Query psy4124
Match_columns 99
No_of_seqs 111 out of 499
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 17:35:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4124.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4124hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gy6_A Nuclear transport facto 100.0 1.5E-34 5.2E-39 197.1 8.9 92 5-99 3-127 (127)
2 1zo2_A NTF2, nuclear transport 100.0 3.4E-33 1.2E-37 191.0 9.0 91 3-96 5-129 (129)
3 1gy7_A Nuclear transport facto 100.0 8.5E-32 2.9E-36 183.1 8.6 86 8-96 4-124 (125)
4 3q90_A RAS GTPase-activating p 100.0 1.2E-31 3.9E-36 185.6 7.8 93 4-99 4-140 (140)
5 3ujm_A Rasputin; NTF2-like fol 100.0 1.9E-31 6.5E-36 180.2 6.1 85 8-94 2-120 (120)
6 2qiy_A UBP3-associated protein 100.0 9.2E-31 3.1E-35 183.2 8.2 93 4-99 6-152 (154)
7 3nv0_B NTF2-related export pro 100.0 1.1E-29 3.8E-34 179.0 8.8 86 7-95 31-154 (154)
8 1jkg_A P15; NTF2-like domain, 100.0 1.1E-28 3.8E-33 170.3 9.0 87 7-96 11-138 (140)
9 1jkg_B TAP; NTF2-like domain, 99.8 1.2E-20 4.2E-25 140.9 8.5 87 6-95 11-169 (250)
10 1of5_A MRNA export factor MEX6 99.8 2.1E-19 7.2E-24 132.9 5.9 86 6-94 7-201 (221)
11 1q40_B MEX67, mRNA export fact 99.8 6.5E-19 2.2E-23 130.0 6.6 87 6-95 10-208 (219)
12 3nv0_A Nuclear RNA export fact 99.4 2.1E-12 7.3E-17 94.2 9.0 85 6-93 9-182 (205)
13 1q42_A MTR2, mRNA transport re 99.0 4.7E-11 1.6E-15 86.8 0.3 74 4-80 20-146 (201)
14 1of5_B MTR2, YKL186C, mRNA tra 98.2 2E-06 6.7E-11 61.9 5.0 70 8-80 14-121 (184)
15 3d9r_A Ketosteroid isomerase-l 97.3 0.0023 7.9E-08 40.5 8.7 91 1-94 2-133 (135)
16 4i4k_A Uncharacterized protein 97.2 0.0013 4.6E-08 43.6 7.4 74 13-88 21-134 (143)
17 3rob_A Uncharacterized conserv 96.7 0.0088 3E-07 39.9 7.9 80 10-91 16-134 (139)
18 3gzr_A Uncharacterized protein 96.7 0.0076 2.6E-07 40.3 7.3 78 13-92 8-128 (146)
19 3hx8_A MLR2180 protein, putati 96.5 0.014 4.9E-07 36.3 7.3 52 8-61 3-55 (129)
20 3cu3_A Domain of unknown funct 96.2 0.014 4.9E-07 39.2 6.4 49 11-61 16-65 (172)
21 3er7_A Uncharacterized NTF2-li 95.7 0.024 8.2E-07 37.8 5.5 46 15-61 6-55 (131)
22 3f7s_A Uncharacterized NTF2-li 95.5 0.085 2.9E-06 33.9 7.7 54 6-61 3-58 (142)
23 3gwr_A Putative calcium/calmod 95.3 0.072 2.4E-06 35.4 6.9 75 13-89 10-123 (144)
24 3h51_A Putative calcium/calmod 95.0 0.26 9E-06 32.3 9.0 49 11-61 20-70 (156)
25 3h3h_A Uncharacterized snoal-l 94.9 0.02 6.7E-07 36.3 3.1 49 11-61 8-65 (122)
26 2rcd_A Uncharacterized protein 94.7 0.47 1.6E-05 30.1 9.5 77 10-89 14-122 (129)
27 2gxf_A Hypothetical protein YY 94.6 0.09 3.1E-06 34.0 5.7 47 13-61 5-52 (142)
28 3dmc_A NTF2-like protein; stru 94.4 0.053 1.8E-06 35.4 4.4 57 3-61 4-64 (134)
29 3bb9_A Putative orphan protein 94.3 0.053 1.8E-06 35.4 4.2 48 10-59 29-76 (148)
30 1oh0_A Steroid delta-isomerase 94.3 0.023 8E-07 35.6 2.4 49 11-61 7-57 (131)
31 3b7c_A Uncharacterized protein 93.4 0.86 3E-05 28.6 9.8 46 14-61 8-55 (122)
32 1s5a_A Hypothetical protein YE 93.1 0.13 4.6E-06 32.8 4.4 48 12-61 11-64 (150)
33 1z1s_A Hypothetical protein PA 92.7 0.13 4.6E-06 34.1 4.0 53 3-61 19-77 (163)
34 3mso_A Steroid delta-isomerase 92.4 0.18 6.2E-06 33.3 4.4 48 12-61 10-59 (143)
35 1ohp_A Steroid delta-isomerase 92.3 0.11 3.9E-06 31.5 3.1 48 12-61 6-55 (125)
36 1nww_A Limonene-1,2-epoxide hy 91.8 0.35 1.2E-05 30.9 5.2 47 13-61 24-71 (149)
37 3fh1_A Uncharacterized NTF2-li 91.7 0.23 7.9E-06 31.4 4.2 49 11-61 17-70 (129)
38 3i0y_A Putative polyketide cyc 91.4 0.18 6.2E-06 31.9 3.4 48 12-61 9-57 (140)
39 2chc_A Protein RV3472; hypothe 91.1 0.34 1.2E-05 32.0 4.7 48 12-61 15-62 (170)
40 3dm8_A Uncharacterized protein 91.1 0.14 4.6E-06 33.4 2.6 46 14-61 7-60 (143)
41 3en8_A Uncharacterized NTF-2 l 90.6 0.25 8.4E-06 31.9 3.5 48 12-61 6-55 (128)
42 3ec9_A Uncharacterized NTF2-li 90.3 0.3 1E-05 31.0 3.7 45 14-60 15-64 (140)
43 4h3u_A Hypothetical protein; s 90.2 2.4 8.1E-05 27.6 8.2 45 15-61 29-75 (158)
44 3f7x_A Putative polyketide cyc 90.2 0.2 6.9E-06 33.0 2.8 47 13-61 22-69 (151)
45 2owp_A Hypothetical protein BX 90.0 2.1 7.4E-05 27.7 7.8 50 10-61 11-61 (129)
46 2a15_A Hypothetical protein RV 89.6 0.14 4.8E-06 32.5 1.6 47 13-61 9-64 (139)
47 3b8l_A Uncharacterized protein 89.1 3.3 0.00011 26.9 8.7 51 10-61 27-80 (163)
48 3cnx_A Uncharacterized protein 88.8 0.96 3.3E-05 31.2 5.6 47 13-61 14-78 (170)
49 3rga_A Epoxide hydrolase; NTF2 88.6 0.45 1.5E-05 35.0 3.9 50 10-61 137-188 (283)
50 2ux0_A Calcium-calmodulin depe 88.3 1.7 5.9E-05 27.5 6.3 48 12-61 14-64 (143)
51 2rfr_A Uncharacterized protein 87.0 0.63 2.2E-05 29.9 3.6 48 12-61 20-68 (155)
52 3f40_A Uncharacterized NTF2-li 86.5 0.8 2.7E-05 28.9 3.8 47 13-61 8-54 (114)
53 3ff2_A Uncharacterized cystati 86.2 0.78 2.7E-05 28.3 3.6 46 14-61 5-52 (117)
54 3duk_A NTF2-like protein of un 86.2 4.9 0.00017 25.7 8.1 79 13-93 14-123 (125)
55 3jum_A Phenazine biosynthesis 86.1 0.55 1.9E-05 33.2 3.0 48 11-61 41-94 (185)
56 3dxo_A Uncharacterized snoal-l 85.6 0.6 2.1E-05 29.5 2.8 47 14-61 6-55 (121)
57 3ehc_A Snoal-like polyketide c 85.6 0.83 2.8E-05 28.6 3.5 43 14-61 6-48 (128)
58 2k54_A Protein ATU0742; protei 85.1 0.8 2.7E-05 28.4 3.2 47 13-61 5-53 (123)
59 3rga_A Epoxide hydrolase; NTF2 84.3 0.77 2.6E-05 33.7 3.3 48 12-61 7-56 (283)
60 3mg1_A OCP, orange carotenoid 83.8 1.8 6E-05 33.4 5.1 47 12-61 193-241 (323)
61 2bng_A MB2760; epoxide hydrola 83.5 1.1 3.6E-05 28.9 3.4 49 11-61 15-64 (149)
62 3fgy_A Uncharacterized NTF2-li 83.1 1.1 3.8E-05 27.9 3.2 48 12-61 6-58 (135)
63 2gey_A ACLR protein; alpha+bet 82.3 2 6.9E-05 27.9 4.4 47 12-61 5-51 (158)
64 3ebt_A Uncharacterized NTF2-li 82.1 1.1 3.9E-05 27.7 3.0 46 14-61 6-59 (132)
65 1tuh_A BAL32A, hypothetical pr 81.9 1.4 4.8E-05 28.5 3.5 49 11-61 29-82 (156)
66 3k0z_A Putative polyketide cyc 81.6 1.3 4.6E-05 29.1 3.4 54 6-61 29-83 (159)
67 3f14_A Uncharacterized NTF2-li 81.2 2 6.9E-05 26.5 3.9 45 15-61 4-49 (112)
68 2gex_A SNOL; alpha+beta barrel 81.0 1.8 6.3E-05 27.8 3.8 48 12-61 5-52 (152)
69 3g8z_A Protein of unknown func 80.6 1.2 4.1E-05 28.9 2.8 47 13-61 22-73 (148)
70 3f8x_A Putative delta-5-3-keto 80.1 1.4 4.9E-05 29.4 3.1 49 11-61 20-70 (148)
71 3kkg_A Putative snoal-like pol 79.6 1.7 5.7E-05 27.7 3.2 48 12-61 10-61 (146)
72 3fka_A Uncharacterized NTF-2 l 79.2 3.8 0.00013 26.0 4.8 82 8-93 7-119 (120)
73 3soy_A NTF2-like superfamily p 78.9 11 0.00037 24.5 9.6 49 10-60 10-59 (145)
74 3gzb_A Putative snoal-like pol 77.4 4.8 0.00016 27.7 5.0 47 13-61 22-70 (154)
75 3ff0_A Phenazine biosynthesis 76.0 1.6 5.3E-05 30.3 2.4 50 9-61 17-72 (163)
76 3hk4_A MLR7391 protein; NTF2-l 75.9 11 0.00036 24.5 6.4 47 14-61 23-73 (136)
77 3g16_A Uncharacterized protein 75.5 2.8 9.7E-05 28.5 3.6 50 10-61 9-62 (156)
78 2imj_A Hypothetical protein DU 75.2 4.4 0.00015 28.3 4.4 55 5-61 11-65 (166)
79 3f9s_A Putative polyketide cyc 74.2 4.2 0.00014 25.7 4.0 47 13-61 8-60 (146)
80 3a76_A Gamma-hexachlorocyclohe 74.1 2.1 7.3E-05 28.6 2.6 48 12-61 32-80 (176)
81 3f8h_A Putative polyketide cyc 73.0 1.9 6.6E-05 28.1 2.1 45 15-61 22-67 (150)
82 2f99_A Aklanonic acid methyl e 72.1 1.2 4.2E-05 28.9 1.0 48 12-61 12-61 (153)
83 2rgq_A Domain of unknown funct 71.4 4.9 0.00017 25.6 3.8 50 10-61 9-58 (144)
84 3g0k_A Putative membrane prote 71.0 6.7 0.00023 25.6 4.5 51 8-61 24-75 (148)
85 1sjw_A Nogalonic acid methyl e 69.2 1.6 5.5E-05 27.5 1.0 47 13-61 4-52 (144)
86 3ef8_A Putative scyalone dehyd 68.0 5.4 0.00019 25.7 3.5 46 14-61 14-60 (150)
87 3grd_A Uncharacterized NTF2-su 64.4 1.4 4.7E-05 27.5 -0.0 44 14-59 7-55 (134)
88 3ejv_A Uncharacterized protein 57.7 6.6 0.00023 26.6 2.5 48 12-61 27-83 (179)
89 3ecf_A NTF2-like protein; stru 57.2 27 0.00092 23.3 5.3 75 14-95 8-99 (130)
90 3lyg_A NTF2-like protein of un 56.2 2.5 8.4E-05 28.2 0.1 43 17-61 8-52 (120)
91 2r4i_A Uncharacterized protein 53.2 33 0.0011 20.3 6.2 45 15-61 10-54 (123)
92 3flj_A Uncharacterized protein 50.2 16 0.00055 24.7 3.5 46 14-61 21-68 (155)
93 3blz_A NTF2-like protein of un 44.8 45 0.0015 20.6 4.8 79 13-93 14-124 (128)
94 1tp6_A Hypothetical protein PA 40.2 67 0.0023 20.1 8.2 55 6-61 3-59 (128)
95 3ke7_A Putative ketosteroid is 37.9 43 0.0015 21.7 4.0 32 28-61 30-64 (134)
96 3fsd_A NTF2-like protein of un 37.5 59 0.002 20.1 4.5 46 14-61 17-62 (134)
97 2f86_B Hypothetical protein K1 37.4 73 0.0025 20.6 5.1 74 15-89 16-128 (143)
98 2xyk_A 2-ON-2 hemoglobin; oxyg 31.3 30 0.001 22.3 2.4 37 1-39 1-44 (133)
99 1s2x_A CAG-Z; CAG pathogenicit 30.9 49 0.0017 22.8 3.4 31 3-33 25-55 (206)
100 1b5f_B Protein (cardosin A); h 28.8 2.8 9.6E-05 25.0 -2.9 15 11-25 61-75 (87)
101 3j20_S 30S ribosomal protein S 23.4 66 0.0023 19.0 2.7 21 7-29 7-27 (67)
No 1
>1gy6_A Nuclear transport factor 2; 1.6A {Rattus norvegicus} SCOP: d.17.4.2 PDB: 1a2k_A 1oun_A 1ar0_A 1u5o_A 1ask_A 1gy5_A 1jb5_A 1jb4_A 1jb2_A 1qma_A
Probab=100.00 E-value=1.5e-34 Score=197.10 Aligned_cols=92 Identities=40% Similarity=0.801 Sum_probs=87.8
Q ss_pred CCccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh-----------------------
Q psy4124 5 LNPAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF----------------------- 61 (99)
Q Consensus 5 ~~p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl----------------------- 61 (99)
++|++++||++||++||++|| ++|+.|++||.++ |+++|+|+.++|+++|.++|
T Consensus 3 ~~p~~~~v~~~Fv~~YY~~~d--~~r~~L~~~Y~~~-S~ls~~g~~~~G~~~I~~~l~~Lp~~~~~h~i~t~d~qp~~~~ 79 (127)
T 1gy6_A 3 DKPIWEQIGSSFIQHYYQLFD--NDRTQLGAIYIDA-SCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDS 79 (127)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH--HHGGGGGGGEEEE-EEEEETTEEEESHHHHHHHHHHCSCSCEEEEEEEEEEEECTTS
T ss_pred CCCCHHHHHHHHHHHHHHHHh--CCHHHHHHhhCCC-cEEEECCccccCHHHHHHHHHhCCCcceEEEEEEEEEEEeCCC
Confidence 589999999999999999999 8999999999998 99999999999999999999
Q ss_pred ----------hcCCCCCeeEEEEEEEEeeCCEEEEEcceEeeecCCCC
Q psy4124 62 ----------NCDDDPPHAYSQIFVLKPLGASFYCQHDIFRLGIHDTA 99 (99)
Q Consensus 62 ----------~~d~~~~~~F~QtF~L~~~~~~y~v~NDifR~~~~n~~ 99 (99)
+.+++++++|+|||+|+|++++|+|.||||||++||+|
T Consensus 80 ~ili~V~G~~~~~~~~~~~F~qtF~L~p~~~~~~I~nD~fr~~~~~~~ 127 (127)
T 1gy6_A 80 CIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNFG 127 (127)
T ss_dssp CEEEEEEEEEEETTSCCEEEEEEEEEEEETTEEEEEEEEEEECCCCCC
T ss_pred cEEEEEEEEEEECCCCcceEeEEEEEEEeCCEEEEEEEEEEEEccccc
Confidence 34567899999999999999999999999999999997
No 2
>1zo2_A NTF2, nuclear transport factor 2; structural genomics, structural genomics consortium, SGC, transport protein; 1.60A {Cryptosporidium parvum} SCOP: d.17.4.2
Probab=100.00 E-value=3.4e-33 Score=191.00 Aligned_cols=91 Identities=43% Similarity=0.808 Sum_probs=84.1
Q ss_pred CCCCccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh---------------------
Q psy4124 3 SQLNPAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF--------------------- 61 (99)
Q Consensus 3 ~~~~p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl--------------------- 61 (99)
-.++|++++||++||++||++|| ++|+.|++||.++ |+|+|+|+.++|+++|.++|
T Consensus 5 ~~~~p~~~~v~~~Fv~~YY~~~d--~~r~~L~~~Y~~~-S~ls~~g~~~~G~~~I~~~l~~Lp~~~~~h~i~t~D~qp~~ 81 (129)
T 1zo2_A 5 INLNPQFDQIGKQFVQHYYQTFQ--TNRPALGGLYGPQ-SMLTWEDTQFQGQANIVNKFNSLNFQRVQFEITRVDCQPSP 81 (129)
T ss_dssp CBCCTTHHHHHHHHHHHHHHHHH--HCGGGGGGGEEEE-EEEEETTEEEESHHHHHHHHHHHCCSCEEEEEEEEEEEECT
T ss_pred cCCCCCHHHHHHHHHHHHHHHHh--CCHHHHHHhhCCC-cEEEECCceeccHHHHHHHHHhCCCcceEEEEEEEEEEEeC
Confidence 45799999999999999999999 9999999999998 99999999999999999999
Q ss_pred ------------hcCCCCCeeEEEEEEEEeeC-CEEEEEcceEeeecC
Q psy4124 62 ------------NCDDDPPHAYSQIFVLKPLG-ASFYCQHDIFRLGIH 96 (99)
Q Consensus 62 ------------~~d~~~~~~F~QtF~L~~~~-~~y~v~NDifR~~~~ 96 (99)
+.+++++++|+|||+|+|++ ++|+|.||||||++|
T Consensus 82 ~~gilI~V~G~~~~~~~~~~~F~qtF~L~p~~~~~y~I~nD~fR~~~~ 129 (129)
T 1zo2_A 82 NNGSIVFVTGDVRIDDGQPLKFSQVFNLMPSGNGGFMIFNDLFRLNLG 129 (129)
T ss_dssp BSSEEEEEEEEEEETTCCCEEEEEEEEEEECSSSCEEEEEEEEEEC--
T ss_pred CCcEEEEEEEEEEECCCCcceEEEEEEEEEcCCCcEEEEeEEEEEecC
Confidence 34567899999999999998 899999999999986
No 3
>1gy7_A Nuclear transport factor 2; protein transport; 1.6A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1gyb_A
Probab=99.97 E-value=8.5e-32 Score=183.05 Aligned_cols=86 Identities=44% Similarity=0.770 Sum_probs=81.0
Q ss_pred cHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh--------------------------
