Your job contains 1 sequence.
>psy4112
MLSTLAKLTLIVLICHVHWTHNILLESVYQKYLRQQGLEFRENIFLGNKPILSEYDFVII
GGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLEKNEEH
PQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYFLK
SENNTSEFLDADIHSREGPLKVTNIPYQNLLTEKFTQAKEGPLKVTNIPYQNLLTEKFTQ
AACELGYRIYDYTGIEPATEGFSKLQSTLSKGQRYSANRAYLKS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4112
(284 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0030588 - symbol:CG9521 species:7227 "Drosophila m... 416 1.0e-38 1
FB|FBgn0030591 - symbol:CG9517 species:7227 "Drosophila m... 350 4.7e-38 2
FB|FBgn0030590 - symbol:CG9518 species:7227 "Drosophila m... 406 3.2e-37 1
FB|FBgn0030589 - symbol:CG9519 species:7227 "Drosophila m... 397 1.6e-36 1
FB|FBgn0030587 - symbol:CG9522 species:7227 "Drosophila m... 386 2.5e-35 1
FB|FBgn0030586 - symbol:CG12539 species:7227 "Drosophila ... 380 1.3e-34 1
FB|FBgn0030598 - symbol:CG9503 species:7227 "Drosophila m... 378 2.2e-34 1
FB|FBgn0039415 - symbol:CG6142 species:7227 "Drosophila m... 369 2.0e-33 1
FB|FBgn0001112 - symbol:Gld "Glucose dehydrogenase" speci... 312 3.9e-27 1
FB|FBgn0030596 - symbol:CG12398 species:7227 "Drosophila ... 306 1.8e-26 1
FB|FBgn0030594 - symbol:CG9509 species:7227 "Drosophila m... 278 2.0e-26 2
FB|FBgn0030592 - symbol:CG9514 species:7227 "Drosophila m... 303 5.4e-26 1
UNIPROTKB|Q47YL1 - symbol:CPS_3434 "Oxidoreductase, GMC f... 278 1.2e-23 1
TIGR_CMR|CPS_3434 - symbol:CPS_3434 "oxidoreductase, GMC ... 278 1.2e-23 1
FB|FBgn0030593 - symbol:CG9512 species:7227 "Drosophila m... 279 1.5e-23 1
TIGR_CMR|CPS_4010 - symbol:CPS_4010 "choline dehydrogenas... 215 5.6e-23 2
UNIPROTKB|Q488U4 - symbol:CPS_0670 "Oxidoreductase, GMC f... 257 2.4e-21 1
TIGR_CMR|CPS_0670 - symbol:CPS_0670 "oxidoreductase, GMC ... 257 2.4e-21 1
TIGR_CMR|SPO_2359 - symbol:SPO_2359 "oxidoreductase, GMC ... 240 1.7e-19 1
TIGR_CMR|SPO_A0386 - symbol:SPO_A0386 "oxidoreductase, GM... 230 2.1e-18 1
TIGR_CMR|SPO_1088 - symbol:SPO_1088 "choline dehydrogenas... 227 4.8e-18 1
TIGR_CMR|SPO_0971 - symbol:SPO_0971 "oxidoreductase, GMC ... 221 2.0e-17 1
UNIPROTKB|E1C003 - symbol:CHDH "Choline dehydrogenase" sp... 191 2.9e-17 2
TIGR_CMR|SPO_0190 - symbol:SPO_0190 "oxidoreductase, GMC ... 219 3.3e-17 1
UNIPROTKB|P17444 - symbol:betA "choline dehydrogenase" sp... 218 4.6e-17 1
TIGR_CMR|CPS_1334 - symbol:CPS_1334 "choline dehydrogenas... 212 2.1e-16 1
UNIPROTKB|P64263 - symbol:MT1316 "Uncharacterized GMC-typ... 190 2.4e-16 2
UNIPROTKB|E2R4L5 - symbol:CHDH "Uncharacterized protein" ... 171 3.8e-14 2
WB|WBGene00007917 - symbol:C34C6.4 species:6239 "Caenorha... 193 2.6e-13 1
TIGR_CMR|SPO_A0283 - symbol:SPO_A0283 "oxidoreductase, GM... 155 3.6e-13 2
RGD|735166 - symbol:Chdh "choline dehydrogenase" species:... 185 4.0e-12 1
MGI|MGI:1860776 - symbol:Chdh "choline dehydrogenase" spe... 184 5.3e-12 1
UNIPROTKB|Q8NE62 - symbol:CHDH "Choline dehydrogenase, mi... 180 1.8e-11 1
UNIPROTKB|F1SH89 - symbol:CHDH "Choline dehydrogenase" sp... 177 4.4e-11 1
ASPGD|ASPL0000014551 - symbol:AN3531 species:162425 "Emer... 169 3.7e-10 1
UNIPROTKB|E1BES2 - symbol:CHDH "Choline dehydrogenase" sp... 168 5.6e-10 1
ASPGD|ASPL0000037024 - symbol:AN3229 species:162425 "Emer... 165 1.3e-09 1
ASPGD|ASPL0000067640 - symbol:AN7267 species:162425 "Emer... 160 4.5e-09 1
UNIPROTKB|G4N2I1 - symbol:MGG_07580 "Glucose oxidase" spe... 160 5.0e-09 1
ASPGD|ASPL0000014523 - symbol:xptC species:162425 "Emeric... 159 7.1e-09 1
ASPGD|ASPL0000032264 - symbol:AN8329 species:162425 "Emer... 154 2.8e-08 1
FB|FBgn0037896 - symbol:ninaG "ninaG" species:7227 "Droso... 152 4.2e-08 1
ASPGD|ASPL0000034263 - symbol:AN2704 species:162425 "Emer... 150 9.0e-08 1
UNIPROTKB|G4N440 - symbol:MGG_16853 "Uncharacterized prot... 149 1.1e-07 1
ASPGD|ASPL0000027758 - symbol:gmcA species:162425 "Emeric... 148 1.2e-07 1
UNIPROTKB|C9J7D8 - symbol:CHDH "Choline dehydrogenase, mi... 124 1.7e-07 1
UNIPROTKB|G4NA69 - symbol:MGG_15347 "Choline dehydrogenas... 144 3.8e-07 1
ASPGD|ASPL0000042071 - symbol:AN9011 species:162425 "Emer... 139 1.5e-06 1
ASPGD|ASPL0000038310 - symbol:AN3206 species:162425 "Emer... 136 2.9e-06 1
ASPGD|ASPL0000015753 - symbol:AN4212 species:162425 "Emer... 135 4.1e-06 1
ASPGD|ASPL0000055311 - symbol:AN9348 species:162425 "Emer... 110 7.1e-05 2
UNIPROTKB|G4MYF5 - symbol:MGG_10479 "Oxidoreductase" spec... 119 0.00029 1
UNIPROTKB|P95043 - symbol:MT0724 "Probable dehydrogenase"... 114 0.00070 1
>FB|FBgn0030588 [details] [associations]
symbol:CG9521 species:7227 "Drosophila melanogaster"
[GO:0008812 "choline dehydrogenase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0006066
"alcohol metabolic process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00624 GO:GO:0050660 EMBL:AE014298
GO:GO:0006066 eggNOG:COG2303 GO:GO:0008812
GeneTree:ENSGT00530000063260 OrthoDB:EOG4N2Z3Z RefSeq:NP_572977.1
UniGene:Dm.31097 ProteinModelPortal:Q9VY10 SMR:Q9VY10 PaxDb:Q9VY10
PRIDE:Q9VY10 EnsemblMetazoa:FBtr0073985 GeneID:32414
KEGG:dme:Dmel_CG9521 UCSC:CG9521-RA FlyBase:FBgn0030588
InParanoid:Q9VY10 OMA:DHERDED PhylomeDB:Q9VY10 GenomeRNAi:32414
NextBio:778334 ArrayExpress:Q9VY10 Bgee:Q9VY10 Uniprot:Q9VY10
Length = 621
Score = 416 (151.5 bits), Expect = 1.0e-38, P = 1.0e-38
Identities = 87/203 (42%), Positives = 125/203 (61%)
Query: 21 HNILLESVYQKYLR--QQGLEFRENIFLGNKPIL-SEYDFXXXXXXXXXXXXANRLSENP 77
+N+L E++ +LR Q +E EN N IL SEYDF A RLSENP
Sbjct: 28 NNVLFETI--NFLRRGQADVEL-ENY--DNNVILDSEYDFIVVGAGTAGCALAARLSENP 82
Query: 78 KWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLEKNEEHPQCLGMYNDQCPCPRGK 137
+W+VLLLE+G E + ++P++AHF L NW Y+ + ++ H CL M N++C PRGK
Sbjct: 83 QWRVLLLEAGGPERLVMDVPIVAHFLQLGEMNWKYRTQPSD-HA-CLAMNNNRCNWPRGK 140
Query: 138 GLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYFLKSENNTSEFLDADIHSRE 197
+GGSS+LNYM+YTRGN++DYD +EA GN GW + VL YF K E ++ + D R
Sbjct: 141 VMGGSSVLNYMMYTRGNRRDYDRWEALGNPGWSFKDVLPYFKKYEGSSVPDAEEDYVGRN 200
Query: 198 GPLKVTNIPYQNLLTEKFTQAKE 220
GP+KV+ + +++ + E F A +
Sbjct: 201 GPVKVSYVNWRSKIAEAFVDAAQ 223
>FB|FBgn0030591 [details] [associations]
symbol:CG9517 species:7227 "Drosophila melanogaster"
[GO:0004344 "glucose dehydrogenase activity" evidence=ISS]
[GO:0006066 "alcohol metabolic process" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008812 "choline
dehydrogenase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] InterPro:IPR000172
InterPro:IPR007867 Pfam:PF00732 Pfam:PF05199 PROSITE:PS00623
PROSITE:PS00624 GO:GO:0050660 EMBL:AE014298 KO:K00108
GeneTree:ENSGT00530000063260 GO:GO:0004344 HSSP:Q945K2
UniGene:Dm.29217 GeneID:32417 KEGG:dme:Dmel_CG9517
FlyBase:FBgn0030591 GenomeRNAi:32417 NextBio:778349
RefSeq:NP_572980.2 ProteinModelPortal:Q9VY07 SMR:Q9VY07
STRING:Q9VY07 PRIDE:Q9VY07 EnsemblMetazoa:FBtr0073982
UCSC:CG9517-RA InParanoid:Q9VY07 OMA:RDGFYNT PhylomeDB:Q9VY07
ArrayExpress:Q9VY07 Bgee:Q9VY07 Uniprot:Q9VY07
Length = 865
Score = 350 (128.3 bits), Expect = 4.7e-38, Sum P(2) = 4.7e-38
Identities = 73/169 (43%), Positives = 96/169 (56%)
Query: 51 ILSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNW 110
I +YDF ANRLSE W VLLLE+G DE +++P LA + LT +W
Sbjct: 292 IRRQYDFVVIGGGSAGAVVANRLSEVRNWTVLLLEAGGDETEISDVPALAGYLQLTELDW 351
Query: 111 GYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWG 170
Y+ + C M D+C PRGK LGGSS+LN M+Y RG+K DY+ + + GN GW
Sbjct: 352 KYQTTPSSTRQYCQAMKGDRCFWPRGKVLGGSSVLNAMVYVRGSKNDYNHWASLGNPGWD 411
Query: 171 YDSVLKYFLKSENNTSEFL-DADIHSREGPLKVTNIPYQNLLTEKFTQA 218
YDS+LKYFLKSE+ + +L H G L V P++ L+ F QA
Sbjct: 412 YDSMLKYFLKSEDVRNPYLAKTPYHETGGYLTVQEAPWRTPLSIAFLQA 460
Score = 94 (38.1 bits), Expect = 4.7e-38, Sum P(2) = 4.7e-38
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 221 GPLKVTNIPYQNLLTEKFTQAACELGYRIYDYTGIEPATEGFSKLQSTLSKGQRYSANRA 280
G L V P++ L+ F QA E+GY D G + GF QST+ +G R S +A
Sbjct: 440 GYLTVQEAPWRTPLSIAFLQAGIEMGYENRDINGAQQT--GFMLTQSTIRRGARCSTGKA 497
Query: 281 YLK 283
+++
Sbjct: 498 FIR 500
>FB|FBgn0030590 [details] [associations]
symbol:CG9518 species:7227 "Drosophila melanogaster"
[GO:0008812 "choline dehydrogenase activity" evidence=ISS]
[GO:0006066 "alcohol metabolic process" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0046331 "lateral
inhibition" evidence=IMP] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00623 PROSITE:PS00624 GO:GO:0050660 GO:GO:0006066
GO:GO:0046331 eggNOG:COG2303 GO:GO:0008812 EMBL:BT010274
ProteinModelPortal:Q6NR10 SMR:Q6NR10 STRING:Q6NR10 PRIDE:Q6NR10
FlyBase:FBgn0030590 InParanoid:Q6NR10 OrthoDB:EOG4N2Z40
ArrayExpress:Q6NR10 Bgee:Q6NR10 Uniprot:Q6NR10
Length = 703
Score = 406 (148.0 bits), Expect = 3.2e-37, P = 3.2e-37
Identities = 88/218 (40%), Positives = 128/218 (58%)
Query: 2 LSTLAKLTLIVLICHVHWTHNILLESVYQKYLRQQGLEFRENIFLGNKPILSEYDFXXXX 61
++T+ K T V+ + W ++L ++ Y R ++ E+ L + EYDF
Sbjct: 8 ITTVIKSTFGVVTTGL-WLIPLMLAAI--TYYRYDAVD-PESRPLDQLNLYPEYDFIVVG 63
Query: 62 XXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLEKNEEHP 121
ANRLSE KWKVLL+E+G DEN +++P LA + L+ +W YK E + +
Sbjct: 64 SGSAGAVVANRLSEVRKWKVLLIEAGPDENEISDVPSLAAYLQLSKLDWAYKTEPSTK-- 121
Query: 122 QCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYFLKS 181
CLGM N++C PRG+ LGGSS+LNYM+Y RGN+ DYD + + GN GW YD+VL+YF KS
Sbjct: 122 ACLGMQNNRCNWPRGRVLGGSSVLNYMLYVRGNRHDYDHWASLGNPGWDYDNVLRYFKKS 181
Query: 182 ENNTSEFL-DADIHSREGPLKVTNIPYQNLLTEKFTQA 218
E+N + +L + H R G L V P+ + L F +A
Sbjct: 182 EDNRNPYLANNKYHGRGGLLTVQESPWHSPLVAAFVEA 219
>FB|FBgn0030589 [details] [associations]
symbol:CG9519 species:7227 "Drosophila melanogaster"
[GO:0008812 "choline dehydrogenase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0006066
"alcohol metabolic process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00624 GO:GO:0050660 EMBL:AE014298
GO:GO:0006066 eggNOG:COG2303 KO:K00108 GO:GO:0008812
GeneTree:ENSGT00530000063260 EMBL:AY058447 RefSeq:NP_572978.1
UniGene:Dm.29216 SMR:Q9VY09 MINT:MINT-1567111 STRING:Q9VY09
EnsemblMetazoa:FBtr0073984 GeneID:32415 KEGG:dme:Dmel_CG9519
UCSC:CG9519-RA FlyBase:FBgn0030589 InParanoid:Q9VY09 OMA:NETRWSS
OrthoDB:EOG4N2Z3Z GenomeRNAi:32415 NextBio:778339 Uniprot:Q9VY09
