BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4132
(473 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/79 (84%), Positives = 76/79 (96%)
Query: 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQG 297
+I+RLGKRF+KLDLDNSG+LS++EFMSLPELQQNPLVQRVIDIFD D NGEVDFKEFI+G
Sbjct: 19 EIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEG 78
Query: 298 VSQFSVKGDRESKLKFAFR 316
VSQFSVKGD+E KL+FAFR
Sbjct: 79 VSQFSVKGDKEQKLRFAFR 97
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 29/32 (90%)
Query: 208 DSNKDRDGKINFQEFCSIVGNTDIHKKMVVDI 239
+++KD DG+I+F+EFC++VG DIHKKMVVD+
Sbjct: 139 NADKDGDGRISFEEFCAVVGGLDIHKKMVVDV 170
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/79 (84%), Positives = 76/79 (96%)
Query: 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQG 297
+I+RLGKRF+KLDLDNSG+LS++EFMSLPELQQNPLVQRVIDIFD D NGEVDFKEFI+G
Sbjct: 18 EIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEG 77
Query: 298 VSQFSVKGDRESKLKFAFR 316
VSQFSVKGD+E KL+FAFR
Sbjct: 78 VSQFSVKGDKEQKLRFAFR 96
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 29/32 (90%)
Query: 208 DSNKDRDGKINFQEFCSIVGNTDIHKKMVVDI 239
+++KD DG+I+F+EFC++VG DIHKKMVVD+
Sbjct: 138 NADKDGDGRISFEEFCAVVGGLDIHKKMVVDV 169
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/79 (84%), Positives = 76/79 (96%)
Query: 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQG 297
+I+RLGKRF+KLDLDNSG+LS++EFMSLPELQQNPLVQRVIDIFD D NGEVDFKEFI+G
Sbjct: 5 EIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEG 64
Query: 298 VSQFSVKGDRESKLKFAFR 316
VSQFSVKGD+E KL+FAFR
Sbjct: 65 VSQFSVKGDKEQKLRFAFR 83
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 29/32 (90%)
Query: 208 DSNKDRDGKINFQEFCSIVGNTDIHKKMVVDI 239
+++KD DG+I+F+EFC++VG DIHKKMVVD+
Sbjct: 125 NADKDGDGRISFEEFCAVVGGLDIHKKMVVDV 156
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/79 (84%), Positives = 76/79 (96%)
Query: 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQG 297
+I+RLGKRF+KLDLDNSG+LS++EFMSLPELQQNPLVQRVIDIFD D NGEVDFKEFI+G
Sbjct: 4 EIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEG 63
Query: 298 VSQFSVKGDRESKLKFAFR 316
VSQFSVKGD+E KL+FAFR
Sbjct: 64 VSQFSVKGDKEQKLRFAFR 82
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 29/32 (90%)
Query: 208 DSNKDRDGKINFQEFCSIVGNTDIHKKMVVDI 239
+++KD DG+I+F+EFC++VG DIHKKMVVD+
Sbjct: 124 NADKDGDGRISFEEFCAVVGGLDIHKKMVVDV 155
>pdb|2ZME|B Chain B, Integrated Structural And Functional Model Of The Human
Escrt-Ii Complex
Length = 238
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 94/140 (67%), Gaps = 1/140 (0%)
Query: 330 LGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYL 389
L +L L PL GG M LT+ YC +NRARG+ELLSPEDL+N+C L+ L P+ L
Sbjct: 97 LAKQLAGILQVPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEAL-KLPLRL 155
Query: 390 KTYSSGVKVLQLKSCEDASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETH 449
+ + SGV V++L+S ++ V E VS+ +T E+F++L +S+++AK RLLLAE
Sbjct: 156 RVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKM 215
Query: 450 GKLCRDQSIEGLRFYENKFL 469
G LCRD S+EGLRFY N F+
Sbjct: 216 GHLCRDDSVEGLRFYPNLFM 235
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 149 TGIVGIERNIVEKQKETSSNINNAFKDLNQLMSMAKEMVEXXXXXXXXXXXRQGEITEDD 208
GIVGIER + EK+KET NI+ AF+DL++LM AKEMVE +QG+ITED+
Sbjct: 6 VGIVGIERKLEEKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANKIKDKQGDITEDE 65
Query: 209 S 209
+
Sbjct: 66 T 66
>pdb|3CUQ|B Chain B, Integrated Structural And Functional Model Of The Human
Escrt-Ii Complex
Length = 218
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 94/140 (67%), Gaps = 1/140 (0%)
Query: 330 LGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYL 389
L +L L PL GG M LT+ YC +NRARG+ELLSPEDL+N+C L+ L P+ L
Sbjct: 77 LAKQLAGILQVPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEAL-KLPLRL 135
Query: 390 KTYSSGVKVLQLKSCEDASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETH 449
+ + SGV V++L+S ++ V E VS+ +T E+F++L +S+++AK RLLLAE
Sbjct: 136 RVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKM 195
Query: 450 GKLCRDQSIEGLRFYENKFL 469
G LCRD S+EGLRFY N F+
Sbjct: 196 GHLCRDDSVEGLRFYPNLFM 215
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 164 ETSSNINNAFKDLNQLMSMAKEMVEXXXXXXXXXXXRQGEITEDDS 209
ET NI+ AF+DL++LM AKEMVE +QG+ITED++
Sbjct: 1 ETDKNISEAFEDLSKLMIKAKEMVELSKSIANKIKDKQGDITEDET 46
>pdb|2HTH|B Chain B, Structural Basis For Ubiquitin Recognition By The Human
Eap45ESCRT-Ii Glue Domain
Length = 140
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Query: 1 MDRFEYCSFELSPDESPVLKHSNVRLYDGENKSQFQRGELILTSHRLFW--QKDITLCLA 58
MDRF + S L +E+ V++ VR+YDGE K +F G L+L++HRL W QK+ C+A
Sbjct: 3 MDRFVWTSGLLEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKNHECCMA 62
Query: 59 LSYIQNA-VEEAKSMFNLTAGRKIILYLSKAVPGKNLGPSATSAYDYVKLSFREGIQNEF 117
+ Q +EE + +A KI+++L A P K GP +S Y+KLSF+E Q EF
Sbjct: 63 ILLSQIVFIEEQAAGIGKSA--KIVVHLHPAPPNKEPGPFQSSKNSYIKLSFKEHGQIEF 120
Query: 118 LDALKSTVDAKIW 130
L + + W
Sbjct: 121 YRRLSEEMTQRRW 133
>pdb|2DX5|A Chain A, The Complex Structure Between The Mouse Eap45-Glue Domain
And Ubiquitin
Length = 139
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 1 MDRFEYCSFELSPDESPVLKHSNVRLYDGENKSQFQRGELILTSHRLFW--QKDITLCLA 58
MDRF + S L +E+ V++ VR+YDGE K +F G L+L++HRL W QK+ C+A
Sbjct: 1 MDRFVWTSGLLEINETLVIQQRGVRVYDGEEKIKFDAGTLLLSTHRLIWRDQKNNECCMA 60
Query: 59 LSYIQNA-VEEAKSMFNLTAGRKIILYLSKAVPGKNLGPSATSAYDYVKLSFREGIQNEF 117
+ Q +EE + +A KI+++L A K GP +S Y++LSF+E Q EF
Sbjct: 61 IPLSQIVFIEEQAAGIGKSA--KIVVHLHPAPSNKEPGPFQSSKNSYIRLSFKEHGQIEF 118
Query: 118 LDALKSTVDAKIW 130
L + + W
Sbjct: 119 YRRLSEEMTQRRW 131
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 15/93 (16%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGV 298
I RL RF LD +G LS ++F +PEL NPL R+I+ F + +V+F+ F++ +
Sbjct: 28 ITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSEGEDQVNFRGFMRTL 87
Query: 299 SQF----------SVKG-----DRESKLKFAFR 316
+ F V G R +KL FAFR
Sbjct: 88 AHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFR 120
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 15/93 (16%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGV 298
I RL RF LD +G LS ++F +PEL NPL R+I+ F + +V+F+ F++ +
Sbjct: 28 ITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFPEGEDQVNFRGFMRTL 87
Query: 299 SQF----------SVKG-----DRESKLKFAFR 316
+ F V G R +KL FAFR
Sbjct: 88 AHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFR 120
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 212 DRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQ-- 269
DR+G I++ EF ++ + +K ++ +L F+K D D +G +S+DE S+ L
Sbjct: 119 DRNGYIDYSEFVTVA----MDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHL 174
Query: 270 QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301
++ + +I D + +G+VDF+EF + + +
Sbjct: 175 ESKTWKEMISGIDSNNDGDVDFEEFCKMIQKL 206
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 212 DRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQ-- 269
DR+G I++ EF ++ + +K ++ +L F+K D D +G +S+DE S+ L
Sbjct: 402 DRNGYIDYSEFVTVA----MDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHL 457
Query: 270 QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301
++ + +I D + +G+VDF+EF + + +
Sbjct: 458 ESKTWKEMISGIDSNNDGDVDFEEFCKMIQKL 489
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 212 DRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQ- 270
D++G I + EF ++ + +K ++ RL + FR D DNSG +S E ++ +
Sbjct: 394 DKNGYIEYSEFVTVAXD----RKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVSDV 449
Query: 271 -NPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+ + V+ D++ +GEVDF EF Q
Sbjct: 450 DSETWKSVLSEVDKNNDGEVDFDEFQQ 476
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 212 DRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQ- 270
D++G I + EF ++ + +K ++ RL + FR D DNSG +S E ++ +
Sbjct: 417 DKNGYIEYSEFVTVA----MDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV 472
Query: 271 -NPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+ + V+ D++ +GEVDF EF Q
Sbjct: 473 DSETWKSVLSEVDKNNDGEVDFDEFQQ 499
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 212 DRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQ- 270
D++G I + EF ++ + +K ++ RL + FR D DNSG +S E ++ +
