RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4130
(314 letters)
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT
{Human (Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 84.3 bits (207), Expect = 6e-19
Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 6/174 (3%)
Query: 34 EVAVECLCKAYDIPDNIDPASNVDIESLFQLYYKDEVLQWYSN-INFSPTEEVKIEAEKY 92
+ AV +A + N ++ D + Y I P + Y
Sbjct: 220 DRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHF-----PDAY 274
Query: 93 KNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIAIKI 152
NL N ++ +A Y+ A+ ++ N A + N + A+R + A+++
Sbjct: 275 CNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEV 334
Query: 153 DPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLNN 206
P +A A+ + Q + AL Y +A + P +NM + + +
Sbjct: 335 FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD 388
Score = 78.6 bits (192), Expect = 5e-17
Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 4/177 (2%)
Query: 34 EVAVECLCKAYDIPDNIDPASNVDIESLFQLYYKDEVLQWYSNINFSPTEEVKIEAEKYK 93
+A+ KA + N A L + D + Y A +
Sbjct: 186 WLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRAL----SLSPNHAVVHG 241
Query: 94 NLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIAIKID 153
NL +Q + A+ Y +AI+ P YCN A + + + A A+++
Sbjct: 242 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 301
Query: 154 PHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLNNSSSA 210
P +A + + + + + A+ Y KA E+ P +N+ + + A
Sbjct: 302 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEA 358
Score = 73.2 bits (178), Expect = 3e-15
Identities = 27/122 (22%), Positives = 52/122 (42%)
Query: 89 AEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQI 148
A + NLG Q + A+ + KA+ D + Y N + + + A+
Sbjct: 169 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 228
Query: 149 AIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLNNSS 208
A+ + P++A +G + Y + A++ Y +A EL P+ P N+ A+ + +
Sbjct: 229 ALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVA 288
Query: 209 SA 210
A
Sbjct: 289 EA 290
Score = 60.8 bits (146), Expect = 4e-11
Identities = 14/80 (17%), Positives = 28/80 (35%)
Query: 94 NLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIAIKID 153
L + Q E A + + N ++ + + + + +AIK +
Sbjct: 4 ELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQN 63
Query: 154 PHYAKAYGRMGLAYTQMNDY 173
P A+AY +G Y +
Sbjct: 64 PLLAEAYSNLGNVYKERGQL 83
Score = 58.9 bits (141), Expect = 2e-10
Identities = 9/63 (14%), Positives = 22/63 (34%)
Query: 135 KLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYA 194
+ +++ A R C + +P + + Q + T A + +P
Sbjct: 11 QAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAY 70
Query: 195 NNM 197
+N+
Sbjct: 71 SNL 73
Score = 36.6 bits (83), Expect = 0.003
Identities = 5/48 (10%), Positives = 15/48 (31%)
Query: 163 MGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLNNSSSA 210
+ Q D++AA + +P++ + + +
Sbjct: 5 LAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 52
Score = 33.1 bits (74), Expect = 0.034
Identities = 6/42 (14%), Positives = 13/42 (30%)
Query: 89 AEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRA 130
L + Q + +++ + AI + Y N
Sbjct: 33 TGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLG 74
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 201
Score = 76.5 bits (187), Expect = 3e-17
Identities = 31/110 (28%), Positives = 49/110 (44%)
Query: 88 EAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQ 147
A++ K GN K +A Y +AI + VYY NRA K++ + AL DC+
Sbjct: 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCR 62
Query: 148 IAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNM 197
A+++D KA+ +G +M Y A+ +A L L +
Sbjct: 63 RALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 112
Score = 46.1 bits (108), Expect = 1e-06
Identities = 18/192 (9%), Positives = 57/192 (29%), Gaps = 9/192 (4%)
Query: 19 ELLRDTLNAESKEG-IEVAVECLCKAYDI-PDNIDPASNVDIESLFQLYYKDEVLQWYSN 76
+ L++ N A C +A P +N + L + +
Sbjct: 5 QELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRA 64
Query: 77 INFSPTEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKL 136
+ + + LG ++ + ++A+ +A + + + S ++
Sbjct: 65 LELDGQSV-----KAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRI 119
Query: 137 --KNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYA 194
K ++ + +I + + H ++ + + E + +
Sbjct: 120 AKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIE 179
Query: 195 NNMQAAMSNLNN 206
M++++
Sbjct: 180 AKHDKYMADMDE 191
Score = 37.6 bits (86), Expect = 0.001
Identities = 17/76 (22%), Positives = 25/76 (32%)
