Query psy4132
Match_columns 473
No_of_seqs 526 out of 2806
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 17:45:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4132.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4132hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w7p_D VPS36P, YLR417W; ESCRT- 100.0 1.7E-60 5.9E-65 491.2 12.2 372 1-470 1-563 (566)
2 2hth_B Vacuolar protein sortin 100.0 3.7E-41 1.3E-45 290.0 11.0 131 1-134 3-137 (140)
3 2cay_A VPS36 PH domain, vacuol 100.0 5.7E-31 1.9E-35 227.1 7.2 120 1-133 9-140 (145)
4 3cuq_B Vacuolar protein-sortin 100.0 3.3E-28 1.1E-32 225.1 14.8 148 323-471 70-217 (218)
5 1u5t_B Defective in vacuolar p 99.9 1E-22 3.4E-27 180.6 9.5 145 324-470 10-168 (169)
6 2f33_A Calbindin; EF-hand, Ca2 99.8 5.7E-20 2E-24 175.7 13.1 211 164-397 13-259 (263)
7 2be4_A Hypothetical protein LO 99.8 3.8E-19 1.3E-23 170.8 11.9 211 165-398 9-268 (272)
8 1ij5_A Plasmodial specific LAV 99.8 1.9E-19 6.5E-24 178.4 6.0 188 163-397 118-317 (323)
9 2lmt_A Calmodulin-related prot 99.7 5.2E-18 1.8E-22 148.5 11.9 138 234-396 4-145 (148)
10 3ll8_B Calcineurin subunit B t 99.7 2.8E-17 9.5E-22 143.8 15.4 141 236-400 2-146 (155)
11 2obh_A Centrin-2; DNA repair c 99.7 8.9E-18 3E-22 145.9 10.8 136 236-396 2-141 (143)
12 3u0k_A Rcamp; fluorescent prot 99.7 2.9E-17 1E-21 164.1 13.4 139 233-396 295-437 (440)
13 2lhi_A Calmodulin, serine/thre 99.7 1.4E-17 4.8E-22 150.4 10.0 138 234-397 5-146 (176)
14 1exr_A Calmodulin; high resolu 99.7 9.6E-17 3.3E-21 139.9 12.1 137 235-396 5-145 (148)
15 2bec_A Calcineurin B homologou 99.7 2.5E-16 8.4E-21 144.8 14.7 140 234-397 23-182 (202)
16 2ct9_A Calcium-binding protein 99.7 3.6E-16 1.2E-20 144.6 14.7 155 217-398 9-182 (208)
17 2bl0_C Myosin regulatory light 99.7 2.9E-16 9.8E-21 135.4 13.0 136 236-397 2-141 (142)
18 3i5g_B Myosin regulatory light 99.7 7.5E-17 2.6E-21 142.2 9.0 137 233-396 9-146 (153)
19 3qrx_A Centrin; calcium-bindin 99.7 3.2E-16 1.1E-20 139.3 12.2 139 234-397 22-164 (169)
20 2znd_A Programmed cell death p 99.7 1.5E-16 5.2E-21 142.3 10.0 154 165-340 5-170 (172)
21 2ehb_A Calcineurin B-like prot 99.7 6.2E-16 2.1E-20 142.6 14.4 163 211-397 11-182 (207)
22 3fwb_A Cell division control p 99.7 6.7E-16 2.3E-20 135.8 13.6 138 234-396 17-158 (161)
23 2jnf_A Troponin C; stretch act 99.7 5.5E-16 1.9E-20 136.2 12.1 139 234-397 7-154 (158)
24 3i5g_C Myosin catalytic light 99.7 3E-16 1E-20 139.3 10.3 139 234-397 3-150 (159)
25 3i5g_C Myosin catalytic light 99.7 5.4E-16 1.9E-20 137.6 11.8 134 162-301 4-152 (159)
26 4ds7_A Calmodulin, CAM; protei 99.7 7.1E-16 2.4E-20 133.4 12.2 137 234-396 5-145 (147)
27 3j04_B Myosin regulatory light 99.7 6E-16 2.1E-20 133.5 11.6 136 236-397 3-139 (143)
28 3ox6_A Calcium-binding protein 99.6 1.4E-15 4.8E-20 132.3 13.5 139 234-396 5-151 (153)
29 1qxp_A MU-like calpain; M-calp 99.6 6.7E-17 2.3E-21 181.1 6.0 208 166-396 533-800 (900)
30 3sjs_A URE3-BP sequence specif 99.6 2E-15 7E-20 141.1 14.9 133 234-399 45-181 (220)
31 1dtl_A Cardiac troponin C; hel 99.6 8E-16 2.7E-20 135.4 11.4 139 234-397 12-158 (161)
32 3k21_A PFCDPK3, calcium-depend 99.6 2E-15 7E-20 137.8 14.5 138 235-397 47-190 (191)
33 2lhi_A Calmodulin, serine/thre 99.6 4.5E-16 1.5E-20 140.5 9.5 130 164-301 8-148 (176)
34 2f33_A Calbindin; EF-hand, Ca2 99.6 6.1E-16 2.1E-20 147.5 10.8 197 235-433 11-259 (263)
35 1alv_A Calpain, S-camld; calci 99.6 1.6E-15 5.5E-20 135.8 12.5 149 166-337 3-169 (173)
36 2f2o_A Calmodulin fused with c 99.6 1.4E-15 4.9E-20 136.5 12.0 140 235-399 6-149 (179)
37 1y1x_A Leishmania major homolo 99.6 1.1E-15 3.6E-20 139.5 11.2 151 167-339 27-188 (191)
38 3cuq_A Vacuolar-sorting protei 99.6 1.4E-15 4.9E-20 140.1 11.5 146 324-471 70-219 (234)
39 3sjs_A URE3-BP sequence specif 99.6 1.2E-15 4.2E-20 142.6 11.2 156 163-340 47-217 (220)
40 1nya_A Calerythrin; EF-hand, m 99.6 4.7E-15 1.6E-19 132.3 14.2 138 236-400 3-166 (176)
41 2znd_A Programmed cell death p 99.6 4.2E-15 1.4E-19 132.8 13.8 150 237-426 4-160 (172)
42 2mys_C Myosin; muscle protein, 99.6 5.1E-15 1.8E-19 128.2 13.7 136 235-397 3-147 (149)
43 1top_A Troponin C; contractIle 99.6 1.7E-15 5.8E-20 133.4 10.5 139 234-397 14-159 (162)
44 1dgu_A Calcium-saturated CIB; 99.6 3.6E-15 1.2E-19 134.7 12.8 144 234-397 14-170 (183)
45 1qv0_A Obelin, OBL; photoprote 99.6 4.2E-15 1.4E-19 135.2 13.2 138 235-397 15-176 (195)
46 1m45_A MLC1P, myosin light cha 99.6 2.5E-16 8.6E-21 136.8 4.8 131 241-396 5-145 (148)
47 1qxp_A MU-like calpain; M-calp 99.6 9.7E-16 3.3E-20 171.7 10.8 143 167-331 607-826 (900)
48 2obh_A Centrin-2; DNA repair c 99.6 2.7E-15 9.3E-20 130.1 11.0 129 164-299 3-142 (143)
49 3sg6_A Gcamp2, myosin light ch 99.6 1.5E-15 5E-20 155.2 10.7 164 205-397 281-448 (450)
50 2lmt_A Calmodulin-related prot 99.6 1.6E-15 5.4E-20 132.5 9.5 131 163-300 6-147 (148)
51 1wdc_C Scallop myosin; calcium 99.6 1.8E-15 6E-20 132.7 9.5 137 235-397 4-149 (156)
52 2l4h_A Calcium and integrin-bi 99.6 3.8E-15 1.3E-19 138.7 12.1 144 234-397 45-201 (214)
53 2i7a_A Calpain 13; calcium-dep 99.6 2.5E-15 8.6E-20 135.3 10.5 123 179-324 23-159 (174)
54 1uhk_A Aequorin 2, aequorin; E 99.6 5.2E-15 1.8E-19 134.0 12.5 138 235-397 11-172 (191)
55 3pm8_A PFCDPK2, calcium-depend 99.6 1E-15 3.5E-20 140.5 7.8 139 235-397 52-194 (197)
56 2d8n_A Recoverin; structural g 99.6 3.1E-15 1.1E-19 137.9 10.9 167 209-397 8-184 (207)
57 2mys_B Myosin; muscle protein, 99.6 5.6E-15 1.9E-19 131.0 12.1 134 235-397 20-158 (166)
58 3mse_B Calcium-dependent prote 99.6 5.6E-15 1.9E-19 133.3 12.2 133 236-397 35-177 (180)
59 2ovk_C Myosin catalytic light 99.6 2.4E-15 8.1E-20 132.4 9.5 138 235-398 4-151 (159)
60 2hpk_A Photoprotein berovin; s 99.6 3.2E-15 1.1E-19 138.0 10.3 135 236-397 32-189 (208)
61 2be4_A Hypothetical protein LO 99.6 1.1E-15 3.9E-20 146.4 7.5 198 237-434 8-268 (272)
62 1wdc_B Scallop myosin; calcium 99.6 6.2E-15 2.1E-19 129.3 11.2 137 234-397 12-149 (156)
63 2ccm_A Calexcitin; EF hand, ca 99.6 9.9E-15 3.4E-19 132.5 12.7 137 235-398 7-171 (191)
64 1k94_A Grancalcin; penta-EF-ha 99.6 1.1E-14 3.9E-19 129.1 12.7 142 172-337 4-161 (165)
65 2zfd_A Calcineurin B-like prot 99.6 1.9E-14 6.5E-19 134.8 14.4 143 234-397 42-193 (226)
66 3khe_A Calmodulin-like domain 99.6 4.8E-15 1.6E-19 134.4 9.7 135 235-397 35-184 (191)
67 1gjy_A Sorcin, CP-22, V19; cal 99.6 1.3E-14 4.4E-19 129.1 12.1 142 172-337 6-163 (167)
68 1y1x_A Leishmania major homolo 99.6 3.4E-14 1.2E-18 129.4 15.2 108 209-323 36-143 (191)
69 2bl0_B Myosin regulatory light 99.6 4.7E-15 1.6E-19 128.0 8.8 128 242-397 7-139 (145)
70 3akb_A Putative calcium bindin 99.6 1.4E-14 4.7E-19 127.8 12.0 133 238-397 2-159 (166)
71 2ovk_B RLC, myosin regulatory 99.6 7.8E-15 2.7E-19 128.2 10.2 135 233-397 9-147 (153)
72 3u0k_A Rcamp; fluorescent prot 99.6 5.2E-15 1.8E-19 148.0 10.1 133 160-299 295-438 (440)
73 3dtp_E RLC, myosin regulatory 99.6 1.1E-14 3.9E-19 133.3 11.4 134 234-397 51-188 (196)
74 3e3r_A Calcyphosin, calcyphosi 99.6 5.6E-15 1.9E-19 135.5 9.3 155 236-409 33-192 (204)
75 2l2e_A Calcium-binding protein 99.6 1.5E-14 5.1E-19 131.2 11.7 165 213-397 4-174 (190)
76 1juo_A Sorcin; calcium-binding 99.6 1.6E-14 5.5E-19 132.3 12.0 146 167-337 33-194 (198)
77 1jba_A GCAP-2, protein (guanyl 99.6 2.7E-14 9.2E-19 131.3 13.5 154 235-397 17-175 (204)
78 1w7j_B Myosin light chain 1; m 99.6 1.3E-15 4.4E-20 132.7 4.3 137 235-397 5-149 (151)
79 1ggw_A Protein (CDC4P); light 99.6 1.3E-14 4.4E-19 124.7 10.1 131 239-396 4-137 (140)
80 2aao_A CDPK, calcium-dependent 99.5 9.6E-15 3.3E-19 129.2 9.0 135 235-397 22-160 (166)
81 1s6i_A CDPK, calcium-dependent 99.5 2.3E-15 7.9E-20 137.1 4.9 135 236-398 6-144 (188)
82 2sas_A Sarcoplasmic calcium-bi 99.5 1.2E-14 4.2E-19 130.6 9.6 135 236-397 4-166 (185)
83 1q80_A SCP, sarcoplasmic calci 99.5 1.2E-14 4.1E-19 129.5 9.1 133 236-397 2-155 (174)
84 1alv_A Calpain, S-camld; calci 99.5 4E-14 1.4E-18 126.6 12.4 150 238-430 2-165 (173)
85 1exr_A Calmodulin; high resolu 99.5 4.3E-14 1.5E-18 123.0 11.6 129 164-299 7-146 (148)
86 3cs1_A Flagellar calcium-bindi 99.5 2.9E-15 9.8E-20 139.8 4.0 160 209-397 21-194 (219)
87 3i5g_B Myosin regulatory light 99.5 9.9E-15 3.4E-19 128.5 7.1 129 161-301 10-149 (153)
88 1juo_A Sorcin; calcium-binding 99.5 2E-14 6.9E-19 131.6 8.7 128 237-399 30-166 (198)
89 1gjy_A Sorcin, CP-22, V19; cal 99.5 7.4E-14 2.5E-18 124.1 12.1 79 244-329 5-92 (167)
90 1bjf_A Neurocalcin delta; calc 99.5 6.9E-14 2.4E-18 127.0 11.4 161 215-397 6-174 (193)
91 3q5i_A Protein kinase; CDPK, m 99.5 2.8E-14 9.4E-19 149.9 9.8 135 235-397 350-496 (504)
92 1g8i_A Frequenin, neuronal cal 99.5 5.6E-14 1.9E-18 127.3 10.4 163 215-397 6-174 (190)
93 1k94_A Grancalcin; penta-EF-ha 99.5 6.7E-14 2.3E-18 124.0 10.6 81 244-331 3-92 (165)
94 1fpw_A Yeast frequenin, calciu 99.5 7.8E-14 2.7E-18 126.3 11.3 164 214-397 5-174 (190)
95 3lij_A Calcium/calmodulin depe 99.5 3.2E-14 1.1E-18 148.9 9.9 135 235-397 341-487 (494)
96 2r2i_A Guanylyl cyclase-activa 99.5 7.3E-14 2.5E-18 127.7 10.5 140 238-397 12-158 (198)
97 3pm8_A PFCDPK2, calcium-depend 99.5 7E-14 2.4E-18 128.2 9.9 132 161-300 51-195 (197)
98 1s6c_A KV4 potassium channel-i 99.5 7.2E-14 2.5E-18 125.8 9.5 144 240-397 18-167 (183)
99 3nyv_A Calmodulin-domain prote 99.5 6.2E-14 2.1E-18 146.3 10.2 135 235-397 330-479 (484)
100 2ggz_A Guanylyl cyclase-activa 99.5 6.5E-14 2.2E-18 129.7 9.2 139 238-397 17-162 (211)
101 1ij5_A Plasmodial specific LAV 99.5 6.9E-14 2.4E-18 138.4 9.9 182 234-432 116-316 (323)
102 2lvv_A Flagellar calcium-bindi 99.5 1.6E-14 5.6E-19 135.4 4.9 140 233-397 44-197 (226)
103 3e3r_A Calcyphosin, calcyphosi 99.5 1.3E-13 4.3E-18 126.4 10.4 132 163-302 33-183 (204)
104 2qac_A Myosin A tail domain in 99.5 1.1E-13 3.7E-18 119.9 8.9 129 237-396 11-144 (146)
105 1u5t_A Appears to BE functiona 99.5 1.3E-13 4.4E-18 127.2 9.3 141 324-471 89-232 (233)
106 3mwu_A Calmodulin-domain prote 99.5 5.5E-14 1.9E-18 146.9 7.7 137 235-397 326-480 (486)
107 3ox6_A Calcium-binding protein 99.5 2.1E-13 7.1E-18 118.4 10.1 133 163-299 7-152 (153)
108 1s1e_A KV channel interacting 99.5 1.5E-13 5.2E-18 128.7 9.9 163 215-397 32-200 (224)
109 3dd4_A KV channel-interacting 99.5 2E-13 6.9E-18 128.2 10.7 146 236-397 63-213 (229)
110 2ovk_C Myosin catalytic light 99.5 4.3E-13 1.5E-17 117.8 11.9 133 163-301 5-152 (159)
111 3a8r_A Putative uncharacterize 99.4 2.6E-13 8.8E-18 122.6 10.5 140 238-398 26-170 (179)
112 2i7a_A Calpain 13; calcium-dep 99.4 5.1E-13 1.7E-17 120.1 12.2 153 209-396 13-171 (174)
113 3bow_A Calpain-2 catalytic sub 99.4 2.2E-13 7.5E-18 148.5 11.7 153 166-340 531-701 (714)
114 3qrx_A Centrin; calcium-bindin 99.4 3.4E-13 1.2E-17 119.5 10.8 130 164-300 25-165 (169)
115 3k21_A PFCDPK3, calcium-depend 99.4 5.4E-13 1.9E-17 121.5 11.9 128 162-299 47-190 (191)
116 3fwb_A Cell division control p 99.4 3.6E-13 1.2E-17 118.1 10.0 130 163-299 19-159 (161)
117 1jfj_A Ehcabp, calcium-binding 99.4 1.7E-13 6E-18 115.9 7.7 126 242-396 2-133 (134)
118 1top_A Troponin C; contractIle 99.4 9E-13 3.1E-17 115.7 11.6 137 161-301 14-161 (162)
119 1dtl_A Cardiac troponin C; hel 99.4 6.4E-13 2.2E-17 116.6 10.5 135 163-301 14-160 (161)
120 1bjf_A Neurocalcin delta; calc 99.4 2.8E-13 9.5E-18 122.9 8.2 148 163-325 21-192 (193)
121 2f2o_A Calmodulin fused with c 99.4 4.6E-13 1.6E-17 120.0 9.2 131 164-301 8-149 (179)
122 2bl0_C Myosin regulatory light 99.4 2.3E-13 7.8E-18 117.0 6.8 126 165-298 4-140 (142)
123 3khe_A Calmodulin-like domain 99.4 1.1E-12 3.9E-17 118.5 11.5 131 163-301 36-186 (191)
124 4ds7_A Calmodulin, CAM; protei 99.4 8E-13 2.8E-17 113.9 9.9 129 163-299 7-146 (147)
125 1wdc_C Scallop myosin; calcium 99.4 1.2E-12 4E-17 114.5 11.0 132 163-301 5-151 (156)
126 1m45_A MLC1P, myosin light cha 99.4 1.8E-13 6.1E-18 118.6 5.6 128 168-299 5-146 (148)
127 2hpk_A Photoprotein berovin; s 99.4 7.1E-13 2.4E-17 122.1 9.8 134 165-302 34-192 (208)
128 2ccm_A Calexcitin; EF hand, ca 99.4 1.1E-12 3.8E-17 118.8 10.5 136 164-301 9-172 (191)
129 3j04_B Myosin regulatory light 99.4 5.3E-13 1.8E-17 114.8 7.7 126 164-300 4-140 (143)
130 2jnf_A Troponin C; stretch act 99.4 3.8E-13 1.3E-17 117.9 6.7 134 163-300 9-155 (158)
131 2hps_A Coelenterazine-binding 99.4 2.2E-13 7.4E-18 122.9 4.8 137 235-398 9-166 (186)
132 2jul_A Calsenilin; EF-hand, ca 99.4 1.4E-12 4.9E-17 124.5 10.7 145 239-397 90-240 (256)
133 1s6c_A KV4 potassium channel-i 99.4 2.1E-12 7.1E-17 116.2 11.0 126 167-300 21-168 (183)
134 3dd4_A KV channel-interacting 99.4 5.5E-12 1.9E-16 118.4 14.0 140 166-320 66-227 (229)
135 2mys_C Myosin; muscle protein, 99.4 2.1E-12 7.3E-17 111.5 10.4 130 163-299 4-147 (149)
136 1jfj_A Ehcabp, calcium-binding 99.4 2.1E-12 7.1E-17 109.2 9.8 111 209-328 9-126 (134)
137 2aao_A CDPK, calcium-dependent 99.4 1.9E-12 6.5E-17 114.3 9.6 130 163-300 23-161 (166)
138 1w7j_B Myosin light chain 1; m 99.4 3.7E-13 1.3E-17 117.0 4.8 130 164-299 7-149 (151)
139 2d8n_A Recoverin; structural g 99.4 1.8E-12 6.1E-17 119.2 9.6 163 248-435 7-186 (207)
140 2mys_B Myosin; muscle protein, 99.4 2.4E-12 8.4E-17 113.8 10.1 130 161-301 19-160 (166)
141 2bl0_B Myosin regulatory light 99.4 2.1E-12 7.1E-17 111.1 9.3 123 169-300 7-140 (145)
142 3mse_B Calcium-dependent prote 99.3 4.6E-12 1.6E-16 114.0 11.5 127 163-300 35-178 (180)
143 1q80_A SCP, sarcoplasmic calci 99.3 1.1E-11 3.7E-16 110.2 13.0 132 164-301 3-157 (174)
144 1nya_A Calerythrin; EF-hand, m 99.3 3E-12 1E-16 114.0 9.3 135 164-302 4-166 (176)
145 2sas_A Sarcoplasmic calcium-bi 99.3 7.7E-12 2.6E-16 112.1 11.9 136 164-301 5-168 (185)
146 2r2i_A Guanylyl cyclase-activa 99.3 1.7E-11 5.7E-16 111.9 14.3 125 209-339 23-158 (198)
147 3q5i_A Protein kinase; CDPK, m 99.3 5.3E-12 1.8E-16 132.4 12.1 131 163-301 351-498 (504)
148 1sjj_A Actinin; 3-helix bundle 99.3 3.8E-12 1.3E-16 142.2 11.4 149 216-397 690-858 (863)
149 1s1e_A KV channel interacting 99.3 6.9E-12 2.4E-16 117.3 11.3 115 179-301 71-202 (224)
150 2lvv_A Flagellar calcium-bindi 99.3 2.2E-12 7.6E-17 120.8 7.9 131 163-301 47-199 (226)
151 1pva_A Parvalbumin; calcium bi 99.3 3.5E-12 1.2E-16 105.0 8.1 101 187-299 1-108 (110)
152 3ll8_B Calcineurin subunit B t 99.3 4.3E-12 1.5E-16 110.4 9.2 126 165-301 4-145 (155)
153 1qv0_A Obelin, OBL; photoprote 99.3 6.3E-12 2.2E-16 114.0 10.6 137 163-301 16-178 (195)
154 1uhk_A Aequorin 2, aequorin; E 99.3 7.7E-12 2.6E-16 112.9 11.0 137 163-301 12-174 (191)
155 3lij_A Calcium/calmodulin depe 99.3 6.3E-12 2.2E-16 131.5 12.0 132 162-301 341-489 (494)
156 3fs7_A Parvalbumin, thymic; ca 99.3 3.6E-12 1.2E-16 104.8 8.0 99 189-299 3-108 (109)
157 2l2e_A Calcium-binding protein 99.3 1.9E-11 6.6E-16 110.4 13.6 161 252-437 3-178 (190)
158 1g8i_A Frequenin, neuronal cal 99.3 5.9E-12 2E-16 113.8 9.8 59 242-300 65-127 (190)
159 1ggw_A Protein (CDC4P); light 99.3 3.9E-12 1.3E-16 109.0 7.9 123 167-299 5-138 (140)
160 1wdc_B Scallop myosin; calcium 99.3 6.8E-12 2.3E-16 109.7 9.4 128 162-301 13-151 (156)
161 2bec_A Calcineurin B homologou 99.3 6.2E-12 2.1E-16 115.1 9.6 131 163-301 25-184 (202)
162 3bow_A Calpain-2 catalytic sub 99.3 3E-12 1E-16 139.6 8.6 91 236-334 527-630 (714)
163 1s6i_A CDPK, calcium-dependent 99.3 9.6E-13 3.3E-17 119.6 3.9 126 167-300 10-144 (188)
164 2pvb_A Protein (parvalbumin); 99.3 4.8E-12 1.7E-16 103.8 7.8 99 188-299 2-107 (108)
165 1jba_A GCAP-2, protein (guanyl 99.3 4.3E-12 1.5E-16 116.4 8.2 127 165-299 20-175 (204)
166 3nyv_A Calmodulin-domain prote 99.3 6.1E-12 2.1E-16 131.1 10.2 131 163-301 331-481 (484)
167 5pal_A Parvalbumin; calcium-bi 99.3 4.9E-12 1.7E-16 104.0 7.0 100 189-300 2-108 (109)
168 2jul_A Calsenilin; EF-hand, ca 99.3 8.6E-12 2.9E-16 119.0 9.7 87 209-299 138-240 (256)
169 1rwy_A Parvalbumin alpha; EF-h 99.3 6.4E-12 2.2E-16 103.2 7.6 100 189-300 2-108 (109)
170 3sg6_A Gcamp2, myosin light ch 99.3 1.2E-11 4.2E-16 126.3 11.1 131 162-299 307-448 (450)
171 3akb_A Putative calcium bindin 99.3 2.3E-11 8E-16 106.9 11.2 125 209-339 13-159 (166)
172 1bu3_A Calcium-binding protein 99.3 5.2E-12 1.8E-16 103.8 6.2 100 188-299 2-108 (109)
173 3dtp_E RLC, myosin regulatory 99.3 5.2E-12 1.8E-16 115.5 6.6 127 164-301 54-190 (196)
174 2ggz_A Guanylyl cyclase-activa 99.3 1.5E-11 5.2E-16 113.6 9.8 119 208-329 27-155 (211)
175 2ct9_A Calcium-binding protein 99.2 1.8E-11 6E-16 112.8 9.6 131 163-301 25-183 (208)
176 3cs1_A Flagellar calcium-bindi 99.2 5.5E-12 1.9E-16 117.4 6.1 133 163-301 44-196 (219)
177 1rro_A RAT oncomodulin; calciu 99.2 1.1E-11 3.8E-16 101.6 7.3 99 189-299 2-107 (108)
178 2ovk_B RLC, myosin regulatory 99.2 4.9E-12 1.7E-16 110.2 5.1 127 163-301 12-149 (153)
179 3mwu_A Calmodulin-domain prote 99.2 1.5E-11 5.2E-16 128.3 9.8 133 163-301 327-482 (486)
180 3h4s_E KCBP interacting Ca2+-b 99.2 5.3E-12 1.8E-16 108.4 5.2 103 271-397 2-104 (135)
181 1fpw_A Yeast frequenin, calciu 99.2 4.2E-11 1.5E-15 108.1 10.2 160 252-436 3-177 (190)
182 1djx_A PLC-D1, phosphoinositid 99.2 7.3E-12 2.5E-16 133.9 5.4 132 238-397 9-148 (624)
183 3h4s_E KCBP interacting Ca2+-b 99.2 2.7E-11 9.2E-16 103.9 6.9 91 208-301 11-106 (135)
184 3a8r_A Putative uncharacterize 99.2 5.4E-11 1.9E-15 107.2 9.1 126 165-301 26-171 (179)
185 3fs7_A Parvalbumin, thymic; ca 99.2 1E-10 3.6E-15 95.9 10.0 99 272-397 10-108 (109)
186 2hps_A Coelenterazine-binding 99.2 3.4E-11 1.1E-15 108.4 7.5 146 163-315 10-181 (186)
187 5pal_A Parvalbumin; calcium-bi 99.2 1.8E-10 6.2E-15 94.5 10.6 100 271-397 8-107 (109)
188 2l4h_A Calcium and integrin-bi 99.1 1.3E-10 4.4E-15 107.8 10.4 124 166-300 50-202 (214)
189 1dgu_A Calcium-saturated CIB; 99.1 8.3E-11 2.8E-15 105.7 7.2 125 165-300 18-171 (183)
190 2qac_A Myosin A tail domain in 99.1 1.2E-10 4.1E-15 100.5 7.8 121 166-299 13-145 (146)
191 2pvb_A Protein (parvalbumin); 99.1 3.6E-10 1.2E-14 92.5 10.0 98 272-396 9-106 (108)
192 2kyc_A Parvalbumin-3, parvalbu 99.1 9.5E-12 3.3E-16 102.0 0.4 99 189-299 2-107 (108)
193 1bu3_A Calcium-binding protein 99.1 3.2E-10 1.1E-14 93.0 9.6 96 272-396 10-107 (109)
194 1rro_A RAT oncomodulin; calciu 99.1 3.4E-10 1.2E-14 92.6 9.5 98 272-396 9-106 (108)
195 1rwy_A Parvalbumin alpha; EF-h 99.1 4E-10 1.4E-14 92.3 9.7 98 272-396 9-106 (109)
196 1eg3_A Dystrophin; EF-hand lik 99.1 7.4E-10 2.5E-14 104.7 11.6 110 272-397 132-241 (261)
197 2zkm_X 1-phosphatidylinositol- 99.1 1.5E-10 5.1E-15 126.7 7.4 140 238-397 144-296 (799)
198 1pva_A Parvalbumin; calcium bi 99.1 6.7E-10 2.3E-14 91.1 9.7 98 272-396 10-107 (110)
199 2ehb_A Calcineurin B-like prot 99.0 9.2E-10 3.1E-14 100.9 10.4 158 251-434 11-183 (207)
200 2zfd_A Calcineurin B-like prot 99.0 1.7E-09 5.8E-14 100.9 10.6 120 209-333 57-190 (226)
201 3a4u_B Multiple coagulation fa 99.0 3.6E-10 1.2E-14 98.0 5.5 106 274-396 29-142 (143)
202 3a4u_B Multiple coagulation fa 99.0 3.1E-10 1.1E-14 98.3 4.5 91 208-298 35-142 (143)
203 4drw_A Protein S100-A10/annexi 99.0 7.6E-10 2.6E-14 92.7 6.3 66 235-301 10-84 (121)
204 1djx_A PLC-D1, phosphoinositid 98.9 1.8E-10 6.1E-15 123.1 2.8 125 164-300 8-149 (624)
205 2lv7_A Calcium-binding protein 98.9 1.5E-09 5.3E-14 87.9 6.1 66 234-299 30-99 (100)
206 2kyc_A Parvalbumin-3, parvalbu 98.9 3.1E-10 1.1E-14 92.8 1.1 97 273-396 10-106 (108)
207 2jjz_A Ionized calcium-binding 98.8 2.7E-09 9.1E-14 93.1 5.9 83 237-325 47-133 (150)
208 1sjj_A Actinin; 3-helix bundle 98.8 1.4E-09 4.8E-14 121.4 4.7 125 165-300 723-859 (863)
209 2kld_A Polycystin-2; PC2, PKD2 98.8 2.1E-10 7.3E-15 96.8 -1.7 101 186-301 2-109 (123)
210 3ohm_B 1-phosphatidylinositol- 98.8 2E-08 6.7E-13 110.2 11.9 139 239-397 149-300 (885)
211 1wy9_A Allograft inflammatory 98.8 3.8E-09 1.3E-13 91.8 5.1 83 237-325 45-131 (147)
212 2kn2_A Calmodulin; S MAPK phos 98.8 1.9E-08 6.4E-13 79.6 8.4 82 235-316 4-91 (92)
213 1s6j_A CDPK, calcium-dependent 98.7 1.3E-09 4.5E-14 85.3 0.3 81 212-298 1-85 (87)
214 3n22_A Protein S100-A2; EF-han 98.7 1.6E-08 5.5E-13 81.5 6.3 67 235-301 6-83 (98)
215 3nso_A Protein S100-A3; EF-han 98.7 1.1E-08 3.9E-13 82.8 5.1 67 235-301 5-82 (101)
216 4eto_A Protein S100-A4; calciu 98.7 1.8E-08 6.3E-13 80.3 6.2 67 235-301 5-82 (93)
217 3zwh_A Protein S100-A4; Ca-bin 98.7 1.9E-08 6.5E-13 82.0 6.1 68 234-301 7-85 (104)
218 2lnk_A Protein S100-A4; EF-han 98.7 2.8E-08 9.7E-13 82.1 7.1 67 235-301 17-94 (113)
219 1eg3_A Dystrophin; EF-hand lik 98.7 6.9E-08 2.3E-12 91.2 10.0 85 208-299 140-241 (261)
220 1s6j_A CDPK, calcium-dependent 98.7 2.2E-08 7.7E-13 78.2 5.5 85 284-396 1-85 (87)
221 2opo_A Polcalcin CHE A 3; calc 98.7 5.5E-08 1.9E-12 75.8 7.6 67 235-301 6-75 (86)
222 1fi6_A EH domain protein REPS1 98.6 4E-08 1.4E-12 78.1 6.4 67 235-301 4-72 (92)
223 2zkm_X 1-phosphatidylinositol- 98.6 8.2E-09 2.8E-13 113.0 3.2 123 165-301 144-298 (799)
224 1xk4_C Calgranulin B; S100 fam 98.6 3.8E-08 1.3E-12 81.5 6.4 84 235-325 7-102 (113)
225 3nxa_A Protein S100-A16; S100 98.6 4.4E-08 1.5E-12 79.3 6.5 67 235-301 6-84 (100)
226 1j55_A S-100P protein; metal b 98.6 4.8E-08 1.7E-12 78.2 6.1 67 235-301 4-81 (95)
227 1c07_A Protein (epidermal grow 98.6 4.2E-08 1.4E-12 78.5 5.6 67 235-301 5-73 (95)
228 2joj_A Centrin protein; N-term 98.6 6.5E-08 2.2E-12 73.5 6.1 66 236-301 3-72 (77)
229 2ktg_A Calmodulin, putative; e 98.6 9.3E-08 3.2E-12 74.2 6.9 69 234-302 8-80 (85)
230 2kax_A Protein S100-A5; EF-han 98.6 5.8E-08 2E-12 77.2 5.5 67 235-301 5-79 (92)
231 2y5i_A S100Z, S100 calcium bin 98.6 6.5E-08 2.2E-12 78.1 5.8 67 235-301 5-82 (99)
232 2wcb_A Protein S100-A12; calci 98.6 4.3E-08 1.5E-12 78.5 4.5 67 235-301 7-84 (95)
233 2h2k_A Protein S100-A13; calci 98.6 6.6E-08 2.2E-12 79.1 5.7 67 235-301 17-91 (106)
234 1iq3_A Ralbp1-interacting prot 98.6 5.2E-08 1.8E-12 80.2 4.9 66 236-301 18-85 (110)
235 1qjt_A EH1, epidermal growth f 98.5 5.4E-08 1.8E-12 78.6 4.6 65 237-301 8-74 (99)
236 3rm1_A Protein S100-B; alpha-h 98.5 1E-07 3.5E-12 75.7 5.9 66 235-301 4-81 (92)
237 2pmy_A RAS and EF-hand domain- 98.5 1.3E-07 4.5E-12 74.7 6.6 67 235-301 22-90 (91)
238 1eh2_A EPS15; calcium binding, 98.5 1.7E-07 5.8E-12 76.6 7.1 66 235-301 10-77 (106)
239 2kgr_A Intersectin-1; structur 98.5 1.3E-07 4.5E-12 78.0 6.1 67 235-301 9-77 (111)
240 1tiz_A Calmodulin-related prot 98.5 9.2E-08 3.2E-12 70.4 4.6 60 241-300 2-65 (67)
241 1avs_A Troponin C; muscle cont 98.5 2E-07 6.9E-12 73.3 6.7 67 235-301 15-85 (90)
242 1psr_A Psoriasin, S100A7; EF-h 98.5 1.4E-07 4.7E-12 76.3 5.4 66 235-301 5-81 (100)
243 2lv7_A Calcium-binding protein 98.5 2E-07 6.8E-12 75.3 6.3 64 308-396 35-98 (100)
244 2kz2_A Calmodulin, CAM; TR2C, 98.5 3.7E-07 1.3E-11 72.7 7.6 78 294-396 14-91 (94)
245 2b1u_A Calmodulin-like protein 98.5 9.3E-08 3.2E-12 71.3 3.6 62 238-299 4-69 (71)
246 2kz2_A Calmodulin, CAM; TR2C, 98.4 3.2E-07 1.1E-11 73.0 6.7 64 236-299 25-92 (94)
247 3li6_A Calcium-binding protein 98.4 1E-07 3.5E-12 70.0 3.4 59 242-300 2-64 (66)
248 1xk4_A Calgranulin A; S100 fam 98.4 3.1E-07 1.1E-11 72.9 6.3 66 236-301 6-78 (93)
249 1qx2_A Vitamin D-dependent cal 98.4 2.6E-07 8.9E-12 69.8 5.6 64 238-301 3-74 (76)
250 1k9u_A Polcalcin PHL P 7; poll 98.4 4.3E-07 1.5E-11 69.2 6.9 62 240-301 3-67 (78)
251 1wlz_A DJBP, CAP-binding prote 98.4 2.8E-07 9.6E-12 74.6 6.1 80 217-301 6-89 (105)
252 1j7q_A CAVP, calcium vector pr 98.4 3.2E-07 1.1E-11 71.3 6.2 66 235-301 9-81 (86)
253 1cb1_A Calbindin D9K; calcium- 98.4 1.1E-07 3.7E-12 72.4 3.3 65 237-301 4-76 (78)
254 1k2h_A S100A1, S-100 protein, 98.4 2.3E-07 8E-12 73.3 5.3 66 236-301 5-81 (93)
255 1c7v_A CAVP, calcium vector pr 98.4 1.5E-07 5.1E-12 72.4 4.0 65 236-301 5-74 (81)
256 2jq6_A EH domain-containing pr 98.4 3.3E-07 1.1E-11 78.4 6.3 65 236-301 47-113 (139)
257 3qr0_A Phospholipase C-beta (P 98.4 2.5E-07 8.6E-12 100.9 6.8 129 249-397 164-307 (816)
258 1a4p_A S100A10; S100 family, E 98.4 3.5E-07 1.2E-11 73.2 5.8 66 235-301 4-78 (96)
259 1h8b_A ACT-EF34, alpha-actinin 98.4 5.4E-07 1.9E-11 68.5 6.3 59 238-300 8-71 (75)
260 3nso_A Protein S100-A3; EF-han 98.4 3.4E-07 1.2E-11 74.0 5.5 69 309-397 10-80 (101)
261 1qls_A S100C protein, calgizza 98.4 6.5E-07 2.2E-11 71.6 7.2 66 236-301 9-85 (99)
262 1yx7_A Calsensin, LAN3-6 antig 98.4 1.9E-07 6.4E-12 72.1 3.8 64 238-301 5-78 (83)
263 1k8u_A S100A6, calcyclin, CACY 98.4 3.6E-07 1.2E-11 71.5 5.3 66 236-301 6-80 (90)
264 2kld_A Polycystin-2; PC2, PKD2 98.4 3.1E-08 1.1E-12 83.4 -1.4 89 274-397 14-107 (123)
265 3n22_A Protein S100-A2; EF-han 98.3 5.9E-07 2E-11 72.2 6.2 70 309-397 11-81 (98)
266 2d58_A Allograft inflammatory 98.3 5.4E-07 1.9E-11 73.4 6.0 66 236-301 28-97 (107)
267 4eto_A Protein S100-A4; calciu 98.3 1.3E-06 4.6E-11 69.4 7.0 70 309-397 10-80 (93)
268 4drw_A Protein S100-A10/annexi 98.3 3.4E-07 1.2E-11 76.5 3.3 58 166-227 14-82 (121)
269 3zwh_A Protein S100-A4; Ca-bin 98.3 1.8E-06 6.2E-11 70.1 7.4 70 309-397 13-83 (104)
270 1snl_A Nucleobindin 1, calnuc; 98.3 6.8E-07 2.3E-11 72.4 4.9 60 241-300 21-100 (103)
271 1tiz_A Calmodulin-related prot 98.3 1E-06 3.5E-11 64.6 5.2 63 310-397 2-64 (67)
272 2b1u_A Calmodulin-like protein 98.2 1.2E-06 3.9E-11 65.2 5.3 66 306-396 3-68 (71)
273 1fi6_A EH domain protein REPS1 98.2 1.6E-06 5.3E-11 68.8 5.8 63 308-397 8-70 (92)
274 1wlz_A DJBP, CAP-binding prote 98.2 2.9E-06 9.9E-11 68.5 7.4 85 287-398 4-88 (105)
275 1c07_A Protein (epidermal grow 98.2 2.6E-06 8.9E-11 67.9 6.6 64 307-397 8-71 (95)
276 3li6_A Calcium-binding protein 98.2 6E-07 2.1E-11 65.8 2.6 63 312-399 3-65 (66)
277 2jjz_A Ionized calcium-binding 98.2 1.4E-06 4.6E-11 75.7 5.3 49 274-323 52-100 (150)
278 1qjt_A EH1, epidermal growth f 98.2 1.9E-06 6.6E-11 69.3 5.7 64 307-397 9-72 (99)
279 1k9u_A Polcalcin PHL P 7; poll 98.2 3E-06 1E-10 64.3 6.5 64 308-397 2-65 (78)
280 3ohm_B 1-phosphatidylinositol- 98.2 1.1E-05 3.7E-10 88.7 13.2 137 149-299 132-300 (885)
281 2lnk_A Protein S100-A4; EF-han 98.2 2E-06 6.9E-11 70.9 5.8 71 308-397 21-92 (113)
282 2joj_A Centrin protein; N-term 98.2 2.9E-06 9.8E-11 64.2 6.0 65 308-397 6-70 (77)
283 2kn2_A Calmodulin; S MAPK phos 98.2 4.4E-06 1.5E-10 65.6 7.3 67 307-398 7-73 (92)
284 3fia_A Intersectin-1; EH 1 dom 98.2 3.8E-06 1.3E-10 69.7 7.0 67 234-301 27-95 (121)
285 1avs_A Troponin C; muscle cont 98.1 5.7E-06 2E-10 64.7 7.6 65 308-397 19-83 (90)
286 2h2k_A Protein S100-A13; calci 98.1 2.1E-06 7.2E-11 70.0 5.1 67 309-397 22-89 (106)
287 2pmy_A RAS and EF-hand domain- 98.1 3.2E-06 1.1E-10 66.6 5.9 63 308-397 26-88 (91)
288 2ktg_A Calmodulin, putative; e 98.1 4.4E-06 1.5E-10 64.5 6.5 65 308-397 13-77 (85)
289 3nxa_A Protein S100-A16; S100 98.1 6.4E-06 2.2E-10 66.4 7.5 70 309-398 11-83 (100)
290 2y5i_A S100Z, S100 calcium bin 98.1 4.5E-06 1.5E-10 67.1 6.5 71 308-397 9-80 (99)
291 1c7v_A CAVP, calcium vector pr 98.1 2.3E-06 8E-11 65.5 4.4 68 305-397 5-72 (81)
292 2wcb_A Protein S100-A12; calci 98.1 3.5E-06 1.2E-10 67.2 5.5 71 308-397 11-82 (95)
293 3rm1_A Protein S100-B; alpha-h 98.1 6.2E-06 2.1E-10 65.2 6.9 69 309-397 9-79 (92)
294 2opo_A Polcalcin CHE A 3; calc 98.1 5.9E-06 2E-10 64.0 6.5 64 308-397 10-73 (86)
295 1j55_A S-100P protein; metal b 98.1 4.7E-06 1.6E-10 66.4 5.8 71 308-397 8-79 (95)
296 1qx2_A Vitamin D-dependent cal 98.1 2.8E-06 9.4E-11 64.0 4.2 66 307-397 3-72 (76)
297 1yx7_A Calsensin, LAN3-6 antig 98.0 3.3E-06 1.1E-10 64.9 4.3 68 306-396 4-75 (83)
298 2kgr_A Intersectin-1; structur 98.0 8.3E-06 2.8E-10 67.0 6.5 63 308-397 13-75 (111)
299 2kax_A Protein S100-A5; EF-han 98.0 5E-06 1.7E-10 65.8 4.8 66 309-397 10-77 (92)
300 1wy9_A Allograft inflammatory 98.0 2.1E-06 7E-11 74.3 2.5 75 209-288 57-131 (147)
301 1k2h_A S100A1, S-100 protein, 98.0 1.2E-05 3.9E-10 63.3 6.7 70 308-397 8-79 (93)
302 2jq6_A EH domain-containing pr 98.0 8.1E-06 2.8E-10 69.7 6.0 63 307-397 49-111 (139)
303 1iq3_A Ralbp1-interacting prot 98.0 3.7E-06 1.3E-10 69.1 3.3 65 306-397 19-83 (110)
304 1j7q_A CAVP, calcium vector pr 98.0 1.5E-05 5.1E-10 61.7 6.6 65 307-397 12-79 (86)
305 1sra_A Sparc; extracellular ma 98.0 7.1E-06 2.4E-10 70.4 5.0 64 238-301 75-141 (151)
306 1eh2_A EPS15; calcium binding, 97.9 1.4E-05 4.9E-10 65.0 6.4 62 308-397 14-75 (106)
307 1xk4_C Calgranulin B; S100 fam 97.9 1.8E-05 6.3E-10 65.1 6.9 66 309-397 12-83 (113)
308 3qr0_A Phospholipase C-beta (P 97.9 2.8E-05 9.5E-10 84.9 9.9 122 209-340 164-308 (816)
309 2d58_A Allograft inflammatory 97.9 1.7E-05 5.6E-10 64.4 6.2 65 308-397 31-95 (107)
310 1cb1_A Calbindin D9K; calcium- 97.9 7.7E-06 2.6E-10 61.8 3.8 67 307-397 5-74 (78)
311 1psr_A Psoriasin, S100A7; EF-h 97.9 3.2E-05 1.1E-09 62.2 7.4 61 163-227 6-79 (100)
312 1xk4_A Calgranulin A; S100 fam 97.9 6.2E-06 2.1E-10 65.2 2.8 65 309-397 10-76 (93)
313 1k8u_A S100A6, calcyclin, CACY 97.8 1.5E-05 5.1E-10 62.1 4.7 67 309-397 10-78 (90)
314 1qls_A S100C protein, calgizza 97.8 2.1E-05 7.1E-10 62.6 4.8 69 309-397 13-83 (99)
315 1snl_A Nucleobindin 1, calnuc; 97.7 4.4E-05 1.5E-09 61.5 5.5 75 309-396 20-98 (103)
316 1h8b_A ACT-EF34, alpha-actinin 97.6 8.5E-05 2.9E-09 56.2 6.0 60 305-397 6-70 (75)
317 1a4p_A S100A10; S100 family, E 97.6 6.3E-05 2.2E-09 59.9 5.4 61 163-227 5-76 (96)
318 3fia_A Intersectin-1; EH 1 dom 97.4 0.00026 8.7E-09 58.7 6.2 62 309-398 33-94 (121)
319 1nub_A Basement membrane prote 97.3 0.00024 8.2E-09 65.9 5.4 63 239-301 154-219 (229)
320 1sra_A Sparc; extracellular ma 97.1 0.00012 4.2E-09 62.7 1.4 63 309-398 77-140 (151)
321 1tuz_A Diacylglycerol kinase a 97.0 0.0002 6.7E-09 59.0 1.9 90 215-310 6-114 (118)
322 1zsq_A Myotubularin-related pr 97.0 0.00087 3E-08 69.3 6.4 99 8-123 6-112 (528)
323 1lw3_A Myotubularin-related pr 96.9 0.0011 3.8E-08 69.8 6.2 99 8-123 78-184 (657)
324 1tuz_A Diacylglycerol kinase a 96.8 0.003 1E-07 51.9 7.0 94 253-361 4-106 (118)
325 3hsa_A Pleckstrin homology dom 96.5 0.0026 9E-08 52.5 4.7 91 8-125 25-124 (126)
326 2jt1_A PEFI protein; solution 96.3 0.0043 1.5E-07 46.9 4.6 59 409-467 5-69 (77)
327 1xn7_A Hypothetical protein YH 96.0 0.011 3.9E-07 44.7 5.5 47 409-455 3-49 (78)
328 1pfj_A TFIIH basal transcripti 95.9 0.024 8.2E-07 45.3 7.3 76 13-113 4-83 (108)
329 2k02_A Ferrous iron transport 95.6 0.011 3.9E-07 45.6 4.3 46 410-455 4-49 (87)
330 1nub_A Basement membrane prote 95.5 0.0036 1.2E-07 57.9 1.4 65 309-400 155-220 (229)
331 1zyi_A Methylosome subunit pic 95.5 0.0054 1.8E-07 53.6 2.5 54 8-63 14-71 (171)
332 2htj_A P fimbrial regulatory p 94.7 0.072 2.5E-06 40.3 6.4 55 411-465 3-59 (81)
333 1qbj_A Protein (double-strande 94.7 0.064 2.2E-06 40.8 5.9 57 408-465 10-69 (81)
334 1oyi_A Double-stranded RNA-bin 94.2 0.073 2.5E-06 40.4 5.3 60 405-466 14-73 (82)
335 1xmk_A Double-stranded RNA-spe 94.2 0.049 1.7E-06 41.2 4.2 50 406-455 9-59 (79)
336 1y5o_A TFB1, RNA polymerase II 94.1 0.14 4.7E-06 41.1 6.9 83 35-126 11-105 (115)
337 1qgp_A Protein (double strande 94.1 0.049 1.7E-06 41.0 4.2 54 410-464 16-72 (77)
338 2yf0_A Myotubularin-related pr 93.2 0.058 2E-06 55.4 4.2 77 18-112 6-85 (512)
339 2fu4_A Ferric uptake regulatio 92.3 0.16 5.5E-06 38.4 4.7 54 411-464 20-80 (83)
340 3b73_A PHIH1 repressor-like pr 91.4 0.15 5.2E-06 41.2 3.7 46 411-456 16-63 (111)
341 3cuo_A Uncharacterized HTH-typ 89.5 0.36 1.2E-05 37.4 4.4 47 411-457 27-73 (99)
342 3jth_A Transcription activator 89.0 0.42 1.4E-05 37.2 4.5 54 411-465 26-79 (98)
343 1y0u_A Arsenical resistance op 89.0 0.62 2.1E-05 36.1 5.4 50 411-466 34-83 (96)
344 1p6r_A Penicillinase repressor 88.9 0.35 1.2E-05 36.4 3.7 55 411-465 12-70 (82)
345 2qpt_A EH domain-containing pr 88.7 0.47 1.6E-05 49.6 5.9 65 236-301 454-520 (550)
346 3i4p_A Transcriptional regulat 88.7 0.66 2.2E-05 40.0 5.9 44 411-454 6-49 (162)
347 2heo_A Z-DNA binding protein 1 88.5 0.61 2.1E-05 33.8 4.7 45 410-454 12-57 (67)
348 1wi9_A Protein C20ORF116 homol 88.2 0.74 2.5E-05 33.7 4.8 51 407-457 6-58 (72)
349 1u2w_A CADC repressor, cadmium 88.0 0.58 2E-05 38.2 4.8 55 411-465 45-99 (122)
350 1sfu_A 34L protein; protein/Z- 87.9 1.3 4.5E-05 32.8 6.1 53 405-457 9-64 (75)
351 1on2_A Transcriptional regulat 87.4 0.89 3.1E-05 37.8 5.8 51 406-456 6-56 (142)
352 3hrs_A Metalloregulator SCAR; 87.3 0.7 2.4E-05 41.9 5.4 52 405-456 3-54 (214)
353 2cfx_A HTH-type transcriptiona 87.3 0.91 3.1E-05 38.1 5.7 44 411-454 8-51 (144)
354 2p5v_A Transcriptional regulat 87.3 0.88 3E-05 39.1 5.8 44 411-454 13-56 (162)
355 3b77_A Uncharacterized protein 87.1 0.46 1.6E-05 41.8 3.7 88 8-124 19-121 (193)
356 2dbb_A Putative HTH-type trans 86.6 0.95 3.3E-05 38.3 5.5 44 411-454 12-55 (151)
357 2k4b_A Transcriptional regulat 86.5 0.52 1.8E-05 37.2 3.5 53 413-465 40-96 (99)
358 1i1g_A Transcriptional regulat 86.5 1.1 3.8E-05 37.2 5.9 46 411-456 7-52 (141)
359 2w25_A Probable transcriptiona 86.4 1 3.4E-05 38.1 5.6 44 411-454 10-53 (150)
360 2cg4_A Regulatory protein ASNC 86.4 0.95 3.2E-05 38.4 5.4 44 411-454 11-54 (152)
361 2pn6_A ST1022, 150AA long hypo 86.4 1.1 3.6E-05 37.9 5.7 44 411-454 6-49 (150)
362 3i71_A Ethanolamine utilizatio 86.4 1.5 5.1E-05 30.4 5.1 39 418-456 14-52 (68)
363 2e1c_A Putative HTH-type trans 86.0 1.3 4.3E-05 38.6 6.1 44 411-454 30-73 (171)
364 2cyy_A Putative HTH-type trans 85.8 1.2 4.2E-05 37.6 5.9 44 411-454 10-53 (151)
365 2h09_A Transcriptional regulat 85.1 1.4 4.8E-05 37.3 5.9 50 407-456 39-88 (155)
366 1r1u_A CZRA, repressor protein 85.1 0.88 3E-05 36.0 4.3 54 411-465 29-82 (106)
367 1sfx_A Conserved hypothetical 85.0 0.86 3E-05 35.6 4.2 48 411-458 23-70 (109)
368 2ia0_A Putative HTH-type trans 84.8 1.4 4.7E-05 38.4 5.8 44 411-454 20-63 (171)
369 2x4h_A Hypothetical protein SS 84.8 1.5 5.1E-05 36.2 5.8 50 407-456 16-65 (139)
370 2kko_A Possible transcriptiona 84.7 0.71 2.4E-05 36.8 3.6 53 412-465 29-81 (108)
371 2oqg_A Possible transcriptiona 84.5 0.9 3.1E-05 36.2 4.2 46 411-457 24-69 (114)
372 3pqk_A Biofilm growth-associat 84.0 1.2 4.2E-05 34.7 4.7 54 411-465 26-79 (102)
373 3k2z_A LEXA repressor; winged 83.9 1.6 5.5E-05 38.8 5.9 51 407-457 8-59 (196)
374 3ech_A MEXR, multidrug resista 83.2 1.2 4.2E-05 36.8 4.6 48 412-459 41-88 (142)
375 3bpv_A Transcriptional regulat 82.6 1.5 5E-05 35.9 4.8 48 412-459 33-80 (138)
376 3g3z_A NMB1585, transcriptiona 82.4 1.9 6.4E-05 35.7 5.5 48 412-459 35-82 (145)
377 3bro_A Transcriptional regulat 82.3 1.9 6.5E-05 35.4 5.5 47 414-460 40-88 (141)
378 1r7j_A Conserved hypothetical 82.2 2.5 8.5E-05 32.8 5.7 50 406-457 6-55 (95)
379 2fbh_A Transcriptional regulat 82.0 2.2 7.7E-05 35.1 5.8 47 413-459 42-89 (146)
380 3tgn_A ADC operon repressor AD 81.6 2.1 7E-05 35.4 5.4 48 411-459 41-88 (146)
381 2jsc_A Transcriptional regulat 81.1 1.3 4.5E-05 35.8 3.9 55 411-466 24-78 (118)
382 3bj6_A Transcriptional regulat 81.1 1.9 6.6E-05 35.9 5.1 48 413-460 45-92 (152)
383 2pex_A Transcriptional regulat 81.0 1.6 5.5E-05 36.5 4.6 47 413-459 52-98 (153)
384 2fa5_A Transcriptional regulat 81.0 2.4 8.1E-05 35.8 5.7 47 413-459 54-100 (162)
385 3bdd_A Regulatory protein MARR 80.9 1.8 6.3E-05 35.5 4.8 48 412-459 35-82 (142)
386 3nrv_A Putative transcriptiona 80.8 2.2 7.7E-05 35.3 5.4 48 412-459 44-91 (148)
387 2rdp_A Putative transcriptiona 80.7 1.8 6E-05 36.1 4.7 47 413-459 47-93 (150)
388 1ku9_A Hypothetical protein MJ 80.7 2 6.9E-05 35.5 5.1 40 420-459 39-78 (152)
389 1r1t_A Transcriptional repress 80.7 1.8 6.3E-05 35.2 4.6 53 412-465 50-102 (122)
390 2d1h_A ST1889, 109AA long hypo 80.6 2.1 7.1E-05 33.3 4.9 48 410-457 24-71 (109)
391 2hr3_A Probable transcriptiona 80.6 2.4 8.1E-05 35.1 5.5 48 412-459 39-87 (147)
392 2a61_A Transcriptional regulat 80.5 1.6 5.3E-05 36.1 4.3 47 413-459 38-84 (145)
393 2gxg_A 146AA long hypothetical 80.4 2.2 7.6E-05 35.2 5.3 46 413-459 42-87 (146)
394 3cdh_A Transcriptional regulat 80.2 2.3 7.8E-05 35.7 5.3 48 412-459 47-94 (155)
395 2qww_A Transcriptional regulat 80.2 2.1 7.3E-05 35.8 5.1 43 412-454 45-87 (154)
396 3f6o_A Probable transcriptiona 80.0 1.3 4.6E-05 35.7 3.6 46 411-457 21-66 (118)
397 3r0a_A Putative transcriptiona 79.9 2 6.8E-05 35.0 4.6 46 411-456 29-76 (123)
398 2lkp_A Transcriptional regulat 79.8 2.2 7.5E-05 34.2 4.8 51 413-464 37-87 (119)
399 1ub9_A Hypothetical protein PH 79.8 1.4 4.6E-05 34.0 3.5 46 411-456 19-64 (100)
400 3oop_A LIN2960 protein; protei 79.7 1.6 5.5E-05 36.1 4.1 47 413-459 42-88 (143)
401 3s2w_A Transcriptional regulat 79.5 1.8 6.3E-05 36.5 4.5 48 412-459 54-101 (159)
402 4hbl_A Transcriptional regulat 79.2 1.9 6.5E-05 36.0 4.4 49 412-460 45-93 (149)
403 3eco_A MEPR; mutlidrug efflux 79.2 2.1 7.1E-05 35.1 4.6 48 413-460 36-85 (139)
404 2xzm_8 RPS25E,; ribosome, tran 79.2 1.8 6.2E-05 35.9 4.0 51 404-454 44-95 (143)
405 1tbx_A ORF F-93, hypothetical 79.1 2.3 8E-05 32.8 4.6 47 412-458 12-62 (99)
406 1lj9_A Transcriptional regulat 78.7 2.2 7.6E-05 35.1 4.7 47 413-459 34-80 (144)
407 2nnn_A Probable transcriptiona 78.6 1.9 6.7E-05 35.2 4.3 46 413-458 43-88 (140)
408 1jgs_A Multiple antibiotic res 78.6 2.3 7.9E-05 34.7 4.7 45 414-458 40-84 (138)
409 3hsr_A HTH-type transcriptiona 78.3 1.4 5E-05 36.3 3.4 47 413-459 41-87 (140)
410 2vxz_A Pyrsv_GP04; viral prote 78.2 3.3 0.00011 34.8 5.3 45 408-453 11-55 (165)
411 2p5k_A Arginine repressor; DNA 78.1 3.3 0.00011 28.9 4.8 50 411-464 8-62 (64)
412 3cjn_A Transcriptional regulat 78.0 2.2 7.5E-05 36.1 4.5 48 412-459 56-103 (162)
413 2nyx_A Probable transcriptiona 77.9 1.9 6.5E-05 36.9 4.1 47 413-459 50-96 (168)
414 3k0l_A Repressor protein; heli 77.4 2.2 7.6E-05 36.1 4.4 48 412-459 50-97 (162)
415 1s3j_A YUSO protein; structura 77.2 1.7 5.9E-05 36.3 3.6 47 413-459 42-88 (155)
416 2frh_A SARA, staphylococcal ac 76.9 3.3 0.00011 33.6 5.1 46 414-459 43-90 (127)
417 3u5c_Z RP45, S31, YS23, 40S ri 76.8 1.6 5.5E-05 34.6 2.9 50 406-455 43-92 (108)
418 2eth_A Transcriptional regulat 76.3 3.1 0.0001 34.9 4.9 47 412-458 48-94 (154)
419 2hzt_A Putative HTH-type trans 76.2 3.8 0.00013 32.3 5.1 44 413-457 19-63 (107)
420 3e6m_A MARR family transcripti 76.0 2.1 7.3E-05 36.2 3.9 47 413-459 58-104 (161)
421 2g9w_A Conserved hypothetical 75.9 3.1 0.00011 34.5 4.8 54 411-464 12-70 (138)
422 1z91_A Organic hydroperoxide r 75.8 2.3 7.8E-05 35.2 3.9 47 413-459 45-91 (147)
423 1sd4_A Penicillinase repressor 75.3 2 6.9E-05 34.7 3.4 47 411-457 13-63 (126)
424 3deu_A Transcriptional regulat 75.2 3 0.0001 35.6 4.7 47 413-459 58-105 (166)
425 2xvc_A ESCRT-III, SSO0910; cel 75.1 5.4 0.00019 27.6 4.8 44 411-454 13-57 (59)
426 2vn2_A DNAD, chromosome replic 74.9 5.9 0.0002 32.4 6.1 37 421-457 50-86 (128)
427 2bv6_A MGRA, HTH-type transcri 74.7 1.6 5.5E-05 36.0 2.7 48 413-460 42-89 (142)
428 1q1h_A TFE, transcription fact 74.7 3.7 0.00013 32.4 4.7 38 418-455 29-66 (110)
429 2fbi_A Probable transcriptiona 74.4 2.2 7.7E-05 34.9 3.5 46 413-458 41-86 (142)
430 1pul_A Hypothetical protein C3 73.6 11 0.00039 30.7 7.3 34 366-400 61-94 (125)
431 1uly_A Hypothetical protein PH 73.0 4.6 0.00016 35.8 5.3 44 411-455 23-66 (192)
432 3iz6_V 40S ribosomal protein S 72.9 1.5 5.1E-05 34.9 1.8 51 406-456 44-94 (108)
433 2pg4_A Uncharacterized protein 72.6 4.2 0.00014 31.1 4.4 42 414-455 21-64 (95)
434 3jw4_A Transcriptional regulat 72.4 3 0.0001 34.6 3.8 39 421-459 56-94 (148)
435 3bja_A Transcriptional regulat 72.1 2.2 7.5E-05 34.8 2.9 47 412-458 37-83 (139)
436 2dk5_A DNA-directed RNA polyme 71.9 8.3 0.00028 29.6 5.9 52 411-462 23-78 (91)
437 3fm5_A Transcriptional regulat 71.3 4.9 0.00017 33.3 5.0 41 419-459 51-91 (150)
438 2qpt_A EH domain-containing pr 71.0 7.9 0.00027 40.2 7.4 32 366-397 487-518 (550)
439 3f6v_A Possible transcriptiona 70.9 2.9 9.8E-05 35.5 3.4 47 409-456 59-105 (151)
440 2b0l_A GTP-sensing transcripti 70.8 2 6.9E-05 33.9 2.2 47 410-456 30-77 (102)
441 3f3x_A Transcriptional regulat 70.8 3.6 0.00012 33.9 4.0 47 412-459 41-87 (144)
442 2v7f_A RPS19, RPS19E SSU ribos 70.8 8.2 0.00028 32.7 6.2 89 367-456 7-115 (150)
443 2kav_A Sodium channel protein 70.6 3.7 0.00013 33.9 3.8 66 235-301 38-111 (129)
444 1z7u_A Hypothetical protein EF 70.5 5 0.00017 31.9 4.6 45 413-458 27-72 (112)
445 1okr_A MECI, methicillin resis 70.5 2.4 8.1E-05 34.1 2.7 46 412-457 14-63 (123)
446 3kp7_A Transcriptional regulat 70.4 3 0.0001 34.7 3.4 41 413-454 43-83 (151)
447 1mkm_A ICLR transcriptional re 70.3 5.8 0.0002 36.5 5.6 45 411-455 11-56 (249)
448 2fxa_A Protease production reg 69.4 3.6 0.00012 36.7 3.9 48 413-460 53-100 (207)
449 2f2e_A PA1607; transcription f 69.4 7.1 0.00024 32.7 5.5 44 413-457 29-72 (146)
450 2wte_A CSA3; antiviral protein 69.2 4.6 0.00016 37.2 4.6 45 411-455 155-199 (244)
451 3df8_A Possible HXLR family tr 68.7 6.7 0.00023 31.1 5.0 44 413-457 32-78 (111)
452 4a5n_A Uncharacterized HTH-typ 68.3 6.5 0.00022 32.5 4.9 40 420-459 37-77 (131)
453 3nqo_A MARR-family transcripti 67.9 5.8 0.0002 34.7 4.8 40 420-459 55-94 (189)
454 2v79_A DNA replication protein 67.2 9.8 0.00033 31.5 5.8 36 420-455 49-84 (135)
455 3boq_A Transcriptional regulat 66.9 2.5 8.4E-05 35.6 2.1 47 413-459 52-99 (160)
456 2y75_A HTH-type transcriptiona 66.6 12 0.00041 30.3 6.3 39 420-458 24-62 (129)
457 4aik_A Transcriptional regulat 66.3 8.2 0.00028 32.3 5.3 42 418-459 42-83 (151)
458 1yyv_A Putative transcriptiona 65.7 5.6 0.00019 32.7 4.0 46 412-458 39-85 (131)
459 2fsw_A PG_0823 protein; alpha- 65.3 6 0.0002 31.1 4.0 45 413-458 30-75 (107)
460 2xzm_T RPS19E; ribosome, trans 65.2 52 0.0018 27.7 9.7 89 367-456 13-121 (155)
461 3htu_A Vacuolar protein-sortin 65.0 15 0.00052 27.3 5.8 61 404-464 5-79 (79)
462 1j5y_A Transcriptional regulat 64.8 11 0.00037 33.0 6.0 48 408-455 21-70 (187)
463 4fl4_A Glycoside hydrolase fam 64.5 6.4 0.00022 30.1 3.8 17 210-226 24-40 (88)
464 2o0y_A Transcriptional regulat 63.6 5.2 0.00018 37.1 3.8 43 420-465 36-78 (260)
465 3o2p_E Cell division control p 63.4 5.5 0.00019 30.5 3.2 36 428-464 51-86 (88)
466 2xrn_A HTH-type transcriptiona 62.8 6.6 0.00023 35.9 4.4 46 412-457 10-56 (241)
467 1pul_A Hypothetical protein C3 60.5 37 0.0013 27.6 7.8 63 238-301 23-93 (125)
468 1stz_A Heat-inducible transcri 59.8 14 0.00048 35.8 6.2 60 409-468 18-91 (338)
469 1bia_A BIRA bifunctional prote 59.4 14 0.00047 35.4 6.1 55 408-462 5-59 (321)
470 2ccl_B Endo-1,4-beta-xylanase 59.1 10 0.00036 26.7 3.9 20 278-297 36-55 (63)
471 4fl4_A Glycoside hydrolase fam 57.9 9.6 0.00033 29.1 3.7 53 249-301 23-79 (88)
472 3cuq_C Vacuolar protein-sortin 57.5 26 0.00088 30.4 6.8 95 366-464 68-176 (176)
473 3u2r_A Regulatory protein MARR 57.4 5.2 0.00018 34.0 2.4 40 420-459 60-99 (168)
474 2qvo_A Uncharacterized protein 57.3 11 0.00038 28.7 4.2 30 423-452 31-60 (95)
475 3tdu_C Cullin-1, CUL-1; E2:E3, 56.6 6.9 0.00024 29.1 2.6 35 428-462 39-73 (77)
476 2y3n_B Cellulosomal family-48 56.5 12 0.00042 27.1 4.0 20 279-298 38-57 (71)
477 2fe3_A Peroxide operon regulat 56.5 22 0.00074 29.6 6.2 54 411-464 25-84 (145)
478 4dck_A Sodium channel protein 56.3 11 0.00037 32.5 4.2 66 235-301 15-88 (168)
479 2l5y_A Stromal interaction mol 56.3 22 0.00074 30.0 6.0 32 272-303 15-46 (150)
480 4dh2_B Dockerin type 1; cellul 56.1 6 0.0002 29.8 2.3 20 278-297 41-60 (82)
481 2zkz_A Transcriptional repress 55.9 6.5 0.00022 30.4 2.6 44 412-456 31-74 (99)
482 4b8x_A SCO5413, possible MARR- 55.8 8.1 0.00028 32.2 3.4 41 419-459 48-88 (147)
483 2p4w_A Transcriptional regulat 54.6 9.8 0.00033 33.9 3.8 46 411-457 18-63 (202)
484 1wlm_A Protein CGI-38; structu 54.6 24 0.00081 29.8 6.0 54 366-419 56-112 (151)
485 4a0z_A Transcription factor FA 54.5 12 0.0004 33.0 4.3 48 407-454 11-58 (190)
486 2p8t_A Hypothetical protein PH 54.2 19 0.00066 31.9 5.6 52 402-456 13-64 (200)
487 2l5y_A Stromal interaction mol 54.1 25 0.00085 29.6 6.0 61 237-300 12-75 (150)
488 2pjp_A Selenocysteine-specific 53.7 15 0.0005 29.6 4.5 50 407-456 65-114 (121)
489 3mq0_A Transcriptional repress 53.5 9.2 0.00031 35.8 3.7 45 413-457 35-80 (275)
490 3r4k_A Transcriptional regulat 53.2 6.7 0.00023 36.4 2.6 38 420-457 19-56 (260)
491 1fx7_A Iron-dependent represso 52.9 21 0.00071 32.2 5.9 50 406-457 8-59 (230)
492 2qq9_A Diphtheria toxin repres 52.7 24 0.00082 31.7 6.3 51 406-456 8-58 (226)
493 1mzb_A Ferric uptake regulatio 51.6 22 0.00075 29.1 5.4 54 411-464 21-81 (136)
494 2kav_A Sodium channel protein 51.2 5.5 0.00019 32.8 1.4 52 243-303 23-74 (129)
495 2jrf_A Tubulin polymerization- 51.0 27 0.00094 30.4 5.9 55 366-420 49-106 (184)
496 1xb4_A VPS25, hypothetical 23. 50.5 40 0.0014 29.9 7.0 97 366-464 84-200 (202)
497 2w48_A Sorbitol operon regulat 50.5 28 0.00097 33.0 6.7 45 408-453 8-52 (315)
498 2o03_A Probable zinc uptake re 50.2 17 0.00059 29.6 4.4 54 411-464 14-74 (131)
499 3f8m_A GNTR-family protein tra 49.1 20 0.00069 32.8 5.2 48 411-461 25-73 (248)
500 2qc0_A Uncharacterized protein 49.1 15 0.00052 36.0 4.6 54 412-466 301-354 (373)
No 1
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=100.00 E-value=1.7e-60 Score=491.17 Aligned_cols=372 Identities=21% Similarity=0.323 Sum_probs=130.8
Q ss_pred CCccccc------CCCCCCCCceEEeecceeeecCCCC-CcccCcEEEeeeeeeeee-----cCccccccchhhhhHHHh
Q psy4132 1 MDRFEYC------SFELSPDESPVLKHSNVRLYDGENK-SQFQRGELILTSHRLFWQ-----KDITLCLALSYIQNAVEE 68 (473)
Q Consensus 1 ~~~~~~~------~~~l~~~E~~~~~~~~v~ly~g~~~-~~~~~G~l~LTshRii~~-----~~~~~~l~l~~v~~~~~~ 68 (473)
|++|+|+ .|.|.++|++++++++||||+|+.| ++||+|+||||||||||+ ..+|++|||++|.++++.
T Consensus 1 m~~~~~~~~t~s~rp~L~~~E~~l~vqd~VgLY~Gk~Ki~~~q~G~~yLTShRiiyvD~~~p~~~s~~l~L~~I~~~e~~ 80 (566)
T 1w7p_D 1 MEYWHYVETTSSGQPLLREGEKDIFIDQSVGLYHGKSKILQRQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYS 80 (566)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccccccccccCCcccCCCceEEEeecccccccCCcCCccccCceEEEEeeeEEEecCCCCcceEEEEEhHHcceeeee
Confidence 8999998 6889999999999999999999999 999999999999999999 348999999999999998
Q ss_pred hhhcccccCcccEEEEeecCCCCC---------------------------CC---------------------------
Q psy4132 69 AKSMFNLTAGRKIILYLSKAVPGK---------------------------NL--------------------------- 94 (473)
Q Consensus 69 ~~~~~~~~~s~ki~~~l~~~~~~~---------------------------~~--------------------------- 94 (473)
+ +| ++|||||+|++++...++ .|
T Consensus 81 a-gf--lksSpKI~L~l~~~~~~~~~~~~~~~~~~~~~~tWvC~ICsfsN~~~~~f~~~~~~~p~C~~CGi~p~~~~~k~ 157 (566)
T 1w7p_D 81 S-GF--LTRSPRLILFFKDPSSKDELGKSAETASADVVSTWVCPICMVSNETQGEFTKDTLPTPICINCGVPADYELTKS 157 (566)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred e-cc--ccCCCceEEeecCcccccccCCCCCCcccccccceeccccccCCCCCCCCCcccCCCCcccccCCCCchhhhhh
Confidence 8 56 399999999998643111 00
Q ss_pred --------------------------------------------------------------------------------
Q psy4132 95 -------------------------------------------------------------------------------- 94 (473)
Q Consensus 95 -------------------------------------------------------------------------------- 94 (473)
T Consensus 158 ~i~~~~~~~~~~~~~~~~~~~~~~~CP~CTF~NHPsl~~CEiCg~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (566)
T 1w7p_D 158 SINCSNAIDPNANPQNQFGVNSENICPACTFANHPQIGNCEICGHRLPNASKVRSKLNRLNFHDSRVHIELEKNSLARNK 237 (566)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhccccCCCcccCccccccccCCCCCcccccCChhhhcccccCCcCCCccccccccccccccccccccccccccccccc
Confidence
Q ss_pred --CCCC------CCCCCeEEEeccCCCchHHHHHHHHHHhhhhhhhccc-----cc--cc----c---c---------cc
Q psy4132 95 --GPSA------TSAYDYVKLSFREGIQNEFLDALKSTVDAKIWTVQNK-----SA--QQ----T---K---------LR 143 (473)
Q Consensus 95 --~p~~------~~~~~~iklsFr~gg~~~F~~~l~~~l~~~~w~~~~~-----~~--~~----~---~---------~~ 143 (473)
+|.. .+...|||||||+||++.||++|+++|.+++|+..+. +. ++ + . ..
T Consensus 238 sp~p~~~s~~~~~~~~~~iKLSFR~gg~~~F~~~L~~aL~~~~W~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 317 (566)
T 1w7p_D 238 SSHSALSSSSSTGSSTEFVQLSFRKSDGVLFSQATERALENILTEKNKHIFNQNVVSVNGVDMRKGASSHEYNNEVPFIE 317 (566)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcccccccCCCccCceEEEEEcCCCchHHHHHHHHHHHHHHhhhCCCccCCCcccccccccccccccccccccccccc
Confidence 1100 0124699999999999999999999999999985332 00 00 0 0 11
Q ss_pred cccccchHHHHHHHHHHHhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHH
Q psy4132 144 EIKTRTGIVGIERNIVEKQKETSSNINNAFKDLNQLMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFC 223 (473)
Q Consensus 144 ~~~~~~gi~gi~r~~~~~~~~~~~~l~eaF~~lD~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~ 223 (473)
...+++||+||+|+.++++++++..+.+||+||+++|..+++|++|++.+..++++....++.... .+-.. ++.
T Consensus 318 ~~~~~~GI~gler~~e~~~~~~~~~i~~Af~DL~~LM~~AkemV~La~~~~~~~~~~~~~~s~~~~---~~e~~---~~~ 391 (566)
T 1w7p_D 318 TKLSRIGISSLEKSRENQLLNNDILFNNALTDLNKLMSLATSIERLYKNSNITMKTKTLNLQDEST---VNEPK---TRR 391 (566)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCcccCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcc---chhhH---hhH
Confidence 234789999999999999999999999999999999999999999999998885444333221100 00000 110
Q ss_pred HHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchhccCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhccc
Q psy4132 224 SIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSV 303 (473)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~ 303 (473)
.. | ..+.+.-
T Consensus 392 s~---------------------------------------------------L--~Vtrd~~----------------- 401 (566)
T 1w7p_D 392 PL---------------------------------------------------L--ILDREKF----------------- 401 (566)
T ss_dssp ---------------------------------------------------------CCSSCC-----------------
T ss_pred hh---------------------------------------------------c--ccchhhc-----------------
Confidence 00 0 0111100
Q ss_pred CCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchh----hc-CCCccchhHHHHHHHhh-h-CCCCCCHHHHHHHH
Q psy4132 304 KGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPL----TS-AGGTMLLTDAYCRINRA-R-GLELLSPEDLLNSC 376 (473)
Q Consensus 304 ~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~----~~-~~g~i~l~d~~~~~~~~-~-g~~~ls~~ei~~~~ 376 (473)
...+.|..++.+++.+++.... .. .+|+|++.|+|+.+||+ + |.+++||+|+.++|
T Consensus 402 -----------------~s~~~f~~ELA~qI~E~c~~~~~~~l~~~nGGmItL~DL~~~~NRa~R~g~elISp~Dll~A~ 464 (566)
T 1w7p_D 402 -----------------LNKELFLDEIAREIYEFTLSEFKDLNSDTNYMIITLVDLYAMYNKSMRIGTGLISPMEMREAC 464 (566)
T ss_dssp -----------------CCHHHHHHHHHHHHHHHHHHTTCCSSCSCCCCEEEHHHHHHHHHHHTTTTTCCCCHHHHHHHH
T ss_pred -----------------CChhHHHHHHHHHHHHHHHhhhcccchhcCcCeEEHHHHHHHHHHhccCCCCccCHHHHHHHH
Confidence 1234577777789999988865 55 88999999999999999 8 88999999999999
Q ss_pred HHhccCCCCCeeHHhhhccceeeeecccCcHHHHHHHHHHHhhCCCCCHHHHHHhhC-------CcHHHHHHHHHHHHHc
Q psy4132 377 LALDKLPDSPIYLKTYSSGVKVLQLKSCEDASFVEKTYEIVSQNVFVTVEQFSRLAS-------VSLVIAKHRLLLAETH 449 (473)
Q Consensus 377 ~~~D~~~dg~Is~~EF~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~ls~~e~a~~~~-------~s~~~~~~~l~~~~~~ 449 (473)
+.+...+.|...+..|-+++.|+ ..... +.....++++++..+++|+.++++.++ |++.+|+|.|++||.+
T Consensus 465 ~~le~Lg~~~~~L~~~~sgvlVv-s~~~~-~~~~~~il~l~~~~g~vT~~~la~~lg~~~~~~~Ws~~~A~e~L~~~e~e 542 (566)
T 1w7p_D 465 ERFEHLGLNELKLVKVNKRILCV-TSEKF-DVVKEKLVDLIGDNPGSDLLRLTQILSSNNSKSNWTLGILMEVLQNCVDE 542 (566)
T ss_dssp TTGGGGTCTTCEEEECSSSCEEE-ESSCH-HHHHHHHHHHHTTSTTCCHHHHHHHHSCSSSCCCBCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCeEEEEEECCEEEEE-cCCCc-hHHHHHHHHHHHhcCCcCHHHHHHHhCCccccCcccHHHHHHHHHHHHHc
Confidence 99999877655488888888887 55544 788899999999899999999999999 9999999999999999
Q ss_pred CCccccCCcccccccccccCc
Q psy4132 450 GKLCRDQSIEGLRFYENKFLL 470 (473)
Q Consensus 450 g~l~~d~~~~g~~~~~n~~~~ 470 (473)
|.||||++++|++||+|.|+.
T Consensus 543 G~l~rDd~~~G~~yypNlf~~ 563 (566)
T 1w7p_D 543 GDLLIDKQLSGIYYYKNSYWP 563 (566)
T ss_dssp TSEEEEEETTEEEEEECCSSC
T ss_pred CCEEEECCCCceEEehhhccc
Confidence 999999999999999999984
No 2
>2hth_B Vacuolar protein sorting protein 36; GLUE domain, PH domain, viral budding, ubiquitin complex, protein transport; 2.70A {Homo sapiens} SCOP: b.55.1.12 PDB: 2dx5_A
Probab=100.00 E-value=3.7e-41 Score=290.02 Aligned_cols=131 Identities=37% Similarity=0.599 Sum_probs=121.7
Q ss_pred CCcccccCCCCCCCCceEEeecceeeecCCCCCcccCcEEEeeeeeeeee----cCccccccchhhhhHHHhhhhccccc
Q psy4132 1 MDRFEYCSFELSPDESPVLKHSNVRLYDGENKSQFQRGELILTSHRLFWQ----KDITLCLALSYIQNAVEEAKSMFNLT 76 (473)
Q Consensus 1 ~~~~~~~~~~l~~~E~~~~~~~~v~ly~g~~~~~~~~G~l~LTshRii~~----~~~~~~l~l~~v~~~~~~~~~~~~~~ 76 (473)
||||+|++|.|.+||+++++++||+||+|+.|++|++|+||||||||||+ +++|++|||++|.++++++++| +
T Consensus 3 M~r~~~~~p~L~~~E~il~~~~~V~Ly~g~~k~~~k~G~l~LTshRli~~d~~~~~~s~~lpl~~v~~~e~~~~~f---~ 79 (140)
T 2hth_B 3 MDRFVWTSGLLEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKNHECCMAILLSQIVFIEEQAAGI---G 79 (140)
T ss_dssp --CCEECCSCCCTTCCEEEEEEEEEEEETTCSSCCCCEEEEEESSEEEEEETTCCSCCEEEEGGGEEEEEEECCTT---S
T ss_pred ccceecCCCccCCCceEEEEcCCEEEecCCCCCCCcCCEEEEecCEEEEecCCCCceEEEEEhHHeeeeeeecccc---c
Confidence 99999999999999999999999999999999999999999999999999 5789999999999999999766 7
Q ss_pred CcccEEEEeecCCCCCCCCCCCCCCCCeEEEeccCCCchHHHHHHHHHHhhhhhhhcc
Q psy4132 77 AGRKIILYLSKAVPGKNLGPSATSAYDYVKLSFREGIQNEFLDALKSTVDAKIWTVQN 134 (473)
Q Consensus 77 ~s~ki~~~l~~~~~~~~~~p~~~~~~~~iklsFr~gg~~~F~~~l~~~l~~~~w~~~~ 134 (473)
+||||++++++++++++|||.+++++++||||||.||+++|+++|.+++.+|.|+..+
T Consensus 80 ~s~Ki~l~l~~~~~~~~~gp~~~s~~~~~kLsFr~Gg~~eF~~~L~~al~~k~W~~~~ 137 (140)
T 2hth_B 80 KSAKIVVHLHPAPPNKEPGPFQSSKNSYIKLSFKEHGQIEFYRRLSEEMTQRRWENMP 137 (140)
T ss_dssp SCCEEEEEECCCCCCSSSCCCSTTSCCEEEEEETTSCHHHHHHHHHHHHHHCCC----
T ss_pred cCceEEEEecCCCccCCCCCcccccCcEEEEEEcCCCChHHHHHHHHHHHHhhhcccC
Confidence 9999999999999999999999999999999999999999999999999999998754
No 3
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=99.96 E-value=5.7e-31 Score=227.14 Aligned_cols=120 Identities=26% Similarity=0.403 Sum_probs=109.1
Q ss_pred CCccccc------CCCCCCCCceEEeecceeeecCCCC-CcccCcEEEeeeeeeeee----c-CccccccchhhhhHHHh
Q psy4132 1 MDRFEYC------SFELSPDESPVLKHSNVRLYDGENK-SQFQRGELILTSHRLFWQ----K-DITLCLALSYIQNAVEE 68 (473)
Q Consensus 1 ~~~~~~~------~~~l~~~E~~~~~~~~v~ly~g~~~-~~~~~G~l~LTshRii~~----~-~~~~~l~l~~v~~~~~~ 68 (473)
|.+|++. .|.|.+||++|+++++|+||+|+.| +++++|+||||||||||+ + .+|++|||.+|.+++.+
T Consensus 9 ~~~~~~~~~t~s~rp~L~~~E~il~~~d~V~Ly~g~~k~~~~k~G~lyLTshRIIyv~~~~~~~~SfslPL~~v~~~e~~ 88 (145)
T 2cay_A 9 MEYWHYVETTSSGQPLLREGEKDIFIDQSVGLYHGKSKILQRQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYS 88 (145)
T ss_dssp GGTCEECCBCTTSCBCCCTTCCEEEEEEEEEEEETTEECTTCSSEEEEEESSEEEEEESSCHHHHCEEEEGGGEEEEEEE
T ss_pred hhhcchhhhccCCCcccCCCCEEEEEcCCcceecCCCCCcCCCccEEEEEcCeEEEecCCCCcceEEEeEhHheeeeeEE
Confidence 7889996 7779999999999999999999999 999999999999999999 2 27999999999999999
Q ss_pred hhhcccccCcccEEEEeecCCCCCCCCCCCCCCCCeEEEeccCCCchHHHHHHHHHHhhhhhhhc
Q psy4132 69 AKSMFNLTAGRKIILYLSKAVPGKNLGPSATSAYDYVKLSFREGIQNEFLDALKSTVDAKIWTVQ 133 (473)
Q Consensus 69 ~~~~~~~~~s~ki~~~l~~~~~~~~~~p~~~~~~~~iklsFr~gg~~~F~~~l~~~l~~~~w~~~ 133 (473)
+++| ++|+||+++++|. +++..++|||||.||+++|+++|.+++.++.|+..
T Consensus 89 ~~~f---g~s~Ki~l~~~p~----------~~~~~~~KLsFk~GGa~eF~~~l~~al~~~~~~~~ 140 (145)
T 2cay_A 89 SGFL---TRSPRLILFFKDP----------SSSTEFVQLSFRKSDGVLFSQATERALENILTEKN 140 (145)
T ss_dssp CSSS---SSSCEEEEEESSC----------SSTTCCEEEEESSSCCHHHHHHHHHHHHHHHHC--
T ss_pred cCcc---ccCceEEEEecCC----------CCCceEEEEEEcCCCchHHHHHHHHHHHHHHHhhc
Confidence 9765 7999999999742 67889999999999999999999999999999753
No 4
>3cuq_B Vacuolar protein-sorting-associated protein 36; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_B
Probab=99.95 E-value=3.3e-28 Score=225.07 Aligned_cols=148 Identities=46% Similarity=0.787 Sum_probs=139.3
Q ss_pred CchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccceeeeec
Q psy4132 323 DDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVLQLK 402 (473)
Q Consensus 323 dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl~~~ 402 (473)
.+.|..++..++.+++......++|+|++.|+|+.+||++|.+++||+|+.++|+.+..-+.| +.+..|-+++.|++..
T Consensus 70 ~~~f~~ELa~qi~e~c~~~~~~~GG~I~L~dl~~~~nraRG~~lVSp~Dl~~A~~~l~~Lg~~-~~l~~~~sg~~vvqs~ 148 (218)
T 3cuq_B 70 GTQYHMQLAKQLAGILQVPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEALKLP-LRLRVFDSGVMVIELQ 148 (218)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTSEEEHHHHHHHHHHTCSSSCCCHHHHHHHHHTTTTTTCS-EEEEECTTSBEEEEET
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCeEEHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHcCCC-EEEEEECCCcEEEEcC
Confidence 357888888999999999888999999999999999999999999999999999999988765 9999999999999999
Q ss_pred ccCcHHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcccccccccccCcc
Q psy4132 403 SCEDASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYENKFLLE 471 (473)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~n~~~~~ 471 (473)
+.+++....+++++++..+++|+.++++.++||+.+|++.|+.||.+|.+|||++++|++||||.|.+.
T Consensus 149 ~~~~~~~~~~il~~~~~~g~vt~~~la~~l~ws~~~a~e~L~~~e~~G~l~~D~~~eg~~y~pn~f~~~ 217 (218)
T 3cuq_B 149 SHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPNLFMTQ 217 (218)
T ss_dssp TCCGGGGHHHHHHHHHHTSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEESSSCEEEEECGGGCC
T ss_pred CCchHHHHHHHHHHHHHCCCcCHHHHHHHhCCCHHHHHHHHHHHHHcCCEEEECCCCceEEehhhcccC
Confidence 988888899999999999999999999999999999999999999999999999999999999999864
No 5
>1u5t_B Defective in vacuolar protein sorting; VPS36P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=99.87 E-value=1e-22 Score=180.56 Aligned_cols=145 Identities=19% Similarity=0.285 Sum_probs=130.6
Q ss_pred chhhHhhHHHHHHHHh---c-hhhcCCC-ccchhHHHHHHHhh-h-CCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccc
Q psy4132 324 DDYYQALGNELIAALI---E-PLTSAGG-TMLLTDAYCRINRA-R-GLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGV 396 (473)
Q Consensus 324 g~~~~~e~~el~~~L~---~-~~~~~~g-~i~l~d~~~~~~~~-~-g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~ 396 (473)
..|..++..++.+++. . ....++| +|++.|+++.+||+ + |.+++||+|+.++|+.+...+.|.+.+..|-+++
T Consensus 10 ~~f~~ELa~qi~e~c~~~~~~~~~~~GG~~I~L~dl~~~~nra~R~g~~lISp~Dl~~A~~~l~~Lg~~~~~l~~~~sg~ 89 (169)
T 1u5t_B 10 ELFLDEIAREIYEFTLSEFKDLNSDTNYMIITLVDLYAMYNKSMRIGTGLISPMEMREACERFEHLGLNELKLVKVNKRI 89 (169)
T ss_dssp TTHHHHHHHHHHHHHHTTTTTSSSCCCCCCEETTHHHHHHHHTTTSSSCCCCHHHHHHHHTTTGGGTCCSCEEEEETTTE
T ss_pred hHHHHHHHHHHHHHHhhcchhhHHhcCceeEEHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHhcCCCeEEEEEECCee
Confidence 3688889999999999 5 6677889 99999999999999 9 8899999999999999999988779999999999
Q ss_pred eeeeecccCcHHHHHHHHHHHhhC-CC----CCHH-H-HHHhhCCcHHHHHHHHHHHHHcCCccccCCcccccccccccC
Q psy4132 397 KVLQLKSCEDASFVEKTYEIVSQN-VF----VTVE-Q-FSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYENKFL 469 (473)
Q Consensus 397 ~vl~~~~~~~~~~~~~~~~~~~~~-~~----ls~~-e-~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~n~~~ 469 (473)
.|+ ...++++ +...++++++.. +. +|.. + +|+.++||+.+|+|.|+.||.+|.+|||++++|++||+|.|+
T Consensus 90 ~V~-~~~~~d~-~~~~il~~~~~~~g~d~~~vt~~~~~la~~~~ws~~~a~e~L~~~e~~G~l~~D~~~~G~~y~~N~f~ 167 (169)
T 1u5t_B 90 LCV-TSEKFDV-VKEKLVDLIGDNPGSDLLRLTQILSSNNSKSNWTLGILMEVLQNCVDEGDLLIDKQLSGIYYYKNSYW 167 (169)
T ss_dssp EEE-ESSCSHH-HHHHHHHHHHHSCSBCHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTSEEEEECSSCEEEEECCSS
T ss_pred EEE-eCCChhH-HHHHHHHHHHhcCCCCcccccHHHHHHHHHhCCCHHHHHHHHHHHHHcCCEEEECCCCcceEEeeecC
Confidence 988 5555554 677888888875 77 8999 9 999999999999999999999999999999999999999998
Q ss_pred c
Q psy4132 470 L 470 (473)
Q Consensus 470 ~ 470 (473)
.
T Consensus 168 ~ 168 (169)
T 1u5t_B 168 P 168 (169)
T ss_dssp C
T ss_pred c
Confidence 5
No 6
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.82 E-value=5.7e-20 Score=175.67 Aligned_cols=211 Identities=15% Similarity=0.232 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhh---h-hhhhcccccccccCCCCCceeHHHHHHHHccccc-
Q psy4132 164 ETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNK---I-INRQGEITEDDSNKDRDGKINFQEFCSIVGNTDI- 231 (473)
Q Consensus 164 ~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~---~-~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~- 231 (473)
.+..+++++|..+|+ ..++...|+.++..++.. . .....++. .+|.+++|.|+|+||+.++.....
T Consensus 13 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~--~~D~~~~g~i~~~Ef~~~~~~~~~~ 90 (263)
T 2f33_A 13 ITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVD--QYGQRDDGKIGIVELAHVLPTEENF 90 (263)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHH--HHTTGGGCCBCHHHHHHHTTSCTTH
T ss_pred ccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHH--HhCCCCCCcCcHHHHHHHHhhhhhH
Confidence 345679999999998 788889999998887741 0 12233333 379999999999999999863200
Q ss_pred ----cccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-c----cCC---HHHH----HHHHHhcCCCCCcccHHHHH
Q psy4132 232 ----HKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-L----QQN---PLVQ----RVIDIFDEDRNGEVDFKEFI 295 (473)
Q Consensus 232 ----~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~----~~~---~~~~----~l~~~~D~d~dG~I~~~EF~ 295 (473)
..........++.+|+.+|.+++|+|+.+||..+.. . +.. ..+. .++..+|.+++|.|+|+||+
T Consensus 91 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~ 170 (263)
T 2f33_A 91 LLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMA 170 (263)
T ss_dssp HHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHH
T ss_pred HHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHH
Confidence 002234567899999999999999999999998532 2 222 2333 49999999999999999999
Q ss_pred HHHhh-------cccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCC
Q psy4132 296 QGVSQ-------FSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLS 368 (473)
Q Consensus 296 ~~l~~-------~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls 368 (473)
.++.. ........+.+..+|+.||+|++|.++..|+..++..+.. .. + ..++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~---~~-----------------~-~~~~ 229 (263)
T 2f33_A 171 RLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCE---KN-----------------K-QELD 229 (263)
T ss_dssp HHSCTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHH---HC-----------------T-TTCC
T ss_pred HHHHHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHH---hc-----------------C-CCCC
Confidence 98864 2234566788999999999999977776444333332221 00 0 1377
Q ss_pred HHHHHHHHHH-hccCCCCCeeHHhhhccce
Q psy4132 369 PEDLLNSCLA-LDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 369 ~~ei~~~~~~-~D~~~dg~Is~~EF~~~~~ 397 (473)
++++..+++. +|.|+||.|+++||...+.
T Consensus 230 ~~e~~~~~~~~~D~d~dG~i~~~EF~~~~~ 259 (263)
T 2f33_A 230 INNISTYKKNIMALSDGGKLYRTDLALILS 259 (263)
T ss_dssp TTTHHHHHHHHHTTSBTTEECGGGTHHHHC
T ss_pred HHHHHHHHHHhhccCCCCeEcHHHHHHHHh
Confidence 7888888887 7999999999999987664
No 7
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.79 E-value=3.8e-19 Score=170.79 Aligned_cols=211 Identities=15% Similarity=0.219 Sum_probs=151.4
Q ss_pred HHHHHHHHHHhhhh-------hhhHHHHHH----HHhh--hhhhhhhhhhcccc--cccccCCCCCceeHHHHHHHHccc
Q psy4132 165 TSSNINNAFKDLNQ-------LMSMAKEMV----EISK--NISNKIINRQGEIT--EDDSNKDRDGKINFQEFCSIVGNT 229 (473)
Q Consensus 165 ~~~~l~eaF~~lD~-------~~e~~~~l~----~lg~--~~~~~~~~~~~~~~--~~~~D~d~dG~I~f~EF~~~~~~~ 229 (473)
+..+++++|..+|. ..++...|+ .+|. .++.. ++...+. ...+|.|++|.|+|+||+.++...
T Consensus 9 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~--~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~ 86 (272)
T 2be4_A 9 DAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDE--RVQQIKKSFMSAYDATFDGRLQIEELANMILPQ 86 (272)
T ss_dssp CHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHH--HHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSCH
T ss_pred CHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHH--HHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhhh
Confidence 34579999999998 688888888 8888 77765 4433221 134799999999999999985310
Q ss_pred -------cccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-c----cCC---HH----HHHHHHHhcCCCCCccc
Q psy4132 230 -------DIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-L----QQN---PL----VQRVIDIFDEDRNGEVD 290 (473)
Q Consensus 230 -------~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~----~~~---~~----~~~l~~~~D~d~dG~I~ 290 (473)
............++.+|+.+|.|++|.|+.+||..+.. . +.. .. +..++..+|.|++|.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~ 166 (272)
T 2be4_A 87 EENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLD 166 (272)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEE
T ss_pred hHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCc
Confidence 00011123457799999999999999999999998532 2 222 12 34599999999999999
Q ss_pred HHHHHHHHhhcc-----------cCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHH
Q psy4132 291 FKEFIQGVSQFS-----------VKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRIN 359 (473)
Q Consensus 291 ~~EF~~~l~~~~-----------~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~ 359 (473)
|+||+.++.... ......+.+..+|+.||+|++|.++..|+..++..+...
T Consensus 167 ~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~------------------ 228 (272)
T 2be4_A 167 LNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMEL------------------ 228 (272)
T ss_dssp HHHHGGGSCCSSCSSTTSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHH------------------
T ss_pred HHHHHHHHhhhHHHHhhhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHH------------------
Confidence 999998875410 011235679999999999999766664444333332210
Q ss_pred hhhCCCCCCHHHHHH----HHHHhccCCCCCeeHHhhhcccee
Q psy4132 360 RARGLELLSPEDLLN----SCLALDKLPDSPIYLKTYSSGVKV 398 (473)
Q Consensus 360 ~~~g~~~ls~~ei~~----~~~~~D~~~dg~Is~~EF~~~~~v 398 (473)
.+ ..++++++.. +|..+|.|+||.|+++||...+..