Sbjct: 418 DKNGYIEYSEFVTVA----MDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV 473
Query: 271 -NPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+ + V+ D++ +GEVDF EF Q
Sbjct: 474 DSETWKSVLSEVDKNNDGEVDFDEFQQ 500
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 212 DRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQ- 270
D++G I + EF ++ + +K ++ RL + FR D DNSG +S E ++ +
Sbjct: 394 DKNGYIEYSEFVTVA----MDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV 449
Query: 271 -NPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+ + V+ D++ +GEVDF EF Q
Sbjct: 450 DSETWKSVLSEVDKNNDGEVDFDEFQQ 476
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 212 DRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSL-----P 266
D G I + EF + + I + +++ R+ + F+ D D SG +S E L
Sbjct: 393 DGSGSIEYSEFIA----SAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADS 448
Query: 267 ELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301
+Q L + +I+ D +++GEVDF EF++ + F
Sbjct: 449 SIQMEEL-ESIIEQVDNNKDGEVDFNEFVEMLQNF 482
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 212 DRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQ- 270
DR+G I + EF ++ + K++++ RL F++ D D SG ++ +E L + +
Sbjct: 373 DRNGYIEYSEFVTVC----MDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEV 428
Query: 271 -NPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+ +V+ D++ +GEVDF+EF++
Sbjct: 429 DDETWHQVLQECDKNNDGEVDFEEFVE 455
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 212 DRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQ- 270
DR+G I + EF ++ + K++++ RL F++ D D SG ++ +E L + +
Sbjct: 99 DRNGYIEYSEFVTVC----MDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEV 154
Query: 271 -NPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+ +V+ D++ +GEVDF+EF++
Sbjct: 155 DDETWHQVLQECDKNNDGEVDFEEFVE 181
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 269 QQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRXXXXXXXXXXXQ 328
++N R+ D+FD RNG ++F EF++ + F K+KFAF+ +
Sbjct: 71 RRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIER 130
Query: 329 ALGNELIAALI 339
E++ AL+
Sbjct: 131 EELKEMVVALL 141
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 269 QQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRXXXXXXXXXXXQ 328
++N R+ D+FD RNG ++F EF++ + F K+KFAF+ +
Sbjct: 71 RRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIER 130
Query: 329 ALGNELIAALI 339
E++ AL+
Sbjct: 131 EELKEMVVALL 141
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 241 RLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300
RL RFR LD + G LS + + L NPL R+I+ F D + VDF F++ ++
Sbjct: 30 RLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGDRIIESFFPDGSQRVDFPGFVRVLAH 89
Query: 301 F 301
F
Sbjct: 90 F 90
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 26/107 (24%)
Query: 210 NKDRDGKINFQEF-C--SIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFM--- 263
+ D++G I+F+EF C S+ +++ K++ F+ DLDN+G +S DE +
Sbjct: 73 DADKNGYIDFKEFICALSVTSRGELNDKLIW-------AFQLYDLDNNGLISYDEMLRIV 125
Query: 264 -----------SLPELQQNP--LVQRVIDIFDEDRNGEVDFKEFIQG 297
LPE + P V ++ ++ D++++G++ +EF +G
Sbjct: 126 DAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEG 172
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 254 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308
SG L+ EF + P + + V ++FD D+NG +DFKEFI +S S +G+
Sbjct: 40 SGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTS-RGELN 98
Query: 309 SKLKFAFR 316
KL +AF+
Sbjct: 99 DKLIWAFQ 106
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 246 FRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEFIQGVSQF 301
F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF+ ++++
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARW 376
Query: 302 SVKGDRESKLKFAFR 316
D E +++ AFR
Sbjct: 377 MKDTDSEEEIREAFR 391
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ +IR + FR D D +G +S E +L
Sbjct: 357 DADGNGTIDFPEFLTMMARWMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 413
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 414 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E KLK AFR
Sbjct: 69 LNLMARKMKDTDSEEKLKEAFR 90
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD +K L + FR D D +G +S E
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEK-------LKEAFRVFDKDGNGFISAAELRHV 108
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 109 MTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQ 143
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 254 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308
SG LS++EF + P + + V FD + +G +DF+EFI +S S +G E
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTS-RGKLE 98
Query: 309 SKLKFAF 315
KLK+AF
Sbjct: 99 QKLKWAF 105
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
Query: 214 DGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALS--------------I 259
DG I+F+EF + T K ++L F DLD +G +S +
Sbjct: 77 DGTIDFREFIIALSVTSRGKLE----QKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMV 132
Query: 260 DEFMSLPELQQNP--LVQRVIDIFDEDRNGEVDFKEFIQGV 298
M +PE + P +++ D +R+G++ +EFI+G
Sbjct: 133 SSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGA 173
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 6 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 65
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +LK AFR
Sbjct: 66 LNLMARKMKDTDSEEELKEAFR 87
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ L + FR D D +G +S E
Sbjct: 53 DADGNGTIDFPEFLNLMARKMKDTDSEEE-------LKEAFRVFDKDGNGFISAAELRHV 105
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 106 MTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQ 140
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +LK AFR
Sbjct: 70 LNLMARKMKDTDSEEELKEAFR 91
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ L + FR D D +G +S E
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEE-------LKEAFRVFDKDQNGFISAAELRHV 109
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+++++EF++
Sbjct: 110 MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +LK AFR
Sbjct: 70 LNLMARKMKDTDSEEELKEAFR 91
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +LK AFR
Sbjct: 69 LNLMARKMKDTDSEEELKEAFR 90
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ L + FR D D +G +S E
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEE-------LKEAFRVFDKDGNGFISAAELRHV 108
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 109 MTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQ 143
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 246 FRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEFIQGVSQF 301
F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF+ +++
Sbjct: 318 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 377
Query: 302 SVKGDRESKLKFAFR 316
D E +++ AFR
Sbjct: 378 MKDTDSEEEIREAFR 392
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ +IR + FR D D +G +S E +L
Sbjct: 358 DADGNGTIDFPEFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 414
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 415 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 445
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 246 FRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEFIQGVSQF 301
F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF+ +++
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 376
Query: 302 SVKGDRESKLKFAFR 316
D E +++ AFR
Sbjct: 377 MKDTDSEEEIREAFR 391
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ +IR + FR D D +G +S E +L
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 413
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 414 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 246 FRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEFIQGVSQF 301
F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF+ +++
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 376
Query: 302 SVKGDRESKLKFAFR 316
D E +++ AFR
Sbjct: 377 MKDTDSEEEIREAFR 391
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ +IR + FR D D +G +S E +L
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 413
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 414 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 277 VIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFR 316
