RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4112
(284 letters)
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 117 bits (293), Expect = 4e-31
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG---EDENIYTNIPLLAHFNSLTHFNW 110
YD++I GGG+ G VA +L+ENPK KVL++E G ++ P T +
Sbjct: 24 TYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQ 83
Query: 111 GYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTY-EAAGNKGW 169
Y P + N GKGLGGS+++N +TR +K D++ + G +GW
Sbjct: 84 NYLTV-----PL---INNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGW 135
Query: 170 GYDSVLKYFLKSENNTSEF---------LDADIHSREGPLKVTNIPYQNLLTE 213
+D++ +Y K+E + +A H G ++ +
Sbjct: 136 NWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSP 188
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 112 bits (280), Expect = 2e-29
Identities = 26/242 (10%), Positives = 48/242 (19%), Gaps = 36/242 (14%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYK 113
+YD VI+G G G A L +KV + + GE ++ + +
Sbjct: 4 KYDVVIVGSGPIGCTYARELVGAG-YKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFV 62
Query: 114 LEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYD--------TYEAAG 165
+ + + N + G
Sbjct: 63 NV--IQGQLMSVSVPVNTLVVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVG 120
Query: 166 NKGWGYDSVLKYFLKSENNTSEFLDADIHSREGPLKVTNIPYQNLLTEKFTQAKEGPLKV 225
+ F + + DAD E T
Sbjct: 121 GMSTHWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKAE------------------- 161
Query: 226 TNIPYQNLLTEKFTQAACELGY-RIYDYTGIEPATEGFSKL--QSTLSKGQRYSANRAYL 282
Y T++F ++ L +S+
Sbjct: 162 ---SYFQTGTDQFKESIRHNLVLNKLAEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVF 218
Query: 283 KS 284
Sbjct: 219 DL 220
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 106 bits (264), Expect = 5e-27
Identities = 41/202 (20%), Positives = 68/202 (33%), Gaps = 22/202 (10%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG---EDENIYTNIPLLAHFNSLTHFNW 110
D++I GGG+ G A RL+ENP VL++ESG D + +
Sbjct: 17 TVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDH 76
Query: 111 GYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKG-W 169
Y+ L N G GLGGS+++N +TR +K D++E W
Sbjct: 77 AYE-------TVELATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGW 129
Query: 170 GYDSVLKYFLKSENNTSEFLDADIHSREGPLKVTNIPYQNLLTEKFTQAKEGPLKVTNIP 229
+D+V Y L++E + + +
Sbjct: 130 NWDNVAAYSLQAERARAPNAKQIAA-----------GHYFNASCHGVNGTVHAGPRDTGD 178
Query: 230 YQNLLTEKFTQAACELGYRIYD 251
+ + + A + G
Sbjct: 179 DYSPIVKALMSAVEDRGVPTKK 200
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 100 bits (249), Expect = 4e-25
Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 48 NKPILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTH 107
+ + YD+VI+GGG G +A LSE +KVL+LE G Y N+ F
Sbjct: 20 DLELEGSYDYVIVGGGTSGCPLAATLSEK--YKVLVLERGSLPTAYPNVLTADGFVYNLQ 77
Query: 108 FNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNK 167
K P + D RG+ LGG+SI+N +Y R N Y A
Sbjct: 78 QEDDGK------TPVERFVSEDGIDNVRGRVLGGTSIINAGVYARANTSIYS----ASGV 127
Query: 168 GWGYDSVLKYFLKSENN 184
W D V + + E+
Sbjct: 128 DWDMDLVNQTYEWVEDT 144
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 89.6 bits (221), Expect = 4e-21
Identities = 19/167 (11%), Positives = 47/167 (28%), Gaps = 22/167 (13%)
Query: 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIP--------------- 97
++IG G GG+V A RL++ ++E G + +
Sbjct: 6 DRVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRSMW 64
Query: 98 ----LLAHFNSLTHFNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRG 153
++ F +++ +G+G+GG S++N +
Sbjct: 65 LADKTDQPVSNFMGFGINKSIDR--YVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTP 122
Query: 154 NKKDYDTYEAAGNKGWGYDSVLKYFLKSENNTSEFLDADIHSREGPL 200
+ ++ + + Y+ + +
Sbjct: 123 KRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAWFESTEWYKF 169
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 84.3 bits (207), Expect = 3e-19