T Consensus 229 --~~-~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~~~~~~ 268 (272)
T 2be4_A 229 --VR-PSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLGL 268 (272)
T ss_dssp --HS-SSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHHHHTTC
T ss_pred --cC-CCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHcc
Confidence 01 1378888876 999999999999999999887753
No 8
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.77 E-value=1.9e-19 Score=178.43 Aligned_cols=188 Identities=16% Similarity=0.246 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKM 235 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~ 235 (473)
.+....++++|..+|+ ..++...|..+|..++.. ++..++. .+|.+++|.|+|.+|..++
T Consensus 118 ~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~--~i~~l~~--~~D~d~~G~I~f~ef~~l~--------- 184 (323)
T 1ij5_A 118 EEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEG--PLKKLFV--MVENDTKGRMSYITLVAVA--------- 184 (323)
T ss_dssp HHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSS--HHHHHHH--HHHHCCSSTHHHHHHTTSH---------
T ss_pred HHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHH--HHHHHHH--HhcCCCCCcCcHHHHHhhh---------
Confidence 4456789999999997 788889999999888766 5555554 3789999999999997654
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcchhccC---CHHHHH-HHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHH
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQ---NPLVQR-VIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKL 311 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~---~~~~~~-l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l 311 (473)
.....+..+|..+|.+++|+|+.+||..++ .+. ...+.. ++..+|.+++|.|+|.||+.++.... .+
T Consensus 185 -~~~~~l~~~F~~~D~d~dG~Is~~El~~~l-~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~-------~l 255 (323)
T 1ij5_A 185 -NDLAALVADFRKIDTNSNGTLSRKEFREHF-VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL-------VL 255 (323)
T ss_dssp -HHHHTSCCCHHHHCTTCCSEECHHHHHHHH-HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH-------HH
T ss_pred -hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH-------HH
Confidence 356678889999999999999999999965 432 345889 99999999999999999999998763 88
Q ss_pred HHHhHHhcCCCCchhhHhhHHHHHHHH-hchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHH
Q psy4132 312 KFAFRIYDIDNDDDYYQALGNELIAAL-IEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLK 390 (473)
Q Consensus 312 ~~~F~~~D~d~dg~~~~~e~~el~~~L-~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~ 390 (473)
..+|+.||.|++|.++. .++..++ .. .| ..++++++..+|..+|.|+||.|+++
T Consensus 256 ~~~F~~~D~d~dG~Is~---~El~~~l~~~---------------------~g-~~ls~~e~~~l~~~~D~d~dG~Is~~ 310 (323)
T 1ij5_A 256 RILYAFADFDKSGQLSK---EEVQKVLEDA---------------------HI-PESARKKFEHQFSVVDVDDSKSLSYQ 310 (323)
T ss_dssp HHHHHHTCSSSCSSEEH---HHHHHHHHHT---------------------TC-CGGGCSTHHHHHHHHTTTTCSEECHH
T ss_pred HHHHHHhCCCCCCCccH---HHHHHHHHHH---------------------cC-CCCCHHHHHHHHHHHCCCCCCcEeHH
Confidence 99999999999965555 3444444 21 12 13667779999999999999999999
Q ss_pred hhhccce
Q psy4132 391 TYSSGVK 397 (473)
Q Consensus 391 EF~~~~~ 397 (473)
||...+.
T Consensus 311 EF~~~~~ 317 (323)
T 1ij5_A 311 EFVMLVL 317 (323)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987664
No 9
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=99.75 E-value=5.2e-18 Score=148.45 Aligned_cols=138 Identities=23% Similarity=0.291 Sum_probs=114.2
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccCC---HHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHH
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQN---PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRES 309 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~~---~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e 309 (473)
.+..++++++++|+.+|.|++|+|+.+||..+. ..+.. ..+..++..+|.+++|.|+|.||+..+.........++
T Consensus 4 lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 83 (148)
T 2lmt_A 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEE 83 (148)
T ss_dssp CCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHH
Confidence 456788999999999999999999999999853 33333 35788999999999999999999999988877788889
Q ss_pred HHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeH
Q psy4132 310 KLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYL 389 (473)
Q Consensus 310 ~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~ 389 (473)
.++.+|+.||.|++|.++..|+ ..++.. . | ..++++++..+++.+|.|+||.|+|
T Consensus 84 ~l~~aF~~~D~d~~G~I~~~El---~~~l~~--------------------~-g-~~~~~~e~~~l~~~~D~d~dG~I~~ 138 (148)
T 2lmt_A 84 EMREAFKIFDRDGDGFISPAEL---RFVMIN--------------------L-G-EKVTDEEIDEMIREADFDGDGMINY 138 (148)
T ss_dssp HHHHHHHHHHSSCSSEECHHHH---HHHHHH--------------------H-T-CCCCHHHHHHHHHHHCCSCCSSEEH
T ss_pred HHHHHHHHHCCCCcCcCcHHHH---HHHHHH--------------------c-C-ccccHHHHHHHHHHhCCCCCCeEeH
Confidence 9999999999999966666433 333322 1 2 2488999999999999999999999
Q ss_pred Hhhhccc
Q psy4132 390 KTYSSGV 396 (473)
Q Consensus 390 ~EF~~~~ 396 (473)
+||+..+
T Consensus 139 ~EF~~~m 145 (148)
T 2lmt_A 139 EEFVWMI 145 (148)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998654
No 10
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.74 E-value=2.8e-17 Score=143.78 Aligned_cols=141 Identities=58% Similarity=0.828 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcchhccCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHh
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAF 315 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F 315 (473)
+.+.+.++.+|+.+|.|++|+|+.+||..+...+..+.+..++..+|.+++|.|+|+||+.++..........+.++.+|
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~l~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F 81 (155)
T 3ll8_B 2 ADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAF 81 (155)
T ss_dssp CHHHHHHHHHHHHHCTTCSSSBCHHHHTTSGGGTTCTTHHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCCeEcHHHHHHhhccccchHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHH
Confidence 35678999999999999999999999977888888889999999999999999999999999998877778889999999
Q ss_pred HHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHH----hccCCCCCeeHHh
Q psy4132 316 RIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLA----LDKLPDSPIYLKT 391 (473)
Q Consensus 316 ~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~----~D~~~dg~Is~~E 391 (473)
+.+|.|++|.++..++.. ++. ...| ..++++++..+++. +|.|+||.|+++|
T Consensus 82 ~~~D~d~~G~i~~~e~~~---~l~--------------------~~~~-~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~e 137 (155)
T 3ll8_B 82 RIYDMDKDGYISNGELFQ---VLK--------------------MMVG-NNLKDTQLQQIVDKTIINADKDGDGRISFEE 137 (155)
T ss_dssp HHHCTTCSSCBCHHHHHH---HHH--------------------HHHG-GGSCHHHHHHHHHHHHHHHCTTSSSSBCHHH
T ss_pred HHhCCCCCCcCcHHHHHH---HHH--------------------HHhc-cCCCHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence 999999996555543333 332 2112 13778888888877 9999999999999
Q ss_pred hhccceeee
Q psy4132 392 YSSGVKVLQ 400 (473)
Q Consensus 392 F~~~~~vl~ 400 (473)
|...+..+.
T Consensus 138 F~~~~~~~~ 146 (155)
T 3ll8_B 138 FCAVVGGLD 146 (155)
T ss_dssp HHHHHGGGC
T ss_pred HHHHHhccC
Confidence 998876543
No 11
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.73 E-value=8.9e-18 Score=145.89 Aligned_cols=136 Identities=18% Similarity=0.292 Sum_probs=108.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHH
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKL 311 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l 311 (473)
..+..+++.+|+.||.|++|+|+.+||..++ .++. ...+..++..+|.+++|.|+|+||+.++..........+.+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l 81 (143)
T 2obh_A 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEI 81 (143)
T ss_dssp HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHH
Confidence 3467889999999999999999999999853 3443 23578999999999999999999999987654444456789
Q ss_pred HHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHh
Q psy4132 312 KFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKT 391 (473)
Q Consensus 312 ~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~E 391 (473)
+.+|+.||+|++|.++.. ++..++. .. | ..++++++.++++.+|.|+||.|+++|
T Consensus 82 ~~~F~~~D~d~~G~I~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~~D~d~dG~I~~~e 136 (143)
T 2obh_A 82 LKAFKLFDDDETGKISFK---NLKRVAK--------------------EL-G-ENLTDEELQEMIDEADRDGDGEVSEQE 136 (143)
T ss_dssp HHHHHHHCTTCSSSBCHH---HHHHHHH--------------------HT-T-CCCCHHHHHHHHHHHCTTSSSSBCHHH
T ss_pred HHHHHHhCCCCCCcCcHH---HHHHHHH--------------------Hh-C-CCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence 999999999999655553 3333332 11 2 248899999999999999999999999
Q ss_pred hhccc
Q psy4132 392 YSSGV 396 (473)
Q Consensus 392 F~~~~ 396 (473)
|+..+
T Consensus 137 F~~~~ 141 (143)
T 2obh_A 137 FLRIM 141 (143)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98754
No 12
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.72 E-value=2.9e-17 Score=164.13 Aligned_cols=139 Identities=24% Similarity=0.348 Sum_probs=110.6
Q ss_pred ccchHHHHHHHHHHHhhCCCCCCCccHHHHhcc-hhccCC---HHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcH
Q psy4132 233 KKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSL-PELQQN---PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308 (473)
Q Consensus 233 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l-~~~~~~---~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~ 308 (473)
....+++++++++|+.||.|++|+|+.+||+.+ ..++.. ..++.++..+|.|++|.|+|+||+.++.........+
T Consensus 295 ~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~e 374 (440)
T 3u0k_A 295 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSE 374 (440)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------C
T ss_pred hhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChH
Confidence 445788999999999999999999999999985 344433 3588999999999999999999999998877777778
Q ss_pred HHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCee
Q psy4132 309 SKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIY 388 (473)
Q Consensus 309 e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is 388 (473)
+.++.+|+.||+|++|.++.+| |..+|.. . | ..++++++.++++.+|.|+||.|+
T Consensus 375 eeLreAFk~fDkDgdG~IS~eE---Lr~vL~~--------------------l-G-e~LSdeEIdeLfke~D~DgDGkIs 429 (440)
T 3u0k_A 375 EEIREAFRVFDKDGNGYISAAE---LRHVMTN--------------------L-G-EKLTDEEVDEMIREADIDGDGQVN 429 (440)
T ss_dssp HHHHHHHHHHCTTCSSEECHHH---HHHHHHH--------------------H-T-CCCCHHHHHHHHHHHCTTCSSSEE
T ss_pred HHHHHHHHHHCCCCcCcCCHHH---HHHHHHH--------------------h-C-CCCCHHHHHHHHHHhCCCCCCcEe
Confidence 8999999999999996666543 3333322 1 2 248999999999999999999999
Q ss_pred HHhhhccc
Q psy4132 389 LKTYSSGV 396 (473)
Q Consensus 389 ~~EF~~~~ 396 (473)
++||+..+
T Consensus 430 yeEFvkmM 437 (440)
T 3u0k_A 430 YEEFVQMM 437 (440)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998754
No 13
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.4e-17 Score=150.38 Aligned_cols=138 Identities=22% Similarity=0.323 Sum_probs=113.5
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccCC---HHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHH
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQN---PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRES 309 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~~---~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e 309 (473)
.+..++++++++|+.||.|++|+|+.+||..++ .++.. ..+..++..+|.+++|.|+|.||+.++.........++
T Consensus 5 Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~ 84 (176)
T 2lhi_A 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQ 84 (176)
T ss_dssp CCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHH
Confidence 345678899999999999999999999999853 44433 35788999999999999999999999988777777788
Q ss_pred HHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeH
Q psy4132 310 KLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYL 389 (473)
Q Consensus 310 ~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~ 389 (473)
.++.+|+.||+|++|.+.. .+|..+|.. . | ..++++++.++++.+| |+||.|+|
T Consensus 85 ~l~~aF~~fD~d~~G~I~~---~el~~~l~~--------------------~-g-~~~~~~ei~~l~~~~d-d~dG~I~~ 138 (176)
T 2lhi_A 85 ELLEAFKVFDKNGDGLISA---AELKHVLTS--------------------I-G-EKLTDAEVDDMLREVS-DGSGEINI 138 (176)
T ss_dssp HHHHHHHHHCSSCSSSBCH---HHHHHHHHT--------------------T-T-CCCCHHHHHHHHHHHH-TTSSCBCT
T ss_pred HHHHHHHHhCCCCCCcCcH---HHHHHHHHH--------------------c-C-cccchHHHHHHHHhhc-CCCCeEeH
Confidence 9999999999999965555 344444432 1 1 2589999999999999 99999999
Q ss_pred Hhhhccce
Q psy4132 390 KTYSSGVK 397 (473)
Q Consensus 390 ~EF~~~~~ 397 (473)
+||...++
T Consensus 139 ~EF~~~m~ 146 (176)
T 2lhi_A 139 QQFAALLS 146 (176)
T ss_dssp THHHHHHT
T ss_pred HHHHHHHH
Confidence 99998764
No 14
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.70 E-value=9.6e-17 Score=139.89 Aligned_cols=137 Identities=25% Similarity=0.345 Sum_probs=109.4
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHH
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESK 310 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~ 310 (473)
...+...++.+|..+|.+++|.|+.+||..++ .++. ...+..++..+|.+++|.|+|+||+.++..........+.
T Consensus 5 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~ 84 (148)
T 1exr_A 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEE 84 (148)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHH
Confidence 45677889999999999999999999999853 3332 2357889999999999999999999998765444455678
Q ss_pred HHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHH
Q psy4132 311 LKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLK 390 (473)
Q Consensus 311 l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~ 390 (473)
+..+|+.||+|++|.++.. ++..++. .. | ..++++++..+++.+|.|+||.|+++
T Consensus 85 l~~~F~~~D~d~~G~I~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~~d~d~dg~i~~~ 139 (148)
T 1exr_A 85 LIEAFKVFDRDGNGLISAA---ELRHVMT--------------------NL-G-EKLTDDEVDEMIREADIDGDGHINYE 139 (148)
T ss_dssp HHHHHHHHSTTCSSCBCHH---HHHHHHH--------------------HT-T-CCCCHHHHHHHHHHHCSSSSSSBCHH
T ss_pred HHHHHHHhCCCCCCcCCHH---HHHHHHH--------------------Hh-C-CCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence 9999999999999655553 3333332 21 2 24889999999999999999999999
Q ss_pred hhhccc
Q psy4132 391 TYSSGV 396 (473)
Q Consensus 391 EF~~~~ 396 (473)
||+..+
T Consensus 140 eF~~~~ 145 (148)
T 1exr_A 140 EFVRMM 145 (148)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998754
No 15
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=99.69 E-value=2.5e-16 Score=144.80 Aligned_cols=140 Identities=29% Similarity=0.454 Sum_probs=113.8
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcchhccCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhccc----------
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSV---------- 303 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~---------- 303 (473)
....+...++.+|..+|.|++|+|+.+||..+..++..+.+..++..+|.|++|.|+|+||+.++.....
T Consensus 23 ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~~~lg~~~~~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~ 102 (202)
T 2bec_A 23 FSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQD 102 (202)
T ss_dssp CCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTCHHHHHSTTHHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC---
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHhcCCCccHHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccc
Confidence 3456788999999999999999999999999854555556999999999999999999999999988754
Q ss_pred ------CCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHH
Q psy4132 304 ------KGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCL 377 (473)
Q Consensus 304 ------~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~ 377 (473)
.....+.++.+|+.||.|++|.+... |+..++. ...| ..++++++..++.
T Consensus 103 ~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~---El~~~l~--------------------~~~g-~~~~~~~~~~~~~ 158 (202)
T 2bec_A 103 PKKPEPLNSRRNKLHYAFQLYDLDRDGKISRH---EMLQVLR--------------------LMVG-VQVTEEQLENIAD 158 (202)
T ss_dssp --CCCCTTSHHHHHHHHHHHHCTTCSSEECHH---HHHHHHH--------------------HSCC-SCCCHHHHHHHHH
T ss_pred cccccccccHHHHHHHHHHHhCCCCCCeEcHH---HHHHHHH--------------------HhcC-CCCCHHHHHHHHH
Confidence 45667889999999999999555553 3333333 2212 1378888888887
Q ss_pred H----hccCCCCCeeHHhhhccce
Q psy4132 378 A----LDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 378 ~----~D~~~dg~Is~~EF~~~~~ 397 (473)
. +|.|+||.|+++||...+.
T Consensus 159 ~~~~~~D~d~dG~Is~~EF~~~~~ 182 (202)
T 2bec_A 159 RTVQEADEDGDGAVSFVEFTKSLE 182 (202)
T ss_dssp HHHHHHCSSCSSSEEHHHHHHTTT
T ss_pred HHHHHcCCCCCCcCcHHHHHHHHH
Confidence 7 9999999999999998775
No 16
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=99.68 E-value=3.6e-16 Score=144.55 Aligned_cols=155 Identities=32% Similarity=0.478 Sum_probs=120.3
Q ss_pred eeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchhccCCHHHHHHHHHhcCCCCCcccHHHHHH
Q psy4132 217 INFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQ 296 (473)
Q Consensus 217 I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~ 296 (473)
++.+++..+... ......+...++.+|..+|.|++|+|+.+||..+..++..+..++++..+|.+++|.|+|+||+.
T Consensus 9 l~~~~~~~l~~~---~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~~lg~~~~~~~l~~~~d~~~~g~i~~~EF~~ 85 (208)
T 2ct9_A 9 LRDEELEEIKKE---TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSEGEDQVNFRGFMR 85 (208)
T ss_dssp CCHHHHHHHHHH---HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCHHHHTSTTHHHHHHTTSCTTCSCEEHHHHHH
T ss_pred CCHHHHHHHHHc---CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHcCCCCcHHHHHHHHcCCCCCcCcHHHHHH
Confidence 445555544431 22456678899999999999999999999999987777777788999999999999999999999
Q ss_pred HHhhcccCC---------------CcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhh
Q psy4132 297 GVSQFSVKG---------------DRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRA 361 (473)
Q Consensus 297 ~l~~~~~~~---------------~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~ 361 (473)
++....... ...+.++.+|+.||.|++|.++.. |+..++. ..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~---El~~~l~--------------------~~ 142 (208)
T 2ct9_A 86 TLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRD---ELLQVLR--------------------MM 142 (208)
T ss_dssp HHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHH---HHHHHHH--------------------HH
T ss_pred HHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHH---HHHHHHH--------------------HH
Confidence 998764321 267889999999999999655553 3333333 22
Q ss_pred hCCCCCCHHHHHHH----HHHhccCCCCCeeHHhhhcccee
Q psy4132 362 RGLELLSPEDLLNS----CLALDKLPDSPIYLKTYSSGVKV 398 (473)
Q Consensus 362 ~g~~~ls~~ei~~~----~~~~D~~~dg~Is~~EF~~~~~v 398 (473)
.| ..++++++..+ ++.+|.|+||.|+++||...+..
T Consensus 143 ~g-~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~ 182 (208)
T 2ct9_A 143 VG-VNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK 182 (208)
T ss_dssp SC-TTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTT
T ss_pred hC-CCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 12 13788888777 99999999999999999987764
No 17
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.68 E-value=2.9e-16 Score=135.41 Aligned_cols=136 Identities=17% Similarity=0.283 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHH
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKL 311 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l 311 (473)
..+...++.+|+.+|.+++|.|+.+||..+. .++. ...+..++..+|.+++|.|+|+||+.++..........+.+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 81 (142)
T 2bl0_C 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDIL 81 (142)
T ss_dssp CHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHH
Confidence 3567889999999999999999999999953 3332 23588999999999999999999999998866667788999
Q ss_pred HHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHh
Q psy4132 312 KFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKT 391 (473)
Q Consensus 312 ~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~E 391 (473)
+.+|+.+|.|++|.++.. ++..++. .. | ..++++++..++..+| |++|.|+++|
T Consensus 82 ~~~F~~~D~d~~G~i~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~~d-~~dg~i~~~e 135 (142)
T 2bl0_C 82 RQAFRTFDPEGTGYIPKA---ALQDALL--------------------NL-G-DRLKPHEFAEFLGITE-TEKGQIRYDN 135 (142)
T ss_dssp HHHHHHTCCSSCSCEEHH---HHHHHHH--------------------HS-S-SCCCHHHHHHHHHHHC-CSSSEECSHH
T ss_pred HHHHHHHCCCCCCcCcHH---HHHHHHH--------------------Hc-C-CCCCHHHHHHHHHHhC-CCCCcEeHHH
Confidence 999999999999655553 3333333 21 2 1488999999999999 9999999999
Q ss_pred hhccce
Q psy4132 392 YSSGVK 397 (473)
Q Consensus 392 F~~~~~ 397 (473)
|...++
T Consensus 136 F~~~~~ 141 (142)
T 2bl0_C 136 FINTMF 141 (142)
T ss_dssp HHTTTC
T ss_pred HHHHHc
Confidence 987653
No 18
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=99.68 E-value=7.5e-17 Score=142.19 Aligned_cols=137 Identities=18% Similarity=0.249 Sum_probs=110.2
Q ss_pred ccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHH
Q psy4132 233 KKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKL 311 (473)
Q Consensus 233 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l 311 (473)
..+..++++++++|+.||.|++|+|+..||..++ .++..+. +..+..+..+++|.|+|.+|+.++.........++.+
T Consensus 9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~-~~~~~~~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l 87 (153)
T 3i5g_B 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPP-DDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDAL 87 (153)
T ss_dssp TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCC-HHHHHHHHHTSSSCCCSHHHHHTTTTTTTTCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCcc-HHHHHHHHHhccCCccHHHHHHHHHhhhcccccHHHH
Confidence 3567889999999999999999999999999954 4554443 3445556667889999999999998887777888999
Q ss_pred HHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHh
Q psy4132 312 KFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKT 391 (473)
Q Consensus 312 ~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~E 391 (473)
+.+|+.||+|++|.++. .+|..+|.. .| +.+|++++..+++.+|.+ ||.|+|+|
T Consensus 88 ~~aF~~fD~d~~G~I~~---~el~~~l~~---------------------~g-~~ls~~ei~~~~~~~D~~-dG~I~y~E 141 (153)
T 3i5g_B 88 RNAFSMFDEDGQGFIPE---DYLKDLLEN---------------------MG-DNFSKEEIKNVWKDAPLK-NKQFNYNK 141 (153)
T ss_dssp HHHHHTTCSSCSSCCCH---HHHHHHHHS---------------------SS-SCCCHHHHHHHHTTCCEE-TTEECHHH
T ss_pred HHHHhccccCCCCeEeH---HHHHHHHHH---------------------cC-CcCCHHHHHHHHHHhCCC-cCEEcHHH
Confidence 99999999999965555 344444432 12 258999999999999998 99999999
Q ss_pred hhccc
Q psy4132 392 YSSGV 396 (473)
Q Consensus 392 F~~~~ 396 (473)
|+..+
T Consensus 142 F~~~m 146 (153)
T 3i5g_B 142 MVDIK 146 (153)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98754
No 19
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.67 E-value=3.2e-16 Score=139.28 Aligned_cols=139 Identities=23% Similarity=0.313 Sum_probs=111.7
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHH
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRES 309 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e 309 (473)
....+...++.+|+.+|.|++|.|+.+||..+. .++. ...+..++..+|.+++|.|+|+||+.++..........+
T Consensus 22 l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 101 (169)
T 3qrx_A 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSRE 101 (169)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHH
Confidence 345677899999999999999999999999853 3332 345889999999999999999999999987655445567
Q ss_pred HHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeH
Q psy4132 310 KLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYL 389 (473)
Q Consensus 310 ~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~ 389 (473)
.+..+|+.+|.|++|.++.. |+..++. .. | ..++++++..+|+.+|.|+||.|++
T Consensus 102 ~~~~~F~~~D~d~~G~i~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~~D~~~dg~i~~ 156 (169)
T 3qrx_A 102 EILKAFRLFDDDNSGTITIK---DLRRVAK--------------------EL-G-ENLTEEELQEMIAEADRNDDNEIDE 156 (169)
T ss_dssp HHHHHHHHHCTTCSSSBCHH---HHHHHHH--------------------HT-T-CCCCHHHHHHHHHHHCCSSSSCBCH
T ss_pred HHHHHHHHhCCCCCCcCCHH---HHHHHHH--------------------Hc-C-CCCCHHHHHHHHHHhCCCCCCCEeH
Confidence 89999999999999655553 3333332 22 2 2589999999999999999999999
Q ss_pred Hhhhccce
Q psy4132 390 KTYSSGVK 397 (473)
Q Consensus 390 ~EF~~~~~ 397 (473)
+||...++
T Consensus 157 ~eF~~~~~ 164 (169)
T 3qrx_A 157 DEFIRIMK 164 (169)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 99988765
No 20
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.67 E-value=1.5e-16 Score=142.27 Aligned_cols=154 Identities=21% Similarity=0.354 Sum_probs=122.4
Q ss_pred HHHHHHHHHHhhhh-------hhhHHHHHHHHh-hhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccch
Q psy4132 165 TSSNINNAFKDLNQ-------LMSMAKEMVEIS-KNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMV 236 (473)
Q Consensus 165 ~~~~l~eaF~~lD~-------~~e~~~~l~~lg-~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~ 236 (473)
+..+++++|..+|+ ..++...|+.++ ..++.. +....+. .+|.|++|.|+|+||+.++.
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~--~~~~l~~--~~D~~~~g~i~~~ef~~~~~--------- 71 (172)
T 2znd_A 5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPV--TVRSIIS--MFDRENKAGVNFSEFTGVWK--------- 71 (172)
T ss_dssp -CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHH--HHHHHHH--HHCSSSSSEECHHHHHHHHH---------
T ss_pred chhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHH--HHHHHHH--HhCCCCCCcCCHHHHHHHHH---------
Confidence 34579999999998 566777777666 445544 4444444 37999999999999999876
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHH
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLK 312 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~ 312 (473)
....++.+|+.+|.+++|+|+.+||+.+. ..+ ....++.++..+|.|++|.|+|+||+.++... +.+.
T Consensus 72 -~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~ 143 (172)
T 2znd_A 72 -YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL-------QRLT 143 (172)
T ss_dssp -HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH-------HHHH
T ss_pred -HHHHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH-------HHHH
Confidence 35789999999999999999999999953 333 23458899999999999999999999999765 7899
Q ss_pred HHhHHhcCCCCchhhHhhHHHHHHHHhc
Q psy4132 313 FAFRIYDIDNDDDYYQALGNELIAALIE 340 (473)
Q Consensus 313 ~~F~~~D~d~dg~~~~~e~~el~~~L~~ 340 (473)
.+|+.+|.|++|.++.. +++++.++..
T Consensus 144 ~~F~~~D~d~dG~i~~~-~~ef~~~~~~ 170 (172)
T 2znd_A 144 DIFRRYDTDQDGWIQVS-YEQYLSMVFS 170 (172)
T ss_dssp HHHHHHCTTSSSCCCCC-HHHHHHHHHT
T ss_pred HHHHHhCCCCCCeEeee-HHHHHHHHHh
Confidence 99999999999666544 6777766653
No 21
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.67 E-value=6.2e-16 Score=142.55 Aligned_cols=163 Identities=23% Similarity=0.363 Sum_probs=118.0
Q ss_pred CCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCC--CCCCccHHHHhcchhc---cCCHHHHHHHHHhcCCC
Q psy4132 211 KDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLD--NSGALSIDEFMSLPEL---QQNPLVQRVIDIFDEDR 285 (473)
Q Consensus 211 ~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d--~~G~Is~~el~~l~~~---~~~~~~~~l~~~~D~d~ 285 (473)
+|+.|.++.+++..+... ......+...++.+|+.+|.| ++|.|+.+||..++.. .....++.+|..+|.++
T Consensus 11 ~~~~g~l~~~el~~l~~~---~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~f~~~D~d~ 87 (207)
T 2ehb_A 11 KNAMRPPGYEDPELLASV---TPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKR 87 (207)
T ss_dssp ----------CHHHHHHH---SSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHSCTTCCCHHHHHHHHHHCTTC
T ss_pred hccccccCHHHHHHHHHh---CCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhccccccHHHHHHHHHHhcCCC
Confidence 367788999998877652 234567788999999999999 9999999999986432 12345788999999999
Q ss_pred CCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCC
Q psy4132 286 NGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLE 365 (473)
Q Consensus 286 dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~ 365 (473)
+|.|+|.||+.++..........+.++.+|+.||.|++|.+... |+..++...+.. .| .
T Consensus 88 ~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~---E~~~~l~~~~~~-----------------~g-~ 146 (207)
T 2ehb_A 88 NGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIERE---ELKEMVVALLHE-----------------SE-L 146 (207)
T ss_dssp SSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHH---HHHHHHHHHHHH-----------------HT-C
T ss_pred CCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHH---HHHHHHHHHHHH-----------------cc-c
Confidence 99999999999998886666778899999999999999766664 444444322111 12 1
Q ss_pred CCCHHHHH----HHHHHhccCCCCCeeHHhhhccce
Q psy4132 366 LLSPEDLL----NSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 366 ~ls~~ei~----~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
.++++++. .+|+.+|.|+||.|+++||...+.
T Consensus 147 ~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 182 (207)
T 2ehb_A 147 VLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS 182 (207)
T ss_dssp CCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 36776654 456799999999999999987765
No 22
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.66 E-value=6.7e-16 Score=135.80 Aligned_cols=138 Identities=20% Similarity=0.247 Sum_probs=113.3
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHH
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRES 309 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e 309 (473)
....+...++.+|+.+|.+++|.|+.+||..+. .++ ....+..++..+|.+++|.|+|+||+.++..........+
T Consensus 17 l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 96 (161)
T 3fwb_A 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLD 96 (161)
T ss_dssp SCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHH
Confidence 456678899999999999999999999999853 333 2335889999999999999999999999988767777889
Q ss_pred HHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeH
Q psy4132 310 KLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYL 389 (473)
Q Consensus 310 ~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~ 389 (473)
.+..+|+.||.|++|.+... ++..++. .. | ..++++++..+++.+|.|++|.|++
T Consensus 97 ~~~~~F~~~D~d~~G~i~~~---el~~~l~--------------------~~-~-~~~~~~~~~~~~~~~d~~~~g~i~~ 151 (161)
T 3fwb_A 97 EIKRAFQLFDDDHTGKISIK---NLRRVAK--------------------EL-G-ETLTDEELRAMIEEFDLDGDGEINE 151 (161)
T ss_dssp HHHHHHHHHCTTCSSEECHH---HHHHHHH--------------------HT-T-CCCCHHHHHHHHHTTCSSSSSSEEH
T ss_pred HHHHHHHHHcCCCCCeEeHH---HHHHHHH--------------------Hh-C-CCCCHHHHHHHHHHhCCCCCCcCcH
Confidence 99999999999999655553 3333332 21 2 1488999999999999999999999
Q ss_pred Hhhhccc
Q psy4132 390 KTYSSGV 396 (473)
Q Consensus 390 ~EF~~~~ 396 (473)
+||...+
T Consensus 152 ~eF~~~~ 158 (161)
T 3fwb_A 152 NEFIAIC 158 (161)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998765
No 23
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=99.66 E-value=5.5e-16 Score=136.15 Aligned_cols=139 Identities=23% Similarity=0.315 Sum_probs=111.7
Q ss_pred cchHHHHHHHHHHHhhC-CCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCC---
Q psy4132 234 KMVVDIRRLGKRFRKLD-LDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKG--- 305 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D-~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~--- 305 (473)
....+...++.+|..+| .+++|+|+.+||..+. .++. ...+..++..+|.+++|.|+|+||+.++.......
T Consensus 7 l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~ 86 (158)
T 2jnf_A 7 LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNP 86 (158)
T ss_dssp SCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCT
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccch
Confidence 34567889999999999 9999999999999853 3332 23588999999999999999999999998775544
Q ss_pred -CcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCC
Q psy4132 306 -DRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPD 384 (473)
Q Consensus 306 -~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~d 384 (473)
...+.++.+|+.||.|++|.+... ++..++. .. | ..++++++..++..+|.|+|
T Consensus 87 ~~~~~~~~~~F~~~D~d~~G~I~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~~D~d~d 141 (158)
T 2jnf_A 87 EQMQQELREAFRLYDKEGNGYISTD---VMREILA--------------------EL-D-ETLSSEDLDAMIDEIDADGS 141 (158)
T ss_dssp TTTSSTHHHHHHHHCSSSSSSEEHH---HHHHHHH--------------------HH-C-TTCCHHHHHHHHHHHCSSCC
T ss_pred hhHHHHHHHHHHHhCCCCCCeEcHH---HHHHHHH--------------------Hh-C-CcCCHHHHHHHHHHhCCCCC
Confidence 567789999999999999655553 3333332 21 2 14789999999999999999
Q ss_pred CCeeHHhhhccce
Q psy4132 385 SPIYLKTYSSGVK 397 (473)
Q Consensus 385 g~Is~~EF~~~~~ 397 (473)
|.|+++||...+.
T Consensus 142 g~i~~~eF~~~~~ 154 (158)
T 2jnf_A 142 GTVDFEEFMGVMT 154 (158)
T ss_dssp SEECSHHHHHHTS
T ss_pred CcEeHHHHHHHHh
Confidence 9999999987653
No 24
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=99.65 E-value=3e-16 Score=139.27 Aligned_cols=139 Identities=17% Similarity=0.162 Sum_probs=106.7
Q ss_pred cchHHHHHHHHHHHhhCC--CCCCCccHHHHhcc-hhccCCHHHHHHHH--HhcCCCCCcccHHHHHHHHhhccc--CCC
Q psy4132 234 KMVVDIRRLGKRFRKLDL--DNSGALSIDEFMSL-PELQQNPLVQRVID--IFDEDRNGEVDFKEFIQGVSQFSV--KGD 306 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~--d~~G~Is~~el~~l-~~~~~~~~~~~l~~--~~D~d~dG~I~~~EF~~~l~~~~~--~~~ 306 (473)
.+..++++++++|..||. |++|+|+..||+.+ ..+|.++.-.++-. ..+.+++|.|+|+||+.++..... ...
T Consensus 3 Lt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~~d~~~~g~i~f~eFl~~~~~~~~~~~~~ 82 (159)
T 3i5g_C 3 LTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMSSKDTGT 82 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTCCSSTTSCEECHHHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHcccccCCCcccHHHHHHHHHHhhcccccc
Confidence 456788999999999995 89999999999995 45665554333322 246788999999999999876644 345
Q ss_pred cHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhcc--CCC
Q psy4132 307 RESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDK--LPD 384 (473)
Q Consensus 307 ~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~--~~d 384 (473)
..+.++.+|+.||+|++|.++.. +|..+|.. .| ..+|++++..+++.+|. |+|
T Consensus 83 ~~~~l~~aF~~fD~d~~G~I~~~---el~~~l~~---------------------~g-~~ls~~e~~~l~~~~D~~~d~d 137 (159)
T 3i5g_C 83 AADEFMEAFKTFDREGQGLISSA---EIRNVLKM---------------------LG-ERITEDQCNDIFTFCDIREDID 137 (159)
T ss_dssp CHHHHHHHHHHHCTTSSSEECHH---HHHHHHHH---------------------SS-SCCCHHHHHHHHHHTTCCCCSS
T ss_pred hHHHHHHHHHHHhcCCCCcCcHH---HHHHHHHH---------------------hC-CCCCHHHHHHHHHHhCcCCCCC
Confidence 67889999999999999666654 33333332 12 25899999999999995 889
Q ss_pred CCeeHHhhhccce
Q psy4132 385 SPIYLKTYSSGVK 397 (473)
Q Consensus 385 g~Is~~EF~~~~~ 397 (473)
|.|+|+||+..+.
T Consensus 138 G~I~~~EF~~~m~ 150 (159)
T 3i5g_C 138 GNIKYEDLMKKVM 150 (159)
T ss_dssp CCEEHHHHHHHHH
T ss_pred CeEeHHHHHHHHH
Confidence 9999999987664
No 25
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=99.65 E-value=5.4e-16 Score=137.55 Aligned_cols=134 Identities=13% Similarity=0.208 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHHhhhh---------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHcccccc
Q psy4132 162 QKETSSNINNAFKDLNQ---------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIH 232 (473)
Q Consensus 162 ~~~~~~~l~eaF~~lD~---------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~ 232 (473)
.+++..++++||..||. ..++...|++||.+++.. ++..++. .|.+++|.|+|+||+.++.... .
T Consensus 4 t~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~--el~~~~~---~d~~~~g~i~f~eFl~~~~~~~-~ 77 (159)
T 3i5g_C 4 TKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEA--QVHQHGG---TKKMGEKAYKLEEILPIYEEMS-S 77 (159)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHH--HHHTTTC---CSSTTSCEECHHHHHHHHHHHT-T
T ss_pred CHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHH--HHHHHHc---ccccCCCcccHHHHHHHHHHhh-c
Confidence 45566789999999983 789999999999999987 6666553 5778899999999999886321 1
Q ss_pred ccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcC--CCCCcccHHHHHHHHhhc
Q psy4132 233 KKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDE--DRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 233 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~--d~dG~I~~~EF~~~l~~~ 301 (473)
.......+.++.+|+.||++++|+|+.+||+.++ .++. ...++.+++.+|. |++|.|+|+||+.+|..-
T Consensus 78 ~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~ 152 (159)
T 3i5g_C 78 KDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp CCTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHHC
T ss_pred ccccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHCC
Confidence 2233456789999999999999999999999964 3442 3458899999985 889999999999988653
No 26
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.65 E-value=7.1e-16 Score=133.37 Aligned_cols=137 Identities=25% Similarity=0.328 Sum_probs=110.6
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHH
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRES 309 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e 309 (473)
....+...++.+|+.+|.+++|.|+.+||..+. .++ ....+..++..+|.+++|.|+|+||+.++..........+
T Consensus 5 l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 84 (147)
T 4ds7_A 5 LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQ 84 (147)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHH
Confidence 356678899999999999999999999999853 332 2335789999999999999999999999987655556678
Q ss_pred HHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeH
Q psy4132 310 KLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYL 389 (473)
Q Consensus 310 ~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~ 389 (473)
.+..+|+.+|.|++|.+... ++..++. .. | ..++++++..+++.+| |++|.|++
T Consensus 85 ~~~~~F~~~D~d~~G~i~~~---e~~~~l~--------------------~~-~-~~~~~~~~~~~~~~~d-~~dg~i~~ 138 (147)
T 4ds7_A 85 ELLEAFKVFDKNGDGLISAA---ELKHVLT--------------------SI-G-EKLTDAEVDEMLREVS-DGSGEINI 138 (147)
T ss_dssp HHHHHHHHHCTTCSSEECHH---HHHHHHH--------------------HT-T-CCCCHHHHHHHHHHHS-SSCSSEEH
T ss_pred HHHHHHHHhCCCCCCeECHH---HHHHHHH--------------------Hc-C-CCCCHHHHHHHHHHhc-CCCCcCcH
Confidence 89999999999999655553 3333332 21 2 1488999999999999 99999999
Q ss_pred Hhhhccc
Q psy4132 390 KTYSSGV 396 (473)
Q Consensus 390 ~EF~~~~ 396 (473)
+||...+
T Consensus 139 ~eF~~~l 145 (147)
T 4ds7_A 139 KQFAALL 145 (147)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9998765
No 27
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=99.65 E-value=6e-16 Score=133.54 Aligned_cols=136 Identities=13% Similarity=0.221 Sum_probs=107.6
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcc-hhccCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHH
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSL-PELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFA 314 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l-~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~ 314 (473)
..+...++.+|+.+|.|++|+|+.+||..+ ..++..+....+...+.. ++|.|+|+||+.++..........+.+..+
T Consensus 3 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~ 81 (143)
T 3j04_B 3 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE-APGPINFTMFLTMFGEKLNGTDPEDVIRNA 81 (143)
T ss_dssp HHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT-SSSCCCHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh-CCCCcCHHHHHHHHHHHhccCCcHHHHHHH
Confidence 457789999999999999999999999995 445544444444444444 899999999999999877777788999999
Q ss_pred hHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhc
Q psy4132 315 FRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSS 394 (473)
Q Consensus 315 F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~ 394 (473)
|+.||.|++|.++.. ++...+... | ..++++++..+++.+|.|+||.|+++||+.
T Consensus 82 F~~~D~d~~G~I~~~-----------------------El~~~l~~~-g-~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~ 136 (143)
T 3j04_B 82 FACFDEEASGFIHED-----------------------HLRELLTTM-G-DRFTDEEVDEMYREAPIDKKGNFNYVEFTR 136 (143)
T ss_dssp HTTSCSSSCCCCCTT-----------------------THHHHHHTS-S-SCCCHHHHHHHHHHTTCCSSSCCCSTHHHH
T ss_pred HHHHCCCCCCeEcHH-----------------------HHHHHHHHc-C-CCCCHHHHHHHHHHcCCCCCCcCcHHHHHH
Confidence 999999999555553 333333322 2 148899999999999999999999999987
Q ss_pred cce
Q psy4132 395 GVK 397 (473)
Q Consensus 395 ~~~ 397 (473)
.++
T Consensus 137 ~~~ 139 (143)
T 3j04_B 137 ILK 139 (143)
T ss_dssp HHH
T ss_pred HHh
Confidence 664
No 28
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.65 E-value=1.4e-15 Score=132.25 Aligned_cols=139 Identities=16% Similarity=0.239 Sum_probs=110.0
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCC---
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGD--- 306 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~--- 306 (473)
....+...++.+|+.+|.+++|.|+.+||..+. .++ ....+..++..+|.+++|.|+|+||+.++........
T Consensus 5 l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 84 (153)
T 3ox6_A 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADM 84 (153)
T ss_dssp CCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhcccccc
Confidence 356678899999999999999999999999853 332 2335789999999999999999999999976654443
Q ss_pred -cHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCC
Q psy4132 307 -RESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDS 385 (473)
Q Consensus 307 -~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg 385 (473)
..+.+..+|+.+|.|++|.++.. ++...+....|. .++++++..++..+|.|++|
T Consensus 85 ~~~~~~~~~F~~~D~d~~G~i~~~-----------------------el~~~l~~~~~~-~~~~~~~~~~~~~~d~~~dg 140 (153)
T 3ox6_A 85 IGVKELRDAFREFDTNGDGEISTS-----------------------ELREAMRALLGH-QVGHRDIEEIIRDVDLNGDG 140 (153)
T ss_dssp HCHHHHHHHHHHHCTTCSSSBCHH-----------------------HHHHHHHHHHSS-CCCHHHHHHHHHHHCSSSSS
T ss_pred ccHHHHHHHHHHhCCCCCCcCcHH-----------------------HHHHHHHHHhcC-CCCHHHHHHHHHHhCCCCCC
Confidence 25778999999999999555553 333333332232 48899999999999999999
Q ss_pred CeeHHhhhccc
Q psy4132 386 PIYLKTYSSGV 396 (473)
Q Consensus 386 ~Is~~EF~~~~ 396 (473)
.|+++||...+
T Consensus 141 ~i~~~eF~~~~ 151 (153)
T 3ox6_A 141 RVDFEEFVRMM 151 (153)
T ss_dssp SBCHHHHHHHT
T ss_pred eEeHHHHHHHH
Confidence 99999998765
No 29
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.64 E-value=6.7e-17 Score=181.11 Aligned_cols=208 Identities=17% Similarity=0.210 Sum_probs=133.7
Q ss_pred HHHHHHHHHhhhh------hhhHHHHHHHHhh--------hhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccc
Q psy4132 166 SSNINNAFKDLNQ------LMSMAKEMVEISK--------NISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDI 231 (473)
Q Consensus 166 ~~~l~eaF~~lD~------~~e~~~~l~~lg~--------~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~ 231 (473)
..+++++|..+|. ..++...|..++. .++.. +...++. .+|.|++|.|+|+||+.++.
T Consensus 533 ~~~l~~~F~~~D~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~--~~~~l~~--~~D~d~~G~I~~~EF~~~~~---- 604 (900)
T 1qxp_A 533 DDNFKTLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLE--SCRSMVN--LMDRDGNGKLGLVEFNILWN---- 604 (900)
T ss_dssp --------CCCCCSSSSCCCSCTTTTTCC---------CCCCCHH--HHHHHHH--HHCC--CCCCCSSSHHHHHH----
T ss_pred HHHHHHHHHHHcCCCCcCCHHHHHHHHHHhhcccccccCCCCCHH--HHHHHHH--HhCCCCCCcCCHHHHHHHHH----
Confidence 5679999998885 4555566666554 44444 4555554 37999999999999999987
Q ss_pred cccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCc
Q psy4132 232 HKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDR 307 (473)
Q Consensus 232 ~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~ 307 (473)
..+.++.+|+.+|.|++|+|+.+||+.++ .++ ....++.++..+| |++|.|+|+||+.++...
T Consensus 605 ------~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~------ 671 (900)
T 1qxp_A 605 ------RIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL------ 671 (900)
T ss_dssp ------HHHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHH------
T ss_pred ------HHHHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH------
Confidence 34789999999999999999999999854 222 3346889999999 999999999999998765
Q ss_pred HHHHHHHhHHhcCCCCchhhH--hhH----------------------------------HHHHHHHhchhhcCCCccch
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQ--ALG----------------------------------NELIAALIEPLTSAGGTMLL 351 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~--~e~----------------------------------~el~~~L~~~~~~~~g~i~l 351 (473)
+.+..+|+.+|.|++|.+.. .++ .++..+......+ +|.|+.
T Consensus 672 -~~l~~~F~~~D~d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~ 749 (900)
T 1qxp_A 672 -EILFKIFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSA 749 (900)
T ss_dssp -HHHHHHHHHSCSSCCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCH
T ss_pred -HHHHHHHHhhCCCCCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCH
Confidence 67888899999998865522 110 1122222222222 567777
Q ss_pred hHHHHHHHhhh------CCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccc
Q psy4132 352 TDAYCRINRAR------GLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGV 396 (473)
Q Consensus 352 ~d~~~~~~~~~------g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~ 396 (473)
.++...+.... +...++.+++..+++.+|.|+||.|+++||...+
T Consensus 750 ~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~ 800 (900)
T 1qxp_A 750 TELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW 800 (900)
T ss_dssp HHHTTTSCC----CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHH
T ss_pred HHHHHHHHHhcccccccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHH
Confidence 77766555432 0123566667777777777777777777765543
No 30
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.64 E-value=2e-15 Score=141.10 Aligned_cols=133 Identities=20% Similarity=0.176 Sum_probs=106.3
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHH
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRES 309 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e 309 (473)
....+.+.++++|+.+|.|++|.|+.+||..+. ..+. ...++.++..+|.|++|.|+|+||+.++... +
T Consensus 45 l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~-------~ 117 (220)
T 3sjs_A 45 IPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM-------E 117 (220)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------H
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------H
Confidence 446677889999999999999999999999953 3332 2358899999999999999999999998875 7
Q ss_pred HHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeH
Q psy4132 310 KLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYL 389 (473)
Q Consensus 310 ~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~ 389 (473)
.++.+|+.||+|++|.++.. |+..++. .. | ..++++++..+++.+| |+||.|++
T Consensus 118 ~l~~~F~~~D~d~~G~I~~~---El~~~l~--------------------~~-g-~~~~~~~~~~l~~~~d-d~dg~I~~ 171 (220)
T 3sjs_A 118 LAYNLFVMNARARSGTLEPH---EILPALQ--------------------QL-G-FYINQRTSLLLHRLFA-RGMAFCDL 171 (220)
T ss_dssp HHHHHHHHHCCSSTTEECHH---HHHHHHH--------------------HH-T-CCCCHHHHHHHHHHHC---CCSEEH
T ss_pred HHHHHHHHHCCCCCCCCcHH---HHHHHHH--------------------Hh-C-CCCCHHHHHHHHHHhc-CCCCcCcH
Confidence 79999999999999666654 3333332 21 2 1488999999999999 99999999
Q ss_pred Hhhhccceee
Q psy4132 390 KTYSSGVKVL 399 (473)
Q Consensus 390 ~EF~~~~~vl 399 (473)
+||+..+..+
T Consensus 172 ~eF~~~~~~l 181 (220)
T 3sjs_A 172 NCWIAICAFA 181 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887654
No 31
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.64 E-value=8e-16 Score=135.45 Aligned_cols=139 Identities=27% Similarity=0.319 Sum_probs=111.5
Q ss_pred cchHHHHHHHHHHHhhCCCC-CCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhccc---CC
Q psy4132 234 KMVVDIRRLGKRFRKLDLDN-SGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSV---KG 305 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~-~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~---~~ 305 (473)
....+...++.+|..+|.++ +|.|+.+||..+. .++. ...+..++..+|.|++|.|+|+||+.++..... ..
T Consensus 12 l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~ 91 (161)
T 1dtl_A 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91 (161)
T ss_dssp SCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccc
Confidence 34567889999999999999 9999999999953 3332 335889999999999999999999999988755 56
Q ss_pred CcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCC
Q psy4132 306 DRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDS 385 (473)
Q Consensus 306 ~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg 385 (473)
...+.+..+|+.+|.|++|.+.. +++..++.. . | ..++++++..+|..+|.|+||
T Consensus 92 ~~~~~~~~~F~~~D~d~~G~i~~---~El~~~l~~--------------------~-g-~~~~~~~~~~~~~~~D~d~dg 146 (161)
T 1dtl_A 92 KSEEELSDLFRMFDKNADGYIDL---EELKIMLQA--------------------T-G-ETITEDDIEELMKDGDKNNDG 146 (161)
T ss_dssp CHHHHHHHHHHHHCTTCSSEEEH---HHHGGGGTT--------------------C----CCCHHHHHHHHHHHCTTSSS
T ss_pred hHHHHHHHHHHHhCCCCCCcCcH---HHHHHHHHH--------------------h-C-CCCCHHHHHHHHHHhCCCCCC
Confidence 67788999999999999965555 344443332 1 1 148899999999999999999
Q ss_pred CeeHHhhhccce
Q psy4132 386 PIYLKTYSSGVK 397 (473)
Q Consensus 386 ~Is~~EF~~~~~ 397 (473)
.|+++||...+.
T Consensus 147 ~i~~~eF~~~~~ 158 (161)
T 1dtl_A 147 RIDYDEFLEFMK 158 (161)
T ss_dssp EEEHHHHHHHHH
T ss_pred cEeHHHHHHHHH
Confidence 999999987764
No 32
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=99.64 E-value=2e-15 Score=137.76 Aligned_cols=138 Identities=23% Similarity=0.309 Sum_probs=107.6
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc--CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHH
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ--QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKL 311 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~--~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l 311 (473)
...+...++.+|+.+|.|++|+|+.+||..++ .++ ....+..++..+|.|++|.|+|+||+.++.... ....+.+
T Consensus 47 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~--~~~~~~l 124 (191)
T 3k21_A 47 NDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIAAALDRK--QLSKKLI 124 (191)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCTTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG--GCCHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh--hccHHHH
Confidence 35677889999999999999999999999953 222 235688999999999999999999999886553 3567889
Q ss_pred HHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHH---HHHHHHHHhccCCCCCee
Q psy4132 312 KFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPE---DLLNSCLALDKLPDSPIY 388 (473)
Q Consensus 312 ~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~---ei~~~~~~~D~~~dg~Is 388 (473)
..+|+.||.|++|.++.. |+..++.. ......++++ ++..+|+.+|.|+||.|+
T Consensus 125 ~~~F~~~D~d~~G~Is~~---El~~~l~~--------------------~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is 181 (191)
T 3k21_A 125 YCAFRVFDVDNDGEITTA---ELAHILYN--------------------GNKKGNITQRDVNRVKRMIRDVDKNNDGKID 181 (191)
T ss_dssp HHHHHHHSTTCSSCBCHH---HHHHHHHH--------------------SSSCSCCCHHHHHHHHHHHHHHCSSSSSSBC
T ss_pred HHHHHHhCCCCCCcCCHH---HHHHHHHh--------------------cCCCCCCCHhHHHHHHHHHHHhcCCCCCeEC
Confidence 999999999999655553 44444432 1111135653 578899999999999999
Q ss_pred HHhhhccce
Q psy4132 389 LKTYSSGVK 397 (473)
Q Consensus 389 ~~EF~~~~~ 397 (473)
++||...++
T Consensus 182 ~~EF~~~~~ 190 (191)
T 3k21_A 182 FHEFSEMMK 190 (191)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHc
Confidence 999987654
No 33
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.64 E-value=4.5e-16 Score=140.48 Aligned_cols=130 Identities=19% Similarity=0.294 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccch
Q psy4132 164 ETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMV 236 (473)
Q Consensus 164 ~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~ 236 (473)
++..+|+++|..||+ ..++...|+.+|.+++.. ++..++.. +|.+++|.|+|.||+.++... ....
T Consensus 8 eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~--~~~~~~~~--~d~d~~~~i~~~ef~~~~~~~---~~~~ 80 (176)
T 2lhi_A 8 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEA--EVNDLMNE--IDVDGNHQIEFSEFLALMSRQ---LKSN 80 (176)
T ss_dssp TGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHH--HHHHHHTT--TCSSCSSSBCTTHHHHHHTSS---CCSS
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHH--HHHHHHHH--hCcCCCccchHHHHHHHHHHh---cccC
Confidence 344579999999999 789999999999999987 66666654 899999999999999988732 2334
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
...+.++.+|+.||.|++|+|+.+||+.++. .+ ....++.+++.+| |+||.|+|+||+.+|..-
T Consensus 81 ~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k~ 148 (176)
T 2lhi_A 81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSKG 148 (176)
T ss_dssp HHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTCC
T ss_pred CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHhc
Confidence 5667899999999999999999999999643 32 2345889999999 999999999999999765
No 34
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.63 E-value=6.1e-16 Score=147.53 Aligned_cols=197 Identities=14% Similarity=0.119 Sum_probs=132.8
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc---------CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc---
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ---------QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF--- 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~---------~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~--- 301 (473)
...+.++++.+|+.+|.|++|.|+.+||..++. ++ ....+..++..+|.+++|.|+|+||+.++...
T Consensus 11 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~~~ 90 (263)
T 2f33_A 11 SLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENF 90 (263)
T ss_dssp SCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCTTH
T ss_pred CcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhhhH
Confidence 345667899999999999999999999988532 21 12456789999999999999999999887643
Q ss_pred -----ccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHH---------------------hchhhcCCCccchhHHH
Q psy4132 302 -----SVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAAL---------------------IEPLTSAGGTMLLTDAY 355 (473)
Q Consensus 302 -----~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L---------------------~~~~~~~~g~i~l~d~~ 355 (473)
.......+.++.+|+.||.|++|.++..++..++..+ .....+.+|.|++.++.
T Consensus 91 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~ 170 (263)
T 2f33_A 91 LLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMA 170 (263)
T ss_dssp HHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHH
T ss_pred HHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHH
Confidence 1345567789999999999999877776665544332 11223455777887776
Q ss_pred HHHHh-------hhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccceeeeec---ccCcHHHHHHHHHH-H--hhCCC
Q psy4132 356 CRINR-------ARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVLQLK---SCEDASFVEKTYEI-V--SQNVF 422 (473)
Q Consensus 356 ~~~~~-------~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl~~~---~~~~~~~~~~~~~~-~--~~~~~ 422 (473)
..+.. ..+ ...+.+.+..+|+.+|+|++|.|+.+||...++.+... ..+++ -+..+++. . +..|.
T Consensus 171 ~~~~~~~~~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~-e~~~~~~~~~D~d~dG~ 248 (263)
T 2f33_A 171 RLLPVQENFLLKFQG-IKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDIN-NISTYKKNIMALSDGGK 248 (263)
T ss_dssp HHSCTTTCSHHHHHH-TCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTT-THHHHHHHHHTTSBTTE
T ss_pred HHHHHHHHHHHHhcC-cchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHH-HHHHHHHHhhccCCCCe
Confidence 66543 111 12556777788888888888888888887777644320 11222 22334433 2 23466
Q ss_pred CCHHHHHHhhC
Q psy4132 423 VTVEQFSRLAS 433 (473)
Q Consensus 423 ls~~e~a~~~~ 433 (473)
|+..||...+.
T Consensus 249 i~~~EF~~~~~ 259 (263)
T 2f33_A 249 LYRTDLALILS 259 (263)
T ss_dssp ECGGGTHHHHC
T ss_pred EcHHHHHHHHh
Confidence 88888877654
No 35
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.63 E-value=1.6e-15 Score=135.77 Aligned_cols=149 Identities=18% Similarity=0.330 Sum_probs=118.1
Q ss_pred HHHHHHHHHhhhh------hhhHHHHHHHH-h-------hhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccc
Q psy4132 166 SSNINNAFKDLNQ------LMSMAKEMVEI-S-------KNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDI 231 (473)
Q Consensus 166 ~~~l~eaF~~lD~------~~e~~~~l~~l-g-------~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~ 231 (473)
..+++++|..+|. ..++...|+.+ | ..++.. +...++. .+|.|++|.|+|+||+.++.
T Consensus 3 ~~~l~~~F~~~Dd~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~--~~~~l~~--~~D~~~~g~i~~~eF~~~~~---- 74 (173)
T 1alv_A 3 VRQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGID--TCRSMVA--VMDSDTTGKLGFEEFKYLWN---- 74 (173)
T ss_dssp HHHHHHHHHHHHGGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHH--HHHHHHH--HHCTTCSSSBCHHHHHHHHH----
T ss_pred hhHHHHHHHHHhCCCCCcCHHHHHHHHHHhhhcccccccCCCCHH--HHHHHHH--HHcCCCCCccCHHHHHHHHH----
Confidence 4568999998874 67778888887 6 444444 4444554 37999999999999999887
Q ss_pred cccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCc
Q psy4132 232 HKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDR 307 (473)
Q Consensus 232 ~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~ 307 (473)
....++.+|+.+|.+++|+|+.+||+.+. ..+. ...++.++..+| |++|.|+|+||+.++...
T Consensus 75 ------~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~------ 141 (173)
T 1alv_A 75 ------NIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRL------ 141 (173)
T ss_dssp ------HHHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHH------
T ss_pred ------HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH------
Confidence 35789999999999999999999999853 3332 245789999999 999999999999999865
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHH
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAA 337 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~ 337 (473)
+.+..+|+.+|+|++|.++.. +++++.+
T Consensus 142 -~~~~~~F~~~D~d~~G~i~~~-~~~~l~~ 169 (173)
T 1alv_A 142 -DAMFRAFKSLDKDGTGQIQVN-IQEWLQL 169 (173)
T ss_dssp -HHHHHHHHHHSSSCCSEEEEE-HHHHHHH
T ss_pred -HHHHHHHHHhCCCCCCeecHh-HHHHHHH
Confidence 789999999999999666554 5554433
No 36
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.63 E-value=1.4e-15 Score=136.48 Aligned_cols=140 Identities=24% Similarity=0.355 Sum_probs=111.4
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHH
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESK 310 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~ 310 (473)
...+...++.+|..+|.|++|.|+.+||..+. .++. ...+..++..+|.|++|.|+|+||+.++..........+.
T Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~ 85 (179)
T 2f2o_A 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 85 (179)
T ss_dssp CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHH
Confidence 34577889999999999999999999999953 3332 2357899999999999999999999998776444455678
Q ss_pred HHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHH
Q psy4132 311 LKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLK 390 (473)
Q Consensus 311 l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~ 390 (473)
+..+|+.||.|++|.++.. |+..++.. . | ..++++++..+|..+|.|+||.|+++
T Consensus 86 ~~~~F~~~D~d~~G~I~~~---E~~~~l~~--------------------~-g-~~~~~~~~~~~~~~~D~~~dg~i~~~ 140 (179)
T 2f2o_A 86 IREAFRVFDKDGNGYISAA---ELRHVMTN--------------------L-G-EKLTDEEVDEMIREADIDGDGQVNYE 140 (179)
T ss_dssp HHHHHHHHCTTCSSEECHH---HHHHHHHH--------------------C----CCCHHHHHHHHHHHCTTCSSSEEHH
T ss_pred HHHHHHHhCCCCCCcCcHH---HHHHHHHH--------------------h-C-CCCCHHHHHHHHHHcCCCCCCcCcHH
Confidence 9999999999999666553 33333332 1 1 14889999999999999999999999
Q ss_pred hhhccceee
Q psy4132 391 TYSSGVKVL 399 (473)
Q Consensus 391 EF~~~~~vl 399 (473)
||...+...
T Consensus 141 eF~~~~~~~ 149 (179)
T 2f2o_A 141 EFVQMMTAK 149 (179)
T ss_dssp HHHHHSCC-
T ss_pred HHHHHHHHc
Confidence 999888644
No 37
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.63 E-value=1.1e-15 Score=139.55 Aligned_cols=151 Identities=17% Similarity=0.294 Sum_probs=118.9
Q ss_pred HHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHH
Q psy4132 167 SNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDI 239 (473)
Q Consensus 167 ~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~ 239 (473)
.+++++|..+|+ ..++...|..++..++.. ++...+. .+|.|++|.|+|+||+.++. ..
T Consensus 27 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~--~~~~l~~--~~D~d~dG~I~~~EF~~~~~----------~~ 92 (191)
T 1y1x_A 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLA--TTEKLLH--MYDKNHSGEITFDEFKDLHH----------FI 92 (191)
T ss_dssp SCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHH--HHHHHHH--HHCTTCSSSBCHHHHHHHHH----------HH
T ss_pred HHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHH--HHHHHHH--HhCCCCCCeEcHHHHHHHHH----------HH
Confidence 358999999998 566777776555556555 4555544 37999999999999999876 34
Q ss_pred HHHHHHHHhhCCCCCCCccHHHHhcchh-cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHh
Q psy4132 240 RRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAF 315 (473)
Q Consensus 240 ~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F 315 (473)
..++.+|+.+|.|++|+|+.+||+.+.. .+ ....++.++..+|.|++|.|+|+||+.++... +.+..+|
T Consensus 93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-------~~~~~~F 165 (191)
T 1y1x_A 93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV-------CRVRNVF 165 (191)
T ss_dssp HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-------HHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH-------HHHHHHH
Confidence 6899999999999999999999999643 32 23458899999999999999999999999865 7889999
Q ss_pred HHhcCCCCchhhHhhHHHHHHHHh
Q psy4132 316 RIYDIDNDDDYYQALGNELIAALI 339 (473)
Q Consensus 316 ~~~D~d~dg~~~~~e~~el~~~L~ 339 (473)
+.+|.|++|.+ .-.++|++.++.
T Consensus 166 ~~~D~d~dG~i-~~~~~eF~~~~~ 188 (191)
T 1y1x_A 166 AFYDRERTGQV-TFTFDTFIGGSV 188 (191)
T ss_dssp HHHCTTCCSEE-EEEHHHHHHHHH
T ss_pred HHhCcCCCceE-EeeHHHHHHHHH
Confidence 99999999553 223355555543
No 38
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=99.62 E-value=1.4e-15 Score=140.12 Aligned_cols=146 Identities=19% Similarity=0.203 Sum_probs=127.4
Q ss_pred chhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCC--CCCCHHHHHHHHHHhccCCCCCeeHHhhhccceeeee
Q psy4132 324 DDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGL--ELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVLQL 401 (473)
Q Consensus 324 g~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~--~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl~~ 401 (473)
|-|..++..++.+++......+||+|++.|+++.+++++|. +.+|++|+..+++.+..-|+| +....|- +.++++.
T Consensus 70 gdfy~eLavqIvEvC~~tr~~nGGli~L~el~~~~~r~Rg~~~~~IS~dDi~rAik~L~~LG~g-~~v~~~~-g~~~VqS 147 (234)
T 3cuq_A 70 GDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTG-FGIIPVG-GTYLIQS 147 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSEEEHHHHHHHHHHTTTTCCSSCCHHHHHHHHHHHGGGBTT-CEEEEET-TEEEEEC
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCeeEHHHHHHHHHHhcCCccCccCHHHHHHHHHHHHhcCCC-eEEEEEC-CEEEEEe
Confidence 46777778999999999888999999999999999999997 789999999999999988765 6666665 7778887
Q ss_pred cccCcHHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCc--ccccccccccCcc
Q psy4132 402 KSCEDASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSI--EGLRFYENKFLLE 471 (473)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~--~g~~~~~n~~~~~ 471 (473)
.+......-..++++++..+++|..+++..++|+...|++.|+.++..|.+|||++. ++.+||||.|.+.
T Consensus 148 vp~el~~D~~~vLela~~~g~vt~~~L~~~l~W~~~Ra~~~L~~l~~~GllwvD~q~~ge~~Yw~P~lf~~~ 219 (234)
T 3cuq_A 148 VPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFTDL 219 (234)
T ss_dssp SCCCCCHHHHHHHHHHTTTSEECHHHHHHHHTCCHHHHHHHHHHHHHHTSCEEESSSSSSCEEECTTSSCCC
T ss_pred CCCccchHHHHHHHHHHhcCcCcHHHHHHHhCCCHHHHHHHHHHHHhCCCEEEeCCCCCcceeecchhhccc
Confidence 776555556678888888899999999999999999999999999999999999987 4567899999753
No 39
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.62 E-value=1.2e-15 Score=142.61 Aligned_cols=156 Identities=12% Similarity=0.103 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKM 235 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~ 235 (473)
.+....++++|..+|+ ..++...|+.+|..++.. +...++. .+|.|++|.|+|+||+.++.
T Consensus 47 ~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~--~~~~l~~--~~D~d~dg~I~~~EF~~~~~-------- 114 (220)
T 3sjs_A 47 LDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQ--TALRMMR--IFDTDFNGHISFYEFMAMYK-------- 114 (220)
T ss_dssp HHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHH--HHHHHHH--HHCTTCSSCBCHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHH--HHHHHHH--HhCCCCCCcCCHHHHHHHHH--------
Confidence 4455678999999998 677777777888777766 5555554 37999999999999999887
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHH
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKL 311 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l 311 (473)
....+..+|+.+|.|++|+|+.+||+.+. ..+ ....++.+++.+| |++|.|+|+||+.++..+ ..+
T Consensus 115 --~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l-------~~~ 184 (220)
T 3sjs_A 115 --FMELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFA-------AQT 184 (220)
T ss_dssp --HHHHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHH-------HHH
T ss_pred --HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH-------HHH
Confidence 24779999999999999999999999963 333 2335889999999 999999999999999877 578
Q ss_pred HHHhHHh-cCCCCc---hhhHhhHHHHHHHHhc
Q psy4132 312 KFAFRIY-DIDNDD---DYYQALGNELIAALIE 340 (473)
Q Consensus 312 ~~~F~~~-D~d~dg---~~~~~e~~el~~~L~~ 340 (473)
+.+|+.+ |.+++| .++.-.+++++.++..
T Consensus 185 ~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~ 217 (220)
T 3sjs_A 185 RSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS 217 (220)
T ss_dssp HHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence 9999999 999996 2223334666666553
No 40
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.62 E-value=4.7e-15 Score=132.32 Aligned_cols=138 Identities=20% Similarity=0.279 Sum_probs=108.3
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhc----c-hhccC---CHHHH-----------HHHHHhcCCCCCcccHHHHHH
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMS----L-PELQQ---NPLVQ-----------RVIDIFDEDRNGEVDFKEFIQ 296 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~----l-~~~~~---~~~~~-----------~l~~~~D~d~dG~I~~~EF~~ 296 (473)
..+.+.++.+|+.+|.|++|+|+.+||.. + ..++. ...+. .++..+|.|++|.|+|+||+.
T Consensus 3 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~ 82 (176)
T 1nya_A 3 AIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIR 82 (176)
T ss_dssp SHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 45678999999999999999999999998 3 22332 22333 789999999999999999999
Q ss_pred HHhhcccCCCc-------HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCH
Q psy4132 297 GVSQFSVKGDR-------ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSP 369 (473)
Q Consensus 297 ~l~~~~~~~~~-------~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~ 369 (473)
++......... .+.++.+|+.+|.|++|.+... ++..++ ... | +++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~---e~~~~l--------------------~~~-g---~~~ 135 (176)
T 1nya_A 83 VTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINAD---EFAAWL--------------------TAL-G---MSK 135 (176)
T ss_dssp HHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHH---HHHHHH--------------------HHT-T---CCH
T ss_pred HHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHH---HHHHHH--------------------HHh-C---CCH
Confidence 99877555443 4668999999999999555553 333333 222 2 678
Q ss_pred HHHHHHHHHhccCCCCCeeHHhhhccceeee
Q psy4132 370 EDLLNSCLALDKLPDSPIYLKTYSSGVKVLQ 400 (473)
Q Consensus 370 ~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl~ 400 (473)
+++..+|+.+|.|+||.|+++||...+..+.
T Consensus 136 ~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~ 166 (176)
T 1nya_A 136 AEAAEAFNQVDTNGNGELSLDELLTAVRDFH 166 (176)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHSCCS
T ss_pred HHHHHHHHHhCCCCCCCCcHHHHHHHHHHHh
Confidence 8999999999999999999999998876443
No 41
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.62 E-value=4.2e-15 Score=132.79 Aligned_cols=150 Identities=24% Similarity=0.278 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc----CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHH
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ----QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKL 311 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~----~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l 311 (473)
....+++.+|+.+|.|++|+|+.+||..+. ..+ ....+..++..+|.+++|.|+|+||+.++... +.+
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~-------~~~ 76 (172)
T 2znd_A 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI-------TDW 76 (172)
T ss_dssp --CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH-------HHH
T ss_pred cchhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHH
Confidence 355789999999999999999999999954 333 22357899999999999999999999988754 679
Q ss_pred HHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHh
Q psy4132 312 KFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKT 391 (473)
Q Consensus 312 ~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~E 391 (473)
+.+|+.+|.|++|.+... ++..++. .. | ..++++++..+++.+|.|+||.|+++|
T Consensus 77 ~~~F~~~D~d~~G~i~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~~d~~~dg~i~~~e 131 (172)
T 2znd_A 77 QNVFRTYDRDNSGMIDKN---ELKQALS--------------------GF-G-YRLSDQFHDILIRKFDRQGRGQIAFDD 131 (172)
T ss_dssp HHHHHHHCTTCSSEECHH---HHHHHHH--------------------HT-T-CCCCHHHHHHHHHHHCTTCSSSEEHHH
T ss_pred HHHHHHHCCCCCCccCHH---HHHHHHH--------------------Hc-C-CCCCHHHHHHHHHHhCCCCCCcCcHHH
Confidence 999999999999655553 3333332 21 2 147888999999999999999999999
Q ss_pred hhccceeeeecccCcHHHHHHHHHHHhh--CCCCCHH
Q psy4132 392 YSSGVKVLQLKSCEDASFVEKTYEIVSQ--NVFVTVE 426 (473)
Q Consensus 392 F~~~~~vl~~~~~~~~~~~~~~~~~~~~--~~~ls~~ 426 (473)
|...+..+ ..+..+++.++. .|.||..
T Consensus 132 F~~~~~~~--------~~~~~~F~~~D~d~dG~i~~~ 160 (172)
T 2znd_A 132 FIQGCIVL--------QRLTDIFRRYDTDQDGWIQVS 160 (172)
T ss_dssp HHHHHHHH--------HHHHHHHHHHCTTSSSCCCCC
T ss_pred HHHHHHHH--------HHHHHHHHHhCCCCCCeEeee
Confidence 98876532 344556666654 3567643
No 42
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=99.62 E-value=5.1e-15 Score=128.20 Aligned_cols=136 Identities=13% Similarity=0.220 Sum_probs=108.4
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHh---cCCCCCcccHHHHHHHHhhc--ccCC
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIF---DEDRNGEVDFKEFIQGVSQF--SVKG 305 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~---D~d~dG~I~~~EF~~~l~~~--~~~~ 305 (473)
+..+...++.+|..+|.+++|+|+.+||..+. .++. ...+..++..+ |.++ |.|+|+||+.++... ....
T Consensus 3 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~ 81 (149)
T 2mys_C 3 SKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQ 81 (149)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCc
Confidence 34677889999999999999999999999853 3332 33578899999 9999 999999999999876 4555
Q ss_pred CcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCC
Q psy4132 306 DRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDS 385 (473)
Q Consensus 306 ~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg 385 (473)
...+.+..+|+.||.|++|.+... ++..++. .. | ..++++++..++.. |.|++|
T Consensus 82 ~~~~~~~~~F~~~D~d~~G~i~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~-d~~~dg 135 (149)
T 2mys_C 82 GTFEDFVEGLRVFDKEGNGTVMGA---ELRHVLA--------------------TL-G-EKMTEEEVEELMKG-QEDSNG 135 (149)
T ss_pred chHHHHHHHHHHhCCCCCceEcHH---HHHHHHH--------------------Hh-C-CCCCHHHHHHHHhh-CCCCCC
Confidence 677889999999999999655553 3333332 21 2 14889999999999 999999
Q ss_pred CeeHHhhhccce
Q psy4132 386 PIYLKTYSSGVK 397 (473)
Q Consensus 386 ~Is~~EF~~~~~ 397 (473)
.|+++||...+.
T Consensus 136 ~i~~~eF~~~~~ 147 (149)
T 2mys_C 136 CINYEAFVKHIM 147 (149)
T ss_pred cEeHHHHHHHHh
Confidence 999999987653
No 43
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=99.61 E-value=1.7e-15 Score=133.35 Aligned_cols=139 Identities=25% Similarity=0.318 Sum_probs=110.1
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCC---
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGD--- 306 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~--- 306 (473)
....+...++.+|..+|.+++|.|+..||..+. .++ ....+..++..+|.+++|.|+|+||+.++........
T Consensus 14 ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 93 (162)
T 1top_A 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGK 93 (162)
T ss_dssp SCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccc
Confidence 456678899999999999999999999999953 333 2335789999999999999999999999876543322
Q ss_pred cHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 307 RESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 307 ~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
..+.++.+|+.+|.|++|.+.. +++..++. .. | ..++++++..+|..+|.|+||.
T Consensus 94 ~~~~~~~~F~~~D~d~~G~I~~---~e~~~~l~--------------------~~-g-~~~~~~~~~~~~~~~d~~~dg~ 148 (162)
T 1top_A 94 SEEELANCFRIFDKNADGFIDI---EELGEILR--------------------AT-G-EHVTEEDIEDLMKDSDKNNDGR 148 (162)
T ss_dssp HHHHHHHHHHHHCTTCSSCBCH---HHHHHHHH--------------------TT-T-CCCCHHHHHHHHHHHCTTCSSS
T ss_pred cHHHHHHHHHHhCCCCCCcCcH---HHHHHHHH--------------------Hh-C-CCCCHHHHHHHHHHhCCCCCCc
Confidence 5677899999999999955555 33333333 22 2 2488999999999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+++||...+.
T Consensus 149 i~~~eF~~~~~ 159 (162)
T 1top_A 149 IDFDEFLKMME 159 (162)
T ss_dssp BCHHHHHHHHH
T ss_pred CcHHHHHHHHh
Confidence 99999987764
No 44
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=99.61 E-value=3.6e-15 Score=134.66 Aligned_cols=144 Identities=24% Similarity=0.371 Sum_probs=114.3
Q ss_pred cchHHHHHHHHHHHhhCC-----CC-C--CCccHHHHhcchhccCCHHHHHHHHHhcCCCCCc-ccHHHHHHHHhhcccC
Q psy4132 234 KMVVDIRRLGKRFRKLDL-----DN-S--GALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGE-VDFKEFIQGVSQFSVK 304 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~-----d~-~--G~Is~~el~~l~~~~~~~~~~~l~~~~D~d~dG~-I~~~EF~~~l~~~~~~ 304 (473)
....+...++.+|..+|. ++ + |.|+.+||..+..++..+...+++..+|.+++|. |+|+||+.++......
T Consensus 14 ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~l~~~g~~~~~~~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~ 93 (183)
T 1dgu_A 14 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDT 93 (183)
T ss_dssp CCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHTSTTSSSCTTHHHHHHHHSCSSSSCCCCHHHHHHHHHHHSTT
T ss_pred CCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHHHHhhhcCcHHHHHHHHhCCCCCCCEecHHHHHHHHHHhcCC
Confidence 345678889999999999 68 8 9999999999666777778889999999999999 9999999999887666
Q ss_pred CCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHH----HHHHhc
Q psy4132 305 GDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLN----SCLALD 380 (473)
Q Consensus 305 ~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~----~~~~~D 380 (473)
....+.++.+|+.||.|++|.+...|+..++..+... . ....++++++.. +|..+|
T Consensus 94 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~~D 153 (183)
T 1dgu_A 94 ATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGE---G-----------------EDTRLSASEMKQLIDNILEESD 153 (183)
T ss_dssp CCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSS---S-----------------CCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcc---c-----------------ccCCCCHHHHHHHHHHHHHHhC
Confidence 6667899999999999999777765444444333210 0 001255666665 899999
Q ss_pred cCCCCCeeHHhhhccce
Q psy4132 381 KLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 381 ~~~dg~Is~~EF~~~~~ 397 (473)
.|+||.|+++||...+.
T Consensus 154 ~d~dG~I~~~EF~~~~~ 170 (183)
T 1dgu_A 154 IDRDGTINLSEFQHVIS 170 (183)
T ss_dssp TTSSSEEEHHHHHHHHC
T ss_pred CCCCCeEcHHHHHHHHH
Confidence 99999999999987665
No 45
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=99.61 E-value=4.2e-15 Score=135.18 Aligned_cols=138 Identities=18% Similarity=0.234 Sum_probs=102.1
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHh-----cc-hhccCCH--------HHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFM-----SL-PELQQNP--------LVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~-----~l-~~~~~~~--------~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
...+...++.+|+.+|.|++|+|+.+||. .+ ..++..+ .+..++..+|.|++|.|+|+||+.++..
T Consensus 15 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~ 94 (195)
T 1qv0_A 15 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQ 94 (195)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHH
Confidence 56778899999999999999999999998 43 3444433 3677999999999999999999998876
Q ss_pred cccC------CCcHHHHH----HHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHH
Q psy4132 301 FSVK------GDRESKLK----FAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPE 370 (473)
Q Consensus 301 ~~~~------~~~~e~l~----~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ 370 (473)
.... ....+.++ .+|+.||.|++|.++..|+.. ++ ... | ..++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~---~l--------------------~~~-g-~~~~~~ 149 (195)
T 1qv0_A 95 LATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA---YG--------------------KIS-G-ISPSQE 149 (195)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHH---HH--------------------HHH-S-SCCCHH
T ss_pred HHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHH---HH--------------------HHh-C-CCCCHH
Confidence 5321 11222343 899999999996555533333 33 222 2 147899
Q ss_pred HHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 371 DLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 371 ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
++..+|+.+|.|+||.|+++||...+.
T Consensus 150 ~~~~~~~~~D~d~dg~i~~~eF~~~~~ 176 (195)
T 1qv0_A 150 DCEATFRHCDLDNAGDLDVDEMTRQHL 176 (195)
T ss_dssp HHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 999999999999999999999998776
No 46
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=99.61 E-value=2.5e-16 Score=136.77 Aligned_cols=131 Identities=16% Similarity=0.196 Sum_probs=102.5
Q ss_pred HHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHh-cCCCCCcccHHHHHHHHhhc--c---cCCCcHHH
Q psy4132 241 RLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIF-DEDRNGEVDFKEFIQGVSQF--S---VKGDRESK 310 (473)
Q Consensus 241 ~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~-D~d~dG~I~~~EF~~~l~~~--~---~~~~~~e~ 310 (473)
.++.+|..+|.|++|+|+.+||..++ .++. ...+..++..+ |.+++|.|+|.||+.++... . ......+.
T Consensus 5 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~ 84 (148)
T 1m45_A 5 ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTED 84 (148)
T ss_dssp CCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHH
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHH
Confidence 46778999999999999999999853 3332 23588999999 99999999999999999877 3 45667788
Q ss_pred HHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHH
Q psy4132 311 LKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLK 390 (473)
Q Consensus 311 l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~ 390 (473)
++.+|+.||.|++|.++.. ++..++. .. | ..++++++..+++.+|.|+||.|+++
T Consensus 85 ~~~~F~~~D~d~~G~I~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~~d~d~dg~i~~~ 139 (148)
T 1m45_A 85 FVKAFQVFDKESTGKVSVG---DLRYMLT--------------------GL-G-EKLTDAEVDELLKGVEVDSNGEIDYK 139 (148)
T ss_dssp HHHHHHTTCSSSSSEEEHH---HHHHHHH--------------------HS-T-TCCCHHHHHHHHTTCCCCTTSEEEHH
T ss_pred HHHHHHHhCCCCCCcCCHH---HHHHHHH--------------------Hc-C-CCCCHHHHHHHHHHhCCCCCCeEeHH
Confidence 9999999999999655553 3333333 21 2 14889999999999999999999999
Q ss_pred hhhccc
Q psy4132 391 TYSSGV 396 (473)
Q Consensus 391 EF~~~~ 396 (473)
||...+
T Consensus 140 eF~~~~ 145 (148)
T 1m45_A 140 KFIEDV 145 (148)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998765
No 47
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.61 E-value=9.7e-16 Score=171.71 Aligned_cols=143 Identities=17% Similarity=0.239 Sum_probs=91.7
Q ss_pred HHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHH
Q psy4132 167 SNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDI 239 (473)
Q Consensus 167 ~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~ 239 (473)
..++++|+.+|+ ..++...|..+|..++.. +...++.. +| |++|.|+|+||+.++.. .
T Consensus 607 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~--~~~~l~~~--~d-d~dg~I~~~eF~~~~~~----------~ 671 (900)
T 1qxp_A 607 RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQ--LHQVIVAR--FA-DDELIIDFDNFVRCLVR----------L 671 (900)
T ss_dssp HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHH--HHHHHHHH--TS-CSSSBCCHHHHHHHHHH----------H
T ss_pred HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHH--HHHHHHHH--hC-CCCCeEcHHHHHHHHHH----------H
Confidence 679999999998 788888999999888776 56656554 68 89999999999988762 2
Q ss_pred HHHHHHHHhhCCCC----------------------------------------------------------CCCccHHH
Q psy4132 240 RRLGKRFRKLDLDN----------------------------------------------------------SGALSIDE 261 (473)
Q Consensus 240 ~~l~~~F~~~D~d~----------------------------------------------------------~G~Is~~e 261 (473)
..+..+|+.+|.++ +|.|+.+|
T Consensus 672 ~~l~~~F~~~D~d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~G~Is~~E 751 (900)
T 1qxp_A 672 EILFKIFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGDDMEVSATE 751 (900)
T ss_dssp HHHHHHHHHSCSSCCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTCSSCBCHHH
T ss_pred HHHHHHHHhhCCCCCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCCCCccCHHH
Confidence 34444444444444 45556667
Q ss_pred Hhcchhc-c-----------CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHh
Q psy4132 262 FMSLPEL-Q-----------QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQA 329 (473)
Q Consensus 262 l~~l~~~-~-----------~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~ 329 (473)
|+.++.. + ....++.+++.+|.|++|.|+|+||+.++... ..++.+|+.||.|++|.+...
T Consensus 752 l~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~~-------~~l~~~F~~~D~d~dG~Is~~ 824 (900)
T 1qxp_A 752 LMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI-------KKWQGIYKRFETDRSGTIGSN 824 (900)
T ss_dssp HTTTSCC----CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHHH-------HHHSSCC----CCSCC-----
T ss_pred HHHHHHHhcccccccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHHH-------HHHHHHHHHhCCCCCCccCHH
Confidence 7664322 1 11346677777777777777777777776554 356667777777777655554
Q ss_pred hH
Q psy4132 330 LG 331 (473)
Q Consensus 330 e~ 331 (473)
|+
T Consensus 825 El 826 (900)
T 1qxp_A 825 EL 826 (900)
T ss_dssp --
T ss_pred HH
Confidence 33
No 48
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.61 E-value=2.7e-15 Score=130.07 Aligned_cols=129 Identities=24% Similarity=0.377 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccch
Q psy4132 164 ETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMV 236 (473)
Q Consensus 164 ~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~ 236 (473)
++..+++++|..||+ ..++...|+++|..++.. ++..++.. +|.+++|.|+|+||+.++.... ...
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~--~~~~~~~~--~d~~~~g~i~~~eF~~~~~~~~---~~~ 75 (143)
T 2obh_A 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKE--EIKKMISE--IDKEGTGKMNFGDFLTVMTQKM---SEK 75 (143)
T ss_dssp HHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHH--HHHHHHHH--HTTTCCSEEEHHHHHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHH--HHHHHHHH--hCCCCCCeeeHHHHHHHHHHHh---ccc
Confidence 345679999999998 789999999999988877 66666653 7999999999999999876211 122
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
.....++.+|+.||.|++|+|+.+||+.+. .++ ....++.++..+|.|++|.|+|+||+.++.
T Consensus 76 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 76 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred cHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 345789999999999999999999999964 333 234689999999999999999999998773
No 49
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=99.61 E-value=1.5e-15 Score=155.22 Aligned_cols=164 Identities=22% Similarity=0.299 Sum_probs=123.9
Q ss_pred ccccccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHH
Q psy4132 205 TEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDI 280 (473)
Q Consensus 205 ~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~ 280 (473)
....+|.+.+|.+...++..... ......+.+.++++|+.+|.|++|.|+.+||+.++ .++ ....++.+++.
T Consensus 281 s~k~iD~de~g~i~~~e~~~~~~----~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~ 356 (450)
T 3sg6_A 281 ELKGIDFKEDGNILGHKLEYNTR----DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 356 (450)
T ss_dssp EEEEESCCTTSTTTTTCBCCC-------CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHT
T ss_pred ccccCCccccccchhhhhhhhhc----ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 34457888888887777643111 23456678899999999999999999999999954 333 23358899999
Q ss_pred hcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHh
Q psy4132 281 FDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINR 360 (473)
Q Consensus 281 ~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~ 360 (473)
+|.|++|.|+|+||+.++..........+.++.+|+.||.|++|.++.. |+..+|. .
T Consensus 357 ~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~e---ELr~~L~--------------------~ 413 (450)
T 3sg6_A 357 VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA---ELRHVMT--------------------N 413 (450)
T ss_dssp TCTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHH---HHHHHHH--------------------H
T ss_pred hccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHH---HHHHHHH--------------------H
Confidence 9999999999999999998876777778899999999999999666654 3333332 2
Q ss_pred hhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 361 ARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 361 ~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
+ | ..++++++..++..+|.|+||.|+++||+..++
T Consensus 414 l-G-~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~ 448 (450)
T 3sg6_A 414 L-G-EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448 (450)
T ss_dssp H-T-CCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred h-C-CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 2 2 148899999999999999999999999987654
No 50
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=99.61 E-value=1.6e-15 Score=132.49 Aligned_cols=131 Identities=23% Similarity=0.415 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKM 235 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~ 235 (473)
+++..+|+++|..+|+ ..++...++.++.+++.. ++...+.. +|.+++|.|+|.||+..+.... ..
T Consensus 6 ~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~--~~~~~~~~--~d~~~~g~i~~~ef~~~~~~~~---~~ 78 (148)
T 2lmt_A 6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEA--ELQDLIAE--AENNNNGQLNFTEFCGIMAKQM---RE 78 (148)
T ss_dssp SHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHH--HHHHHHHH--HHTTSTTEEEHHHHHHHHHHTT---TT
T ss_pred HHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHH--HHHHHHHh--cccCCCCcccHHHHHHHHHHHh---cc
Confidence 3455689999999998 789999999999999887 66655543 7999999999999999886322 22
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
....+.++.+|+.||.|++|+|+.+||+.++ .++ ....++.+++.+|.|++|.|+|+||+.+|+.
T Consensus 79 ~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 79 TDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp TTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred cCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 3345679999999999999999999999853 333 2335899999999999999999999998864
No 51
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=99.60 E-value=1.8e-15 Score=132.71 Aligned_cols=137 Identities=20% Similarity=0.167 Sum_probs=110.5
Q ss_pred chHHHHHHHHHHHhhCC--CCCCCccHHHHhcch-hccCC---HHHHHHHHHhcCCCCCcccHHHHHHHHhhcccC-CCc
Q psy4132 235 MVVDIRRLGKRFRKLDL--DNSGALSIDEFMSLP-ELQQN---PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVK-GDR 307 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~--d~~G~Is~~el~~l~-~~~~~---~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~-~~~ 307 (473)
+..+...++.+|..+|. +++|+|+.+||..++ .++.. ..+..+ ..+|.+++|.|+|.||+.++...... ...
T Consensus 4 s~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~ 82 (156)
T 1wdc_C 4 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGT 82 (156)
T ss_dssp CHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCC
T ss_pred CHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCCh
Confidence 45678899999999999 999999999999853 33332 346777 88999999999999999999887654 667
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHH--hccCCCC
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLA--LDKLPDS 385 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~--~D~~~dg 385 (473)
.+.++.+|+.||.|++|.+... ++..++. .. | ..++++++..+++. +|.|++|
T Consensus 83 ~~~l~~~F~~~D~d~~G~I~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~~~~D~d~dg 137 (156)
T 1wdc_C 83 FADYMEAFKTFDREGQGFISGA---ELRHVLT--------------------AL-G-ERLSDEDVDEIIKLTDLQEDLEG 137 (156)
T ss_dssp HHHHHHHHHTTCSSSSSEEEHH---HHHHHHH--------------------HS-S-SCCCHHHHHHHHHHHTCCCCTTS
T ss_pred HHHHHHHHHHhCCCCCCcCcHH---HHHHHHH--------------------Hc-C-CCCCHHHHHHHHHHhCCCCCCCC
Confidence 8899999999999999655553 3333333 21 2 14889999999999 9999999
Q ss_pred CeeHHhhhccce
Q psy4132 386 PIYLKTYSSGVK 397 (473)
Q Consensus 386 ~Is~~EF~~~~~ 397 (473)
.|+++||...+.
T Consensus 138 ~i~~~eF~~~~~ 149 (156)
T 1wdc_C 138 NVKYEDFVKKVM 149 (156)
T ss_dssp EEEHHHHHHHHH
T ss_pred cEeHHHHHHHHh
Confidence 999999987765
No 52
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=99.60 E-value=3.8e-15 Score=138.66 Aligned_cols=144 Identities=24% Similarity=0.373 Sum_probs=114.2
Q ss_pred cchHHHHHHHHHHHhhCC-----CC-C--CCccHHHHhcchhccCCHHHHHHHHHhcCCCCCc-ccHHHHHHHHhhcccC
Q psy4132 234 KMVVDIRRLGKRFRKLDL-----DN-S--GALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGE-VDFKEFIQGVSQFSVK 304 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~-----d~-~--G~Is~~el~~l~~~~~~~~~~~l~~~~D~d~dG~-I~~~EF~~~l~~~~~~ 304 (473)
....++..+..+|..+|. |+ + |.|+.+||..+..++.++..++++..+|.|++|. |+|+||+.++......
T Consensus 45 ~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~l~~lg~~~~~~~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~ 124 (214)
T 2l4h_A 45 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDT 124 (214)
T ss_dssp CCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTTCHHHHTSTTHHHHHHHHCCSSSCCSEEHHHHHHHHHHTSSC
T ss_pred CCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHHhhccCCChHHHHHHHHhCcCCCCCEecHHHHHHHHHHHcCC
Confidence 456788899999999998 66 6 9999999999767777788889999999999999 9999999999987665
Q ss_pred CCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHH----HHHHhc
Q psy4132 305 GDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLN----SCLALD 380 (473)
Q Consensus 305 ~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~----~~~~~D 380 (473)
...++.++.+|+.||.|++|.+...|+..++..+.. .. +...++++++.. +|+.+|
T Consensus 125 ~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~---~~-----------------~~~~~s~~e~~~~~~~~~~~~D 184 (214)
T 2l4h_A 125 ATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTG---EG-----------------EDTRLSASEMKQLIDNILEESD 184 (214)
T ss_dssp SCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHH---SS-----------------SCTTCSCTHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhc---cc-----------------cCCCCCHHHHHHHHHHHHHHhC
Confidence 666789999999999999976666544444333321 00 001255555554 899999
Q ss_pred cCCCCCeeHHhhhccce
Q psy4132 381 KLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 381 ~~~dg~Is~~EF~~~~~ 397 (473)
.|+||.|+++||...+.
T Consensus 185 ~d~dG~Is~~EF~~~~~ 201 (214)
T 2l4h_A 185 IDRDGTINLSEFQHVIS 201 (214)
T ss_dssp CSCCSSBCSHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHH
Confidence 99999999999987664
No 53
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.60 E-value=2.5e-15 Score=135.30 Aligned_cols=123 Identities=14% Similarity=0.205 Sum_probs=98.6
Q ss_pred hhhHHHHHHHH------hhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCC
Q psy4132 179 LMSMAKEMVEI------SKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLD 252 (473)
Q Consensus 179 ~~e~~~~l~~l------g~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d 252 (473)
..++...|+++ +..++.. ++..++.. +|.|++|.|+|+||+.++. ....++.+|+.|| |
T Consensus 23 ~~EL~~~l~~l~~~~~~g~~~~~~--~~~~l~~~--~D~d~~G~I~f~EF~~~~~----------~~~~l~~aF~~fD-d 87 (174)
T 2i7a_A 23 ATQLQGLLNQELLTGPPGDMFSLD--ECRSLVAL--MELKVNGRLDQEEFARLWK----------RLVHYQHVFQKVQ-T 87 (174)
T ss_dssp HHHHHHHHHHHHC-----CCCCHH--HHHHHHHH--HCSSCSSEECHHHHHHHHH----------HHHHHHHHHHHHC-S
T ss_pred HHHHHHHHHHHHhccCCCCCCCHH--HHHHHHHH--HCCCCCCcCCHHHHHHHHH----------HHHHHHHHHHHhc-C
Confidence 34566667776 4455544 45555543 8999999999999999876 3468999999999 9
Q ss_pred CCCCccHHHHhcch-hc----cC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCc
Q psy4132 253 NSGALSIDEFMSLP-EL----QQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDD 324 (473)
Q Consensus 253 ~~G~Is~~el~~l~-~~----~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg 324 (473)
++|+|+.+||+.+. .+ +. ...++.++..+| |++|.|+|+||+.++... +.+..+|+.+|+|++|
T Consensus 88 ~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~-------~~~~~~F~~~D~d~~G 159 (174)
T 2i7a_A 88 SPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL-------EAMAKTFRNLSKDGKG 159 (174)
T ss_dssp BTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH-------HHHHHHHHHHCSSSSC
T ss_pred CCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH-------HHHHHHHHHhCCCCCC
Confidence 99999999999853 33 32 235789999999 999999999999998765 6789999999999997
No 54
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=99.60 E-value=5.2e-15 Score=134.01 Aligned_cols=138 Identities=19% Similarity=0.207 Sum_probs=105.5
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHh-----cc-hhccCCH--------HHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFM-----SL-PELQQNP--------LVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~-----~l-~~~~~~~--------~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
...+..+++.+|+.+|.|++|+|+.+||. .+ ..++..+ .++.++..+|.|++|.|+|+||+.++..
T Consensus 11 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~ 90 (191)
T 1uhk_A 11 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK 90 (191)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHH
Confidence 45678899999999999999999999998 43 3344333 3677999999999999999999998876
Q ss_pred cccC------CCcHHHHH----HHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHH
Q psy4132 301 FSVK------GDRESKLK----FAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPE 370 (473)
Q Consensus 301 ~~~~------~~~~e~l~----~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ 370 (473)
.... ....+.++ .+|+.+|.|++|.++..|+.. ++. .. | ..++++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~---~l~--------------------~~-g-~~~~~~ 145 (191)
T 1uhk_A 91 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKA---YTK--------------------AA-G-IIQSSE 145 (191)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHH---HHH--------------------HH-T-SCCSHH
T ss_pred HhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHH---HHH--------------------Hh-C-CCCCHH
Confidence 5321 12223333 899999999996555543333 332 21 2 147899
Q ss_pred HHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 371 DLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 371 ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
++..+++.+|.|+||.|+++||...+.
T Consensus 146 ~~~~~~~~~D~d~dG~i~~~eF~~~~~ 172 (191)
T 1uhk_A 146 DCEETFRVCDIDESGQLDVDEMTRQHL 172 (191)
T ss_dssp HHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 999999999999999999999998776
No 55
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=99.60 E-value=1e-15 Score=140.55 Aligned_cols=139 Identities=20% Similarity=0.271 Sum_probs=101.4
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHH
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESK 310 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~ 310 (473)
...+...++.+|+.+|.|++|.|+.+||..++ ..+ ....+..++..+|.+++|.|+|+||+.++... .....++.
