BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4150
(395 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328698487|ref|XP_001948012.2| PREDICTED: hypothetical protein LOC100166297 [Acyrthosiphon pisum]
Length = 2033
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 124/263 (47%), Positives = 177/263 (67%), Gaps = 14/263 (5%)
Query: 28 DFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDIN 87
DF + SLA ALE L YG++ FY +E+ KE C L D D QNLL + +L+
Sbjct: 444 DFTICMSLAYALELLTIYGVKVFYLQSLEM-KETHKC--LSNDADFQNLLHGINKELN-- 498
Query: 88 IMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMV 147
S + WSH K L++I++++F + ++K+IIF YR+VV E+F++LK V
Sbjct: 499 --SQDLTWSHPKLFELKKIVQNYFGFKNVEA-SSKIIIFCQYRLVVVEVFELLKTFGSSV 555
Query: 148 KASMFVGQS----SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQ 203
K MFVGQS G+ Q+EQ E+M +F++G+FN LIATSV EEGLDIG++DL+IC +A
Sbjct: 556 KPVMFVGQSLKEKGGLRQKEQLEVMSRFKSGDFNVLIATSVAEEGLDIGDVDLIICLEAN 615
Query: 204 KSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAK 263
KSPIK VQRLGRTGRKR+G+C+ LLT+G+E + +S+ + K+ V K++ NK+I + LA
Sbjct: 616 KSPIKFVQRLGRTGRKRSGKCITLLTEGKEQIKYNSSVSSSKTLVIKMLKNKAILSKLAP 675
Query: 264 NGPRMIPAHVTPRIKCLHIVVKD 286
GPR++P H+ P +CL I VK+
Sbjct: 676 EGPRLVPKHIHP--QCLMIHVKE 696
>gi|405953921|gb|EKC21486.1| Fanconi anemia group M protein [Crassostrea gigas]
Length = 2327
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 166/290 (57%), Gaps = 25/290 (8%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGS----------CPILGKDNDL 73
M++ DF + SL E + +GLRS YN L K D P G DL
Sbjct: 382 MVEGDFALAISLYHGYELVQLHGLRSLYNFLDGAMKGDKGHGRTKTELMKIPDFG---DL 438
Query: 74 QNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKG-----ETTKVIIFAN 128
N+L + K++ + H K +L E++ HF+ G +TT+++IF+
Sbjct: 439 MNMLHEKFGKMNGQENAQAINLGHPKLAKLEEVVLDHFKSVEGSGTEQNEQTTRIMIFSQ 498
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIAT 182
YR V EI ++L+ EP VKA F+GQSS G TQ+EQ ++MKKFR G +NTL+AT
Sbjct: 499 YRDSVEEITNMLRRHEPKVKAMSFIGQSSAGKATKGFTQKEQLKVMKKFREGRYNTLVAT 558
Query: 183 SVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQ 242
VGEEGLDIGE+DL+IC+DA KSPI++VQR+GRTGRKR GR V+L+TQG+E + +
Sbjct: 559 CVGEEGLDIGEVDLIICYDASKSPIRLVQRMGRTGRKRQGRIVMLVTQGKEEQIYNQGIY 618
Query: 243 TCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAK 292
+ KS + K I N + ++ PRMIP V P+ + I VK P K
Sbjct: 619 SKKS-IHKAILNSAKTLQFYQSNPRMIPEGVEPKSHKMFITVKQAYKPNK 667
>gi|321472411|gb|EFX83381.1| hypothetical protein DAPPUDRAFT_48010 [Daphnia pulex]
Length = 657
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 172/291 (59%), Gaps = 24/291 (8%)
Query: 4 KDKYVKSKAQ-FPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLV-EVSKED 61
+DK+ ++ FP R +++ DF + +L ALE L+ +G+R FYN L + D
Sbjct: 356 RDKFRQNPPDNFP---RSRSGIMEGDFALCITLTHALELLLQHGIRGFYNFLAGKTDAAD 412
Query: 62 GSC------PILGKDNDLQNLLQQLKPKL--DINIMSSEYAWSHLKFIRLREILESHFRL 113
G LGK ++ LK K D I S A SH K RL+EI+ HF+
Sbjct: 413 GETGHNRTRTELGKVTGFIEMMSDLKSKFGNDCQIGS---AVSHPKLTRLKEIVLEHFQK 469
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS--------GVTQQEQK 165
++G T+V+IF+ YR V EI +L+ P++KA FVG + G TQ +Q
Sbjct: 470 AEKEGRPTRVMIFSQYRDSVNEIVALLEEYAPLIKAMSFVGHGNSSGGVKTKGFTQADQI 529
Query: 166 EIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV 225
I+K+F G++NTL+AT VGEEGLDIG++D++IC+D KSP+++VQR GRTGR+R+GR V
Sbjct: 530 RIIKQFSEGDYNTLVATCVGEEGLDIGDVDMIICYDVHKSPVRLVQRCGRTGRQRDGRIV 589
Query: 226 ILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPR 276
+L+T+G+E H + M K+ ++ I+ N + L K PR+IP H++PR
Sbjct: 590 MLMTEGKEEHTYNQCMSQKKNLLKNIVGNPKLKEFLLKQEPRLIPRHLSPR 640
>gi|432938949|ref|XP_004082559.1| PREDICTED: Fanconi anemia group M protein homolog [Oryzias latipes]
Length = 1928
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 177/301 (58%), Gaps = 23/301 (7%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ PHI M++ DF + SL E L+ GLRS + + +
Sbjct: 345 ILARDQFRKNPP--PHIKSPQQGMLEGDFALCISLYHGYELLMQMGLRSLFFYVQGIM-- 400
Query: 61 DGSCPILGKDNDLQNLLQQLKPKLDINIM--------SSEYAWSHLKFIRLREILESHFR 112
DGS + N+LQ + ++ M + + +SH K +L E++ HFR
Sbjct: 401 DGSREMSRTKNELQRTPTFMDLYHEMEAMFVKPSAGPDAPFVYSHPKLKKLEEVVLQHFR 460
Query: 113 LHAEKGE----TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQ 162
+ AE +T+V+IF+++R V EI +L P+++ F+GQ+S G TQ+
Sbjct: 461 VWAESNSDNHVSTRVMIFSSFRESVQEIAAMLNRHSPLIRVMTFMGQASAGKGVKGFTQK 520
Query: 163 EQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNG 222
EQ E++++FR G FNTL++T VGEEGLDIGE+DL++CFDAQK+PI++VQR+GRTGRKR G
Sbjct: 521 EQLEVVQRFRQGGFNTLVSTCVGEEGLDIGEVDLIVCFDAQKNPIRLVQRMGRTGRKRQG 580
Query: 223 RCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHI 282
R V++L +GRE + S +S + I NK+ + ++ N PRM+P + P + ++I
Sbjct: 581 RIVVVLAEGREERTYNQSQSNKRSVYKSITGNKNGF-HMYHNSPRMLPEGLNPSLHKMYI 639
Query: 283 V 283
Sbjct: 640 T 640
>gi|410898563|ref|XP_003962767.1| PREDICTED: Fanconi anemia group M protein homolog [Takifugu
rubripes]
Length = 1899
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 177/298 (59%), Gaps = 20/298 (6%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ PHI +++ DF + SL E L+ GLRS + +
Sbjct: 354 ILARDQFRKNP--LPHIKGPQQGVLEGDFALCISLYHGYELLMQMGLRSLFLYFQGIM-- 409
Query: 61 DGSCPILGKDNDLQ------NLLQQLKPKLDINIMSSE--YAWSHLKFIRLREILESHFR 112
DGS + N+LQ +L Q+++ S+ + +SH K +L +++ HFR
Sbjct: 410 DGSREMSRARNELQRTPVFMDLYQEMEAMFVKQSAESDEPFIYSHPKLQKLEDVVLQHFR 469
Query: 113 LHAEKGE-TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQK 165
L A E +T+V+IF+++R V EI +L P+++ F+GQ+S G TQ+EQ
Sbjct: 470 LRAGSSEVSTRVMIFSSFRESVQEIAAMLNRHAPLIRVMTFMGQASAGKGVKGFTQKEQL 529
Query: 166 EIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV 225
E++ +FR G FNTL++T VGEEGLDIGE+DL++CFDAQK+P ++VQR+GRTGRKR GR V
Sbjct: 530 EVVHRFRQGGFNTLVSTCVGEEGLDIGEVDLIVCFDAQKNPTRLVQRMGRTGRKRQGRIV 589
Query: 226 ILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIV 283
++L++GRE + S ++ + I NK + ++ + PRM+P + P + +HI
Sbjct: 590 VILSEGREERTYNQSQSNKRNVYKSITGNKCRF-HMYPSSPRMLPQGLIPTLHKMHIT 646
>gi|307207083|gb|EFN84892.1| Fanconi anemia group M protein [Harpegnathos saltator]
Length = 1344
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 200/364 (54%), Gaps = 31/364 (8%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLK--- 81
I + ++ ++ A + ++ +GLR+F + + + +N L+ LL ++
Sbjct: 297 IMKTLNILLTMYHAYDLMIRHGLRAF----CKFYQNHSDKFWMNNENQLRQLLYDIETYL 352
Query: 82 -------PKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVA 134
P ++ M + + H KF +L+E+LE HFR + + T+ I+F YR +V
Sbjct: 353 GPFPDILPNGHVSEMPTNIMFGHNKFYKLKELLERHFRKNNGENADTRAIVFVEYRDIVN 412
Query: 135 EIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEI 194
E++ +L +P+++ MFVGQ+S Q++Q + ++ FR N LI+TS+GEEGLD+GE+
Sbjct: 413 EVYILLLQSKPLIRPQMFVGQASQ-KQKQQIKALEDFRNNHVNVLISTSIGEEGLDVGEV 471
Query: 195 DLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIIN 253
DL+ICFD +Q SP ++VQR+GRTGRKR+G +IL+T G+E N ++++ S KI+N
Sbjct: 472 DLIICFDVSQHSPTRLVQRMGRTGRKRDGHIIILVTDGKEYENLKSTLSKRNSINNKILN 531
Query: 254 NKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSK-KKL 312
+I+++L ++ PRMIP TP +HI + TP SK+K K K N+ S K+
Sbjct: 532 TSNIFSSLYQSNPRMIPNQFTPECHMMHITPVQK-TPNVSSKRKKKRVNKENEASSIKQK 590
Query: 313 ETDGNSEPAGKQNK--TNAKKTKKQ-------PMMTQSNDIRTCFE----NITKKKKTFI 359
ET N+ K TN K +KQ + TQS ++ + + I
Sbjct: 591 ETTSNNAGESLMMKFLTNNKYEQKQNGACNIYTLTTQSGNVHNTIDPNHVKLLSDDNAGI 650
Query: 360 DFLT 363
DF+T
Sbjct: 651 DFMT 654
>gi|345306292|ref|XP_003428451.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M
protein-like, partial [Ornithorhynchus anatinus]
Length = 2081
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 199/344 (57%), Gaps = 39/344 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P++ +++ + SL E L GLRSFY L +
Sbjct: 270 VLARDQFRKNPS--PNVVGIQQGVVEGQLALCISLYHGFELLQQMGLRSFYMFLRGIM-- 325
Query: 61 DGSCPI------LGKDND---LQNLLQQLKPKL------DINIMSSEYA-------WSHL 98
DG+ + LG++ D L LL+ + P ++ I ++ +SH
Sbjct: 326 DGTKGLARSRNELGRNGDFMKLYKLLEGMFPDSRTPTGSNVGIGATRIGHEDQKIFYSHP 385
Query: 99 KFIRLREILESHFRLH-----AEKG-ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMF 152
K +L E++ HFR +E G ++T+V+IF+++R V EI D+L P+++A F
Sbjct: 386 KLKKLEEVVVEHFRTWKDHRVSENGCDSTRVMIFSSFRDSVQEIADMLHQHHPVIRAMSF 445
Query: 153 VGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VG +SG TQ+EQ E++++FR G +NTL++T VGEEGLDIGE+DL++CFDAQKSPI
Sbjct: 446 VGHASGKNVKGFTQKEQLEVVRQFRDGGYNTLVSTCVGEEGLDIGEVDLIVCFDAQKSPI 505
Query: 208 KMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPR 267
++VQR+GRTGRKR GR V++L++GRE + S KS + I N + + ++ PR
Sbjct: 506 RLVQRMGRTGRKRQGRIVVILSEGREERMYNQSQSNRKSIYKAIAGNSKAF-HFYQDSPR 564
Query: 268 MIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKK 311
M+P + P++ + + + PAKPSK P+++ ++ K++
Sbjct: 565 MVPEGINPKLHKM-FITPETPEPAKPSKTLPRKSSLSSSGGKQR 607
>gi|395504025|ref|XP_003756361.1| PREDICTED: Fanconi anemia group M protein, partial [Sarcophilus
harrisii]
Length = 1871
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 177/314 (56%), Gaps = 37/314 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D + K+ + PH +I+ DF + SL E L G+RS Y L +
Sbjct: 349 ILARDLFRKNSS--PHTLGGQQGIIEGDFAICISLYHGYELLQQMGMRSLYIFLCGIM-- 404
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSSE---------------YAWSHLK 99
DG+ + L ++ L +QL +SE + +SH K
Sbjct: 405 DGTKGMTRTKNELSRNEQFMELFEQLGNMFSDRNTTSEIVDGNPIQRGHNDKKFIYSHPK 464
Query: 100 FIRLREILESHFRLHAEKGET-----TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HFR ++ T T+V+IF+++R V EI ++L +P V+ FVG
Sbjct: 465 LKKLEEVVVEHFRTWKDQNSTEKKCDTRVMIFSSFRDSVQEIAEMLHH-QPTVRVMTFVG 523
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG +TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSP+++
Sbjct: 524 HASGKSTKGLTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPVRL 583
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++LT+GRE + S Q+CK + K I+ S N + PRMI
Sbjct: 584 VQRMGRTGRKRQGRIVVILTEGREECAYNRS-QSCKRSIYKAISGNSRAFNFYQGSPRMI 642
Query: 270 PAHVTPRIKCLHIV 283
P + P++ + I
Sbjct: 643 PDGIYPKLHKMFIA 656
>gi|307176233|gb|EFN65868.1| Fanconi anemia group M protein [Camponotus floridanus]
Length = 1323
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 169/271 (62%), Gaps = 17/271 (6%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLK--- 81
I + ++ ++ A E +V +GLR+F + + + +N LQ+LL ++
Sbjct: 297 IMKTLNILLTMYHAYELMVRHGLRAF----CKFYQNHSDKFWMNNENQLQSLLNDIEVYL 352
Query: 82 -------PKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVA 134
P D+ + ++ + H KF +L+E+LE HF+ + ++ + T+ I+F YR +V
Sbjct: 353 GPFPDILPNGDVPEIPADLVFGHNKFHKLKELLEHHFKYNNDR-QDTRAIVFIEYRDIVN 411
Query: 135 EIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEI 194
E++ +L +P+++ MFVGQ+S Q++Q + ++ FR+ N LI+TS+GEEGLD+GE+
Sbjct: 412 EVYILLLKSKPLIRPQMFVGQASQ-KQKQQIKALEDFRSNHVNVLISTSIGEEGLDVGEV 470
Query: 195 DLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIIN 253
DL+ICFD +Q SPI++VQR+GRTGRKR+G ++L+T G+E N ++++ S KI+N
Sbjct: 471 DLIICFDVSQHSPIRLVQRMGRTGRKRDGHIIVLVTDGKEHENLKSTLSKRDSLNNKILN 530
Query: 254 NKSIYANLAKNGPRMIPAHVTPRIKCLHIVV 284
+I+++L +N PRMIP TP +HI+
Sbjct: 531 TSNIFSSLYENNPRMIPNQFTPECYKMHIIA 561
>gi|47230040|emb|CAG10454.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1724
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 182/327 (55%), Gaps = 47/327 (14%)
Query: 1 MLAKDKYVKS-----KAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLV 55
+LA+D++ K+ KAQ + + +++ DF + SL E L+ GLRS +
Sbjct: 394 ILARDQFRKNPPQHIKAQH-YTSGPQQGVLEGDFALCISLYHGYELLMQMGLRSLFLYFQ 452
Query: 56 EVSKEDGSCPILGKDNDLQ------NLLQQL-----KP----KLDINIMS-------SEY 93
+ DGS + N+LQ +L Q++ KP K D N +S +
Sbjct: 453 GIM--DGSREMSRAKNELQRTPTFMDLYQEMEAMFVKPSAENKFDSNCVSLLREGSDEPF 510
Query: 94 AWSHLKFIRLREILESHFRLHAEKGE----------TTKVIIFANYRVVVAEIFDVLKPL 143
+SH K +L E++ HFRL AE +T+V+IF+++R V EI +L
Sbjct: 511 VYSHPKLQKLEEVVLQHFRLWAESSADKNGCGAQEVSTRVMIFSSFRESVQEIAAMLNRH 570
Query: 144 EPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLV 197
P+++ F+GQ+S G TQ+EQ E++ +FR G FNTL++T VGEEGLDIGE+DL+
Sbjct: 571 APLIRVMTFMGQASAGKGVKGFTQKEQLEVVHRFRQGGFNTLVSTCVGEEGLDIGEVDLI 630
Query: 198 ICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSI 257
+CFDAQK+P ++VQR+GRTGRKR GR V++L+ GRE + S +S + I NKS
Sbjct: 631 VCFDAQKNPTRLVQRMGRTGRKRQGRIVVILSAGREERTYNQSQSNKRSVYKAITGNKSG 690
Query: 258 YANLAKNGPRMIPAHVTPRIKCLHIVV 284
+ L N PRM+P + P + +HI
Sbjct: 691 F-RLYPNSPRMLPQGLNPTLHKMHITC 716
>gi|334310595|ref|XP_003339511.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein-like
[Monodelphis domestica]
Length = 2027
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 187/333 (56%), Gaps = 29/333 (8%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D + K + HI +I+ DF + SL E L G+RS Y L +
Sbjct: 350 ILARDLFRKKLSS--HILGGQQGIIEGDFAICISLYHGYELLQQMGMRSLYIFLCGIM-- 405
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLD------INIMSSEYAWSHLKFIRLREILE 108
DG+ + L ++ L + L I ++ +SH K +L E++
Sbjct: 406 DGTKSMTRTRNELSRNEQFMELFELLGKMFSDRHPNQIGPNDKKFIYSHPKLKKLEEVVV 465
Query: 109 SHFRLH-----AEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG----- 158
HFR +EK T+V+IF+++R V EI ++L+ +P V+ FVG +SG
Sbjct: 466 EHFRTWKDQNTSEKKCDTRVMIFSSFRDSVQEIAEMLQK-QPEVRVMTFVGHASGKSTKG 524
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
+TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSP+++VQR+GRTGR
Sbjct: 525 LTQKEQLEVVKRFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPVRLVQRMGRTGR 584
Query: 219 KRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIK 278
KR GR VI+LT+GRE + S Q+CK + K I+ S + + PRMIP + P++
Sbjct: 585 KREGRIVIILTEGREESAYNRS-QSCKRSIYKAISGNSKTFHFYQGSPRMIPDGIYPKLH 643
Query: 279 CLHIVVKDRVTPAKPSKKKPKENEKANKKSKKK 311
+ I ++ AK SK PK + K+ K
Sbjct: 644 KMFI-TQEIYEQAKQSKICPKSSVNGKKQCNSK 675
>gi|332030741|gb|EGI70417.1| Fanconi anemia group M protein [Acromyrmex echinatior]
Length = 1326
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 201/383 (52%), Gaps = 38/383 (9%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQ------ 78
I + ++ ++ A E ++ +GLR+F E + + ++ LQ+LL
Sbjct: 295 IMKTLNILLTMYHAYELMIRHGLRAF-RKFYETHSDKF---WIHNESQLQDLLHDIEAYL 350
Query: 79 ----QLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVA 134
+L P D++ + + H KF +L+E+LE HF + T+ I+F YR +V
Sbjct: 351 GPFPELYPNGDVSEIPVNIVFGHNKFHKLKELLEHHFNSVNGDRKDTRAIVFVEYRDIVN 410
Query: 135 EIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEI 194
E++ +L +P+++ MFVGQ S Q++Q + ++ FR+ N LI+TS+GEEGLD+GE+
Sbjct: 411 EVYILLLQSKPIIRPQMFVGQVSQ-KQKQQIKALEDFRSNHVNVLISTSIGEEGLDVGEV 469
Query: 195 DLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIIN 253
DL+ICFD +Q SPI++VQR+GRTGRKR+G ++L+T G+E N ++++ S KI+N
Sbjct: 470 DLIICFDVSQHSPIRLVQRMGRTGRKRDGHIIVLVTDGKEHENLKSTLSRRDSLNNKILN 529
Query: 254 NKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKA---NKKSKK 310
+I+++L N PRMIP TP +HI+ + K + K N+K N K K+
Sbjct: 530 TSNIFSSLYDNNPRMIPNQFTPECHKMHIIALPKTPNEKGKRGKKNINKKKEVFNMKQKE 589
Query: 311 KLETDGN----------SEPAGKQNKTNAKKTKKQPMMTQSNDIRTCFENITKKKKTFID 360
L GN ++ +QN+ + Q M +N I + ID
Sbjct: 590 NLCKKGNPSQSLMMRFLTDKCNEQNRDKTCNIRTQLTMQNNNTINPNNVKLLTDDNAGID 649
Query: 361 FLT---------QSSGEPVSAMD 374
FLT + S E VS MD
Sbjct: 650 FLTLYTVKKSEEEMSSEAVSKMD 672
>gi|156548982|ref|XP_001607217.1| PREDICTED: hypothetical protein LOC100123563 [Nasonia vitripennis]
Length = 1498
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 182/312 (58%), Gaps = 13/312 (4%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLK-- 81
+I + ++ ++ A E LV +GLR+FYN + S + L L+++ + +
Sbjct: 301 IIMKTLNILLTMYHAYELLVKHGLRAFYNFYITHSDKFWLDSELDLQLLLEDIKRYIGEF 360
Query: 82 ------PKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAE 135
P I + S+ + H KF +LRE+L HFR A + ++T+ I+F YR +V E
Sbjct: 361 PVIHPLPDGTIPDIPSDLKFGHNKFDKLRELLTDHFRSFAAQNKSTRAIVFVEYRDIVNE 420
Query: 136 IFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEID 195
++ +L P+++ MFVGQ+ G Q+EQ ++ FR + N LI+TSVGEEGLD+GE+D
Sbjct: 421 VYVLLLQTRPLIRPQMFVGQA-GQKQKEQLAALEDFRNDKVNVLISTSVGEEGLDVGEVD 479
Query: 196 LVICFDAQKS-PIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINN 254
L+ICFD S P ++VQR+GRTGRKR+GR VILLT+G+E ++ S K++ +
Sbjct: 480 LIICFDISSSTPTRLVQRMGRTGRKRSGRVVILLTEGKEVQTLNQALCKKDSLNSKVLQS 539
Query: 255 KSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRV-TPAKPSKKKPKENEKANKKSKKKLE 313
+I ++L ++ PRM+PA+VTP +C I +K + TP K++ + K K K +
Sbjct: 540 SNIASSLYQSSPRMVPANVTP--ECTPIFIKAQPKTPKVKGKRQQTKPPGERKPRKSKKD 597
Query: 314 TDGNSEPAGKQN 325
+ G AG ++
Sbjct: 598 SIGAGASAGGED 609
>gi|440908633|gb|ELR58630.1| Fanconi anemia group M protein, partial [Bos grunniens mutus]
Length = 2036
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 186/332 (56%), Gaps = 37/332 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 341 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 396
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS--------------EYAWSHLKF 100
DG+ + L ++ D L L +S ++ +SH K
Sbjct: 397 DGTKGMTRAKNELSRNADFMKLYDHLDSMFSHTRSTSTSGVSAIQKGGKDKKFCYSHPKL 456
Query: 101 IRLREILESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +K + T+V+IF+++R V EI ++L P +P+++ FVG
Sbjct: 457 KKLEEVVVEHFKSWNARKTSDKKCDETRVMIFSSFRDSVQEIAEMLLPHQPIIRVMTFVG 516
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR+G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++
Sbjct: 517 HASGKSMKGFTQKEQLEVVKQFRSGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRL 576
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
+QR+GRTGRKR GR V++L +GRE + S +S + I N+ + + + PRM+
Sbjct: 577 IQRMGRTGRKRQGRIVVILAEGREERTYNQSQCNKRSIYKAISGNRQVL-HFYQGSPRMV 635
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSKKKPKEN 301
P V P++ + + P KPS+ P+++
Sbjct: 636 PDGVNPQLHKM-FITHGVYEPEKPSRNLPRKS 666
>gi|359077950|ref|XP_003587635.1| PREDICTED: Fanconi anemia group M protein [Bos taurus]
Length = 2011
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 186/332 (56%), Gaps = 37/332 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 315 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 370
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS--------------EYAWSHLKF 100
DG+ + L ++ D L L +S ++ +SH K
Sbjct: 371 DGTKGMTRAKNELSRNADFMKLYDHLDSMFSHTRSTSTSGVSAIQKGGKDKKFCYSHPKL 430
Query: 101 IRLREILESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +K + T+V+IF+++R V EI ++L P +P+++ FVG
Sbjct: 431 KKLEEVVVEHFKSWNARKTSDKKCDETRVMIFSSFRDSVQEIAEMLLPHQPIIRVMTFVG 490
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR+G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++
Sbjct: 491 HASGKSMKGFTQKEQLEVVKQFRSGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRL 550
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
+QR+GRTGRKR GR V++L +GRE + S +S + I N+ + + + PRM+
Sbjct: 551 IQRMGRTGRKRQGRIVVILAEGREERTYNQSQCNKRSIYKAISGNRQVL-HFYQGSPRMV 609
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSKKKPKEN 301
P V P++ + + P KPS+ P+++
Sbjct: 610 PDGVNPQLHKM-FITHGVYEPEKPSRNLPRKS 640
>gi|375298275|ref|NP_001098446.2| Fanconi anemia, complementation group M [Bos taurus]
Length = 2037
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 186/332 (56%), Gaps = 37/332 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 341 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 396
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS--------------EYAWSHLKF 100
DG+ + L ++ D L L +S ++ +SH K
Sbjct: 397 DGTKGMTRAKNELSRNADFMKLYDHLDSMFSHTRSTSTSGVSAIQKGGKDKKFCYSHPKL 456
Query: 101 IRLREILESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +K + T+V+IF+++R V EI ++L P +P+++ FVG
Sbjct: 457 KKLEEVVVEHFKSWNARKTSDKKCDETRVMIFSSFRDSVQEIAEMLLPHQPIIRVMTFVG 516
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR+G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++
Sbjct: 517 HASGKSMKGFTQKEQLEVVKQFRSGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRL 576
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
+QR+GRTGRKR GR V++L +GRE + S +S + I N+ + + + PRM+
Sbjct: 577 IQRMGRTGRKRQGRIVVILAEGREERTYNQSQCNKRSIYKAISGNRQVL-HFYQGSPRMV 635
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSKKKPKEN 301
P V P++ + + P KPS+ P+++
Sbjct: 636 PDGVNPQLHKM-FITHGVYEPEKPSRNLPRKS 666
>gi|256086569|ref|XP_002579470.1| hypothetical protein [Schistosoma mansoni]
gi|353229673|emb|CCD75844.1| hypothetical protein Smp_083710 [Schistosoma mansoni]
Length = 1357
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 175/337 (51%), Gaps = 60/337 (17%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDG 62
A++K+ S FP IN + IQ DF + L LE LV +GLR Y L V +
