BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4122
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A3KMH1|VWA8_HUMAN von Willebrand factor A domain-containing protein 8 OS=Homo sapiens
GN=VWA8 PE=1 SV=2
Length = 1905
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 116/139 (83%)
Query: 23 TDALTQDWLSHLRWILQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTT 82
+D+L Q + HLRWI+QKD + QDVFLIG PG LRRS+AM YLELT+REVEYI LSRDTT
Sbjct: 82 SDSLAQSVVQHLRWIMQKDLLGQDVFLIGPPGPLRRSIAMQYLELTKREVEYIALSRDTT 141
Query: 83 EADIKQRREIVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENREMHLE 142
E D+KQRREI GTA Y DQ AVRAA EGR LILEG+EKAERNVLPVLNNLLENREM LE
Sbjct: 142 ETDLKQRREIRAGTAFYIDQCAVRAATEGRTLILEGLEKAERNVLPVLNNLLENREMQLE 201
Query: 143 DGRFLVSASTYDKLLQVET 161
DGRFL+SA YDKLL+ T
Sbjct: 202 DGRFLMSAERYDKLLRDHT 220
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%)
Query: 43 MSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIKQRREIVNGTAIYYDQ 102
+ + + L+G G + + +L L R EYI L RDTT + + + +G +Y D
Sbjct: 773 LGEHLLLVGNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTLTLQPSVKDGLIVYEDS 832
Query: 103 SAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENREMHLEDGRFLVSAST 152
V+A G +L+++ +KA NV +L L+EN EM L DGR +V+ S
Sbjct: 833 PLVKAVKLGHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSA 882
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Query: 31 LSH--LRWILQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADI-K 87
LSH L+ + + +M +D+ LIG G + +A ++ + +E I L +D T D+ +
Sbjct: 425 LSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTARDLLQ 484
Query: 88 QRREIVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENREMHLEDGRFL 147
QR + NG + V AA+EG++++L+GI + L VL L+ +RE+ L DG L
Sbjct: 485 QRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYDGSRL 544
Query: 148 VSASTYDKL 156
+ Y +L
Sbjct: 545 LREDRYMRL 553
>sp|B0R0T1|VWA8_DANRE von Willebrand factor A domain-containing protein 8 OS=Danio rerio
GN=si:dkey-18l1.1 PE=4 SV=1
Length = 1896
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/138 (74%), Positives = 116/138 (84%)
Query: 24 DALTQDWLSHLRWILQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTE 83
+AL Q HLRWI+QKD + QDVFLIG PG LRRS+AM YLELT+REVEY+ LSRDTTE
Sbjct: 75 EALPQMVTQHLRWIMQKDLLGQDVFLIGPPGPLRRSIAMQYLELTKREVEYVALSRDTTE 134
Query: 84 ADIKQRREIVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENREMHLED 143
D+KQRREI +GTA Y DQ AVRAA EGR+L+LEG+EKAERNVLPVLNNLLENREM LED
Sbjct: 135 TDLKQRREIRSGTAFYIDQCAVRAATEGRILVLEGLEKAERNVLPVLNNLLENREMQLED 194
Query: 144 GRFLVSASTYDKLLQVET 161
GRFL+SA YDKLL+ T
Sbjct: 195 GRFLMSAHRYDKLLEEHT 212
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%)
Query: 43 MSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIKQRREIVNGTAIYYDQ 102
+ + + L+G G + + +L L R EY+ L RDTT + + + +G IY D
Sbjct: 764 LGEHLLLVGNQGVGKNKIVDRFLHLMNRPREYLQLHRDTTVQTLTLQPSVRDGIIIYEDS 823
Query: 103 SAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENREMHLEDGRFLVS 149
V+A G +L+++ +KA NV +L L+E+ EM L DGR +VS
Sbjct: 824 PLVKAVKMGHILVIDEADKAPTNVTCILKALVESGEMILADGRRIVS 870
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 38 LQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADI-KQRREIVNGT 96
+ + ++ +D+ LIG G + +A + E+ +E + L +D T D+ +QR + NG
Sbjct: 426 MMQSHLVKDICLIGAKGCGKSVIAREFAEMLGYSIEPVMLYQDMTARDLLQQRYTLPNGD 485
Query: 97 AIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENREMHLEDGRFLVSASTYDKL 156
+ V AA EG++++L+GI + L VL+ LL +RE+ L DG L+ Y L
Sbjct: 486 TAWRASPLVTAAQEGKLVLLDGIHRVNLGTLAVLSRLLHDRELDLYDGTRLLRFDRYQAL 545
>sp|Q8CC88|VWA8_MOUSE von Willebrand factor A domain-containing protein 8 OS=Mus musculus
GN=Vwa8 PE=2 SV=2
Length = 1905
Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 115/139 (82%)
Query: 23 TDALTQDWLSHLRWILQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTT 82
+D+ Q + HLRW++QKD + QDVFLIG PG LRRS+AM YLELT+REVEYI LSRDTT
Sbjct: 81 SDSPAQSIVQHLRWLMQKDLLGQDVFLIGPPGPLRRSVAMQYLELTKREVEYIALSRDTT 140
Query: 83 EADIKQRREIVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENREMHLE 142
E D+KQRREI GTA Y DQ AVRAA EGR L+LEG+EKAERNVLPVLNNLLENREM LE
Sbjct: 141 ETDLKQRREIRAGTAFYIDQCAVRAATEGRTLVLEGLEKAERNVLPVLNNLLENREMQLE 200
Query: 143 DGRFLVSASTYDKLLQVET 161
DGRFL+SA YDKLLQ T
Sbjct: 201 DGRFLMSAERYDKLLQDHT 219
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 43 MSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIKQRREIVNGTAIYYDQ 102
+ + + L+G G + + +L L R EYI L RDTT + + + G +Y D
Sbjct: 772 LGEHLLLVGNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQSLTLQPTVKGGLIVYEDS 831
Query: 103 SAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENREMHLEDGRFLVS 149
V+A G +L+++ +KA NV +L L+EN EM L DGR +V+
Sbjct: 832 PLVKAVKLGHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVA 878
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 40 KDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADI-KQRREIVNGTAI 98
+ +M +D+ LIG G + +A ++ L +E I L +D T D+ +QR + NG
Sbjct: 435 QSHMVKDICLIGGKGCGKTVIAKNFAALLGYSIEPIMLYQDMTARDLLQQRYTLPNGDTA 494
Query: 99 YYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENREMHLEDGRFLVSASTY 153
+ V AA EG++++L+GI + L VL L+ +RE+ L DG L+ Y
Sbjct: 495 WRSSPLVSAAREGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYDGSRLLREDRY 549
>sp|Q2FH29|Y1302_STAA3 Uncharacterized protein SAUSA300_1302 OS=Staphylococcus aureus
(strain USA300) GN=SAUSA300_1302 PE=3 SV=1
Length = 263
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 42 NMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRD----------TTEADIKQRRE 91
++++++ L G GS + LA + E+ + + S D T + + + ++E
Sbjct: 22 DLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDTESLLGFKTIKTNAEGQQE 81
Query: 92 IVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENR 137
IV + D ++A EG +L ++ I A+ LPVLN +L+ R
Sbjct: 82 IV-----FVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYR 122
>sp|Q5HG10|Y1445_STAAC Uncharacterized protein SACOL1445 OS=Staphylococcus aureus (strain
COL) GN=SACOL1445 PE=3 SV=1
Length = 263
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 42 NMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRD----------TTEADIKQRRE 91
++++++ L G GS + LA + E+ + + S D T + + + ++E
Sbjct: 22 DLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDTESLLGFKTIKTNAEGQQE 81
Query: 92 IVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENR 137
IV + D ++A EG +L ++ I A+ LPVLN +L+ R
Sbjct: 82 IV-----FVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYR 122
>sp|Q6GGZ9|Y1421_STAAR Uncharacterized protein SAR1421 OS=Staphylococcus aureus (strain
MRSA252) GN=SAR1421 PE=3 SV=1
Length = 263
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 42 NMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRD----------TTEADIKQRRE 91
++++++ L G GS + LA + E+ + + S D T + + + ++E
Sbjct: 22 DLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDTESLLGFKTIKTNAEGQQE 81
Query: 92 IVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENR 137
IV + D ++A EG +L ++ I A+ LPVLN +L+ R
Sbjct: 82 IV-----FVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYR 122
>sp|Q2G2J8|Y1413_STAA8 Uncharacterized protein SAOUHSC_01413 OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_01413 PE=3 SV=1
Length = 263
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 42 NMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRD----------TTEADIKQRRE 91
++++++ L G GS + LA + E+ + + S D T + + + ++E
Sbjct: 22 DLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDTESLLGFKTIKTNAEGQQE 81
