEEEcCccHHHHHHHHHHHHC-CCcEEEEEccCCC
Confidence 688887 99999999999994 7 88999876543
Done!