Length = 622
Score = 397 (144.8 bits), Expect = 1.6e-36, P = 1.6e-36
Identities = 83/201 (41%), Positives = 117/201 (58%)
Query: 20 THNILLESVYQKYLRQQGLEFRENIFLGNKPILSEYDFXXXXXXXXXXXXANRLSENPKW 79
T N L++ + + Y R Q EN+ G + I ++YDF A RLSENP+W
Sbjct: 29 TGNALMDML-EIYRRGQAQLDLENLDEG-QVITTKYDFIVVGAGTAGCALAARLSENPRW 86
Query: 80 KVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGL 139
+VLLLE+G EN +IP++AH L NW YK E + + CL M N++C PRGK +
Sbjct: 87 RVLLLEAGGPENYAMDIPIVAHLLQLGEINWKYKTEPSNSY--CLAMNNNRCNWPRGKVM 144
Query: 140 GGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYFLKSENNTSEFLDADIHSREGP 199
GGSS+LNYM+YTRGN++DYD + GN GW Y+ VL YF K E + D ++ R GP
Sbjct: 145 GGSSVLNYMMYTRGNRRDYDRWARLGNPGWSYEEVLPYFKKYEGSVVPDADENLVGRNGP 204
Query: 200 LKVTNIPYQNLLTEKFTQAKE 220
+KV+ + + + F A +
Sbjct: 205 VKVSYSETRTRIADAFVGATQ 225
>FB|FBgn0030587 [details] [associations]
symbol:CG9522 species:7227 "Drosophila melanogaster"
[GO:0008812 "choline dehydrogenase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0006066
"alcohol metabolic process" evidence=IEA] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00623 PROSITE:PS00624 GO:GO:0050660
EMBL:AE014298 GO:GO:0006066 eggNOG:COG2303 GO:GO:0008812
GeneTree:ENSGT00530000063260 EMBL:AY113456 RefSeq:NP_644677.1
UniGene:Dm.29215 SMR:Q9VY11 IntAct:Q9VY11 MINT:MINT-853325
EnsemblMetazoa:FBtr0073986 GeneID:32413 KEGG:dme:Dmel_CG9522
UCSC:CG9522-RA FlyBase:FBgn0030587 InParanoid:Q9VY11 OMA:HILTLAR
OrthoDB:EOG4RXWFB GenomeRNAi:32413 NextBio:778329 Uniprot:Q9VY11
Length = 616
Score = 386 (140.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 98/258 (37%), Positives = 138/258 (53%)
Query: 5 LAKLTLIVLICHVHWTHNILLESVYQKYLRQQGLEFRENI-FLGNKPILSEYDFXXXXXX 63
L +L ++LI +H + L+ LR+ GL N+ F + P YDF
Sbjct: 6 LTQLLFLLLIPLIHSQRSSQLDE-----LRRLGLGNVVNVPFFSDVP-QRNYDFIIVGGG 59
Query: 64 XXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLA-HFNSLTHFNWGYKLEKNEEHPQ 122
A RLSENP W V L+E+G ENI +PLLA H S T NWGY + H
Sbjct: 60 AAGCTLAARLSENPNWSVFLIEAGGVENIVHQVPLLAAHLQS-TASNWGYN-STPQRHA- 116
Query: 123 CLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYFLKSE 182
C GM +++C PRGK LGG+S +NYMIY RGN++D+D + AAGN GW YD VL YFL+SE
Sbjct: 117 CRGMPDNKCALPRGKVLGGTSSINYMIYNRGNRRDFDAWAAAGNPGWSYDEVLPYFLRSE 176
Query: 183 NNTSEFLD-ADIHSREGPLKVTNIPYQNLLTEKFTQA-KEGPLKVTNIPYQNLLTEKFTQ 240
+ + L+ + H+ GPL V ++ ++ L + +A +E T+ ++ L + Q
Sbjct: 177 HAQLQGLEHSPYHNHSGPLSVEDVRHRTRLAHAYIRAAQEAGHPRTDYNGESQLGVSYVQ 236
Query: 241 AACELGYRIYDYTG-IEP 257
A G R + IEP
Sbjct: 237 ATTLKGRRHSAFRAYIEP 254
>FB|FBgn0030586 [details] [associations]
symbol:CG12539 species:7227 "Drosophila melanogaster"
[GO:0004344 "glucose dehydrogenase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008812
"choline dehydrogenase activity" evidence=IEA] [GO:0006066 "alcohol
metabolic process" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00623 PROSITE:PS00624 GO:GO:0050660
EMBL:AE014298 GO:GO:0006066 eggNOG:COG2303 GO:GO:0008812
GeneTree:ENSGT00530000063260 GO:GO:0004344 EMBL:AY075498
RefSeq:NP_572976.1 UniGene:Dm.29214 SMR:Q8SXY8 STRING:Q8SXY8
EnsemblMetazoa:FBtr0073987 GeneID:32412 KEGG:dme:Dmel_CG12539
UCSC:CG12539-RA FlyBase:FBgn0030586 InParanoid:Q8SXY8 KO:K00115
OMA:IHMPVGF OrthoDB:EOG4BNZSV GenomeRNAi:32412 NextBio:778324
Uniprot:Q8SXY8
Length = 626
Score = 380 (138.8 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 98/254 (38%), Positives = 135/254 (53%)
Query: 33 LRQQGL-EFRENIFLGNKPI-LSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDE 90
L Q GL E N P LS YDF A RLSENP+ V L+E+G E
Sbjct: 34 LNQVGLVNLIEQATRPNVPRDLSNYDFIVIGAGAAGCTLAARLSENPQVSVALIEAGGVE 93
Query: 91 NIYTNIPLLAHFNSLTHFNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIY 150
NI P++A + T NWGYK + C GM N++C PRGK LGG+S +NYMIY
Sbjct: 94 NIAHLTPVVAGYLQQTSSNWGYK--SVPQKLSCHGMNNNECALPRGKILGGTSSINYMIY 151
Query: 151 TRGNKKDYDTYEAAGNKGWGYDSVLKYFLKSENNTSEFLD-ADIHSREGPLKVTNIPYQN 209
RGN++D+D + AAGN GW YD VL YFL+SE+ + L+ + H+ GPL V + +++
Sbjct: 152 NRGNRRDFDAWAAAGNPGWSYDEVLPYFLRSEHAQLQGLEQSPYHNHSGPLSVEYVRFRS 211
Query: 210 LLTEKFTQAK-EGPLKVTNIPYQNLLTEKFTQAACELGYRIYDYTG-IEPATEGFSKLQS 267
+ + F +A E L T+ ++ L + QA G R Y+ I+P + S LQ
Sbjct: 212 QMVDAFVEASVESGLPRTDYNGESQLGVSYVQANTLNGRRHSAYSAYIKPVRDLRSNLQI 271
Query: 268 -TLSKGQRYSANRA 280
T S+ R + A
Sbjct: 272 FTFSQVTRILIDEA 285
>FB|FBgn0030598 [details] [associations]
symbol:CG9503 species:7227 "Drosophila melanogaster"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0006066
"alcohol metabolic process" evidence=IEA] [GO:0008812 "choline
dehydrogenase activity" evidence=IEA] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00623 PROSITE:PS00624 GO:GO:0050660
GO:GO:0006066 eggNOG:COG2303 GO:GO:0008812 OrthoDB:EOG4N2Z40
EMBL:BT010022 ProteinModelPortal:Q7YU28 SMR:Q7YU28 PRIDE:Q7YU28
FlyBase:FBgn0030598 InParanoid:Q7YU28 ArrayExpress:Q7YU28
Bgee:Q7YU28 Uniprot:Q7YU28
Length = 626
Score = 378 (138.1 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 77/174 (44%), Positives = 99/174 (56%)
Query: 46 LGNKPILSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSL 105
+G IL YDF ANRL+E W VLLLE+G DE T++PL+A + L
Sbjct: 51 VGGDDILDHYDFIVIGAGSAGAVVANRLTEVENWNVLLLEAGGDETELTDVPLMAGYLQL 110
Query: 106 THFNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAG 165
+ +W YK E + CL M +C PRGK LGGSS+LNYM+Y RG+K DYD +EA G
Sbjct: 111 SKIDWQYKTEPSGT--SCLAMQGGRCNWPRGKVLGGSSVLNYMLYLRGSKHDYDNWEAMG 168
Query: 166 NKGWGYDSVLKYFLKSENNTSEFL-DADIHSREGPLKVTNIPYQNLLTEKFTQA 218
N W Y L YF KSE+NT+++L + H+ G L V PY L F +A
Sbjct: 169 NPSWSYRDALYYFKKSEDNTNQYLANTPYHATGGYLTVGEAPYHTPLAASFVEA 222
>FB|FBgn0039415 [details] [associations]
symbol:CG6142 species:7227 "Drosophila melanogaster"
[GO:0006066 "alcohol metabolic process" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0008812
"choline dehydrogenase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00623 PROSITE:PS00624 EMBL:AE014297
GO:GO:0050660 GO:GO:0006066 GO:GO:0008812
GeneTree:ENSGT00530000063260 RefSeq:NP_651466.1
ProteinModelPortal:Q9VBG8 SMR:Q9VBG8 PRIDE:Q9VBG8
EnsemblMetazoa:FBtr0084987 GeneID:43178 KEGG:dme:Dmel_CG6142
UCSC:CG6142-RA FlyBase:FBgn0039415 InParanoid:Q9VBG8 OMA:TCRRLGH
OrthoDB:EOG46T1GG PhylomeDB:Q9VBG8 GenomeRNAi:43178 NextBio:832564
ArrayExpress:Q9VBG8 Bgee:Q9VBG8 Uniprot:Q9VBG8
Length = 616
Score = 369 (135.0 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 83/240 (34%), Positives = 123/240 (51%)
Query: 11 IVLICHVHWTHNILLESVYQKYLRQQGLEFRENIFLGNKPILSEYDFXXXXXXXXXXXXA 70
+++IC W + + R F N L EYDF A
Sbjct: 6 VLIICL--WYIQVTWSQLLVDLARDFETSFLNNRIPDTTRFLPEYDFIIVGAGSAGCVMA 63
Query: 71 NRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLEKNEEHPQCLGMYNDQ 130
NRLSE VLLLE+G+ E +++PL A +T +NWGYK E E H C G+
Sbjct: 64 NRLSEISSASVLLLEAGDQETFISDVPLTAALTQMTRYNWGYKAEPTE-HA-CQGLKGGV 121
Query: 131 CPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYFLKSEN-NTSEFL 189
C P+G+G+GG+S++N+M+YTRG+++DYD + AA N GW YD +L YF KSE E
Sbjct: 122 CNWPKGRGVGGTSLINFMLYTRGHRRDYDEWAAANNSGWSYDELLPYFRKSERIGIPELY 181
Query: 190 DADIHSREGPLKVTNIPYQNLLTEKFTQA-KEGPLKVTNIPYQNLLTEKFTQAACELGYR 248
+ H R G L V Y++ L + F ++ +E ++T+ ++L+ +QA G R
Sbjct: 182 KSPYHGRNGQLDVQYTDYRSQLLKAFLKSGREMGYEITDPNGEHLMGFARSQATIRNGRR 241
>FB|FBgn0001112 [details] [associations]
symbol:Gld "Glucose dehydrogenase" species:7227 "Drosophila
melanogaster" [GO:0004344 "glucose dehydrogenase activity"
evidence=NAS;TAS] [GO:0006006 "glucose metabolic process"
evidence=TAS] [GO:0008364 "pupal chitin-based cuticle development"
evidence=TAS] [GO:0042335 "cuticle development" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0046693 "sperm
storage" evidence=IMP;TAS] [GO:0008812 "choline dehydrogenase
activity" evidence=IEA] [GO:0006066 "alcohol metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00623 PROSITE:PS00624 EMBL:AE014297 GO:GO:0005576
GO:GO:0050660 GO:GO:0046693 GO:GO:0006006 GO:GO:0006066
eggNOG:COG2303 KO:K00108 GO:GO:0008812 EMBL:M29298 EMBL:X13582
PIR:A39019 RefSeq:NP_477503.1 ProteinModelPortal:P18173 SMR:P18173
IntAct:P18173 MINT:MINT-1002609 STRING:P18173 PaxDb:P18173
GeneID:40875 KEGG:dme:Dmel_CG1152 CTD:40875 FlyBase:FBgn0001112
HOGENOM:HOG000219185 InParanoid:P18173 OrthoDB:EOG4N2Z45
GenomeRNAi:40875 NextBio:821084 Bgee:P18173 GermOnline:CG1152
GO:GO:0004344 GO:GO:0008364 Uniprot:P18173
Length = 625
Score = 312 (114.9 bits), Expect = 3.9e-27, P = 3.9e-27
Identities = 73/197 (37%), Positives = 102/197 (51%)
Query: 54 EYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYK 113
EYDF A+RLSE P+WKVLL+E+G DE + IP + F + + Y+
Sbjct: 64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSM--FLNFIGSDIDYR 121
Query: 114 LEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDS 173
E CL +C PRGK LGG+S+LN M+Y RGN++DYD + A GN GW Y+
Sbjct: 122 YNTEPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYND 181
Query: 174 VLKYFLKSENNTS-EFLDADIHSREGPLKVTNIPYQNLLTEKFTQA-KEGPLKVTNIPYQ 231
VL +F KSE+N + + + H++ G L V PY L+ +A +E V ++ Q
Sbjct: 182 VLPFFKKSEDNLDLDEVGTEYHAKGGLLPVGKFPYNPPLSYAILKAGEELGFSVHDLNGQ 241
Query: 232 NLLTEKFTQAACELGYR 248
N Q G R
Sbjct: 242 NSTGFMIAQMTARNGIR 258
>FB|FBgn0030596 [details] [associations]
symbol:CG12398 species:7227 "Drosophila melanogaster"
[GO:0004344 "glucose dehydrogenase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0008812
"choline dehydrogenase activity" evidence=IEA] [GO:0006066 "alcohol
metabolic process" evidence=IEA] [GO:0042600 "chorion"
evidence=IDA] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00624 GO:GO:0050660 EMBL:AE014298 GO:GO:0006066
GO:GO:0008812 GO:GO:0042600 GeneTree:ENSGT00530000063260
GO:GO:0004344 KO:K00115 RefSeq:NP_572985.1 UniGene:Dm.31098
HSSP:P13006 ProteinModelPortal:Q9VY02 SMR:Q9VY02 STRING:Q9VY02
PRIDE:Q9VY02 EnsemblMetazoa:FBtr0073976 GeneID:32422
KEGG:dme:Dmel_CG12398 UCSC:CG12398-RA FlyBase:FBgn0030596
InParanoid:Q9VY02 OMA:LTVETHA OrthoDB:EOG408KQJ PhylomeDB:Q9VY02
GenomeRNAi:32422 NextBio:778376 ArrayExpress:Q9VY02 Bgee:Q9VY02
Uniprot:Q9VY02
Length = 633
Score = 306 (112.8 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 64/167 (38%), Positives = 92/167 (55%)