V ++FDE+++G ++F EFIQ +S S +G + KL++AF+
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTS-RGTLDEKLRWAFK 106
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMS----- 264
++++DG+I F EF + + + +D +L F+ DLDN G ++ +E +
Sbjct: 73 DENKDGRIEFSEFIQALS---VTSRGTLD-EKLRWAFKLYDLDNDGYITRNEMLDIVDAI 128
Query: 265 ---------LPELQQNP--LVQRVIDIFDEDRNGEVDFKEFIQG 297
LPE + P V R+ + D++ +G++ +EF +G
Sbjct: 129 YQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEG 172
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 27/149 (18%)
Query: 254 SGALSIDEFMSLPELQ-----QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308
SG ++ EF +L LQ N + +V + FD +++G VDF EFI V+ ++ E
Sbjct: 34 SGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVN-LIMQEKME 92
Query: 309 SKLKFAFRXXXXXXXXXXXQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLS 368
KLK+ F+ + NEL+ D + + G + LS
Sbjct: 93 QKLKWYFKLYDADGNGSIDK---NELL-----------------DMFMAVQALNGQQTLS 132
Query: 369 PEDLLNSCL-ALDKLPDSPIYLKTYSSGV 396
PE+ +N +D D + L+ + +G+
Sbjct: 133 PEEFINLVFHKIDINNDGELTLEEFINGM 161
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 16/103 (15%)
Query: 208 DSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALS----IDEFM 263
D+NKD G ++F EF + V N + +KM ++L F+ D D +G++ +D FM
Sbjct: 67 DTNKD--GFVDFLEFIAAV-NLIMQEKME---QKLKWYFKLYDADGNGSIDKNELLDMFM 120
Query: 264 SLPEL--QQN----PLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300
++ L QQ + V D + +GE+ +EFI G+++
Sbjct: 121 AVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 335
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 336 LTMMARKMKDTDSEEEIREAFR 357
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ +IR + FR D D +G +S E +L
Sbjct: 323 DADGNGTIDFPEFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 379
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 380 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 410
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 273 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 332
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 333 LTMMARKMKDTDSEEEIREAFR 354
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ +IR + FR D D +G +S E +L
Sbjct: 320 DADGNGTIDFPEFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 376
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 377 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 407
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 335
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 336 LTMMARKMKDTDSEEEIREAFR 357
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ +IR + FR D D +G +S E +L
Sbjct: 323 DADGNGTIDFPEFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 379
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 380 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 410
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 246 FRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEFIQGVSQF 301
F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF+ +++
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 376
Query: 302 SVKGDRESKLKFAFR 316
D E +++ AFR
Sbjct: 377 MKYTDSEEEIREAFR 391
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ + +IR + FR D D +G +S E +L
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKYTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 413
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 414 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 66
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 67 LTMMARKMKDTDSEEEIREAFR 88
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 106
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 107 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 13 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 72
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 73 LTMMARKMKDTDSEEEIREAFR 94
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 60 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 112
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 113 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 147
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 231 IHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRN 286
+ ++ +VD + + F D D G ++++E + + L QNP +Q +I D D N
Sbjct: 4 LSEEQIVDFK---EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 287 GEVDFKEFIQGVSQFSVKGDRESKLKFAFR 316
G ++F EF+ +++ D E +LK AF+
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFK 90
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSI----VGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I F EF S+ V +TD ++ L + F+ D D +G +S E
Sbjct: 56 DADGNGTIEFDEFLSLMAKKVKDTDAEEE-------LKEAFKVFDKDQNGYISASELRHV 108
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
++L E + V+++I D D +G+V+++EF++
Sbjct: 109 MINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 143
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFR 90
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ +IR + FR D D +G +S E +L
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 112
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I + D +G+V+++EF+Q
Sbjct: 113 GEKLTDEEVDEMIREANIDGDGQVNYEEFVQ 143
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFR 91
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 109
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 110 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 6 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 65
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 66 LTMMARKMKDTDSEEEIREAFR 87
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 53 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 105
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 106 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 140
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 11 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 70
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 71 LTMMARKMKDTDSEEEIREAFR 92
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 58 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 110
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 111 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 145
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFR 91
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 109
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 110 MTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFR 90
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 108
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 109 MTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFR 90
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 108
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 109 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 5 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 64
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 65 LTMMARKMKDTDSEEEIREAFR 86
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ +IR + FR D D +G +S E +L
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 108
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 109 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 139
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFR 91
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 109
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 110 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFR 91
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGFISAAELRHV 109
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFI 295
+L E + V +I D D +G+V+++EF+
Sbjct: 110 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 66
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 67 LTMMARKMKDTDSEEEIREAFR 88
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 106
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 107 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 15 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 74
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 75 LTMMARKMKDTDSEEEIREAFR 96
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 62 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 114