Q psy4124 8 AYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF-------------------------- 61 (99)
Q Consensus 8 ~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl-------------------------- 61 (99)
++++||++||++||++|| ++|+.|++||.++ |+++|+|+.++|+++|.++|
T Consensus 4 ~~~~v~~~Fv~~YY~~~d--~~r~~L~~~Y~~~-S~~s~~g~~~~G~~~I~~~l~~Lp~~~~~h~i~t~D~qp~~~~~gi 80 (125)
T 1gy7_A 4 DFNTLAQNFTQFYYNQFD--TDRSQLGNLYRNE-SMLTFETSQLQGAKDIVEKLVSLPFQKVQHRITTLDAQPASPYGDV 80 (125)
T ss_dssp CHHHHHHHHHHHHHHHHH--HHGGGGGGGEEEE-EEEEETTEEEESHHHHHHHHHHSCCSCEEEEEEEEEEEESSTTSCE
T ss_pred CHHHHHHHHHHHHHHHHc--CCHHHHHHhhCCC-cEEEECCcEecCHHHHHHHHHhCCCcceEEEEEEEEEEEecCCCeE
Confidence 799999999999999999 8999999999998 99999999999999999999
Q ss_pred --------hcCCC-CCeeEEEEEEEEeeCCEEEEEcceEeeecC
Q psy4124 62 --------NCDDD-PPHAYSQIFVLKPLGASFYCQHDIFRLGIH 96 (99)
Q Consensus 62 --------~~d~~-~~~~F~QtF~L~~~~~~y~v~NDifR~~~~ 96 (99)
+.+++ ++++|+|||+|+|++++|+|.||||||++|
T Consensus 81 li~V~G~~~~~~~~~~~~F~qtF~L~p~~~~~~I~nD~fr~~~~ 124 (125)
T 1gy7_A 81 LVMITGDLLIDEEQNPQRFSQVFHLIPDGNSYYVFNDIFRLNYS 124 (125)
T ss_dssp EEEEEEEEEETTCSSCEEEEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEEEEEECCCCCCccEeEEEEEEEeCCEEEEEEEEEEEecC
Confidence 23445 899999999999999999999999999987
No 4
>3q90_A RAS GTPase-activating protein-binding protein 1; structural genomics, structural genomics consortium, SGC, NT (A+B proteins); 1.70A {Homo sapiens} SCOP: d.17.4.0
Probab=99.97 E-value=1.2e-31 Score=185.59 Aligned_cols=93 Identities=29% Similarity=0.484 Sum_probs=78.2
Q ss_pred CCCccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc-----Cc---eeccHHHHHhhh--------------
Q psy4124 4 QLNPAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE-----GI---QLQGAVKIMEKF-------------- 61 (99)
Q Consensus 4 ~~~p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e-----g~---~~~G~~~I~~kl-------------- 61 (99)
+.+|++++||++||++||++|| ++|+.|++||.++ |+|+|+ |+ .++|+++|.+||
T Consensus 4 ~~~p~~~~vg~~Fv~~YY~~ld--~~r~~L~~~Y~~~-S~l~~~~~~~ng~~~~~~~G~~~I~~~l~~Lp~~~~~~~I~t 80 (140)
T 3q90_A 4 MEKPSPLLVGREFVRQYYTLLN--QAPDMLHRFYGKN-SSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRH 80 (140)
T ss_dssp ----CHHHHHHHHHHHHHHHHH--HCGGGGGGGEEEE-EEEC----------CCCEEHHHHHHHHHHHTCCCSCEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHHHh--cCHHHHHhhcccC-ceEEEEccCCCCceeecccCHHHHHHHHHhCCCccceEEEEe
Confidence 3489999999999999999999 9999999999998 999994 53 789999999999
Q ss_pred -------------------hcCCCCCeeEEEEEEEEeeC---CEEEEEcceEeeecCCCC
Q psy4124 62 -------------------NCDDDPPHAYSQIFVLKPLG---ASFYCQHDIFRLGIHDTA 99 (99)
Q Consensus 62 -------------------~~d~~~~~~F~QtF~L~~~~---~~y~v~NDifR~~~~n~~ 99 (99)
+.+++++++|+|||+|+|++ ++|+|+||||||+..=||
T Consensus 81 vD~Qps~~~gilI~V~G~l~~~~~~~~~F~QtF~L~p~~~~~~~y~V~nDifR~~de~~~ 140 (140)
T 3q90_A 81 VDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFG 140 (140)
T ss_dssp EEEEECGGGCEEEEEEEEEECTTCCCEEEEEEEEEEECSSSTTCEEEEEEEEEEGGGC--
T ss_pred EEEEEeCCCCEEEEEEEEEecCCCCccEEEEEEEEeecCCCCCCEEEEEEEeEeehhhcC
Confidence 45678899999999999996 899999999999986543
No 5
>3ujm_A Rasputin; NTF2-like fold, RAS signaling, signaling protein; HET: EPE; 2.74A {Drosophila melanogaster}
Probab=99.97 E-value=1.9e-31 Score=180.23 Aligned_cols=85 Identities=29% Similarity=0.584 Sum_probs=75.4
Q ss_pred cHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh--------------------------
Q psy4124 8 AYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF-------------------------- 61 (99)
Q Consensus 8 ~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl-------------------------- 61 (99)
++++||++||++||++|| ++|+.|++||.+++++++|||+.++|+++|.+||
T Consensus 2 s~~~vg~~Fv~~YY~~ld--~~r~~L~~~Y~~~s~~~~~~~~~~~G~~~I~~~l~~Lpf~~~~~~I~t~D~Qp~~~~gil 79 (120)
T 3ujm_A 2 SHMSVGREFVRQYYTLLN--KAPNHLHRFYNHNSSYIHGESKLVVGQREIHNRIQQLNFNDCHAKISQVDAQATLGNGVV 79 (120)
T ss_dssp --CCHHHHHHHHHHHHHH--HCGGGGGGGEEEEEEEEETTCCCEESHHHHHHHHHHHCCCSCEEEEEEEEEEEEGGGEEE
T ss_pred CHHHHHHHHHHHHHHHHh--cCHHHHhhhecccceEEEcCCcEecCHHHHHHHHHcCCCcceEEEEecccceEcCCCCEE
Confidence 577899999999999999 9999999999998335566899999999999999
Q ss_pred -------hcCCCCCeeEEEEEEEEeeC-CEEEEEcceEeee
Q psy4124 62 -------NCDDDPPHAYSQIFVLKPLG-ASFYCQHDIFRLG 94 (99)
Q Consensus 62 -------~~d~~~~~~F~QtF~L~~~~-~~y~v~NDifR~~ 94 (99)
+.+++|+|+|+|||+|+|++ ++|+|+||||||.
T Consensus 80 i~V~G~l~~~~~~~r~F~QtF~L~p~~~~~y~V~nDifR~q 120 (120)
T 3ujm_A 80 VQVTGELSNDGQPMRRFTQTFVLAAQSPKKYYVHNDIFRYQ 120 (120)
T ss_dssp EEEEEEEESTTCCCEEEEEEEEEEECSTTCEEEEEEEEEEC
T ss_pred EEEEEEEEeCCCCCceEEEEEEEEEcCCCCEEEEEEEEecC
Confidence 45677899999999999996 8999999999984
No 6
>2qiy_A UBP3-associated protein BRE5; deubiquitylation, ubiquitin-specific processing proteases(UB NTF2, protein-protein recognition; 1.69A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1zx2_A
Probab=99.97 E-value=9.2e-31 Score=183.20 Aligned_cols=93 Identities=22% Similarity=0.368 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc---------------CceeccHHHHHhhh-------
Q psy4124 4 QLNPAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE---------------GIQLQGAVKIMEKF------- 61 (99)
Q Consensus 4 ~~~p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e---------------g~~~~G~~~I~~kl------- 61 (99)
+|+|++++||++||++||++|| ++|+.|++||.++ |+++|+ |..++|+++|.++|
T Consensus 6 ~~~p~~~~v~~~Fv~~YY~~~d--~~r~~L~~~Y~~~-S~~s~~~~~~~s~~~~~d~~~~~~~~G~~~I~~~l~~L~~pf 82 (154)
T 2qiy_A 6 SMGVTVQDICFAFLQNYYERMR--TDPSKLAYFYAST-AELTHTNYQSKSTNEKDDVLPTVKVTGRENINKFFSRNDAKV 82 (154)
T ss_dssp ---CCHHHHHHHHHHHHHHHHH--HCGGGGGGGEEEE-EEEEEECTTCC----CCSSCCEEEEESHHHHHHHHHHTHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHh--CCHHHHHHhhCCC-cEEEEccccccccccccccccceEeeCHHHHHHHHHhccCCC
Confidence 5789999999999999999999 9999999999998 999999 89999999999888
Q ss_pred ------------------------------hcCCCCCeeEEEEEEEEeeC--CEEEEEcceEeeecCCCC
Q psy4124 62 ------------------------------NCDDDPPHAYSQIFVLKPLG--ASFYCQHDIFRLGIHDTA 99 (99)
Q Consensus 62 ------------------------------~~d~~~~~~F~QtF~L~~~~--~~y~v~NDifR~~~~n~~ 99 (99)
+.+++++|+|+|||+|+|++ ++|+|.||||||+.+|++
T Consensus 83 ~~~~h~I~s~D~q~~~~~~~~ilI~V~G~~~~~~~~~r~F~qtFvL~p~~~~~~y~I~ND~fr~~~~~~~ 152 (154)
T 2qiy_A 83 RSLKLKLDTIDFQYTGHLHKSILIMATGEMFWTGTPVYKFCQTFILLPSSNGSTFDITNDIIRFISNSFK 152 (154)
T ss_dssp TTEEEEEEEEEEEEESGGGCEEEEEEEEEEEETTCCCEEEEEEEEEEECC---CEEEEEEEEEEECC---
T ss_pred CceEEEEEEEEEEEccCCCCEEEEEEEEEEEECCCCCceEEEEEEEEEeCCCCcEEEEEEEEEEEcceec
Confidence 23457899999999999997 589999999999999975
No 7
>3nv0_B NTF2-related export protein; NTF2-like domain, beta sheet heterodimer interface, nucleopo binding pocket, water mediated interface; 1.84A {Caenorhabditis elegans}
Probab=99.96 E-value=1.1e-29 Score=178.95 Aligned_cols=86 Identities=23% Similarity=0.324 Sum_probs=78.4
Q ss_pred ccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh-----------------hc------
Q psy4124 7 PAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF-----------------NC------ 63 (99)
Q Consensus 7 p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl-----------------~~------ 63 (99)
..+.+||++||++||++|| ++|+.|++||.++ |+|+|||+.+.|+++|.++| ..
T Consensus 31 ~~a~~vg~~FV~qYY~~~d--~~R~~L~~fY~d~-S~ls~~g~~~~G~~~I~~~l~~Lp~~~h~I~s~D~qp~~~~~~~q 107 (154)
T 3nv0_B 31 EELCNESKKFMDVYYDVMD--RKREKIGFLYTQV-SNAVWNGNPINGYDSICEFMKALPSTQHDIQSLDAQRLPEGVTGD 107 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HCGGGGGGGEEEE-EEEEETTEEEESHHHHHHHHHHSCCEEEEEEEEEEEECCTTCCGG
T ss_pred HHHHHHHHHHHHHHHHHHh--CCHHHHHHHhcCC-cEEEECCeecccHHHHHHHHHhCCCeEEEEEEEEEEEcCccccCC
Confidence 3566899999999999999 8999999999998 99999999999999999999 12
Q ss_pred ---------------CCCCCeeEEEEEEEEeeCCEEEEEcceEeeec
Q psy4124 64 ---------------DDDPPHAYSQIFVLKPLGASFYCQHDIFRLGI 95 (99)
Q Consensus 64 ---------------d~~~~~~F~QtF~L~~~~~~y~v~NDifR~~~ 95 (99)
+++++|+|+|||+|+|++++|+|.||||||+.
T Consensus 108 ~~~~ilI~V~G~l~~~~~~~r~F~QtFvL~p~~~~y~V~NDifR~vd 154 (154)
T 3nv0_B 108 MSGGMLLNVAGAVTVDGDSKRAFTQTLLLGVEDGKYKVKSDRFRYVD 154 (154)
T ss_dssp GTTCEEEEEEEEEEETTSCCEEEEEEEEEEEETTEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEECCCCceeEEEEEEEEEeCCEEEEEeeEEEecC
Confidence 24578999999999999999999999999974
No 8
>1jkg_A P15; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_A
Probab=99.95 E-value=1.1e-28 Score=170.31 Aligned_cols=87 Identities=21% Similarity=0.369 Sum_probs=79.8
Q ss_pred ccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh-------------------------
Q psy4124 7 PAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF------------------------- 61 (99)
Q Consensus 7 p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl------------------------- 61 (99)
..+.+||++||++||++|| ++|+.|++||.++ |+|+|+|+.++|+++|.++|
T Consensus 11 ~~a~~v~~~Fv~~YY~~~d--~~r~~L~~~Y~~~-S~ls~~g~~~~G~~~I~~~l~~Lp~~~h~i~s~d~q~~~~~~~~~ 87 (140)
T 1jkg_A 11 DQACRAAEEFVNVYYTTMD--KRRRLLSRLYMGT-ATLVWNGNAVSGQESLSEFFEMLPSSEFQISVVDCQPVHDEATPS 87 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HCGGGGGGGEEEE-EEEEETTEEEESHHHHHHHHHHSCCEEEEEEEEEEEECCTTTSTT
T ss_pred HHHHHHHHHHHHHHHHHHh--CCHHHHHHhcCCC-cEEEECCeeecCHHHHHHHHHhCCCceeEEEEEEEEEcCCcccCC
Confidence 4678999999999999999 8999999999998 99999999999999999999
Q ss_pred ------------hcCCCCCeeEEEEEEEEeeC----CEEEEEcceEeeecC
Q psy4124 62 ------------NCDDDPPHAYSQIFVLKPLG----ASFYCQHDIFRLGIH 96 (99)
Q Consensus 62 ------------~~d~~~~~~F~QtF~L~~~~----~~y~v~NDifR~~~~ 96 (99)
+.+++++++|+|||+|+|++ ++|+|.||||||+..
T Consensus 88 ~~~ilI~V~G~~~~~~~~~r~F~qtF~L~p~~~p~~~~~~I~nD~frl~~~ 138 (140)
T 1jkg_A 88 QTTVLVVICGSVKFEGNKQRDFNQNFILTAQASPSNTVWKIASDCFRFQDW 138 (140)
T ss_dssp CCEEEEEEEEEEEETTSCCEEEEEEEEEEEECCSSSCEEEEEEEEEEETTT
T ss_pred CCeEEEEEEEEEEECCCCceeeeEEEEEEecCCCCCCeEEEEeeEEEeecC
Confidence 23456899999999999874 899999999999876
No 9
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=99.83 E-value=1.2e-20 Score=140.89 Aligned_cols=87 Identities=18% Similarity=0.344 Sum_probs=76.1
Q ss_pred CccHHHHHHHHHHHHHHhccCCCC-hhhhhhhccCCCceeeEcCc---------------------------------ee
Q psy4124 6 NPAYEAIGKGFVQQYYALFDDPAQ-RPNLINMYNTETSFMTFEGI---------------------------------QL 51 (99)
Q Consensus 6 ~p~~~~ig~~FV~~YY~~~d~~~~-r~~L~~~Y~~~~S~lt~eg~---------------------------------~~ 51 (99)
++.++++|++||++||++|| ++ |..|.++|.++ |+++|++. .+
T Consensus 11 ~~~~~~~~~~Fv~~Yy~~fD--~~~R~~L~~lY~~~-s~fS~~~~~~~~~~~~~~~~~Y~~~sRNl~~~~~~~~r~~~~~ 87 (250)
T 1jkg_B 11 TENLKSLVLHFLQQYYAIYD--SGDRQGLLDAYHDG-ACCSLSIPFIPQNPARSSLAEYFKDSRNVKKLKDPTLRFRLLK 87 (250)
T ss_dssp SHHHHHHHHHHHHHHHHHHT--SSCGGGGGGTEEEE-EEEEEECCCC------CCCHHHHTTBCCTTTCCCHHHHHHHSE
T ss_pred CHHHHHHHHHHHHHHHHHHC--cCcHHHHHHhhCcC-cEEEEEeCCCCCCccccchhhhhhhccchhcccchhhhhhhhc
Confidence 56788999999999999999 77 99999999998 99999843 57
Q ss_pred ccHHHHHhhh---------------------------------hcCC----CCCeeEEEEEEEEee-CCEEEEEcceEee
Q psy4124 52 QGAVKIMEKF---------------------------------NCDD----DPPHAYSQIFVLKPL-GASFYCQHDIFRL 93 (99)
Q Consensus 52 ~G~~~I~~kl---------------------------------~~d~----~~~~~F~QtF~L~~~-~~~y~v~NDifR~ 93 (99)
+|+++|+++| +.++ +++|.|+|||+|.|. +++|+|.||+||+
T Consensus 88 ~G~~~I~~~l~~LP~t~H~~~s~~vD~~~~~~~~i~i~V~G~f~e~~~~~~~~~r~F~rtFvL~p~~~~~~~I~ND~l~l 167 (250)
T 1jkg_B 88 HTRLNVVAFLNELPKTQHDVNSFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFV 167 (250)
T ss_dssp ESHHHHHHHHTTSCCEEECGGGCEEEEEEECSSCEEEEEEEEEEECSSTTTTCEEEEEEEEEEEECTTSSEEEEEEEEEE
T ss_pred cCHHHHHHHHHhCCCeeEeccceEEeeeecCCCEEEEEEEEEEEECCCCCCCCceeeEEEEEEEECCCCcEEEEeeEEEE
Confidence 8999999999 3333 578999999999997 5789999999998
Q ss_pred ec
Q psy4124 94 GI 95 (99)
Q Consensus 94 ~~ 95 (99)
--
T Consensus 168 ~~ 169 (250)
T 1jkg_B 168 RN 169 (250)
T ss_dssp EE
T ss_pred EC
Confidence 53
No 10
>1of5_A MRNA export factor MEX67; nuclear protein, repeat, leucine- rich repeat, nuclear transport; 2.8A {Saccharomyces cerevisiae} SCOP: d.17.4.2
Probab=99.77 E-value=2.1e-19 Score=132.88 Aligned_cols=86 Identities=20% Similarity=0.368 Sum_probs=74.1
Q ss_pred CccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCc------------------------------------
Q psy4124 6 NPAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGI------------------------------------ 49 (99)
Q Consensus 6 ~p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~------------------------------------ 49 (99)
++...++|.+||++||++|| ++|..|..||.++ |+++|++.