Query: 135 KLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYA 194
+ Y A AI +P A Y L Y +M + AL +A ELD
Sbjct: 16 VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 75
Query: 195 NNMQAAMSNLNNSSSA 210
+ + + A
Sbjct: 76 FFLGQCQLEMESYDEA 91
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 71.4 bits (174), Expect = 4e-16
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 88 EAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQ 147
+A K K LGN A ++ + A+ Y KA + D +N Y N+AA + +Y C+
Sbjct: 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCE 62
Query: 148 IAIKIDP-------HYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQA 199
AI++ AKAY R+G +Y + YK A+ Y K+ + QA
Sbjct: 63 KAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQA 121
Score = 37.5 bits (86), Expect = 4e-04
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 157 AKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLNN 206
A +G + D+ AL+ Y KA ELDP + Y N A +
Sbjct: 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGD 53
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 159
Score = 67.8 bits (164), Expect = 2e-14
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 81 PTEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYK 140
P + AE+ K N + E A+ YS+AI+ + SN +YY NR+ + + + Y
Sbjct: 2 PADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYG 61
Query: 141 LALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAA 200
AL D AI++D Y K Y R + + ++AAL Y ++ P+D Q
Sbjct: 62 YALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 121
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase
alpha-subunit, N-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 334
Score = 67.3 bits (163), Expect = 2e-13
Identities = 17/168 (10%), Positives = 48/168 (28%), Gaps = 8/168 (4%)
Query: 34 EVAVECLCKAYDIPDNIDPASNVDIESLFQLYYKDEVLQWYSNINFSPTEEVKIEAEKYK 93
+ + + + L QL+ + + +E+
Sbjct: 161 AEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKEL-------- 212
Query: 94 NLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIAIKID 153
L A D +Q+ Y + + + L++ + ++ Q +
Sbjct: 213 ELVQNAFFTDPNDQSAWFYHRWLLGRAEPLFRCELSVEKSTVLQSELESCKELQELEPEN 272
Query: 154 PHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAM 201
+ A + K L+ ++ +DP Y +++++
Sbjct: 273 KWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKF 320
Score = 30.4 bits (67), Expect = 0.27
Identities = 12/95 (12%), Positives = 27/95 (28%), Gaps = 1/95 (1%)
Query: 134 NKLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLY 193
K + + + K+ Y A + ++ LE ++ +P+
Sbjct: 7 VKTSEEQAEAKRLEREQKLKL-YQSATQAVFQKRQAGELDESVLELTSQILGANPDFATL 65
Query: 194 ANNMQAAMSNLNNSSSASGSGGVFPGLSEMSTKVL 228
N + + +L S S + L
Sbjct: 66 WNCRREVLQHLETEKSPEESAALVKAELGFLESCL 100
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 63.5 bits (153), Expect = 2e-13
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 88 EAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQ 147
+ + K GN A+ + A+ YS+AI D N V Y NR+A+ K +Y+ A D
Sbjct: 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGC 61
Query: 148 IAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAA 200
+ + P + K Y R A +N ++ A Y + + + N+P +Q
Sbjct: 62 KTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNM 114
Score = 26.5 bits (57), Expect = 2.3
Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 5/113 (4%)
Query: 19 ELLRDTLNAESKEG-IEVAVECLCKAYDIPDNIDPASNVDIESLFQLYYKDEVLQWYSNI 77
L++ N G I+ A++C +A +DP ++V + Y K Q
Sbjct: 4 NELKEKGNKALSVGNIDDALQCYSEAI----KLDPHNHVLYSNRSAAYAKKGDYQKAYED 59
Query: 78 NFSPTEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRA 130
+ + Y ++ E+A Y + + + +NP
Sbjct: 60 GCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQ 112
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 66.7 bits (162), Expect = 6e-13
Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 2/124 (1%)
Query: 88 EAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQ 147
K LG + +Q V S + + + A +
Sbjct: 119 CRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHC--LVHLGDIARYRNQTSQAESYYR 176
Query: 148 IAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLNNS 207
A ++ P + Y ++ + + D+ + Y ++ + P + N+Q A+S S
Sbjct: 177 HAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALES 236
Query: 208 SSAS 211
Sbjct: 237 RDEV 240
Score = 54.8 bits (131), Expect = 5e-09
Identities = 22/146 (15%), Positives = 52/146 (35%), Gaps = 8/146 (5%)
Query: 34 EVAVECLCKAYDI-PDNIDPASNVDIESLFQLYYKDEVLQWYSNINFSPTEEVKIEAEKY 92
++ LC +++ +S + I S Q + V S+ ++