Sbjct: 366 AREKW--SSQTFPSINSTENSSIQCDFALVICLLHGLELLVQHGLRPLYRYLEGVYSGNR 423
Query: 63 SCPI----LGKDNDLQNLLQQLKPKLDINIMSSEYAW------------------SHLKF 100
+ + L K ++ +L +L + +N+ ++ W H K
Sbjct: 424 ASSLVRSQLNKLPNMNHLWTELAQRFGMNVECTDGTWKQELIHADLLHSQAPFLAGHPKL 483
Query: 101 IRLREILESHFRLHAEKG----ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
+LR+IL HF K +T+ I+F +R V EI +LKPL+P+++ + F+GQ
Sbjct: 484 DKLRDILLGHFNFEDRKNTHEQSSTRAIVFTQFRDSVEEIMHMLKPLKPLIRPASFIGQG 543
Query: 157 ---------------------------SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
SG++Q++Q +M FR+G +NTL++T +GEEG+
Sbjct: 544 TRVNGSPQLTNQYESPNLKNSRLSNAHSGISQRDQIRVMDGFRSGVYNTLVSTCIGEEGI 603
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVE 249
D+G++DL++CFDA KSPI+++QR GRTGRKR GR V+LLT+GRE N S+ S V
Sbjct: 604 DVGQVDLIVCFDASKSPIQLMQRQGRTGRKRLGRIVVLLTEGREERNHAVSIARTSS-VH 662
Query: 250 KIINNKSIYANLA--KNGPRMIPAHVTPRI--KCLHI 282
K + + Y LA + PRM+P V P++ KCL I
Sbjct: 663 KALLEGNAYCKLAFYPHNPRMVPIGVHPKLQFKCLRI 699
>gi|358418015|ref|XP_003583812.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein [Bos
taurus]
Length = 2037
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 186/332 (56%), Gaps = 37/332 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 341 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 396
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS--------------EYAWSHLKF 100
DG+ + L ++ D L L +S ++ +SH K
Sbjct: 397 DGTKGMTRAKNELSRNADFMKLYDHLDSMFSHTRSTSTSGVSAIQKGGKDKKFCYSHPKL 456
Query: 101 IRLREILESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +K + T+V+IF+++R V EI ++L P +P+++ FVG
Sbjct: 457 KKLEEVVVEHFKSWNARKTSDKKCDETRVMIFSSFRDSVQEIAEMLLPHQPIIRVMTFVG 516
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR+G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++
Sbjct: 517 HASGKSMKGFTQKEQLEVVKQFRSGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRL 576
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
+QR+GRTGRKR GR V++L +GRE + S +S + I N+ + + + PRM+
Sbjct: 577 IQRMGRTGRKRQGRIVVILAEGREERTYNQSQCNKRSIYKAISGNRQVL-HFYQGSPRMV 635
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSKKKPKEN 301
P V P++ + + P KPS+ P+++
Sbjct: 636 PDGVNPQLHKM-FITHGVYEPDKPSRNLPRKS 666
>gi|363735044|ref|XP_003641500.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein
homolog [Gallus gallus]
Length = 1880
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 174/317 (54%), Gaps = 38/317 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D+Y K+ + P +I+ DF + SL E L G+RS + L +
Sbjct: 295 ILARDQYRKNPS--PQNVGMQPGIIEGDFALCISLYHGYELLQQMGVRSLFIYLCGIM-- 350
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS-------------EYAWSHLKFI 101
DGS + LG++ D L QQL +S E+ +SH K
Sbjct: 351 DGSKGLTRTKNELGRNEDFMRLYQQLTDMFSDTCQTSANGNLHKMSENKKEFIYSHPKLK 410
Query: 102 RLREILESHFR-----LHAEKGET---TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFV 153
+L EI+ HF+ G T T+V+IF+++R V EI ++L P+V+ FV
Sbjct: 411 KLEEIVIEHFKSRKMGYQTTSGGTCVDTRVMIFSSFRDSVQEIAEMLSRFSPVVRVMTFV 470
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G S+G TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI+
Sbjct: 471 GHSTGKSTKGFTQKEQLEVVKRFREGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIR 530
Query: 209 MVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRM 268
+VQR+GRTGR+R GR V++L +GRE + S +S + I NK + ++ PRM
Sbjct: 531 LVQRMGRTGRQRQGRVVVILAEGREERTYNQSQSNRRSIQKAISGNKML--XFYQHSPRM 588
Query: 269 IPAHVTPRIKCLHIVVK 285
IP + P + + I +
Sbjct: 589 IPEGINPELHRMFITAE 605
>gi|260836711|ref|XP_002613349.1| hypothetical protein BRAFLDRAFT_118736 [Branchiostoma floridae]
gi|229298734|gb|EEN69358.1| hypothetical protein BRAFLDRAFT_118736 [Branchiostoma floridae]
Length = 2342
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 176/321 (54%), Gaps = 21/321 (6%)
Query: 18 NRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYN---NLVEVSKEDGSCPILGKDNDLQ 74
NR L ++ DF SL E L+ +G++SFY+ N++E K L ++ D
Sbjct: 365 NRVLQGCVEGDFATCISLYHGYELLLQHGMKSFYSFLANIMEDEKGSKKKRELAQNPDFM 424
Query: 75 NLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVA 134
++ +LK + S+ + S + +E S + A K T+V+IFA YR V
Sbjct: 425 LMMGELKEMFN----PSDGSASVGGYAHGQEAAGSSTQA-ATKPAATRVMIFAQYRDSVQ 479
Query: 135 EIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
EI D+L P+V+ F+GQ+S G TQ+EQ +MKKFR G +N L++T VGEEG
Sbjct: 480 EIADILNHHRPLVRVMTFIGQASTGKVKKGFTQKEQLAVMKKFREGGYNVLVSTCVGEEG 539
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYV 248
LDIG++DL++CFDA KSPI++VQR+GRTGRKR GR V+L+T+G+E + S Q K +
Sbjct: 540 LDIGDVDLIVCFDAHKSPIRLVQRMGRTGRKRQGRIVMLVTEGKEERIYNQS-QYSKKSI 598
Query: 249 EKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKS 308
K + + N N PRM+P V P + +HI V AK ++ + + K
Sbjct: 599 HKALQGSTRSLNFYMNNPRMVPRGVNPAVHKMHITVGSYHCTAK------GKDRRGSVKG 652
Query: 309 KKKLETDGNSEPAGKQNKTNA 329
K + + ++P GK K +
Sbjct: 653 SKAITSFTKAQPKGKVEKDDG 673
>gi|344273425|ref|XP_003408522.1| PREDICTED: Fanconi anemia group M protein [Loxodonta africana]
Length = 2066
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 180/325 (55%), Gaps = 37/325 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F V SL E L G+RS Y L +
Sbjct: 338 ILARDQFRKNPS--PNIVGLQQGIIEGEFAVCISLYHGYELLQQMGMRSLYLFLCGIM-- 393
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSSE--------------YAWSHLKF 100
DG+ + LG++ D L L+ +SE + +SH K
Sbjct: 394 DGTKGMTRTKNELGRNEDFMKLFSHLEGMFAHTRNTSESGVSAIRKGDKDKKFFYSHPKL 453
Query: 101 IRLREILESHFRLHAE------KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ + K + T+V+IF+++R V EI ++L +P++K FVG
Sbjct: 454 KKLEEVVVQHFKSWNDQNTSKKKCDETRVMIFSSFRDSVQEIAEMLFQHQPVIKVMTFVG 513
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SSG T +EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++
Sbjct: 514 HSSGKSTKGFTHKEQVEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRL 573
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L +GRE + S +S + I N+ + + + PRM+
Sbjct: 574 VQRMGRTGRKRQGRIVVILAEGREERTYNQSQSNKRSIYKAISGNRQVL-HFYQGSPRMV 632
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPS 294
P +TP + + + P KPS
Sbjct: 633 PDGITPELHKM-FITHGVYEPEKPS 656
>gi|348680236|gb|EGZ20052.1| hypothetical protein PHYSODRAFT_312887 [Phytophthora sojae]
Length = 890
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 155/275 (56%), Gaps = 18/275 (6%)
Query: 22 DRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE--DGSCPILGKDNDLQNLLQQ 79
R + D + SL A L +GL SF + ++ ++E G ++ + Q
Sbjct: 493 SRSAESDLALLVSLLHAKSLLTGHGLSSFRDQILNWAEERKKGKMSWSKREMLQSSEFQS 552
Query: 80 LKPKLDI--NIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIF 137
L+ L + SS SH K ++LRE+L HF+ H+ G +T+ I+F YRV V+EI
Sbjct: 553 LELSLGVTEGATSSANTASHPKLVKLREVLLEHFQRHSAAGSSTRAIVFTQYRVSVSEIV 612
Query: 138 DVLKPLEPMVKASMFVGQSS--------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
+L+PL P++ F+GQ S G TQ+ Q+EI+++FR GEFN L+AT + EEGL
Sbjct: 613 ALLRPLSPLLNVQPFIGQGSSGKSKENKGQTQKVQQEIVRRFRLGEFNVLVATCIAEEGL 672
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVE 249
DIGE+DL++ FDA SP++M+QR+GRTGRKR GR +IL+T+G E S K+
Sbjct: 673 DIGEVDLIVSFDALTSPVRMIQRMGRTGRKRVGRVIILVTEGDEQKKLARSASAAKTVSR 732
Query: 250 KIIN--NKSIYANLAKNGPRMIPAHVTPRIKCLHI 282
+ NK Y+ PRMIP + P +K L +
Sbjct: 733 ALTTYKNKFKYSKC----PRMIPTGICPALKELEM 763
>gi|119586186|gb|EAW65782.1| Fanconi anemia, complementation group M, isoform CRA_b [Homo
sapiens]
Length = 2083
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNHLECMFARTRSTSANGISAIQQGDKNKKFVYSHPKL 450
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 451 KKLEEVVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 510
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 511 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 570
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR VI+L++GRE + S +S + I +N+ + + + PRM+
Sbjct: 571 VQRMGRTGRKRQGRIVIILSEGREERIYNQSQSNKRSIYKAISSNRQVL-HFYQRSPRMV 629
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + + P KPS+
Sbjct: 630 PDGINPKLHKM-FITHGVYEPEKPSR 654
>gi|74959747|ref|NP_065988.1| Fanconi anemia group M protein [Homo sapiens]
gi|78099254|sp|Q8IYD8.2|FANCM_HUMAN RecName: Full=Fanconi anemia group M protein; Short=Protein FACM;
AltName: Full=ATP-dependent RNA helicase FANCM; AltName:
Full=Fanconi anemia-associated polypeptide of 250 kDa;
Short=FAAP250; AltName: Full=Protein Hef ortholog
gi|71912519|gb|AAZ53290.1| Fanconi anemia complementation group M [Homo sapiens]
gi|119586185|gb|EAW65781.1| Fanconi anemia, complementation group M, isoform CRA_a [Homo
sapiens]
gi|162319388|gb|AAI56491.1| Fanconi anemia, complementation group M [synthetic construct]
Length = 2048
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNHLECMFARTRSTSANGISAIQQGDKNKKFVYSHPKL 450
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 451 KKLEEVVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 510
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 511 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 570
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR VI+L++GRE + S +S + I +N+ + + + PRM+
Sbjct: 571 VQRMGRTGRKRQGRIVIILSEGREERIYNQSQSNKRSIYKAISSNRQVL-HFYQRSPRMV 629
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + + P KPS+
Sbjct: 630 PDGINPKLHKM-FITHGVYEPEKPSR 654
>gi|187954507|gb|AAI40777.1| FANCM protein [Homo sapiens]
gi|219518301|gb|AAI44512.1| FANCM protein [Homo sapiens]
Length = 2022
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 309 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 364
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 365 DGTKGMTRSKNELGRNEDFMKLYNHLECMFARTRSTSANGISAIQQGDKNKKFVYSHPKL 424
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 425 KKLEEVVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 484
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 485 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 544
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR VI+L++GRE + S +S + I +N+ + + + PRM+
Sbjct: 545 VQRMGRTGRKRQGRIVIILSEGREERIYNQSQSNKRSIYKAISSNRQVL-HFYQRSPRMV 603
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + + P KPS+
Sbjct: 604 PDGINPKLHKM-FITHGVYEPEKPSR 628
>gi|23273574|gb|AAH36056.1| FANCM protein [Homo sapiens]
gi|119586188|gb|EAW65784.1| Fanconi anemia, complementation group M, isoform CRA_d [Homo
sapiens]
gi|325463111|gb|ADZ15326.1| Fanconi anemia, complementation group M [synthetic construct]
Length = 669
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNHLECMFARTRSTSANGISAIQQGDKNKKFVYSHPKL 450
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 451 KKLEEVVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 510
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 511 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 570
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR VI+L++GRE + S +S + I +N+ + + + PRM+
Sbjct: 571 VQRMGRTGRKRQGRIVIILSEGREERIYNQSQSNKRSIYKAISSNRQVL-HFYQRSPRMV 629
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + I P KPS+
Sbjct: 630 PDGINPKLHKMFI-THGVYEPEKPSR 654
>gi|426376789|ref|XP_004055168.1| PREDICTED: Fanconi anemia group M protein isoform 2 [Gorilla
gorilla gorilla]
Length = 2022
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 309 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 364
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 365 DGTKGMTRSKNELGRNEDFMKLYNYLECMFARTRSTSANGISAIQQGDKNKKFVYSHPKL 424
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 425 KKLEEVVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 484
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 485 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 544
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR VI+L++GRE + S +S + I +N+ + + + PRM+
Sbjct: 545 VQRMGRTGRKRQGRIVIILSEGREERIYNQSQSNKRSIYKAISSNRQVL-HFYQRSPRMV 603
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + + P KPS+
Sbjct: 604 PDGINPKLHKM-FITHGVYEPEKPSR 628
>gi|397523573|ref|XP_003831802.1| PREDICTED: Fanconi anemia group M protein isoform 2 [Pan paniscus]
Length = 2022
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 309 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 364
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 365 DGTKGMTRSKNELGRNEDFMKLYNHLECMFARTRSTSANGISAIQQGDKNKKFVYSHPKL 424
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 425 KKLEEVVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 484
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 485 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 544
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L++GRE + S +S + I +N+ + + + PRM+
Sbjct: 545 VQRMGRTGRKRQGRIVVILSEGREERIYNQSQSNKRSIYKAISSNRQVL-HFYQRSPRMV 603
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + + P KPS+
Sbjct: 604 PDGINPKLHKM-FITHGVYEPEKPSR 628
>gi|21752288|dbj|BAC04159.1| unnamed protein product [Homo sapiens]
Length = 669
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNHLECMFARTRSTSANGISAIQQGDKNKKFVYSHPKL 450
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 451 KKLEEVVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 510
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 511 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 570
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR VI+L++GRE + S +S + I +N+ + + + PRM+
Sbjct: 571 VQRMGRTGRKRQGRIVIILSEGREERIYNQSQSNKRSIYKAISSNRQVL-HFYQRSPRMV 629
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + I P KPS+
Sbjct: 630 PDGINPKLHKMFI-THGVYEPEKPSR 654
>gi|397523571|ref|XP_003831801.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Pan paniscus]
Length = 2048
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNHLECMFARTRSTSANGISAIQQGDKNKKFVYSHPKL 450
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 451 KKLEEVVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 510
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 511 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 570
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L++GRE + S +S + I +N+ + + + PRM+
Sbjct: 571 VQRMGRTGRKRQGRIVVILSEGREERIYNQSQSNKRSIYKAISSNRQVL-HFYQRSPRMV 629
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + + P KPS+
Sbjct: 630 PDGINPKLHKM-FITHGVYEPEKPSR 654
>gi|426376787|ref|XP_004055167.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Gorilla
gorilla gorilla]
Length = 2048
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNYLECMFARTRSTSANGISAIQQGDKNKKFVYSHPKL 450
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 451 KKLEEVVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 510
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 511 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 570
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR VI+L++GRE + S +S + I +N+ + + + PRM+
Sbjct: 571 VQRMGRTGRKRQGRIVIILSEGREERIYNQSQSNKRSIYKAISSNRQVL-HFYQRSPRMV 629
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + + P KPS+
Sbjct: 630 PDGINPKLHKM-FITHGVYEPEKPSR 654
>gi|410339047|gb|JAA38470.1| Fanconi anemia, complementation group M [Pan troglodytes]
Length = 2048
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKP------KLDINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNHLECVFARTRSTSANGISAIQQGDKNKKFVYSHPKL 450
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 451 KKLEEVVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 510
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 511 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 570
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L++GRE + S +S + I +N+ + + + PRM+
Sbjct: 571 VQRMGRTGRKRQGRIVVILSEGREERIYNQSQSNKRSIYKAISSNRQVL-HFYQRSPRMV 629
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + + P KPS+
Sbjct: 630 PDGINPKLHKM-FITHGVYEPEKPSR 654
>gi|332842130|ref|XP_003314350.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Pan
troglodytes]
Length = 2022
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 309 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 364
Query: 61 DGSCPI------LGKDNDLQNLLQQLKP------KLDINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 365 DGTKGMTRSKNELGRNEDFMKLYNHLECVFARTRSTSANGISAIQQGDKNKKFVYSHPKL 424
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 425 KKLEEVVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 484
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 485 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 544
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L++GRE + S +S + I +N+ + + + PRM+
Sbjct: 545 VQRMGRTGRKRQGRIVVILSEGREERIYNQSQSNKRSIYKAISSNRQVL-HFYQRSPRMV 603
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + + P KPS+
Sbjct: 604 PDGINPKLHKM-FITHGVYEPEKPSR 628
>gi|114652855|ref|XP_509928.2| PREDICTED: Fanconi anemia group M protein isoform 2 [Pan
troglodytes]
Length = 2048
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKP------KLDINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNHLECVFARTRSTSANGISAIQQGDKNKKFVYSHPKL 450
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 451 KKLEEVVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 510
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 511 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 570
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L++GRE + S +S + I +N+ + + + PRM+
Sbjct: 571 VQRMGRTGRKRQGRIVVILSEGREERIYNQSQSNKRSIYKAISSNRQVL-HFYQRSPRMV 629
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + + P KPS+
Sbjct: 630 PDGINPKLHKM-FITHGVYEPEKPSR 654
>gi|332229232|ref|XP_003263795.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Nomascus
leucogenys]
Length = 2050
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNHLECMFAHTRSTSANGISAIQQGDKNKKFVYSHPKL 450
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 451 KKLEEVVIEHFKSWNAENTSEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 510
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 511 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 570
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L++GRE + S Q+ K + K I++ + + PRM+
Sbjct: 571 VQRMGRTGRKRQGRIVVILSEGREERIYNQS-QSNKRNIYKAISSNRQVLHFYQRSPRMV 629
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + I P KPS+
Sbjct: 630 PDGINPKLHKMFI-THGVYEPEKPSR 654
>gi|165972365|ref|NP_001107132.1| Fanconi anemia, complementation group M [Danio rerio]
gi|126843130|gb|ABO27624.1| Fanconi anemia M [Danio rerio]
Length = 1761
Score = 186 bits (473), Expect = 2e-44, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 180/304 (59%), Gaps = 30/304 (9%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDR-MIQRDFHVTHSLASALENLVTYGLRS---FYNNLVE 56
+LA++++ ++ PHI + +++ DF + SL E L+ G+RS F N+
Sbjct: 306 ILAREQFRRNPP--PHIQGPQQQGVLEGDFALLISLYHGFELLLQMGIRSLFLFIQNIFT 363
Query: 57 VSKEDGSCPILGKDNDLQ--NLLQQLKPKLD--INIMS----SEYAWSHLKFIRLREILE 108
+E N+LQ +L L +++ N S Y ++H K +L E++
Sbjct: 364 GPRESSRV-----RNELQRCSLFMDLYREMENMFNTASRGLEEPYVYTHPKLQKLDEVVL 418
Query: 109 SHFRLHAEKGET----TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------G 158
HF+ AE + T+V+IF++YR V EI ++L +P+V+ F+GQ+S G
Sbjct: 419 RHFQTCAESSDVSAVDTRVMIFSSYRESVQEIAEMLNRHQPLVRVMTFMGQASAGRGVRG 478
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
TQ+EQ E++ +FR G FNTL++T VGEEGLDIGE+DL++CFDAQKSPI++VQR+GRTGR
Sbjct: 479 FTQKEQLEVVWRFREGGFNTLVSTCVGEEGLDIGEVDLIVCFDAQKSPIRLVQRMGRTGR 538
Query: 219 KRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIK 278
+R GR V++L +GRE + S +S + I+ NK + + + PRM+PA VTP +
Sbjct: 539 QRQGRIVVILAEGREERTYNQSQSNRRSINKSIMGNKHSF-QMFSDSPRMLPADVTPALH 597
Query: 279 CLHI 282
+HI
Sbjct: 598 KMHI 601
>gi|332229234|ref|XP_003263796.1| PREDICTED: Fanconi anemia group M protein isoform 2 [Nomascus
leucogenys]
Length = 2024
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 188/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 309 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 364
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 365 DGTKGMTRSKNELGRNEDFMKLYNHLECMFAHTRSTSANGISAIQQGDKNKKFVYSHPKL 424
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 425 KKLEEVVIEHFKSWNAENTSEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 484
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 485 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 544
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L++GRE + S Q+ K + K I++ + + PRM+
Sbjct: 545 VQRMGRTGRKRQGRIVVILSEGREERIYNQS-QSNKRNIYKAISSNRQVLHFYQRSPRMV 603
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + I P KPS+
Sbjct: 604 PDGINPKLHKMFI-THGVYEPEKPSR 628
>gi|297695020|ref|XP_002824758.1| PREDICTED: Fanconi anemia group M protein [Pongo abelii]