T Consensus 52 ~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~-~~~~~~~~ 130 (197)
T 3pm8_A 52 CDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDK-QTYLKKEV 130 (197)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCH-HHHCSHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH-HhhhhHHH
Confidence 34567889999999999999999999999953 232 34568999999999999999999999887655 33445789
Q ss_pred HHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHH
Q psy4132 311 LKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLK 390 (473)
Q Consensus 311 l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~ 390 (473)
++.+|+.||.|++|.++. +|+..++..... | ..++++++..+++.+|.|+||.|+++
T Consensus 131 l~~~F~~~D~d~~G~Is~---~El~~~l~~~~~-------------------~-~~~~~~~~~~l~~~~D~d~dG~Is~~ 187 (197)
T 3pm8_A 131 CLIPFKFFDIDGNGKISV---EELKRIFGRDDI-------------------E-NPLIDKAIDSLLQEVDLNGDGEIDFH 187 (197)
T ss_dssp HHHHHHHHCTTCSSEECH---HHHHHHHC-----------------------C-CHHHHHHHHHHHHHHCTTCSSSEEHH
T ss_pred HHHHHHHHCCCCCCCCCH---HHHHHHHHhccc-------------------C-CCCCHHHHHHHHHHHcCCCCCcCcHH
Confidence 999999999999966666 444444432100 1 12567889999999999999999999
Q ss_pred hhhccce
Q psy4132 391 TYSSGVK 397 (473)
Q Consensus 391 EF~~~~~ 397 (473)
||...++
T Consensus 188 EF~~~l~ 194 (197)
T 3pm8_A 188 EFMLMMS 194 (197)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987654
No 56
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.60 E-value=3.1e-15 Score=137.86 Aligned_cols=167 Identities=18% Similarity=0.278 Sum_probs=124.1
Q ss_pred ccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCC-CCCCccHHHHhcchh-cc----CCHHHHHHHHHhc
Q psy4132 209 SNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLD-NSGALSIDEFMSLPE-LQ----QNPLVQRVIDIFD 282 (473)
Q Consensus 209 ~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d-~~G~Is~~el~~l~~-~~----~~~~~~~l~~~~D 282 (473)
++.+++|.|+.+++..++... .....++..+|+.||.+ ++|.|+.+||..++. ++ ....+..+|..+|
T Consensus 8 mg~~~~g~l~~~el~~~~~~~------~~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D 81 (207)
T 2d8n_A 8 MGNSKSGALSKEILEELQLNT------KFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFD 81 (207)
T ss_dssp CTTCCTTCCCHHHHHHHHHHS------SCCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHC
T ss_pred hccccCCCCCHHHHHHHHHHc------CCCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhc
Confidence 678899999999999887621 13567888899999998 799999999999643 22 2335789999999
Q ss_pred CCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCC----CccchhHHHHHH
Q psy4132 283 EDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAG----GTMLLTDAYCRI 358 (473)
Q Consensus 283 ~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~----g~i~l~d~~~~~ 358 (473)
.|++|.|+++||+.++.... .....+.++.+|+.||.|++|.+...|+ ..++.......+ ..++-.
T Consensus 82 ~d~~G~i~~~Ef~~~~~~~~-~~~~~~~~~~~f~~~D~d~~G~I~~~E~---~~~l~~~~~~~g~~~~~~l~~~------ 151 (207)
T 2d8n_A 82 SNLDGTLDFKEYVIALHMTT-AGKTNQKLEWAFSLYDVDGNGTISKNEV---LEIVMAIFKMITPEDVKLLPDD------ 151 (207)
T ss_dssp TTCCSEEEHHHHHHHHHHHS-CSSSSTTHHHHHHHHCTTCSSEECHHHH---HHHHHHHHHHSCHHHHHTSCTT------
T ss_pred CCCCCeEeHHHHHHHHHHHc-CCCHHHHHHHHHHHhcCCCCCeEcHHHH---HHHHHHHHHHhccccCCCcccc------
Confidence 99999999999999998763 3456678999999999999977777444 444433211000 000000
Q ss_pred HhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 359 NRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 359 ~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
+....+++..+|+.+|.|+||.|+++||...+.
T Consensus 152 ------~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 184 (207)
T 2d8n_A 152 ------ENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTL 184 (207)
T ss_dssp ------TSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHH
T ss_pred ------cccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHH
Confidence 012346688999999999999999999998775
No 57
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=99.59 E-value=5.6e-15 Score=131.00 Aligned_cols=134 Identities=18% Similarity=0.245 Sum_probs=105.6
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC-CH---HHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHH
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ-NP---LVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRES 309 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~-~~---~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e 309 (473)
...+...++.+|..+|.|++|+|+.+||..++ .++. .+ .+..++.. .+|.|+|+||+.++..........+
T Consensus 20 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~----~dg~i~~~eF~~~~~~~~~~~~~~~ 95 (166)
T 2mys_B 20 DETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPINFTVFLTMFGEKLKGADPED 95 (166)
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHH----CCCCcCHHHHHHHHHHHhccCCcHH
Confidence 45678889999999999999999999999953 3443 33 34555554 3899999999999988766667889
Q ss_pred HHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeH
Q psy4132 310 KLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYL 389 (473)
Q Consensus 310 ~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~ 389 (473)
.++.+|+.||.|++|.++.. ++..++. .. | ..++++++..+|..+|.|+||.|++
T Consensus 96 ~l~~~F~~~D~d~~G~I~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~~D~d~dg~I~~ 150 (166)
T 2mys_B 96 VIMGAFKVLDPDGKGSIKKS---FLEELLT--------------------TG-G-GRFTPEEIKNMWAAFPPDVAGNVDY 150 (166)
T ss_pred HHHHHHHHhCCCCCcceeHH---HHHHHHH--------------------Hc-C-CCCCHHHHHHHHHhcCCCCCCeEeH
Confidence 99999999999999655553 3333333 21 2 1488999999999999999999999
Q ss_pred Hhhhccce
Q psy4132 390 KTYSSGVK 397 (473)
Q Consensus 390 ~EF~~~~~ 397 (473)
+||...+.
T Consensus 151 ~eF~~~~~ 158 (166)
T 2mys_B 151 KNICYVIT 158 (166)
T ss_pred HHHHHHHH
Confidence 99987764
No 58
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=99.59 E-value=5.6e-15 Score=133.31 Aligned_cols=133 Identities=20% Similarity=0.355 Sum_probs=104.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccCC-HHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHH
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQN-PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKF 313 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~~-~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~ 313 (473)
..+...++.+|+.+|.|++|+|+.+||..++ .++.. ..+..++..+|.|++|.|+|+||+.++..... ..++.+..
T Consensus 35 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~--~~~~~~~~ 112 (180)
T 3mse_B 35 NNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWDINRILQALDINDRGNITYTEFMAGCYRWKN--IESTFLKA 112 (180)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTT--C--CHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhccc--CCHHHHHH
Confidence 4567899999999999999999999999953 34433 35889999999999999999999998876533 23478999
Q ss_pred HhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCC--------C
Q psy4132 314 AFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPD--------S 385 (473)
Q Consensus 314 ~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~d--------g 385 (473)
+|+.||.|++|.++. +|+..++. + ..++++++..+++.+|.|+| |
T Consensus 113 ~F~~~D~d~~G~I~~---~El~~~l~-----------------------~-~~~~~~~~~~~~~~~d~~~d~~~~~~~~G 165 (180)
T 3mse_B 113 AFNKIDKDEDGYISK---SDIVSLVH-----------------------D-KVLDNNDIDNFFLSVHSIKKGIPREHIIN 165 (180)
T ss_dssp HHHHHCTTCSSCBCH---HHHHHHTT-----------------------T-SSCCHHHHHHHHHHHHTC---------CC
T ss_pred HHHHHCCCCCCCCCH---HHHHHHHc-----------------------C-CCCCHHHHHHHHHHhhhccCcccccccCC
Confidence 999999999955555 34443333 1 14889999999999999998 9
Q ss_pred CeeHHhhhccce
Q psy4132 386 PIYLKTYSSGVK 397 (473)
Q Consensus 386 ~Is~~EF~~~~~ 397 (473)
.|+++||...++
T Consensus 166 ~i~~~eF~~~l~ 177 (180)
T 3mse_B 166 KISFQEFKDYML 177 (180)
T ss_dssp CBCHHHHHHHHH
T ss_pred eeeHHHHHHHHH
Confidence 999999987653
No 59
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=99.59 E-value=2.4e-15 Score=132.44 Aligned_cols=138 Identities=15% Similarity=0.131 Sum_probs=108.9
Q ss_pred chHHHHHHHHHHHhhC--CCCCCCccHHHHhcch-hccCC---HHHHHHHHHhcCCCCCcccHHHHHHHHhh--cccCCC
Q psy4132 235 MVVDIRRLGKRFRKLD--LDNSGALSIDEFMSLP-ELQQN---PLVQRVIDIFDEDRNGEVDFKEFIQGVSQ--FSVKGD 306 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D--~d~~G~Is~~el~~l~-~~~~~---~~~~~l~~~~D~d~dG~I~~~EF~~~l~~--~~~~~~ 306 (473)
...+..+++.+|+.+| .+++|.|+.+||..++ .++.. ..+..++..+|.+ +|.|+|+||+.++.. ......
T Consensus 4 s~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~d~~-~g~i~~~eF~~~~~~~~~~~~~~ 82 (159)
T 2ovk_C 4 TKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMG-EKAYKLEEILPIYEEMSSKDTGT 82 (159)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHTTCCSSTT-SCEEEHHHHHHHHHHHTTCSTTC
T ss_pred CHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC-CCeEcHHHHHHHHHHHhhccCCC
Confidence 4567889999999999 9999999999999853 34332 3577888888875 699999999999954 334556
Q ss_pred cHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHH--HhccCCC
Q psy4132 307 RESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCL--ALDKLPD 384 (473)
Q Consensus 307 ~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~--~~D~~~d 384 (473)
..+.++.+|+.||+|++|.++.. ++..++.. . | ..++++++..+++ .+|.|+|
T Consensus 83 ~~~~l~~~F~~~D~d~~G~I~~~---El~~~l~~--------------------~-g-~~~~~~~~~~~~~~~~~D~d~d 137 (159)
T 2ovk_C 83 AADEFMEAFKTFDREGQGLISSA---EIRNVLKM--------------------L-G-ERITEDQCNDIFTFCDIREDID 137 (159)
T ss_dssp CHHHHHHHHHHTCTTSSSEECHH---HHHHHHHH--------------------S-S-SCCCHHHHHHHHHHTTCCCCTT
T ss_pred cHHHHHHHHHHHCCCCCCcCcHH---HHHHHHHH--------------------h-C-CCCCHHHHHHHHHHhcCCCCCC
Confidence 78899999999999999666553 33333332 1 2 2488999999999 8899999
Q ss_pred CCeeHHhhhcccee
Q psy4132 385 SPIYLKTYSSGVKV 398 (473)
Q Consensus 385 g~Is~~EF~~~~~v 398 (473)
|.|+++||+..+..
T Consensus 138 g~i~~~eF~~~~~~ 151 (159)
T 2ovk_C 138 GNIKYEDLMKKVMA 151 (159)
T ss_dssp CCEEHHHHHHHHHH
T ss_pred CcEeHHHHHHHHhc
Confidence 99999999987753
No 60
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=99.59 E-value=3.2e-15 Score=137.96 Aligned_cols=135 Identities=15% Similarity=0.145 Sum_probs=102.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc-----CCHHHHHHH-------HHhcCCCCCcccHHHHHHHHh---
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ-----QNPLVQRVI-------DIFDEDRNGEVDFKEFIQGVS--- 299 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~-----~~~~~~~l~-------~~~D~d~dG~I~~~EF~~~l~--- 299 (473)
..+...++.+|+.+|.|++|.|+.+||..++. ++ ....+..++ ..+|.|++|.|+|+||+.++.
T Consensus 32 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~~~~ 111 (208)
T 2hpk_A 32 PKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFA 111 (208)
T ss_dssp ----CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHh
Confidence 44567899999999999999999999998532 22 234577888 999999999999999999986
Q ss_pred ------hcccCCCcHHH-HHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHH
Q psy4132 300 ------QFSVKGDRESK-LKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDL 372 (473)
Q Consensus 300 ------~~~~~~~~~e~-l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei 372 (473)
.........+. ++.+|+.||.|++|.++.. |+..++. . .| ++++++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~---El~~~l~--------------------~-~g---~~~~~~ 164 (208)
T 2hpk_A 112 EAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVD---ELKTMMK--------------------A-FD---VPQEAA 164 (208)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHH---HHHHHHH--------------------H-TT---SCTTHH
T ss_pred hhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHH---HHHHHHH--------------------H-hC---cCHHHH
Confidence 33233333444 8999999999999555553 3333332 2 12 667789
Q ss_pred HHHHHHhccCCCCCeeHHhhhccce
Q psy4132 373 LNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 373 ~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
..+|..+|.|+||.|+++||...+.
T Consensus 165 ~~~~~~~D~d~dG~I~~~EF~~~~~ 189 (208)
T 2hpk_A 165 YTFFEKADTDKSGKLERTELVHLFR 189 (208)
T ss_dssp HHHHHHHCTTCCSSBCHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 9999999999999999999998775
No 61
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.59 E-value=1.1e-15 Score=146.41 Aligned_cols=198 Identities=14% Similarity=0.115 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcch-----hccC--CH---HHH----HHHHHhcCCCCCcccHHHHHHHHhh--
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLP-----ELQQ--NP---LVQ----RVIDIFDEDRNGEVDFKEFIQGVSQ-- 300 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-----~~~~--~~---~~~----~l~~~~D~d~dG~I~~~EF~~~l~~-- 300 (473)
...++++.+|+.+|.|++|+|+.+||..++ .++. .+ .+. .+|..+|.|++|.|+|+||+.++..
T Consensus 8 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~ 87 (272)
T 2be4_A 8 LDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQE 87 (272)
T ss_dssp CCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSCHH
T ss_pred cCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhhhh
Confidence 445678888888888888888888888753 2333 21 232 3457778888888888888887421
Q ss_pred --------cccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHH---------------------hchhhcCCCccch
Q psy4132 301 --------FSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAAL---------------------IEPLTSAGGTMLL 351 (473)
Q Consensus 301 --------~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L---------------------~~~~~~~~g~i~l 351 (473)
........+.++.+|+.||.|++|.++..|+..++..+ .....+.+|.|++
T Consensus 88 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~ 167 (272)
T 2be4_A 88 ENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDL 167 (272)
T ss_dssp HHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEH
T ss_pred HHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcH
Confidence 11234556778888888888888777776665554432 1122344567777
Q ss_pred hHHHHHHHhhhC------C----CCCCHHHHHHHHHHhccCCCCCeeHHhhhccceeeee---cccCcHHH---HHHHHH
Q psy4132 352 TDAYCRINRARG------L----ELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVLQL---KSCEDASF---VEKTYE 415 (473)
Q Consensus 352 ~d~~~~~~~~~g------~----~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl~~---~~~~~~~~---~~~~~~ 415 (473)
.++...+..... . ...+.+++..+|+.+|+|++|.|+.+||...++.+.. ...+++.+ +..+++
T Consensus 168 ~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (272)
T 2be4_A 168 NDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLT 247 (272)
T ss_dssp HHHGGGSCCSSCSSTTSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHhhhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 776554432000 0 0133456778888888888888888888877764432 01222221 223555
Q ss_pred HHhh--CCCCCHHHHHHhhCC
Q psy4132 416 IVSQ--NVFVTVEQFSRLASV 434 (473)
Q Consensus 416 ~~~~--~~~ls~~e~a~~~~~ 434 (473)
.++. +|.||..||.+.+..
T Consensus 248 ~~D~d~dG~is~~EF~~~~~~ 268 (272)
T 2be4_A 248 HCDMNKDGKIQKSELALCLGL 268 (272)
T ss_dssp HHCCSTTCEEEHHHHHHHTTC
T ss_pred HhCCCCCCcCcHHHHHHHHcc
Confidence 5543 467888888877654
No 62
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=99.58 E-value=6.2e-15 Score=129.28 Aligned_cols=137 Identities=15% Similarity=0.261 Sum_probs=105.2
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHH
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLK 312 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~ 312 (473)
....+...++.+|+.+|.+++|+|+.+||..++ .++..+....+...+ .+++|.|+|+||+.++..........+.++
T Consensus 12 l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~-~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~ 90 (156)
T 1wdc_B 12 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML-KEAPGPLNFTMFLSIFSDKLSGTDSEETIR 90 (156)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH-TTSSSCCCHHHHHHHHHHHTCSCCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH-HhCCCcCcHHHHHHHHHHHhcCCChHHHHH
Confidence 345678899999999999999999999999853 444333322222222 357999999999999987766677889999
Q ss_pred HHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhh
Q psy4132 313 FAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTY 392 (473)
Q Consensus 313 ~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF 392 (473)
.+|+.||.|++|.++.. ++..++. .. | ..++++++..+++.+|.| ||.|+++||
T Consensus 91 ~~F~~~D~d~~G~I~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~~d~~-dg~i~~~eF 144 (156)
T 1wdc_B 91 NAFAMFDEQETKKLNIE---YIKDLLE--------------------NM-G-DNFNKDEMRMTFKEAPVE-GGKFDYVKF 144 (156)
T ss_dssp HHHHTTCTTCCSCEEHH---HHHHHHH--------------------HS-S-SCCCHHHHHHHHHHCCEE-TTEECHHHH
T ss_pred HHHHHHCcCCCCccCHH---HHHHHHH--------------------Hh-C-CCCCHHHHHHHHHhcCCC-CCEEeHHHH
Confidence 99999999999655553 3333333 22 2 148899999999999999 999999999
Q ss_pred hccce
Q psy4132 393 SSGVK 397 (473)
Q Consensus 393 ~~~~~ 397 (473)
...+.
T Consensus 145 ~~~~~ 149 (156)
T 1wdc_B 145 TAMIK 149 (156)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87664
No 63
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.58 E-value=9.9e-15 Score=132.47 Aligned_cols=137 Identities=12% Similarity=0.121 Sum_probs=106.2
Q ss_pred chHHHHHHHHHHHhh-CCCCCCCccHHHHhcch-hc----c---CCHHHHHHH-----------HHhcCCCCCcccHHHH
Q psy4132 235 MVVDIRRLGKRFRKL-DLDNSGALSIDEFMSLP-EL----Q---QNPLVQRVI-----------DIFDEDRNGEVDFKEF 294 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~-D~d~~G~Is~~el~~l~-~~----~---~~~~~~~l~-----------~~~D~d~dG~I~~~EF 294 (473)
.....++++.+|+.+ |.|++|+|+.+||..+. .. + ....+..++ ..+|.|++|.|+++||
T Consensus 7 s~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef 86 (191)
T 2ccm_A 7 SDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEW 86 (191)
T ss_dssp CHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred cHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHH
Confidence 456778899999999 99999999999999853 22 2 234566676 9999999999999999
Q ss_pred HHHHhhccc--------CCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCC
Q psy4132 295 IQGVSQFSV--------KGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLEL 366 (473)
Q Consensus 295 ~~~l~~~~~--------~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ 366 (473)
+.++..... .....+.+..+|+.+|.|++|.++. .|+...+... |
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~-----------------------~E~~~~l~~~-g--- 139 (191)
T 2ccm_A 87 LKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDK-----------------------HEYSTVYMSY-G--- 139 (191)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCH-----------------------HHHHHHHHTT-T---
T ss_pred HHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcH-----------------------HHHHHHHHHh-C---
Confidence 999877532 1223467899999999999955554 3333333222 3
Q ss_pred CCHHHHHHHHHHhccCCCCCeeHHhhhcccee
Q psy4132 367 LSPEDLLNSCLALDKLPDSPIYLKTYSSGVKV 398 (473)
Q Consensus 367 ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~v 398 (473)
++++++..+|+.+|.|+||.|+++||...++.
T Consensus 140 ~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~ 171 (191)
T 2ccm_A 140 IPKSDCDAAFDTLSDGGKTMVTREIFARLWTE 171 (191)
T ss_dssp CCHHHHHHHHHHHTTTTTSCCBHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence 77889999999999999999999999987763
No 64
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.58 E-value=1.1e-14 Score=129.07 Aligned_cols=142 Identities=14% Similarity=0.234 Sum_probs=114.1
Q ss_pred HHHhhhh-------hhhHHHHHHHHhh-----hhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHH
Q psy4132 172 AFKDLNQ-------LMSMAKEMVEISK-----NISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDI 239 (473)
Q Consensus 172 aF~~lD~-------~~e~~~~l~~lg~-----~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~ 239 (473)
+|..+|+ ..++...|+.+|. .++.. ++..++. .+|.|++|.|+|+||+.++. ..
T Consensus 4 ~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~--~~~~l~~--~~D~~~~g~i~~~eF~~~~~----------~~ 69 (165)
T 1k94_A 4 TYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLE--TCRIMIA--MLDRDHTGKMGFNAFKELWA----------AL 69 (165)
T ss_dssp HHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHH--HHHHHHH--HHCTTCSSCBCHHHHHHHHH----------HH
T ss_pred HHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHH--HHHHHHH--HhCCCCCCcCCHHHHHHHHH----------HH
Confidence 6888887 6788888999887 34544 4555554 37999999999999999877 34
Q ss_pred HHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHh
Q psy4132 240 RRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAF 315 (473)
Q Consensus 240 ~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F 315 (473)
..++.+|+.+|.|++|+|+.+||+.+. ..+ ....++.++..+ |++|.|+|+||+.++... +.+..+|
T Consensus 70 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~-------~~~~~~F 140 (165)
T 1k94_A 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL-------RALTDFF 140 (165)
T ss_dssp HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH-------HHHHHHH
T ss_pred HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH-------HHHHHHH
Confidence 789999999999999999999999953 333 233578888888 899999999999999876 7899999
Q ss_pred HHhcCCCCchhhHhhHHHHHHH
Q psy4132 316 RIYDIDNDDDYYQALGNELIAA 337 (473)
Q Consensus 316 ~~~D~d~dg~~~~~e~~el~~~ 337 (473)
+.+|+|++|.++.. +++++..
T Consensus 141 ~~~D~d~~G~i~~~-~~~~l~~ 161 (165)
T 1k94_A 141 RKRDHLQQGSANFI-YDDFLQG 161 (165)
T ss_dssp HTTCTTCCSEEEEE-HHHHHHH
T ss_pred HHhCCCCCCeEeee-HHHHHHH
Confidence 99999999766654 5555544
No 65
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=99.58 E-value=1.9e-14 Score=134.84 Aligned_cols=143 Identities=24% Similarity=0.365 Sum_probs=111.6
Q ss_pred cchHHHHHHHHHHHhhCCC--CCCCccHHHHhcchhcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcH
Q psy4132 234 KMVVDIRRLGKRFRKLDLD--NSGALSIDEFMSLPELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d--~~G~Is~~el~~l~~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~ 308 (473)
....+...++.+|..+|.| ++|.|+.+||..++... ....+..+|..+|.|++|.|+|+||+.++..........
T Consensus 42 ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~ 121 (226)
T 2zfd_A 42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPID 121 (226)
T ss_dssp CCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHH
T ss_pred CCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhccCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHH
Confidence 4567788999999999999 99999999999964321 233577899999999999999999999998876666778
Q ss_pred HHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHH----HHHHHhccCCC
Q psy4132 309 SKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLL----NSCLALDKLPD 384 (473)
Q Consensus 309 e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~----~~~~~~D~~~d 384 (473)
+.++.+|+.||.|++|.+... |+..++...... .| ..++++++. .+|+.+|.|+|
T Consensus 122 ~~l~~~F~~~D~d~~G~Is~~---E~~~~l~~~~~~-----------------~g-~~~~~~~~~~~~~~~f~~~D~d~d 180 (226)
T 2zfd_A 122 DKIHFSFQLYDLKQQGFIERQ---EVKQMVVATLAE-----------------SG-MNLKDTVIEDIIDKTFEEADTKHD 180 (226)
T ss_dssp HHHHHHHHHHCTTSSSSEEHH---HHHHHHHHHHHH-----------------TT-CCCCHHHHHHHHHHHHHHHCSSCS
T ss_pred HHHHHHHHHhCCCCCCcccHH---HHHHHHHHHHHH-----------------cC-CCCCHHHHHHHHHHHHHHhCCCCC
Confidence 899999999999999766664 444444322111 12 136666654 45679999999
Q ss_pred CCeeHHhhhccce
Q psy4132 385 SPIYLKTYSSGVK 397 (473)
Q Consensus 385 g~Is~~EF~~~~~ 397 (473)
|.|+++||...+.
T Consensus 181 G~I~~~EF~~~~~ 193 (226)
T 2zfd_A 181 GKIDKEEWRSLVL 193 (226)
T ss_dssp SEECHHHHHHHHH
T ss_pred CcCcHHHHHHHHH
Confidence 9999999987765
No 66
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.57 E-value=4.8e-15 Score=134.38 Aligned_cols=135 Identities=21% Similarity=0.260 Sum_probs=107.8
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-c-----------c---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-L-----------Q---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~-----------~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
...+...++.+|+.+|.|++|.|+.+||..+.. . + ....+..++..+|.|++|.|+|+||+.++.
T Consensus 35 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~ 114 (191)
T 3khe_A 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCM 114 (191)
T ss_dssp CTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 456778899999999999999999999998532 2 1 123478899999999999999999999886
Q ss_pred hcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHh
Q psy4132 300 QFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLAL 379 (473)
Q Consensus 300 ~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~ 379 (473)
.. ......+.+..+|+.+|.|++|.++. +|+..++. | ..++++++..+|..+
T Consensus 115 ~~-~~~~~~~~~~~~F~~~D~d~~G~I~~---~E~~~~l~-----------------------~-~~~~~~~~~~~~~~~ 166 (191)
T 3khe_A 115 DK-QLLLSRERLLAAFQQFDSDGSGKITN---EELGRLFG-----------------------V-TEVDDETWHQVLQEC 166 (191)
T ss_dssp CH-HHHCCHHHHHHHHHHHCTTCSSEECH---HHHHHHTT-----------------------S-SCCCHHHHHHHHHHH
T ss_pred Hh-cccchHHHHHHHHHHHCCCCcCcCCH---HHHHHHHc-----------------------c-CCCCHHHHHHHHHHh
Confidence 54 33455678999999999999955555 33333332 1 148899999999999
Q ss_pred ccCCCCCeeHHhhhccce
Q psy4132 380 DKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 380 D~~~dg~Is~~EF~~~~~ 397 (473)
|.|+||.|+++||...+.
T Consensus 167 D~~~dg~i~~~eF~~~~~ 184 (191)
T 3khe_A 167 DKNNDGEVDFEEFVEMMQ 184 (191)
T ss_dssp CTTCSSSEEHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHH
Confidence 999999999999987764
No 67
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.57 E-value=1.3e-14 Score=129.08 Aligned_cols=142 Identities=14% Similarity=0.240 Sum_probs=113.8
Q ss_pred HHHhhhh-------hhhHHHHHHHHhh-----hhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHH
Q psy4132 172 AFKDLNQ-------LMSMAKEMVEISK-----NISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDI 239 (473)
Q Consensus 172 aF~~lD~-------~~e~~~~l~~lg~-----~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~ 239 (473)
+|..+|+ ..++...|+.+|. .++.. ++..++. .+|.|++|.|+|+||+.++. ..
T Consensus 6 ~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~--~~~~l~~--~~D~~~~g~i~~~eF~~~~~----------~~ 71 (167)
T 1gjy_A 6 GYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLE--TCRLMVS--MLDRDMSGTMGFNEFKELWA----------VL 71 (167)
T ss_dssp HHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHH--HHHHHHH--HHCTTCCSCBCHHHHHHHHH----------HH
T ss_pred HHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHH--HHHHHHH--HHCCCCCCcCCHHHHHHHHH----------HH
Confidence 6888888 6888888999886 34444 4454544 37999999999999999887 34
Q ss_pred HHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHh
Q psy4132 240 RRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAF 315 (473)
Q Consensus 240 ~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F 315 (473)
..++.+|+.+|.|++|+|+.+||+.+. ..+ ....++.++..+ |++|.|+|+||+.++... +.+..+|
T Consensus 72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~-------~~~~~~F 142 (167)
T 1gjy_A 72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL-------RALTDSF 142 (167)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH-------HHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH-------HHHHHHH
Confidence 789999999999999999999999854 333 234578899988 889999999999999776 7899999
Q ss_pred HHhcCCCCchhhHhhHHHHHHH
Q psy4132 316 RIYDIDNDDDYYQALGNELIAA 337 (473)
Q Consensus 316 ~~~D~d~dg~~~~~e~~el~~~ 337 (473)
+.+|+|++|.++.. +++++.+
T Consensus 143 ~~~D~d~~G~i~~~-~~~~l~~ 163 (167)
T 1gjy_A 143 RRRDSAQQGMVNFS-YDDFIQC 163 (167)
T ss_dssp HHHCTTCCSEEEEE-HHHHHHH
T ss_pred HHhCCCCCeeEEee-HHHHHHH
Confidence 99999999766654 5555544
No 68
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.57 E-value=3.4e-14 Score=129.45 Aligned_cols=108 Identities=18% Similarity=0.241 Sum_probs=52.4
Q ss_pred ccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchhccCCHHHHHHHHHhcCCCCCc
Q psy4132 209 SNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGE 288 (473)
Q Consensus 209 ~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~~~~~~~l~~~~D~d~dG~ 288 (473)
+|.|++|.|+++||..++.. .........+..+|+.+|.|++|.|+.+||..+.... ..+..+|+.+|.|++|.
T Consensus 36 ~D~d~~G~I~~~El~~~l~~----~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~--~~~~~~F~~~D~d~~G~ 109 (191)
T 1y1x_A 36 VDTDGSGAISVPELNAALSS----AGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI--LSMREGFRKRDSSGDGR 109 (191)
T ss_dssp HCTTCSSSBCHHHHHHHHCB----TTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH--HHHHHHHHHHCTTSSSC
T ss_pred HcCCCCCcCcHHHHHHHHHH----cCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH--HHHHHHHHHhCCCCCCe
Confidence 45555555555555555521 0011223444555555555555555555555432211 23445555555555555
Q ss_pred ccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCC
Q psy4132 289 VDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDND 323 (473)
Q Consensus 289 I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~d 323 (473)
|+.+||..++... .....++.+..+|+.+|.|++
T Consensus 110 i~~~e~~~~l~~~-g~~~~~~~~~~~~~~~D~d~d 143 (191)
T 1y1x_A 110 LDSNEVRAALLSS-GYQVSEQTFQALMRKFDRQRR 143 (191)
T ss_dssp BCHHHHHHHHHTT-SCCCCHHHHHHHHHHHCTTCS
T ss_pred EcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCC
Confidence 5555555555443 223344455555555555555
No 69
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.57 E-value=4.7e-15 Score=127.95 Aligned_cols=128 Identities=21% Similarity=0.282 Sum_probs=100.8
Q ss_pred HHHHHHhhCCCCCCCccHHHHhcch-hccCCH---HHHHHHHHhcCCCCCcccHHHHHHHHhhcc-cCCCcHHHHHHHhH
Q psy4132 242 LGKRFRKLDLDNSGALSIDEFMSLP-ELQQNP---LVQRVIDIFDEDRNGEVDFKEFIQGVSQFS-VKGDRESKLKFAFR 316 (473)
Q Consensus 242 l~~~F~~~D~d~~G~Is~~el~~l~-~~~~~~---~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~-~~~~~~e~l~~~F~ 316 (473)
++.+|+.+|.|++|.|+.+||..+. .++..+ .+..++.. +++|.|+|+||+.++.... ......+.++.+|+
T Consensus 7 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~ 83 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFR 83 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHH
T ss_pred HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHH
Confidence 9999999999999999999999853 344333 35566665 8899999999999998765 45556788999999
Q ss_pred HhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccc
Q psy4132 317 IYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGV 396 (473)
Q Consensus 317 ~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~ 396 (473)
.+|.|++|.+... ++..++. .. | ..++++++..+++.+|.|+||.|+++||...+
T Consensus 84 ~~D~d~~G~i~~~---e~~~~l~--------------------~~-g-~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 138 (145)
T 2bl0_B 84 ALDKEGNGTIQEA---ELRQLLL--------------------NL-G-DALTSSEVEELMKEVSVSGDGAINYESFVDML 138 (145)
T ss_dssp HHCSSSSSEEEHH---HHHHHHH--------------------HS-S-SCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHH
T ss_pred HhCCCCCCeEcHH---HHHHHHH--------------------Hc-C-CCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 9999999655553 3333333 22 2 14789999999999999999999999998766
Q ss_pred e
Q psy4132 397 K 397 (473)
Q Consensus 397 ~ 397 (473)
.
T Consensus 139 ~ 139 (145)
T 2bl0_B 139 V 139 (145)
T ss_dssp H
T ss_pred H
Confidence 4
No 70
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=99.57 E-value=1.4e-14 Score=127.84 Aligned_cols=133 Identities=20% Similarity=0.240 Sum_probs=101.2
Q ss_pred HHHHHHHHHHhhCCCCCCCccHHHHhcch-----hccC---CHHHH-----------HHHHHhcCCCCCcccHHHHHHHH
Q psy4132 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLP-----ELQQ---NPLVQ-----------RVIDIFDEDRNGEVDFKEFIQGV 298 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d~~G~Is~~el~~l~-----~~~~---~~~~~-----------~l~~~~D~d~dG~I~~~EF~~~l 298 (473)
+.+.++.+|+.+|.|++|+|+.+||..+. .++. ...+. .++..+|.|++|.|+|+||+.++
T Consensus 2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~ 81 (166)
T 3akb_A 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA 81 (166)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 35689999999999999999999999842 2232 22333 45799999999999999999988
Q ss_pred hhcccCCCc------HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHH
Q psy4132 299 SQFSVKGDR------ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDL 372 (473)
Q Consensus 299 ~~~~~~~~~------~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei 372 (473)
......... .+.+..+|+.+|.|++|.++. .++...+... | ++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~-----------------------~E~~~~l~~~-~---~~~~~~ 134 (166)
T 3akb_A 82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTV-----------------------ADTARALTAF-G---VPEDLA 134 (166)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBH-----------------------HHHHHHHHHT-T---CCHHHH
T ss_pred HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCH-----------------------HHHHHHHHHh-C---CCHHHH
Confidence 776433211 344899999999999855544 3333333322 2 778899
Q ss_pred HHHHHHhccCCCCCeeHHhhhccce
Q psy4132 373 LNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 373 ~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
..+|+.+|.|+||.|+++||...+.
T Consensus 135 ~~~~~~~D~d~dg~i~~~ef~~~~~ 159 (166)
T 3akb_A 135 RQAAAALDTDGDGKVGETEIVPAFA 159 (166)
T ss_dssp HHHHHHHCTTCSSBCCHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 9999999999999999999987764
No 71
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=99.57 E-value=7.8e-15 Score=128.22 Aligned_cols=135 Identities=18% Similarity=0.260 Sum_probs=107.1
Q ss_pred ccchHHHHHHHHHHHhhCCCCCCCccHHHHhcc-hhccCCH---HHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcH
Q psy4132 233 KKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSL-PELQQNP---LVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRE 308 (473)
Q Consensus 233 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l-~~~~~~~---~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~ 308 (473)
.....+...++.+|+.+|.|++|+|+.+||..+ ..++..+ .+..++..+ +|.|+|+||+.++..........
T Consensus 9 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~g~i~~~eF~~~~~~~~~~~~~~ 84 (153)
T 2ovk_B 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLTLFGEKVSGTDPE 84 (153)
T ss_dssp TCCHHHHHHHHHHHHHHCCSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHS----SSCCCSHHHHHTTTTTTTTCCCT
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHHHhccCChH
Confidence 345677889999999999999999999999995 3444333 466677666 89999999999998776667778
Q ss_pred HHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCee
Q psy4132 309 SKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIY 388 (473)
Q Consensus 309 e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is 388 (473)
+.+..+|+.||+|++|.++.. ++..++. .. | ..++++++..+++.+|. +||.|+
T Consensus 85 ~~l~~~F~~~D~d~~G~I~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~~d~-~dg~I~ 138 (153)
T 2ovk_B 85 DALRNAFSMFDEDGQGFIPED---YLKDLLE--------------------NM-G-DNFSKEEIKNVWKDAPL-KNKQFN 138 (153)
T ss_dssp THHHHHHHTTCSSCSSCCCHH---HHHHHHH--------------------HS-S-SCCCHHHHHHHHHHCCE-ETTEEC
T ss_pred HHHHHHHHHHCCCCCCeEcHH---HHHHHHH--------------------Hc-C-CCCCHHHHHHHHHHcCC-CCCEEe
Confidence 899999999999999555553 3333332 22 2 14899999999999999 999999
Q ss_pred HHhhhccce
Q psy4132 389 LKTYSSGVK 397 (473)
Q Consensus 389 ~~EF~~~~~ 397 (473)
++||...++
T Consensus 139 ~~eF~~~~~ 147 (153)
T 2ovk_B 139 YNKMVDIKG 147 (153)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999987664
No 72
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.57 E-value=5.2e-15 Score=147.99 Aligned_cols=133 Identities=25% Similarity=0.392 Sum_probs=109.2
Q ss_pred HHhHHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHcccccc
Q psy4132 160 EKQKETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIH 232 (473)
Q Consensus 160 ~~~~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~ 232 (473)
+..+++..+|+++|+.||+ ..++...|+++|..++.. ++..++.. +|.|++|.|+|+||+.++....
T Consensus 295 ~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~Tee--EI~~Lf~~--~D~DgDG~IdFeEFl~lms~~l-- 368 (440)
T 3u0k_A 295 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINE--VDADGDGTIDFPEFLIMMARKM-- 368 (440)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHH--HHHHHHHH--HCSSCSSSEEHHHHHHHHHTC---
T ss_pred hhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHH--HHHHHHHH--hCCCCCCcCcHHHHHHHHHHHh--
Confidence 4456677889999999999 789999999999999887 77776654 8999999999999999887321
Q ss_pred ccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 233 KKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 233 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
......+.++++|+.||.|++|+|+.+||+.++ .++ ....++.+++.+|.|+||.|+|+||+.+|.
T Consensus 369 -k~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMt 438 (440)
T 3u0k_A 369 -KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 438 (440)
T ss_dssp ------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred -cCCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence 223345689999999999999999999999964 333 234689999999999999999999999885
No 73
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=99.56 E-value=1.1e-14 Score=133.31 Aligned_cols=134 Identities=14% Similarity=0.169 Sum_probs=106.8
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccCCHH---HHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHH
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQNPL---VQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRES 309 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~~~~---~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e 309 (473)
....+...++.+|..+|.|++|+|+..||..++ .++..+. +..++..+ +|.|+|+||+.++..........+
T Consensus 51 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~~ 126 (196)
T 3dtp_E 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEED 126 (196)
T ss_dssp SCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcHH
Confidence 345678899999999999999999999999953 4444333 45555554 899999999999988777777889
Q ss_pred HHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeH
Q psy4132 310 KLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYL 389 (473)
Q Consensus 310 ~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~ 389 (473)
.+..+|+.||.|++|.++.. +|..+| . .| ..++++++..+|..+|.|+||.|++
T Consensus 127 ~l~~~F~~~D~d~~G~Is~~---El~~~l-~---------------------~g-~~~~~~~~~~l~~~~D~d~dG~I~~ 180 (196)
T 3dtp_E 127 VIVNAFNLFDEGDGKCKEET---LKRSLT-T---------------------WG-EKFSQDEVDQALSEAPIDGNGLIDI 180 (196)
T ss_dssp HHHHHHHTTCSSSSCCBHHH---HHHHHH-H---------------------SS-SCCCHHHHHHHHHSSCEETTEECHH
T ss_pred HHHHHHHHHCCCCCCcCcHH---HHHHHH-H---------------------cC-CCCCHHHHHHHHHHcCCCCCCEEeH
Confidence 99999999999999655553 333333 1 12 1488999999999999999999999
Q ss_pred Hhhhccce
Q psy4132 390 KTYSSGVK 397 (473)
Q Consensus 390 ~EF~~~~~ 397 (473)
+||+..++
T Consensus 181 ~EF~~~l~ 188 (196)
T 3dtp_E 181 KKFAQILT 188 (196)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHH
Confidence 99998775
No 74
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=99.56 E-value=5.6e-15 Score=135.50 Aligned_cols=155 Identities=23% Similarity=0.269 Sum_probs=110.1
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHH
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKL 311 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l 311 (473)
......++.+|+.+|.|++|+|+.+||..++ .++ ....+..++..+|.|++|.|+|+||+.++.... .....+.+
T Consensus 33 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~-~~~~~~~~ 111 (204)
T 3e3r_A 33 ASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPM-SQAREAVI 111 (204)
T ss_dssp -------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCC-CHHHHHHH
T ss_pred chhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhc-CchHHHHH
Confidence 3456788999999999999999999999953 333 233588999999999999999999999886542 22346789
Q ss_pred HHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhcc-CCCCCeeHH
Q psy4132 312 KFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDK-LPDSPIYLK 390 (473)
Q Consensus 312 ~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~-~~dg~Is~~ 390 (473)
..+|+.||.|++|.++. +|+..++.... .+.+ ..| ...+.+++..+|+.+|. |+||.|+++
T Consensus 112 ~~~F~~~D~d~~G~I~~---~El~~~l~~~~--------~~~~------~~~-~~~~~~~~~~~~~~~D~~d~dg~Is~~ 173 (204)
T 3e3r_A 112 AAAFAKLDRSGDGVVTV---DDLRGVYSGRA--------HPKV------RSG-EWTEDEVLRRFLDNFDSSEKDGQVTLA 173 (204)
T ss_dssp HHHHHHHCTTCSSEECH---HHHHHHCCCTT--------CHHH------HTT-SSCHHHHHHHHHHHHSCSSCCSCEEHH
T ss_pred HHHHHHhCcCCCCeEeH---HHHHHHHcccc--------CCcc------ccC-CCChHHHHHHHHHHhhccCCCCcCcHH
Confidence 99999999999976666 45555554210 0000 012 23667778999999998 999999999
Q ss_pred hhhccceeeeecccCcHHH
Q psy4132 391 TYSSGVKVLQLKSCEDASF 409 (473)
Q Consensus 391 EF~~~~~vl~~~~~~~~~~ 409 (473)
||...+.-+.....+++.+
T Consensus 174 EF~~~~~~~~~~~~~d~~f 192 (204)
T 3e3r_A 174 EFQDYYSGVSASMNTDEEF 192 (204)
T ss_dssp HHHHHHHHHHHHCSSHHHH
T ss_pred HHHHHHHHcCccCCChHHH
Confidence 9998887655444444443
No 75
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.56 E-value=1.5e-14 Score=131.15 Aligned_cols=165 Identities=25% Similarity=0.396 Sum_probs=120.1
Q ss_pred CCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCC-CCCCccHHHHhcchh-ccC----CHHHHHHHHHhcCCCC
Q psy4132 213 RDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLD-NSGALSIDEFMSLPE-LQQ----NPLVQRVIDIFDEDRN 286 (473)
Q Consensus 213 ~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d-~~G~Is~~el~~l~~-~~~----~~~~~~l~~~~D~d~d 286 (473)
.+|.++-+++..+... ......++..+|+.+|.+ ++|.|+.+||..+.. ++. ...+..+|..+|.|++
T Consensus 4 ~~~~l~~~el~~~~~~------~~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~ 77 (190)
T 2l2e_A 4 SQSKLSQDQLQDLVRS------TRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKN 77 (190)
T ss_dssp SSCCSCHHHHHHHHHH------HCSCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSST
T ss_pred ccccCCHHHHHHHHHh------cCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCC
Confidence 3566777777666542 112456788999999999 899999999999643 221 2357889999999999
Q ss_pred CcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCC
Q psy4132 287 GEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLEL 366 (473)
Q Consensus 287 G~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ 366 (473)
|.|++.||+.++.... .....+.+..+|+.+|.|++|.+...|+..++..+....... . .....+.
T Consensus 78 G~i~~~ef~~~~~~~~-~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~---~----------~~~~~~~ 143 (190)
T 2l2e_A 78 GYIDFKEFICALSVTS-RGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSM---V----------KLPEDED 143 (190)
T ss_dssp TCEEHHHHHHHHTTSS-CSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHH---S----------CCCSSCC
T ss_pred CeEeHHHHHHHHHHHc-CCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccc---c----------Ccccccc
Confidence 9999999999998763 456678999999999999997777754444333321100000 0 0000123
Q ss_pred CCHHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 367 LSPEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 367 ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
.+.+++..+|+.+|.|+||.|+++||...+.
T Consensus 144 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 174 (190)
T 2l2e_A 144 TPEKRVNKIFNMMDKNKDGQLTLEEFCEGSK 174 (190)
T ss_dssp CTHHHHHHHHHHHTCCSSCCBCHHHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 6788899999999999999999999987664
No 76
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.56 E-value=1.6e-14 Score=132.32 Aligned_cols=146 Identities=14% Similarity=0.246 Sum_probs=116.7
Q ss_pred HHHHHHHHhhhh-------hhhHHHHHHHHhh-----hhhhhhhhhhcccccccccCCCCCceeHHHHHHHHcccccccc
Q psy4132 167 SNINNAFKDLNQ-------LMSMAKEMVEISK-----NISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKK 234 (473)
Q Consensus 167 ~~l~eaF~~lD~-------~~e~~~~l~~lg~-----~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~ 234 (473)
.++++ |..+|+ ..++...|+.++. .++.. ++..++. .+|.|++|.|+|+||+.++.
T Consensus 33 ~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~--~~~~l~~--~~D~d~~g~i~~~eF~~~~~------- 100 (198)
T 1juo_A 33 DPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLE--TCRLMVS--MLDRDMSGTMGFNEFKELWA------- 100 (198)
T ss_dssp CTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHH--HHHHHHH--HHCTTCSSCEEHHHHHHHHH-------
T ss_pred HHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHH--HHHHHHH--HhCCCCCCeECHHHHHHHHH-------
Confidence 35788 998888 6888889999886 34444 4454544 37999999999999999887
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHH
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESK 310 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~ 310 (473)
....++.+|+.+|.|++|+|+.+||+.+. ..+ ....++.++..+ |++|.|+|+||+.++... +.
T Consensus 101 ---~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~-------~~ 168 (198)
T 1juo_A 101 ---VLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL-------RA 168 (198)
T ss_dssp ---HHHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH-------HH
T ss_pred ---HHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH-------HH
Confidence 34789999999999999999999999854 333 234588899999 899999999999999876 67
Q ss_pred HHHHhHHhcCCCCchhhHhhHHHHHHH
Q psy4132 311 LKFAFRIYDIDNDDDYYQALGNELIAA 337 (473)
Q Consensus 311 l~~~F~~~D~d~dg~~~~~e~~el~~~ 337 (473)
+..+|+.+|+|++|.++.. +++++..
T Consensus 169 ~~~~F~~~D~d~~G~is~~-~~~~l~~ 194 (198)
T 1juo_A 169 LTDSFRRRDTAQQGVVNFP-YDDFIQC 194 (198)
T ss_dssp HHHHHHHTCTTCCSEEEEE-HHHHHHH
T ss_pred HHHHHHHhCCCCCCeEeec-HHHHHHH
Confidence 8999999999999766654 5555443
No 77
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.56 E-value=2.7e-14 Score=131.29 Aligned_cols=154 Identities=21% Similarity=0.341 Sum_probs=112.2
Q ss_pred chHHHHHHHHHHHhhCCC-CCCCccHHHHhcchh-cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHH
Q psy4132 235 MVVDIRRLGKRFRKLDLD-NSGALSIDEFMSLPE-LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRES 309 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d-~~G~Is~~el~~l~~-~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e 309 (473)
..-..++++.+|+.||.+ ++|.|+.+||..++. ++ ....+..+|..+|.|++|.|+|+||+.++.... .....+
T Consensus 17 t~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~-~~~~~~ 95 (204)
T 1jba_A 17 GAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVL-RGTLEH 95 (204)
T ss_dssp CHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHS-SCCCTH
T ss_pred cCCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHc-cCCHHH
Confidence 345678899999999999 899999999999643 22 223578999999999999999999999998763 445678
Q ss_pred HHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeH
Q psy4132 310 KLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYL 389 (473)
Q Consensus 310 ~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~ 389 (473)
.++.+|+.||.|++|.+...|+..++..+........... ..+..|....+.+++..+|+.+|.|+||.|++
T Consensus 96 ~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~--------~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~ 167 (204)
T 1jba_A 96 KLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEV--------EAEQQGKLLTPEEVVDRIFLLVDENGDGQLSL 167 (204)
T ss_dssp HHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCT--------TSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccc--------cccccCchhhHHHHHHHHHHHhCCCCCCeEcH
Confidence 8999999999999977777544444433321000000000 00111222255677889999999999999999
Q ss_pred Hhhhccce
Q psy4132 390 KTYSSGVK 397 (473)
Q Consensus 390 ~EF~~~~~ 397 (473)
+||...+.
T Consensus 168 ~Ef~~~~~ 175 (204)
T 1jba_A 168 NEFVEGAR 175 (204)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99988765
No 78
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=99.56 E-value=1.3e-15 Score=132.73 Aligned_cols=137 Identities=18% Similarity=0.244 Sum_probs=100.8
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCC--CCCcccHHHHHHHHhhcccC--CC
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDED--RNGEVDFKEFIQGVSQFSVK--GD 306 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d--~dG~I~~~EF~~~l~~~~~~--~~ 306 (473)
+..+...++.+|..+|.+++|+|+.+||..++ .++. ...+..++..+|.+ ++|.|+|+||+.++...... ..
T Consensus 5 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~ 84 (151)
T 1w7j_B 5 NKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQG 84 (151)
T ss_dssp ------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC-----
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCC
Confidence 34567789999999999999999999999853 3332 23578899999999 99999999999999876432 23
Q ss_pred cHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 307 RESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 307 ~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
..+.+..+|+.||.|++|.++.. ++..++. .. | ..++++++..+++.+| |+||.
T Consensus 85 ~~~~l~~~F~~~D~d~~G~I~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~~d-~~dg~ 138 (151)
T 1w7j_B 85 TYEDYLEGFRVFDKEGNGKVMGA---ELRHVLT--------------------TL-G-EKMTEEEVETVLAGHE-DSNGC 138 (151)
T ss_dssp ---CCHHHHHTTCTTSSSEEEHH---HHHHHHH--------------------HS-S-SCCCHHHHHHHHTTCC-CTTSE
T ss_pred cHHHHHHHHHHhCCCCCCcCcHH---HHHHHHH--------------------Hc-C-CCCCHHHHHHHHHhcc-CCCCe
Confidence 45668889999999999655553 3333332 22 2 1488999999999999 99999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+++||...++
T Consensus 139 i~~~eF~~~~~ 149 (151)
T 1w7j_B 139 INYEAFLKHIL 149 (151)
T ss_dssp EEHHHHHHHTC
T ss_pred EeHHHHHHHHh
Confidence 99999987653
No 79
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=99.55 E-value=1.3e-14 Score=124.75 Aligned_cols=131 Identities=18% Similarity=0.218 Sum_probs=99.5
Q ss_pred HHHHHHHHHhhCCCCCCCccHHHHhcch-hccCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCC--CcHHHHHHHh
Q psy4132 239 IRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKG--DRESKLKFAF 315 (473)
Q Consensus 239 ~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~--~~~e~l~~~F 315 (473)
.++++.+|+.+|.|++|+|+.+||..+. .++..+....+...+. +++|.|+|+||+.++....... ...+.++.+|
T Consensus 4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~-~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F 82 (140)
T 1ggw_A 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES-TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGF 82 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT-TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh-CCCCcCcHHHHHHHHHHHhcccCcccHHHHHHHH
Confidence 3468899999999999999999999953 4454444444444444 8999999999999998765432 3458899999
Q ss_pred HHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhcc
Q psy4132 316 RIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSG 395 (473)
Q Consensus 316 ~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~ 395 (473)
+.||.|++|.++..++..++..+ | ..++++++..+++.+|. +||.|+++||...
T Consensus 83 ~~~D~d~~G~i~~~el~~~l~~~------------------------g-~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~ 136 (140)
T 1ggw_A 83 QVFDKDATGMIGVGELRYVLTSL------------------------G-EKLSNEEMDELLKGVPV-KDGMVNYHDFVQM 136 (140)
T ss_dssp HTTCSSCSSCCCHHHHHHHHHHH------------------------H-SCSCHHHHHHHHHHTTC-SSCCSTTTHHHHH
T ss_pred HHhCCCCCCcEeHHHHHHHHHHc------------------------C-CCCCHHHHHHHHHhccC-CCCcEeHHHHHHH
Confidence 99999999655554333333222 1 14889999999999999 9999999999876
Q ss_pred c
Q psy4132 396 V 396 (473)
Q Consensus 396 ~ 396 (473)
+
T Consensus 137 ~ 137 (140)
T 1ggw_A 137 I 137 (140)
T ss_dssp H
T ss_pred H
Confidence 5
No 80
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=99.55 E-value=9.6e-15 Score=129.24 Aligned_cols=135 Identities=23% Similarity=0.320 Sum_probs=101.5
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHH
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESK 310 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~ 310 (473)
...+...++.+|..+|.+++|.|+.+||..+. .++. ...+..++..+|.+++|.|+|.||+.++..... ....+.
T Consensus 22 ~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-~~~~~~ 100 (166)
T 2aao_A 22 SEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNK-IEREDH 100 (166)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHH-HHTTHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhh-cccHHH
Confidence 45677889999999999999999999999853 3332 235889999999999999999999998865422 234567
Q ss_pred HHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHH
Q psy4132 311 LKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLK 390 (473)
Q Consensus 311 l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~ 390 (473)
+..+|+.+|.|++|.+.. .++..++.. . | ++++++..++..+|.|++|.|+++
T Consensus 101 ~~~~F~~~D~d~~G~i~~---~e~~~~l~~--------------------~-~---~~~~~~~~~~~~~d~~~dg~i~~~ 153 (166)
T 2aao_A 101 LFAAFTYFDKDGSGYITP---DELQQACEE--------------------F-G---VEDVRIEELMRDVDQDNDGRIDYN 153 (166)
T ss_dssp HHHHHHHHCTTCSSSBCH---HHHHHHTCC--------------------------------CCHHHHHCTTCSSSBCHH
T ss_pred HHHHHHHhCCCCCCcCcH---HHHHHHHHH--------------------c-C---CCHHHHHHHHHHhCCCCCCcEeHH
Confidence 999999999999955555 344444331 1 2 567778899999999999999999
Q ss_pred hhhccce
Q psy4132 391 TYSSGVK 397 (473)
Q Consensus 391 EF~~~~~ 397 (473)
||...+.
T Consensus 154 eF~~~~~ 160 (166)
T 2aao_A 154 EFVAMMQ 160 (166)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 9987764
No 81
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.54 E-value=2.3e-15 Score=137.11 Aligned_cols=135 Identities=24% Similarity=0.371 Sum_probs=106.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHH
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKL 311 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l 311 (473)
..+...++.+|..+|.|++|.|+.+||..++ .++. ...+..++..+|.|++|.|+|+||+.++.... .....+.+
T Consensus 6 ~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~-~~~~~~~l 84 (188)
T 1s6i_A 6 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLN-KLEREENL 84 (188)
T ss_dssp CTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSS-SSCCCCST
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHh-ccCHHHHH
Confidence 3456679999999999999999999999853 3332 23578999999999999999999999987652 23445678
Q ss_pred HHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHh
Q psy4132 312 KFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKT 391 (473)
Q Consensus 312 ~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~E 391 (473)
+.+|+.||.|++|.++. .|+..++.. .| ++++++..+|+.+|.|+||.|+++|
T Consensus 85 ~~~F~~~D~d~dG~Is~---~El~~~l~~---------------------~g---~~~~~~~~~~~~~D~d~dG~Is~~E 137 (188)
T 1s6i_A 85 VSAFSYFDKDGSGYITL---DEIQQACKD---------------------FG---LDDIHIDDMIKEIDQDNDGQIDYGE 137 (188)
T ss_dssp HHHHHHTTTTCSSEEEH---HHHHHTTTT---------------------TT---CCTTHHHHHHHHHCSSSSSEEETTH
T ss_pred HHHHHHHCCCCCCcCcH---HHHHHHHHH---------------------cC---CCHHHHHHHHHHHCCCCCCcEeHHH
Confidence 99999999999965555 344444331 12 5677899999999999999999999
Q ss_pred hhcccee
Q psy4132 392 YSSGVKV 398 (473)
Q Consensus 392 F~~~~~v 398 (473)
|...+.-
T Consensus 138 F~~~~~~ 144 (188)
T 1s6i_A 138 FAAMMRK 144 (188)
T ss_dssp HHHTTSC
T ss_pred HHHHHHH
Confidence 9988763
No 82
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.54 E-value=1.2e-14 Score=130.56 Aligned_cols=135 Identities=12% Similarity=0.144 Sum_probs=103.7
Q ss_pred hHHHHHHHHHHHhh-CCCCCCCccHHHHhcch-hcc------C-CHHHH-----------HHHHHhcCCCCCcccHHHHH
Q psy4132 236 VVDIRRLGKRFRKL-DLDNSGALSIDEFMSLP-ELQ------Q-NPLVQ-----------RVIDIFDEDRNGEVDFKEFI 295 (473)
Q Consensus 236 ~~~~~~l~~~F~~~-D~d~~G~Is~~el~~l~-~~~------~-~~~~~-----------~l~~~~D~d~dG~I~~~EF~ 295 (473)
....+.++.+|+.+ |.|++|+|+.+||..+. .++ . ...+. .++..+|.|++|.|+++||+
T Consensus 4 ~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~ 83 (185)
T 2sas_A 4 DFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYL 83 (185)
T ss_dssp HHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred HHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHH
Confidence 45678899999999 99999999999998852 222 1 22344 34999999999999999999
Q ss_pred HHHhhcccC--------CCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCC
Q psy4132 296 QGVSQFSVK--------GDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELL 367 (473)
Q Consensus 296 ~~l~~~~~~--------~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~l 367 (473)
.++...... ....+.++.+|+.+|.|++|.++. +|+..++.. .| +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~---~E~~~~l~~---------------------~g---~ 136 (185)
T 2sas_A 84 AMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDL---EEFQNYCKN---------------------FQ---L 136 (185)
T ss_dssp HHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCH---HHHHHHTTS---------------------SC---C
T ss_pred HHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcH---HHHHHHHHH---------------------hC---C
Confidence 998766433 234578899999999999955555 333333321 12 5
Q ss_pred CHHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 368 SPEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 368 s~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
+++++..+|+.+|.|+||.|+++||...+.
T Consensus 137 ~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~ 166 (185)
T 2sas_A 137 QCADVPAVYNVITDGGKVTFDLNRYKELYY 166 (185)
T ss_dssp CCSSHHHHHHHHHTTTTSCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 567789999999999999999999998775
No 83
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=99.54 E-value=1.2e-14 Score=129.54 Aligned_cols=133 Identities=17% Similarity=0.251 Sum_probs=101.9
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc----CCHH----H--------HHHHHHhcCCCCCcccHHHHHHHH
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ----QNPL----V--------QRVIDIFDEDRNGEVDFKEFIQGV 298 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~----~~~~----~--------~~l~~~~D~d~dG~I~~~EF~~~l 298 (473)
..+..+++.+|+.+|.|++|+|+.+||..+. .++ ..+. + +.++..+| ++|.|+|+||+.++
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~ 79 (174)
T 1q80_A 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSM 79 (174)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHH
Confidence 3567889999999999999999999999953 233 2332 2 35677888 89999999999999
Q ss_pred hhcccCC----CcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHH
Q psy4132 299 SQFSVKG----DRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLN 374 (473)
Q Consensus 299 ~~~~~~~----~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~ 374 (473)
....... ...+.++.+|+.+|.|++|.++.. ++...+... | ++++++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~-----------------------e~~~~l~~~-g---~~~~~~~~ 132 (174)
T 1q80_A 80 KEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRD-----------------------EYGIFFGML-G---LDKTMAPA 132 (174)
T ss_dssp HHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHH-----------------------HHHHHHHHH-T---CCGGGHHH
T ss_pred HHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHH-----------------------HHHHHHHHc-C---CCHHHHHH
Confidence 8775422 124778999999999999555553 333333332 3 67778999
Q ss_pred HHHHhccCCCCCeeHHhhhccce
Q psy4132 375 SCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 375 ~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
+|+.+|.|+||.|+++||...++
T Consensus 133 ~~~~~D~d~dg~i~~~ef~~~~~ 155 (174)
T 1q80_A 133 SFDAIDTNNDGLLSLEEFVIAGS 155 (174)
T ss_dssp HHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHhCCCCCceEeHHHHHHHHH
Confidence 99999999999999999998775
No 84
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.54 E-value=4e-14 Score=126.61 Aligned_cols=150 Identities=14% Similarity=0.222 Sum_probs=110.7
Q ss_pred HHHHHHHHHHhhCCCCCCCccHHHHhcch-hc-c----------CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCC
Q psy4132 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLP-EL-Q----------QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKG 305 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~-~----------~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~ 305 (473)
+.++++.+|+.+| +++|.|+.+||..++ .+ + ....+..++..+|.|++|.|+|+||+.++...
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~---- 76 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI---- 76 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH----
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH----
Confidence 4678999999999 999999999999853 22 2 12357899999999999999999999998764
Q ss_pred CcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCC
Q psy4132 306 DRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDS 385 (473)
Q Consensus 306 ~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg 385 (473)
+.++.+|+.||.|++|.+...++..++..+ | ..++++++..++..+| |++|
T Consensus 77 ---~~~~~~F~~~D~d~~G~i~~~el~~~l~~~------------------------g-~~~~~~~~~~~~~~~d-d~dg 127 (173)
T 1alv_A 77 ---KKWQAIYKQFDVDRSGTIGSSELPGAFEAA------------------------G-FHLNEHLYSMIIRRYS-DEGG 127 (173)
T ss_dssp ---HHHHHHHHHHCTTCCSSBCTTTHHHHHHHH------------------------T-CCCCHHHHHHHHHHHT-CSSS
T ss_pred ---HHHHHHHHHHCCCCCCCCCHHHHHHHHHHc------------------------C-CCCCHHHHHHHHHHhc-CCCC
Confidence 789999999999999666554333333222 2 1377888888888888 8899
Q ss_pred CeeHHhhhccceeeeecccCcHHHHHHHHHHHhhC--CCCCHHHHHH
Q psy4132 386 PIYLKTYSSGVKVLQLKSCEDASFVEKTYEIVSQN--VFVTVEQFSR 430 (473)
Q Consensus 386 ~Is~~EF~~~~~vl~~~~~~~~~~~~~~~~~~~~~--~~ls~~e~a~ 430 (473)
.|+++||...+..+ ..+..+++.++.+ |.||.. +.+
T Consensus 128 ~i~~~eF~~~~~~~--------~~~~~~F~~~D~d~~G~i~~~-~~~ 165 (173)
T 1alv_A 128 NMDFDNFISCLVRL--------DAMFRAFKSLDKDGTGQIQVN-IQE 165 (173)
T ss_dssp CBCHHHHHHHHHHH--------HHHHHHHHHHSSSCCSEEEEE-HHH
T ss_pred cCcHHHHHHHHHHH--------HHHHHHHHHhCCCCCCeecHh-HHH
Confidence 99999998766432 2344555555443 456655 444
No 85
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.53 E-value=4.3e-14 Score=122.95 Aligned_cols=129 Identities=24% Similarity=0.381 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccch
Q psy4132 164 ETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMV 236 (473)
Q Consensus 164 ~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~ 236 (473)
+....++++|..+|+ ..++...|+.+|..++.. ++..++.. +|.|++|.|+|+||+.++.... ...
T Consensus 7 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~--~~~~l~~~--~d~~~~g~i~~~eF~~~~~~~~---~~~ 79 (148)
T 1exr_A 7 EQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMINE--VDADGNGTIDFPEFLSLMARKM---KEQ 79 (148)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHH--HHHHHHHH--HCTTCSSSEEHHHHHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHH--HHHHHHHH--HCCCCCCcCcHHHHHHHHHhcc---cCC
Confidence 345679999999998 688888999999888876 56655543 7999999999999999886311 123
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
.....+..+|+.+|++++|+|+.+||+.++ ..+ ....++.++..+|.|++|.|+|+||+.+|.
T Consensus 80 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 80 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 146 (148)
T ss_dssp HHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred CcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 455788999999999999999999999864 333 234689999999999999999999999875
No 86
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=99.53 E-value=2.9e-15 Score=139.83 Aligned_cols=160 Identities=19% Similarity=0.147 Sum_probs=116.3
Q ss_pred ccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-h-ccCCH---HHHHHHHH---
Q psy4132 209 SNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-E-LQQNP---LVQRVIDI--- 280 (473)
Q Consensus 209 ~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~-~~~~~---~~~~l~~~--- 280 (473)
.+.++++++.+.++...+. ......+...++.+|+.+|.|++|+|+.+||..++ . ++..+ .+..++..
T Consensus 21 ~~~~~~~~~~~~~l~~~~~----~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~ 96 (219)
T 3cs1_A 21 GKKAKDRKEAWERIRQAIP----REKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFD 96 (219)
T ss_dssp CCCHHHHHHHHHHHHHHSC----CSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHH
T ss_pred hhhHHhHHHHHHHHHHHhc----ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHH
Confidence 4455677888999888765 33456788899999999999999999999999743 3 33322 23333332
Q ss_pred -----h-cCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHH
Q psy4132 281 -----F-DEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDA 354 (473)
Q Consensus 281 -----~-D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~ 354 (473)
+ +.|++|.|+|.||+.++..... ....+.++.+|+.||.|++|.++..|+..++..+..
T Consensus 97 ~~~~~~~~~d~~g~I~~~EF~~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~-------------- 161 (219)
T 3cs1_A 97 KSRTLGSKLENKGSEDFVEFLEFRLMLCY-IYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEA-------------- 161 (219)
T ss_dssp HHHHHHHHHHTSCCCSSBCHHHHHHHHHH-HHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHH--------------
T ss_pred HHHhhhhccCCCCcCCHHHHHHHHHHHhc-cchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcc--------------
Confidence 2 3488999999999998754421 134577999999999999976666444433332221
Q ss_pred HHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 355 YCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 355 ~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
..++++++..+|+.+|.|+||.|+++||+..+.
T Consensus 162 ----------~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 194 (219)
T 3cs1_A 162 ----------WGAKVEDPAALFKELDKNGTGSVTFDEFAAWAS 194 (219)
T ss_dssp ----------HTCCCSCHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred ----------cCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 026667789999999999999999999987665
No 87
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=99.52 E-value=9.9e-15 Score=128.50 Aligned_cols=129 Identities=14% Similarity=0.230 Sum_probs=104.0
Q ss_pred HhHHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccc
Q psy4132 161 KQKETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHK 233 (473)
Q Consensus 161 ~~~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~ 233 (473)
..+++..+|++||..||+ ..++...|++||.+++.. +...+ +.+++|.|+|++|+.++....
T Consensus 10 Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~--~~~~~------~~~~~~~i~f~ef~~~~~~~~--- 78 (153)
T 3i5g_B 10 LSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDD--ELNAM------LKECPGQLNFTAFLTLFGEKV--- 78 (153)
T ss_dssp CCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHH--HHHHH------HHTSSSCCCSHHHHHTTTTTT---
T ss_pred CCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHH--HHHHH------HHhccCCccHHHHHHHHHhhh---
Confidence 345666789999999999 789999999999999987 44443 335678899999999887432
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
......+.++.+|+.||.|++|+|+.+||+.++ .++. ...++.+++.+|.+ +|.|+|+||+.+|...
T Consensus 79 ~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~ 149 (153)
T 3i5g_B 79 SGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKA 149 (153)
T ss_dssp TTCCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHCS
T ss_pred cccccHHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCC
Confidence 122346789999999999999999999999964 3332 33589999999988 9999999999998653
No 88
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.52 E-value=2e-14 Score=131.65 Aligned_cols=128 Identities=15% Similarity=0.163 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc--------CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCc
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ--------QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDR 307 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~--------~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~ 307 (473)
.+.++++. |..+|.|++|+|+.+||..++ .++ ....++.++..+|.|++|.|+|+||+.++...
T Consensus 30 ~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~------ 102 (198)
T 1juo_A 30 QTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------ 102 (198)
T ss_dssp CCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH------
T ss_pred cccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH------
Confidence 35667888 999999999999999999853 322 22357899999999999999999999988765
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
+.++.+|+.+|.|++|.+...|+..++..+. ..++++++..+++.+ |+||.|
T Consensus 103 -~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g-------------------------~~~~~~~~~~l~~~~--d~dg~i 154 (198)
T 1juo_A 103 -NGWRQHFISFDTDRSGTVDPQELQKALTTMG-------------------------FRLSPQAVNSIAKRY--STNGKI 154 (198)
T ss_dssp -HHHHHHHHTTCTTCCSEECHHHHHHHHHHTT-------------------------CCCCHHHHHHHHHHT--CSSSSE
T ss_pred -HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-------------------------CCCCHHHHHHHHHHh--CCCCeE
Confidence 7899999999999996666644433332221 125555666666665 556666
Q ss_pred eHHhhhccceee
Q psy4132 388 YLKTYSSGVKVL 399 (473)
Q Consensus 388 s~~EF~~~~~vl 399 (473)
+++||...+..+
T Consensus 155 ~~~eF~~~~~~~ 166 (198)
T 1juo_A 155 TFDDYIACCVKL 166 (198)
T ss_dssp EHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 666666555433
No 89
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.51 E-value=7.4e-14 Score=124.11 Aligned_cols=79 Identities=15% Similarity=0.219 Sum_probs=55.8
Q ss_pred HHHHhhCCCCCCCccHHHHhcch-hcc--------CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHH
Q psy4132 244 KRFRKLDLDNSGALSIDEFMSLP-ELQ--------QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFA 314 (473)
Q Consensus 244 ~~F~~~D~d~~G~Is~~el~~l~-~~~--------~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~ 314 (473)
++|..+|.|++|.|+.+||..+. .++ ....++.++..+|.|++|.|+|+||+.++... +.++.+
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~ 77 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGWRQH 77 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH-------HHHHHH
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHHHH
Confidence 45777888888888888887743 222 12246778888888888888888888777654 667778
Q ss_pred hHHhcCCCCchhhHh
Q psy4132 315 FRIYDIDNDDDYYQA 329 (473)
Q Consensus 315 F~~~D~d~dg~~~~~ 329 (473)
|+.+|.|++|.++..
T Consensus 78 F~~~D~d~~G~i~~~ 92 (167)
T 1gjy_A 78 FISFDSDRSGTVDPQ 92 (167)
T ss_dssp HHHHCTTCCSEECHH
T ss_pred HHHhCCCCCCcCCHH
Confidence 888888877555553
No 90
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.51 E-value=6.9e-14 Score=126.98 Aligned_cols=161 Identities=22% Similarity=0.369 Sum_probs=114.6
Q ss_pred CceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCC-CCCCccHHHHhcchh-ccC----CHHHHHHHHHhcCCCCCc
Q psy4132 215 GKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLD-NSGALSIDEFMSLPE-LQQ----NPLVQRVIDIFDEDRNGE 288 (473)
Q Consensus 215 G~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d-~~G~Is~~el~~l~~-~~~----~~~~~~l~~~~D~d~dG~ 288 (473)
++++-.++..+.. ......+++..+|+.||.+ ++|.|+.+||..++. ++. ...+..+|..+|.|++|.
T Consensus 6 s~l~~~~l~~l~~------~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~ 79 (193)
T 1bjf_A 6 SKLRPEVMQDLLE------STDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGT 79 (193)
T ss_dssp CCCCHHHHHHHHH------HSSCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSE
T ss_pred ccCCHHHHHHHHH------HcCCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCc
Confidence 3455555555433 1123456788899999998 899999999999643 222 235789999999999999
Q ss_pred ccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCC--ccchhHHHHHHHhhhCCCC
Q psy4132 289 VDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGG--TMLLTDAYCRINRARGLEL 366 (473)
Q Consensus 289 I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g--~i~l~d~~~~~~~~~g~~~ 366 (473)
|+|.||+.++... ......+.+..+|+.+|.|++|.+... |+..++.......+. .++..+ .
T Consensus 80 i~~~Ef~~~~~~~-~~~~~~~~~~~~f~~~D~d~~G~I~~~---E~~~~~~~~~~~~g~~~~~~~~~------------~ 143 (193)
T 1bjf_A 80 IDFREFIIALSVT-SRGKLEQKLKWAFSMYDLDGNGYISKA---EMLEIVQAIYKMVSSVMKMPEDE------------S 143 (193)
T ss_dssp EEHHHHHHHHHHH-TSSCHHHHHHHHHHHHCTTCSSCEEHH---HHHHHHHHHHTTCCCTTTSCGGG------------S
T ss_pred CcHHHHHHHHHHH-cCCCHHHHHHHHHhhcCCCCCCeECHH---HHHHHHHHHHHHhccccCCCccc------------c
Confidence 9999999999876 345667889999999999999777774 444444332211110 111111 1
Q ss_pred CCHHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 367 LSPEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 367 ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
...+.+..+|+.+|.|+||.|+++||...+.
T Consensus 144 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 174 (193)
T 1bjf_A 144 TPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 174 (193)
T ss_dssp SHHHHHHHHHHHSCTTCSSEECHHHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 2245588999999999999999999998764
No 91
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.50 E-value=2.8e-14 Score=149.86 Aligned_cols=135 Identities=22% Similarity=0.281 Sum_probs=109.3
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hc--------c---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-EL--------Q---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFS 302 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~--------~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~ 302 (473)
...+.++++++|+.+|.|++|.|+.+||..++ .+ + ....++.+|..+|.|++|.|+|+||+.++...
T Consensus 350 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~- 428 (504)
T 3q5i_A 350 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDK- 428 (504)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCH-
T ss_pred cHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhh-
Confidence 45678899999999999999999999998842 22 1 12358899999999999999999999988765
Q ss_pred cCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccC
Q psy4132 303 VKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKL 382 (473)
Q Consensus 303 ~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~ 382 (473)
.....++.++.+|+.||+|++|.++. +|+..++.. ..++++++.++|+.+|.|
T Consensus 429 ~~~~~~~~~~~~F~~~D~d~dG~Is~---~El~~~l~~------------------------~~~~~~~~~~~~~~~D~d 481 (504)
T 3q5i_A 429 QILFSEERLRRAFNLFDTDKSGKITK---EELANLFGL------------------------TSISEKTWNDVLGEADQN 481 (504)
T ss_dssp HHHTCHHHHHHHHHHHCTTCCSEECH---HHHHHHTTC------------------------SCCCHHHHHHHHHTTCSS
T ss_pred hcccCHHHHHHHHHHhcCCCCCcCcH---HHHHHHHhh------------------------CCCCHHHHHHHHHHhCCC
Confidence 33455788999999999999965555 344444431 137899999999999999
Q ss_pred CCCCeeHHhhhccce
Q psy4132 383 PDSPIYLKTYSSGVK 397 (473)
Q Consensus 383 ~dg~Is~~EF~~~~~ 397 (473)
+||.|+++||...++
T Consensus 482 ~dG~I~~~EF~~~~~ 496 (504)
T 3q5i_A 482 KDNMIDFDEFVSMMH 496 (504)
T ss_dssp CSSSEEHHHHHHHHH
T ss_pred CCCcEeHHHHHHHHH
Confidence 999999999988765
No 92
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.50 E-value=5.6e-14 Score=127.27 Aligned_cols=163 Identities=24% Similarity=0.395 Sum_probs=116.5
Q ss_pred CceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCC-CCCCccHHHHhcchh-c---c-CCHHHHHHHHHhcCCCCCc
Q psy4132 215 GKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLD-NSGALSIDEFMSLPE-L---Q-QNPLVQRVIDIFDEDRNGE 288 (473)
Q Consensus 215 G~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d-~~G~Is~~el~~l~~-~---~-~~~~~~~l~~~~D~d~dG~ 288 (473)
++++-+++..+.. ......+++..+|+.||.+ ++|.|+.+||..+.. + + ....+..+|..+|.|++|.
T Consensus 6 ~~l~~~~l~~l~~------~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~ 79 (190)
T 1g8i_A 6 SKLKPEVVEELTR------KTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGR 79 (190)
T ss_dssp CSCCHHHHHHHHH------TSSSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSE
T ss_pred ccCCHHHHHHHHH------ccCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCe
Confidence 3466666666544 1223566788889999988 899999999999533 2 2 2345889999999999999
Q ss_pred ccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCC
Q psy4132 289 VDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLS 368 (473)
Q Consensus 289 I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls 368 (473)
|++.||+.++.... .....+.++.+|+.+|.|++|.+...|+ ..++.......+.....+ .+ +..+
T Consensus 80 i~~~ef~~~~~~~~-~~~~~~~~~~~f~~~D~d~~G~i~~~e~---~~~l~~~~~~~g~~~~~~---------~~-~~~~ 145 (190)
T 1g8i_A 80 IEFSEFIQALSVTS-RGTLDEKLRWAFKLYDLDNDGYITRNEM---LDIVDAIYQMVGNTVELP---------EE-ENTP 145 (190)
T ss_dssp EEHHHHHHHHHHHH-HCCHHHHHHHHHHHHCTTCSSEEEHHHH---HHHHHHHHHHC-----CC---------GG-GSSH
T ss_pred EeHHHHHHHHHHhc-CCCHHHHHHHHHHhhcCCCCCeECHHHH---HHHHHHHHHHhCCccCCc---------cc-cccH
Confidence 99999999988763 3466788999999999999977777544 444433211100000000 00 1366
Q ss_pred HHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 369 PEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 369 ~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
.+++..+|+.+|.|+||.|+++||...+.
T Consensus 146 ~~~~~~~f~~~D~d~dG~i~~~ef~~~~~ 174 (190)
T 1g8i_A 146 EKRVDRIFAMMDKNADGKLTLQEFQEGSK 174 (190)
T ss_dssp HHHHHHHHHHHCSSCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCcEeHHHHHHHHH
Confidence 78899999999999999999999987664
No 93
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.50 E-value=6.7e-14 Score=124.04 Aligned_cols=81 Identities=15% Similarity=0.171 Sum_probs=57.1
Q ss_pred HHHHhhCCCCCCCccHHHHhcch-hcc--------CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHH
Q psy4132 244 KRFRKLDLDNSGALSIDEFMSLP-ELQ--------QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFA 314 (473)
Q Consensus 244 ~~F~~~D~d~~G~Is~~el~~l~-~~~--------~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~ 314 (473)
.+|..+|.|++|.|+.+||..++ .++ ....+..++..+|.+++|.|+|+||+.++... +.++.+
T Consensus 3 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~ 75 (165)
T 1k94_A 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL-------NAWKEN 75 (165)
T ss_dssp HHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HHHHHH
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHH
Confidence 45778888888888888887743 222 12346778888888888888888888777654 667788
Q ss_pred hHHhcCCCCchhhHhhH
Q psy4132 315 FRIYDIDNDDDYYQALG 331 (473)
Q Consensus 315 F~~~D~d~dg~~~~~e~ 331 (473)
|+.||.|++|.+...|+
T Consensus 76 F~~~D~d~~G~i~~~el 92 (165)
T 1k94_A 76 FMTVDQDGSGTVEHHEL 92 (165)
T ss_dssp HHHHCTTCCSBCCHHHH
T ss_pred HHHhCCCCCceECHHHH
Confidence 88888888755555433
No 94
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.50 E-value=7.8e-14 Score=126.31 Aligned_cols=164 Identities=24% Similarity=0.394 Sum_probs=116.5
Q ss_pred CCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCC-CCCCccHHHHhcchh-c----cCCHHHHHHHHHhcCCCCC
Q psy4132 214 DGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLD-NSGALSIDEFMSLPE-L----QQNPLVQRVIDIFDEDRNG 287 (473)
Q Consensus 214 dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d-~~G~Is~~el~~l~~-~----~~~~~~~~l~~~~D~d~dG 287 (473)
.++++-++...+... .....+++..+|+.||.+ ++|.|+.+||..+.. . .....+..+|..+|.|++|
T Consensus 5 ~~~l~~~~l~~l~~~------~~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G 78 (190)
T 1fpw_A 5 TSKLSKDDLTCLKQS------TYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNG 78 (190)
T ss_dssp SCCSTTHHHHHHTTT------CCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSS
T ss_pred cCCCCHHHHHHHHHh------cCCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCC
Confidence 344565665555431 223456677788888876 899999999999643 2 2344688999999999999
Q ss_pred cccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCC
Q psy4132 288 EVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELL 367 (473)
Q Consensus 288 ~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~l 367 (473)
.|++.||+.++.... .....+.+..+|+.+|.|++|.+... |+..++.......+..... ...+..
T Consensus 79 ~i~~~ef~~~~~~~~-~~~~~~~~~~~f~~~D~d~~G~i~~~---ef~~~~~~~~~~~g~~~~~----------~~~~~~ 144 (190)
T 1fpw_A 79 FIHFEEFITVLSTTS-RGTLEEKLSWAFELYDLNHDGYITFD---EMLTIVASVYKMMGSMVTL----------NEDEAT 144 (190)
T ss_dssp EECHHHHHHHHHHHS-CCCSTHHHHHHHHHHCSSCSSEEEHH---HHHHHHHHHHTTSCSTTSS----------SCCCCC
T ss_pred cEeHHHHHHHHHHHc-cCCcHHHHHHHHHHhcCCCCCcCcHH---HHHHHHHHHHHHhccccCc----------ccccch
Confidence 999999999998764 34567889999999999999777764 4444444322111100000 000136
Q ss_pred CHHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 368 SPEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 368 s~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
+.+++..+|+.+|.|+||.|+++||...+.
T Consensus 145 ~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 174 (190)
T 1fpw_A 145 PEMRVKKIFKLMDKNEDGYITLDEFREGSK 174 (190)
T ss_dssp HHHHHHHHHHHHTTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 677899999999999999999999988765
No 95
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.50 E-value=3.2e-14 Score=148.94 Aligned_cols=135 Identities=21% Similarity=0.300 Sum_probs=109.3
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC-----------CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ-----------NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFS 302 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~-----------~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~ 302 (473)
...+.++++++|+.+|.|++|.|+.+||..++ ..+. ...++.+|+.+|.|++|.|+|+||+.++...
T Consensus 341 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~- 419 (494)
T 3lij_A 341 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDR- 419 (494)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCH-
T ss_pred cHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh-
Confidence 46778899999999999999999999999853 3321 2357899999999999999999999998655
Q ss_pred cCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccC
Q psy4132 303 VKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKL 382 (473)
Q Consensus 303 ~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~ 382 (473)
......+.+..+|+.||+|++|.++. +|+..++.. ..++++++.++|+.+|.|
T Consensus 420 ~~~~~~~~~~~~F~~~D~d~~G~Is~---~El~~~l~~------------------------~~~~~~~~~~~~~~~D~d 472 (494)
T 3lij_A 420 KSLLSKDKLESAFQKFDQDGNGKISV---DELASVFGL------------------------DHLESKTWKEMISGIDSN 472 (494)
T ss_dssp HHHTCHHHHHHHHHHHCTTCSSEECH---HHHHHHC-C------------------------CSCCCHHHHHHHHTTCSS
T ss_pred hccccHHHHHHHHHHHCCCCCCcCCH---HHHHHHHHh------------------------cCCCHHHHHHHHHHhCCC
Confidence 33446778999999999999965555 344444431 137888999999999999
Q ss_pred CCCCeeHHhhhccce
Q psy4132 383 PDSPIYLKTYSSGVK 397 (473)
Q Consensus 383 ~dg~Is~~EF~~~~~ 397 (473)
+||.|+++||...++
T Consensus 473 ~dG~I~~~EF~~~~~ 487 (494)
T 3lij_A 473 NDGDVDFEEFCKMIQ 487 (494)
T ss_dssp SSSSEEHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHH
Confidence 999999999988775
No 96
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.49 E-value=7.3e-14 Score=127.74 Aligned_cols=140 Identities=24% Similarity=0.410 Sum_probs=106.3
Q ss_pred HHHHHHHHHHhhCCC-CCCCccHHHHhcch-hccCCH----HHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHH
Q psy4132 238 DIRRLGKRFRKLDLD-NSGALSIDEFMSLP-ELQQNP----LVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKL 311 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d-~~G~Is~~el~~l~-~~~~~~----~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l 311 (473)
..++++.+|+.||.+ ++|.|+.+||..++ .++..+ .+..+|..+|.|++|.|+|.||+.++.... .....+.+
T Consensus 12 ~~~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~-~~~~~~~~ 90 (198)
T 2r2i_A 12 SATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVL-KGKVDQKL 90 (198)
T ss_dssp HTSCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHS-SCCHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHc-cCchHHHH
Confidence 345678899999998 89999999999964 344333 378999999999999999999999998763 44567889
Q ss_pred HHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHH-HHHHHHHhccCCCCCeeHH
Q psy4132 312 KFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPED-LLNSCLALDKLPDSPIYLK 390 (473)
Q Consensus 312 ~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~e-i~~~~~~~D~~~dg~Is~~ 390 (473)
+.+|+.||.|++|.+... |+..++....... .....+++++ +..+|+.+|.|+||.|+++
T Consensus 91 ~~~F~~~D~d~~G~I~~~---Ef~~~~~~~~~~~----------------~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~ 151 (198)
T 2r2i_A 91 RWYFKLYDVDGNGCIDRG---ELLNIIKAIRAIN----------------RCNEAMTAEEFTNMVFDKIDINGDGELSLE 151 (198)
T ss_dssp HHHHHHHCTTCSSCEEHH---HHHHHHHHTTGGG----------------GSSSCCCHHHHHHHHHHHHCTTCSSEECHH
T ss_pred HHHHHHhcCCCCCcCcHH---HHHHHHHHHHhhc----------------CCCchhhHHHHHHHHHHHhCCCCCCcCcHH
Confidence 999999999999766664 4444443221100 0001356555 7889999999999999999
Q ss_pred hhhccce
Q psy4132 391 TYSSGVK 397 (473)
Q Consensus 391 EF~~~~~ 397 (473)
||...+.
T Consensus 152 Ef~~~~~ 158 (198)
T 2r2i_A 152 EFMEGVQ 158 (198)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9988765
No 97
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=99.49 E-value=7e-14 Score=128.19 Aligned_cols=132 Identities=17% Similarity=0.309 Sum_probs=96.1
Q ss_pred HhHHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccc
Q psy4132 161 KQKETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHK 233 (473)
Q Consensus 161 ~~~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~ 233 (473)
...+....++++|..+|. ..++...|..++..++.. ++..++. .+|.|++|.|+|+||+.++...
T Consensus 51 l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~--~~~~l~~--~~D~d~~g~I~~~EF~~~~~~~---- 122 (197)
T 3pm8_A 51 LCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPP--DIHQVLR--DIDSNASGQIHYTDFLAATIDK---- 122 (197)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CH--HHHHHHH--C-------CEEHHHHHHTTCCH----
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHH--HHHHHHH--HhCCCCCCeEcHHHHHHHHHHH----
Confidence 345556789999999998 788888999998877766 5555554 3799999999999999987621
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcchhcc------CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQ------QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~------~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
......+.+..+|+.+|.|++|+|+.+||+.++... ....++.++..+|.|++|.|+|+||+.+|..
T Consensus 123 ~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 123 QTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp HHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred HhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence 223346789999999999999999999999964332 2234789999999999999999999998864
No 98
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.48 E-value=7.2e-14 Score=125.81 Aligned_cols=144 Identities=19% Similarity=0.332 Sum_probs=100.6
Q ss_pred HHHHHHHHhhCC-CCCCCccHHHHhcchh-cc----CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHH
Q psy4132 240 RRLGKRFRKLDL-DNSGALSIDEFMSLPE-LQ----QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKF 313 (473)
Q Consensus 240 ~~l~~~F~~~D~-d~~G~Is~~el~~l~~-~~----~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~ 313 (473)
+++..+|+.||. |++|.|+.+||..+.. .+ ....+..+|..+|.|++|.|+++||+.++.... .....+.++.
T Consensus 18 ~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~-~~~~~~~~~~ 96 (183)
T 1s6c_A 18 RELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILL-RGTVHEKLRW 96 (183)
T ss_dssp HHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH-HCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHc-CCCHHHHHHH
Confidence 344445555555 7899999999999633 22 233578999999999999999999999998763 3456788999
Q ss_pred HhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhh
Q psy4132 314 AFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYS 393 (473)
Q Consensus 314 ~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~ 393 (473)
+|+.+|.|++|.+...|+..++..+..... ....+.+ .+..+.+++..+|+.+|.|+||.|+++||.
T Consensus 97 ~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g----~~~~~~~---------~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~ 163 (183)
T 1s6c_A 97 TFNLYDINKDGYINKEEMMDIVKAIYDMMG----KYTYPVL---------KEDTPRQHVDVFFQKMDKNKDGIVTLDEFL 163 (183)
T ss_dssp HHHHHCTTCSSCEEHHHHHHHHHHHHHHTC------------------------CHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred HHHHhCCCCCCeEcHHHHHHHHHHHHHHhc----cccCcCc---------cHHHHHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence 999999999977777544444333311100 0000000 001334789999999999999999999998
Q ss_pred ccce
Q psy4132 394 SGVK 397 (473)
Q Consensus 394 ~~~~ 397 (473)
..+.
T Consensus 164 ~~~~ 167 (183)
T 1s6c_A 164 ESXQ 167 (183)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 8764
No 99
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.48 E-value=6.2e-14 Score=146.32 Aligned_cols=135 Identities=22% Similarity=0.281 Sum_probs=106.6
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcc----h-hccC----------CHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSL----P-ELQQ----------NPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l----~-~~~~----------~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
...+.+.++++|+.+|.|++|.|+.+||..+ . ..+. ...++.+|+.+|.|++|.|+|+||+.++.
T Consensus 330 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~ 409 (484)
T 3nyv_A 330 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAM 409 (484)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 3566789999999999999999999999552 1 1221 23478999999999999999999999887
Q ss_pred hcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHh
Q psy4132 300 QFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLAL 379 (473)
Q Consensus 300 ~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~ 379 (473)
.. .....++.+..+|+.||+|++|.++.+ |+..++. . ..++++++.++|+.+
T Consensus 410 ~~-~~~~~~~~~~~~F~~~D~d~dG~I~~~---El~~~l~--------------------~----~~~~~~~~~~~~~~~ 461 (484)
T 3nyv_A 410 DR-KTLLSRERLERAFRMFDSDNSGKISST---ELATIFG--------------------V----SDVDSETWKSVLSEV 461 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHCTTCCSEEEHH---HHHHHHH--------------------H----TTCCHHHHHHHHHHH
T ss_pred hc-cccCcHHHHHHHHHHHCCCCCCcCCHH---HHHHHHH--------------------h----cCCCHHHHHHHHHHh
Confidence 65 333456789999999999999666653 4444433 1 137899999999999
Q ss_pred ccCCCCCeeHHhhhccce
Q psy4132 380 DKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 380 D~~~dg~Is~~EF~~~~~ 397 (473)
|.|+||.|+++||...++
T Consensus 462 D~d~dG~i~~~Ef~~~~~ 479 (484)
T 3nyv_A 462 DKNNDGEVDFDEFQQMLL 479 (484)
T ss_dssp CTTCCSEEEHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHH
Confidence 999999999999987764
No 100
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.48 E-value=6.5e-14 Score=129.68 Aligned_cols=139 Identities=27% Similarity=0.440 Sum_probs=100.5
Q ss_pred HHHHHHHHHHhhCCC-CCCCccHHHHhcch-hccCCH----HHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHH
Q psy4132 238 DIRRLGKRFRKLDLD-NSGALSIDEFMSLP-ELQQNP----LVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKL 311 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d-~~G~Is~~el~~l~-~~~~~~----~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l 311 (473)
..++++.+|+.||.+ ++|+|+.+||..++ .++..+ .+..+|..+|.|++|.|+|.||+.++.... .....+.+
T Consensus 17 s~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~-~~~~~~~l 95 (211)
T 2ggz_A 17 PTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIM-QEKMEQKL 95 (211)
T ss_dssp -------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHS-CSSHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhc-cCchHHHH
Confidence 456778899999998 89999999999954 344332 378899999999999999999999998763 34567889
Q ss_pred HHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHH-HHHHHHHhccCCCCCeeHH
Q psy4132 312 KFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPED-LLNSCLALDKLPDSPIYLK 390 (473)
Q Consensus 312 ~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~e-i~~~~~~~D~~~dg~Is~~ 390 (473)
+.+|+.||.|++|.+... |+..++....... +...+++++ +..+|+.+|.|+||.|+++
T Consensus 96 ~~~F~~~D~d~~G~I~~~---E~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~f~~~D~d~dG~I~~~ 155 (211)
T 2ggz_A 96 KWYFKLYDADGNGSIDKN---ELLDMFMAVQALN-----------------GQQTLSPEEFINLVFHKIDINNDGELTLE 155 (211)
T ss_dssp HHHHHHHCTTCSSSBCHH---HHHHHHHHHTTSS-----------------CCCSCTHHHHHHHHHHHHCTTCSSSBCHH
T ss_pred HHHHHHhcCCCCCcCcHH---HHHHHHHHHHhhc-----------------CCccccHHHHHHHHHHHhCCCCCCCCcHH
Confidence 999999999999666664 3333333211100 001355544 7889999999999999999
Q ss_pred hhhccce
Q psy4132 391 TYSSGVK 397 (473)
Q Consensus 391 EF~~~~~ 397 (473)
||...+.
T Consensus 156 Ef~~~~~ 162 (211)
T 2ggz_A 156 EFINGMA 162 (211)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988765
No 101
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.48 E-value=6.9e-14 Score=138.40 Aligned_cols=182 Identities=11% Similarity=0.079 Sum_probs=129.2
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHH
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRES 309 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e 309 (473)
....+...+..+|..+|.|++|+|+..||..++ .++ ....+..++..+|.+++|.|+|.+|+.++. ...
T Consensus 116 Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d~~G~I~f~ef~~l~~-------~~~ 188 (323)
T 1ij5_A 116 LSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVAN-------DLA 188 (323)
T ss_dssp CCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHH-------HHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHhhhh-------HHH
Confidence 456678889999999999999999999999853 232 234688999999999999999999987542 235
Q ss_pred HHHHHhHHhcCCCCchhhHhhHHHHH-----------H-HHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHH
Q psy4132 310 KLKFAFRIYDIDNDDDYYQALGNELI-----------A-ALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCL 377 (473)
Q Consensus 310 ~l~~~F~~~D~d~dg~~~~~e~~el~-----------~-~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~ 377 (473)
.+..+|..||.|++|.++..++..++ . ++.....+.+|.|++.++...+.... .+..+|+
T Consensus 189 ~l~~~F~~~D~d~dG~Is~~El~~~l~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~--------~l~~~F~ 260 (323)
T 1ij5_A 189 ALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL--------VLRILYA 260 (323)
T ss_dssp TSCCCHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHcCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH--------HHHHHHH
Confidence 67778999999999877776665443 2 22223344567777777766665543 5677888
Q ss_pred HhccCCCCCeeHHhhhccc-eeeeecccCcHHHHHHHHHHHh--hCCCCCHHHHHHhh
Q psy4132 378 ALDKLPDSPIYLKTYSSGV-KVLQLKSCEDASFVEKTYEIVS--QNVFVTVEQFSRLA 432 (473)
Q Consensus 378 ~~D~~~dg~Is~~EF~~~~-~vl~~~~~~~~~~~~~~~~~~~--~~~~ls~~e~a~~~ 432 (473)
.+|.|++|.|+.+||...+ ..+.... ++ ..+..++..++ ..|.||..||...+
T Consensus 261 ~~D~d~dG~Is~~El~~~l~~~~g~~l-s~-~e~~~l~~~~D~d~dG~Is~~EF~~~~ 316 (323)
T 1ij5_A 261 FADFDKSGQLSKEEVQKVLEDAHIPES-AR-KKFEHQFSVVDVDDSKSLSYQEFVMLV 316 (323)
T ss_dssp HTCSSSCSSEEHHHHHHHHHHTTCCGG-GC-STHHHHHHHHTTTTCSEECHHHHHHHH
T ss_pred HhCCCCCCCccHHHHHHHHHHHcCCCC-CH-HHHHHHHHHHCCCCCCcEeHHHHHHHH
Confidence 8888888888888888777 5443221 12 22455665554 34678888887654
No 102
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=99.48 E-value=1.6e-14 Score=135.43 Aligned_cols=140 Identities=16% Similarity=0.133 Sum_probs=102.2
Q ss_pred ccchHHHHHHHHHHHhhCCCCCCCccHHHHhc-chhc-cCC---HHHHHHHHHh---------cCCCCCcccHHHHHHHH
Q psy4132 233 KKMVVDIRRLGKRFRKLDLDNSGALSIDEFMS-LPEL-QQN---PLVQRVIDIF---------DEDRNGEVDFKEFIQGV 298 (473)
Q Consensus 233 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~-l~~~-~~~---~~~~~l~~~~---------D~d~dG~I~~~EF~~~l 298 (473)
.....+...++.+|..+|.|++|.|+.+||.. +... +.. ..+..++..+ |.|++|.|+|+||+.++
T Consensus 44 ~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~ 123 (226)
T 2lvv_A 44 DKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFR 123 (226)
T ss_dssp SCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHH
T ss_pred hCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHH
Confidence 44567789999999999999999999999998 5332 222 2344555555 99999999999999964
Q ss_pred hhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHH
Q psy4132 299 SQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLA 378 (473)
Q Consensus 299 ~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~ 378 (473)
.... .....+.+..+|+.||.|++|.++..|+..++..+.. .| ++.+++..+|..
T Consensus 124 ~~~~-~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~---------------------~g---~~~~e~~~~~~~ 178 (226)
T 2lvv_A 124 LMLC-YIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKE---------------------WG---VDITDATTVFNE 178 (226)
T ss_dssp HHHH-HHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHH---------------------HT---CCCCSCHHHHHH
T ss_pred HHHH-hccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhh---------------------cC---CCHHHHHHHHHH
Confidence 3331 1223568999999999999966666444333332211 12 333458899999
Q ss_pred hccCCCCCeeHHhhhccce
Q psy4132 379 LDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 379 ~D~~~dg~Is~~EF~~~~~ 397 (473)
+|.|+||.|+++||+..++
T Consensus 179 ~D~d~dG~Is~~EF~~~~~ 197 (226)
T 2lvv_A 179 IDTNGSGVVTFDEFSCWAV 197 (226)
T ss_dssp HCCSCSSCEEHHHHHHHHH
T ss_pred hCCCCCCcEeHHHHHHHHH
Confidence 9999999999999988775
No 103
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=99.47 E-value=1.3e-13 Score=126.38 Aligned_cols=132 Identities=17% Similarity=0.345 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKM 235 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~ 235 (473)
......++++|..+|+ ..++...|+.++..++.. ++...+. .+|.|++|.|+|+||+.++.. ...