Sbjct: 103 TQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC-------QHCL 155
Query: 93 KNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIAIKI 152
+LG+ A +++ QA Y A SN Y A + ++ + +I +
Sbjct: 156 VHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAV 215
Query: 153 DPHYAKAYGRMGLAYTQMNDYKAALE 178
+ A + A ++ + + ++
Sbjct: 216 KFPFPAASTNLQKALSKALESRDEVK 241
Score = 54.0 bits (129), Expect = 7e-09
Identities = 10/140 (7%), Positives = 26/140 (18%), Gaps = 38/140 (27%)
Query: 89 AEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNK------------- 135
+ + + Y K + D + N
Sbjct: 20 TDSKLGPAEVWTSRQALQDL---YQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQA 76
Query: 136 ----------------------LKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDY 173
Y L++ +D ++G+ +
Sbjct: 77 KNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHT 136
Query: 174 KAALEAYTKAAELDPNDPLY 193
A ++ + + L
Sbjct: 137 SAIVKPQSSSCSYICQHCLV 156
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus)
[TaxId: 9913]}
Length = 169
Score = 60.9 bits (146), Expect = 6e-12
Identities = 30/148 (20%), Positives = 58/148 (39%), Gaps = 16/148 (10%)
Query: 75 SNINFSPTEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDC---------------- 118
++++ +++ + +E KN+GNT + E A+ +Y+K +
Sbjct: 13 ADVDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKL 72
Query: 119 DNSNPVYYCNRAASNNKLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYKAALE 178
N A K+ +++ A+ C A++IDP KA R + + +Y AL
Sbjct: 73 QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALA 132
Query: 179 AYTKAAELDPNDPLYANNMQAAMSNLNN 206
KA E+ P D + +
Sbjct: 133 DLKKAQEIAPEDKAIQAELLKVKQKIKA 160
Score = 43.9 bits (102), Expect = 5e-06
Identities = 21/92 (22%), Positives = 34/92 (36%)
Query: 89 AEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQI 148
N+G ++ + AV +A++ D SN RA LK Y AL D +
Sbjct: 77 LSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKK 136
Query: 149 AIKIDPHYAKAYGRMGLAYTQMNDYKAALEAY 180
A +I P + ++ K +A
Sbjct: 137 AQEIAPEDKAIQAELLKVKQKIKAQKDKEKAA 168
Score = 33.5 bits (75), Expect = 0.017
Identities = 11/95 (11%), Positives = 26/95 (27%)
Query: 50 IDPASNVDIESLFQLYYKDEVLQWYSNINFSPTEEVKIEAEKYKNLGNTAMQQDKPEQAV 109
+ P + + ++ K Q + E + + +QA+
Sbjct: 72 LQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQAL 131
Query: 110 IEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALR 144
+ KA + + K+K K +
Sbjct: 132 ADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEK 166
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 168
Score = 60.7 bits (146), Expect = 7e-12
Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Query: 82 TEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDC---------------DNSNPVYY 126
T+E +A K G + K QAVI+Y K + ++ +
Sbjct: 8 TKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAF 67
Query: 127 CNRAASNNKLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAEL 186
N A KL+ Y A+ C A+ +D K R G A MN++++A + K E+
Sbjct: 68 LNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV 127
Query: 187 DPNDPLYANNMQAAMSNLNN 206
+P + +
Sbjct: 128 NPQNKAARLQIFMCQKKAKE 147
Score = 49.2 bits (116), Expect = 7e-08
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 3/115 (2%)
Query: 65 YYKDEVLQWYSNINFSPTEEVKIEAEK---YKNLGNTAMQQDKPEQAVIEYSKAIDCDNS 121
Y V S E E+ + NL ++ + +AV KA+ D++
Sbjct: 37 QYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSA 96
Query: 122 NPVYYCNRAASNNKLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYKAA 176
N R + + ++ A D + ++++P A ++ + + ++
Sbjct: 97 NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKAKEHNER 151
Score = 36.9 bits (84), Expect = 0.001
Identities = 16/122 (13%), Positives = 32/122 (26%), Gaps = 4/122 (3%)
Query: 27 AESKEGIEVAVECLCKAYDIPDNIDPASNVDIESLF----QLYYKDEVLQWYSNINFSPT 82
++ V L Y + + AS + + F Y K
Sbjct: 32 VQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKAL 91
Query: 83 EEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLA 142
+ G + ++ E A ++ K ++ + N K K +
Sbjct: 92 GLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKAKEHNER 151
Query: 143 LR 144
R
Sbjct: 152 DR 153
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 264
Score = 61.6 bits (149), Expect = 1e-11
Identities = 15/106 (14%), Positives = 35/106 (33%)
Query: 96 GNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIAIKIDPH 155
A+ + + +QA+ +AI + + +++ A +IK+ P
Sbjct: 3 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPE 62
Query: 156 YAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAM 201
Y ++ K + A L N+ L + + +