Length = 1967
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 186/326 (57%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIMGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS--------EYAWSHLKF 100
DG+ + LG++ D L L+ N +S+ ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNHLECMFAHTRSTSANGISAIQQGDKHKKFVYSHPKL 450
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 451 KKLEEVVIEHFKSWNAENTSEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 510
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 511 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 570
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
+QR+GRTGRKR GR V++L++GRE + S +S + I N+ + + PRM+
Sbjct: 571 IQRMGRTGRKRQGRIVVILSEGREERIYNQSQSNKRSIYKAISGNRQVL-RFYQRSPRMV 629
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + + P KPS+
Sbjct: 630 PDGINPKLHKM-FITHGVYEPEKPSR 654
>gi|295148218|ref|NP_001171151.1| Fanconi anemia, complementation group M [Xenopus laevis]
gi|223929916|gb|ACN24616.1| Fanconi anemia protein [Xenopus laevis]
Length = 2166
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 177/325 (54%), Gaps = 44/325 (13%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPI------LGKDNDLQNLL 77
+I+ D+ + SL E L+ G RS Y+ L + DGS + L ++ D L
Sbjct: 458 VIEGDYALCISLYHGYELLLQMGTRSLYSYLHGII--DGSKGMTRARNELSRNGDFMELY 515
Query: 78 QQLKPKL-DINIMSSE----------------YAWSHLKFIRLREILESHFRLHA----- 115
+QL+ D + + +SH K +L E++ HF+
Sbjct: 516 KQLEKMFSDTKVAEGNGSLLFNSSLRADAKKPFLYSHPKLKKLEEVVVQHFKSWKNGDQN 575
Query: 116 ---EKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKE 166
+ E T+++IF+++R V EI ++L P V+ FVG SS G TQ+EQ E
Sbjct: 576 SSNQTPEGTRIMIFSSFRDSVQEIAEMLNHHHPTVRVMTFVGHSSAGKGVKGFTQKEQLE 635
Query: 167 IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVI 226
++K+FR G FNTL++T VGEEGLDIGE+DL+ICFDAQKSPI++VQR+GRTGRKR GR V+
Sbjct: 636 VVKRFREGGFNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLVQRMGRTGRKRQGRIVV 695
Query: 227 LLTQGREAHNFQTSMQTCKSYVEKII-NNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVK 285
+L QGRE + S +S + I+ NNK ++ L PRM+P + P++ + I
Sbjct: 696 ILCQGREERTYNQSQSNKRSIYKAILGNNKMLH--LHPQSPRMVPEGLNPKVHKMFITQG 753
Query: 286 DRVTPAKPSKKKPKENEKANKKSKK 310
+ AK S + E+ +++ K +K
Sbjct: 754 N--YEAKESIRPMNEDRRSSTKHRK 776
>gi|350579040|ref|XP_003480507.1| PREDICTED: Fanconi anemia group M protein [Sus scrofa]
Length = 2053
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 178/314 (56%), Gaps = 36/314 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 344 ILARDQFRKNPS--PNIVGMQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 399
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS--------------EYAWSHLKF 100
DG+ + L ++ D L L+ +S ++ +SH K
Sbjct: 400 DGTKGMTRAKNELSRNEDFMKLYNHLEYMFAHTRSTSTSGISAIQKGDKDKKFCYSHPKL 459
Query: 101 IRLREILESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 460 KKLEEVVVEHFKSWNAQNTSDKKCDKTRVMIFSSFRDSVQEIAEMLLRHQPIIRVMTFVG 519
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR+G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++
Sbjct: 520 HASGKSMKGFTQKEQLEVVKQFRSGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRL 579
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L +GRE + S +S + I NK + + + PRM+
Sbjct: 580 VQRMGRTGRKRQGRIVVILAEGREERTYNQSQSNKRSIYKAISGNKQVL-HFYQGSPRMV 638
Query: 270 PAHVTPRIKCLHIV 283
P ++P++ + I
Sbjct: 639 PEGISPQLHKMFIA 652
>gi|296214902|ref|XP_002753903.1| PREDICTED: Fanconi anemia group M protein [Callithrix jacchus]
Length = 2043
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 188/324 (58%), Gaps = 35/324 (10%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS------EYAWSHLKFIR 102
DG+ + L ++ D L + L+ N +S+ ++ + H K +
Sbjct: 391 DGTKGMTRSKNELSRNEDFMKLYKHLECMFAHTRSTSANGISAIQQGDKKFVYGHPKLKK 450
Query: 103 LREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG +
Sbjct: 451 LEEVVIEHFKSWNAENTSGKKRDKTRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVGHA 510
Query: 157 SG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++VQ
Sbjct: 511 SGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQ 570
Query: 212 RLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPA 271
R+GRTGRKR GR V++L++GRE + S ++ + I +N+ I + + PRM+P
Sbjct: 571 RMGRTGRKRQGRIVVILSEGREERIYNQSQSNKRNIYKAISSNRQIL-HFYQGSPRMVPD 629
Query: 272 HVTPRIKCLHIVVKDRVTPAKPSK 295
+ P++ + + + P KPS+
Sbjct: 630 GINPKLHKM-FITRGVYEPEKPSR 652
>gi|73963567|ref|XP_537429.2| PREDICTED: Fanconi anemia group M protein [Canis lupus familiaris]
Length = 2047
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 178/324 (54%), Gaps = 37/324 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS--------------EYAWSHLKF 100
DG+ + L ++ D L L +S ++ +SH K
Sbjct: 391 DGTKGMTRAKNELSRNEDFMKLYNHLACMFAHTCGTSANGFSTIQKGDKDKKFFYSHPKL 450
Query: 101 IRLREILESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 451 KKLEEVVLEHFKSWNIQNTSEKKCDETRVMIFSSFRDSVQEIAEMLLQHQPVIRVMTFVG 510
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR+G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++
Sbjct: 511 HASGKSMKGFTQKEQLEVVKQFRSGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRL 570
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L +GRE + S +S + I N+ + + + PRM+
Sbjct: 571 VQRMGRTGRKRKGRIVVILAEGREERTYNQSQSNKRSIYKAISGNRQVL-HFYQGSPRMV 629
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKP 293
P + P + + I P KP
Sbjct: 630 PDGINPELHKMFITCA-AYEPEKP 652
>gi|339245571|ref|XP_003378711.1| fanconi anemia group M protein [Trichinella spiralis]
gi|316972366|gb|EFV56044.1| fanconi anemia group M protein [Trichinella spiralis]
Length = 1800
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 192/347 (55%), Gaps = 47/347 (13%)
Query: 4 KDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGS 63
+DKY +A +RD R I+ FH SL E + +G +S +N L + D +
Sbjct: 387 RDKY---RANTNANSRDRSR-IESLFHGAISLYHGYELMTMHGFKSLFNYLTDKVIGDQA 442
Query: 64 CPILGK----DNDLQNLLQQLKPKLDIN---------------IMSSEYAW--------- 95
P L + + + + Q L+ D N SE W
Sbjct: 443 TPRLRQQLSCNCEFLDAYQTLRQTFDSNEQILKATQSKFANTDFNYSEEEWNNRVLETLQ 502
Query: 96 ----SHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
SH K ++L EIL HF+ + EK +T+VI+F++YR V+EI ++L L P++KA
Sbjct: 503 LAKTSHPKMVKLIEILLDHFQKNKEKQLSTRVIVFSSYRDSVSEITEMLNNLRPLIKAMK 562
Query: 152 FVGQS------SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKS 205
FVGQS G++Q++Q E++K+F+ G +NTL++T VGEEGLDIGE+DL++C+D+ S
Sbjct: 563 FVGQSYGRSTSKGISQKKQLEVVKEFQRGCYNTLVSTCVGEEGLDIGEVDLIVCYDSPTS 622
Query: 206 PIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNG 265
PI++VQR+GRT RKR G +IL+T+G+E N Q+ ++ K+ + + I ++ + + N
Sbjct: 623 PIRLVQRMGRTARKREGEILILVTKGKE-QNMQSHSESTKNRIHRAIGARTNFTMYSSN- 680
Query: 266 PRMIPAHVTPRIKCLHIV-VKDRVTPAKPSKKKPKENEKANKKSKKK 311
PRMIP + P +CL ++ + D+ + K+ E+ + ++ K+
Sbjct: 681 PRMIPRDLKP--ECLKLLMIHDKPYKSNSRKQDSAEDSATHYEAYKQ 725
>gi|431893730|gb|ELK03551.1| Fanconi anemia group M protein [Pteropus alecto]
Length = 2039
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 182/324 (56%), Gaps = 35/324 (10%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F V SL E L G+RS Y L +
Sbjct: 339 ILARDQFRKNPS--PNIVGVQQGIIEGEFAVCISLYHGYELLQQMGMRSLYFFLCGIM-- 394
Query: 61 DGSCPILGKDNDLQNLLQQLKPKLDINIMSS------------------EYAWSHLKFIR 102
DG+ + N+L+ +K + M + ++ +SH K +
Sbjct: 395 DGTKGMTRAKNELRRNEDFMKLYNHLECMFAHTRSTSASSISTIQKGDKDFFYSHPKLKK 454
Query: 103 LREILESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
L EI+ HF+ +K + T+V+IF+++R V EI ++L +P+++ FVG +
Sbjct: 455 LEEIVVEHFKSWNAQNTSEKKCDKTRVMIFSSFRDSVQEIAEMLLQHQPIIRVMTFVGHA 514
Query: 157 SG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
SG TQ+EQ E++K+FR+G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI+++Q
Sbjct: 515 SGKSMKGFTQKEQLEVVKQFRSGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLIQ 574
Query: 212 RLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPA 271
R+GRTGRKR GR V++L +GRE + S Q+ K + + I+ + + PRM+P
Sbjct: 575 RMGRTGRKRQGRIVVILAEGREERTYNQS-QSNKRNIYRAISGNKQALHFYQRSPRMVPD 633
Query: 272 HVTPRIKCLHIVVKDRVTPAKPSK 295
+ P + + I + P KPS+
Sbjct: 634 GINPELHKMSI-INGVYQPEKPSR 656
>gi|241568989|ref|XP_002402624.1| conserved hypothetical protein [Ixodes scapularis]
gi|215500065|gb|EEC09559.1| conserved hypothetical protein [Ixodes scapularis]
Length = 1081
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 160/281 (56%), Gaps = 18/281 (6%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPI----LGKDNDLQNLLQQL 80
+Q DF + SL A E L+ +GLR F++ L + + S P L L L
Sbjct: 357 LQGDFSLLISLYHAYELLLAHGLRPFFHFLKGIVDGEKSQPRVRYELMHHPGFNELYTDL 416
Query: 81 KPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVL 140
K +L ++ + H K I+L EI+ HF+ + ET +V+IF+ YR V EI L
Sbjct: 417 KERLGVSSVVG-----HPKLIKLEEIVLDHFKNFGKSAET-RVMIFSQYRDSVKEISSYL 470
Query: 141 KPLEPMVKASMFVGQ------SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEI 194
P++KA F+GQ + G TQ+EQ ++K+FR G +N L++T VGEEGLDIGEI
Sbjct: 471 NRHRPLIKAMNFMGQNQKTGTARGFTQKEQLLVVKRFRDGGYNVLVSTCVGEEGLDIGEI 530
Query: 195 DLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINN 254
DL++C+DA KSPI++VQR+GRTGRKR GR V+LL++G+E ++ S + K V + I N
Sbjct: 531 DLIVCYDAPKSPIRLVQRMGRTGRKRAGRIVVLLSEGKEEQAYRES-NSKKQTVHRAILN 589
Query: 255 KSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSK 295
L + P M+P +TP + + V + PA SK
Sbjct: 590 GGRLGGLYQGAPTMVPRGITPSCHRMFMTVPE-YRPAGGSK 629
>gi|340373955|ref|XP_003385505.1| PREDICTED: Fanconi anemia group M protein [Amphimedon
queenslandica]
Length = 1211
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 162/280 (57%), Gaps = 30/280 (10%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPI--LGKDNDLQNLLQQLKP 82
I+ F + SL A E L+ +G+RSFY L E E S L +D + ++ L
Sbjct: 347 IEGIFCLCISLFHAYELLLQHGMRSFYVFLKESVSEGYSRAKMELSYSHDFKKMMSFLDS 406
Query: 83 KL------DINIMSSEYA----------WSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
K+ + + SS Y +SH K L +++ SHF + G TKV+IF
Sbjct: 407 KMTEAVNTSLQLNSSMYCPSVKPTADFFYSHPKLKELEKVVLSHFE--SSSGSPTKVMIF 464
Query: 127 ANYRVVVAEIFDVLKPLEPMVKASMFVGQSS---------GVTQQEQKEIMKKFRAGEFN 177
+ YR V EI D+L P+++ F+G SS G TQ+EQ E++ KFR G +N
Sbjct: 465 SQYRESVREIADMLSRHFPVIQVMSFIGHSSTGKNKSGGKGQTQKEQIEVIMKFREGGYN 524
Query: 178 TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNF 237
TL++T VGEEGLDIGE+DL++CFDA KSP++++QR+GRTGRKR GR V++++QG+E +
Sbjct: 525 TLVSTCVGEEGLDIGEVDLIVCFDAHKSPVRLIQRMGRTGRKRQGRIVVIVSQGKEEQIY 584
Query: 238 QTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
S Q+ K+ V + I + S + + PRM+P H+ P++
Sbjct: 585 LKS-QSNKASVHRAIRDGSKSLTMFQFSPRMVPRHLFPKV 623
>gi|410962305|ref|XP_003987713.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein
[Felis catus]
Length = 2051
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 179/325 (55%), Gaps = 36/325 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 338 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 393
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS-------------EYAWSHLKFI 101
DG+ + L ++ D L L+ +S + +SH K
Sbjct: 394 DGTKGMTRAKNELSRNEDFMKLYNHLECMFAHTRGTSASGSSIQKGDKDKNFVYSHPKLK 453
Query: 102 RLREILESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ 155
+L E++ HF+ +K T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 454 KLEEVVVEHFKSWNTQNASEKKCGETRVMIFSSFRDSVQEIAEMLLKHQPVIRVMTFVGH 513
Query: 156 SSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
+SG TQ+EQ E++K+FR+G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI+++
Sbjct: 514 ASGKSMKGFTQKEQLEVVKQFRSGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLI 573
Query: 211 QRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIP 270
QR+GRTGRKR GR V++L +GRE + S +S + I N+ + + + PRM+P
Sbjct: 574 QRMGRTGRKRQGRIVVILAEGREERTYNQSQCNKRSIYKAISGNRQVL-HFYQGSPRMVP 632
Query: 271 AHVTPRIKCLHIVVKDRVTPAKPSK 295
+ P + + I P KPS+
Sbjct: 633 DGINPELHKMFITCG-VYEPEKPSR 656
>gi|403277961|ref|XP_003930608.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Saimiri
boliviensis boliviensis]
Length = 2047
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 186/324 (57%), Gaps = 35/324 (10%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS------EYAWSHLKFIR 102
DG+ + L ++ D L + L+ N +S+ ++ + H K +
Sbjct: 391 DGTKGMTRSKNELSRNEDFMKLYKHLEGMFAHTRSTSANGISAIQQGDKKFVYGHPKLKK 450
Query: 103 LREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P ++ FVG +
Sbjct: 451 LEEVVIEHFKSWNAENTSGKKHDETRVMIFSSFRDSVQEIAEMLSQHQPTIRVMTFVGHA 510
Query: 157 SG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++VQ
Sbjct: 511 SGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQ 570
Query: 212 RLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPA 271
R+GRTGRKR GR V++L++GRE + S Q+ K + K I++ + + PRM+P
Sbjct: 571 RMGRTGRKRQGRIVVILSEGREERIYNQS-QSNKRNIYKAISSNRQVLHFNQRSPRMVPD 629
Query: 272 HVTPRIKCLHIVVKDRVTPAKPSK 295
+ P++ + + P KPS+
Sbjct: 630 GINPKLHKM-FITHGVYEPEKPSR 652
>gi|403277963|ref|XP_003930609.1| PREDICTED: Fanconi anemia group M protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 2021
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 186/324 (57%), Gaps = 35/324 (10%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 309 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 364
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS------EYAWSHLKFIR 102
DG+ + L ++ D L + L+ N +S+ ++ + H K +
Sbjct: 365 DGTKGMTRSKNELSRNEDFMKLYKHLEGMFAHTRSTSANGISAIQQGDKKFVYGHPKLKK 424
Query: 103 LREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P ++ FVG +
Sbjct: 425 LEEVVIEHFKSWNAENTSGKKHDETRVMIFSSFRDSVQEIAEMLSQHQPTIRVMTFVGHA 484
Query: 157 SG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++VQ
Sbjct: 485 SGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQ 544
Query: 212 RLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPA 271
R+GRTGRKR GR V++L++GRE + S Q+ K + K I++ + + PRM+P
Sbjct: 545 RMGRTGRKRQGRIVVILSEGREERIYNQS-QSNKRNIYKAISSNRQVLHFNQRSPRMVPD 603
Query: 272 HVTPRIKCLHIVVKDRVTPAKPSK 295
+ P++ + + P KPS+
Sbjct: 604 GINPKLHKM-FITHGVYEPEKPSR 626
>gi|302511351|ref|XP_003017627.1| hypothetical protein ARB_04509 [Arthroderma benhamiae CBS 112371]
gi|291181198|gb|EFE36982.1| hypothetical protein ARB_04509 [Arthroderma benhamiae CBS 112371]
Length = 1178
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 171/300 (57%), Gaps = 18/300 (6%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV--SKE 60
A+ K++ S A N L M+ F V SLA A+E L +G+ FY NLV
Sbjct: 597 ARKKWIMSPAGR-TANWGLKAMVNSIFTVLASLAHAIELLKYHGVGPFYRNLVSFRDGPT 655
Query: 61 DGSCPILGK-------DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRL 113
DGS GK D + ++++ L+ K+ +LK + L L++
Sbjct: 656 DGSQGKGGKYGRQIMDDANFKSMMTTLRSKMTDAEFIGHPKLEYLKRVILNHFLDADTNS 715
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIM 168
H T+V++F+++R EI VLK P++ +FVGQ+S G+ Q++Q EI+
Sbjct: 716 HTADSRKTRVMVFSHFRDSAEEIVRVLKKHAPIILPHVFVGQASAKGSEGMDQKKQLEII 775
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
KKF+ G +NT++ATS+GEEGLDIGE+DL+IC+D+ SPI+M+QR+GRTGRKR G+ V+LL
Sbjct: 776 KKFKEGTYNTIVATSIGEEGLDIGEVDLIICYDSSASPIRMLQRMGRTGRKRMGKVVLLL 835
Query: 229 TQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKD 286
+G+E + + + +++II + S + PR+IP + PR+ KC+ I +++
Sbjct: 836 MEGKEEEKYFRAKDNYEK-MQQIIASGSHFTFHEDKSPRIIPRDIQPRVDEKCIEIPIEN 894
>gi|440803280|gb|ELR24188.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 2476
Score = 181 bits (459), Expect = 5e-43, Method: Composition-based stats.
Identities = 107/270 (39%), Positives = 160/270 (59%), Gaps = 17/270 (6%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE-----DGSCPILGKDNDLQNLLQQ 79
+ F + +L A L TYG R+ N L ++ +E +G+ L N+ Q
Sbjct: 446 VHSQFALAITLYHAWGLLNTYGFRATKNYLSDLREEVQANKEGTAK---SKKALVNMPQF 502
Query: 80 LKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDV 139
L + + ++H K ++ E++ HF+ G T+V+IFA +R V EI ++
Sbjct: 503 HNLMLMLEEFADNAGFNHPKLQKVEELVLQHFQ--RSPGGNTRVMIFAQFRDTVEEICEL 560
Query: 140 LKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEI 194
L P P +K+ FVGQ S+G TQ+EQ ++++F+ G +NTL++T +GEEGLDIGE+
Sbjct: 561 LAPHAPHIKSMPFVGQGVGRSSAGFTQKEQSRVIEEFKKGGYNTLVSTCIGEEGLDIGEV 620
Query: 195 DLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINN 254
DL+ICFDAQ SP +MVQR+GRTGRKR+GRCV+L+T+G E F+ S QT KS KI+
Sbjct: 621 DLIICFDAQASPTRMVQRMGRTGRKRDGRCVVLVTEGAEEAVFKKSQQTSKSINMKIMKP 680
Query: 255 KSIYANLAKNGPRMIPAHVTPRIKCLHIVV 284
+S L K PRMIP + P++ H+ +
Sbjct: 681 ESF--ALYKECPRMIPVEIKPKVDERHMTI 708
>gi|91085743|ref|XP_973670.1| PREDICTED: similar to CG7922 CG7922-PA [Tribolium castaneum]
Length = 1401
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 163/277 (58%), Gaps = 20/277 (7%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE---DGSCPILGKDNDLQNLL---Q 78
I + ++ +L A E LV GLR+F N E G+ I+ +DLQ L
Sbjct: 306 IMKCLNICVTLYHAYETLVRCGLRAFLNFYKEHINNPLLQGNVSIIQIMDDLQAYLGPDP 365
Query: 79 QLKPKLDINI--MSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEI 136
+++P D + + + H KF +LR+IL +HF +T+VI+F YR E
Sbjct: 366 EVQPLPDGTFAEIPASIKFGHPKFYQLRDILVAHF---TNSDASTRVIVFFEYRESATEA 422
Query: 137 FDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDL 196
+ +L P++++ +FVGQ +GVTQ+EQ +K FR G NTL++T +GEEGLD+GE+DL
Sbjct: 423 YALLTRSFPLIRSRVFVGQRAGVTQKEQINTVKSFREGTCNTLLSTCIGEEGLDVGEVDL 482
Query: 197 VICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKI---- 251
++CFD A KSPI+M+QR+GRTGRK+ GR V+L+T+GRE Q +++ C Y +
Sbjct: 483 IVCFDIANKSPIRMIQRMGRTGRKKEGRVVVLVTEGRE----QQTLKDCLIYKNNLGSFA 538
Query: 252 INNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRV 288
N++ + + P+MIP++V P+ + + I VK V
Sbjct: 539 TNSQLLQEGKYTDNPKMIPSYVQPKCQKMCITVKKPV 575
>gi|320590134|gb|EFX02577.1| dead box helicase [Grosmannia clavigera kw1407]
Length = 1329
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 188/326 (57%), Gaps = 26/326 (7%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV--- 57
M A+ +++ A+ H+N+ M F V S+A A++ L +G++ F++++ E+
Sbjct: 433 MKARQEWMAGPAR--HLNQGTKYMTMAVFAVLQSVAHAIKLLNFHGIKPFHDSMAELRST 490
Query: 58 SKEDGSCPILGK----DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRL 113
+++D P K D D Q ++ ++ L + S H K L+E L +HF+
Sbjct: 491 TEKDEKGPKYRKQLVGDPDFQEMMLTVERWLQEDSFES-----HPKIGFLKERLNTHFQD 545
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIM 168
+ G T+ I+F+ YR EI L P +KA++FVGQ SSG+ Q++Q E +
Sbjct: 546 NL--GSNTRAIVFSEYRDSAEEIVRTLNRCSPNIKAAIFVGQADSKRSSGMKQKQQIEAI 603
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
+KF+AG FN L+ATS+GEEGLDIG++DL+IC+DA SPI+M+QR+GRTGRKR G ++LL
Sbjct: 604 EKFKAGAFNVLVATSIGEEGLDIGQVDLIICYDASSSPIRMLQRMGRTGRKRAGHVILLL 663
Query: 229 TQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKD 286
+G+E F T Q ++++K+I++ S + R++P V P + + + I V++
Sbjct: 664 MRGKEEEKF-TDAQNNYTHMQKLISDGSQFEFRFDMSERILPRDVKPEVERRFIDIPVEN 722
Query: 287 RVTPAKPSKKKPKENEKANKKSKKKL 312
+ P K K+N KK+ KK+
Sbjct: 723 TQDLSLPEPK--KKNAARTKKAPKKI 746
>gi|187957728|gb|AAI50786.1| Fanconi anemia, complementation group M [Mus musculus]
Length = 2021
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 173/311 (55%), Gaps = 33/311 (10%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 323 ILARDQFRKNPS--PNIVGIQQGIIEGEFALCISLYHGYELLQQMGMRSLYFFLSGIM-- 378
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS-----------EYAWSHLKFIRL 103
DG+ + L ++ D L L+ S ++ +SH K +L
Sbjct: 379 DGTKGMTRARNELSRNEDFMKLYTHLQSAFAPASTSDASAFQRGNKEKKFVYSHPKLKKL 438
Query: 104 REILESHFRLHAEKGET------TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS 157
E++ HF+ K T ++V+IF+++R V EI ++L P+++ FVG +S
Sbjct: 439 EEVILEHFKSWNAKATTEKKCHESRVMIFSSFRDSVEEIAEMLLQHRPVIRVMTFVGHAS 498
Query: 158 G-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
G TQ+EQ +++++FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI+++QR
Sbjct: 499 GKNTKGFTQKEQLQVVRQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLIQR 558
Query: 213 LGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAH 272
+GRTGRKR GR V++L +GRE + S K+ + I N+ + L + PRM+P
Sbjct: 559 MGRTGRKRQGRIVVILAEGREERTYNQSQSNKKNIYKAISGNRQVL-RLYQGSPRMVPDK 617
Query: 273 VTPRIKCLHIV 283
+ P + ++I
Sbjct: 618 INPELHKMYIT 628
>gi|54112418|ref|NP_849243.2| Fanconi anemia group M protein homolog [Mus musculus]
gi|78099255|sp|Q8BGE5.3|FANCM_MOUSE RecName: Full=Fanconi anemia group M protein homolog; Short=Protein
FACM; AltName: Full=ATP-dependent RNA helicase FANCM
Length = 2021
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 173/311 (55%), Gaps = 33/311 (10%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 323 ILARDQFRKNPS--PNIVGIQQGIIEGEFALCISLYHGYELLQQMGMRSLYFFLSGIM-- 378