Query: 55 YDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKL 114
YDF A RLSENP+W VLLLE+G DE + ++P L + ++W Y
Sbjct: 57 YDFIVIGGGSAGCVLAARLSENPEWSVLLLEAGGDEPLLIDLPQLYPVFQRSPWDWKYLT 116
Query: 115 EKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSV 174
E ++ + CL M + +C PR K LGG S +N M+Y RGN++DYD + A GN GW YD++
Sbjct: 117 EPSDRY--CLAMEDQRCFWPRAKVLGGCSSINAMMYIRGNRRDYDQWAALGNPGWNYDNI 174
Query: 175 LKYFLKSEN-NTSEFLDADIHSREGPLKVTNIPYQNLLTEKFTQAKE 220
L YF K E+ F + H GP+ V + + L + F +A +
Sbjct: 175 LHYFRKLEDMRVPGFEHSPYHGHGGPISVERYRFPSPLLDIFMRAAQ 221
>FB|FBgn0030594 [details] [associations]
symbol:CG9509 species:7227 "Drosophila melanogaster"
[GO:0008812 "choline dehydrogenase activity" evidence=ISS]
[GO:0007498 "mesoderm development" evidence=IEP] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006066 "alcohol
metabolic process" evidence=IEA] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00623 PROSITE:PS00624 GO:GO:0007498
GO:GO:0050660 EMBL:AE014298 GO:GO:0006066 KO:K00108 GO:GO:0008812
GeneTree:ENSGT00530000063260 FlyBase:FBgn0030594 RefSeq:NP_572983.1
UniGene:Dm.8299 ProteinModelPortal:Q9VY04 SMR:Q9VY04 IntAct:Q9VY04
MINT:MINT-1626393 STRING:Q9VY04 PRIDE:Q9VY04
EnsemblMetazoa:FBtr0073978 GeneID:32420 KEGG:dme:Dmel_CG9509
UCSC:CG9509-RA InParanoid:Q9VY04 PhylomeDB:Q9VY04 GenomeRNAi:32420
NextBio:778366 ArrayExpress:Q9VY04 Bgee:Q9VY04 Uniprot:Q9VY04
Length = 646
Score = 278 (102.9 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 56/131 (42%), Positives = 78/131 (59%)
Query: 52 LSE-YDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNW 110
LS+ YDF A+RLSENP W+VL+LE+G D + + +P L T+F W
Sbjct: 65 LSQPYDFVVIGAGSAGSVVASRLSENPDWRVLVLEAGGDPPVESELPALFFGLQHTNFTW 124
Query: 111 GYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWG 170
Y E ++E C M + +C PRGK LGGS +N M+Y RGN++D+D + A G+ GW
Sbjct: 125 NYFTEPSDE--ACQAMKDGRCYWPRGKMLGGSGGVNAMLYVRGNRRDFDGWAAMGSTGWS 182
Query: 171 YDSVLKYFLKS 181
YD V+ +F KS
Sbjct: 183 YDQVMPFFEKS 193
Score = 52 (23.4 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 256 EPATEGFSKLQSTLSKGQRYSANRAYL 282
E + G+S + T+ +GQR S + YL
Sbjct: 240 EGSDTGYSHVPGTVRQGQRMSTGKGYL 266
>FB|FBgn0030592 [details] [associations]
symbol:CG9514 species:7227 "Drosophila melanogaster"
[GO:0008812 "choline dehydrogenase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR000172 InterPro:IPR007867 Pfam:PF00732 Pfam:PF05199
PROSITE:PS00623 PROSITE:PS00624 GO:GO:0050660 GO:GO:0016614
eggNOG:COG2303 EMBL:AY128482 ProteinModelPortal:Q8MQN2 SMR:Q8MQN2
STRING:Q8MQN2 PRIDE:Q8MQN2 FlyBase:FBgn0030592 InParanoid:Q8MQN2
OrthoDB:EOG4FQZ6Q ArrayExpress:Q8MQN2 Bgee:Q8MQN2 Uniprot:Q8MQN2
Length = 726
Score = 303 (111.7 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 64/168 (38%), Positives = 92/168 (54%)
Query: 55 YDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKL 114
YDF A+RLSE P WK+LLLE+G E +++PLL+ + + +W Y+
Sbjct: 95 YDFIIIGGGSAGTVLASRLSEIPHWKILLLEAGGHETEISDVPLLSLYLHKSKMDWKYRT 154
Query: 115 EKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSV 174
+ + C M + +C RGK LGGSS+LN M+Y RGNK+D+D + GN GW Y+ +
Sbjct: 155 QP--QPTACQAMKDKRCCWTRGKVLGGSSVLNTMLYIRGNKRDFDQWADFGNPGWSYEDI 212
Query: 175 LKYFLKSENNTSEFLDAD--IHSREGPLKVTNIPYQNLLTEKFTQAKE 220
L YF KSE+ + +L + H G V + PY + F QA E
Sbjct: 213 LPYFRKSEDQRNPYLARNKRYHGTGGLWTVQDAPYNTPIGPAFLQAGE 260
>UNIPROTKB|Q47YL1 [details] [associations]
symbol:CPS_3434 "Oxidoreductase, GMC family" species:167879
"Colwellia psychrerythraea 34H" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00624 GO:GO:0050660 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006066 eggNOG:COG2303
HOGENOM:HOG000139600 GO:GO:0008812 RefSeq:YP_270109.1
ProteinModelPortal:Q47YL1 STRING:Q47YL1 GeneID:3521773
KEGG:cps:CPS_3434 PATRIC:21469815 OMA:MELIFIS
BioCyc:CPSY167879:GI48-3463-MONOMER Uniprot:Q47YL1
Length = 539
Score = 278 (102.9 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 63/183 (34%), Positives = 101/183 (55%)
Query: 48 NKPILSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDEN-IYTNIP-LLAHFNSL 105
NK + +D+ ANRL+E+ K+ V LLE+G D N + P + F L
Sbjct: 2 NKSQDNNFDYIIVGAGSAGCVLANRLTEDGKFNVCLLEAGSDNNSMLVKTPGAFSAFMFL 61
Query: 106 THFNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAG 165
FNW + + ++ ++ PRG+GLGGSS N M+Y RG K+DYD + G
Sbjct: 62 KKFNWSFDAKPRKDIRNGEPLF-----VPRGRGLGGSSATNAMLYIRGQKQDYDHWAELG 116
Query: 166 NKGWGYDSVLKYFLKSENNTSEFLDADIHSREGPLKVTNIPYQNLLTEKFTQA-KEGPLK 224
N+GW +D +L YF KSE N+ ++++H GPL+VT+ P +++++ +A ++ K
Sbjct: 117 NEGWSFDDILPYFKKSETNSRG--ESELHGGAGPLQVTDRPAFYEISKRYIEASQQAGFK 174
Query: 225 VTN 227
VT+
Sbjct: 175 VTD 177
>TIGR_CMR|CPS_3434 [details] [associations]
symbol:CPS_3434 "oxidoreductase, GMC family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] [GO:0016491 "oxidoreductase
activity" evidence=ISS] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00624 GO:GO:0050660 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006066 eggNOG:COG2303
HOGENOM:HOG000139600 GO:GO:0008812 RefSeq:YP_270109.1
ProteinModelPortal:Q47YL1 STRING:Q47YL1 GeneID:3521773
KEGG:cps:CPS_3434 PATRIC:21469815 OMA:MELIFIS
BioCyc:CPSY167879:GI48-3463-MONOMER Uniprot:Q47YL1
Length = 539
Score = 278 (102.9 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 63/183 (34%), Positives = 101/183 (55%)
Query: 48 NKPILSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDEN-IYTNIP-LLAHFNSL 105
NK + +D+ ANRL+E+ K+ V LLE+G D N + P + F L
Sbjct: 2 NKSQDNNFDYIIVGAGSAGCVLANRLTEDGKFNVCLLEAGSDNNSMLVKTPGAFSAFMFL 61
Query: 106 THFNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAG 165
FNW + + ++ ++ PRG+GLGGSS N M+Y RG K+DYD + G
Sbjct: 62 KKFNWSFDAKPRKDIRNGEPLF-----VPRGRGLGGSSATNAMLYIRGQKQDYDHWAELG 116
Query: 166 NKGWGYDSVLKYFLKSENNTSEFLDADIHSREGPLKVTNIPYQNLLTEKFTQA-KEGPLK 224
N+GW +D +L YF KSE N+ ++++H GPL+VT+ P +++++ +A ++ K
Sbjct: 117 NEGWSFDDILPYFKKSETNSRG--ESELHGGAGPLQVTDRPAFYEISKRYIEASQQAGFK 174
Query: 225 VTN 227
VT+
Sbjct: 175 VTD 177
>FB|FBgn0030593 [details] [associations]
symbol:CG9512 species:7227 "Drosophila melanogaster"
[GO:0008812 "choline dehydrogenase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0006066
"alcohol metabolic process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00624 GO:GO:0050660 EMBL:AE014298
GO:GO:0006066 eggNOG:COG2303 GO:GO:0008812
GeneTree:ENSGT00530000063260 EMBL:AY058342 RefSeq:NP_572982.1
UniGene:Dm.4199 SMR:Q9VY05 EnsemblMetazoa:FBtr0073979 GeneID:32419
KEGG:dme:Dmel_CG9512 UCSC:CG9512-RA FlyBase:FBgn0030593
InParanoid:Q9VY05 OMA:RITTARS OrthoDB:EOG4BCC32 GenomeRNAi:32419
NextBio:778361 Uniprot:Q9VY05
Length = 623
Score = 279 (103.3 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 61/159 (38%), Positives = 83/159 (52%)
Query: 54 EYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYK 113
+YDF A RL+E WKVLLLE+G D I T + ++W Y
Sbjct: 57 DYDFIVIGSGTSGAVVAGRLAEVKNWKVLLLEAGGDPPIETEFVAWHMATQFSEWDWQYH 116
Query: 114 LEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDS 173
+ N C+ M + C PRGK LGG++ +N MIY RG +KD+D +E GN GWGYD
Sbjct: 117 SKPNGR--ACMAMKGESCHWPRGKMLGGTNGMNAMIYARGTRKDFDDWEERGNPGWGYDE 174
Query: 174 VLKYFLKSENNTS---EFLDADIHSREGPLKVTNIPYQN 209
VLK+F K+E+ S ++ D H GP+ + N N
Sbjct: 175 VLKHFRKAEDLRSTRPDYKPGD-HGVGGPMGLNNYVSDN 212
>TIGR_CMR|CPS_4010 [details] [associations]
symbol:CPS_4010 "choline dehydrogenase" species:167879
"Colwellia psychrerythraea 34H" [GO:0008812 "choline dehydrogenase
activity" evidence=ISS] [GO:0019285 "glycine betaine biosynthetic
process from choline" evidence=ISS] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR011533 InterPro:IPR012132
Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137 PROSITE:PS00623
PROSITE:PS00624 UniPathway:UPA00529 GO:GO:0050660 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0019285 eggNOG:COG2303
HOGENOM:HOG000139600 KO:K00108 ProtClustDB:PRK02106 GO:GO:0008812
TIGRFAMs:TIGR01810 OMA:SRDEYSY RefSeq:YP_270668.1
ProteinModelPortal:Q47X03 STRING:Q47X03 GeneID:3518730
KEGG:cps:CPS_4010 PATRIC:21470901
BioCyc:CPSY167879:GI48-4023-MONOMER Uniprot:Q47X03
Length = 561
Score = 215 (80.7 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 56/153 (36%), Positives = 80/153 (52%)
Query: 55 YDFXXXXXXXXXXXXANRLSENPKWKVLLLESG-EDENIYTNIP--LLAHFNSLTHFNWG 111
YD+ ANRLSE+ VLLLE+G D++I+ +P L NS + + W
Sbjct: 6 YDYIIVGAGSAGCVLANRLSEDGNSNVLLLETGGSDKSIFIQMPTALSIPMNS-SKYAWQ 64
Query: 112 YKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGY 171
++ E P+ + N + CPRGK LGGSS +N M+Y RG+ +D+D ++ G W Y
Sbjct: 65 FETE-----PEPF-IDNRRMHCPRGKVLGGSSSINGMVYVRGHARDFDEWQQYGADNWDY 118
Query: 172 DSVLKYFLKSENNTSEFLDADIHSREGPLKVTN 204
L YF K+E T F + +GPL V N
Sbjct: 119 AHCLPYFKKAE--TWAFGGDEYRGNDGPLGVNN 149
Score = 82 (33.9 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 24/69 (34%), Positives = 32/69 (46%)
Query: 217 QAKEGPLKVTN-IPYQNLLTEKFTQAACELGY-RIYDYTGIEPATEGFSKLQSTLSKGQR 274
+ +GPL V N N L + F A + GY DY G + EGF + T+ G R
Sbjct: 139 RGNDGPLGVNNGNKMANPLYKAFVNAGVDAGYFSTDDYNGSQQ--EGFGAMHMTVKDGVR 196
Query: 275 YSANRAYLK 283
S AYL+
Sbjct: 197 CSTANAYLR 205
>UNIPROTKB|Q488U4 [details] [associations]
symbol:CPS_0670 "Oxidoreductase, GMC family" species:167879
"Colwellia psychrerythraea 34H" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00624 GO:GO:0050660 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006066 eggNOG:COG2303
GO:GO:0008812 HOGENOM:HOG000139601 KO:K00119 RefSeq:YP_267420.1
ProteinModelPortal:Q488U4 STRING:Q488U4 GeneID:3522824
KEGG:cps:CPS_0670 PATRIC:21464665 OMA:RYNTEPE
BioCyc:CPSY167879:GI48-757-MONOMER Uniprot:Q488U4
Length = 534
Score = 257 (95.5 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 66/173 (38%), Positives = 89/173 (51%)
Query: 55 YDFXXXXXXXXXXXXANRLSENPKWKVLLLESG-EDENIYTNIPL-LAHFNSLTHFNWGY 112
Y++ A RL+ENP V LLE+G D++++ + P +A NW +
Sbjct: 2 YNYIIVGAGSAGCVLAARLTENPNITVCLLEAGGPDKSVFIHAPAGVAAMLPTKINNWAF 61
Query: 113 KLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYD 172
E PQ G+ + PRGK LGG S N M+Y RGNK DYD + A GNKGW Y+