Sbjct: 63 YLPGASQLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNL 108
Score = 48.9 bits (116), Expect = 2e-07
Identities = 12/113 (10%), Positives = 25/113 (22%), Gaps = 1/113 (0%)
Query: 89 AEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRD-CQ 147
A + E+A + ++I + K +
Sbjct: 30 ASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARKDFAQGAAT 89
Query: 148 IAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAA 200
+ + DY+ E + EL AN+ +
Sbjct: 90 AKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFLANDTSFS 142
Score = 32.7 bits (74), Expect = 0.037
Identities = 7/42 (16%), Positives = 14/42 (33%)
Query: 169 QMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLNNSSSA 210
+ ALE +A + P D ++ + + A
Sbjct: 8 SEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERA 49
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl
isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Length = 153
Score = 58.5 bits (140), Expect = 3e-11
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 16/142 (11%)
Query: 82 TEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVY---------------- 125
EE A K GN ++++ +A+++Y +A+D +
Sbjct: 10 DEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISC 69
Query: 126 YCNRAASNNKLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAE 185
N A NK K+Y A+ +KID + KA ++G+A + A E KAA
Sbjct: 70 NLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAAS 129
Query: 186 LDPNDPLYANNMQAAMSNLNNS 207
L+PN+ N+ + ++ L +
Sbjct: 130 LNPNNLDIRNSYELCVNKLKEA 151
Score = 40.0 bits (92), Expect = 7e-05
Identities = 14/115 (12%), Positives = 35/115 (30%)
Query: 60 SLFQLYYKDEVLQWYSNINFSPTEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCD 119
++ + + ++ IE NL + +A+ SK + D
Sbjct: 38 VKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID 97
Query: 120 NSNPVYYCNRAASNNKLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYK 174
+N +N + A + A ++P+ L ++ + +
Sbjct: 98 KNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEAR 152
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2,
p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 59.1 bits (142), Expect = 4e-11
Identities = 27/119 (22%), Positives = 41/119 (34%), Gaps = 3/119 (2%)
Query: 88 EAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQ 147
EA N G A + + A+ +S D + N LKN A +
Sbjct: 4 EAISLWNEGVLAADKKDWKGALDAFSAVQD---PHSRICFNIGCMYTILKNMTEAEKAFT 60
Query: 148 IAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLNN 206
+I D H A AY + G+ Y Q Y A++ +A + L + L
Sbjct: 61 RSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFA 119
Score = 54.5 bits (130), Expect = 1e-09
Identities = 20/134 (14%), Positives = 43/134 (32%), Gaps = 18/134 (13%)
Query: 89 AEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQI 148
+ N+G +A ++++I+ D V Y R + + Y LA++D +
Sbjct: 36 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKE 95
Query: 149 AIKIDPHYA----------------KAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPL 192
A+ + + Y + ++K A E A +
Sbjct: 96 ALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 155
Query: 193 YANNMQAAMSNLNN 206
+ + AM +
Sbjct: 156 --SKIDKAMECVWK 167
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 56.2 bits (134), Expect = 3e-10
Identities = 28/141 (19%), Positives = 56/141 (39%), Gaps = 15/141 (10%)
Query: 82 TEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNP---------------VYY 126
+EE ++ K G ++ K +QA+++Y K + +
Sbjct: 6 SEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASH 65
Query: 127 CNRAASNNKLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAEL 186
N A + KL+ + A+ C A+++D + K R G A+ +ND++ A + K +L
Sbjct: 66 LNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQL 125
Query: 187 DPNDPLYANNMQAAMSNLNNS 207
PN+ + +
Sbjct: 126 YPNNKAAKTQLAVCQQRIRRQ 146
Score = 39.3 bits (90), Expect = 2e-04
Identities = 25/132 (18%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Query: 65 YYKDEVLQWYSNINFSPTEEVKIEAEK---YKNLGNTAMQQDKPEQAVIEYSKAIDCDNS 121
YK V +FS E K +A + + NL ++ A+ +KA++ D++
Sbjct: 35 QYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSN 94
Query: 122 NPVYYCNRAASNNKLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYKAALEA-- 179
N R ++ + +++LA D Q +++ P+ A ++ + ++ A +
Sbjct: 95 NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLY 154
Query: 180 ---YTKAAELDP 188
+ + AE +
Sbjct: 155 ANMFERLAEEEN 166
Score = 28.9 bits (63), Expect = 0.62
Identities = 16/138 (11%), Positives = 38/138 (27%), Gaps = 12/138 (8%)
Query: 19 ELLRDTLNAESKEG-IEVAVECLCKAYDIPDNIDPASNVDIES-----------LFQLYY 66