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 115 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 149
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 66
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 67 LTMMARKMKDTDSEEEIREAFR 88
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ +IR + FR D D +G +S E +L
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 110
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 111 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFR 90
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 108
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 109 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFR 91
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 109
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V ++I D D +G+V+++EF+Q
Sbjct: 110 MTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQ 144
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFR 90
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGFISAAELRHV 108
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFI 295
+L E + V +I D D +G+V+++EF+
Sbjct: 109 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 142
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFR 91
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 109
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 110 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFR 91
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGFISAAELRHV 109
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFI 295
+L E + V +I D D +G+V+++EF+
Sbjct: 110 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFR 90
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGFISAAELRHV 108
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFI 295
+L E + V +I D D +G+V+++EF+
Sbjct: 109 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 142
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFR 91
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGFISAAELRHV 109
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFI 295
+L E + V +I D D +G+V+++EF+
Sbjct: 110 MTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFV 143
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFR 90
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 8 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 67
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 68 LTMMARKMKDTDSEEEIREAFR 89
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D +G I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 55 DADGNGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 107
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 108 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 142
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 246 FRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEFIQGVSQF 301
F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF+ +++
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
Query: 302 SVKGDRESKLKFAFR 316
D E +++ AFR
Sbjct: 77 MKDTDSEEEIREAFR 91
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ +IR + FR D D +G +S E +L
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 113
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 114 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 241 RLGKRFRKLDLDNSGALSIDEFM--SLPE-LQQNP-LVQRVIDIFDEDRNGEVDFKEFI 295
R+ + F +D D SG L I+E M P ++ +P R++ IFD D NG + F EF+
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFM 110
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 241 RLGKRFRKLDLDNSGALSIDEFM--SLPE-LQQNP-LVQRVIDIFDEDRNGEVDFKEFI 295
R+ + F +D D SG L I+E M P ++ +P R++ IFD D NG + F EF+
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFM 110
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 265 LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299
L E+++ +V +V++ DED +GE DF+EF+ VS
Sbjct: 45 LEEIKEQEVVDKVMETLDEDGDGECDFQEFMAFVS 79
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 265 LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299
L E+++ +V +V++ DED +GE DF+EF+ VS
Sbjct: 44 LEEIKEQEVVDKVMETLDEDGDGECDFQEFMAFVS 78
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E ++ L QNP +Q I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ ++ D E +++ AFR
Sbjct: 69 LTXXARKXKDTDSEEEIREAFR 90
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF + +IR + FR D D +G +S E +L
Sbjct: 56 DADGNGTIDFPEFLTXXARKXKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVXTNL 112
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V I D D +G+V+++EF+Q
Sbjct: 113 GEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E ++ L QNP +Q I+ D D NG +DF EF
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF 69
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ ++ D E +++ AFR
Sbjct: 70 LTXXARKXKDTDSEEEIREAFR 91
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF + +IR + FR D D +G +S E +L
Sbjct: 57 DADGNGTIDFPEFLTXXARKXKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVXTNL 113
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V + I D D +G+V+++EF+Q
Sbjct: 114 GEKLTDEEVDQXIREADIDGDGQVNYEEFVQ 144
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 246 FRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEFIQGVSQF 301
F D D G ++ E + + L QNP +Q +I+ D D +G +DF EF+ +++
Sbjct: 316 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARK 375
Query: 302 SVKGDRESKLKFAFR 316
D E +++ AFR
Sbjct: 376 MKDTDSEEEIREAFR 390
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D DG I+F EF +++ +IR + FR D D +G +S E +L
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 412
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 413 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 217 INFQEFCSIVGNT---DIHKKMVVD-IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQN 271
I+F+E +I+G+ ++ ++ + I + F D D G ++ E + + L QN
Sbjct: 283 IDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 342
Query: 272 PL---VQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFR 316
P +Q +I+ D D +G +DF EF+ +++ D E +++ AFR
Sbjct: 343 PTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFR 390
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D DG I+F EF +++ + +IR + FR D D +G +S E +L
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKYTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 412
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 413 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 217 INFQEFCSIVGNT---DIHKKMVVD-IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQN 271
I+F+E +I+G+ ++ ++ + I + F D D G ++ E + + L QN
Sbjct: 283 IDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 342
Query: 272 PL---VQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFR 316
P +Q +I+ D D +G +DF EF+ +++ D E +++ AFR
Sbjct: 343 PTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFR 390
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D DG I+F EF +++ + +IR + FR D D +G +S E +L
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKYTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 412
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 413 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 254 SGALSIDEFMSLPELQQ-----NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308
SG L++ EF L+ N V+++ + FD +++G +DF E++ +S +KG +
Sbjct: 29 SGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALS-LVLKGKVD 87
Query: 309 SKLKFAFR 316
KL++ F+
Sbjct: 88 QKLRWYFK 95
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 212 DRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE---- 267
++DG I+F E+ V + K VD ++L F+ D+D +G + E +++ +
Sbjct: 64 NKDGYIDFMEY---VAALSLVLKGKVD-QKLRWYFKLYDVDGNGCIDRGELLNIIKAIRA 119
Query: 268 -------LQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300
+ V D D + +GE+ +EF++GV +
Sbjct: 120 INRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 246 FRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEFIQGVSQF 301
F D D G ++ E + + L QNP +Q +I+ D D +G +DF EF+ +++
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARK 376
Query: 302 SVKGDRESKLKFAFR 316
D E +++ AFR
Sbjct: 377 MKYTDSEEEIREAFR 391
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D DG I+F EF +++ + +IR + FR D D +G +S E +L