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS-----------EYAWSHLKFIRL 103
DG+ + L ++ D L L+ S ++ +SH K +L
Sbjct: 379 DGTKGMTRARNELSRNEDFMKLYTHLQSAFAPASTSDASAFQRGNKEKKFVYSHPKLKKL 438
Query: 104 REILESHFRLHAEKGET------TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS 157
E++ HF+ K T ++V+IF+++R V EI ++L P+++ FVG +S
Sbjct: 439 EEVILEHFKSWNAKATTEKKCHESRVMIFSSFRDSVEEIAEMLLQHRPVIRVMTFVGHAS 498
Query: 158 G-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
G TQ+EQ +++++FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI+++QR
Sbjct: 499 GKNTKGFTQKEQLQVVRQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLIQR 558
Query: 213 LGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAH 272
+GRTGRKR GR V++L +GRE + S K+ + I N+ + L + PRM+P
Sbjct: 559 MGRTGRKRQGRIVVILAEGREERTYNQSQSNKKNIYKAISGNRQVL-RLYQGSPRMVPDK 617
Query: 273 VTPRIKCLHIV 283
+ P + ++I
Sbjct: 618 INPELHKMYIT 628
>gi|348572365|ref|XP_003471963.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein-like
[Cavia porcellus]
Length = 2029
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 174/307 (56%), Gaps = 29/307 (9%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PDIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL--DINIMSSE-----YAWSHLKFIRLREIL 107
DG+ + L ++ D L L+ D + + E +SH K +L E++
Sbjct: 391 DGTKGMTRAKNELCRNEDFVKLYHHLECMFAHDTSAVHREDKDKKIFYSHPKLKKLEEVV 450
Query: 108 ESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG--- 158
HF+ +K T+V+IF+++R V EI ++L +P+++ FVG +SG
Sbjct: 451 VEHFKSWNAQNTAEKKCSETRVMIFSSFRDSVQEIAEMLLKHKPIIRVMTFVGHASGKGM 510
Query: 159 --VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
TQ+EQ E++K+FRAG FNTL++T VGEEGLDIGE+DL++CFDAQKSPI+++QR+GRT
Sbjct: 511 KGFTQKEQLEVVKRFRAGGFNTLVSTCVGEEGLDIGEVDLIVCFDAQKSPIRLIQRMGRT 570
Query: 217 GRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPR 276
GR+R GR V++L +GRE + S Q+ K + K I+ + + PRM+P + P
Sbjct: 571 GRQRQGRIVVILAEGREERTYNQS-QSNKRSIYKAISGSKQVLHFYQRSPRMVPDGINPE 629
Query: 277 IKCLHIV 283
+ + I
Sbjct: 630 LHKMFIT 636
>gi|74197309|dbj|BAC34178.2| unnamed protein product [Mus musculus]
gi|74217148|dbj|BAC39257.2| unnamed protein product [Mus musculus]
Length = 1393
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 173/311 (55%), Gaps = 33/311 (10%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 323 ILARDQFRKNPS--PNIVGIQQGIIEGEFALCISLYHGYELLQQMGMRSLYFFLSGIM-- 378
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS-----------EYAWSHLKFIRL 103
DG+ + L ++ D L L+ S ++ +SH K +L
Sbjct: 379 DGTKGMTRARNELSRNEDFMKLYTHLQSAFAPASTSDASAFQRGNKEKKFVYSHPKLKKL 438
Query: 104 REILESHFRLHAEKGET------TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS 157
E++ HF+ K T ++V+IF+++R V EI ++L P+++ FVG +S
Sbjct: 439 EEVILEHFKSWNAKATTEKKCHESRVMIFSSFRDSVEEIAEMLLQHRPVIRVMTFVGHAS 498
Query: 158 G-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
G TQ+EQ +++++FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI+++QR
Sbjct: 499 GKNTKGFTQKEQLQVVRQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLIQR 558
Query: 213 LGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAH 272
+GRTGRKR GR V++L +GRE + S K+ + I N+ + L + PRM+P
Sbjct: 559 MGRTGRKRQGRIVVILAEGREERTYNQSQSNKKNIYKAISGNRQVL-RLYQGSPRMVPDK 617
Query: 273 VTPRIKCLHIV 283
+ P + ++I
Sbjct: 618 INPELHKMYIT 628
>gi|395838644|ref|XP_003792222.1| PREDICTED: Fanconi anemia group M protein isoform 2 [Otolemur
garnettii]
Length = 2019
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 173/314 (55%), Gaps = 36/314 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 308 ILARDQFRKNPS--PNIVGKQQGVIEGEFAICISLYHGYELLQQMGMRSLYYFLCGIM-- 363
Query: 61 DGSCPI------LGKDNDLQNLLQQLK--------------PKLDINIMSSEYAWSHLKF 100
DG+ + L ++ D L QL+ L ++ +SH K
Sbjct: 364 DGTKGMTRSKNELSRNEDFMELYNQLEGMFAHTSSPSAGGIAALQKGNTDKKFFYSHPKL 423
Query: 101 IRLREILESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +K + T+V+IF+++R V EI +L +P+++ FVG
Sbjct: 424 KKLEEVVVEHFKSWNAKNTSEKKCDETRVMIFSSFRDSVQEIAQMLLQHQPVIRVMTFVG 483
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++
Sbjct: 484 HASGKSTKGFTQKEQVEVVKRFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRL 543
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L +GRE + S Q K + K I+ + + PRM+
Sbjct: 544 VQRMGRTGRKRQGRIVVILAEGREERIYNQS-QFNKRRIYKAISGNRQVLHFYQRSPRMV 602
Query: 270 PAHVTPRIKCLHIV 283
P + P + + I
Sbjct: 603 PDGINPELHKMFIT 616
>gi|395838642|ref|XP_003792221.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Otolemur
garnettii]
Length = 2045
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 173/314 (55%), Gaps = 36/314 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 334 ILARDQFRKNPS--PNIVGKQQGVIEGEFAICISLYHGYELLQQMGMRSLYYFLCGIM-- 389
Query: 61 DGSCPI------LGKDNDLQNLLQQLK--------------PKLDINIMSSEYAWSHLKF 100
DG+ + L ++ D L QL+ L ++ +SH K
Sbjct: 390 DGTKGMTRSKNELSRNEDFMELYNQLEGMFAHTSSPSAGGIAALQKGNTDKKFFYSHPKL 449
Query: 101 IRLREILESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +K + T+V+IF+++R V EI +L +P+++ FVG
Sbjct: 450 KKLEEVVVEHFKSWNAKNTSEKKCDETRVMIFSSFRDSVQEIAQMLLQHQPVIRVMTFVG 509
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++
Sbjct: 510 HASGKSTKGFTQKEQVEVVKRFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRL 569
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L +GRE + S Q K + K I+ + + PRM+
Sbjct: 570 VQRMGRTGRKRQGRIVVILAEGREERIYNQS-QFNKRRIYKAISGNRQVLHFYQRSPRMV 628
Query: 270 PAHVTPRIKCLHIV 283
P + P + + I
Sbjct: 629 PDGINPELHKMFIT 642
>gi|148704700|gb|EDL36647.1| mCG118968 [Mus musculus]
Length = 1370
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 173/311 (55%), Gaps = 33/311 (10%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 291 ILARDQFRKNPS--PNIVGIQQGIIEGEFALCISLYHGYELLQQMGMRSLYFFLSGIM-- 346
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS-----------EYAWSHLKFIRL 103
DG+ + L ++ D L L+ S ++ +SH K +L
Sbjct: 347 DGTKGMTRARNELSRNEDFMKLYTHLQSAFAPASTSDASAFQRGNKEKKFVYSHPKLKKL 406
Query: 104 REILESHFRLHAEKGET------TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS 157
E++ HF+ K T ++V+IF+++R V EI ++L P+++ FVG +S
Sbjct: 407 EEVILEHFKSWNAKATTEKKCHESRVMIFSSFRDSVEEIAEMLLQHRPVIRVMTFVGHAS 466
Query: 158 G-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
G TQ+EQ +++++FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI+++QR
Sbjct: 467 GKNTKGFTQKEQLQVVRQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLIQR 526
Query: 213 LGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAH 272
+GRTGRKR GR V++L +GRE + S K+ + I N+ + L + PRM+P
Sbjct: 527 MGRTGRKRQGRIVVILAEGREERTYNQSQSNKKNIYKAISGNRQVL-RLYQGSPRMVPDK 585
Query: 273 VTPRIKCLHIV 283
+ P + ++I
Sbjct: 586 INPELHKMYIT 596
>gi|383865132|ref|XP_003708029.1| PREDICTED: uncharacterized protein LOC100883120 [Megachile
rotundata]
Length = 1227
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 191/347 (55%), Gaps = 22/347 (6%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLL----QQL 80
I + ++ ++ A E ++ GLR+FY + + L + LQ LL Q L
Sbjct: 296 IIKTLNILITMYHAYELMIRDGLRAFY----KFYQTHSDKFWLKDEIQLQELLIDVEQYL 351
Query: 81 KP--------KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVV 132
P + D +S + + H KF +L+E+L HF EK + T+ I+F YR +
Sbjct: 352 GPFPEIKTFHEDDAITISQDLVYGHTKFEKLKELLLHHFENRQEKQDDTRAIVFVEYRDI 411
Query: 133 VAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIG 192
V+EI+ +L +P+++ MFVGQ+ +Q+ K ++ FR N L++TS+GEEGLD+G
Sbjct: 412 VSEIYVLLLQCQPLIRPQMFVGQAGQKQKQQLKA-LEDFRNNRVNVLVSTSIGEEGLDVG 470
Query: 193 EIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKI 251
E+DL+ICFD +Q SP ++VQR+GRTGRKR+G +IL+T G+E +++M S KI
Sbjct: 471 EVDLIICFDVSQHSPTRLVQRMGRTGRKRDGHIIILVTDGKEHETLKSTMARRASLNNKI 530
Query: 252 INNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKK 311
+N +I+++L +N PRM+P P ++I + +V+ K + KK ++ K
Sbjct: 531 LNTGNIFSSLYQNNPRMVPDTYNPDCMKMYISTQPKVSVTKGNDKKSRKTNKEKVNYVYV 590
Query: 312 LETDGNSEPAGKQNKTNAKK--TKKQPMMTQSNDIRTCFENITKKKK 356
L+ D S+ +NK + K KQP N+I TC + + KK
Sbjct: 591 LDPDALSQ--DNENKFSMTKFFKTKQPKEQVKNNISTCVLDTSHTKK 635
>gi|195481394|ref|XP_002086716.1| GE11154 [Drosophila yakuba]
gi|194186506|gb|EDX00118.1| GE11154 [Drosophila yakuba]
Length = 1371
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 174/311 (55%), Gaps = 35/311 (11%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCP-ILGKDNDLQNLLQQLKP 82
+I +F + S+ +LE + +GLR F NN + EDG +L KD+DL+NL++Q++
Sbjct: 206 IIMGNFAMCISMYHSLELMERHGLRVFVNNFD--AAEDGREKFVLAKDSDLRNLVEQVRQ 263
Query: 83 KLDINIMS---------------SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
+L N + S+ + H K+ +LRE+L HF+ +A+ ++ I+F
Sbjct: 264 ELGANPLDYTTHAMTNGEVPPLPSDLDFGHAKYEKLREVLVQHFQANAD----SRAIVFC 319
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQSSGV------TQQEQKEIMKKFRAGEFNTLIA 181
YR V I +L P+++ FVGQ S V TQ++Q +IM FR+G N L+A
Sbjct: 320 EYRESVMLIHRLLLQHRPVLRPRCFVGQGSTVGASYALTQKQQLQIMSDFRSGTSNVLVA 379
Query: 182 TSVGEEGLDIGEIDLVICFDAQKS-PIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
TS+GEEG+D+GE+++++CFD S P + VQR+GRTGRK+NG V+L+T+GRE +
Sbjct: 380 TSIGEEGIDVGEVEMIVCFDISSSNPTRFVQRIGRTGRKKNGEVVMLVTEGREQQVLKEV 439
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKE 300
+ +K++N+ + +L + PRM+P+ P+ + H+ PA K PK
Sbjct: 440 LANKDQINKKLLNSSVVKLSLYEQNPRMVPSQFQPKCEEKHM------EPAVEEKPMPKS 493
Query: 301 NEKANKKSKKK 311
K + K+K
Sbjct: 494 LAKMKELKKRK 504
>gi|195498547|ref|XP_002096570.1| GE25739 [Drosophila yakuba]
gi|194182671|gb|EDW96282.1| GE25739 [Drosophila yakuba]
Length = 1495
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 174/311 (55%), Gaps = 35/311 (11%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCP-ILGKDNDLQNLLQQLKP 82
+I +F + S+ +LE + +GLR F NN + EDG +L KD+DL+NL++Q++
Sbjct: 330 IIMGNFAMCISMYHSLELMERHGLRVFVNNFD--AAEDGREKFVLAKDSDLRNLVEQVRQ 387
Query: 83 KLDINIMS---------------SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
+L N + S+ + H K+ +LRE+L HF+ +A+ ++ I+F
Sbjct: 388 ELGANPLDYTTHAMTNGEVPPLPSDLDFGHAKYEKLREVLVQHFQANAD----SRAIVFC 443
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQSSGV------TQQEQKEIMKKFRAGEFNTLIA 181
YR V I +L P+++ FVGQ S V TQ++Q +IM FR+G N L+A
Sbjct: 444 EYRESVMLIHRLLLQHRPVLRPRCFVGQGSTVGASYALTQKQQLQIMSDFRSGTSNVLVA 503
Query: 182 TSVGEEGLDIGEIDLVICFDAQKS-PIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
TS+GEEG+D+GE+++++CFD S P + VQR+GRTGRK+NG V+L+T+GRE +
Sbjct: 504 TSIGEEGIDVGEVEMIVCFDISSSNPTRFVQRIGRTGRKKNGEVVMLVTEGREQQVLKEV 563
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKE 300
+ +K++N+ + +L + PRM+P+ P+ + H+ PA K PK
Sbjct: 564 LANKDQINKKLLNSSVVKLSLYEQNPRMVPSQFQPKCEEKHM------EPAVEEKPMPKS 617
Query: 301 NEKANKKSKKK 311
K + K+K
Sbjct: 618 LAKMKELKKRK 628
>gi|440481037|gb|ELQ61664.1| helicase C-terminal domain protein [Magnaporthe oryzae P131]
Length = 1102
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/357 (35%), Positives = 193/357 (54%), Gaps = 38/357 (10%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKED- 61
A+ ++K +F N+ L M+ F + SLA A++ L +G+R FY+NLV E
Sbjct: 386 ARQDWMKGPGRF--ANQGLKMMLMAIFTILQSLAHAIKLLNYHGIRPFYDNLVAFRSETE 443
Query: 62 -----GS---CPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRL 113
GS ++G+ + Q ++ L I+ + H K L + L +HF +
Sbjct: 444 DKGQKGSKYKRQLIGEQS-FQEMMDLASKWLKIDGFAG-----HPKLTHLCDNLLNHF-M 496
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIM 168
A +G +T+VI+F+ YR EI VL +PM+ AS+FVGQ S G+ Q++Q E +
Sbjct: 497 DAGEGSSTRVIVFSEYRDSAEEITRVLNVHKPMISASLFVGQADSKKSEGMKQKQQIETI 556
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
KFR G FN L+ATS+GEEGLDIG++DL+IC+DA SPI+M+QR+GRTGRKR G+ +LL
Sbjct: 557 AKFRDGIFNVLVATSIGEEGLDIGQVDLIICYDASSSPIRMLQRMGRTGRKRAGKITLLL 616
Query: 229 TQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKD 286
+G+E N+ + Q ++K+I S + R++P V P + + + I +++
Sbjct: 617 MKGKEEDNYAKA-QDNYEKMQKLICEGSRFNFRHDLSSRIVPRDVKPEVDKRMVEIPIEN 675
Query: 287 RVTPAKPSKKKPKENEKANKKSKKK-------LETDGNSEPAGKQNKTNAKKTKKQP 336
+ P +PK KK+ KK +ET NS +A KTK +P
Sbjct: 676 TQDTSLP---EPKARSTRGKKASKKKFNMPDGVETGFNS--VASMLGISASKTKAKP 727
>gi|26343661|dbj|BAC35487.1| unnamed protein product [Mus musculus]
Length = 651
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 173/310 (55%), Gaps = 33/310 (10%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 323 ILARDQFRKNPS--PNIVGIQQGIIEGEFALCISLYHGYELLQQMGMRSLYFFLSGIM-- 378
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS-----------EYAWSHLKFIRL 103
DG+ + L ++ D L L+ S ++ +SH K +L
Sbjct: 379 DGTKGMTRARNELSRNEDFMKLYTHLQSAFAPASTSDASAFQRGNKEKKFVYSHPKLKKL 438
Query: 104 REILESHFRLHAEKGET------TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS 157
E++ HF+ K T ++V+IF+++R V EI ++L P+++ FVG +S
Sbjct: 439 EEVILEHFKSWNAKATTEKKCHESRVMIFSSFRDSVEEIAEMLLQHRPVIRVMTFVGHAS 498
Query: 158 G-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
G TQ+EQ +++++FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI+++QR
Sbjct: 499 GKNTKGFTQKEQLQVVRQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLIQR 558
Query: 213 LGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAH 272
+GRTGRKR GR V++L +GRE + S K+ + I N+ + L + PRM+P
Sbjct: 559 MGRTGRKRQGRIVVILAEGREERTYNQSQSNKKNIYKAISGNRQVL-RLYQGSPRMVPDK 617
Query: 273 VTPRIKCLHI 282
+ P + ++I
Sbjct: 618 INPELHKMYI 627
>gi|390177791|ref|XP_002137335.2| GA27149 [Drosophila pseudoobscura pseudoobscura]
gi|388859198|gb|EDY67893.2| GA27149 [Drosophila pseudoobscura pseudoobscura]
Length = 1394
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 171/310 (55%), Gaps = 34/310 (10%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPK 83
+I +F V SL +LE + +GLR F NN + +E +L +D DL+NL+ Q++
Sbjct: 329 IIAGNFAVCISLYHSLELMERHGLRVFVNNF-DADEEGREKFVLARDGDLRNLVDQVRLN 387
Query: 84 LDIN---------------IMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFAN 128
L N M ++ + H K+ +LR +L HF +AE ++ I+F
Sbjct: 388 LGANPLDFTTHTMTNGEVPAMPADLDFGHAKYEKLRLVLLEHFASNAE----SRAIVFCE 443
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIAT 182
YR V I +L P+++A FVGQ S +TQ++Q +IM FR+G N L+AT
Sbjct: 444 YRESVMLIHRLLLQHRPLLRARCFVGQGSTAGASYALTQKQQIQIMADFRSGTSNVLVAT 503
Query: 183 SVGEEGLDIGEIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
S+GEEG+D+GE+++++CFD +P + VQR+GRTGRK+NG V+L+T+GRE + +
Sbjct: 504 SIGEEGIDVGEVEMIVCFDICSSNPTRFVQRIGRTGRKKNGEVVMLVTEGREHQVLKDVL 563
Query: 242 QTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKEN 301
+K++N+ + +L N PRM+P+ P KC ++++ A ++KPK
Sbjct: 564 ANKDQTNKKLLNSSVVRMSLYANNPRMVPSQFQP--KC-----EEKLMEAAAVEEKPKAK 616
Query: 302 EKANKKSKKK 311
A + KK
Sbjct: 617 PSAKAREPKK 626
>gi|327297022|ref|XP_003233205.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326464511|gb|EGD89964.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1181
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 164/289 (56%), Gaps = 16/289 (5%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV--SKE 60
A+ K++ S A N L M+ F V SLA A+E L +G+ FY NLV
Sbjct: 595 ARKKWIMSPAGR-TANWGLKGMVNSIFTVLASLAHAIELLKYHGVGPFYRNLVSFRDGST 653
Query: 61 DGSCPILGK-------DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRL 113
DGS GK D + ++++ L+ K+ +LK + L L++
Sbjct: 654 DGSQGKGGKYGRQVMDDANFKSMMTMLRSKMTDADFVGHPKLEYLKRVILNHFLDADTNS 713
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIM 168
H T+V++F+++R EI VLK P++ +FVGQ+S G+ Q++Q EI+
Sbjct: 714 HTANSPKTRVMVFSHFRDSAEEIVRVLKKHAPIILPHVFVGQASAKGSEGMDQKKQLEII 773
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
KKF+ G +NT++ATS+GEEGLDIGE+DL+IC+D+ SPI+M+QR+GRTGRKR G+ V+LL
Sbjct: 774 KKFKEGTYNTIVATSIGEEGLDIGEVDLIICYDSSASPIRMLQRMGRTGRKRTGKVVLLL 833
Query: 229 TQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
+G+E + + + +++II + S + PR+IP + PR+
Sbjct: 834 MEGKEEEKYFRAKDNYEK-MQQIIASGSHFTFHEDKSPRIIPRDIQPRV 881
>gi|351710100|gb|EHB13019.1| Fanconi anemia group M protein [Heterocephalus glaber]
Length = 1664
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 166/294 (56%), Gaps = 38/294 (12%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F V SL E L G+RS Y L +
Sbjct: 348 ILARDQFRKNPS--PNIVGIQQGIIEGEFAVCISLYHGYELLQQMGMRSLYFFLCGIM-- 403
Query: 61 DGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLH------ 114
DG+ D D + +SH K +L E++ HF+
Sbjct: 404 DGT----KGDKD------------------KTFCYSHPKLKKLEEVVVEHFKSWNAQNSS 441
Query: 115 AEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMK 169
+K + T+V+IF+++R V EI ++L +P+++ FVG +S G TQ+EQ E++K
Sbjct: 442 GKKCDETRVMIFSSFRDSVQEIAEMLLKHKPIIRVMTFVGHASGKSMKGFTQKEQLEVVK 501
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
+FR G +NTL++T VGEEGLDIGE+DL+ICFDAQ+SPI+++QR+GRTGRKR GR V++L
Sbjct: 502 QFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQRSPIRLIQRMGRTGRKRQGRIVVILA 561
Query: 230 QGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIV 283
+GRE + S Q+ K + K I+ + + PRM+P + P + + I
Sbjct: 562 EGREERTYNQS-QSNKRSIYKAISGSKQVLHFYQRSPRMVPDDINPELHKMFIT 614
>gi|195145936|ref|XP_002013946.1| GL23119 [Drosophila persimilis]
gi|194102889|gb|EDW24932.1| GL23119 [Drosophila persimilis]
Length = 1395
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 215/414 (51%), Gaps = 55/414 (13%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPK 83
+I +F V SL +LE + +GLR F NN + +E +L +D DL+NL+ Q++
Sbjct: 329 IIAGNFSVCISLYHSLELMERHGLRVFVNNF-DADEEGREKFVLARDGDLRNLVDQVRLN 387
Query: 84 LDIN---------------IMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFAN 128
L N M ++ + H K+ +LR +L HF +AE ++ I+F
Sbjct: 388 LGANPLDFTTHTMTNGEVPAMPADLDFGHAKYEKLRLVLLEHFASNAE----SRAIVFCE 443
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIAT 182
YR V I +L P+++A FVGQ S +TQ++Q +IM FR+G N L+AT
Sbjct: 444 YRESVMLIHRLLLQHRPLLRARCFVGQGSTAGASYALTQKQQIQIMADFRSGTSNVLVAT 503
Query: 183 SVGEEGLDIGEIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
S+GEEG+D+GE+++++CFD +P + VQR+GRTGRK+NG V+L+T+GRE + +
Sbjct: 504 SIGEEGIDVGEVEMIVCFDICSSNPTRFVQRIGRTGRKKNGEVVMLVTEGREHQVLKDVL 563
Query: 242 QTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHI---VVKDRVTPAKPS--KK 296
+K++N+ + +L N PRM+P+ P+ + H+ ++D+ KPS K
Sbjct: 564 ANKDQTNKKLLNSSVVRMSLYANNPRMVPSQFQPKCEEKHMEAAAIEDK-PKLKPSAKAK 622
Query: 297 KPKENEKAN-------KKSKKKLETDG---------NSEPAGK----QNKTNAKKTKKQP 336
+PK+ ++ N K+S E+ G SE + + Q N+ K
Sbjct: 623 EPKKRKETNVTLHKFYKQSSHPSESQGILQGLQPYQMSEASQQMIQDQATRNSVNVKNFL 682
Query: 337 MMTQSNDIRTCFENITKKKKTFIDFLTQSSGEPVSAMDDEVVIVQNKIKPMQRK 390
+ TQ+ + E I + +K + + QS+ ++A D + +Q+K P Q K
Sbjct: 683 LDTQATKLSNSQEEIQRLRK--LTRILQSNKPIITASQDLISHLQDKELPRQLK 734
>gi|326483398|gb|EGE07408.1| helicase domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 1176
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 164/289 (56%), Gaps = 16/289 (5%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV--SKE 60
A+ K++ S A N L M+ F V SLA A+E L +G+ FY NLV
Sbjct: 594 ARKKWIMSPAGR-TANWGLKGMVNSIFTVLASLAHAIELLKYHGVGPFYRNLVSFRDGPT 652
Query: 61 DGSCPILGK-------DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRL 113
DGS GK D + ++++ L+ K+ +LK + L L++
Sbjct: 653 DGSQGKGGKYGRQIMDDANFKSMMTMLRSKMTDADFIGHPKLEYLKRVILNHFLDADTNS 712
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIM 168
H T+V++F+++R EI VLK P++ +FVGQ+S G+ Q++Q EI+
Sbjct: 713 HTTDSPKTRVMVFSHFRDSAEEIVRVLKKHSPIILPHVFVGQASAKGSEGMDQKKQLEII 772
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
KKF+ G +NT++ATS+GEEGLDIGE+DL+IC+D+ SPI+M+QR+GRTGRKR G+ V+LL
Sbjct: 773 KKFKEGTYNTIVATSIGEEGLDIGEVDLIICYDSSASPIRMLQRMGRTGRKRMGKVVLLL 832
Query: 229 TQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
+G+E + + + +++II + S + PR+IP + PR+
Sbjct: 833 MEGKEEEKYFKAKDNYEK-MQQIIASGSHFTFHEDKSPRIIPRDIQPRV 880
>gi|326476158|gb|EGE00168.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1176
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 164/289 (56%), Gaps = 16/289 (5%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV--SKE 60
A+ K++ S A N L M+ F V SLA A+E L +G+ FY NLV
Sbjct: 594 ARKKWIMSPAGR-TANWGLKGMVNSIFTVLASLAHAIELLKYHGVGPFYRNLVSFRDGPT 652
Query: 61 DGSCPILGK-------DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRL 113
DGS GK D + ++++ L+ K+ +LK + L L++
Sbjct: 653 DGSQGKGGKYGRQIMDDANFKSMMTMLRSKMTDADFIGHPKLEYLKRVILNHFLDADTNS 712
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIM 168
H T+V++F+++R EI VLK P++ +FVGQ+S G+ Q++Q EI+
Sbjct: 713 HTTDSPKTRVMVFSHFRDSAEEIVRVLKKHSPIILPHVFVGQASAKGSEGMDQKKQLEII 772
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
KKF+ G +NT++ATS+GEEGLDIGE+DL+IC+D+ SPI+M+QR+GRTGRKR G+ V+LL
Sbjct: 773 KKFKEGTYNTIVATSIGEEGLDIGEVDLIICYDSSASPIRMLQRMGRTGRKRMGKVVLLL 832
Query: 229 TQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