Query: 92 IVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENR 137
IV + D ++A EG +L ++ I A+ LPVLN +L+ R
Sbjct: 82 IV-----FVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYR 122
>sp|Q99U78|Y1409_STAAM Uncharacterized protein SAV1409 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV1409 PE=1 SV=1
Length = 263
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 42 NMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRD----------TTEADIKQRRE 91
++++++ L G GS + LA + E+ + + S D T + + + ++E
Sbjct: 22 DLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDTESLLGFKTIKTNAEGQQE 81
Query: 92 IVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENR 137
IV + D ++A EG +L ++ I A+ LPVLN +L+ R
Sbjct: 82 IV-----FVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYR 122
>sp|Q6G9F2|Y1352_STAAS Uncharacterized protein SAS1352 OS=Staphylococcus aureus (strain
MSSA476) GN=SAS1352 PE=3 SV=1
Length = 263
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 42 NMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRD----------TTEADIKQRRE 91
++++++ L G GS + LA + E+ + + S D T + + + ++E
Sbjct: 22 DLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDTESLLGFKTIKTNAEGQQE 81
Query: 92 IVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENR 137
IV + D ++A EG +L ++ I A+ LPVLN +L+ R
Sbjct: 82 IV-----FVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYR 122
>sp|Q7A0W8|Y1299_STAAW Uncharacterized protein MW1299 OS=Staphylococcus aureus (strain
MW2) GN=MW1299 PE=3 SV=1
Length = 263
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 42 NMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRD----------TTEADIKQRRE 91
++++++ L G GS + LA + E+ + + S D T + + + ++E
Sbjct: 22 DLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDTESLLGFKTIKTNAEGQQE 81
Query: 92 IVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENR 137
IV + D ++A EG +L ++ I A+ LPVLN +L+ R
Sbjct: 82 IV-----FVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYR 122
>sp|Q7A5N7|Y1241_STAAN Uncharacterized protein SA1241 OS=Staphylococcus aureus (strain
N315) GN=SA1241 PE=3 SV=1
Length = 263
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 42 NMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRD----------TTEADIKQRRE 91
++++++ L G GS + LA + E+ + + S D T + + + ++E
Sbjct: 22 DLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDTESLLGFKTIKTNAEGQQE 81
Query: 92 IVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENR 137
IV + D ++A EG +L ++ I A+ LPVLN +L+ R
Sbjct: 82 IV-----FVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYR 122
>sp|Q2YY09|Y1265_STAAB Uncharacterized protein SAB1265c OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=SAB1265c PE=3 SV=1
Length = 263
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 42 NMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRD----------TTEADIKQRRE 91
++++++ L G GS + LA + E+ + + S D T + + + ++E
Sbjct: 22 DLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDTESLLGFKTIKTNAEGQQE 81
Query: 92 IVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENR 137
IV + D ++A EG +L ++ I A+ LPVLN +L+ R
Sbjct: 82 IV-----FLDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYR 122
>sp|Q49XL1|Y1341_STAS1 Uncharacterized protein SSP1341 OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1341 PE=3 SV=2
Length = 263
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 43 MSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIKQRREIV---NGTA-- 97
+++++ L G GS + LA + E R + I S D + + I NG+
Sbjct: 23 LNKNILLKGPTGSGKTKLAETLSETMNRPMHQINCSVDLDAESLLGFKTIQTNENGSQEI 82
Query: 98 IYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENR 137
++ D ++A EG +L ++ I A+ LP+LN +L+ R