Sbjct: 62 -----ETIPQ-KGLNGRKGYQPRGKTLGGCSSTNAMLYVRGNKWDYDNWSALGNKGWSYE 115
Query: 173 SVLKYFLKSENNTSEFLDADIHSREGPLKVTNIPYQNLLTEKF-TQAKEGPLK 224
VL YF KSE N E+ H+++GPL V+N + E F +E LK
Sbjct: 116 EVLPYFKKSEGN--EYFSDQYHNQDGPLGVSNATAASNTNEMFIASCQEQGLK 166
>TIGR_CMR|CPS_0670 [details] [associations]
symbol:CPS_0670 "oxidoreductase, GMC family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] [GO:0016491 "oxidoreductase
activity" evidence=ISS] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00624 GO:GO:0050660 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006066 eggNOG:COG2303
GO:GO:0008812 HOGENOM:HOG000139601 KO:K00119 RefSeq:YP_267420.1
ProteinModelPortal:Q488U4 STRING:Q488U4 GeneID:3522824
KEGG:cps:CPS_0670 PATRIC:21464665 OMA:RYNTEPE
BioCyc:CPSY167879:GI48-757-MONOMER Uniprot:Q488U4
Length = 534
Score = 257 (95.5 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 66/173 (38%), Positives = 89/173 (51%)
Query: 55 YDFXXXXXXXXXXXXANRLSENPKWKVLLLESG-EDENIYTNIPL-LAHFNSLTHFNWGY 112
Y++ A RL+ENP V LLE+G D++++ + P +A NW +
Sbjct: 2 YNYIIVGAGSAGCVLAARLTENPNITVCLLEAGGPDKSVFIHAPAGVAAMLPTKINNWAF 61
Query: 113 KLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYD 172
E PQ G+ + PRGK LGG S N M+Y RGNK DYD + A GNKGW Y+
Sbjct: 62 -----ETIPQ-KGLNGRKGYQPRGKTLGGCSSTNAMLYVRGNKWDYDNWSALGNKGWSYE 115
Query: 173 SVLKYFLKSENNTSEFLDADIHSREGPLKVTNIPYQNLLTEKF-TQAKEGPLK 224
VL YF KSE N E+ H+++GPL V+N + E F +E LK
Sbjct: 116 EVLPYFKKSEGN--EYFSDQYHNQDGPLGVSNATAASNTNEMFIASCQEQGLK 166
>TIGR_CMR|SPO_2359 [details] [associations]
symbol:SPO_2359 "oxidoreductase, GMC family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00623 PROSITE:PS00624 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0050660 GO:GO:0006066 KO:K00108
GO:GO:0008812 HOGENOM:HOG000139601 RefSeq:YP_167582.1
ProteinModelPortal:Q5LQX3 GeneID:3192668 KEGG:sil:SPO2359
PATRIC:23378087 OMA:EYGQTIF ProtClustDB:CLSK933848 Uniprot:Q5LQX3
Length = 535
Score = 240 (89.5 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 58/154 (37%), Positives = 89/154 (57%)
Query: 70 ANRLSENPKWKVLLLESG-EDENIYTNIPLLAHFNSLTH--FNWGYKLEKNEEHPQCLGM 126
ANRLS++P +V+LLE+G D N + ++P+ +F ++ + +W Y+ EK++ G+
Sbjct: 21 ANRLSKDPANRVVLLEAGPRDWNPWIHVPV-GYFKTMHNPSVDWCYRTEKDK------GL 73
Query: 127 YNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYFLKSENNTS 186
PRGK LGGSS LN ++Y RG +DYD + GN+GWG+D VL F +SEN
Sbjct: 74 NGRAIDWPRGKVLGGSSSLNGLLYVRGQPEDYDRWRQMGNEGWGWDDVLPLFKRSENQ-E 132
Query: 187 EFLDADIHSREGPLKVTNIPYQNLLTEKFTQAKE 220
DA H G L V+N+ Q + + + A +
Sbjct: 133 RGPDA-FHGTGGELSVSNMRLQRPICDAWVAAAQ 165
>TIGR_CMR|SPO_A0386 [details] [associations]
symbol:SPO_A0386 "oxidoreductase, GMC family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00623 PROSITE:PS00624 GO:GO:0050660 GO:GO:0006066
GO:GO:0008812 EMBL:CP000032 GenomeReviews:CP000032_GR
HOGENOM:HOG000139601 OMA:MYYSEPE RefSeq:YP_165213.1
ProteinModelPortal:Q5LKJ5 GeneID:3196551 KEGG:sil:SPOA0386
PATRIC:23382128 ProtClustDB:CLSK505666 Uniprot:Q5LKJ5
Length = 541
Score = 230 (86.0 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 67/190 (35%), Positives = 97/190 (51%)
Query: 52 LSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESG-EDENIYTNIPLLAHFNSL--THF 108
+S+YDF ANRLSE+ ++ VLLLE+G D N + +P+ + +
Sbjct: 1 MSDYDFIIVGAGSAGCVLANRLSESGRFTVLLLEAGGSDLNFWIWMPI-GYGKTFYKPSV 59
Query: 109 NWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKG 168
NW Y E + P G + PRGK LGGSS +N M+Y RG +D+D ++ GN G
Sbjct: 60 NWMYHTEPD---PALNGRVSYW---PRGKVLGGSSSINAMVYIRGQAQDFDEWQGLGNPG 113
Query: 169 WGYDSVLKYFLKSENNTSEFLDADIHSREGPLKVTNIPYQ-NLLTEKFTQAKEGPLKVTN 227
WG+D VL YF ++E N DA GPL V ++ + L + F A G L+ +
Sbjct: 114 WGWDDVLPYFRRAETNDRGG-DA-FRGDNGPLHVASMERDLHPLCQDFIAAG-GELQFPH 170
Query: 228 IPYQNLLTEK 237
P N T++
Sbjct: 171 NPDFNGATQE 180
>TIGR_CMR|SPO_1088 [details] [associations]
symbol:SPO_1088 "choline dehydrogenase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0008812 "choline dehydrogenase
activity" evidence=ISS] [GO:0019285 "glycine betaine biosynthetic
process from choline" evidence=ISS] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR011533 InterPro:IPR012132
Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137 PROSITE:PS00623
PROSITE:PS00624 UniPathway:UPA00529 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0050660 GO:GO:0019285
HOGENOM:HOG000139600 KO:K00108 ProtClustDB:PRK02106 GO:GO:0008812
TIGRFAMs:TIGR01810 OMA:FKRMEHS RefSeq:YP_166339.1
ProteinModelPortal:Q5LUG6 GeneID:3195720 KEGG:sil:SPO1088
PATRIC:23375477 Uniprot:Q5LUG6
Length = 552
Score = 227 (85.0 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 62/178 (34%), Positives = 89/178 (50%)
Query: 54 EYDFXXXXXXXXXXXXANRLSENPKWKVLLLE-SGEDENIYTNIPL-LAHFNSLTHFNWG 111
E DF A RLS VL++E G D + +P L++ +++ ++WG
Sbjct: 2 EADFVIVGAGSAGCAMAYRLS-GAGASVLVIEHGGTDAGPFIQMPAALSYPMNMSRYDWG 60
Query: 112 YKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGY 171
Y L + E H + N + CPRGK +GGSS +N M+Y RG+ D+DT+ G GW Y
Sbjct: 61 Y-LSEPEPH-----LNNRRLVCPRGKVIGGSSSINGMVYVRGHAMDFDTWSEMGADGWAY 114
Query: 172 DSVLKYFLKSE--NNTSEFLDADIHSREGPLKVTNIPYQNLLTEKFTQA-KEGPLKVT 226
VL YF + E ++ DA +GPL VT P N L + F A K+ +VT
Sbjct: 115 ADVLPYFKRMETWHDGGHGGDASWRGTDGPLHVTRGPRTNPLFKAFVDAGKQAGYEVT 172
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 220 EGPLKVTNIPYQNLLTEKFTQAACELGYRIY-DYTGIEPATEGFSKLQSTLSKGQRYSAN 278
+GPL VT P N L + F A + GY + DY G + EGF ++ T+ KG+R+SA
Sbjct: 142 DGPLHVTRGPRTNPLFKAFVDAGKQAGYEVTGDYNGEKQ--EGFGPMEQTVWKGRRWSAA 199
Query: 279 RAYLK 283
AYLK
Sbjct: 200 NAYLK 204
>TIGR_CMR|SPO_0971 [details] [associations]
symbol:SPO_0971 "oxidoreductase, GMC family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00624 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0050660 GO:GO:0006066 HOGENOM:HOG000139600 GO:GO:0008812
OMA:GSGYFEV RefSeq:YP_166223.1 ProteinModelPortal:Q5LUT2
GeneID:3195473 KEGG:sil:SPO0971 PATRIC:23375229
ProtClustDB:CLSK784779 Uniprot:Q5LUT2
Length = 534
Score = 221 (82.9 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 60/173 (34%), Positives = 85/173 (49%)
Query: 51 ILSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIY-TNIPL-LAHFNSLTHF 108
+ +YD+ ANRLS +PK +VLLLE+G + + +IP+ +
Sbjct: 5 LAGDYDYIIVGGGTAGCVLANRLSADPKTRVLLLEAGGKGHYHWVHIPVGYLYCIGNPRV 64
Query: 109 NWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKG 168
+W + K P G+ PRGK LGG + +N MIY RG DYD + GN G
Sbjct: 65 DW---MMKTAAEP---GLNGRSLVYPRGKVLGGCTSINGMIYMRGQAADYDGWRQMGNTG 118
Query: 169 WGYDSVLKYFLKSENNTSEFLDADIHSREGPLKVTNIPYQNLLTEKFTQAKEG 221
WG+D VL YF +SE++ ++D+H G KVT Q L E +EG
Sbjct: 119 WGWDDVLPYFRRSEDHHKG--ESDLHGAGGEWKVTT---QRLSWEILRAFQEG 166
>UNIPROTKB|E1C003 [details] [associations]
symbol:CHDH "Choline dehydrogenase" species:9031 "Gallus
gallus" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0008812 "choline dehydrogenase activity"
evidence=IEA] [GO:0019285 "glycine betaine biosynthetic process
from choline" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR011533 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00623 PROSITE:PS00624
UniPathway:UPA00529 GO:GO:0005743 GO:GO:0050660 GO:GO:0019285
GO:GO:0008812 TIGRFAMs:TIGR01810 GeneTree:ENSGT00530000063260
OMA:FAADYDE EMBL:AADN02013987 IPI:IPI00598379
Ensembl:ENSGALT00000008609 Uniprot:E1C003
Length = 595
Score = 191 (72.3 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 61/206 (29%), Positives = 98/206 (47%)
Query: 24 LLESVYQKYLRQQGLEFRENIFLGNKPILSEYDFXXXXXXXXXXXXANRLSENPKWKVLL 83
LL + ++ +++Q L+ + + + Y++ ANRL+E+P VLL
Sbjct: 13 LLRNTWR--IKEQQLKISRALSQLSSEKANSYNYVIVGAGSAGCVLANRLTEDPHSTVLL 70
Query: 84 LESGEDENIYTNIPLL--AHFNS-LTH------FNWGYKLEKNEEHPQCLGMYNDQCPCP 134
LE+G + + + LL H + LT+ +NW Y +++H MY P
Sbjct: 71 LEAGPKDTLLGSKRLLWKIHMPAALTYNLCDEKYNWYYHTT-SQKHMDNRIMY-----WP 124
Query: 135 RGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYFLKSENNTSEFLDADIH 194
RG+ GGSS LN M+Y RG+ +DY+ + G GW YD L YF K++ T E
Sbjct: 125 RGRVWGGSSSLNAMVYIRGHAEDYNRWSREGAIGWDYDHCLPYFKKAQ--THELGSDQYR 182
Query: 195 SREGPLKVTNIPYQNLLTEKFTQAKE 220
+GPL V+ + L + F A +
Sbjct: 183 GGKGPLYVSRGKTNHPLHQAFLDATQ 208
Score = 74 (31.1 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 220 EGPLKVTNIPYQNLLTEKFTQAACELGYRIYD-YTGIEPATEGFSKLQSTLSKGQRYSAN 278
+GPL V+ + L + F A + GY D G + EGF + T+ +G+R+S
Sbjct: 185 KGPLYVSRGKTNHPLHQAFLDATQQAGYPFTDDMNGYQQ--EGFGWMDMTIHQGKRWSTA 242
Query: 279 RAYL 282
AYL
Sbjct: 243 SAYL 246
>TIGR_CMR|SPO_0190 [details] [associations]
symbol:SPO_0190 "oxidoreductase, GMC family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00623 PROSITE:PS00624 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0050660 GO:GO:0006066 GO:GO:0008812
HOGENOM:HOG000139601 KO:K00119 OMA:QLHFVIS RefSeq:YP_165460.1
ProteinModelPortal:Q5LWY0 GeneID:3195583 KEGG:sil:SPO0190
PATRIC:23373627 ProtClustDB:CLSK688579 Uniprot:Q5LWY0
Length = 537
Score = 219 (82.2 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 59/169 (34%), Positives = 85/169 (50%)
Query: 55 YDFXXXXXXXXXXXXANRLSENPKWKVLLLESG-EDENIYTNIP--LLAHFNSLTHFN-W 110
+D+ A RLSE+P V L+E+G +++ P ++A N W
Sbjct: 3 FDYVIVGGGSAGSALAARLSEDPGRTVCLIEAGGRGDSLLIRAPAAVVAMLPGRPRINNW 62
Query: 111 GYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWG 170
Y E PQ G+ + PRGK LGGSS +N M+Y RG+++DYD + G GW
Sbjct: 63 AY-----ETVPQP-GLNGRRGYQPRGKALGGSSAINAMLYVRGHRRDYDEWAELGCDGWS 116
Query: 171 YDSVLKYFLKSENNTSEFLDAD-IHSREGPLKVTNIPYQNLLTEKFTQA 218
+D VL YF KSENN AD +H GPL+V++ ++ F +A
Sbjct: 117 WDEVLPYFRKSENNQR---GADPMHGGSGPLQVSDQQSPRPISRAFVEA 162
>UNIPROTKB|P17444 [details] [associations]
symbol:betA "choline dehydrogenase" species:83333
"Escherichia coli K-12" [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0019285 "glycine betaine biosynthetic process from choline"
evidence=IEA;IMP] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0008812 "choline dehydrogenase activity" evidence=IEA;IDA]
[GO:0006970 "response to osmotic stress" evidence=IEP;IMP]
HAMAP:MF_00750 InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR011533 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00623 PROSITE:PS00624