T Consensus 7 d~~~~~~~~~Fv~~Yy~~fD--sdR~~L~~lY~~~-S~fS~s~~~~~p~~~~~~~~~~~~~~~Y~~~SRNl~ri~~~~~r 83 (221)
T 1of5_A 7 NDALGQSSTDFATNFLNLWD--NNREQLLNLYSPQ-SQFSVSVDSTIPPSTVTDSDQTPAFGYYMSSSRNISKVSSEKSI 83 (221)
T ss_dssp CCTTCHHHHHHHHHHHHHHH--HCGGGGGGGEEEE-EEEEEEECCC----------------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHc--cCHHHHHHhhCcC-cEEEEEecCCCCcccccccccccchhhhhhhccchhcccchhhh
Confidence 45688999999999999999 8999999999998 99999873
Q ss_pred ---eeccHHHHHhhh--------------------------------------hcCCC----------------------
Q psy4124 50 ---QLQGAVKIMEKF--------------------------------------NCDDD---------------------- 66 (99)
Q Consensus 50 ---~~~G~~~I~~kl--------------------------------------~~d~~---------------------- 66 (99)
.++|+++|+++| +.+++
T Consensus 84 ~~~l~~G~~~I~~~l~~LPkT~H~l~~~~~s~~vD~~~~~~~~~i~itV~G~f~e~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (221)
T 1of5_A 84 QQRLSIGQESINSIFKTLPKTKHHLQEQPNEYSMETISYPQINGFVITLHGFFEETGKPELESNKKTGKNNYQKNRRYNH 163 (221)
T ss_dssp ----CBHHHHHHHHHHHSCCEEECTTTSGGGCEEEEEEEGGGTEEEEEEEEEEEEC------------------------
T ss_pred hhhhccCHHHHHHHHHhCCCeeEecccCCCceEEEeEEcCCCCeEEEEEEEEEEECCCcccccccccccccccccccccc
Confidence 567999999998 11122
Q ss_pred ----------CCeeEEEEEEEEeeCCEEEEEcceEeee
Q psy4124 67 ----------PPHAYSQIFVLKPLGASFYCQHDIFRLG 94 (99)
Q Consensus 67 ----------~~~~F~QtF~L~~~~~~y~v~NDifR~~ 94 (99)
+++.|+|||+|.|.+++|+|.||+||+-
T Consensus 164 ~~~~~~~~~~~~rsF~RTFvL~P~~~~~~I~nD~l~ir 201 (221)
T 1of5_A 164 GYNSTSNNKLSKKSFDRTWVIVPMNNSVIIASDLLTVR 201 (221)
T ss_dssp -----CCSCCEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cccccccccCCccceEEEEEEEecCCeEEEEeeEEEee
Confidence 4688999999999999999999999984
No 11
>1q40_B MEX67, mRNA export factor MEX67; NTF2-fold, nuclear export, translation; 1.95A {Candida albicans} SCOP: d.17.4.2
Probab=99.76 E-value=6.5e-19 Score=130.04 Aligned_cols=87 Identities=21% Similarity=0.359 Sum_probs=71.7
Q ss_pred CccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCc------------------------------------
Q psy4124 6 NPAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGI------------------------------------ 49 (99)
Q Consensus 6 ~p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~------------------------------------ 49 (99)
++...++|.+||++||++|| ++|..|..||.++ |+++|++.
T Consensus 10 ~~~~~~~~~~Fl~~Yy~~fD--sdR~~L~~lY~~~-S~fS~s~~~~~p~~~~~~~~~~~~~~~~~~Y~~~SRNl~ri~~~ 86 (219)
T 1q40_B 10 DEDSRNLATNFIANYLKLWD--ANRSELMILYQNE-SQFSMQVDSSHPHLIESGNSGYSGSTDFGYYLNNSRNLTRVSSI 86 (219)
T ss_dssp ---CHHHHHHHHHHHHHHHH--SCGGGGGGGCCTT-CEEEEEECTTCCCCCCCB------SCCCTTTTTTCCCTTTCCSH
T ss_pred CHHHHHHHHHHHHHHHHHHc--cCHHHHHHhhccc-cEEEEEecCCCCccccccccccccccchhhhhhhccchhcccch
Confidence 45678999999999999999 8999999999998 99999852
Q ss_pred ------eeccHHHHHhhh--------------------------------------hcCC--------------------
Q psy4124 50 ------QLQGAVKIMEKF--------------------------------------NCDD-------------------- 65 (99)
Q Consensus 50 ------~~~G~~~I~~kl--------------------------------------~~d~-------------------- 65 (99)
.++|+++|+++| +.++
T Consensus 87 ~~r~~~l~~G~~~I~~~l~~LPkT~H~l~~~~~s~~vD~~~~p~~~~ilitV~G~f~e~~~~~~~~~~~~~~~~~~~~~~ 166 (219)
T 1q40_B 87 KARMAKLSIGQEQIYKSFQQLPKTRHDIIATPELFSMEVYKFPTLNGIMITLHGSFDEVAQPEVDGSASSAPSGPRGGSR 166 (219)
T ss_dssp HHHHHTCEEHHHHHHHHHHTSCEEECCTTTCGGGCEEEEEECSSTTCEEEEEEEEEEEEECCSSCCCC----------CC
T ss_pred hhhhhhhccCHHHHHHHHHHCCCeeEecccCCCceEEEeEecCCCCeEEEEEEEEEEECCCccccccccccccccccccc
Confidence 467999999999 1111
Q ss_pred -----------CCCeeEEEEEEEEee-CCEEEEEcceEeeec
Q psy4124 66 -----------DPPHAYSQIFVLKPL-GASFYCQHDIFRLGI 95 (99)
Q Consensus 66 -----------~~~~~F~QtF~L~~~-~~~y~v~NDifR~~~ 95 (99)
..++.|+|||+|.|. +++|+|.||+||+--
T Consensus 167 ~~~~~~~~~~~~~~rsF~RtFvL~P~~~~~~~I~nD~l~ir~ 208 (219)
T 1q40_B 167 YHSGPKHKRIPLSKKSFDRTFVVIPGPNGSMIVASDTLLIRP 208 (219)
T ss_dssp SSSSSCCCCCCCCCEEEEEEEEEECC---CCEEEEEEEEEEE
T ss_pred cccccccccccCCccceEEEEEEEECCCCcEEEEeeEEEEec
Confidence 258899999999999 589999999999854
No 12
>3nv0_A Nuclear RNA export factor 2; NTF2-like domain, beta sheet heterodimer interface, nucleopo binding pocket, water mediated interface; 1.84A {Caenorhabditis elegans}
Probab=99.37 E-value=2.1e-12 Score=94.20 Aligned_cols=85 Identities=19% Similarity=0.398 Sum_probs=67.2
Q ss_pred CccHHHHHHHHHHHHHHhccCCCC-----hhhhhhhcc-CCCceee--Ec--C---------------------------
Q psy4124 6 NPAYEAIGKGFVQQYYALFDDPAQ-----RPNLINMYN-TETSFMT--FE--G--------------------------- 48 (99)
Q Consensus 6 ~p~~~~ig~~FV~~YY~~~d~~~~-----r~~L~~~Y~-~~~S~lt--~e--g--------------------------- 48 (99)
++....++..|+++||.++| .+ |..|..+|. ++ |+++ .+ .
T Consensus 9 s~~~~~~v~~Fl~~yf~~yD--~~d~~~~R~~Ll~~Y~~~~-a~FSltv~~~~~p~~~~~~~~~~~~~~Y~~~SRNl~k~ 85 (205)
T 3nv0_A 9 SDEVRTLVEEFIITYYKIYD--GADGQQTRKQLLDAYDTNN-STFTHTVVCLWDPIKFVMYPDSESYRMYLRTSHNVLNQ 85 (205)
T ss_dssp SHHHHHHHHHHHHHHHHHHC--STTHHHHGGGGGGGBCSSS-CEEEEEEECCCCSSSCCCCSCHHHHHHHHHTCCCGGGC
T ss_pred CHHHHHHHHHHHHHHHHHhc--CCCchhhHHHHHHhhCccC-cEEEEEecCCCCcccccccccccchhhhhhhccccccc
Confidence 45677899999999999999 55 999999999 55 6554 11 0
Q ss_pred ---c------eeccHHHHHhhh---------------------------------hcC---------CCCCeeEEEEEEE
Q psy4124 49 ---I------QLQGAVKIMEKF---------------------------------NCD---------DDPPHAYSQIFVL 77 (99)
Q Consensus 49 ---~------~~~G~~~I~~kl---------------------------------~~d---------~~~~~~F~QtF~L 77 (99)
. -.+|+++|+++| +.+ +++++.|+|||+|
T Consensus 86 ~~~~~~r~~~L~~G~~~I~~~L~~LP~T~H~~~s~~vD~~p~~~~~l~i~V~G~f~e~~~~~~~~~~~~~~r~FsRtFiL 165 (205)
T 3nv0_A 86 EYFAANRASRISHGAMDIVVALSRLPATIHLMDTFVVDVFLVSATLLGFTLHGTFRDGPSAIKPENTEEHDNYFTRTFMV 165 (205)
T ss_dssp CTTTTSSCCSCEEHHHHHHHHHHHSCCEEECGGGCEEEEEEECSSCEEEEEEEEEEETHHHHSCCSCSTTCEEEEEEEEE
T ss_pred cccHHHHHHHHhhCHHHHHHHHHhCCCeEEecCceEEEEEEeCCCeEEEEEEEEEEEcccccccccCCCCCceeEEEEEE
Confidence 0 136999999999 222 3568999999999
Q ss_pred EeeC-CEEEEEcceEee
Q psy4124 78 KPLG-ASFYCQHDIFRL 93 (99)
Q Consensus 78 ~~~~-~~y~v~NDifR~ 93 (99)
.|.+ |+|+|.||++=+
T Consensus 166 ~P~~~g~~~I~ND~L~I 182 (205)
T 3nv0_A 166 APRGEGKVAIVSDQLFI 182 (205)
T ss_dssp EECSTTCEEEEEEEEEE
T ss_pred EECCCCcEEEEecEEEe
Confidence 9996 899999999843
No 13
>1q42_A MTR2, mRNA transport regulator MTR2; NTF2-fold, nuclear export, translation; 1.75A {Candida albicans} SCOP: d.17.4.2 PDB: 1q40_A
Probab=98.99 E-value=4.7e-11 Score=86.80 Aligned_cols=74 Identities=12% Similarity=0.145 Sum_probs=58.6
Q ss_pred CCCccHHHHHHHHHHHHHHhccCCCChh-----hhh------hhc----cCCCceeeEcCcee------ccHHHHHhhh-
Q psy4124 4 QLNPAYEAIGKGFVQQYYALFDDPAQRP-----NLI------NMY----NTETSFMTFEGIQL------QGAVKIMEKF- 61 (99)
Q Consensus 4 ~~~p~~~~ig~~FV~~YY~~~d~~~~r~-----~L~------~~Y----~~~~S~lt~eg~~~------~G~~~I~~kl- 61 (99)
-||.+..+.|+.|++.||..+| +.|. .|. ++| .++ |.++|||+.+ .|+++|.+++
T Consensus 20 ~mn~~~~r~aE~F~K~yyasLD--~~r~~~~~~ql~~v~~f~~ly~~~l~~~-a~liwNGnp~~~~~~~~gr~~fqk~w~ 96 (201)
T 1q42_A 20 HMNQDPTQQLEPFLKRFLASLD--LLYTQPTSQPFPNVESYATQLGSNLKRS-SAIIVNGQPIIPSPQEDCKLQFQKKWL 96 (201)
T ss_dssp ---CCGGGTHHHHHHHHHHHHS--CCCCCCTTCSSCCHHHHHTTTTTTEEEE-EEEEETTEECCCCSSCCHHHHHHHHHH
T ss_pred ccCCCcchhHHHHHHHHHHHhc--ccccccchhhccchhHHHHHhccccCCc-cEEEEcCcccccccccccHHHHHHHHH
Confidence 4567888999999999999999 6665 777 788 666 9999999999 9999999998
Q ss_pred -------------------------------hcCCCCCeeEEEEEEEEee
Q psy4124 62 -------------------------------NCDDDPPHAYSQIFVLKPL 80 (99)
Q Consensus 62 -------------------------------~~d~~~~~~F~QtF~L~~~ 80 (99)
+.||.+.++|-|+|.|..+
T Consensus 97 ~lP~SqHqL~SlDahpIpGq~T~lI~asGkVrFDesgr~~fgQsf~Lta~ 146 (201)
T 1q42_A 97 QTPLSSHQLTSYDGHLIPGTGTFVVHFSAKVRFDQSGRNRLGESADLFQE 146 (201)
T ss_dssp TSCCEEEEEEEEEEEEETTTTEEEEEEEEEEEEBCSSCCTTSCCC-----
T ss_pred hCCCcceeeeeeecceeCCCcEEEEEEeEEEEECCCCcCcCCCcEEEecc
Confidence 4678888899999999755
No 14
>1of5_B MTR2, YKL186C, mRNA transport regulator MTR2; nuclear protein, repeat, leucine- rich repeat, nuclear transport; 2.8A {Saccharomyces cerevisiae} SCOP: d.17.4.2
Probab=98.18 E-value=2e-06 Score=61.86 Aligned_cols=70 Identities=11% Similarity=0.114 Sum_probs=44.0
Q ss_pred cHHHHHHHHHHHHHHhccCCCCh-----hhhhhhccCCCceeeEcCceeccHHHHHhhh---------------------
Q psy4124 8 AYEAIGKGFVQQYYALFDDPAQR-----PNLINMYNTETSFMTFEGIQLQGAVKIMEKF--------------------- 61 (99)
Q Consensus 8 ~~~~ig~~FV~~YY~~~d~~~~r-----~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl--------------------- 61 (99)
.--+.++.||+.||..|| ..| .-|..|+.+. +.++++|+.+-+..+..+.+
T Consensus 14 ~~~~aae~FVk~~y~aLd--~~r~~~l~~~lssF~p~~-~~Ii~NG~p~a~p~~fqeiw~~Q~p~T~hel~S~D~HVIng 90 (184)
T 1of5_B 14 NQAQITATFTKKILAHLD--DPDSNKLAQFVQLFNPNN-CRIIFNATPFAQATVFLQMWQNQVVQTQHALTGVDYHAIPG 90 (184)
T ss_dssp CHHHHHHHHHHHHHHHHH--CCCCC-CHHHHTTBCSS--CCEEETTEEESCHHHHHHHHHHHSCCCEEEEEEEEEEEETT
T ss_pred cchhHHHHHHHHHHHHhc--ccccchhhhhhhhcCCCC-ceEEECCeEcCCHHHHHHHHHhcCCCceEEEEeEEEEEECC
Confidence 456899999999999999 666 6677777665 89999999998888888877
Q ss_pred ------------hcCCCCCeeEEEEEEEEee
Q psy4124 62 ------------NCDDDPPHAYSQIFVLKPL 80 (99)
Q Consensus 62 ------------~~d~~~~~~F~QtF~L~~~ 80 (99)
..||+..-+|.|+|+|.|.
T Consensus 91 sgsivv~VsgkVRFdEsgrd~fgEtfvLvpn 121 (184)
T 1of5_B 91 SGTLICNVNCKVRFDESGRDKMGQDATVPIQ 121 (184)
T ss_dssp TTEEEEEEEEEEECC----------------
T ss_pred CCeEEEEEEEEEEECCCCCCCCCCeEEECCC
Confidence 4555544589999999977
No 15
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=97.30 E-value=0.0023 Score=40.50 Aligned_cols=91 Identities=19% Similarity=0.241 Sum_probs=63.9
Q ss_pred CCCCCCccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCc-eeccHHHHHhhh------------------
Q psy4124 1 MSSQLNPAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGI-QLQGAVKIMEKF------------------ 61 (99)
Q Consensus 1 ~~~~~~p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~-~~~G~~~I~~kl------------------ 61 (99)
||..++.+..+ -.+.++.|+..++. .+.+.+..+|.++ ..+...|. .+.|.++|.+.+
T Consensus 2 m~~~~~~d~~~-i~~~~~~~~~a~~~-~D~~~~~~l~a~D-~v~~~~~~~~~~G~~ai~~~~~~~~~~~~~~~~~~~~~i 78 (135)
T 3d9r_A 2 MSKIFNEELAV-IEAAAIAYLTAFNR-ADIPAVIATYTDD-GVLMGPGRPAAVGKDELAEVYLSVFETVGFDMAYEIKEV 78 (135)
T ss_dssp --CCCSCHHHH-HHHHHHHHHHHHHT-TCHHHHHHTEEEE-EEEECTTSCCEESHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCccchHHHHH-HHHHHHHHHHHHhc-CCHHHHHHhcCCC-EEEECCCCCcccCHHHHHHHHHHHHhhcCCceeEEEEEE
Confidence 66667766555 45788999999985 5789999999998 77766554 567999998766
Q ss_pred hc-C------------------CCCCe--eEEEEEEEEee-CCEEEEEcceEeee
Q psy4124 62 NC-D------------------DDPPH--AYSQIFVLKPL-GASFYCQHDIFRLG 94 (99)
Q Consensus 62 ~~-d------------------~~~~~--~F~QtF~L~~~-~~~y~v~NDifR~~ 94 (99)
.+ + ++++. ...-+++++.+ +|+|.|..+.|..+
T Consensus 79 ~~~~gd~a~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~dG~W~i~~~~~s~~ 133 (135)
T 3d9r_A 79 VQTSADWAFVRSATEGTETNKATGVVTPAAYQELFLLRKSATGSWQTARYCTSKI 133 (135)
T ss_dssp EEEETTEEEEEEEEEEEEEETTTCCEEEEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred EEecCCEEEEEEEEEEEEecCCCCCceeecccEEEEEEecCCCcEEEEEEeeccc
Confidence 01 1 12222 24556778887 88999999888654
No 16
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=97.24 E-value=0.0013 Score=43.60 Aligned_cols=74 Identities=9% Similarity=0.144 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh-------------------------------
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF------------------------------- 61 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl------------------------------- 61 (99)
-.+.+..|+..++. .+.+.|..+|.++ ..+...|..+.|.++|.+.+
T Consensus 21 i~~l~~~y~~A~~~-~D~d~~~~lf~~D-a~~~~~g~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~A~v~ 98 (143)
T 4i4k_A 21 VAALPARIVAAWAD-HDADRFADVFAED-GTMILPGLFRKGRENIRTHMAAAFAGPYKGTRVIGSPIDARLLGDGIALLI 98 (143)
T ss_dssp HHTHHHHHHHHHHT-TCHHHHHTTEEEE-EEEEETTEEEESHHHHHHHHHHHHHTTTTTCEEEEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHhhcC-ceEEeCCCeecCHHHHHHHHHHHHhhcCCCCeEEeeeEEEEEcCCCEEEEE
Confidence 45788999999985 5789999999999 77788998899999998876
Q ss_pred -----hcCCC----CCeeEEEEEEEEeeCCEEEEEc
Q psy4124 62 -----NCDDD----PPHAYSQIFVLKPLGASFYCQH 88 (99)
Q Consensus 62 -----~~d~~----~~~~F~QtF~L~~~~~~y~v~N 88 (99)
..+++ +.+...+|+++...+|+|.|..