+G+E + + + +++II + S + PR+IP + PR+
Sbjct: 833 MEGKEEEKYFRAKDNYEK-MQQIIASGSHFTFHEDKSPRIIPRDIQPRV 880
>gi|302661145|ref|XP_003022243.1| hypothetical protein TRV_03646 [Trichophyton verrucosum HKI 0517]
gi|291186180|gb|EFE41625.1| hypothetical protein TRV_03646 [Trichophyton verrucosum HKI 0517]
Length = 1177
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 164/289 (56%), Gaps = 16/289 (5%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV--SKE 60
A+ K++ S A N L M+ F V SLA A+E L +G+ FY NLV
Sbjct: 596 ARKKWIMSPAGR-TANWGLKGMVNSIFTVLASLAHAIELLKYHGVGPFYRNLVSFRDGPT 654
Query: 61 DGSCPILGK-------DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRL 113
DGS GK D + ++++ L+ K+ +LK + L L++
Sbjct: 655 DGSQGKGGKYGRQIMDDANFKSMMTTLRSKMTDADFIGHPKLEYLKRVILNHFLDADTNS 714
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIM 168
H T+V++F+++R EI VLK P++ +FVGQ+S G+ Q++Q EI+
Sbjct: 715 HTADSPKTRVMVFSHFRDSAEEIVRVLKKHAPIILPHVFVGQASAKGSEGMDQKKQLEII 774
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
KKF+ G +NT++ATS+GEEGLDIGE+DL+IC+D+ SPI+M+QR+GRTGRKR G+ V+LL
Sbjct: 775 KKFKEGTYNTIVATSIGEEGLDIGEVDLIICYDSSASPIRMLQRMGRTGRKRMGKVVLLL 834
Query: 229 TQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
+G+E + + + +++II + S + PR+IP + PR+
Sbjct: 835 MEGKEEEKYFRAKDDYEK-MQQIIASGSHFTFHEDKSPRIIPRDIQPRV 882
>gi|389631741|ref|XP_003713523.1| ATP-dependent DNA helicase MPH1 [Magnaporthe oryzae 70-15]
gi|189082434|sp|A4RN08.1|MPH1_MAGO7 RecName: Full=ATP-dependent DNA helicase MPH1
gi|351645856|gb|EHA53716.1| ATP-dependent DNA helicase MPH1 [Magnaporthe oryzae 70-15]
Length = 1102
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/357 (34%), Positives = 193/357 (54%), Gaps = 38/357 (10%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKED- 61
A+ ++K +F N+ L M+ F + SLA A++ L +G+R FY+NLV E
Sbjct: 386 ARQDWMKGPGRF--ANQGLKMMLMAIFTILQSLAHAIKLLNYHGIRPFYDNLVAFRSETE 443
Query: 62 -----GS---CPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRL 113
GS ++G+ + Q ++ L I+ + H K L + L ++F +
Sbjct: 444 DKGQKGSKYKRQLIGEQS-FQEMMDLASKWLKIDGFAG-----HPKLTHLCDNLLNYF-M 496
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIM 168
A +G +T+VI+F+ YR EI VL +PM+ AS+FVGQ S G+ Q++Q E +
Sbjct: 497 DAGEGSSTRVIVFSEYRDSAEEITRVLNVHKPMISASLFVGQADSKKSEGMKQKQQIETI 556
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
KFR G FN L+ATS+GEEGLDIG++DL+IC+DA SPI+M+QR+GRTGRKR G+ +LL
Sbjct: 557 AKFRDGIFNVLVATSIGEEGLDIGQVDLIICYDASSSPIRMLQRMGRTGRKRAGKITLLL 616
Query: 229 TQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKD 286
+G+E N+ + Q ++K+I S + R++P V P + + + I +++
Sbjct: 617 MKGKEEDNYAKA-QDNYEKMQKLICEGSRFNFRHDLSSRIVPRDVKPEVDKRMVEIPIEN 675
Query: 287 RVTPAKPSKKKPKENEKANKKSKKK-------LETDGNSEPAGKQNKTNAKKTKKQP 336
+ P +PK KK+ KK +ET NS +A KTK +P
Sbjct: 676 TQDTSLP---EPKARSTRGKKASKKKFNMPDGVETGFNS--VASMLGISASKTKAKP 727
>gi|402218846|gb|EJT98921.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 1094
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 169/308 (54%), Gaps = 30/308 (9%)
Query: 33 HSLASALENLVTYGLRSFYNNLVEVS------KEDGSCPILGKDNDLQNLLQQLKPKLDI 86
H L A+ L + YN L++ + KE G+ L D ++L+ +++ +
Sbjct: 367 HKLTFAMAYLCEESVEMAYNTLLDAAGKKLTTKEGGNK--LSNDPKFRDLITEIENYRNE 424
Query: 87 NIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM 146
+ H K +L + HF + ++T+V++F YR V EI LK +P+
Sbjct: 425 RVTGGGPV-GHPKMDKLVAVALEHFAAPDDGADSTRVMVFCQYRDCVDEIVKSLKLQQPI 483
Query: 147 VKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICF 200
++AS FVGQSS G+ Q++Q EI+++F+ G+FN L+ATS+GEEGLDIGE+DL+IC+
Sbjct: 484 IRASKFVGQSSDKRGDRGMAQKDQIEIIRRFKQGDFNVLVATSIGEEGLDIGEVDLIICY 543
Query: 201 DAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYAN 260
D QKS IKM+QR+GRTGRKR+G+ V+L+ +GRE N+ + + + E II +
Sbjct: 544 DVQKSSIKMLQRIGRTGRKRSGKIVVLMAEGREETNWDAANENYSNVQETIIRGDQL--E 601
Query: 261 LAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKKLETDGNSEP 320
L + R+IP P ++ H+ + V+ + K++L TDGN P
Sbjct: 602 LFDDDERLIPDDAKPIVRKQHMEIHPFVS-------------QDTGGKKRRLVTDGNKGP 648
Query: 321 AGKQNKTN 328
A ++ + +
Sbjct: 649 AKRRKRND 656
>gi|315044265|ref|XP_003171508.1| helicase domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311343851|gb|EFR03054.1| helicase domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1184
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 156/271 (57%), Gaps = 15/271 (5%)
Query: 21 LDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV--SKEDGSCPILGK-------DN 71
L M+ F V SLA A E L +G+ FY NLV DGS GK D
Sbjct: 617 LKGMVNSIFTVLASLAHATELLKYHGVGPFYRNLVSFRDGPTDGSQGKGGKYGKQIMDDM 676
Query: 72 DLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRV 131
+ ++++ L+ K+ +LK + L L++ H T+V++F+++R
Sbjct: 677 NFKSMMTTLRSKMTDEDFIGHPKLEYLKRVILNHFLDADTNSHGADSPKTRVMVFSHFRD 736
Query: 132 VVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGE 186
EI VLK P++ +FVGQ+S G+ Q++Q EI+KKF+ G +NT++ATS+GE
Sbjct: 737 SAEEIVRVLKKHAPIILPHVFVGQASAKGSEGMDQKKQLEIIKKFKEGTYNTIVATSIGE 796
Query: 187 EGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKS 246
EGLDIGE+DL+IC+D+ SPI+M+QR+GRTGRKR G+ V+LL +G+E + + +
Sbjct: 797 EGLDIGEVDLIICYDSSASPIRMLQRMGRTGRKRMGKVVLLLMEGKEEEKYFRAKDNYEK 856
Query: 247 YVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
+++II + S +A PR+IP + PR+
Sbjct: 857 -MQQIIASGSHFAFHEDRSPRIIPRDIQPRV 886
>gi|109083473|ref|XP_001096802.1| PREDICTED: Fanconi anemia group M protein isoform 2 [Macaca
mulatta]
Length = 2050
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 182/326 (55%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGVIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS--------------EYAWSHLKF 100
DG+ + LG++ D L L+ +S ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNHLECMFAHTRSTSADSVSAIQQGDKNKKFVYSHPKL 450
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 451 KKLEEVVIEHFKSWNAENTSEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 510
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K R G N+L+ T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 511 HASGKSTKGFTQKEQLEVIKLARDGGSNSLVYTCVGEEGLDIGEVDLIICFDSQKSPIRL 570
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L++GRE + S ++ + I +N+ + + + PRM+
Sbjct: 571 VQRMGRTGRKRQGRIVVILSEGREERIYNQSQSNKRNICKAISSNRQVL-HFYQRSPRMV 629
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + + P KPS+
Sbjct: 630 PDGINPKLHKM-FITHGVYEPEKPSR 654
>gi|156358317|ref|XP_001624467.1| predicted protein [Nematostella vectensis]
gi|156211250|gb|EDO32367.1| predicted protein [Nematostella vectensis]
Length = 642
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 179/314 (57%), Gaps = 33/314 (10%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDG 62
++++ K A+ ++NR I+ DF + SL A E L +G+ SFYN + + +G
Sbjct: 331 CREQFRKGPAE--NMNRAQVGSIEGDFAMGISLYHAYELLHQHGILSFYNFIKGIL--EG 386
Query: 63 SCPILGKDNDLQN----------LLQQLKP---KLDINIMSSEYAW-SHLKFIRLREILE 108
S + +L L Q + + +S+ + SH K +L EI+
Sbjct: 387 SKGMTRAKTELMRHQVTIYYTSALFSQFSSPSRRRSMQFQASDPRFKSHPKLQKLEEIVV 446
Query: 109 SHFRLHAE-----KGE---TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS--- 157
HF+ AE KG+ T+V+IF+ YR V EI +L +P+V+ F+GQ+S
Sbjct: 447 EHFKKFAESTSKVKGKPSVDTRVMIFSQYRDSVKEITTILCRHKPLVRVMSFIGQASTGK 506
Query: 158 ---GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLG 214
G++Q+EQ E++ +FR G +NTL++T VGEEGLDIG++DL++CFDA SPI++VQR+G
Sbjct: 507 SSKGLSQKEQLEVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFDAHASPIRLVQRMG 566
Query: 215 RTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVT 274
RTGRKR+GR V+L+ +G+E ++ S KS + I+ + +L ++ PRMIP H+T
Sbjct: 567 RTGRKRDGRIVVLVAEGKEEQVYKRSQSNKKSIHKAIVKGTGSF-DLYQDNPRMIPKHLT 625
Query: 275 PRIKCLHIVVKDRV 288
P + + + V V
Sbjct: 626 PTVFKMEMTVGSYV 639
>gi|355778552|gb|EHH63588.1| hypothetical protein EGM_16587 [Macaca fascicularis]
Length = 2052
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 183/328 (55%), Gaps = 39/328 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGVIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS---------------EYAWSHLK 99
DG+ + LG++ D L L+ +S ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNHLECMFAHTRSTSADSVSAIQQAGDKNKKFVYSHPK 450
Query: 100 FIRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFV 153
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FV
Sbjct: 451 LKKLEEVVIEHFKSWNAENTSEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFV 510
Query: 154 GQSSG-----VTQQEQKEIMKKFR-AGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
G +SG TQ+EQ E+ F+ G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI
Sbjct: 511 GHASGKSTKGFTQKEQLEVKSYFKNGGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPI 570
Query: 208 KMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPR 267
++VQR+GRTGRKR GR V++L++GRE + S ++ + I +N+ + + + PR
Sbjct: 571 RLVQRMGRTGRKRQGRIVVILSEGREERIYNQSQSNKRNICKAISSNRQVL-HFYQRSPR 629
Query: 268 MIPAHVTPRIKCLHIVVKDRVTPAKPSK 295
M+P + P++ + + P KPS+
Sbjct: 630 MVPDGINPKLHKM-FITHGVYEPEKPSR 656
>gi|297297766|ref|XP_001096470.2| PREDICTED: Fanconi anemia group M protein isoform 1 [Macaca
mulatta]
Length = 2024
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 182/326 (55%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 309 ILARDQFRKNPS--PNIVGIQQGVIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 364
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS--------------EYAWSHLKF 100
DG+ + LG++ D L L+ +S ++ +SH K
Sbjct: 365 DGTKGMTRSKNELGRNEDFMKLYNHLECMFAHTRSTSADSVSAIQQGDKNKKFVYSHPKL 424
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 425 KKLEEVVIEHFKSWNAENTSEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 484
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K R G N+L+ T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 485 HASGKSTKGFTQKEQLEVIKLARDGGSNSLVYTCVGEEGLDIGEVDLIICFDSQKSPIRL 544
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
VQR+GRTGRKR GR V++L++GRE + S ++ + I +N+ + + + PRM+
Sbjct: 545 VQRMGRTGRKRQGRIVVILSEGREERIYNQSQSNKRNICKAISSNRQVL-HFYQRSPRMV 603
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P + P++ + + P KPS+
Sbjct: 604 PDGINPKLHKM-FITHGVYEPEKPSR 628
>gi|195569151|ref|XP_002102574.1| GD19428 [Drosophila simulans]
gi|194198501|gb|EDX12077.1| GD19428 [Drosophila simulans]
Length = 1487
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 174/311 (55%), Gaps = 35/311 (11%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCP-ILGKDNDLQNLLQQLKP 82
+I +F + S+ +LE + +GLR F NN + EDG +L +D +L+NL++Q++
Sbjct: 326 IIMSNFAMCISMYHSLELMERHGLRVFVNNFD--ADEDGREKFVLARDGNLRNLVEQVRQ 383
Query: 83 KLDINIMS---------------SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
+L N + S+ + H K+ +LR++L HF+ + + ++ I+F
Sbjct: 384 ELGANPLDYTTHAMTNGEVPPLPSDLDFGHAKYEKLRQVLVQHFQANPD----SRAIVFC 439
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQSSGV------TQQEQKEIMKKFRAGEFNTLIA 181
YR V I +L P+++ FVGQ S V TQ++Q +IM FR+G N L+A
Sbjct: 440 EYRESVMLIHRLLLQHRPVLRPRCFVGQGSTVGASYALTQKQQLQIMTDFRSGTSNVLVA 499
Query: 182 TSVGEEGLDIGEIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
TS+GEEGLD+GE+++++CFD +P + +QR+GRTGRK+NG V+L+T+GRE +
Sbjct: 500 TSIGEEGLDVGEVEMIVCFDICSTNPTRFIQRIGRTGRKKNGEVVMLVTEGREQQVLKDV 559
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKE 300
+ +K++N+ + +L + PRM+P+ P KC V+ + P + KPK
Sbjct: 560 LANKDQINKKLLNSSVVKFSLYEQNPRMVPSKFQP--KC----VEKHMEPVAEDEPKPKS 613
Query: 301 NEKANKKSKKK 311
+ K + K+K
Sbjct: 614 SAKTKESRKRK 624
>gi|449299067|gb|EMC95081.1| hypothetical protein BAUCODRAFT_72607, partial [Baudoinia
compniacensis UAMH 10762]
Length = 774
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 171/307 (55%), Gaps = 35/307 (11%)
Query: 21 LDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQL 80
L MI F + LA + L +G+ FY ++E K S GK N + +
Sbjct: 371 LKGMINIIFTLLSQLAHGIGLLKYHGIVPFYTGMLEFQKAVDSGQSKGK-----NAREIV 425
Query: 81 KPKLDINIMSSEYAWSH-------LKFIRLREILESHFRLHAEKG--------ETTKVII 125
+ I +MS W+H K LRE++ HF L A +G T+V++
Sbjct: 426 QSSDFIQMMSRIRGWTHNPDFVGHPKLQYLREVVLGHF-LDAGEGALGTDAPPSATRVMV 484
Query: 126 FANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLI 180
FA++R EI VLK +P+++ +FVGQ S G+TQQ+Q +++ F+AG+FNTL+
Sbjct: 485 FASFRDSCEEICRVLKRNDPLIRPHVFVGQAGSANSEGMTQQKQNAVVQDFKAGKFNTLV 544
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
ATS+GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G+ V+LL +G+E +++ +
Sbjct: 545 ATSIGEEGLDIGDVDLIVCYDASSSPIRMLQRIGRTGRKRIGKVVLLLVRGKEENDYAKA 604
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKE 300
Q ++++K I + S Y PR++P K +H VV RV +P +
Sbjct: 605 -QDNYAFIQKSIADTSKYDYRDDQSPRILP-------KDVHPVVDKRVIEIPIENSQPVD 656
Query: 301 -NEKANK 306
NE+ K
Sbjct: 657 LNERGRK 663
>gi|449550734|gb|EMD41698.1| hypothetical protein CERSUDRAFT_128720 [Ceriporiopsis subvermispora
B]
Length = 1302
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 186/345 (53%), Gaps = 46/345 (13%)
Query: 8 VKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCP-- 65
+K+K P+++ L+R+ LA A+ L + Y L +++ D S P
Sbjct: 477 IKTKRAPPYLSGFLNRL--------QPLARAMSYLFEASMEMCYTALHDIATGD-SDPKK 527
Query: 66 --ILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHF------------ 111
K+ Q L+ +++ M H K +L+E+L HF
Sbjct: 528 NSATQKEKAFQTLMSEVR------SMKQRGFPLHPKMEKLQELLVQHFAKEMLDKDERTP 581
Query: 112 -RLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQ 164
+ A+ ++ I+F ++R V E+ ++L P+++A+ F+GQ + G TQ+EQ
Sbjct: 582 GQQAADSAAESRAIVFVSFRQCVDEVVELLSHHNPLIRATRFIGQGTDTKGRKGHTQKEQ 641
Query: 165 KEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRC 224
EI+ KF+ GEFN L++TS+GEEGLDIGE+DL++C+DAQK+PI+M+QR+GRTGRK++G
Sbjct: 642 LEIINKFKTGEFNVLVSTSIGEEGLDIGEVDLIVCYDAQKTPIRMLQRVGRTGRKKDGYV 701
Query: 225 VILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIV- 283
+LL QGRE HN+ + + K + I+ ++ + L + PR++P HV P C+ +V
Sbjct: 702 HVLLAQGREEHNWAKAQSSYKEVQQFIV--RAEHLELYGDVPRLLPEHVKP--DCVEMVM 757
Query: 284 -VKDRVTPAKPSKKKPKENEKANKKSKKKLETDGNSE--PAGKQN 325
+++ V K+ +++ N K+K++ D PAG N
Sbjct: 758 EIEEHVREDSSRKRSFAGDDEPNSKAKRRKRDDNPDRNIPAGAAN 802
>gi|348531601|ref|XP_003453297.1| PREDICTED: Fanconi anemia group M protein homolog [Oreochromis
niloticus]
Length = 1965
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 176/302 (58%), Gaps = 23/302 (7%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ PH+ M++ DF + SL E L+ GLRS + + +
Sbjct: 277 ILARDQFRKNPP--PHLKGPQQGMLEGDFALCISLYHGYELLMQMGLRSLFFYIQGIM-- 332
Query: 61 DGSCPILGKDNDLQNL--LQQLKPKLDINIM------SSEYAWSHLKFIRLREILESHFR 112
DGS + N+LQ +++ M + +SH K +L E++ HFR
Sbjct: 333 DGSREMSRAKNELQRTPTFMDFYKEMETMFMKPSAGPDEPFIYSHPKLEKLEEVVLRHFR 392
Query: 113 LHAEKGE----TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQ 162
L AE +T+V+IF+++R V EI +L P+++ F+GQ+S G TQ+
Sbjct: 393 LWAESSGPQEVSTRVMIFSSFRESVQEIAAMLNRHAPLIRVMTFMGQASAGKGVKGFTQK 452
Query: 163 EQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNG 222
EQ E++ KFR G FNTL++T VGEEGLDIGE+DL++CFDAQK+PI++VQR+GRTGRKR G
Sbjct: 453 EQLEVVHKFRQGGFNTLVSTCVGEEGLDIGEVDLIVCFDAQKNPIRLVQRMGRTGRKRRG 512
Query: 223 RCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHI 282
R V++L +GRE + S +S + I NK+ + ++ N PRM+P + P++ +HI
Sbjct: 513 RIVVILAEGREERTYNQSQSNKRSVYKSITGNKNGF-HMYPNSPRMLPEGLYPKLHKMHI 571
Query: 283 VV 284
Sbjct: 572 TC 573
>gi|402078056|gb|EJT73405.1| ATP-dependent DNA helicase MPH1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1076
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 167/307 (54%), Gaps = 14/307 (4%)
Query: 16 HINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV---SKEDGSCPILGKDND 72
H N+ M+ F + LA A++ L +G+R FY NL ++E G K
Sbjct: 418 HANQGTKMMLMAIFTILQGLAHAIKLLNFHGIRPFYENLAAFRAETEEKGQKGSKYKRQI 477
Query: 73 LQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVV 132
L + Q ++ N + H K L + L +HF + A +G T+VI+F+ YR
Sbjct: 478 LADAGFQEMMEIASNWLKLPDFVGHPKLTHLCDTLLNHF-MDAGEGSNTRVIVFSEYRDS 536
Query: 133 VAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEE 187
EI VL +PMV AS+FVGQ S G+ Q++Q E ++KFR+G FN L+ATS+GEE
Sbjct: 537 AEEIVRVLNMHKPMVNASLFVGQADSKKSEGMKQKQQIETIEKFRSGTFNVLVATSIGEE 596
Query: 188 GLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY 247
GLDIG++DL+IC+DA SPI+M+QR+GRTGRKR G+ +LL +G+E + + Q
Sbjct: 597 GLDIGQVDLIICYDASSSPIRMLQRMGRTGRKRAGKITLLLMKGKEEDKYNQA-QDNYEK 655
Query: 248 VEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKKPKENEKAN 305
++ +I S + R++P V P + + + I V++ A P K +A
Sbjct: 656 MQHLICEGSRFNFRYDLSSRIVPRDVKPEVDKRIVEIPVENTQNTAPPEPK--SRAARAK 713
Query: 306 KKSKKKL 312
K SKKK
Sbjct: 714 KPSKKKF 720
>gi|367043588|ref|XP_003652174.1| hypothetical protein THITE_36500 [Thielavia terrestris NRRL 8126]
gi|346999436|gb|AEO65838.1| hypothetical protein THITE_36500 [Thielavia terrestris NRRL 8126]
Length = 1101
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 183/352 (51%), Gaps = 44/352 (12%)
Query: 16 HINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGK------ 69
H+N+ M+ F + SLA +++ L +G+R FYN+L E + P G
Sbjct: 418 HVNQGTKFMMMAVFSILQSLAHSIKLLNFHGIRPFYNSLAEFRATEEGKPGQGSKLKRQL 477
Query: 70 --DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
D + Q ++ ++ + + + H K L E L +HF A G T+ I+F+
Sbjct: 478 LADENFQKMMSLIERWMKVQGFNG-----HPKLTYLCETLVNHF-ADAGDGSNTRAIVFS 531
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIAT 182
YR EI +L +P++ A++FVGQ S G+ Q++Q E ++KF++G FN L+AT
Sbjct: 532 EYRDSAEEIVRLLN-TQPLISATVFVGQADSKRSGGMKQKQQIETIEKFKSGAFNVLVAT 590
Query: 183 SVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQ 242
S+GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G V+LL +G+E F M
Sbjct: 591 SIGEEGLDIGQVDLIVCYDASASPIRMLQRMGRTGRKRAGNIVLLLMKGKEEEKF---MD 647
Query: 243 TCKSY--VEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLH--IVVKDRVTPAKPSKKKP 298
+Y ++++I + ++ R+IP + P + H I +++ P+ P KK
Sbjct: 648 AKDNYQKMQQLICDGDSFSFRHDLSTRIIPRDIRPEVDKRHVDIPIENSQDPSLPEPKKT 707
Query: 299 KENEKANKKSKKKLETDGNSE-----------PAGKQNKTNAKKTKKQPMMT 339
+ K +KKK E PAG+ A T +QP T
Sbjct: 708 PAGLR-KKPAKKKFNMPDGVETGFVTASSFGRPAGQ-----AAHTYRQPAET 753
>gi|195344412|ref|XP_002038781.1| GM10427 [Drosophila sechellia]
gi|194133802|gb|EDW55318.1| GM10427 [Drosophila sechellia]
Length = 1593
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 172/311 (55%), Gaps = 35/311 (11%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCP-ILGKDNDLQNLLQQLKP 82
+I +F + S+ +L+ + +GLR F NN + EDG +L +D +L+NL++Q++
Sbjct: 326 IIMSNFAMCISMYHSLDLMERHGLRVFVNNFD--ADEDGREKFVLARDGNLRNLVEQVRQ 383
Query: 83 KLDINIMS---------------SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
+L N + S + H K+ +LR++L HF+ + + ++ I+F
Sbjct: 384 ELGANPLDYTTHAMTNGEVPPLPSNLDFGHAKYEKLRQVLVQHFQANPD----SRAIVFC 439
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQSSGV------TQQEQKEIMKKFRAGEFNTLIA 181
YR V I +L P+++ FVGQ S V TQ++Q +IM FR+G N L+A
Sbjct: 440 EYRESVMLIHRLLLQHRPVLRPRCFVGQGSTVGASYALTQKQQLQIMTDFRSGTSNVLVA 499
Query: 182 TSVGEEGLDIGEIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
TS+GEEGLD+GE+++++CFD +P + +QR+GRTGRK+NG V+L+T+GRE +
Sbjct: 500 TSIGEEGLDVGEVEMIVCFDICSTNPTRFIQRIGRTGRKKNGEVVMLVTEGREQQVLKDV 559
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKE 300
+ +K++N+ + +L K PRM+P P KC V+ + P K KPK
Sbjct: 560 LANKDQINKKLLNSSVVKFSLYKQNPRMVPLKFQP--KC----VEKHMEPIAEEKPKPKS 613
Query: 301 NEKANKKSKKK 311
+ K + K+K
Sbjct: 614 SAKTKESRKRK 624
>gi|452979526|gb|EME79288.1| hypothetical protein MYCFIDRAFT_142855, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 778
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 162/275 (58%), Gaps = 33/275 (12%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPK 83
M+ F V SLA ++ L +G+ FY+ ++ ++ S GK N+
Sbjct: 378 MMNAAFTVLSSLAHSISLLKHHGIGPFYSGVLAFQRQVESGESKGKT--AANIAH----- 430
Query: 84 LDIN---IMSSEYAWS-------HLKFIRLREILESHFRLHAEKG--------ETTKVII 125
D N +MS+ W+ H K LREI+ +HF L A +G T+V++
Sbjct: 431 -DENFSKMMSTIRTWTNNPEFIGHPKLEYLREIVLNHF-LDAGEGRQGSDVPPSATRVMV 488
Query: 126 FANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLI 180
FA+YR +I VLK EPM++ +FVGQ++ G+ Q++Q E+++ F++G+FNTLI
Sbjct: 489 FASYRDSTEDICRVLKRNEPMIRPQVFVGQAASKGQEGMNQKKQNEVIQDFKSGKFNTLI 548
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
ATS+GEEGLDIG +DL++C+DA SPI+M+QR+GRTGRKR GR +LL +G+E +++ +
Sbjct: 549 ATSIGEEGLDIGTVDLIVCYDASSSPIRMLQRIGRTGRKRLGRVCLLLMKGKEEKDYEKA 608
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTP 275
Q +Y++K I + + Y+ PR++P + P
Sbjct: 609 -QDNYAYIQKSIADATKYSYRDDQSPRILPKEIKP 642
>gi|346978259|gb|EGY21711.1| helicase C-terminal domain-containing protein [Verticillium dahliae
VdLs.17]
Length = 1128
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 168/291 (57%), Gaps = 22/291 (7%)