Identities = 33/245 (13%), Positives = 68/245 (27%), Gaps = 41/245 (16%)
Query: 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESG-EDENIYTNIPLLAHFNSLTH------ 107
V+IG G G +V A RL E + L+LE G + + +
Sbjct: 3 VPAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFK 61
Query: 108 -----------FNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKK 156
+ + + DQ G+G+GG S++N + +
Sbjct: 62 NRTEAPLGSFLWLDVVNRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRS 121
Query: 157 DYDTYEAAGNKGWGYDSVLKYFLKSENNTSEFLDADIHSREGPLKVTNIPYQNLLTEKFT 216
++ + + +YF ++ + + K
Sbjct: 122 YFEEIL---PRVDSSEMYDRYFPRANSM--------LRVNHIDTKWFEDTEWYKFARVSR 170
Query: 217 QAKEGPLKVTNIPYQNLLTEKFTQAACELGYRIYDYTGIEPATEGFSKLQSTLSKGQRYS 276
+ + L F + GY + G P + + + + S
Sbjct: 171 EQAG----------KAGLGTVFVPNVYDFGYMQREAAGEVPKS-ALATEVIYGNNHGKQS 219
Query: 277 ANRAY 281
++ Y
Sbjct: 220 LDKTY 224
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 80.5 bits (197), Expect = 7e-18
Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 12/136 (8%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLT-----HF 108
YD++I+G G GG + A+RLSE K KVLLLE G T +A + + +
Sbjct: 2 PYDYIIVGAGPGGIIAADRLSEAGK-KVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDI 60
Query: 109 NWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKG 168
++ + +P + G +GG + +N +Y N D+ +
Sbjct: 61 PGLFESLFTDSNP---FWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSV---GWP 114
Query: 169 WGYDSVLKYFLKSENN 184
+ + Y K +
Sbjct: 115 SSWTNHAPYTSKLSSR 130
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 46.8 bits (109), Expect = 1e-06
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
EYD +++G G+ +++ +S N K KVL ++
Sbjct: 6 EYDVIVLGTGLTECILSGIMSVNGK-KVLHMDRNP 39
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 297
Score = 46.0 bits (107), Expect = 2e-06
Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYK 113
+YD +++G G+ +++ LS + K KVL ++ + L+ N K
Sbjct: 5 DYDVIVLGTGITECILSGLLSVDGK-KVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISK 63
Query: 114 LEKNEEHPQCLGMYNDQCPCP 134
E+ + + D P
Sbjct: 64 EERESKFGKDRDWNVDLIPKF 84
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4
{Thale cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 45.3 bits (106), Expect = 3e-06
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
+E D V++G G G A +S+NP +V ++E
Sbjct: 32 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 67
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus
sp. [TaxId: 1409]}
Length = 276
Score = 43.2 bits (100), Expect = 2e-05
Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Query: 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE--DENIYTNIPLLAHFNSLTHFNW 110
Y+ V+IGGG+ GS +A L++ L ESG +L +
Sbjct: 3 RHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGTMGGRTTSAAAGMLGAHAECEERDA 61
Query: 111 GYKLEKNEEHPQCLGMYNDQCPC 133
+ + +
Sbjct: 62 FFDFAMHSQRLYKGLGEELYALS 84
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 223
Score = 42.5 bits (99), Expect = 2e-05
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYK 113
E + +++G G GG V A R ++ KV ++E G + N+ + ++ + +
Sbjct: 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQ 61
Query: 114 LEKNEEHPQC 123
+ +EE
Sbjct: 62 AKHSEEMGIK 71
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 42.6 bits (99), Expect = 2e-05
Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 6/90 (6%)
Query: 52 LSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLES----GEDENIYTNIPLLAHFNSLTH 107
++ YD+++IGGG GG A R +E + ++ES G N+ + ++ H
Sbjct: 1 VASYDYLVIGGGSGGLASARRAAEL-GARAAVVESHKLGGTCVNVGCVPKKVMWNTAV-H 58
Query: 108 FNWGYKLEKNEEHPQCLGMYNDQCPCPRGK 137
+ + R
Sbjct: 59 SEFMHDHADYGFPSCEGKFNWRVIKEKRDA 88
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 42.8 bits (99), Expect = 2e-05
Identities = 8/36 (22%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
+ +D +++G G G +L++ K LL+++ +
Sbjct: 2 THFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFD 36