++++ KEG + A+ K + SN + + L +
Sbjct: 14 TIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHL 73
Query: 67 KDEVLQWYSNINFSPTEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYY 126
K + E + G + + E A ++ K + +N
Sbjct: 74 KLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 133
Query: 127 CNRAASNNKLKNYKLALR 144
A +++ +
Sbjct: 134 TQLAVCQQRIRRQLAREK 151
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId:
562]}
Length = 259
Score = 54.8 bits (130), Expect = 2e-09
Identities = 11/114 (9%), Positives = 38/114 (33%)
Query: 92 YKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIAIK 151
+ L + + + ++ + ++ + D + + ++ + D
Sbjct: 144 WLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTS 203
Query: 152 IDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLN 205
+ H ++ +G Y + D +A + A + ++ + +S L
Sbjct: 204 LAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLG 257
Score = 48.3 bits (113), Expect = 4e-07
Identities = 29/153 (18%), Positives = 50/153 (32%)
Query: 54 SNVDIESLFQLYYKDEVLQWYSNINFSPTEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYS 113
S V L ++ +L I S A+ G A ++S
Sbjct: 2 SEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFS 61
Query: 114 KAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDY 173
+A+ P + + N+ A +++DP Y A+ G+A
Sbjct: 62 QALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRD 121
Query: 174 KAALEAYTKAAELDPNDPLYANNMQAAMSNLNN 206
K A + + DPNDP + + A L+
Sbjct: 122 KLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDE 154
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 52.1 bits (123), Expect = 2e-08
Identities = 16/116 (13%), Positives = 48/116 (41%)
Query: 92 YKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIAIK 151
LG + ++AV ++ A+ ++ + + A+ + A+ + A++
Sbjct: 175 QCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALE 234
Query: 152 IDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLNNS 207
+ P Y ++ +G++ + ++ A+E + +A + A N+ ++
Sbjct: 235 LQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWST 290
Score = 50.6 bits (119), Expect = 9e-08
Identities = 14/116 (12%), Positives = 38/116 (32%)
Query: 88 EAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQ 147
+ + G +Q+ AV+ + A+ D + + + + + LA+ +
Sbjct: 18 DHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALR 77
Query: 148 IAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSN 203
+++ P A + +++T + + A E P +
Sbjct: 78 RCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGG 133
Score = 44.4 bits (103), Expect = 9e-06
Identities = 22/159 (13%), Positives = 43/159 (27%), Gaps = 13/159 (8%)
Query: 36 AVECLCKAYDIPDNIDPASNVDIESLFQLYYKDEVLQWYSNINFSPTEEVKIEAEKYKNL 95
E A + L L+ + + + + L
Sbjct: 155 VKELFLAAVRLDPTSID--PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKL 212
Query: 96 GNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIAIKIDPH 155
G T ++ E+AV Y +A++ N S L ++ A+ A+ +
Sbjct: 213 GATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRK 272
Query: 156 YAKAYGR-----------MGLAYTQMNDYKAALEAYTKA 183
G + LA + + A A +
Sbjct: 273 SRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADARD 311
Score = 40.2 bits (92), Expect = 2e-04
Identities = 17/128 (13%), Positives = 34/128 (26%), Gaps = 15/128 (11%)
Query: 89 AEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQI 148
E ++ LG T + ++ A+ + ++ N A S + A +
Sbjct: 53 MEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRD 112
Query: 149 AIKIDPHYAKAYGRMGLA---------------YTQMNDYKAALEAYTKAAELDPNDPLY 193
++ P YA + + E + A LDP
Sbjct: 113 WLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDP 172
Query: 194 ANNMQAAM 201
+
Sbjct: 173 DVQCGLGV 180
Score = 37.5 bits (85), Expect = 0.002
Identities = 8/43 (18%), Positives = 13/43 (30%)
Query: 164 GLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLNN 206
GL Q D A+ + A + DP + +
Sbjct: 26 GLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQ 68
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase
alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 50.7 bits (120), Expect = 7e-08
Identities = 7/58 (12%), Positives = 18/58 (31%)
Query: 148 IAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLN 205
+ I + Y + + A + A EL+ + + + + +L
Sbjct: 34 VQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQ 91
Score = 48.8 bits (115), Expect = 3e-07
Identities = 21/187 (11%), Positives = 56/187 (29%), Gaps = 11/187 (5%)
Query: 28 ESKEGIEVAVECLCKAYDI-PDNIDPASNVDIESLFQLYYKDEVLQWYSNINFSPTEEVK 86
+ E E A + A ++ N + E + + + I +
Sbjct: 54 QRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNY- 112