UniPathway:UPA00529 GO:GO:0005886 GO:GO:0016020 GO:GO:0050660
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006970 EMBL:U73857 GO:GO:0019285
EMBL:X52905 EMBL:M77738 PIR:S15182 RefSeq:NP_414845.1
RefSeq:YP_488606.1 ProteinModelPortal:P17444 SMR:P17444
IntAct:P17444 PRIDE:P17444 EnsemblBacteria:EBESCT00000002974
EnsemblBacteria:EBESCT00000015710 GeneID:12933806 GeneID:945716
KEGG:ecj:Y75_p0301 KEGG:eco:b0311 PATRIC:32115751 EchoBASE:EB0107
EcoGene:EG10109 eggNOG:COG2303 HOGENOM:HOG000139600 KO:K00108
OMA:AMDYDGW ProtClustDB:PRK02106 BioCyc:EcoCyc:CHD-MONOMER
BioCyc:ECOL316407:JW0303-MONOMER BioCyc:MetaCyc:CHD-MONOMER
Genevestigator:P17444 GO:GO:0008812 TIGRFAMs:TIGR01810
Uniprot:P17444
Length = 556
Score = 218 (81.8 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 59/171 (34%), Positives = 84/171 (49%)
Query: 54 EYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDE---NIYTNIPLLAHFNSL-THFN 109
++D+ A RL+E+P VLLLE+G + + T +P F +N
Sbjct: 2 QFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYN 61
Query: 110 WGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTY-EAAGNKG 168
W Y+ E P+ M N + C RGKGLGGSS++N M Y RGN D D + + G +
Sbjct: 62 WAYETE-----PEPF-MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 169 WGYDSVLKYFLKSENNTSEFLDADIHSREGPLKVTNI-PYQNLLTEKFTQA 218
W Y L Y+ K+E T + + D H +GP+ VT P N L E +A
Sbjct: 116 WSYLDCLPYYRKAE--TRDMGENDYHGGDGPVSVTTSKPGVNPLFEAMIEA 164
>TIGR_CMR|CPS_1334 [details] [associations]
symbol:CPS_1334 "choline dehydrogenase" species:167879
"Colwellia psychrerythraea 34H" [GO:0008812 "choline dehydrogenase
activity" evidence=ISS] [GO:0019285 "glycine betaine biosynthetic
process from choline" evidence=ISS] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR011533 InterPro:IPR012132
Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137 PROSITE:PS00623
PROSITE:PS00624 UniPathway:UPA00529 GO:GO:0050660 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0019285 eggNOG:COG2303
HOGENOM:HOG000139600 KO:K00108 ProtClustDB:PRK02106 GO:GO:0008812
TIGRFAMs:TIGR01810 OMA:SSIRWPG RefSeq:YP_268077.1
ProteinModelPortal:Q486D8 STRING:Q486D8 GeneID:3522100
KEGG:cps:CPS_1334 PATRIC:21465891
BioCyc:CPSY167879:GI48-1415-MONOMER Uniprot:Q486D8
Length = 560
Score = 212 (79.7 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 56/168 (33%), Positives = 85/168 (50%)
Query: 54 EYDFXXXXXXXXXXXXANRLSENPKWKVLLLESG-EDENIYTNIPLLAHFNSLTH-FNWG 111
++D+ ANRLSE+ +VLLLE+G D++I+ +P T + W
Sbjct: 5 KFDYIIVGAGSAGCVLANRLSEDSNNRVLLLETGGSDKSIFIQMPTALSIPMNTKKYAWQ 64
Query: 112 YKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGY 171
+ E P+ + + CPRGK LGGSS +N M+Y RG+ +D+D ++ +G + W Y
Sbjct: 65 F-----ETQPEPF-LDERRMHCPRGKVLGGSSSINGMVYVRGHARDFDEWQQSGAQNWDY 118
Query: 172 DSVLKYFLKSENNTSEFLDADIHSREGPLKVTN-IPYQNLLTEKFTQA 218
L YF K+E T F + + GPL V N +N L + F A
Sbjct: 119 AHCLPYFKKAE--TWAFDGNEYRGKSGPLGVNNGNEMKNPLYQAFVDA 164
>UNIPROTKB|P64263 [details] [associations]
symbol:MT1316 "Uncharacterized GMC-type oxidoreductase
Rv1279/MT1316" species:1773 "Mycobacterium tuberculosis"
[GO:0005618 "cell wall" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR000172 InterPro:IPR007867 InterPro:IPR012132
Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137 PROSITE:PS00623
PROSITE:PS00624 GO:GO:0005829 GO:GO:0005886 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0050660 EMBL:BX842576 GO:GO:0006066 eggNOG:COG2303
GO:GO:0008812 PIR:G70755 RefSeq:NP_215795.1 RefSeq:NP_335763.1
RefSeq:YP_006514654.1 ProteinModelPortal:P64263 SMR:P64263
PRIDE:P64263 EnsemblBacteria:EBMYCT00000002176
EnsemblBacteria:EBMYCT00000071181 GeneID:13319858 GeneID:887002
GeneID:923187 KEGG:mtc:MT1316 KEGG:mtu:Rv1279 KEGG:mtv:RVBD_1279
PATRIC:18124660 TubercuList:Rv1279 HOGENOM:HOG000139601 KO:K00119
OMA:FAADYDE ProtClustDB:CLSK791075 Uniprot:P64263
Length = 528
Score = 190 (71.9 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 52/156 (33%), Positives = 76/156 (48%)
Query: 53 SEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESG-EDENIYTNIPLLAHFNSL--THFN 109
++ D+ A+RLS +P V+ LE+G D+N + +P A F+ L + +
Sbjct: 3 TQSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVP--AAFSKLFRSEID 60
Query: 110 WGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGW 169
W Y E P+ G + PRGK LGGSS +N M++ RG DYD + A W
Sbjct: 61 WDYL---TEPQPELDGR---EIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRW 114
Query: 170 GYDSVLKYFLKSENNTS--EFLDADIHSREGPLKVT 203
Y VL YF + EN T+ F+ D GPL ++
Sbjct: 115 SYADVLGYFRRIENVTAAWHFVSGDDSGVTGPLHIS 150
Score = 65 (27.9 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 221 GPLKVTNIPYQNLLTEKFTQAACELGYRIYDYTGIEPATEGFSKLQSTLSKGQRYSANRA 280
GPL ++ +T + AA E G+ P EGF + T +G R+S A
Sbjct: 145 GPLHISRQRSPRSVTAAWLAAARECGFAAARPNS--PRPEGFCETVVTQRRGARFSTADA 202
Query: 281 YLK 283
YLK
Sbjct: 203 YLK 205
>UNIPROTKB|E2R4L5 [details] [associations]
symbol:CHDH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0008812 "choline dehydrogenase activity"
evidence=IEA] [GO:0006066 "alcohol metabolic process" evidence=IEA]
InterPro:IPR000172 InterPro:IPR007867 InterPro:IPR012132
Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137 PROSITE:PS00623
PROSITE:PS00624 GO:GO:0050660 GO:GO:0006066 KO:K00108 GO:GO:0008812
CTD:55349 GeneTree:ENSGT00530000063260 EMBL:AAEX03012183
RefSeq:XP_541839.3 Ensembl:ENSCAFT00000013235 GeneID:484723
KEGG:cfa:484723 OMA:QSPHILQ Uniprot:E2R4L5
Length = 703
Score = 171 (65.3 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 52/167 (31%), Positives = 76/167 (45%)
Query: 47 GNKPILSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDE----------NIYTNI 96
G P EY A RL+E+P ++LLLE+G + I+
Sbjct: 142 GPGPGPGEYSHVVVGAGSAGCVLAARLTEDPAVRLLLLEAGPRDLLAGSKRLLWKIHMPA 201
Query: 97 PLLAHFNSLTHFNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKK 156
L+A+ +NW Y E PQ G+ PRG+ GGSS LN M+Y RG+ +
Sbjct: 202 ALVANLRD-DRYNWCYHTE-----PQA-GLGGRVLYWPRGRVWGGSSSLNAMVYVRGHAE 254
Query: 157 DYDTYEAAGNKGWGYDSVLKYFLKSENNTSEFLDADIHSREGPLKVT 203
DY+ ++ G GWGY L YF +++++ E GPL V+
Sbjct: 255 DYERWQREGAAGWGYARCLPYFRRAQSH--ELGAGPYRGGRGPLHVS 299
Score = 76 (31.8 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 221 GPLKVTNIPYQNLLTEKFTQAACELGYRIYD-YTGIEPATEGFSKLQSTLSKGQRYSANR 279
GPL V+ + L F AA + GY + D G + EGF + T+ +G+R+S
Sbjct: 294 GPLHVSRGRTDHPLHRAFLDAARQAGYPLTDDMNGFQQ--EGFGWMDRTIHQGKRWSTAC 351
Query: 280 AYL 282
AYL
Sbjct: 352 AYL 354
>WB|WBGene00007917 [details] [associations]
symbol:C34C6.4 species:6239 "Caenorhabditis elegans"
[GO:0016614 "oxidoreductase activity, acting on CH-OH group of
donors" evidence=IEA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0006066 "alcohol metabolic process" evidence=IEA]
[GO:0008812 "choline dehydrogenase activity" evidence=IEA]
[GO:0000003 "reproduction" evidence=IMP] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00623 PROSITE:PS00624 GO:GO:0050660
GO:GO:0000003 GO:GO:0006066 eggNOG:COG2303 HOGENOM:HOG000139600
KO:K00108 GO:GO:0008812 GeneTree:ENSGT00530000063260 EMBL:Z66494
PIR:T19711 RefSeq:NP_495846.1 ProteinModelPortal:Q18429 SMR:Q18429
STRING:Q18429 PaxDb:Q18429 EnsemblMetazoa:C34C6.4 GeneID:174390
KEGG:cel:CELE_C34C6.4 UCSC:C34C6.4 CTD:174390 WormBase:C34C6.4
InParanoid:Q18429 OMA:VIMMAER NextBio:883826 Uniprot:Q18429
Length = 599
Score = 193 (73.0 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 57/164 (34%), Positives = 82/164 (50%)
Query: 70 ANRLSENPKWKVLLLESGEDENIYT---NIPLLAHFNSLTH-FNWGYKLEKNEEHPQCLG 125
ANRL+E+P +VLL+E+G ++ + ++P +N + +NW Y + LG
Sbjct: 53 ANRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAALMYNLCSDTYNWHYHTTAQKN----LG 108
Query: 126 MYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYFLKSENNT 185
N PRG+ GGSS LN M Y RG+ DY+ +E G GW Y + L YF K+E +
Sbjct: 109 --NRVFYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKEGASGWNYANCLPYFKKAETYS 166
Query: 186 SEFLDADIH-SREGPLKVTNIPYQNLLTEKFTQA-KEGPLKVTN 227
D + GPL V +N L + + KE PL TN
Sbjct: 167 DATGPNDPYRGNNGPLYVKKGDAENPLHKAWLNVGKEHPLGWTN 210
>TIGR_CMR|SPO_A0283 [details] [associations]
symbol:SPO_A0283 "oxidoreductase, GMC family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00623 PROSITE:PS00624 GO:GO:0050660 GO:GO:0006066
HOGENOM:HOG000139600 GO:GO:0008812 EMBL:CP000032
GenomeReviews:CP000032_GR RefSeq:YP_165112.1
ProteinModelPortal:Q5LKU6 GeneID:3196740 KEGG:sil:SPOA0283
PATRIC:23381910 OMA:KSENANG Uniprot:Q5LKU6
Length = 534
Score = 155 (59.6 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 44/157 (28%), Positives = 68/157 (43%)
Query: 52 LSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESG-EDENIYTNIPL-LAHFNSLTHFN 109
+ +DF A RLS + + VLL+E+G D + +PL N
Sbjct: 1 MDRFDFIIVGAGSAGCVLAERLSASGRHTVLLIEAGGSDRRFWVKVPLGYGKTYDDPSVN 60
Query: 110 WGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGW 169
W Y + + P G+ PRG+ LGGSS +N M Y +G D+D +E AG GW
Sbjct: 61 WCYTAQSD---P---GLAGRAAFWPRGRVLGGSSSINAMAYVQGLPHDFDDWETAGATGW 114
Query: 170 GYDSVLKYFLKSENNTSEFLDADIH-SREGPLKVTNI 205
+ + + + E D S GP+ V+++
Sbjct: 115 NWQAARDTYARIETRDRPGTDGRRQLSGSGPVHVSDV 151
Score = 83 (34.3 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 221 GPLKVTNI-PYQNLLTEKFTQAACELGYRIYDYTGIEPATEGFSKLQSTLSKGQRYSANR 279
GP+ V+++ + +E F AA + G+ + D P G ++LQ T+ G+R+SA
Sbjct: 144 GPVHVSDVGDRMHPFSEHFLSAAAQAGWPLLDDLN-GPERTGIARLQGTVRNGRRWSAAD 202
Query: 280 AYLK 283
A+L+
Sbjct: 203 AFLR 206
>RGD|735166 [details] [associations]
symbol:Chdh "choline dehydrogenase" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=ISO;IDA] [GO:0008812
"choline dehydrogenase activity" evidence=IMP] [GO:0016614
"oxidoreductase activity, acting on CH-OH group of donors"
evidence=IEA] [GO:0019285 "glycine betaine biosynthetic process
from choline" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00623 PROSITE:PS00624
UniPathway:UPA00529 RGD:735166 GO:GO:0005743 GO:GO:0050660
GO:GO:0019285 EMBL:CH474046 HOGENOM:HOG000139600 KO:K00108
GO:GO:0008812 CTD:55349 HOVERGEN:HBG023639 OMA:SRDEYSY
GeneTree:ENSGT00530000063260 EMBL:AY365023 EMBL:BC085787
IPI:IPI00358005 RefSeq:NP_942026.1 UniGene:Rn.22857