T Consensus 33 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~--~~~~~~~--~~D~d~dg~i~~~ef~~~~~~----~~~ 104 (204)
T 3e3r_A 33 ASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQA--EAEGVCR--KWDRNGSGTLDLEEFLRALRP----PMS 104 (204)
T ss_dssp -------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHH--HHHHHHH--HHCTTCSSSBCHHHHHHHTSC----CCC
T ss_pred chhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHH--HHHHHHH--HhccCCCCcCcHHHHHHHHHh----hcC
Confidence 3445679999999998 788888888888888776 5555554 379999999999999999873 223
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcchhc--------cC---CHHHHHHHHHhcC-CCCCcccHHHHHHHHhhcc
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLPEL--------QQ---NPLVQRVIDIFDE-DRNGEVDFKEFIQGVSQFS 302 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~--------~~---~~~~~~l~~~~D~-d~dG~I~~~EF~~~l~~~~ 302 (473)
......+..+|+.+|.|++|+|+.+||..+... +. ...++.++..+|. |++|.|+|+||+.++..+.
T Consensus 105 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~ 183 (204)
T 3e3r_A 105 QAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVS 183 (204)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcC
Confidence 356678999999999999999999999996432 11 1247889999998 9999999999999998763
No 104
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=99.46 E-value=1.1e-13 Score=119.89 Aligned_cols=129 Identities=12% Similarity=0.194 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHhhCCCC-CCCccHHHHhcc-hhccCC---HHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHH
Q psy4132 237 VDIRRLGKRFRKLDLDN-SGALSIDEFMSL-PELQQN---PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKL 311 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~-~G~Is~~el~~l-~~~~~~---~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l 311 (473)
.+...++.+|..+|.|+ +|.|+.+||..+ ..++.. ..+..++..+|.+ |+|+||+.++..........+.+
T Consensus 11 ~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l 86 (146)
T 2qac_A 11 EEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEEL 86 (146)
T ss_dssp HHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHH
T ss_pred HHHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHH
Confidence 45567899999999999 999999999985 333332 3578899999987 99999999998776666778899
Q ss_pred HHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHh
Q psy4132 312 KFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKT 391 (473)
Q Consensus 312 ~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~E 391 (473)
+.+|+.||.|++|.++.. ++..++. .. | ..++++++..++..+ |+||.|+++|
T Consensus 87 ~~~F~~~D~d~~G~I~~~---el~~~l~--------------------~~-g-~~~~~~~~~~~~~~~--d~dg~i~~~e 139 (146)
T 2qac_A 87 IKMFAHFDNNCTGYLTKS---QMKNILT--------------------TW-G-DALTDQEAIDALNAF--SSEDNIDYKL 139 (146)
T ss_dssp HHHHHTTCTTCSSEEEHH---HHHHHHH--------------------HS-S-SCCCHHHHHHHHHHH--CSSSEEEHHH
T ss_pred HHHHHHhCCCCCCCCCHH---HHHHHHH--------------------Hh-C-CCCCHHHHHHHHHHc--CCCCcCcHHH
Confidence 999999999999655553 3333333 21 2 148899999999999 8999999999
Q ss_pred hhccc
Q psy4132 392 YSSGV 396 (473)
Q Consensus 392 F~~~~ 396 (473)
|...+
T Consensus 140 F~~~l 144 (146)
T 2qac_A 140 FCEDI 144 (146)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
No 105
>1u5t_A Appears to BE functionally related to SNF7; SNF8P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_A
Probab=99.46 E-value=1.3e-13 Score=127.21 Aligned_cols=141 Identities=20% Similarity=0.146 Sum_probs=119.2
Q ss_pred chhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhh-ccceeeeec
Q psy4132 324 DDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYS-SGVKVLQLK 402 (473)
Q Consensus 324 g~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~-~~~~vl~~~ 402 (473)
|-|..++..++.+++......+||+|++.|+++.++++ +.+|++|+..+++.+..- +| |+-|. .+.++++..
T Consensus 89 gdfy~eLavqIvEvC~~tr~~nGGli~l~el~~~~~r~---~~IS~dDi~rAik~L~~L-~g---f~v~~v~g~~~vqsv 161 (233)
T 1u5t_A 89 NDFYYEVCLKVIEICRQTKDMNGGVISFQELEKVHFRK---LNVGLDDLEKSIDMLKSL-EC---FEIFQIRGKKFLRSV 161 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSSCEEHHHHHHTTTTT---TTCCHHHHHHHHHHHTTT-CC---CCEEEETTEEEECCS
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCeeEHHHHHHHHHhh---cCCCHHHHHHHHHHhhhc-cC---eEEEEECCEEEEEeC
Confidence 45666667889999999889999999999999999998 479999999999999876 43 33333 467777777
Q ss_pred ccCcHHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCc--ccccccccccCcc
Q psy4132 403 SCEDASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSI--EGLRFYENKFLLE 471 (473)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~--~g~~~~~n~~~~~ 471 (473)
+......-..++++++..+++|..+++..++|+...|++.|+.++..|.+|||++. ++.+||||.|++.
T Consensus 162 p~el~~D~~~vLe~a~~~g~vt~~~L~~~lgW~~~Ra~~~L~~l~~~G~lwvD~q~~~e~~Yw~P~lf~~~ 232 (233)
T 1u5t_A 162 PNELTSDQTKILEICSILGYSSISLLKANLGWEAVRSKSALDEMVANGLLWIDYQGGAEALYWDPSWITRQ 232 (233)
T ss_dssp SSCCCTTHHHHHHTTTTTSCCBHHHHHHHHCCCSHHHHHHHHHHHHTTSSEEECSSSSSCEEECGGGGGCC
T ss_pred CCccchHHHHHHHHHHhcCcCcHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEeCCCCCccceechhhhhcc
Confidence 66555556777788888899999999999999999999999999999999999977 6788899999854
No 106
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.46 E-value=5.5e-14 Score=146.86 Aligned_cols=137 Identities=19% Similarity=0.288 Sum_probs=96.3
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-----hccC-------------CHHHHHHHHHhcCCCCCcccHHHHHH
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-----ELQQ-------------NPLVQRVIDIFDEDRNGEVDFKEFIQ 296 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-----~~~~-------------~~~~~~l~~~~D~d~dG~I~~~EF~~ 296 (473)
...+.++++++|+.+|.|++|.|+.+||..+. ..+. ...++.+|..+|.|++|.|+|+||+.
T Consensus 326 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~ 405 (486)
T 3mwu_A 326 TLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIA 405 (486)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHH
Confidence 45677899999999999999999999996531 1121 23478999999999999999999999
Q ss_pred HHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHH
Q psy4132 297 GVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSC 376 (473)
Q Consensus 297 ~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~ 376 (473)
++... ......+.+..+|+.||+|++|.++.+|+..++..+ | ..++++++.++|
T Consensus 406 ~~~~~-~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~------------------------g-~~~~~~~~~~~~ 459 (486)
T 3mwu_A 406 SAIDR-TILLSRERMERAFKMFDKDGSGKISTKELFKLFSQA------------------------D-SSIQMEELESII 459 (486)
T ss_dssp HHSCT-TTTCCHHHHHHHHHHHCSSCSSSBCSSCC---------------------------------------------
T ss_pred HHHhh-hccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc------------------------C-CCCCHHHHHHHH
Confidence 88655 334567889999999999999666665443333222 1 137788899999
Q ss_pred HHhccCCCCCeeHHhhhccce
Q psy4132 377 LALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 377 ~~~D~~~dg~Is~~EF~~~~~ 397 (473)
+.+|.|+||.|+++||...+.
T Consensus 460 ~~~D~d~dG~I~~~EF~~~~~ 480 (486)
T 3mwu_A 460 EQVDNNKDGEVDFNEFVEMLQ 480 (486)
T ss_dssp CCCCSSCSSSBCHHHHHHHHH
T ss_pred HHhCCCCCCcEeHHHHHHHHH
Confidence 999999999999999987664
No 107
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.46 E-value=2.1e-13 Score=118.38 Aligned_cols=133 Identities=20% Similarity=0.384 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccc-c
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHK-K 234 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~-~ 234 (473)
.+....++++|..+|. ..++...|..++..++.. ++...+.. +|.+++|.|+|+||+.++....... .
T Consensus 7 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~--~~~~l~~~--~d~~~~g~i~~~eF~~~~~~~~~~~~~ 82 (153)
T 3ox6_A 7 PEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEM--ELIELSQQ--INMNLGGHVDFDDFVELMGPKLLAETA 82 (153)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHH--HHHHHHHH--HHTTSTTCCCHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHH--HHHHHHHH--hCCCCCccCcHHHHHHHHHHHhhcccc
Confidence 3445679999999998 688888899998888776 55555543 7899999999999999886322111 1
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcchh--cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE--LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~--~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
.......+..+|+.+|.+++|+|+.+||+.+.. .+ ....++.++..+|.|++|.|+|+||+.++.
T Consensus 83 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 83 DMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 122367899999999999999999999999643 33 234588999999999999999999998764
No 108
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.46 E-value=1.5e-13 Score=128.68 Aligned_cols=163 Identities=17% Similarity=0.250 Sum_probs=107.7
Q ss_pred CceeHHHHHHHHccccccccchHHHHHHHHHHHhhCC-CCCCCccHHHHhcchh-cc----CCHHHHHHHHHhcCCCCCc
Q psy4132 215 GKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDL-DNSGALSIDEFMSLPE-LQ----QNPLVQRVIDIFDEDRNGE 288 (473)
Q Consensus 215 G~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~-d~~G~Is~~el~~l~~-~~----~~~~~~~l~~~~D~d~dG~ 288 (473)
+.++-+++..++... ....+++..+|+.||. +++|.|+.+||..++. ++ ....+..+|+.+|.|++|.
T Consensus 32 ~~l~~~~l~~l~~~~------~~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~ 105 (224)
T 1s1e_A 32 VCHRPEGLEQLEAQT------NFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 105 (224)
T ss_dssp ------CHHHHHHHS------SCCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSC
T ss_pred cCCCHHHHHHHHHHc------CCCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCc
Confidence 446656655554411 1234455556666665 4899999999999643 22 2235789999999999999
Q ss_pred ccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCC
Q psy4132 289 VDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLS 368 (473)
Q Consensus 289 I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls 368 (473)
|+|+||+.++.... ....++.++.+|+.||.|++|.+...| +..++.......+.. ..+. . .+..+
T Consensus 106 I~~~Ef~~~l~~~~-~~~~~~~l~~~F~~~D~d~dG~Is~~E---~~~~l~~~~~~~g~~-~~~~-------~--~~~~~ 171 (224)
T 1s1e_A 106 VKFEDFVTALSILL-RGTVHEKLRWTFNLYDINKDGYINKEE---MMDIVKAIYDMMGKY-TYPV-------L--KEDTP 171 (224)
T ss_dssp BCHHHHHHHHHHHH-HCCHHHHHHHHHHHHCTTCCSEECHHH---HHHHHHHHHHHHTTC-CCGG-------G--CSSSH
T ss_pred EeHHHHHHHHHHHc-cCCHHHHHHHHHHHHcCCCCCeECHHH---HHHHHHHHHHHhccc-CCCC-------C--CHhHH
Confidence 99999999998764 345678899999999999997777644 444443321100000 0000 0 01133
Q ss_pred HHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 369 PEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 369 ~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
.+++..+|+.+|.|+||.|+++||...++
T Consensus 172 ~~~~~~~f~~~D~d~dG~Is~~EF~~~~~ 200 (224)
T 1s1e_A 172 RQHVDVFFQKMDKNKDGIVTLDEFLESCQ 200 (224)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 57789999999999999999999987764
No 109
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.46 E-value=2e-13 Score=128.20 Aligned_cols=146 Identities=21% Similarity=0.354 Sum_probs=104.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcchhc-c----CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHH
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLPEL-Q----QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESK 310 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~-~----~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~ 310 (473)
..+...+...|.. .+++|.|+.+||+.+... . ....++.+|+.+|.|++|.|+|+||+.++.... ....++.
T Consensus 63 ~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~-~~~~~~~ 139 (229)
T 3dd4_A 63 KKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILL-RGTVQEK 139 (229)
T ss_dssp HHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHH-HSCHHHH
T ss_pred HHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHc-CCChHHH
Confidence 4455566666655 678899999999996432 1 123478999999999999999999999998774 4556789
Q ss_pred HHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHH
Q psy4132 311 LKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLK 390 (473)
Q Consensus 311 l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~ 390 (473)
++.+|+.||.|++|.++..|+..++..+.. ..+.. ..+. .+ +.++++++..+|+.+|.|+||.|+++
T Consensus 140 l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~---~~~~~-~~~~--------~~-~~~~~~~~~~~f~~~D~d~dG~Is~~ 206 (229)
T 3dd4_A 140 LNWAFNLYDINKDGYITKEEMLDIMKAIYD---MMGKC-TYPV--------LK-EDAPRQHVETFFQKMDKNKDGVVTID 206 (229)
T ss_dssp HHHHHHHHCTTCSSCCBHHHHHHHHHHHHH---HCC---------------------CCTHHHHHHHHHCSSCSSBCCHH
T ss_pred HHHHHHHhCCCCCCeECHHHHHHHHHHHHH---Hhccc-cCCC--------cc-hhhHHHHHHHHHHHhcCCCCCcEeHH
Confidence 999999999999977777544444433321 11100 0000 01 13667789999999999999999999
Q ss_pred hhhccce
Q psy4132 391 TYSSGVK 397 (473)
Q Consensus 391 EF~~~~~ 397 (473)
||...++
T Consensus 207 EF~~~~~ 213 (229)
T 3dd4_A 207 EFIESCQ 213 (229)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998775
No 110
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=99.45 E-value=4.3e-13 Score=117.81 Aligned_cols=133 Identities=12% Similarity=0.202 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHhhh--h-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccc
Q psy4132 163 KETSSNINNAFKDLN--Q-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHK 233 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD--~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~ 233 (473)
++....++++|..+| + ..++...|+.+|..++.. ++..++.. +|. ++|.|+|+||+.++.... ..
T Consensus 5 ~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~lg~~~~~~--~~~~l~~~--~d~-~~g~i~~~eF~~~~~~~~-~~ 78 (159)
T 2ovk_C 5 KDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEA--QVHQHGGT--KKM-GEKAYKLEEILPIYEEMS-SK 78 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSEEEGGGHHHHHHHTTCCCCHH--HHHHTTCC--SST-TSCEEEHHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHcCCCCCHH--HHHHHHHH--hcC-CCCeEcHHHHHHHHHHHh-hc
Confidence 345568999999999 6 789999999999998877 66666654 565 469999999999884211 11
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHH--HhcCCCCCcccHHHHHHHHhhc
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVID--IFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~--~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
......+.++.+|+.+|.+++|+|+.+||+.++ ..+ ....++.++. .+|.|++|.|+|+||+.++...
T Consensus 79 ~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 152 (159)
T 2ovk_C 79 DTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp STTCCHHHHHHHHHHTCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHHHHHHHC
T ss_pred cCCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHHHHHhcC
Confidence 223456789999999999999999999999964 333 2345889999 8899999999999999998765
No 111
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=99.45 E-value=2.6e-13 Score=122.62 Aligned_cols=140 Identities=16% Similarity=0.112 Sum_probs=103.4
Q ss_pred HHHHHHHHHHhhCCCCCCCccHHHHhcchhccCC-HHHHHHHHHhc---CCCCCcccHHHHHHHHhhcccCCCcHHHHHH
Q psy4132 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQN-PLVQRVIDIFD---EDRNGEVDFKEFIQGVSQFSVKGDRESKLKF 313 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~~-~~~~~l~~~~D---~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~ 313 (473)
+..+++++|..+| ++|+|+.+||..++..... ..+..++..+| .+++|.|+|.||..++..+. .....+.++.
T Consensus 26 ~~~~~~~~F~~~D--~dG~I~~~el~~~lg~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~-~~~~~~~l~~ 102 (179)
T 3a8r_A 26 GWAAVEKRFNQLQ--VDGVLLRSRFGKCIGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLT-DQGFDNRLRT 102 (179)
T ss_dssp CHHHHHHHHHHHC--BTTBEEGGGHHHHHTCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHH-CCCHHHHHHH
T ss_pred hHHHHHHHHhccC--CCCCCcHHHHHHHHCCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHc-CCCHHHHHHH
Confidence 4678889999999 8999999999986543323 35778888887 56789999999999887653 3567789999
Q ss_pred HhHHhcCCCCchhhHhhHHHHHH-HHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhh
Q psy4132 314 AFRIYDIDNDDDYYQALGNELIA-ALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTY 392 (473)
Q Consensus 314 ~F~~~D~d~dg~~~~~e~~el~~-~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF 392 (473)
+|+.||+|++|.++..|+..++. .+... .+... . ..+.+++..+++.+|.|+||.|+++||
T Consensus 103 ~F~~~D~d~dG~Is~~El~~~l~~~~g~~--------~~~~~-------~---~~~~~~~~~~~~~~D~d~dG~I~~~EF 164 (179)
T 3a8r_A 103 FFDMVDKNADGRLTAEEVKEIIALSASAN--------KLSKI-------K---ERADEYTALIMEELDPTNLGYIEMEDL 164 (179)
T ss_dssp HHHHHCTTCSSCBCHHHHHHHHHHHHHTT--------HHHHH-------H---HHHHHHHHHHHHHHSTTCCSEECHHHH
T ss_pred HHHHHCCCCCCcCCHHHHHHHHHHHhccc--------ccccc-------c---cchHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 99999999997777644444333 22100 00000 0 025678899999999999999999999
Q ss_pred hcccee
Q psy4132 393 SSGVKV 398 (473)
Q Consensus 393 ~~~~~v 398 (473)
...+..
T Consensus 165 ~~~~~~ 170 (179)
T 3a8r_A 165 EALLLQ 170 (179)
T ss_dssp HHHHC-
T ss_pred HHHHHh
Confidence 987753
No 112
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.45 E-value=5.1e-13 Score=120.15 Aligned_cols=153 Identities=14% Similarity=0.094 Sum_probs=101.9
Q ss_pred ccCCCCCceeHHHHHHHHcccccc--ccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchhccCCHHHHHHHHHhcCCCC
Q psy4132 209 SNKDRDGKINFQEFCSIVGNTDIH--KKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRN 286 (473)
Q Consensus 209 ~D~d~dG~I~f~EF~~~~~~~~~~--~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~~~~~~~l~~~~D~d~d 286 (473)
-+.|++|.|+.+|+..++..-... .......+.+..+|..+|.|++|.|+.+||..+.... ..+..+|+.+| |++
T Consensus 13 ~~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~--~~l~~aF~~fD-d~~ 89 (174)
T 2i7a_A 13 GLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL--VHYQHVFQKVQ-TSP 89 (174)
T ss_dssp CSCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH--HHHHHHHHHHC-SBT
T ss_pred ccCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH--HHHHHHHHHhc-CCC
Confidence 467889999999998887631000 0112335677788888888888888888888754321 34667888888 888
Q ss_pred CcccHHHHHHHHhhcc---cCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhC
Q psy4132 287 GEVDFKEFIQGVSQFS---VKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARG 363 (473)
Q Consensus 287 G~I~~~EF~~~l~~~~---~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g 363 (473)
|.|+.+|+..++..+. .....++.+..+++.+| |++|.+.. .|+...+.+.
T Consensus 90 G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~-----------------------~EF~~~~~~~-- 143 (174)
T 2i7a_A 90 GVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSF-----------------------PSLVCFLMRL-- 143 (174)
T ss_dssp TBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECH-----------------------HHHHHHHHHH--
T ss_pred CcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcH-----------------------HHHHHHHHHH--
Confidence 8888888888887651 23345667777888887 66644433 3333333221
Q ss_pred CCCCCHHHHHHHHHHhccCCCC-CeeHHhhhccc
Q psy4132 364 LELLSPEDLLNSCLALDKLPDS-PIYLKTYSSGV 396 (473)
Q Consensus 364 ~~~ls~~ei~~~~~~~D~~~dg-~Is~~EF~~~~ 396 (473)
+.+.++|+.+|++++| .++++||+.++
T Consensus 144 ------~~~~~~F~~~D~d~~GI~~~~~Ef~~~~ 171 (174)
T 2i7a_A 144 ------EAMAKTFRNLSKDGKGLYLTEMEWMSLV 171 (174)
T ss_dssp ------HHHHHHHHHHCSSSSCCCCCHHHHHHHH
T ss_pred ------HHHHHHHHHhCCCCCCceecHHHHHHHH
Confidence 3467788888888888 34788887654
No 113
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.45 E-value=2.2e-13 Score=148.50 Aligned_cols=153 Identities=20% Similarity=0.298 Sum_probs=125.1
Q ss_pred HHHHHHHHHhhhh------hhhHHHHHHHH--------hhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccc
Q psy4132 166 SSNINNAFKDLNQ------LMSMAKEMVEI--------SKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDI 231 (473)
Q Consensus 166 ~~~l~eaF~~lD~------~~e~~~~l~~l--------g~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~ 231 (473)
..+++++|..+|. ..++...|..+ +..++.. +...++.. +|.|++|.|+|+||+.++.
T Consensus 531 ~~~l~~~F~~~Dd~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~--~~~~l~~~--~D~d~~G~I~f~EF~~l~~---- 602 (714)
T 3bow_A 531 GDGFRRLFAQLAGEDAEISAFELQTILRRVLAKREDIKSDGFSIE--TCKIMVDM--LDEDGSGKLGLKEFYILWT---- 602 (714)
T ss_dssp CHHHHHHHHHHHGGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHH--HHHHHHHH--HCCSSCSSBCHHHHHHHHH----
T ss_pred HHHHHHHHHHHcCCCCcCCHHHHHHHHHHHhhhcccccCCCCCHH--HHHHHHHH--hCCCCCCcCcHHHHHHHHH----
Confidence 5679999998885 57777788876 5556655 55555543 7999999999999999987
Q ss_pred cccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCc
Q psy4132 232 HKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDR 307 (473)
Q Consensus 232 ~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~ 307 (473)
..+.++.+|+.+|.|++|+|+.+||+.++ ..+ ....++.++..+| |++|.|+|+||+.++...
T Consensus 603 ------~~~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~------ 669 (714)
T 3bow_A 603 ------KIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL------ 669 (714)
T ss_dssp ------HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHHH------
T ss_pred ------HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH------
Confidence 34789999999999999999999999854 222 3346899999999 999999999999999765
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhc
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIE 340 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~ 340 (473)
+.+..+|+.+|+|++|.++..+++.+...|..
T Consensus 670 -~~l~~~F~~~D~d~dG~Is~~el~~l~~~~~~ 701 (714)
T 3bow_A 670 -EILFKIFKQLDPENTGTIQLDLISWLSFSVLG 701 (714)
T ss_dssp -HHHHHHHSSSCSSCCSEEEEEHHHHHHHHHHC
T ss_pred -HHHHHHHHHhCCCCCCcEEHHHHHHHHHHHHH
Confidence 68899999999999987877777777766654
No 114
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.44 E-value=3.4e-13 Score=119.51 Aligned_cols=130 Identities=24% Similarity=0.363 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccch
Q psy4132 164 ETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMV 236 (473)
Q Consensus 164 ~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~ 236 (473)
+....++++|..+|. ..++...|..++..++.. ++...+. .+|.|++|.|+|+||+.++.... ...
T Consensus 25 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~--~~~~~~~--~~d~~~~g~i~~~eF~~~~~~~~---~~~ 97 (169)
T 3qrx_A 25 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKE--EIKKMIS--EIDKDGSGTIDFEEFLTMMTAKM---GER 97 (169)
T ss_dssp HHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHH--HHHHHHH--HHCSSSSSSEEHHHHHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHH--HHHHHHH--HhcCCCCCcCCHHHHHHHHHHHh---ccc
Confidence 445679999999998 788888899998887766 5555554 37999999999999999887211 123
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
.....+..+|+.+|.+++|+|+.+||+.+.. .+ ....++.++..+|.|++|.|+|+||+.++..
T Consensus 98 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 98 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred CcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 3467889999999999999999999999643 32 2345889999999999999999999998864
No 115
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=99.44 E-value=5.4e-13 Score=121.55 Aligned_cols=128 Identities=21% Similarity=0.343 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHcccccccc
Q psy4132 162 QKETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKK 234 (473)
Q Consensus 162 ~~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~ 234 (473)
..+....++++|..+|. ..++...|+.+|..++ . +....+. .+|.|++|.|+|+||+.++....
T Consensus 47 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~--~~~~l~~--~~D~d~~g~i~~~EF~~~~~~~~---- 117 (191)
T 3k21_A 47 NDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-Y--NFDLLLD--QIDSDGSGKIDYTEFIAAALDRK---- 117 (191)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-T--THHHHHH--HHCTTCSSSEEHHHHHHHHSCGG----
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-H--HHHHHHH--HhCCCCCCeEeHHHHHHHHHhhh----
Confidence 34556789999999988 7788888888887776 3 4444444 37889999999999999876321
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcchhc---cCC------HHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPEL---QQN------PLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~---~~~------~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
....+.+..+|+.+|.|++|+|+.+||+.+... +.. ..+..++..+|.|++|.|+|+||+.+|.
T Consensus 118 -~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 118 -QLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp -GCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred -hccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 245678889999999999999999999986432 111 2478899999999999999999998774
No 116
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.43 E-value=3.6e-13 Score=118.15 Aligned_cols=130 Identities=18% Similarity=0.348 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKM 235 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~ 235 (473)
.+....++++|..+|. ..++...++.++..++.. ++...+. .+|.+++|.|+|+||+.++.... ..
T Consensus 19 ~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~--~~~~l~~--~~d~~~~g~i~~~eF~~~~~~~~---~~ 91 (161)
T 3fwb_A 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKR--EILDLID--EYDSEGRHLMKYDDFYIVMGEKI---LK 91 (161)
T ss_dssp HHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHH--HHHHHHH--HHCTTSSSCEEHHHHHHHHHHHH---HT
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHH--HHHHHHH--HhCcCCCCeEeHHHHHHHHHHHH---hc
Confidence 4455679999999998 688888899998888776 5555554 37999999999999999887321 12
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
......+..+|+.+|.+++|+|+.+||+.+.. .+ ....++.++..+|.|++|.|+|+||+.++.
T Consensus 92 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 159 (161)
T 3fwb_A 92 RDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICT 159 (161)
T ss_dssp CCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 23467899999999999999999999999643 33 234588999999999999999999999875
No 117
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.43 E-value=1.7e-13 Score=115.93 Aligned_cols=126 Identities=22% Similarity=0.361 Sum_probs=94.8
Q ss_pred HHHHHHhhCCCCCCCccHHHHhcch-hccCC---HHHHHHHHHhcCCCCCcccHHHHHHHHhhcc--cCCCcHHHHHHHh
Q psy4132 242 LGKRFRKLDLDNSGALSIDEFMSLP-ELQQN---PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFS--VKGDRESKLKFAF 315 (473)
Q Consensus 242 l~~~F~~~D~d~~G~Is~~el~~l~-~~~~~---~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~--~~~~~~e~l~~~F 315 (473)
++.+|..+|.+++|.|+.+||..+. ..+.. ..+..+++.+|.+++|.|+++||+.++..+. ......+.++.+|
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f 81 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence 6789999999999999999999854 33322 3478899999999999999999999885321 1122345689999
Q ss_pred HHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhcc
Q psy4132 316 RIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSG 395 (473)
Q Consensus 316 ~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~ 395 (473)
+.+|.|++|.++. +++..++.. . | . +. +..+|..+|.|+||.|+++||...
T Consensus 82 ~~~D~d~~G~i~~---~e~~~~l~~--------------------~-~---~-~~-~~~~~~~~D~~~dg~i~~~ef~~~ 132 (134)
T 1jfj_A 82 KLMDVDGDGKLTK---EEVTSFFKK--------------------H-G---I-EK-VAEQVMKADANGDGYITLEEFLEF 132 (134)
T ss_dssp HHHCCSSSSEEEH---HHHHHHHTT--------------------T-T---C-HH-HHHHHHHHHCSSSSEEEHHHHHHH
T ss_pred HHHCCCCCCccCH---HHHHHHHHH--------------------h-C---H-HH-HHHHHHHhCCCCCCcEeHHHHHHH
Confidence 9999999965555 344444432 1 1 1 11 778899999999999999999865
Q ss_pred c
Q psy4132 396 V 396 (473)
Q Consensus 396 ~ 396 (473)
+
T Consensus 133 l 133 (134)
T 1jfj_A 133 S 133 (134)
T ss_dssp H
T ss_pred h
Confidence 4
No 118
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=99.42 E-value=9e-13 Score=115.71 Aligned_cols=137 Identities=18% Similarity=0.321 Sum_probs=105.9
Q ss_pred HhHHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccc
Q psy4132 161 KQKETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHK 233 (473)
Q Consensus 161 ~~~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~ 233 (473)
...+....++++|..+|. ..++...+..++..++.. ++...+. .+|.+++|.|+|+||+.++.......
T Consensus 14 ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~--~~~~~~~--~~d~~~~g~i~~~ef~~~~~~~~~~~ 89 (162)
T 1top_A 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE--ELDAIIE--EVDEDGSGTIDFEEFLVMMVRQMKED 89 (162)
T ss_dssp SCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHH--HHHHHHH--HHCTTSCCEEEHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHH--HHHHHHH--HHcCCCCCcEeHHHHHHHHHHHhccc
Confidence 334556789999999997 788889999998887766 5555554 37899999999999999886321111
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
........+..+|+.+|.+++|+|+.+||+.+. ..+ ....+..++..+|.|++|.|+|+||+.++..+
T Consensus 90 ~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 161 (162)
T 1top_A 90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence 111256788999999999999999999999854 333 23458899999999999999999999988643
No 119
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.42 E-value=6.4e-13 Score=116.64 Aligned_cols=135 Identities=18% Similarity=0.317 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHhhhh--------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHcccccccc
Q psy4132 163 KETSSNINNAFKDLNQ--------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKK 234 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~--------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~ 234 (473)
.+....++++|..+|. ..++...|..++..++.. ++...+. .+|.|++|.|+|+||+.++........
T Consensus 14 ~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~--~~~~~~~--~~D~~~~g~i~~~eF~~~~~~~~~~~~ 89 (161)
T 1dtl_A 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPE--ELQEMID--EVDEDGSGTVDFDEFLVMMVRSMKDDS 89 (161)
T ss_dssp HHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHH--HHHHHHH--HHCTTSSSSBCHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHH--HHHHHHH--HhCCCCCCeEcHHHHHHHHHHHhcccc
Confidence 3445679999999985 567778888888877766 5555554 379999999999999998873221001
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.......+..+|+.+|.|++|+|+.+||+.+.. .+ ....++.++..+|.|++|.|+|+||+.++..+
T Consensus 90 ~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 160 (161)
T 1dtl_A 90 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160 (161)
T ss_dssp --CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred cchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcC
Confidence 234567799999999999999999999999643 32 23358899999999999999999999988643
No 120
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.41 E-value=2.8e-13 Score=122.94 Aligned_cols=148 Identities=18% Similarity=0.268 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHhhhh--------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHcccccccc
Q psy4132 163 KETSSNINNAFKDLNQ--------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKK 234 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~--------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~ 234 (473)
.-+..+++++|..||+ ..++...+..++...... ......+. .+|.|++|.|++.||..++... .
T Consensus 21 ~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~-~~~~~~f~--~~D~d~~g~i~~~Ef~~~~~~~----~ 93 (193)
T 1bjf_A 21 DFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDAS-KFAEHVFR--TFDANGDGTIDFREFIIALSVT----S 93 (193)
T ss_dssp SCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCH-HHHHHHHH--HHCSSCSSEEEHHHHHHHHHHH----T
T ss_pred CCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChH-HHHHHHHH--HhCCCCCCcCcHHHHHHHHHHH----c
Confidence 3445678888888875 345555555554433211 01222333 3788899999999998877621 1
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcchhc-----c-----CC------HHHHHHHHHhcCCCCCcccHHHHHHHH
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPEL-----Q-----QN------PLVQRVIDIFDEDRNGEVDFKEFIQGV 298 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~-----~-----~~------~~~~~l~~~~D~d~dG~I~~~EF~~~l 298 (473)
.......+..+|+.+|.|++|+|+.+||..+... + .. ..+..+|..+|.|++|.|+++||+.++
T Consensus 94 ~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 173 (193)
T 1bjf_A 94 RGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGA 173 (193)
T ss_dssp SSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHH
T ss_pred CCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence 1234567888999999999999999999885321 2 01 137788999999999999999999888
Q ss_pred hhcccCCCcHHHHHHHhHHhcCCCCch
Q psy4132 299 SQFSVKGDRESKLKFAFRIYDIDNDDD 325 (473)
Q Consensus 299 ~~~~~~~~~~e~l~~~F~~~D~d~dg~ 325 (473)
.. .+.+..+| .+|+|++|.
T Consensus 174 ~~-------~~~~~~~~-~~D~~~dG~ 192 (193)
T 1bjf_A 174 KS-------DPSIVRLL-QCDPSSAGQ 192 (193)
T ss_dssp HH-------CTHHHHTT-CC-------
T ss_pred hc-------CHHHHHHh-ccCCCCCCC
Confidence 53 35677778 888888853
No 121
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.41 E-value=4.6e-13 Score=119.98 Aligned_cols=131 Identities=24% Similarity=0.387 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccch
Q psy4132 164 ETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMV 236 (473)
Q Consensus 164 ~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~ 236 (473)
+....++++|..+|. ..++...|..++..++.. ++...+. .+|.|++|.|+|+||+.++.... ...
T Consensus 8 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~--~~~~l~~--~~D~~~~g~i~~~EF~~~~~~~~---~~~ 80 (179)
T 2f2o_A 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMIN--EVDADGNGTIDFPEFLTMMARKM---KDT 80 (179)
T ss_dssp SHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHH--HHHHHHH--HHCTTCSSSBCHHHHHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHH--HHHHHHH--HhccCCCCCCcHHHHHHHHHHHc---cCc
Confidence 345679999999998 678888888988888766 5555554 37999999999999999876211 123
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.....+..+|+.+|.|++|+|+.+||+.+. ..+ ....++.++..+|.|++|.|+|+||+.++...
T Consensus 81 ~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 149 (179)
T 2f2o_A 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149 (179)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC-
T ss_pred ccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHc
Confidence 455679999999999999999999999954 332 23458899999999999999999999998765
No 122
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.41 E-value=2.3e-13 Score=117.03 Aligned_cols=126 Identities=17% Similarity=0.323 Sum_probs=98.7
Q ss_pred HHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchH
Q psy4132 165 TSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVV 237 (473)
Q Consensus 165 ~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~ 237 (473)
....++++|..+|+ ..++...|+.++..++.. ++..++. .+|.+++|.|+|+||+.++.... ....
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~--~~~~l~~--~~d~~~~g~i~~~eF~~~~~~~~---~~~~ 76 (142)
T 2bl0_C 4 QVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPA--AFNEMFN--EADATGNGKIQFPEFLSMMGRRM---KQTT 76 (142)
T ss_dssp HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHH--HHHHHHH--HHCTTCSSEEEHHHHHHHHHHHH---TTCC
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHH--HHHHHHH--HhCcCCCCeeeHHHHHHHHHHHh---cCCC
Confidence 45679999999987 678888888888888766 5555554 37889999999999999887311 1123
Q ss_pred HHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHH
Q psy4132 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGV 298 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l 298 (473)
....+..+|+.+|.+++|+|+.+||+.+.. .+ ....++.++..+| |++|.|+|+||+.++
T Consensus 77 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~ 140 (142)
T 2bl0_C 77 SEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTM 140 (142)
T ss_dssp CHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTT
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHH
Confidence 567889999999999999999999998643 32 2335789999999 999999999998765
No 123
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.40 E-value=1.1e-12 Score=118.54 Aligned_cols=131 Identities=21% Similarity=0.415 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHH-----------hhhhhhhhhhhhcccccccccCCCCCceeHHHHHH
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEI-----------SKNISNKIINRQGEITEDDSNKDRDGKINFQEFCS 224 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~l-----------g~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~ 224 (473)
++....++++|..+|. ..++...|..+ +..++.. ++...+. .+|.|++|.|+|+||+.
T Consensus 36 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~D~d~~g~i~~~ef~~ 111 (191)
T 3khe_A 36 LEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEA--EVDHILQ--SVDFDRNGYIEYSEFVT 111 (191)
T ss_dssp TTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHH--HHHHHHH--HTCTTCSSSEEHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHH--HHHHHHH--HhCCCCCCcCCHHHHHH
Confidence 4455678889998887 66777777776 5555554 4444443 37888889999999988
Q ss_pred HHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchhc--cCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 225 IVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPEL--QQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 225 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~--~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
++... ......+.+..+|+.+|.|++|+|+.+||+.+... .....++.++..+|.|++|.|+|+||+.++..+
T Consensus 112 ~~~~~----~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 186 (191)
T 3khe_A 112 VCMDK----QLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186 (191)
T ss_dssp HHSCH----HHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTTSSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHh----cccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHccCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 87621 22334567888999999999999999999886541 122347888888999999999999998888655
No 124
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.40 E-value=8e-13 Score=113.92 Aligned_cols=129 Identities=20% Similarity=0.312 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKM 235 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~ 235 (473)
.+....++++|..+|. ..++...+..++..++.. ++...+.. +|.+++|.|+|+||+.++... ...
T Consensus 7 ~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~--~~~~l~~~--~d~~~~g~i~~~ef~~~~~~~---~~~ 79 (147)
T 4ds7_A 7 EEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEA--EVADLMNE--IDVDGNHAIEFSEFLALMSRQ---LKC 79 (147)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHH--HHHHHHHH--HCTTSSSEEEHHHHHHHHHHH---HHT
T ss_pred HHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHH--HHHHHHHH--hccCCCCcCcHHHHHHHHHHh---ccC
Confidence 4455679999999988 678888888888877766 55555543 788999999999999988621 122
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
......+..+|+.+|.+++|+|+.+||+.+.. .+ ....++.++..+| |++|.|+|+||+.++.
T Consensus 80 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 80 NDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred CCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 34557889999999999999999999999643 32 2335788999999 9999999999998764
No 125
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=99.40 E-value=1.2e-12 Score=114.50 Aligned_cols=132 Identities=16% Similarity=0.249 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHhhhh---------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccc
Q psy4132 163 KETSSNINNAFKDLNQ---------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHK 233 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~---------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~ 233 (473)
++....++++|..+|. ..++...|+.+|..++.. ++..+ ..+|.+++|.|+|+||+.++......
T Consensus 5 ~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~--~~~~l---~~~D~~~~g~i~~~eF~~~~~~~~~~- 78 (156)
T 1wdc_C 5 QDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNE--DVFAV---GGTHKMGEKSLPFEEFLPAYEGLMDC- 78 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHH--HHHHT---TCCSSTTSCEECHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHH--HHHHH---HhhCCCCCCeeeHHHHHHHHHHHhhc-
Confidence 3445679999998885 578889999999888876 55555 35899999999999999988732211
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHH--hcCCCCCcccHHHHHHHHhhc
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDI--FDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~--~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.......+..+|+.+|.+++|+|+.+||+.+. ..+ ....++.++.. +|.|++|.|+|+||+.++...
T Consensus 79 -~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_C 79 -EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 151 (156)
T ss_dssp -CCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred -cCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence 13456789999999999999999999999964 333 23358899999 999999999999999998764
No 126
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=99.40 E-value=1.8e-13 Score=118.59 Aligned_cols=128 Identities=18% Similarity=0.306 Sum_probs=99.7
Q ss_pred HHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccc-cCCCCCceeHHHHHHHHcccccc--ccchH
Q psy4132 168 NINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDS-NKDRDGKINFQEFCSIVGNTDIH--KKMVV 237 (473)
Q Consensus 168 ~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~-D~d~dG~I~f~EF~~~~~~~~~~--~~~~~ 237 (473)
.++++|..+|. ..++...|+.+|..++.. ++..++. .+ |.+++|.|+|+||+.++...... .....
T Consensus 5 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~--~~~~l~~--~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 80 (148)
T 1m45_A 5 ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQ--LVQDIIN--ADSSLRDASSLTLDQITGLIEVNEKELDATTKA 80 (148)
T ss_dssp CCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHH--HHHHHHH--C--CC--CCEEEHHHHHHHHHHTHHHHHGGGCC
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHH--HHHHHHH--HhhCCCCCCeEcHHHHHHHHHHHHhhccccccc
Confidence 47789999998 788999999999988876 5665554 37 99999999999999988732000 02223
Q ss_pred HHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
....+..+|+.+|.+++|+|+.+||+.+. ..+ ....++.++..+|.|++|.|+|+||+.++.
T Consensus 81 ~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 81 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp CTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 45789999999999999999999999964 333 233588999999999999999999999875
No 127
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=99.40 E-value=7.1e-13 Score=122.09 Aligned_cols=134 Identities=10% Similarity=0.145 Sum_probs=102.0
Q ss_pred HHHHHHHHHHhhhh-------hhhHHHHHHHHhh--hhhhhhhhhhccc-------ccccccCCCCCceeHHHHHHHHcc
Q psy4132 165 TSSNINNAFKDLNQ-------LMSMAKEMVEISK--NISNKIINRQGEI-------TEDDSNKDRDGKINFQEFCSIVGN 228 (473)
Q Consensus 165 ~~~~l~eaF~~lD~-------~~e~~~~l~~lg~--~~~~~~~~~~~~~-------~~~~~D~d~dG~I~f~EF~~~~~~ 228 (473)
....++++|..+|+ ..++...|..++. .++.. ++..++ . .+|.|++|.|+|+||+.++..
T Consensus 34 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~--~~~~l~~~~~~lf~--~~D~d~dg~i~~~EF~~~~~~ 109 (208)
T 2hpk_A 34 MLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDE--QVEKMRDAVRVFFL--HKGVEPVNGLLREDWVEANRV 109 (208)
T ss_dssp --CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHH--HHHHHHHHHHHHHH--HTTCBTTTBEEGGGHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHH--HHHHHHHHHHHHHH--HhCCCCCCeEcHHHHHHHHHH
Confidence 34579999999998 6788888888887 67655 444444 3 489999999999999998751
Q ss_pred -----c--cccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc-CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 229 -----T--DIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ-QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 229 -----~--~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~-~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
. ..........+.+..+|+.+|.|++|+|+.+||+.+. ..+ ....++.++..+|.|++|.|+|+||+.++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~ 189 (208)
T 2hpk_A 110 FAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELVHLFR 189 (208)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTSCTTHHHHHHHHHCTTCCSSBCHHHHHHHHH
T ss_pred HhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 0 1111112233338999999999999999999999953 232 344689999999999999999999999987
Q ss_pred hcc
Q psy4132 300 QFS 302 (473)
Q Consensus 300 ~~~ 302 (473)
...
T Consensus 190 ~~~ 192 (208)
T 2hpk_A 190 KFW 192 (208)
T ss_dssp HHH
T ss_pred HHh
Confidence 663
No 128
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.39 E-value=1.1e-12 Score=118.84 Aligned_cols=136 Identities=10% Similarity=0.087 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHhh-hh-------hhhHHHHHHHH----hhhhhhhhhhhhcccc---------cccccCCCCCceeHHHH
Q psy4132 164 ETSSNINNAFKDL-NQ-------LMSMAKEMVEI----SKNISNKIINRQGEIT---------EDDSNKDRDGKINFQEF 222 (473)
Q Consensus 164 ~~~~~l~eaF~~l-D~-------~~e~~~~l~~l----g~~~~~~~~~~~~~~~---------~~~~D~d~dG~I~f~EF 222 (473)
.....++++|..+ |+ ..++...+..+ |..++.. +....+. ...+|.|++|.|+++||
T Consensus 9 ~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~--~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef 86 (191)
T 2ccm_A 9 FQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGK--KHNEARATLKLIWDGLRKYADENEDEQVTKEEW 86 (191)
T ss_dssp HHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSH--HHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred HHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCH--HHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHH
Confidence 3455799999999 88 67777778777 6665544 3333330 02479999999999999
Q ss_pred HHHHcccc-----ccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC-CHHHHHHHHHhcCCCCCcccHHHHH
Q psy4132 223 CSIVGNTD-----IHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ-NPLVQRVIDIFDEDRNGEVDFKEFI 295 (473)
Q Consensus 223 ~~~~~~~~-----~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~-~~~~~~l~~~~D~d~dG~I~~~EF~ 295 (473)
+.++.... ...........+..+|+.+|.|++|+|+.+||..+. ..+. ...++.+|..+|.|++|.|+|+||+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~Ef~ 166 (191)
T 2ccm_A 87 LKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFA 166 (191)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHHHHHHHHTTTTTSCCBHHHHH
T ss_pred HHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCcCHHHHH
Confidence 99887321 011123445679999999999999999999999964 3332 3358899999999999999999999
Q ss_pred HHHhhc
Q psy4132 296 QGVSQF 301 (473)
Q Consensus 296 ~~l~~~ 301 (473)
.++..+
T Consensus 167 ~~~~~~ 172 (191)
T 2ccm_A 167 RLWTEY 172 (191)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988765
No 129
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=99.39 E-value=5.3e-13 Score=114.83 Aligned_cols=126 Identities=19% Similarity=0.302 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccch
Q psy4132 164 ETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMV 236 (473)
Q Consensus 164 ~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~ 236 (473)
++...++++|..+|+ ..++...|+.+|..++.. ++..++.. ++|.|+|+||+.++.... ...
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~--~~~~~~~~------~~g~i~~~eF~~~~~~~~---~~~ 72 (143)
T 3j04_B 4 SQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDE--YLEGMMSE------APGPINFTMFLTMFGEKL---NGT 72 (143)
T ss_dssp HHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHH--HHHTTTTT------SSSCCCHHHHHHHHHHTT---TSS
T ss_pred HHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHH--HHHHHHHh------CCCCcCHHHHHHHHHHHh---ccC
Confidence 455679999999998 788889999999888876 55555432 789999999999887321 123
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
.....+..+|+.+|.|++|+|+.+||+.+. ..+ ....++.++..+|.|++|.|+|+||+.++..
T Consensus 73 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 73 DPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH 140 (143)
T ss_dssp CCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred CcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 346789999999999999999999999964 333 2345899999999999999999999998864
No 130
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=99.38 E-value=3.8e-13 Score=117.87 Aligned_cols=134 Identities=21% Similarity=0.283 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHhhh-h-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccc-
Q psy4132 163 KETSSNINNAFKDLN-Q-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHK- 233 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD-~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~- 233 (473)
++....++++|..+| . ..++...|+.++..++.. ++...+. .+|.+++|.|+|+||+.++.......
T Consensus 9 ~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~--~~~~l~~--~~D~~~~g~i~~~eF~~~~~~~~~~~~ 84 (158)
T 2jnf_A 9 SNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKS--TIRQLID--EFDPFGNGDIDFDSFKIIGARFLGEEV 84 (158)
T ss_dssp HHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHH--HHHHHHH--HHCTTCCSEECHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHH--HHHHHHH--HhCCCCCCcCcHHHHHHHHHHHhcccc
Confidence 344567999999999 6 788888899999888766 5555554 37999999999999999886322110
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
........+..+|+.+|.+++|+|+.+||+.+. ..+ ....+..++..+|.|++|.|+|+||+.++..
T Consensus 85 ~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 155 (158)
T 2jnf_A 85 NPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155 (158)
T ss_dssp CTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSS
T ss_pred chhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 001345679999999999999999999999964 333 2345889999999999999999999988753
No 131
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=99.38 E-value=2.2e-13 Score=122.89 Aligned_cols=137 Identities=13% Similarity=0.139 Sum_probs=100.0
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-c------cCCH---HHHHH---------HHHhcCCCCCcccHHHHH
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-L------QQNP---LVQRV---------IDIFDEDRNGEVDFKEFI 295 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~------~~~~---~~~~l---------~~~~D~d~dG~I~~~EF~ 295 (473)
...+...++.+|+.+|.|++|+|+.+||..+.. + +..+ .+..+ |..+|.|++|.|+|+|
T Consensus 9 ~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E-- 86 (186)
T 2hps_A 9 RAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNAT-- 86 (186)
T ss_dssp HHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHHH--
T ss_pred cHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHHH--
Confidence 345678899999999999999999999998642 2 2222 35555 4889999999999999
Q ss_pred HHHhhcccCCCcHHHHHHHh--HHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHH
Q psy4132 296 QGVSQFSVKGDRESKLKFAF--RIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLL 373 (473)
Q Consensus 296 ~~l~~~~~~~~~~e~l~~~F--~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~ 373 (473)
.++..........+.+..+| +.||.|++|.++.. ++..++. .. | ..++++++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~---E~~~~l~--------------------~~-g-~~~~~~~~~ 141 (186)
T 2hps_A 87 DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLP---EFKAFLQ--------------------AV-G-PDLTDDKAI 141 (186)
T ss_dssp HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHH---HHHHHHH--------------------HH-C-TTCCHHHHH
T ss_pred HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHH---HHHHHHH--------------------Hh-C-CCCCHHHHH
Confidence 55544422222234566666 88899998655553 3333332 22 2 248899999
Q ss_pred HHHHHhccCCCCCeeHHhhhcccee
Q psy4132 374 NSCLALDKLPDSPIYLKTYSSGVKV 398 (473)
Q Consensus 374 ~~~~~~D~~~dg~Is~~EF~~~~~v 398 (473)
.+|+.+|.|+||.|+++||...+.-
T Consensus 142 ~~~~~~D~d~dG~i~~~ef~~~~~~ 166 (186)
T 2hps_A 142 TCFNTLDFNKNGQISRDEFLVTVND 166 (186)
T ss_dssp HHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999999987763
No 132
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.37 E-value=1.4e-12 Score=124.46 Aligned_cols=145 Identities=19% Similarity=0.326 Sum_probs=104.5
Q ss_pred HHHHHHHHHhhCCC-CCCCccHHHHhcchh-cc----CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHH
Q psy4132 239 IRRLGKRFRKLDLD-NSGALSIDEFMSLPE-LQ----QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLK 312 (473)
Q Consensus 239 ~~~l~~~F~~~D~d-~~G~Is~~el~~l~~-~~----~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~ 312 (473)
.+++..+|+.||.+ ++|.|+.+||..++. ++ ....+..+|..+|.|++|.|+|+||+.++.... .....+.++
T Consensus 90 ~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~-~~~~~~~l~ 168 (256)
T 2jul_A 90 KKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILL-RGTVHEKLK 168 (256)
T ss_dssp HHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHH-SCCHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHh-ccChHHHHH
Confidence 34455566666654 799999999999643 22 123588999999999999999999999998763 456788999
Q ss_pred HHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhh
Q psy4132 313 FAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTY 392 (473)
Q Consensus 313 ~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF 392 (473)
.+|+.||.|++|.+..+|+..++..+...+... ..+. -.+..+.+++..+|+.+|.|+||.|+++||
T Consensus 169 ~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~----~~~~---------~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef 235 (256)
T 2jul_A 169 WAFNLYDINKDGCITKEEMLAIMKSIYDMMGRH----TYPI---------LREDAPLEHVERFFQKMDRNQDGVVTIDEF 235 (256)
T ss_dssp HHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCC----CSCC---------SCCCCHHHHHHHHHHHSCCSTTCSBCHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCC----CCcc---------cchhhHHHHHHHHHHHHCCCCCCcEeHHHH
Confidence 999999999997777644444333332111100 0000 002356788999999999999999999999
Q ss_pred hccce
Q psy4132 393 SSGVK 397 (473)
Q Consensus 393 ~~~~~ 397 (473)
...+.
T Consensus 236 ~~~~~ 240 (256)
T 2jul_A 236 LETCQ 240 (256)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88765
No 133
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.37 E-value=2.1e-12 Score=116.18 Aligned_cols=126 Identities=13% Similarity=0.262 Sum_probs=81.9
Q ss_pred HHHHHHHHhhhh-----hhhHHHHHHHHhhh-hhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHHH
Q psy4132 167 SNINNAFKDLNQ-----LMSMAKEMVEISKN-ISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIR 240 (473)
Q Consensus 167 ~~l~eaF~~lD~-----~~e~~~~l~~lg~~-~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~ 240 (473)
..+.++|+.+|. ..++...++.++.. ++.. ++...+. .+|.|++|.|+|+||..++.... ......
T Consensus 21 ~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~--~~~~~f~--~~D~d~~g~i~~~Ef~~~~~~~~----~~~~~~ 92 (183)
T 1s6c_A 21 QVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDAST--YAHYLFN--AFDTTQTGSVKFEDFVTALSILL----RGTVHE 92 (183)
T ss_dssp HHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHH--HHHHHHH--HHCTTCSSCEEHHHHHHHHHHHH----HCCHHH
T ss_pred HHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHH--HHHHHHH--HhCCCCCCcEeHHHHHHHHHHHc----CCCHHH
Confidence 345555555443 56666777777644 3333 3333333 36888888888888888776211 123456
Q ss_pred HHHHHHHhhCCCCCCCccHHHHhcchh-c----cC-----------CHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 241 RLGKRFRKLDLDNSGALSIDEFMSLPE-L----QQ-----------NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 241 ~l~~~F~~~D~d~~G~Is~~el~~l~~-~----~~-----------~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
.+..+|+.+|.|++|+|+.+||..+.. . +. ...+..+|+.+|.|++|.|+|+||+.++..
T Consensus 93 ~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~ 168 (183)
T 1s6c_A 93 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQE 168 (183)
T ss_dssp HHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTS
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 778888888888888888888887532 1 21 134677888888888888888888877754
No 134
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.37 E-value=5.5e-12 Score=118.37 Aligned_cols=140 Identities=14% Similarity=0.229 Sum_probs=101.2
Q ss_pred HHHHHHHHHhhhh-----hhhHHHHHHHHhh-hhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHH
Q psy4132 166 SSNINNAFKDLNQ-----LMSMAKEMVEISK-NISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDI 239 (473)
Q Consensus 166 ~~~l~eaF~~lD~-----~~e~~~~l~~lg~-~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~ 239 (473)
...+.+.|...|. ..++...+..+.. ..+.. .....+. .+|.|++|.|+|+||+.++.... .....
T Consensus 66 i~~l~~~F~~~d~~G~Is~~ef~~~l~~~~~~~~~~~--~~~~lf~--~~D~d~~G~I~~~Ef~~~l~~~~----~~~~~ 137 (229)
T 3dd4_A 66 LQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTT--YAHFLFN--AFDTDHNGAVSFEDFIKGLSILL----RGTVQ 137 (229)
T ss_dssp HHHHHHHHHTTCCSCCCCHHHHHHHHHHHSCSSSHHH--HHHHHHH--TTCSSCCSSCCHHHHHHHHHHHH----HSCHH
T ss_pred HHHHHHHHHhhCCCCCcCHHHHHHHHHHHCCCCCcHH--HHHHHHH--HcCCCCCCeEeHHHHHHHHHHHc----CCChH
Confidence 3445566655555 5666666666432 22222 2333333 48999999999999999887321 22345
Q ss_pred HHHHHHHHhhCCCCCCCccHHHHhcchhc----------------cCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhccc
Q psy4132 240 RRLGKRFRKLDLDNSGALSIDEFMSLPEL----------------QQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSV 303 (473)
Q Consensus 240 ~~l~~~F~~~D~d~~G~Is~~el~~l~~~----------------~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~ 303 (473)
+.++.+|+.+|.|++|+|+.+||..+... .....++.+|..+|.|++|.|+|+||+.++...
T Consensus 138 ~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~-- 215 (229)
T 3dd4_A 138 EKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKD-- 215 (229)
T ss_dssp HHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHTC--
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhC--
Confidence 78999999999999999999999985321 123458899999999999999999999999754
Q ss_pred CCCcHHHHHHHhHHhcC
Q psy4132 304 KGDRESKLKFAFRIYDI 320 (473)
Q Consensus 304 ~~~~~e~l~~~F~~~D~ 320 (473)
..+..+|+.||.
T Consensus 216 -----~~~~~~~~~~D~ 227 (229)
T 3dd4_A 216 -----ENIMRSMQLFEN 227 (229)
T ss_dssp -----HHHHHHHHHHTT
T ss_pred -----HHHHHHHHhccc
Confidence 678888888874
No 135
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=99.37 E-value=2.1e-12 Score=111.48 Aligned_cols=130 Identities=16% Similarity=0.293 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccc---cCCCCCceeHHHHHHHHcccccc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDS---NKDRDGKINFQEFCSIVGNTDIH 232 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~---D~d~dG~I~f~EF~~~~~~~~~~ 232 (473)
+++...++++|..+|+ ..++...|+.++..++.. ++..++.. + |.++ |.|+|+||+.++.... .
T Consensus 4 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~--~~~~l~~~--~~~~d~~~-g~i~~~eF~~~~~~~~-~ 77 (149)
T 2mys_C 4 KAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNA--EINKILGN--PSKEEMNA-AAITFEEFLPMLQAAA-N 77 (149)
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHH--HHHHHHHH--hhhccccC-CcCcHHHHHHHHHHHh-c
Confidence 3455679999999998 677888888999888766 55555443 5 8889 9999999999887321 0
Q ss_pred ccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 233 KKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 233 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
.........+..+|+.+|.+++|+|+.+||+.+. ..+ ....++.++.. |.|++|.|+|+||+.++.
T Consensus 78 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~ 147 (149)
T 2mys_C 78 NKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIM 147 (149)
T ss_pred cCCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHh
Confidence 1223456789999999999999999999999964 333 23458899999 999999999999999875
No 136
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.36 E-value=2.1e-12 Score=109.21 Aligned_cols=111 Identities=15% Similarity=0.239 Sum_probs=57.7
Q ss_pred ccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh----ccC---CHHHHHHHHHh
Q psy4132 209 SNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE----LQQ---NPLVQRVIDIF 281 (473)
Q Consensus 209 ~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~----~~~---~~~~~~l~~~~ 281 (473)
+|.|++|.|+++||..++... ........+..+|+.+|.+++|.|+.+||..+.. ... ...+..+|+.+
T Consensus 9 ~D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~ 84 (134)
T 1jfj_A 9 IDVNGDGAVSYEEVKAFVSKK----RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLM 84 (134)
T ss_dssp HCTTCSSEEEHHHHHHHHHTT----CCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHH
T ss_pred HCCCCCCcCCHHHHHHHHHHc----CCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHH
Confidence 455566666666666555421 1222344555566666666666666666655431 111 11245556666
Q ss_pred cCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhH
Q psy4132 282 DEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQ 328 (473)
Q Consensus 282 D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~ 328 (473)
|.+++|.|+++||..++.... ... +..+|+.+|.|++|.++.
T Consensus 85 D~d~~G~i~~~e~~~~l~~~~---~~~--~~~~~~~~D~~~dg~i~~ 126 (134)
T 1jfj_A 85 DVDGDGKLTKEEVTSFFKKHG---IEK--VAEQVMKADANGDGYITL 126 (134)
T ss_dssp CCSSSSEEEHHHHHHHHTTTT---CHH--HHHHHHHHHCSSSSEEEH
T ss_pred CCCCCCccCHHHHHHHHHHhC---HHH--HHHHHHHhCCCCCCcEeH
Confidence 666666666666666555331 111 555666666666655554
No 137
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=99.36 E-value=1.9e-12 Score=114.28 Aligned_cols=130 Identities=18% Similarity=0.363 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKM 235 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~ 235 (473)
.+....++++|..+|. ..++...+..++..++.. ++...+. .+|.+++|.|+|.||+.++... ..
T Consensus 23 ~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~--~~~~~~~--~~d~~~~g~i~~~ef~~~~~~~----~~ 94 (166)
T 2aao_A 23 EEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKES--EILDLMQ--AADVDNSGTIDYKEFIAATLHL----NK 94 (166)
T ss_dssp HHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHH--HHHHHHH--HHCTTCCSSBCHHHHHHHHTTC----HH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHH--HHHHHHH--HhCCCCCCeEcHHHHHHHHHHH----hh
Confidence 4455678888888886 566666677777666655 4444443 3688888888888888877521 11
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc-CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ-QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~-~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
......+..+|+.+|.+++|.|+.+||+.+.. .+ ....++.++..+|.|++|.|+|+||+.++..
T Consensus 95 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 161 (166)
T 2aao_A 95 IEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQK 161 (166)
T ss_dssp HHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC--------CCHHHHHCTTCSSSBCHHHHHHHHC-
T ss_pred cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 23446788888888888888888888888532 22 1234677888888888888888888887753
No 138
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=99.35 E-value=3.7e-13 Score=116.98 Aligned_cols=130 Identities=15% Similarity=0.291 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCC--CCCceeHHHHHHHHcccccccc
Q psy4132 164 ETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKD--RDGKINFQEFCSIVGNTDIHKK 234 (473)
Q Consensus 164 ~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d--~dG~I~f~EF~~~~~~~~~~~~ 234 (473)
+....++++|..+|+ ..++...|+.+|..++.. ++..++.. +|.+ ++|.|+|+||+.++..... ..
T Consensus 7 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~--~~~~l~~~--~d~~~~~~g~i~~~eF~~~~~~~~~-~~ 81 (151)
T 1w7j_B 7 DQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNA--EVLKVLGN--PKSDELKSRRVDFETFLPMLQAVAK-NR 81 (151)
T ss_dssp ----CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHH--HHHHHTTC--CCHHHHTTCEEEHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHH--HHHHHHHH--hCcCcCCCCcCcHHHHHHHHHHHhc-cC
Confidence 344569999999998 788899999999888876 56666553 7888 9999999999998873211 11
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
.......+..+|+.+|.+++|+|+.+||+.+. ..+ ....++.++..+| |++|.|+|+||+.++.
T Consensus 82 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 149 (151)
T 1w7j_B 82 GQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHIL 149 (151)
T ss_dssp ------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC
T ss_pred CCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHh
Confidence 22345678889999999999999999999964 333 2335889999999 9999999999998764
No 139
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.35 E-value=1.8e-12 Score=119.22 Aligned_cols=163 Identities=17% Similarity=0.125 Sum_probs=121.5
Q ss_pred hhCCCCCCCccHHHHhcchhc-c-CCHHHHHHHHHhcCC-CCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCc
Q psy4132 248 KLDLDNSGALSIDEFMSLPEL-Q-QNPLVQRVIDIFDED-RNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDD 324 (473)
Q Consensus 248 ~~D~d~~G~Is~~el~~l~~~-~-~~~~~~~l~~~~D~d-~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg 324 (473)
.++.+++|.|+.+++..+... + ....+..++..+|.+ ++|.|+++||..++..+.......+.+..+|+.+|.|++|
T Consensus 7 ~mg~~~~g~l~~~el~~~~~~~~~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G 86 (207)
T 2d8n_A 7 GMGNSKSGALSKEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDG 86 (207)
T ss_dssp -CTTCCTTCCCHHHHHHHHHHSSCCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCS
T ss_pred hhccccCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCC
Confidence 367899999999999997543 3 344688999999998 7999999999999988755556778899999999999996
Q ss_pred hhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccceee----e
Q psy4132 325 DYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVL----Q 400 (473)
Q Consensus 325 ~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl----~ 400 (473)
.+... |+..++. .... ..+.+++..+|+.+|.|++|.|+++||...+..+ .
T Consensus 87 ~i~~~---Ef~~~~~--------------------~~~~--~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g 141 (207)
T 2d8n_A 87 TLDFK---EYVIALH--------------------MTTA--GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMIT 141 (207)
T ss_dssp EEEHH---HHHHHHH--------------------HHSC--SSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSC
T ss_pred eEeHH---HHHHHHH--------------------HHcC--CCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhc
Confidence 66553 3333332 2111 2455678899999999999999999999887654 1
Q ss_pred -----eccc---CcHHHHHHHHHHHhh--CCCCCHHHHHHhhCCc
Q psy4132 401 -----LKSC---EDASFVEKTYEIVSQ--NVFVTVEQFSRLASVS 435 (473)
Q Consensus 401 -----~~~~---~~~~~~~~~~~~~~~--~~~ls~~e~a~~~~~s 435 (473)
..+. .....+..+++.++. +|.|+..||...+.-.
T Consensus 142 ~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 186 (207)
T 2d8n_A 142 PEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLAN 186 (207)
T ss_dssp HHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHHC
T ss_pred cccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHhC
Confidence 1111 123556777777654 5789999999887643
No 140
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=99.35 E-value=2.4e-12 Score=113.78 Aligned_cols=130 Identities=20% Similarity=0.283 Sum_probs=102.3
Q ss_pred HhHHHHHHHHHHHHhhhh-------hhhHHHHHHHHhh-hhhhhhhhhhcccccccccCCCCCceeHHHHHHHHcccccc
Q psy4132 161 KQKETSSNINNAFKDLNQ-------LMSMAKEMVEISK-NISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIH 232 (473)
Q Consensus 161 ~~~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~-~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~ 232 (473)
...+....++++|..+|. ..++...|+.+|. .++.. ++..++.. .+|.|+|+||+.++....
T Consensus 19 l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~--~~~~l~~~------~dg~i~~~eF~~~~~~~~-- 88 (166)
T 2mys_B 19 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNE--ELDAMIKE------ASGPINFTVFLTMFGEKL-- 88 (166)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHH--HHHHHHHH------CCCCcCHHHHHHHHHHHh--
Confidence 344556789999999998 6888888999998 88766 55544432 379999999999887321
Q ss_pred ccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 233 KKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 233 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
........+..+|+.+|.|++|+|+.+||..++. .+ ....++.++..+|.|++|.|+|+||+.++...
T Consensus 89 -~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 89 -KGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 160 (166)
T ss_pred -ccCCcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence 1223557899999999999999999999999643 32 23458899999999999999999999998654
No 141
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.35 E-value=2.1e-12 Score=111.14 Aligned_cols=123 Identities=15% Similarity=0.286 Sum_probs=100.5
Q ss_pred HHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHHHH
Q psy4132 169 INNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRR 241 (473)
Q Consensus 169 l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~ 241 (473)
++++|..+|+ ..++...|+.++..++.. ++..++.. +++|.|+|+||+.++.... .........
T Consensus 7 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~--~~~~~~~~-----~~~g~i~~~eF~~~~~~~~--~~~~~~~~~ 77 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNA--ELNTIKGQ-----LNAKEFDLATFKTVYRKPI--KTPTEQSKE 77 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHH--HHHHHHHH-----HTSSEECHHHHHHHHTSCC--CCGGGGHHH
T ss_pred HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHH--HHHHHHHh-----cCCCeEcHHHHHHHHHHHh--hcCcccHHH
Confidence 9999999998 788999999999888766 55555442 7899999999999987321 033456778
Q ss_pred HHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 242 LGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 242 l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
+..+|+.+|.|++|+|+.+||+.+. ..+ ....++.++..+|.|++|.|+|+||+.++..
T Consensus 78 l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 78 MLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp HHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence 9999999999999999999999964 333 2345889999999999999999999998864
No 142
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=99.34 E-value=4.6e-12 Score=114.01 Aligned_cols=127 Identities=17% Similarity=0.219 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKM 235 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~ 235 (473)
++....++++|..+|. ..++...|+.+|..+ . ++..++. .+|.|++|.|+|+||+.++....
T Consensus 35 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~--~--~~~~~~~--~~D~d~~g~i~~~Ef~~~~~~~~----- 103 (180)
T 3mse_B 35 NNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIKK--W--DINRILQ--ALDINDRGNITYTEFMAGCYRWK----- 103 (180)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCH--H--HHHHHHH--HHCTTCCSEECHHHHHHHHSCCT-----
T ss_pred HHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCH--H--HHHHHHH--HhCCCCCCcCcHHHHHHHHHhcc-----
Confidence 4556789999999988 778888888887653 2 3344443 37889999999999998887321
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-c-cCCHHHHHHHHHhcCCCC--------CcccHHHHHHHHhh
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-L-QQNPLVQRVIDIFDEDRN--------GEVDFKEFIQGVSQ 300 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~-~~~~~~~~l~~~~D~d~d--------G~I~~~EF~~~l~~ 300 (473)
....+.+..+|+.+|.|++|+|+.+||+.+.. . .....++.++..+|.|++ |.|+|+||+.+|..
T Consensus 104 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~ 178 (180)
T 3mse_B 104 NIESTFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS 178 (180)
T ss_dssp TC--CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence 11236788999999999999999999998644 1 123457889999999888 89999999988753
No 143
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=99.33 E-value=1.1e-11 Score=110.20 Aligned_cols=132 Identities=16% Similarity=0.184 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHhhhh-------hhhHHHHHHHHh----hhhhhhhhh-hh--------cccccccccCCCCCceeHHHHH
Q psy4132 164 ETSSNINNAFKDLNQ-------LMSMAKEMVEIS----KNISNKIIN-RQ--------GEITEDDSNKDRDGKINFQEFC 223 (473)
Q Consensus 164 ~~~~~l~eaF~~lD~-------~~e~~~~l~~lg----~~~~~~~~~-~~--------~~~~~~~~D~d~dG~I~f~EF~ 223 (473)
+....++++|..+|+ ..++...|+.++ ..++.. + +. .++. .+| ++|.|+|+||+
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~--~~~~~~~~~~~~~l~~--~~D--~~g~i~~~EF~ 76 (174)
T 1q80_A 3 LWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHA--KVLMDSLTGVWDNFLT--AVA--GGKGIDETTFI 76 (174)
T ss_dssp HHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHH--HHHHHHHHHHHHHTGG--GTT--TTSCEEHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcH--HHHHHHHHHHHHHHHH--hcC--CCCeEcHHHHH
Confidence 345679999999998 688888888888 666654 2 21 2333 366 89999999999
Q ss_pred HHHccccccc-cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc-CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 224 SIVGNTDIHK-KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ-QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 224 ~~~~~~~~~~-~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~-~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
.++....... ........+..+|+.+|.|++|+|+.+||+.+. ..+ ....++.++..+|.|++|.|+|+||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 156 (174)
T 1q80_A 77 NSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSD 156 (174)
T ss_dssp HHHHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTCCGGGHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCceEeHHHHHHHHHH
Confidence 9887422110 012345789999999999999999999999963 223 2345899999999999999999999998865
Q ss_pred c
Q psy4132 301 F 301 (473)
Q Consensus 301 ~ 301 (473)
.
T Consensus 157 ~ 157 (174)
T 1q80_A 157 F 157 (174)
T ss_dssp H
T ss_pred H
Confidence 4
No 144
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.33 E-value=3e-12 Score=113.96 Aligned_cols=135 Identities=17% Similarity=0.221 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHhhhh-------hhhHHH----HHHHHhhhhhhhhhhhh-----------cccccccccCCCCCceeHHH
Q psy4132 164 ETSSNINNAFKDLNQ-------LMSMAK----EMVEISKNISNKIINRQ-----------GEITEDDSNKDRDGKINFQE 221 (473)
Q Consensus 164 ~~~~~l~eaF~~lD~-------~~e~~~----~l~~lg~~~~~~~~~~~-----------~~~~~~~~D~d~dG~I~f~E 221 (473)
+....++++|..+|. ..++.. .++.+|..++.. ++. ..+. .+|.|++|.|+|+|
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~--~~~~l~~~~~~~~~~lf~--~~D~d~dg~i~~~E 79 (176)
T 1nya_A 4 IASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAA--EVQTLKNAFGGLFDYLAK--EAGVGSDGSLTEEQ 79 (176)
T ss_dssp HHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSH--HHHHHHHHHHHHHHHHHH--HHTSCTTCCBCHHH
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcH--HHHHHHHHHHHHHHHHHH--HhCCCCCCeEcHHH
Confidence 345679999999998 566666 677888887765 333 2332 47999999999999
Q ss_pred HHHHHccccccccc----hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc-CCHHHHHHHHHhcCCCCCcccHHHHH
Q psy4132 222 FCSIVGNTDIHKKM----VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ-QNPLVQRVIDIFDEDRNGEVDFKEFI 295 (473)
Q Consensus 222 F~~~~~~~~~~~~~----~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~-~~~~~~~l~~~~D~d~dG~I~~~EF~ 295 (473)
|+.++......... ......++.+|+.+|.|++|+|+.+||+.+. ..+ ....+..+|..+|.|++|.|+|+||+
T Consensus 80 f~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~ 159 (176)
T 1nya_A 80 FIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELL 159 (176)
T ss_dssp HHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEEEHHHHH
T ss_pred HHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence 99988742211111 1124678999999999999999999999853 333 23458899999999999999999999
Q ss_pred HHHhhcc
Q psy4132 296 QGVSQFS 302 (473)
Q Consensus 296 ~~l~~~~ 302 (473)
.++....
T Consensus 160 ~~~~~~~ 166 (176)
T 1nya_A 160 TAVRDFH 166 (176)
T ss_dssp HHHSCCS
T ss_pred HHHHHHh
Confidence 9997663
No 145
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.33 E-value=7.7e-12 Score=112.08 Aligned_cols=136 Identities=13% Similarity=0.205 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHhh-hh-------hhhHHHHHHHHh----hhhhhhhhhhhcc---------cccccccCCCCCceeHHHH
Q psy4132 164 ETSSNINNAFKDL-NQ-------LMSMAKEMVEIS----KNISNKIINRQGE---------ITEDDSNKDRDGKINFQEF 222 (473)
Q Consensus 164 ~~~~~l~eaF~~l-D~-------~~e~~~~l~~lg----~~~~~~~~~~~~~---------~~~~~~D~d~dG~I~f~EF 222 (473)
+....++.+|..+ |+ ..++...+..++ ..++.. +.... .....+|.|++|.|+++||
T Consensus 5 ~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef 82 (185)
T 2sas_A 5 FQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDA--DYKSMQASLEDEWRDLKGRADINKDDVVSWEEY 82 (185)
T ss_dssp HHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHH--HHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred HHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHH--HHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHH
Confidence 4456799999999 88 678888888888 566544 22221 0123479999999999999
Q ss_pred HHHHccccc-----cccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc-CCHHHHHHHHHhcCCCCCcccHHHHH
Q psy4132 223 CSIVGNTDI-----HKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ-QNPLVQRVIDIFDEDRNGEVDFKEFI 295 (473)
Q Consensus 223 ~~~~~~~~~-----~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~-~~~~~~~l~~~~D~d~dG~I~~~EF~ 295 (473)
+.++..... ..........+..+|+.+|.|++|+|+.+||..+.. .+ ....+..+|..+|.|++|.|+|+||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~ef~ 162 (185)
T 2sas_A 83 LAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYK 162 (185)
T ss_dssp HHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHHHH
T ss_pred HHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHHHHhcCCCCCcCcHHHHH
Confidence 998863211 111123457899999999999999999999998542 22 24458899999999999999999999
Q ss_pred HHHhhc
Q psy4132 296 QGVSQF 301 (473)
Q Consensus 296 ~~l~~~ 301 (473)
.++...
T Consensus 163 ~~~~~~ 168 (185)
T 2sas_A 163 ELYYRL 168 (185)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988765
No 146
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.33 E-value=1.7e-11 Score=111.88 Aligned_cols=125 Identities=16% Similarity=0.294 Sum_probs=96.0
Q ss_pred ccCC-CCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-ccC---CHHHHHHHHHhcC
Q psy4132 209 SNKD-RDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQ---NPLVQRVIDIFDE 283 (473)
Q Consensus 209 ~D~d-~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~~---~~~~~~l~~~~D~ 283 (473)
+|.+ ++|.|+++||..++... .........+..+|+.+|.|++|.|+..||..++. .+. ...+..+|..+|.
T Consensus 23 fd~~~~~G~i~~~e~~~~l~~~---~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~ 99 (198)
T 2r2i_A 23 FMTECPSGQLTLYEFKQFFGLK---NLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDV 99 (198)
T ss_dssp HHHHCTTSEECHHHHHHHHTCC---SCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCT
T ss_pred HHHhCCCCcCCHHHHHHHHHHh---CCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcC
Confidence 4545 79999999999998732 12233456799999999999999999999998543 222 2247889999999
Q ss_pred CCCCcccHHHHHHHHhhcc------cCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHh
Q psy4132 284 DRNGEVDFKEFIQGVSQFS------VKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALI 339 (473)
Q Consensus 284 d~dG~I~~~EF~~~l~~~~------~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~ 339 (473)
|++|.|+++||..++.... .....++.+..+|+.+|.|++|.++. +|+..++.
T Consensus 100 d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~---~Ef~~~~~ 158 (198)
T 2r2i_A 100 DGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSL---EEFMEGVQ 158 (198)
T ss_dssp TCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECH---HHHHHHHT
T ss_pred CCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcH---HHHHHHHH
Confidence 9999999999999998764 22344566999999999999977776 45555443
No 147
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.32 E-value=5.3e-12 Score=132.44 Aligned_cols=131 Identities=20% Similarity=0.393 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhh--------hhhhhhhhhhcccccccccCCCCCceeHHHHHHHHc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISK--------NISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVG 227 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~--------~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~ 227 (473)
++...+++++|+.+|+ ..|+...|+.++. .++.. ++..++. .+|.|++|.|+|+||+.++.
T Consensus 351 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~--~~D~d~dG~I~~~EF~~~~~ 426 (504)
T 3q5i_A 351 LEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEE--EVDNILK--EVDFDKNGYIEYSEFISVCM 426 (504)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHH--HHHHHHH--HHCTTCSSSEEHHHHHHHHS
T ss_pred HHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHH--HHHHHHH--HhCCCCCCcEeHHHHHHHHH
Confidence 4556778889998888 6677777777743 33333 4444444 37888889999999988876
Q ss_pred cccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchhc-c-CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 228 NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPEL-Q-QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 228 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~-~-~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.. ......+.+..+|+.+|.|++|+|+.+||+.++.. + ....++.+|..+|.|+||.|+|+||+.+|...
T Consensus 427 ~~----~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 498 (504)
T 3q5i_A 427 DK----QILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKI 498 (504)
T ss_dssp CH----HHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCSCCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHH
T ss_pred hh----hcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 32 22334567888899999999999999998886432 2 23457888888999999999999998888765
No 148
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.32 E-value=3.8e-12 Score=142.16 Aligned_cols=149 Identities=15% Similarity=0.296 Sum_probs=115.6
Q ss_pred ceeHHHHHHHHccccc-----------cccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHH
Q psy4132 216 KINFQEFCSIVGNTDI-----------HKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDI 280 (473)
Q Consensus 216 ~I~f~EF~~~~~~~~~-----------~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~ 280 (473)
.++|++|...+..... ..........++.+|+.||.|++|+|+.+||..++ .++ ....++.++..
T Consensus 690 ~i~~~eF~~~~~~~~~~~e~~~l~~~~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~ 769 (863)
T 1sjj_A 690 RVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSI 769 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhhccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 5789999877663211 11224467889999999999999999999999853 333 34568999999
Q ss_pred hcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHh
Q psy4132 281 FDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINR 360 (473)
Q Consensus 281 ~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~ 360 (473)
+|.|++|.|+|+||+.++..........+.+..+|+.| .|++|.++. .++..+
T Consensus 770 ~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~l~~aF~~~-~d~~G~Is~---~El~~~----------------------- 822 (863)
T 1sjj_A 770 VDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKIL-AGDKNYITV---DELRRE----------------------- 822 (863)
T ss_dssp HCTTSCSEEETTHHHHTHHHHSTTCSSSHHHHHHHHGG-GTSSSEEEH---HHHHHH-----------------------
T ss_pred hCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHH-hCCCCcCcH---HHHHHH-----------------------
Confidence 99999999999999999987766666778899999999 788844444 233322
Q ss_pred hhCCCCCCHHHHHHHHHHhccC-----CCCCeeHHhhhccce
Q psy4132 361 ARGLELLSPEDLLNSCLALDKL-----PDSPIYLKTYSSGVK 397 (473)
Q Consensus 361 ~~g~~~ls~~ei~~~~~~~D~~-----~dg~Is~~EF~~~~~ 397 (473)
++++++..++..+|.+ +||.|+|+||...+.
T Consensus 823 ------l~~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~ 858 (863)
T 1sjj_A 823 ------LPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALY 858 (863)
T ss_dssp ------SCHHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHS
T ss_pred ------CCHHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHh
Confidence 2367788999999987 699999999987664
No 149
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.32 E-value=6.9e-12 Score=117.30 Aligned_cols=115 Identities=13% Similarity=0.248 Sum_probs=66.5
Q ss_pred hhhHHHHHHHHhhh-hhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCc
Q psy4132 179 LMSMAKEMVEISKN-ISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGAL 257 (473)
Q Consensus 179 ~~e~~~~l~~lg~~-~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I 257 (473)
..++...+..++.. ++.. ++...+. .+|.|++|.|+|+||+.++.... .....+.++.+|+.+|.|++|+|
T Consensus 71 ~~E~~~~l~~l~~~~~~~~--~~~~~f~--~~D~d~~G~I~~~Ef~~~l~~~~----~~~~~~~l~~~F~~~D~d~dG~I 142 (224)
T 1s1e_A 71 EETFKQIYAQFFPHGDAST--YAHYLFN--AFDTTQTGSVKFEDFVTALSILL----RGTVHEKLRWTFNLYDINKDGYI 142 (224)
T ss_dssp HHHHHHHHHTTCTTSCCHH--HHHHHHH--HHCTTCSSCBCHHHHHHHHHHHH----HCCHHHHHHHHHHHHCTTCCSEE
T ss_pred HHHHHHHHHHhcCCCCcHH--HHHHHHH--HhcCCCCCcEeHHHHHHHHHHHc----cCCHHHHHHHHHHHHcCCCCCeE
Confidence 34555555555432 2222 2233332 36777777777777777665211 11234566777777777777777
Q ss_pred cHHHHhcchh-c----cC-------C----HHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 258 SIDEFMSLPE-L----QQ-------N----PLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 258 s~~el~~l~~-~----~~-------~----~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
+.+||..+.. . +. . ..++.+|+.+|.|++|.|+|+||+.++...
T Consensus 143 s~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~ 202 (224)
T 1s1e_A 143 NKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED 202 (224)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence 7777776422 1 11 1 346677777777777777777777776543
No 150
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=99.31 E-value=2.2e-12 Score=120.78 Aligned_cols=131 Identities=19% Similarity=0.162 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHH-HHHHHhhhhhhhhhhhhcccccccc---------cCCCCCceeHHHHHHH
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAK-EMVEISKNISNKIINRQGEITEDDS---------NKDRDGKINFQEFCSI 225 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~-~l~~lg~~~~~~~~~~~~~~~~~~~---------D~d~dG~I~f~EF~~~ 225 (473)
.+....++++|..+|. ..++.. .++.++..++.. ++..++.. + |.|++|.|+|+||+.+
T Consensus 47 ~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~--~~~~~~~~--~f~~~~~~~~D~d~~G~I~~~EF~~~ 122 (226)
T 2lvv_A 47 AESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTT--HLPDIVQR--AFDKAKDLGNKVKGVGEEDLVEFLEF 122 (226)
T ss_dssp HHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSS--SCHHHHHH--HHHHHHHHHHHHSCCCCCSCBCHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHH--HHHHHHHH--HHHHhcccCCCCCCCCcCCHHHHHHH
Confidence 4456789999999998 667776 456667766655 44444432 4 8999999999999995
Q ss_pred HccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-c---cC-CHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 226 VGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-L---QQ-NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 226 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~---~~-~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
+.. .........+..+|+.+|.|++|+|+.+||+.++. + +. ...++.+|..+|.|++|.|+|+||+.++..
T Consensus 123 ~~~----~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~EF~~~~~~ 198 (226)
T 2lvv_A 123 RLM----LCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEFSCWAVT 198 (226)
T ss_dssp HHH----HHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEEHHHHHHHHHH
T ss_pred HHH----HHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 431 11223456899999999999999999999999642 2 22 224889999999999999999999999865
Q ss_pred c
Q psy4132 301 F 301 (473)
Q Consensus 301 ~ 301 (473)
.
T Consensus 199 ~ 199 (226)
T 2lvv_A 199 K 199 (226)
T ss_dssp H
T ss_pred c
Confidence 4
No 151
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=99.31 E-value=3.5e-12 Score=104.99 Aligned_cols=101 Identities=18% Similarity=0.340 Sum_probs=82.6
Q ss_pred HHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch
Q psy4132 187 VEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP 266 (473)
Q Consensus 187 ~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~ 266 (473)
+++|.+++.. ++..++.. +| ++|.|+|+||+.++.. .......++.+|+.+|.|++|+|+.+||+.+.
T Consensus 1 ralG~~~t~~--e~~~~~~~--~d--~~g~i~~~ef~~~~~~------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l 68 (110)
T 1pva_A 1 XAAKDLLKAD--DIKKALDA--VK--AEGSFNHKKFFALVGL------KAMSANDVKKVFKAIDADASGFIEEEELKFVL 68 (110)
T ss_dssp -CHHHHSCHH--HHHHHHHH--TC--STTCCCHHHHHHHHTC------TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGG
T ss_pred CcccccCCHH--HHHHHHHh--cC--CCCcCcHHHHHHHHcc------CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4678888877 77777654 55 8899999999999862 23567889999999999999999999999964
Q ss_pred h-c---c---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 267 E-L---Q---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 267 ~-~---~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
. . + ....++.++..+|.|++|.|+|+||+.++.
T Consensus 69 ~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 69 KSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH 108 (110)
T ss_dssp GGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 3 3 2 223588999999999999999999998875
No 152
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.31 E-value=4.3e-12 Score=110.41 Aligned_cols=126 Identities=24% Similarity=0.386 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchH
Q psy4132 165 TSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVV 237 (473)
Q Consensus 165 ~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~ 237 (473)
....++++|..+|. ..++ ..+..++.++ .....+. .+|.+++|.|+|+||+.++.... ....
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~-----~~~~~~~--~~D~~~~g~i~~~ef~~~~~~~~---~~~~ 72 (155)
T 3ll8_B 4 EIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP-----LVQRVID--IFDTDGNGEVDFKEFIEGVSQFS---VKGD 72 (155)
T ss_dssp HHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT-----THHHHHH--HHCTTCSSSBCHHHHHHHHGGGC---SSCC
T ss_pred HHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch-----HHHHHHH--HHCCCCCCcCcHHHHHHHHHHHc---ccCC
Confidence 44578889998887 3333 3344444332 2222332 36888889999999988877321 1224
Q ss_pred HHHHHHHHHHhhCCCCCCCccHHHHhcchhc--c---CCHHHHHHHHH----hcCCCCCcccHHHHHHHHhhc
Q psy4132 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLPEL--Q---QNPLVQRVIDI----FDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~--~---~~~~~~~l~~~----~D~d~dG~I~~~EF~~~l~~~ 301 (473)
....+..+|+.+|.|++|+|+.+||+.+... + ....+..++.. +|.|++|.|+|+||+.++...
T Consensus 73 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 145 (155)
T 3ll8_B 73 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 145 (155)
T ss_dssp HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 5577888899999999999999998885322 2 22345666666 888999999999998888765
No 153
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=99.31 E-value=6.3e-12 Score=113.99 Aligned_cols=137 Identities=14% Similarity=0.132 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHH-----HHHHHHhhhhhhhhh---hhhcccccccccCCCCCceeHHHHHHHHc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMA-----KEMVEISKNISNKII---NRQGEITEDDSNKDRDGKINFQEFCSIVG 227 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~-----~~l~~lg~~~~~~~~---~~~~~~~~~~~D~d~dG~I~f~EF~~~~~ 227 (473)
++....++++|..+|+ ..++. ..++.+|..++.... ++...+. .+|.|++|.|+|+||+.++.
T Consensus 16 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~--~~D~d~~g~i~~~EF~~~~~ 93 (195)
T 1qv0_A 16 PRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFR--GCGMEYGKEIAFPQFLDGWK 93 (195)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHH--HTTCCTTCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHH--HcCCCCCceEcHHHHHHHHH
Confidence 4455679999999998 56666 577888887765410 1233333 47999999999999999876
Q ss_pred cccccc---cchHHHHHH----HHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHH
Q psy4132 228 NTDIHK---KMVVDIRRL----GKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQ 296 (473)
Q Consensus 228 ~~~~~~---~~~~~~~~l----~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~ 296 (473)
...... ......+.+ ..+|+.+|.|++|+|+.+||+.+. ..+. ...++.++..+|.|++|.|+|+||+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~ 173 (195)
T 1qv0_A 94 QLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTR 173 (195)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHH
T ss_pred HHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHH
Confidence 321100 000111223 389999999999999999999964 3332 34589999999999999999999998
Q ss_pred HHhhc
Q psy4132 297 GVSQF 301 (473)
Q Consensus 297 ~l~~~ 301 (473)
++..+
T Consensus 174 ~~~~~ 178 (195)
T 1qv0_A 174 QHLGF 178 (195)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88654
No 154
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=99.31 E-value=7.7e-12 Score=112.93 Aligned_cols=137 Identities=12% Similarity=0.148 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHH-----HHHHHHhhhhhhhhh---hhhcccccccccCCCCCceeHHHHHHHHc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMA-----KEMVEISKNISNKII---NRQGEITEDDSNKDRDGKINFQEFCSIVG 227 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~-----~~l~~lg~~~~~~~~---~~~~~~~~~~~D~d~dG~I~f~EF~~~~~ 227 (473)
++....++++|..+|+ ..++. ..|+.+|..++.... .+..++. .+|.|++|.|+|+||+.++.
T Consensus 12 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~--~~D~d~~g~i~~~EF~~~~~ 89 (191)
T 1uhk_A 12 PRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG--GAGMKYGVETDWPAYIEGWK 89 (191)
T ss_dssp HHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH--HTTCCTTCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHH--HhCcCCCCcCcHHHHHHHHH
Confidence 3455679999999998 56776 677888877765410 1233333 47999999999999999876
Q ss_pred cccccc---cchHHHHHH----HHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHH
Q psy4132 228 NTDIHK---KMVVDIRRL----GKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQ 296 (473)
Q Consensus 228 ~~~~~~---~~~~~~~~l----~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~ 296 (473)
...... ......+.+ ..+|+.+|.|++|+|+.+||+.+. ..+ ....++.++..+|.|++|.|+|+||+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~ 169 (191)
T 1uhk_A 90 KLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTR 169 (191)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHH
T ss_pred HHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 321100 000111223 389999999999999999999964 333 234588999999999999999999999
Q ss_pred HHhhc
Q psy4132 297 GVSQF 301 (473)
Q Consensus 297 ~l~~~ 301 (473)
++..+
T Consensus 170 ~~~~~ 174 (191)
T 1uhk_A 170 QHLGF 174 (191)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 155
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.31 E-value=6.3e-12 Score=131.50 Aligned_cols=132 Identities=22% Similarity=0.450 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHHHhhhh-------hhhHHHHHHHHhh--------hhhhhhhhhhcccccccccCCCCCceeHHHHHHHH
Q psy4132 162 QKETSSNINNAFKDLNQ-------LMSMAKEMVEISK--------NISNKIINRQGEITEDDSNKDRDGKINFQEFCSIV 226 (473)
Q Consensus 162 ~~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~--------~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~ 226 (473)
.++...+++++|+.+|. ..|+...|..++. .++.. ++..++. .+|.|++|.|+|+||+.++
T Consensus 341 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~--~~D~d~~G~I~~~EF~~~~ 416 (494)
T 3lij_A 341 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIES--EVDAILG--AADFDRNGYIDYSEFVTVA 416 (494)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHH--HHHHHHH--HHCTTCSSSEEHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHH--HHHHHHH--HhCCCCCCcCcHHHHHHHH
Confidence 35566788999998888 6677777777764 23333 4444444 3788899999999998887
Q ss_pred ccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchhc--cCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 227 GNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPEL--QQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 227 ~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~--~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
... ......+.+..+|+.||.|++|+|+.+||+.++.. .....++.+++.+|.|+||.|+|+||+.+|..+
T Consensus 417 ~~~----~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 489 (494)
T 3lij_A 417 MDR----KSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKL 489 (494)
T ss_dssp SCH----HHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-CCSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHH
T ss_pred Hhh----hccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhh
Confidence 632 22334567888999999999999999999886432 334568889999999999999999999888765
No 156
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=99.31 E-value=3.6e-12 Score=104.77 Aligned_cols=99 Identities=22% Similarity=0.336 Sum_probs=80.0
Q ss_pred HhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-
Q psy4132 189 ISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE- 267 (473)
Q Consensus 189 lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~- 267 (473)
++..++.. ++..++.. +| ++|.|+|+||+.++.. .....+.++.+|+.+|.|++|+|+.+||+.+..
T Consensus 3 l~~~~~~~--ei~~~~~~--~D--~~g~i~~~eF~~~~~~------~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~ 70 (109)
T 3fs7_A 3 ITDILSAK--DIESALSS--CQ--AADSFNYKSFFSTVGL------SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKN 70 (109)
T ss_dssp GGGTSCHH--HHHHHHHH--TC--STTCCCHHHHHHHHTC------TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGG
T ss_pred ccCcCCHH--HHHHHHHh--cC--CCCcCcHHHHHHHHhc------CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHH
Confidence 56666666 66666553 55 7999999999999873 234678899999999999999999999999643
Q ss_pred c---c---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 268 L---Q---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 268 ~---~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
. + ....++.++..+|.|++|.|+|+||+.++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 71 FSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp TCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred HhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 3 2 223588999999999999999999998874
No 157
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.31 E-value=1.9e-11 Score=110.45 Aligned_cols=161 Identities=19% Similarity=0.184 Sum_probs=119.6
Q ss_pred CCCCCccHHHHhcchhc--cCCHHHHHHHHHhcCC-CCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhH
Q psy4132 252 DNSGALSIDEFMSLPEL--QQNPLVQRVIDIFDED-RNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQ 328 (473)
Q Consensus 252 d~~G~Is~~el~~l~~~--~~~~~~~~l~~~~D~d-~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~ 328 (473)
+.+|.++.+++..+... .....+..+|..+|.+ ++|.|+++||..++..+.....+.+.+..+|+.+|.|++|.+..
T Consensus 3 ~~~~~l~~~el~~~~~~~~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~ 82 (190)
T 2l2e_A 3 KSQSKLSQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDF 82 (190)
T ss_dssp CSSCCSCHHHHHHHHHHHCSCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEH
T ss_pred cccccCCHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeH
Confidence 45788999998886432 2455689999999999 89999999999999887555567788999999999999965555
Q ss_pred hhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccceee---------
Q psy4132 329 ALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVL--------- 399 (473)
Q Consensus 329 ~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl--------- 399 (473)
.|+...+.. ... ..+.+++..+|+.+|.|++|.|+++||...+..+
T Consensus 83 ---~ef~~~~~~--------------------~~~--~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~ 137 (190)
T 2l2e_A 83 ---KEFICALSV--------------------TSR--GELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVK 137 (190)
T ss_dssp ---HHHHHHHTT--------------------SSC--SCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSC
T ss_pred ---HHHHHHHHH--------------------HcC--CCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccC
Confidence 344433332 111 3567889999999999999999999999877642
Q ss_pred -eecccCcHHHHHHHHHHHhh--CCCCCHHHHHHhhCCcHH
Q psy4132 400 -QLKSCEDASFVEKTYEIVSQ--NVFVTVEQFSRLASVSLV 437 (473)
Q Consensus 400 -~~~~~~~~~~~~~~~~~~~~--~~~ls~~e~a~~~~~s~~ 437 (473)
..........+..+++.++. +|.||..||.+.+.-...
T Consensus 138 ~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~ 178 (190)
T 2l2e_A 138 LPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPT 178 (190)
T ss_dssp CCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTCTH
T ss_pred cccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCcH
Confidence 11112235566777777654 578999999988755443
No 158
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.30 E-value=5.9e-12 Score=113.79 Aligned_cols=59 Identities=17% Similarity=0.317 Sum_probs=26.4
Q ss_pred HHHHHHhhCCCCCCCccHHHHhcchh-cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 242 LGKRFRKLDLDNSGALSIDEFMSLPE-LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 242 l~~~F~~~D~d~~G~Is~~el~~l~~-~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
+..+|+.+|.+++|.|+..||..+.. .+ ....+..+|+.+|.|++|.|+++||..++..
T Consensus 65 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~ 127 (190)
T 1g8i_A 65 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127 (190)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHH
Confidence 44455555555555555555544211 11 0112344455555555555555555544443
No 159
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=99.30 E-value=3.9e-12 Score=109.01 Aligned_cols=123 Identities=16% Similarity=0.263 Sum_probs=97.0
Q ss_pred HHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHH
Q psy4132 167 SNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDI 239 (473)
Q Consensus 167 ~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~ 239 (473)
..++++|..+|. ..++...|+.+|..++.. ++..++. +++|.|+|+||+.++..... .......