Query: 7 YVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNL------VEVSKE 60
++KS + H+ + L M++ F + SLA +++ L +G++ F++NL VE +
Sbjct: 415 WMKSAGR--HVPQPLQHMMRAIFAILKSLAHSIKLLNFHGIKPFFDNLKDFRSDVEEKGQ 472
Query: 61 DGSC--PILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKG 118
GS L D Q ++Q+++ L I H K L E + +HF + A++G
Sbjct: 473 KGSKYKKQLVADPSFQEMMQKVEGWLRIPSFVG-----HPKLAELAETMLNHF-MDAKEG 526
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRA 173
T+ I+F+ YR EI L +P++K ++FVGQ S+G+ Q +Q E ++KFR
Sbjct: 527 SATRAIVFSEYRDSAEEIVRALSIHKPLIKPTVFVGQAEGKRSAGMKQAQQIETVEKFRT 586
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
GE+N L+ATS+GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G V+LL +G+E
Sbjct: 587 GEYNVLVATSIGEEGLDIGQVDLIVCYDASSSPIRMLQRMGRTGRKREGNVVLLLMRGKE 646
Query: 234 AHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVV 284
+F + + ++ ++ +I S + R++P + P + I +
Sbjct: 647 EESFSRARENYEA-MQALICEGSKFNFRHDLSARIVPREIRPEVDMQQIEI 696
>gi|270010010|gb|EFA06458.1| hypothetical protein TcasGA2_TC009341 [Tribolium castaneum]
Length = 1313
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 140/227 (61%), Gaps = 17/227 (7%)
Query: 67 LGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
LG D ++Q L P + + + H KF +LR+IL +HF +T+VI+F
Sbjct: 273 LGPDPEVQPL-----PDGTFAEIPASIKFGHPKFYQLRDILVAHF---TNSDASTRVIVF 324
Query: 127 ANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGE 186
YR E + +L P++++ +FVGQ +GVTQ+EQ +K FR G NTL++T +GE
Sbjct: 325 FEYRESATEAYALLTRSFPLIRSRVFVGQRAGVTQKEQINTVKSFREGTCNTLLSTCIGE 384
Query: 187 EGLDIGEIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCK 245
EGLD+GE+DL++CFD A KSPI+M+QR+GRTGRK+ GR V+L+T+GRE Q +++ C
Sbjct: 385 EGLDVGEVDLIVCFDIANKSPIRMIQRMGRTGRKKEGRVVVLVTEGRE----QQTLKDCL 440
Query: 246 SYVEKI----INNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRV 288
Y + N++ + + P+MIP++V P+ + + I VK V
Sbjct: 441 IYKNNLGSFATNSQLLQEGKYTDNPKMIPSYVQPKCQKMCITVKKPV 487
>gi|296421581|ref|XP_002840343.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636558|emb|CAZ84534.1| unnamed protein product [Tuber melanosporum]
Length = 1066
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 171/314 (54%), Gaps = 22/314 (7%)
Query: 18 NRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGK-------D 70
N L M+ F SLA L L +G+R F+N L EV E S P GK D
Sbjct: 426 NPALKGMMLNAFSTLSSLALPLHFLTEHGVRVFFNKLSEVQAEVFSNPKGGKTKKGIIND 485
Query: 71 NDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGET---TKVIIFA 127
+ + ++ + + ++S++ H K L ++ HF AE ET T+++IF
Sbjct: 486 ENFRKVMGKCQ-----ELVSNKEYSGHPKLDYLASVVLKHF-FDAEDAETKRETRIMIFT 539
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIAT 182
+YR EI VL +P+VK +FVGQ+ G + Q++Q E++K F+ G +N ++AT
Sbjct: 540 SYRSSAEEIVRVLSKHQPIVKPHIFVGQADGKGVEGMKQKDQIEVIKDFQVGIYNVIVAT 599
Query: 183 SVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQ 242
S+GEEGLDIGE+D++IC+D Q S I+++QR+GRTGRKR+G ILLTQG+E NF+ + +
Sbjct: 600 SIGEEGLDIGEVDMIICYDQQGSSIRLLQRMGRTGRKRDGHVHILLTQGKEEDNFKRATR 659
Query: 243 TCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENE 302
+++ I + + PR++P + + I + T +P K+K K
Sbjct: 660 D-HEFIQGEIESGKRFNYHHDLSPRIVPRDIECVVDRKVIEIPAENTQPEPPKRKLKGKG 718
Query: 303 KANKKSKKKLETDG 316
K K +KK L DG
Sbjct: 719 KQTKVTKKFLMPDG 732
>gi|194899456|ref|XP_001979275.1| GG24642 [Drosophila erecta]
gi|190650978|gb|EDV48233.1| GG24642 [Drosophila erecta]
Length = 1450
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 170/298 (57%), Gaps = 29/298 (9%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPK 83
+I +F + S+ +LE + +GLR F NN + ++ +L +D DL+NL++Q++ +
Sbjct: 330 IITGNFAMCISMYHSLELMERHGLRVFVNNF-DAAENGREKFVLARDGDLRNLVEQVRQE 388
Query: 84 LDINIMS---------------SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFAN 128
L N + S+ + H K+ +LR++L HF+ +A+ ++ I+F
Sbjct: 389 LGANPLDYTTHAMTNGEVPPVPSDLDFGHAKYEKLRQVLVQHFQANAD----SRAIVFCE 444
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQSSGV------TQQEQKEIMKKFRAGEFNTLIAT 182
YR V I +L P+++ FVGQ S V TQ++Q +IM FR+G N L+AT
Sbjct: 445 YRESVMLIHRLLLQHRPLLRPRCFVGQGSTVGASYALTQKQQLQIMADFRSGTSNVLVAT 504
Query: 183 SVGEEGLDIGEIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
S+GEEG+D+GE+++++CFD +P + VQR+GRTGRK+NG V+L+T+GRE + +
Sbjct: 505 SIGEEGIDVGEVEMIVCFDICSSNPTRFVQRIGRTGRKKNGEVVMLVTEGREQQVLKDVL 564
Query: 242 QTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHI--VVKDRVTPAKPSKKK 297
+K++N+ + +L + PRM+P+ P+ + H+ VV++ P +K K
Sbjct: 565 ANKDQINKKLLNSSVVKLSLYEQNPRMVPSQFQPKCEEKHMEPVVEENPKPKSLAKIK 622
>gi|302411438|ref|XP_003003552.1| helicase C-terminal domain-containing protein [Verticillium
albo-atrum VaMs.102]
gi|261357457|gb|EEY19885.1| helicase C-terminal domain-containing protein [Verticillium
albo-atrum VaMs.102]
Length = 1128
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 168/291 (57%), Gaps = 22/291 (7%)
Query: 7 YVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNL------VEVSKE 60
++KS + H+ + L M++ F + SLA +++ L +G++ F++NL VE +
Sbjct: 415 WMKSAGR--HVPQPLQHMMRAIFAILKSLAHSIKLLNFHGIKPFFDNLKDFRSDVEEKGQ 472
Query: 61 DGSC--PILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKG 118
GS L D Q+++Q+++ L I H K L E + +HF + A++G
Sbjct: 473 KGSKYKKQLVADPSFQDMMQKIEGWLRIPSFVG-----HPKLAELAETMLNHF-MDAKEG 526
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRA 173
T+ I+F+ YR EI L +P++K ++FVGQ S+G+ Q +Q ++KFR
Sbjct: 527 SATRAIVFSEYRDSAEEIVRALSIHKPLIKPTVFVGQAEGKRSAGMKQAQQIATVEKFRT 586
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
GE+N L+ATS+GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G V+LL +G+E
Sbjct: 587 GEYNVLVATSIGEEGLDIGQVDLIVCYDASSSPIRMLQRMGRTGRKREGNVVLLLMRGKE 646
Query: 234 AHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVV 284
+F + + ++ ++ +I S + R++P + P + I +
Sbjct: 647 EESFSRARENYEA-MQALICEGSKFNFRHDLSARIVPREIRPEVDMQQIEI 696
>gi|452836449|gb|EME38393.1| hypothetical protein DOTSEDRAFT_75812 [Dothistroma septosporum
NZE10]
Length = 913
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 156/272 (57%), Gaps = 27/272 (9%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPK 83
M+ F V SLA ++ L +G+ FY+ ++ +E S K +
Sbjct: 233 MMNAIFTVLSSLAHSIGLLKFHGIGPFYSGVIAFQQEVESGQTKSKTATGIAHSDHFR-- 290
Query: 84 LDINIMSSEYAWS-------HLKFIRLREILESHFRLHAEKG--------ETTKVIIFAN 128
+MS+ W+ H K +RE++ +HF L A +G T+V+IFA+
Sbjct: 291 ---TMMSTIRTWTNDPNFVGHPKLEYVREVVLNHF-LDAGEGMQGSDVPPSATRVMIFAS 346
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATS 183
YR V EI VLK EPM++ +FVGQ S G+ Q++Q +++ F++G++NTL+ATS
Sbjct: 347 YRDSVEEIVRVLKRNEPMIRPHVFVGQAASKGSEGMDQKKQNAVIQDFKSGKYNTLVATS 406
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQT 243
+GEEGLDIG +DL++C+DA SPI+M+QR+GRTGRKR GR V+LL + +E ++ + Q
Sbjct: 407 IGEEGLDIGTVDLIVCYDASSSPIRMLQRIGRTGRKRVGRVVLLLMKEKEESDYAKA-QD 465
Query: 244 CKSYVEKIINNKSIYANLAKNGPRMIPAHVTP 275
+Y++K I + S YA PR++P + P
Sbjct: 466 NYAYIQKSIADASKYAYRDDQSPRILPREIKP 497
>gi|116008407|ref|NP_650971.2| CG7922, isoform A [Drosophila melanogaster]
gi|442620307|ref|NP_001262806.1| CG7922, isoform B [Drosophila melanogaster]
gi|113194811|gb|AAF55897.2| CG7922, isoform A [Drosophila melanogaster]
gi|440217713|gb|AGB96186.1| CG7922, isoform B [Drosophila melanogaster]
Length = 1489
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 172/311 (55%), Gaps = 35/311 (11%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCP-ILGKDNDLQNLLQQLKP 82
+I +F + S+ +L+ + +GLR F NN + +DG +L +D +L+NL++Q++
Sbjct: 326 IIMGNFAMCISMYHSLDLMERHGLRVFVNNFD--ADDDGREKFVLARDGNLRNLVEQVRQ 383
Query: 83 KLDINIMS---------------SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
+L N + S+ + H K+ +LR++L HF+ + + ++ I+F
Sbjct: 384 ELGANPLDYTTHAMTNGEVPPLPSDLDFGHAKYEKLRQVLVQHFQANPD----SRAIVFC 439
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQSSGV------TQQEQKEIMKKFRAGEFNTLIA 181
YR V I +L P+++ FVGQ S V TQ++Q +IM FR+G N L+A
Sbjct: 440 EYRESVMLIHRLLLQHRPVLRPRCFVGQGSTVGASYALTQKQQLQIMTDFRSGTSNVLVA 499
Query: 182 TSVGEEGLDIGEIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
TS+GEEGLD+GE+++++CFD +P + +QR+GRTGRK+NG V+L+T+GRE +
Sbjct: 500 TSIGEEGLDVGEVEMIVCFDICSTNPTRFIQRIGRTGRKKNGEVVMLVTEGREQQVLKDV 559
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKE 300
+ +K++N+ + +L + PRM+P+ P+ + H+ P K KPK
Sbjct: 560 LANKDQINKKLLNSSVVKLSLYEQNPRMVPSKFQPKCEEKHM------EPVAEEKPKPKS 613
Query: 301 NEKANKKSKKK 311
K + K+K
Sbjct: 614 AAKTKESRKRK 624
>gi|301617487|ref|XP_002938176.1| PREDICTED: Fanconi anemia group M protein-like [Xenopus (Silurana)
tropicalis]
Length = 2037
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 116/170 (68%), Gaps = 9/170 (5%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAG 174
T+++IF+++R V EI ++L P V+ FVG SS G TQ+EQ E++K+FR G
Sbjct: 558 TRIMIFSSFRDSVQEIAEMLNQHHPTVRVMTFVGHSSAGKGVKGFTQKEQLEVVKRFREG 617
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREA 234
FNTL++T VGEEGLDIGE+DL+ICFDAQKSPI++VQR+GRTGRKR GR V++L QGRE
Sbjct: 618 GFNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLVQRMGRTGRKRQGRIVVILCQGREE 677
Query: 235 HNFQTSMQTCKSYVEKII-NNKSIYANLAKNGPRMIPAHVTPRIKCLHIV 283
+ S +S + I+ NNK ++ N PRM+P + P++ + I
Sbjct: 678 RTYNQSQSNKRSIFKAILGNNKMLHLN--PQSPRMVPEGLNPKVHKMFIT 725
>gi|328791598|ref|XP_393083.4| PREDICTED: Fanconi anemia group M protein [Apis mellifera]
Length = 1194
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 172/299 (57%), Gaps = 22/299 (7%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKL 84
I + ++ ++ A E ++ GLR+FY + + + +++ LQ LL+ +K L
Sbjct: 296 IIKTLNILMTMYHAYELMIRDGLRAFY----KFYQNHSDKFWMNEESQLQILLEDVKTYL 351
Query: 85 ----DINIMSSE--------YAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVV 132
D ++ E + H KF +L+E+L HF+ + + T+ I+F YR +
Sbjct: 352 GPFPDTKVLCEETIMEIPQNLIFGHTKFDKLKELLICHFKNNEKNENNTRAIVFVEYRDI 411
Query: 133 VAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIG 192
V+EI+ +L +P+++ MFVGQ+ +Q+ K ++ F+ N LI+TS+GEEGLD+G
Sbjct: 412 VSEIYILLLQCQPLIRPQMFVGQAGQKQKQQIKA-LENFKNNYVNVLISTSIGEEGLDVG 470
Query: 193 EIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKI 251
E+DL+ICFD +Q SP ++VQR+GRTGRKR+G +IL+T G+E ++++ S K+
Sbjct: 471 EVDLIICFDVSQHSPTRLVQRMGRTGRKRDGHIIILVTDGKEHEMLKSTIARRDSLNYKV 530
Query: 252 INNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKK 310
+N +I+++L +N PRMIP + P +HI ++ P P K +AN K KK
Sbjct: 531 LNTNNIFSSLYQNNPRMIPDILIPECLKMHISIQ----PKTPVIKYKNRKREANNKEKK 585
>gi|358341274|dbj|GAA27796.2| fanconi anemia group M protein [Clonorchis sinensis]
Length = 1444
Score = 171 bits (433), Expect = 6e-40, Method: Composition-based stats.
Identities = 116/351 (33%), Positives = 172/351 (49%), Gaps = 54/351 (15%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNL--------VEVSKEDGSCPILGKDNDLQNL 76
+Q DF L A+E L +GLR Y L S + G + +L
Sbjct: 393 VQCDFGSVICLLHAMELLDQHGLRPLYQYLGGVLNGQRASASVRAEMMRLSGVEQLWSDL 452
Query: 77 LQQLKPKLDINIMSSE---YAWSHLKFIRLREILESHFRLHAEKGE-TTKVIIFANYRVV 132
+ + KP + SS + H K +L+++L HFR HA + T+VI+F+ +R
Sbjct: 453 VTRFKPAPGADNPSSTQAPFVGGHPKLEKLKQLLVQHFRSHAPTAQGETRVIVFSQFRDS 512
Query: 133 VAEIFDVLKPLEPMVKASMFVGQSSG-------------------------------VTQ 161
V EI +LK L P+V+ + F+GQ SG ++Q
Sbjct: 513 VEEIMHMLKQLRPLVRPASFIGQGSGTNRSPVLAGSGPDAKMSTSPLMPSNRLTSGGISQ 572
Query: 162 QEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN 221
++Q +M FR G +NTL++T VGEEGLD+G++DL+ICFDA KSP++++QRLGRTGR+R
Sbjct: 573 RDQLRVMDAFRKGVYNTLVSTCVGEEGLDVGQVDLIICFDAFKSPVRLMQRLGRTGRQRL 632
Query: 222 GRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLA--KNGPRMIPAHVTP---- 275
GR V+LLT+GRE N SM S + + + Y LA + PRMIP +TP
Sbjct: 633 GRIVMLLTEGREERNHAVSMAR-TSTIHRALLEGGAYKRLAFYPHNPRMIPLGITPEVDF 691
Query: 276 RIKCLHIVVKDRVTPA----KPSKKKPKENEKANKKSKKKLETDGNSEPAG 322
R+ + KD V P +K+P K + E +++ G
Sbjct: 692 RVLEPEVSTKDTVLPTVSNESTCRKRPSRAGKNRLSGRTPDEAQSHADAVG 742
>gi|296811414|ref|XP_002846045.1| helicase C-terminal domain-containing protein [Arthroderma otae CBS
113480]
gi|238843433|gb|EEQ33095.1| helicase C-terminal domain-containing protein [Arthroderma otae CBS
113480]
Length = 1092
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 154/266 (57%), Gaps = 25/266 (9%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEV--SKEDGSCPILGK-------DNDLQNLLQQ 79
F V SLA A+E L +G+ FY NLV DGS GK D + ++++
Sbjct: 539 FTVLASLAHAIELLKYHGVGPFYRNLVSFCDGPTDGSQGKGGKYARQILDDGNFKSMMTT 598
Query: 80 LKPKLDINIMSSEYAWSHLKFIRLREILESHF-----RLHAEKGETTKVIIFANYRVVVA 134
L+ K M+ E H K L+ ++ +HF H T+V++F+++R
Sbjct: 599 LRSK-----MADEDFIGHPKLEYLKRVILNHFLDADANSHGGAPPKTRVMVFSHFRDSAE 653
Query: 135 EIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
EI VLK P++ +FVGQ+S G+ Q++Q EI+KKF+ G +NT++ATS+GEEGL
Sbjct: 654 EIVRVLKKHAPIILPHVFVGQASAKGSEGMDQKKQLEIIKKFKEGTYNTIVATSIGEEGL 713
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVE 249
DIGE+DL+IC+D+ SPI+M+QR+GRTGRKR G+ V+LL +G+E + + + ++
Sbjct: 714 DIGEVDLIICYDSSASPIRMLQRMGRTGRKRTGKVVLLLMEGKEEEKYFRAKDNYEK-MQ 772
Query: 250 KIINNKSIYANLAKNGPRMIPAHVTP 275
+II + S + PR+IP + P
Sbjct: 773 QIIASGSRFTFHEDKSPRIIPRDIQP 798
>gi|430814617|emb|CCJ28178.1| unnamed protein product [Pneumocystis jirovecii]
gi|430814620|emb|CCJ28181.1| unnamed protein product [Pneumocystis jirovecii]
Length = 882
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 164/288 (56%), Gaps = 12/288 (4%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLD-IN 87
F SLA + L+ +G+ FY + E++ LGK +++K + I
Sbjct: 373 FSFLSSLAYPMSLLICHGINPFYAKIKELTDNKS----LGKYKSFLRNDERIKQIVSLIE 428
Query: 88 IMSSEYAW-SHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM 146
M S+ ++ H K +LR ++ +HF K E T+ +IF YR +I LK P+
Sbjct: 429 DMKSKPSFIGHPKLDKLRSLILNHFANTDTKNEETRAMIFVEYRSSAEDIIKSLKEHYPL 488
Query: 147 VKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFD 201
++A +F+GQSS G++Q+EQ I++KF++G FNTL+ATS+GEEGLDIGE+DL+IC+D
Sbjct: 489 IRAQLFIGQSSNKSSLGMSQKEQISIVEKFKSGSFNTLVATSIGEEGLDIGEVDLIICYD 548
Query: 202 AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANL 261
+ S +++QR+GRTGRKR G ILL+ GRE ++ + ++ K ++K I N ++
Sbjct: 549 STSSSTRLLQRMGRTGRKRQGHIYILLSTGREERSYFRAKESYK-IIQKAIANGNLLELQ 607
Query: 262 AKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSK 309
K PR+IP P + IV+ ++ + K K+ E ++K K
Sbjct: 608 EKMSPRIIPNLENPECQKQEIVIPEKNISTNLTHKYTKQYETKHQKRK 655
>gi|213406229|ref|XP_002173886.1| ATP-dependent 3' to 5' DNA helicase [Schizosaccharomyces japonicus
yFS275]
gi|212001933|gb|EEB07593.1| ATP-dependent 3' to 5' DNA helicase [Schizosaccharomyces japonicus
yFS275]
Length = 812
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 155/264 (58%), Gaps = 19/264 (7%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEVSKED-----GSCPILGKDNDLQNLLQQLKPK 83
FH + + L +GL FY LVE+ K+ G L + Q L++ L+ +
Sbjct: 404 FHALITCTHLVYLLECHGLSQFYEKLVEIQKQAREKGFGELYQLSCNTQYQLLIEYLQEE 463
Query: 84 LDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPL 143
+ S + SH K +L+E+LE HF +++ + T+V+IF +R I + L
Sbjct: 464 I-----SKDGYISHPKIEKLKELLEKHFTKASQEKQNTRVMIFTEFRSTAEIIMESLATF 518
Query: 144 EPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVI 198
+ V+ S+FVGQ+S G++Q+ QKEI++++R+G NTLIATS+GEEGLDI + D++I
Sbjct: 519 DDCVRPSLFVGQASRSESFGMSQKLQKEILQRYRSGLINTLIATSIGEEGLDIQDTDMII 578
Query: 199 CFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIY 258
C+D SPI+M+QR+GRTGRKRNG I LTQ E + +Q + + + +++ + K +
Sbjct: 579 CYDVSSSPIRMLQRIGRTGRKRNGLAYIFLTQNCEDNKWQRAKDSYRRVQKQLESGKKV- 637
Query: 259 ANLAKNGPRMIPAHVTPRIKCLHI 282
L + PR++PA + P +CL +
Sbjct: 638 -QLKTDVPRILPADIVP--ECLFV 658
>gi|449689367|ref|XP_002165117.2| PREDICTED: uncharacterized protein LOC100207251, partial [Hydra
magnipapillata]
Length = 872
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/313 (35%), Positives = 165/313 (52%), Gaps = 63/313 (20%)
Query: 18 NRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNL----------------------- 54
+R + +I+ DF + SL A E L+ +GL SFYN L
Sbjct: 47 DRQIAGVIEGDFGLCISLYYAYELLLQHGLLSFYNFLKGVLSGVKGTPLCRKELSQNIAF 106
Query: 55 --------VEVSKEDGSCP----ILGKD-NDLQNLLQQL-KPKLDINIMSSEYAWSHLKF 100
E+ EDG +LGK+ + Q LL+ + KP N SH K
Sbjct: 107 MDMMEELHSEIEPEDGESLNESIMLGKNISAKQRLLKSIPKPLSSFN--------SHPKL 158
Query: 101 IRLREILESHFRLHAEKGE-------TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFV 153
++L EI+ HFR T+V+IF+ YR V EI +L EP++K F+
Sbjct: 159 LKLEEIVLEHFRRFCPNSSKSVQTPLNTRVMIFSQYRDSVQEITALLSKHEPLIKVMSFI 218
Query: 154 GQSS----------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQ 203
GQ + G++Q+EQ E+++KFR G +NT+++TSVGEEGLDIG++DL++CFDA
Sbjct: 219 GQGNKETAGGKNTKGLSQKEQFEVLQKFRNGGYNTIVSTSVGEEGLDIGDVDLIVCFDAS 278
Query: 204 KSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAK 263
SPI++VQR+GRTGR R+GR VIL+ +G+E ++ + K + K + + +L +
Sbjct: 279 NSPIRLVQRMGRTGRVRDGRIVILIGEGKEEATYKKCLSN-KKGIHKNLLTAAKALSLYE 337
Query: 264 NGPRMIPAHVTPR 276
RMIP H+ P+
Sbjct: 338 ENHRMIPRHLNPK 350
>gi|194745250|ref|XP_001955101.1| GF18603 [Drosophila ananassae]
gi|190628138|gb|EDV43662.1| GF18603 [Drosophila ananassae]
Length = 1475
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 162/282 (57%), Gaps = 29/282 (10%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCP-ILGKDNDLQNLLQQLKP 82
+I +F + SL +LE + +GLR F NN + EDG +L +D L++L++Q++
Sbjct: 329 IIMGNFSMCISLYHSLELMERHGLRVFVNNFD--ADEDGREKFVLARDRQLRDLVEQVRQ 386
Query: 83 KLDINIMS---------------SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
+L N ++ ++ + H K+ +LR++L HF H++ ++ I+F
Sbjct: 387 ELGANPLNYTTNAMTNGEVPPLPADLDFGHAKYEKLRQVLLQHFESHSD----SRAIVFC 442
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQ------SSGVTQQEQKEIMKKFRAGEFNTLIA 181
YR V I +L P+++ FVGQ S +TQ++Q +IM FR+G N L+A
Sbjct: 443 EYRESVMLIQRLLLQHRPLLRPRCFVGQGATVGASYALTQKQQLQIMADFRSGTSNVLVA 502
Query: 182 TSVGEEGLDIGEIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
TS+GEEG+D+GE+++++CFD +P + VQR+GRTGRK+NG V+L+T+GRE +
Sbjct: 503 TSIGEEGIDVGEVEMIVCFDICSSNPTRFVQRIGRTGRKKNGEVVMLVTEGREQQILKDV 562
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHI 282
+ KI+N+ ++ +L ++ PRM+P P+ + H+
Sbjct: 563 LAHKDQINRKILNSSAVQVSLYQHNPRMVPLQFNPKCEEKHM 604
>gi|345566720|gb|EGX49662.1| hypothetical protein AOL_s00078g151 [Arthrobotrys oligospora ATCC
24927]
Length = 1021
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 157/271 (57%), Gaps = 24/271 (8%)
Query: 34 SLASALENLVTYGLRSFYNNLVEVSKEDG--------SCPILGKDNDLQNLLQQLKPKLD 85
SLA + E L+ +G+R FY+ L E E + L +D ++ + +
Sbjct: 420 SLAYSWELLLYHGIRPFYDYLREFQNEKSSKSSGGGKAVSALFQDKQFLAMMNRCR---- 475
Query: 86 INIMSSEYAWSHLKFIRLREILESHFRLHAEKGE-TTKVIIFANYRVVVAEIFDVLKPLE 144
+ + + H K L + HF AE+GE T+V++F+NYR EI VLK E
Sbjct: 476 -GLTNEKEFLGHPKLDYLCGTILRHFTEAAERGEKDTRVMVFSNYRKSGDEILRVLKIHE 534
Query: 145 PMVKASMFVGQSSGVT-----QQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVIC 199
P++K +FVGQS+G T Q+ Q+E +++F+ GEFN L+ATS+GEEGLDIGE+D ++C
Sbjct: 535 PIIKPRIFVGQSAGTTGEGMSQKVQQETVERFKNGEFNVLVATSIGEEGLDIGEVDFIVC 594
Query: 200 FDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYA 259
FDA SPI+M+QR+GRTGRKR G V+L+T+G+E ++ + + +++ I + +
Sbjct: 595 FDASASPIRMLQRMGRTGRKRAGGVVVLVTEGKEEAKWERAQDNYR-WMQNAITKGNTFT 653
Query: 260 NLAKNGPRMIPAHVTPRIKCLHIVVKDRVTP 290
+ PR++P + +C+ + ++ +TP
Sbjct: 654 YDKEISPRILPNDI--ETECVKMTIE--ITP 680
>gi|390132011|gb|AFL55357.1| Fanconia anemia complementation group M-like protein [Arabidopsis
thaliana]
Length = 1344
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 169/298 (56%), Gaps = 19/298 (6%)
Query: 1 MLAKDKYVKSK-AQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSK 59
++A+DK+ ++ PH+N ++ F +L + L ++G+R Y L E K
Sbjct: 361 LMARDKFRQAPLPGLPHVNHG---DVESCFAALITLYHIRKLLSSHGIRPAYEMLEEKLK 417
Query: 60 EDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE 119
E ++ K+ D++ ++ +L S K ++ EIL HF++ K
Sbjct: 418 EGPFARLMSKNEDIRMTKLLMQQRLSHGAPSP-------KLSKMLEILVDHFKVKDPK-- 468
Query: 120 TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVT-----QQEQKEIMKKFRAG 174
T++VIIF+N+R V +I + L + MVKA+ F+GQSSG T Q+ Q+ +++KFRAG
Sbjct: 469 TSRVIIFSNFRGSVRDIMNALSNIGDMVKATEFIGQSSGKTLKGQSQKIQQAVLEKFRAG 528
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREA 234
FN ++ATS+GEEGLDI E+DLVICFDA SP++M+QR+GRTGRK NGR V+L +G E
Sbjct: 529 GFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRKNNGRVVVLACEGSEK 588
Query: 235 HNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAK 292
+++ + ++ + + N + N + PRMIP P ++ + +K V K
Sbjct: 589 NSYMRKQASGRAIKKHMRNGGTNSFNFHPS-PRMIPHVYKPEVQHVEFSIKQFVPRGK 645
>gi|322708815|gb|EFZ00392.1| ATP-dependent DNA helicase mph1 [Metarhizium anisopliae ARSEF 23]
Length = 1077