ProteinModelPortal:Q6UPE0 STRING:Q6UPE0 PRIDE:Q6UPE0
Ensembl:ENSRNOT00000021407 GeneID:290551 KEGG:rno:290551
UCSC:RGD:735166 InParanoid:Q6UPE0 BRENDA:1.1.99.1 NextBio:631184
ArrayExpress:Q6UPE0 Genevestigator:Q6UPE0 Uniprot:Q6UPE0
Length = 599
Score = 185 (70.2 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 57/176 (32%), Positives = 84/176 (47%)
Query: 54 EYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDE----------NIYTNIPLLAHFN 103
EY F ANRL+E+P +VLLLE+G + I+ L+A+
Sbjct: 45 EYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLC 104
Query: 104 SLTHFNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEA 163
+NW Y E P G+ PRG+ GGSS LN M+Y RG+ +DY+ +
Sbjct: 105 D-DKYNWYYH---TEAQP---GLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHR 157
Query: 164 AGNKGWGYDSVLKYFLKSENNTSEFLDADIH-SREGPLKVTNIPYQNLLTEKFTQA 218
G +GW Y L YF K++ + L A+++ +GPL V+ + L + F QA
Sbjct: 158 QGAEGWDYAHCLPYFRKAQKHE---LGANMYRGGDGPLHVSRGKTNHPLHQAFLQA 210
>MGI|MGI:1860776 [details] [associations]
symbol:Chdh "choline dehydrogenase" species:10090 "Mus
musculus" [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO;IDA] [GO:0006066
"alcohol metabolic process" evidence=IEA] [GO:0008812 "choline
dehydrogenase activity" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016614 "oxidoreductase activity, acting on CH-OH group of
donors" evidence=IEA] [GO:0019285 "glycine betaine biosynthetic
process from choline" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR011533 InterPro:IPR012132
Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137 PROSITE:PS00623
PROSITE:PS00624 UniPathway:UPA00529 MGI:MGI:1860776 GO:GO:0005743
GO:GO:0050660 GO:GO:0019285 eggNOG:COG2303 HOGENOM:HOG000139600
KO:K00108 GO:GO:0008812 TIGRFAMs:TIGR01810 CTD:55349
HOVERGEN:HBG023639 OrthoDB:EOG4PK27G EMBL:AK030900 EMBL:AK164042
EMBL:BC039186 IPI:IPI00273146 RefSeq:NP_001129712.1
RefSeq:NP_758468.2 RefSeq:NP_780552.1 UniGene:Mm.259916
ProteinModelPortal:Q8BJ64 SMR:Q8BJ64 STRING:Q8BJ64
PhosphoSite:Q8BJ64 PaxDb:Q8BJ64 PRIDE:Q8BJ64
Ensembl:ENSMUST00000067620 Ensembl:ENSMUST00000118917 GeneID:218865
KEGG:mmu:218865 UCSC:uc007sup.2 GeneTree:ENSGT00530000063260
InParanoid:Q8BJ64 OMA:NNRVLYW NextBio:376465 Bgee:Q8BJ64
CleanEx:MM_CHDH Genevestigator:Q8BJ64 GermOnline:ENSMUSG00000015970
Uniprot:Q8BJ64
Length = 596
Score = 184 (69.8 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 59/175 (33%), Positives = 89/175 (50%)
Query: 54 EYDFXXXXXXXXXXXXANRLSENPKWKVLLLESG-ED-----ENIYTNIPLLAHF-NSLT 106
EY F A+RL+E+P +VLLLE+G +D + + I + A ++L
Sbjct: 42 EYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVSNLC 101
Query: 107 H--FNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAA 164
+NW Y E PQ GM + PRG+ GGSS LN M+Y RG+ +DY+ +
Sbjct: 102 DDKYNWYYHTE-----PQP-GMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRE 155
Query: 165 GNKGWGYDSVLKYFLKSENNTSEFLDADIH-SREGPLKVTNIPYQNLLTEKFTQA 218
G +GW Y L YF K++ + L A+++ +GPL V+ + L + F QA
Sbjct: 156 GAEGWDYAHCLPYFRKAQRHE---LGANMYRGGDGPLHVSRGKTNHPLHQAFLQA 207
>UNIPROTKB|Q8NE62 [details] [associations]
symbol:CHDH "Choline dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0008812 "choline
dehydrogenase activity" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0019285 "glycine betaine
biosynthetic process from choline" evidence=IEA] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00623 PROSITE:PS00624
UniPathway:UPA00529 GO:GO:0005743 GO:GO:0050660 DrugBank:DB00122
GO:GO:0019285 EMBL:AC012467 eggNOG:COG2303 HOGENOM:HOG000139600
KO:K00108 GO:GO:0008812 EMBL:BC034502 EMBL:AJ272267 IPI:IPI00168603
RefSeq:NP_060867.2 UniGene:Hs.126688 UniGene:Hs.729536
ProteinModelPortal:Q8NE62 SMR:Q8NE62 STRING:Q8NE62
PhosphoSite:Q8NE62 DMDM:229462828 PaxDb:Q8NE62 PRIDE:Q8NE62
DNASU:55349 Ensembl:ENST00000315251 GeneID:55349 KEGG:hsa:55349
UCSC:uc003dgz.3 CTD:55349 GeneCards:GC03M053826 HGNC:HGNC:24288
HPA:HPA036633 neXtProt:NX_Q8NE62 PharmGKB:PA134873121
HOVERGEN:HBG023639 InParanoid:Q8NE62 OMA:SRDEYSY OrthoDB:EOG4PK27G
PhylomeDB:Q8NE62 ChiTaRS:CHDH GenomeRNAi:55349 NextBio:59691
ArrayExpress:Q8NE62 Bgee:Q8NE62 CleanEx:HS_CHDH
Genevestigator:Q8NE62 GermOnline:ENSG00000016391 Uniprot:Q8NE62
Length = 594
Score = 180 (68.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 60/199 (30%), Positives = 88/199 (44%)
Query: 34 RQQGLEFRENIFLGNKPILSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDE--- 90
+QQ L R G++ EY + A RL+E+P +VLLLE+G +
Sbjct: 21 QQQSLGARALASAGSES-RDEYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLA 79
Query: 91 -------NIYTNIPLLAHFNSLTHFNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSS 143
I+ L+A+ +NW Y E G+ PRG+ GGSS
Sbjct: 80 GSKRLSWKIHMPAALVANLCD-DRYNWCYHTEVQR------GLDGRVLYWPRGRVWGGSS 132
Query: 144 ILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYFLKSENNTSEFLDADIHSREGPLKV- 202
LN M+Y RG+ +DY+ ++ G +GW Y L YF K++ + E + +GPL+V
Sbjct: 133 SLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQGH--ELGASRYRGADGPLRVS 190
Query: 203 ---TNIPYQNLLTEKFTQA 218
TN P E QA
Sbjct: 191 RGKTNHPLHCAFLEATQQA 209
>UNIPROTKB|F1SH89 [details] [associations]
symbol:CHDH "Choline dehydrogenase" species:9823 "Sus
scrofa" [GO:0019285 "glycine betaine biosynthetic process from
choline" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0008812 "choline dehydrogenase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR011533 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00623 UniPathway:UPA00529 GO:GO:0005743
GO:GO:0050660 GO:GO:0019285 KO:K00108 GO:GO:0008812
TIGRFAMs:TIGR01810 CTD:55349 OMA:SRDEYSY
GeneTree:ENSGT00530000063260 EMBL:CU466421 RefSeq:XP_001925979.2
UniGene:Ssc.49492 Ensembl:ENSSSCT00000012537 GeneID:100151982
KEGG:ssc:100151982 Uniprot:F1SH89
Length = 594
Score = 177 (67.4 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 57/177 (32%), Positives = 83/177 (46%)
Query: 54 EYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLA---HF-----NSL 105
EY ANRL+E+P +VLLLE+G +++Y L H ++L
Sbjct: 40 EYSHVVVGAGSAGCVLANRLTEDPDERVLLLEAGP-KDLYAGSKRLLWKIHMPAALVDNL 98
Query: 106 T--HFNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEA 163
+NW Y E PQ G+ + PRG+ GGSS LN M+Y RG+ +DY+ ++
Sbjct: 99 CDDRYNWCYHTE-----PQP-GLDSRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQR 152
Query: 164 AGNKGWGYDSVLKYFLKSENNTSEFLDADIHSREGPLKVTNIPYQNLLTEKFTQAKE 220
G GW Y L YF K++ T E +GPL V+ + L F +A +
Sbjct: 153 EGAAGWDYAHCLPYFRKAQ--THELGAGRYRGGDGPLHVSRGKSGHPLHHAFLEAAQ 207
>ASPGD|ASPL0000014551 [details] [associations]
symbol:AN3531 species:162425 "Emericella nidulans"
[GO:0047833 "D-sorbitol dehydrogenase (acceptor) activity"
evidence=RCA] [GO:0006060 "sorbitol metabolic process"
evidence=RCA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000172 InterPro:IPR007867 InterPro:IPR012132
Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137 PROSITE:PS00623
PROSITE:PS00624 GO:GO:0050660 EMBL:BN001302 GO:GO:0006066
eggNOG:COG2303 GO:GO:0008812 HOGENOM:HOG000139601 OrthoDB:EOG49CTH5
EMBL:AACD01000060 RefSeq:XP_661135.1 EnsemblFungi:CADANIAT00005220
GeneID:2872949 KEGG:ani:AN3531.2 Uniprot:Q5B7E9
Length = 555
Score = 169 (64.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 49/154 (31%), Positives = 73/154 (47%)
Query: 55 YDFXXXXXXXXXXXXANRLSE-NPKWKVLLLESGEDE--NIYTNIPLL---AHFNSLTHF 108
YD+ A RL+E N ++L++E+G + + T PL AHF+ L
Sbjct: 6 YDYIIIGGGLAGCTLAGRLAEKNRSLQILIIEAGPNVAGHTLTEYPLACFGAHFSPL--- 62
Query: 109 NWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEA-AGNK 167
+W Y PQ + N C K LGG S +NY +TRGN DYD + A ++
Sbjct: 63 DWAYTTV-----PQT-HLDNRMCYNSAAKALGGGSAINYGTWTRGNAADYDRWAAMVDDE 116
Query: 168 GWGYDSVLKYFLKSENNTS-EFLDADIHSREGPL 200
WGY+++L YF + EN + + H GP+
Sbjct: 117 SWGYEALLPYFKRMENCLDCKGTETGAHGVSGPI 150
>UNIPROTKB|E1BES2 [details] [associations]
symbol:CHDH "Choline dehydrogenase" species:9913 "Bos
taurus" [GO:0019285 "glycine betaine biosynthetic process from
choline" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0008812 "choline dehydrogenase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR011533 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00623 PROSITE:PS00624
UniPathway:UPA00529 GO:GO:0005743 GO:GO:0050660 GO:GO:0019285
KO:K00108 GO:GO:0008812 TIGRFAMs:TIGR01810 CTD:55349
GeneTree:ENSGT00530000063260 EMBL:DAAA02054355 IPI:IPI00707906
RefSeq:NP_001192493.1 UniGene:Bt.18996 PRIDE:E1BES2
Ensembl:ENSBTAT00000013227 GeneID:505218 KEGG:bta:505218
OMA:FKRMEHS NextBio:20867036 Uniprot:E1BES2
Length = 594
Score = 168 (64.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 53/162 (32%), Positives = 82/162 (50%)
Query: 70 ANRLSENPKWKVLLLESGEDENIYT---------NIP--LLAHFNSLTHFNWGYKLEKNE 118
A RL+E+P VLLLE+G +++Y ++P L+A+ T +NW Y E
Sbjct: 56 AGRLTEDPDQHVLLLEAGP-KDVYAGSKRLCWKIHMPAALVANLCDDT-YNWCYHTE--- 110
Query: 119 EHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYF 178
PQ G+ PRG+ GGSS LN M+Y RG+ +DY+ ++ G GW Y L YF
Sbjct: 111 --PQA-GLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGAAGWDYAHCLPYF 167
Query: 179 LKSENNTSEFLDADIHSREGPLKVTNIPYQNLLTEKFTQAKE 220
+++ + E +GPL+V+ + L F +A +
Sbjct: 168 RRAQAH--ELGAGRYRGGDGPLRVSRGKSGHPLHRAFLEAAQ 207
>ASPGD|ASPL0000037024 [details] [associations]
symbol:AN3229 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016614
"oxidoreductase activity, acting on CH-OH group of donors"
evidence=IEA] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00624 GO:GO:0050660 EMBL:BN001306 GO:GO:0006066
EMBL:AACD01000054 eggNOG:COG2303 GO:GO:0008812 HOGENOM:HOG000139601
OrthoDB:EOG44J5SB RefSeq:XP_660833.1 ProteinModelPortal:Q5B8A1
EnsemblFungi:CADANIAT00009833 GeneID:2874279 KEGG:ani:AN3229.2
Uniprot:Q5B8A1
Length = 611
Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 49/138 (35%), Positives = 69/138 (50%)
Query: 55 YDFXXXXXXXXXXXXANRLSENPKWKVLLLESGE----DENIYTNIP-LLAHFNSLTHFN 109
YD+ A RL+E+P V ++E+G D + + IP L A N T
Sbjct: 41 YDYVIVGGGTSGLAIAARLAEDPSLSVAVIEAGGYYELDGTVASIIPGLAAGANVGTDAT 100
Query: 110 WGYKLEKNEEHPQCLGMYNDQC-PCPRGKGLGGSSILNYMIYTRGNKKDYDTY-EAAGNK 167
++ N + Q L ND+ RGK LGGSS +YM+Y RG + YD + E G++
Sbjct: 101 EYSTVDWNFQ-AQPLTSANDRSLRYNRGKTLGGSSARHYMVYQRGTRGSYDQWAELTGDE 159