T Consensus 5 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~--~~~~~~~------~~~g~i~~~eF~~~~~~~~~-~~~~~~~ 75 (140)
T 1ggw_A 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLA--EITEIES------TLPAEVDMEQFLQVLNRPNG-FDMPGDP 75 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHH--HHHHHHT------TSCSSEEHHHHHHHHCTTSS-SSSSCCH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHH--HHHHHHh------CCCCcCcHHHHHHHHHHHhc-ccCcccH
Confidence 358899999998 788888999999888766 4544432 78999999999999874221 1222345
Q ss_pred HHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 240 RRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 240 ~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
..+..+|+.+|.|++|+|+.+||+.+. ..+ ....++.++..+|. ++|.|+|+||+.++.
T Consensus 76 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~ 138 (140)
T 1ggw_A 76 EEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL 138 (140)
T ss_dssp HHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence 789999999999999999999999953 333 23458899999999 999999999998874
No 160
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=99.30 E-value=6.8e-12 Score=109.71 Aligned_cols=128 Identities=13% Similarity=0.215 Sum_probs=101.4
Q ss_pred hHHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHcccccccc
Q psy4132 162 QKETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKK 234 (473)
Q Consensus 162 ~~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~ 234 (473)
..+....++++|..+|+ ..++...|+.+|..++.. ++..++. +++|.|+|+||+.++.... .
T Consensus 13 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~--~~~~~~~------~~~g~i~~~eF~~~~~~~~---~ 81 (156)
T 1wdc_B 13 PQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDK--ELTAMLK------EAPGPLNFTMFLSIFSDKL---S 81 (156)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHH--HHHHHHT------TSSSCCCHHHHHHHHHHHT---C
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHH--HHHHHHH------hCCCcCcHHHHHHHHHHHh---c
Confidence 34456679999999998 688889999999888766 5554443 4689999999999887321 1
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.......+..+|+.+|.+++|+|+.+||+.+. ..+ ....++.++..+|.| +|.|+|+||+.++...
T Consensus 82 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_B 82 GTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS 151 (156)
T ss_dssp SCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred CCChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcC
Confidence 12345789999999999999999999999964 333 233589999999999 9999999999998654
No 161
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=99.29 E-value=6.2e-12 Score=115.14 Aligned_cols=131 Identities=19% Similarity=0.330 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHcccccc---
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIH--- 232 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~--- 232 (473)
.+....++++|..+|. ..++... ..++..++ +..++. .+|.|++|.|+|+||+.++......
T Consensus 25 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~-----~~~l~~--~~D~d~dg~i~~~EF~~~~~~~~~~~~~ 96 (202)
T 2bec_A 25 QASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL-----GDRIIE--SFFPDGSQRVDFPGFVRVLAHFRPVEDE 96 (202)
T ss_dssp HHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT-----HHHHHH--TTSCSSCCCCCHHHHHHHHGGGSCCCHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc-----HHHHHH--HhCCCCCCcCcHHHHHHHHHHhcccchh
Confidence 4456679999999997 4555555 66766554 223333 4899999999999999998743210
Q ss_pred ----------ccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hc-c---CCHHHHHHHHH----hcCCCCCcccHHH
Q psy4132 233 ----------KKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-EL-Q---QNPLVQRVIDI----FDEDRNGEVDFKE 293 (473)
Q Consensus 233 ----------~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~-~---~~~~~~~l~~~----~D~d~dG~I~~~E 293 (473)
.........++.+|+.+|.|++|+|+.+||+.+. .. + ....++.++.. +|.|++|.|+|+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~E 176 (202)
T 2bec_A 97 DTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVE 176 (202)
T ss_dssp HHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHH
T ss_pred cccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHH
Confidence 0034567789999999999999999999999964 33 3 22346666766 9999999999999
Q ss_pred HHHHHhhc
Q psy4132 294 FIQGVSQF 301 (473)
Q Consensus 294 F~~~l~~~ 301 (473)
|+.++...
T Consensus 177 F~~~~~~~ 184 (202)
T 2bec_A 177 FTKSLEKM 184 (202)
T ss_dssp HHHTTTTS
T ss_pred HHHHHHHh
Confidence 99988643
No 162
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.29 E-value=3e-12 Score=139.55 Aligned_cols=91 Identities=19% Similarity=0.248 Sum_probs=75.4
Q ss_pred hHH-HHHHHHHHHhhCCCCCCCccHHHHhcchhc---------c---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcc
Q psy4132 236 VVD-IRRLGKRFRKLDLDNSGALSIDEFMSLPEL---------Q---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFS 302 (473)
Q Consensus 236 ~~~-~~~l~~~F~~~D~d~~G~Is~~el~~l~~~---------~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~ 302 (473)
..+ .++++.+|+.+| +++|.|+.+||+.++.. + ....++.++..+|.|++|.|+|+||+.++...
T Consensus 527 ~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~- 604 (714)
T 3bow_A 527 EEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI- 604 (714)
T ss_dssp GGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHHH-
T ss_pred hhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH-
Confidence 444 788999999999 99999999999996432 1 12357899999999999999999999999875
Q ss_pred cCCCcHHHHHHHhHHhcCCCCchhhHhhHHHH
Q psy4132 303 VKGDRESKLKFAFRIYDIDNDDDYYQALGNEL 334 (473)
Q Consensus 303 ~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el 334 (473)
+.++.+|+.||.|++|.+...|+..+
T Consensus 605 ------~~l~~~F~~~D~d~dG~Is~~El~~~ 630 (714)
T 3bow_A 605 ------QKYQKIYREIDVDRSGTMNSYEMRKA 630 (714)
T ss_dssp ------HHHHHHHHHHCTTCCSSEEHHHHHHH
T ss_pred ------HHHHHHHHHhCCCCCCeECHHHHHHH
Confidence 78999999999999977777555433
No 163
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.29 E-value=9.6e-13 Score=119.64 Aligned_cols=126 Identities=17% Similarity=0.377 Sum_probs=83.4
Q ss_pred HHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHH
Q psy4132 167 SNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDI 239 (473)
Q Consensus 167 ~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~ 239 (473)
..++++|..+|. ..++...|..++..++.. ++..++. .+|.|++|.|+|+||+.++.... .....
T Consensus 10 ~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~--~~~~l~~--~~D~d~dG~I~~~EF~~~~~~~~----~~~~~ 81 (188)
T 1s6i_A 10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMES--EIKDLMD--AADIDKSGTIDYGEFIAATVHLN----KLERE 81 (188)
T ss_dssp CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHH--HHHHHHH--HTCTTCSSEECHHHHHHHHTTSS----SSCCC
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHH--HHHHHHH--HcCCCCCCeEeHHHHHHHHHHHh----ccCHH
Confidence 357778887776 566666777777666654 4444443 36777888888888877765211 11123
Q ss_pred HHHHHHHHhhCCCCCCCccHHHHhcch-hcc-CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 240 RRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ-QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 240 ~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~-~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
..+..+|+.+|.|++|+|+.+||+.++ ..+ ....++.++..+|.|++|.|+|+||+.++..
T Consensus 82 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 144 (188)
T 1s6i_A 82 ENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK 144 (188)
T ss_dssp CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 456777888888888888888887753 222 2335677888888888888888888777654
No 164
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=99.29 E-value=4.8e-12 Score=103.82 Aligned_cols=99 Identities=17% Similarity=0.295 Sum_probs=79.5
Q ss_pred HHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh
Q psy4132 188 EISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE 267 (473)
Q Consensus 188 ~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~ 267 (473)
+||. ++.. ++..++.. +| ++|.|+|+||+.++.. .......++.+|+.+|.|++|+|+.+||+.+..
T Consensus 2 slG~-~~~~--e~~~l~~~--~d--~~g~i~~~eF~~~~~~------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~ 68 (108)
T 2pvb_A 2 SFAG-LKDA--DVAAALAA--CS--AADSFKHKEFFAKVGL------ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQ 68 (108)
T ss_dssp CCTT-SCHH--HHHHHHHH--TC--STTCCCHHHHHHHHTG------GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGG
T ss_pred CcCC-CCHH--HHHHHHHH--hC--CCCcCcHHHHHHHHhC------ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 4666 6666 66666653 55 7899999999999862 234678899999999999999999999999643
Q ss_pred -c---c---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 268 -L---Q---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 268 -~---~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
. + ....++.++..+|.|++|.|+|+||+.++.
T Consensus 69 ~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 69 NFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp GTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 3 2 223588999999999999999999998774
No 165
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.29 E-value=4.3e-12 Score=116.45 Aligned_cols=127 Identities=16% Similarity=0.333 Sum_probs=64.3
Q ss_pred HHHHHHHHHHhhhh--------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccch
Q psy4132 165 TSSNINNAFKDLNQ--------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMV 236 (473)
Q Consensus 165 ~~~~l~eaF~~lD~--------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~ 236 (473)
+..+++++|..+|+ ..++...++.++..++.. .+...+. .+|.|++|.|+|+||+.++.... ..
T Consensus 20 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~--~~~~~f~--~~D~d~~G~i~~~Ef~~~~~~~~----~~ 91 (204)
T 1jba_A 20 DAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQ--YVEAMFR--AFDTNGDNTIDFLEYVAALNLVL----RG 91 (204)
T ss_dssp HHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHH--HHHHHHH--HHCCSSSSEECHHHHHHHHHHHS----SC
T ss_pred CHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHH--HHHHHHH--HHcCCCCCeEeHHHHHHHHHHHc----cC
Confidence 44567777776664 344444455444433322 2222222 25566666666666666554211 11
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcchh-c----c----------------CCHHHHHHHHHhcCCCCCcccHHHHH
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-L----Q----------------QNPLVQRVIDIFDEDRNGEVDFKEFI 295 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~----~----------------~~~~~~~l~~~~D~d~dG~I~~~EF~ 295 (473)
...+.+..+|+.+|.|++|+|+.+||..+.. . + ....+..+|..+|.|++|.|+|+||+
T Consensus 92 ~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~ 171 (204)
T 1jba_A 92 TLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFV 171 (204)
T ss_dssp CCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHH
T ss_pred CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence 2234455666666666666666666665321 1 0 01235556666666666666666666
Q ss_pred HHHh
Q psy4132 296 QGVS 299 (473)
Q Consensus 296 ~~l~ 299 (473)
.++.
T Consensus 172 ~~~~ 175 (204)
T 1jba_A 172 EGAR 175 (204)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5553
No 166
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.29 E-value=6.1e-12 Score=131.13 Aligned_cols=131 Identities=23% Similarity=0.426 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHhhhh-------hhhH----HHHHHHHhhhhh-------hhhhhhhcccccccccCCCCCceeHHHHHH
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSM----AKEMVEISKNIS-------NKIINRQGEITEDDSNKDRDGKINFQEFCS 224 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~----~~~l~~lg~~~~-------~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~ 224 (473)
+++...++++|..+|+ ..++ ...++.+|..++ .. +...++. .+|.|++|.|+|+||+.
T Consensus 331 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~--~~~~~~~--~~D~d~~g~i~~~Ef~~ 406 (484)
T 3nyv_A 331 QDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEH--EVDQVLD--AVDFDKNGYIEYSEFVT 406 (484)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHH--HHHHHHH--HHTCCTTSEEEHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHH--HHHHHHH--HhCCCCCCeEeHHHHHH
Confidence 4456678888988887 4555 344445555555 22 3333443 37888889999999988
Q ss_pred HHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchhc--cCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 225 IVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPEL--QQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 225 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~--~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
++... ......+.+..+|+.||.|++|+|+.+||+.++.. .....++.+|+.+|.|+||.|+|+||+.+|..+
T Consensus 407 ~~~~~----~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~ 481 (484)
T 3nyv_A 407 VAMDR----KTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481 (484)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred HHHhc----cccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence 77621 22345567888899999999999999998886432 223457888888999999999999998888654
No 167
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.28 E-value=4.9e-12 Score=103.97 Aligned_cols=100 Identities=20% Similarity=0.345 Sum_probs=79.2
Q ss_pred HhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-
Q psy4132 189 ISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE- 267 (473)
Q Consensus 189 lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~- 267 (473)
++..++.. ++..++.. +|. +|.|+|+||+.++.. .....+.++.+|+.+|.|++|+|+.+||+.+..
T Consensus 2 l~~~~s~~--ei~~~~~~--~d~--~g~i~~~eF~~~~~~------~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~ 69 (109)
T 5pal_A 2 MTKVLKAD--DINKAISA--FKD--PGTFDYKRFFHLVGL------KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKG 69 (109)
T ss_dssp GGGTSCHH--HHHHHHHH--TCS--TTCCCHHHHHHHHTC------TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHH
T ss_pred CCCcCCHH--HHHHHHHH--hCC--CCcCcHHHHHHHHhh------ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 45556655 56655543 555 899999999999873 234677899999999999999999999999543
Q ss_pred c---c---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 268 L---Q---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 268 ~---~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
+ + ....++.++..+|.|++|.|+|+||+.++..
T Consensus 70 ~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 70 FSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp HCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 2 2 2335889999999999999999999998854
No 168
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.28 E-value=8.6e-12 Score=119.01 Aligned_cols=87 Identities=20% Similarity=0.370 Sum_probs=47.8
Q ss_pred ccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-c----c-----------CCH
Q psy4132 209 SNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-L----Q-----------QNP 272 (473)
Q Consensus 209 ~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~----~-----------~~~ 272 (473)
+|.|++|.|+|+||..++.... .....+.+..+|+.+|.|++|+|+.+||..+.. . + ...
T Consensus 138 ~D~d~dG~I~~~Ef~~~l~~~~----~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~ 213 (256)
T 2jul_A 138 FDADGNGAIHFEDFVVGLSILL----RGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLE 213 (256)
T ss_dssp SSCSCCSEECSHHHHHHHHHHH----SCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHH
T ss_pred hccCCCCcCcHHHHHHHHHHHh----ccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHH
Confidence 5666666666666666554211 112344566666666666666666666665321 1 1 112
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 273 LVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 273 ~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
.++.+|..+|.|++|.|+|+||+.++.
T Consensus 214 ~~~~~f~~~D~d~dG~Is~~Ef~~~~~ 240 (256)
T 2jul_A 214 HVERFFQKMDRNQDGVVTIDEFLETCQ 240 (256)
T ss_dssp HHHHHHHHSCCSTTCSBCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 355666666666666666666666554
No 169
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=99.27 E-value=6.4e-12 Score=103.20 Aligned_cols=100 Identities=21% Similarity=0.311 Sum_probs=80.9
Q ss_pred HhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-
Q psy4132 189 ISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE- 267 (473)
Q Consensus 189 lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~- 267 (473)
+|.+++.. ++..++.. +| ++|.|+|+||+.++.. .....+.++.+|+.+|.|++|+|+.+||+.+..
T Consensus 2 lg~~~t~~--e~~~~~~~--~d--~~g~i~~~eF~~~~~~------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~ 69 (109)
T 1rwy_A 2 MTDLLSAE--DIKKAIGA--FT--AADSFDHKKFFQMVGL------KKKSADDVKKVFHILDKDKSGFIEEDELGSILKG 69 (109)
T ss_dssp HHHHSCHH--HHHHHHHT--TC--STTCCCHHHHHHHHTG------GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHH
T ss_pred CCCcCCHH--HHHHHHHH--cC--CCCcEeHHHHHHHHhc------CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH
Confidence 56777776 66666654 56 8899999999999862 245678899999999999999999999999643
Q ss_pred c---c---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 268 L---Q---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 268 ~---~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
. + ....++.++..+|.|++|.|+|+||+.++..
T Consensus 70 ~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 70 FSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred HhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 3 2 2335889999999999999999999998753
No 170
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=99.27 E-value=1.2e-11 Score=126.28 Aligned_cols=131 Identities=24% Similarity=0.399 Sum_probs=104.9
Q ss_pred hHHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHcccccccc
Q psy4132 162 QKETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKK 234 (473)
Q Consensus 162 ~~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~ 234 (473)
..+....++++|..+|+ ..++...|..++..++.. +...++. .+|.|++|.|+|+||+.++.... .
T Consensus 307 s~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~e--el~~Lf~--~~D~DgdG~IsfeEFl~ll~~~~---~ 379 (450)
T 3sg6_A 307 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA--ELQDMIN--EVDADGNGTIDFPEFLTMMARKM---K 379 (450)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHH--HHHHHHH--TTCTTSSSSEEHHHHHHHHHC------
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHH--HHHHHHH--HhccCCCCcccHHHHHHHHHhhc---c
Confidence 34456789999999998 788889999999888776 5666655 38999999999999999887321 1
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
.....+.++.+|+.+|.|++|+|+.+||+.++ ..+ ....++.++..+|.|++|.|+|+||+.++.
T Consensus 380 ~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~ 448 (450)
T 3sg6_A 380 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448 (450)
T ss_dssp ---CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred ccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 23345689999999999999999999999964 232 234588999999999999999999999874
No 171
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=99.26 E-value=2.3e-11 Score=106.89 Aligned_cols=125 Identities=18% Similarity=0.231 Sum_probs=90.6
Q ss_pred ccCCCCCceeHHHHHHHHcc---ccccccchHHHHHH--------HHHHHhhCCCCCCCccHHHHhcchhcc---C----
Q psy4132 209 SNKDRDGKINFQEFCSIVGN---TDIHKKMVVDIRRL--------GKRFRKLDLDNSGALSIDEFMSLPELQ---Q---- 270 (473)
Q Consensus 209 ~D~d~dG~I~f~EF~~~~~~---~~~~~~~~~~~~~l--------~~~F~~~D~d~~G~Is~~el~~l~~~~---~---- 270 (473)
+|.|++|.|+++||..++.. .............+ ..+|+.+|.+++|.|+.+||..+.... .
T Consensus 13 ~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~ 92 (166)
T 3akb_A 13 FDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRF 92 (166)
T ss_dssp HCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHH
T ss_pred HcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCccch
Confidence 68899999999999887531 11112223333333 477999999999999999998853211 1
Q ss_pred ----CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHh
Q psy4132 271 ----NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALI 339 (473)
Q Consensus 271 ----~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~ 339 (473)
...+..+|+.+|.|++|.|+++||..++.... ..++.+..+|+.+|.|++|.++. +|+..++.
T Consensus 93 ~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~---~~~~~~~~~~~~~D~d~dg~i~~---~ef~~~~~ 159 (166)
T 3akb_A 93 AEMARPFLHAALGVADTDGDGAVTVADTARALTAFG---VPEDLARQAAAALDTDGDGKVGE---TEIVPAFA 159 (166)
T ss_dssp HHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT---CCHHHHHHHHHHHCTTCSSBCCH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC---CCHHHHHHHHHHhCCCCCCcCcH---HHHHHHHH
Confidence 11267889999999999999999999988763 67788999999999999866666 34444443
No 172
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=99.26 E-value=5.2e-12 Score=103.79 Aligned_cols=100 Identities=18% Similarity=0.284 Sum_probs=80.4
Q ss_pred HHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-
Q psy4132 188 EISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP- 266 (473)
Q Consensus 188 ~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~- 266 (473)
++|.+++.. ++..++.. +| ++|.|+|+||+.++.. .......++.+|+.+|.|++|+|+.+||+.+.
T Consensus 2 slg~~~~~~--e~~~~~~~--~d--~~g~i~~~eF~~~~~~------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~ 69 (109)
T 1bu3_A 2 AFSGILADA--DVAAALKA--CE--AADSFNYKAFFAKVGL------TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQ 69 (109)
T ss_dssp CCSCSSCHH--HHHHHHHH--TC--STTCCCHHHHHHHHTG------GGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHH
T ss_pred cccccCCHH--HHHHHHHH--hC--CCCcCcHHHHHHHHHc------ChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 356677766 66666654 55 8899999999998862 23467889999999999999999999999953
Q ss_pred hc---c---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 267 EL---Q---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 267 ~~---~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
.. + ....++.++..+|.|++|.|+|+||+.++.
T Consensus 70 ~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 70 VFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp HHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred HHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 33 2 234588999999999999999999998774
No 173
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=99.25 E-value=5.2e-12 Score=115.46 Aligned_cols=127 Identities=18% Similarity=0.218 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccch
Q psy4132 164 ETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMV 236 (473)
Q Consensus 164 ~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~ 236 (473)
+....++++|..+|. ..++...|+.+|..++.. ++..++.. + +|.|+|+||+.++.... ...
T Consensus 54 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~--~~~~l~~~--~----~g~i~~~eF~~~~~~~~---~~~ 122 (196)
T 3dtp_E 54 HQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQ--ELDSMVAE--A----PGPINFTMFLTIFGDRI---AGT 122 (196)
T ss_dssp TTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHH--HHHHHHTT--S----SSCCBHHHHHHHHHHCC---CSS
T ss_pred HHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHH--HHHHHHHH--c----cCCCcHHHHHHHHHHHh---cCC
Confidence 345579999999998 788888999999888876 55555443 2 89999999999987321 123
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcchhccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.....+..+|+.||.|++|+|+.+||+.++.++. ...++.++..+|.|++|.|+|+||+.+|...
T Consensus 123 ~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 190 (196)
T 3dtp_E 123 DEEDVIVNAFNLFDEGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKG 190 (196)
T ss_dssp CCHHHHHHHHHTTCSSSSCCBHHHHHHHHHHSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSSC
T ss_pred CcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcC
Confidence 3467899999999999999999999999654432 2358899999999999999999999998654
No 174
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.25 E-value=1.5e-11 Score=113.64 Aligned_cols=119 Identities=18% Similarity=0.311 Sum_probs=92.2
Q ss_pred cccCC-CCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-ccC---CHHHHHHHHHhc
Q psy4132 208 DSNKD-RDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQ---NPLVQRVIDIFD 282 (473)
Q Consensus 208 ~~D~d-~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~~---~~~~~~l~~~~D 282 (473)
.+|.+ ++|.|+.+||..++.... ........+..+|+.+|.|++|.|+..||..++. ... ...+..+|+.+|
T Consensus 27 ~fD~~~~~G~is~~El~~~l~~~~---~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D 103 (211)
T 2ggz_A 27 TFMMEYPSGLQTLHEFKTLLGLQG---LNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYD 103 (211)
T ss_dssp SHHHHCTTSEEEHHHHHHHTTCCS---CCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHC
T ss_pred HHHHhCCCCcCCHHHHHHHHHHhC---CCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhc
Confidence 36766 899999999999886311 1234456789999999999999999999998543 221 224788999999
Q ss_pred CCCCCcccHHHHHHHHhhcc-----cCCCcHHHHHHHhHHhcCCCCchhhHh
Q psy4132 283 EDRNGEVDFKEFIQGVSQFS-----VKGDRESKLKFAFRIYDIDNDDDYYQA 329 (473)
Q Consensus 283 ~d~dG~I~~~EF~~~l~~~~-----~~~~~~e~l~~~F~~~D~d~dg~~~~~ 329 (473)
.|++|.|+++||..++.... .....++.+..+|+.+|.|++|.++..
T Consensus 104 ~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~ 155 (211)
T 2ggz_A 104 ADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLE 155 (211)
T ss_dssp TTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHH
T ss_pred CCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHH
Confidence 99999999999999998764 233445678999999999999666653
No 175
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=99.24 E-value=1.8e-11 Score=112.80 Aligned_cols=131 Identities=18% Similarity=0.314 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKM 235 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~ 235 (473)
.+....++++|..+|. ..++.. +..++.+++.. + .+ ..+|.+++|.|+|+||+.++.........
T Consensus 25 ~~~~~~l~~~F~~~D~d~dG~Is~~El~~-~~~lg~~~~~~--~---l~--~~~d~~~~g~i~~~EF~~~~~~~~~~~~~ 96 (208)
T 2ct9_A 25 HSQITRLYSRFTSLDKGENGTLSREDFQR-IPELAINPLGD--R---II--NAFFSEGEDQVNFRGFMRTLAHFRPIEDN 96 (208)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECTGGGGG-CHHHHTSTTHH--H---HH--HTTSCTTCSCEEHHHHHHHHHTTSCCC--
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHH-HHHcCCCCcHH--H---HH--HHHcCCCCCcCcHHHHHHHHHhhccccch
Confidence 4456679999999997 445544 34677766533 2 22 23789999999999999988732211000
Q ss_pred ------------hHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-c-cC---CHHHHHH----HHHhcCCCCCcccHHHH
Q psy4132 236 ------------VVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-L-QQ---NPLVQRV----IDIFDEDRNGEVDFKEF 294 (473)
Q Consensus 236 ------------~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~-~~---~~~~~~l----~~~~D~d~dG~I~~~EF 294 (473)
....+.++.+|+.+|.|++|+|+.+||+.+.. . +. ...++.+ +..+|.|++|.|+|+||
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF 176 (208)
T 2ct9_A 97 EKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEF 176 (208)
T ss_dssp ---------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHH
T ss_pred hhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 12678899999999999999999999999643 2 32 2234455 99999999999999999
Q ss_pred HHHHhhc
Q psy4132 295 IQGVSQF 301 (473)
Q Consensus 295 ~~~l~~~ 301 (473)
+.++...
T Consensus 177 ~~~~~~~ 183 (208)
T 2ct9_A 177 VKVLEKV 183 (208)
T ss_dssp HHTTTTS
T ss_pred HHHHhcc
Confidence 9988654
No 176
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=99.24 E-value=5.5e-12 Score=117.44 Aligned_cols=133 Identities=17% Similarity=0.190 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHH-Hhhhhhhhhhhhhcccccc------cc-cCCCCCceeHHHHHHHHc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVE-ISKNISNKIINRQGEITED------DS-NKDRDGKINFQEFCSIVG 227 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~-lg~~~~~~~~~~~~~~~~~------~~-D~d~dG~I~f~EF~~~~~ 227 (473)
.+....++++|..+|. ..++...|.. +|..++.. ++..++... .+ |.|++|.|+|.||+.++.
T Consensus 44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~~~ 121 (219)
T 3cs1_A 44 AEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTS--RVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRL 121 (219)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCS--CHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHH--HHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHH
Confidence 4456779999999998 6778788877 78777654 333322110 01 347899999999998765
Q ss_pred cccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hc----cCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 228 NTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-EL----QQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 228 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~----~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.. ........+..+|+.+|.|++|+|+.+||+.++ .+ .....++.+|..+|.|++|.|+|+||+.++...
T Consensus 122 ~~----~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 196 (219)
T 3cs1_A 122 ML----CYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASAV 196 (219)
T ss_dssp HH----HHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHHHHHHHHHHH
T ss_pred HH----hccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 21 112345789999999999999999999999953 22 234458999999999999999999999988653
No 177
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=99.24 E-value=1.1e-11 Score=101.62 Aligned_cols=99 Identities=22% Similarity=0.324 Sum_probs=78.8
Q ss_pred HhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-
Q psy4132 189 ISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE- 267 (473)
Q Consensus 189 lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~- 267 (473)
|+.+++.. +++.++.. +| ++|.|+|+||+.++.. .......++.+|+.+|.|++|+|+.+||+.+..
T Consensus 2 l~~~~t~~--e~~~~~~~--~d--~~g~i~~~eF~~~~~~------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~ 69 (108)
T 1rro_A 2 ITDILSAE--DIAAALQE--CQ--DPDTFEPQKFFQTSGL------SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQK 69 (108)
T ss_dssp GGGTSCHH--HHHHHHHH--TC--STTCCCHHHHHHHHSG------GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGG
T ss_pred ccccCCHH--HHHHHHHH--cc--CCCCcCHHHHHHHHhc------CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 45566666 66666553 55 8899999999998862 234677899999999999999999999999643
Q ss_pred c---c---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 268 L---Q---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 268 ~---~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
+ + ....++.++..+|.+++|.|+|+||+.++.
T Consensus 70 ~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 70 FQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp TCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred HhhccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 3 1 233588999999999999999999998774
No 178
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=99.23 E-value=4.9e-12 Score=110.23 Aligned_cols=127 Identities=14% Similarity=0.258 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccc
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKM 235 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~ 235 (473)
.+....++++|..+|+ ..++...|+.+|..++.. ++..++.. + +|.|+|+||+.++.... ..
T Consensus 12 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~--~~~~~~~~--~----~g~i~~~eF~~~~~~~~---~~ 80 (153)
T 2ovk_B 12 QRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDD--ELNAMLKE--C----PGQLNFTAFLTLFGEKV---SG 80 (153)
T ss_dssp HHHHHHHHHHHHHHCCSTTTCCCHHHHHHHTTTTTSCCCHH--HHHHHHHH--S----SSCCCSHHHHHTTTTTT---TT
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHhCCCCCHH--HHHHHHHH--c----CCCCCHHHHHHHHHHHh---cc
Confidence 4455689999999998 678888888888888776 55555443 2 88999999999887321 11
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
......+..+|+.+|.|++|+|+.+||+.++ ..+ ....++.++..+|. ++|.|+|+||+.++...
T Consensus 81 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~I~~~eF~~~~~~~ 149 (153)
T 2ovk_B 81 TDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPL-KNKQFNYNKMVDIKGKA 149 (153)
T ss_dssp CCCTTHHHHHHHTTCSSCSSCCCHHHHHHHHHHSSSCCCHHHHHHHHHHCCE-ETTEECHHHHHHHHHCS
T ss_pred CChHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCC-CCCEEeHHHHHHHHhcC
Confidence 2345678999999999999999999999964 333 23458899999999 99999999999998653
No 179
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.23 E-value=1.5e-11 Score=128.29 Aligned_cols=133 Identities=21% Similarity=0.378 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHH----HHHHHHhhhhhhh--------hhhhhcccccccccCCCCCceeHHHHH
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMA----KEMVEISKNISNK--------IINRQGEITEDDSNKDRDGKINFQEFC 223 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~----~~l~~lg~~~~~~--------~~~~~~~~~~~~~D~d~dG~I~f~EF~ 223 (473)
.+...+++++|..+|+ ..|+. ..++.+|..++.. ..++..++. .+|.|++|.|+|+||+
T Consensus 327 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~D~d~dG~I~~~Ef~ 404 (486)
T 3mwu_A 327 LDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMP--LLDMDGSGSIEYSEFI 404 (486)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHH--HHCTTCCSSBCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHH--HhcCCCCCcCcHHHHH
Confidence 4566789999999998 45553 3344555554411 113333443 3799999999999999
Q ss_pred HHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 224 SIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
..+... ......+.+..+|+.||.|++|+|+.+||+.++. .+ ....++.+|..+|.|+||.|+|+||+.++.
T Consensus 405 ~~~~~~----~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~ 480 (486)
T 3mwu_A 405 ASAIDR----TILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480 (486)
T ss_dssp HHHSCT----TTTCCHHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHH
T ss_pred HHHHhh----hccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 987632 2223456799999999999999999999998643 22 234578999999999999999999999987
Q ss_pred hc
Q psy4132 300 QF 301 (473)
Q Consensus 300 ~~ 301 (473)
.+
T Consensus 481 ~~ 482 (486)
T 3mwu_A 481 NF 482 (486)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 180
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=99.23 E-value=5.3e-12 Score=108.38 Aligned_cols=103 Identities=13% Similarity=0.035 Sum_probs=57.6
Q ss_pred CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccc
Q psy4132 271 NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTML 350 (473)
Q Consensus 271 ~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~ 350 (473)
.|.+.+++..+|.|++|.|+|+||+.++..........+.++.+|+.||+|++|.+.. +++..++..
T Consensus 2 ~p~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~---~el~~~l~~---------- 68 (135)
T 3h4s_E 2 EPTEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITA---ESLRRNSGI---------- 68 (135)
T ss_dssp -----------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCH---HHHHHHGGG----------
T ss_pred ChhHHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCH---HHHHHHHHH----------
Confidence 4567789999999999999999999998775444455688999999999999955554 344444432
Q ss_pred hhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 351 LTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 351 l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
. |.+.++.+++..+++.+|.|+||.|+++||...+.
T Consensus 69 ----------~-g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~ 104 (135)
T 3h4s_E 69 ----------L-GIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMV 104 (135)
T ss_dssp ----------G-TCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHH
T ss_pred ----------h-CCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 1 21248899999999999999999999999987765
No 181
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.21 E-value=4.2e-11 Score=108.08 Aligned_cols=160 Identities=19% Similarity=0.211 Sum_probs=116.2
Q ss_pred CCCCCccHHHHhcchhc--cCCHHHHHHHHHhcCC-CCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhH
Q psy4132 252 DNSGALSIDEFMSLPEL--QQNPLVQRVIDIFDED-RNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQ 328 (473)
Q Consensus 252 d~~G~Is~~el~~l~~~--~~~~~~~~l~~~~D~d-~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~ 328 (473)
++.+.|+.+++..+... .....+..++..+|.+ ++|.|+++||..++..+.....+.+.+..+|+.+|.|++|.+..
T Consensus 3 ~~~~~l~~~~l~~l~~~~~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~ 82 (190)
T 1fpw_A 3 AKTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHF 82 (190)
T ss_dssp CCSCCSTTHHHHHHTTTCCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECH
T ss_pred cccCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeH
Confidence 45678888998886533 2344688999999987 89999999999999887544556677999999999999965555
Q ss_pred hhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccceee----e----
Q psy4132 329 ALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVL----Q---- 400 (473)
Q Consensus 329 ~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl----~---- 400 (473)
. |+...+. .... ..+.+++..+|+.+|.|++|.|+++||...+..+ .
T Consensus 83 ~---ef~~~~~--------------------~~~~--~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~ 137 (190)
T 1fpw_A 83 E---EFITVLS--------------------TTSR--GTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVT 137 (190)
T ss_dssp H---HHHHHHH--------------------HHSC--CCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTS
T ss_pred H---HHHHHHH--------------------HHcc--CCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccC
Confidence 3 3333332 2211 2567789999999999999999999999877642 1
Q ss_pred --ecccCcHHHHHHHHHHHhh--CCCCCHHHHHHhhCCcH
Q psy4132 401 --LKSCEDASFVEKTYEIVSQ--NVFVTVEQFSRLASVSL 436 (473)
Q Consensus 401 --~~~~~~~~~~~~~~~~~~~--~~~ls~~e~a~~~~~s~ 436 (473)
.........+..+++.++. +|.||..||.+.+.-..
T Consensus 138 ~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 177 (190)
T 1fpw_A 138 LNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDP 177 (190)
T ss_dssp SSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSST
T ss_pred cccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCh
Confidence 0111234556777777654 57899999998875443
No 182
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.20 E-value=7.3e-12 Score=133.88 Aligned_cols=132 Identities=10% Similarity=0.083 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHH
Q psy4132 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKF 313 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~ 313 (473)
....++++|+.||.|++|+|+.+||+.++ .++. ...++.+|+.+|.|++|.|+|+||+.++..+.. ++.++.
T Consensus 9 ~e~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~----~~el~~ 84 (624)
T 1djx_A 9 LQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ----RAEIDR 84 (624)
T ss_dssp -----------------------------------------------------------CTTHHHHHHTC----CHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc----HHHHHH
Confidence 34578999999999999999999999853 3332 235789999999999999999999999987632 367999
Q ss_pred HhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccC----CCCCeeH
Q psy4132 314 AFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKL----PDSPIYL 389 (473)
Q Consensus 314 ~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~----~dg~Is~ 389 (473)
+|+.||.+ +|.++ ..|+...+....|...++++++.++++.+|.+ ++|.|++
T Consensus 85 aF~~fD~~-~G~Is-----------------------~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~ 140 (624)
T 1djx_A 85 AFEEAAGS-AETLS-----------------------VERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTK 140 (624)
T ss_dssp HHHHHHTT-SSSEE-----------------------HHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECH
T ss_pred HHHHhcCC-CCeec-----------------------HHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCH
Confidence 99999974 53333 33443333333332237899999999999998 7999999
Q ss_pred Hhhhccce
Q psy4132 390 KTYSSGVK 397 (473)
Q Consensus 390 ~EF~~~~~ 397 (473)
+||...+.
T Consensus 141 deF~~~L~ 148 (624)
T 1djx_A 141 DGFLMYLL 148 (624)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99987665
No 183
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=99.18 E-value=2.7e-11 Score=103.94 Aligned_cols=91 Identities=12% Similarity=0.161 Sum_probs=60.7
Q ss_pred cccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc----CCHHHHHHHHHhc
Q psy4132 208 DSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ----QNPLVQRVIDIFD 282 (473)
Q Consensus 208 ~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~----~~~~~~~l~~~~D 282 (473)
.+|.|++|.|+|+||+.++... .......+.++.+|+.||.|++|+|+.+||+.++ .++ ....++.++..+|
T Consensus 11 ~~D~d~~G~I~~~EF~~~~~~~---~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D 87 (135)
T 3h4s_E 11 ETTSTTKMETKYEDMLPVMAEK---MDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGD 87 (135)
T ss_dssp --------CCCC--------------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHC
T ss_pred HHcCCCCCcEeHHHHHHHHHHH---ccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhC
Confidence 4899999999999999988732 1234456889999999999999999999999954 333 2235899999999
Q ss_pred CCCCCcccHHHHHHHHhhc
Q psy4132 283 EDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 283 ~d~dG~I~~~EF~~~l~~~ 301 (473)
.|++|.|+|+||+.++...
T Consensus 88 ~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 88 LDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp SSCSSSBCHHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHh
Confidence 9999999999999998765
No 184
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=99.17 E-value=5.4e-11 Score=107.22 Aligned_cols=126 Identities=13% Similarity=0.100 Sum_probs=92.1
Q ss_pred HHHHHHHHHHhhhh-----hhhHHHHHHHHhhhhhhhhhhhhccccccccc---CCCCCceeHHHHHHHHccccccccch
Q psy4132 165 TSSNINNAFKDLNQ-----LMSMAKEMVEISKNISNKIINRQGEITEDDSN---KDRDGKINFQEFCSIVGNTDIHKKMV 236 (473)
Q Consensus 165 ~~~~l~eaF~~lD~-----~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D---~d~dG~I~f~EF~~~~~~~~~~~~~~ 236 (473)
...+++++|..||. ..++.. .+|..++.. ....++.. +| .+++|.|+|.||..++... ...
T Consensus 26 ~~~~~~~~F~~~D~dG~I~~~el~~---~lg~~~~~~--~~~~i~~~--~d~~~~~~~~~i~~~ef~~~~~~~----~~~ 94 (179)
T 3a8r_A 26 GWAAVEKRFNQLQVDGVLLRSRFGK---CIGMDGSDE--FAVQMFDS--LARKRGIVKQVLTKDELKDFYEQL----TDQ 94 (179)
T ss_dssp CHHHHHHHHHHHCBTTBEEGGGHHH---HHTCCSCHH--HHHHHHHH--HHHHHTCCSSEECHHHHHHHHHHH----HCC
T ss_pred hHHHHHHHHhccCCCCCCcHHHHHH---HHCCCCcHH--HHHHHHHH--HHHhccCCCCCcCHHHHHHHHHHH----cCC
Confidence 35689999999995 455554 346665544 23333321 33 4667889999999887521 112
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcch--hccCC----------HHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLP--ELQQN----------PLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~--~~~~~----------~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
...+.++.+|+.||.|++|+|+.+||+.++ .++.. ..++.++..+|.|++|.|+|+||+.++...
T Consensus 95 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 171 (179)
T 3a8r_A 95 GFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQS 171 (179)
T ss_dssp CHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 456789999999999999999999999965 34433 247899999999999999999999988654
No 185
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=99.17 E-value=1e-10 Score=95.91 Aligned_cols=99 Identities=19% Similarity=0.193 Sum_probs=76.5
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccch
Q psy4132 272 PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLL 351 (473)
Q Consensus 272 ~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l 351 (473)
..++.+++.+| ++|.|+|+||+.++.. .....+.++.+|+.||.|++|.+.. +++..++.....
T Consensus 10 ~ei~~~~~~~D--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~---~el~~~l~~~~~-------- 73 (109)
T 3fs7_A 10 KDIESALSSCQ--AADSFNYKSFFSTVGL---SSKTPDQIKKVFGILDQDKSGFIEE---EELQLFLKNFSS-------- 73 (109)
T ss_dssp HHHHHHHHHTC--STTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHSTTCSSSBCH---HHHHTTGGGTCT--------
T ss_pred HHHHHHHHhcC--CCCcCcHHHHHHHHhc---CCCcHHHHHHHHHHHCCCCCCeEeH---HHHHHHHHHHhc--------
Confidence 45788999998 7999999999999865 3557889999999999999965555 344444432100
Q ss_pred hHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 352 TDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 352 ~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
.| ..++++++..+++.+|.|+||.|+++||...++
T Consensus 74 ----------~~-~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 74 ----------SA-RVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp ----------TS-CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred ----------cc-ccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 02 248899999999999999999999999987653
No 186
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=99.17 E-value=3.4e-11 Score=108.37 Aligned_cols=146 Identities=13% Similarity=0.145 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHhhhh-------hhhHHHHHHHH------hhhhhhhhhhhhccc-------ccccccCCCCCceeHHHH
Q psy4132 163 KETSSNINNAFKDLNQ-------LMSMAKEMVEI------SKNISNKIINRQGEI-------TEDDSNKDRDGKINFQEF 222 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~-------~~e~~~~l~~l------g~~~~~~~~~~~~~~-------~~~~~D~d~dG~I~f~EF 222 (473)
.+....++++|..+|+ ..++...|+.+ |..++.. ++..++ ....+|.|++|.|+|+|
T Consensus 10 ~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~--~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E- 86 (186)
T 2hps_A 10 AYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEE--TRQEFLRVADQLGLAPGVRISVEEAAVNAT- 86 (186)
T ss_dssp HHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHH--HHHHHHHHHHHHTCCTTCEEEHHHHHHHHH-
T ss_pred HHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcH--HHHHHHHHHHHHHHHHhcCCCCCCcccHHH-
Confidence 3445679999999998 67777778776 7777655 444332 02358999999999999
Q ss_pred HHHHccccccccchHHHHHHHHHH--HhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHH
Q psy4132 223 CSIVGNTDIHKKMVVDIRRLGKRF--RKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQ 296 (473)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~F--~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~ 296 (473)
.++... .........+..+| ..||.|++|+|+.+||+.+. ..+ ....+..+|..+|.|++|.|+|+||+.
T Consensus 87 -~~~~~~---~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~ 162 (186)
T 2hps_A 87 -DSLLKM---KGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLV 162 (186)
T ss_dssp -HHHHHC---CTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred -HHHHHh---cCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHH
Confidence 444311 11223344566666 88899999999999999964 233 233588999999999999999999999
Q ss_pred HHhhcccCCCcHHHHHHHh
Q psy4132 297 GVSQFSVKGDRESKLKFAF 315 (473)
Q Consensus 297 ~l~~~~~~~~~~e~l~~~F 315 (473)
++........+......+|
T Consensus 163 ~~~~~~~~~~~~~~~~~l~ 181 (186)
T 2hps_A 163 TVNDFLFGLEETALANAFY 181 (186)
T ss_dssp HHHHHHHCSSCCHHHHHHT
T ss_pred HHHHHhcCCCCCCcccccc
Confidence 9877644333333333333
No 187
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.15 E-value=1.8e-10 Score=94.45 Aligned_cols=100 Identities=24% Similarity=0.278 Sum_probs=76.5
Q ss_pred CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccc
Q psy4132 271 NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTML 350 (473)
Q Consensus 271 ~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~ 350 (473)
...++.+++.+|. +|.|+|+||+.++.. .....+.++.+|+.||+|++|.+... ++..++.....
T Consensus 8 ~~ei~~~~~~~d~--~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~~---el~~~l~~~~~------- 72 (109)
T 5pal_A 8 ADDINKAISAFKD--PGTFDYKRFFHLVGL---KGKTDAQVKEVFEILDKDQSGFIEEE---ELKGVLKGFSA------- 72 (109)
T ss_dssp HHHHHHHHHHTCS--TTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHCTTCSSEECHH---HHHTHHHHHCT-------
T ss_pred HHHHHHHHHHhCC--CCcCcHHHHHHHHhh---ccCcHHHHHHHHHHHCCCCCCcCcHH---HHHHHHHHHHH-------
Confidence 3457889999987 899999999998864 35577899999999999999665553 33333332100
Q ss_pred hhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 351 LTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 351 l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
.| ..++++++..+++.+|.|+||.|+++||...++
T Consensus 73 -----------~g-~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 73 -----------HG-RDLNDTETKALLAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp -----------TC-CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred -----------cC-CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 02 248899999999999999999999999987653
No 188
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=99.14 E-value=1.3e-10 Score=107.82 Aligned_cols=124 Identities=17% Similarity=0.279 Sum_probs=88.8
Q ss_pred HHHHHHHHHhhhh---------------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCc-eeHHHHHHHHccc
Q psy4132 166 SSNINNAFKDLNQ---------------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGK-INFQEFCSIVGNT 229 (473)
Q Consensus 166 ~~~l~eaF~~lD~---------------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~-I~f~EF~~~~~~~ 229 (473)
...+.++|..+|. ..++.. |..++.++... ++ + ..+|.|++|. |+|+||+.++...
T Consensus 50 i~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~~--~l---f--~~~D~d~dG~~I~f~EF~~~~~~~ 121 (214)
T 2l4h_A 50 ILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE--RI---C--RVFSTSPAKDSLSFEDFLDLLSVF 121 (214)
T ss_dssp HHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTHH--HH---H--HHHCCSSSCCSEEHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHHH--HH---H--HHhCcCCCCCEecHHHHHHHHHHH
Confidence 3456667776653 233444 66677666543 22 2 2368999999 9999999988732
Q ss_pred cccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-c--------cCCHHH----HHHHHHhcCCCCCcccHHHHHH
Q psy4132 230 DIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-L--------QQNPLV----QRVIDIFDEDRNGEVDFKEFIQ 296 (473)
Q Consensus 230 ~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~--------~~~~~~----~~l~~~~D~d~dG~I~~~EF~~ 296 (473)
. ......+.++.+|+.||.|++|+|+.+||+.+.. + .....+ +.++..+|.|++|.|+|+||+.
T Consensus 122 ~---~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~ 198 (214)
T 2l4h_A 122 S---DTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 198 (214)
T ss_dssp S---SCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHH
T ss_pred c---CCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHH
Confidence 1 1223467899999999999999999999998532 2 122333 3599999999999999999999
Q ss_pred HHhh
Q psy4132 297 GVSQ 300 (473)
Q Consensus 297 ~l~~ 300 (473)
++..
T Consensus 199 ~~~~ 202 (214)
T 2l4h_A 199 VISR 202 (214)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8864
No 189
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=99.11 E-value=8.3e-11 Score=105.72 Aligned_cols=125 Identities=17% Similarity=0.270 Sum_probs=88.2
Q ss_pred HHHHHHHHHHhhhh---------------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCc-eeHHHHHHHHcc
Q psy4132 165 TSSNINNAFKDLNQ---------------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGK-INFQEFCSIVGN 228 (473)
Q Consensus 165 ~~~~l~eaF~~lD~---------------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~-I~f~EF~~~~~~ 228 (473)
....+.++|..+|. ..++.. |+.+|.+++.. + ++. .+|.+++|. |+|+||+.++..
T Consensus 18 ~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~--~---l~~--~~D~d~~G~~I~~~EF~~~~~~ 89 (183)
T 1dgu_A 18 EILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE--R---ICR--VFSTSPAKDSLSFEDFLDLLSV 89 (183)
T ss_dssp HHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHH--H---HHH--HHSCSSSSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHH--H---HHH--HhCCCCCCCEecHHHHHHHHHH
Confidence 34568899998875 133444 55555555433 2 222 368899999 999999998873
Q ss_pred ccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC-----C---HHHH----HHHHHhcCCCCCcccHHHHH
Q psy4132 229 TDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ-----N---PLVQ----RVIDIFDEDRNGEVDFKEFI 295 (473)
Q Consensus 229 ~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~-----~---~~~~----~l~~~~D~d~dG~I~~~EF~ 295 (473)
.. ........++.+|+.+|.|++|+|+.+||+.+. ..+. . ..++ .++..+|.|++|.|+|+||+
T Consensus 90 ~~---~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~ 166 (183)
T 1dgu_A 90 FS---DTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQ 166 (183)
T ss_dssp HS---TTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHH
T ss_pred hc---CCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence 21 112345689999999999999999999999853 3322 1 1233 48999999999999999999
Q ss_pred HHHhh
Q psy4132 296 QGVSQ 300 (473)
Q Consensus 296 ~~l~~ 300 (473)
.++..
T Consensus 167 ~~~~~ 171 (183)
T 1dgu_A 167 HVISR 171 (183)
T ss_dssp HHHCS
T ss_pred HHHHh
Confidence 88854
No 190
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=99.11 E-value=1.2e-10 Score=100.48 Aligned_cols=121 Identities=10% Similarity=0.171 Sum_probs=93.2
Q ss_pred HHHHHHHHHhhhh--------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchH
Q psy4132 166 SSNINNAFKDLNQ--------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVV 237 (473)
Q Consensus 166 ~~~l~eaF~~lD~--------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~ 237 (473)
...++++|..+|. ..++...|+.+|..++.. ++...+.. +|.+ |+|+||+.++.... ....
T Consensus 13 ~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~--~~~~l~~~--~d~~----i~~~eF~~~~~~~~---~~~~ 81 (146)
T 2qac_A 13 KVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSI--DEKKIKEL--YGDN----LTYEQYLEYLSICV---HDKD 81 (146)
T ss_dssp HSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHH--HHHHHHHH--HCSE----ECHHHHHHHHHHTC---CTTC
T ss_pred HHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHH--HHHHHHHH--hCCC----CCHHHHHHHHHHHh---cCcc
Confidence 3468999999986 467778888888888766 55555543 4554 99999999887321 1233
Q ss_pred HHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
....+..+|+.+|.|++|+|+.+||+.+. ..+ ....++.++..+ |++|.|+|+||+.++.
T Consensus 82 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 82 NVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp CHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred hHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 56789999999999999999999999864 333 233578899988 9999999999998874
No 191
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=99.10 E-value=3.6e-10 Score=92.48 Aligned_cols=98 Identities=18% Similarity=0.123 Sum_probs=74.8
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccch
Q psy4132 272 PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLL 351 (473)
Q Consensus 272 ~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l 351 (473)
..++.+++.+| ++|.|+|+||+.++... ....+.++.+|+.||.|++|.+.. +++..++.....
T Consensus 9 ~e~~~l~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~---~el~~~l~~~~~-------- 72 (108)
T 2pvb_A 9 ADVAAALAACS--AADSFKHKEFFAKVGLA---SKSLDDVKKAFYVIDQDKSGFIEE---DELKLFLQNFSP-------- 72 (108)
T ss_dssp HHHHHHHHHTC--STTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHCTTCSSSBCH---HHHHTGGGGTCT--------
T ss_pred HHHHHHHHHhC--CCCcCcHHHHHHHHhCC---hhHHHHHHHHHHHHCCCCCCcCCH---HHHHHHHHHHhc--------
Confidence 45778899988 78999999999988542 456788999999999999955555 344444332100
Q ss_pred hHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccc
Q psy4132 352 TDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGV 396 (473)
Q Consensus 352 ~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~ 396 (473)
.| ..++++++..+++.+|.|+||.|+++||...+
T Consensus 73 ----------~g-~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~ 106 (108)
T 2pvb_A 73 ----------SA-RALTDAETKAFLADGDKDGDGMIGVDEFAAMI 106 (108)
T ss_dssp ----------TS-CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred ----------cC-CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 02 24889999999999999999999999998654
No 192
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=99.10 E-value=9.5e-12 Score=102.04 Aligned_cols=99 Identities=20% Similarity=0.305 Sum_probs=78.3
Q ss_pred HhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-
Q psy4132 189 ISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE- 267 (473)
Q Consensus 189 lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~- 267 (473)
|+.+++.. ++..++.. +| ++|.|+|+||+.++.. .....+.++.+|+.+|.|++|+|+.+||+.+..
T Consensus 2 l~~~~~~~--e~~~l~~~--~d--~~g~i~~~eF~~~~~~------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~ 69 (108)
T 2kyc_A 2 LTDILSPS--DIAAALRD--CQ--APDSFSPKKFFQISGM------SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQR 69 (108)
T ss_dssp TTSSSCHH--HHHHHHTT--SC--STTTCCHHHHHHHHTC------TTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHH
T ss_pred ccccCCHH--HHHHHHHH--cC--CCCcCCHHHHHHHHhh------CcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 45566666 66666653 55 8899999999999862 133456789999999999999999999999643
Q ss_pred c---c---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 268 L---Q---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 268 ~---~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
. + ....++.++..+|.|++|.|+|+||+.++.
T Consensus 70 ~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 70 FESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp HSSSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred HhhccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 2 2 234588999999999999999999998874
No 193
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=99.10 E-value=3.2e-10 Score=92.98 Aligned_cols=96 Identities=19% Similarity=0.149 Sum_probs=74.6
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccch
Q psy4132 272 PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLL 351 (473)
Q Consensus 272 ~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l 351 (473)
..++.++..+| ++|.|+|+||+.++... ....+.++.+|+.||.|++|.+... ++..++.
T Consensus 10 ~e~~~~~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~---el~~~l~------------ 69 (109)
T 1bu3_A 10 ADVAAALKACE--AADSFNYKAFFAKVGLT---AKSADDIKKAFFVIDQDKSGFIEED---ELKLFLQ------------ 69 (109)
T ss_dssp HHHHHHHHHTC--STTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHCTTCSSSEEHH---HHHTHHH------------
T ss_pred HHHHHHHHHhC--CCCcCcHHHHHHHHHcC---hhhHHHHHHHHHHHCCCCCCcCcHH---HHHHHHH------------
Confidence 35788899988 79999999999988543 3567889999999999999655553 3333332
Q ss_pred hHHHHHHHhhh--CCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccc
Q psy4132 352 TDAYCRINRAR--GLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGV 396 (473)
Q Consensus 352 ~d~~~~~~~~~--g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~ 396 (473)
... | ..++++++..+++.+|.|+||.|+++||...+
T Consensus 70 --------~~~~~g-~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~ 107 (109)
T 1bu3_A 70 --------VFSAGA-RALTDAETKAFLKAGDSDGDGAIGVDEWAALV 107 (109)
T ss_dssp --------HHSTTC-CCCCHHHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred --------HHcccC-CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 221 2 24889999999999999999999999998754
No 194
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=99.09 E-value=3.4e-10 Score=92.64 Aligned_cols=98 Identities=17% Similarity=0.089 Sum_probs=74.5
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccch
Q psy4132 272 PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLL 351 (473)
Q Consensus 272 ~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l 351 (473)
..++.++..+| ++|.|+|+||+.++... ....+.++.+|+.||.|++|.+.. +++..++.....
T Consensus 9 ~e~~~~~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~---~el~~~l~~~~~-------- 72 (108)
T 1rro_A 9 EDIAAALQECQ--DPDTFEPQKFFQTSGLS---KMSASQVKDIFRFIDNDQSGYLDG---DELKYFLQKFQS-------- 72 (108)
T ss_dssp HHHHHHHHHTC--STTCCCHHHHHHHHSGG---GSCHHHHHHHHHHHCTTCSSEECT---HHHHTGGGGTCT--------
T ss_pred HHHHHHHHHcc--CCCCcCHHHHHHHHhcC---cccHHHHHHHHHHhCCCCCCcCCH---HHHHHHHHHHhh--------
Confidence 35778888888 79999999999988532 356788999999999999955555 344444432110
Q ss_pred hHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccc
Q psy4132 352 TDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGV 396 (473)
Q Consensus 352 ~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~ 396 (473)
.| ..++++++..+++.+|.++||.|+++||...+
T Consensus 73 ----------~g-~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~ 106 (108)
T 1rro_A 73 ----------DA-RELTESETKSLMDAADNDGDGKIGADEFQEMV 106 (108)
T ss_dssp ----------TS-CCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHH
T ss_pred ----------cc-CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 02 24789999999999999999999999998754
No 195
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=99.09 E-value=4e-10 Score=92.28 Aligned_cols=98 Identities=24% Similarity=0.203 Sum_probs=74.6
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccch
Q psy4132 272 PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLL 351 (473)
Q Consensus 272 ~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l 351 (473)
..++.+++.+| ++|.|+|+||+.++... ....+.++.+|+.||.|++|.+... ++..++.....
T Consensus 9 ~e~~~~~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~---el~~~l~~~~~-------- 72 (109)
T 1rwy_A 9 EDIKKAIGAFT--AADSFDHKKFFQMVGLK---KKSADDVKKVFHILDKDKSGFIEED---ELGSILKGFSS-------- 72 (109)
T ss_dssp HHHHHHHHTTC--STTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHSTTCSSEECHH---HHHTHHHHHCT--------
T ss_pred HHHHHHHHHcC--CCCcEeHHHHHHHHhcC---cchHHHHHHHHHHHCCCCCCeEcHH---HHHHHHHHHhc--------
Confidence 45778888888 79999999999988542 4567889999999999999655553 33333332100
Q ss_pred hHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccc
Q psy4132 352 TDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGV 396 (473)
Q Consensus 352 ~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~ 396 (473)
.| ..++++++..+++.+|.|++|.|+++||...+
T Consensus 73 ----------~g-~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~ 106 (109)
T 1rwy_A 73 ----------DA-RDLSAKETKTLMAAGDKDGDGKIGVEEFSTLV 106 (109)
T ss_dssp ----------TC-CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred ----------cC-CCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 02 14788999999999999999999999998755
No 196
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=99.06 E-value=7.4e-10 Score=104.71 Aligned_cols=110 Identities=14% Similarity=0.181 Sum_probs=80.0
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccch
Q psy4132 272 PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLL 351 (473)
Q Consensus 272 ~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l 351 (473)
..++.+|+.||.|++|.|+|.||+.+++.+ ..+..+++++.+|+.|| |++|.++..|+.++...+..+....+-...+
T Consensus 132 ~~a~~lf~~FD~~~~G~I~f~ef~~aLs~l-~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~ 209 (261)
T 1eg3_A 132 MCLNWLLNVYDTGRTGRIRVLSFKTGIISL-CKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASF 209 (261)
T ss_dssp HHHHHHHHHHCTTCCSEEEHHHHHHHHHHT-SSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGG
T ss_pred HHHHHHHHHccCCCCceEeHHHHHHHHHHH-cCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccC
Confidence 346789999999999999999999999997 67888999999999999 9997777754444443333222222111111
Q ss_pred hHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 352 TDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 352 ~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
| +.-..+-+..+|+.+| +||.|+++||+.+++
T Consensus 210 -----------~-~~~~e~~v~~~F~~~d--~dg~It~~EFl~~~~ 241 (261)
T 1eg3_A 210 -----------G-GSNIEPSVRSCFQFAN--NKPEIEAALFLDWMR 241 (261)
T ss_dssp -----------T-CSCCHHHHHHHHHHTT--TCSCBCHHHHHHHHH
T ss_pred -----------C-CCCHHHHHHHHHHhCC--CCCcCCHHHHHHHHH
Confidence 1 0122344667899986 789999999999886
No 197
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.05 E-value=1.5e-10 Score=126.74 Aligned_cols=140 Identities=9% Similarity=0.048 Sum_probs=89.5
Q ss_pred HHHHHHHHHH--hhCCCCCCCccHHHHhcchhccCCHHHHHHHHHhcC-------CCCCcccHHHHHHHHhhcccCCCcH
Q psy4132 238 DIRRLGKRFR--KLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDE-------DRNGEVDFKEFIQGVSQFSVKGDRE 308 (473)
Q Consensus 238 ~~~~l~~~F~--~~D~d~~G~Is~~el~~l~~~~~~~~~~~l~~~~D~-------d~dG~I~~~EF~~~l~~~~~~~~~~ 308 (473)
....++++|. .||.|++|+|+..||..++... ...++.+++.+|. +++|.|+|+||+.++..+. ..
T Consensus 144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~~-~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~----~r 218 (799)
T 2zkm_X 144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPAD-RKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC----PR 218 (799)
T ss_dssp HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCSC-HHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS----CC
T ss_pred HHHHHHHHhHHhccCCCCCCeECHHHHHHHHhhh-HHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc----CH
Confidence 3456888999 8999999999999999965442 4668899999985 7889999999999998763 34
Q ss_pred HHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccC----CC
Q psy4132 309 SKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKL----PD 384 (473)
Q Consensus 309 e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~----~d 384 (473)
+.++.+|+.||.|++|.++. ++|..+|.... |.-.+.++. - ..++.+++.++++.+|.| ++
T Consensus 219 ~el~~aF~~fD~d~~g~Is~---~eL~~fL~~~Q----ge~~~~~~~-------~-~~~t~ee~~~iI~~~d~d~~~~~d 283 (799)
T 2zkm_X 219 PEIDEIFTSYHAKAKPYMTK---EHLTKFINQKQ----RDSRLNSLL-------F-PPARPDQVQGLIDKYEPSGINAQR 283 (799)
T ss_dssp HHHHTTCC--------CCCH---HHHHHHHHHTC----C-----------------------CHHHHHHHHCCC------
T ss_pred HHHHHHHHHhccCCCCeEcH---HHHHHHHHHhc----CCccccccc-------c-cCCCHHHHHHHHHHhhcccccccC
Confidence 78999999999998865555 44444444321 100011100 0 026788899999999998 89
Q ss_pred CCeeHHhhhccce
Q psy4132 385 SPIYLKTYSSGVK 397 (473)
Q Consensus 385 g~Is~~EF~~~~~ 397 (473)
|.|+++||...+.
T Consensus 284 g~is~eeF~~~L~ 296 (799)
T 2zkm_X 284 GQLSPEGMVWFLC 296 (799)
T ss_dssp --CCHHHHHHHHH
T ss_pred Cccchhhhhhccc
Confidence 9999999987765
No 198
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=99.05 E-value=6.7e-10 Score=91.07 Aligned_cols=98 Identities=21% Similarity=0.216 Sum_probs=75.0
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccch
Q psy4132 272 PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLL 351 (473)
Q Consensus 272 ~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l 351 (473)
..++.++..+| ++|.|+|+||+.++.. .....+.++.+|+.||.|++|.+.. +++..++.....
T Consensus 10 ~e~~~~~~~~d--~~g~i~~~ef~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~---~el~~~l~~~~~-------- 73 (110)
T 1pva_A 10 DDIKKALDAVK--AEGSFNHKKFFALVGL---KAMSANDVKKVFKAIDADASGFIEE---EELKFVLKSFAA-------- 73 (110)
T ss_dssp HHHHHHHHHTC--STTCCCHHHHHHHHTC---TTSCHHHHHHHHHHHCTTCSSSBCH---HHHHTGGGGTCT--------
T ss_pred HHHHHHHHhcC--CCCcCcHHHHHHHHcc---CcchHHHHHHHHHHhCCCCCCcCcH---HHHHHHHHHHhh--------
Confidence 45778888888 7899999999998843 3456788999999999999955554 344444432100
Q ss_pred hHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccc
Q psy4132 352 TDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGV 396 (473)
Q Consensus 352 ~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~ 396 (473)
.| ..++++++..+++.+|.|++|.|+++||...+
T Consensus 74 ----------~g-~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 107 (110)
T 1pva_A 74 ----------DG-RDLTDAETKAFLKAADKDGDGKIGIDEFETLV 107 (110)
T ss_dssp ----------TC-CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred ----------cC-CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 02 24889999999999999999999999998755
No 199
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.02 E-value=9.2e-10 Score=100.89 Aligned_cols=158 Identities=11% Similarity=0.106 Sum_probs=98.7
Q ss_pred CCCCCCccHHHHhcchhc-cCCH----HHHHHHHHhcCC--CCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCC
Q psy4132 251 LDNSGALSIDEFMSLPEL-QQNP----LVQRVIDIFDED--RNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDND 323 (473)
Q Consensus 251 ~d~~G~Is~~el~~l~~~-~~~~----~~~~l~~~~D~d--~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~d 323 (473)
+|++|.|+.+++..+... ...+ .+..+|..+|.| ++|.|+++||..++.. .....+..+..+|+.+|.|++
T Consensus 11 ~~~~g~l~~~el~~l~~~~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~--~~~~~~~~~~~~f~~~D~d~~ 88 (207)
T 2ehb_A 11 KNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR--NRNRRNLFADRIFDVFDVKRN 88 (207)
T ss_dssp ----------CHHHHHHHSSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS--CTTCCCHHHHHHHHHHCTTCS
T ss_pred hccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc--cccccHHHHHHHHHHhcCCCC
Confidence 467899999999886432 2222 256889999999 9999999999999875 233344567889999999998
Q ss_pred chhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccceee--e-
Q psy4132 324 DDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVL--Q- 400 (473)
Q Consensus 324 g~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl--~- 400 (473)
|.+.. .|+...+.. ... ...+.+++..+|+.+|.|++|.|+.+||...++.+ .
T Consensus 89 g~i~~---~Ef~~~~~~--------------------~~~-~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~ 144 (207)
T 2ehb_A 89 GVIEF---GEFVRSLGV--------------------FHP-SAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHES 144 (207)
T ss_dssp SEECH---HHHHHHHGG--------------------GST-TSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHH
T ss_pred CeEeH---HHHHHHHHH--------------------Hcc-CCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHc
Confidence 65555 344443332 211 11345668899999999999999999998877522 1
Q ss_pred ecccCcH---HHHHHHHHHHhh--CCCCCHHHHHHhhCC
Q psy4132 401 LKSCEDA---SFVEKTYEIVSQ--NVFVTVEQFSRLASV 434 (473)
Q Consensus 401 ~~~~~~~---~~~~~~~~~~~~--~~~ls~~e~a~~~~~ 434 (473)
....+++ ..+..+++.++. +|.||..||.+.+.-
T Consensus 145 g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 183 (207)
T 2ehb_A 145 ELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSL 183 (207)
T ss_dssp TCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 1122222 223334445543 578999999887643
No 200
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=98.98 E-value=1.7e-09 Score=100.90 Aligned_cols=120 Identities=18% Similarity=0.198 Sum_probs=86.8
Q ss_pred ccCC--CCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchhc-cC----CHHHHHHHHHh
Q psy4132 209 SNKD--RDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPEL-QQ----NPLVQRVIDIF 281 (473)
Q Consensus 209 ~D~d--~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~-~~----~~~~~~l~~~~ 281 (473)
+|.| ++|.|+.+||..++... .......+..+|+.+|.|++|.|+.+||..+... .. ...+..+|+.+
T Consensus 57 ~D~d~~~~G~I~~~El~~~l~~~-----~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~ 131 (226)
T 2zfd_A 57 ISSAVIDDGLINKEEFQLALFKT-----NKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLY 131 (226)
T ss_dssp HHTSSSCSSSBCHHHHHHHHHSC-----SSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHH
T ss_pred hCcccCCCCeEcHHHHHHHHhcc-----CcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHh
Confidence 4556 89999999999988631 1112235677999999999999999999985432 21 22478899999
Q ss_pred cCCCCCcccHHHHHHHHhhc---ccCCCcHH----HHHHHhHHhcCCCCchhhHhhHHH
Q psy4132 282 DEDRNGEVDFKEFIQGVSQF---SVKGDRES----KLKFAFRIYDIDNDDDYYQALGNE 333 (473)
Q Consensus 282 D~d~dG~I~~~EF~~~l~~~---~~~~~~~e----~l~~~F~~~D~d~dg~~~~~e~~e 333 (473)
|.|++|.|+++||..++... ......++ .+..+|+.+|.|++|.+..+||..
T Consensus 132 D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~ 190 (226)
T 2zfd_A 132 DLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRS 190 (226)
T ss_dssp CTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHH
T ss_pred CCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 99999999999999998632 12222333 346778899999997777643333
No 201
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=98.98 E-value=3.6e-10 Score=97.97 Aligned_cols=106 Identities=17% Similarity=0.158 Sum_probs=47.5
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHhhccc----CCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCcc
Q psy4132 274 VQRVIDIFDEDRNGEVDFKEFIQGVSQFSV----KGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTM 349 (473)
Q Consensus 274 ~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~----~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i 349 (473)
...+|..+|.|++|.|+++||+.++..... .....+.++.+|+.||.|++|.+.. .|+..++.......+
T Consensus 29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~---~El~~~l~~~~~~~~--- 102 (143)
T 3a4u_B 29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDG---LELSTAITHVHKEEG--- 102 (143)
T ss_dssp ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEH---HHHHHTCC----------
T ss_pred CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCH---HHHHHHHHHHHhhhc---
Confidence 356888889999999999999888776533 2345678999999999999976666 455544443211000
Q ss_pred chhHHHHHHHhhhCCCCCCHHHHHHH----HHHhccCCCCCeeHHhhhccc
Q psy4132 350 LLTDAYCRINRARGLELLSPEDLLNS----CLALDKLPDSPIYLKTYSSGV 396 (473)
Q Consensus 350 ~l~d~~~~~~~~~g~~~ls~~ei~~~----~~~~D~~~dg~Is~~EF~~~~ 396 (473)
...| ..++++++..+ |+.+|.|+||.|+++||...+
T Consensus 103 ----------~~~g-~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 103 ----------SEQA-PLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp -----------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred ----------cccC-CCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 0001 13677777554 599999999999999998654
No 202
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=98.97 E-value=3.1e-10 Score=98.32 Aligned_cols=91 Identities=13% Similarity=0.140 Sum_probs=47.5
Q ss_pred cccCCCCCceeHHHHHHHHccccccc-cchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc-----------CCHHH
Q psy4132 208 DSNKDRDGKINFQEFCSIVGNTDIHK-KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ-----------QNPLV 274 (473)
Q Consensus 208 ~~D~d~dG~I~f~EF~~~~~~~~~~~-~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~-----------~~~~~ 274 (473)
.+|.|++|.|+++||...+....... ......+.+..+|+.||.|++|+|+.+||..+.. ++ ....+
T Consensus 35 ~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~ 114 (143)
T 3a4u_B 35 SMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDEL 114 (143)
T ss_dssp ----------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CCHHHH
T ss_pred HhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHH
Confidence 47999999999999998876321110 1123457889999999999999999999998542 21 12233
Q ss_pred ----HHHHHHhcCCCCCcccHHHHHHHH
Q psy4132 275 ----QRVIDIFDEDRNGEVDFKEFIQGV 298 (473)
Q Consensus 275 ----~~l~~~~D~d~dG~I~~~EF~~~l 298 (473)
+.+|..+|.|++|.|+|+||+.++
T Consensus 115 ~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 115 INIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred HHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 455599999999999999998765
No 203
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=98.95 E-value=7.6e-10 Score=92.66 Aligned_cols=66 Identities=24% Similarity=0.414 Sum_probs=56.1
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcchh------cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE------LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~------~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.+...+.+..+|+.||.| +|+|+..||+.++. ++ ....++++++.+|.|+||.|+|+||+.+|..+
T Consensus 10 lE~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l 84 (121)
T 4drw_A 10 MEHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 84 (121)
T ss_dssp HHHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 455678999999999998 89999999999643 22 34468999999999999999999999998765
No 204
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=98.95 E-value=1.8e-10 Score=123.12 Aligned_cols=125 Identities=8% Similarity=0.191 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccch
Q psy4132 164 ETSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMV 236 (473)
Q Consensus 164 ~~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~ 236 (473)
..+..++++|+.+|+ ..++...|+.+|..++.. ++..++.. +|.|++|.|+|+||+.++....
T Consensus 8 ~~e~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~--el~~lf~~--~D~d~~G~I~f~EF~~~~~~l~------ 77 (624)
T 1djx_A 8 KLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDG--YARKIFRE--CDHSQTDSLEDEEIETFYKMLT------ 77 (624)
T ss_dssp ----------------------------------------------------------------CTTHHHHHHT------
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHH--HHHHHHHH--hCCCCCCeEeHHHHHHHHHHhc------
Confidence 345679999999998 678888899999888776 66666654 8999999999999999887321
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcchh-c-c----CCHHHHHHHHHhcCC----CCCcccHHHHHHHHhh
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-L-Q----QNPLVQRVIDIFDED----RNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~-~----~~~~~~~l~~~~D~d----~dG~I~~~EF~~~l~~ 300 (473)
..+++..+|+.||.+ +|+|+.+||+.++. . + ....++++++.+|.+ ++|.|+|+||+.+|..
T Consensus 78 -~~~el~~aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s 149 (624)
T 1djx_A 78 -QRAEIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS 149 (624)
T ss_dssp -CCHHHHHHHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHS
T ss_pred -cHHHHHHHHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcC
Confidence 125799999999986 99999999999643 2 2 234589999999998 7999999999999874
No 205
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=98.90 E-value=1.5e-09 Score=87.92 Aligned_cols=66 Identities=24% Similarity=0.405 Sum_probs=56.8
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
....+.++++++|+.||.|++|+|+.+||+.++ .++ ....++.+++.+|.|++|.|+|+||+.+|.
T Consensus 30 l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG 99 (100)
T ss_dssp CCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence 456788899999999999999999999999953 333 344689999999999999999999998763
No 206
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=98.88 E-value=3.1e-10 Score=92.83 Aligned_cols=97 Identities=18% Similarity=0.111 Sum_probs=72.7
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchh
Q psy4132 273 LVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLT 352 (473)
Q Consensus 273 ~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~ 352 (473)
.++.++..+| ++|.|+|+||+.++.. .....+.++.+|+.||.|++|.+...++..++..+..
T Consensus 10 e~~~l~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~------------ 72 (108)
T 2kyc_A 10 DIAAALRDCQ--APDSFSPKKFFQISGM---SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFES------------ 72 (108)
T ss_dssp HHHHHHTTSC--STTTCCHHHHHHHHTC---TTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSS------------
T ss_pred HHHHHHHHcC--CCCcCCHHHHHHHHhh---CcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhh------------
Confidence 4678888888 7999999999998853 2445678999999999999966665443333332210
Q ss_pred HHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccc
Q psy4132 353 DAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGV 396 (473)
Q Consensus 353 d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~ 396 (473)
.| ..++++++..+++.+|.|++|.|+++||...+
T Consensus 73 ---------~g-~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~ 106 (108)
T 2kyc_A 73 ---------GA-RVLTASETKTFLAAADHDGDGKIGAEEFQEMV 106 (108)
T ss_dssp ---------SC-CCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHH
T ss_pred ---------cc-CCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 02 13677889999999999999999999998654
No 207
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=98.84 E-value=2.7e-09 Score=93.12 Aligned_cols=83 Identities=10% Similarity=0.279 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHH
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLK 312 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~ 312 (473)
...+.++.+|+.||.|++|+|+.+||+.++ .++ ....++.++..+|.|++|.|+|+||+.++... .+.+.
T Consensus 47 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~------~~~i~ 120 (150)
T 2jjz_A 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK------RSAVL 120 (150)
T ss_dssp HHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS------SCCHH
T ss_pred HHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh------HHHHH
Confidence 467789999999999999999999999854 333 23458899999999999999999999998764 35699
Q ss_pred HHhHHhcCCCCch
Q psy4132 313 FAFRIYDIDNDDD 325 (473)
Q Consensus 313 ~~F~~~D~d~dg~ 325 (473)
.+|+.||.|++|.
T Consensus 121 ~aF~~~D~d~~G~ 133 (150)
T 2jjz_A 121 KLVMMFEGKANES 133 (150)
T ss_dssp HHHHC--------
T ss_pred HHHHHHcCCCCCC
Confidence 9999999999853
No 208
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=98.83 E-value=1.4e-09 Score=121.37 Aligned_cols=125 Identities=12% Similarity=0.216 Sum_probs=98.1
Q ss_pred HHHHHHHHHHhhhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHccccccccchH
Q psy4132 165 TSSNINNAFKDLNQ-------LMSMAKEMVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVGNTDIHKKMVV 237 (473)
Q Consensus 165 ~~~~l~eaF~~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~ 237 (473)
....++.+|..||+ ..++...|..+|..++.. +...++.. +|.|++|.|+|+||+.++.... ....
T Consensus 723 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~--~~~~~~~~--~D~d~dG~I~~~EF~~~~~~~~---~~~~ 795 (863)
T 1sjj_A 723 QMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEA--EFARIMSI--VDPNRMGVVTFQAFIDFMSRET---ADTD 795 (863)
T ss_dssp HHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTH--HHHHHHHH--HCTTSCSEEETTHHHHTHHHHS---TTCS
T ss_pred HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHH--HHHHHHHH--hCCCCCCcCcHHHHHHHHHHHh---cCCC
Confidence 45678999999987 688888899999888766 55555543 7899999999999998876321 1122
Q ss_pred HHHHHHHHHHhhCCCCCCCccHHHHhcchhccCCHHHHHHHHHhcCC-----CCCcccHHHHHHHHhh
Q psy4132 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDED-----RNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~~~~~~~l~~~~D~d-----~dG~I~~~EF~~~l~~ 300 (473)
..+.+..+|+.| .|++|+|+.+||+.++. ...++.++..+|.+ ++|.|+|+||+.+|..
T Consensus 796 ~~~~l~~aF~~~-~d~~G~Is~~El~~~l~---~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~ 859 (863)
T 1sjj_A 796 TADQVMASFKIL-AGDKNYITVDELRRELP---PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYG 859 (863)
T ss_dssp SSHHHHHHHHGG-GTSSSEEEHHHHHHHSC---HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSC
T ss_pred CHHHHHHHHHHH-hCCCCcCcHHHHHHHCC---HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhc
Confidence 345788999999 89999999999998753 45688899999886 6899999999988753
No 209
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=98.82 E-value=2.1e-10 Score=96.77 Aligned_cols=101 Identities=12% Similarity=0.202 Sum_probs=48.8
Q ss_pred HHHHhhhhhhhhhhhhcccccccccCCCCCceeHHHHHH-----HHccccccccchHHHHHHHHHHHhhCCCCCCCccHH
Q psy4132 186 MVEISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCS-----IVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSID 260 (473)
Q Consensus 186 l~~lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~-----~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~ 260 (473)
|+++|.+++.. ++..++.. + +|.|+|+||+. ++.... ........++++|+.|| |+|+.+
T Consensus 2 lr~lG~~~t~~--ei~~~~~~--~----~g~i~f~EF~~~~~~~~~~~~~---~~~~~~~~l~~aF~~fD----G~I~~~ 66 (123)
T 2kld_A 2 STAIGINDTYS--EVKSDLAQ--Q----KAEMELSDLIRKGYHKALVKLK---LKKNTVDDISESLRQGG----GKLNFD 66 (123)
T ss_dssp ------------------------------------------------------------CCSCSSTTTT----TCEEHH
T ss_pred hhhcCCCCCHH--HHHHHHHH--c----CCCccHHHHHhHhHHHHHHHhh---cChhHHHHHHHHHHHhC----CCCCHH
Confidence 68899999888 77776653 2 78999999999 665221 12344567889999999 999999
Q ss_pred HHhcch-hccC-CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 261 EFMSLP-ELQQ-NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 261 el~~l~-~~~~-~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
||+.++ .++. ...++.+++.+|.|++|.|+|+||+.++...
T Consensus 67 El~~~l~~lG~t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~ 109 (123)
T 2kld_A 67 ELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDL 109 (123)
T ss_dssp HHHHHTTTCCSSHHHHHHHHHHHSSSSCCEECSHHHHHCSCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 999953 3443 3458999999999999999999999988655
No 210
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.79 E-value=2e-08 Score=110.25 Aligned_cols=139 Identities=10% Similarity=0.141 Sum_probs=102.7
Q ss_pred HHHHHHHHHh--hCCCCCCCccHHHHhcchhccCCHHHHHHHHHhcCC-------CCCcccHHHHHHHHhhcccCCCcHH
Q psy4132 239 IRRLGKRFRK--LDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDED-------RNGEVDFKEFIQGVSQFSVKGDRES 309 (473)
Q Consensus 239 ~~~l~~~F~~--~D~d~~G~Is~~el~~l~~~~~~~~~~~l~~~~D~d-------~dG~I~~~EF~~~l~~~~~~~~~~e 309 (473)
...++++|.. +|+|++|.|+.+++.+++... ...++.+++.+|.+ ++|.|+|+||..++..+.. .+
T Consensus 149 ~~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~~-~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~----R~ 223 (885)
T 3ohm_B 149 NTFLRKAYTKLKLQVNQDGRIPVKNILKMFSAD-KKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL----RP 223 (885)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEHHHHHHTTGGG-HHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC----CH
T ss_pred HHHHHHHHHHhcCccCCCCccCHHHHHHHHhcC-HHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC----HH
Confidence 3467788887 899999999999999976653 34678899999987 7899999999999987642 46
Q ss_pred HHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccC----CCC
Q psy4132 310 KLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKL----PDS 385 (473)
Q Consensus 310 ~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~----~dg 385 (473)
.++.+|+.||.+++|.++. ++|..+|...-.+. .+.++ . ...++.+++.++++.++.+ ++|
T Consensus 224 EI~eiF~~ydsd~~g~mT~---~EL~~FL~~~Q~e~----~~~e~-------~-~~~~t~e~~~~iI~k~e~~~~~~~~g 288 (885)
T 3ohm_B 224 DIDKILLEIGAKGKPYLTL---EQLMDFINQKQRDP----RLNEV-------L-YPPLRPSQARLLIEKYEPNQQFLERD 288 (885)
T ss_dssp HHHHHHHHTTCCSTTCEEH---HHHHHHHHHHSSCT----TSCTT-------T-SCCCCHHHHHHHHHHHCCCHHHHHTT
T ss_pred HHHHHHHHHhcCCCCccCH---HHHHHHHHHhcCcc----ccccc-------c-cccCCHHHHHHHHHHhcCChhhhccC
Confidence 7999999999888755555 34444444321110 00000 0 0027889999999999998 789
Q ss_pred CeeHHhhhccce
Q psy4132 386 PIYLKTYSSGVK 397 (473)
Q Consensus 386 ~Is~~EF~~~~~ 397 (473)
.|++++|...+.
T Consensus 289 ~LsldgF~~yL~ 300 (885)
T 3ohm_B 289 QMSMEGFSRYLG 300 (885)
T ss_dssp EECHHHHHHHHT
T ss_pred ccchhhhhhhcc
Confidence 999999987765
No 211
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=98.79 E-value=3.8e-09 Score=91.85 Aligned_cols=83 Identities=13% Similarity=0.292 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHH
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLK 312 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~ 312 (473)
.....++.+|+.||.|++|+|+.+||+.++ .++. ...++.++..+|.|++|.|+|+||+.++... .+.+.
T Consensus 45 ~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~------~~~~~ 118 (147)
T 1wy9_A 45 SKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK------RSAIL 118 (147)
T ss_dssp HHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS------GGGGG
T ss_pred HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh------HHHHH
Confidence 567789999999999999999999999853 3332 3358899999999999999999999998654 56788
Q ss_pred HHhHHhcCCCCch
Q psy4132 313 FAFRIYDIDNDDD 325 (473)
Q Consensus 313 ~~F~~~D~d~dg~ 325 (473)
.+|+.||.|++|.
T Consensus 119 ~aF~~~D~d~~g~ 131 (147)
T 1wy9_A 119 RMILMYEEKNKEH 131 (147)
T ss_dssp GGGGGCCCC----
T ss_pred HHHHHHccCCCCC
Confidence 9999999999854
No 212
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=98.78 E-value=1.9e-08 Score=79.56 Aligned_cols=82 Identities=24% Similarity=0.362 Sum_probs=64.8
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcccCCC--cH
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGD--RE 308 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~--~~ 308 (473)
.....+.++.+|+.+|.+++|+|+..||+.++ .++ ....+..++..+|.+++|.|+|+||+.++........ ..
T Consensus 4 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~ 83 (92)
T 2kn2_A 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNGW 83 (92)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCCHHH
T ss_pred CccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCCchH
Confidence 34567889999999999999999999999953 333 2345889999999999999999999999987754432 23
Q ss_pred HHHHHHhH
Q psy4132 309 SKLKFAFR 316 (473)
Q Consensus 309 e~l~~~F~ 316 (473)
+.++.+|+
T Consensus 84 ~~l~~aF~ 91 (92)
T 2kn2_A 84 SRLRRKFS 91 (92)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 55666664
No 213
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=98.73 E-value=1.3e-09 Score=85.34 Aligned_cols=81 Identities=25% Similarity=0.435 Sum_probs=62.8
Q ss_pred CCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCC
Q psy4132 212 DRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNG 287 (473)
Q Consensus 212 d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG 287 (473)
|++|.|+|+|+ ++.. .........++.+|+.+|.+++|+|+..||+.+. .++ ....++.++..+|.+++|
T Consensus 1 ~~~G~i~~~e~--~~~~----~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g 74 (87)
T 1s6j_A 1 HSSGHIDDDDK--HMAE----RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSG 74 (87)
T ss_dssp CCSSSSSSHHH--HSSS----SSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSS
T ss_pred CCCCccCccHH--HHHH----HCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCC
Confidence 56899999993 3331 1223345679999999999999999999999853 333 233588999999999999
Q ss_pred cccHHHHHHHH
Q psy4132 288 EVDFKEFIQGV 298 (473)
Q Consensus 288 ~I~~~EF~~~l 298 (473)
.|+|+||+.++
T Consensus 75 ~i~~~eF~~~~ 85 (87)
T 1s6j_A 75 TIDYGEFIAAT 85 (87)
T ss_dssp EECHHHHTTCC
T ss_pred cCcHHHHHHHH
Confidence 99999998643
No 214
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=98.72 E-value=1.6e-08 Score=81.51 Aligned_cols=67 Identities=21% Similarity=0.329 Sum_probs=56.2
Q ss_pred chHHHHHHHHHHHhhC-CCCCC-CccHHHHhcchh--c----c---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLD-LDNSG-ALSIDEFMSLPE--L----Q---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D-~d~~G-~Is~~el~~l~~--~----~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.+.....++++|+.|| +|++| +|+.+||+.++. + + ....++++++.+|.|+||.|+|+||+.++...
T Consensus 6 le~~i~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 83 (98)
T 3n22_A 6 LEQALAVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLALI 83 (98)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 4567889999999997 88985 999999999643 2 2 23468999999999999999999999988654
No 215
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=98.71 E-value=1.1e-08 Score=82.77 Aligned_cols=67 Identities=16% Similarity=0.294 Sum_probs=56.2
Q ss_pred chHHHHHHHHHHHhhC-CCCC-CCccHHHHhcchh--c----cC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLD-LDNS-GALSIDEFMSLPE--L----QQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D-~d~~-G~Is~~el~~l~~--~----~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.+.....++++|+.|| +|++ |+|+.+||+.++. + +. ...++++++.+|.|+||.|+|+||+.++..+
T Consensus 5 le~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 5 LEQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3556789999999997 8887 9999999999653 2 22 3358999999999999999999999988654
No 216
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=98.70 E-value=1.8e-08 Score=80.35 Aligned_cols=67 Identities=22% Similarity=0.338 Sum_probs=55.9
Q ss_pred chHHHHHHHHHHHhhC-CCCC-CCccHHHHhcchh--cc-------CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLD-LDNS-GALSIDEFMSLPE--LQ-------QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D-~d~~-G~Is~~el~~l~~--~~-------~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.+...+.++++|+.|| +|++ |+|+.+||+.++. ++ ....++++++.+|.|+||.|+|+||+.++..+
T Consensus 5 le~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 5 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 4567789999999998 6874 8999999999643 32 23468999999999999999999999998754
No 217
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=98.69 E-value=1.9e-08 Score=81.96 Aligned_cols=68 Identities=22% Similarity=0.343 Sum_probs=56.5
Q ss_pred cchHHHHHHHHHHHhhC-CCCC-CCccHHHHhcchh--cc-------CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 234 KMVVDIRRLGKRFRKLD-LDNS-GALSIDEFMSLPE--LQ-------QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D-~d~~-G~Is~~el~~l~~--~~-------~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
..+.....++++|+.|| .|++ |+|+.+||+.++. ++ ....++++++.+|.|+||.|+|+||+.+|...
T Consensus 7 ~le~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~ 85 (104)
T 3zwh_A 7 PLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI 85 (104)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 34567789999999997 7775 8999999999653 32 23468999999999999999999999998755
No 218
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=98.69 E-value=2.8e-08 Score=82.12 Aligned_cols=67 Identities=22% Similarity=0.354 Sum_probs=56.6
Q ss_pred chHHHHHHHHHHHhhC-CCCCC-CccHHHHhcchh------cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLD-LDNSG-ALSIDEFMSLPE------LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D-~d~~G-~Is~~el~~l~~------~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.....+.++++|+.|| .|++| +|+.+||+.++. ++ ....++.+++.+|.|+||.|+|+||+.+|...
T Consensus 17 ~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 17 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 3556789999999999 89997 999999999653 22 34468999999999999999999999988654
No 219
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=98.67 E-value=6.9e-08 Score=91.22 Aligned_cols=85 Identities=14% Similarity=0.171 Sum_probs=65.8
Q ss_pred cccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh--------ccC---------
Q psy4132 208 DSNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE--------LQQ--------- 270 (473)
Q Consensus 208 ~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~--------~~~--------- 270 (473)
.+|.|++|.|+|.||+..+.- .......++++.+|+.+| |++|+|+.+|+..+.. ++.
T Consensus 140 ~FD~~~~G~I~f~ef~~aLs~----l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~ 214 (261)
T 1eg3_A 140 VYDTGRTGRIRVLSFKTGIIS----LCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNI 214 (261)
T ss_dssp HHCTTCCSEEEHHHHHHHHHH----TSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCC
T ss_pred HccCCCCceEeHHHHHHHHHH----HcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCH
Confidence 479999999999999988772 123445679999999999 9999999999888421 111
Q ss_pred CHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 271 NPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 271 ~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
.+.++.+|+.+| ++|.|+.+||+..+.
T Consensus 215 e~~v~~~F~~~d--~dg~It~~EFl~~~~ 241 (261)
T 1eg3_A 215 EPSVRSCFQFAN--NKPEIEAALFLDWMR 241 (261)
T ss_dssp HHHHHHHHHHTT--TCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHhCC--CCCcCCHHHHHHHHH
Confidence 123788888885 789999999998875
No 220
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=98.66 E-value=2.2e-08 Score=78.16 Aligned_cols=85 Identities=19% Similarity=0.213 Sum_probs=59.3
Q ss_pred CCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhC
Q psy4132 284 DRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARG 363 (473)
Q Consensus 284 d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g 363 (473)
|++|.|+|+|+ .+... ......+.++.+|+.||.|++|.+.. .++..++.. . |
T Consensus 1 ~~~G~i~~~e~--~~~~~-l~~~~~~~~~~~F~~~D~d~~G~i~~---~el~~~l~~--------------------~-~ 53 (87)
T 1s6j_A 1 HSSGHIDDDDK--HMAER-LSEEEIGGLKELFKMIDTDNSGTITF---DELKDGLKR--------------------V-G 53 (87)
T ss_dssp CCSSSSSSHHH--HSSSS-SCSSSTTTTTTHHHHHCTTCSSCEEH---HHHHHHHHT--------------------T-T
T ss_pred CCCCccCccHH--HHHHH-CCHHHHHHHHHHHHHHCCCCCCcCcH---HHHHHHHHH--------------------h-C
Confidence 56888999983 22222 12223456888999999998855555 333333332 1 1
Q ss_pred CCCCCHHHHHHHHHHhccCCCCCeeHHhhhccc
Q psy4132 364 LELLSPEDLLNSCLALDKLPDSPIYLKTYSSGV 396 (473)
Q Consensus 364 ~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~ 396 (473)
..++++++..+++.+|.+++|.|+++||+..+
T Consensus 54 -~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~ 85 (87)
T 1s6j_A 54 -SELMESEIKDLMDAADIDKSGTIDYGEFIAAT 85 (87)
T ss_dssp -SSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred -CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 14788999999999999999999999998765
No 221
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=98.66 E-value=5.5e-08 Score=75.76 Aligned_cols=67 Identities=24% Similarity=0.339 Sum_probs=57.1
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc--CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ--QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~--~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
...+.+.++.+|+.+|.|++|+|+.+||..+. .++ ....++.++..+|.|++|.|+|+||+.++...
T Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 6 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred CHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 45678899999999999999999999999853 333 22358899999999999999999999998765
No 222
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.64 E-value=4e-08 Score=78.14 Aligned_cols=67 Identities=12% Similarity=0.156 Sum_probs=56.5
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC-CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ-NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~-~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
...+..+++++|+.||+|++|+|+.+|++.++ ..+. ...+..++..+|.|++|.|+|+||+.+|...
T Consensus 4 s~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 4 TDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp CHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 34567889999999999999999999999964 3332 3458899999999999999999999988654
No 223
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.64 E-value=8.2e-09 Score=113.04 Aligned_cols=123 Identities=7% Similarity=0.096 Sum_probs=77.3
Q ss_pred HHHHHHHHHH--hhhh-------hhhHHHHHHHHhhhhhhhhhhhhccccc-----ccccCCCCCceeHHHHHHHHcccc
Q psy4132 165 TSSNINNAFK--DLNQ-------LMSMAKEMVEISKNISNKIINRQGEITE-----DDSNKDRDGKINFQEFCSIVGNTD 230 (473)
Q Consensus 165 ~~~~l~eaF~--~lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~-----~~~D~d~dG~I~f~EF~~~~~~~~ 230 (473)
....++++|. .||+ ..++...|++. .. ++..++.. ...|.+++|.|+|+||+.++....
T Consensus 144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~~-----~~--ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~ 216 (799)
T 2zkm_X 144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPAD-----RK--RVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC 216 (799)
T ss_dssp HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCSC-----HH--HHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS
T ss_pred HHHHHHHHhHHhccCCCCCCeECHHHHHHHHhhh-----HH--HHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc
Confidence 4567999999 7887 34444444331 11 33333322 123568899999999999987321
Q ss_pred ccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-c-cC------------CHHHHHHHHHhcCC----CCCcccHH
Q psy4132 231 IHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-L-QQ------------NPLVQRVIDIFDED----RNGEVDFK 292 (473)
Q Consensus 231 ~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~-~~------------~~~~~~l~~~~D~d----~dG~I~~~ 292 (473)
..++++++|+.||.+++|+|+.+||+.++. . +. ...+++|++.+|.| ++|.|+|+
T Consensus 217 -------~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~e 289 (799)
T 2zkm_X 217 -------PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPE 289 (799)
T ss_dssp -------CCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHH
T ss_pred -------CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchh
Confidence 236789999999999999999999999643 2 22 23478999999998 89999999
Q ss_pred HHHHHHhhc
Q psy4132 293 EFIQGVSQF 301 (473)
Q Consensus 293 EF~~~l~~~ 301 (473)
+|+.+|...
T Consensus 290 eF~~~L~S~ 298 (799)
T 2zkm_X 290 GMVWFLCGP 298 (799)
T ss_dssp HHHHHHHST
T ss_pred hhhhcccCc
Confidence 999999643
No 224
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=98.63 E-value=3.8e-08 Score=81.50 Aligned_cols=84 Identities=17% Similarity=0.308 Sum_probs=59.2
Q ss_pred chHHHHHHHHHHHhhCC-CCCC-CccHHHHhcchh--cc--------CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhcc
Q psy4132 235 MVVDIRRLGKRFRKLDL-DNSG-ALSIDEFMSLPE--LQ--------QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFS 302 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~-d~~G-~Is~~el~~l~~--~~--------~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~ 302 (473)
.......++.+|+.||. |++| +|+.+||+.++. ++ ....++.++..+|.|++|.|+|+||+.++....
T Consensus 7 l~~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~ 86 (113)
T 1xk4_C 7 LERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT 86 (113)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH
Confidence 34567889999999995 9999 999999999643 33 123588999999999999999999999997652
Q ss_pred cCCCcHHHHHHHhHHhcCCCCch
Q psy4132 303 VKGDRESKLKFAFRIYDIDNDDD 325 (473)
Q Consensus 303 ~~~~~~e~l~~~F~~~D~d~dg~ 325 (473)
......|...| +++|.
T Consensus 87 ------~~~~~~f~~~~-~~~g~ 102 (113)
T 1xk4_C 87 ------WASHEKMHEGD-EGPGH 102 (113)
T ss_dssp ------HHHHC------------
T ss_pred ------HHHHHHHhhCC-CCCcc
Confidence 34566677777 77753
No 225
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=98.63 E-value=4.4e-08 Score=79.25 Aligned_cols=67 Identities=15% Similarity=0.261 Sum_probs=55.8
Q ss_pred chHHHHHHHHHHHhhCCCC---CCCccHHHHhcchhc-c----C----CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDN---SGALSIDEFMSLPEL-Q----Q----NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~---~G~Is~~el~~l~~~-~----~----~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.....+.++++|+.||.++ +|+|+.+||+.++.. + . ...++.+++.+|.|+||.|+|+||+.+|..+
T Consensus 6 le~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 6 LEKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp HHHHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 4567789999999999964 799999999996432 1 1 2358999999999999999999999999765
No 226
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=98.61 E-value=4.8e-08 Score=78.18 Aligned_cols=67 Identities=22% Similarity=0.353 Sum_probs=54.7
Q ss_pred chHHHHHHHHHHHhhC-CCC-CCCccHHHHhcchhc------c---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLD-LDN-SGALSIDEFMSLPEL------Q---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D-~d~-~G~Is~~el~~l~~~------~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
...+...++.+|+.|| .|+ +|+|+.+||+.++.. + ....++.+++.+|.|++|.|+|+||+.++...
T Consensus 4 l~~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (95)
T 1j55_A 4 LETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (95)
T ss_dssp HHHHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 3456789999999999 788 589999999996432 2 23358999999999999999999999988654
No 227
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.60 E-value=4.2e-08 Score=78.51 Aligned_cols=67 Identities=16% Similarity=0.184 Sum_probs=56.5
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC-CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ-NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~-~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
...+.+.++++|+.||+|++|+|+.+|++.++ ..+. ...++.+++.+|.|++|.|+|+||+.+|...