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 165/297 (55%), Gaps = 22/297 (7%)
Query: 16 HINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQN 75
H N+ + M++ F V SLA +++ L +G++ FY+N+ + E GK
Sbjct: 419 HANQGVQFMMRAIFSVLTSLAHSIKLLNFHGIKPFYDNMKDFRSEQE-----GKGEKGSK 473
Query: 76 LLQQLKPKLDINIMSSEYA-W-------SHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
+QL M + W H K L + + +HF E G TT+VI+F+
Sbjct: 474 YKRQLIEHSSFQKMMDHISRWLRTDGFVGHPKLAALVDCVLNHFMDQGE-GSTTRVIVFS 532
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIAT 182
YR +I L +P++KAS+FVGQ+ G + Q +Q + ++KFR GEFN L+AT
Sbjct: 533 EYRDSAEDIVCQLNKHQPLLKASVFVGQADGKRGEGMKQAQQIQTIEKFRKGEFNVLVAT 592
Query: 183 SVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQ 242
S+GEEGLDIG++DL++C+D+ SPI+M+QR+GRTGRKR G V+LL +G+E F S
Sbjct: 593 SIGEEGLDIGQVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLLLMRGKEEDQFAKSKD 652
Query: 243 TCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKK 297
+ +S ++K+I S + R++P + P + K + I V++ P+ P KK
Sbjct: 653 SYES-MQKLICEGSRFNFRFDLSMRIVPREIRPEVDKKFVEIPVENTQDPSLPEPKK 708
>gi|171687943|ref|XP_001908912.1| hypothetical protein [Podospora anserina S mat+]
gi|170943933|emb|CAP69585.1| unnamed protein product [Podospora anserina S mat+]
Length = 1064
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 181/309 (58%), Gaps = 27/309 (8%)
Query: 16 HINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV--SKED--GSCPILGK-- 69
H N+ L + F + SLA +++ L +G++ FY+NL+E S+E+ G + +
Sbjct: 420 HANQGLKFAMFAVFSILQSLAHSIKLLNFHGIKPFYHNLLEFRNSEEEKGGKGSSMRRQV 479
Query: 70 --DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
D + ++ ++ + ++ S H K L E L HF + A +G +T+VI+F+
Sbjct: 480 INDESFKKMMTMIEKWMKLDGFSG-----HPKLDCLCETLMHHF-MDAGEGSSTRVIVFS 533
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIAT 182
YR EI VL +P++ A++FVGQ S G+ Q++Q E ++KF+ G++N L+AT
Sbjct: 534 EYRDSAEEIVRVLNS-KPLISATVFVGQADSKRSEGMKQKQQIETIEKFKNGQYNVLVAT 592
Query: 183 SVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQ 242
S+GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G+ V+LL +G+E F ++
Sbjct: 593 SIGEEGLDIGQVDLIVCYDASSSPIRMLQRMGRTGRKRAGKIVLLLMKGKEQEKF---LE 649
Query: 243 TCKSY--VEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKKP 298
+Y ++++I + + R+IP + P + + + I +++ P+ P KK
Sbjct: 650 AKDNYARMQQLICDGDSFNFRHDLSTRIIPRDIKPEVDKRMVEIPIENTQDPSLPEPKKA 709
Query: 299 KENEKANKK 307
+KA+KK
Sbjct: 710 GARKKASKK 718
>gi|402876056|ref|XP_003901798.1| PREDICTED: Fanconi anemia group M protein [Papio anubis]
Length = 1980
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 158/264 (59%), Gaps = 35/264 (13%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGVIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS--------------EYAWSHLKF 100
DG+ + LG++ D L L+ +S ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNHLECMFAHTRSTSADSVSAIQQGDKNKKFVYSHPKL 450
Query: 101 IRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 451 KKLEEVVIEHFKSWNAENTSEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVG 510
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFD+QKSPI++
Sbjct: 511 HASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRL 570
Query: 210 VQRLGRTGRKRNGRCVILLTQGRE 233
VQR+GRTGRKR GR V++L++GRE
Sbjct: 571 VQRMGRTGRKRQGRIVVILSEGRE 594
>gi|310793920|gb|EFQ29381.1| type III restriction enzyme [Glomerella graminicola M1.001]
Length = 1113
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 167/306 (54%), Gaps = 30/306 (9%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGK-----------DND 72
M++ F + SLA A++ L +G+R FY NL E G +G+ D
Sbjct: 447 MMRAIFSILQSLAHAIKLLNFHGIRPFYENLKEFR---GGVEDMGEKGSKYKKQIVNDQS 503
Query: 73 LQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGET-TKVIIFANYRV 131
Q ++ +++ + +E H K L++ + +HF + G T T++I+F+ YR
Sbjct: 504 FQEMMTRVE-----KWLRTEGFVGHPKLAALQDTVLNHF---MDAGATSTRIIVFSEYRD 555
Query: 132 VVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGE 186
+I VL +P++KA++FVGQ S+G+ Q EQ ++KF+ GE+N L+ATS+GE
Sbjct: 556 SAEDIVRVLNVHKPLIKATVFVGQADSKRSAGMKQSEQIATIQKFKDGEYNVLVATSIGE 615
Query: 187 EGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKS 246
EGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G V+LL +G+E F S +
Sbjct: 616 EGLDIGQVDLIVCYDASSSPIRMLQRMGRTGRKRAGNIVLLLMRGKEEDAFARSKDNY-A 674
Query: 247 YVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANK 306
++K+I S + R++P + P + HI + T PS +PK+ K
Sbjct: 675 EMQKLICEGSKFNFRHDLSARIVPRDIRPEVNLQHIEIPIENT-QNPSLPEPKKGRARKK 733
Query: 307 KSKKKL 312
KK
Sbjct: 734 LPPKKF 739
>gi|403415510|emb|CCM02210.1| predicted protein [Fibroporia radiculosa]
Length = 1363
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 140/234 (59%), Gaps = 21/234 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETT-------------KVIIFANYRVVVAEIFDVLKPL 143
H K +LR +L HF H E T +V++F ++R V E+ +VL
Sbjct: 573 HPKMEKLRILLIQHFANHMFDNEDTGRASGNSHPATQSRVMVFVSFRECVDEVVEVLNRE 632
Query: 144 EPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLV 197
EP++KA+ F+GQ + G+ Q+EQ E++KKF++GEFN L++TS+GEEGLDIGEID++
Sbjct: 633 EPLIKATRFIGQGTDKQGRKGIGQREQLEVIKKFKSGEFNVLVSTSIGEEGLDIGEIDMI 692
Query: 198 ICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSI 257
+C+DAQK+PI+M+QR+GRTGRK++G ILL +GRE N+ + K I+ + +
Sbjct: 693 VCYDAQKTPIRMLQRIGRTGRKKDGIVHILLAEGREERNWDKAQDKYKDVQHFIVRAEEL 752
Query: 258 YANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKK 311
L + PR++P H+ P + + ++ + +PS+K N + SK +
Sbjct: 753 --ELYGDTPRLLPDHIKPECTEMIMDIEAYIREDRPSRKGSIANGDDSPLSKAR 804
>gi|317139883|ref|XP_001817822.2| ATP-dependent DNA helicase mph1 [Aspergillus oryzae RIB40]
gi|189082536|sp|Q2URJ5.2|MPH1_ASPOR RecName: Full=ATP-dependent DNA helicase mph1
Length = 1129
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 175/312 (56%), Gaps = 31/312 (9%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLV------EVSKEDGSCPILGKDNDLQNLLQQLKP 82
F V SLA A++ L +G+ FY +L+ E K + +D + L+ L+P
Sbjct: 595 FTVLASLAHAIDLLKYHGITPFYRHLLHFQSNTEGQKGGKYQRQVVQDESFKKLINHLQP 654
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAE--KGE------TTKVIIFANYRVVVA 134
+ E+ H K L+ ++ +HF E GE +T+++IF ++R
Sbjct: 655 W----TKNPEFI-GHPKLEYLKSVVLNHFMDAGEGSNGEASDSQSSTRIMIFVHFRDSAE 709
Query: 135 EIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
E+ VLK EPM++ +FVGQSS G+ Q+ Q +I++KF+ G +NT++ATS+GEEGL
Sbjct: 710 EVTRVLKRYEPMIRPHVFVGQSSAKGSEGMGQKTQLDIVQKFKKGTYNTIVATSIGEEGL 769
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY-- 247
DIGE+DL++C+D+ SPI+M+QR+GRTGRKR G V+LL +G+E ++ ++ +Y
Sbjct: 770 DIGEVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLLLMEGKEEESY---IKAKDNYEK 826
Query: 248 VEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKK 307
++++I + S + PR++PA + P HI + D A+ S +PK +A K+
Sbjct: 827 MQQMIASGSRFTFHDDISPRILPAGIRPVADKRHIDIPDEN--AEQSLPEPKRRGRAPKR 884
Query: 308 SKKKLETDGNSE 319
KK N E
Sbjct: 885 PPKKFHMPDNVE 896
>gi|443700613|gb|ELT99493.1| hypothetical protein CAPTEDRAFT_222339 [Capitella teleta]
Length = 1565
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 175/303 (57%), Gaps = 30/303 (9%)
Query: 2 LAKDKYVKSKAQF-----PHINRDLDRMIQRDFHVTHSLASALENLVTYGLRS---FYNN 53
L+K ++K++ +F P +N I+ DF + SL E L +GLRS F +
Sbjct: 332 LSKFMFLKAREEFRQNPPPTLNPVNFGSIEGDFALGMSLYHGYELLQHHGLRSLHCFMQS 391
Query: 54 LVEVSKEDGSCPI-LGKDNDLQNLLQQLKPKLD-----------INIMSS---EYAWSHL 98
L+ K +G L ++ D L+Q+L K D + + +S E+ H
Sbjct: 392 LISGEKGNGRTRAELMRNQDFCQLMQELDAKFDPIKSAGPYLSQMTLNASQKKEFVAGHP 451
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS- 157
K +L E++ HF E+ + T+++IF+ YR V EI +L P+VKA F+GQSS
Sbjct: 452 KMSKLEEVVLEHFHSLEEQEQQTRIMIFSQYRDSVNEITQMLNQHRPLVKAMSFIGQSSA 511
Query: 158 -----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
G TQ+EQ ++M+ FR G +NTLI+T VGEEGLDIG++DL+ICFDA KSPI++VQR
Sbjct: 512 KKTSRGFTQKEQLKVMRAFREGGYNTLISTCVGEEGLDIGDVDLIICFDAHKSPIRLVQR 571
Query: 213 LGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAH 272
+GRTGRKR GR V+L+TQG+E + S+ KS + K I N + + PRM+P+
Sbjct: 572 MGRTGRKRRGRIVMLVTQGKEEQVYNQSLYNKKS-IHKAILNGARSLEFYQGNPRMVPSG 630
Query: 273 VTP 275
+TP
Sbjct: 631 LTP 633
>gi|238483465|ref|XP_002372971.1| DEAD box helicase Mph1, putative [Aspergillus flavus NRRL3357]
gi|220701021|gb|EED57359.1| DEAD box helicase Mph1, putative [Aspergillus flavus NRRL3357]
Length = 1129
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 175/312 (56%), Gaps = 31/312 (9%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLV------EVSKEDGSCPILGKDNDLQNLLQQLKP 82
F V SLA A++ L +G+ FY +L+ E K + +D + L+ L+P
Sbjct: 595 FTVLASLAHAIDLLKYHGITPFYRHLLHFQSNTEGQKGGKYQRQVVQDESFKKLINHLQP 654
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAE--KGE------TTKVIIFANYRVVVA 134
+ E+ H K L+ ++ +HF E GE +T+++IF ++R
Sbjct: 655 W----TKNPEFI-GHPKLEYLKSVVLNHFMDAGEGSNGEASDSQSSTRIMIFVHFRDSAE 709
Query: 135 EIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
E+ VLK EPM++ +FVGQSS G+ Q+ Q +I++KF+ G +NT++ATS+GEEGL
Sbjct: 710 EVTRVLKRYEPMIRPHVFVGQSSAKGSEGMGQKTQLDIVQKFKKGTYNTIVATSIGEEGL 769
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY-- 247
DIGE+DL++C+D+ SPI+M+QR+GRTGRKR G V+LL +G+E ++ ++ +Y
Sbjct: 770 DIGEVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLLLMEGKEEESY---IKAKDNYEK 826
Query: 248 VEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKK 307
++++I + S + PR++PA + P HI + D A+ S +PK +A K+
Sbjct: 827 MQQMIASGSRFTFHDDISPRILPAGIRPVADKRHIDIPDEN--AEQSLPEPKRRGRAPKR 884
Query: 308 SKKKLETDGNSE 319
KK N E
Sbjct: 885 PPKKFHMPDNVE 896
>gi|380489822|emb|CCF36443.1| type III restriction enzyme, partial [Colletotrichum higginsianum]
Length = 1024
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 165/303 (54%), Gaps = 24/303 (7%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGK--------DNDLQN 75
M++ F + SLA A++ L +G+R FY NL E E G D Q
Sbjct: 381 MMRAIFSILQSLAHAIKLLNFHGIRPFYENLKEFRSETEDRGDKGSKYKKQIVNDKSFQE 440
Query: 76 LLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGET-TKVIIFANYRVVVA 134
++ +++ + +E H K L++ + +HF + G+T T++I+F+ YR
Sbjct: 441 MMTKVE-----KWLRTEGFVGHPKLAALQDTVLNHF---MDAGQTSTRIIVFSEYRDSAE 492
Query: 135 EIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
+I VL +P++KA++FVGQ S+G+ Q EQ ++KF+ GE+N L+ATS+GEEGL
Sbjct: 493 DIVRVLNVHKPLIKATVFVGQADSKRSAGMKQSEQIATIQKFKDGEYNVLVATSIGEEGL 552
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVE 249
DIG++DL++C+DA SPI+M+QR+GRTGRKR G V+LL +G+E F S + ++
Sbjct: 553 DIGQVDLIVCYDASSSPIRMLQRMGRTGRKRAGNIVLLLMRGKEEDAFARSKDNY-AEMQ 611
Query: 250 KIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSK 309
K+I S + R++P + P + HI + T PS +PK K
Sbjct: 612 KLICEGSKFNFRHDLSTRIVPRDIRPEVVMQHIEIPIENT-QNPSLPEPKRGRARKKLPP 670
Query: 310 KKL 312
KK
Sbjct: 671 KKF 673
>gi|195436432|ref|XP_002066172.1| GK22219 [Drosophila willistoni]
gi|194162257|gb|EDW77158.1| GK22219 [Drosophila willistoni]
Length = 1284
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 198/398 (49%), Gaps = 45/398 (11%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPK 83
+I +F + SL +LE L +GLR F NN +V + +L KD DL+NL+ +L+
Sbjct: 335 LIAGNFSMCISLYHSLELLERHGLRVFVNNF-DVDADGRDKYVLTKDADLRNLVDELRKD 393
Query: 84 LDIN---------------IMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFAN 128
L N M + + H K+ +R++L +HF H++ ++ I+F
Sbjct: 394 LGPNPLDISTKAMTNGQVAAMPTALDFGHPKYEEVRKVLVNHFESHSD----SRAIVFCE 449
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIAT 182
YR V I +L P+++ FVGQ + Q++Q IM FRAG N L+AT
Sbjct: 450 YRESVMLIQRLLLQHRPLLRPRCFVGQGGSNGGFYALAQKQQLAIMADFRAGTSNILVAT 509
Query: 183 SVGEEGLDIGEIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
S+GEEG+D+GE+++++CFD +P + VQR+GRTGRK+NG V+L T+GRE + +
Sbjct: 510 SIGEEGIDVGEVEMIVCFDICSSNPTRFVQRIGRTGRKKNGEVVMLATEGREQQMLKDVL 569
Query: 242 QTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKEN 301
+ K++N+ + +L + PRMIP + P KC +K P P K
Sbjct: 570 ANREQTNRKMLNSSVVMRSLYELNPRMIPQQLHP--KCEEQFMK----PPDPEPKTVVSP 623
Query: 302 EKANKKSKKKLETDGNSEPAGKQNKTNAKK---TKKQPMMTQSNDIRTCF--ENITKKKK 356
A K++ K G+ KQ ++ ++ +QP Q ++ C E IT++
Sbjct: 624 PAAKKRNSVK---SGDLRKFFKQTSSSTQEDMLIGQQPY--QMSEASQCLIKEQITRRSI 678
Query: 357 TFIDFL--TQSSGEPVSAMDDEVVIVQNKIKPMQRKRK 392
+FL TQS+ P S + N + + R RK
Sbjct: 679 AVKNFLLDTQSASTPDSTPASVSAPISNSQEDISRLRK 716
>gi|391870973|gb|EIT80142.1| DEAD-box like helicase [Aspergillus oryzae 3.042]
Length = 995
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 175/312 (56%), Gaps = 31/312 (9%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLV------EVSKEDGSCPILGKDNDLQNLLQQLKP 82
F V SLA A++ L +G+ FY +L+ E K + +D + L+ L+P
Sbjct: 461 FTVLASLAHAIDLLKYHGITPFYRHLLHFQSNTEGQKGGKYQRQVVQDESFKKLINHLQP 520
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAE--KGE------TTKVIIFANYRVVVA 134
+ E+ H K L+ ++ +HF E GE +T+++IF ++R
Sbjct: 521 W----TKNPEFI-GHPKLEYLKSVVLNHFMDAGEGSNGEASDSQSSTRIMIFVHFRDSAE 575
Query: 135 EIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
E+ VLK EPM++ +FVGQSS G+ Q+ Q +I++KF+ G +NT++ATS+GEEGL
Sbjct: 576 EVTRVLKRYEPMIRPHVFVGQSSAKGSEGMGQKTQLDIVQKFKKGTYNTIVATSIGEEGL 635
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY-- 247
DIGE+DL++C+D+ SPI+M+QR+GRTGRKR G V+LL +G+E ++ ++ +Y
Sbjct: 636 DIGEVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLLLMEGKEEESY---IKAKDNYEK 692
Query: 248 VEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKK 307
++++I + S + PR++PA + P HI + D A+ S +PK +A K+
Sbjct: 693 MQQMIASGSRFTFHDDISPRILPAGIRPVADKRHIDIPDEN--AEQSLPEPKRRGRAPKR 750
Query: 308 SKKKLETDGNSE 319
KK N E
Sbjct: 751 PPKKFHMPDNVE 762
>gi|367020256|ref|XP_003659413.1| hypothetical protein MYCTH_2296412 [Myceliophthora thermophila ATCC
42464]
gi|347006680|gb|AEO54168.1| hypothetical protein MYCTH_2296412 [Myceliophthora thermophila ATCC
42464]
Length = 1105
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 175/314 (55%), Gaps = 28/314 (8%)
Query: 16 HINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGK------ 69
H+N+ M+ F + SLA ++ L +G++ FYN L E + + P G
Sbjct: 427 HVNQGTKFMMVAVFSILQSLAHLIKLLNFHGIKPFYNGLAEFRASEEAKPGQGSKIKRQL 486
Query: 70 --DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
D + Q ++ ++ + ++ + H K L E L +HF + A +G T+ I+F+
Sbjct: 487 LADENFQKMMSMIERWMRLDEFNG-----HPKLTYLCERLVNHF-MDAGEGANTRAIVFS 540
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIAT 182
YR EI +L +P+++A++FVGQ S G+ Q++Q E ++KF+ G FN L+AT
Sbjct: 541 EYRDSAEEIVRLLN-TQPLLRATVFVGQADSKRSEGMKQKQQIETIEKFKKGVFNVLVAT 599
Query: 183 SVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQ 242
S+GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G V+LL +G+E F ++
Sbjct: 600 SIGEEGLDIGQVDLIVCYDASSSPIRMLQRMGRTGRKRAGNIVLLLMKGKEEEKF---LE 656
Query: 243 TCKSY--VEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKKP 298
+Y ++++I N + R++P + P + + + I +++ P+ P KK
Sbjct: 657 AKDNYQKMQQLICNGDSFTFRHDLSTRILPREIRPEVDKRLVDIPLENSQDPSLPEPKK- 715
Query: 299 KENEKANKKSKKKL 312
E K +K+K
Sbjct: 716 TAAELRKKPAKRKF 729
>gi|378728821|gb|EHY55280.1| fanconi anemia group M protein [Exophiala dermatitidis NIH/UT8656]
Length = 1143
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 176/306 (57%), Gaps = 30/306 (9%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNL-----LQQ 79
+Q F V SLA LE L +G+ FY+ + + E GK + + Q+
Sbjct: 525 MQGIFAVLMSLAHNLELLKYHGIGPFYHKMKAFADEAAG----GKGKYAKQVANNENFQK 580
Query: 80 LKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE----------TTKVIIFANY 129
L +L I + E+ H K L+ ++ +HF + A +G+ +T++++FA+Y
Sbjct: 581 LMNRLRIWVNDPEFV-GHPKLAYLKTVVLNHF-MDAGEGQQGSGNVTQRPSTRIMVFAHY 638
Query: 130 RVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSV 184
R EI VL P+++A +FVGQS G+ Q+ Q ++++KF+AG +NT++ATS+
Sbjct: 639 RDSAEEIVRVLNRHGPLIRARVFVGQSGTKGSEGMDQKTQMDVIQKFKAGTYNTIVATSI 698
Query: 185 GEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTC 244
GEEGLDIGE+DL++C+D KSPI+M+QR+GRTGRKR G+ V+LL +G+E ++ +
Sbjct: 699 GEEGLDIGEVDLIVCYDCSKSPIRMLQRMGRTGRKRAGKIVLLLMKGKEESDYYQAKDNY 758
Query: 245 KSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKD-RVTPAKPSKKKPKEN 301
+ KI + K + + PR++P + P + + + I +++ + P +P++++ K
Sbjct: 759 QKMQAKIESGKE-FDFREEESPRIVPKDINPVVDKRVVEIPIENTQNAPLEPTRRRAKNL 817
Query: 302 EKANKK 307
+K KK
Sbjct: 818 KKPAKK 823
>gi|83765677|dbj|BAE55820.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 853
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 173/310 (55%), Gaps = 27/310 (8%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLV------EVSKEDGSCPILGKDNDLQNLLQQLKP 82
F V SLA A++ L +G+ FY +L+ E K + +D + L+ L+P
Sbjct: 319 FTVLASLAHAIDLLKYHGITPFYRHLLHFQSNTEGQKGGKYQRQVVQDESFKKLINHLQP 378
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAE--KGE------TTKVIIFANYRVVVA 134
+ E+ H K L+ ++ +HF E GE +T+++IF ++R
Sbjct: 379 WTK----NPEFI-GHPKLEYLKSVVLNHFMDAGEGSNGEASDSQSSTRIMIFVHFRDSAE 433
Query: 135 EIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
E+ VLK EPM++ +FVGQSS G+ Q+ Q +I++KF+ G +NT++ATS+GEEGL
Sbjct: 434 EVTRVLKRYEPMIRPHVFVGQSSAKGSEGMGQKTQLDIVQKFKKGTYNTIVATSIGEEGL 493
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVE 249
DIGE+DL++C+D+ SPI+M+QR+GRTGRKR G V+LL +G+E ++ + + ++
Sbjct: 494 DIGEVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLLLMEGKEEESYIKAKDNYEK-MQ 552
Query: 250 KIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSK 309
++I + S + PR++PA + P HI + D A+ S +PK +A K+
Sbjct: 553 QMIASGSRFTFHDDISPRILPAGIRPVADKRHIDIPDEN--AEQSLPEPKRRGRAPKRPP 610
Query: 310 KKLETDGNSE 319
KK N E
Sbjct: 611 KKFHMPDNVE 620
>gi|154280200|ref|XP_001540913.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412856|gb|EDN08243.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 999
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 167/296 (56%), Gaps = 28/296 (9%)
Query: 2 LAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKED 61
+A+ ++KS A + N L M+ F V SLA A++ L +G+ FY NLV
Sbjct: 428 VARKDWLKSPAGR-NANNGLKGMVHAIFSVLSSLAHAIDLLKYHGIGPFYRNLVSFQSTL 486
Query: 62 GSCPI-----LGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAE 116
G+ + D + + L+ +L+ ++E H K L+ ++ +HF + AE
Sbjct: 487 GAGGSKYQRQIVDDGNFKTLMNRLR-----MWTNNEDFIGHPKLEFLKRVVLNHF-MDAE 540
Query: 117 KG----------ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQ 161
K T++++FA++R EI VLK PM++ +FVGQ S G+ Q
Sbjct: 541 KDGDDSIGNRHPSGTRIMVFAHFRDSAEEIVRVLKRHGPMIRPHVFVGQAAAKGSGGMDQ 600
Query: 162 QEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN 221
+ Q EI++KF+ G +NT++ATSVGEEGLDIGE+DL++C+D+ SPI+M+QR+GRTGRKR
Sbjct: 601 KTQLEIIEKFKEGTYNTIVATSVGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRR 660
Query: 222 GRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
G V+LL +G+E +F T + ++++I + + + PR++P + P +
Sbjct: 661 GNIVLLLMKGKEEDSF-TKAKDNYEKMQRMIASGARFTFHDDKSPRILPRDIHPAV 715
>gi|340914608|gb|EGS17949.1| ATP-dependent DNA helicase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 1200
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 158/282 (56%), Gaps = 21/282 (7%)
Query: 16 HINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGK------ 69
H N+ L MI F + S+A +++ L +G++ FY + E + + G
Sbjct: 481 HANQGLKFMIMSVFGILQSVAHSIKLLNFHGIKPFYYAMAEFRSTEEAKGERGSKLKRQL 540
Query: 70 --DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
D Q ++ ++ + + H K L ++L +HF A +G T+ I+FA
Sbjct: 541 LNDESFQKMMTMIEKWMKLKDFHG-----HPKLTYLCQVLVNHF-ADAGEGSNTRAIVFA 594
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIAT 182
YR EI +L +PMV A++FVGQ S G+ Q++Q E ++KF++G+FN L+AT
Sbjct: 595 EYRDSAEEIVRLLN-TQPMVSATVFVGQADSKRSEGMKQKQQIETIEKFKSGQFNVLVAT 653
Query: 183 SVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQ 242
S+GEEGLDIG++DL+IC+DA SPI+M+QR+GRTGRKR G V+LL +G+E F +
Sbjct: 654 SIGEEGLDIGQVDLIICYDASSSPIRMLQRMGRTGRKRAGNIVLLLMKGKEEEKFAEAKD 713
Query: 243 TCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVV 284
+ ++++I + + + + R+IP + P + HI +
Sbjct: 714 NYQK-MQQLICDGASFTFRHELSARIIPRDIKPEVDKRHIDI 754
>gi|325092865|gb|EGC46175.1| helicase C-terminal domain-containing protein [Ajellomyces
capsulatus H88]
Length = 1142
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 168/296 (56%), Gaps = 28/296 (9%)
Query: 2 LAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKED 61
+A+ ++KS A + N L M+ F V SLA A++ L +G+ FY NLV
Sbjct: 570 VARKDWLKSPAGR-NANNGLKGMVHAIFSVLSSLAHAIDLLKYHGIGPFYRNLVSFQNAL 628
Query: 62 GSCPI-----LGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAE 116
G+ + D + + L+ +LK ++E H K L+ ++ +HF + AE
Sbjct: 629 GAGGSKYQRQIVDDENFKTLMNRLK-----MWTNNEDFIGHPKLEFLKRVVLNHF-MDAE 682
Query: 117 KG----------ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQ 161
K +T++++FA++R EI VLK PM++ +FVGQ S G+ Q