T Consensus 99 ~~~~~~~~g~~~~~~~~~~~~T~v~~r~~g~WrI~~ 134 (143)
T 4i4k_A 99 TEGGILAPGETEASGDGAVRASWLAVEQDGQWRLAA 134 (143)
T ss_dssp EEEEEECTTCSSCCGGGEEEEEEEEEEETTEEEEEE
T ss_pred eccceecCCCCCCCcccceEEEEEEEEECCcEEEEE
Confidence 11112 2355799999999999999876
No 17
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=96.74 E-value=0.0088 Score=39.91 Aligned_cols=80 Identities=8% Similarity=0.064 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh----------------------------
Q psy4124 10 EAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF---------------------------- 61 (99)
Q Consensus 10 ~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl---------------------------- 61 (99)
++.-.+.++.|+..++. .+.+.|..+|.++ ..+...|.+..|+++|.+.+
T Consensus 16 e~aI~~l~~~~~~A~~~-gD~~~l~al~a~D-~v~~~~g~~~~Gr~ai~a~~~~~~~~~~~~~~~~~~~i~v~GD~A~~~ 93 (139)
T 3rob_A 16 ELAIRTVQYRWLEATRK-FDRQVLSSLMTDD-VVFLTPGRLPFGKEEFLAACEQNDQRVIIEASATFEEIVIVEPMAYTR 93 (139)
T ss_dssp HHHHHHHHHHHHHHHHT-TCHHHHHHTEEEE-EEEECTTSCCBCHHHHHHHHHHHHHHEEEEEEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHc-CCHHHHHHHccCc-EEEECCCCCccCHHHHHHHHHHHHHhcCCCCceEEEEEEEcCCeEEEE
Confidence 45667889999999885 6899999999999 88888887777999998765
Q ss_pred ------hc--CCCCCeeEE--EEEEEEe-eCCEEEEEcceE
Q psy4124 62 ------NC--DDDPPHAYS--QIFVLKP-LGASFYCQHDIF 91 (99)
Q Consensus 62 ------~~--d~~~~~~F~--QtF~L~~-~~~~y~v~NDif 91 (99)
.. +++++..+. -+++|++ .+|.|.+.-|.=
T Consensus 94 ~~~~~~~t~~~~g~~~~~~g~~~~v~rK~~dG~W~i~~d~~ 134 (139)
T 3rob_A 94 THLHIKVTPRSGGAVRELAGHAMSIFRRSMFGEWQLARDAN 134 (139)
T ss_dssp EEEEEEEEETTSCCCEEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEEEEecCCCCceeEeeccEEEEEEECCCCcEEEEEEhh
Confidence 11 244555443 6678888 578899988863
No 18
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=96.69 E-value=0.0076 Score=40.28 Aligned_cols=78 Identities=9% Similarity=0.129 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCceee-EcCceeccHHHHHhhh------------------------------
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFMT-FEGIQLQGAVKIMEKF------------------------------ 61 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt-~eg~~~~G~~~I~~kl------------------------------ 61 (99)
-.+.+..|...++. .+.+.|..+|.++ ..+. ..|..+.|.++|.+.+
T Consensus 8 I~~l~~~~~~A~~~-~D~d~~~~lf~~D-a~~~~~~G~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~A~v 85 (146)
T 3gzr_A 8 IQALIQAYFTAWNT-NAPERFAEIFWPD-GSWVNVVGMHWRGRDQIVFAHTAFLKTIFKDCKQELVTIEARTIAPGSALA 85 (146)
T ss_dssp HHHHHHHHHHHHHT-TCGGGSGGGEEEE-EEEECTTCCEEESHHHHHHHHHHHHHTTTTTCCEEEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHc-CCHHHHHhhccCC-eEEEcCCCCeeeCHHHHHHHHHHHhhcccCCCEEEEeEEEEEEcCCCEEEE
Confidence 35788899999985 5889999999999 6654 7898899999998765
Q ss_pred ----hc-----CCCCC---eeEEEEEEEEeeCCEEEEEcceEe
Q psy4124 62 ----NC-----DDDPP---HAYSQIFVLKPLGASFYCQHDIFR 92 (99)
Q Consensus 62 ----~~-----d~~~~---~~F~QtF~L~~~~~~y~v~NDifR 92 (99)
.+ .++.+ ....+|++|...+|+|.|..+--.
T Consensus 86 ~~~~~l~g~~~~~G~~~~~~~~~~t~v~vr~dg~WrI~a~h~s 128 (146)
T 3gzr_A 86 VVTLIQDAYVTPDGRQMPRAHDRLTLLAVEREGVWRFIHGHNT 128 (146)
T ss_dssp EEEEEECCEECTTCCEECCEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEecceeCCCCCcCCccCcEEEEEEEEECCEEEEEEEecc
Confidence 11 12322 468899999999999999875443
No 19
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=96.50 E-value=0.014 Score=36.33 Aligned_cols=52 Identities=6% Similarity=0.120 Sum_probs=41.3
Q ss_pred cHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC-ceeccHHHHHhhh
Q psy4124 8 AYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG-IQLQGAVKIMEKF 61 (99)
Q Consensus 8 ~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg-~~~~G~~~I~~kl 61 (99)
+..+.-.+.++.|+..++. .+.+.|..+|.++ ..+...| ..+.|.++|.+.+
T Consensus 3 ~~~~~I~~~~~~~~~a~~~-~D~~~~~~l~a~D-a~~~~~~~~~~~G~~~i~~~~ 55 (129)
T 3hx8_A 3 SAKEAIEAANADFVKAYNS-KDAAGVASKYMDD-AAAFPPDMARVDGRQNIQKLW 55 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEECTTSCCEESHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHc-CCHHHHHHhhCCC-eEEeCCCCCcccCHHHHHHHH
Confidence 3455567889999999985 5789999999998 7765443 5789999998866
No 20
>3cu3_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Nostoc punctiforme} SCOP: d.17.4.28
Probab=96.20 E-value=0.014 Score=39.18 Aligned_cols=49 Identities=16% Similarity=0.284 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHhccCCCChhhhhhhccCCCceee-EcCceeccHHHHHhhh
Q psy4124 11 AIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMT-FEGIQLQGAVKIMEKF 61 (99)
Q Consensus 11 ~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt-~eg~~~~G~~~I~~kl 61 (99)
+.-.+.+..|+..++. .+.+.+..+|.++ ..+. ..|..+.|.++|.+.+
T Consensus 16 ~aI~~~~~~~~~A~~~-~D~d~~~~lfa~D-a~~~~~~g~~~~Gr~aI~~~~ 65 (172)
T 3cu3_A 16 SAIRAFHRQMIDAWNR-GSGEGFAAPFSET-ADFITFEGTHLKGRKEIAAFH 65 (172)
T ss_dssp HHHHHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEECTTCCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCHHHHHhhcCCC-eEEEeCCCCeEECHHHHHHHH
Confidence 3445789999999985 5889999999999 7776 4788999999998765
No 21
>3er7_A Uncharacterized NTF2-like protein; YP_001812677.1, NTF2-like protein of unknown function, struc genomics; HET: MSE; 1.50A {Exiguobacterium sibiricum 255-15} SCOP: d.17.4.24
Probab=95.67 E-value=0.024 Score=37.77 Aligned_cols=46 Identities=20% Similarity=0.376 Sum_probs=37.7
Q ss_pred HHHHHHHHhccC----CCChhhhhhhccCCCceeeEcCceeccHHHHHhhh
Q psy4124 15 GFVQQYYALFDD----PAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 15 ~FV~~YY~~~d~----~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
.=|++||...|. +.+.+.|..||.++ ..+..+|..+.|.++|.+.+
T Consensus 6 ~~v~ry~~~~d~~~~d~~d~~~l~~Lfa~D-av~~~~~~~~~G~~ai~~F~ 55 (131)
T 3er7_A 6 TTLDRYFDLFDASRTDEKAFDDLISLFSDE-ITFVLNGQEQHGIDAWKQFV 55 (131)
T ss_dssp CHHHHHHHHHHHTTTCHHHHHHHHHTEEEE-EEEEETTEEEESHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCccCHHHHHHHhCCC-eEecCCCCCcCChHHHHHHH
Confidence 458999999982 23478899999999 77766688899999999988
No 22
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=95.53 E-value=0.085 Score=33.86 Aligned_cols=54 Identities=15% Similarity=0.257 Sum_probs=38.7
Q ss_pred CccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeE-c-CceeccHHHHHhhh
Q psy4124 6 NPAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTF-E-GIQLQGAVKIMEKF 61 (99)
Q Consensus 6 ~p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~-e-g~~~~G~~~I~~kl 61 (99)
....++--.+.++.|+..++. .+.+.+..+|.++ ..+.- . +....|.++|.+.+
T Consensus 3 ~~~~~~~I~~l~~~~~~A~~~-~D~~~~~~l~a~D-~v~~~~~~~~~~~G~~air~~~ 58 (142)
T 3f7s_A 3 STAAESEIRQLIERWMQAVRD-RDIPGIIAPYADD-IVAFDAIQALQFKGKSAYTAHW 58 (142)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEECSSSSSCEESHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHHHHc-CCHHHHHhhcCCC-EEEecCCCCccccCHHHHHHHH
Confidence 334555567888999999885 6889999999988 54432 2 23567999887654
No 23
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=95.30 E-value=0.072 Score=35.44 Aligned_cols=75 Identities=11% Similarity=0.226 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCceee--Ec-CceeccHHHHHhhh----------------------------
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFMT--FE-GIQLQGAVKIMEKF---------------------------- 61 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt--~e-g~~~~G~~~I~~kl---------------------------- 61 (99)
..+-.+.||..|.. .|.+.|..+|.++ ..++ .. |..+.|.++|.+.+
T Consensus 10 ~~~~~~af~~A~~~-gD~da~~al~a~d-~~v~~v~p~g~~l~G~~ai~~~w~~~f~~~~~~~i~~~~v~v~~~gd~A~v 87 (144)
T 3gwr_A 10 PEAAEDAFYAAFEA-RSLDDMMAVWARD-DHVACIHPLAAPLNGRAAVAAGWRSMFGAAGRFRLQVKAVHEIRQADHVIR 87 (144)
T ss_dssp HHHHHHHHHHHHHH-TCHHHHHHHBCSS-SCCEEECTTCCCEESHHHHHHHHHHHHHHHCCEEEEEEEEEEEECSSEEEE
T ss_pred HHHHHHHHHHHHHc-CCHHHHHhhccCC-CCEEEECCCCCCcccHHHHHHHHHHHHcCCCcEEEEEEEEEEEecCCEEEE
Confidence 34556778888875 6889999999987 4333 33 46899999998866
Q ss_pred --------hcCCCCCeeEEEEEEEEeeCCEEEEEcc
Q psy4124 62 --------NCDDDPPHAYSQIFVLKPLGASFYCQHD 89 (99)
Q Consensus 62 --------~~d~~~~~~F~QtF~L~~~~~~y~v~ND 89 (99)
..+++++..+.-|.++.+.+|+|.|...
T Consensus 88 ~~~e~~~~~~~~g~~~~~r~T~V~~r~~g~Wrivhh 123 (144)
T 3gwr_A 88 IVDEFLTIGDETAPRPAILATNVYRREADGWRMVLH 123 (144)
T ss_dssp EEEEEEEETTCSSCCCCEEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEecCCCCceeeEEEEEEEEEECCEEEEEEE
Confidence 1122333457778888888888988653
No 24
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=94.99 E-value=0.26 Score=32.27 Aligned_cols=49 Identities=8% Similarity=0.150 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhccCCCChhhhhhhccCCCceee--EcCceeccHHHHHhhh
Q psy4124 11 AIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMT--FEGIQLQGAVKIMEKF 61 (99)
Q Consensus 11 ~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt--~eg~~~~G~~~I~~kl 61 (99)
+--.+.++.|+..++. .+.+.|..+|.++ ..+. ..|..+.|.++|.+.+
T Consensus 20 ~~I~~~~~~~~~A~~~-~D~~~l~~l~a~D-av~~~~~~~~~~~G~~~i~~~~ 70 (156)
T 3h51_A 20 REVAALFDTWNAALAT-GNPHKVADLYAPD-GVLLPTVSNEVRASREQIENYF 70 (156)
T ss_dssp HHHHHHHHHHHHHHHH-TCHHHHHTTEEEE-EEEECSSCSSCBCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCHHHHHhhcCCC-EEEecCCCCccccCHHHHHHHH
Confidence 4446777888888885 6889999999998 6554 2355689999998766
No 25
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=94.94 E-value=0.02 Score=36.29 Aligned_cols=49 Identities=12% Similarity=0.242 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc---------CceeccHHHHHhhh
Q psy4124 11 AIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE---------GIQLQGAVKIMEKF 61 (99)
Q Consensus 11 ~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e---------g~~~~G~~~I~~kl 61 (99)
+-.+++++.||..++. .+.+.|..+|.++ ..+.-. +..+.|.++|.+.+
T Consensus 8 ~~~~~~~~~~~~a~n~-~D~~~l~~l~a~D-~v~~~p~~~~~~g~~~~~~~G~~ai~~~~ 65 (122)
T 3h3h_A 8 AFAQQFSREWIDAWNA-HDLDAILSHYADG-FEMSSPMIVQIAGEPSGRLRGKEQVGAYW 65 (122)
T ss_dssp HHHHHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEECHHHHHHHC-CCCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-cCHHHHHHhcCCC-EEEECCCcccccCCCCCcEEcHHHHHHHH
Confidence 4567999999999985 5789999999998 776643 46899999999888
No 26
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=94.65 E-value=0.47 Score=30.07 Aligned_cols=77 Identities=12% Similarity=0.135 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHhccCCCChhhhhhhccCCCceee-EcCceeccHHHHHhhh-------------------hcCC----
Q psy4124 10 EAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMT-FEGIQLQGAVKIMEKF-------------------NCDD---- 65 (99)
Q Consensus 10 ~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt-~eg~~~~G~~~I~~kl-------------------~~d~---- 65 (99)
.+|...|.+ |-..++. .+.+.|..+|.++...+. ..|..+.|.++|.+ + .+++
T Consensus 14 ~ei~~~~~~-y~~A~~~-~D~~~l~~lf~~d~~~~~~~~~~~~~G~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~d~A~ 90 (129)
T 2rcd_A 14 ADVTAAFYR-YEKALTG-NDVAVLDELFWHDEKTVRYGAGENLYGIEEIRA-FRLARPSAGLDRALRNTVITTYGHDMAV 90 (129)
T ss_dssp HHHHHHHHH-HHHHHHT-TCHHHHHHHBCCSTTCEEEETTEEEESHHHHHH-HHHHSCCTTCCCEEEEEEEEEBTTSEEE
T ss_pred HHHHHHHHH-HHHHHhc-CCHHHHHHhccCCCCEEEECCCCccCCHHHHHH-HHHhcCCCCCceEEEEEEEEEecCcEEE
Confidence 344444443 3355553 788999999999833333 36778899999998 6 0111
Q ss_pred --------CCCeeEEEEEEEEeeCCEEEEEcc
Q psy4124 66 --------DPPHAYSQIFVLKPLGASFYCQHD 89 (99)
Q Consensus 66 --------~~~~~F~QtF~L~~~~~~y~v~ND 89 (99)
+.+....+|.++...+++|.|...
T Consensus 91 ~~~~~~~~~~~~~g~~t~v~~r~~~gWrIv~~ 122 (129)
T 2rcd_A 91 ASTEFTRTGSTKIGRQMQTWVKMPEGWRIVAA 122 (129)
T ss_dssp EEEEEECSSCCSCEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEcCCCCceeEEEEEEECCCcEEEEEE
Confidence 123445678888888888988754
No 27
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=94.56 E-value=0.09 Score=33.97 Aligned_cols=47 Identities=17% Similarity=0.313 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCcee-eEcCceeccHHHHHhhh
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFM-TFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~l-t~eg~~~~G~~~I~~kl 61 (99)
-.+.++.|+..++. .+.+.+..+|.++ ..+ .-+|..+.|.++|.+.+
T Consensus 5 I~~l~~~~~~A~~~-~D~d~~~~lfa~D-av~~~~~g~~~~G~~aI~~~~ 52 (142)
T 2gxf_A 5 LKDIISACDLAIQN-EDFDTLMNYYSED-AVLVVKPGMIARGKEEIKKAF 52 (142)
T ss_dssp HHHHHHHHHHHHHT-TCHHHHTTSEEEE-EEEECSSSCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHhcCCC-EEEEcCCCCcccCHHHHHHHH
Confidence 34668889999984 5789999999999 766 44688999999999876
No 28
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=94.43 E-value=0.053 Score=35.41 Aligned_cols=57 Identities=9% Similarity=0.050 Sum_probs=48.1
Q ss_pred CCCCccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCc----eeccHHHHHhhh
Q psy4124 3 SQLNPAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGI----QLQGAVKIMEKF 61 (99)
Q Consensus 3 ~~~~p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~----~~~G~~~I~~kl 61 (99)
+...+...++.++.++.|+..+.. .+.+.|..++.++ ..+.++|. .+.|+++|.+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~f~~A~~~-gD~~~l~~lla~D-~v~~~pg~~~~g~~~G~~~v~~~~ 64 (134)
T 3dmc_A 4 THYSDNTLKVAHQGFEFFTQGLAT-GEWQKFLDMLTED-FTFWFPMGEFHGLNVGKERAKEFF 64 (134)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHH-SCCHHHHTTEEEE-EEEEESSGGGBEEEESHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHc-CCHHHHHHHcCCC-EEEEecCCCCCccchhHHHHHHHH
Confidence 344667788999999999999874 5789999999999 88888886 688999998876
No 29
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=94.34 E-value=0.053 Score=35.41 Aligned_cols=48 Identities=8% Similarity=0.054 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHh
Q psy4124 10 EAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIME 59 (99)
Q Consensus 10 ~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~ 59 (99)
++...+-++.|+..+.. .|.+.|..+|.++ ..+...+..+.|.++|.+
T Consensus 29 ~~~i~~~~~~~~~A~~~-~D~~~l~~l~a~D-a~~~~~~g~~~g~~~~~~ 76 (148)
T 3bb9_A 29 DSAAGNVVKQFHAALQM-GNEAIVRQSLAAN-VQIYEGGKVERSLTEYAN 76 (148)
T ss_dssp TSHHHHHHHHHHHHHHH-TCHHHHHHHEEEE-EEEEETTEEECSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-CCHHHHHHhhCCC-eEEEeCCCccCCHHHHHH
Confidence 34456778888888874 6889999999998 766555555889999987
No 30
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=94.32 E-value=0.023 Score=35.58 Aligned_cols=49 Identities=16% Similarity=0.282 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC--ceeccHHHHHhhh
Q psy4124 11 AIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG--IQLQGAVKIMEKF 61 (99)
Q Consensus 11 ~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg--~~~~G~~~I~~kl 61 (99)
+..++.|+.|+..++. .+.+.|..+|.++ ..+...+ ..+.|.++|.+.+
T Consensus 7 ~~~~~~v~~~~~a~~~-~D~~~l~~l~a~D-~~~~~p~~~~~~~G~~~i~~~~ 57 (131)
T 1oh0_A 7 QEVQGLMARYIELVDV-GDIEAIVQMYADD-ATVEDPFGQPPIHGREQIAAFY 57 (131)
T ss_dssp HHHHHHHHHHHHHHHH-TCHHHHHHHEEEE-EEEESSTTSCCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CCHHHHHHHcCCC-EEEEcCCCCCCcccHHHHHHHH
Confidence 4457788999999984 4789999999998 7777654 4899999999877
No 31
>3b7c_A Uncharacterized protein; NTF-2 like protein, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.70A {Shewanella oneidensis} SCOP: d.17.4.16
Probab=93.41 E-value=0.86 Score=28.58 Aligned_cols=46 Identities=9% Similarity=0.154 Sum_probs=32.4
Q ss_pred HHHHHHHHHhccCCCChhhhhhhc--cCCCceeeEcCceeccHHHHHhhh
Q psy4124 14 KGFVQQYYALFDDPAQRPNLINMY--NTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 14 ~~FV~~YY~~~d~~~~r~~L~~~Y--~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
.+-++.+|..++. .|.+.+..+| .++ ..+.-.|....|.++|.+.+
T Consensus 8 ~~~~~~~~~A~~~-~D~~~~~~~y~~~~d-~~~~~~~~~~~G~~~i~~~~ 55 (122)
T 3b7c_A 8 VQLLKGQEEAWNR-GDLDAYMQGYWQNEQ-LMLISNGKFRNGWDETLAAY 55 (122)
T ss_dssp HHHHHHHHHHHHT-TCHHHHHTTBCCSTT-CEEECSSCEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHhhcCCCC-EEEECCCccccCHHHHHHHH
Confidence 3456666666664 7899999999 555 44443444789999998765
No 32
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=93.08 E-value=0.13 Score=32.80 Aligned_cols=48 Identities=10% Similarity=0.313 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc----Cc--eeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE----GI--QLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e----g~--~~~G~~~I~~kl 61 (99)
-..+.|+.||..++. .+.+.|..+|.++ ..+... |. .+.|.++|.+.+
T Consensus 11 ~~~~~v~~~~~a~~~-~D~~~l~~l~a~D-~~~~~p~~~~g~~~~~~G~~~i~~~~ 64 (150)
T 1s5a_A 11 KACETLRKFMAYMLE-KDMKSWTELWDEN-AVFEFPYAPEGSPKRIEGKAAIYDYI 64 (150)
T ss_dssp HHHHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEECTTCCTTSCSEEESHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc-CCHHHHHHhCCCC-EEEEeecCCCCCCccccCHHHHHHHH
Confidence 456788889998874 5789999999998 777764 42 589999999877
No 33
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=92.66 E-value=0.13 Score=34.11 Aligned_cols=53 Identities=15% Similarity=0.309 Sum_probs=39.5
Q ss_pred CCCCccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc----C--ceeccHHHHHhhh
Q psy4124 3 SQLNPAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE----G--IQLQGAVKIMEKF 61 (99)
Q Consensus 3 ~~~~p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e----g--~~~~G~~~I~~kl 61 (99)
+||..+. .+-|+.||..++. .+.+.|..+|.++ ..+... | ..+.|.++|.+.+
T Consensus 19 ~mm~~~~----~~~v~~~~~a~~~-~D~~~l~~l~a~D-~v~~~P~~~~g~~~~~~G~~ai~~~~ 77 (163)
T 1z1s_A 19 FQGHMNA----KEILVHSLRLLEN-GDARGWCDLFHPE-GVLEFPYAPPGWKTRFEGRETIWAHM 77 (163)
T ss_dssp SCCCCCH----HHHHHHHHHHHHT-TCHHHHHHTEEEE-EEEECSSCCTTSCCEEESHHHHHHTT