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 41.6 bits (96), Expect = 4e-05
Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYK 113
++D +IIGGG GG A ++ KV++L+ + TN L
Sbjct: 3 DFDLIIIGGGSGGLAAAKEAAKF-DKKVMVLDFVTPTPLGTNWGLGGTCV-NVGCIPKKL 60
Query: 114 LEKNEEHPQCLGMYNDQC 131
+ + Q L +
Sbjct: 61 MHQAALLGQALKDSRNYG 78
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 41.6 bits (96), Expect = 4e-05
Identities = 12/86 (13%), Positives = 27/86 (31%), Gaps = 2/86 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDEN--IYTNIPLLAHFNSLTHFNWG 111
+D V+IG G GG A + K +V +++ ++ +
Sbjct: 3 IFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLM 62
Query: 112 YKLEKNEEHPQCLGMYNDQCPCPRGK 137
+ EH + + + +
Sbjct: 63 VTGAQYMEHLRESAGFGWEFDRTTLR 88
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 41.6 bits (96), Expect = 4e-05
Identities = 21/135 (15%), Positives = 37/135 (27%), Gaps = 13/135 (9%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED------------ENIYTNIPLLAH 101
YD ++IGGG G + A +E VLLL+ G N+ +PL
Sbjct: 2 HYDVIVIGGGPSGLMAAIGAAEE-GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEI 60
Query: 102 FNSLTHFNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTY 161
+ + + + + + + + G
Sbjct: 61 VKHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRL 120
Query: 162 EAAGNKGWGYDSVLK 176
+ G K V
Sbjct: 121 KDLGVKIRTNTPVET 135
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 41.2 bits (95), Expect = 6e-05
Identities = 15/116 (12%), Positives = 35/116 (30%), Gaps = 10/116 (8%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYK 113
++D ++IG G GG V A + ++ K L+E + + T +
Sbjct: 3 KFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYKGKEGKTALG---------GTCLNVG 52
Query: 114 LEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGW 169
++ +++ + G+ + + K G
Sbjct: 53 CIPSKALLDSSYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASL 108
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 41.2 bits (95), Expect = 7e-05
Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 1/83 (1%)
Query: 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKL 114
YD ++IGGG GG A R + + KV L+E N+ + + L
Sbjct: 2 YDLIVIGGGSGGMAAARRAARH-NAKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDIL 60
Query: 115 EKNEEHPQCLGMYNDQCPCPRGK 137
E + + + +
Sbjct: 61 ENSRHYGFDTKFSFNLPLLVERR 83
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 40.7 bits (94), Expect = 8e-05
Identities = 13/84 (15%), Positives = 24/84 (28%), Gaps = 2/84 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYK 113
YD V+IG G GG + K +V +++ + L + K
Sbjct: 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGT--CVNVGCVPKK 60
Query: 114 LEKNEEHPQCLGMYNDQCPCPRGK 137
L + + +
Sbjct: 61 LMVTGANYMDTIRESAGFGWELDR 84
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 39.9 bits (92), Expect = 2e-04
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
+EYD V++GGG GG A ++ KV ++E +
Sbjct: 5 AEYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYK 39
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide
dehydrogenase {Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 39.6 bits (91), Expect = 2e-04
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
+ +IIGGG GG V A R + +L+E
Sbjct: 5 QTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQA 38
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 39.5 bits (91), Expect = 2e-04
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
YD++ IGGG GG NR + K L+E+ E
Sbjct: 2 HYDYIAIGGGSGGIASINRAAMY-GQKCALIEAKE 35
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide
dehydrogenase {Garden pea (Pisum sativum) [TaxId:
3888]}
Length = 221
Score = 39.4 bits (91), Expect = 2e-04
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
E D VIIGGG GG V A + ++ +K +E
Sbjct: 3 ENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRG 36
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 380
Score = 39.5 bits (91), Expect = 3e-04