T Consensus 5 s~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 73 (95)
T 1c07_A 5 SPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLI 73 (95)
T ss_dssp CSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 34677899999999999999999999999964 3332 3358899999999999999999999988654
No 228
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=98.59 E-value=6.5e-08 Score=73.53 Aligned_cols=66 Identities=17% Similarity=0.394 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccCC---HHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQN---PLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~~---~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
..+...++.+|+.+|.+++|+|+.+||..+. .++.. ..++.++..+|.+++|.|+|+||+.++...
T Consensus 3 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~ 72 (77)
T 2joj_A 3 EEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEK 72 (77)
T ss_dssp HHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 4567889999999999999999999999953 33332 347899999999999999999999988654
No 229
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=98.58 E-value=9.3e-08 Score=74.20 Aligned_cols=69 Identities=17% Similarity=0.368 Sum_probs=58.0
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhcc
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFS 302 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~ 302 (473)
........++.+|+.+|.+++|+|+.+||+.+. .++. ...++.++..+|.+++|.|+|+||+.++....
T Consensus 8 l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 80 (85)
T 2ktg_A 8 LTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLEYG 80 (85)
T ss_dssp SSHHHHHHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence 345678899999999999999999999999953 3332 23588999999999999999999999987653
No 230
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=98.57 E-value=5.8e-08 Score=77.15 Aligned_cols=67 Identities=19% Similarity=0.337 Sum_probs=56.5
Q ss_pred chHHHHHHHHHHHhhC-CCCCC-CccHHHHhcchhc------cCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLD-LDNSG-ALSIDEFMSLPEL------QQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D-~d~~G-~Is~~el~~l~~~------~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.......++.+|+.|| +|++| +|+.+||+.++.. .....++.+++.+|.|++|.|+|+||+.++...
T Consensus 5 l~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~ 79 (92)
T 2kax_A 5 LEKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTML 79 (92)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3456788999999999 99999 9999999996431 223468999999999999999999999988654
No 231
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=98.57 E-value=6.5e-08 Score=78.09 Aligned_cols=67 Identities=25% Similarity=0.404 Sum_probs=55.8
Q ss_pred chHHHHHHHHHHHhhC-CCCCC-CccHHHHhcchh------cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLD-LDNSG-ALSIDEFMSLPE------LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D-~d~~G-~Is~~el~~l~~------~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.......++.+|+.|| .|++| +|+.+||+.++. ++ ....++.++..+|.|++|.|+|+||+.++...
T Consensus 5 l~~~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 5 LEGAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 3456788999999997 89998 999999999643 22 23358999999999999999999999988654
No 232
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=98.56 E-value=4.3e-08 Score=78.48 Aligned_cols=67 Identities=19% Similarity=0.335 Sum_probs=55.8
Q ss_pred chHHHHHHHHHHHhhC-CCCCC-CccHHHHhcchh------cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLD-LDNSG-ALSIDEFMSLPE------LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D-~d~~G-~Is~~el~~l~~------~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.......++++|+.|| +|++| +|+.+||+.++. ++ ....++.+++.+|.|++|.|+|+||+.++...
T Consensus 7 ~e~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~ 84 (95)
T 2wcb_A 7 LEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 84 (95)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 3456788999999999 89998 999999999643 22 23458999999999999999999999988643
No 233
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=98.56 E-value=6.6e-08 Score=79.05 Aligned_cols=67 Identities=18% Similarity=0.354 Sum_probs=56.1
Q ss_pred chHHHHHHHHHHHhhC-CCCC-CCccHHHHhcchh--ccC----CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLD-LDNS-GALSIDEFMSLPE--LQQ----NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D-~d~~-G~Is~~el~~l~~--~~~----~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.....+.++++|+.|| .|++ |+|+.+||+.++. ++. ...++.++..+|.|++|.|+|+||+.++...
T Consensus 17 le~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 17 LEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 4556789999999999 7986 7999999999753 331 2468999999999999999999999988654
No 234
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.55 E-value=5.2e-08 Score=80.24 Aligned_cols=66 Identities=18% Similarity=0.207 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc-CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ-QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~-~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
..+.++++++|+.||+|++|+|+.+|++.++ ..+ ....++.+++.+|.|++|.|+|+||+.+|...
T Consensus 18 ~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~ 85 (110)
T 1iq3_A 18 EEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp SSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 4567889999999999999999999999953 332 23468999999999999999999999988654
No 235
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.54 E-value=5.4e-08 Score=78.57 Aligned_cols=65 Identities=15% Similarity=0.256 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC-CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ-NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~-~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.+.+.++++|+.||+|++|+|+.+|++.++ ..+. ...+..+++.+|.|++|.|+|+||+.+|...
T Consensus 8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~ 74 (99)
T 1qjt_A 8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRLV 74 (99)
T ss_dssp TTCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 345679999999999999999999999964 3332 3458999999999999999999999998654
No 236
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=98.53 E-value=1e-07 Score=75.69 Aligned_cols=66 Identities=26% Similarity=0.472 Sum_probs=54.5
Q ss_pred chHHHHHHHHHHHhhCCCCCC---CccHHHHhcchh------ccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSG---ALSIDEFMSLPE------LQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G---~Is~~el~~l~~------~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.+.....++++|+.|| +++| +|+.+||+.++. ++. ...++.+++.+|.|++|.|+|+||+.++..+
T Consensus 4 le~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 4 LEKAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 3456788999999999 6666 999999999643 332 2358999999999999999999999998765
No 237
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=98.53 E-value=1.3e-07 Score=74.73 Aligned_cols=67 Identities=31% Similarity=0.460 Sum_probs=56.3
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC-CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ-NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~-~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.......++.+|+.+|.|++|+|+.+||..++ .++. ...++.++..+|.|++|.|+|+||+.++..+
T Consensus 22 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~~ 90 (91)
T 2pmy_A 22 DGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGFLGS 90 (91)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCcCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence 35667889999999999999999999999853 3332 3358899999999999999999999988643
No 238
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=98.52 E-value=1.7e-07 Score=76.58 Aligned_cols=66 Identities=23% Similarity=0.242 Sum_probs=55.9
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC-CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ-NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~-~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
...+..+++++|+.||+ ++|+|+.+|++.++ ..+. ...+..++..+|.|++|.|+|+||+.+|...
T Consensus 10 s~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~ 77 (106)
T 1eh2_A 10 KPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 77 (106)
T ss_dssp CHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 35677889999999999 99999999999964 3332 3358899999999999999999999988654
No 239
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=98.50 E-value=1.3e-07 Score=77.97 Aligned_cols=67 Identities=16% Similarity=0.197 Sum_probs=56.3
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc-CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ-QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~-~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
...+.+.++.+|+.||.|++|+|+.+||+.++. .. ....+..++..+|.|++|.|+|+||+.++...
T Consensus 9 s~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~ 77 (111)
T 2kgr_A 9 PQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLI 77 (111)
T ss_dssp CHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 355778899999999999999999999999654 11 23358899999999999999999999988654
No 240
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=98.50 E-value=9.2e-08 Score=70.39 Aligned_cols=60 Identities=27% Similarity=0.493 Sum_probs=50.6
Q ss_pred HHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 241 RLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 241 ~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
.++.+|+.+|.+++|+|+.+||..+. .++ ....+..++..+|.|++|.|+|+||+.++..
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 47889999999999999999999853 333 2235789999999999999999999998864
No 241
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=98.49 E-value=2e-07 Score=73.27 Aligned_cols=67 Identities=27% Similarity=0.398 Sum_probs=56.8
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.......++.+|+.+|.+++|+|+.+||..+. .++. ...++.++..+|.+++|.|+|+||+.++...
T Consensus 15 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~ 85 (90)
T 1avs_A 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85 (90)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 45677889999999999999999999999953 3332 2358899999999999999999999988654
No 242
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=98.47 E-value=1.4e-07 Score=76.27 Aligned_cols=66 Identities=14% Similarity=0.254 Sum_probs=54.9
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcchhc-----------cCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPEL-----------QQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~-----------~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
...+.+.++++|+.||.+ +|+|+.+||+.++.. .....++.+++.+|.|++|.|+|+||+.++...
T Consensus 5 l~~~~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (100)
T 1psr_A 5 AERSIIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp HHHHHHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 345678999999999976 799999999996431 223468899999999999999999999998653
No 243
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=98.47 E-value=2e-07 Score=75.32 Aligned_cols=64 Identities=16% Similarity=0.202 Sum_probs=48.7
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
.+.++.+|+.||+|++|.++..|+..++..+ |. .++++++.++++.+|.|+||.|
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~l------------------------g~-~~~~~ei~~l~~~~D~d~dG~I 89 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSL------------------------GY-MPNEVELEVIIQRLDMDGDGQV 89 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHH------------------------TC-CCCTTTHHHHHHHHCSSCSSSB
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh------------------------CC-CCCHHHHHHHHHHHCCCCCCeE
Confidence 4578999999999999666664333333222 21 4788889999999999999999
Q ss_pred eHHhhhccc
Q psy4132 388 YLKTYSSGV 396 (473)
Q Consensus 388 s~~EF~~~~ 396 (473)
+|+||+..+
T Consensus 90 ~~~EF~~~m 98 (100)
T 2lv7_A 90 DFEEFVTLL 98 (100)
T ss_dssp CHHHHHHHT
T ss_pred eHHHHHHHh
Confidence 999998643
No 244
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=98.46 E-value=3.7e-07 Score=72.66 Aligned_cols=78 Identities=21% Similarity=0.189 Sum_probs=57.4
Q ss_pred HHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHH
Q psy4132 294 FIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLL 373 (473)
Q Consensus 294 F~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~ 373 (473)
|+.++..........+.++.+|+.||.|++|.+... ++..++. .. | ..++++++.
T Consensus 14 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~---El~~~l~--------------------~~-g-~~~~~~e~~ 68 (94)
T 2kz2_A 14 ENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAA---ELRHVMT--------------------NL-G-EKLTDEEVD 68 (94)
T ss_dssp CTHHHHHHHCCCSCHHHHHHHHHHHCTTCCSCBCHH---HHHHHHH--------------------HH-T-CCCCHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHCCCCcCcCCHH---HHHHHHH--------------------Hh-C-CCCCHHHHH
Confidence 444455555566778899999999999999655553 3333332 22 2 147889999
Q ss_pred HHHHHhccCCCCCeeHHhhhccc
Q psy4132 374 NSCLALDKLPDSPIYLKTYSSGV 396 (473)
Q Consensus 374 ~~~~~~D~~~dg~Is~~EF~~~~ 396 (473)
.+++.+|.|++|.|+++||...+
T Consensus 69 ~l~~~~D~d~dG~I~~~EF~~~~ 91 (94)
T 2kz2_A 69 EMIREADIDGDGQVNYEEFVQMM 91 (94)
T ss_dssp HHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHhCCCCCCcEeHHHHHHHH
Confidence 99999999999999999998654
No 245
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=98.45 E-value=9.3e-08 Score=71.31 Aligned_cols=62 Identities=26% Similarity=0.465 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
..+.++.+|+.+|.+++|+|+.+||..+. .++ ....++.++..+|.+++|.|+|+||+.++.
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 46789999999999999999999999854 333 233578999999999999999999998874
No 246
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=98.44 E-value=3.2e-07 Score=73.04 Aligned_cols=64 Identities=27% Similarity=0.403 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVS 299 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 299 (473)
....+.++.+|+.+|.|++|+|+.+||+.++ .++ ....++.+++.+|.|++|.|+|+||+.++.
T Consensus 25 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 25 TDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp CSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 3456789999999999999999999999953 333 234588999999999999999999998875
No 247
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=98.44 E-value=1e-07 Score=70.03 Aligned_cols=59 Identities=27% Similarity=0.467 Sum_probs=48.8
Q ss_pred HHHHHHhhCCCCCCCccHHHHhcchh-cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 242 LGKRFRKLDLDNSGALSIDEFMSLPE-LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 242 l~~~F~~~D~d~~G~Is~~el~~l~~-~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
++.+|+.+|.|++|+|+.+||..+.. .+ ....++.++..+|.|++|.|+|+||+.++..
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 35789999999999999999998533 22 2234788999999999999999999998864
No 248
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=98.43 E-value=3.1e-07 Score=72.85 Aligned_cols=66 Identities=18% Similarity=0.236 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHhhCC-CCCC-CccHHHHhcch-h-cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 236 VVDIRRLGKRFRKLDL-DNSG-ALSIDEFMSLP-E-LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~-d~~G-~Is~~el~~l~-~-~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
......++.+|+.||. |++| +|+..||+.++ . ++ ....++.+++.+|.|++|.|+|+||+.++...
T Consensus 6 ~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 78 (93)
T 1xk4_A 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 4566789999999999 9999 99999999865 2 32 12347899999999999999999999988654
No 249
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=98.43 E-value=2.6e-07 Score=69.83 Aligned_cols=64 Identities=19% Similarity=0.349 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhh-CCCCC-CCccHHHHhcch-hcc-----CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 238 DIRRLGKRFRKL-DLDNS-GALSIDEFMSLP-ELQ-----QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 238 ~~~~l~~~F~~~-D~d~~-G~Is~~el~~l~-~~~-----~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
..+.++.+|+.+ |.+++ |+|+..||..+. ..+ ....++.++..+|.+++|.|+|+||+.++...
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 74 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 356789999999 99999 999999999853 222 33468999999999999999999999988654
No 250
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=98.43 E-value=4.3e-07 Score=69.18 Aligned_cols=62 Identities=27% Similarity=0.470 Sum_probs=52.6
Q ss_pred HHHHHHHHhhCCCCCCCccHHHHhcch-hcc--CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 240 RRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ--QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 240 ~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~--~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
++++.+|+.+|.+++|+|+.+||..+. .++ ....++.++..+|.|++|.|+|+||+.++...
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 468899999999999999999999853 333 23358899999999999999999999988754
No 251
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=98.43 E-value=2.8e-07 Score=74.63 Aligned_cols=80 Identities=11% Similarity=0.244 Sum_probs=62.4
Q ss_pred eeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHH
Q psy4132 217 INFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFK 292 (473)
Q Consensus 217 I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~ 292 (473)
++++++...+.. ........++.+|+.||.+++|+|+..||+.++ .++ ....++.++..+|.|++|.|+|+
T Consensus 6 ~~~~~~~~~l~~-----~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~ 80 (105)
T 1wlz_A 6 TADRDILARLHK-----AVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYP 80 (105)
T ss_dssp TCCHHHHHHHHH-----HHHHTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHH
T ss_pred hhHHHHHHHHHH-----HHHchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHH
Confidence 556777776652 223456789999999999999999999999953 333 23358899999999999999999
Q ss_pred HHHHHHhhc
Q psy4132 293 EFIQGVSQF 301 (473)
Q Consensus 293 EF~~~l~~~ 301 (473)
||+.++...
T Consensus 81 eF~~~~~~~ 89 (105)
T 1wlz_A 81 DFLSRFSSE 89 (105)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHhcc
Confidence 999988654
No 252
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=98.42 E-value=3.2e-07 Score=71.35 Aligned_cols=66 Identities=14% Similarity=0.087 Sum_probs=55.6
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC---CHH---HHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ---NPL---VQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~---~~~---~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
...+...++.+|+.||.+++|+|+..||..++ .++. ... +..++..+|.+++|.|+| ||+.++...
T Consensus 9 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~~ 81 (86)
T 1j7q_A 9 GPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSKW 81 (86)
T ss_dssp SSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHHH
Confidence 45678889999999999999999999999853 3332 335 788999999999999999 999988754
No 253
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=98.42 E-value=1.1e-07 Score=72.40 Aligned_cols=65 Identities=23% Similarity=0.336 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHhhCC-CCCC-CccHHHHhcchh--cc----CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 237 VDIRRLGKRFRKLDL-DNSG-ALSIDEFMSLPE--LQ----QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~-d~~G-~Is~~el~~l~~--~~----~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.....++.+|+.+|. +++| +|+..||+.+.. ++ ....++.++..+|.|++|.|+|+||+.++..+
T Consensus 4 ~~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 76 (78)
T 1cb1_A 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHh
Confidence 356789999999999 9999 999999999643 33 34458899999999999999999999988654
No 254
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=98.41 E-value=2.3e-07 Score=73.27 Aligned_cols=66 Identities=27% Similarity=0.423 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHhhC-CCCCC-CccHHHHhcchh------ccC---CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 236 VVDIRRLGKRFRKLD-LDNSG-ALSIDEFMSLPE------LQQ---NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D-~d~~G-~Is~~el~~l~~------~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
......++.+|+.+| .+++| +|+..||+.++. ++. ...++.++..+|.|++|.|+|+||+.++...
T Consensus 5 ~~~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 81 (93)
T 1k2h_A 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 456778999999999 79999 999999998643 332 2358899999999999999999999988654
No 255
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=98.41 E-value=1.5e-07 Score=72.35 Aligned_cols=65 Identities=25% Similarity=0.407 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc----CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ----QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~----~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
....+.++ +|+.+|.+++|+|+.+||..++ .++ ....+..++..+|.+++|.|+|+||+.++...
T Consensus 5 ~~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 5 DDEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp --CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC
T ss_pred ccHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh
Confidence 34567899 9999999999999999999853 333 23358899999999999999999999988654
No 256
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=98.41 E-value=3.3e-07 Score=78.35 Aligned_cols=65 Identities=17% Similarity=0.190 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC-CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ-NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~-~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
..+.++++++|+.|| |++|+|+.+|++.++ ..+. ...+..|+..+|.|++|.|+|+||+.+|...
T Consensus 47 ~~e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li 113 (139)
T 2jq6_A 47 GKDKPTYDEIFYTLS-PVNGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFALANHLI 113 (139)
T ss_dssp GGTHHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 356789999999999 999999999999964 3332 3458999999999999999999999988654
No 257
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.40 E-value=2.5e-07 Score=100.93 Aligned_cols=129 Identities=6% Similarity=0.014 Sum_probs=81.3
Q ss_pred hCCCCCCCccHHHHhcchhccCC--HHHHHHHHHh-------cCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhc
Q psy4132 249 LDLDNSGALSIDEFMSLPELQQN--PLVQRVIDIF-------DEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYD 319 (473)
Q Consensus 249 ~D~d~~G~Is~~el~~l~~~~~~--~~~~~l~~~~-------D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D 319 (473)
||+|++|.|+.+|+.+++..... ..+..+++.+ |.+++|.|+|+||..++..+. ..++++.+|+.||
T Consensus 164 fd~n~dG~Is~kEl~~~l~~~~~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~----~R~EI~eiF~~y~ 239 (816)
T 3qr0_A 164 TVEMEKNKIPVKAIQKCLSKDKDDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL----ERSEIEGIFKELS 239 (816)
T ss_dssp HTSCCSSEEEHHHHHHHHCSCHHHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC----CCTHHHHHHHHHT
T ss_pred ccCCCCCCCCHHHHHHHHHhcCChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC----CHHHHHHHHHHHc
Confidence 45555555555555554322111 1255666666 567889999999999998763 3457999999999
Q ss_pred CCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhcc--C----CCCCeeHHhhh
Q psy4132 320 IDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDK--L----PDSPIYLKTYS 393 (473)
Q Consensus 320 ~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~--~----~dg~Is~~EF~ 393 (473)
.|++|.++. ++..++.-... +. ...+. .- ..++.+++.++++.++. + ++|.+++++|.
T Consensus 240 ~dg~~~mT~-eL~~FL~~~Q~---E~----~~~~~-------~~-~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~ 303 (816)
T 3qr0_A 240 KNKGNITTV-MFRDFLNDMQR---HP----SLHKT-------LF-PLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLL 303 (816)
T ss_dssp TTSSSEEHH-HHHHHHHHTSS---CT----TSCTT-------TS-CCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHH
T ss_pred cCCCCcccH-HHHHHHHHhCC---cc----ccccc-------cc-cccCHHHHHHHHHHhccccchhhhccCCccHHHHH
Confidence 887754444 44444433321 00 00000 00 02688889999988876 4 68999999998
Q ss_pred ccce
Q psy4132 394 SGVK 397 (473)
Q Consensus 394 ~~~~ 397 (473)
..+.
T Consensus 304 ~yL~ 307 (816)
T 3qr0_A 304 YFLM 307 (816)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 7665
No 258
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=98.39 E-value=3.5e-07 Score=73.22 Aligned_cols=66 Identities=23% Similarity=0.402 Sum_probs=54.5
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcchh------cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE------LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~------~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
.......++++|+.||. ++|+|+.+||+.++. ++ ....++.++..+|.|++|.|+|+||+.++...
T Consensus 4 l~~~~~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 78 (96)
T 1a4p_A 4 MEHAMETMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (96)
T ss_dssp HHHHHHHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 34567889999999994 567999999999643 22 34568999999999999999999999988654
No 259
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.38 E-value=5.4e-07 Score=68.47 Aligned_cols=59 Identities=15% Similarity=0.167 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhhCCCCCCCccHHHHhcchhccCCHHHHHHHHHhc-CC----CCCcccHHHHHHHHhh
Q psy4132 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFD-ED----RNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~~~~~~~l~~~~D-~d----~dG~I~~~EF~~~l~~ 300 (473)
..++++++|+.| ++++|+|+..||+. ......++.|++.+| .+ ++|.|+|++|+.+|..
T Consensus 8 ~~eel~eAFr~f-~dg~G~It~~eLr~---~lt~eevd~~i~~~d~~dg~~~~dG~idY~eF~~~m~~ 71 (75)
T 1h8b_A 8 TAEQVIASFRIL-ASDKPYILAEELRR---ELPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYG 71 (75)
T ss_dssp THHHHHHHHHHH-TTSCSSBCHHHHHH---HSCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTC
T ss_pred CHHHHHHHHHHH-hcCCCCcCHHHHHh---cCCHHHHHHHHHhcCcccCCCCCCCcCcHHHHHHHHhc
Confidence 568999999999 99999999999999 233567999999999 56 5899999999998753
No 260
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=98.38 E-value=3.4e-07 Score=73.99 Aligned_cols=69 Identities=19% Similarity=0.159 Sum_probs=48.7
Q ss_pred HHHHHHhHHhc-CCCC-chhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 309 SKLKFAFRIYD-IDND-DDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 309 e~l~~~F~~~D-~d~d-g~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
+.++.+|+.|| +|++ |.++. .||..+|...+.. . .| +.++++++.++++.+|.|+||.
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~---~EL~~~l~~~l~~---~-------------lg-~~~~~~ev~~~i~~~D~dgDG~ 69 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQ---AELKELLQKELAT---W-------------TP-TEFRECDYNKFMSVLDTNKDCE 69 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECH---HHHHHHHHHHTTT---C-------------CC-CTTCHHHHHHHHHHHHHCCCSC
T ss_pred HHHHHHHHHHhhcCCCCCEECH---HHHHHHHHHHhhh---h-------------cC-CCCCHHHHHHHHHHhCCCCCCC
Confidence 56888999997 7877 44444 4444444321110 0 01 2478999999999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+|+||+..+.
T Consensus 70 Idf~EF~~~~~ 80 (101)
T 3nso_A 70 VDFVEYVRSLA 80 (101)
T ss_dssp EEHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99999987654
No 261
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=98.38 E-value=6.5e-07 Score=71.59 Aligned_cols=66 Identities=26% Similarity=0.434 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHhhC-CCCCC-CccHHHHhcchh--c-------cCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 236 VVDIRRLGKRFRKLD-LDNSG-ALSIDEFMSLPE--L-------QQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D-~d~~G-~Is~~el~~l~~--~-------~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
......+..+|+.+| .+++| +|+.+||+.+.. + .....++.++..+|.|++|.|+|+||+.++...
T Consensus 9 ~~~~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~ 85 (99)
T 1qls_A 9 ERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 85 (99)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 345678999999998 99999 999999998643 1 234568999999999999999999999988654
No 262
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=98.38 E-value=1.9e-07 Score=72.10 Aligned_cols=64 Identities=22% Similarity=0.420 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc-----CCHHHHH----HHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ-----QNPLVQR----VIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~-----~~~~~~~----l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
..+.++.+|+.+|.|++|+|+.+||..+. ..+ ....++. ++..+|.|++|.|+|+||+..+..+
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~~ 78 (83)
T 1yx7_A 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAEL 78 (83)
T ss_dssp SCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHHH
Confidence 45678999999999999999999999853 233 2234666 9999999999999999999776543
No 263
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=98.37 E-value=3.6e-07 Score=71.54 Aligned_cols=66 Identities=23% Similarity=0.379 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHhhC-CCCCC-CccHHHHhcchh----cc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 236 VVDIRRLGKRFRKLD-LDNSG-ALSIDEFMSLPE----LQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D-~d~~G-~Is~~el~~l~~----~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
......++.+|+.+| ++++| +|+..||+.+.. ++ ....++.++..+|.|++|.|+|+||+.++...
T Consensus 6 ~~~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 80 (90)
T 1k8u_A 6 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 80 (90)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 445678999999999 69999 999999998643 33 34468999999999999999999999988654
No 264
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=98.35 E-value=3.1e-08 Score=83.38 Aligned_cols=89 Identities=12% Similarity=0.151 Sum_probs=43.1
Q ss_pred HHHHHHHhcCCCCCcccHHHHHH-----HHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCc
Q psy4132 274 VQRVIDIFDEDRNGEVDFKEFIQ-----GVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGT 348 (473)
Q Consensus 274 ~~~l~~~~D~d~dG~I~~~EF~~-----~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~ 348 (473)
++.++..+ +|.|+|+||+. ++..........+.++.+|+.|| |.+.. +++..+|..
T Consensus 14 i~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~---~El~~~l~~-------- 74 (123)
T 2kld_A 14 VKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNF---DELRQDLKG-------- 74 (123)
T ss_dssp -----------------------------------------CCSCSSTTTT----TCEEH---HHHHHHTTT--------
T ss_pred HHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCH---HHHHHHHHH--------
Confidence 45555544 89999999998 66654333444566788899997 44444 444444432
Q ss_pred cchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 349 MLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 349 i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
.| . +++++.++++.+|.|+||.|+++||...+.
T Consensus 75 -------------lG--~-t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~ 107 (123)
T 2kld_A 75 -------------KG--H-TDAEIEAIFTKYDQDGDQELTEHEHQQMRD 107 (123)
T ss_dssp -------------CC--S-SHHHHHHHHHHHSSSSCCEECSHHHHHCSC
T ss_pred -------------hC--C-CHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 23 2 788899999999999999999999987764
No 265
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=98.35 E-value=5.9e-07 Score=72.22 Aligned_cols=70 Identities=23% Similarity=0.246 Sum_probs=49.5
Q ss_pred HHHHHHhHHhc-CCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 309 SKLKFAFRIYD-IDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 309 e~l~~~F~~~D-~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
+.++.+|+.|| +|++||+++. .||..+|...+.. ..| ...+++++.++++.+|.|+||.|
T Consensus 11 ~~l~~~F~~fd~~dgdgG~Is~--~EL~~~l~~~lg~----------------~l~-~~~~~~ev~~~i~~~D~d~DG~I 71 (98)
T 3n22_A 11 AVLVTTFHKYSSQEGDKFKLSK--GEMKELLHKELPS----------------FVG-EKVDEEGLKKLMGSLDENSDQQV 71 (98)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCH--HHHHHHHHHHCHH----------------HHC-SSCCHHHHHHHHHHHCTTSSSSB
T ss_pred HHHHHHHHHHhccCCCCCeECH--HHHHHHHHHHhhh----------------hcc-CCCCHHHHHHHHHHhCCCCCCCC
Confidence 56889999998 7888544443 4555544421100 011 13788999999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+|+||+..+.
T Consensus 72 df~EF~~~~~ 81 (98)
T 3n22_A 72 DFQEYAVFLA 81 (98)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999987654
No 266
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=98.35 E-value=5.4e-07 Score=73.37 Aligned_cols=66 Identities=11% Similarity=0.283 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hcc---CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQ---QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~---~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
......++.+|+.+|.|++|+|+..||..+. ..+ ....+..++..+|.+++|.|+|+||+.++...
T Consensus 28 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~ 97 (107)
T 2d58_A 28 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 97 (107)
T ss_dssp HHHHHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHc
Confidence 4667889999999999999999999999853 333 23358899999999999999999999988654
No 267
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=98.29 E-value=1.3e-06 Score=69.39 Aligned_cols=70 Identities=19% Similarity=0.211 Sum_probs=47.4
Q ss_pred HHHHHHhHHhc-CCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 309 SKLKFAFRIYD-IDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 309 e~l~~~F~~~D-~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
+.++.+|+.|| +|+++|+++. .||..++...+.. .+ + ...+++++.++++.+|.|+||.|
T Consensus 10 ~~l~~~F~~fd~~dg~~G~Is~--~EL~~~l~~~lg~---~l-------------~-~~~~~~ev~~~i~~~D~d~DG~I 70 (93)
T 4eto_A 10 DVMVSTFHKYSGKEGDKFKLNK--SELKELLTRELPS---FL-------------G-KRTDEAAFQKLMSNLDSNRDNEV 70 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCH--HHHHHHHHHHCGG---GC-----------------CCHHHHHHHHHHHCTTSSSSB
T ss_pred HHHHHHHHHHcccCCCCCeECH--HHHHHHHHHHhhh---hc-------------c-CCCCHHHHHHHHHHHCCCCCCCC
Confidence 67889999998 5665334333 4444444421110 00 0 13688999999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+|+||+..+.
T Consensus 71 df~EF~~~~~ 80 (93)
T 4eto_A 71 DFQEYCVFLS 80 (93)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999987654
No 268
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=98.28 E-value=3.4e-07 Score=76.49 Aligned_cols=58 Identities=17% Similarity=0.286 Sum_probs=34.4
Q ss_pred HHHHHHHHHhhhh------hhhHHHHHHH-----HhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHc
Q psy4132 166 SSNINNAFKDLNQ------LMSMAKEMVE-----ISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVG 227 (473)
Q Consensus 166 ~~~l~eaF~~lD~------~~e~~~~l~~-----lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~ 227 (473)
...|+.+|..||. ..|+...|++ ++..++.. ++..++.. +|.|+||.|+|+||+.+|+
T Consensus 14 ie~l~~~F~~yd~ddG~Is~~EL~~~l~~~~~~~l~~~~~~~--~v~~~i~~--~D~d~DG~IdF~EF~~lm~ 82 (121)
T 4drw_A 14 METMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPL--AVDKIMKD--LDQCRDGKVGFQSFFSLIA 82 (121)
T ss_dssp HHHHHHTTGGGSCTTCSCCHHHHHHHTTTSCHHHHTTSSCTT--HHHHHHHH--HCTTCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEcHHHHHHHHHHHhhhhcccCCCHH--HHHHHHHH--HcCCCCCcCcHHHHHHHHH
Confidence 3467777777766 4555555543 44444444 44444443 6777777777777777766
No 269
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=98.27 E-value=1.8e-06 Score=70.14 Aligned_cols=70 Identities=19% Similarity=0.180 Sum_probs=48.0
Q ss_pred HHHHHHhHHhc-CCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 309 SKLKFAFRIYD-IDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 309 e~l~~~F~~~D-~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
+.++.+|+.|| +|+++|++.. .||..+|...+... .+ ..++++++.++++.+|.|+||.|
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~--~EL~~~l~~~lg~~----------------l~-~~~~~~ev~~~i~~~D~dgDG~I 73 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNK--SELKELLTRELPSW----------------LG-KRTDEAAFQKLMSNLDSNRDNEV 73 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCH--HHHHHHHHHHCGGG----------------SC-SSCCHHHHHHHHHHHCTTCSSSB
T ss_pred HHHHHHHHHHhccCCCCCeECH--HHHHHHHHHHcchh----------------cc-CCCCHHHHHHHHHHHcCCCCCCC
Confidence 57889999998 6665334433 44444444211100 01 13688999999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+|+||+..+.
T Consensus 74 df~EF~~~m~ 83 (104)
T 3zwh_A 74 DFQEYCVFLS 83 (104)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999987664
No 270
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.27 E-value=6.8e-07 Score=72.37 Aligned_cols=60 Identities=18% Similarity=0.321 Sum_probs=49.3
Q ss_pred HHHHHHHhhCCCCCCCccHHHHhcchh-----c-cCC--------------HHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 241 RLGKRFRKLDLDNSGALSIDEFMSLPE-----L-QQN--------------PLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 241 ~l~~~F~~~D~d~~G~Is~~el~~l~~-----~-~~~--------------~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
.++.+|+.||.|++|+|+.+||..+.. . +.. ..+..++..+|.|++|.|+|+||+.++..
T Consensus 21 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 100 (103)
T 1snl_A 21 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR 100 (103)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred CHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHhc
Confidence 477899999999999999999998643 1 221 12788999999999999999999988753
No 271
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=98.26 E-value=1e-06 Score=64.63 Aligned_cols=63 Identities=14% Similarity=0.229 Sum_probs=47.3
Q ss_pred HHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeH
Q psy4132 310 KLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYL 389 (473)
Q Consensus 310 ~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~ 389 (473)
.++.+|+.+|.|++|.+... ++..++. .. | ..++++++..+++.+|.|++|.|++
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~---el~~~l~--------------------~~-~-~~~~~~~~~~~~~~~D~~~dg~i~~ 56 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLD---EFREVAL--------------------AF-S-PYFTQEDIVKFFEEIDVDGNGELNA 56 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHH---HHHHHHH--------------------HT-C-TTSCHHHHHHHHHHHCCSSSSEECH
T ss_pred HHHHHHHHHCCCCCCcCcHH---HHHHHHH--------------------Hh-C-CCCCHHHHHHHHHHHCCCCCCcCcH
Confidence 46789999999999655553 3333332 21 1 1478899999999999999999999
Q ss_pred Hhhhccce
Q psy4132 390 KTYSSGVK 397 (473)
Q Consensus 390 ~EF~~~~~ 397 (473)
+||...+.
T Consensus 57 ~ef~~~~~ 64 (67)
T 1tiz_A 57 DEFTSCIE 64 (67)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987653
No 272
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=98.24 E-value=1.2e-06 Score=65.20 Aligned_cols=66 Identities=24% Similarity=0.301 Sum_probs=50.6
Q ss_pred CcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCC
Q psy4132 306 DRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDS 385 (473)
Q Consensus 306 ~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg 385 (473)
...+.++.+|+.+|.|++|.+.. .++..++.. . | ..++++++..+++.+|.+++|
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~i~~---~el~~~l~~--------------------~-~-~~~~~~~~~~~~~~~d~~~~g 57 (71)
T 2b1u_A 3 AGLEDLQVAFRAFDQDGDGHITV---DELRRAMAG--------------------L-G-QPLPQEELDAMIREADVDQDG 57 (71)
T ss_dssp TTHHHHHHHHTTSCCSSSSEEEH---HHHHHHGGG--------------------T-T-CSSCHHHHHHHHHHCCSSSSS
T ss_pred ccHHHHHHHHHHHCCCCCCcCcH---HHHHHHHHH--------------------h-C-CCCCHHHHHHHHHHhCCCCCC
Confidence 35678999999999999965555 344444432 1 2 137889999999999999999
Q ss_pred CeeHHhhhccc
Q psy4132 386 PIYLKTYSSGV 396 (473)
Q Consensus 386 ~Is~~EF~~~~ 396 (473)
.|+++||...+
T Consensus 58 ~i~~~eF~~~~ 68 (71)
T 2b1u_A 58 RVNYEEFARML 68 (71)
T ss_dssp EEETTHHHHHH
T ss_pred cCcHHHHHHHH
Confidence 99999998765
No 273
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.21 E-value=1.6e-06 Score=68.75 Aligned_cols=63 Identities=11% Similarity=0.031 Sum_probs=47.3
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
.+.++.+|+.||+|++|.+... ++..++. +. | ++.+++.++++.+|.|+||.|
T Consensus 8 ~~~~~~~F~~~D~d~dG~I~~~---el~~~l~--------------------~~-g---~~~~~~~~i~~~~D~d~dG~i 60 (92)
T 1fi6_A 8 RQYYVNQFKTIQPDLNGFIPGS---AAKEFFT--------------------KS-K---LPILELSHIWELSDFDKDGAL 60 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHH---HHHHHHH--------------------HH-S---SCHHHHHHHHHHHCTTCSSEE
T ss_pred HHHHHHHHHHHCCCCCCcCcHH---HHHHHHH--------------------Hc-C---CCHHHHHHHHHHHCCCCCCCC
Confidence 3567889999999998555553 3333332 21 3 678889999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+++||..++.
T Consensus 61 ~~~EF~~~~~ 70 (92)
T 1fi6_A 61 TLDEFCAAFH 70 (92)
T ss_dssp EHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999987664
No 274
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=98.20 E-value=2.9e-06 Score=68.52 Aligned_cols=85 Identities=9% Similarity=0.076 Sum_probs=59.6
Q ss_pred CcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCC
Q psy4132 287 GEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLEL 366 (473)
Q Consensus 287 G~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ 366 (473)
..++++++...+..... ...+.++.+|+.||.|++|.+... ++..+|. .. | ..
T Consensus 4 ~~~~~~~~~~~l~~~~~--~~~~~l~~~F~~~D~d~~G~i~~~---el~~~l~--------------------~~-g-~~ 56 (105)
T 1wlz_A 4 MATADRDILARLHKAVT--SHYHAITQEFENFDTMKTNTISRE---EFRAICN--------------------RR-V-QI 56 (105)
T ss_dssp CTTCCHHHHHHHHHHHH--HTHHHHHHHHHHHCTTCSSCBCHH---HHHHHHH--------------------HH-T-CC
T ss_pred cchhHHHHHHHHHHHHH--chHHHHHHHHHHHCCCCCCcCcHH---HHHHHHH--------------------Hh-C-CC
Confidence 34556677666655432 235778999999999998555553 3333332 22 2 14
Q ss_pred CCHHHHHHHHHHhccCCCCCeeHHhhhcccee
Q psy4132 367 LSPEDLLNSCLALDKLPDSPIYLKTYSSGVKV 398 (473)
Q Consensus 367 ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~v 398 (473)
++.+++..++..+|.|++|.|+++||...+.-
T Consensus 57 ~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~ 88 (105)
T 1wlz_A 57 LTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSS 88 (105)
T ss_dssp CCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC-
T ss_pred CCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc
Confidence 78899999999999999999999999987763
No 275
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.19 E-value=2.6e-06 Score=67.89 Aligned_cols=64 Identities=16% Similarity=0.096 Sum_probs=48.8
Q ss_pred cHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 307 RESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 307 ~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
..+.++.+|+.||+|++|.+.. +|+..++. +. | ++.+++.++++.+|.|+||.
T Consensus 8 ~~~~~~~~F~~~D~d~dG~I~~---~el~~~l~--------------------~~-g---~~~~~~~~i~~~~D~d~dG~ 60 (95)
T 1c07_A 8 EKAKYDEIFLKTDKDMDGFVSG---LEVREIFL--------------------KT-G---LPSTLLAHIWSLCDTKDCGK 60 (95)
T ss_dssp HHHHHHHHHHHHCTTCSSEECH---HHHHHHHH--------------------TT-T---CCHHHHHHHHHHHCTTCSSS
T ss_pred HHHHHHHHHHHhCCCCCCcEeH---HHHHHHHH--------------------Hc-C---CCHHHHHHHHHHHCCCCCCc
Confidence 3467889999999999955555 33333333 21 2 67888999999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+++||..++.
T Consensus 61 i~~~EF~~~~~ 71 (95)
T 1c07_A 61 LSKDQFALAFH 71 (95)
T ss_dssp EETTTHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999987654
No 276
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=98.19 E-value=6e-07 Score=65.79 Aligned_cols=63 Identities=10% Similarity=0.052 Sum_probs=46.7
Q ss_pred HHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCeeHHh
Q psy4132 312 KFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIYLKT 391 (473)
Q Consensus 312 ~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is~~E 391 (473)
+.+|+.+|.|++|.++..|+..++..+.. .++++++..+|+.+|.|++|.|+++|
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~-------------------------~~~~~~~~~~~~~~D~~~~g~i~~~e 57 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRA-------------------------IKNEQLLQLIFKSIDADGNGEIDQNE 57 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHCTTCSSSCCHHH
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHccC-------------------------CCcHHHHHHHHHHHCCCCCCCCCHHH
Confidence 56899999999976666444333333221 25567899999999999999999999
Q ss_pred hhccceee
Q psy4132 392 YSSGVKVL 399 (473)
Q Consensus 392 F~~~~~vl 399 (473)
|...+..+
T Consensus 58 f~~~~~~~ 65 (66)
T 3li6_A 58 FAKFYGSI 65 (66)
T ss_dssp HHHHHTCC
T ss_pred HHHHHHhc
Confidence 98776543
No 277
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=98.19 E-value=1.4e-06 Score=75.72 Aligned_cols=49 Identities=12% Similarity=0.099 Sum_probs=23.8
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHhhcccCCCcHHHHHHHhHHhcCCCC
Q psy4132 274 VQRVIDIFDEDRNGEVDFKEFIQGVSQFSVKGDRESKLKFAFRIYDIDND 323 (473)
Q Consensus 274 ~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~~~~~~e~l~~~F~~~D~d~d 323 (473)
+..+|..+|.|++|.|+.+||..++..+ .....++.+..+|+.+|.|++
T Consensus 52 l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~e~~~l~~~~D~d~d 100 (150)
T 2jjz_A 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKL-GVPKTHLEMKKMISEVTGGVS 100 (150)
T ss_dssp HHHHHTTSCCCTTSSBCHHHHHHHHHHT-TCCCCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHhCCCCcCcCCHHHHHHHHHHc-CCCCCHHHHHHHHHHHCCCCC
Confidence 3445555555555555555555555443 122233444445555554444
No 278
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.18 E-value=1.9e-06 Score=69.31 Aligned_cols=64 Identities=13% Similarity=0.047 Sum_probs=49.1
Q ss_pred cHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 307 RESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 307 ~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
..+.++.+|+.||+|++|.++. +|+..++. +. | ++.+++.++++.+|.|+||.
T Consensus 9 ~~~~~~~~F~~~D~d~dG~Is~---~el~~~l~--------------------~~-~---l~~~~l~~i~~~~D~d~dG~ 61 (99)
T 1qjt_A 9 GNPVYEKYYRQVEAGNTGRVLA---LDAAAFLK--------------------KS-G---LPDLILGKIWDLADTDGKGV 61 (99)
T ss_dssp TCTHHHHHHHHHCCTTSSCCCS---HHHHHHHH--------------------TS-S---SCHHHHHHHHHHHCCSSSSS
T ss_pred hHHHHHHHHHHHCCCCCCcCCH---HHHHHHHH--------------------Hc-C---CCHHHHHHHHHHHCCCCCCc
Confidence 3467899999999999955544 33333332 21 2 67889999999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+++||..++.
T Consensus 62 i~~~EF~~~~~ 72 (99)
T 1qjt_A 62 LSKQEFFVALR 72 (99)
T ss_dssp CCSHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999987765
No 279
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=98.17 E-value=3e-06 Score=64.34 Aligned_cols=64 Identities=20% Similarity=0.252 Sum_probs=48.3
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
++.++.+|+.||.|++|.+... ++..++. .. | .++++++..++..+|.|++|.|
T Consensus 2 ~~~l~~~F~~~D~~~~G~i~~~---el~~~l~--------------------~~-g--~~~~~~~~~~~~~~D~~~dg~i 55 (78)
T 1k9u_A 2 ADDMERIFKRFDTNGDGKISLS---ELTDALR--------------------TL-G--STSADEVQRMMAEIDTDGDGFI 55 (78)
T ss_dssp -CHHHHHHHHHCTTCSSEECHH---HHHHHHH--------------------HH-H--TCCHHHHHHHHHHHCTTCSSSE
T ss_pred hHHHHHHHHHHCCCCCCcCcHH---HHHHHHH--------------------Hh-C--CCCHHHHHHHHHHhCCCCCCeE
Confidence 3568899999999999655553 3333332 22 2 2788999999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+++||...+.
T Consensus 56 ~~~ef~~~~~ 65 (78)
T 1k9u_A 56 DFNEFISFCN 65 (78)
T ss_dssp EHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999987664
No 280
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.17 E-value=1.1e-05 Score=88.71 Aligned_cols=137 Identities=11% Similarity=0.225 Sum_probs=85.3
Q ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHh--hhh-------hhhHHHHHHHHhhhhhhhhhhhhcccccc-----cccCCCC
Q psy4132 149 TGIVGIERNIVEKQKETSSNINNAFKD--LNQ-------LMSMAKEMVEISKNISNKIINRQGEITED-----DSNKDRD 214 (473)
Q Consensus 149 ~gi~gi~r~~~~~~~~~~~~l~eaF~~--lD~-------~~e~~~~l~~lg~~~~~~~~~~~~~~~~~-----~~D~d~d 214 (473)
.|+..|+............-++++|.. +|+ ..++...|.. ... ++..++..- ..|..++
T Consensus 132 ~gL~~L~~~~~~~~~~~~~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~-----~~~--~v~~l~~~~d~~~~~~d~~~~ 204 (885)
T 3ohm_B 132 EELFKLAMNILAQNASRNTFLRKAYTKLKLQVNQDGRIPVKNILKMFSA-----DKK--RVETALESCGLKFNRSESIRP 204 (885)
T ss_dssp HHHHHHHHCHHHHTCCHHHHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG-----GHH--HHHHHHHTTTCCCSTTCEECG
T ss_pred HHHHHHHhhhhhcccCHHHHHHHHHHHhcCccCCCCccCHHHHHHHHhc-----CHH--HHHHHHHHhCCCccccccCCC
Confidence 344445544432222335678888887 666 2233332221 111 233333221 1233377
Q ss_pred CceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-ccCC-------------HHHHHHHHH
Q psy4132 215 GKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQN-------------PLVQRVIDI 280 (473)
Q Consensus 215 G~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~~~-------------~~~~~l~~~ 280 (473)
|.|+|+||..++.... ...+++.+|+.+|.+++|+|+.+||..++. .... ..+..|++.
T Consensus 205 g~i~feEF~~f~~~l~-------~R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k 277 (885)
T 3ohm_B 205 DEFSLEIFERFLNKLC-------LRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEK 277 (885)
T ss_dssp GGCCHHHHHHHHHHHS-------CCHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHhcC-------CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHH
Confidence 8899999999887311 235789999999999999999999988532 2111 347888999
Q ss_pred hcCC----CCCcccHHHHHHHHh
Q psy4132 281 FDED----RNGEVDFKEFIQGVS 299 (473)
Q Consensus 281 ~D~d----~dG~I~~~EF~~~l~ 299 (473)
++.+ ++|.|++++|..+|.
T Consensus 278 ~e~~~~~~~~g~LsldgF~~yL~ 300 (885)
T 3ohm_B 278 YEPNQQFLERDQMSMEGFSRYLG 300 (885)
T ss_dssp HCCCHHHHHTTEECHHHHHHHHT
T ss_pred hcCChhhhccCccchhhhhhhcc
Confidence 9888 788999999988873
No 281
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=98.17 E-value=2e-06 Score=70.89 Aligned_cols=71 Identities=18% Similarity=0.171 Sum_probs=49.0
Q ss_pred HHHHHHHhHHhc-CCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 308 ESKLKFAFRIYD-IDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 308 ~e~l~~~F~~~D-~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
.+.++.+|+.|| +|++||++.. .||..+|...+.. ..| ..++++++.++++.+|.|+||.
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~--~EL~~~l~~~l~~----------------~lg-~~~t~~ev~~li~~~D~dgdG~ 81 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNK--SELKELLTRELPS----------------FLG-KRTDEAAFQKLMSNLDSNRDNE 81 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCH--HHHHHHHHHHCGG----------------GGT-TCCCTTHHHHHHHHHCSSSSSC
T ss_pred HHHHHHHHHHHcccCCCCCEECH--HHHHHHHHHHcch----------------hcC-CCCCHHHHHHHHHHhCCCCCCc
Confidence 467889999999 7888633333 4444444321110 011 1367888999999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+|+||+..+.
T Consensus 82 Idf~EF~~~m~ 92 (113)
T 2lnk_A 82 VDFQEYCVFLS 92 (113)
T ss_dssp BCHHHHHHHHH
T ss_pred EeHHHHHHHHH
Confidence 99999987653
No 282
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=98.16 E-value=2.9e-06 Score=64.16 Aligned_cols=65 Identities=17% Similarity=0.235 Sum_probs=48.8
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
.+.++.+|+.||.|++|.+... ++..++. .. |. .++++++..++..+|.+++|.|
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~---el~~~l~--------------------~~-g~-~~~~~~~~~~~~~~d~~~~g~i 60 (77)
T 2joj_A 6 KQEIKEAFDLFDTNKTGSIDYH---ELKVAMR--------------------AL-GF-DVKKPEILELMNEYDREGNGYI 60 (77)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHH---HHHHHHH--------------------HH-TC-CCHHHHHHHHHHHHCCSSSSEE
T ss_pred HHHHHHHHHHhCCCCCCCCcHH---HHHHHHH--------------------Hh-CC-CCCHHHHHHHHHHHCCCCCCcC
Confidence 4678899999999999666553 3333332 21 21 3778889999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+++||...+.
T Consensus 61 ~~~eF~~~~~ 70 (77)
T 2joj_A 61 GFDDFLDIMT 70 (77)
T ss_dssp EHHHHHHHHT
T ss_pred cHHHHHHHHH
Confidence 9999987653
No 283
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=98.16 E-value=4.4e-06 Score=65.59 Aligned_cols=67 Identities=22% Similarity=0.283 Sum_probs=50.8
Q ss_pred cHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 307 RESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 307 ~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
..+.++.+|+.||.|++|.+... ++..++. .. |. .++++++..++..+|.|++|.
T Consensus 7 ~~~~l~~~F~~~D~d~~G~i~~~---el~~~l~--------------------~~-g~-~~~~~~~~~l~~~~d~~~dg~ 61 (92)
T 2kn2_A 7 AEEELKEAFKVFDKDQNGYISAS---ELRHVMI--------------------NL-GE-KLTDEEVEQMIKEADLDGDGQ 61 (92)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHH---HHHHHHH--------------------HT-TC-CCCHHHHHHHHHHHCSSCCSS
T ss_pred HHHHHHHHHHHHCCCCCCeEcHH---HHHHHHH--------------------Hh-CC-CCCHHHHHHHHHHhCCCCCCc
Confidence 45678999999999999655553 3333333 21 21 478999999999999999999
Q ss_pred eeHHhhhcccee
Q psy4132 387 IYLKTYSSGVKV 398 (473)
Q Consensus 387 Is~~EF~~~~~v 398 (473)
|+++||...+..
T Consensus 62 i~~~eF~~~~~~ 73 (92)
T 2kn2_A 62 VNYEEFVKMMMT 73 (92)
T ss_dssp EEHHHHHHHHHH
T ss_pred EeHHHHHHHHHh
Confidence 999999877653
No 284
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=98.15 E-value=3.8e-06 Score=69.70 Aligned_cols=67 Identities=18% Similarity=0.270 Sum_probs=56.7
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCccHHHHhcch-hccC-CHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 234 KMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQ-NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 234 ~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~~~-~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
....+..++.++|+.+|+ ++|+|+.+|++.++ ..+. ...+.+|++..|.|++|.|+|+||+.+|...
T Consensus 27 it~ee~~~y~~iF~~lD~-~dG~Isg~elr~~~~~sgLp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~Li 95 (121)
T 3fia_A 27 ITVEERAKHDQQFHSLKP-ISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLI 95 (121)
T ss_dssp CCHHHHHHHHHHHHHTCC-BTTBEEHHHHHHHHGGGCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCC-CCCeECHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 346778899999999999 89999999999964 3332 3458999999999999999999999988654
No 285
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=98.14 E-value=5.7e-06 Score=64.74 Aligned_cols=65 Identities=20% Similarity=0.197 Sum_probs=49.0
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
.+.++.+|+.||.|++|.+... ++..++. .. |. .++++++..++..+|.|++|.|
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~---el~~~l~--------------------~~-g~-~~~~~~~~~l~~~~D~~~dg~i 73 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTK---ELGTVMR--------------------ML-GQ-NPTKEELDAIIEEVDEDGSGTI 73 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHH---HHHHHHH--------------------HT-TC-CCCHHHHHHHHHHHCTTCCSSE
T ss_pred HHHHHHHHHHHCCCCCCcCcHH---HHHHHHH--------------------Hh-CC-CCCHHHHHHHHHHhCCCCCCeE
Confidence 4678899999999999655553 3333332 22 21 4788999999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+++||...+.
T Consensus 74 ~~~eF~~~~~ 83 (90)
T 1avs_A 74 DFEEFLVMMV 83 (90)
T ss_dssp EHHHHHHHHH
T ss_pred eHHHHHHHHH
Confidence 9999987654
No 286
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=98.13 E-value=2.1e-06 Score=70.00 Aligned_cols=67 Identities=16% Similarity=0.134 Sum_probs=46.0
Q ss_pred HHHHHHhHHhc-CCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 309 SKLKFAFRIYD-IDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 309 e~l~~~F~~~D-~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
+.++.+|+.|| +|++||++.. .||..+|... .|....+++++.++++.+|.|+||.|
T Consensus 22 ~~l~~aF~~fD~~dg~~G~Is~--~EL~~~l~~~--------------------lg~~~~~~~ev~~li~~~D~d~dG~I 79 (106)
T 2h2k_A 22 ETVVTTFFTFARQEGRKDSLSV--NEFKELVTQQ--------------------LPHLLKDVGSLDEKMKSLDVNQDSEL 79 (106)
T ss_dssp HHHHHHHHHHHTSSSSTTEECH--HHHHHHHHHH--------------------CTTTTTTCCCHHHHHHHHCTTCSSSE
T ss_pred HHHHHHHHHHcccCCCCCEECH--HHHHHHHHHH--------------------cCcCCCCHHHHHHHHHHHCCCCCCCC
Confidence 57899999999 7887433333 4444444321 11001124678999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+|+||+..+.
T Consensus 80 df~EF~~~~~ 89 (106)
T 2h2k_A 80 KFNEYWRLIG 89 (106)
T ss_dssp EHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999987654
No 287
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=98.12 E-value=3.2e-06 Score=66.57 Aligned_cols=63 Identities=19% Similarity=0.248 Sum_probs=45.5
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
.+.++.+|+.||.|++|.+... |+..++. .. | ++++++..+|..+|.|+||.|
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~---El~~~l~--------------------~~-g---~~~~~~~~~~~~~D~d~dg~I 78 (91)
T 2pmy_A 26 LARLRSVFAACDANRSGRLERE---EFRALCT--------------------EL-R---VRPADAEAVFQRLDADRDGAI 78 (91)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHH---HHHHHHH--------------------HT-T---CCHHHHHHHHHHHCTTCSSEE
T ss_pred HHHHHHHHHHHCCCCCCCCcHH---HHHHHHH--------------------Hc-C---cCHHHHHHHHHHhCCCCCCCE
Confidence 3567788888888888544442 3333332 21 2 577889999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+++||...+.
T Consensus 79 ~~~EF~~~~~ 88 (91)
T 2pmy_A 79 TFQEFARGFL 88 (91)
T ss_dssp CHHHHTHHHH
T ss_pred eHHHHHHHHH
Confidence 9999987653
No 288
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=98.12 E-value=4.4e-06 Score=64.51 Aligned_cols=65 Identities=20% Similarity=0.234 Sum_probs=49.6
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
.+.++.+|+.||.|++|.+.. .++..++.. . |. .++++++..++..+|.+++|.|
T Consensus 13 ~~~l~~~F~~~D~d~~G~i~~---~el~~~l~~--------------------~-g~-~~~~~~~~~~~~~~d~~~~g~i 67 (85)
T 2ktg_A 13 QQEYKEAFQLFDKDNDNKLTA---EELGTVMRA--------------------L-GA-NPTKQKISEIVKDYDKDNSGKF 67 (85)
T ss_dssp HHHHHHHHHHTCTTCCSEEEH---HHHHHHHHT--------------------T-SS-CCCHHHHHHHHHHHSSSSCSEE
T ss_pred HHHHHHHHHHHCCCCCCcCcH---HHHHHHHHH--------------------h-CC-CCCHHHHHHHHHHhCCCCCCcC
Confidence 356889999999999965555 344434332 1 21 3788999999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+++||...+.
T Consensus 68 ~~~eF~~~~~ 77 (85)
T 2ktg_A 68 DQETFLTIML 77 (85)
T ss_dssp EHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999987664
No 289
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=98.12 E-value=6.4e-06 Score=66.37 Aligned_cols=70 Identities=14% Similarity=0.054 Sum_probs=46.9
Q ss_pred HHHHHHhHHhcCCC---CchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCC
Q psy4132 309 SKLKFAFRIYDIDN---DDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDS 385 (473)
Q Consensus 309 e~l~~~F~~~D~d~---dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg 385 (473)
+.++.+|+.||.++ +|.++. .||..+|...... .++ +..+++++.++++.+|.|+||
T Consensus 11 ~~l~~~F~~fD~~~g~~~G~Is~---~EL~~~l~~~~~~---~l~--------------~~~~~~ev~~~i~~~D~d~DG 70 (100)
T 3nxa_A 11 IVLVENFYKYVSKYSLVKNKISK---SSFREMLQKELNH---MLS--------------DTGNRKAADKLIQNLDANHDG 70 (100)
T ss_dssp HHHHHHHHHTSCTTCSCTTCBCH---HHHHHHHHHHSTT---TTC--------------SSHHHHHHHHHHHHSCCCSSC
T ss_pred HHHHHHHHHHcCcCCCCCCeEcH---HHHHHHHHHHccc---ccc--------------ccccHHHHHHHHHHhCCCCCC
Confidence 56899999999864 444444 3444444321110 000 113467899999999999999
Q ss_pred CeeHHhhhcccee
Q psy4132 386 PIYLKTYSSGVKV 398 (473)
Q Consensus 386 ~Is~~EF~~~~~v 398 (473)
.|+|+||+..+..
T Consensus 71 ~Idf~EF~~~m~~ 83 (100)
T 3nxa_A 71 RISFDEYWTLIGG 83 (100)
T ss_dssp CBCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHH
Confidence 9999999877653
No 290
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=98.11 E-value=4.5e-06 Score=67.13 Aligned_cols=71 Identities=20% Similarity=0.116 Sum_probs=49.4
Q ss_pred HHHHHHHhHHhc-CCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 308 ESKLKFAFRIYD-IDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 308 ~e~l~~~F~~~D-~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
.+.++.+|+.|| +|++||++.. .||..+|...+.. ..| ..++++++.++++.+|.|+||.
T Consensus 9 ~~~l~~~F~~fDd~dg~gG~I~~--~El~~~l~~~~~~----------------~lg-~~~~~~~v~~l~~~~D~d~dG~ 69 (99)
T 2y5i_A 9 MDALITVFHNYSGSEGDKYKLSK--GELKELLNAELTD----------------FLM-SQKDPMLVEKIMNDLDSNKDNE 69 (99)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECH--HHHHHHHHHHSGG----------------GGT-TSCCHHHHHHHHHHHCTTCSSS
T ss_pred HHHHHHHHHHHhccCCCcCcCCH--HHHHHHHHHHhhh----------------hcc-ccccHHHHHHHHHHHCCCCCCc
Confidence 356889999997 7888634333 4444444321110 011 1378899999999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+|+||+..+.
T Consensus 70 I~f~EF~~~~~ 80 (99)
T 2y5i_A 70 VDFNEFVVLVA 80 (99)
T ss_dssp EEHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99999987664
No 291
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=98.09 E-value=2.3e-06 Score=65.48 Aligned_cols=68 Identities=21% Similarity=0.300 Sum_probs=50.4
Q ss_pred CCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCC
Q psy4132 305 GDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPD 384 (473)
Q Consensus 305 ~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~d 384 (473)
....+.++ +|+.||.|++|.+.. .++..++.. . |...++++++..++..+|.+++
T Consensus 5 ~~~~~~l~-~F~~~D~d~~G~i~~---~el~~~l~~--------------------~-g~~~~~~~~~~~~~~~~D~~~d 59 (81)
T 1c7v_A 5 DDEEEILR-AFKVFDANGDGVIDF---DEFKFIMQK--------------------V-GEEPLTDAEVEEAMKEADEDGN 59 (81)
T ss_dssp --CHHHHH-HHHHHSCSGGGEECH---HHHHHHSST--------------------T-TTCCCCHHHHHHHHHHHCSSGG
T ss_pred ccHHHHHH-HHHHHCCCCCCcCCH---HHHHHHHHH--------------------h-CCCCCCHHHHHHHHHHhCCCCC
Confidence 34567889 999999999965555 444444432 1 1014788999999999999999
Q ss_pred CCeeHHhhhccce
Q psy4132 385 SPIYLKTYSSGVK 397 (473)
Q Consensus 385 g~Is~~EF~~~~~ 397 (473)
|.|+++||...+.
T Consensus 60 g~i~~~eF~~~~~ 72 (81)
T 1c7v_A 60 GVIDIPEFMDLIK 72 (81)
T ss_dssp GSEEHHHHHHHHH
T ss_pred CcCcHHHHHHHHH
Confidence 9999999987664
No 292
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=98.09 E-value=3.5e-06 Score=67.18 Aligned_cols=71 Identities=17% Similarity=0.139 Sum_probs=49.2
Q ss_pred HHHHHHHhHHhc-CCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 308 ESKLKFAFRIYD-IDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 308 ~e~l~~~F~~~D-~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
.+.++.+|+.|| +|++||++.. +||..+|...+. . ..| ..++++++.++++.+|.|+||.
T Consensus 11 ~~~l~~~F~~fD~~dg~gg~I~~--~El~~~l~~~~~---------~-------~lg-~~~~~~~v~~~~~~~D~d~dG~ 71 (95)
T 2wcb_A 11 LEGIVNIFHQYSVRKGHFDTLSK--GELKQLLTKELA---------N-------TIK-NIKDKAVIDEIFQGLDANQDEQ 71 (95)
T ss_dssp HHHHHHHHHHHHTSSSSTTEEEH--HHHHHHHHHHTH---------H-------HHH-HCCCHHHHHHHHTTSSSSTTSE
T ss_pred HHHHHHHHHHHhccCCCCCccCH--HHHHHHHHHHhh---------h-------hcc-ccccHHHHHHHHHHHcCCCCCc
Confidence 356889999999 7888634433 455544442110 0 001 1378889999999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+|+||+..+.
T Consensus 72 I~f~EF~~~~~ 82 (95)
T 2wcb_A 72 VDFQEFISLVA 82 (95)
T ss_dssp EEHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99999987653
No 293
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=98.09 E-value=6.2e-06 Score=65.21 Aligned_cols=69 Identities=17% Similarity=0.141 Sum_probs=47.8
Q ss_pred HHHHHHhHHhcCCCCc--hhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 309 SKLKFAFRIYDIDNDD--DYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 309 e~l~~~F~~~D~d~dg--~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
+.++.+|+.|| +++| |++.. .||..+|...+.. ..| ..++++++.++++.+|.|+||.
T Consensus 9 ~~l~~~F~~~D-~~dG~~g~Is~--~EL~~~l~~~~~~----------------~lg-~~~~~~~v~~~~~~~D~d~dG~ 68 (92)
T 3rm1_A 9 VALIDVFHQYS-GREGDKHKLKK--SELKELINNELSH----------------FLE-EIKEQEVVDKVMETLDSNGDGE 68 (92)
T ss_dssp HHHHHHHHHHH-TSSSSTTSBCH--HHHHHHHHHHCTT----------------TSC-CCCSHHHHHHHHHHHCTTSSSS
T ss_pred HHHHHHHHHHc-cCCCCcCeECH--HHHHHHHHHHhhh----------------hcc-CcccHHHHHHHHHHHcCCCCCC
Confidence 56889999999 6664 23332 4444444431110 012 2478999999999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+++||+..+.
T Consensus 69 I~f~EF~~~~~ 79 (92)
T 3rm1_A 69 CDFQEFMAFVA 79 (92)
T ss_dssp BCHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99999987664
No 294
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=98.08 E-value=5.9e-06 Score=63.98 Aligned_cols=64 Identities=19% Similarity=0.273 Sum_probs=49.5
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
.+.++.+|+.||.|++|.+.. .++..++. .. | .++++++..+++.+|.|++|.|
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~---~el~~~l~--------------------~~-g--~~~~~~~~~~~~~~D~~~dg~i 63 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISS---SELGDALK--------------------TL-G--SVTPDEVRRMMAEIDTDGDGFI 63 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEH---HHHHHHHH--------------------TT-T--TCCHHHHHHHHHHHCTTCSSEE
T ss_pred HHHHHHHHHHHCCCCCCCcCH---HHHHHHHH--------------------Hc-C--CCCHHHHHHHHHHhCCCCCCcC
Confidence 467899999999999955555 34443333 21 2 3788899999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+++||...+.
T Consensus 64 ~~~eF~~~~~ 73 (86)
T 2opo_A 64 SFDEFTDFAR 73 (86)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999987664
No 295
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=98.07 E-value=4.7e-06 Score=66.42 Aligned_cols=71 Identities=13% Similarity=0.055 Sum_probs=45.7
Q ss_pred HHHHHHHhHHhc-CCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 308 ESKLKFAFRIYD-IDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 308 ~e~l~~~F~~~D-~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
.+.++.+|+.|| +|+++|++.. .||..+|...+... .| ..++++++.++++.+|.|+||.
T Consensus 8 ~~~l~~~F~~fD~~dgd~G~I~~--~El~~~l~~~~~~~----------------lg-~~~~~~~v~~l~~~~D~d~dG~ 68 (95)
T 1j55_A 8 MGMIIDVFSRYSGSEGSTQTLTK--GELKVLMEKELPGF----------------LQ-SGKDKDAVDKLLKDLDANGDAQ 68 (95)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECH--HHHHHHHHHHSTTC----------------C-------CHHHHHHHHHCSSSSSS
T ss_pred HHHHHHHHHHHhccCCCCCcCCH--HHHHHHHHHHhHhh----------------cc-cccCHHHHHHHHHHhCCCCCCc
Confidence 357889999999 6875333333 45555544321100 01 1367778999999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+|+||+..+.
T Consensus 69 I~f~EF~~~~~ 79 (95)
T 1j55_A 69 VDFSEFIVFVA 79 (95)
T ss_dssp EEHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999987653
No 296
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=98.06 E-value=2.8e-06 Score=64.01 Aligned_cols=66 Identities=17% Similarity=0.176 Sum_probs=48.1
Q ss_pred cHHHHHHHhHHh-cCCCC-chhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCC--CHHHHHHHHHHhccC
Q psy4132 307 RESKLKFAFRIY-DIDND-DDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELL--SPEDLLNSCLALDKL 382 (473)
Q Consensus 307 ~~e~l~~~F~~~-D~d~d-g~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~l--s~~ei~~~~~~~D~~ 382 (473)
..+.++.+|+.| |.|++ |.+...++..++..+.. .+ +++++..++..+|.|
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~-------------------------~~~~~~~~~~~l~~~~D~~ 57 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGP-------------------------SLLKGMSTLDEMIEEVDKN 57 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGG-------------------------GSCTTSCSHHHHHHHHCTT
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCC-------------------------CcCCCHHHHHHHHHHhCCC
Confidence 456788889998 88888 77766444333333221 24 666789999999999
Q ss_pred CCCCeeHHhhhccce
Q psy4132 383 PDSPIYLKTYSSGVK 397 (473)
Q Consensus 383 ~dg~Is~~EF~~~~~ 397 (473)
++|.|+++||...+.
T Consensus 58 ~~g~i~~~eF~~~~~ 72 (76)
T 1qx2_A 58 GDGEVSFEEFLVMMK 72 (76)
T ss_dssp CSSEECHHHHHHHHH
T ss_pred CCCcEeHHHHHHHHH
Confidence 999999999987653
No 297
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=98.04 E-value=3.3e-06 Score=64.90 Aligned_cols=68 Identities=18% Similarity=0.164 Sum_probs=48.0
Q ss_pred CcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHH----HHHHhcc
Q psy4132 306 DRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLN----SCLALDK 381 (473)
Q Consensus 306 ~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~----~~~~~D~ 381 (473)
...+.++.+|+.||.|++|.+...++..++..+.. ...++++++.. +++.+|.
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~D~ 60 (83)
T 1yx7_A 4 KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDA-----------------------YKALSKDKVKEASAKLIKMADK 60 (83)
T ss_dssp CSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTT-----------------------CTTTTTTTTHHHHHHHHTTTCS
T ss_pred cHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcc-----------------------ccCCCHHHHHHHHHHHHHHhCC
Confidence 34568899999999999966666433333322210 01256666777 9999999
Q ss_pred CCCCCeeHHhhhccc
Q psy4132 382 LPDSPIYLKTYSSGV 396 (473)
Q Consensus 382 ~~dg~Is~~EF~~~~ 396 (473)
|+||.|+++||....
T Consensus 61 ~~dg~I~~~eF~~~~ 75 (83)
T 1yx7_A 61 NSDGKISKEEFLNAN 75 (83)
T ss_dssp SSCSCCSHHHHHHHH
T ss_pred CCCCCCcHHHHHHhh
Confidence 999999999998543
No 298
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=98.02 E-value=8.3e-06 Score=67.01 Aligned_cols=63 Identities=13% Similarity=0.056 Sum_probs=48.6
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
.+.++.+|+.||+|++|.+.. .|+..++. + ..++.+++..+++.+|.|+||.|
T Consensus 13 ~~~l~~~F~~~D~d~dG~I~~---~El~~~l~-----------------------~-~~~~~~~~~~i~~~~D~d~dG~I 65 (111)
T 2kgr_A 13 RLKYRQLFNSHDKTMSGHLTG---PQARTILM-----------------------Q-SSLPQAQLASIWNLSDIDQDGKL 65 (111)
T ss_dssp HHHHHHHHHTTSCSSCCEEEH---HHHHHHHH-----------------------T-TCCCHHHHHHHHHHHCSSCCSEE
T ss_pred HHHHHHHHHHHCCCCCCcCcH---HHHHHHHH-----------------------h-CCCCHHHHHHHHHHHCCCCCCCC
Confidence 467889999999999965555 33333333 1 13788899999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+++||+..+.
T Consensus 66 ~~~EF~~~~~ 75 (111)
T 2kgr_A 66 TAEEFILAMH 75 (111)
T ss_dssp EHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999987654
No 299
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=98.01 E-value=5e-06 Score=65.78 Aligned_cols=66 Identities=20% Similarity=0.227 Sum_probs=47.7
Q ss_pred HHHHHHhHHhc-CCCCc-hhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 309 SKLKFAFRIYD-IDNDD-DYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 309 e~l~~~F~~~D-~d~dg-~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
+.++.+|+.|| +|++| .+.. +|+..+|... .+...+++.++..+++.+|.|+||.
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~---~El~~~l~~~--------------------~~~~~~~~~~i~~~~~~~D~d~dG~ 66 (92)
T 2kax_A 10 TTMVTTFHKYSGREGSKLTLSR---KELKELIKKE--------------------LCLGEMKESSIDDLMKSLDKNSDQE 66 (92)
T ss_dssp HHHHHHHHHHHTTSSCSSEEEH---HHHHHHHHHH--------------------SCCTTTCCTTHHHHHHHHTTTCSSE
T ss_pred HHHHHHHHHHHhhCCCCCeeCH---HHHHHHHHHH--------------------cCCCCCCHHHHHHHHHHhCCCCCCc
Confidence 56889999999 99996 4554 3444444321 1100156677899999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+++||+..+.
T Consensus 67 I~f~EF~~~~~ 77 (92)
T 2kax_A 67 IDFKEYSVFLT 77 (92)
T ss_dssp EEHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99999987664
No 300
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=97.99 E-value=2.1e-06 Score=74.33 Aligned_cols=75 Identities=12% Similarity=0.242 Sum_probs=42.6
Q ss_pred ccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhhCCCCCCCccHHHHhcchhccCCHHHHHHHHHhcCCCCCc
Q psy4132 209 SNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGE 288 (473)
Q Consensus 209 ~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~~~~~~~l~~~~D~d~dG~ 288 (473)
+|.|++|.|+.+||..++... ........+..+|..+|.+++|.|+.+||..+.... ...+...|+.+|.+++|.
T Consensus 57 ~D~d~dG~I~~~El~~~l~~~----g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-~~~~~~aF~~~D~d~~g~ 131 (147)
T 1wy9_A 57 FDLNGNGDIDIMSLKRMLEKL----GVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-RSAILRMILMYEEKNKEH 131 (147)
T ss_dssp SCCCTTSSEEHHHHHHHHHHT----TCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-GGGGGGGGGGCCCC----
T ss_pred HCCCCCCcCcHHHHHHHHHHh----CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-HHHHHHHHHHHccCCCCC
Confidence 566777777777777666521 111234456666777777777777777776643322 334556667777776665
No 301
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=97.99 E-value=1.2e-05 Score=63.28 Aligned_cols=70 Identities=16% Similarity=0.104 Sum_probs=49.5
Q ss_pred HHHHHHHhHHhc-CCCCc-hhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCC
Q psy4132 308 ESKLKFAFRIYD-IDNDD-DYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDS 385 (473)
Q Consensus 308 ~e~l~~~F~~~D-~d~dg-~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg 385 (473)
.+.++.+|+.|| +|++| .+... ++..++...+. ...| ..++++++..++..+|.|+||
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~---el~~~l~~~~~----------------~~~g-~~~~~~~~~~~~~~~D~d~dg 67 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKK---ELKDLLQTELS----------------SFLD-VQKDADAVDKIMKELDENGDG 67 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHH---HHHHHHHHHTH----------------HHHH-CCCCHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHcccCCCcCccCHH---HHHHHHHHHHH----------------HHhC-CCCCHHHHHHHHHHhCCCCCC
Confidence 357889999999 79996 55553 33333332100 0012 147899999999999999999
Q ss_pred CeeHHhhhccce
Q psy4132 386 PIYLKTYSSGVK 397 (473)
Q Consensus 386 ~Is~~EF~~~~~ 397 (473)
.|+++||...+.
T Consensus 68 ~i~~~eF~~~~~ 79 (93)
T 1k2h_A 68 EVDFQEFVVLVA 79 (93)
T ss_dssp CCCHHHHHHHHH
T ss_pred cCcHHHHHHHHH
Confidence 999999987664
No 302
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=97.98 E-value=8.1e-06 Score=69.68 Aligned_cols=63 Identities=10% Similarity=0.005 Sum_probs=48.0
Q ss_pred cHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 307 RESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 307 ~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
..+.++.+|+.|| |++|.++.. ++..+|. + .| ++.+++.++++..|.|+||.
T Consensus 49 e~~~l~~~F~~fD-d~dG~Is~~---El~~~l~--------------------~-~g---l~~~el~~I~~~~D~d~dG~ 100 (139)
T 2jq6_A 49 DKPTYDEIFYTLS-PVNGKITGA---NAKKEMV--------------------K-SK---LPNTVLGKIWKLADVDKDGL 100 (139)
T ss_dssp THHHHHHHHHHSC-CSSSEEEHH---HHHHHHH--------------------H-TT---CCHHHHHHHHHHHCSSCCSE
T ss_pred HHHHHHHHHHHhC-CCCCeECHH---HHHHHHH--------------------H-hC---cCHHHHHHHHHHhCCCCCCc
Confidence 3577899999999 888555553 3333332 2 22 78889999999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+++||..++.
T Consensus 101 Ld~~EF~~am~ 111 (139)
T 2jq6_A 101 LDDEEFALANH 111 (139)
T ss_dssp EEHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99999987654
No 303
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=97.96 E-value=3.7e-06 Score=69.05 Aligned_cols=65 Identities=14% Similarity=0.047 Sum_probs=49.3
Q ss_pred CcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCC
Q psy4132 306 DRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDS 385 (473)
Q Consensus 306 ~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg 385 (473)
...+.++.+|+.||+|++|.+.. +++..++.. .| ++.+++.++++.+|.|+||
T Consensus 19 ~~~~~~~~~F~~~D~d~dG~Is~---~el~~~l~~---------------------~g---l~~~el~~i~~~~D~d~dG 71 (110)
T 1iq3_A 19 EQREYYVNQFRSLQPDPSSFISG---SVAKNFFTK---------------------SK---LSIPELSYIWELSDADCDG 71 (110)
T ss_dssp SSHHHHHHHHHHHCCSSSSEEEH---HHHHHHCCS---------------------SS---CSSCCHHHHHHHHCSSSCS
T ss_pred HHHHHHHHHHHHHCCCCCCeEcH---HHHHHHHHH---------------------cC---CCHHHHHHHHHHHcCCCCC
Confidence 34577899999999999965555 444444432 12 5566789999999999999
Q ss_pred CeeHHhhhccce
Q psy4132 386 PIYLKTYSSGVK 397 (473)
Q Consensus 386 ~Is~~EF~~~~~ 397 (473)
.|+++||..++.
T Consensus 72 ~I~~~EF~~~m~ 83 (110)
T 1iq3_A 72 ALTLPEFCAAFH 83 (110)
T ss_dssp EEEHHHHHHHHH
T ss_pred cCcHHHHHHHHH
Confidence 999999987654
No 304
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=97.95 E-value=1.5e-05 Score=61.68 Aligned_cols=65 Identities=8% Similarity=0.067 Sum_probs=48.2
Q ss_pred cHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHH---HHHHHHHhccCC
Q psy4132 307 RESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPED---LLNSCLALDKLP 383 (473)
Q Consensus 307 ~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~e---i~~~~~~~D~~~ 383 (473)
..+.++.+|..||.|++|.+... ++..+|. .. |. .+++++ +..++..+|.++
T Consensus 12 ~~~~l~~~F~~~D~d~~G~I~~~---el~~~l~--------------------~~-g~-~~~~~~~~~~~~~~~~~d~~~ 66 (86)
T 1j7q_A 12 EKDECMKIFDIFDRNAENIAPVS---DTMDMLT--------------------KL-GQ-TYTKRETEAIMKEARGPKGDK 66 (86)
T ss_dssp HHHHHHHHHHHHSTTTTSCBCHH---HHHHHHH--------------------HT-SC-CCSHHHHHHHHHHHHCSSCSS
T ss_pred HHHHHHHHHHHhCCCCCCcCcHH---HHHHHHH--------------------HH-cC-CCCHHHHHHHHHHHHHhCCCC
Confidence 35678999999999999655553 3333333 21 21 478888 999999999999
Q ss_pred CCCeeHHhhhccce
Q psy4132 384 DSPIYLKTYSSGVK 397 (473)
Q Consensus 384 dg~Is~~EF~~~~~ 397 (473)
+|.|++ ||...+.
T Consensus 67 ~g~i~~-eF~~~~~ 79 (86)
T 1j7q_A 67 KNIGPE-EWLTLCS 79 (86)
T ss_dssp CCBCTT-HHHHHHH
T ss_pred CCcCCH-HHHHHHH
Confidence 999999 9987653
No 305
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3
Probab=97.95 E-value=7.1e-06 Score=70.44 Aligned_cols=64 Identities=20% Similarity=0.183 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhhCCC-CCCCccHHHHhcchhcc--CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 238 DIRRLGKRFRKLDLD-NSGALSIDEFMSLPELQ--QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d-~~G~Is~~el~~l~~~~--~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
....+...|..+|.| ++|+|+..|+..+.... ...-+..+|+.+|.|+||.|+++||+..+...
T Consensus 75 ~~~~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg~~ 141 (151)
T 1sra_A 75 YIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIK 141 (151)
T ss_dssp GHHHHHHHHHHHCCTTCSSEECTTTTGGGGSTTSTTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTCC
T ss_pred chhHHHhHHHHHCCCCCCCcCcHHHHHHHHHHhcChHHHHHHHHHHhCCCCCCcCCHHHHHHHhCCC
Confidence 456789999999997 99999999999976432 23458999999999999999999999987654
No 306
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=97.94 E-value=1.4e-05 Score=65.02 Aligned_cols=62 Identities=11% Similarity=0.028 Sum_probs=46.7
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
.+.++.+|+.||+ ++|.++. .++..+|. +. | ++.+++.++++.+|.|+||.|
T Consensus 14 ~~~~~~~F~~~D~-~dG~Is~---~el~~~l~--------------------~~-g---l~~~el~~i~~~~D~d~dG~i 65 (106)
T 1eh2_A 14 KAKYDAIFDSLSP-VNGFLSG---DKVKPVLL--------------------NS-K---LPVDILGRVWELSDIDHDGML 65 (106)
T ss_dssp HHHHHHHHTTSCC-SSSCCBH---HHHHHHHH--------------------TT-T---CCHHHHHHHHHHHCSSCSSBC
T ss_pred HHHHHHHHHHhCC-CCCeEcH---HHHHHHHH--------------------Hc-C---CCHHHHHHHHHHHcCCCCCcC
Confidence 3567889999999 8854444 33333333 21 3 788899999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+++||..++.
T Consensus 66 d~~EF~~~m~ 75 (106)
T 1eh2_A 66 DRDEFAVAMF 75 (106)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999987654
No 307
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=97.92 E-value=1.8e-05 Score=65.09 Aligned_cols=66 Identities=11% Similarity=0.045 Sum_probs=47.5
Q ss_pred HHHHHHhHHhc-CCCCc-hhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCC---CC-CCHHHHHHHHHHhccC
Q psy4132 309 SKLKFAFRIYD-IDNDD-DYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGL---EL-LSPEDLLNSCLALDKL 382 (473)
Q Consensus 309 e~l~~~F~~~D-~d~dg-~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~---~~-ls~~ei~~~~~~~D~~ 382 (473)
+.++.+|+.|| +|++| .++. .||..+|.. ..|. .. ++++++..+++.+|.|
T Consensus 12 ~~l~~~F~~fD~~dgdG~~Is~---~El~~~l~~--------------------~lg~~~~~~~~~~~~v~~l~~~~D~d 68 (113)
T 1xk4_C 12 ETIINTFHQYSVKLGHPDTLNQ---GEFKELVRK--------------------DLQNFLKKENKNEKVIEHIMEDLDTN 68 (113)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCH---HHHHHHHHH--------------------HTTTTTTTGGGCHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhhcCCCCCEECH---HHHHHHHHH--------------------HhhhhhcccccCHHHHHHHHHHhCCC
Confidence 56889999999 49996 4555 344444431 1110 01 5788899999999999
Q ss_pred CCCCeeHHhhhccce
Q psy4132 383 PDSPIYLKTYSSGVK 397 (473)
Q Consensus 383 ~dg~Is~~EF~~~~~ 397 (473)
+||.|+++||+..+.
T Consensus 69 ~dG~I~f~EF~~~~~ 83 (113)
T 1xk4_C 69 ADKQLSFEEFIMLMA 83 (113)
T ss_dssp CSSSBCHHHHHHHHH
T ss_pred CCCCEeHHHHHHHHH
Confidence 999999999987654
No 308
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=97.90 E-value=2.8e-05 Score=84.92 Aligned_cols=122 Identities=12% Similarity=0.185 Sum_probs=94.1
Q ss_pred ccCCCCCceeHHHHHHHHccccccccchHHHHHHHHHHHhh-------CCCCCCCccHHHHhcch-hccCCHHHHHHHHH
Q psy4132 209 SNKDRDGKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKL-------DLDNSGALSIDEFMSLP-ELQQNPLVQRVIDI 280 (473)
Q Consensus 209 ~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~-------D~d~~G~Is~~el~~l~-~~~~~~~~~~l~~~ 280 (473)
+|.|+||+|++.|...++.. ......++.++++.. |.+++|.|+.+||..+. .+...+.+.++|+.
T Consensus 164 fd~n~dG~Is~kEl~~~l~~------~~~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~R~EI~eiF~~ 237 (816)
T 3qr0_A 164 TVEMEKNKIPVKAIQKCLSK------DKDDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLERSEIEGIFKE 237 (816)
T ss_dssp HTSCCSSEEEHHHHHHHHCS------CHHHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCCCTHHHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHh------cCChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCCHHHHHHHHHH
Confidence 67899999999999998872 122235677788877 67889999999999964 44456789999999
Q ss_pred hcCCCCCcccHHHHHHHHhhcccCC---------CcHHHHHHHhHHhcC--C----CCchhhHhhHHHHHHHHhc
Q psy4132 281 FDEDRNGEVDFKEFIQGVSQFSVKG---------DRESKLKFAFRIYDI--D----NDDDYYQALGNELIAALIE 340 (473)
Q Consensus 281 ~D~d~dG~I~~~EF~~~l~~~~~~~---------~~~e~l~~~F~~~D~--d----~dg~~~~~e~~el~~~L~~ 340 (473)
++.+++|.|+. ||..+|....... ...+.+..+++.||. + ++|.++. +++..+|.+
T Consensus 238 y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~Lsl---dgF~~yL~S 308 (816)
T 3qr0_A 238 LSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTK---EGLLYFLMC 308 (816)
T ss_dssp HTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECH---HHHHHHHHS
T ss_pred HccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccH---HHHHHHhhc
Confidence 99999999999 9999999875443 357788889988876 4 4544555 566666664
No 309
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=97.90 E-value=1.7e-05 Score=64.39 Aligned_cols=65 Identities=11% Similarity=0.051 Sum_probs=49.1
Q ss_pred HHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 308 ESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 308 ~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
.+.++.+|+.||.|++|.+... ++..++. .. | ..++++++..++..+|.|++|.|
T Consensus 31 ~~~l~~~F~~~D~d~~G~I~~~---el~~~l~--------------------~~-g-~~~~~~~~~~l~~~~D~d~dg~i 85 (107)
T 2d58_A 31 LEGFKEKYMEFDLNGNGDIDIM---SLKRMLE--------------------KL-G-VPKTHLELKKLIGEVSSGSGETF 85 (107)
T ss_dssp HHHHHHHHTTSCCCTTSCEEHH---HHHHHHH--------------------HT-T-CCCCHHHHHHHHHHHCSSSSSEE
T ss_pred HHHHHHHHHHHCCCCCCcCcHH---HHHHHHH--------------------Hh-C-CCCCHHHHHHHHHHhCCCCCCeE
Confidence 3568889999999999655553 3333332 22 2 14788999999999999999999
Q ss_pred eHHhhhccce
Q psy4132 388 YLKTYSSGVK 397 (473)
Q Consensus 388 s~~EF~~~~~ 397 (473)
+++||...+.
T Consensus 86 ~~~eF~~~~~ 95 (107)
T 2d58_A 86 SYPDFLRMML 95 (107)
T ss_dssp CHHHHHHHHS
T ss_pred cHHHHHHHHH
Confidence 9999987664
No 310
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=97.89 E-value=7.7e-06 Score=61.83 Aligned_cols=67 Identities=25% Similarity=0.303 Sum_probs=47.8
Q ss_pred cHHHHHHHhHHhcC-CCCc-hhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCC-CHHHHHHHHHHhccCC
Q psy4132 307 RESKLKFAFRIYDI-DNDD-DYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELL-SPEDLLNSCLALDKLP 383 (473)
Q Consensus 307 ~~e~l~~~F~~~D~-d~dg-~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~l-s~~ei~~~~~~~D~~~ 383 (473)
..+.++.+|+.||. |++| .+.. .++..++.. ..|. .+ +++++..++..+|.|+
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~---~el~~~l~~--------------------~~g~-~~~~~~~~~~~~~~~D~~~ 60 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSK---EELKQLIQA--------------------EFPS-LLKGPRTLDDLFQELDKNG 60 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECH---HHHHHHHHH--------------------HCSS-CCSSCCCSSHHHHHTCCCS
T ss_pred HHHHHHHHHHHHhccCCCcCEeCH---HHHHHHHHH--------------------Hhhh-hcccHHHHHHHHHHhcCCC
Confidence 45778999999999 9986 4444 334433332 1111 13 5666888999999999
Q ss_pred CCCeeHHhhhccce
Q psy4132 384 DSPIYLKTYSSGVK 397 (473)
Q Consensus 384 dg~Is~~EF~~~~~ 397 (473)
+|.|+++||...+.
T Consensus 61 dg~i~~~eF~~~~~ 74 (78)
T 1cb1_A 61 DGEVSFEEFQVLVK 74 (78)
T ss_dssp SSSEEHHHHHHHHH
T ss_pred CCCCcHHHHHHHHH
Confidence 99999999987653
No 311
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=97.87 E-value=3.2e-05 Score=62.18 Aligned_cols=61 Identities=23% Similarity=0.368 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHhhhh------hhhHHHHHHH-----Hhh--hhhhhhhhhhcccccccccCCCCCceeHHHHHHHHc
Q psy4132 163 KETSSNINNAFKDLNQ------LMSMAKEMVE-----ISK--NISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVG 227 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD~------~~e~~~~l~~-----lg~--~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~ 227 (473)
++...++++||+.||. ..++...|+. +|. .++.. ++..++.. +|.|+||.|+|+||+.+|.
T Consensus 6 ~~~~~~l~~~F~~fD~~~g~Is~~El~~~l~~~~~~~lg~~~~~~~~--ev~~l~~~--~D~d~dG~I~f~EF~~~~~ 79 (100)
T 1psr_A 6 ERSIIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTN--YLADVFEK--KDKNEDKKIDFSEFLSLLG 79 (100)
T ss_dssp HHHHHHHHHHHHHTCCTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCC--GGGTHHHH--HCTTCSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeECHHHHHHHHHHHhHhhhccccccCHH--HHHHHHHH--hCCCCCCcCcHHHHHHHHH
Confidence 3456689999999986 6677777776 555 55554 55556553 8999999999999999887
No 312
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=97.85 E-value=6.2e-06 Score=65.20 Aligned_cols=65 Identities=12% Similarity=0.109 Sum_probs=45.3
Q ss_pred HHHHHHhHHhcC-CCCc-hhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 309 SKLKFAFRIYDI-DNDD-DYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 309 e~l~~~F~~~D~-d~dg-~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
+.++.+|+.||. |++| .+... ++..++. +..|. .++..++..+++.+|.|+||.
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~---El~~~l~--------------------~~~g~-~~~~~~~~~l~~~~D~d~dG~ 65 (93)
T 1xk4_A 10 NSIIDVYHKYSLIKGNFHAVYRD---DLKKLLE--------------------TESPQ-YIRKKGADVWFKELDINTDGA 65 (93)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHH---HHHHHHH--------------------HHSCH-HHHTTCHHHHHHHHCTTCSSS
T ss_pred HHHHHHHHHHhhcCCCcCeECHH---HHHHHHH--------------------HHCcc-cCCHHHHHHHHHHhCCCCCCC
Confidence 578899999999 9996 55553 4444441 11110 122345788999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+++||...+.
T Consensus 66 I~~~EF~~~~~ 76 (93)
T 1xk4_A 66 VNFQEFLILVI 76 (93)
T ss_dssp BCHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99999987654
No 313
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=97.83 E-value=1.5e-05 Score=62.11 Aligned_cols=67 Identities=21% Similarity=0.271 Sum_probs=48.1
Q ss_pred HHHHHHhHHhc-CCCCc-hhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 309 SKLKFAFRIYD-IDNDD-DYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 309 e~l~~~F~~~D-~d~dg-~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
+.++.+|+.|| +|++| .+... ++..++...+. .| ..+++.++..+++.+|.|+||.
T Consensus 10 ~~l~~~F~~~D~~d~~G~~i~~~---el~~~l~~~~~------------------~g-~~~~~~~~~~~~~~~D~~~dg~ 67 (90)
T 1k8u_A 10 GLLVAIFHKYSGREGDKHTLSKK---ELKELIQKELT------------------IG-SKLQDAEIARLMEDLDRNKDQE 67 (90)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHH---HHHHHHHHHSC------------------CG-GGTTSHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHhccCCCCCcCCHH---HHHHHHHHhcc------------------cC-CCCCHHHHHHHHHHhCCCCCCC
Confidence 57888999999 69996 55553 44444432100 11 1367788999999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+++||...+.
T Consensus 68 i~~~eF~~~~~ 78 (90)
T 1k8u_A 68 VNFQEYVTFLG 78 (90)
T ss_dssp EEHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99999987654
No 314
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=97.78 E-value=2.1e-05 Score=62.63 Aligned_cols=69 Identities=14% Similarity=0.125 Sum_probs=47.0
Q ss_pred HHHHHHhHHhc-CCCCc-hhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCC
Q psy4132 309 SKLKFAFRIYD-IDNDD-DYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSP 386 (473)
Q Consensus 309 e~l~~~F~~~D-~d~dg-~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~ 386 (473)
+.++.+|..|| .|++| .+.. .++..++...+. .. .| ..+++.++..+++.+|.|+||.
T Consensus 13 ~~l~~~F~~~Dd~d~~G~~I~~---~el~~~l~~~~~---------~~-------~~-~~~~~~~~~~l~~~~D~~~dg~ 72 (99)
T 1qls_A 13 ESLIAIFQKHAGRDGNNTKISK---TEFLIFMNTELA---------AF-------TQ-NQKDPGVLDRMMKKLDLDSDGQ 72 (99)
T ss_dssp HHHHHHHHHHHTTSSCTTCBCH---HHHHHHHTTTSH---------HH-------HH-HCCCTHHHHHHHHHHCTTCSSS
T ss_pred HHHHHHHHHHHhcCCCcCeeCH---HHHHHHHHHHcc---------hh-------cc-ccCCHHHHHHHHHHhCCCCCCc
Confidence 46778888887 88885 4444 444444432110 00 00 0367888999999999999999
Q ss_pred eeHHhhhccce
Q psy4132 387 IYLKTYSSGVK 397 (473)
Q Consensus 387 Is~~EF~~~~~ 397 (473)
|+++||...+.
T Consensus 73 I~~~EF~~~~~ 83 (99)
T 1qls_A 73 LDFQEFLNLIG 83 (99)
T ss_dssp BCHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99999987654
No 315
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=97.69 E-value=4.4e-05 Score=61.48 Aligned_cols=75 Identities=16% Similarity=0.079 Sum_probs=45.6
Q ss_pred HHHHHHhHHhcCCCCchhhHhhHHHHHHHHhc----hhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCC
Q psy4132 309 SKLKFAFRIYDIDNDDDYYQALGNELIAALIE----PLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPD 384 (473)
Q Consensus 309 e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~----~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~d 384 (473)
..++.+|+.||.|++|.+... ++..++.. .+..........+. +......+..+|..+|.|+|
T Consensus 20 ~~~~~~F~~~D~d~dG~I~~~---El~~~l~~~~~~~~g~~~~~~~~~~~----------~e~~~~~~~~~~~~~D~d~d 86 (103)
T 1snl_A 20 FNPKTFFILHDINSDGVLDEQ---ELEALFTKELEKVYDPKNEEDDMREM----------EEERLRMREHVMKNVDTNQD 86 (103)
T ss_dssp CCHHHHHHHHCSSCCSEEEHH---HHHHHHHHHHHTTSCCSSCSSHHHHT----------THHHHHHHHHHHHHTCSSCS
T ss_pred CCHHHHHHHHcCCCCCcccHH---HHHHHHHHHHHHHhccCCCCccHHHH----------HHHHHHHHHHHHHHcCCCCC
Confidence 357889999999999777664 44444442 11111000000000 00011347788999999999
Q ss_pred CCeeHHhhhccc
Q psy4132 385 SPIYLKTYSSGV 396 (473)
Q Consensus 385 g~Is~~EF~~~~ 396 (473)
|.|+++||+..+
T Consensus 87 G~Is~~EF~~~~ 98 (103)
T 1snl_A 87 RLVTLEEFLAST 98 (103)
T ss_dssp SEEEHHHHHHHH
T ss_pred CcCCHHHHHHHH
Confidence 999999998765
No 316
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=97.64 E-value=8.5e-05 Score=56.21 Aligned_cols=60 Identities=13% Similarity=0.144 Sum_probs=46.0
Q ss_pred CCcHHHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhc-cC-
Q psy4132 305 GDRESKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALD-KL- 382 (473)
Q Consensus 305 ~~~~e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D-~~- 382 (473)
....+.++.+|+.| +|++|.++. .++.. .+|++++..+++.+| .+
T Consensus 6 ~~~~eel~eAFr~f-~dg~G~It~-----------------------~eLr~---------~lt~eevd~~i~~~d~~dg 52 (75)
T 1h8b_A 6 TDTAEQVIASFRIL-ASDKPYILA-----------------------EELRR---------ELPPDQAQYCIKRMPAYSG 52 (75)
T ss_dssp CSTHHHHHHHHHHH-TTSCSSBCH-----------------------HHHHH---------HSCHHHHHHHHHHSCSCCC
T ss_pred CCCHHHHHHHHHHH-hcCCCCcCH-----------------------HHHHh---------cCCHHHHHHHHHhcCcccC
Confidence 34678999999999 998844444 33322 188999999999999 56
Q ss_pred ---CCCCeeHHhhhccce
Q psy4132 383 ---PDSPIYLKTYSSGVK 397 (473)
Q Consensus 383 ---~dg~Is~~EF~~~~~ 397 (473)
++|.|+|++|+..+.
T Consensus 53 ~~~~dG~idY~eF~~~m~ 70 (75)
T 1h8b_A 53 PGSVPGALDYAAFSSALY 70 (75)
T ss_dssp SSCCTTCBCHHHHHHHHT
T ss_pred CCCCCCcCcHHHHHHHHh
Confidence 589999999987653
No 317
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=97.62 E-value=6.3e-05 Score=59.89 Aligned_cols=61 Identities=16% Similarity=0.294 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHhhh-h-----hhhHHHHHHH-----HhhhhhhhhhhhhcccccccccCCCCCceeHHHHHHHHc
Q psy4132 163 KETSSNINNAFKDLN-Q-----LMSMAKEMVE-----ISKNISNKIINRQGEITEDDSNKDRDGKINFQEFCSIVG 227 (473)
Q Consensus 163 ~~~~~~l~eaF~~lD-~-----~~e~~~~l~~-----lg~~~~~~~~~~~~~~~~~~~D~d~dG~I~f~EF~~~~~ 227 (473)
+....++++||+.|| + ..++...|+. +|..++.. ++..++.. +|.|+||.|+|+||+.+|.