T ss_pred ccCchhH----HHHHHHHHHHHHC-CCHHHHHHHCCCC-EEEECcCCCCCCCcccCCHHHHHHHH
Confidence 4444444 4457888888884 4779999999999 777654 2 2489999999887
No 34
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=92.39 E-value=0.18 Score=33.33 Aligned_cols=48 Identities=8% Similarity=0.082 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC--ceeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG--IQLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg--~~~~G~~~I~~kl 61 (99)
...+.++.||..+.. .+.+.|..+|.++ ..++-.. ..+.|.++|.+.+
T Consensus 10 ~~~~~~~~~~~a~~~-~D~~~l~~l~a~D-~v~~~P~~~~~~~G~~~v~~~~ 59 (143)
T 3mso_A 10 NAAATLAEWHGLIAR-RDLSGLPRLLHPD-AVFRSPMAHKPYAGAPVVSMIL 59 (143)
T ss_dssp HHHHHHHHHHHHHHT-TCCTTGGGGEEEE-EEEECSSCSSCEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc-CCHHHHHHhcCCC-EEEECCCCCCCccCHHHHHHHH
Confidence 467889999998874 5789999999998 7776543 6899999999887
No 35
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=92.35 E-value=0.11 Score=31.49 Aligned_cols=48 Identities=15% Similarity=0.252 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc--CceeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE--GIQLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e--g~~~~G~~~I~~kl 61 (99)
...+.|+.||..++. .+.+.|..+|.++ ..+... +..+.|.++|.+.+
T Consensus 6 ~~~~~v~~~~~a~~~-~D~~~~~~l~a~D-~~~~~~~~~~~~~G~~~i~~~~ 55 (125)
T 1ohp_A 6 HMTAVVQRYVAALNA-GDLDGIVALFADD-ATVENPVGSEPRSGTAAIREFY 55 (125)
T ss_dssp HHHHHHHHHHHHHHH-TCHHHHHTTEEEE-EEEESSTTSCCEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCHHHHHHHcCCC-eEEECCCCCCCccCHHHHHHHH
Confidence 457788999999884 5789999999998 777665 35899999999887
No 36
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=91.79 E-value=0.35 Score=30.94 Aligned_cols=47 Identities=9% Similarity=0.186 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC-ceeccHHHHHhhh
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG-IQLQGAVKIMEKF 61 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg-~~~~G~~~I~~kl 61 (99)
.++.|+.||..++. .+.+.|..+|.++ ..+...| ..+.|.++|.+.+
T Consensus 24 ~~~~v~~~~~a~~~-~D~~~l~~l~a~D-~~~~~~~~~~~~G~~~i~~~~ 71 (149)
T 1nww_A 24 DEKIVLEFMDALTS-NDAAKLIEYFAED-TMYQNMPLPPAYGRDAVEQTL 71 (149)
T ss_dssp HHHHHHHHHHHGGG-CCHHHHHTTBCSS-CEEEETTSCCEESHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-CCHHHHHHHhCCC-EEEEcCCCCCccCHHHHHHHH
Confidence 45678888888874 4789999999999 8877766 4689999998877
No 37
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=91.72 E-value=0.23 Score=31.44 Aligned_cols=49 Identities=10% Similarity=0.204 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc-----CceeccHHHHHhhh
Q psy4124 11 AIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE-----GIQLQGAVKIMEKF 61 (99)
Q Consensus 11 ~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e-----g~~~~G~~~I~~kl 61 (99)
+-.++.|+.||..++. .+.+.|..+|.++ ..+... |..+.|.++|.+.+
T Consensus 17 ~~~~~~v~~~~~a~~~-~D~~~l~~l~a~D-~v~~~p~~~~~g~~~~G~~~i~~~~ 70 (129)
T 3fh1_A 17 EQTAEIMRRFNDVFQL-HDPAALPELIAEE-CVIENTVPAPDGARHAGRQACVQLW 70 (129)
T ss_dssp HHHHHHHHHHHHHHHT-TCGGGHHHHEEEE-EEEECSCSTTTCCEEESHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHc-cCHHHHHHhcCCC-EEEECCCCCCCCCcccCHHHHHHHH
Confidence 4567889999998874 5789999999998 777663 45789999999877
No 38
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=91.37 E-value=0.18 Score=31.87 Aligned_cols=48 Identities=17% Similarity=0.335 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc-CceeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE-GIQLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e-g~~~~G~~~I~~kl 61 (99)
-.++.|+.||..++. .+.+.|..+|.++ ...... |..+.|.++|.+.+
T Consensus 9 ~~~~~v~~~~~a~~~-~D~~~~~~l~a~D-~~~~~p~~~~~~G~~~~~~~~ 57 (140)
T 3i0y_A 9 RATGLVQAYYEAFNR-GDWDAMLAFLAED-VAHDLNQGPREIGRAAFASFL 57 (140)
T ss_dssp HHHHHHHHHHHHHHH-TCHHHHHHTEEEE-EEEECTTSCEEESHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCHHHHHHHcCCc-EEEEcCCCCceEcHHHHHHHH
Confidence 356788999998874 5789999999998 665554 56899999998876
No 39
>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} SCOP: d.17.4.25
Probab=91.13 E-value=0.34 Score=32.01 Aligned_cols=48 Identities=10% Similarity=0.232 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
.-.+++..|+..+|. .+.+.+..+|.++ ..+...|..+.|.++|.+.+
T Consensus 15 ~I~~l~~~y~~a~D~-~D~~~~~~lf~~D-a~~~~~g~~~~G~~~i~~~~ 62 (170)
T 2chc_A 15 RIQALCARYCLTINT-QDGEGWAGCFTED-GAFEFDGWVIRGRPALREYA 62 (170)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHTTEEEE-EEEEETTEEEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CCHHHHHhcccCc-EEEEeCCCCcCCHHHHHHHH
Confidence 345899999999995 5778999999999 88888888889999998876
No 40
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=91.13 E-value=0.14 Score=33.36 Aligned_cols=46 Identities=17% Similarity=0.200 Sum_probs=37.8
Q ss_pred HHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCc--------eeccHHHHHhhh
Q psy4124 14 KGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGI--------QLQGAVKIMEKF 61 (99)
Q Consensus 14 ~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~--------~~~G~~~I~~kl 61 (99)
+++|+.||..+++ .+.+.|..+|.++ ...+-.|. ...|+++|.+.+
T Consensus 7 ~~~v~~~~~a~~~-gD~~~l~~l~a~D-v~~~~~g~~~~~p~~g~~~G~~av~~~~ 60 (143)
T 3dm8_A 7 WRFSRALHRALND-RQTEELATIIDDN-IDWAIYGPIDMFPFFGARQGKAAVLEVC 60 (143)
T ss_dssp HHHHHHHHHHHHH-CCCHHHHHHEEEE-EEEEEESCTTTCTTCEEEESHHHHHHHH
T ss_pred HHHHHHHHHHHHC-CCHHHHHHhcCCC-eEEEecCCCCcCCCCccccCHHHHHHHH
Confidence 7899999999985 4789999999998 66665553 478999998877
No 41
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=90.61 E-value=0.25 Score=31.88 Aligned_cols=48 Identities=4% Similarity=0.083 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC--ceeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG--IQLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg--~~~~G~~~I~~kl 61 (99)
-.++-|+.||..+.. .+.+.|..||.++ ..+.|+. ..+.|.++|.+.+
T Consensus 6 ~~~~~v~~~~~a~~~-~D~~~l~~llaeD-~v~~~P~~~~~~~Gr~~~~~~~ 55 (128)
T 3en8_A 6 KIREALNAHWQASAA-GDFDAEHDIYDDD-AICDYPQSGERILGRMNLQALR 55 (128)
T ss_dssp HHHHHHHHHHHHHHH-TCHHHHTTTEEEE-EEEEETTTTEEEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHhcCCC-EEEECCCCCCEEECHHHHHHHH
Confidence 356788999998874 5789999999999 8888863 5789999999876
No 42
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=90.29 E-value=0.3 Score=31.01 Aligned_cols=45 Identities=16% Similarity=0.047 Sum_probs=34.1
Q ss_pred HHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC-----ceeccHHHHHhh
Q psy4124 14 KGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG-----IQLQGAVKIMEK 60 (99)
Q Consensus 14 ~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg-----~~~~G~~~I~~k 60 (99)
.+-|+.||..+.. .+.+.|..+|.++ ....-.+ ..+.|.++|.+.
T Consensus 15 ~~~v~~~~~a~~~-gD~~~~~~l~a~D-~~~~~~~~~p~~g~~~G~~~i~~~ 64 (140)
T 3ec9_A 15 YQIVADHYAASDR-HDPAAMMADIAPA-IEWTEMAGFPCAGTYRSADEIVRN 64 (140)
T ss_dssp HHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEEECTTSTTCEEECSHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCHHHHHHhcCCC-eEEEEcCCCccceEEcCHHHHHHH
Confidence 4567888888874 5789999999998 6665554 367899999743
No 43
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=90.18 E-value=2.4 Score=27.57 Aligned_cols=45 Identities=13% Similarity=0.152 Sum_probs=36.9
Q ss_pred HHHHHHHHhccCCCChhhhhhhccCCCceeeE--cCceeccHHHHHhhh
Q psy4124 15 GFVQQYYALFDDPAQRPNLINMYNTETSFMTF--EGIQLQGAVKIMEKF 61 (99)
Q Consensus 15 ~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~--eg~~~~G~~~I~~kl 61 (99)
+.|+.|+..++. .+.+.|..+|.++ ..+.- .|..+.|.++|.+.+
T Consensus 29 eiv~~y~~A~n~-~D~d~~~~l~a~D-~v~~d~~~g~~~~Greai~~~~ 75 (158)
T 4h3u_A 29 EIVTAWAAAWTG-TNPNALGTLFAAD-GTYVDHAIGATMTGREQISGWK 75 (158)
T ss_dssp HHHHHHHHHHHS-SCHHHHHTTEEEE-EEEEETTTTEEEESHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHHhccc-ceEeccCCCceEecchhhhhhh
Confidence 578899999885 5899999999998 66553 356799999998877
No 44
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=90.16 E-value=0.2 Score=33.00 Aligned_cols=47 Identities=17% Similarity=0.434 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCceeeE-cCceeccHHHHHhhh
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFMTF-EGIQLQGAVKIMEKF 61 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~-eg~~~~G~~~I~~kl 61 (99)
.++.|+.||..++. .+.+.|..+|.++ ..+.. .|..+.|+++|.+.+
T Consensus 22 ~~~lv~~~~~a~~~-~D~~~l~~l~a~D-~v~~~p~g~~~~G~e~i~~~~ 69 (151)
T 3f7x_A 22 ATELVNAYYAAFNA-GDMPAFLALLSED-VIHDINQGERQMGKARFAAFM 69 (151)
T ss_dssp HHHHHHHHHHHHHH-TCHHHHHHTEEEE-EEEECTTSCEEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHhcCCC-EEEECCCCCCcCCHHHHHHHH
Confidence 46788999998873 5789999999999 76644 467899999999877
No 45
>2owp_A Hypothetical protein BXE_B1374; cystatin-like fold, DUF3225 family protein, structural genom joint center for structural genomics, JCSG; 2.00A {Burkholderia xenovorans} SCOP: d.17.4.18
Probab=90.02 E-value=2.1 Score=27.67 Aligned_cols=50 Identities=12% Similarity=0.124 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc-CceeccHHHHHhhh
Q psy4124 10 EAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE-GIQLQGAVKIMEKF 61 (99)
Q Consensus 10 ~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e-g~~~~G~~~I~~kl 61 (99)
.+|-..|.+.+-.+.. .+.+.|..+|.++...+.+. |..+.|.++|.+..
T Consensus 11 ~eI~~~~~~y~~Al~~--~D~~~L~~lf~~d~~~v~~~~g~~l~G~~~I~a~r 61 (129)
T 2owp_A 11 AQVQAAFVEYERALVE--NDIEAMNALFWHTPETVRYGIAEVQHGGEAIRAWR 61 (129)
T ss_dssp HHHHHHHHHHHHHHHH--TCHHHHHHTBCCSTTCEEECSSCEEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh--CCHHHHHhhccCCCcEEEeCCCCccCCHHHHHHHH
Confidence 4566566555555555 78999999999983335454 56789999999844
No 46
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=89.59 E-value=0.14 Score=32.50 Aligned_cols=47 Identities=11% Similarity=0.123 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc-C-ce-------eccHHHHHhhh
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE-G-IQ-------LQGAVKIMEKF 61 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e-g-~~-------~~G~~~I~~kl 61 (99)
..+.++.||..++. .+.+.+..+|.++ ..+... | .. +.|.++|.+.+
T Consensus 9 ~~~~v~~~~~a~~~-~D~~~~~~l~a~D-~v~~~p~~~~~~~~~g~~~~G~~ai~~~~ 64 (139)
T 2a15_A 9 ALIASQSSWRCVQA-HDREGWLALMADD-VVIEDPIGKSVTNPDGSGIKGKEAVGAFF 64 (139)
T ss_dssp HHHHHHHHHHHHHT-TCHHHHHHTEEEE-EEEESSSSSBTTBTTSSCEESHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-CCHHHHHHhcCCC-EEEECCCCCCccCCCCceeecHHHHHHHH
Confidence 45677889999984 5789999999998 766543 2 22 79999999887
No 47
>3b8l_A Uncharacterized protein; putative aromatic ring hydroxylase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.75A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=89.07 E-value=3.3 Score=26.89 Aligned_cols=51 Identities=14% Similarity=0.269 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc--C-ceeccHHHHHhhh
Q psy4124 10 EAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE--G-IQLQGAVKIMEKF 61 (99)
Q Consensus 10 ~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e--g-~~~~G~~~I~~kl 61 (99)
.+.-.+++..|...+|.+.+.+.+..+|.++ ..+... | ..+.|.++|.+.+
T Consensus 27 ~~~I~~l~~~y~~alD~~~D~d~~~~lfteD-a~~~~~~~g~~~~~G~~~i~~~~ 80 (163)
T 3b8l_A 27 RLAIQDLMIAYAHAVDTVSDIDAVLDVFTED-AVFDLSGIGLTPQVGHAGIREFF 80 (163)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHTTEEEE-EEEECGGGTCCCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCCCHHHHHhhcCCC-EEEEecCCCCCCccCHHHHHHHH
Confidence 3455689999999999423778999999999 777654 2 2689999998766
No 48
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=88.85 E-value=0.96 Score=31.24 Aligned_cols=47 Identities=11% Similarity=0.116 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCce-----------------eeEc-CceeccHHHHHhhh
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSF-----------------MTFE-GIQLQGAVKIMEKF 61 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~-----------------lt~e-g~~~~G~~~I~~kl 61 (99)
-.+-...||..+.. .+.+.|..+|.++ .. ..+. |..+.|.++|.+.+
T Consensus 14 I~~~~~~~~~A~~~-gD~~~l~alwa~d-~~~~~~~~~~~~~~~~~v~~v~Pg~~~l~G~~~I~~~~ 78 (170)
T 3cnx_A 14 VGLANTAFYEAMER-GDFETLSSLWLTP-ADLGVDEEYHDPADAGVVSCVHPGWPVLSGRGEVLRSY 78 (170)
T ss_dssp HHHHHHHHHHHHHT-TCHHHHHHHBCCH-HHHTC------CCCTTCCEEECTTCCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHhhcCC-cccccccccccccccccEEEEcCCCccccCHHHHHHHH
Confidence 34667778888874 6889999999987 32 2345 47799999999776
No 49
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=88.59 E-value=0.45 Score=34.95 Aligned_cols=50 Identities=12% Similarity=0.127 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc--CceeccHHHHHhhh
Q psy4124 10 EAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE--GIQLQGAVKIMEKF 61 (99)
Q Consensus 10 ~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e--g~~~~G~~~I~~kl 61 (99)
++-.++.|+.||..++. .+.+.|..+|.++ ..+..+ +..+.|.++|.+.+
T Consensus 137 ~~~~~~~v~~~~~a~~~-~D~~~l~~l~a~D-~v~~~P~~~~~~~G~~ai~~~~ 188 (283)
T 3rga_A 137 EERRKELAREHCLRIND-GDVDGLLKLYSPR-IRFEDPVGSWTRTGLEALRAHA 188 (283)
T ss_dssp HHHHHHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEESSTTSCEEESHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHc-CCHHHHHHhcCCC-eEEECCCCCCcccCHHHHHHHH
Confidence 45677899999999985 6889999999999 777755 35789999999988
No 50
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=88.31 E-value=1.7 Score=27.50 Aligned_cols=48 Identities=8% Similarity=-0.082 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeE---cCceeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTF---EGIQLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~---eg~~~~G~~~I~~kl 61 (99)
--.+..+.++..+.. .+.+.+..+|.++ ..+.- .|..+.|.++|.+.+
T Consensus 14 ~I~~l~~~~~~A~~~-~D~~~~~~l~a~d-~~~~~~~~~g~~~~G~~~~r~~~ 64 (143)
T 2ux0_A 14 EIIKITEQLIEAINN-GDFEAYTKICDPG-LTSFEPEALGNLVEGMDFHKFYF 64 (143)
T ss_dssp HHHHHHHHHHHHHHH-TCHHHHHHHEEEE-EEEECGGGTTCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHhcCCC-cEEEeccCCCcEEEcHHHHHHHH
Confidence 344667778887764 6899999999988 54432 367889999988644
No 51
>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=86.98 E-value=0.63 Score=29.90 Aligned_cols=48 Identities=15% Similarity=0.232 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCcee-ccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQL-QGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~-~G~~~I~~kl 61 (99)
--.+++..|...+|. .+.+.+..+|.++ ..+...+..+ .|.++|.+.+
T Consensus 20 ~I~~l~~~y~~a~D~-~d~~~~~~lf~~D-a~~~~~~g~~~~G~~~i~~~~ 68 (155)
T 2rfr_A 20 EIRELIARYGPLADS-GDAEALSELWVED-GEYAVVGFATAKGRAAIAALI 68 (155)
T ss_dssp HHHHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEEETTSCCEESHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-CCHHHHHhhcCCc-eEEEcCCCccccCHHHHHHHH
Confidence 345889999999994 4778999999999 8887776566 9999998655
No 52
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=86.52 E-value=0.8 Score=28.89 Aligned_cols=47 Identities=11% Similarity=0.131 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
.++-|+.||..+.+ .+.+.|..+..|+ ..++.+|-.+.|.+++.+.+
T Consensus 8 ~~~~v~~f~~A~~~-gD~~~l~~lla~D-vv~~~~~g~~~G~~~v~~~~ 54 (114)
T 3f40_A 8 TRDLVLEFIHALNT-ENFPAAKKRLNEN-FTFNGPMGHREGSERYMNDM 54 (114)
T ss_dssp HHHHHHHHHHHHHT-TCHHHHHHTEEEE-EEEEETTEEEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHhcCCC-eEEECCCCcccCHHHHHHHH
Confidence 34667777888875 5789999999999 88888888899999998877
No 53
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=86.20 E-value=0.78 Score=28.30 Aligned_cols=46 Identities=4% Similarity=0.040 Sum_probs=35.6
Q ss_pred HHHHHHHHHhccCCCChhhhhhhccCCCceeeEc--CceeccHHHHHhhh
Q psy4124 14 KGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE--GIQLQGAVKIMEKF 61 (99)
Q Consensus 14 ~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e--g~~~~G~~~I~~kl 61 (99)
.+.|+.||..++. .+.+.+..+|.++ ...... +....|.++|.+.+
T Consensus 5 ~~~v~~~~~a~n~-~D~~~~~~~~a~D-~v~h~~~~~~~~~G~~~~~~~~ 52 (117)
T 3ff2_A 5 LETAKAMIAAYNA-QDVDTYVSYMTDD-ACEANYRGDVVREGKEGTRSGL 52 (117)
T ss_dssp HHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEEETTSCEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHcc-cCHHHHHHhcCCc-EEEEeCCCCccccCHHHHHHHH
Confidence 4678999999984 5789999999987 444332 45689999999877
No 54
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=86.17 E-value=4.9 Score=25.68 Aligned_cols=79 Identities=9% Similarity=0.209 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCceee--EcCc-eec-cHHHHHhhh-------------------------hc
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFMT--FEGI-QLQ-GAVKIMEKF-------------------------NC 63 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt--~eg~-~~~-G~~~I~~kl-------------------------~~ 63 (99)
-.+-++.|..-++. .+.+.|.+.|.|+ ..+. .+|. ... ..++..+.+ .+
T Consensus 14 I~~~l~~y~~g~~~-~D~~~l~~~f~pd-a~~~~~~~G~~l~~~~~~e~~~~v~~~~p~~~~~~~I~~I~i~gd~A~a~v 91 (125)
T 3duk_A 14 ITEVLNVYMNAAES-GTGEEMSAAFHKD-ATIFGYVGDKLAFNGPIKDLYDWHNSNGPAKNVQSRITNIDIVGTVAHARV 91 (125)
T ss_dssp HHHHHHHHHHHHHH-CCHHHHGGGEEEE-EEEEEEETTEEEEEEETHHHHHHHHHHCCCTTCEEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHh-cCHHHHHHhCCCC-cEEEEEcCCCEEeeCCHHHHHHHHhccCCCCcccceEEEEEEECCEEEEEE
Confidence 34567889998884 5789999999999 7763 3555 212 222322222 11
Q ss_pred --CCCCCeeEEEEEEEEeeCCEEEEEcceEee
Q psy4124 64 --DDDPPHAYSQIFVLKPLGASFYCQHDIFRL 93 (99)
Q Consensus 64 --d~~~~~~F~QtF~L~~~~~~y~v~NDifR~ 93 (99)
..-+...|+-.|.|.+.+|+|-|.|=+|+.