Sbjct: 83 VFIDGPVIKAMKEGHILYIDEINMAKPETLPILNGVLDYR 122
>sp|Q6KI22|LON_MYCMO Lon protease OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC
11711) GN=lon PE=3 SV=1
Length = 833
Score = 36.6 bits (83), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 19 FSVNTDALTQDWLSHLRWILQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLS 78
+ +N + T+ S + + N + L+G PG+ + SLA + E R+ I L
Sbjct: 358 YEINKNLFTKKNASDDTYSYKSSNNVPILALVGPPGTGKTSLAKAIAETLDRKFIKISLG 417
Query: 79 RDTTEADIK-QRREIVNGTAIYYDQSAVRAAIEGRVLILEGIEK 121
EA+I+ RR V Q+ +A + V++L+ I+K
Sbjct: 418 GVKDEAEIRGHRRTYVGALPGKIIQAIKKAGVSNPVILLDEIDK 461
>sp|Q4L6B6|Y1500_STAHJ Uncharacterized protein SH1500 OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1500 PE=3 SV=1
Length = 263
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 42 NMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRD----------TTEADIKQRRE 91
N+++++ L G GS + LA + + + S D T + + + ++E
Sbjct: 22 NLNKNILLKGPTGSGKTKLAETLSAAVNTPMHQVNCSVDLDAESLLGFKTIKTNEQGQQE 81
Query: 92 IVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENR 137
IV + D ++A EG +L ++ I A+ LP+LN +L+ R
Sbjct: 82 IV-----FIDGPVIKAMREGHILYIDEINMAKPETLPILNGVLDYR 122
>sp|Q6BJJ8|LONP2_DEBHA Lon protease homolog 2, peroxisomal OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DEHA2G01892g PE=3 SV=2
Length = 1147
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 37 ILQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNG 95
++ K+N S + L+G PG+ + SLA S + R + + L E++I+ RR V
Sbjct: 637 MVSKNNKSPIIMLVGPPGTGKTSLAKSIAKSLGRNFQRVSLGGIKDESEIRGHRRTYVGA 696
Query: 96 TAIYYDQSAVRAAIEGRVLILEGIEK 121
QS ++ V++L+ I+K
Sbjct: 697 MPGVIIQSLRKSRSMNPVILLDEIDK 722
>sp|Q12019|MDN1_YEAST Midasin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MDN1 PE=1 SV=1
Length = 4910
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 27 TQDWLSHLRWILQKDNMSQDVFLIGKPGSLRRSL--AMSYLELTQREVEYICLSRDTTEA 84
T +S LR + +K S + LIGK GS + L +S + I L T
Sbjct: 291 THKTVSSLRQLGRKIQNSTPIMLIGKAGSGKTFLINELSKYMGCHDSIVKIHLGEQT--- 347
Query: 85 DIKQRREIVNGTAIYYDQSAV---RAAI------EGRVLILEGIEKAERNVLPVLNNLLE 135
D K ++ GT D+ RA + EGR +++E I+KA +VL +L +LLE
Sbjct: 348 DAK----LLIGTYTSGDKPGTFEWRAGVLATAVKEGRWVLIEDIDKAPTDVLSILLSLLE 403
Query: 136 NREM 139
RE+
Sbjct: 404 KREL 407
>sp|O31850|YOJN_BACSU Uncharacterized protein YojN OS=Bacillus subtilis (strain 168)
GN=yojN PE=3 SV=1
Length = 304
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 43 MSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIKQRREIVN----GTAI 98
M ++V L G GS + LA + + + + S D + + I N T
Sbjct: 64 MGKNVLLKGPTGSGKTKLAETLSSYFHKPMHSVNCSVDLDAEALVGYKTIENQSGQATIE 123
Query: 99 YYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENREM 139
+ +A EG L ++ I A+ LP+LN +L+ R+M
Sbjct: 124 FVSGPVTKAMKEGHFLYIDEINMAKPETLPILNGVLDYRKM 164
>sp|Q5HPD3|Y979_STAEQ Uncharacterized protein SERP0979 OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP0979 PE=3 SV=1
Length = 263
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 15/105 (14%)
Query: 43 MSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRD----------TTEADIKQRREI 92
+++++ L G GS + LA + + + + S D T + + + +EI
Sbjct: 23 LNKNILLKGPTGSGKTKLAETLSHVMNLPMHQVNCSVDLDTESLLGFKTIQTNEEGHQEI 82
Query: 93 VNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENR 137
V + D ++A EG +L ++ I A+ LP+LN +L+ R
Sbjct: 83 V-----FIDGPVIKAMKEGHILYIDEINMAKPETLPILNGVLDYR 122
>sp|P23925|DGAL_CITFR D-galactose-binding periplasmic protein OS=Citrobacter freundii
GN=mglB PE=3 SV=1
Length = 332
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 21 VNTDALTQDWLSHLRWILQKDNMSQDVFLIGKPGSLRRSLAMSYL--ELTQREVEYICLS 78
+ D + + W ++ W L KD Q V L G+PG +Y+ EL + ++ L
Sbjct: 141 IQGDLIAKHWAANPNWDLNKDGKIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQ 200