T Consensus 5 ~~~~~~l~~~F~~fD~~dg~Is~~El~~~l~~~~~~~lg~~~~~~--ev~~l~~~--~D~d~dG~I~f~EF~~~~~ 76 (96)
T 1a4p_A 5 EHAMETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPL--AVDKIMKD--LDQCRDGKVGFQSFFSLIA 76 (96)
T ss_dssp HHHHHHHHHHHHHHHGGGCSBCHHHHHHHHHHHCHHHHHHSCCTT--HHHHHHHH--HCTTSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCeECHHHHHHHHHHHcccccccccCHH--HHHHHHHH--hCCCCCCcCcHHHHHHHHH
Confidence 344567999999999 3 6777777776 55555655 55666654 8999999999999999887
No 318
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=97.39 E-value=0.00026 Score=58.65 Aligned_cols=62 Identities=13% Similarity=-0.004 Sum_probs=46.0
Q ss_pred HHHHHHhHHhcCCCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCee
Q psy4132 309 SKLKFAFRIYDIDNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPIY 388 (473)
Q Consensus 309 e~l~~~F~~~D~d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~Is 388 (473)
.+.+.+|+.+|+ ++|.++. +++..++ .+. .++.+++.++++..|.|+||.|+
T Consensus 33 ~~y~~iF~~lD~-~dG~Isg---~elr~~~--------------------~~s----gLp~~~L~~Iw~laD~d~dG~Ld 84 (121)
T 3fia_A 33 AKHDQQFHSLKP-ISGFITG---DQARNFF--------------------FQS----GLPQPVLAQIWALADMNNDGRMD 84 (121)
T ss_dssp HHHHHHHHHTCC-BTTBEEH---HHHHHHH--------------------GGG----CCCHHHHHHHHHHHCTTCSSEEC
T ss_pred HHHHHHHHHhCC-CCCeECH---HHHHHHH--------------------HHc----CCCHHHHHHHHHHHcCCCCCcCC
Confidence 567788999987 6644444 3333333 332 27899999999999999999999
Q ss_pred HHhhhcccee
Q psy4132 389 LKTYSSGVKV 398 (473)
Q Consensus 389 ~~EF~~~~~v 398 (473)
++||..++..
T Consensus 85 ~~EF~~aM~L 94 (121)
T 3fia_A 85 QVEFSIAMKL 94 (121)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999877653
No 319
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=97.28 E-value=0.00024 Score=65.88 Aligned_cols=63 Identities=21% Similarity=0.195 Sum_probs=52.1
Q ss_pred HHHHHHHHHhhCC-CCCCCccHHHHhcchhcc--CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 239 IRRLGKRFRKLDL-DNSGALSIDEFMSLPELQ--QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 239 ~~~l~~~F~~~D~-d~~G~Is~~el~~l~~~~--~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
...+...|..+|. |+||+|+..||..+.... ...-+..+|+..|.|+||.|+++||...+...
T Consensus 154 ~~~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~~~ 219 (229)
T 1nub_A 154 IFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIK 219 (229)
T ss_dssp HHHHHHHHHHHTTTTCSSEECTTTTGGGGSTTSTTGGGHHHHHHHHCTTCSSCEEHHHHHHHTTCC
T ss_pred hHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHcCCCCCCcCCHHHHHHHhCCC
Confidence 3456789999999 899999999999976432 22347899999999999999999999887543
No 320
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3
Probab=97.11 E-value=0.00012 Score=62.74 Aligned_cols=63 Identities=11% Similarity=-0.043 Sum_probs=44.2
Q ss_pred HHHHHHhHHhcCC-CCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 309 SKLKFAFRIYDID-NDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 309 e~l~~~F~~~D~d-~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
..+..+|..||.| +||.+...|+.. ++..+. ....-+..+|+.+|.|+||.|
T Consensus 77 ~~l~W~F~~lD~n~~DG~Isr~EL~~---i~~~l~------------------------~~e~cv~~ff~~cD~d~Dg~I 129 (151)
T 1sra_A 77 FPVHWQFGQLDQHPIDGYLSHTELAP---LRAPLI------------------------PMEHCTTRFFETCDLDNDKYI 129 (151)
T ss_dssp HHHHHHHHHHCCTTCSSEECTTTTGG---GGSTTS------------------------TTGGGHHHHHHHHCTTCSSSE
T ss_pred hHHHhHHHHHCCCCCCCcCcHHHHHH---HHHHhc------------------------ChHHHHHHHHHHhCCCCCCcC
Confidence 4678899999997 886666643333 322110 112236788999999999999
Q ss_pred eHHhhhcccee
Q psy4132 388 YLKTYSSGVKV 398 (473)
Q Consensus 388 s~~EF~~~~~v 398 (473)
|++||...+.+
T Consensus 130 Sl~Ew~~Clg~ 140 (151)
T 1sra_A 130 ALDEWAGCFGI 140 (151)
T ss_dssp EHHHHHHHTTC
T ss_pred CHHHHHHHhCC
Confidence 99999987754
No 321
>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=97.03 E-value=0.0002 Score=59.03 Aligned_cols=90 Identities=17% Similarity=0.227 Sum_probs=59.4
Q ss_pred CceeHHHHHHHHccccccccchHHHHHHHHHHHhhC-----CCCCCCccHHHHhcchhc----c--CCHHHHHHHHHhcC
Q psy4132 215 GKINFQEFCSIVGNTDIHKKMVVDIRRLGKRFRKLD-----LDNSGALSIDEFMSLPEL----Q--QNPLVQRVIDIFDE 283 (473)
Q Consensus 215 G~I~f~EF~~~~~~~~~~~~~~~~~~~l~~~F~~~D-----~d~~G~Is~~el~~l~~~----~--~~~~~~~l~~~~D~ 283 (473)
++++-++|..+.... .-...++..+.+-|. | ...+|.|+.++|+.+... + ....+..+|+.||.
T Consensus 6 s~lspe~l~~L~~~t---~fs~~elk~~y~~F~--~g~~~k~cp~G~i~~e~F~~i~~~ffp~~~~p~~~~~~lF~~Fd~ 80 (118)
T 1tuz_A 6 GLISPSDFAQLQKYM---EYSTKKVSDVLKLFE--DGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFET 80 (118)
T ss_dssp SCSCHHHHHHHHHHH---HHCCCCHHHHHHHHH--TSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCC
T ss_pred CcCCHHHHHHHHHHc---ccCHHHHHHHHHHHc--cccccccCCCCCCCHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhc
Confidence 345556665544311 123446666777775 3 456899999999996322 2 23357889999998
Q ss_pred CC--------CCcccHHHHHHHHhhcccCCCcHHH
Q psy4132 284 DR--------NGEVDFKEFIQGVSQFSVKGDRESK 310 (473)
Q Consensus 284 d~--------dG~I~~~EF~~~l~~~~~~~~~~e~ 310 (473)
|+ +|.|+|.||+.+++.+ ..+.++++
T Consensus 81 ~~~~~~~~~~~g~I~fkefi~~LSll-~rG~~edK 114 (118)
T 1tuz_A 81 GHCLNETNVTKDVVCLNDVSCYFSLL-EGGRPEDK 114 (118)
T ss_dssp CCCTTCCCCCSCCEEHHHHHHHHHHH-HSCCCSCC
T ss_pred ccccccccCCCCeEeHHHHHHHHHHh-cCCCHHHh
Confidence 75 8999999999999887 34444443
No 322
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=96.97 E-value=0.00087 Score=69.28 Aligned_cols=99 Identities=14% Similarity=0.119 Sum_probs=67.5
Q ss_pred CCCCCCCCceEEeecceeeecCCCCCcccCcEEEeeeeeeeeec-----CccccccchhhhhHHHhhhhcccc-cCcccE
Q psy4132 8 SFELSPDESPVLKHSNVRLYDGENKSQFQRGELILTSHRLFWQK-----DITLCLALSYIQNAVEEAKSMFNL-TAGRKI 81 (473)
Q Consensus 8 ~~~l~~~E~~~~~~~~v~ly~g~~~~~~~~G~l~LTshRii~~~-----~~~~~l~l~~v~~~~~~~~~~~~~-~~s~ki 81 (473)
.+.|-|||.++...++|.+...- .+...|+|+||+|||||.+ ...+.+||..|.+++...+ .-+. ..+-.|
T Consensus 6 ~~~lLpGE~i~~~~~~V~~~~~~--~~~~~GtL~lTn~rLiF~~~~~~~~~~~~iPL~~I~~vek~~~-~s~~~~~~~~l 82 (528)
T 1zsq_A 6 EPPLLPGENIKDMAKDVTYICPF--TGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGG-ASSRGENSYGL 82 (528)
T ss_dssp CCCCCTTCCEEEEEEEEEEEETT--TEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECC-TTCCSTTCSEE
T ss_pred CCccCCCCeEEEecCCEEEeCCC--CCceeEEEEEECCEEEEEccCCCccEEEEeeccceEEEEEcCC-CCcCCCCCceE
Confidence 45689999999999999965322 2458999999999999992 2358999999999976432 1000 122357
Q ss_pred EEEeecCCCCCCCCCCCCCCCCeEEEeccCCC--chHHHHHHHH
Q psy4132 82 ILYLSKAVPGKNLGPSATSAYDYVKLSFREGI--QNEFLDALKS 123 (473)
Q Consensus 82 ~~~l~~~~~~~~~~p~~~~~~~~iklsFr~gg--~~~F~~~l~~ 123 (473)
.++.+ ....+++.|+..+ ....+..|..
T Consensus 83 ~I~CK--------------Dfr~~~f~f~~~~~~~~~v~~~L~~ 112 (528)
T 1zsq_A 83 ETVCK--------------DIRNLRFAHKPEGRTRRSIFENLMK 112 (528)
T ss_dssp EEEET--------------TTEEEEEECCGGGCCHHHHHHHHHH
T ss_pred EEEcc--------------CCeEEEEEecCchHHHHHHHHHHHH
Confidence 77776 3457788887553 2345555544
No 323
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=96.86 E-value=0.0011 Score=69.76 Aligned_cols=99 Identities=14% Similarity=0.119 Sum_probs=67.6
Q ss_pred CCCCCCCCceEEeecceeeecCCCCCcccCcEEEeeeeeeeeec-----CccccccchhhhhHHHhhhhcccc-cCcccE
Q psy4132 8 SFELSPDESPVLKHSNVRLYDGENKSQFQRGELILTSHRLFWQK-----DITLCLALSYIQNAVEEAKSMFNL-TAGRKI 81 (473)
Q Consensus 8 ~~~l~~~E~~~~~~~~v~ly~g~~~~~~~~G~l~LTshRii~~~-----~~~~~l~l~~v~~~~~~~~~~~~~-~~s~ki 81 (473)
.+.|-|||.++...++|.+.... .+...|+|+||+|||||.+ ...+.|||..|.+++...+ .-+. ..+-.|
T Consensus 78 ~~~LLPGE~v~~~~~~V~~~~p~--~~~~~GtL~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Iekv~g-~s~~g~~~~~l 154 (657)
T 1lw3_A 78 EPPLLPGENIKDMAKDVTYICPF--TGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGG-ASSRGENSYGL 154 (657)
T ss_dssp CCCCCTTCCEEEEEEEEEEEETT--TEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECC-TTCCSTTCSEE
T ss_pred CCccCCCeeEEEEeCCEEEecCC--CCceeEEEEEECCEEEEEecCCCcceEEEecccceEEEEecCC-CcccCCCCceE
Confidence 45689999999999999754322 2357899999999999992 2357999999999976431 1000 123357
Q ss_pred EEEeecCCCCCCCCCCCCCCCCeEEEeccCCC--chHHHHHHHH
Q psy4132 82 ILYLSKAVPGKNLGPSATSAYDYVKLSFREGI--QNEFLDALKS 123 (473)
Q Consensus 82 ~~~l~~~~~~~~~~p~~~~~~~~iklsFr~gg--~~~F~~~l~~ 123 (473)
.++.+ ....+++.|+..+ ....+..|..
T Consensus 155 ~I~CK--------------DfR~~~f~f~~~~~~~~~v~~~L~~ 184 (657)
T 1lw3_A 155 ETVCK--------------DIRNLRFAHKPEGRTRRSIFENLMK 184 (657)
T ss_dssp EEEET--------------TTEEEEEECCGGGCCHHHHHHHHHH
T ss_pred EEEec--------------CCcEEEEEeCCccchHHHHHHHHHH
Confidence 77776 3467888887553 2455565554
No 324
>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=96.77 E-value=0.003 Score=51.89 Aligned_cols=94 Identities=15% Similarity=0.208 Sum_probs=66.6
Q ss_pred CCCCccHHHHhcchhc--cCCHHHHHHHHHh-c-----CCCCCcccHHHHHHHHhhcccCC-CcHHHHHHHhHHhcCCCC
Q psy4132 253 NSGALSIDEFMSLPEL--QQNPLVQRVIDIF-D-----EDRNGEVDFKEFIQGVSQFSVKG-DRESKLKFAFRIYDIDND 323 (473)
Q Consensus 253 ~~G~Is~~el~~l~~~--~~~~~~~~l~~~~-D-----~d~dG~I~~~EF~~~l~~~~~~~-~~~e~l~~~F~~~D~d~d 323 (473)
..+.+++++|..+... -....++.+++.| | ...+|.|++++|..++..+...+ .+..-...+|+.||.|++
T Consensus 4 ~~s~lspe~l~~L~~~t~fs~~elk~~y~~F~~g~~~k~cp~G~i~~e~F~~i~~~ffp~~~~p~~~~~~lF~~Fd~~~~ 83 (118)
T 1tuz_A 4 ERGLISPSDFAQLQKYMEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHC 83 (118)
T ss_dssp CCSCSCHHHHHHHHHHHHHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCC
T ss_pred ccCcCCHHHHHHHHHHcccCHHHHHHHHHHHccccccccCCCCCCCHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhcccc
Confidence 4557889998887432 3455677888888 2 45689999999999999987776 888888889999998763
Q ss_pred chhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhh
Q psy4132 324 DDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRA 361 (473)
Q Consensus 324 g~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~ 361 (473)
.... ...+|.|++.|+.|++.-.
T Consensus 84 ~~~~---------------~~~~g~I~fkefi~~LSll 106 (118)
T 1tuz_A 84 LNET---------------NVTKDVVCLNDVSCYFSLL 106 (118)
T ss_dssp TTCC---------------CCCSCCEEHHHHHHHHHHH
T ss_pred cccc---------------cCCCCeEeHHHHHHHHHHh
Confidence 1000 0123667777777766653
No 325
>3hsa_A Pleckstrin homology domain; YP_926556.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE MLY; 1.99A {Shewanella amazonensis SB2B} SCOP: b.55.1.13 PDB: 3dcx_A*
Probab=96.48 E-value=0.0026 Score=52.48 Aligned_cols=91 Identities=18% Similarity=0.166 Sum_probs=68.6
Q ss_pred CCCCCCCCceEEeecceeeecCCCCCcccCcEEEeeeeeeeee------cCc--cccccchhhhhHHHhhhhcccccCcc
Q psy4132 8 SFELSPDESPVLKHSNVRLYDGENKSQFQRGELILTSHRLFWQ------KDI--TLCLALSYIQNAVEEAKSMFNLTAGR 79 (473)
Q Consensus 8 ~~~l~~~E~~~~~~~~v~ly~g~~~~~~~~G~l~LTshRii~~------~~~--~~~l~l~~v~~~~~~~~~~~~~~~s~ 79 (473)
.+.|.|||.+...-.-| .+.+..|++|||.+ ++. -.++|.+.|.++..+.+|.| -..+
T Consensus 25 ~~~L~~gE~I~~ayk~i------------RD~~iFTnkRLI~vD~QG~TGkK~~~~siPY~sI~~~siETAG~f--DlDa 90 (126)
T 3hsa_A 25 SPILGDNEELQLAYXMV------------RDLFVFTSXRLILIDXQGVTGXXVSYHSIPYXAIVHFQVETAGTF--DMDA 90 (126)
T ss_dssp GGGSCTTCCEEEEEECS------------SEEEEEESSEEEEEEEESTTSCEEEEEEEEGGGEEEEEEEEESTT--SCEE
T ss_pred HHhcCCCCEEEEEehhc------------CceEEEccchheEEecCcCcccceEEEEeccceeeEEEEeccccc--cCCc
Confidence 56688999988765443 38899999999999 222 35999999999988877874 5678
Q ss_pred cEEEEeecCCCCCCCCCCCCCCCCeEEEeccCCC-chHHHHHHHHHH
Q psy4132 80 KIILYLSKAVPGKNLGPSATSAYDYVKLSFREGI-QNEFLDALKSTV 125 (473)
Q Consensus 80 ki~~~l~~~~~~~~~~p~~~~~~~~iklsFr~gg-~~~F~~~l~~~l 125 (473)
.|+++++.. ..-+++-|+++- -.++++.|...+
T Consensus 91 Elki~isg~-------------~~pi~~~f~k~~di~~i~k~La~~v 124 (126)
T 3hsa_A 91 ELXLWISGQ-------------HEPLVXELXRGTDVVGIQXTIARYA 124 (126)
T ss_dssp EEEEEETTC-------------SSCEEEEECTTSCHHHHHHHHHHHH
T ss_pred eEEEEEcCC-------------ceEEEEeccCcccHHHHHHHHHHHh
Confidence 899998521 112899999874 578888887654
No 326
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=96.30 E-value=0.0043 Score=46.93 Aligned_cols=59 Identities=19% Similarity=0.119 Sum_probs=48.1
Q ss_pred HHHHHHHHHhhC------CCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcccccccccc
Q psy4132 409 FVEKTYEIVSQN------VFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYENK 467 (473)
Q Consensus 409 ~~~~~~~~~~~~------~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~n~ 467 (473)
....|++++... +..|..|||+.+++|..-++..|...|+.|+|.|+-+..|.+.++-.
T Consensus 5 r~~~IL~~I~~~i~~~~g~~psv~EIa~~lgvS~~TVrr~L~~Le~kG~I~R~~ggr~~~~~~~~ 69 (77)
T 2jt1_A 5 IVTKIISIVQERQNMDDGAPVKTRDIADAAGLSIYQVRLYLEQLHDVGVLEKVNAGKGVPGLWRL 69 (77)
T ss_dssp HHHHHHHHHHHHHHHHTTSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEESCSSSSCCEEEE
T ss_pred HHHHHHHHHHHHHhhccCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCcEEecCCCCCcHHHHHH
Confidence 344555555444 78999999999999999999999999999999999877776665543
No 327
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=95.95 E-value=0.011 Score=44.69 Aligned_cols=47 Identities=15% Similarity=0.101 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCcccc
Q psy4132 409 FVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRD 455 (473)
Q Consensus 409 ~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d 455 (473)
++..|.+++...+.++..|+|+.|++|...++..|...|++|.|.|-
T Consensus 3 ~L~~Il~~L~~~g~vsv~eLa~~l~VS~~TIRrdL~~Le~~G~l~R~ 49 (78)
T 1xn7_A 3 SLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRI 49 (78)
T ss_dssp CHHHHHHHHHHSCSBCHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEE
T ss_pred hHHHHHHHHHHcCCCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEe
Confidence 36788999999999999999999999999999999999999999886
No 328
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=95.91 E-value=0.024 Score=45.32 Aligned_cols=76 Identities=24% Similarity=0.271 Sum_probs=53.6
Q ss_pred CCCceEEeecceeeecCCCCCcccCcEEEeeeeeeeee----cCccccccchhhhhHHHhhhhcccccCcccEEEEeecC
Q psy4132 13 PDESPVLKHSNVRLYDGENKSQFQRGELILTSHRLFWQ----KDITLCLALSYIQNAVEEAKSMFNLTAGRKIILYLSKA 88 (473)
Q Consensus 13 ~~E~~~~~~~~v~ly~g~~~~~~~~G~l~LTshRii~~----~~~~~~l~l~~v~~~~~~~~~~~~~~~s~ki~~~l~~~ 88 (473)
..|.+++...+|.. ..++|+||||+-||.|. +...+++++..|.+..... -.++||-|+|--.
T Consensus 4 ~~~~~ll~v~~v~y-------KK~dGtL~l~~d~i~W~p~~~~~~~vs~~~~~I~~qq~SP------~~k~KVqLqi~l~ 70 (108)
T 1pfj_A 4 SSEEVLLIVKKVRQ-------KKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISP------EGKAKIQLQLVLH 70 (108)
T ss_dssp SSCCEEEEESCCBC-------SSCBCEEEEETTEEEEECSSSSSCSEEEETTTCCCEEECC------SSSSSCEEEEECS
T ss_pred cchheeEEehhhee-------ecCCceEEEEcceEEEccCCCCCceEEEehhhhhcceeCC------CCCccEEEEEEEe
Confidence 45677777777654 35669999999999999 4566788888888764333 3788998888532
Q ss_pred CCCCCCCCCCCCCCCeEEEeccCCC
Q psy4132 89 VPGKNLGPSATSAYDYVKLSFREGI 113 (473)
Q Consensus 89 ~~~~~~~p~~~~~~~~iklsFr~gg 113 (473)
+ +.-..|.|-...
T Consensus 71 ~------------~~~~~F~Ftn~~ 83 (108)
T 1pfj_A 71 A------------GDTTNFHFSNES 83 (108)
T ss_dssp S------------SCEEEEECCCSS
T ss_pred C------------CCceEEEEcCcH
Confidence 1 123467777654
No 329
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=95.63 E-value=0.011 Score=45.62 Aligned_cols=46 Identities=15% Similarity=0.122 Sum_probs=43.6
Q ss_pred HHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCcccc
Q psy4132 410 VEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRD 455 (473)
Q Consensus 410 ~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d 455 (473)
+..|.+++...+.++..|+|+.|++|...++..|...+++|.|.|-
T Consensus 4 L~~Il~~L~~~g~vsv~eLA~~l~VS~~TIRrDL~~Le~~G~l~R~ 49 (87)
T 2k02_A 4 LMEVRDMLALQGRMEAKQLSARLQTPQPLIDAMLERMEAMGKVVRI 49 (87)
T ss_dssp THHHHHHHHHSCSEEHHHHHHHTTCCHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEE
Confidence 5678899999999999999999999999999999999999999986
No 330
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=95.55 E-value=0.0036 Score=57.93 Aligned_cols=65 Identities=18% Similarity=0.040 Sum_probs=44.0
Q ss_pred HHHHHHhHHhcC-CCCchhhHhhHHHHHHHHhchhhcCCCccchhHHHHHHHhhhCCCCCCHHHHHHHHHHhccCCCCCe
Q psy4132 309 SKLKFAFRIYDI-DNDDDYYQALGNELIAALIEPLTSAGGTMLLTDAYCRINRARGLELLSPEDLLNSCLALDKLPDSPI 387 (473)
Q Consensus 309 e~l~~~F~~~D~-d~dg~~~~~e~~el~~~L~~~~~~~~g~i~l~d~~~~~~~~~g~~~ls~~ei~~~~~~~D~~~dg~I 387 (473)
..+.+.|..||. |+||.+...|+..|...|. ....=+..+|+..|.|+||.|
T Consensus 155 ~~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~---------------------------~~~~c~~~~~~~cD~n~D~~i 207 (229)
T 1nub_A 155 FPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI---------------------------PMEHCTTRFFETCDLDNDKYI 207 (229)
T ss_dssp HHHHHHHHHHTTTTCSSEECTTTTGGGGSTTS---------------------------TTGGGHHHHHHHHCTTCSSCE
T ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh---------------------------hHHHHHHHHHHHcCCCCCCcC
Confidence 356778999998 7886666643333331110 011125678999999999999
Q ss_pred eHHhhhccceeee
Q psy4132 388 YLKTYSSGVKVLQ 400 (473)
Q Consensus 388 s~~EF~~~~~vl~ 400 (473)
|++||...+.+..
T Consensus 208 s~~Ew~~cf~~~~ 220 (229)
T 1nub_A 208 ALDEWAGCFGIKQ 220 (229)
T ss_dssp EHHHHHHHTTCCG
T ss_pred CHHHHHHHhCCCc
Confidence 9999998877543
No 331
>1zyi_A Methylosome subunit picln; PH domain, cell volume regulation, RNA splicing, translation; NMR {Canis lupus familiaris}
Probab=95.54 E-value=0.0054 Score=53.62 Aligned_cols=54 Identities=17% Similarity=0.210 Sum_probs=33.4
Q ss_pred CCCCCCC--CceEEeecceeeecCCCCCcccCcEEEeeeeeeeee--cCccccccchhhh
Q psy4132 8 SFELSPD--ESPVLKHSNVRLYDGENKSQFQRGELILTSHRLFWQ--KDITLCLALSYIQ 63 (473)
Q Consensus 8 ~~~l~~~--E~~~~~~~~v~ly~g~~~~~~~~G~l~LTshRii~~--~~~~~~l~l~~v~ 63 (473)
++..-|. |.+++.+.+|.++-|+.-. ..|+||+|+-||+|. ....++||...|.
T Consensus 14 ~~~~~p~~~E~v~~~~~~v~~vl~~~~~--g~GtLyVt~~~l~W~~~~~~G~sI~YpsIs 71 (171)
T 1zyi_A 14 KSFPPPGSAEGLRQQQPETEAVLNGKGL--GTGTLYIAESRLSWLDGSGLGFSLEYPTIS 71 (171)
T ss_dssp -------------CBCSSEEEEBTTBCC--CEEEEEEETTEEEEEETTTEEEEESSCCCS
T ss_pred ccCCCCCCccceEEEcCCEEEEECCCcc--CceEEEEEcCEEEEEcCCCcEEEeecCeEE
Confidence 3444577 9999999999999987543 579999999999999 3444555554443
No 332
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=94.69 E-value=0.072 Score=40.29 Aligned_cols=55 Identities=16% Similarity=0.155 Sum_probs=44.7
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc--cccccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE--GLRFYE 465 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~--g~~~~~ 465 (473)
..++.++...+.+|..|+|+.+++|..-+...|...++.|+|.+..... |.+|..
T Consensus 3 ~~Il~~L~~~~~~s~~eLa~~lgvs~~tv~r~L~~L~~~GlI~~~~~~~gr~~~y~l 59 (81)
T 2htj_A 3 NEILEFLNRHNGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWFL 59 (81)
T ss_dssp HHHHHHHHHSCCCCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEEECCSSSSSCEEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeccCCCCcEEEEE
Confidence 4567777777889999999999999999999999999999999654333 344443
No 333
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=94.66 E-value=0.064 Score=40.83 Aligned_cols=57 Identities=11% Similarity=0.034 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhCC---CCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcccccccc
Q psy4132 408 SFVEKTYEIVSQNV---FVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYE 465 (473)
Q Consensus 408 ~~~~~~~~~~~~~~---~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~ 465 (473)
..-.+|+.++..++ .+|+.++|+.+++|-.-.+..|...++.|.|++-++-- -+|+.
T Consensus 10 ~~~~~IL~~L~~~~pg~~~t~~eLA~~Lgvsr~tV~~~L~~Le~~G~I~~~g~~~-~~W~i 69 (81)
T 1qbj_A 10 DQEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTP-PLWKI 69 (81)
T ss_dssp HHHHHHHHHHHHHCTTCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEESSSS-CEEEE
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEecCCCC-CeeEE
Confidence 34467788888888 89999999999999999999999999999999865332 44443
No 334
>1oyi_A Double-stranded RNA-binding protein; (alpha+beta) helix-turn-helix, viral protein; NMR {Vaccinia virus} SCOP: a.4.5.19
Probab=94.23 E-value=0.073 Score=40.44 Aligned_cols=60 Identities=12% Similarity=0.101 Sum_probs=49.8
Q ss_pred CcHHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCccccccccc
Q psy4132 405 EDASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYEN 466 (473)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~n 466 (473)
+..+...+|+.++..++ +|+.|+|+.+|+|-.-++.+|...|..|.|++- +..=.+||.+
T Consensus 14 ~~~~~~~~IL~lL~~~g-~sa~eLAk~LgiSk~aVr~~L~~Le~eG~I~~~-~~~PP~W~~~ 73 (82)
T 1oyi_A 14 SNAEIVCEAIKTIGIEG-ATAAQLTRQLNMEKREVNKALYDLQRSAMVYSS-DDIPPRWFMT 73 (82)
T ss_dssp CSHHHHHHHHHHHSSST-EEHHHHHHHSSSCHHHHHHHHHHHHHHTSSEEC-SSSSCEEESC
T ss_pred chHHHHHHHHHHHHHcC-CCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeC-CCCCCcceec
Confidence 34578899999998776 999999999999999999999999999999984 2222556554
No 335
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=94.17 E-value=0.049 Score=41.22 Aligned_cols=50 Identities=14% Similarity=0.102 Sum_probs=46.2
Q ss_pred cHHHHHHHHHHHhhCCCCCHHHHHHhhCCcHH-HHHHHHHHHHHcCCcccc
Q psy4132 406 DASFVEKTYEIVSQNVFVTVEQFSRLASVSLV-IAKHRLLLAETHGKLCRD 455 (473)
Q Consensus 406 ~~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~-~~~~~l~~~~~~g~l~~d 455 (473)
..+...+|+.++...+++|+.+||+.++++.. -++..|...|..|+|++-
T Consensus 9 ~~~~~~~IL~~Lk~~g~~ta~eiA~~Lgit~~~aVr~hL~~Le~eGlV~~~ 59 (79)
T 1xmk_A 9 MAEIKEKICDYLFNVSDSSALNLAKNIGLTKARDINAVLIDMERQGDVYRQ 59 (79)
T ss_dssp HHHHHHHHHHHHHHTCCEEHHHHHHHHCGGGHHHHHHHHHHHHHTTSEEEE
T ss_pred chhHHHHHHHHHHHcCCcCHHHHHHHcCCCcHHHHHHHHHHHHHCCCEEec
Confidence 35778899999999999999999999999999 999999999999999964
No 336
>1y5o_A TFB1, RNA polymerase II transcription factor B 73 kDa subunit; TFIIH, PH domain, phosphoinositides, VP16; NMR {Saccharomyces cerevisiae} SCOP: b.55.1.9 PDB: 2gs0_A 2k2u_A 2l2i_A 2lox_A*
Probab=94.13 E-value=0.14 Score=41.11 Aligned_cols=83 Identities=23% Similarity=0.324 Sum_probs=57.0
Q ss_pred ccCcEEEeeee----eeeee---cCccccccchhhhhHHHhhhhcccccCcccEEEEeecCCC-CC----CCCCCCCCCC
Q psy4132 35 FQRGELILTSH----RLFWQ---KDITLCLALSYIQNAVEEAKSMFNLTAGRKIILYLSKAVP-GK----NLGPSATSAY 102 (473)
Q Consensus 35 ~~~G~l~LTsh----Rii~~---~~~~~~l~l~~v~~~~~~~~~~~~~~~s~ki~~~l~~~~~-~~----~~~p~~~~~~ 102 (473)
.++|.|.++.- -|.|. +...++|||..|.++.-.. -.|||+.|.|-..+. ++ +.|+......
T Consensus 11 Kk~G~lti~eD~~p~~l~W~p~~g~~~isI~l~~It~LQqTp------~ts~KvmLKI~~k~~~~~~~~~~~~~~~~~~p 84 (115)
T 1y5o_A 11 KVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATP------ASSEKMMLRLIGKVDESKKRKDNEGNEVVPKP 84 (115)
T ss_dssp SCEEEEEEECSSSSCEEEEEESSSSCEEEEESTTCSEEEECC------TTCSSEEEEEEECSCCSSSCCCCSSCCSSCCC
T ss_pred ecccEEEEccCCCcceEEEEECCCCccEEEEhhhhhhhhcCC------CCCCceEEEEEEeccccccccCCCcCCCCCCc
Confidence 58999999998 89999 7788999999999975433 489999999964431 00 1122222344
Q ss_pred CeEEEeccCCCchHHHHHHHHHHh
Q psy4132 103 DYVKLSFREGIQNEFLDALKSTVD 126 (473)
Q Consensus 103 ~~iklsFr~gg~~~F~~~l~~~l~ 126 (473)
....|+|-. ..--.+++++|+
T Consensus 85 ~~~~F~Ftn---R~~~d~IKd~Lq 105 (115)
T 1y5o_A 85 QRHMFSFNN---RTVMDNIKMTLQ 105 (115)
T ss_dssp EEEEEEESC---HHHHHHHHHHHH
T ss_pred ceEEEEeCC---HHHHHHHHHHHH
Confidence 567789987 444445555553
No 337
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=94.13 E-value=0.049 Score=41.03 Aligned_cols=54 Identities=11% Similarity=0.065 Sum_probs=45.9
Q ss_pred HHHHHHHHhhCC---CCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCccccccc
Q psy4132 410 VEKTYEIVSQNV---FVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFY 464 (473)
Q Consensus 410 ~~~~~~~~~~~~---~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~ 464 (473)
-..|+.++..++ ++|+.|+|+.+++|..-.+..|...++.|.|++-++-- -+|+
T Consensus 16 ~~~IL~~L~~~~~~~~~t~~eLA~~Lgvs~~tV~~~L~~L~~~G~I~~~g~~~-~~W~ 72 (77)
T 1qgp_A 16 EQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTP-PLWK 72 (77)
T ss_dssp HHHHHHHHHHHCSSSCEEHHHHHHHHCCCHHHHHHHHHHHHHHTSEEEECSSS-CEEE
T ss_pred HHHHHHHHHHcCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEecCCCC-CceE
Confidence 366788888888 99999999999999999999999999999999976432 3444
No 338
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=93.19 E-value=0.058 Score=55.43 Aligned_cols=77 Identities=18% Similarity=0.213 Sum_probs=51.6
Q ss_pred EEeecceeeecCCC-CCcccCcEEEeeeeeeeee--cCccccccchhhhhHHHhhhhcccccCcccEEEEeecCCCCCCC
Q psy4132 18 VLKHSNVRLYDGEN-KSQFQRGELILTSHRLFWQ--KDITLCLALSYIQNAVEEAKSMFNLTAGRKIILYLSKAVPGKNL 94 (473)
Q Consensus 18 ~~~~~~v~ly~g~~-~~~~~~G~l~LTshRii~~--~~~~~~l~l~~v~~~~~~~~~~~~~~~s~ki~~~l~~~~~~~~~ 94 (473)
+-..+||.|++.-. ..+-..|+|+||+|||||. ...-+-||+..|..++... .. .+...|.++.+
T Consensus 6 ~~~v~~V~l~~~~~~~~~~~~GtL~lTn~~LiF~~~~~~e~wi~~~~I~~VeK~~-~~---~~~~~l~I~CK-------- 73 (512)
T 2yf0_A 6 TTKVEQVKLLDRFSTSNKSLTGTLYLTATHLLFIDSHQKETWILHHHIASVEKLA-LT---TSGCPLVIQCK-------- 73 (512)
T ss_dssp EEEEEECCCC--------CCEEEEEECSSEEEEEESSSCEEEEEGGGEEEEEECC-CB---TTBEEEEEEET--------
T ss_pred cCccccEEEEeccCCCCCceeEEEEEECCEEEEeCCCCCceEecccceeEEEEec-CC---CCCceEEEEec--------
Confidence 34568999987533 3457899999999999999 3445778999999987543 22 23345777776
Q ss_pred CCCCCCCCCeEEEeccCC
Q psy4132 95 GPSATSAYDYVKLSFREG 112 (473)
Q Consensus 95 ~p~~~~~~~~iklsFr~g 112 (473)
....+++.|...
T Consensus 74 ------Dfr~~~f~f~~~ 85 (512)
T 2yf0_A 74 ------NFRTVHFIVPRE 85 (512)
T ss_dssp ------TSCEEEEEESCH
T ss_pred ------CCcEEEEEeCCh
Confidence 356788888743
No 339
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=92.33 E-value=0.16 Score=38.37 Aligned_cols=54 Identities=17% Similarity=0.210 Sum_probs=46.0
Q ss_pred HHHHHHHhhC--CCCCHHHHHHhh-----CCcHHHHHHHHHHHHHcCCccccCCccccccc
Q psy4132 411 EKTYEIVSQN--VFVTVEQFSRLA-----SVSLVIAKHRLLLAETHGKLCRDQSIEGLRFY 464 (473)
Q Consensus 411 ~~~~~~~~~~--~~ls~~e~a~~~-----~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~ 464 (473)
..|++++... +++|+.|+++.+ ++|..-+...|...++.|+|.|.....|..+|
T Consensus 20 ~~IL~~l~~~~~~~~s~~el~~~l~~~~~~is~~TVyR~L~~L~~~Glv~~~~~~~~~~~y 80 (83)
T 2fu4_A 20 LKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVF 80 (83)
T ss_dssp HHHHHHHTSGGGSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEEEEECGGGCEEE
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCeEEEeeCCCceEe
Confidence 4566666554 689999999999 99999999999999999999998887776555
No 340
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=91.36 E-value=0.15 Score=41.22 Aligned_cols=46 Identities=15% Similarity=0.111 Sum_probs=42.2
Q ss_pred HHHHHHHhhCCCCCHHHHHHhh--CCcHHHHHHHHHHHHHcCCccccC
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLA--SVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~--~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
.+|+.++..++.+|+.++|..+ ++|..-+.++|...++.|+|.+-.
T Consensus 16 ~~IL~~L~~~g~~s~~eLA~~l~~giS~~aVs~rL~~Le~~GLV~~~~ 63 (111)
T 3b73_A 16 DRILEIIHEEGNGSPKELEDRDEIRISKSSVSRRLKKLADHDLLQPLA 63 (111)
T ss_dssp HHHHHHHHHHSCBCHHHHHTSTTCCSCHHHHHHHHHHHHHTTSEEECS
T ss_pred HHHHHHHHHcCCCCHHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEecC
Confidence 6778888888899999999999 999999999999999999998753
No 341
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=89.54 E-value=0.36 Score=37.41 Aligned_cols=47 Identities=11% Similarity=0.118 Sum_probs=41.0
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
..++.++...+++|..|+|+.+++|..-+...|...++.|+|.+...
T Consensus 27 ~~il~~l~~~~~~s~~ela~~l~is~~tvs~~l~~L~~~glv~~~~~ 73 (99)
T 3cuo_A 27 LLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRD 73 (99)
T ss_dssp HHHHHHHTTCCSEEHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHhCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEec
Confidence 45666666667899999999999999999999999999999988653
No 342
>3jth_A Transcription activator HLYU; transcription factor, RTXA, DNA-binding, transcription regulation; 2.00A {Vibrio vulnificus}
Probab=89.04 E-value=0.42 Score=37.20 Aligned_cols=54 Identities=7% Similarity=0.067 Sum_probs=43.6
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcccccccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYE 465 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~ 465 (473)
..++.++.. +.+|..|+|+.+++|..-....|...++.|+|.+........|..
T Consensus 26 ~~Il~~L~~-~~~~~~ela~~l~is~~tvs~~L~~L~~~Glv~~~~~g~~~~y~l 79 (98)
T 3jth_A 26 LQILCMLHN-QELSVGELCAKLQLSQSALSQHLAWLRRDGLVTTRKEAQTVYYTL 79 (98)
T ss_dssp HHHHHHTTT-SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCTTCCEEEE
T ss_pred HHHHHHHhc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeCCEEEEEE
Confidence 456666655 889999999999999999999999999999998775443344443
No 343
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=89.00 E-value=0.62 Score=36.12 Aligned_cols=50 Identities=16% Similarity=0.040 Sum_probs=41.6
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCccccccccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYEN 466 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~n 466 (473)
.+++.++ .+.+|..|+|+.+++|..-....|...++.|+|.+.. | +|..+
T Consensus 34 ~~Il~~L--~~~~~~~eLa~~l~is~~tv~~~L~~L~~~Glv~~~~---g-~y~l~ 83 (96)
T 1y0u_A 34 RKILRML--DKGRSEEEIMQTLSLSKKQLDYHLKVLEAGFCIERVG---E-RWVVT 83 (96)
T ss_dssp HHHHHHH--HTTCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET---T-EEEEC
T ss_pred HHHHHHH--cCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEC---C-EEEEC
Confidence 4556666 4679999999999999999999999999999999876 4 55444
No 344
>1p6r_A Penicillinase repressor; transcription regulation, DNA-binding, winged helix protein, bacterial resistance to antibiotics; NMR {Bacillus licheniformis} SCOP: a.4.5.39 PDB: 2p7c_B
Probab=88.89 E-value=0.35 Score=36.39 Aligned_cols=55 Identities=11% Similarity=0.059 Sum_probs=43.9
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhC----CcHHHHHHHHHHHHHcCCccccCCcccccccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLAS----VSLVIAKHRLLLAETHGKLCRDQSIEGLRFYE 465 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~----~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~ 465 (473)
..++.++...+++|..|+++.++ |+..-....|...++.|+|.|.......+|++
T Consensus 12 ~~vL~~L~~~~~~t~~ei~~~l~~~~~~s~~Tv~~~l~rL~~kGlv~r~~~gr~~~y~~ 70 (82)
T 1p6r_A 12 LEVMKVIWKHSSINTNEVIKELSKTSTWSPKTIQTMLLRLIKKGALNHHKEGRVFVYTP 70 (82)
T ss_dssp HHHHHHHHTSSSEEHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEE
T ss_pred HHHHHHHHcCCCCCHHHHHHHHhhcCCccHHHHHHHHHHHHHCCCeEEEecCCEEEEEe
Confidence 44566666678999999999996 89999999999999999999876433345544
No 345
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=88.73 E-value=0.47 Score=49.56 Aligned_cols=65 Identities=23% Similarity=0.282 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHhhCCCCCCCccHHHHhcchh-cc-CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 236 VVDIRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQ-QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 236 ~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~~-~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
..+...+..+|..+|.. +|+|+-.+.+.++. .+ ....+..++...|.+++|.++.+||+-+|+..
T Consensus 454 ~~~~~~y~~~F~~~~~~-~g~i~g~~a~~~~~~s~Lp~~~L~~IW~l~D~~~~g~L~~~eF~~am~Li 520 (550)
T 2qpt_A 454 TKDKSKYDEIFYNLAPA-DGKLSGSKAKTWMVGTKLPNSVLGRIWKLSDVDRDGMLDDEEFALASHLI 520 (550)
T ss_dssp TTTHHHHHHHHHHTCCS-SSEECHHHHHHHHHHTTCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCC-CCeecHHHHHHHHHHcCCCHHHHHHHhcccCCCCCCcCCHHHHHHHHHHH
Confidence 34678899999999965 59999999998643 22 34457899999999999999999999988654
No 346
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=88.72 E-value=0.66 Score=39.97 Aligned_cols=44 Identities=18% Similarity=0.274 Sum_probs=41.6
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
.+++..++.++++|..++|+.+|+|..-+.++|...++.|.+.|
T Consensus 6 ~~il~~L~~~~~~s~~~la~~lg~s~~tv~~rl~~L~~~g~i~~ 49 (162)
T 3i4p_A 6 RKILRILQEDSTLAVADLAKKVGLSTTPCWRRIQKMEEDGVIRR 49 (162)
T ss_dssp HHHHHHHTTCSCSCHHHHHHHHTCCHHHHHHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeee
Confidence 57888999999999999999999999999999999999999886
No 347
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=88.52 E-value=0.61 Score=33.79 Aligned_cols=45 Identities=13% Similarity=0.153 Sum_probs=39.4
Q ss_pred HHHHHHHHhhC-CCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 410 VEKTYEIVSQN-VFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 410 ~~~~~~~~~~~-~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
-.+|++++..+ ..+|..|||+.+++|-......|...++.|+|+.
T Consensus 12 ~~~IL~~L~~~~~~~s~~eLA~~lglsr~tv~~~l~~L~~~G~I~~ 57 (67)
T 2heo_A 12 EQKILQVLSDDGGPVAIFQLVKKCQVPKKTLNQVLYRLKKEDRVSS 57 (67)
T ss_dssp HHHHHHHHHHHCSCEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHcCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCcEec
Confidence 45677777665 5799999999999999999999999999999876
No 348
>1wi9_A Protein C20ORF116 homolog; helix-turn-helix motif, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.4.5.47
Probab=88.20 E-value=0.74 Score=33.69 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCcc--ccCC
Q psy4132 407 ASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLC--RDQS 457 (473)
Q Consensus 407 ~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~--~d~~ 457 (473)
...+.....++.....+..+++|..|+++...+.++|+..+..|.|. .|+.
T Consensus 6 ~~ll~~Fi~yIk~~Kvv~LedLA~~F~l~t~~~i~RI~~Le~~g~ltGViDDR 58 (72)
T 1wi9_A 6 SGFLTEFINYIKKSKVVLLEDLAFQMGLRTQDAINRIQDLLTEGTLTGVIDDR 58 (72)
T ss_dssp CCHHHHHHHHHHHCSEECHHHHHHHHCSCHHHHHHHHHHHHHHSSSCEEECTT
T ss_pred HHHHHHHHHHHHHcCeeeHHHHHHHhCCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 45677888899999999999999999999999999999999999986 5663
No 349
>1u2w_A CADC repressor, cadmium efflux system accessory protein; LEAD, SOFT metal ION resistance, ARSR/SM family, DNA binding protein; 1.90A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 3f72_A
Probab=88.01 E-value=0.58 Score=38.23 Aligned_cols=55 Identities=15% Similarity=0.061 Sum_probs=42.5
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcccccccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYE 465 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~ 465 (473)
.+++.++...+.+|..|+|+.+++|..-....|...++.|+|.+.......+|+.
T Consensus 45 l~IL~~L~~~~~~s~~eLa~~l~is~stvs~~L~~L~~~Glv~~~~~gr~~~y~l 99 (122)
T 1u2w_A 45 AKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKEGKLALYSL 99 (122)
T ss_dssp HHHHHHHHHSSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEC----CCEEEE
T ss_pred HHHHHHHHHCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEECCEEEEEE
Confidence 3566666667889999999999999999999999999999998765433344443
No 350
>1sfu_A 34L protein; protein/Z-DNA complex, DNA binding protein/DNA complex; 2.00A {Yaba-like disease virus} SCOP: a.4.5.19
Probab=87.94 E-value=1.3 Score=32.76 Aligned_cols=53 Identities=15% Similarity=0.083 Sum_probs=44.0
Q ss_pred CcHHHHHHHHHHHhh---CCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 405 EDASFVEKTYEIVSQ---NVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 405 ~~~~~~~~~~~~~~~---~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
++.++.+.+.+.+.. +...|+.+||+.+|++=.-++..|-..+..|.|+.-.+
T Consensus 9 ~~~~~~~~v~~~i~~L~~~~~~Ta~~IAkkLg~sK~~vNr~LY~L~kkG~V~~~~~ 64 (75)
T 1sfu_A 9 NDAEIFSLVKKEVLSLNTNDYTTAISLSNRLKINKKKINQQLYKLQKEDTVKMVPS 64 (75)
T ss_dssp CSHHHHHHHHHHHHTSCTTCEECHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEECC
T ss_pred chHHHHHHHHHHHHhCCCCcchHHHHHHHHHCCCHHHHHHHHHHHHHCCCEecCCC
Confidence 566777777666554 45599999999999999999999999999999987654
No 351
>1on2_A Transcriptional regulator MNTR; helix-turn-helix, DNA-binding protein, metalloregulatory protein; 1.61A {Bacillus subtilis} SCOP: a.4.5.24 a.76.1.1 PDB: 2ev0_A 1on1_A 2ev5_A 2ev6_A* 2f5c_A 2f5d_A 2f5e_A 2f5f_A 2hyf_A* 2hyg_D 3r60_A* 3r61_A*
Probab=87.39 E-value=0.89 Score=37.84 Aligned_cols=51 Identities=10% Similarity=0.197 Sum_probs=45.7
Q ss_pred cHHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 406 DASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 406 ~~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
.+.++..++.++...+++|..++|+.+++|..-+...|...+..|+|.|..
T Consensus 6 ~~~~L~~i~~l~~~~~~~~~~ela~~l~vs~~tvs~~l~~Le~~Glv~r~~ 56 (142)
T 1on2_A 6 MEMYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEK 56 (142)
T ss_dssp HHHHHHHHHHHHHHHSSCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEET
T ss_pred HHHHHHHHHHHHhhcCCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEee
Confidence 356778888888777899999999999999999999999999999999864
No 352
>3hrs_A Metalloregulator SCAR; DTXR/MNTR family member, transcription; 2.70A {Streptococcus gordonii} PDB: 3hrt_A 3hru_A
Probab=87.33 E-value=0.7 Score=41.87 Aligned_cols=52 Identities=15% Similarity=0.213 Sum_probs=48.0
Q ss_pred CcHHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 405 EDASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
+.+++++.++.+....+.++..++|+.++++..-+.+.|...+++|+|.|..
T Consensus 3 ~~edYL~~I~~l~~~~~~~~~~~lA~~l~vs~~tvs~~l~~Le~~GlV~r~~ 54 (214)
T 3hrs_A 3 NKEDYLKCLYELGTRHNKITNKEIAQLMQVSPPAVTEMMKKLLAEELLIKDK 54 (214)
T ss_dssp CHHHHHHHHHHTTSSCSCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET
T ss_pred hHHHHHHHHHHHHhcCCCcCHHHHHHHHCCChhHHHHHHHHHHHCCCEEEec
Confidence 4578999999988888899999999999999999999999999999999875
No 353
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=87.27 E-value=0.91 Score=38.14 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=41.1
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
..++.+++.++.+|..|+|+.+|+|..-+.++|...++.|.|.|
T Consensus 8 ~~il~~L~~~~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~ 51 (144)
T 2cfx_A 8 LNIIEELKKDSRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQ 51 (144)
T ss_dssp HHHHHHHHHCSCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEE
Confidence 46788888889999999999999999999999999999999986
No 354
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=87.26 E-value=0.88 Score=39.05 Aligned_cols=44 Identities=20% Similarity=0.157 Sum_probs=41.4
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
.+++.+++.++.+|..|+|+.+|+|..-+..+|...++.|.|.|
T Consensus 13 ~~il~~L~~~~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~ 56 (162)
T 2p5v_A 13 IKILQVLQENGRLTNVELSERVALSPSPCLRRLKQLEDAGIVRQ 56 (162)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEee
Confidence 57888888899999999999999999999999999999999986
No 355
>3b77_A Uncharacterized protein; pleckstrin-homology domain, structural genomics, joint cente structural genomics, JCSG; 2.42A {Exiguobacterium sibiricum} SCOP: b.55.1.13
Probab=87.05 E-value=0.46 Score=41.75 Aligned_cols=88 Identities=10% Similarity=0.023 Sum_probs=62.6
Q ss_pred CCCCCC--CCceEEeecceeeecCCCCCcccCcEEEeeeeeeeee------cC--ccccccch--hhhhHHHhhhhcccc
Q psy4132 8 SFELSP--DESPVLKHSNVRLYDGENKSQFQRGELILTSHRLFWQ------KD--ITLCLALS--YIQNAVEEAKSMFNL 75 (473)
Q Consensus 8 ~~~l~~--~E~~~~~~~~v~ly~g~~~~~~~~G~l~LTshRii~~------~~--~~~~l~l~--~v~~~~~~~~~~~~~ 75 (473)
.+-|.| ||.+...-.-+ ...+.+|++|||.+ ++ .-.++|.+ .|.++..+.+|.|
T Consensus 19 ~~~Ll~EdgE~I~~ayk~i------------rD~~iFTNkRLI~vD~Qg~TGKK~~~~siPY~~~~I~~~siETAGtf-- 84 (193)
T 3b77_A 19 DDYVLHEDGEKIYFLIKSK------------TDEYCFTNLALVHLDGESAVSSKRVLYRYPYAHYPIRHVMFETAGTV-- 84 (193)
T ss_dssp GGGSCGGGTCCEEEEEECS------------SEEEEEESSEEEEEECCCC--CCCEEEEEETTTSCEEEEEEECCCSS--
T ss_pred hhhccCCCCCEEeeeeeec------------ceEEEEecchhheeccccccceeEEEEEeccCCCceeEEEEEeccee--
Confidence 444666 88887654432 33899999999999 22 23489999 9999988887874
Q ss_pred cCcccEEEEeecCCCCCCCCCCCCCCCCeEEEeccC--C-CchHHHHHHHHH
Q psy4132 76 TAGRKIILYLSKAVPGKNLGPSATSAYDYVKLSFRE--G-IQNEFLDALKST 124 (473)
Q Consensus 76 ~~s~ki~~~l~~~~~~~~~~p~~~~~~~~iklsFr~--g-g~~~F~~~l~~~ 124 (473)
-..+-|++.+. +..+++.|++ + ...+||..|...
T Consensus 85 DlDaElki~i~---------------~~~~~Ief~K~~~~di~~lyk~L~~i 121 (193)
T 3b77_A 85 DLDVEIKFEIG---------------GKHYSIDVDKKQLEHVKDLYKALLAI 121 (193)
T ss_dssp CCEEEEEEEET---------------TEEEEEEEEGGGHHHHHHHHHHHHHH
T ss_pred ccCccEEEEEc---------------CceEEEEeCCcchhhHHHHHHHHHHH
Confidence 67788888884 2346788887 4 446777777653
No 356
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=86.58 E-value=0.95 Score=38.26 Aligned_cols=44 Identities=14% Similarity=0.157 Sum_probs=41.3
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
.+++.+++.++.+|..++|+.+|+|..-+.++|...++.|.|.|
T Consensus 12 ~~il~~L~~~~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~ 55 (151)
T 2dbb_A 12 MQLVKILSENSRLTYRELADILNTTRQRIARRIDKLKKLGIIRK 55 (151)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHTTSCHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 57788888899999999999999999999999999999999986
No 357
>2k4b_A Transcriptional regulator; DNA binding protein, winged helix; NMR {Lactococcus lactis subsp}
Probab=86.50 E-value=0.52 Score=37.19 Aligned_cols=53 Identities=11% Similarity=0.002 Sum_probs=41.6
Q ss_pred HHHHHhhCCCCCHHHHHHhhC----CcHHHHHHHHHHHHHcCCccccCCcccccccc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLAS----VSLVIAKHRLLLAETHGKLCRDQSIEGLRFYE 465 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~----~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~ 465 (473)
++.++...+++|+.|+++.++ |+.+-....|...|++|+|.|....-...|++
T Consensus 40 VL~~L~~~~~~t~~eL~~~l~~~~~~s~sTVt~~L~rLe~KGlV~R~~~gR~~~Y~p 96 (99)
T 2k4b_A 40 VMRVIWSLGEARVDEIYAQIPQELEWSLATVKTLLGRLVKKEMLSTEKEGRKFVYRP 96 (99)
T ss_dssp HHHHHHHHSCEEHHHHHHTCCGGGCCCHHHHHHHHHHHHHTTSCEEEEETTEEEEEC
T ss_pred HHHHHHhCCCCCHHHHHHHHhcccCCCHhhHHHHHHHHHHCCCEEEEeCCCEEEEEE
Confidence 334444467899999999996 78899999999999999999976544455554
No 358
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=86.46 E-value=1.1 Score=37.22 Aligned_cols=46 Identities=13% Similarity=0.177 Sum_probs=41.0
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
..++..+..++.+|..++|+.+|+|..-..++|...++.|.|.|-.
T Consensus 7 ~~il~~L~~~~~~~~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~ 52 (141)
T 1i1g_A 7 KIILEILEKDARTPFTEIAKKLGISETAVRKRVKALEEKGIIEGYT 52 (141)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHHHHHHHHTSSCCCC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEeccc
Confidence 4567777788899999999999999999999999999999997643
No 359
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=86.43 E-value=1 Score=38.10 Aligned_cols=44 Identities=14% Similarity=0.132 Sum_probs=40.8
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
.+++.++..++.+|..++|+.+|+|..-+..+|...++.|.|.|
T Consensus 10 ~~iL~~L~~~~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~ 53 (150)
T 2w25_A 10 RILVRELAADGRATLSELATRAGLSVSAVQSRVRRLESRGVVQG 53 (150)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 46777888889999999999999999999999999999999975
No 360
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=86.42 E-value=0.95 Score=38.35 Aligned_cols=44 Identities=14% Similarity=0.084 Sum_probs=41.4
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
.+++.+++.++.+|..++|+.+|+|..-+.++|...++.|.+.|
T Consensus 11 ~~il~~L~~~~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~ 54 (152)
T 2cg4_A 11 RGILEALMGNARTAYAELAKQFGVSPETIHVRVEKMKQAGIITG 54 (152)
T ss_dssp HHHHHHHHHCTTSCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHcCCcce
Confidence 57788888899999999999999999999999999999999986
No 361
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=86.39 E-value=1.1 Score=37.88 Aligned_cols=44 Identities=14% Similarity=0.174 Sum_probs=41.2
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
.+++.+++.++++|..++|+.+|+|..-...+|...++.|.|.|
T Consensus 6 ~~il~~L~~~~~~~~~ela~~lg~s~~tv~~~l~~L~~~G~i~~ 49 (150)
T 2pn6_A 6 LRILKILQYNAKYSLDEIAREIRIPKATLSYRIKKLEKDGVIKG 49 (150)
T ss_dssp HHHHHHHTTCTTSCHHHHHHHHTSCHHHHHHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEE
Confidence 56778888889999999999999999999999999999999987
No 362
>3i71_A Ethanolamine utilization protein EUTK; helix-turn-helix, unknown function; HET: FLC; 2.10A {Escherichia coli}
Probab=86.35 E-value=1.5 Score=30.37 Aligned_cols=39 Identities=18% Similarity=0.054 Sum_probs=34.3
Q ss_pred hhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 418 SQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 418 ~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
+-.++.|+.|.|..|+||...|+..|+..-..|.|-.-.
T Consensus 14 s~~QGMTaGEVAA~f~w~Le~ar~aLeqLf~~G~LRKRs 52 (68)
T 3i71_A 14 SVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRS 52 (68)
T ss_dssp HCTTCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHhccccHHHHHHHhCCcHHHHHHHHHHHHhcchhhhhc
Confidence 345799999999999999999999999999999886433
No 363
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=85.99 E-value=1.3 Score=38.60 Aligned_cols=44 Identities=11% Similarity=0.220 Sum_probs=41.4
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
.+++.+++.++.+|..|+|+.+|+|..-+..+|...++.|.|.|
T Consensus 30 ~~IL~~L~~~~~~s~~eLA~~lglS~~tv~~rl~~L~~~G~I~~ 73 (171)
T 2e1c_A 30 KKIIKILQNDGKAPLREISKITGLAESTIHERIRKLRESGVIKK 73 (171)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEe
Confidence 57888888899999999999999999999999999999999986
No 364
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=85.85 E-value=1.2 Score=37.62 Aligned_cols=44 Identities=11% Similarity=0.220 Sum_probs=41.3
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
.+++.+++.++.+|..++|+.+|+|..-+..+|...++.|.|.|
T Consensus 10 ~~il~~L~~~~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~ 53 (151)
T 2cyy_A 10 KKIIKILQNDGKAPLREISKITGLAESTIHERIRKLRESGVIKK 53 (151)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHCSCHHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEE
Confidence 56788888899999999999999999999999999999999987
No 365
>2h09_A Transcriptional regulator MNTR; transcription regulator, diphtheria toxin, manganese transport, structural genomics, NPPSFA; 2.10A {Escherichia coli}
Probab=85.06 E-value=1.4 Score=37.26 Aligned_cols=50 Identities=14% Similarity=0.025 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 407 ASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 407 ~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
+.++..+..++...+.+|..++|+.+++|-.-..+.|...+..|+|.|..
T Consensus 39 ~~~~~~i~~~l~~~~~~~~~~la~~l~vs~~tvs~~l~~Le~~Glv~r~~ 88 (155)
T 2h09_A 39 DDYVELISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIP 88 (155)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHTSCHHHHHHHHHHHHHTTCEEEET
T ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHhCcCHHHHHHHHHHHHHCCCEEEec
Confidence 45677777777777889999999999999999999999999999998764
No 366
>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A
Probab=85.05 E-value=0.88 Score=36.00 Aligned_cols=54 Identities=15% Similarity=0.107 Sum_probs=41.5
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcccccccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYE 465 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~ 465 (473)
.+++.++. .+.+|..|+|+.+++|..-....|...++.|+|.+........|+.
T Consensus 29 ~~IL~~L~-~~~~~~~ela~~l~is~stvs~~L~~L~~~Glv~~~~~gr~~~y~l 82 (106)
T 1r1u_A 29 IRIMELLS-VSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSL 82 (106)
T ss_dssp HHHHHHHH-HCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEE
T ss_pred HHHHHHHH-hCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeCCEEEEEE
Confidence 34555555 4679999999999999999999999999999998765322234433
No 367
>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH MOT protein structure initiative, midwest center for structural genomics; 1.55A {Archaeoglobus fulgidus} SCOP: a.4.5.50
Probab=85.02 E-value=0.86 Score=35.56 Aligned_cols=48 Identities=17% Similarity=0.203 Sum_probs=40.7
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSI 458 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~ 458 (473)
..++.++...+++|..++|+.++++..-+...|...++.|+|.|....
T Consensus 23 ~~il~~l~~~~~~s~~ela~~l~is~~tv~~~l~~L~~~glv~~~~~~ 70 (109)
T 1sfx_A 23 VRIYSLLLERGGMRVSEIARELDLSARFVRDRLKVLLKRGFVRREIVE 70 (109)
T ss_dssp HHHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEeec
Confidence 345555555688999999999999999999999999999999986543
No 368
>2ia0_A Putative HTH-type transcriptional regulator PF086; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=84.80 E-value=1.4 Score=38.35 Aligned_cols=44 Identities=11% Similarity=0.193 Sum_probs=41.2
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
.+++.+++.++.+|..++|+.+++|..-+..+|...++.|.|.|
T Consensus 20 ~~IL~~L~~~~~~s~~eLA~~lglS~~tv~~~l~~L~~~G~I~~ 63 (171)
T 2ia0_A 20 RNILRLLKKDARLTISELSEQLKKPESTIHFRIKKLQERGVIER 63 (171)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEe
Confidence 57888888899999999999999999999999999999999975
No 369
>2x4h_A Hypothetical protein SSO2273; transcription; 2.30A {Sulfolobus solfataricus}
Probab=84.79 E-value=1.5 Score=36.21 Aligned_cols=50 Identities=6% Similarity=0.030 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 407 ASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 407 ~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
..++..+..+....+.+|..++|+.++++..-....|...|+.|+|.|+.
T Consensus 16 ~~~L~~l~~l~~~~~~~s~~ela~~l~is~~tv~~~l~~Le~~Gli~r~~ 65 (139)
T 2x4h_A 16 FSYLLTIKRYNDSGEGAKINRIAKDLKIAPSSVFEEVSHLEEKGLVKKKE 65 (139)
T ss_dssp HHHHHHHHHHHTTTSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET
T ss_pred HHHHHHHHHHHhcCCCcCHHHHHHHhCCChHHHHHHHHHHHHCCCEEecC
Confidence 45566666666667889999999999999999999999999999999876
No 370
>2kko_A Possible transcriptional regulatory protein (possibly ARSR-family); NESG, DNA-binding, transcription regulation, WHTH, homodimer; NMR {Mycobacterium bovis} PDB: 3gw2_A
Probab=84.74 E-value=0.71 Score=36.78 Aligned_cols=53 Identities=11% Similarity=0.095 Sum_probs=40.9
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcccccccc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYE 465 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~ 465 (473)
+++.++. .+.+|..|+|+.+++|..-+...|...++.|+|.+.......+|+.
T Consensus 29 ~IL~~L~-~~~~s~~eLa~~lgis~stvs~~L~~L~~~GlV~~~~~gr~~~y~l 81 (108)
T 2kko_A 29 QILDLLA-QGERAVEAIATATGMNLTTASANLQALKSGGLVEARREGTRQYYRI 81 (108)
T ss_dssp HHHHHHT-TCCEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEEEETTEEEEEE
T ss_pred HHHHHHH-cCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeCCEEEEEE
Confidence 3444554 3789999999999999999999999999999998765322334443
No 371
>2oqg_A Possible transcriptional regulator, ARSR family P; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 1.54A {Rhodococcus SP}
Probab=84.53 E-value=0.9 Score=36.17 Aligned_cols=46 Identities=9% Similarity=-0.055 Sum_probs=39.2
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
..++.++ ..+.+|..++|+.+++|..-....|...++.|+|.+...
T Consensus 24 ~~IL~~L-~~~~~~~~ela~~l~is~~tv~~~l~~L~~~gli~~~~~ 69 (114)
T 2oqg_A 24 WEILTEL-GRADQSASSLATRLPVSRQAIAKHLNALQACGLVESVKV 69 (114)
T ss_dssp HHHHHHH-HHSCBCHHHHHHHSSSCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHH-HcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeeEEec
Confidence 4455566 457799999999999999999999999999999987543
No 372
>3pqk_A Biofilm growth-associated repressor; helix-turn-helix motif, winged-helix fold, transcriptional R DNA binding, transcription; 2.09A {Xylella fastidiosa} PDB: 3pqj_A
Probab=83.96 E-value=1.2 Score=34.75 Aligned_cols=54 Identities=7% Similarity=0.025 Sum_probs=42.2
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcccccccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYE 465 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~ 465 (473)
-.++.++.. +.+|..|+++.+++|.......|...++.|+|.+........|..
T Consensus 26 ~~Il~~L~~-~~~~~~ela~~l~is~~tvs~~L~~L~~~Glv~~~~~g~~~~y~l 79 (102)
T 3pqk_A 26 LMLVCTLVE-GEFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRL 79 (102)
T ss_dssp HHHHHHHHT-CCBCHHHHHHHHTCCTTHHHHHHHHHHHTTSEEEECSSSCCEEEE
T ss_pred HHHHHHHHh-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeCCEEEEEE
Confidence 345555543 679999999999999999999999999999998765433344443
No 373
>3k2z_A LEXA repressor; winged helix-turn-helix, SOS system, autoca cleavage, DNA damage, DNA repair, DNA replication, DNA-BIND hydrolase; 1.37A {Thermotoga maritima}
Probab=83.89 E-value=1.6 Score=38.76 Aligned_cols=51 Identities=18% Similarity=0.130 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhhCC-CCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 407 ASFVEKTYEIVSQNV-FVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 407 ~~~~~~~~~~~~~~~-~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
..++..+.+++...+ ..|..|+|+.+++|..-+..+|...|+.|.|.|+..
T Consensus 8 ~~il~~I~~~~~~~g~~~s~~eia~~lgl~~~tv~~~l~~Le~~G~i~~~~~ 59 (196)
T 3k2z_A 8 RKVLLFIEEFIEKNGYPPSVREIARRFRITPRGALLHLIALEKKGYIERKNG 59 (196)
T ss_dssp HHHHHHHHHHHHHHSSCCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEECC--
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHcCCCcHHHHHHHHHHHHCCCEEecCC
Confidence 467777777776655 799999999999999999999999999999999854
No 374
>3ech_A MEXR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28 PDB: 1lnw_A 3mex_A
Probab=83.17 E-value=1.2 Score=36.80 Aligned_cols=48 Identities=6% Similarity=0.154 Sum_probs=35.2
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.++.++...+++|..++|+.++++.+-+...|...++.|+|.|..+..
T Consensus 41 ~vL~~l~~~~~~t~~eLa~~l~~~~~tvs~~l~~L~~~Glv~r~~~~~ 88 (142)
T 3ech_A 41 HVLKLIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPS 88 (142)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHC---CHHHHHHHHHHHTTSEEC-----
T ss_pred HHHHHHHhCCCcCHHHHHHHhCCCHHHHHHHHHHHHHCCCEeeccCCC
Confidence 344555566899999999999999999999999999999999976554
No 375
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=82.55 E-value=1.5 Score=35.90 Aligned_cols=48 Identities=15% Similarity=0.101 Sum_probs=40.7
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.++..+...+++|..++|+.++++..-+...|...++.|+|.|..+..
T Consensus 33 ~iL~~l~~~~~~~~~ela~~l~~s~~tvs~~l~~L~~~glv~~~~~~~ 80 (138)
T 3bpv_A 33 ACLLRIHREPGIKQDELATFFHVDKGTIARTLRRLEESGFIEREQDPE 80 (138)
T ss_dssp HHHHHHHHSTTCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETT
T ss_pred HHHHHHHHcCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeecCCC
Confidence 345555567899999999999999999999999999999999865443
No 376
>3g3z_A NMB1585, transcriptional regulator, MARR family; transcription factor, structur genomics, oxford protein production facility; 2.10A {Neisseria meningitidis serogroup B}
Probab=82.42 E-value=1.9 Score=35.73 Aligned_cols=48 Identities=6% Similarity=-0.086 Sum_probs=40.2
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.++.++...+++|..++|+.++++.+-+...|...+..|+|.|..+..
T Consensus 35 ~iL~~l~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~ 82 (145)
T 3g3z_A 35 AVLYTLATEGSRTQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQ 82 (145)
T ss_dssp HHHHHHHHHCSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECCCSS
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeccCCC
Confidence 344445555789999999999999999999999999999999866544
No 377
>3bro_A Transcriptional regulator; helix_TURN_helix, multiple antibiotic resistance protein (MA structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.04A {Oenococcus oeni} SCOP: a.4.5.28
Probab=82.29 E-value=1.9 Score=35.36 Aligned_cols=47 Identities=21% Similarity=0.073 Sum_probs=38.8
Q ss_pred HHHHhhCC--CCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCccc
Q psy4132 414 YEIVSQNV--FVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEG 460 (473)
Q Consensus 414 ~~~~~~~~--~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g 460 (473)
+.++...+ ++|..++|+.++++..-+...|...++.|+|.|......
T Consensus 40 L~~l~~~~~~~~~~~ela~~l~~~~~tvs~~l~~Le~~Gli~r~~~~~d 88 (141)
T 3bro_A 40 IDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKD 88 (141)
T ss_dssp HHHHHHTTTSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSC
T ss_pred HHHHHHCCCCCcCHHHHHHHHCCCcchHHHHHHHHHHCCCEEeeCCCcC
Confidence 33444444 899999999999999999999999999999998654443
No 378
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=82.20 E-value=2.5 Score=32.84 Aligned_cols=50 Identities=6% Similarity=0.030 Sum_probs=43.4
Q ss_pred cHHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 406 DASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 406 ~~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
.-+++..++..+.. + ++..++|..++++...+...+...++.|+|.+..+
T Consensus 6 ~~eIi~~IL~~i~~-~-~~~t~La~~~~ls~~~~~~~l~~L~~~GLI~~~~~ 55 (95)
T 1r7j_A 6 KLEIIQAILEACKS-G-SPKTRIMYGANLSYALTGRYIKMLMDLEIIRQEGK 55 (95)
T ss_dssp HHHHHHHHHHHHTT-C-BCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETT
T ss_pred HHHHHHHHHHHHHc-C-CCHHHHHHHhCcCHHHHHHHHHHHHHCCCeEEECC
Confidence 34677788887764 4 99999999999999999999999999999998753
No 379
>2fbh_A Transcriptional regulator PA3341; MARR, transcription regulator, APC5857, structural genomics, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=82.01 E-value=2.2 Score=35.10 Aligned_cols=47 Identities=15% Similarity=-0.016 Sum_probs=40.3
Q ss_pred HHHHH-hhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIV-SQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~-~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++.++ ...+++|..++|+.++++..-+...|...++.|+|.|..+..
T Consensus 42 iL~~l~~~~~~~t~~~la~~l~~s~~~vs~~l~~L~~~glv~r~~~~~ 89 (146)
T 2fbh_A 42 VLLHLARHRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAE 89 (146)
T ss_dssp HHHHHHHCSSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCBT
T ss_pred HHHHHHHcCCCCCHHHHHHHhCCChhhHHHHHHHHHHCCCeeecCCCc
Confidence 44444 567899999999999999999999999999999999876544
No 380
>3tgn_A ADC operon repressor ADCR; helix-turn-helix, transcriptional regulator, transcription; 2.00A {Streptococcus pneumoniae}
Probab=81.59 E-value=2.1 Score=35.43 Aligned_cols=48 Identities=17% Similarity=0.187 Sum_probs=38.5
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
..++.++...+ +|..++|+.++++.+-+...|...++.|+|.|..+..
T Consensus 41 ~~iL~~l~~~~-~t~~eLa~~l~~s~~tvs~~l~~L~~~Glv~r~~~~~ 88 (146)
T 3tgn_A 41 EHILMLLSEES-LTNSELARRLNVSQAAVTKAIKSLVKEGMLETSKDSK 88 (146)
T ss_dssp HHHHHHHTTCC-CCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC-----
T ss_pred HHHHHHHHhCC-CCHHHHHHHHCCCHHHHHHHHHHHHHCCCeEeccCCC
Confidence 44566666677 9999999999999999999999999999999865433
No 381
>2jsc_A Transcriptional regulator RV1994C/MT2050; cadmium, transcriptional repressor, solution structure, STRU genomics; NMR {Mycobacterium tuberculosis}
Probab=81.14 E-value=1.3 Score=35.81 Aligned_cols=55 Identities=7% Similarity=-0.028 Sum_probs=42.8
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCccccccccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYEN 466 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~n 466 (473)
.+++.++. .+..+..|+|+.+++|..-....|...++.|+|.+.....+.+|..+
T Consensus 24 ~~IL~~L~-~~~~~~~eLa~~lgis~stvs~~L~~L~~~GlV~~~~~gr~~~y~l~ 78 (118)
T 2jsc_A 24 CRILVALL-DGVCYPGQLAAHLGLTRSNVSNHLSCLRGCGLVVATYEGRQVRYALA 78 (118)
T ss_dssp HHHHHHHH-TTCCSTTTHHHHHSSCHHHHHHHHHHHTTTTSEEEEECSSSEEEEES
T ss_pred HHHHHHHH-cCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCceEEEEECCEEEEEEC
Confidence 44555565 46789999999999999999999999999999987654334445444
No 382
>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, STR genomics, PSI-2, protein structure initiative; 2.01A {Silicibacter pomeroyi dss-3}
Probab=81.10 E-value=1.9 Score=35.91 Aligned_cols=48 Identities=17% Similarity=0.025 Sum_probs=40.7
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCccc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEG 460 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g 460 (473)
++..+...+++|..++|+.++++..-+...|...+..|+|.|..+..+
T Consensus 45 iL~~l~~~~~~t~~ela~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~d 92 (152)
T 3bj6_A 45 ILEGLSLTPGATAPQLGAALQMKRQYISRILQEVQRAGLIERRTNPEH 92 (152)
T ss_dssp HHHHHHHSTTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCSSS
T ss_pred HHHHHHhCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCeeecCCccc
Confidence 444555667899999999999999999999999999999998765443
No 383
>2pex_A Transcriptional regulator OHRR; transcription regulator; 1.90A {Xanthomonas campestris} PDB: 2pfb_A
Probab=81.03 E-value=1.6 Score=36.52 Aligned_cols=47 Identities=9% Similarity=0.024 Sum_probs=38.7
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++.++...+++|..++|+.++++..-+...|...+++|+|.|..+..
T Consensus 52 iL~~l~~~~~~t~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~ 98 (153)
T 2pex_A 52 VMLVLWETDERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTRAAS 98 (153)
T ss_dssp HHHHHHHSCSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC---
T ss_pred HHHHHHhCCCcCHHHHHHHhCCCcccHHHHHHHHHHCCCEeecCCcc
Confidence 44455556889999999999999999999999999999999865443
No 384
>2fa5_A Transcriptional regulator MARR/EMRR family; multiple antibiotics resistance repressor, XCC structural genomics, X-RAY diffraction; 1.80A {Xanthomonas campestris}
Probab=80.98 E-value=2.4 Score=35.79 Aligned_cols=47 Identities=11% Similarity=0.053 Sum_probs=37.5
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++..+...+++|..++|+.++++..-+...|...++.|+|.|.....
T Consensus 54 iL~~l~~~~~~t~~ela~~l~is~~tvs~~l~~Le~~glv~r~~~~~ 100 (162)
T 2fa5_A 54 VITILALYPGSSASEVSDRTAMDKVAVSRAVARLLERGFIRRETHGD 100 (162)
T ss_dssp HHHHHHHSTTCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC-----
T ss_pred HHHHHHhCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeecCCC
Confidence 44445557899999999999999999999999999999999865443
No 385
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance repressor, structura genomics, joint center for structural genomics, JCSG; 2.20A {Streptococcus suis}
Probab=80.88 E-value=1.8 Score=35.46 Aligned_cols=48 Identities=10% Similarity=0.146 Sum_probs=40.4
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.++..+...+++|..++|+.++++..-+...|...++.|+|.|..+..
T Consensus 35 ~iL~~l~~~~~~~~~ela~~l~is~~~vs~~l~~L~~~gli~~~~~~~ 82 (142)
T 3bdd_A 35 SILQTLLKDAPLHQLALQERLQIDRAAVTRHLKLLEESGYIIRKRNPD 82 (142)
T ss_dssp HHHHHHHHHCSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSS
T ss_pred HHHHHHHhCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCCCC
Confidence 344455556789999999999999999999999999999999876543
No 386
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=80.79 E-value=2.2 Score=35.33 Aligned_cols=48 Identities=10% Similarity=0.100 Sum_probs=38.7
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.++..+...+++|..++|+.++++.+-+...|...|+.|+|.|..+..
T Consensus 44 ~iL~~l~~~~~~t~~ela~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~ 91 (148)
T 3nrv_A 44 RIISVLSSASDCSVQKISDILGLDKAAVSRTVKKLEEKKYIEVNGHSE 91 (148)
T ss_dssp HHHHHHHHSSSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC-----
T ss_pred HHHHHHHcCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeecCCC
Confidence 455556667899999999999999999999999999999999875443
No 387
>2rdp_A Putative transcriptional regulator MARR; PFAM PF01047, winged-helix binding motif, structural genomics, PSI-2; 2.30A {Geobacillus stearothermophilus}
Probab=80.70 E-value=1.8 Score=36.07 Aligned_cols=47 Identities=13% Similarity=0.073 Sum_probs=39.3
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++.++...+++|..++|+.++++..-+...|...++.|+|.|.....
T Consensus 47 iL~~l~~~~~~t~~ela~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~ 93 (150)
T 2rdp_A 47 ALQWLLEEGDLTVGELSNKMYLACSTTTDLVDRMERNGLVARVRDEH 93 (150)
T ss_dssp HHHHHHHHCSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECCC
T ss_pred HHHHHHHcCCCCHHHHHHHHCCCchhHHHHHHHHHHCCCeeecCCCC
Confidence 34444445789999999999999999999999999999999865443
No 388
>1ku9_A Hypothetical protein MJ223; putative transcription factor, homodimeric winged-helix fold, structural genomics, PSI; 2.80A {Methanocaldococcus jannaschii} SCOP: a.4.5.36
Probab=80.69 E-value=2 Score=35.52 Aligned_cols=40 Identities=13% Similarity=-0.059 Sum_probs=36.4
Q ss_pred CCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 420 NVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 420 ~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.+++|..++|+.+++|.+-+...|...++.|+|.|..+..
T Consensus 39 ~~~~t~~ela~~l~~~~stvs~~l~~L~~~G~v~r~~~~~ 78 (152)
T 1ku9_A 39 DKPLTISDIMEELKISKGNVSMSLKKLEELGFVRKVWIKG 78 (152)
T ss_dssp SSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCTT
T ss_pred CCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEecCC
Confidence 4789999999999999999999999999999999976444
No 389
>1r1t_A Transcriptional repressor SMTB; zinc, transcriptional regulation, winged HTH protein, DNA binding, transcription repressor; 1.70A {Synechococcus elongatus pcc 7942} SCOP: a.4.5.5 PDB: 1r23_A 1smt_A 1r22_A
Probab=80.65 E-value=1.8 Score=35.24 Aligned_cols=53 Identities=9% Similarity=0.074 Sum_probs=41.6
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcccccccc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYE 465 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~ 465 (473)
+++.++.. +..+..++|+.+++|..-....|...++.|++.+.....+..|..
T Consensus 50 ~IL~~L~~-~~~s~~ela~~lgis~stvs~~L~~Le~~Glv~~~~~gr~~~y~l 102 (122)
T 1r1t_A 50 RLLSLLAR-SELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQGRHVYYQL 102 (122)
T ss_dssp HHHHHHTT-CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEE
T ss_pred HHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeCCEEEEEE
Confidence 45555543 679999999999999999999999999999998765433344443
No 390
>2d1h_A ST1889, 109AA long hypothetical transcriptional regulator; helix-turn-helix, intermolecular and intramolecular S-S bond structural genomics; 2.05A {Sulfolobus tokodaii} SCOP: a.4.5.50
Probab=80.63 E-value=2.1 Score=33.28 Aligned_cols=48 Identities=17% Similarity=0.182 Sum_probs=40.6
Q ss_pred HHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 410 VEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 410 ~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
...+..++...+++|..|+|+.+++|..-+...|...++.|+|.|...
T Consensus 24 ~~~l~~l~~~~~~~t~~ela~~l~is~~tv~~~l~~L~~~g~v~~~~~ 71 (109)
T 2d1h_A 24 VAVLLKMVEIEKPITSEELADIFKLSKTTVENSLKKLIELGLVVRTKT 71 (109)
T ss_dssp HHHHHHHHHHCSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEeecc
Confidence 344455555578899999999999999999999999999999998653
No 391
>2hr3_A Probable transcriptional regulator; MCSG, structural genomics, PSI-2, protein structure initiati midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=80.56 E-value=2.4 Score=35.09 Aligned_cols=48 Identities=13% Similarity=0.030 Sum_probs=39.3
Q ss_pred HHHHHHhh-CCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 412 KTYEIVSQ-NVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 412 ~~~~~~~~-~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.++..+.. .+++|..++|+.++++..-+...|...++.|+|.|..+..
T Consensus 39 ~iL~~l~~~~~~~~~~~la~~l~i~~~~vs~~l~~Le~~glv~r~~~~~ 87 (147)
T 2hr3_A 39 VVLGAIDRLGGDVTPSELAAAERMRSSNLAALLRELERGGLIVRHADPQ 87 (147)
T ss_dssp HHHHHHHHTTSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEC---
T ss_pred HHHHHHHHcCCCCCHHHHHHHhCCChhhHHHHHHHHHHCCCEeeCCCCC
Confidence 34445555 7899999999999999999999999999999999875543
No 392
>2a61_A Transcriptional regulator TM0710; APC4350, MCSG, midwest center for structural genomics, PSI, protein structure initiative, MARR; 1.80A {Thermotoga maritima} SCOP: a.4.5.28
Probab=80.49 E-value=1.6 Score=36.10 Aligned_cols=47 Identities=15% Similarity=0.022 Sum_probs=39.6
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++.++...+++|..++|+.++++..-+...|...++.|+|.|..+..
T Consensus 38 iL~~l~~~~~~~~~~la~~l~~s~~tvs~~l~~L~~~glv~r~~~~~ 84 (145)
T 2a61_A 38 ILQKIYFEGPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPA 84 (145)
T ss_dssp HHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETT
T ss_pred HHHHHHHcCCCCHHHHHHHHCCCchhHHHHHHHHHHCCCeeecCCCC
Confidence 44444456789999999999999999999999999999999865443
No 393
>2gxg_A 146AA long hypothetical transcriptional regulator; winged helix; 1.45A {Sulfolobus tokodaii} PDB: 2eb7_A 2yr2_A 3gez_A 3gf2_A* 3gfi_A 3gfm_A 3gfj_A 3gfl_A
Probab=80.44 E-value=2.2 Score=35.17 Aligned_cols=46 Identities=15% Similarity=0.014 Sum_probs=39.1
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++.++. .+++|..++|+.++++.+-+...|...++.|+|.|..+..
T Consensus 42 iL~~l~-~~~~~~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~ 87 (146)
T 2gxg_A 42 VLRATS-DGPKTMAYLANRYFVTQSAITASVDKLEEMGLVVRVRDRE 87 (146)
T ss_dssp HHHHHT-TSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEECSS
T ss_pred HHHHHh-cCCcCHHHHHHHhCCCchhHHHHHHHHHHCCCEEeecCCC
Confidence 344445 6889999999999999999999999999999999865443
No 394
>3cdh_A Transcriptional regulator, MARR family; helix-turn-hleix, structura genomics, PSI-2, protein structure initiative; 2.69A {Silicibacter pomeroyi dss-3}
Probab=80.22 E-value=2.3 Score=35.66 Aligned_cols=48 Identities=8% Similarity=0.129 Sum_probs=39.3
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.++.++...+++|..++|+.++++..-+...|...++.|+|.|.....
T Consensus 47 ~iL~~l~~~~~~t~~ela~~l~i~~~tvs~~l~~Le~~Glv~r~~~~~ 94 (155)
T 3cdh_A 47 RVLACLVDNDAMMITRLAKLSLMEQSRMTRIVDQMDARGLVTRVADAK 94 (155)
T ss_dssp HHHHHHSSCSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC---
T ss_pred HHHHHHHHCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeccCCC
Confidence 344555566789999999999999999999999999999999876543
No 395
>2qww_A Transcriptional regulator, MARR family; YP_013417.1, multiple antibiotic-resistance repressor (MARR) structural genomics; HET: MSE; 2.07A {Listeria monocytogenes str}
Probab=80.17 E-value=2.1 Score=35.76 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=38.0
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
.++.++...+++|..++|+.++++..-+...|...|++|+|.|
T Consensus 45 ~iL~~l~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r 87 (154)
T 2qww_A 45 AMINVIYSTPGISVADLTKRLIITGSSAAANVDGLISLGLVVK 87 (154)
T ss_dssp HHHHHHHHSTTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEe
Confidence 3444555668899999999999999999999999999999999
No 396
>3f6o_A Probable transcriptional regulator, ARSR family protein; transcriptional regulator,RHA00566,MCSG, structural genomics, PSI-2; 1.90A {Rhodococcus SP}
Probab=80.05 E-value=1.3 Score=35.70 Aligned_cols=46 Identities=13% Similarity=0.110 Sum_probs=39.2
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
-+|+.++. .+.+|..|+|+.+++|..-+...|...++.|+|.+...
T Consensus 21 ~~Il~~L~-~~~~~~~eLa~~l~is~~tvs~hL~~L~~~GlV~~~~~ 66 (118)
T 3f6o_A 21 RAVLGRLS-RGPATVSELAKPFDMALPSFMKHIHFLEDSGWIRTHKQ 66 (118)
T ss_dssp HHHHHHHH-TCCEEHHHHHTTCCSCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHH-hCCCCHHHHHHHhCcCHHHHHHHHHHHHHCCCeEEEec
Confidence 44555565 47899999999999999999999999999999987554
No 397
>3r0a_A Putative transcriptional regulator; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.31A {Methanosarcina mazei}
Probab=79.93 E-value=2 Score=35.01 Aligned_cols=46 Identities=9% Similarity=0.062 Sum_probs=38.8
Q ss_pred HHHHHHHhhCCC--CCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 411 EKTYEIVSQNVF--VTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 411 ~~~~~~~~~~~~--ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
..++..+...++ +|..|+|..+++|..-+...|...++.|+|.|..
T Consensus 29 ~~il~~L~~~~~~~~t~~eLa~~l~~s~sTV~r~L~~L~~~GlV~r~~ 76 (123)
T 3r0a_A 29 LNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSVKKLHEKEILQRSQ 76 (123)
T ss_dssp HHHHHHHHHSTTCCEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeeC
Confidence 345555555554 9999999999999999999999999999999864
No 398
>2lkp_A Transcriptional regulator, ARSR family; symmetric homodimer, NI(II) binding protein, DNA binding Pro transcription regulator; NMR {Mycobacterium tuberculosis}
Probab=79.84 E-value=2.2 Score=34.25 Aligned_cols=51 Identities=10% Similarity=0.139 Sum_probs=40.5
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCccccccc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFY 464 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~ 464 (473)
++.++.. +..|..++|+.+++|..-+...|...|+.|++.+.....+++|.
T Consensus 37 il~~L~~-~~~s~~ela~~l~is~stvsr~l~~Le~~Glv~~~~~~r~~~~~ 87 (119)
T 2lkp_A 37 ILTQLRN-GPLPVTDLAEAIGMEQSAVSHQLRVLRNLGLVVGDRAGRSIVYS 87 (119)
T ss_dssp HHHHHHH-CCCCHHHHHHHHSSCHHHHHHHHHHHHHHCSEEEEEETTEEEEE
T ss_pred HHHHHHH-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEecCCEEEEE
Confidence 4444444 68999999999999999999999999999999876533334443
No 399
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genom transcription; 2.05A {Pyrococcus horikoshii} SCOP: a.4.5.28
Probab=79.83 E-value=1.4 Score=33.99 Aligned_cols=46 Identities=7% Similarity=-0.007 Sum_probs=39.2
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
..++.++...+++|..++|+.+++|.+-....|...++.|+|.|..
T Consensus 19 ~~iL~~L~~~~~~~~~ela~~l~is~~tvs~~l~~L~~~gli~~~~ 64 (100)
T 1ub9_A 19 LGIMIFLLPRRKAPFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYK 64 (100)
T ss_dssp HHHHHHHHHHSEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHhcCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEe
Confidence 4455555556789999999999999999999999999999999643
No 400
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=79.73 E-value=1.6 Score=36.06 Aligned_cols=47 Identities=11% Similarity=0.052 Sum_probs=38.1
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++.++...+++|..++|+.++++..-+...|...++.|+|.|..+..
T Consensus 42 iL~~l~~~~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~ 88 (143)
T 3oop_A 42 VLEGIEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTE 88 (143)
T ss_dssp HHHHHHHHSSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC---
T ss_pred HHHHHHHcCCcCHHHHHHHHCCCHhhHHHHHHHHHHCCCeeccCCCc
Confidence 34444445899999999999999999999999999999999865443
No 401
>3s2w_A Transcriptional regulator, MARR family; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 2.45A {Methanosarcina mazei}
Probab=79.53 E-value=1.8 Score=36.51 Aligned_cols=48 Identities=8% Similarity=0.013 Sum_probs=40.3
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.++.++...+++|..++|+.++++..-+...|...|++|+|.|..+..
T Consensus 54 ~vL~~l~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~ 101 (159)
T 3s2w_A 54 PFLMRLYREDGINQESLSDYLKIDKGTTARAIQKLVDEGYVFRQRDEK 101 (159)
T ss_dssp HHHHHHHHSCSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECC-
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecCCC
Confidence 344455556899999999999999999999999999999999875544
No 402
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=79.18 E-value=1.9 Score=36.01 Aligned_cols=49 Identities=14% Similarity=0.026 Sum_probs=38.0
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCccc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEG 460 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g 460 (473)
.++.++...+++|..++|+.++++..-+...|...+.+|+|.|..+...
T Consensus 45 ~iL~~l~~~~~~~~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~D 93 (149)
T 4hbl_A 45 LVMLTLWEENPQTLNSIGRHLDLSSNTLTPMLKRLEQSGWVKRERQQSD 93 (149)
T ss_dssp HHHHHHHHSSSEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEC------
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeCCCCCC
Confidence 3444555568999999999999999999999999999999998765443
No 403
>3eco_A MEPR; mutlidrug efflux pump regulator winged helix-turn-helix motif, DNA-binding, transcription, transcription regulation; 2.40A {Staphylococcus aureus} SCOP: a.4.5.0
Probab=79.18 E-value=2.1 Score=35.11 Aligned_cols=48 Identities=10% Similarity=-0.019 Sum_probs=39.1
Q ss_pred HHHHHhhCC--CCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCccc
Q psy4132 413 TYEIVSQNV--FVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEG 460 (473)
Q Consensus 413 ~~~~~~~~~--~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g 460 (473)
++.++...+ ++|..++|+.++++.+-+...|...+++|+|.|..+...
T Consensus 36 vL~~l~~~~~~~~t~~ela~~l~~~~~tvs~~l~~Le~~Gli~r~~~~~D 85 (139)
T 3eco_A 36 TLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQD 85 (139)
T ss_dssp HHHHHHHSTTTCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECCC-
T ss_pred HHHHHHhcCCCCcCHHHHHHHhCCCcccHHHHHHHHHHCCCEeecCCCCC
Confidence 344444444 899999999999999999999999999999998765443
No 404
>2xzm_8 RPS25E,; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_8
Probab=79.17 E-value=1.8 Score=35.95 Aligned_cols=51 Identities=14% Similarity=0.037 Sum_probs=44.3
Q ss_pred cCcHHHHHHHHHHHhhC-CCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 404 CEDASFVEKTYEIVSQN-VFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 404 ~~~~~~~~~~~~~~~~~-~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
.-|.....+|.+-+... ..||+..++..+++..+||+..|..++.+|.|..
T Consensus 44 lfDk~tydKL~KEVpk~gKlITpsvlseRlkI~gSLARkaLreL~~kGlIk~ 95 (143)
T 2xzm_8 44 FIEKKNVESIINNPSKVGKVLTVSTVVEKLKVNGSLARQLMRTMADRKLVEK 95 (143)
T ss_dssp CCCHHHHHHHHTCCTTSCSEECHHHHHHHHCBCHHHHHHHHHHHHHTTSEEE
T ss_pred eecHHHHHHHHHHhcccceeecHHHHHHHhcchHHHHHHHHHHHHHCCCEEE
Confidence 34577788888767666 7899999999999999999999999999999974
No 405
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=79.13 E-value=2.3 Score=32.79 Aligned_cols=47 Identities=9% Similarity=-0.077 Sum_probs=40.0
Q ss_pred HHHHHHhhCCCCCHHHH----HHhhCCcHHHHHHHHHHHHHcCCccccCCc
Q psy4132 412 KTYEIVSQNVFVTVEQF----SRLASVSLVIAKHRLLLAETHGKLCRDQSI 458 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~----a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~ 458 (473)
.++..+...+++|..++ |+.++++..-+...|...|+.|+|.|....
T Consensus 12 ~iL~~l~~~~~~~~~el~~~la~~l~is~~tvs~~l~~Le~~gli~r~~~~ 62 (99)
T 1tbx_A 12 IVLAYLYDNEGIATYDLYKKVNAEFPMSTATFYDAKKFLIQEGFVKERQER 62 (99)
T ss_dssp HHHHHHTTCTTCBHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEEEET
T ss_pred HHHHHHHHcCCcCHHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCEEEEecC
Confidence 45555566788999999 999999999999999999999999986543
No 406
>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28
Probab=78.69 E-value=2.2 Score=35.12 Aligned_cols=47 Identities=19% Similarity=0.183 Sum_probs=40.0
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++..+...+++|..++|+.++++..-+...|...++.|+|.|..+..
T Consensus 34 iL~~l~~~~~~t~~~la~~l~~s~~~vs~~l~~Le~~gli~r~~~~~ 80 (144)
T 1lj9_A 34 YLVRVCENPGIIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDAS 80 (144)
T ss_dssp HHHHHHHSTTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSS
T ss_pred HHHHHHHCcCcCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeecCCC
Confidence 44455566789999999999999999999999999999999865443
No 407
>2nnn_A Probable transcriptional regulator; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=78.63 E-value=1.9 Score=35.19 Aligned_cols=46 Identities=13% Similarity=0.109 Sum_probs=38.9
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSI 458 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~ 458 (473)
++..+...+++|..++|+.++++..-+...|...++.|+|.|..+.
T Consensus 43 iL~~l~~~~~~t~~ela~~l~~~~~tvs~~l~~L~~~glv~r~~~~ 88 (140)
T 2nnn_A 43 ALVRLGETGPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADP 88 (140)
T ss_dssp HHHHHHHHSSBCHHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEET
T ss_pred HHHHHHHcCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCC
Confidence 4444445578999999999999999999999999999999986443
No 408
>1jgs_A Multiple antibiotic resistance protein MARR; transcription regulation, DNA-binding, repressor, transcription; HET: SAL; 2.30A {Escherichia coli} SCOP: a.4.5.28
Probab=78.59 E-value=2.3 Score=34.73 Aligned_cols=45 Identities=16% Similarity=0.025 Sum_probs=38.1
Q ss_pred HHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCc
Q psy4132 414 YEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSI 458 (473)
Q Consensus 414 ~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~ 458 (473)
+..+...+++|..++|+.++++..-+...|...++.|+|.|..+.
T Consensus 40 L~~l~~~~~~~~~~la~~l~~~~~tvs~~l~~L~~~gli~r~~~~ 84 (138)
T 1jgs_A 40 LCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNP 84 (138)
T ss_dssp HHHHHHHSSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECT
T ss_pred HHHHHhcCCCCHHHHHHHHCCChHHHHHHHHHHHHCCCEEecCCc
Confidence 334444578999999999999999999999999999999986544
No 409
>3hsr_A HTH-type transcriptional regulator SARZ; helix-turn-helix, cysteine disulfide, MARR-family transcript regulator, DNA-binding; 1.90A {Staphylococcus aureus subsp} PDB: 3hse_A 3hrm_A 4gxo_A
Probab=78.32 E-value=1.4 Score=36.33 Aligned_cols=47 Identities=6% Similarity=0.029 Sum_probs=38.5
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++.++...+++|..++|+.++++..-+...+...+++|+|.|..+..