Sbjct: 357 DADGDGTIDFPEFLTMMARKMKYTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 413
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 414 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 246 FRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEFIQGVSQF 301
F D D G ++ E + + L QNP +Q +I+ D D +G +DF EF+ +++
Sbjct: 308 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARK 367
Query: 302 SVKGDRESKLKFAFR 316
D E +++ AFR
Sbjct: 368 MKDTDSEEEIREAFR 382
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D DG I+F EF ++ +IR + FR D D +G +S E +L
Sbjct: 348 DADGDGTIDFPEFLIMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNL 404
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF+Q
Sbjct: 405 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 435
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPL----VQRVIDIFDEDRNGEVDFKE 293
D + L + FR +D D SGA+S+ E + P ++++ ++D++ +GE+ F E
Sbjct: 25 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDE 84
Query: 294 F 294
F
Sbjct: 85 F 85
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 15/102 (14%)
Query: 210 NKDRDGKINFQEFCSI----VGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSL 265
+KD G I+F+EF ++ +G D ++++ K FR D DNSG ++I + +
Sbjct: 74 DKDGSGTIDFEEFLTMMTAKMGERDSREEIL-------KAFRLFDDDNSGTITIKDLRRV 126
Query: 266 P-ELQQN---PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSV 303
EL +N +Q +I D + + E+D EFI+ + + S+
Sbjct: 127 AKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D +G +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFR 90
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 210 NKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF--- 262
+ D DG I+F EF +++ +TD ++ IR + FR D D +G +S E
Sbjct: 56 DADGDGTIDFPEFLTMMARKMKDTDSEEE----IR---EAFRVFDKDGNGYISAAELRHV 108
Query: 263 -MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
+L E + V +I D D +G+V+++EF+Q
Sbjct: 109 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 246 FRKLDLDNSGALSIDEFMS-----LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300
F+ +D DNSG ++ DE EL ++ ++ ++D D D++G +D+ EFI
Sbjct: 16 FKMIDTDNSGTITFDELKDGLKRVGSELMESE-IKDLMDAADIDKSGTIDYGEFIAATVH 74
Query: 301 FSVKGDRESKLKFAF 315
+ K +RE L AF
Sbjct: 75 LN-KLEREENLVSAF 88
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 207 DDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF---- 262
D ++ D+ G I++ EF + +H + L F D D SG +++DE
Sbjct: 53 DAADIDKSGTIDYGEFIAAT----VHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQAC 108
Query: 263 --MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEF 294
L ++ + +++ + D+D +G++D+ EF
Sbjct: 109 KDFGLDDIHIDDMIKEI----DQDNDGQIDYGEF 138
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 255 GALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGE-VDFKEFIQGVSQFSVKGDRESKLKF 313
+ ++ +SLPEL+ NP +R+ +F + + F++F+ +S FS + K +
Sbjct: 43 AQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHY 102
Query: 314 AFR 316
AFR
Sbjct: 103 AFR 105
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 34.7 bits (78), Expect = 0.13, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 238 DIRRLGKRFRKLDLDNSGALSIDEFMSL-PELQQNPL-VQRVIDIFDEDRNGEVDFKEFI 295
++ RL F D + SG L +EF +L EL+ P + V D DR+G + F+EF
Sbjct: 25 ELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFA 84
Query: 296 QG 297
+G
Sbjct: 85 RG 86
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 265 LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAF 315
P+ + + FD D NG V F++FI+G+S ++G + KL +AF
Sbjct: 95 FPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLS-ILLRGTVQEKLNWAF 144
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 254 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308
SG L+ ++F+ + P + +FD+D NG + F+EFI +S S +G E
Sbjct: 40 SGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTS-RGTLE 98
Query: 309 SKLKFAF 315
KL +AF
Sbjct: 99 EKLSWAF 105
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 52/108 (48%), Gaps = 28/108 (25%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSL---- 265
+KD +G I+F+EF +++ T + ++ +L F DL++ G ++ DE +++
Sbjct: 73 DKDNNGFIHFEEFITVLSTT---SRGTLE-EKLSWAFELYDLNHDGYITFDEMLTIVASV 128
Query: 266 ----------------PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQG 297
PE++ V+++ + D++ +G + EF +G
Sbjct: 129 YKMMGSMVTLNEDEATPEMR----VKKIFKLMDKNEDGYITLDEFREG 172
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 246 FRKLDLDNSGALSIDEFMS-LPELQQNPLVQRVIDIF---DEDRNGEVDFKEFIQGVSQF 301
F D D G ++ E + + L QNP + D+ D D NG VDF EF+ +++
Sbjct: 16 FSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARK 75
Query: 302 SVKGDRESKLKFAFR 316
D E +++ AFR
Sbjct: 76 MKDTDNEEEIREAFR 90
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
++D +G ++F EF ++ +IR + FR D D +G +S E L
Sbjct: 56 DRDGNGTVDFPEFLGMMARKMKDTDNEEEIR---EAFRVFDKDGNGFVSAAELRHVMTRL 112
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I D D +G+V+++EF++
Sbjct: 113 GEKLSDEEVDEMIRAADTDGDGQVNYEEFVR 143
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 254 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308
SG ++ EF ++ PE Q V FD + +G +DFKE++ + S G
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSA-GKTN 98
Query: 309 SKLKFAF 315
KL++AF
Sbjct: 99 QKLEWAF 105
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 254 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308
SG ++ EF ++ PE Q V FD + +G +DFKE++ + S G
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSA-GKTN 98
Query: 309 SKLKFAF 315
KL++AF
Sbjct: 99 QKLEWAF 105
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 269 QQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFR 316
+++ RV D+FD NG + F+EF + +S F + K+ F+F+
Sbjct: 82 KESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQ 129
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 254 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308
SG ++ EF ++ PE Q V FD + +G +DFKE++ + S G
Sbjct: 41 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSA-GKTN 99
Query: 309 SKLKFAF 315
KL++AF
Sbjct: 100 QKLEWAF 106
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 254 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308
SG ++ EF ++ PE Q V FD + +G +DFKE++ + S G
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSA-GKTN 98
Query: 309 SKLKFAF 315
KL++AF
Sbjct: 99 QKLEWAF 105
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 255 GALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGE-VDFKEFIQGVSQFSVKGDRESKLKF 313
+ ++ +SLPEL+ NP +R+ +F + + F++F+ +S FS + K +
Sbjct: 74 AQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHY 133
Query: 314 AFR 316
AFR
Sbjct: 134 AFR 136
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 208 DSNKDRDGKINFQEFCSIV----GNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFM 263
D +KD G I+F+EF ++ G D ++++ K FR D D +G +S
Sbjct: 52 DIDKDGSGTIDFEEFLQMMTAKMGERDSREEIM-------KAFRLFDDDETGKISFKNLK 104
Query: 264 SLP-ELQQNPL---VQRVIDIFDEDRNGEVDFKEFIQ 296
+ EL +N +Q +ID D D +GEV+ +EF +
Sbjct: 105 RVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFR 141
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ + D E +L AF+
Sbjct: 69 LSLMARKMKEQDSEEELIEAFK 90
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ + D E +L AF+
Sbjct: 69 LSLMARKMKEQDSEEELIEAFK 90
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 208 DSNKDRDGKINFQEFCSIVG----NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF- 262
++ + +G++NF EFC I+ TD ++M + F+ D D G +S E
Sbjct: 54 EAENNNNGQLNFTEFCGIMAKQMRETDTEEEMR-------EAFKIFDRDGDGFISPAELR 106
Query: 263 ---MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300
++L E + + +I D D +G ++++EF+ +SQ
Sbjct: 107 FVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 269 QQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFR 316
+++ RV D+FD NG + F+EF + +S F + K+ F+F+
Sbjct: 51 KESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQ 98
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 246 FRKLDLDNSGALSIDEFMS-LPELQQNPLVQRVIDIFDE---DRNGEVDFKEFIQGVSQF 301
F D D G ++ + + + L QNP + D+ +E D NG +DF +F+ +++
Sbjct: 317 FSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMARK 376
Query: 302 SVKGDRESKLKFAFR 316
D E +++ AFR
Sbjct: 377 MKDTDSEEEIREAFR 391