Identities = 13/40 (32%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Query: 54 EYDFVIIGGGVGGSVVANRLS-----ENPKWKVLLLESGE 88
E D VI+G G G A RL +V L+E
Sbjct: 32 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA 71
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 39.4 bits (91), Expect = 3e-04
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLES 86
YD++I+G G+ G+V AN L + KVL++E
Sbjct: 2 YDYIIVGSGLFGAVCANELKKL-NKKVLVIEK 32
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 39.4 bits (90), Expect = 3e-04
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
VIIG G+ G+ +A+ L + +L+ G
Sbjct: 2 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 35
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide
dehydrogenase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 233
Score = 38.7 bits (89), Expect = 4e-04
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
+D VIIGGG G V A + ++ + +E
Sbjct: 5 SHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRG 38
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 38.9 bits (89), Expect = 4e-04
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87
D V++G G G A +++ KV+L+E
Sbjct: 16 TVDVVVVGSGGAGFSAAISATDSGA-KVILIEKE 48
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 288
Score = 38.6 bits (88), Expect = 5e-04
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89
D +I G G+GG A L + KV LLES +
Sbjct: 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 36
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 38.0 bits (86), Expect = 8e-04
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
+++G G+ G A RLSE +L+LE+ +
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 37.6 bits (86), Expect = 0.001
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89
+ +IIG G G A +L++ V + ++G+
Sbjct: 5 SENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGKK 38
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 37.7 bits (86), Expect = 0.001
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87
D VIIG G G A + KV+LLE
Sbjct: 23 TTDVVIIGSGGAGLAAAVSARDAGA-KVILLEKE 55
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter
sp., py2 [TaxId: 35809]}
Length = 261
Score = 37.2 bits (85), Expect = 0.001
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED 89
EYD + IGGG G + L + L+++
Sbjct: 42 EYDAIFIGGGAAGRFGSAYLRAMGG-RQLIVDRWPF 76
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 37.4 bits (85), Expect = 0.001
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
+ ++GGG+ G VA+ L +LLES
Sbjct: 2 NVAVVGGGISGLAVAHHLRSRG-TDAVLLESSA 33
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 36.8 bits (84), Expect = 0.002
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87
D +IIG G G +A RL++ +V++L G
Sbjct: 7 SCDVLIIGSGAAGLSLALRLADQH--QVIVLSKG 38
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 311
Score = 36.8 bits (84), Expect = 0.002
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 53 SEYDFVIIGGGVGGSVVANRLSE-NPKWKVLLLESGE 88
+ D +I+G G G A +++ P KV ++ES
Sbjct: 49 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 85
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 37.0 bits (84), Expect = 0.002
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
D V++GGG+ G A L ++ V++LE+ +
Sbjct: 1 DVVVVGGGISGMAAAKLLHDS-GLNVVVLEARD 32
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 36.2 bits (82), Expect = 0.002
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPL 98
S F++IGGG A + +L+ S + E Y PL
Sbjct: 3 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPL 48
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase
{Escherichia coli [TaxId: 562]}
Length = 311
Score = 36.5 bits (83), Expect = 0.002
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 54 EYDFVIIGGGVGGSVVANRLSE-NPKWKVLLLE 85
+ D I+G G G A ++ NP K+ L+
Sbjct: 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALIS 37
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase
{Soil-living yeast (Trichosporon cutaneum) [TaxId:
5554]}
Length = 360
Score = 36.6 bits (83), Expect = 0.003
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 53 SEYDFVIIGGGVGGSVVANRLSENPK----WKVLLLE 85
S D +I+G G G + A LSE + KV +++
Sbjct: 6 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIID 42
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 36.1 bits (82), Expect = 0.003
Identities = 5/34 (14%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87
+++G G G + + V+L++
Sbjct: 19 TTQVLVVGAGSAGFNASLAAKKAGA-NVILVDKA 51
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 35.9 bits (81), Expect = 0.004
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87
D ++IGGG+ G A + ++L
Sbjct: 5 YCDSLVIGGGLAGLRAAVATQQKGL-STIVLSLI 37
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 35.7 bits (81), Expect = 0.004
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKW---KVLLLESG 87
E D +IIGGG G A + K KV L+E
Sbjct: 21 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKA 57
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 35.9 bits (81), Expect = 0.004
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 39 EFRENIFLGNKPILSEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
EF E G K + VI+G G+ G A L+ +V +LE+ E
Sbjct: 15 EFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAG-HQVTVLEASE 63
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 35.2 bits (80), Expect = 0.006
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESG 87
E+D V+IG G G A ++S++ + LL
Sbjct: 7 EFDAVVIGAGGAGMRAALQISQSGQ-TCALLSKV 39
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 34.0 bits (76), Expect = 0.010
Identities = 18/140 (12%), Positives = 35/140 (25%), Gaps = 11/140 (7%)
Query: 56 DFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLE 115
+ VI+G G+ G VA L + + L + PL + + L
Sbjct: 5 NVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLR 64
Query: 116 KNEEHPQCLGMYNDQCPCPRGKGLGG-----------SSILNYMIYTRGNKKDYDTYEAA 164
+ + L R + + AA
Sbjct: 65 TPDAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPLIPNCELASAA 124
Query: 165 GNKGWGYDSVLKYFLKSENN 184
G + + ++ S+
Sbjct: 125 GLQVDNGIVINEHMQTSDPL 144
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 34.4 bits (77), Expect = 0.011
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 58 VIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
+IG GV G A +L + V + E+
Sbjct: 5 AVIGAGVSGLAAAYKLKIHG-LNVTVFEAEG 34
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 34.1 bits (77), Expect = 0.012
Identities = 18/113 (15%), Positives = 32/113 (28%), Gaps = 4/113 (3%)
Query: 58 VIIGGGVGGSVVANRLSENPKWKVLLLESG---EDENIYTNIPLLAHFNSLTHFNWGYKL 114
V+IG GV G A + E VL D +A + +
Sbjct: 4 VVIGAGVIGLSTALCIHER-YHSVLQPLDVKVYADRFTPFTTTDVAAGLWQPYTSEPSNP 62
Query: 115 EKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNK 167
++ + Q P +G + + Y ++ Y G +
Sbjct: 63 QEANWNQQTFNYLLSHIGSPNAANMGLTPVSGYNLFREAVPDPYWKDMVLGFR 115
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 33.6 bits (75), Expect = 0.014
Identities = 13/81 (16%), Positives = 24/81 (29%), Gaps = 1/81 (1%)
Query: 58 VIIGGGVGGSVVANRLSE-NPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLEK 116
V++GGG GG+ A + +P +V L+E D + +
Sbjct: 6 VVVGGGTGGATAAKYIKLADPSIEVTLIEPNTDYYTCYLSNEVIGGDRKLESIKHGYDGL 65
Query: 117 NEEHPQCLGMYNDQCPCPRGK 137
Q + +
Sbjct: 66 RAHGIQVVHDSATGIDPDKKL 86
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 449
Score = 34.5 bits (77), Expect = 0.014
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 58 VIIGGGVGGSVVANRLSENPKWKVLLLESGE 88
+IIG GV G A +L V LLE+ +
Sbjct: 9 IIIGSGVSGLAAARQLQSF-GMDVTLLEARD 38
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 34.0 bits (77), Expect = 0.015
Identities = 16/114 (14%), Positives = 39/114 (34%), Gaps = 9/114 (7%)
Query: 57 FVIIGGGVGGSVVANRLSENPKWKVLLLESGE--------DENIYTNIPLLAHFNSLTHF 108
+I+G G G+V+ +L+E +V +++ + + TN+ + + + H
Sbjct: 5 ILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHT 63