Query: 87 IEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDC 146
+ + + P Q + + ++ D N + +R + K + L+
Sbjct: 113 ---QVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYV 169
Query: 147 QIAIKIDPHYAKAYGRMGLAYTQMNDYK------AALEAYTKAAELDPNDPLYANNMQAA 200
+K D + + + Y ++ + +L P++ N ++
Sbjct: 170 DQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGI 229
Query: 201 MSNLNNS 207
+ + S
Sbjct: 230 LQDRGLS 236
Score = 48.8 bits (115), Expect = 3e-07
Identities = 16/123 (13%), Positives = 36/123 (29%), Gaps = 1/123 (0%)
Query: 89 AEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKL-KNYKLALRDCQ 147
+ Y + ++ E+A AI+ + +N + R L K+ +
Sbjct: 43 RDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYIT 102
Query: 148 IAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLNNS 207
I+ P + + + + D LE D + + Q +
Sbjct: 103 AIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLW 162
Query: 208 SSA 210
+
Sbjct: 163 DNE 165
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium
tepidum [TaxId: 1097]}
Length = 156
Score = 43.6 bits (101), Expect = 5e-06
Identities = 18/156 (11%), Positives = 43/156 (27%), Gaps = 24/156 (15%)
Query: 81 PTEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAID------------CDNSNPVYYCN 128
P +EV A + + + ++A +A++ + +
Sbjct: 2 PLKEVV-GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAG 60
Query: 129 RAASNNKLKNYKLALRDCQIAIKIDPHYAKAYG-----------RMGLAYTQMNDYKAAL 177
A + L+++ AL A+ + LA + A+
Sbjct: 61 LAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAM 120
Query: 178 EAYTKAAELDPNDPLYANNMQAAMSNLNNSSSASGS 213
+ K E+ + M + + G+
Sbjct: 121 PEFKKVVEMIEERKGETPGKERMMEVAIDRIAQLGA 156
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 122
Score = 42.4 bits (99), Expect = 7e-06
Identities = 6/117 (5%), Positives = 31/117 (26%), Gaps = 5/117 (4%)
Query: 94 NLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRA---ASNNKLKNYKLALRDCQIAI 150
+ N + + + ++ + + A + + + + +
Sbjct: 4 AVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELL 63
Query: 151 KI--DPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLN 205
+ + ++ +Y+ AL+ + +P + + +
Sbjct: 64 PKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMK 120
Score = 28.1 bits (62), Expect = 0.72
Identities = 5/49 (10%), Positives = 14/49 (28%)
Query: 89 AEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLK 137
+ L + + E+A+ + + N + +K
Sbjct: 72 RDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMK 120
Score = 27.0 bits (59), Expect = 1.4
Identities = 1/41 (2%), Positives = 5/41 (12%)
Query: 166 AYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLNN 206
+ D + + +
Sbjct: 8 ELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRY 48
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR,
middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 179
Score = 42.5 bits (99), Expect = 1e-05
Identities = 17/125 (13%), Positives = 33/125 (26%), Gaps = 22/125 (17%)
Query: 88 EAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNP----------------------VY 125
K G A + EQA S A+ +
Sbjct: 10 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLA 69
Query: 126 YCNRAASNNKLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAE 185
+ +A + + + + P+ + ++ AY + AL AY +
Sbjct: 70 HTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 129
Query: 186 LDPND 190
+D
Sbjct: 130 TLADD 134
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 40.6 bits (94), Expect = 2e-05
Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 7/89 (7%)
Query: 89 AEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVY-------YCNRAASNNKLKNYKL 141
AE LG A + + +A+ + + + + + +
Sbjct: 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDK 64
Query: 142 ALRDCQIAIKIDPHYAKAYGRMGLAYTQM 170
AL + +++DP + +A G + M
Sbjct: 65 ALLLTKKLLELDPEHQRANGNLKYFEYIM 93
Score = 25.9 bits (56), Expect = 2.2
Identities = 8/80 (10%), Positives = 18/80 (22%), Gaps = 3/80 (3%)
Query: 61 LFQLYYKDEVLQWY---SNINFSPTEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAID 117
+ W + L QQ ++A++ K ++
Sbjct: 15 AYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE 74
Query: 118 CDNSNPVYYCNRAASNNKLK 137
D + N +
Sbjct: 75 LDPEHQRANGNLKYFEYIMA 94
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III
{Escherichia coli [TaxId: 562]}
Length = 366
Score = 41.4 bits (95), Expect = 8e-05
Identities = 16/128 (12%), Positives = 32/128 (25%), Gaps = 11/128 (8%)
Query: 87 IEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVY-----YCNRAASNNKLKNYKL 141
+ AE A+ P++A A++ Y +