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 246 FRKLDLDNSGALSIDEFMSL--PELQQNPLVQRVIDIF----DEDRNGEVDFKEFIQGVS 299
F+ D+D +G +S++E + + +NPL+ + ID D + +GE+DF EF+ +S
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194
Query: 300 Q 300
+
Sbjct: 195 K 195
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 237 VDIRRLGKRFRKLDLDNSGALS----IDEFMSLPELQQNPLVQRVIDIFDEDRNGEVDFK 292
V+I L F LD+DNSG LS +D + + P + +V+ D + +G++ +
Sbjct: 54 VEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYT 113
Query: 293 EFI 295
+F+
Sbjct: 114 DFL 116
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ +K D E +++ AFR
Sbjct: 69 LTMMAR-KMK-DSEEEIREAFR 88
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ +KM + + FR D D +G +S E +L
Sbjct: 56 DADGNGTIDFPEFLTMMA-----RKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL 110
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFI 295
E + V +I D D +G+V+++EF+
Sbjct: 111 GEKLTDEEVDEMIREADIDGDGQVNYEEFV 140
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKM-VVDIRRLGKRFRKLDLDNSGALSIDEFM-SLPE 267
N + G ++F +F ++G + + ++ ++ L FR+ D + G +S E ++ +
Sbjct: 57 NMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRK 116
Query: 268 LQQNPLVQRVID--IFDEDRNGE--VDFKEFIQGVSQ 300
L + + R I+ I D D NG+ VDF+EF++ +S+
Sbjct: 117 LLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To Sbi4211
Length = 89
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 265 LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFS 302
L E+++ +V +V++ D D +GE DF+EF+ V+ +
Sbjct: 45 LEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMIT 82
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 246 FRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDRNGEVDFKEF-IQGVSQ 300
F D D G +S E ++ L QNP + +I+ DED +G +DF+EF + V Q
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 301 F--SVKGDRESKLKFAFR 316
KG E +L+ FR
Sbjct: 86 MKEDAKGKSEEELEDCFR 103
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 265 LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFS 302
L E+++ +V +V++ D D +GE DF+EF+ V+ +
Sbjct: 45 LEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMIT 82
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 265 LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFS 302
L E+++ +V +V++ D D +GE DF+EF+ V+ +
Sbjct: 44 LEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMIT 81
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 265 LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFS 302
L E+++ +V +V++ D D +GE DF+EF+ V+ +
Sbjct: 45 LEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMIT 82
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase
Length = 91
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 265 LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFS 302
L E+++ +V +V++ D D +GE DF+EF+ V+ +
Sbjct: 44 LEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMIT 81
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 254 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308
SG ++ EF ++ PE Q V FD + +G +DFK+++ + S G
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSA-GKTN 98
Query: 309 SKLKFAF 315
KL++AF
Sbjct: 99 QKLEWAF 105
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 265 LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAF 315
P+ + + FD D NG + F++F+ G+S ++G KLK+AF
Sbjct: 122 FPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLS-ILLRGTVHEKLKWAF 171
>pdb|2H61|A Chain A, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|B Chain B, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|E Chain E, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|F Chain F, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|H Chain H, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3CZT|X Chain X, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 9
pdb|3D0Y|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
pdb|3D10|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3D10|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3HCM|A Chain A, Crystal Structure Of Human S100b In Complex With S45
pdb|3HCM|B Chain B, Crystal Structure Of Human S100b In Complex With S45
Length = 92
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 265 LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299
L E+++ +V +V++ D D +GE DF+EF+ V+
Sbjct: 45 LEEIKEQEVVDKVMETLDNDGDGECDFQEFMAFVA 79
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 32.7 bits (73), Expect = 0.43, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 238 DIRRLGKRFRKLDLDNSGALSIDEFMS-----LPELQQNPLVQRVIDIFDEDRNGEVDFK 292
+I L + F+ +D DNSG ++ DE EL ++ ++ ++D D D++G +D+
Sbjct: 21 EIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESE-IKDLMDAADIDKSGTIDYG 79
Query: 293 EFI 295
EFI
Sbjct: 80 EFI 82
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 254 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308
SG ++ EF ++ PE Q V FD + +G +DFK+++ + S G
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSA-GKTN 98
Query: 309 SKLKFAF 315
KL++AF
Sbjct: 99 QKLEWAF 105
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 265 LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299
L E+++ +V +V++ D D +GE DF+EF+ V+
Sbjct: 44 LEEIKEQEVVDKVMETLDNDGDGECDFQEFMAFVA 78
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
Length = 92
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 265 LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299
L E+++ +V +V++ D D +GE DF+EF+ V+
Sbjct: 45 LEEIKEQEVVDKVMETLDNDGDGECDFQEFMAFVA 79
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 246 FRKLDLDNSGALSIDEFMSLPE-LQQNPL---VQRVIDIFDEDRNGEVDFKEF-IQGVSQ 300
F D D G +S E ++ L QNP + +I+ DED +G +DF+EF + V Q
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 301 F--SVKGDRESKLKFAFR 316
KG E +L FR
Sbjct: 86 MKEDAKGKSEEELANCFR 103
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 5 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 64
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +++ D E +++ AFR
Sbjct: 65 LTMMARKMKDTDSE-EIREAFR 85
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G I+F EF +++ K D + + FR D D +G +S E +L
Sbjct: 52 DADGNGTIDFPEFLTMMA----RKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNL 107
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V +I + D +G+V+++EF+Q
Sbjct: 108 GEKLTDEEVDEMIREANIDGDGQVNYEEFVQ 138
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 246 FRKLDLDNSGALSIDEFMSLPE-LQQNPL---VQRVIDIFDEDRNGEVDFKEF-IQGVSQ 300
F D D G +S E ++ L QNP + +I+ DED +G +DF+EF + V Q
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 301 F--SVKGDRESKLKFAFR 316
KG E +L FR
Sbjct: 86 MKEDAKGKSEEELANCFR 103
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 32.7 bits (73), Expect = 0.51, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKM-VVDIRRLGKRFRKLDLDNSGALSIDEFM-SLPE 267
N + G ++F +F ++G + + ++ ++ L FR+ D + G +S E ++
Sbjct: 57 NMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRA 116
Query: 268 LQQNPLVQRVID--IFDEDRNGE--VDFKEFIQGVSQ 300
L + + R I+ I D D NG+ VDF+EF++ +S+
Sbjct: 117 LLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 246 FRKLDLDNSGALSIDEFMSLPE-LQQNPL---VQRVIDIFDEDRNGEVDFKEF-IQGVSQ 300
F D D G +S E ++ L QNP + +I+ DED +G +DF+EF + V Q
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 301 F--SVKGDRESKLKFAFR 316
KG E +L FR
Sbjct: 86 MKEDAKGKSEEELADCFR 103
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 246 FRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDRNGEVDFKEF-IQGVSQ 300
F D D G +S E ++ L QNP + +I+ DED +G +DF+EF + V Q
Sbjct: 23 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 301 F--SVKGDRESKLKFAFR 316
KG E +L FR
Sbjct: 83 MKEDAKGKSEEELANCFR 100
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 212 DRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPEL--Q 269
D G I+++EF + +H + L F D D SG ++ DE E
Sbjct: 75 DNSGTIDYKEFIAAT----LHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGV 130
Query: 270 QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKG 305
++ ++ + D+D +G +D+ EF+ + S+ G
Sbjct: 131 EDVRIEELXRDVDQDNDGRIDYNEFVAXXQKGSITG 166
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 238 DIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPLVQRVIDIF---DEDRNGEVDFKE 293
+I L + F +D D SG ++ +E + L + N ++D+ D D +G +D+KE