Query: 109 NWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYE 162
+ +H + + N G+ L+ + D
Sbjct: 64 DNETVWNYVNKHAEMMPYVNRVKATVNGQVFSLPINLHTINQFFSKTCSPDEAR 117
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 33.9 bits (76), Expect = 0.016
Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 3/95 (3%)
Query: 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGE--DENIYTNIPLLAHFNSLTHFNW 110
S+ V++G GV G A L+ + V +L D + T A N
Sbjct: 5 SQKRVVVLGSGVIGLSSALILARK-GYSVHILARDLPEDVSSQTFASPWAGANWTPFMTL 63
Query: 111 GYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSIL 145
+ + + + P L G+
Sbjct: 64 TDGPRQAKWEESTFKKWVELVPTGHAMWLKGTRRF 98
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate
hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 33.8 bits (76), Expect = 0.019
Identities = 8/36 (22%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDE 90
IIG G G ++ L + ++LE +
Sbjct: 3 TQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQTPD 37
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 32.8 bits (73), Expect = 0.039
Identities = 7/28 (25%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 58 VIIGGGVGGSVVANRLSENPKWKVLLLE 85
++GG + G A L + V + E
Sbjct: 8 AVVGGSISGLTAALMLRDA-GVDVDVYE 34
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 233
Score = 32.0 bits (71), Expect = 0.067
Identities = 12/114 (10%), Positives = 28/114 (24%), Gaps = 2/114 (1%)
Query: 58 VIIGGGVGGSVVANRLSENPK--WKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLE 115
VI+GGG G A + + +V +++ + + +L
Sbjct: 5 VILGGGPAGYEAALVAATSHPETTQVTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELR 64
Query: 116 KNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGW 169
+ + + + P+ + AG
Sbjct: 65 RAPHLGFHIDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGEL 118
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 180
Score = 30.8 bits (68), Expect = 0.13
Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Query: 59 IIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLEKNE 118
I+G G GS ++ L +N +V + + D I +I L G ++ E
Sbjct: 5 ILGAGAMGSALSVPLVDN-GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPE 63
Query: 119 EHPQCLGMYNDQCPCP 134
+ +CL
Sbjct: 64 QLEKCLENAEVVLLGV 79
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 30.6 bits (68), Expect = 0.18
Identities = 17/81 (20%), Positives = 27/81 (33%), Gaps = 3/81 (3%)
Query: 54 EYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGED--ENIYTNIPLLAHFNSLTHFNWG 111
E D +++G G G RL E V ++E+ D Y N A + +
Sbjct: 7 EVDVLVVGAGFSGLYALYRLRE-LGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCY 65
Query: 112 YKLEKNEEHPQCLGMYNDQCP 132
E+ + Y Q
Sbjct: 66 SFSEEVLQEWNWTERYASQPE 86
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 30.1 bits (66), Expect = 0.19
Identities = 9/78 (11%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Query: 58 VIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLEKN 117
V++G G+ L + ++ L+ G++ + P L+ +L+
Sbjct: 7 VVLGAGLASVSFVAELRQA-GYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCK 65
Query: 118 EEHPQCLGMYNDQCPCPR 135
+
Sbjct: 66 RAPEVEWLLGVTAQSFDP 83
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase
{Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 30.1 bits (66), Expect = 0.21
Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 58 VIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLEKN 117
VI+G G GG +A +LS+ ++V +++ ++ Y + P+L+H+ +
Sbjct: 4 VIVGNGPGGFELAKQLSQT--YEVTVID--KEPVPYYSKPMLSHYIAGFIPRNRLFPYSL 59
Query: 118 EEHPQCLGMYNDQCPCPR 135
+ + +
Sbjct: 60 DWYRKRGIEIRLAEEAKL 77
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 30.0 bits (66), Expect = 0.28
Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 58 VIIGGGVGGSVVANRLS-ENPKWKVLLLESGED 89
IIG G G V A L E +V L E
Sbjct: 8 AIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 40
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 29.8 bits (65), Expect = 0.30