Query: 79 RDTTEADIKQRRE 91
DT D Q ++
Sbjct: 201 LDTAMWDTAQAKD 213
>sp|Q8CP85|Y1092_STAES Uncharacterized protein SE_1092 OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_1092 PE=3 SV=1
Length = 263
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 15/105 (14%)
Query: 43 MSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRD----------TTEADIKQRREI 92
+++++ L G GS + LA + + + + + S D T + + +EI
Sbjct: 23 LNKNILLKGPTGSGKTKLAETLSNVMKLPMHQVNCSVDLDTESLLGFKTIHTNEEGHQEI 82
Query: 93 VNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENR 137
V + D ++A EG +L ++ I A+ LP+LN +L+ R
Sbjct: 83 V-----FIDGPVIKAMKEGHILYIDEINMAKPETLPILNGVLDYR 122
>sp|P23905|DGAL_SALTY D-galactose-binding periplasmic protein OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=mglB PE=1 SV=2
Length = 332
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 21 VNTDALTQDWLSHLRWILQKDNMSQDVFLIGKPGSLRRSLAMSYL--ELTQREVEYICLS 78
+ D + + W ++ W L KD Q V L G+PG +Y+ EL + ++ L+
Sbjct: 141 IQGDLIAKHWQANQGWDLNKDGKIQYVLLKGEPGHPDAEARTTYVVKELNDKGIQTEQLA 200
Query: 79 RDTTEADIKQRRE 91
DT D Q ++
Sbjct: 201 LDTAMWDTAQAKD 213
>sp|P0AEE7|DGAL_SHIFL D-galactose-binding periplasmic protein OS=Shigella flexneri
GN=mglB PE=3 SV=1
Length = 332
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 21 VNTDALTQDWLSHLRWILQKDNMSQDVFLIGKPGSLRRSLAMSYL--ELTQREVEYICLS 78
+ D + + W ++ W L KD Q V L G+PG +Y+ EL + ++ L
Sbjct: 141 IQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQ 200
Query: 79 RDTTEADIKQRRE 91
DT D Q ++
Sbjct: 201 LDTAMWDTAQAKD 213
>sp|P0AEE5|DGAL_ECOLI D-galactose-binding periplasmic protein OS=Escherichia coli (strain
K12) GN=mglB PE=1 SV=1
Length = 332
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 21 VNTDALTQDWLSHLRWILQKDNMSQDVFLIGKPGSLRRSLAMSYL--ELTQREVEYICLS 78
+ D + + W ++ W L KD Q V L G+PG +Y+ EL + ++ L
Sbjct: 141 IQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQ 200
Query: 79 RDTTEADIKQRRE 91
DT D Q ++
Sbjct: 201 LDTAMWDTAQAKD 213
>sp|P0AEE6|DGAL_ECOL6 D-galactose-binding periplasmic protein OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=mglB PE=3 SV=1
Length = 332
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 21 VNTDALTQDWLSHLRWILQKDNMSQDVFLIGKPGSLRRSLAMSYL--ELTQREVEYICLS 78
+ D + + W ++ W L KD Q V L G+PG +Y+ EL + ++ L
Sbjct: 141 IQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQ 200
Query: 79 RDTTEADIKQRRE 91
DT D Q ++
Sbjct: 201 LDTAMWDTAQAKD 213
>sp|P36774|LON2_MYXXA Lon protease 2 OS=Myxococcus xanthus GN=lon2 PE=1 SV=3
Length = 827
Score = 33.1 bits (74), Expect = 0.74, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 38 LQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGT 96
L+ D + L+G PG + SL S + T R+ + L EA+I+ RR V
Sbjct: 366 LKNDMRGPILCLVGPPGVGKTSLGQSVAKATGRKFVRLSLGGVRDEAEIRGHRRTYVGAL 425
Query: 97 AIYYDQSAVRAAIEGRVLILEGIEK 121
+ QS +A + V++L+ I+K
Sbjct: 426 PGRFIQSMKKAGTKNPVMMLDEIDK 450
>sp|P57549|LON_BUCAI Lon protease OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
(strain APS) GN=lon PE=3 SV=1
Length = 777
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 49 LIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGTAIYYDQSAVRA 107
LIG PG + SL S T R+ I L EA+I+ RR + Q +A
Sbjct: 354 LIGPPGVGKTSLGKSIARSTGRKYVRIALGGIRDEAEIRGHRRTYIGSMPGKLIQKMAKA 413
Query: 108 AIEGRVLILEGIEKAERNV 126
++ + +L+ I+K R++
Sbjct: 414 KVKNPLFLLDEIDKMSRDI 432
>sp|A5FG89|LON_FLAJ1 Lon protease OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM
2064 / UW101) GN=lon PE=3 SV=1
Length = 817
Score = 33.1 bits (74), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 24 DALTQDWLSHLRWI-LQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTT 82
D + + + HL + L+ D S + L G PG + S+ S E RE I L