Sbjct: 25 EIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKE 84
Query: 294 FIQGVSQFSVKGDRESKLKFAF 315
FI + K +RE L AF
Sbjct: 85 FIAATLHLN-KIEREDHLFAAF 105
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 I 295
+
Sbjct: 69 L 69
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 I 295
+
Sbjct: 69 L 69
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 295 I 295
+
Sbjct: 70 L 70
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 I 295
+
Sbjct: 69 L 69
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 32.0 bits (71), Expect = 0.76, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 246 FRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIF----DEDRNGEVDFKEFIQGVSQ 300
FR D D G +++DE PL Q +D D D++G V+++EF + ++Q
Sbjct: 12 FRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E ++ L NP +Q I+ D D NG ++F EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ ++ D E +++ AFR
Sbjct: 69 LTXXARCXKDTDSEEEIREAFR 90
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF----MSL 265
+ D +G INF EF + +IR + FR D D +G +S E +L
Sbjct: 56 DADGNGTINFPEFLTXXARCXKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVXTNL 112
Query: 266 PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296
E + V I D D +G+V+++EF+Q
Sbjct: 113 GEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 I 295
+
Sbjct: 69 L 69
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 16/92 (17%)
Query: 212 DRDGK--INFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQ 269
DR+ K +NF EF + K + D + + FR D DNSG + +E
Sbjct: 54 DRENKAGVNFSEFTGVW-------KYITDWQNV---FRTYDRDNSGMIDKNELKQALSGA 103
Query: 270 QNPLVQRVIDI----FDEDRNGEVDFKEFIQG 297
L + DI FD G++ F +FIQG
Sbjct: 104 GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQG 135
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 231 IHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRN 286
+ ++ +VD + + F D D G ++++E + + L QNP +Q +I D D N
Sbjct: 4 LSEEQIVDFK---EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 287 GEVDFKEFI 295
G ++F EF+
Sbjct: 61 GTIEFDEFL 69
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSL 265
+KD DG I +E +++ + D + L ++D D +G + DEF+SL
Sbjct: 20 DKDGDGCITVEELATVIRSLDQNPTE----EELQDMISEVDADGNGTIEFDEFLSL 71
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 215 GKINFQEFCSIVGNTDIHKKM-VVDIRRLGKRFRKLDLDNSGALSIDEFM-SLPELQQNP 272
G ++F +F ++G + + ++ ++ L FR+ D + G +S E ++ +L +
Sbjct: 76 GHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQ 135
Query: 273 LVQRVID--IFDEDRNGE--VDFKEFIQGVSQ 300
+ R I+ I D D NG+ VDF+EF++ +S+
Sbjct: 136 VGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 I 295
+
Sbjct: 69 L 69
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 I 295
+
Sbjct: 69 L 69
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 246 FRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDRNGEVDFKEF-IQGVSQ 300
F D D G +S+ E ++ L Q P + +I+ DED +G +DF+EF + V Q
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 301 F--SVKGDRESKLKFAFR 316
KG E +L FR
Sbjct: 83 MKEDAKGKSEEELAECFR 100
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D NG +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 295 I 295
+
Sbjct: 69 L 69
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 231 IHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRN 286
+ ++ +VD + + F D D G ++++E + + L QNP +Q +I D D N
Sbjct: 4 LSEEQIVDFK---EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 287 GEVDFKEFI 295
G ++F EF+
Sbjct: 61 GTIEFDEFL 69
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSL 265
+KD DG I +E +++ + D + L ++D D +G + DEF+SL
Sbjct: 20 DKDGDGCITVEELATVIRSLDQNPTE----EELQDMISEVDADGNGTIEFDEFLSL 71
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I F D D G +S E ++ L QNP + +I+ DED +G +DF+EF
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 295 I 295
+
Sbjct: 79 L 79
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Query: 254 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308
+G ++ +F S+ P+ Q V FD + +G +DFKE++ + + G
Sbjct: 48 TGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHX-TTAGKTN 106
Query: 309 SKLKFAFRXXXXXXXXXXXQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGL 364
KL++AF + E++ A+ + +T +L D RA +
Sbjct: 107 QKLEWAFSLYDVDGNGTISKNEVLEIVXAIFKXITPEDVKLLPDDENTPEKRAEKI 162
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPLVQRVIDIFDE---DRNGEVDFKEF 294
I + F D DNSG++S E + + L +P V D+ +E D N ++F EF
Sbjct: 10 IAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEF 69
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +S+ D E +L AF+
Sbjct: 70 LALMSRQLKCNDSEQELLEAFK 91
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 22/94 (23%)
Query: 212 DRDGK--INFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEF------M 263
DR+ K +NF EF + K + D + + FR D DNSG + +E
Sbjct: 51 DRENKAGVNFSEFTGVW-------KYITDWQNV---FRTYDRDNSGMIDKNELKQALSGY 100
Query: 264 SLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQG 297
L + + L+++ FD G++ F +FIQG
Sbjct: 101 RLSDQFHDILIRK----FDRQGRGQIAFDDFIQG 130
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 16/92 (17%)
Query: 212 DRDGK--INFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQ 269
DR+ K +NF EF + K + D + + FR D DNSG + +E
Sbjct: 72 DRENKAGVNFSEFTGVW-------KYITDWQNV---FRTYDRDNSGMIDKNELKQALSGF 121
Query: 270 QNPLVQRVIDI----FDEDRNGEVDFKEFIQG 297
L + DI FD G++ F +FIQG
Sbjct: 122 GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQG 153
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 274 VQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFR 316
+Q +I+ D D NG +DF EF+ +++ D E +++ AFR
Sbjct: 3 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 45
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 246 FRKLDLDNSGALSIDE---FMSLPELQQNP-LVQRVIDIFDEDRNGEVDFKEF 294
F+++D++ GA+S +E F+S +N L+Q + D D NGE+D EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 246 FRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDRNGEVDFKEF-IQGVSQ 300
F D D G +S+ E ++ L Q P + +I+ DED +G +DF+EF + V Q
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 301 F--SVKGDRESKLKFAFR 316
KG E +L FR
Sbjct: 83 MKEDAKGKSEEELAELFR 100
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 16/92 (17%)
Query: 212 DRDGK--INFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQ 269
DR+ K +NF EF + K + D + + FR D DNSG + +E
Sbjct: 73 DRENKAGVNFSEFTGVW-------KYITDWQNV---FRTYDRDNSGMIDKNELKQALSGF 122
Query: 270 QNPLVQRVIDI----FDEDRNGEVDFKEFIQG 297
L + DI FD G++ F +FIQG
Sbjct: 123 GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQG 154
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 25/38 (65%)
Query: 265 LPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFS 302
L E+++ +V +V++ D + +GE DF+EF+ V+ +
Sbjct: 45 LEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMIT 82
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 16/92 (17%)
Query: 212 DRDGK--INFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQ 269
DR+ K +NF EF + K + D + + FR D DNSG + +E
Sbjct: 54 DRENKAGVNFSEFTGV-------WKYITDWQNV---FRTYDRDNSGMIDKNELKQALSGF 103
Query: 270 QNPLVQRVIDI----FDEDRNGEVDFKEFIQG 297
L + DI FD G++ F +FIQG
Sbjct: 104 GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQG 135
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 246 FRKLDLDNSGALSIDE---FMSLPELQQNP-LVQRVIDIFDEDRNGEVDFKEF 294
F+++D++ GA+S +E F+S +N L+Q + D D NGE+D EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 246 FRKLDLDNSGALSIDE---FMSLPELQQNP-LVQRVIDIFDEDRNGEVDFKEF 294
F+++D++ GA+S +E F+S +N L+Q + D D NGE+D EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 30.8 bits (68), Expect = 1.9, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 246 FRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDRNGEVDFKEFI 295
F D D G +S E ++ L QNP + +I+ DED +G +DF+EF+
Sbjct: 15 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 68
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 16/92 (17%)
Query: 212 DRDGK--INFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQ 269
DR+ K +NF EF + K + D + + FR D DNSG + +E
Sbjct: 50 DRENKAGVNFSEFTGVW-------KYITDWQNV---FRTYDRDNSGMIDKNELKQALSGF 99
Query: 270 QNPLVQRVIDI----FDEDRNGEVDFKEFIQG 297
L + DI FD G++ F +FIQG
Sbjct: 100 GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQG 131