Identities = 7/32 (21%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 58 VIIGGGVGGSVVANRLSE-NPKWKVLLLESGE 88
+++G GG L +P ++ E G+
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase
subunit F (AhpF), C-terminal domains {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 29.3 bits (64), Expect = 0.31
Identities = 13/115 (11%), Positives = 28/115 (24%), Gaps = 1/115 (0%)
Query: 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKL 114
YD +I+G G G+ A + + L+ I + + + +
Sbjct: 2 YDVLIVGSGPAGAAAAIYSARK-GIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAG 60
Query: 115 EKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNKGW 169
+ D + L+ + G + A
Sbjct: 61 ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKL 115
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 29.0 bits (63), Expect = 0.51
Identities = 10/77 (12%), Positives = 22/77 (28%)
Query: 58 VIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLEKN 117
++G G A+ L+ + + E E + + N+ +L K+
Sbjct: 8 ALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKD 67
Query: 118 EEHPQCLGMYNDQCPCP 134
G +
Sbjct: 68 LGVKIICGKSLSENEIT 84
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 28.6 bits (63), Expect = 0.65
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 7/66 (10%)
Query: 55 YDFVIIGGGVGG---SVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWG 111
+I+G G G +V A R + +L+ E T + ++ + G
Sbjct: 6 SKLLILGSGPAGYTAAVYAARA----NLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTG 61
Query: 112 YKLEKN 117
L +
Sbjct: 62 PLLMER 67
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 132
Score = 27.6 bits (60), Expect = 0.86
Identities = 19/114 (16%), Positives = 34/114 (29%), Gaps = 12/114 (10%)
Query: 58 VIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLEKN 117
+I G G G +A LSE ++L++ +D + + A + +
Sbjct: 4 IIAGIGRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAG 62
Query: 118 EEHPQCLGMYND-----QCPCPRGKGLGGSSILNYMIYTRGNKKDY-DTYEAAG 165
E K G R ++ +Y D +E G
Sbjct: 63 IEDADMYIAVTGKEEVNLMSSLLAKSYG-----INKTIARISEIEYKDVFERLG 111
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 192
Score = 28.0 bits (61), Expect = 1.0
Identities = 11/78 (14%), Positives = 19/78 (24%), Gaps = 5/78 (6%)
Query: 55 YDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKL 114
I+G G A + + K LL E +I + T
Sbjct: 6 TRLCIVGSGPAAHTAAIYAARA-ELKPLLFEGWMANDIAPGG----QLTTTTDVENFPGF 60
Query: 115 EKNEEHPQCLGMYNDQCP 132
+ + + Q
Sbjct: 61 PEGILGVELTDKFRKQSE 78
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId:
1423]}
Length = 134
Score = 27.6 bits (60), Expect = 1.1
Identities = 6/20 (30%), Positives = 8/20 (40%)
Query: 57 FVIIGGGVGGSVVANRLSEN 76
F +IG G G + L
Sbjct: 3 FAVIGLGRFGGSIVKELHRM 22
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 27.6 bits (60), Expect = 1.4
Identities = 9/75 (12%), Positives = 20/75 (26%), Gaps = 10/75 (13%)
Query: 59 IIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLEKNE 118
++G G G + L + G + + +P +L + E
Sbjct: 5 VLGCGALGQLWLTALCKQ----------GHEVQGWLRVPQPYCSVNLVETDGSIFNESLT 54
Query: 119 EHPQCLGMYNDQCPC 133
+ +D
Sbjct: 55 ANDPDFLATSDLLLV 69
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 27.3 bits (60), Expect = 2.1
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLE 85
+ Y +I+G G G+ A L++ +V LL
Sbjct: 1 AAYQVLIVGAGFSGAETAFWLAQK-GVRVGLLT 32
>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter
jejuni [TaxId: 197]}
Length = 193
Score = 26.8 bits (58), Expect = 2.4
Identities = 14/109 (12%), Positives = 32/109 (29%), Gaps = 5/109 (4%)
Query: 58 VIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKL--- 114
I G G V + + + L+ + + +P F ++ + K+
Sbjct: 6 YIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDFFIAIGNNEIRKKIYQK 65
Query: 115 --EKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTY 161
E + + P + G I+ Y++ K +
Sbjct: 66 ISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVI 114