Sbjct: 10 MHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTR 69
Query: 142 ALRDCQIAIKID------PHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYAN 195
+L Q ++ + + + + A E KA +L L
Sbjct: 70 SLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL 129
Query: 196 NMQAAMSN 203
M +
Sbjct: 130 PMHEFLVR 137
Score = 39.9 bits (91), Expect = 3e-04
Identities = 13/93 (13%), Positives = 30/93 (32%), Gaps = 5/93 (5%)
Query: 114 KAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIAIKIDP-----HYAKAYGRMGLAYT 168
K I D + + RA N A R ++A++ P A +G
Sbjct: 3 KDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLH 62
Query: 169 QMNDYKAALEAYTKAAELDPNDPLYANNMQAAM 201
+ +L + ++ ++ + + +
Sbjct: 63 CKGELTRSLALMQQTEQMARQHDVWHYALWSLI 95
Score = 32.6 bits (72), Expect = 0.056
Identities = 12/64 (18%), Positives = 17/64 (26%), Gaps = 2/64 (3%)
Query: 149 AIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAMSNLNNSS 208
I+ D +A+ + A A E P Y+ A S L
Sbjct: 4 DIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSR--IVATSVLGEVL 61
Query: 209 SASG 212
G
Sbjct: 62 HCKG 65
Score = 30.3 bits (66), Expect = 0.31
Identities = 12/149 (8%), Positives = 32/149 (21%), Gaps = 15/149 (10%)
Query: 68 DEVLQWYSN-INFSPTEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYY 126
DE + + P LG + + +++ + + V++
Sbjct: 29 DEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWH 88
Query: 127 ------CNRAASNNKLKNYKLALRDCQIAIKIDPHY--------AKAYGRMGLAYTQMND 172
++ + A + A ++
Sbjct: 89 YALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWAR 148
Query: 173 YKAALEAYTKAAELDPNDPLYANNMQAAM 201
A + E+ + AM
Sbjct: 149 LDEAEASARSGIEVLSSYQPQQQLQCLAM 177
Score = 25.6 bits (54), Expect = 9.2
Identities = 6/86 (6%), Positives = 15/86 (17%), Gaps = 6/86 (6%)
Query: 38 ECLCKAYDIPDNIDPASNVDIESLFQLYYKDEVLQWYSNI------NFSPTEEVKIEAEK 91
L + ++ + + + N +
Sbjct: 234 NWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRN 293
Query: 92 YKNLGNTAMQQDKPEQAVIEYSKAID 117
L Q + A A+
Sbjct: 294 LLLLNQLYWQAGRKSDAQRVLLDALK 319
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 290
Score = 40.0 bits (92), Expect = 2e-04
Identities = 15/138 (10%), Positives = 33/138 (23%), Gaps = 13/138 (9%)
Query: 88 EAEKYKNLGNTAMQQDKPEQAV-------IEYSKAIDCDNSNPVYYCNRAASNNKLKNYK 140
Y AV ++ + N L +Y
Sbjct: 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYA 135
Query: 141 LALRDCQIAIKI------DPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLYA 194
A+ ++A + K + + Y A + Y+K + + L
Sbjct: 136 KAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQ 195
Query: 195 NNMQAAMSNLNNSSSASG 212
+++ A+
Sbjct: 196 WSLKDYFLKKGLCQLAAT 213
Score = 38.8 bits (89), Expect = 5e-04
Identities = 17/111 (15%), Positives = 31/111 (27%), Gaps = 14/111 (12%)
Query: 92 YKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIA-- 149
+ + + +A YSK I N + + K +LA D A
Sbjct: 161 FIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAAR 220
Query: 150 -----IKIDPHYA-----KAYGRMGLAYTQMN--DYKAALEAYTKAAELDP 188
DP++A + A + + + + LD
Sbjct: 221 TLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDK 271
Score = 32.6 bits (73), Expect = 0.044
Identities = 6/33 (18%), Positives = 12/33 (36%)
Query: 157 AKAYGRMGLAYTQMNDYKAALEAYTKAAELDPN 189
A + Y + A +++ KAA+
Sbjct: 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKK 69
Score = 32.6 bits (73), Expect = 0.051
Identities = 10/127 (7%), Positives = 29/127 (22%), Gaps = 28/127 (22%)
Query: 73 WYSNINFSPTEEVKIEAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAAS 132
+ + S + + + A+ + + A + KA
Sbjct: 21 FMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSFLKAA---------------- 64
Query: 133 NNKLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPL 192
D Q + Y + + A+++ A ++ +
Sbjct: 65 ------------DYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQ 112
Query: 193 YANNMQA 199
+
Sbjct: 113 FRRGANF 119
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC)
{Helicobacter pylori [TaxId: 210]}
Length = 265
Score = 36.0 bits (81), Expect = 0.004
Identities = 8/37 (21%), Positives = 15/37 (40%)
Query: 157 AKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPLY 193
K +G + D+ A + + KA +L N +
Sbjct: 2 PKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCF 38
Score = 28.7 bits (62), Expect = 0.77
Identities = 7/39 (17%), Positives = 17/39 (43%)
Query: 88 EAEKYKNLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYY 126
+ ++ LG + ++ QA + KA D ++ +
Sbjct: 1 DPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFN 39
Score = 27.2 bits (58), Expect = 3.0
Identities = 6/36 (16%), Positives = 11/36 (30%), Gaps = 4/36 (11%)