T Consensus 92 ~~~~~~~~~f~D~l~L~k~dg~WkIv~K~~~~ 123 (125)
T 3duk_A 92 EAENWTNFKFSDLFLLLKLDGKWTIVNKVFHL 123 (125)
T ss_dssp EEECSSSCCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEcCCCeEEEEEEEEEeCCEEEEEEEEEEe
Confidence 112346899999999999999999988864
No 55
>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*
Probab=86.06 E-value=0.55 Score=33.19 Aligned_cols=48 Identities=17% Similarity=0.198 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc----Cc--eeccHHHHHhhh
Q psy4124 11 AIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE----GI--QLQGAVKIMEKF 61 (99)
Q Consensus 11 ~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e----g~--~~~G~~~I~~kl 61 (99)
+--.+=|++|...+. ++++.+..||.++ ..+.+. |. .+.|+++|.+.+
T Consensus 41 ~~nr~vV~~yl~~~~--~D~~~~~eLfAeD-av~e~P~~~~G~P~r~~GReai~~~~ 94 (185)
T 3jum_A 41 QHNRKIVEQYMHTRG--EARLKRHLLFTED-GVGGLWTTDSGQPIAIRGREKLGEHA 94 (185)
T ss_dssp HHHHHHHHHHHHCCG--GGGGGGGGGEEEE-EEEEESCCTTSSCEEEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc--cCHHHHHHhCCCC-EEEEecCCCCCCCccccCHHHHHHHH
Confidence 334577999999999 8999999999999 888773 32 489999999987
No 56
>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19
Probab=85.62 E-value=0.6 Score=29.55 Aligned_cols=47 Identities=15% Similarity=0.138 Sum_probs=35.5
Q ss_pred HHHHHHHHHhccCC-C--ChhhhhhhccCCCceeeEcCceeccHHHHHhhh
Q psy4124 14 KGFVQQYYALFDDP-A--QRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 14 ~~FV~~YY~~~d~~-~--~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
++.|+.|...++.. . +++.|..+|.++ ..++-+-..+.|.++|.+.+
T Consensus 6 ~~~v~ry~~aw~~~d~~~~~~~l~~l~a~D-~~~~dP~~~~~G~~ai~~~~ 55 (121)
T 3dxo_A 6 LTIAQTYLAAWNEEDNERRRHLVGQAWAEN-TRYVDPLMQGEGQQGIAAMI 55 (121)
T ss_dssp HHHHHHHHHHHHCSCHHHHHHHHHHHEEEE-EEEECSSCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHhcCCC-eEEECCCCCcCCHHHHHHHH
Confidence 45677777777632 1 135799999998 88877666799999999887
No 57
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=85.56 E-value=0.83 Score=28.57 Aligned_cols=43 Identities=9% Similarity=0.149 Sum_probs=34.0
Q ss_pred HHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh
Q psy4124 14 KGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 14 ~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
++.|+.||..++. .+.+.+..+|.++ .+|.| ...|.+++.+.+
T Consensus 6 ~~~v~~~~~~~~~-~d~~~~~~~~a~d---~~~~~-~~~G~~~~~~~~ 48 (128)
T 3ehc_A 6 NDIYLAYLDSLNH-QAFDELGTFVDDN---VEHNG-RPFGLSGYRDML 48 (128)
T ss_dssp HHHHHHHHHHHHT-TCGGGGGGTEEEE---EEETT-BCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CCHHHHHHhcCcc---eEeCC-CCCCHHHHHHHH
Confidence 5778889998874 4678999999977 35667 679999988766
No 58
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=85.06 E-value=0.8 Score=28.37 Aligned_cols=47 Identities=11% Similarity=0.111 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCceee-EcC-ceeccHHHHHhhh
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFMT-FEG-IQLQGAVKIMEKF 61 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt-~eg-~~~~G~~~I~~kl 61 (99)
..+.|+.||..++. .+.+.+..+|.++ ..+. ..| ....|.++|.+.+
T Consensus 5 ~~~~v~~~~~a~n~-~D~~~~~~~~a~D-~~~~~~~g~~~~~G~~ai~~~~ 53 (123)
T 2k54_A 5 IELPVQKQLEAYNA-RDIDAFMAWWADD-CQYYAFPATLLAGNAAEIRVRH 53 (123)
T ss_dssp HHHHHHHHHHHHHH-TCHHHHHHTEEEE-EEEEETTTEEEEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-cCHHHHHhhcCCc-eEEEcCCCCcccCCHHHHHHHH
Confidence 35678889999874 4779999999998 6554 445 3589999999888
No 59
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=84.35 E-value=0.77 Score=33.67 Aligned_cols=48 Identities=6% Similarity=0.220 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc--CceeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE--GIQLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e--g~~~~G~~~I~~kl 61 (99)
-.++.|+.|+..++. .+.+.|..+|.++ ..+..+ +..+.|.++|.+.+
T Consensus 7 ~~~~~v~~~~~~~~~-~D~~~l~~l~a~D-av~~~P~~~~~~~Gr~ai~~~~ 56 (283)
T 3rga_A 7 VRKEVALEYCRRVNA-GELEGVLQLFAPD-ARLVDPLGTEPVVGRAALAARL 56 (283)
T ss_dssp HHHHHHHHHHHHHHH-TCHHHHHHTEEEE-EEEECSSSSCCEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc-CCHHHHHHhcCCC-EEEECCCCCCCcCcHHHHHHHH
Confidence 356789999999874 5889999999999 887765 44789999999888
No 60
>3mg1_A OCP, orange carotenoid protein; carotenoid binding protein, echinone, phycobilisome; HET: ECH; 1.65A {Synechocystis SP} PDB: 3mg2_A* 3mg3_A* 1m98_A*
Probab=83.78 E-value=1.8 Score=33.36 Aligned_cols=47 Identities=15% Similarity=0.383 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceee--EcCceeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMT--FEGIQLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt--~eg~~~~G~~~I~~kl 61 (99)
|.+.=|..|...|+. .+-+.+..||.++ ..|. ++ .++.|+++|...+
T Consensus 193 i~~~tVl~Y~e~lNa-~Df~a~aaLFA~D-g~LepPf~-~PIvGreAI~~y~ 241 (323)
T 3mg1_A 193 VTNATVLNYMDNLNA-NDFDTLIELFTSD-GALQPPFQ-RPIVGKENVLRFF 241 (323)
T ss_dssp BCCHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEECTTS-CCEESHHHHHHHH
T ss_pred cchHHHHHHHHHhcc-cCHHHHHHHccCC-CeeCCCCC-CCccCHHHHHHHH
Confidence 445668999999994 5789999999998 7776 45 8999999999998
No 61
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=83.50 E-value=1.1 Score=28.87 Aligned_cols=49 Identities=6% Similarity=0.096 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC-ceeccHHHHHhhh
Q psy4124 11 AIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG-IQLQGAVKIMEKF 61 (99)
Q Consensus 11 ~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg-~~~~G~~~I~~kl 61 (99)
+-.++.|+.||..++. .+.+.|..+|.++ ..+.-.| ..+.|.++|.+.+
T Consensus 15 ~~~~~~v~~f~~a~~~-gD~~~l~~l~a~D-~v~~~~~~~~~~G~~~i~~~~ 64 (149)
T 2bng_A 15 TEAIRAVEAFLNALQN-EDFDTVDAALGDD-LVYENVGFSRIRGGRRTATLL 64 (149)
T ss_dssp HHHHHHHHHHHHHHHH-TCHHHHHHHEEEE-EEEEETTTEEEECHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-CCHHHHHHHcCCC-EEEEeCCCCCccCHHHHHHHH
Confidence 3456788999998874 4779999999998 7666555 5689999999888
No 62
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=83.07 E-value=1.1 Score=27.94 Aligned_cols=48 Identities=10% Similarity=0.219 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCc-----eeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGI-----QLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~-----~~~G~~~I~~kl 61 (99)
-.++-|+.||..+.. .+.+.|..+|.++ ..+...|. .+.|.++|.+.+
T Consensus 6 ~~~~~v~~~~~a~~~-~d~~~~~~l~a~D-~~~~~p~~~p~~g~~~G~~~i~~~~ 58 (135)
T 3fgy_A 6 ENVQIVKDFFAAMGR-GDKKGLLAVSAED-IEWIIPGEWPLAGTHRGHAALAALL 58 (135)
T ss_dssp HHHHHHHHHHHHHHH-TCHHHHHHTEEEE-EEEEECSSSTTCEEEEHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHc-CCHHHHHHhcCCC-eEEEEcCCCccceEEeCHHHHHHHH
Confidence 345678888888773 4789999999998 77776652 578999997766
No 63
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=82.30 E-value=2 Score=27.92 Aligned_cols=47 Identities=9% Similarity=0.121 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
-.++.|+.||..++. .+.+.+..+|.++ .....+| ...|.++|.+.+
T Consensus 5 ~~~~~v~~~~~a~~~-~D~~~~~~~~a~D-~v~~~p~-~~~G~~~~~~~~ 51 (158)
T 2gey_A 5 ERKALCLEMVAAWNR-WDLSGIIKHWSPD-IVHYSED-NEVSSADMVKLM 51 (158)
T ss_dssp HHHHHHHHHHHHHHT-TCTHHHHTTEEEE-EEEEETT-EEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CCHHHHHHHcCCC-eEEeCCC-CCCCHHHHHHHH
Confidence 356788899998884 4778999999998 7666654 679999998776
No 64
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=82.14 E-value=1.1 Score=27.68 Aligned_cols=46 Identities=13% Similarity=0.182 Sum_probs=35.5
Q ss_pred HHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC--------ceeccHHHHHhhh
Q psy4124 14 KGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG--------IQLQGAVKIMEKF 61 (99)
Q Consensus 14 ~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg--------~~~~G~~~I~~kl 61 (99)
.+-|+.||..++. .+.+.+..+|.++ ......+ ..+.|.++|.+.+
T Consensus 6 ~~~v~~~~~a~~~-~d~~~~~~l~a~D-~~~~~~~~~~p~~~~~~~~G~~~~~~~~ 59 (132)
T 3ebt_A 6 MQTVRESYEAFHR-RDLPGVLAALAPD-VRWTHPDGMSPYGLGGTKHGHDEVIAFI 59 (132)
T ss_dssp HHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEEECGGGGGGTCCEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-cCHHHHHHhcCCC-EEEEeCCCCCCcccCCcCcCHHHHHHHH
Confidence 4557778887774 4789999999998 7666652 4789999999877
No 65
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=81.93 E-value=1.4 Score=28.50 Aligned_cols=49 Identities=18% Similarity=0.327 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCc-----eeccHHHHHhhh
Q psy4124 11 AIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGI-----QLQGAVKIMEKF 61 (99)
Q Consensus 11 ~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~-----~~~G~~~I~~kl 61 (99)
+-..+.|+.||..++. .+.+.|..+|.++ ..+...|. .+.|.++|.+.+
T Consensus 29 ~~~~~~v~~~~~a~~~-gD~~~l~~l~a~D-~~~~~~~~~~~~g~~~G~~~i~~~~ 82 (156)
T 1tuh_A 29 EQNAETVRRGYAAFNS-GDMKTLTELFDEN-ASWHTPGRSRIAGDHKGREAIFAQF 82 (156)
T ss_dssp HHHHHHHHHHHHHHHH-TCHHHHHHHEEEE-EEEEECSSSTTCEEEESHHHHHHHH
T ss_pred chHHHHHHHHHHHHhC-CCHHHHHHhcCCC-EEEEccCCCCccceEcCHHHHHHHH
Confidence 3456788999998874 4789999999998 77766653 369999998776
No 66
>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}
Probab=81.60 E-value=1.3 Score=29.13 Aligned_cols=54 Identities=13% Similarity=0.043 Sum_probs=39.8
Q ss_pred CccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC-ceeccHHHHHhhh
Q psy4124 6 NPAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG-IQLQGAVKIMEKF 61 (99)
Q Consensus 6 ~p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg-~~~~G~~~I~~kl 61 (99)
.+.-.+--++.|+.||..++. .+.+.+..+|.++ ......+ ....|.+++.+.+
T Consensus 29 ~~~~~~~n~~~v~~~~~a~~~-~d~~~l~~~~a~D-~v~~~p~~g~~~G~e~~~~~~ 83 (159)
T 3k0z_A 29 SQKEATEMVHAAQRFYAFWDT-GKEELIPQTVTEN-FFDHTLPKGRPQGTEGLKFAA 83 (159)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-CCGGGHHHHEEEE-EEESSCCTTCCSSHHHHHHHH
T ss_pred ChhhhHHHHHHHHHHHHHHhc-CCHHHHHHHcCCC-eEEecCCCCCCCCHHHHHHHH
Confidence 333445567899999999984 4778999999987 5544432 3679999998877
No 67
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=81.21 E-value=2 Score=26.46 Aligned_cols=45 Identities=11% Similarity=0.124 Sum_probs=35.4
Q ss_pred HHHHHHHHhccCCCChhhhhhhccCCCceeeEcCc-eeccHHHHHhhh
Q psy4124 15 GFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGI-QLQGAVKIMEKF 61 (99)
Q Consensus 15 ~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~-~~~G~~~I~~kl 61 (99)
+-|+.||..+++ .+.+.+..+..++ -..+..|. ++.|++++.+.+
T Consensus 4 ~~v~~~~~a~~~-gD~~~~~~~ladD-v~w~~~g~~~~~G~~~~~~~~ 49 (112)
T 3f14_A 4 TTHYSIAQHFSS-GDFPAVYACFNDI-IEWNIIGNQVVKGKADVIDFC 49 (112)
T ss_dssp HHHHHHHHHHHT-TCGGGTGGGEEEE-EEEEETTTEEEESHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHhcCCc-eEEEEcCCccEecHHHHHHHH
Confidence 569999999984 4778899999987 55544454 689999998777
No 68
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=81.01 E-value=1.8 Score=27.79 Aligned_cols=48 Identities=6% Similarity=0.065 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
-.++.|+.||..++. .+.+.+..+|.++ ......+....|.++|.+.+
T Consensus 5 ~~~~~v~~~~~a~~~-~d~~~~~~~~a~D-~v~~~~~~~~~G~~~~~~~~ 52 (152)
T 2gex_A 5 ANKERCLEMVAAWNR-WDVSGVVAHWAPD-VVHYDDEDKPVSAEEVVRRM 52 (152)
T ss_dssp HHHHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEECTTSCEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCHHHHHHHcCCC-eEEeCCCCCCCCHHHHHHHH
Confidence 356778888888863 5778999999988 65554244789999998776
No 69
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=80.62 E-value=1.2 Score=28.90 Aligned_cols=47 Identities=9% Similarity=0.142 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCc-----eeccHHHHHhhh
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGI-----QLQGAVKIMEKF 61 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~-----~~~G~~~I~~kl 61 (99)
.++.|+.||..+.. .+.+.|..+|.++ ..+...|. .+.|.++|.+.+
T Consensus 22 n~~~v~~~~~a~~~-gD~~~l~~l~a~D-~v~~~p~~~~~~g~~~G~~~v~~~~ 73 (148)
T 3g8z_A 22 TIDIAKSYITAIQT-GDHATLGSIISPD-VIWHQPGNHQFSGTHRGMAVVGPML 73 (148)
T ss_dssp HHHHHHHHHHHHHH-TCHHHHHHHEEEE-EEEEECSSSTTCEEEESHHHHHHHH
T ss_pred hHHHHHHHHHHHhc-CCHHHHHHHcCCC-EEEEcCCCCCCCceEcCHHHHHHHH
Confidence 35677788887773 5789999999998 77777764 378999999877
No 70
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=80.15 E-value=1.4 Score=29.40 Aligned_cols=49 Identities=12% Similarity=0.117 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc--CceeccHHHHHhhh
Q psy4124 11 AIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE--GIQLQGAVKIMEKF 61 (99)
Q Consensus 11 ~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e--g~~~~G~~~I~~kl 61 (99)
+...++++.|+..+.+ .+.+.|..+|.++ ..++-. ..++.|.++|.+.+
T Consensus 20 ~~~~~~l~~f~~a~~~-gD~~aL~~LlA~D-vv~~~P~~~~~~~G~~av~~~~ 70 (148)
T 3f8x_A 20 AAVQSGLQEWHRIIAE-ADWERLPDLLAED-VVFSNPSTFDPYHGKGPLMVIL 70 (148)
T ss_dssp HHHHHHHHHHHHHHHH-TCGGGSGGGEEEE-EEEECSSCSSCEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCHHHHHHHhCCC-EEEECCCCCCCcCCHHHHHHHH
Confidence 6778899999998874 5789999999998 666543 34689999999888
No 71
>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP}
Probab=79.57 E-value=1.7 Score=27.73 Aligned_cols=48 Identities=8% Similarity=0.017 Sum_probs=37.4
Q ss_pred HHHHHHHHHHH-hccCCCC--hhhhhhhccCCCceeeEcC-ceeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYA-LFDDPAQ--RPNLINMYNTETSFMTFEG-IQLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~-~~d~~~~--r~~L~~~Y~~~~S~lt~eg-~~~~G~~~I~~kl 61 (99)
--++.|+.||. .++. .+ .+.+..+|.++ .....++ ....|.+++.+.+
T Consensus 10 ~n~~~v~~~~~~~~~~-~d~~~~~~~~~~a~d-~~~~~~~~~~~~G~~~~~~~~ 61 (146)
T 3kkg_A 10 QNVETVLRLFDEGWGA-QDGWRDVWRETMTPG-FRSIFHSNQAVEGIEQAIAFN 61 (146)
T ss_dssp CHHHHHHGGGTTTSTT-STTHHHHHHHHEEEE-EEEEETTSCCEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC-CCcHHHHHHHHcCCC-eEEecCCCCCCCCHHHHHHHH
Confidence 35788999999 7773 46 78999999988 6666554 3789999998766
No 72
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=79.22 E-value=3.8 Score=26.02 Aligned_cols=82 Identities=15% Similarity=0.217 Sum_probs=54.8
Q ss_pred cHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceee-E-cCceec-cHHHHHhhh------------------hc-CC
Q psy4124 8 AYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMT-F-EGIQLQ-GAVKIMEKF------------------NC-DD 65 (99)
Q Consensus 8 ~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt-~-eg~~~~-G~~~I~~kl------------------~~-d~ 65 (99)
+.++|-.. |+.|..-++. .+.+.|.+.|.|+ +.+. . +|.... ..++-.+ + .+ ++
T Consensus 7 d~~aI~~~-l~~Y~~g~~~-~D~~~l~~~Fhpd-A~~~~~~~g~~~~~~~~~~~~-v~~~p~~~~~~~~~~i~~I~i~gd 82 (120)
T 3fka_A 7 HIAALTAL-VETYVMAMTR-GDRPALERIFFGK-ASEVGHYEGELLWNSRDAFIA-MCEDAADAETDPFWAISSVSVQGD 82 (120)
T ss_dssp HHHHHHHH-HHHHHHHHHH-TCHHHHHHHEEEE-EEEEEEETTEEEEEEHHHHHH-HHHHHCCSSCCCCEEEEEEEEETT
T ss_pred HHHHHHHH-HHHHHHHHHh-cCHHHHHhhCCCC-eEEEEecCCcEEEcCHHHHHh-hcCCccCCCCCceEEEEEEEEECC
Confidence 34455444 8899999885 5789999999999 6663 3 343221 1222222 2 11 11
Q ss_pred ---------CCCeeEEEEEEEEeeCCEEEEEcceEee
Q psy4124 66 ---------DPPHAYSQIFVLKPLGASFYCQHDIFRL 93 (99)
Q Consensus 66 ---------~~~~~F~QtF~L~~~~~~y~v~NDifR~ 93 (99)
-++..|...|.|.+.+|+|-|.|=+|++
T Consensus 83 ~A~a~v~~~~~~~~f~D~~~L~k~dg~WkIv~K~~~~ 119 (120)
T 3fka_A 83 IAMLHVENDWAGMRFDDFLTVLLHEGSWRIVSKVYRI 119 (120)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEEEcCCCceEEEEEEEEeCCEEEEEEEEEEc
Confidence 2457899999999999999999988875
No 73
>3soy_A NTF2-like superfamily protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.00A {Salmonella enterica subsp}
Probab=78.89 E-value=11 Score=24.46 Aligned_cols=49 Identities=16% Similarity=0.209 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhccCCCChhhhhhhccCCC-ceeeEcCceeccHHHHHhh
Q psy4124 10 EAIGKGFVQQYYALFDDPAQRPNLINMYNTET-SFMTFEGIQLQGAVKIMEK 60 (99)
Q Consensus 10 ~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~-S~lt~eg~~~~G~~~I~~k 60 (99)
.+|...| +.|+..++. .+.+.|..+|.++. ......+-...|.++|.+.