Query: 168 GWGYDSVLKYFLKSENNT 185
WG+DSV YF +S N T
Sbjct: 160 SWGWDSVFPYFQRSVNVT 177
>ASPGD|ASPL0000067640 [details] [associations]
symbol:AN7267 species:162425 "Emericella nidulans"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016614
"oxidoreductase activity, acting on CH-OH group of donors"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000172 InterPro:IPR007867 InterPro:IPR012132
Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137 PROSITE:PS00623
PROSITE:PS00624 GO:GO:0050660 EMBL:BN001304 GO:GO:0006066
eggNOG:COG2303 GO:GO:0008812 HOGENOM:HOG000139601 EMBL:AACD01000125
RefSeq:XP_680536.1 EnsemblFungi:CADANIAT00000175 GeneID:2869959
KEGG:ani:AN7267.2 OrthoDB:EOG49CTH5 Uniprot:Q5AWR3
Length = 549
Score = 160 (61.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 48/157 (30%), Positives = 72/157 (45%)
Query: 52 LSEYDFXXXXXXXXXXXXANRLSEN-PKWKVLLLESGEDE----NIYTNIPLLAHFNSLT 106
+ E+D+ A+RL ++ P VLLLE+G D N+ T PL + S
Sbjct: 3 IPEFDYIIVGGGLTGCVVASRLKQHDPSLNVLLLEAGVDPSNNPNVKTYPPLFSLLGS-- 60
Query: 107 HFNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTY-EAAG 165
+W Y PQ N GK LGG + +N+ ++RG+ DYD +
Sbjct: 61 DIDWKYSTT-----PQP-NTGNRIHSVHAGKALGGGTTINFGGWSRGDSADYDLWARTVR 114
Query: 166 NKGWGYDSVLKYFLKSENNTSEFLDADIHSREGPLKV 202
++ WGY +L YF +SE+ D H EGP++V
Sbjct: 115 DQRWGYQGLLPYFRRSESFFDRTADVQEHGFEGPVRV 151
>UNIPROTKB|G4N2I1 [details] [associations]
symbol:MGG_07580 "Glucose oxidase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00623 PROSITE:PS00624 EMBL:CM001233 GO:GO:0050660
GO:GO:0006066 GO:GO:0008812 RefSeq:XP_003711497.1
EnsemblFungi:MGG_07580T0 GeneID:2683500 KEGG:mgr:MGG_07580
Uniprot:G4N2I1
Length = 586
Score = 160 (61.4 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 43/140 (30%), Positives = 65/140 (46%)
Query: 52 LSE-YDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSL--THF 108
L+E +D+ ANRLSEN V ++E G DE + + F T
Sbjct: 17 LAETFDYVVVGAGTAGLVIANRLSENSAVTVAVIEPGGDERENPQVKSASSFLQAFNTRV 76
Query: 109 NWGYKLEKN---EEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAG 165
+W Y+ PQ Y+ +GKG+GG+SI+N M Y R K + D E G
Sbjct: 77 DWNYRTVNQPFVNNRPQ---QYH------QGKGIGGTSIINGMNYIRAEKAEIDALEKLG 127
Query: 166 NKGWGYDSVLKYFLKSENNT 185
N GW ++++ Y+ ++E T
Sbjct: 128 NPGWNWNTLFPYYKRNERFT 147
>ASPGD|ASPL0000014523 [details] [associations]
symbol:xptC species:162425 "Emericella nidulans"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016614
"oxidoreductase activity, acting on CH-OH group of donors"
evidence=IEA] [GO:1900793 "shamixanthone biosynthetic process"
evidence=IMP] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000172 InterPro:IPR007867 InterPro:IPR012132
Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137 PROSITE:PS00624
GO:GO:0050660 EMBL:BN001302 GO:GO:0006066 eggNOG:COG2303 KO:K00108
GO:GO:0008812 HOGENOM:HOG000139601 OrthoDB:EOG4JT3DV
EMBL:AACD01000137 RefSeq:XP_681267.1 STRING:Q5AUN2
EnsemblFungi:CADANIAT00004018 GeneID:2869062 KEGG:ani:AN7998.2
OMA:HEGNITW Uniprot:Q5AUN2
Length = 622
Score = 159 (61.0 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 43/134 (32%), Positives = 66/134 (49%)
Query: 53 SEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNW-G 111
S+YDF A+RL+E P VL++E+G + + + + + W G
Sbjct: 36 SKYDFIVVGGGVSGLTVADRLTEIPDVSVLVIEAGPVDRGEDFVYVPGSYERDPYI-WPG 94
Query: 112 YKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGY 171
E + E + N + GG SI+N MI+ RG D+D +E+ GN GWG+
Sbjct: 95 LTNEPSAE------LNNRVFDSVVARVAGGGSIVNAMIFLRGTALDFDGWESLGNHGWGW 148
Query: 172 DSVLKYFLKSENNT 185
+ +L YF+KSEN T
Sbjct: 149 EGMLPYFIKSENFT 162
>ASPGD|ASPL0000032264 [details] [associations]
symbol:AN8329 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016614
"oxidoreductase activity, acting on CH-OH group of donors"
evidence=IEA] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
GO:GO:0050660 EMBL:BN001305 GO:GO:0006066 eggNOG:COG2303
GO:GO:0008812 EMBL:AACD01000150 HOGENOM:HOG000139601
OrthoDB:EOG4897VN RefSeq:XP_681598.1 EnsemblFungi:CADANIAT00002793
GeneID:2868747 KEGG:ani:AN8329.2 Uniprot:Q5ATQ1
Length = 631
Score = 154 (59.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 46/134 (34%), Positives = 69/134 (51%)
Query: 55 YDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDE--NIYTNIPLLAHFNSLTHFNWGY 112
+DF ANRL E+ K +VL++E+G + + +IP LA + T+F+ +
Sbjct: 18 FDFVVGGGGTAGLVVANRLFEDSKVRVLVIEAGSNSVRDPRISIPGLA---ASTYFDPDF 74
Query: 113 KLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYD 172
PQ G+ Q PRG+ LGGSS +N + +KK D++E GN GW +
Sbjct: 75 DWCITSP-PQD-GLNGRQIAEPRGRTLGGSSAINLGMVIYPSKKGVDSWEELGNPGWNWA 132
Query: 173 SVLKYFLKSENNTS 186
S+ +Y KSE TS
Sbjct: 133 SLSEYLRKSETFTS 146
>FB|FBgn0037896 [details] [associations]
symbol:ninaG "ninaG" species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006066 "alcohol
metabolic process" evidence=IEA] [GO:0008812 "choline dehydrogenase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0046154 "rhodopsin metabolic process"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0001523 "retinoid metabolic process" evidence=IMP] [GO:0006810
"transport" evidence=IMP] [GO:0016491 "oxidoreductase activity"
evidence=IMP] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00623 PROSITE:PS00624 EMBL:AE014297 GO:GO:0005576
GO:GO:0050660 GO:GO:0006810 GO:GO:0007601 GO:GO:0016491
GO:GO:0050896 GO:GO:0006066 GO:GO:0001523 GO:GO:0046154
eggNOG:COG2303 GO:GO:0008812 GeneTree:ENSGT00530000063260
EMBL:AY118818 RefSeq:NP_001247047.1 RefSeq:NP_650070.1
UniGene:Dm.13684 ProteinModelPortal:Q9VGP2 SMR:Q9VGP2 STRING:Q9VGP2
EnsemblMetazoa:FBtr0301146 GeneID:41369 KEGG:dme:Dmel_CG6728
UCSC:CG6728-RA CTD:41369 FlyBase:FBgn0037896 InParanoid:Q9VGP2
OrthoDB:EOG4TTF04 BioCyc:MetaCyc:MONOMER-17371 GenomeRNAi:41369
NextBio:823513 Bgee:Q9VGP2 GermOnline:CG6728 Uniprot:Q9VGP2
Length = 581
Score = 152 (58.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 37/137 (27%), Positives = 65/137 (47%)
Query: 55 YDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKL 114
+D+ + L++N VLL+E+G + + IPLL F +W + L
Sbjct: 47 FDYVIVGGGTGGSTLTSLLAKNSNGSVLLIEAGGQFGLLSRIPLLTTFQQKGINDWSF-L 105
Query: 115 EKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGN-KGWGYDS 173
++H + QC PRGKGLGGS+ LNYM++ G+ D+D++ N W +
Sbjct: 106 SVPQKHSSRGLIERRQC-LPRGKGLGGSANLNYMLHFDGHGPDFDSWRDHHNLSDWSWAQ 164
Query: 174 VLKYFLKSENNTSEFLD 190
+ + ++ + L+
Sbjct: 165 MRSFMAAAKPKNPDMLE 181
>ASPGD|ASPL0000034263 [details] [associations]
symbol:AN2704 species:162425 "Emericella nidulans"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016614
"oxidoreductase activity, acting on CH-OH group of donors"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000172 InterPro:IPR007867 InterPro:IPR012132
Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137 PROSITE:PS00624
GO:GO:0050660 EMBL:BN001306 GO:GO:0006066 eggNOG:COG2303
GO:GO:0008812 EMBL:AACD01000047 RefSeq:XP_660308.1
EnsemblFungi:CADANIAT00010411 GeneID:2874521 KEGG:ani:AN2704.2
OrthoDB:EOG48PQV9 Uniprot:Q5B9S6
Length = 674
Score = 150 (57.9 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 53/157 (33%), Positives = 78/157 (49%)
Query: 70 ANRLSENPKWKVLLLESG----EDENIYTNIPLLAHFNSLTHFNWGYKLEKNEEHPQCLG 125
A RLSE+P+ V LLE+G D NIYT P A T ++W Y ++ P+ G
Sbjct: 42 AARLSEDPRATVTLLEAGPDGGNDPNIYT--PGFAGRLQNTQYSWNYT---SQPDPR-RG 95
Query: 126 MYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTY-EAAGNKGWGYDSVLKYF-LKSEN 183
N P+G LGG + +N+M Y+RG YD + E +G G +D +++ F L S
Sbjct: 96 --NIPVRFPQGHALGGGTSINFMSYSRGAASVYDQWAEESGIDGLRFDKIIQQFRLSSSL 153
Query: 184 NTSEFLDADIHSRE-----GPLKVTNIPYQNLLTEKF 215
++ +I + GPLKV+ +N TE F
Sbjct: 154 TIPSDIEYEIAANSTVYENGPLKVS-YERRNTGTEPF 189
>UNIPROTKB|G4N440 [details] [associations]
symbol:MGG_16853 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00624 EMBL:CM001233 GO:GO:0050660 GO:GO:0006066
GO:GO:0008812 RefSeq:XP_003712567.1 ProteinModelPortal:G4N440
EnsemblFungi:MGG_16853T0 GeneID:12985100 KEGG:mgr:MGG_16853
Uniprot:G4N440
Length = 625
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 57/182 (31%), Positives = 83/182 (45%)
Query: 46 LGNKPILSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSL 105
LG P ++D+ ANRLS + V ++E+G + T PL+A +
Sbjct: 33 LGGSP---QFDYVIVGGGTAGLALANRLSADASISVAVVEAGTYYEV-TQ-PLIASTPAG 87
Query: 106 -THFNWGYKLEKNE-------EHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKD 157
T F + N PQ G + RGK LGGSS N+MIY RG+K+
Sbjct: 88 DTLFVGSDPSDTNPLVDLDFVTEPQA-GANGRKIHYARGKCLGGSSARNFMIYQRGSKQS 146
Query: 158 YDTY-EAAGNKGWGYDSVLKYFLKS-----------ENNTSEFLDADIHSREGPLKVTNI 205
Y + +A G+ + +D++L YF KS EN T+E+ S GPL+VT+
Sbjct: 147 YQKWADAIGDNSYTWDALLPYFKKSVAFTPPGSSRFENATAEYNPQAFSSSGGPLRVTSA 206
Query: 206 PY 207
Y
Sbjct: 207 NY 208
>ASPGD|ASPL0000027758 [details] [associations]
symbol:gmcA species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IDA] [GO:0070787 "conidiophore
development" evidence=IMP] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0016614 "oxidoreductase activity, acting
on CH-OH group of donors" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000172
InterPro:IPR007867 InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199
PIRSF:PIRSF000137 PROSITE:PS00624 GO:GO:0050660 EMBL:BN001305
GO:GO:0006066 GO:GO:0008812 EnsemblFungi:CADANIAT00003039
OMA:ENTDFNG Uniprot:C8VER6
Length = 576
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 45/149 (30%), Positives = 69/149 (46%)
Query: 55 YDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKL 114
YD+ A RL+EN ++LLLE+G+ N+ + +++ N+ +
Sbjct: 11 YDYIVCGGGTSGCVVAGRLAENKDVRILLLEAGQHNRDLENVHMAGGWSN----NFDSET 66
Query: 115 EKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSV 174
+ N G+ N Q RG+ LGGSS N + RG+K+DYD + G +GW D
Sbjct: 67 DWNLITKPMAGVDNRQVKLSRGRFLGGSSGCNGTLCIRGSKQDYDDW---GLEGWSGDEF 123
Query: 175 LKYFLKSEN-NTSEFLDAD--IHSREGPL 200
+ KSE + + AD H GPL
Sbjct: 124 FEAMKKSETFHGKPWFKADESAHGYSGPL 152
>UNIPROTKB|C9J7D8 [details] [associations]
symbol:CHDH "Choline dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0008812 "choline dehydrogenase