Sbjct: 362 DEVKKRMIEHLAVLKLRNDMKSPIICLTGPPGVGKTSIGRSVAEALGREYVRISLGGLRD 421
Query: 83 EADIK-QRREIVNGTAIYYDQSAVRAAIEGRVLILEGIEK 121
EA+I+ R+ + QS +A V IL+ I+K
Sbjct: 422 EAEIRGHRKTYIGAMPGRIIQSLKKAGTSNPVFILDEIDK 461
>sp|B2RII6|LON_PORG3 Lon protease OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM
20709 / JCM 12257) GN=lon PE=3 SV=1
Length = 845
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Query: 31 LSHLRWILQKDNMSQDVF-LIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-Q 88
+ HL + K +M + L G PG + SL S E R+ I L EA+I+
Sbjct: 372 IEHLAVLKMKGDMKSPIICLYGPPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGH 431
Query: 89 RREIVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERN 125
RR + QS RA V +L+ I+K + +
Sbjct: 432 RRTYIGAMCGRIIQSLQRAGTSNPVFVLDEIDKIDSD 468
>sp|Q6CWS4|LONP2_KLULA Lon protease homolog 2, peroxisomal OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=KLLA0B01892g PE=3 SV=1
Length = 1003
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Query: 9 EYVRFTLIYLFSVNTDALTQDWLSHLRWILQKDNMSQDVFLIGKPGSLRRSLAMSYLELT 68
EY+ I S N L D H + N + L+G PG + S+A S ++
Sbjct: 480 EYLSVLKISEISTNDPNLNTDL--HPKKDRASINKPPILLLVGPPGVGKTSIAKSVADVL 537
Query: 69 QREVEYICLSRDTTEADIKQRREIVNGTAIYYDQSAVRAAIEGRVLIL 116
R+ + I L EA+I+ R G+ A+R A LIL
Sbjct: 538 GRKFQRISLGGIHNEAEIRGHRRTYVGSMCGLIIGALRKAGTMNPLIL 585
>sp|A5EWF3|LON_DICNV Lon protease OS=Dichelobacter nodosus (strain VCS1703A) GN=lon PE=3
SV=1
Length = 805
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 47 VFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGTAIYYDQSAV 105
+ LIG PG + SL S E T R+ + I L EA+I+ RR + Q
Sbjct: 357 ICLIGPPGVGKTSLGKSIAEATGRDFDRIALGGLHDEAEIRGHRRTYIGALPGKIVQKLC 416
Query: 106 RAAIEGRVLILEGIEK 121
+ V++L+ I+K
Sbjct: 417 KLGSNNPVILLDEIDK 432
>sp|Q869L3|MDN1_DICDI Midasin OS=Dictyostelium discoideum GN=mdn1 PE=3 SV=2
Length = 5900
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 105 VRAAIEGRVLILEGIEKAERNVLPVLNNLLENREMHLEDGRFLVSASTYDKLLQVETL 162
+A EGR +++E I+ A VL VL LLENR + + ++ AS +L +TL
Sbjct: 359 TQAVQEGRWILIEDIDLAPIEVLSVLIPLLENRTLFIPGRGEVIEASNGFQLFATQTL 416
>sp|A2EK80|SEY12_TRIVA Protein SEY1 homolog 2 OS=Trichomonas vaginalis GN=TVAG_100140 PE=3
SV=1
Length = 792
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 50 IGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIKQRREIVNGTAIYYDQSAVRAAI 109
I P S + + E + ++ + RD +AD+ R+ N + + + A
Sbjct: 188 INLPDSFKGKQMEDFFEFLYFPIHHMVIQRDQFDADVNTLRKWFNEPPL---KDYLFAEK 244
Query: 110 EGRVLILEGIEKAERNVLPVLNNLLENREMHLEDGRFLVS 149
+V+ EG+ + RN+ V+N EN+E+++ R +++
Sbjct: 245 STKVVPGEGLSQYIRNLWEVIN---ENKELNIPSQRTMLA 281
>sp|A9GBF1|LON2_SORC5 Lon protease 2 OS=Sorangium cellulosum (strain So ce56) GN=lon2
PE=3 SV=1
Length = 804
Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 38 LQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGT 96
L+ D + IG PG + SL S R E I L EA+I+ RR V
Sbjct: 354 LRTDKKGPILLFIGPPGVGKTSLGKSIARSMGRRYERIALGGVRDEAEIRGHRRTYVGAL 413
Query: 97 AIYYDQSAVRAAIEGRVLILEGIEK 121
Q+ +A + VL+L+ ++K
Sbjct: 414 PGRILQALKKAGTKNPVLVLDEVDK 438
>sp|B9WEC4|LONP2_CANDC Lon protease homolog 2, peroxisomal OS=Candida dubliniensis (strain
CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL
Y-17841) GN=CD36_85340 PE=3 SV=1
Length = 1247
Score = 31.2 bits (69), Expect = 2.8, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 38 LQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGT 96
+ K+N S + L G PG+ + SLA S R + I L E++I+ RR V
Sbjct: 708 VSKNNKSPIIMLAGPPGTGKTSLAKSIASALGRNFQRISLGGIKDESEIRGHRRTYVGAM 767
Query: 97 AIYYDQSAVRAAIEGRVLILEGIEK 121
Q+ ++ V++L+ I+K
Sbjct: 768 PGLLIQALRKSRCMNPVILLDEIDK 792
>sp|B7GXS7|LON_ACIB3 Lon protease OS=Acinetobacter baumannii (strain AB307-0294) GN=lon