T Consensus 10 ~ei~~~~-~~~~~Al~~-~D~~~l~~l~~~~~~~~~i~~~g~~~G~~~i~~~ 59 (145)
T 3soy_A 10 QEITEGI-NRYLYSIDK-ADPTLGKQLFYVSPETSFIHPRGHERGWSQIAEN 59 (145)
T ss_dssp HHHHHHH-HHHHHHHHT-TCHHHHTTTBCCSSSCEEEETTEEEESHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHc-CCHHHHHHHHhCCCCeEEEcCCCcccCHHHHHHH
Confidence 3555554 455555543 78999999997651 2223344467999999654
No 74
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=77.41 E-value=4.8 Score=27.68 Aligned_cols=47 Identities=17% Similarity=0.301 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCceeeE--cCceeccHHHHHhhh
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFMTF--EGIQLQGAVKIMEKF 61 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~--eg~~~~G~~~I~~kl 61 (99)
..++...|=+.+-+ .+...|.+||..+ |+++= -|.+.+|...|+++|
T Consensus 22 EqqlA~~Yi~AlT~-hDy~~L~~Fynrd-sVf~D~ta~~~YtG~r~Ii~Fl 70 (154)
T 3gzb_A 22 EQQLAVKYMDALTE-HDYKTLITFYNRD-SIFFDKTANRKYTGGRFIIDFL 70 (154)
T ss_dssp HHHHHHHHHHHHHT-TCHHHHHTTCCTT-CEEEETTTTEEEESHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-cCHHHHHHHhCcc-ceeeeeccCcceeCcHHHHHHH
Confidence 34555667777763 4899999999999 88864 367899999999998
No 75
>3ff0_A Phenazine biosynthesis protein PHZB 2; cystatin-like fold, antibiotic biosynthesis, virulence, STRU genomics; 1.90A {Pseudomonas aeruginosa}
Probab=76.03 E-value=1.6 Score=30.25 Aligned_cols=50 Identities=16% Similarity=0.196 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHhccCCCChhhhhhhccCCCce---eeE-cCc--eeccHHHHHhhh
Q psy4124 9 YEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSF---MTF-EGI--QLQGAVKIMEKF 61 (99)
Q Consensus 9 ~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~---lt~-eg~--~~~G~~~I~~kl 61 (99)
..+--++-|++|+.++. .+++.++.||.++ .. ++- .|. .+.|+++|.+.+
T Consensus 17 ~r~~Nr~vV~~~l~~~~--~D~~~~~~LfAeD-~v~~~~e~~~G~P~~~~Gre~l~~~~ 72 (163)
T 3ff0_A 17 LRRKNRETVVKYMNTKG--QDRLRRHELFVED-GCGGLWTTDTGSPIVIRGKDKLAEHA 72 (163)
T ss_dssp HHHHHHHHHHHHHTCCG--GGGGGGGGGEEEE-EEEEESSCSSSSCEEEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc--CCHHHHHHhcCCc-ccceeeEECCCCCcceecHHHHHHHH
Confidence 34555788999999998 8999999999998 55 432 243 488999999987
No 76
>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}
Probab=75.94 E-value=11 Score=24.51 Aligned_cols=47 Identities=6% Similarity=-0.026 Sum_probs=31.9
Q ss_pred HHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC----ceeccHHHHHhhh
Q psy4124 14 KGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG----IQLQGAVKIMEKF 61 (99)
Q Consensus 14 ~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg----~~~~G~~~I~~kl 61 (99)
++-|+.|+..+.+....+.|..||.++ ..+.-+. ....|.++|.+++
T Consensus 23 kevv~r~~e~~~~gd~~~~l~~lya~D-~v~~dp~~~~~~~~~G~eai~~~~ 73 (136)
T 3hk4_A 23 AEIAKDFTELLKQGDNAGAAEKYNADD-IASYEAMEGPMAVSHGKEALRQKS 73 (136)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHEEEE-EEEECSSCSTTSEEESHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHCCCC-EEEEcCCCCCccccCCHHHHHHHH
Confidence 345666667777221235689999998 6666541 2579999999877
No 77
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=75.49 E-value=2.8 Score=28.54 Aligned_cols=50 Identities=22% Similarity=0.440 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc----CceeccHHHHHhhh
Q psy4124 10 EAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE----GIQLQGAVKIMEKF 61 (99)
Q Consensus 10 ~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e----g~~~~G~~~I~~kl 61 (99)
.+.-++.|+.||..++. .+.+.|..++.++ .....+ |..+.|+++|.+.+
T Consensus 9 ~~~~~~~v~ry~~A~n~-gD~d~l~~l~aeD-~v~~~p~~~p~~~~~Greai~~~f 62 (156)
T 3g16_A 9 RAAMEKVIRTYYDGCNE-ADEAKMIACFVPE-AVHYFPAGMYGGAFRGAAQIAHRW 62 (156)
T ss_dssp HHHHHHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEECBTTSTTSCEESHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHc-CCHHHHHHhcCCC-EEEecCCCCCCCCccCHHHHHHHH
Confidence 45678899999999984 5789999999998 665543 44679999999888
No 78
>2imj_A Hypothetical protein DUF1348; alpha beta protein, structural genomics, PSI-2, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} SCOP: d.17.4.23
Probab=75.18 E-value=4.4 Score=28.30 Aligned_cols=55 Identities=5% Similarity=-0.057 Sum_probs=43.7
Q ss_pred CCccHHHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh
Q psy4124 5 LNPAYEAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 5 ~~p~~~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
+.|--.+.|.+=|+.=-...++ .+|+.++.-|+++ |...=-..-++|.++|.++|
T Consensus 11 lPPFt~EtA~~KVr~AEDaWNs-rdP~rValAYT~D-s~WRNR~eF~~GR~eI~~FL 65 (166)
T 2imj_A 11 LPPFTRESAIEKIRLAEDGWNS-RDPERVSLAYTLD-TQWRNRAEFAHNREEAKAFL 65 (166)
T ss_dssp CSSCCHHHHHHHHHHHHHHHTT-TCHHHHHTTEEEE-EEEEETTEEECSHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhhcc-cChHHHhhccCCC-CceeccccccCcHHHHHHHH
Confidence 3555667777777766666664 7899999999999 87766677899999999999
No 79
>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}
Probab=74.24 E-value=4.2 Score=25.68 Aligned_cols=47 Identities=9% Similarity=0.064 Sum_probs=34.6
Q ss_pred HHHHHHHHHH-hccCCCChhhhhhhccCCCce-eeEcC----ceeccHHHHHhhh
Q psy4124 13 GKGFVQQYYA-LFDDPAQRPNLINMYNTETSF-MTFEG----IQLQGAVKIMEKF 61 (99)
Q Consensus 13 g~~FV~~YY~-~~d~~~~r~~L~~~Y~~~~S~-lt~eg----~~~~G~~~I~~kl 61 (99)
.++.|+.||. .++. .+.+.+..+|.++ .. ....+ ....|.+++.+.+
T Consensus 8 ~~~~v~~~~~~~~~~-~d~~~~~~~~a~d-~~~~~~p~~~~~g~~~G~~~~~~~~ 60 (146)
T 3f9s_A 8 AKEILTQFTREVWSE-GNIEASDKYIAPK-YTVLHDPGDPWEGRELDVAGYKERV 60 (146)
T ss_dssp HHHHHHHHHHHHTTT-CCGGGHHHHEEEE-EEEEECTTCTTTTCEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CCHHHHHHHcCCC-eeeccCCCCCCCCCcCCHHHHHHHH
Confidence 4567888886 6663 5789999999988 66 33333 2578999998776
No 80
>3a76_A Gamma-hexachlorocyclohexane dehydrochlorinase; barrel fold, lyase, detoxification; HET: SPD; 2.25A {Sphingomonas paucimobilis}
Probab=74.12 E-value=2.1 Score=28.61 Aligned_cols=48 Identities=15% Similarity=0.152 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC-ceeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG-IQLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg-~~~~G~~~I~~kl 61 (99)
.-.+++..|...+|. .+.+.+..+|.++ ..+.+.+ ..+.|.++|.+.+
T Consensus 32 ~I~~ll~ry~~alD~-~d~d~~~~lfteD-a~~~~~~~g~~~G~~~i~~~~ 80 (176)
T 3a76_A 32 AIQDLYSDKLIAVDK-RQEGRLASIWWDD-AEWTIEGIGTYKGPEGALDLA 80 (176)
T ss_dssp HHHHHHHHHHHHHHH-TCHHHHHTTEEEE-EEEEETTTEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-CCHHHHHhhccCC-eEEEcCCCccccCHHHHHHHH
Confidence 345899999999994 4668999999999 8877665 3588999998766
No 81
>3f8h_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Silicibacter SP}
Probab=72.96 E-value=1.9 Score=28.14 Aligned_cols=45 Identities=13% Similarity=0.239 Sum_probs=35.2
Q ss_pred HHHHHHHHhccCCCChhhhhhhccCCCceeeE-cCceeccHHHHHhhh
Q psy4124 15 GFVQQYYALFDDPAQRPNLINMYNTETSFMTF-EGIQLQGAVKIMEKF 61 (99)
Q Consensus 15 ~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~-eg~~~~G~~~I~~kl 61 (99)
+-|+.||..++. .+.+.|..+|.++ ..... .|....|.++|.+.+
T Consensus 22 ~~v~~~~~a~n~-~D~~~l~~l~a~D-~v~~~~~~~~~~G~e~i~~~~ 67 (150)
T 3f8h_A 22 DTIARYFDAFNA-GDTDGMLACLSED-VAHHVNEGNIRVGKEKFAAFC 67 (150)
T ss_dssp CHHHHHHHHHHH-TCHHHHHTTEEEE-EEEEEETTEEEESHHHHHHHH
T ss_pred HHHHHHHHHHHc-cCHHHHHHHcCCC-eEEeCCCCcceeCHHHHHHHH
Confidence 468889998874 5789999999998 55322 456789999998876
No 82
>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*
Probab=72.09 E-value=1.2 Score=28.91 Aligned_cols=48 Identities=8% Similarity=0.027 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCce--eccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQ--LQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~--~~G~~~I~~kl 61 (99)
-.++.|+.||..++. .+.+.+..+|.++ ..+...+.. ..|.++|.+.+
T Consensus 12 ~~~~~v~~~~~a~~~-~d~~~~~~~~a~D-~v~~~p~~~~~~~G~~~~~~~~ 61 (153)
T 2f99_A 12 EQIAAVRRMVEAYNT-GKTDDVADYIHPE-YMNPGTLEFTSLRGPELFAINV 61 (153)
T ss_dssp HHHHHHHHHHHHHHH-CCCTTGGGTEEEE-EECGGGTTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCHHHHHHhcCCC-eEEecCCCCCCCCCHHHHHHHH
Confidence 456778899998874 4678999999987 555444433 58999998766
No 83
>2rgq_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.80A {Nostoc punctiforme} SCOP: d.17.4.25
Probab=71.38 E-value=4.9 Score=25.61 Aligned_cols=50 Identities=8% Similarity=0.068 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh
Q psy4124 10 EAIGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 10 ~~ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
.+--.+|+..|...+|. .+.+.+..+|.++ ..+........|.++|.+.+
T Consensus 9 ~~~I~~l~~rya~~lD~-~d~~~~~~lft~D-a~~~~~~g~~~g~~~i~~~~ 58 (144)
T 2rgq_A 9 KLEIMELAARFEMSLDK-EDVENYLATFASD-GALQGFWGIAKGKEELRQGF 58 (144)
T ss_dssp HHHHHHHHHHHHHHHHH-TCHHHHHTTEEEE-EEEEETTEEEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-CCHHHHHhhccCc-EEEEcCCCCCCCHHHHHHHH
Confidence 34456899999999994 4668999999998 77765522458999998777
No 84
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=70.98 E-value=6.7 Score=25.57 Aligned_cols=51 Identities=8% Similarity=-0.025 Sum_probs=37.4
Q ss_pred cHHHHHHHHHHHHHH-hccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh
Q psy4124 8 AYEAIGKGFVQQYYA-LFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 8 ~~~~ig~~FV~~YY~-~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
...+--++.|+.||. .++. .+.+.+.+++.++ -.....+. ..|.+++.+.+
T Consensus 24 ~~~~~nk~lV~~f~~~a~~~-~D~~~~~~~~a~D-~v~h~P~~-~~G~e~~~~~~ 75 (148)
T 3g0k_A 24 AEEQANHDLVIEMYNKVLIA-MDSSAVDRYIAPG-YVQHSSLA-EPSVEALKGFL 75 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTTT-TCGGGGGGTEEEE-EEECCSSS-CSSHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhc-CCHHHHHHhcCcC-eEEcCCCC-CCCHHHHHHHH
Confidence 345667789999999 7763 5778999999977 44443443 48999888766
No 85
>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=69.21 E-value=1.6 Score=27.48 Aligned_cols=47 Identities=6% Similarity=0.101 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCc-ee-ccHHHHHhhh
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGI-QL-QGAVKIMEKF 61 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~-~~-~G~~~I~~kl 61 (99)
.++.|+.||..++. .+.+.+..+|.++ ......+. .. .|.++|.+.+
T Consensus 4 ~~~~v~~~~~a~~~-~d~~~~~~~~a~d-~~~~~~~~~~~~~G~~~~~~~~ 52 (144)
T 1sjw_A 4 QTEIVRRMVSAFNT-GRTDDVDEYIHPD-YLNPATLEHGIHTGPKAFAQLV 52 (144)
T ss_dssp HHHHHHHHHHHHHH-CCCTTGGGTEEEE-EECGGGGGGTCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-CCHHHHHHHcCcC-eEEccCCCCCCCCCHHHHHHHH
Confidence 35678888888874 4678999999987 55443332 23 8999998766
No 86
>3ef8_A Putative scyalone dehydratase; YP_496742.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE PG4; 1.50A {Novosphingobium aromaticivorans DSM12444} SCOP: d.17.4.28
Probab=67.96 E-value=5.4 Score=25.70 Aligned_cols=46 Identities=9% Similarity=0.178 Sum_probs=37.6
Q ss_pred HHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC-ceeccHHHHHhhh
Q psy4124 14 KGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG-IQLQGAVKIMEKF 61 (99)
Q Consensus 14 ~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg-~~~~G~~~I~~kl 61 (99)
.+++..|-..+|. .+.+.+..+|.++ ..+.+.+ ..+.|.++|.+.+
T Consensus 14 ~~l~~ry~~~~D~-~d~~~~~~lFt~D-~~~~~~~~~~~~G~~~i~~~~ 60 (150)
T 3ef8_A 14 ERMMFDYSYHLDM-NHPEELAALFVED-CEVSYAPNFGATGRDAYKKTL 60 (150)
T ss_dssp HHHHHHHHHHHHT-TCHHHHHTTEEEE-EEEEEETTEEEESHHHHHHHT
T ss_pred HHHHHHHHHHhcC-CCHHHHHhhccCc-eEEEccCCCCCCCHHHHHHHH
Confidence 5788899999994 5779999999999 7777643 4689999998877
No 87
>3grd_A Uncharacterized NTF2-superfamily protein; NP_977240.1, NTF2-superfamily protein with unknown function, structural genomics; HET: MSE; 1.25A {Bacillus cereus atcc 10987} SCOP: d.17.4.0
Probab=64.42 E-value=1.4 Score=27.55 Aligned_cols=44 Identities=16% Similarity=0.084 Sum_probs=33.4
Q ss_pred HHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC-----ceeccHHHHHh
Q psy4124 14 KGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG-----IQLQGAVKIME 59 (99)
Q Consensus 14 ~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg-----~~~~G~~~I~~ 59 (99)
.+-|+.||..+++ .+.+.+..++.++ ......| ....|.++|.+
T Consensus 7 ~~~v~~~~~a~~~-~D~~~~~~l~a~D-~~~~~~~~~p~~g~~~G~~~~~~ 55 (134)
T 3grd_A 7 LEIIRSTYEGSAS-SNAKHLAEALSEK-VEWTEAEGFPYGGTYIGVEAIME 55 (134)
T ss_dssp HHHHHTTTSSCHH-HHHHHHHHHEEEE-EEEEECTTSTTCEEEESHHHHHH
T ss_pred HHHHHHHHHHHhc-CCHHHHHHhcCCC-eEEEecCCcccCcEEeCHHHHHH
Confidence 4678888888873 3678999999998 6665554 25789999985
No 88
>3ejv_A Uncharacterized protein with cystatin-like fold; structural genomics, joint center for ST genomics, JCSG; HET: MSE PGE; 1.40A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.28
Probab=57.75 E-value=6.6 Score=26.61 Aligned_cols=48 Identities=19% Similarity=0.254 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhccCCCChhhhhhhccCCCceeeEc---C------ceeccHHHHHhhh
Q psy4124 12 IGKGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE---G------IQLQGAVKIMEKF 61 (99)
Q Consensus 12 ig~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e---g------~~~~G~~~I~~kl 61 (99)
--.+++..|...+|. .+.+.+..+|.++ ..+.+. | ..+.|.++|.+.+
T Consensus 27 ~I~~l~~~y~~~~D~-~d~d~~~~lFt~D-~~~~~~~~~Gg~~g~~~~~~Gr~aI~~~~ 83 (179)
T 3ejv_A 27 IILNVLGQYTRAHDR-RDPDAMAALFAPE-ATIEIVDAVGGASRSISRLEGRDAIRVAV 83 (179)
T ss_dssp HHHHHHHHHHHHHHH-TCHHHHHTTEEEE-EEEEEEECGGGCCEEEEEEESHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCHHHHHhhcCCc-eEEEEeccCCCcCCCcceecCHHHHHHHH
Confidence 346778888888884 5679999999999 877663 3 2689999999987
No 89
>3ecf_A NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Anabaena variabilis atcc 29413} SCOP: d.17.4.21
Probab=57.25 E-value=27 Score=23.26 Aligned_cols=75 Identities=17% Similarity=0.407 Sum_probs=51.9
Q ss_pred HHHHHHHHHhccCCCChhhhhhhccCCCceeeEcC----ceeccHHHHHhhh----------hcCC---CCCeeEEEEEE
Q psy4124 14 KGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEG----IQLQGAVKIMEKF----------NCDD---DPPHAYSQIFV 76 (99)
Q Consensus 14 ~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg----~~~~G~~~I~~kl----------~~d~---~~~~~F~QtF~ 76 (99)
.+-+++|...|- +.-=...+| ++.+.|.| .++.|.++|..+| ++.+ +-|+ =+=+|.