activity" evidence=IEA] InterPro:IPR000172 Pfam:PF00732
PROSITE:PS00623 GO:GO:0005743 GO:GO:0050660 EMBL:AC012467
GO:GO:0008812 HGNC:HGNC:24288 ChiTaRS:CHDH IPI:IPI00796003
ProteinModelPortal:C9J7D8 SMR:C9J7D8 STRING:C9J7D8
Ensembl:ENST00000481668 HOGENOM:HOG000213904 ArrayExpress:C9J7D8
Bgee:C9J7D8 Uniprot:C9J7D8
Length = 155
Score = 124 (48.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 42/142 (29%), Positives = 63/142 (44%)
Query: 34 RQQGLEFRENIFLGNKPILSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDE--- 90
+QQ L R G++ EY + A RL+E+P +VLLLE+G +
Sbjct: 21 QQQSLGARALASAGSES-RDEYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLA 79
Query: 91 -------NIYTNIPLLAHFNSLTHFNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSS 143
I+ L+A+ +NW Y E G+ PRG+ GGSS
Sbjct: 80 GSKRLSWKIHMPAALVANLCD-DRYNWCYHTEVQR------GLDGRVLYWPRGRVWGGSS 132
Query: 144 ILNYMIYTRGNKKDYDTYEAAG 165
LN M+Y RG+ +DY+ ++ G
Sbjct: 133 SLNAMVYVRGHAEDYERWQRQG 154
>UNIPROTKB|G4NA69 [details] [associations]
symbol:MGG_15347 "Choline dehydrogenase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00624 GO:GO:0050660 GO:GO:0006066 EMBL:CM001234
GO:GO:0008812 RefSeq:XP_003715938.1 EnsemblFungi:MGG_15347T0
GeneID:12986822 KEGG:mgr:MGG_15347 Uniprot:G4NA69
Length = 609
Score = 144 (55.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 42/147 (28%), Positives = 65/147 (44%)
Query: 54 EYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNI--PLLAHFNSLTHFNWG 111
EYDF ANRLSE+ K ++L+LE+G + + + P F T +W
Sbjct: 30 EYDFIIAGGGTAGLVLANRLSESGKNRILVLEAGPEPTVVSAYKPPGGNQFLGGTAIDWS 89
Query: 112 YKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGY 171
+ E + Y+ RG+ LGGSS+ N + RG+ +D + GN GWG+
Sbjct: 90 FYTSPQEHMDDRVLRYH------RGRCLGGSSVTNGFYHGRGSASVFDDWVRLGNPGWGW 143
Query: 172 DSVLKYFLKSENNTSEFLDADIHSREG 198
+ +K + F D H +G
Sbjct: 144 HDLYPLAVKG----THFNPPDDHELKG 166
>ASPGD|ASPL0000042071 [details] [associations]
symbol:AN9011 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016614
"oxidoreductase activity, acting on CH-OH group of donors"
evidence=IEA] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00623 PROSITE:PS00624 GO:GO:0050660 EMBL:BN001307
GO:GO:0006066 EMBL:AACD01000168 eggNOG:COG2303 GO:GO:0008812
HOGENOM:HOG000139601 RefSeq:XP_682280.1
EnsemblFungi:CADANIAT00007843 GeneID:2868258 KEGG:ani:AN9011.2
OMA:HLESETS OrthoDB:EOG4897VN Uniprot:Q5ARR9
Length = 617
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 54/189 (28%), Positives = 83/189 (43%)
Query: 55 YDFXXXXXXXXXXXXANRLSENPKWKVLLLESGE----DENIYTNIPLLAHFNSLTHFNW 110
+DF A RLSE V ++E+G+ D I T + F ++W
Sbjct: 25 FDFIVCGGGTAGLAIAARLSEISNVNVGIVEAGKYRIGDPLIETPATFMQMFED-PEYDW 83
Query: 111 GYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEA-AGNKGW 169
E + G + PRGK LGGSS +NY++Y RG+ +DYD + A G++GW
Sbjct: 84 CLFTAPQEANN---GKVHH---IPRGKVLGGSSAINYLMYVRGSLQDYDDWAALVGDEGW 137
Query: 170 GYDSVLKYFLKSE----NNTSEFLDADI----HSREGPLKVTNIPYQNLLTEK-FTQAKE 220
++ Y K + N S+ + I H GP++ T+ NL E F +A
Sbjct: 138 SAANMKAYMRKHQAQPVNPESKAAASPIAPEHHGTTGPIR-TSFNESNLPIETDFVKACA 196
Query: 221 GPLKVTNIP 229
+ N+P
Sbjct: 197 ETANLPNMP 205
>ASPGD|ASPL0000038310 [details] [associations]
symbol:AN3206 species:162425 "Emericella nidulans"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0016614 "oxidoreductase activity, acting on CH-OH group of
donors" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR000172 InterPro:IPR007867 InterPro:IPR012132
Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137 PROSITE:PS00623
PROSITE:PS00624 GO:GO:0050660 EMBL:BN001306 GO:GO:0006066
eggNOG:COG2303 GO:GO:0008812 EMBL:AACD01000053 RefSeq:XP_660810.1
ProteinModelPortal:Q5B8C4 EnsemblFungi:CADANIAT00009860
GeneID:2874328 KEGG:ani:AN3206.2 HOGENOM:HOG000171737 OMA:WENMKER
OrthoDB:EOG42RHGQ Uniprot:Q5B8C4
Length = 575
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 53/166 (31%), Positives = 81/166 (48%)
Query: 55 YDFXXXXXXXXXXXXANRLSENPKW-KVLLLESGEDENIYTNIPLLAHFNSLTHF----- 108
+DF A++L+ + ++LLLE+G+ ++ T L N T F
Sbjct: 7 WDFIIVGSGPAGSTLASKLALSAAQPRILLLEAGQRKDDRT---LRVSGNRWTTFQEADI 63
Query: 109 NWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTY-EAAGNK 167
NWGYK +EH C G D RGK LGG S +N+ IYT G K DYD + E G+
Sbjct: 64 NWGYKTTP-QEH--CNGREIDYS---RGKVLGGGSAINFGIYTVGAKDDYDAWAEIVGDD 117
Query: 168 GWGYDSVLKYFLKSEN-NTS-------EFL--DADIHSREGPLKVT 203
+ ++++ + F EN +TS F ++ H R+G LK++
Sbjct: 118 LFNWENMKERFKAIENFDTSIKNEAYRSFAAPKSEDHGRDGALKLS 163
>ASPGD|ASPL0000015753 [details] [associations]
symbol:AN4212 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016614
"oxidoreductase activity, acting on CH-OH group of donors"
evidence=IEA] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00624 GO:GO:0050660 EMBL:BN001302 GO:GO:0006066
eggNOG:COG2303 GO:GO:0008812 EMBL:AACD01000068 HOGENOM:HOG000139601
OrthoDB:EOG44J5SB RefSeq:XP_661816.1 ProteinModelPortal:Q5B5G8
EnsemblFungi:CADANIAT00004450 GeneID:2873635 KEGG:ani:AN4212.2
OMA:WPEVEYL Uniprot:Q5B5G8
Length = 607
Score = 135 (52.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 59/190 (31%), Positives = 88/190 (46%)
Query: 46 LGNKPILSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESG---EDEN-IYTNIP-LLA 100
LG I YD+ A RL+E+P V ++E+G E E + + IP A
Sbjct: 24 LGVPGISWSYDYVVVGGGTSGLAIAARLAEDPGVTVAVVEAGGHYEIEGGMESIIPGFAA 83
Query: 101 HFNSLTH-FNWGYKLEKN-EEHPQCLGMYNDQC-PCPRGKGLGGSSILNYMIYTRGNKKD 157
N+ T + ++ N + P L ND+ RGK LGG+S N M+Y RG +K
Sbjct: 84 ASNTGTDPSDDSLLIDWNFDTLP--LTAANDRVLRYARGKCLGGTSARNLMVYHRGTQKT 141
Query: 158 YDTY-EAAGNKGWGYDSVLKYFLKSENNTSEFLDADIHSREGPLKVTNIPYQNLLTEKFT 216
YD + + G+ W ++SVL YF KS T D+ R K +++ Y + F
Sbjct: 142 YDQWADITGDSSWAWESVLPYFKKSCTLTPP----DMTKRN---KNSSVTYN---ADAFD 191
Query: 217 QAKEGPLKVT 226
+GPL V+
Sbjct: 192 NDLDGPLHVS 201
>ASPGD|ASPL0000055311 [details] [associations]
symbol:AN9348 species:162425 "Emericella nidulans"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016614
"oxidoreductase activity, acting on CH-OH group of donors"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000172 InterPro:IPR007867 InterPro:IPR012132
Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137 PROSITE:PS00624
EMBL:BN001308 GO:GO:0050660 GO:GO:0006066 EMBL:AACD01000172
eggNOG:COG2303 GO:GO:0008812 HOGENOM:HOG000139601
RefSeq:XP_682617.1 ProteinModelPortal:Q5AQT2
EnsemblFungi:CADANIAT00001134 GeneID:2867815 KEGG:ani:AN9348.2
OrthoDB:EOG4JT3DV Uniprot:Q5AQT2
Length = 672
Score = 110 (43.8 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 57/217 (26%), Positives = 85/217 (39%)
Query: 38 LEFRENIFLGNKPILSEYDFXXXXXXXXXXXXANRLSENPKWKV---------------- 81
+ F I G IL YD+ ANRL+E+P+ V
Sbjct: 56 ISFPGTILNGGTGILPSYDYVIVGGGVSGLVVANRLTEDPESMVTSFDIDLMPVKLTVQV 115
Query: 82 ---LLLESGEDENI-----YTNIPLLAHFNSLTHFNWGYKLEKNEEHPQCLGMYNDQC-P 132
L++E+G+ +N Y LLA N+ +W + E ND+ P
Sbjct: 116 ATVLVIEAGKIDNHSPAIQYPRNVLLAPVNN----SWPITSLPDAE-------LNDRTTP 164
Query: 133 CPRGKGLGGSSILNYMIYTRGNKKDYDTY-EAAGNKGWGYDSVLKYFLKSENNT------ 185
G LGG +N M + RG+ DYD + + G+ W + +L YF KSE T
Sbjct: 165 VQAGLVLGGGGAINGMAFDRGSPGDYDLWGKLIGDDSWSWIGLLPYFKKSETFTPPSEDL 224
Query: 186 -SEF---LDADIHSREGPLKVTNIPYQNLLTEKFTQA 218
EF + D H GP+ + P+ + F +A
Sbjct: 225 QEEFGIGFEPDAHGFAGPVHSSYPPFITTTQKSFIRA 261
Score = 57 (25.1 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 207 YQNLLTEKFTQAKEGPLKVTNIPYQNLLTEKFTQAACELGYRIYDYTGIEPA-TEGFSKL 265
Y+ T ++T + E L Y N+ T TQAA + + G++P +G+ K+
Sbjct: 438 YELNRTGRWTASWENILSFLTAEYLNVSTTSLTQAAQQPADKFLR-PGLDPTIVQGYEKV 496
Query: 266 QSTLSK 271
+S K
Sbjct: 497 KSATLK 502
>UNIPROTKB|G4MYF5 [details] [associations]
symbol:MGG_10479 "Oxidoreductase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000172 InterPro:IPR007867
InterPro:IPR012132 Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137
PROSITE:PS00623 PROSITE:PS00624 GO:GO:0050660 GO:GO:0006066
EMBL:CM001232 GO:GO:0008812 RefSeq:XP_003713382.1
EnsemblFungi:MGG_10479T0 GeneID:2682112 KEGG:mgr:MGG_10479
Uniprot:G4MYF5
Length = 646
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 51 ILSEYDFXXXXXXXXXXXXANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNW 110
+ YD+ +RLSE+ K VL++E G+ N+ + F + +
Sbjct: 38 LADSYDYVIVGGGTAGLTLGDRLSEDGKNSVLVVEYGDLVNVSAITEVQGGFQGMNP-EF 96
Query: 111 GYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEA--AGNKG 168
+ L PQ + N + GK LGG+S +N M+ RG +DYD + N
Sbjct: 97 MFSLTSV---PQT-NLRNRRAGVFAGKVLGGTSAINAMMAIRGTAEDYDRWGRFFGANST 152
Query: 169 WGYDSVLKYFLKS 181
W ++ +L YF K+
Sbjct: 153 WSWEGMLPYFKKA 165
>UNIPROTKB|P95043 [details] [associations]
symbol:MT0724 "Probable dehydrogenase" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR000172 InterPro:IPR007867 InterPro:IPR012132
Pfam:PF00732 Pfam:PF05199 PIRSF:PIRSF000137 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0050660 EMBL:BX842574 GO:GO:0006066 GO:GO:0008812
HOGENOM:HOG000139601 EMBL:AL123456 PIR:D70641 RefSeq:NP_215211.1
RefSeq:NP_335139.1 RefSeq:YP_006514041.1 SMR:P95043 DNASU:888316
EnsemblBacteria:EBMYCT00000001809 EnsemblBacteria:EBMYCT00000069412
GeneID:13318586 GeneID:888316 GeneID:926012 KEGG:mtc:MT0724
KEGG:mtu:Rv0697 KEGG:mtv:RVBD_0697 PATRIC:18123321
TubercuList:Rv0697 OMA:FLIYTRG ProtClustDB:CLSK790688
InterPro:IPR023978 TIGRFAMs:TIGR03970 Uniprot:P95043
Length = 479
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 29/89 (32%), Positives = 42/89 (47%)
Query: 132 PCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGWGYDSVLKYFLKSENNTSEFLDA 191
P RG +GGS +N + RG D+D A GW + VL++F E + +F +
Sbjct: 83 PIVRGATVGGSGAINGGYFCRGLPSDFDR---ASIPGWAWSDVLEHFRAIETDL-DF-ET 137
Query: 192 DIHSREGPLKVTNIPYQNLLTEKFTQAKE 220
+H R GP+ V +TE F A E
Sbjct: 138 PVHGRSGPIPVRRTHEMTGITESFMAAAE 166
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 284 272 0.00099 114 3 11 22 0.39 34
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 53
No. of states in DFA: 608 (65 KB)
Total size of DFA: 214 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.25u 0.13s 21.38t Elapsed: 00:00:01
Total cpu time: 21.26u 0.13s 21.39t Elapsed: 00:00:01
Start: Thu Aug 15 11:26:54 2013 End: Thu Aug 15 11:26:55 2013