>d2baaa_ d.2.1.1 (A:) Plant class II chitinase {Barley (Hordeum
vulgare) [TaxId: 4513]}
Length = 243
Score = 26.9 bits (59), Expect = 2.6
Identities = 20/119 (16%), Positives = 38/119 (31%), Gaps = 19/119 (15%)
Query: 86 SGEDENIYTNI-PLLAHFNSLT----------HFNWGYKLEKNEEHPQCLGMYNDQCPCP 134
+G + + LA + T F WGY ++ + Q PC
Sbjct: 47 TGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCA 106
Query: 135 RGKGLGGSSIL------NYMIYTRGNKKDY--DTYEAAGNKGWGYDSVLKYFLKSENNT 185
GK G + NY R D + A + G+ + + +++ ++
Sbjct: 107 PGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPK 165
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 26.1 bits (57), Expect = 3.3
Identities = 9/55 (16%), Positives = 20/55 (36%)
Query: 58 VIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGY 112
V++G G GS A +++ + ++ + + L + T Y
Sbjct: 9 VLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY 63
>d1vg0a1 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 491
Score = 26.6 bits (58), Expect = 3.9
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 53 SEYDFVIIGGGVGGSVVANRLSENPKWKVLLLESGEDENIY 93
S++D ++IG G+ S++A S + + +VL + D Y
Sbjct: 5 SDFDVIVIGTGLPESIIAAACSRSGQ-RVLHV----DSRSY 40
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel
Kch {Escherichia coli [TaxId: 562]}
Length = 153
Score = 25.6 bits (55), Expect = 5.0
Identities = 3/20 (15%), Positives = 9/20 (45%)
Query: 57 FVIIGGGVGGSVVANRLSEN 76
F++ G + +L++
Sbjct: 6 FIVCGHSILAINTILQLNQR 25
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase
{Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Length = 189
Score = 25.6 bits (55), Expect = 5.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 58 VIIGGGVGGSVVANRLSEN 76
V+ G G G+ +A LS+
Sbjct: 11 VVFGSGAFGTALAMVLSKK 29
>d2ffea1 c.143.1.1 (A:1-309) LPPG:FO 2-phospho-L-lactate
transferase CofD {Methanosarcina mazei [TaxId: 2209]}
Length = 309
Score = 25.7 bits (56), Expect = 6.2
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 58 VIIGGGVGGSVVANRLSE 75
+I GG G + + L E
Sbjct: 2 IIFSGGTGTPKLLDGLKE 19
>d2hzba1 c.143.1.1 (A:2-312) Hypothetical protein BH3568 {Bacillus
halodurans [TaxId: 86665]}
Length = 311
Score = 25.8 bits (56), Expect = 6.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 58 VIIGGGVGGSVVANRLSENPK 78
V+ GGG G SV+ L P
Sbjct: 6 VVFGGGTGLSVLLRGLKTFPV 26
>d1dxja_ d.2.1.1 (A:) Plant class II chitinase {Jack bean (Canavalia
ensiformis) [TaxId: 3823]}
Length = 242
Score = 25.7 bits (56), Expect = 6.7
Identities = 16/84 (19%), Positives = 26/84 (30%), Gaps = 9/84 (10%)
Query: 108 FNWGYKLEKNEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYDTYEAAGNK 167
+ + E + + PCP GK G + + N Y AG +
Sbjct: 78 GPYAWGYCFVTERDKSNKYCDPGTPCPAGKSYYGRGPI--QLTHNYN------YAQAG-R 128
Query: 168 GWGYDSVLKYFLKSENNTSEFLDA 191
G D + L + + F A
Sbjct: 129 ALGVDLINNPDLVARDAVISFKTA 152
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice
blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 182
Score = 25.4 bits (54), Expect = 7.3
Identities = 8/103 (7%), Positives = 26/103 (25%), Gaps = 1/103 (0%)
Query: 58 VIIGGGVGGSVVANRLSENP-KWKVLLLESGEDENIYTNIPLLAHFNSLTHFNWGYKLEK 116
+++G G + L+++ K V + + + + + + E
Sbjct: 6 LMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV 65
Query: 117 NEEHPQCLGMYNDQCPCPRGKGLGGSSILNYMIYTRGNKKDYD 159
+ + + + Y + D
Sbjct: 66 AKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELD 108
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.136 0.411
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,054,962
Number of extensions: 48898
Number of successful extensions: 227
Number of sequences better than 10.0: 1
Number of HSP's gapped: 215
Number of HSP's successfully gapped: 85
Length of query: 284
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 200
Effective length of database: 1,254,276
Effective search space: 250855200
Effective search space used: 250855200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)