PE=3 SV=1
Length = 809
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 49 LIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGTAIYYDQSAVRA 107
L+G PG + SL S + T RE + L EA+I+ RR + QS +
Sbjct: 367 LVGPPGVGKTSLGESVAKATGREFVRMALGGVRDEAEIRGHRRTYIGAMPGKIVQSLTKV 426
Query: 108 AIEGRVLILEGIEK 121
++ + +L+ I+K
Sbjct: 427 GVKNPLFLLDEIDK 440
>sp|Q59YV0|LONP2_CANAL Lon protease homolog 2, peroxisomal OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=CaO19.6973 PE=3 SV=1
Length = 1258
Score = 31.2 bits (69), Expect = 3.0, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 38 LQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGT 96
+ K+N S + L G PG+ + SLA S R + I L E++I+ RR V
Sbjct: 715 VSKNNKSPIIMLAGPPGTGKTSLAKSIASALGRNFQRISLGGIKDESEIRGHRRTYVGAM 774
Query: 97 AIYYDQSAVRAAIEGRVLILEGIEK 121
Q+ ++ V++L+ I+K
Sbjct: 775 PGLLIQALRKSRCMNPVILLDEIDK 799
>sp|B3PN08|LON_MYCA5 Lon protease OS=Mycoplasma arthritidis (strain 158L3-1) GN=lon PE=3
SV=1
Length = 835
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 49 LIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGTAIYYDQSAVRA 107
LIG PG+ + +LA S E R+ I L E++I+ RR V +A
Sbjct: 410 LIGPPGTGKTTLAKSIAEALGRQFVKISLGGVKDESEIRGHRRTYVGALPGKIISGIKKA 469
Query: 108 AIEGRVLILEGIEK 121
+ V++L+ I+K
Sbjct: 470 GVSNPVILLDEIDK 483
>sp|Q2LVS9|LON_SYNAS Lon protease OS=Syntrophus aciditrophicus (strain SB) GN=lon PE=3
SV=1
Length = 790
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 14/86 (16%)
Query: 38 LQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIKQRREIVNGTA 97
L+ D + +G PG+ + SLA S R+ I L EA+I+ R G
Sbjct: 359 LKPDTKGPILCFVGPPGTGKTSLAQSIARALGRKFYRISLGGVHDEAEIRGHRRTYVG-- 416
Query: 98 IYYDQSAVRAAIEGRVLILEGIEKAE 123
A+ GR I++GI +AE
Sbjct: 417 ----------ALPGR--IIQGIRRAE 430
>sp|Q755E4|LONP2_ASHGO Lon protease homolog 2, peroxisomal OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=AFL121W
PE=3 SV=2
Length = 1004
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 47 VFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGTAIYYDQSAV 105
+ L+G PG + S+A S ++ R + I L EA+I+ RR V A +
Sbjct: 515 LLLVGPPGVGKTSVAKSVADVLGRRFQRISLGGIHNEAEIRGHRRTYVGAMAGMIVNALC 574
Query: 106 RAAIEGRVLILEGIEK 121
+A +++L+ I+K
Sbjct: 575 KAGCMNPLILLDEIDK 590
>sp|A6LD45|LON_PARD8 Lon protease OS=Parabacteroides distasonis (strain ATCC 8503 / DSM
20701 / NCTC 11152) GN=lon PE=3 SV=1
Length = 823
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 38 LQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGT 96
L+ D S + L G PG + SL S E +R+ + L EA+I+ RR +
Sbjct: 384 LKGDMKSPIICLYGPPGVGKTSLGRSIAEALRRKYVRVSLGGLHDEAEIRGHRRTYIGAM 443
Query: 97 AIYYDQSAVRAAIEGRVLILEGIEK 121
Q+ +A V IL+ I+K
Sbjct: 444 CGRIIQNIQKAGTSNPVFILDEIDK 468
>sp|B8BDV1|LONP2_ORYSI Lon protease homolog 2, peroxisomal OS=Oryza sativa subsp. indica
GN=LON1 PE=2 SV=1
Length = 884
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 38 LQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGT 96
L+ D + +G PG + SLA S + R+ I L EADI+ RR +
Sbjct: 395 LKPDARGPVLCFVGPPGVGKTSLASSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSM 454
Query: 97 AIYYDQSAVRAAIEGRVLILEGIEKAERNV 126
R ++ V++L+ I+K +V
Sbjct: 455 PGRLIDGLKRVSVSNPVMLLDEIDKTGSDV 484
>sp|Q600B5|LON_MYCH2 Lon protease OS=Mycoplasma hyopneumoniae (strain 232) GN=lon PE=3
SV=1
Length = 870
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 49 LIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGTAIYYDQSAVRA 107
L+G PG+ + S+AM+ E +E I L EA+I+ RR V Q+ +
Sbjct: 452 LVGPPGTGKTSIAMAVAEAIGKEFVKISLGGIRDEAEIRGHRRTYVGALPGKIIQALKKV 511
Query: 108 AIEGRVLILEGIEK 121
+ +++L+ I+K
Sbjct: 512 GVSNPLILLDEIDK 525
>sp|Q0J032|LONP2_ORYSJ Lon protease homolog 2, peroxisomal OS=Oryza sativa subsp. japonica