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 16/92 (17%)
Query: 212 DRDGK--INFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQ 269
DR+ K +NF EF + K + D + + FR D DNSG + +E
Sbjct: 51 DRENKAGVNFSEFTGVW-------KYITDWQNV---FRTYDRDNSGMIDKNELKQALSGF 100
Query: 270 QNPLVQRVIDI----FDEDRNGEVDFKEFIQG 297
L + DI FD G++ F +FIQG
Sbjct: 101 GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQG 132
>pdb|2Y5I|A Chain A, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|B Chain B, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|C Chain C, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|D Chain D, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|E Chain E, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|F Chain F, S100z From Zebrafish In Complex With Calcium
Length = 99
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 269 QQNP-LVQRVIDIFDEDRNGEVDFKEFIQGVSQFSV 303
Q++P LV+++++ D +++ EVDF EF+ V+ +V
Sbjct: 49 QKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAALTV 84
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-EL 268
+K+ GK+NF +F +++ K +I K F+ D D +G +S + EL
Sbjct: 52 DKEGTGKMNFGDFLTVMTQKMSEKDTKEEIL---KAFKLFDDDETGKISFKNLKRVAKEL 108
Query: 269 QQN---PLVQRVIDIFDEDRNGEVDFKEFIQ 296
+N +Q +ID D D +GEV +EF++
Sbjct: 109 GENLTDEELQEMIDEADRDGDGEVSEQEFLR 139
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2HPK|A Chain A, Crystal Structure Of Photoprotein Berovin From Beroe
Abyssicola
Length = 208
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 9/52 (17%)
Query: 222 FCSIVGNT------DIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE 267
+ VGN D+H K + RL KRF DLD+ G DE + P+
Sbjct: 15 YLRSVGNQWQFNVEDLHPKX---LSRLYKRFDTFDLDSDGKXEXDEVLYWPD 63
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPLVQRVIDIFDE---DRNGEVDFKEF 294
I + F D DN+G++S E + + L +P V D+ +E D N +++F EF
Sbjct: 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +S+ D E +L AF+
Sbjct: 69 LALMSRQLKSNDSEQELLEAFK 90
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 274 VQRVIDIFDEDRNGEVDFKEFIQGVSQFSV 303
V +V+ DED +GEVDF+E++ V+ +V
Sbjct: 54 VDKVMKELDEDGDGEVDFQEYVVLVAALTV 83
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 176 LNQLMSMAKEMVEXXXXXXXXXXXRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKM 235
+N +AK ++ GE D +KD G I+ E+ + G + I
Sbjct: 92 VNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWKTYGGISGI---- 147
Query: 236 VVDIRRLGKRFRKLDLDNSGALSIDE 261
K F+ DLDNSG L +DE
Sbjct: 148 CPSDEDAEKTFKHCDLDNSGKLDVDE 173
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q +ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDRNGEVDFKEF 294
I + F D D G ++ E + + L QNP +Q +I+ D D +G +DF EF
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 68
Query: 295 I 295
+
Sbjct: 69 L 69
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 210 NKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-EL 268
+K+ GK NF +F ++ K +I K F+ D D +G +S + EL
Sbjct: 77 DKEGTGKXNFGDFLTVXTQKXSEKDTKEEIL---KAFKLFDDDETGKISFKNLKRVAKEL 133
Query: 269 QQN---PLVQRVIDIFDEDRNGEVDFKEFIQ 296
+N +Q ID D D +GEV +EF++
Sbjct: 134 GENLTDEELQEXIDEADRDGDGEVSEQEFLR 164
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPLVQRVIDIFDE---DRNGEVDFKEF 294
I + F D DN+G++S E + + L +P V D+ +E D N +++F EF
Sbjct: 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
Query: 295 IQGVSQFSVKGDRESKLKFAFR 316
+ +S+ D E +L AF+
Sbjct: 69 LALMSRQLKSNDSEQELLEAFK 90
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 227 GNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPLVQRVIDIFDE-- 283
G++++ ++ + + + + F D DN+G++S E + + L +P V D+ +E
Sbjct: 1 GSSNLTEEQIAEFK---EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEID 57
Query: 284 -DRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFR 316
D N +++F EF+ +S+ D E +L AF+
Sbjct: 58 VDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFK 91
>pdb|1W7P|D Chain D, The Crystal Structure Of Endosomal Complex Escrt-Ii
(Vps22VPS25VPS36)
Length = 566
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 15 ESPVLKHSNVRLYDGENKS-QFQRGELILTSHRLFWQKDITLC---LALSYIQNAVEEAK 70
E + +V LY G++K Q QRG + LTS R+ + D L L A
Sbjct: 21 EKDIFIDQSVGLYHGKSKILQRQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYS 80
Query: 71 SMFNLTAGRKIILYLSKAVPGKNLGPSATSA 101
S F LT ++IL+ LG SA +A
Sbjct: 81 SGF-LTRSPRLILFFKDPSSKDELGKSAETA 110
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 261 EFMSLPELQQNP-LVQRVIDIFDEDRNGEVDFKEFIQGVSQFSV 303
E S ++Q++ V +++ DE+ +GEVDF+EF+ V+ +V
Sbjct: 40 ELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTV 83
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFM-SLPELQQNPL--VQRVIDIFDEDRNGEVDF 291
M D+ R+ KRF D + G +S+ E +L L VQR++ D D +G +DF
Sbjct: 1 MADDMERIFKRF---DTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDF 57
Query: 292 KEFIQ 296
EFI
Sbjct: 58 NEFIS 62
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 29.6 bits (65), Expect = 4.3, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 238 DIRRLGKRFRKLDLDNSGALSIDEF----MSLPELQQNPLVQRVIDIFDEDRNGEVDFKE 293
++ + + F+ D D +G +S E SL + ++ +I D D +G+VDF+E
Sbjct: 34 ELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEE 93
Query: 294 FI 295
F+
Sbjct: 94 FV 95
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 246 FRKLDLDNSGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300
F K D + G LS+DEF + P Q +V+ +I D D NGE++ EF + +
Sbjct: 7 FEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEI-DVDGNGELNADEFTSCIEK 65
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 268 LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
L QNP +Q ID DED +G VDF EF+
Sbjct: 48 LGQNPTPEELQEXIDEVDEDGSGTVDFDEFL 78
>pdb|2CAY|A Chain A, Vps36 N-Terminal Ph Domain
pdb|2CAY|B Chain B, Vps36 N-Terminal Ph Domain
Length = 145
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 15/105 (14%)
Query: 11 LSPDESPVLKHSNVRLYDGENKS-QFQRGELILTSHRLFWQKDITLC---LALSYIQNAV 66
L E + +V LY G++K Q QRG + LTS R+ + D L L A
Sbjct: 25 LREGEKDIFIDQSVGLYHGKSKILQRQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAY 84
Query: 67 EEAKSMFNLTAGRKIILYLSKAVPGKNLGPSATSAYDYVKLSFRE 111
S F LT ++IL+ PS+++ ++V+LSFR+
Sbjct: 85 VNYSSGF-LTRSPRLILFFKD--------PSSST--EFVQLSFRK 118
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 28.9 bits (63), Expect = 6.1, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 246 FRKLDLDNSGALSIDEFMSLPE-LQQNPL---VQRVIDIFDEDRNGEVDFKEFI 295
F D D G +S E ++ L QNP + +I DED +G +DF+EF+
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFL 79
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 244 KRFRKLDLDNSGALSIDEF----MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGV 298
K F+ D +++G +S+ + L E + V ++ + D NGE+D+K+FI+ V
Sbjct: 87 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDV 145
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 239 IRRLGKRFRKLDLDNSGALSIDEF----MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEF 294
I+ L + FR+LD D S +L DEF L + + V +D + +G +D +EF
Sbjct: 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 295 IQGV 298
++ +
Sbjct: 96 LRAL 99
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 244 KRFRKLDLDNSGALSIDEF----MSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGV 298
K F+ D +++G +S+ + L E + V ++ + D NGE+D+K+FI+ V
Sbjct: 9 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDV 67
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 238 DIRRLGKRFRKLDLDNSGALSIDEFM-SLPELQQNPL--VQRVIDIFDEDRNGEVDFKEF 294
D+ R+ KRF D + G +S+ E +L L VQR++ D D +G +DF EF
Sbjct: 3 DMERIFKRF---DTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEF 59
Query: 295 IQ 296
I
Sbjct: 60 IS 61
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,261,179
Number of Sequences: 62578
Number of extensions: 466838
Number of successful extensions: 1734
Number of sequences better than 100.0: 222
Number of HSP's better than 100.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 1309
Number of HSP's gapped (non-prelim): 510
length of query: 473
length of database: 14,973,337
effective HSP length: 102
effective length of query: 371
effective length of database: 8,590,381
effective search space: 3187031351
effective search space used: 3187031351
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)