T Consensus 41 vL~~l~~~~~~t~~eLa~~l~~~~~tvs~~l~~L~~~Glv~r~~~~~ 87 (140)
T 3hsr_A 41 VLMAIENDEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEK 87 (140)
T ss_dssp HHHHSCTTCEEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC---
T ss_pred HHHHHHHcCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCeEecCCCC
Confidence 34444456789999999999999999999999999999999876544
No 410
>2vxz_A Pyrsv_GP04; viral protein, SSPF, ORF165A; 1.7A {Pyrobaculum spherical virus}
Probab=78.18 E-value=3.3 Score=34.78 Aligned_cols=45 Identities=13% Similarity=0.135 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCcc
Q psy4132 408 SFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLC 453 (473)
Q Consensus 408 ~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~ 453 (473)
.....+++++. .|+.|..++++.+|+|.+-|.-.|...|.+|.+-
T Consensus 11 erk~~ILE~Lk-~G~~~t~~Iak~LGlShg~aq~~Ly~LeREG~V~ 55 (165)
T 2vxz_A 11 VRLRDILALLA-DGCKTTSLIQQRLGLSHGRAKALIYVLEKEGRVT 55 (165)
T ss_dssp HHHHHHHHHHT-TCCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSCE
T ss_pred HHHHHHHHHHH-hCCccHHHHHHHhCCcHHHHHHHHHHHHhcCceE
Confidence 45577888998 8999999999999999999999999999999874
No 411
>2p5k_A Arginine repressor; DNA-binding domain, winged helix-turn-helix (WHTH), DNA binding protein; 1.00A {Bacillus subtilis} SCOP: a.4.5.3 PDB: 2p5l_C*
Probab=78.10 E-value=3.3 Score=28.93 Aligned_cols=50 Identities=16% Similarity=0.175 Sum_probs=38.2
Q ss_pred HHHHHHHhhCCCCCHHHHHHhh-----CCcHHHHHHHHHHHHHcCCccccCCccccccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLA-----SVSLVIAKHRLLLAETHGKLCRDQSIEGLRFY 464 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~-----~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~ 464 (473)
..+..++...+.+|+.|+++.+ ++|..-....|. +.|.+ +-....|..+|
T Consensus 8 ~~i~~ll~~~~~~t~~el~~~l~~~~~~vs~~Tv~R~L~---~lg~v-~~~~~~~~~~Y 62 (64)
T 2p5k_A 8 IKIREIITSNEIETQDELVDMLKQDGYKVTQATVSRDIK---ELHLV-KVPTNNGSYKY 62 (64)
T ss_dssp HHHHHHHHHSCCCSHHHHHHHHHHTTCCCCHHHHHHHHH---HHTCE-EEEETTTEEEE
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHhCCCcCHHHHHHHHH---HcCCE-EEecCCCceee
Confidence 4456677778899999999999 999999988888 55777 55445554444
No 412
>3cjn_A Transcriptional regulator, MARR family; silicibacter pomeroy structural genomics, PSI-2, protein structure initiative; 1.95A {Silicibacter pomeroyi dss-3}
Probab=77.96 E-value=2.2 Score=36.06 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=39.7
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.++.++...+++|..++|+.++++..-+...|...+++|+|.|..+..
T Consensus 56 ~iL~~l~~~~~~t~~ela~~l~is~~tvs~~l~~Le~~Gli~r~~~~~ 103 (162)
T 3cjn_A 56 RALAILSAKDGLPIGTLGIFAVVEQSTLSRALDGLQADGLVRREVDSD 103 (162)
T ss_dssp HHHHHHHHSCSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC--
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCChhHHHHHHHHHHHCCCEEecCCCC
Confidence 344555566889999999999999999999999999999999865443
No 413
>2nyx_A Probable transcriptional regulatory protein, RV14; alpha/beta, structural genomics, PSI-2; 2.30A {Mycobacterium tuberculosis}
Probab=77.89 E-value=1.9 Score=36.94 Aligned_cols=47 Identities=13% Similarity=-0.014 Sum_probs=39.2
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++.++...+++|..++|+.++++..-+...|...++.|+|.|..+..
T Consensus 50 iL~~L~~~~~~t~~eLa~~l~is~~tvs~~l~~Le~~GlV~r~~~~~ 96 (168)
T 2nyx_A 50 TLVILSNHGPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPT 96 (168)
T ss_dssp HHHHHHHHCSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSS
T ss_pred HHHHHHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEeccCCC
Confidence 33444455789999999999999999999999999999999865443
No 414
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=77.42 E-value=2.2 Score=36.15 Aligned_cols=48 Identities=6% Similarity=0.023 Sum_probs=40.7
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.++.++...+++|..++|+.++++..-+...|...|.+|+|.|..+..
T Consensus 50 ~iL~~l~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~ 97 (162)
T 3k0l_A 50 TALSVLAAKPNLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDPT 97 (162)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHTSCGGGHHHHHHHHHHTTSEEEEECCS
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCcCeEecCCCC
Confidence 344555566899999999999999999999999999999999865443
No 415
>1s3j_A YUSO protein; structural genomics, MARR transcriptional regulator family, PSI, protein structure initiative; HET: MSE; 2.25A {Bacillus subtilis} SCOP: a.4.5.28
Probab=77.22 E-value=1.7 Score=36.34 Aligned_cols=47 Identities=9% Similarity=0.033 Sum_probs=39.4
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++.++...+++|..++|+.++++..-+...|...++.|+|.|.....
T Consensus 42 iL~~l~~~~~~t~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~ 88 (155)
T 1s3j_A 42 VLASLKKHGSLKVSEIAERMEVKPSAVTLMADRLEQKNLIARTHNTK 88 (155)
T ss_dssp HHHHHHHHSEEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSS
T ss_pred HHHHHHHcCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeecCCCC
Confidence 33444445789999999999999999999999999999999876543
No 416
>2frh_A SARA, staphylococcal accessory regulator A; winged-helix protein, divalent metal binding, transcription; 2.50A {Staphylococcus aureus} SCOP: a.4.5.28 PDB: 2fnp_A 1fzp_D
Probab=76.86 E-value=3.3 Score=33.64 Aligned_cols=46 Identities=4% Similarity=-0.021 Sum_probs=38.3
Q ss_pred HHHHhhC--CCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 414 YEIVSQN--VFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 414 ~~~~~~~--~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
+.++... +++|..++|+.++++.+-+...|...+.+|+|.|..+..
T Consensus 43 L~~l~~~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~ 90 (127)
T 2frh_A 43 LTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEH 90 (127)
T ss_dssp HHHHHHTCCSEEEHHHHHHHSSSHHHHHHHHHHHHHHTTSSCCBCCSS
T ss_pred HHHHHhccCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCCCC
Confidence 3344344 789999999999999999999999999999999955443
No 417
>3u5c_Z RP45, S31, YS23, 40S ribosomal protein S25-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_V 3o30_Q 3o2z_Q 3u5g_Z
Probab=76.78 E-value=1.6 Score=34.64 Aligned_cols=50 Identities=16% Similarity=0.131 Sum_probs=44.5
Q ss_pred cHHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCcccc
Q psy4132 406 DASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRD 455 (473)
Q Consensus 406 ~~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d 455 (473)
|....+++.+-+....-||+.-++..+++..++|+..|..++.+|.|..=
T Consensus 43 Dk~t~dkl~KEVpk~KlITpsvlseRlkI~gSLAR~aLreL~~kGlIk~V 92 (108)
T 3u5c_Z 43 DQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPI 92 (108)
T ss_dssp TTHHHHHHHHHCSSCSSBSHHHHHHTTCCCTTHHHHHHHHHSSSSSCEEE
T ss_pred CHHHHHHHHHHccCCeEEeHHHhhhhhhhhHHHHHHHHHHHHHCCCEEEE
Confidence 56777888877777789999999999999999999999999999998743
No 418
>2eth_A Transcriptional regulator, putative, MAR family; MARR family, structural genomics, joint center for structura genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: a.4.5.28
Probab=76.30 E-value=3.1 Score=34.86 Aligned_cols=47 Identities=11% Similarity=0.042 Sum_probs=39.7
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSI 458 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~ 458 (473)
.++.++...+++|..++|+.++++..-+...|...++.|+|.|....
T Consensus 48 ~iL~~l~~~~~~t~~ela~~l~is~~tvs~~l~~Le~~Gli~r~~~~ 94 (154)
T 2eth_A 48 YAFLYVALFGPKKMKEIAEFLSTTKSNVTNVVDSLEKRGLVVREMDP 94 (154)
T ss_dssp HHHHHHHHHCCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEEECT
T ss_pred HHHHHHHHcCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCC
Confidence 34445555678999999999999999999999999999999986543
No 419
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=76.16 E-value=3.8 Score=32.30 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=37.9
Q ss_pred HHHHHhhCCCCCHHHHHHhh-CCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 413 TYEIVSQNVFVTVEQFSRLA-SVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~-~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
++..+. .+.++..|+++.+ ++|.......|...|+.|+|.|...
T Consensus 19 IL~~L~-~~~~~~~eLa~~l~~is~~tls~~L~~Le~~GlI~r~~~ 63 (107)
T 2hzt_A 19 ILXHLT-HGKKRTSELKRLMPNITQKMLTQQLRELEADGVINRIVY 63 (107)
T ss_dssp HHHHHT-TCCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHH-hCCCCHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEEeec
Confidence 444444 5789999999999 9999999999999999999998654
No 420
>3e6m_A MARR family transcriptional regulator; APC88769, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; 2.20A {Silicibacter pomeroyi}
Probab=76.02 E-value=2.1 Score=36.23 Aligned_cols=47 Identities=17% Similarity=0.052 Sum_probs=38.2
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++.++...+++|..++|+.++++..-+...|...|++|+|.|..+..
T Consensus 58 vL~~l~~~~~~t~~eLa~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~ 104 (161)
T 3e6m_A 58 LLSSLSAYGELTVGQLATLGVMEQSTTSRTVDQLVDEGLAARSISDA 104 (161)
T ss_dssp HHHHHHHHSEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC---
T ss_pred HHHHHHhCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCcc
Confidence 34444445789999999999999999999999999999999876544
No 421
>2g9w_A Conserved hypothetical protein; DNA-binding domain, bacterial transcription repressor, DNA B protein; 1.80A {Mycobacterium tuberculosis} SCOP: a.4.5.39
Probab=75.90 E-value=3.1 Score=34.46 Aligned_cols=54 Identities=11% Similarity=0.005 Sum_probs=41.9
Q ss_pred HHHHHHHhh-CCCCCHHHHHHhhC----CcHHHHHHHHHHHHHcCCccccCCccccccc
Q psy4132 411 EKTYEIVSQ-NVFVTVEQFSRLAS----VSLVIAKHRLLLAETHGKLCRDQSIEGLRFY 464 (473)
Q Consensus 411 ~~~~~~~~~-~~~ls~~e~a~~~~----~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~ 464 (473)
..++.++.. .+++|..|+++.++ |+.+-....|...+++|+|.|.......+|+
T Consensus 12 ~~vL~~L~~~~~~~t~~el~~~l~~~~~~~~~Tvt~~l~rLe~kGlv~r~~~~r~~~~~ 70 (138)
T 2g9w_A 12 RAVMDHLWSRTEPQTVRQVHEALSARRDLAYTTVMAVLQRLAKKNLVLQIRDDRAHRYA 70 (138)
T ss_dssp HHHHHHHHTCSSCEEHHHHHHHHTTTCCCCHHHHHHHHHHHHHTTSEEEEC---CCEEE
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHhccCCCCHHHHHHHHHHHHHCCCEEEEecCCeEEEE
Confidence 345666666 58999999999997 8999999999999999999997653333444
No 422
>1z91_A Organic hydroperoxide resistance transcriptional; OHRR, MARR family, bacterial transcription factor, DNA bindi protein; 2.50A {Bacillus subtilis} SCOP: a.4.5.28 PDB: 1z9c_A*
Probab=75.78 E-value=2.3 Score=35.18 Aligned_cols=47 Identities=17% Similarity=0.135 Sum_probs=39.3
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++..+...+++|..++|+.++++..-+...|...++.|+|.|.....
T Consensus 45 iL~~l~~~~~~~~~~la~~l~~~~~tvs~~l~~L~~~glv~r~~~~~ 91 (147)
T 1z91_A 45 ALLLLWEHETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEE 91 (147)
T ss_dssp HHHHHHHHSEEEHHHHHHTTTCCHHHHHHHHHHHHHHTSEECCBCSS
T ss_pred HHHHHHHCCCCCHHHHHHHHCCCcCcHHHHHHHHHHCCCEEeccCCC
Confidence 34444445689999999999999999999999999999999865543
No 423
>1sd4_A Penicillinase repressor; BLAI, MECI, methicillin, B-lactam, DNA binding PR; 2.00A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1xsd_A
Probab=75.30 E-value=2 Score=34.71 Aligned_cols=47 Identities=13% Similarity=-0.014 Sum_probs=39.8
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhC----CcHHHHHHHHHHHHHcCCccccCC
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLAS----VSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~----~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
..++.++...+++|..|+++.++ |+.+-....|...|++|+|.|...
T Consensus 13 ~~vL~~L~~~~~~t~~el~~~l~~~~~~~~~Tvt~~l~rLe~kGlv~R~~~ 63 (126)
T 1sd4_A 13 WDVMNIIWDKKSVSANEIVVEIQKYKEVSDKTIRTLITRLYKKEIIKRYKS 63 (126)
T ss_dssp HHHHHHHHHSSSEEHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHhcCCCCHHHHHHHHhhcCCCChhhHHHHHHHHHHCCceEEEeC
Confidence 34555666678999999999996 789999999999999999998764
No 424
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=75.20 E-value=3 Score=35.61 Aligned_cols=47 Identities=15% Similarity=0.078 Sum_probs=37.3
Q ss_pred HHHHHhh-CCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIVSQ-NVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~~~-~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++.++.. .+++|..++|+.++++..-+...|...|++|+|.|..+..
T Consensus 58 vL~~L~~~~~~~t~~eLa~~l~i~~~tvs~~l~~Le~~GlV~r~~~~~ 105 (166)
T 3deu_A 58 TLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQTCAS 105 (166)
T ss_dssp HHHHHHHSCSSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC----
T ss_pred HHHHHHHcCCCCCHHHHHHHHCCCHhhHHHHHHHHHHCCCEEeeCCCC
Confidence 3334444 5789999999999999999999999999999999876543
No 425
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=75.08 E-value=5.4 Score=27.60 Aligned_cols=44 Identities=16% Similarity=0.176 Sum_probs=37.7
Q ss_pred HHHHHHHhhCCC-CCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 411 EKTYEIVSQNVF-VTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 411 ~~~~~~~~~~~~-ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
..+++++..+++ +....|+..++++-......|...+++|.+..
T Consensus 13 ~~lL~yIr~sGGildI~~~a~kygV~kdeV~~~LrrLe~KGLI~l 57 (59)
T 2xvc_A 13 RELLDYIVNNGGFLDIEHFSKVYGVEKQEVVKLLEALKNKGLIAV 57 (59)
T ss_dssp HHHHHHHHHTTSEEEHHHHHHHHCCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHcCCEEeHHHHHHHhCCCHHHHHHHHHHHHHCCCeec
Confidence 456777776654 89999999999999999999999999998753
No 426
>2vn2_A DNAD, chromosome replication initiation protein; DNA replication, primosome; 2.3A {Geobacillus kaustophilus HTA426}
Probab=74.89 E-value=5.9 Score=32.44 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=33.7
Q ss_pred CCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 421 VFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 421 ~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
...|+.++|..++++..-....|...+.+|+|.|...
T Consensus 50 ~~ps~~~LA~~l~~s~~~V~~~l~~Le~kGlI~~~~~ 86 (128)
T 2vn2_A 50 LFPTPAELAERMTVSAAECMEMVRRLLQKGMIAIEEH 86 (128)
T ss_dssp SSCCHHHHHHTSSSCHHHHHHHHHHHHHTTSSEECC-
T ss_pred CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEeE
Confidence 4589999999999999999999999999999998543
No 427
>2bv6_A MGRA, HTH-type transcriptional regulator MGRA; multidrug resistance regulator, virulence determinant, transcriptional factors; 2.8A {Staphylococcus aureus} SCOP: a.4.5.28
Probab=74.75 E-value=1.6 Score=35.98 Aligned_cols=48 Identities=15% Similarity=0.034 Sum_probs=40.5
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCccc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEG 460 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g 460 (473)
++.++...+++|..++|+.++++..-+...|...++.|+|.|..+..+
T Consensus 42 iL~~l~~~~~~~~~ela~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d 89 (142)
T 2bv6_A 42 VLTILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVD 89 (142)
T ss_dssp HHHHHHHSSEEEHHHHHHHTTCCTTTHHHHHHHHHHTTSEEEEECSSS
T ss_pred HHHHHHHcCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeecCCCC
Confidence 444555567899999999999999999999999999999998665443
No 428
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=74.72 E-value=3.7 Score=32.40 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=34.4
Q ss_pred hhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCcccc
Q psy4132 418 SQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRD 455 (473)
Q Consensus 418 ~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d 455 (473)
.....+|..++|+.+|+|-.-..+.|...+..|+|.+.
T Consensus 29 ~~g~~~s~~eLa~~lgvs~~tV~~~L~~L~~~GlV~~~ 66 (110)
T 1q1h_A 29 DKGTEMTDEEIANQLNIKVNDVRKKLNLLEEQGFVSYR 66 (110)
T ss_dssp HHCSCBCHHHHHHTTTSCHHHHHHHHHHHHHHTSCEEE
T ss_pred HcCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEE
Confidence 34447999999999999999999999999999999876
No 429
>2fbi_A Probable transcriptional regulator; MARR, APC5816, structural genomic protein structure initiative; 2.10A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=74.44 E-value=2.2 Score=34.90 Aligned_cols=46 Identities=17% Similarity=0.034 Sum_probs=39.0
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSI 458 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~ 458 (473)
++..+...+++|..++|+.++++..-+...|...++.|+|.|....
T Consensus 41 iL~~l~~~~~~t~~ela~~l~~s~~~vs~~l~~Le~~glv~r~~~~ 86 (142)
T 2fbi_A 41 VIRILRQQGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAP 86 (142)
T ss_dssp HHHHHHHHCSEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEET
T ss_pred HHHHHHHcCCCCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeecCC
Confidence 4444445578999999999999999999999999999999986543
No 430
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=73.55 E-value=11 Score=30.67 Aligned_cols=34 Identities=3% Similarity=-0.089 Sum_probs=28.9
Q ss_pred CCCHHHHHHHHHHhccCCCCCeeHHhhhccceeee
Q psy4132 366 LLSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVLQ 400 (473)
Q Consensus 366 ~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl~ 400 (473)
.+|..++.-+|..+ ..+...|+|++|..+|.-+.
T Consensus 61 ~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~lA 94 (125)
T 1pul_A 61 AITGTMTGIAFSKV-TGPKKKATFDETKKVLAFVA 94 (125)
T ss_dssp SSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHHH
T ss_pred CCCccccceeehcc-cCCcceecHHHHHHHHHHHH
Confidence 58899999999999 77778999999998887443
No 431
>1uly_A Hypothetical protein PH1932; helix-turn-helix, structural genomics, DNA binding protein; 2.50A {Pyrococcus horikoshii} SCOP: a.4.5.58 PDB: 2cwe_A
Probab=72.96 E-value=4.6 Score=35.75 Aligned_cols=44 Identities=16% Similarity=0.164 Sum_probs=39.9
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCcccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRD 455 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d 455 (473)
.+++.++. ++++|..|+|+.+++|..-+..+|...++.|.|.|.
T Consensus 23 ~~IL~~L~-~~~~s~~eLA~~lglS~stv~~~l~~Le~~GlI~~~ 66 (192)
T 1uly_A 23 RKILKLLR-NKEMTISQLSEILGKTPQTIYHHIEKLKEAGLVEVK 66 (192)
T ss_dssp HHHHHHHT-TCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHH-cCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEE
Confidence 45677777 589999999999999999999999999999999986
No 432
>3iz6_V 40S ribosomal protein S25 (S25E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=72.86 E-value=1.5 Score=34.86 Aligned_cols=51 Identities=16% Similarity=0.118 Sum_probs=43.3
Q ss_pred cHHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 406 DASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 406 ~~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
|....+++.+-+....-||+..++..+++..++|+..|+.++.+|.|..=.
T Consensus 44 Dk~t~dkl~KEVpk~KlITpsvlseRlkI~gSLAR~aLreL~~kGlIk~V~ 94 (108)
T 3iz6_V 44 DKATYDKLLSEVPKYKQITPSVLSERLRINGSLARQAIKDLESRGAIRVVS 94 (108)
T ss_dssp SSHHHHHHHHHHHHHSSEEEHHHHHHHHTCCHHHHHHHHHHHHHHTSCEEC
T ss_pred CHHHHHHHHHHccCCeEEeHHHHHhhhcccHHHHHHHHHHHHHCCCEEEEe
Confidence 345667777666667899999999999999999999999999999997543
No 433
>2pg4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, DNA binding protein; HET: MSE CIT; 2.21A {Aeropyrum pernix} SCOP: a.4.5.48
Probab=72.65 E-value=4.2 Score=31.13 Aligned_cols=42 Identities=7% Similarity=-0.134 Sum_probs=36.0
Q ss_pred HHHHhhCC-CCCHHHHHHhhCCcHHH-HHHHHHHHHHcCCcccc
Q psy4132 414 YEIVSQNV-FVTVEQFSRLASVSLVI-AKHRLLLAETHGKLCRD 455 (473)
Q Consensus 414 ~~~~~~~~-~ls~~e~a~~~~~s~~~-~~~~l~~~~~~g~l~~d 455 (473)
+.++...+ ++|..++|+.++++..- +...|...|+.|+|.+|
T Consensus 21 L~~l~~~~~~~t~~eLa~~l~is~~t~vs~~l~~Le~~Glv~~~ 64 (95)
T 2pg4_A 21 LLEFEKKGYEPSLAEIVKASGVSEKTFFMGLKDRLIRAGLVKEE 64 (95)
T ss_dssp HHHHHHTTCCCCHHHHHHHHCCCHHHHHTTHHHHHHHTTSEEEE
T ss_pred HHHHHhcCCCCCHHHHHHHHCCCchHHHHHHHHHHHHCCCeecC
Confidence 33444555 89999999999999999 99999999999999843
No 434
>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum} SCOP: a.4.5.0
Probab=72.36 E-value=3 Score=34.65 Aligned_cols=39 Identities=10% Similarity=-0.021 Sum_probs=28.0
Q ss_pred CCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 421 VFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 421 ~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
+++|..++|+.++++.+-+...|...+++|+|.|..+..
T Consensus 56 ~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~ 94 (148)
T 3jw4_A 56 SGIIQKDLAQFFGRRGASITSMLQGLEKKGYIERRIPEN 94 (148)
T ss_dssp TCCCHHHHHHC------CHHHHHHHHHHTTSBCCC----
T ss_pred CCCCHHHHHHHHCCChhHHHHHHHHHHHCCCEEeeCCCC
Confidence 789999999999999999999999999999999876544
No 435
>3bja_A Transcriptional regulator, MARR family, putative; NP_978771.1, putative MARR-like transcription regulator, MAR structural genomics; 2.38A {Bacillus cereus}
Probab=72.09 E-value=2.2 Score=34.81 Aligned_cols=47 Identities=4% Similarity=0.037 Sum_probs=39.7
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSI 458 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~ 458 (473)
.++.++...+++|..++|+.++++..-+...|...++.|+|.|....
T Consensus 37 ~iL~~l~~~~~~~~~ela~~l~~~~~tvs~~l~~L~~~gli~r~~~~ 83 (139)
T 3bja_A 37 GVIQVLAKSGKVSMSKLIENMGCVPSNMTTMIQRMKRDGYVMTEKNP 83 (139)
T ss_dssp HHHHHHHHSCSEEHHHHHHHCSSCCTTHHHHHHHHHHTTSEEEEECS
T ss_pred HHHHHHHHcCCcCHHHHHHHHCCChhHHHHHHHHHHHCCCeeeccCC
Confidence 34455556788999999999999999999999999999999985433
No 436
>2dk5_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, winged helix domain, NPPSFA; NMR {Homo sapiens} SCOP: a.4.5.85
Probab=71.92 E-value=8.3 Score=29.60 Aligned_cols=52 Identities=12% Similarity=0.079 Sum_probs=41.9
Q ss_pred HHHHHHHhh--CCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc--cCCccccc
Q psy4132 411 EKTYEIVSQ--NVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR--DQSIEGLR 462 (473)
Q Consensus 411 ~~~~~~~~~--~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~--d~~~~g~~ 462 (473)
..++.++.. +.+++..+++...+++.......|...|.+|+|-| +.....-+
T Consensus 23 ~~Vl~~I~~~g~~gi~qkeLa~~~~l~~~tvt~iLk~LE~kglIkr~~~~~~~~rK 78 (91)
T 2dk5_A 23 KLVYQIIEDAGNKGIWSRDVRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKK 78 (91)
T ss_dssp HHHHHHHHHHCTTCEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEECCSSCSSCC
T ss_pred HHHHHHHHHcCCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecCCCCCCcE
Confidence 345666666 56999999999999999999999999999999984 44433433
No 437
>3fm5_A Transcriptional regulator; MCSG, PF04017, PSI, MARR, structu genomics, protein structure initiative, midwest center for structural genomics; HET: GOL; 2.00A {Rhodococcus jostii}
Probab=71.33 E-value=4.9 Score=33.32 Aligned_cols=41 Identities=12% Similarity=-0.058 Sum_probs=33.7
Q ss_pred hCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 419 QNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 419 ~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
..+++|..++|+.++++..-+...|...|++|+|.|..+..
T Consensus 51 ~~~~~t~~eLa~~l~i~~~tvs~~l~~Le~~Glv~r~~~~~ 91 (150)
T 3fm5_A 51 QAEGVNQRGVAATMGLDPSQIVGLVDELEERGLVVRTLDPS 91 (150)
T ss_dssp STTCCCSHHHHHHHTCCHHHHHHHHHHHHTTTSEEC-----
T ss_pred CCCCcCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeeCCcc
Confidence 34579999999999999999999999999999999866544
No 438
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=71.04 E-value=7.9 Score=40.22 Aligned_cols=32 Identities=13% Similarity=-0.075 Sum_probs=29.0
Q ss_pred CCCHHHHHHHHHHhccCCCCCeeHHhhhccce
Q psy4132 366 LLSPEDLLNSCLALDKLPDSPIYLKTYSSGVK 397 (473)
Q Consensus 366 ~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~ 397 (473)
.++.+.+.++....|.++||.++.+||.-++.
T Consensus 487 ~Lp~~~L~~IW~l~D~~~~g~L~~~eF~~am~ 518 (550)
T 2qpt_A 487 KLPNSVLGRIWKLSDVDRDGMLDDEEFALASH 518 (550)
T ss_dssp TCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHH
T ss_pred CCCHHHHHHHhcccCCCCCCcCCHHHHHHHHH
Confidence 38899999999999999999999999986665
No 439
>3f6v_A Possible transcriptional regulator, ARSR family protein; probable transcriptional repressor ARSR family, structural genomics, PSI-2; 1.48A {Rhodococcus SP}
Probab=70.94 E-value=2.9 Score=35.53 Aligned_cols=47 Identities=11% Similarity=0.070 Sum_probs=40.4
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 409 FVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 409 ~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
...+|+.++. .+.+|..+||+.+++|..-+...|...++.|+|.+..
T Consensus 59 ~R~~IL~~L~-~~~~t~~eLa~~lgls~stvs~hL~~L~~aGlV~~~~ 105 (151)
T 3f6v_A 59 TRRRLVQLLT-SGEQTVNNLAAHFPASRSAISQHLRVLTEAGLVTPRK 105 (151)
T ss_dssp HHHHHHHHGG-GCCEEHHHHHTTSSSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHH-hCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEe
Confidence 3455666776 5789999999999999999999999999999998754
No 440
>2b0l_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, winged HTH motif.; 2.90A {Bacillus subtilis} SCOP: a.4.5.66
Probab=70.84 E-value=2 Score=33.86 Aligned_cols=47 Identities=13% Similarity=0.174 Sum_probs=37.5
Q ss_pred HHHHHHHHhhCCCC-CHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 410 VEKTYEIVSQNVFV-TVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 410 ~~~~~~~~~~~~~l-s~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
...|...+.....+ |..++|+.+++|..-+++.|...+..|+|.+..
T Consensus 30 ~~~I~~~l~~g~~lps~~eLa~~lgVSr~tVr~al~~L~~~GlI~~~~ 77 (102)
T 2b0l_A 30 IEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRS 77 (102)
T ss_dssp HHHHTTSSBTTEEEECHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHhhhcCCCcCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEe
Confidence 34444334344456 999999999999999999999999999998755
No 441
>3f3x_A Transcriptional regulator, MARR family, putative; DNA binding protein, DNA-binding, transcription regulation; 1.90A {Sulfolobus solfataricus}
Probab=70.83 E-value=3.6 Score=33.87 Aligned_cols=47 Identities=11% Similarity=0.006 Sum_probs=39.0
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.++..+...++ |..++|+.++++.+-+...|...|+.|+|.|..+..
T Consensus 41 ~iL~~l~~~~~-~~~~la~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~ 87 (144)
T 3f3x_A 41 SILKATSEEPR-SMVYLANRYFVTQSAITAAVDKLEAKGLVRRIRDSK 87 (144)
T ss_dssp HHHHHHHHSCE-EHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETT
T ss_pred HHHHHHHHCCC-CHHHHHHHHCCChhHHHHHHHHHHHCCCEEeccCCC
Confidence 34445555666 999999999999999999999999999999865443
No 442
>2v7f_A RPS19, RPS19E SSU ribosomal protein S19E; diamond blackfan anemia small ribosomal subunit; 1.15A {Pyrococcus abyssi} SCOP: a.4.5.84
Probab=70.81 E-value=8.2 Score=32.67 Aligned_cols=89 Identities=15% Similarity=0.070 Sum_probs=58.0
Q ss_pred CCHHHHHHHHHHhccCCCCCeeHHhhhccceeeeecc---cCcHHHHHHHHHHHhh---CCCCCHHHHHHhhC-------
Q psy4132 367 LSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVLQLKS---CEDASFVEKTYEIVSQ---NVFVTVEQFSRLAS------- 433 (473)
Q Consensus 367 ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl~~~~---~~~~~~~~~~~~~~~~---~~~ls~~e~a~~~~------- 433 (473)
+.++++...+..+=+ ..|+|..-+|...++.-.... .++..+..++...+.. .+.....++|..+|
T Consensus 7 v~~~~~i~~~a~~lk-~~~ki~~P~w~~~vKt~~~ke~~p~~~~~~y~ria~~lr~~i~~g~~G~~~La~~~gg~k~~g~ 85 (150)
T 2v7f_A 7 VPGDLLVERVAQRLK-EIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYLDGPVGIERLRTYYGGRKNRGH 85 (150)
T ss_dssp SCHHHHHHHHHHHHT-TCTTCCCCSCGGGCCC------CHHHHTHHHHHHHHHHHHHHHHCSBCHHHHHHHHCC----CC
T ss_pred cCHHHHHHHHHHHHH-hcCCCCCcchhhhhcccccccCCCCCcchHHHHHHHHHHHHHHhCCCCHHHHHHHHCCCccCCc
Confidence 667777776655444 367888777776654211111 1112333444433322 23566699999999
Q ss_pred -------CcHHHHHHHHHHHHHcCCccccC
Q psy4132 434 -------VSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 434 -------~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
+|-..+++-|..+|..|+|.+..
T Consensus 86 ~p~~~~~vSr~tVR~AL~~Le~~GlV~~~~ 115 (150)
T 2v7f_A 86 APERFYKAGGSIIRKALQQLEAAGFVEKVP 115 (150)
T ss_dssp CTTSCCCHHHHHHHHHHHHHHHTTSEEEET
T ss_pred CCccccccchHHHHHHHHHHHHCCCEEEeC
Confidence 99999999999999999998764
No 443
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=70.60 E-value=3.7 Score=33.88 Aligned_cols=66 Identities=9% Similarity=0.137 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcchhccC------CHHHHHHHHHhcC--CCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQ------NPLVQRVIDIFDE--DRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~------~~~~~~l~~~~D~--d~dG~I~~~EF~~~l~~~ 301 (473)
.....+.+.++|..||++++|+|+..+|..+..... .+.... +..+|. ..+++|.|-+.+.++.+.
T Consensus 38 ~~~dl~~F~~~W~~fDP~aTg~I~~~~L~~ll~~L~pPLgi~kpnr~~-L~~mniPl~~g~~Vhf~dvL~ALtr~ 111 (129)
T 2kav_A 38 SEDDFEMFYEVWEKFDPDATQFIEFAKLSDFADALDPPLLIAKPNKVQ-LIAMDLPMVSGDRIHCLDILFAFTKR 111 (129)
T ss_dssp CHHHHHHHHHHHHHHCTTCCCEECGGGHHHHHHHSCTTSCCCTTCCHH-HHHTCCCEETTTEEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCceEEeHHHHHHHHHhCCccccCCCccHHH-HHHcCCccCCCCEEeHHHHHHHHHHH
Confidence 345566677788899999999999999988522111 121112 335553 345688888887777654
No 444
>1z7u_A Hypothetical protein EF0647; winged-helix-turn-helix, MARR, structural genomics, PSI, Pro structure initiative; 2.20A {Enterococcus faecalis} SCOP: a.4.5.69
Probab=70.50 E-value=5 Score=31.87 Aligned_cols=45 Identities=16% Similarity=0.093 Sum_probs=38.2
Q ss_pred HHHHHhhCCCCCHHHHHHhh-CCcHHHHHHHHHHHHHcCCccccCCc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLA-SVSLVIAKHRLLLAETHGKLCRDQSI 458 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~-~~s~~~~~~~l~~~~~~g~l~~d~~~ 458 (473)
++..+.. +.++..++++.+ +++.......|...|+.|+|.|....
T Consensus 27 IL~~L~~-~~~~~~eLa~~l~~is~~tvs~~L~~Le~~GlI~r~~~~ 72 (112)
T 1z7u_A 27 LMDELFQ-GTKRNGELMRALDGITQRVLTDRLREMEKDGLVHRESFN 72 (112)
T ss_dssp HHHHHHH-SCBCHHHHHHHSTTCCHHHHHHHHHHHHHHTSEEEEEEC
T ss_pred HHHHHHh-CCCCHHHHHHHhccCCHHHHHHHHHHHHHCCCEEEeecC
Confidence 4444443 789999999999 99999999999999999999986543
No 445
>1okr_A MECI, methicillin resistance regulatory protein MECI; bacterial antibiotic resistance, MECI protein, transcriptional regulatory element; 2.4A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1sax_A 1sd7_A 2d45_A 1sd6_A
Probab=70.48 E-value=2.4 Score=34.10 Aligned_cols=46 Identities=9% Similarity=0.067 Sum_probs=39.1
Q ss_pred HHHHHHhhCCCCCHHHHHHhhC----CcHHHHHHHHHHHHHcCCccccCC
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLAS----VSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~----~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
.++.++...+++|..++++.++ ++.+-+...|...+++|+|.|...
T Consensus 14 ~vL~~l~~~~~~t~~ela~~l~~~~~~s~~tv~~~l~~L~~~Glv~r~~~ 63 (123)
T 1okr_A 14 EVMNIIWMKKYASANNIIEEIQMQKDWSPKTIRTLITRLYKKGFIDRKKD 63 (123)
T ss_dssp HHHHHHHHHSSEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHTSEEEEEE
T ss_pred HHHHHHHhCCCcCHHHHHHHHhccCCCcHhhHHHHHHHHHHCCCeEEEec
Confidence 3444554568899999999999 889999999999999999998754
No 446
>3kp7_A Transcriptional regulator TCAR; multiple drug resistance, biofilm, transcription regulation, binding, transcription regulator; 2.30A {Staphylococcus epidermidis RP62A} PDB: 3kp3_A* 3kp4_A* 3kp5_A* 3kp2_A* 3kp6_A
Probab=70.40 E-value=3 Score=34.73 Aligned_cols=41 Identities=12% Similarity=0.028 Sum_probs=36.8
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
++.++ ..+++|..++|+.++++.+-+...|...+.+|+|.|
T Consensus 43 iL~~l-~~~~~t~~eLa~~l~~~~~~vs~~l~~Le~~Glv~r 83 (151)
T 3kp7_A 43 VLNML-SIEALTVGQITEKQGVNKAAVSRRVKKLLNAELVKL 83 (151)
T ss_dssp HHHHH-HHSCBCHHHHHHHHCSCSSHHHHHHHHHHHTTSEEC
T ss_pred HHHHH-HcCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEe
Confidence 34444 568999999999999999999999999999999998
No 447
>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2
Probab=70.32 E-value=5.8 Score=36.46 Aligned_cols=45 Identities=18% Similarity=0.211 Sum_probs=38.9
Q ss_pred HHHHHHHhhC-CCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCcccc
Q psy4132 411 EKTYEIVSQN-VFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRD 455 (473)
Q Consensus 411 ~~~~~~~~~~-~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d 455 (473)
-.+++++... +++|..|+|+.+++|-.-+...|...++.|+|.++
T Consensus 11 l~iL~~l~~~~~~~~~~ela~~~gl~~stv~r~l~~L~~~G~v~~~ 56 (249)
T 1mkm_A 11 FEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRK 56 (249)
T ss_dssp HHHHHHHHHCSSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEC
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEEC
Confidence 3455555554 47999999999999999999999999999999998
No 448
>2fxa_A Protease production regulatory protein HPR; protease porduction, regulation, STR genomics, PSI, protein structure initiative; HET: PGE P6G 1PE; 2.40A {Bacillus subtilis} SCOP: a.4.5.28
Probab=69.39 E-value=3.6 Score=36.73 Aligned_cols=48 Identities=13% Similarity=0.048 Sum_probs=38.9
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCccc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEG 460 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g 460 (473)
++.++...+++|..++|+.++++..-+...|...|.+|+|.|..+...
T Consensus 53 iL~~L~~~~~~t~~eLa~~l~i~~stvs~~l~~Le~~GlV~r~~~~~D 100 (207)
T 2fxa_A 53 ILWIAYQLNGASISEIAKFGVMHVSTAFNFSKKLEERGYLRFSKRLND 100 (207)
T ss_dssp HHHHHHHHTSEEHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEECC---
T ss_pred HHHHHHHCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecCCCC
Confidence 344444457899999999999999999999999999999999765543
No 449
>2f2e_A PA1607; transcription factor, helix-TRUN-helix, APC5613, structural genomics, PSI, protein structure initiative; HET: GLC; 1.85A {Pseudomonas aeruginosa} SCOP: a.4.5.69
Probab=69.35 E-value=7.1 Score=32.72 Aligned_cols=44 Identities=14% Similarity=0.087 Sum_probs=37.7
Q ss_pred HHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 413 TYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
++..+. .+.++..||++.+++|-.....+|...|+.|+|.|...
T Consensus 29 IL~~L~-~g~~~~~eLa~~lgis~~tls~~L~~Le~~GlI~r~~~ 72 (146)
T 2f2e_A 29 IVRDAF-EGLTRFGEFQKSLGLAKNILAARLRNLVEHGVMVAVPA 72 (146)
T ss_dssp HHHHHH-TTCCSHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHH-hCCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 344443 57899999999999999999999999999999998653
No 450
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=69.18 E-value=4.6 Score=37.21 Aligned_cols=45 Identities=9% Similarity=0.116 Sum_probs=40.2
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCcccc
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRD 455 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d 455 (473)
..++..+..++++|..|+|+.++++..-+...|...++.|+|.|+
T Consensus 155 ~~IL~~L~~~~~~s~~eLA~~lglsksTv~r~L~~Le~~GlV~r~ 199 (244)
T 2wte_A 155 MKLLNVLYETKGTGITELAKMLDKSEKTLINKIAELKKFGILTQK 199 (244)
T ss_dssp HHHHHHHHHHTCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEe
Confidence 455666666789999999999999999999999999999999987
No 451
>3df8_A Possible HXLR family transcriptional factor; APC89000, structural genomics, midwest center for structural genomics, MCSG; 1.65A {Thermoplasma volcanium} SCOP: a.4.5.0
Probab=68.67 E-value=6.7 Score=31.15 Aligned_cols=44 Identities=14% Similarity=0.108 Sum_probs=36.5
Q ss_pred HHHHHhhCCCCC--HHHHHHhh-CCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 413 TYEIVSQNVFVT--VEQFSRLA-SVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 413 ~~~~~~~~~~ls--~~e~a~~~-~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
++..+. .+..+ +.|+++.+ ++|......+|...|+.|+|.|...
T Consensus 32 IL~~L~-~g~~~~~~~eL~~~l~gis~~~ls~~L~~Le~~GlV~r~~~ 78 (111)
T 3df8_A 32 IISVLG-NGSTRQNFNDIRSSIPGISSTILSRRIKDLIDSGLVERRSG 78 (111)
T ss_dssp HHHHHT-SSSSCBCHHHHHHTSTTCCHHHHHHHHHHHHHTTSEEEEES
T ss_pred HHHHHh-cCCCCCCHHHHHHHccCCCHHHHHHHHHHHHHCCCEEEeec
Confidence 334443 45555 99999999 9999999999999999999998755
No 452
>4a5n_A Uncharacterized HTH-type transcriptional regulato; activator, DNA binding, MARR-like; 1.81A {Bacillus subtilis} PDB: 4a5m_A
Probab=68.31 E-value=6.5 Score=32.46 Aligned_cols=40 Identities=18% Similarity=0.221 Sum_probs=36.3
Q ss_pred CCCCCHHHHHHhh-CCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 420 NVFVTVEQFSRLA-SVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 420 ~~~ls~~e~a~~~-~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.+..++.||++.+ ++|.......|...|+.|+|.|....+
T Consensus 37 ~g~~rf~eL~~~l~gIs~~~Ls~~L~~Le~~GLV~R~~~~~ 77 (131)
T 4a5n_A 37 DGKKRFNEFRRICPSITQRMLTLQLRELEADGIVHREVYHQ 77 (131)
T ss_dssp TSCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECS
T ss_pred cCCcCHHHHHHHhcccCHHHHHHHHHHHHHCCCEEEEecCC
Confidence 5789999999999 999999999999999999999875433
No 453
>3nqo_A MARR-family transcriptional regulator; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PG4; 2.20A {Clostridium difficile}
Probab=67.87 E-value=5.8 Score=34.66 Aligned_cols=40 Identities=15% Similarity=-0.014 Sum_probs=36.1
Q ss_pred CCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 420 NVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 420 ~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
.+++|..++|+.++++.+-+...|...+.+|+|.|..+..
T Consensus 55 ~~~~t~~eLa~~l~is~~tvs~~l~~Le~~GlV~r~~~~~ 94 (189)
T 3nqo_A 55 EEETTLNNIARKMGTSKQNINRLVANLEKNGYVDVIPSPH 94 (189)
T ss_dssp GGGCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSS
T ss_pred CCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeccCCC
Confidence 4689999999999999999999999999999999865543
No 454
>2v79_A DNA replication protein DNAD; primosome, DNA-binding protein; HET: DNA; 2.00A {Bacillus subtilis}
Probab=67.19 E-value=9.8 Score=31.52 Aligned_cols=36 Identities=25% Similarity=0.233 Sum_probs=33.7
Q ss_pred CCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCcccc
Q psy4132 420 NVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRD 455 (473)
Q Consensus 420 ~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d 455 (473)
....|+.++|+.++++..-+...|...+.+|+|.|.
T Consensus 49 ~~~ps~~~LA~~~~~s~~~v~~~L~~L~~KGlI~i~ 84 (135)
T 2v79_A 49 SYFPTPNQLQEGMSISVEECTNRLRMFIQKGFLFIE 84 (135)
T ss_dssp CCSCCHHHHHTTSSSCHHHHHHHHHHHHHHTSCEEE
T ss_pred CCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEE
Confidence 367899999999999999999999999999999983
No 455
>3boq_A Transcriptional regulator, MARR family; MARR famil structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=66.87 E-value=2.5 Score=35.62 Aligned_cols=47 Identities=9% Similarity=-0.023 Sum_probs=37.6
Q ss_pred HHHHH-hhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 413 TYEIV-SQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 413 ~~~~~-~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++.++ ...+++|..++|+.++++..-+...|...++.|+|.|.....
T Consensus 52 iL~~L~~~~~~~~~~ela~~l~i~~~tvs~~l~~Le~~Gli~r~~~~~ 99 (160)
T 3boq_A 52 AMAQLARNPDGLSMGKLSGALKVTNGNVSGLVNRLIKDGMVVKAMSAD 99 (160)
T ss_dssp HHHHHHHCTTCEEHHHHHHHCSSCCSCHHHHHHHHHHHTSEEEC----
T ss_pred HHHHHHHcCCCCCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeecCCC
Confidence 34444 456789999999999999999999999999999999976544
No 456
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=66.55 E-value=12 Score=30.29 Aligned_cols=39 Identities=5% Similarity=-0.033 Sum_probs=33.4
Q ss_pred CCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCc
Q psy4132 420 NVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSI 458 (473)
Q Consensus 420 ~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~ 458 (473)
.+.+|..++|+.+++|.....+.|...++.|+|....+.
T Consensus 24 ~~~~s~~ela~~~~i~~~~v~~il~~L~~~Glv~~~~g~ 62 (129)
T 2y75_A 24 EGPTSLKSIAQTNNLSEHYLEQLVSPLRNAGLVKSIRGA 62 (129)
T ss_dssp SCCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEC---
T ss_pred CCcCCHHHHHHHHCcCHHHHHHHHHHHHHCCceEecCCC
Confidence 357999999999999999999999999999998766443
No 457
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=66.33 E-value=8.2 Score=32.35 Aligned_cols=42 Identities=14% Similarity=0.045 Sum_probs=36.7
Q ss_pred hhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 418 SQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 418 ~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
...++++..++|+.++++.+-+...+...|.+|+|.|..++.
T Consensus 42 ~~~~~~~~~eLa~~l~~~~~tvs~~v~~Le~~GlV~R~~~~~ 83 (151)
T 4aik_A 42 RLPPEQSQIQLAKAIGIEQPSLVRTLDQLEEKGLITRHTSAN 83 (151)
T ss_dssp HSCTTSCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSS
T ss_pred HcCCCCcHHHHHHHHCcCHHHHHHHHHHHHhCCCeEeecCCC
Confidence 345678999999999999999999999999999999865444
No 458
>1yyv_A Putative transcriptional regulator; reductive methylation, D lysine, structural genomics, PSI; HET: MLY; 2.35A {Salmonella typhimurium} SCOP: a.4.5.69
Probab=65.74 E-value=5.6 Score=32.73 Aligned_cols=46 Identities=17% Similarity=0.072 Sum_probs=38.8
Q ss_pred HHHHHHhhCCCCCHHHHHHhh-CCcHHHHHHHHHHHHHcCCccccCCc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLA-SVSLVIAKHRLLLAETHGKLCRDQSI 458 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~-~~s~~~~~~~l~~~~~~g~l~~d~~~ 458 (473)
.++..+. .+.++..|+++.+ +++.......|...|+.|+|.|....
T Consensus 39 ~IL~~L~-~g~~~~~eLa~~l~gis~~tls~~L~~Le~~GlV~r~~~~ 85 (131)
T 1yyv_A 39 LILVALR-DGTHRFSDLRRXMGGVSEXMLAQSLQALEQDGFLNRVSYP 85 (131)
T ss_dssp HHHHHGG-GCCEEHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHH-cCCCCHHHHHHHhccCCHHHHHHHHHHHHHCCcEEEEecC
Confidence 3444554 5789999999999 79999999999999999999986543
No 459
>2fsw_A PG_0823 protein; alpha-beta structure, helix-turn-helix, winged-helix-turn-HE structural genomics, PSI, protein structure initiative; HET: MSE; 2.16A {Porphyromonas gingivalis} SCOP: a.4.5.69
Probab=65.31 E-value=6 Score=31.07 Aligned_cols=45 Identities=11% Similarity=0.076 Sum_probs=37.6
Q ss_pred HHHHHhhCCCCCHHHHHHhh-CCcHHHHHHHHHHHHHcCCccccCCc
Q psy4132 413 TYEIVSQNVFVTVEQFSRLA-SVSLVIAKHRLLLAETHGKLCRDQSI 458 (473)
Q Consensus 413 ~~~~~~~~~~ls~~e~a~~~-~~s~~~~~~~l~~~~~~g~l~~d~~~ 458 (473)
++..+. .+.++..|+++.+ +++.......|...|+.|+|.|....
T Consensus 30 IL~~L~-~~~~~~~eL~~~l~gis~~~ls~~L~~Le~~GlV~r~~~~ 75 (107)
T 2fsw_A 30 IIFQIN-RRIIRYGELKRAIPGISEKMLIDELKFLCGKGLIKKKQYP 75 (107)
T ss_dssp HHHHHT-TSCEEHHHHHHHSTTCCHHHHHHHHHHHHHTTSEEEEEEC
T ss_pred HHHHHH-hCCcCHHHHHHHcccCCHHHHHHHHHHHHHCCCEEEeecC
Confidence 334444 5789999999999 59999999999999999999986543
No 460
>2xzm_T RPS19E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_T
Probab=65.18 E-value=52 Score=27.74 Aligned_cols=89 Identities=9% Similarity=0.109 Sum_probs=67.9
Q ss_pred CCHHHHHHHHHHhccCCCCCeeHHhhhccceee---eecccCcHHHHHHHHHHHhh---CCCCCHHHHHHhhC-------
Q psy4132 367 LSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVL---QLKSCEDASFVEKTYEIVSQ---NVFVTVEQFSRLAS------- 433 (473)
Q Consensus 367 ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl---~~~~~~~~~~~~~~~~~~~~---~~~ls~~e~a~~~~------- 433 (473)
++++++.+.+..+=+ ..|+|..-+|...++.- .+...++..+.-+..+++.. .+++....+...+|
T Consensus 13 V~a~~fI~~~A~~LK-k~gki~~P~W~d~vKTg~~KElaP~d~DW~YiRaASi~R~lYlrg~vGV~~lrk~YGg~krrG~ 91 (155)
T 2xzm_T 13 VAAADFIREYASHLK-KANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKVYLKPHTGISTLKHIFGSNKDRGN 91 (155)
T ss_dssp SCHHHHHHHHHHHTT-SSCCSCCCHHHHSCCCSSSCSSCCSSTTHHHHHHHHHHHHHHHSTTCCHHHHHHHTCCEECCSS
T ss_pred cCHHHHHHHHHHHHH-hcCCCCCCchHhhhhccccccCCCCCCchHHHHHHHHHHHHhccCCCCHHHHHHHHCCCCCCCC
Confidence 778888887766555 37899999988777622 23344456666666666655 67899999999996
Q ss_pred -------CcHHHHHHHHHHHHHcCCccccC
Q psy4132 434 -------VSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 434 -------~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
-|-.+++..|+.+|..|+|-.|.
T Consensus 92 ~P~h~~~asg~iiR~~LQqLE~~g~Vek~~ 121 (155)
T 2xzm_T 92 LRNKHQACHGKILRWALKSLEDLKIIRKDK 121 (155)
T ss_dssp SCCEECCCCHHHHHHHHHHHHHTTSEEECS
T ss_pred CCCcccCCCcHHHHHHHHHHHHCCCEeecC
Confidence 47899999999999999998864
No 461
>3htu_A Vacuolar protein-sorting-associated protein 25; ESCRT-II, ESCRT-III, VPS20, VPS25, MVB, cytoplasm, nucleus, polymorphism, protein transport; 2.00A {Homo sapiens}
Probab=64.97 E-value=15 Score=27.35 Aligned_cols=61 Identities=13% Similarity=0.119 Sum_probs=47.5
Q ss_pred cCcHHHHHHHHHHHhhCC----CCCHHHHHHh--------hCCcHHHHHHHHHHHHHcCCccc--cCCccccccc
Q psy4132 404 CEDASFVEKTYEIVSQNV----FVTVEQFSRL--------ASVSLVIAKHRLLLAETHGKLCR--DQSIEGLRFY 464 (473)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~----~ls~~e~a~~--------~~~s~~~~~~~l~~~~~~g~l~~--d~~~~g~~~~ 464 (473)
.++++....|++++..++ -+|.-|+.+- -|++..+.+..|...+.+|+... ++..+|++||
T Consensus 5 rspeeWa~~Iy~Wv~~~G~~~sV~TlyEL~~Gd~t~~~ef~gmd~~~L~kaL~~L~k~gkA~i~~~~~~~GVKFf 79 (79)
T 3htu_A 5 RRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDEATLLRALQALQQEHKAEIITVSDGRGVKFF 79 (79)
T ss_dssp CCHHHHHHHHHHHHHTTCCSCSEECHHHHHHSSTTTTSTTTTCCHHHHHHHHHHHHHTTSEEEECCTTSCEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCCceEEEeeeccCCCCCCCcccCCCHHHHHHHHHHHHHcCCEEEEecCCCceeeeC
Confidence 456778888888888754 4688888773 38899999999999999998773 4444688875
No 462
>1j5y_A Transcriptional regulator, biotin repressor famil; structural genomics, TM1602, BIOT repressor family, JCSG, conserved hypothetical protein; 2.30A {Thermotoga maritima} SCOP: a.4.5.1 d.94.2.1
Probab=64.83 E-value=11 Score=32.96 Aligned_cols=48 Identities=15% Similarity=0.127 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhhC-CCCCHHHHHHhhCCcHHHHHHHHHHHHHcCC-cccc
Q psy4132 408 SFVEKTYEIVSQN-VFVTVEQFSRLASVSLVIAKHRLLLAETHGK-LCRD 455 (473)
Q Consensus 408 ~~~~~~~~~~~~~-~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~-l~~d 455 (473)
....+++.++..+ +.+|..++|+.+++|..-+...|...++.|. +.+.
T Consensus 21 ~R~~~Il~~L~~~~~~~s~~eLa~~l~vS~~Ti~rdi~~L~~~G~~I~~~ 70 (187)
T 1j5y_A 21 ERLKSIVRILERSKEPVSGAQLAEELSVSRQVIVQDIAYLRSLGYNIVAT 70 (187)
T ss_dssp HHHHHHHHHHHHCSSCBCHHHHHHHHTSCHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHHHHcCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEE
Confidence 3456677788765 4599999999999999999999999999999 7663
No 463
>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A
Probab=64.48 E-value=6.4 Score=30.07 Aligned_cols=17 Identities=24% Similarity=0.475 Sum_probs=10.9
Q ss_pred cCCCCCceeHHHHHHHH
Q psy4132 210 NKDRDGKINFQEFCSIV 226 (473)
Q Consensus 210 D~d~dG~I~f~EF~~~~ 226 (473)
|.|+||.|+-.++..+.
T Consensus 24 DvNgDG~Vn~~D~~llk 40 (88)
T 4fl4_A 24 DVNDDGKVNSTDLTLLK 40 (88)
T ss_dssp CTTCSSCCSHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHH
Confidence 66666666666665543
No 464
>2o0y_A Transcriptional regulator; ICLR-family, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Rhodococcus SP}
Probab=63.61 E-value=5.2 Score=37.12 Aligned_cols=43 Identities=5% Similarity=0.010 Sum_probs=38.0
Q ss_pred CCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcccccccc
Q psy4132 420 NVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYE 465 (473)
Q Consensus 420 ~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~ 465 (473)
.+++|..|+|+.++++-.-+...|...++.|+|.+|.. | +|..
T Consensus 36 ~~~~~~~eia~~~gl~kstv~r~l~tL~~~G~v~~~~~--~-~Y~l 78 (260)
T 2o0y_A 36 HPTRSLKELVEGTKLPKTTVVRLVATMCARSVLTSRAD--G-SYSL 78 (260)
T ss_dssp BSSBCHHHHHHHHCCCHHHHHHHHHHHHHTTSEEECTT--S-CEEE
T ss_pred CCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECCC--C-eEEe
Confidence 46899999999999999999999999999999999853 4 5654
No 465
>3o2p_E Cell division control protein 53; ligase, cell cycle; 2.23A {Saccharomyces cerevisiae} PDB: 3o6b_B
Probab=63.41 E-value=5.5 Score=30.48 Aligned_cols=36 Identities=14% Similarity=0.037 Sum_probs=30.0
Q ss_pred HHHhhCCcHHHHHHHHHHHHHcCCccccCCccccccc
Q psy4132 428 FSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFY 464 (473)
Q Consensus 428 ~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~ 464 (473)
+...|.+++.+.+++|+.+.++++|.||+.. ...-|
T Consensus 51 l~~rF~p~~~~IKk~IE~LIekeYleR~~~~-~~y~Y 86 (88)
T 3o2p_E 51 SHQRFNAKVSMVKRAIDSLIQKGYLQRGDDG-ESYAY 86 (88)
T ss_dssp HTTTCCCCHHHHHHHHHHHHHTTSEEECTTS-SEEEE
T ss_pred HhccCCCCHHHHHHHHHHHHhhhHHhcCCCC-CeEEe
Confidence 4455899999999999999999999999876 54433
No 466
>2xrn_A HTH-type transcriptional regulator TTGV; DNA-binding protein, tetramer gene regulator, cooperative DN binding, multidrug binding protein; 2.90A {Pseudomonas putida} PDB: 2xro_A
Probab=62.83 E-value=6.6 Score=35.92 Aligned_cols=46 Identities=4% Similarity=-0.040 Sum_probs=39.0
Q ss_pred HHHHHHhhC-CCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 412 KTYEIVSQN-VFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 412 ~~~~~~~~~-~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
.+++++... +++|..|+|+.++++-.-+...|...++.|+|.|+..
T Consensus 10 ~iL~~l~~~~~~~s~~ela~~~gl~~stv~r~l~~L~~~G~v~~~~~ 56 (241)
T 2xrn_A 10 SIMRALGSHPHGLSLAAIAQLVGLPRSTVQRIINALEEEFLVEALGP 56 (241)
T ss_dssp HHHHHHHTCTTCEEHHHHHHHTTSCHHHHHHHHHHHHTTTSEEECGG
T ss_pred HHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCC
Confidence 345555444 4799999999999999999999999999999999743
No 467
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=60.54 E-value=37 Score=27.63 Aligned_cols=63 Identities=10% Similarity=0.128 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhhCCCCCCCccHHHHhcchh-c--c-----CCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 238 DIRRLGKRFRKLDLDNSGALSIDEFMSLPE-L--Q-----QNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 238 ~~~~l~~~F~~~D~d~~G~Is~~el~~l~~-~--~-----~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
..+....+|..+-.-+...++...|..+.. . . ....++-+|..+ ..+..+|+|++|..++..+
T Consensus 23 ~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~l 93 (125)
T 1pul_A 23 DVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVLAFV 93 (125)
T ss_dssp HHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHHHHH
Confidence 344444455555444446788888877521 1 1 123588899999 7778899999999998765
No 468
>1stz_A Heat-inducible transcription repressor HRCA homol; circe element, structural genomics, BSGC structure FUN NIH, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.51 d.110.2.3
Probab=59.82 E-value=14 Score=35.75 Aligned_cols=60 Identities=17% Similarity=0.239 Sum_probs=48.7
Q ss_pred HHHHHHH-----HHhhCCCCCHHHHHHhh--CCcHHHHHHHHHHHHHcCCccccCCcc-------ccccccccc
Q psy4132 409 FVEKTYE-----IVSQNVFVTVEQFSRLA--SVSLVIAKHRLLLAETHGKLCRDQSIE-------GLRFYENKF 468 (473)
Q Consensus 409 ~~~~~~~-----~~~~~~~ls~~e~a~~~--~~s~~~~~~~l~~~~~~g~l~~d~~~~-------g~~~~~n~~ 468 (473)
-...|++ +++..++++..++++.+ ++|..-++..|...|+.|+|.|--+.. |.+||...+
T Consensus 18 R~~~IL~~i~~~yl~~~~pV~s~~La~~~~l~VS~aTIRrDL~~LE~~GlL~r~HgsAgript~~g~r~yvd~l 91 (338)
T 1stz_A 18 RQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEM 91 (338)
T ss_dssp HHHHHHHHHHHHHHHHCSCBCHHHHHHHSCCCSCHHHHHHHHHHHHHTTSEECCSSCSCBEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccHHHHHHHhCCCCCHHHHHHHHHHHHHCCCEEEccCcceecCCcccchhhhhhh
Confidence 3344555 78888999999999999 999999999999999999999876544 456666544
No 469
>1bia_A BIRA bifunctional protein; transcription regulation; 2.30A {Escherichia coli} SCOP: a.4.5.1 b.34.1.1 d.104.1.2 PDB: 1bib_A* 1hxd_A* 2ewn_A*
Probab=59.39 E-value=14 Score=35.42 Aligned_cols=55 Identities=13% Similarity=0.084 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCccccc
Q psy4132 408 SFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLR 462 (473)
Q Consensus 408 ~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~ 462 (473)
....+++.++...+.+|..++|+.+++|..-....|...++.|.+.......|.+
T Consensus 5 ~r~~~Il~~L~~~~~~s~~eLa~~l~vS~~ti~r~l~~L~~~G~~i~~~~g~GY~ 59 (321)
T 1bia_A 5 TVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGKGYS 59 (321)
T ss_dssp HHHHHHHHHHTTSSCBCHHHHHHHHTSCHHHHHHHHHHHHHTTCCCEEETTTEEE
T ss_pred hHHHHHHHHHHcCCCcCHHHHHHHHCCCHHHHHHHHHHHHhCCCcEEEecCCCcE
Confidence 3456788888888899999999999999999999999999999886433333433
No 470
>2ccl_B Endo-1,4-beta-xylanase Y; cell adhesion, cohesin/dockerin complex, cellulosome, cohesi dockerin, scaffolding, cellulose degradation; 2.03A {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1ohz_B
Probab=59.12 E-value=10 Score=26.74 Aligned_cols=20 Identities=20% Similarity=0.267 Sum_probs=12.1
Q ss_pred HHHhcCCCCCcccHHHHHHH
Q psy4132 278 IDIFDEDRNGEVDFKEFIQG 297 (473)
Q Consensus 278 ~~~~D~d~dG~I~~~EF~~~ 297 (473)
+...|.|+||.|+-.+|..+
T Consensus 36 ~~~aDvn~DG~in~~D~~~l 55 (63)
T 2ccl_B 36 KARADVDKNGSINAADVLLL 55 (63)
T ss_dssp HHHHCTTCSSCCSHHHHHHH
T ss_pred hhhhccCCCCCccHHHHHHH
Confidence 44566666666666666543
No 471
>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A
Probab=57.85 E-value=9.6 Score=29.10 Aligned_cols=53 Identities=13% Similarity=0.158 Sum_probs=37.0
Q ss_pred hCCCCCCCccHHHHhcchh----ccCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhc
Q psy4132 249 LDLDNSGALSIDEFMSLPE----LQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 249 ~D~d~~G~Is~~el~~l~~----~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 301 (473)
=|.|++|.|+..++..+.. .......+.-+...|.|+||.|+-.++..+-..+
T Consensus 23 GDvNgDG~Vn~~D~~llk~yllg~~~~~~~~~~~~aADvNgDG~In~~D~~~lkkyL 79 (88)
T 4fl4_A 23 GDVNDDGKVNSTDLTLLKRYVLKAVSTLPSSKAEKNADVNRDGRVNSSDVTILSRYL 79 (88)
T ss_dssp TCTTCSSCCSHHHHHHHHHHHHTSSCCCSSHHHHHHHCTTCSSCCSHHHHHHHHHHH
T ss_pred ccCCCCCcCCHHHHHHHHHHHcCCCCCCchhhhhhhccccCCCCcCHHHHHHHHHHH
Confidence 3889999999999987522 1111111234668899999999999987665433
No 472
>3cuq_C Vacuolar protein-sorting-associated protein 25; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_C
Probab=57.52 E-value=26 Score=30.43 Aligned_cols=95 Identities=13% Similarity=0.063 Sum_probs=65.5
Q ss_pred CCCHHHHHHHHHHhccCCCCCeeHHhhhccceeeeecccCcHHHHHHHHHHHhhCC----CCCHHHHHHh--------hC
Q psy4132 366 LLSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVLQLKSCEDASFVEKTYEIVSQNV----FVTVEQFSRL--------AS 433 (473)
Q Consensus 366 ~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl~~~~~~~~~~~~~~~~~~~~~~----~ls~~e~a~~--------~~ 433 (473)
.++++.+..++..+-..+ .....+ ..-........+.++....|++++..+| -+|.-||..- -|
T Consensus 68 ~Ls~e~~~~il~~L~~~g--~aew~d--~~~~~~~I~Wrt~~eWa~~iy~wv~~~G~~~sV~TlyEL~~Gd~t~~~ef~g 143 (176)
T 3cuq_C 68 KLPVESIQIVLEELRKKG--NLEWLD--KSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHG 143 (176)
T ss_dssp ECCHHHHHHHHHHHHHHT--SEEECS--SSSSEEEECSSCHHHHHHHHHHHHHTTTCCSCEEEHHHHHHCTTTTTSTTTT
T ss_pred cCCHHHHHHHHHHHHhcC--Cceeec--CCCCEEEEEeCCHHHHHHHHHHHHHhcCCcCcEEEEeeeccCCCCCCCcccC
Confidence 488888888877664432 221110 0001223345667889999999998876 4688888875 48
Q ss_pred CcHHHHHHHHHHHHHcCCcc--ccCCccccccc
Q psy4132 434 VSLVIAKHRLLLAETHGKLC--RDQSIEGLRFY 464 (473)
Q Consensus 434 ~s~~~~~~~l~~~~~~g~l~--~d~~~~g~~~~ 464 (473)
+...+.++-|...+.+|+.- -++..+|+.|+
T Consensus 144 ld~~vL~kaL~~L~~~gKaql~~~~~~~GVKFf 176 (176)
T 3cuq_C 144 LDEATLLRALQALQQEHKAEIITVSDGRGVKFF 176 (176)
T ss_dssp CCHHHHHHHHHHHHHHTSEEECCTTTSCEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCeEEeecCCCCceeeC
Confidence 99999999999999999843 34445899885
No 473
>3u2r_A Regulatory protein MARR; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, helix-turn-helix; 2.20A {Planctomyces limnophilus}
Probab=57.37 E-value=5.2 Score=34.01 Aligned_cols=40 Identities=10% Similarity=-0.071 Sum_probs=33.1
Q ss_pred CCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 420 NVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 420 ~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
++++|..++|+.++++..-+...|...|.+|+|.|..+..
T Consensus 60 ~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~ 99 (168)
T 3u2r_A 60 PEGMATLQIADRLISRAPDITRLIDRLDDRGLVLRTRKPE 99 (168)
T ss_dssp TSCEEHHHHHHHC---CTHHHHHHHHHHHTTSEEEEEETT
T ss_pred CCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEeecCCCC
Confidence 4689999999999999999999999999999999865543
No 474
>2qvo_A Uncharacterized protein AF_1382; PSI, structural genomics, southeast collaboratory for structural genomics; 1.85A {Archaeoglobus fulgidus dsm 4304} PDB: 3o3k_A 3ov8_A
Probab=57.33 E-value=11 Score=28.66 Aligned_cols=30 Identities=7% Similarity=-0.088 Sum_probs=29.7
Q ss_pred CCHHHHHHhhCCcHHHHHHHHHHHHHcCCc
Q psy4132 423 VTVEQFSRLASVSLVIAKHRLLLAETHGKL 452 (473)
Q Consensus 423 ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l 452 (473)
+|..++|+.++++..-+...|...|..|+|
T Consensus 31 ~t~~eLa~~l~i~~~tvs~~l~~Le~~Glv 60 (95)
T 2qvo_A 31 VYIQYIASKVNSPHSYVWLIIKKFEEAKMV 60 (95)
T ss_dssp EEHHHHHHHSSSCHHHHHHHHHHHHHTTSE
T ss_pred cCHHHHHHHHCcCHHHHHHHHHHHHHCcCc
Confidence 999999999999999999999999999999
No 475
>3tdu_C Cullin-1, CUL-1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_C
Probab=56.59 E-value=6.9 Score=29.08 Aligned_cols=35 Identities=11% Similarity=-0.032 Sum_probs=29.2
Q ss_pred HHHhhCCcHHHHHHHHHHHHHcCCccccCCccccc
Q psy4132 428 FSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLR 462 (473)
Q Consensus 428 ~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~ 462 (473)
++..|.+++...+++|+...++++|.||+.-..+.
T Consensus 39 l~~rF~p~~~~IKk~IE~LIereYl~R~~~~~~~y 73 (77)
T 3tdu_C 39 LSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 73 (77)
T ss_dssp HTTTCCCCHHHHHHHHHHHHHTTSEEEETTEEEEE
T ss_pred HhCcCCCCHHHHHHHHHHHHhhhHhhcCCCCCceE
Confidence 34558999999999999999999999998754443
No 476
>2y3n_B Cellulosomal family-48 processive glycoside hydro; structrual protein-hydrolase complex, cellulosome; 1.90A {Bacteroides cellulosolvens}
Probab=56.52 E-value=12 Score=27.14 Aligned_cols=20 Identities=15% Similarity=0.182 Sum_probs=10.9
Q ss_pred HHhcCCCCCcccHHHHHHHH
Q psy4132 279 DIFDEDRNGEVDFKEFIQGV 298 (473)
Q Consensus 279 ~~~D~d~dG~I~~~EF~~~l 298 (473)
...|.|+||.|+-.+|..+-
T Consensus 38 ~~aDvN~DG~in~~D~~~l~ 57 (71)
T 2y3n_B 38 EKADLNNDGVINSDDAIILA 57 (71)
T ss_dssp CTTCTTCSSBCSHHHHHHHH
T ss_pred ccccccCCCcccHHHHHHHH
Confidence 44555666666655554443
No 477
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=56.45 E-value=22 Score=29.59 Aligned_cols=54 Identities=9% Similarity=0.055 Sum_probs=43.1
Q ss_pred HHHHHHHhh-CCCCCHHHHHHhh-----CCcHHHHHHHHHHHHHcCCccccCCccccccc
Q psy4132 411 EKTYEIVSQ-NVFVTVEQFSRLA-----SVSLVIAKHRLLLAETHGKLCRDQSIEGLRFY 464 (473)
Q Consensus 411 ~~~~~~~~~-~~~ls~~e~a~~~-----~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~ 464 (473)
..|++++.. .+.+|++|+.+.+ ++|..-.=..|...++.|.|.+-....|..+|
T Consensus 25 ~~Il~~L~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~~~~~Y 84 (145)
T 2fe3_A 25 HAILEYLVNSMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLVKELTYGDASSRF 84 (145)
T ss_dssp HHHHHHHHHCSSCCCHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEEECCTTSCCEE
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHhCCCCChhhHHHHHHHHHHCCCEEEEeeCCCceEE
Confidence 344555543 5689999999998 89999999999999999999988877774444
No 478
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=56.28 E-value=11 Score=32.53 Aligned_cols=66 Identities=8% Similarity=0.076 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHHhhCCCCCCCccHHHHhcchhccC------CHHHHHHHHHhcC--CCCCcccHHHHHHHHhhc
Q psy4132 235 MVVDIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQ------NPLVQRVIDIFDE--DRNGEVDFKEFIQGVSQF 301 (473)
Q Consensus 235 ~~~~~~~l~~~F~~~D~d~~G~Is~~el~~l~~~~~------~~~~~~l~~~~D~--d~dG~I~~~EF~~~l~~~ 301 (473)
.....+.+.+++..||++.+|+|...+|..+..... .+.. ..+..+|. ..+|+|.|-+.+.++...
T Consensus 15 ~~~dl~~F~~~W~~fDP~ATgfI~~~~L~~~l~~L~pPLg~~kPn~-~~L~~mdiPl~~~~~Vhf~dvL~ALtk~ 88 (168)
T 4dck_A 15 SEDDFDMFYEIWEKFDPEATQFIEYSVLSDFADALSEPLRIAKPNQ-ISLINMDLPMVSGDRIHCMDILFAFTKR 88 (168)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHSCTTTCCCSSCH-HHHHHSCCEEETTTEEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCcceeeHHHHHHHHHhcCCCCcCCCCCH-HHHHHcCCCcCCCCEEeHHHHHHHHHHH
Confidence 344556666778899999999999999988522211 1222 22455554 567899998888777654
No 479
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=56.28 E-value=22 Score=30.00 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=26.1
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHhhccc
Q psy4132 272 PLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSV 303 (473)
Q Consensus 272 ~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~ 303 (473)
+.+..++..+|.|.+|.|+..|=..++..-..
T Consensus 15 eAi~~~H~~lDdD~dG~Id~~Es~~Flre~~~ 46 (150)
T 2l5y_A 15 EALQTIHKQMDDDKDGGIEVEESDEFIREDMK 46 (150)
T ss_dssp HHHHHHHHHHSSSCSSCBCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCCCcHHHHHHHHHHHhc
Confidence 34677888999999999999999888877644
No 480
>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}
Probab=56.08 E-value=6 Score=29.82 Aligned_cols=20 Identities=5% Similarity=-0.137 Sum_probs=12.2
Q ss_pred HHHhcCCCCCcccHHHHHHH
Q psy4132 278 IDIFDEDRNGEVDFKEFIQG 297 (473)
Q Consensus 278 ~~~~D~d~dG~I~~~EF~~~ 297 (473)
....|.|+||.|+-.++..+
T Consensus 41 ~~~ADvngDG~In~~D~~~l 60 (82)
T 4dh2_B 41 MWVGDVNGDNVINDIDCNYL 60 (82)
T ss_dssp HHHHCSSSSSCCSHHHHHHH
T ss_pred hhheeccCCCcCCHHHHHHH
Confidence 34566667777666666543
No 481
>2zkz_A Transcriptional repressor PAGR; protein-DNA, HTH motif, dimer, DN binding, transcription regulation; 2.00A {Bacillus anthracis}
Probab=55.85 E-value=6.5 Score=30.42 Aligned_cols=44 Identities=14% Similarity=0.135 Sum_probs=34.9
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
+++..+-..++.|..|+|+.+++|.+-....|...++. .+.+..
T Consensus 31 ~IL~~l~~~~~~~~~ela~~l~is~stvs~hL~~L~~~-lv~~~~ 74 (99)
T 2zkz_A 31 KIVNELYKHKALNVTQIIQILKLPQSTVSQHLCKMRGK-VLKRNR 74 (99)
T ss_dssp HHHHHHHHHSCEEHHHHHHHHTCCHHHHHHHHHHHBTT-TBEEEE
T ss_pred HHHHHHHHCCCcCHHHHHHHHCcCHHHHHHHHHHHHHH-hhhheE
Confidence 34433333478999999999999999999999999999 776443
No 482
>4b8x_A SCO5413, possible MARR-transcriptional regulator; winged helix motif; HET: CME; 1.25A {Streptomyces coelicolor}
Probab=55.85 E-value=8.1 Score=32.15 Aligned_cols=41 Identities=5% Similarity=-0.014 Sum_probs=35.9
Q ss_pred hCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcc
Q psy4132 419 QNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIE 459 (473)
Q Consensus 419 ~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~ 459 (473)
..+++|..++|+.++++..-+...+...|.+|+|.|..+..
T Consensus 48 ~~~~~t~~eLa~~l~~~~~tvs~~v~~Le~~Glv~r~~~~~ 88 (147)
T 4b8x_A 48 KSGELPMSKIGERLMVHPTSVTNTVDRLVRSGLVAKRPNPN 88 (147)
T ss_dssp GGGEEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECC-
T ss_pred CCCCcCHHHHHHHHCCCHHHHHHHHHHHHhCCCEEEeecCC
Confidence 34679999999999999999999999999999999865543
No 483
>2p4w_A Transcriptional regulatory protein ARSR family; archaea, PHR, heat shock, transcriptional regulation, winged DNA binding; 2.60A {Pyrococcus furiosus} SCOP: a.4.5.64
Probab=54.64 E-value=9.8 Score=33.89 Aligned_cols=46 Identities=15% Similarity=0.106 Sum_probs=38.8
Q ss_pred HHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 411 EKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 411 ~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
-.++.++. .+++|..++++.+++|.+.....|...++.|+|.+...
T Consensus 18 l~IL~~L~-~~~~s~~eLa~~l~is~stvs~hLk~Le~~GLV~~~~~ 63 (202)
T 2p4w_A 18 RRILFLLT-KRPYFVSELSRELGVGQKAVLEHLRILEEAGLIESRVE 63 (202)
T ss_dssp HHHHHHHH-HSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHH-hCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCceEEEee
Confidence 34555564 47899999999999999999999999999999997543
No 484
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=54.63 E-value=24 Score=29.81 Aligned_cols=54 Identities=7% Similarity=0.096 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHHHhccCCCCCeeHHhhhccceeeeec---ccCcHHHHHHHHHHHhh
Q psy4132 366 LLSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVLQLK---SCEDASFVEKTYEIVSQ 419 (473)
Q Consensus 366 ~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl~~~---~~~~~~~~~~~~~~~~~ 419 (473)
.++..++.-+|..+-..+...|+|++|..+|..+-.. -.+.++.+..|.+++..
T Consensus 56 ~~T~tdvDiiF~KvK~k~~rkI~f~qF~~aL~~lA~kr~kg~~~~e~~~~i~kl~~~ 112 (151)
T 1wlm_A 56 AVTGTDVDIVFSKVKAKSARVINYEEFKKALEELATKRFKGKSKEEAFDAICQLIAG 112 (151)
T ss_dssp SSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHTHHHHSSSCCHHHHHHHHHHHHTT
T ss_pred CCChhhcceehheeccCccceecHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhC
Confidence 4888899999998866667889999999887644322 22334455555555533
No 485
>4a0z_A Transcription factor FAPR; lipid homeostasis; HET: MLC; 1.90A {Staphylococcus aureus} PDB: 4a0y_A 4a0x_A* 4a12_A
Probab=54.51 E-value=12 Score=33.04 Aligned_cols=48 Identities=19% Similarity=0.113 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccc
Q psy4132 407 ASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCR 454 (473)
Q Consensus 407 ~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~ 454 (473)
+.-...|+++++.++.+|.+|+|+.+++|..-++.-|......|++-|
T Consensus 11 ~eR~~~i~~~l~~~~~~~~~~la~~~~vs~~TiRrDl~eL~~~~l~~r 58 (190)
T 4a0z_A 11 DKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKR 58 (190)
T ss_dssp HHHHHHHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHHHHHTCCCHHHH
T ss_pred HHHHHHHHHHHHHCCCEeHHHHHHHHCCCHHHHHHHHHHhcCcchhhH
Confidence 355678899999999999999999999999999988887776665554
No 486
>2p8t_A Hypothetical protein PH0730; pyrococcus horikoshii OT3, STR genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.72 d.74.4.2
Probab=54.18 E-value=19 Score=31.91 Aligned_cols=52 Identities=8% Similarity=-0.048 Sum_probs=44.2
Q ss_pred cccCcHHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 402 KSCEDASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
.+.+.+++++.++.+ .+.++..++|+.+++|..-..+.+....++|+|-++.
T Consensus 13 ls~s~EdYLk~I~~L---~~~V~~~~LA~~LgvS~~SV~~~lkkL~e~GLV~~~~ 64 (200)
T 2p8t_A 13 PEYTVEDVLAVIFLL---KEPLGRKQISERLELGEGSVRTLLRKLSHLDIIRSKQ 64 (200)
T ss_dssp -CCCHHHHHHHHHHT---TSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEC-
T ss_pred CCCCHHHHHHHHHHH---cCCccHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEeC
Confidence 344567888888877 3679999999999999999999999999999998876
No 487
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=54.07 E-value=25 Score=29.63 Aligned_cols=61 Identities=10% Similarity=0.227 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHhhCCCCCCCccHHHHhcch-hc-cC-CHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q psy4132 237 VDIRRLGKRFRKLDLDNSGALSIDEFMSLP-EL-QQ-NPLVQRVIDIFDEDRNGEVDFKEFIQGVSQ 300 (473)
Q Consensus 237 ~~~~~l~~~F~~~D~d~~G~Is~~el~~l~-~~-~~-~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 300 (473)
...+.++.+|+.+|.|.+|.|+..|-..+. .. .. ++. ++- ..++ .+|..|+-+|+...+..
T Consensus 12 ~~~eAi~~~H~~lDdD~dG~Id~~Es~~Flre~~~~~d~~-~k~-~~~h-~~D~~Isv~eLw~~W~~ 75 (150)
T 2l5y_A 12 FSLEALQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDAT-NKH-SHLH-REDKHITIEDLWKRWKT 75 (150)
T ss_dssp HHHHHHHHHHHHHSSSCSSCBCHHHHHHHHHHHTTTTCSH-HHH-HHHT-TTCCCBCHHHHHHHHHT
T ss_pred hhHHHHHHHHHHcCCCCCCCCcHHHHHHHHHHHhcccCch-hHH-hhhc-CCCCeeeHHHHHHHHcc
Confidence 345678889999999999999999887742 11 11 111 111 2333 34678888888776654
No 488
>2pjp_A Selenocysteine-specific elongation factor; SELB, protein-RNA complex, elongation factor, winged- helix, bulge, translation/RNA complex; 2.30A {Escherichia coli}
Probab=53.70 E-value=15 Score=29.63 Aligned_cols=50 Identities=14% Similarity=0.064 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 407 ASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 407 ~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
+.....+.+++..++.+|..++...+|+|-.+|.-.|+.....|...|.+
T Consensus 65 ~~~~~~l~~~~~~~~~it~ae~Rd~lg~sRK~ai~lLE~~Dr~g~TrR~g 114 (121)
T 2pjp_A 65 VEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRG 114 (121)
T ss_dssp HHHHHHHHHHHHHHSSEEHHHHHHHHTSCHHHHHHHHHHHHHHTSEEEET
T ss_pred HHHHHHHHHHHHHCCCccHHHHHHHHCCcHHHHHHHHHHHhhcCCeEeeC
Confidence 45566677777888999999999999999999999999999999988865
No 489
>3mq0_A Transcriptional repressor of the blcabc operon; helix-turn-helix, GAF fold, transcription repressor; 1.79A {Agrobacterium tumefaciens}
Probab=53.45 E-value=9.2 Score=35.76 Aligned_cols=45 Identities=16% Similarity=0.173 Sum_probs=36.5
Q ss_pred HHHHHhh-CCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 413 TYEIVSQ-NVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 413 ~~~~~~~-~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
|++++.. .+++|..|||+.+++|-.-+...|...++.|+|.+|..
T Consensus 35 IL~~l~~~~~~ltl~eia~~lgl~ksTv~RlL~tL~~~G~v~~~~~ 80 (275)
T 3mq0_A 35 ILDLVAGSPRDLTAAELTRFLDLPKSSAHGLLAVMTELDLLARSAD 80 (275)
T ss_dssp HHHHHHHCSSCEEHHHHHHHHTCC--CHHHHHHHHHHTTSEEECTT
T ss_pred HHHHHhhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECCC
Confidence 3444444 45799999999999999999999999999999999963
No 490
>3r4k_A Transcriptional regulator, ICLR family; DNA/RNA-binding 3-helical bundle, profilin-like, structural joint center for structural genomics, JCSG; 2.46A {Ruegeria SP}
Probab=53.23 E-value=6.7 Score=36.36 Aligned_cols=38 Identities=8% Similarity=0.120 Sum_probs=35.7
Q ss_pred CCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 420 NVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 420 ~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
.+++|..|+|+.+++|-.-+...|...++.|+|.+|..
T Consensus 19 ~~~lsl~eia~~lgl~ksT~~RlL~tL~~~G~v~~~~~ 56 (260)
T 3r4k_A 19 RLEIGLSDLTRLSGMNKATVYRLMSELQEAGFVEQVEG 56 (260)
T ss_dssp BSEEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEECSS
T ss_pred CCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEcCC
Confidence 46799999999999999999999999999999999864
No 491
>1fx7_A Iron-dependent repressor IDER; DTXR, iron-dependent regulator, signaling protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.4.5.24 a.76.1.1 b.34.1.2 PDB: 1u8r_A
Probab=52.85 E-value=21 Score=32.19 Aligned_cols=50 Identities=14% Similarity=0.121 Sum_probs=41.4
Q ss_pred cHHHHHHHHHHHhhCCCCCH--HHHHHhhCCcHHHHHHHHHHHHHcCCccccCC
Q psy4132 406 DASFVEKTYEIVSQNVFVTV--EQFSRLASVSLVIAKHRLLLAETHGKLCRDQS 457 (473)
Q Consensus 406 ~~~~~~~~~~~~~~~~~ls~--~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~ 457 (473)
.+.++..++.+... ++|. .++|+.++++..-....|...+.+|+|.|...
T Consensus 8 ~e~~L~~L~~l~~~--~~~~~~~~La~~l~vs~~tvs~~l~~Le~~GlV~r~~~ 59 (230)
T 1fx7_A 8 TEMYLRTIYDLEEE--GVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGD 59 (230)
T ss_dssp HHHHHHHHHHHHHH--TSCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECTT
T ss_pred HHHHHHHHHHHhhc--CCCCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCC
Confidence 45677777766553 4665 99999999999999999999999999998653
No 492
>2qq9_A Diphtheria toxin repressor; regulator, DTXR, helix-turn-helix, metal ION, ACT DNA-binding, ferrous iron, transcription; 1.71A {Corynebacterium diphtheriae} PDB: 2tdx_A 1ddn_A 1g3t_A 1g3s_A 1g3w_A 2qqa_A 2qqb_A 2dtr_A 1bi0_A 1bi2_A 1bi3_A 1dpr_A 1bi1_A 1fwz_A 1g3y_A 1c0w_A* 3glx_A 1p92_A 1xcv_A 1f5t_A ...
Probab=52.72 E-value=24 Score=31.71 Aligned_cols=51 Identities=12% Similarity=0.118 Sum_probs=41.5
Q ss_pred cHHHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccC
Q psy4132 406 DASFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQ 456 (473)
Q Consensus 406 ~~~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~ 456 (473)
.+.++..++.+.......+..++|+.++++..-....|...+++|+|.|..
T Consensus 8 ~e~yL~~i~~l~~~~~~~~~~~la~~l~vs~~tvs~~l~~Le~~GlV~r~~ 58 (226)
T 2qq9_A 8 TEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVAS 58 (226)
T ss_dssp HHHHHHHHHHHHHHTCCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECT
T ss_pred HHHHHHHHHHHhhcCCCccHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEeC
Confidence 356777777766553334459999999999999999999999999999865
No 493
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=51.63 E-value=22 Score=29.14 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=42.4
Q ss_pred HHHHHHHhh-C-CCCCHHHHHHhh-----CCcHHHHHHHHHHHHHcCCccccCCccccccc
Q psy4132 411 EKTYEIVSQ-N-VFVTVEQFSRLA-----SVSLVIAKHRLLLAETHGKLCRDQSIEGLRFY 464 (473)
Q Consensus 411 ~~~~~~~~~-~-~~ls~~e~a~~~-----~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~ 464 (473)
..+++++.. . +.+|++|+.+.+ ++|..-.=..|...++.|.|.+-....|...|
T Consensus 21 ~~Il~~L~~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~~~~~Y 81 (136)
T 1mzb_A 21 VKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVF 81 (136)
T ss_dssp HHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEEEECSSSSSCEE
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHHHHHCCcEEEEEeCCCceEE
Confidence 345555544 3 589999999888 88999999999999999999988776775444
No 494
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=51.25 E-value=5.5 Score=32.82 Aligned_cols=52 Identities=19% Similarity=0.285 Sum_probs=37.5
Q ss_pred HHHHHhhCCCCCCCccHHHHhcchhccCCHHHHHHHHHhcCCCCCcccHHHHHHHHhhccc
Q psy4132 243 GKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDRNGEVDFKEFIQGVSQFSV 303 (473)
Q Consensus 243 ~~~F~~~D~d~~G~Is~~el~~l~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~ 303 (473)
.+-|.....+....|+.++|.. ..+.+..+|+++.|.|.+.++..++..+..
T Consensus 23 lenF~~~~~~~~~~l~~~dl~~---------F~~~W~~fDP~aTg~I~~~~L~~ll~~L~p 74 (129)
T 2kav_A 23 SENFSVATEESAEPLSEDDFEM---------FYEVWEKFDPDATQFIEFAKLSDFADALDP 74 (129)
T ss_dssp -CCSCCTTSSCSCSSCHHHHHH---------HHHHHHHHCTTCCCEECGGGHHHHHHHSCT
T ss_pred eccHHHHHHhhccCCCHHHHHH---------HHHHHHhcCCCCceEEeHHHHHHHHHhCCc
Confidence 3345555566666777777653 337888999999999999999888887643
No 495
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=50.97 E-value=27 Score=30.43 Aligned_cols=55 Identities=9% Similarity=0.088 Sum_probs=38.4
Q ss_pred CCCHHHHHHHHHHhccCCCCCeeHHhhhccceeeeecc---cCcHHHHHHHHHHHhhC
Q psy4132 366 LLSPEDLLNSCLALDKLPDSPIYLKTYSSGVKVLQLKS---CEDASFVEKTYEIVSQN 420 (473)
Q Consensus 366 ~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~~~vl~~~~---~~~~~~~~~~~~~~~~~ 420 (473)
.++..++.-+|..+-..+...|+|++|..+|..+...- .+.++++..|.+++...
T Consensus 49 ~~T~tdvDIiF~KvK~k~~rkI~feqF~~aL~~lA~kk~~g~s~eE~~~~i~kL~~~~ 106 (184)
T 2jrf_A 49 SVTGTDVDIVFSKVKGKSARVINYEEFKKALEELATKRFKGKSKEEAFDAICQLVAGK 106 (184)
T ss_dssp SSCHHHHHHHHHHHCCSCCSEEEHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHTTTTC
T ss_pred CCChhhcchhhheeccCcceeecHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCC
Confidence 48888999999998766678899999998887544332 33345566555555443
No 496
>1xb4_A VPS25, hypothetical 23.6 kDa protein in YUH1-URA8 intergenic region; winged helix, unknown function; 3.10A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_B 1u5t_C
Probab=50.49 E-value=40 Score=29.92 Aligned_cols=97 Identities=8% Similarity=-0.083 Sum_probs=65.1
Q ss_pred CCCHHHHHHHHHHhccCCCCCeeHHhhhcc------ceeeeecccCcHHHHHHHHHHHhhCC----CCCHHHHHHh----
Q psy4132 366 LLSPEDLLNSCLALDKLPDSPIYLKTYSSG------VKVLQLKSCEDASFVEKTYEIVSQNV----FVTVEQFSRL---- 431 (473)
Q Consensus 366 ~ls~~ei~~~~~~~D~~~dg~Is~~EF~~~------~~vl~~~~~~~~~~~~~~~~~~~~~~----~ls~~e~a~~---- 431 (473)
.++++.+..++..+-..| ...+..=.++ -........+.++....|++++..+| -+|.-||.+-
T Consensus 84 rLs~e~~~~Il~~Lv~~g--~aew~d~~~~~~~~~~k~~~~I~Wrtp~EWa~~I~~Wv~~tG~~~sV~TlyEL~~Gd~t~ 161 (202)
T 1xb4_A 84 SVSQVFIDEIWSQMTKEG--KCLPIDQSGRRSSNTTTTRYFILWKSLDSWASLILQWFEDSGKLNQVITLYELSEGDETV 161 (202)
T ss_dssp ECCHHHHHHHHHHHHHTT--SEEEESSSSBCC--CCCCEEEECSSCHHHHHHHHHHHHHTTSCTTSCEEHHHHC--CCSC
T ss_pred cCCHHHHHHHHHHHHhcC--CeEEeCCCCcccccccCceEEEEeCCHHHHHHHHHHHHHhcCCcCcEEEeehcccCCCCC
Confidence 488888888887664432 1111110000 01122345567889999999998865 5788888775
Q ss_pred ----hCCcHHHHHHHHHHHHHcCCcc--ccCCccccccc
Q psy4132 432 ----ASVSLVIAKHRLLLAETHGKLC--RDQSIEGLRFY 464 (473)
Q Consensus 432 ----~~~s~~~~~~~l~~~~~~g~l~--~d~~~~g~~~~ 464 (473)
-|++..+.++.|...+.+|+.. -++..+|+.|+
T Consensus 162 ~~ef~gmd~~vL~kaL~~L~k~GKaqi~~~~~~~GVKF~ 200 (202)
T 1xb4_A 162 NWEFHRMPESLLYYCLKPLCDRNRATMLKDENDKVIAIK 200 (202)
T ss_dssp CSTTTTCCHHHHHHHHHHHHGGGCCEEEECTTSCEEEEE
T ss_pred CccccCCCHHHHHHHHHHHHHcCCEEEeecCCCCeEEEE
Confidence 4899999999999999999865 35555899986
No 497
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=50.48 E-value=28 Score=32.96 Aligned_cols=45 Identities=13% Similarity=0.086 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCcc
Q psy4132 408 SFVEKTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLC 453 (473)
Q Consensus 408 ~~~~~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~ 453 (473)
..+.++..+ ...+++|..|+|+.+++|-...+..|..++++|.|-
T Consensus 8 ~~~~~ia~l-~~~~~~~~~ela~~l~vS~~tIrRdL~~l~~~G~v~ 52 (315)
T 2w48_A 8 RLIVKIAQL-YYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVT 52 (315)
T ss_dssp HHHHHHHHH-HHTSCCCHHHHHHHTTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHH-HHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCcEE
Confidence 334444444 455779999999999999999999999999999996
No 498
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=50.24 E-value=17 Score=29.60 Aligned_cols=54 Identities=9% Similarity=0.121 Sum_probs=43.5
Q ss_pred HHHHHHHhh-CCCCCHHHHHHhh-----CCcHHHHHHHHHHHHHcCCccccCCccc-cccc
Q psy4132 411 EKTYEIVSQ-NVFVTVEQFSRLA-----SVSLVIAKHRLLLAETHGKLCRDQSIEG-LRFY 464 (473)
Q Consensus 411 ~~~~~~~~~-~~~ls~~e~a~~~-----~~s~~~~~~~l~~~~~~g~l~~d~~~~g-~~~~ 464 (473)
..+++++.. .+.+|++|+.+.+ ++|..-.-..|...++.|.|.+-....| .+|.
T Consensus 14 ~~Il~~l~~~~~~~sa~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv~~~~~~~~~~~y~ 74 (131)
T 2o03_A 14 AAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLVDTLHTDTGESVYR 74 (131)
T ss_dssp HHHHHHHHHCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTTSEEEEECTTSCEEEE
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCEEEEEeCCCceEEE
Confidence 344555543 4689999999998 8999999999999999999998887777 4443
No 499
>3f8m_A GNTR-family protein transcriptional regulator; PHNF, HUTC, winged helix-TUR UTRA, DNA-binding, transcription regulation; 1.80A {Mycobacterium smegmatis}
Probab=49.15 E-value=20 Score=32.78 Aligned_cols=48 Identities=8% Similarity=-0.059 Sum_probs=38.4
Q ss_pred HHHHHHHhhCCCC-CHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCcccc
Q psy4132 411 EKTYEIVSQNVFV-TVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGL 461 (473)
Q Consensus 411 ~~~~~~~~~~~~l-s~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~ 461 (473)
..|.. +.....+ |..++|+.+++|-...++-|...+.+|+|.| ...|+
T Consensus 25 ~~I~~-~~~g~~lPse~~La~~~~vSr~tvr~Al~~L~~~G~i~~--~g~Gt 73 (248)
T 3f8m_A 25 RMLDG-MRIGDPFPAEREIAEQFEVARETVRQALRELLIDGRVER--RGRTT 73 (248)
T ss_dssp HHHHH-CCTTCBCCCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEE--ETTEE
T ss_pred HHHhC-CCCCCcCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEe--CCCEE
Confidence 33343 4444567 8999999999999999999999999999999 44453
No 500
>2qc0_A Uncharacterized protein; NP_719793.1, uncharacterized protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Shewanella oneidensis} PDB: 3eqx_A*
Probab=49.15 E-value=15 Score=35.96 Aligned_cols=54 Identities=11% Similarity=0.091 Sum_probs=42.5
Q ss_pred HHHHHHhhCCCCCHHHHHHhhCCcHHHHHHHHHHHHHcCCccccCCccccccccc
Q psy4132 412 KTYEIVSQNVFVTVEQFSRLASVSLVIAKHRLLLAETHGKLCRDQSIEGLRFYEN 466 (473)
Q Consensus 412 ~~~~~~~~~~~ls~~e~a~~~~~s~~~~~~~l~~~~~~g~l~~d~~~~g~~~~~n 466 (473)
++...+-..+.++..++++..++|..-|+..|...++.|.|.+..+.-+ ++|.+
T Consensus 301 ~ll~~l~~~p~~t~~~~~~~~gvS~~Ta~r~L~~L~e~GiL~~~~~gR~-~~y~~ 354 (373)
T 2qc0_A 301 ELVQVIFEQPYCRIQNLVESGLAKRQTASVYLKQLCDIGVLEEVQSGKE-KLFVH 354 (373)
T ss_dssp HHHHHHHHCSEEEHHHHHHTSSSCHHHHHHHHHHHHHTTSCEEC--CCS-CEEEC
T ss_pred HHHHHHHhCCcccHHHHHHHhCCCHHHHHHHHHHHHHCCcEEEecCCCc-eEEeh
Confidence 3444444567789999999999999999999999999999998865444 67755
Done!