GN=Os09g0533400 PE=2 SV=1
Length = 884
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 38 LQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGT 96
L+ D + +G PG + SLA S + R+ I L EADI+ RR +
Sbjct: 395 LKPDARGPVLCFVGPPGVGKTSLASSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSM 454
Query: 97 AIYYDQSAVRAAIEGRVLILEGIEKAERNV 126
R ++ V++L+ I+K +V
Sbjct: 455 PGRLIDGLKRVSVSNPVMLLDEIDKTGSDV 484
>sp|P93647|LONP2_MAIZE Lon protease homolog 2, peroxisomal OS=Zea mays GN=LON1 PE=2 SV=1
Length = 885
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 38 LQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGT 96
L+ D + +G PG + SLA S + R+ I L EADI+ RR +
Sbjct: 396 LKPDARGPVLCFVGPPGVGKTSLASSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSM 455
Query: 97 AIYYDQSAVRAAIEGRVLILEGIEKAERNV 126
R ++ V++L+ I+K +V
Sbjct: 456 PGRLIDGLKRVSVSNPVMLLDEIDKTGSDV 485
>sp|A6LSV5|LON_CLOB8 Lon protease OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB
8052) GN=lon PE=3 SV=1
Length = 795
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 31 LSHLRWI-LQKDNMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-Q 88
+ HL + L+ D + L+G PG + SL S E R+ + L EA+I+
Sbjct: 335 IQHLAVMQLKNDKKGSILLLVGPPGVGKTSLGKSIAEALNRKYVRLSLGGVRDEAEIRGH 394
Query: 89 RREIVNGTAIYYDQSAVRAAIEGRVLILEGIEK 121
RR V QS +A V++L+ ++K
Sbjct: 395 RRTYVGAMPGRIIQSIKKAGEINPVMVLDEVDK 427
>sp|Q9VCU9|DCR1_DROME Endoribonuclease Dcr-1 OS=Drosophila melanogaster GN=Dcr-1 PE=1
SV=1
Length = 2249
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 58 RSLAMSYLELTQREVEYICLSRDTTEAD 85
+S + ++LT R YIC + DTTEAD
Sbjct: 619 KSPTVGSVQLTDRSHRYICATGDTTEAD 646
>sp|Q6C0L7|LONP2_YARLI Lon protease homolog 2, peroxisomal OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=YALI0F23595g PE=3 SV=1
Length = 952
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 42 NMSQDVFLIGKPGSLRRSLAMSYLELTQREVEYICLSRDTTEADIK-QRREIVNGTAIYY 100
N + + L+G PG + SLA S R+ + + L E++I+ RR V +
Sbjct: 484 NRAPILLLVGPPGVGKTSLAKSVARALGRKFQRLSLGGVRDESEIRGHRRTYVGAMPGLF 543
Query: 101 DQSAVRAAIEGRVLILEGIEK 121
Q + + V++L+ I+K
Sbjct: 544 IQGLRQVGVNNPVVLLDEIDK 564
>sp|Q8PT12|SERC_METMA Phosphoserine aminotransferase OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=serC PE=3 SV=1
Length = 370
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Query: 20 SVNTDAL--TQDWLSHLRW---------ILQKDNMSQDVFLIGKPGSLRRSLAMSYLELT 68
++NT ++ +DWL+ L+W ++Q+ N + VF + ++ + +L T
Sbjct: 241 TINTPSMLANEDWLATLKWAESVGGLKQLIQRTNENLAVF----EAFVAKNNWIHFLAET 296
Query: 69 Q--REVEYICLSRDTTEADIKQRREIVNGTAIYYDQSAVRAAIEG-RVLILEGIEKAERN 125
+ R +C D +E +K+ +++ + YD + R A G R+ IEK +
Sbjct: 297 KEIRSSTSVCFKVDLSEEKLKELIKMLENEKVAYDIGSYRDAPSGLRIWCGATIEKEDLE 356
Query: 126 VL 127
L
Sbjct: 357 CL 358
>sp|Q9CSP9|TTC14_MOUSE Tetratricopeptide repeat protein 14 OS=Mus musculus GN=Ttc14 PE=2
SV=2
Length = 761
Score = 29.6 bits (65), Expect = 8.4, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 38 LQKDNMSQDVFLIGKPGSLRRSLAMSY-LELTQREVEYICLSR---------DTTEADIK 87
LQ N S+D F +LR+ + S+ L+ + V+Y + R E D +
Sbjct: 283 LQSKNFSEDDF----ASALRKKQSASWALKCVKIGVDYFKVGRHVDAMNEYNKALEIDKQ 338
Query: 88 QRREIVNGTAIYYDQSAVRAAIEGRVLILEGIEKAERNVLPVLNNLLENREMHLEDG-RF 146
+V A+Y + ++ AIE L LE RN L L R LE+ +F
Sbjct: 339 NVEALVARGALYATKGSLNKAIEDFELALENC-PTHRNARKYLCQTLVERGGQLEEEEKF 397
Query: 147 LVSASTYDKLLQVE 160
L + S Y K L ++
Sbjct: 398 LNAESYYKKALTLD 411
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,357,628
Number of Sequences: 539616
Number of extensions: 1981747
Number of successful extensions: 5682
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 5646
Number of HSP's gapped (non-prelim): 85
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)