T Consensus 8 v~iieqYl~aF~--TgdfS~VqF----s~~~~F~sPir~~~l~G~~tV~gFlt~V~trVa~V~i~~hiVeyp~-as~vf~ 80 (130)
T 3ecf_A 8 HEILKKYFLSFE--TGDFSQVQF----SCNLEFLSPISGNTLKGTEEVIPFLKGVTTRVAEVNIMSTTVEYPR-ASGVWQ 80 (130)
T ss_dssp HHHHHHHHHHHH--HCCCTTSCE----EEEEEECCTTCSSCEESHHHHHHHHHHHHTTEEEEEEEEEEEETTE-EEEEEE
T ss_pred HHHHHHHHHHHh--cCCeeeccc----ccCcEEecCccCCCccCchhHHHHHhhhhhhhheeeeeEEEeccCc-cceeEE
Confidence 456889999988 444334443 36677765 5899999999998 1110 1222 356788
Q ss_pred EEeeCCEEEEEcceEeeec
Q psy4124 77 LKPLGASFYCQHDIFRLGI 95 (99)
Q Consensus 77 L~~~~~~y~v~NDifR~~~ 95 (99)
.+..+|--|++.|.|||-.
T Consensus 81 m~TtkG~~~~~~~~f~~de 99 (130)
T 3ecf_A 81 MRTTKGTLYTLHNFFRLDE 99 (130)
T ss_dssp EEETTSCEEEEEEEEEEET
T ss_pred EEeccceEEEEeehheecc
Confidence 8888888999999999853
No 90
>3lyg_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE GOL; 1.61A {Colwellia psychrerythraea}
Probab=56.20 E-value=2.5 Score=28.23 Aligned_cols=43 Identities=16% Similarity=0.244 Sum_probs=33.0
Q ss_pred HHHHHHhccCCCChhhhhhhccCCCceeeEcC--ceeccHHHHHhhh
Q psy4124 17 VQQYYALFDDPAQRPNLINMYNTETSFMTFEG--IQLQGAVKIMEKF 61 (99)
Q Consensus 17 V~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg--~~~~G~~~I~~kl 61 (99)
||.=.+.+.. .+-+.|...|.++ +.+.|+| ..+.|++++..-|
T Consensus 8 VqrlW~al~A-gD~D~l~adyaeD-aV~i~P~sa~vl~GR~~~r~a~ 52 (120)
T 3lyg_A 8 VQRGWEALGA-GDFDTLVTDYVEK-MIFIMPGQADVLKGRQAFRSAL 52 (120)
T ss_dssp HHHHHHHHHH-TCHHHHGGGEEEE-EEEECSSTTCEEESHHHHHHHH
T ss_pred HHHHHHHHhc-CCHHHHHHhcccC-eEEEccCccceeecHHHHHHHH
Confidence 4444445542 4668999999999 9999994 5799999998855
No 91
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=53.25 E-value=33 Score=20.28 Aligned_cols=45 Identities=2% Similarity=0.039 Sum_probs=29.6
Q ss_pred HHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh
Q psy4124 15 GFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 15 ~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
+-.+.|+..+.. .+.+.|..++.|+ -.....+-.+.|++++++.+
T Consensus 10 ~l~~~~~~A~~~-~D~~~l~~l~~~d-~~~~~~~G~~~~~~~~i~~~ 54 (123)
T 2r4i_A 10 DCEKKLLTAIQN-NDVESLEVLLHDD-LLFIIPSGETVTKETDIAAY 54 (123)
T ss_dssp HHHHHHHHHHHH-TCHHHHHHHEEEE-EEEECTTSCEECHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCHHHHHhhhCcC-eEEECCCCCCccHHHHHHHH
Confidence 344555555432 7899999999987 44444444566888877666
No 92
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=50.16 E-value=16 Score=24.67 Aligned_cols=46 Identities=2% Similarity=-0.020 Sum_probs=36.6
Q ss_pred HHHHHHHHHhccCCCChhhhhhhccCCCceeeEc--CceeccHHHHHhhh
Q psy4124 14 KGFVQQYYALFDDPAQRPNLINMYNTETSFMTFE--GIQLQGAVKIMEKF 61 (99)
Q Consensus 14 ~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~e--g~~~~G~~~I~~kl 61 (99)
...++.|+..+.+ .+.+.|..+|.++ ..++=. ..++.|+++|.+.|
T Consensus 21 ~~~v~~f~~A~~~-gD~~aL~~LlA~D-vv~~sP~~~~p~~Gr~av~~~l 68 (155)
T 3flj_A 21 HPTIARMQEVVAK-GDESLIHALLAED-VRFMPPTYYKTWTGRDPVAAVL 68 (155)
T ss_dssp CHHHHHHHHHHTT-TCHHHHHTTEEEE-EEEECSSSSCCEESHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCHHHHHHhcCCC-EEEECCCCCCCcCCHHHHHHHH
Confidence 3578889998875 5789999999998 655533 45789999999887
No 93
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=44.83 E-value=45 Score=20.57 Aligned_cols=79 Identities=6% Similarity=0.063 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhccCCCChhhhhhhccCCCceeeE-c--Cc-eeccHHHHHhhh-----------------hc-CC-----
Q psy4124 13 GKGFVQQYYALFDDPAQRPNLINMYNTETSFMTF-E--GI-QLQGAVKIMEKF-----------------NC-DD----- 65 (99)
Q Consensus 13 g~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~-e--g~-~~~G~~~I~~kl-----------------~~-d~----- 65 (99)
-.+-++.|..-++. .+.+.|.+.|.|+ +.+.. . |. .....++.++.+ .+ ++
T Consensus 14 I~~~~~~y~~a~~~-~D~~~l~~~f~~d-a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~i~gd~A~a~ 91 (128)
T 3blz_A 14 IVEVLSKYNEGGKK-ADSTIMRPAFSSQ-ATIFGVDVDNKLTGGPIQGLFDVIDNVFHPSPEAKAAIARIDIVGTAASAR 91 (128)
T ss_dssp HHHHHHHHHHHHHH-TCHHHHGGGEEEE-EEEEEECTTSCEEEEETHHHHHHHHHTCCCCTTCEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHh-CCHHHHHHhhCCC-cEEEEEeCCCcEEecCHHHHHHHHHhcCCCCccccCeEEEEEEECCEEEEE
Confidence 34668889888884 5778899999998 66632 2 32 112222222211 11 11
Q ss_pred -----CCCeeEEEEEEEEeeCCEEEEEcceEee
Q psy4124 66 -----DPPHAYSQIFVLKPLGASFYCQHDIFRL 93 (99)
Q Consensus 66 -----~~~~~F~QtF~L~~~~~~y~v~NDifR~ 93 (99)
-+...|.-.|.|.+.+|+|-|.+-++..
T Consensus 92 ~~~~~~~~~~~~d~~~l~k~dg~WkI~~~~~~~ 124 (128)
T 3blz_A 92 IDTDDISGFRFTDFFNLLKVEGKWTVVSKIYHT 124 (128)
T ss_dssp EEEEEETTEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEcCCCceEEeEEEEEECCEEEEEEEEEEe
Confidence 1134577788899999999999887764
No 94
>1tp6_A Hypothetical protein PA1314; structural genomics, alpha-beta sandwich, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.12
Probab=40.20 E-value=67 Score=20.11 Aligned_cols=55 Identities=11% Similarity=0.004 Sum_probs=38.9
Q ss_pred CccHHHHHH--HHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh
Q psy4124 6 NPAYEAIGK--GFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 6 ~p~~~~ig~--~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
+|-..+|.. .+++.+.+-.....+-+.|-..|.|+ ..|.-.+-.+.|.+++.+.+
T Consensus 3 ~~~~~ev~~~~~~ie~W~~~~~~~~dl~~l~a~~a~d-~~mv~p~G~~~g~~~~~~~~ 59 (128)
T 1tp6_A 3 CAYRREIHHAHVAIRDWLAGDSRADALDALMARFAED-FSMVTPHGVVLDKTALGELF 59 (128)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCTTHHHHHHTTEEEE-EEEECTTSCEEEHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCcHhHHHHHHHhcCCC-EEEECCCCeECCHHHHHHHH
Confidence 455555543 66777777655222577889999999 66655666789999999887
No 95
>3ke7_A Putative ketosteroid isomerase; structural genomics, joint C structural genomics, JCSG, protein structure initiative; HET: MSE BCN; 1.45A {Parabacteroides distasonis atcc 8503}
Probab=37.95 E-value=43 Score=21.70 Aligned_cols=32 Identities=9% Similarity=0.369 Sum_probs=24.1
Q ss_pred CChhhhhhhccCCCceeeEc---CceeccHHHHHhhh
Q psy4124 28 AQRPNLINMYNTETSFMTFE---GIQLQGAVKIMEKF 61 (99)
Q Consensus 28 ~~r~~L~~~Y~~~~S~lt~e---g~~~~G~~~I~~kl 61 (99)
.+.+.+.++|.|+ ..+ |+ +..+.|.++|.+.+
T Consensus 30 gD~~~~~~lyapD-vt~-fDp~~~~~~~G~~a~r~yf 64 (134)
T 3ke7_A 30 TDPMAFVELSDTD-VIY-FDPSLETKIEGLEQLRTYY 64 (134)
T ss_dssp SCTTHHHHHEEEE-EEE-ECTTCSSCEESHHHHHHHH
T ss_pred CCHHHHHHhcCCC-EEE-EcCCCccccCCHHHHHHHH
Confidence 7899999999987 333 33 35688999988766
No 96
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=37.51 E-value=59 Score=20.08 Aligned_cols=46 Identities=7% Similarity=-0.012 Sum_probs=27.7
Q ss_pred HHHHHHHHHhccCCCChhhhhhhccCCCceeeEcCceeccHHHHHhhh
Q psy4124 14 KGFVQQYYALFDDPAQRPNLINMYNTETSFMTFEGIQLQGAVKIMEKF 61 (99)
Q Consensus 14 ~~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~eg~~~~G~~~I~~kl 61 (99)
.+-.+.|+..+.. .+.+.|.+++.|+ -.....+-...+.++.++.+
T Consensus 17 ~~l~~~~~~A~~~-~D~~~l~~L~~~d-~~~v~~~G~~~~~~~~l~~~ 62 (134)
T 3fsd_A 17 AFYEERLRAAMLT-GDLKGLETLLADD-LAFVDHTGCVKTKQTHLEPY 62 (134)
T ss_dssp HHHHHHHHHHHHH-TCHHHHHHHEEEE-EEEECTTSCEECHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCHHHHHhhcCCC-EEEECCCCcCccHHHHHHHH
Confidence 3455566665543 7999999999987 44443322334455544444
No 97
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=37.40 E-value=73 Score=20.55 Aligned_cols=74 Identities=14% Similarity=0.110 Sum_probs=48.5
Q ss_pred HHHHHHHHhccCCCChhhhhhhccCCCceeeE--cCceeccHHHHHhhh-------------------------------
Q psy4124 15 GFVQQYYALFDDPAQRPNLINMYNTETSFMTF--EGIQLQGAVKIMEKF------------------------------- 61 (99)
Q Consensus 15 ~FV~~YY~~~d~~~~r~~L~~~Y~~~~S~lt~--eg~~~~G~~~I~~kl------------------------------- 61 (99)
+.++++...+.+ .+.+.+.++|.|+-....+ .|+.+.|.+.+...+
T Consensus 16 ~~~~~~~~Ai~~-gD~~~~~~l~~~dv~~Fd~~~~g~~~~g~~~~r~~f~~~~~~~~~~~~~~~~V~~~g~d~Av~~y~~ 94 (143)
T 2f86_B 16 RVTQTLLDAISC-KDFETYTRLCDTSMTCFEPEALGNLIEGIEFHRFYFDGNRKNQVHTTMLNPNVHIIGEDAACVAYVK 94 (143)
T ss_dssp HHHHHHHHHHHH-TCHHHHHHHEEEEEEEECGGGTTCCEETTHHHHTTSSSCSCCSCEEEEEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHHHc-cCHHHHHHhcCCCEEEEccCcCCccccCHHHHHHHHhcccCCcceeEEEcceEEEeCCCEEEEEEEe
Confidence 567777777664 6889999999987222233 366788988866211
Q ss_pred --h-cC-CCCCe--eEEEEEEEEeeCCEEEEEcc
Q psy4124 62 --N-CD-DDPPH--AYSQIFVLKPLGASFYCQHD 89 (99)
Q Consensus 62 --~-~d-~~~~~--~F~QtF~L~~~~~~y~v~ND 89 (99)
+ .+ ++.+. ...-|.+++..+|+|.|...
T Consensus 95 ~~~~~~~~G~~~~~~~r~T~V~~k~~g~WkivH~ 128 (143)
T 2f86_B 95 LTQFLDRNGEAHTRQSQESRVWSKKQGRWVCVHV 128 (143)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred eeeeccCCCCeeeEEEEEEEEEEEeCCcEEEEEE
Confidence 1 11 23333 47778888888888887653
No 98
>2xyk_A 2-ON-2 hemoglobin; oxygen storage-transport complex; HET: HEM; 2.10A {Agrobacterium tumefaciens}
Probab=31.25 E-value=30 Score=22.28 Aligned_cols=37 Identities=30% Similarity=0.479 Sum_probs=28.5
Q ss_pred CCCCCCccHHHHH-H----HHHHHHHHhccCCCChh--hhhhhccC
Q psy4124 1 MSSQLNPAYEAIG-K----GFVQQYYALFDDPAQRP--NLINMYNT 39 (99)
Q Consensus 1 ~~~~~~p~~~~ig-~----~FV~~YY~~~d~~~~r~--~L~~~Y~~ 39 (99)
|++++..-++.|| . ..|..+|.... ++++ .|..++..
T Consensus 1 ~~~~~~tlye~iGG~~~i~~lV~~FY~~v~--~Dp~~~~l~~~F~~ 44 (133)
T 2xyk_A 1 MSSETVTLYEAIGGDATVRALTRRFYELMD--TLPEAARCRAIHPA 44 (133)
T ss_dssp CBSSSBCHHHHHTHHHHHHHHHHHHHHHHH--HCGGGHHHHHHSCS
T ss_pred CCCCCCCHHHHhcCHHHHHHHHHHHHHHHH--hCccccHHHHhccC
Confidence 6677777788887 2 68999999999 7762 68888863
No 99
>1s2x_A CAG-Z; CAG pathogenicity island, type IV secretion system, unknown function; 1.90A {Helicobacter pylori} SCOP: a.47.3.1
Probab=30.88 E-value=49 Score=22.83 Aligned_cols=31 Identities=19% Similarity=0.347 Sum_probs=25.6
Q ss_pred CCCCccHHHHHHHHHHHHHHhccCCCChhhh
Q psy4124 3 SQLNPAYEAIGKGFVQQYYALFDDPAQRPNL 33 (99)
Q Consensus 3 ~~~~p~~~~ig~~FV~~YY~~~d~~~~r~~L 33 (99)
|++...+.+|-..|+|.|=+-+.+.++|...
T Consensus 25 sslm~nanevrdkfiqnyatslkdsndpqdf 55 (206)
T 1s2x_A 25 SSLMRNANEVRDKFIQNYATSLKDSNDPQDF 55 (206)
T ss_dssp TTTTTTHHHHHHHHHHHHTGGGGGCCSHHHH
T ss_pred hHhhcchHHHHHHHHHHHHhhcccCCCHHHH
Confidence 5667789999999999999999876776543
No 100
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=28.82 E-value=2.8 Score=25.02 Aligned_cols=15 Identities=33% Similarity=0.786 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHhcc
Q psy4124 11 AIGKGFVQQYYALFD 25 (99)
Q Consensus 11 ~ig~~FV~~YY~~~d 25 (99)
-+|..|.+.||..||
T Consensus 61 ILGd~Fl~~~y~vfD 75 (87)
T 1b5f_B 61 ILGDVFMRPYHTVFD 75 (87)
T ss_dssp EECHHHHTTEEEEEE
T ss_pred EechHHhccEEEEEE
Confidence 378899999999999
No 101
>3j20_S 30S ribosomal protein S17E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.39 E-value=66 Score=19.03 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=17.6
Q ss_pred ccHHHHHHHHHHHHHHhccCCCC
Q psy4124 7 PAYEAIGKGFVQQYYALFDDPAQ 29 (99)
Q Consensus 7 p~~~~ig~~FV~~YY~~~d~~~~ 29 (99)
-....+|+.-++.||..|. .|
T Consensus 7 k~VKr~a~~liekY~~~~t--~D 27 (67)
T 3j20_S 7 GFIKRVARELVNKYPNEFT--TD 27 (67)
T ss_dssp HHHHHHHHHHHHHSGGGCC--SC
T ss_pred HHHHHHHHHHHHHhhhhhc--cc
Confidence 3456899999999999998 55
Done!