Query: 155 HYAKAYGRMGLAYTQ----MNDYKAALEAYTKAAEL 186
+G + K A+E + K +L
Sbjct: 212 ENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKL 247
Score = 26.4 bits (56), Expect = 4.2
Identities = 8/46 (17%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 122 NPVYYCNRAASNNKLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAY 167
+P A + K K++ A + + A + +G+ Y
Sbjct: 1 DPKELVGLGAKSYKEKDFTQAKKYFEKACDLK--ENSGCFNLGVLY 44
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 124
Score = 30.1 bits (68), Expect = 0.13
Identities = 6/63 (9%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Query: 134 NKLKNYKLALRDCQIAIKIDP-HYAKAYGRMGLAYTQMNDYKAALEAYTKAAELDPNDPL 192
+ + +L ++ K + + + ++ +Y A E + N+
Sbjct: 49 TDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQ 108
Query: 193 YAN 195
Sbjct: 109 VGA 111
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit
tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 145
Score = 30.2 bits (66), Expect = 0.18
Identities = 2/39 (5%), Positives = 11/39 (28%)
Query: 163 MGLAYTQMNDYKAALEAYTKAAELDPNDPLYANNMQAAM 201
+ ++ ++ + + +P D +
Sbjct: 3 TETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVL 41
Score = 27.1 bits (58), Expect = 1.8
Identities = 6/46 (13%), Positives = 19/46 (41%)
Query: 128 NRAASNNKLKNYKLALRDCQIAIKIDPHYAKAYGRMGLAYTQMNDY 173
+ +++ ++ +D + K +P A R G +++ +
Sbjct: 2 DTETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQF 47
Score = 25.2 bits (53), Expect = 7.7
Identities = 6/87 (6%), Positives = 20/87 (22%)
Query: 94 NLGNTAMQQDKPEQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIAIKID 153
+ + EQ + + + +L + Q+ +
Sbjct: 2 DTETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAI 61
Query: 154 PHYAKAYGRMGLAYTQMNDYKAALEAY 180
+ +A + A ++
Sbjct: 62 TKFEEALLIDPKKDEAVWCIGNAYTSF 88
>d1rypg_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 244
Score = 27.3 bits (60), Expect = 2.1
Identities = 9/49 (18%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 10 TSVITFLRKELLRDTLNAESKEGIEVAVECLCKAYDIPDNIDPASNVDI 58
S L K + ++E ++ A + + A++ DN + ++I
Sbjct: 166 QSAKAELEKLVDHHPEGLSAREAVKQAAKIIYLAHE--DNKEKDFELEI 212
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A
{Acidaminococcus fermentans [TaxId: 905]}
Length = 259
Score = 27.5 bits (60), Expect = 2.1
Identities = 26/140 (18%), Positives = 40/140 (28%), Gaps = 17/140 (12%)
Query: 48 DNIDPASNVDIESLFQLY--YKDEVLQWYSNINFSPTEEVKIEAEKYKNLGNTAMQQDKP 105
D + V + L +L V + F+ +E + ++ + A
Sbjct: 135 DVMANILEVKVSDLAELGAKSTKRVAISSTCTVFAESEVISQLSKGTDKIDIIAGIHRSV 194
Query: 106 EQAVIEYSKAIDCDNSNPVYYCNRAASNNKLKNYKLALRDCQIAIKIDPHYAKAYGRMGL 165
VI A V A N ++ +I Y A G
Sbjct: 195 ASRVIG--LANRVGIVKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALG---- 248
Query: 166 AYTQMNDYKAALEAYTKAAE 185
AAL AY KAA+
Sbjct: 249 ---------AALYAYKKAAK 259
>d1wz3a1 d.15.1.7 (A:10-93) Autophagy-related protein 12b (APG12b)
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 84
Score = 25.3 bits (56), Expect = 3.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 2 SIKPEDIITSVITFLRKELLRDTL 25
+ D +VI FLR++L D+L
Sbjct: 22 KVSGSDKFANVIDFLRRQLHSDSL 45
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB)
{Helicobacter pylori [TaxId: 210]}
Length = 133
Score = 25.9 bits (55), Expect = 4.8
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 172 DYKAALEAYTKAAELDPNDPLYANNM 197
D K A++ Y KA EL+ +
Sbjct: 8 DLKKAIQYYVKACELNEMFGCLSLVS 33
>d2f4mb1 a.189.1.1 (B:275-332) XPC-binding domain of Rad23 homolog B
(Hhr23b) {Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 23.8 bits (52), Expect = 7.6
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 266 QQIAAQLEQRNPELVEQIFQ 285
+ Q+ + NP+L++QI Q
Sbjct: 26 PALLQQIGRENPQLLQQISQ 45
Score = 23.4 bits (51), Expect = 9.9
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 258 IQALLNASQ-QIAAQLEQRNPELVEQIFQQFG 288
++ L N Q Q Q+ Q+NP L+ + QQ G
Sbjct: 2 LEFLRNQPQFQQMRQIIQQNPSLLPALLQQIG 33
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.311 0.128 0.360
Gapped
Lambda K H
0.267 0.0663 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,132,120
Number of extensions: 51902
Number of successful extensions: 252
Number of sequences better than 10.0: 1
Number of HSP's gapped: 204
Number of HSP's successfully gapped: 87
Length of query: 314
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 229
Effective length of database: 1,240,546
Effective search space: 284085034
Effective search space used: 284085034
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 53 (24.3 bits)