Sbjct: 683 KDGDDSLANRHRSSTRIMVFAHFRDSAEEIVRVLKRHGPMIRPHVFVGQAAAKGSGGMDQ 742
Query: 162 QEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN 221
+ Q +I++KF+ G +NT++ATSVGEEGLDIGE+DL++C+D+ SPI+M+QR+GRTGRKR
Sbjct: 743 KTQLDIIEKFKEGTYNTIVATSVGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRR 802
Query: 222 GRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
G V+LL +G+E +F T + ++++I + + + PR++P + P +
Sbjct: 803 GNIVLLLMKGKEEDSF-TKAKDNYEKMQQMIASGARFTFHDDKSPRILPRDIHPTV 857
>gi|226287424|gb|EEH42937.1| helicase C-terminal domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 1139
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 168/309 (54%), Gaps = 35/309 (11%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV---SKEDGSCPILGKDNDLQNLLQQL 80
MI F V SLA A++ L +G+ FY NL+ S E G + D N
Sbjct: 591 MINAIFTVLASLAHAIDLLKYHGIGPFYRNLISFQSSSSEAGGAKYRRQVADCDNF---- 646
Query: 81 KPKLDINIMSSEYAWS-------HLKFIRLREILESHF--------RLHAEKGETTKVII 125
K+ +M+ AW+ H K L++++ +HF E T++++
Sbjct: 647 --KI---LMARMRAWTNNADFIGHPKLEYLKQVVLNHFMDAGDGAAGATGENPSDTRIMV 701
Query: 126 FANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLI 180
FA++R EI VLK EPM++ +FVGQ S G+ Q+ Q +I++KF+ G +NT++
Sbjct: 702 FAHFRDSAEEIVRVLKRHEPMIRPHVFVGQAAAKGSEGMDQKTQLDIIEKFKKGTYNTIV 761
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
ATS+GEEGLDIGEIDL++C+D+ SPI+M+QR+GRTGRKR G V+LL +G+E ++ +
Sbjct: 762 ATSIGEEGLDIGEIDLIVCYDSSASPIRMLQRMGRTGRKRRGNIVLLLMKGKEEDSYIKA 821
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKKP 298
+ + I + + K+ PR++P + P + K + I V++ T K+P
Sbjct: 822 KDNYQKMQQMIASGTRFMFHYDKS-PRILPRDIQPSVVEKRIDIPVENSTTDLPEPSKRP 880
Query: 299 KENEKANKK 307
+ ++ KK
Sbjct: 881 RVPKRPPKK 889
>gi|449504631|ref|XP_002200489.2| PREDICTED: Fanconi anemia group M protein [Taeniopygia guttata]
Length = 1594
Score = 167 bits (423), Expect = 8e-39, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 196/349 (56%), Gaps = 46/349 (13%)
Query: 1 MLAKDKYVKS-KAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSK 59
+LA+D+Y K+ AQ I++ + I+ DF + SL E L+ G+RS + L +
Sbjct: 308 ILARDQYRKNPSAQNAGIHQGI---IEGDFALCISLYHGYELLLQMGIRSLFIYLWGIM- 363
Query: 60 EDGSCPI------LGKDNDLQNLLQQLKPKLDINIMS----------------SEYAWSH 97
DGS + LG++ D L QQL+ ++ E+ +SH
Sbjct: 364 -DGSKGLSRTKGELGRNEDFMELYQQLQDMFSDTAVTPESGGVCKSTTALEKKKEFVYSH 422
Query: 98 LKFIRLREILESHFRLHAEKGET---------TKVIIFANYRVVVAEIFDVLKPLEPMVK 148
K +L EI+ HFR ++ + T+V+IF+++R V EI ++L L P V+
Sbjct: 423 PKLKKLEEIVIEHFRSWKQRSDEEKSAGSAGDTRVMIFSSFRDSVQEIAEMLARLSPAVR 482
Query: 149 ASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQ 203
A FVG SSG TQ+EQ E++++FR G +NTL++T VGEEGLDIGE+DL++CFDAQ
Sbjct: 483 AMTFVGHSSGKSTKGFTQKEQLEVVRRFREGGYNTLVSTCVGEEGLDIGEVDLIVCFDAQ 542
Query: 204 KSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAK 263
+SP+++VQR+GRTGR+R+GR V++L QGRE N+ S +S + I NK++ +
Sbjct: 543 RSPVRLVQRMGRTGRRRHGRIVVILAQGREERNYNQSQCNKRSIHKAISGNKTL--RFYQ 600
Query: 264 NGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKKL 312
+ PRM+P +TP++ + I + + S+ KE ++ + K L
Sbjct: 601 HSPRMVPEGITPKVHKMFITAEKQ--EQSTSRMLSKERRSSSLQHKSAL 647
>gi|225677838|gb|EEH16122.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 1094
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 168/309 (54%), Gaps = 35/309 (11%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV---SKEDGSCPILGKDNDLQNLLQQL 80
MI F V SLA A++ L +G+ FY NL+ S E G + D N
Sbjct: 546 MINAIFTVLASLAHAIDLLKYHGIGPFYRNLISFQSSSSEAGGAKYRRQVADCDNF---- 601
Query: 81 KPKLDINIMSSEYAWS-------HLKFIRLREILESHF--------RLHAEKGETTKVII 125
K+ +M+ AW+ H K L++++ +HF E T++++
Sbjct: 602 --KI---LMARMRAWTNNADFIGHPKLEYLKQVVLNHFMDAGDGAAGATGENPSDTRIMV 656
Query: 126 FANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLI 180
FA++R EI VLK EPM++ +FVGQ S G+ Q+ Q +I++KF+ G +NT++
Sbjct: 657 FAHFRDSAEEIVRVLKRHEPMIRPHVFVGQAAAKGSEGMDQKTQLDIIEKFKKGTYNTIV 716
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
ATS+GEEGLDIGEIDL++C+D+ SPI+M+QR+GRTGRKR G V+LL +G+E ++ +
Sbjct: 717 ATSIGEEGLDIGEIDLIVCYDSSASPIRMLQRMGRTGRKRRGNIVLLLMKGKEEDSYIKA 776
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKKP 298
+ + I + + K+ PR++P + P + K + I V++ T K+P
Sbjct: 777 KDNYQKMQQMIASGTRFMFHYDKS-PRILPRDIQPSVVEKRIDIPVENSTTDLPEPSKRP 835
Query: 299 KENEKANKK 307
+ ++ KK
Sbjct: 836 RVPKRPPKK 844
>gi|326921331|ref|XP_003206914.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein-like
[Meleagris gallopavo]
Length = 1864
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 178/315 (56%), Gaps = 36/315 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D+Y K+ + P +I+ DF + SL E L G RS + L +
Sbjct: 310 ILARDQYRKNPS--PQNVGMQQGVIEGDFALCISLYHGYELLQQMGARSLFIYLCGIM-- 365
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL----------DINIMSS---EYAWSHLKFI 101
DGS + LG++ D L QQL +++ MS E+ +SH K
Sbjct: 366 DGSKGLTRTKNELGRNEDFMRLYQQLTDMFSDVCQTSANGNLHKMSENKKEFIYSHPKLK 425
Query: 102 RLREILESHFR---LHAEKGET---TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ 155
+L EI+ HF+ G T T+V+IF+++R V EI ++L P+V+ FVG
Sbjct: 426 KLEEIVTEHFKSRGYQTTSGSTSVDTRVMIFSSFRDSVQEIAEMLSRFSPVVRVMTFVGH 485
Query: 156 SSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
S+G TQ+EQ E++K+FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++V
Sbjct: 486 STGKSTKGFTQKEQLEVVKRFREGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLV 545
Query: 211 QRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIP 270
QR+GRTGR+R GR V++LT+GRE + S ++ + I NK ++ ++ PRMIP
Sbjct: 546 QRMGRTGRQRRGRVVVILTEGREERTYNQSHSNKRNIQKAISGNKMLH--FYQHSPRMIP 603
Query: 271 AHVTPRIKCLHIVVK 285
+ P + + I +
Sbjct: 604 EGINPELHRMFITAE 618
>gi|342879845|gb|EGU81079.1| hypothetical protein FOXB_08427 [Fusarium oxysporum Fo5176]
Length = 1091
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 178/316 (56%), Gaps = 27/316 (8%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV-SK 59
M ++ ++ S+ + H N+ + M++ F V S+A +++ L +G++ FY+NLV++ S+
Sbjct: 398 MQSQREWFASRGR--HANQGVQHMMRAVFSVLTSIAHSIKLLNFHGIKPFYDNLVDLRSE 455
Query: 60 EDGSCP-------ILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFR 112
++G L +D++ Q ++ ++ + +E H K L + + +HF
Sbjct: 456 QEGRGEKGSKYKRQLIQDSNFQEMMDKIS-----KWLRTEGFVGHPKLTALADTVLNHF- 509
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEI 167
+ T+VI+F+ YR +I +L +P++KAS+FVGQ+ G + Q +Q E
Sbjct: 510 MDQSDNSATRVIVFSEYRDSAEDIVRMLNKHQPLIKASVFVGQADGKRGEGMKQAQQIEA 569
Query: 168 MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
+ +F+ G+FN L+ATS+GEEGLDIG++DL++C+D+ SPI+M+QR+GRTGRKR G V+L
Sbjct: 570 INRFKKGDFNVLVATSIGEEGLDIGQVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLL 629
Query: 228 LTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVV--- 284
L +G+E F S + ++ +I S + R++P V P + H+ +
Sbjct: 630 LMRGKEEDQFAKSKDNYEK-MQTLICEGSRFNFRFDLSTRIVPRGVVPEVDKRHVDIPVE 688
Query: 285 --KDRVTPAKPSKKKP 298
+D+ P ++ P
Sbjct: 689 NTQDQSLPEPKKRRAP 704
>gi|380028688|ref|XP_003698023.1| PREDICTED: Fanconi anemia group M protein-like [Apis florea]
Length = 1099
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 174/299 (58%), Gaps = 19/299 (6%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKL 84
I + ++ ++ A E +V GLR+FY + + + ++ LQ LL+ +K L
Sbjct: 296 IIKTLNILMTMYHAYELMVRDGLRAFY----KFYQNHSDKFWMNEEPQLQILLEDVKAYL 351
Query: 85 ----DINIMSSE--------YAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVV 132
D + E + H KF +L+E+L HF+ + +K T+ I+F YR +
Sbjct: 352 GPFPDTKDLCEEIIMEIPQNLIFGHTKFDKLKELLICHFKNNQKKENNTRAIVFVEYRDI 411
Query: 133 VAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIG 192
V+EI+ +L +P+++ MFVGQ+ +Q+ K ++ F+ N LI+TS+GEEGLD+G
Sbjct: 412 VSEIYILLLQCQPLIRPQMFVGQAGQKQKQQIKA-LEDFKNNYVNVLISTSIGEEGLDVG 470
Query: 193 EIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKI 251
E+DL+ICFD +Q SP ++VQR+GRTGRKR+G +IL+T G+E ++++ S K+
Sbjct: 471 EVDLIICFDVSQHSPTRLVQRMGRTGRKRDGHIIILVTDGKEHETLKSTIARRDSLNYKV 530
Query: 252 INNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKK 310
+N +I+++L +N PRMIP + P +HI ++ + TP KK+ K + N SKK
Sbjct: 531 LNTNNIFSSLYQNNPRMIPDILIPECLKMHISIQPK-TPVIKYKKQKKRKNETNLVSKK 588
>gi|225562910|gb|EEH11189.1| helicase C-terminal domain-containing protein [Ajellomyces
capsulatus G186AR]
Length = 1142
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 168/296 (56%), Gaps = 28/296 (9%)
Query: 2 LAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKED 61
+A+ ++KS A + N L M+ F V SLA A++ L +G+ FY NLV
Sbjct: 570 VARKDWLKSPAGR-NANNGLKGMVHAIFSVLSSLAHAIDLLKYHGIGPFYRNLVSFQNAL 628
Query: 62 GSCPI-----LGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAE 116
G+ + D + + L+ +L+ ++E H K L+ ++ +HF + AE
Sbjct: 629 GAGGSKYQRQIVDDENFKTLMHRLR-----MWTNNEDFIGHPKLEFLKRVVLNHF-MDAE 682
Query: 117 KG----------ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQ 161
K +T++++FA++R EI VLK PM++ +FVGQ S G+ Q
Sbjct: 683 KDGDDSLANRHPSSTRIMVFAHFRDSAEEIVRVLKRHGPMIRPHVFVGQAAAKGSGGMDQ 742
Query: 162 QEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN 221
+ Q +I++KF+ G +NT++ATSVGEEGLDIGE+DL++C+D+ SPI+M+QR+GRTGRKR
Sbjct: 743 KTQLDIIEKFKEGTYNTIVATSVGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRR 802
Query: 222 GRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
G V+LL +G+E +F T + ++++I + + + PR++P + P +
Sbjct: 803 GNIVLLLMKGKEEDSF-TKAKDNYEKMQQMIASGARFTFHDDKSPRILPRDIHPAV 857
>gi|302926399|ref|XP_003054288.1| hypothetical protein NECHADRAFT_31148 [Nectria haematococca mpVI
77-13-4]
gi|256735229|gb|EEU48575.1| hypothetical protein NECHADRAFT_31148 [Nectria haematococca mpVI
77-13-4]
Length = 1071
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 170/295 (57%), Gaps = 22/295 (7%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV-SK 59
M ++ ++ S+ + H N+ + M++ F V S+A +++ L +G++ FY+NLV++ S+
Sbjct: 377 MQSQKEWFASRGR--HANQGVQHMMRAVFSVLTSIAHSIKLLNFHGIKPFYDNLVDLRSE 434
Query: 60 EDGSCP-------ILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFR 112
++G L +D++ Q ++ ++ + ++ H K L + + +HF
Sbjct: 435 QEGKGEKGSKYKRQLIQDSNFQEMMDKIS-----KWLRTDGFVGHPKLTALADTVLNHFM 489
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEI 167
E G T+VI+F+ YR +I +L P++KAS+FVGQ+ G + Q +Q
Sbjct: 490 DKGE-GSATRVIVFSEYRDSAEDIVRMLNTHRPLIKASVFVGQADGKRGEGMKQAQQIAA 548
Query: 168 MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
+++F+ GEFN L+ATS+GEEGLDIG++DL++C+D+ SPI+M+QR+GRTGRKR G V+L
Sbjct: 549 IERFKRGEFNVLVATSIGEEGLDIGQVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLL 608
Query: 228 LTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHI 282
L +G+E F S + ++ +I S + R++P + P + H+
Sbjct: 609 LMRGKEEDQFAKSKDNYEK-MQTLICEGSRFNFRFDLSTRIVPRAIRPEVDKRHV 662
>gi|350419133|ref|XP_003492081.1| PREDICTED: hypothetical protein LOC100743989 [Bombus impatiens]
Length = 1330
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 128/191 (67%), Gaps = 4/191 (2%)
Query: 95 WSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+ H KF +L+E+L HF+ EK T+ I+F YR +V+E++ +L P+++ MFVG
Sbjct: 371 FGHTKFDKLKELLLRHFKRSEEKQSDTRAIVFVEYRDIVSEVYILLLQCRPLIRPQMFVG 430
Query: 155 QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFD-AQKSPIKMVQRL 213
Q+ +Q+ K ++ FR N LI+TS+GEEGLD+GE+DL+ICFD +Q SP ++VQR+
Sbjct: 431 QAGQKQKQQIKA-LENFRNNHVNVLISTSIGEEGLDVGEVDLIICFDVSQHSPTRLVQRM 489
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G +IL+T G+E +++M S KI+N +I+++L +N PRMIP
Sbjct: 490 GRTGRKRDGHIIILVTDGKEHETLKSTMARRDSLNYKILNTSNIFSSLYQNNPRMIPDVF 549
Query: 274 TPRIKCLHIVV 284
TP +CL + +
Sbjct: 550 TP--ECLRMQI 558
>gi|336464546|gb|EGO52786.1| hypothetical protein NEUTE1DRAFT_114701 [Neurospora tetrasperma
FGSC 2508]
Length = 1168
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 178/331 (53%), Gaps = 25/331 (7%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV--- 57
M A++ ++ + H+N+ + F + SLA +++ L +G++ FYNNL E
Sbjct: 399 MKARNDWMAGPGR--HVNQGTKFSVIATFAILQSLAHSIKLLNFHGIKPFYNNLAEFRTT 456
Query: 58 -SKEDGSCPILGK----DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFR 112
++ G L + D + Q ++ ++ + I+ H K L E L +HF
Sbjct: 457 EEEKGGKGSKLKRQVLEDENFQKMMDMIEGWMKIDGF-----LGHPKLEYLCETLVNHF- 510
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEI 167
+ A +G T+ I+F+ YR EI +L +P++KA++FVGQ S G+ Q++Q E
Sbjct: 511 MDAGEGSNTRAIVFSEYRDSAEEIVRILNK-QPLIKATVFVGQADSKRSEGMKQKQQIET 569
Query: 168 MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
++KF+ G N L+ATS+GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G V+L
Sbjct: 570 IEKFKNGAHNVLVATSIGEEGLDIGQVDLIVCYDASASPIRMLQRMGRTGRKRAGNIVLL 629
Query: 228 LTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVK 285
L +G+E F + + ++++I S + R++P + P + K + I ++
Sbjct: 630 LMKGKEEDKFNEAKDNYAT-MQRMICEGSRFTFRHDLSSRIVPRDIRPEVEKKVVEIPLE 688
Query: 286 DRVTPAKPSKKKPKENEKANKKSKKKLETDG 316
+ P P K+ + KK DG
Sbjct: 689 NSQNPELPEPKRSAARMRTKPAKKKFNMPDG 719
>gi|85111617|ref|XP_964022.1| hypothetical protein NCU09318 [Neurospora crassa OR74A]
gi|74629001|sp|Q7SDF3.1|MPH1_NEUCR RecName: Full=ATP-dependent DNA helicase mph-1
gi|28925781|gb|EAA34786.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1168
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 179/327 (54%), Gaps = 26/327 (7%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV--- 57
M A++ ++ + H+N+ + F + SLA +++ L +G++ FYNNL E
Sbjct: 399 MKARNDWMAGPGR--HVNQGTKFSVIATFAILQSLAHSIKLLNFHGIKPFYNNLAEFRTT 456
Query: 58 -SKEDGSCPILGK----DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFR 112
++ G L + D + Q ++ ++ + I+ H K L E L +HF
Sbjct: 457 EEEKGGKGSKLKRQVLEDENFQKMMDMIEGWMKIDGF-----LGHPKLEYLCETLVNHF- 510
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEI 167
+ A +G T+ I+F+ YR EI +L +P++KA++FVGQ S G+ Q++Q E
Sbjct: 511 MDAGEGSNTRAIVFSEYRDSAEEIVRILNK-QPLIKATVFVGQADSKRSEGMKQKQQIET 569
Query: 168 MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
++KF+ G N L+ATS+GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G V+L
Sbjct: 570 IEKFKNGAHNVLVATSIGEEGLDIGQVDLIVCYDASASPIRMLQRMGRTGRKRAGNIVLL 629
Query: 228 LTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVK 285
L +G+E F + + ++++I S + R++P + P + K + I ++
Sbjct: 630 LMKGKEEDKFNEAKDNYAT-MQRMICEGSRFTFRHDLSSRIVPRDIRPEVEKKVVEIPLE 688
Query: 286 DRVTPAKPSKKKPKENEKANKKSKKKL 312
+ P P K+ + K +KKK
Sbjct: 689 NSQNPELPEPKRSAARMR-TKPAKKKF 714
>gi|350296637|gb|EGZ77614.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 1168
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 178/331 (53%), Gaps = 25/331 (7%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV--- 57
M A++ ++ + H+N+ + F + SLA +++ L +G++ FYNNL E
Sbjct: 399 MKARNDWMAGPGR--HVNQGTKFSVIATFAILQSLAHSIKLLNFHGIKPFYNNLAEFRTT 456
Query: 58 -SKEDGSCPILGK----DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFR 112
++ G L + D + Q ++ ++ + I+ H K L E L +HF
Sbjct: 457 EEEKGGKGSKLKRQVLEDENFQKMMDMIEGWMKIDGF-----LGHPKLEYLCETLVNHF- 510
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEI 167
+ A +G T+ I+F+ YR EI +L +P++KA++FVGQ S G+ Q++Q E
Sbjct: 511 MDAGEGSNTRAIVFSEYRDSAEEIVRILNK-QPLIKATVFVGQADSKRSEGMKQKQQIET 569
Query: 168 MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
++KF+ G N L+ATS+GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G V+L
Sbjct: 570 IEKFKNGAHNVLVATSIGEEGLDIGQVDLIVCYDASASPIRMLQRMGRTGRKRAGNIVLL 629
Query: 228 LTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVK 285
L +G+E F + + ++++I S + R++P + P + K + I ++
Sbjct: 630 LMKGKEEDKFNEAKDNYAT-MQRMICEGSRFTFRHDLSSRIVPRDIRPEVEKKVVEIPLE 688
Query: 286 DRVTPAKPSKKKPKENEKANKKSKKKLETDG 316
+ P P K+ + KK DG
Sbjct: 689 NSQNPDLPEPKRSAARMRTKPAKKKFNMPDG 719
>gi|240279736|gb|EER43241.1| helicase C-terminal domain-containing protein [Ajellomyces
capsulatus H143]
Length = 1055
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 168/296 (56%), Gaps = 28/296 (9%)
Query: 2 LAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKED 61
+A+ ++KS A + N L M+ F V SLA A++ L +G+ FY NLV
Sbjct: 503 VARKDWLKSPAGR-NANNGLKGMVHAIFSVLSSLAHAIDLLKYHGIGPFYRNLVSFQNAL 561
Query: 62 GSCPI-----LGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAE 116
G+ + D + + L+ +L+ ++E H K L+ ++ +HF + AE
Sbjct: 562 GAGGSKYQRQIVDDENFKTLMNRLR-----MWTNNEDFIGHPKLEFLKRVVLNHF-MDAE 615
Query: 117 KG----------ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQ 161
K +T++++FA++R EI VLK PM++ +FVGQ S G+ Q
Sbjct: 616 KDGDDSLANRHRSSTRIMVFAHFRDSAEEIVRVLKRHGPMIRPHVFVGQAAAKGSGGMDQ 675
Query: 162 QEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN 221
+ Q +I++KF+ G +NT++ATSVGEEGLDIGE+DL++C+D+ SPI+M+QR+GRTGRKR
Sbjct: 676 KTQLDIIEKFKEGTYNTIVATSVGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRR 735
Query: 222 GRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
G V+LL +G+E +F T + ++++I + + + PR++P + P +
Sbjct: 736 GNIVLLLMKGKEEDSF-TKAKDNYEKMQQMIASGARFTFHDDKSPRILPRDIHPTV 790
>gi|330934775|ref|XP_003304700.1| hypothetical protein PTT_17349 [Pyrenophora teres f. teres 0-1]
gi|311318582|gb|EFQ87201.1| hypothetical protein PTT_17349 [Pyrenophora teres f. teres 0-1]
Length = 1322
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 174/308 (56%), Gaps = 23/308 (7%)
Query: 18 NRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQ-NL 76
NR L + F + S++ ++ L YG+ FY + E E K L +
Sbjct: 608 NRGLQSTVYTIFAILASISHGMDLLKFYGMGPFYVKMKEFQDEATKTKSKYKKQILDSDA 667
Query: 77 LQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGET--------TKVIIFAN 128
++L +L+ I + H K L++++ HF ++A G T++++FA+
Sbjct: 668 WKKLMVRLEGWIADDNFV-GHPKLDYLQQVILDHF-VNAGDGRNVDGAPPSQTRIMVFAH 725
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATS 183
+R EI +LK EPM++ +FVGQ S G+TQ++Q E ++KF+ GEFNTLIATS
Sbjct: 726 FRDSAEEIARILKRHEPMIRPRIFVGQAHGKNSEGMTQKDQLEAVEKFKIGEFNTLIATS 785
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQT 243
+GEEGLDIGE+DL+IC+D++ SPI+M+QR+GRTGRKR GR V+L QG+E ++ + +
Sbjct: 786 IGEEGLDIGEVDLIICYDSKASPIRMLQRMGRTGRKRQGRIVMLQMQGKEEND---ANKA 842
Query: 244 CKSYV--EKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKKPK 299
SY+ +++I N + + R++P+ V P + + + I V++ P KK +
Sbjct: 843 NDSYLKMQELIANGTHFNFHEDVSRRILPSDVKPVVDRRVVDIPVENSQQDWLPVPKKGR 902
Query: 300 ENEKANKK 307
+K KK
Sbjct: 903 RTKKPPKK 910
>gi|336267016|ref|XP_003348274.1| hypothetical protein SMAC_02772 [Sordaria macrospora k-hell]
gi|380091928|emb|CCC10194.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1039
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 173/308 (56%), Gaps = 25/308 (8%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV--- 57
M A++ ++ + H+N+ + F + SLA +++ L +G++ FYNNL E
Sbjct: 403 MKARNDWMAGPGK--HVNQGNKFSVIATFAILQSLAHSIKLLNFHGIKPFYNNLAEFRST 460
Query: 58 -SKEDGSCPILGK----DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFR 112
++ G L + D + Q ++ ++ + I+ H K L E L +HF
Sbjct: 461 EEEKGGKGSKLKRQVLEDENFQKMINMIEGWMKIDGF-----LGHPKLEYLCETLVNHF- 514
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEI 167
+ A +G T+ I+F+ YR EI +L +P+ KA++FVGQ S G+ Q++Q E
Sbjct: 515 MDAGEGSNTRAIVFSEYRDSAEEIVRILNN-QPLTKATVFVGQADSKRSEGMKQKQQIET 573
Query: 168 MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
++KF+ G +N L+ATS+GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G V+L
Sbjct: 574 IQKFKDGVYNVLVATSIGEEGLDIGQVDLIVCYDASASPIRMLQRMGRTGRKRAGNIVLL 633
Query: 228 LTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVK 285
L +G+E F + + ++K+I + S ++ R++P + P + K + I ++
Sbjct: 634 LMKGKEEDKFNEAKDNYAT-MQKMICDGSRFSFRHDLSTRIVPRDIRPEVEKKVVEIPLE 692
Query: 286 DRVTPAKP 293
+ P P
Sbjct: 693 NSQNPELP 700
>gi|451853662|gb|EMD66955.1| hypothetical protein COCSADRAFT_283338 [Cochliobolus sativus
ND90Pr]
Length = 1330
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 181/323 (56%), Gaps = 25/323 (7%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDG 62
AK K+ + + + NR L + F + S++ ++ L +G+ FY + E E
Sbjct: 593 AKKKWFQEAGR--NANRGLQSTVHTIFAILASISHGMDLLKFHGVGPFYIKMKEFQDESA 650
Query: 63 SCPILGKDNDL-QNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE-- 119
K L + ++L +L + I + + H K L++++ HF ++A+ G+
Sbjct: 651 KTKSKYKKQILDSDAWKKLMGRLQVWIDNENFV-GHPKLEYLQQVVLDHF-VNADDGQGV 708
Query: 120 ------TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIM 168
T++++FA++R EI +LK EPM++ +FVGQ S G+ Q++Q E +
Sbjct: 709 NGAASSQTRIMVFAHFRDSAEEIARILKRHEPMIRPRIFVGQAHGKNSEGMKQKDQLEAI 768
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
++F+ GEFNTLIATS+GEEGLDIGE+DL+IC+D++ SPI+M+QR+GRTGRKR GR V+L
Sbjct: 769 ERFKNGEFNTLIATSIGEEGLDIGEVDLIICYDSKASPIRMLQRMGRTGRKREGRIVMLQ 828
Query: 229 TQGREAHNFQTSMQTCKSYVEKIINNK--SIYANLAKNGPRMIPAHVTPRI--KCLHIVV 284
QG+E ++ + + E I S + ++++ R++PA V P + + + I V
Sbjct: 829 MQGKEENDANKANDSYLKMQELIAAGTHFSFHDDISR---RILPADVKPVVDRRVVDIPV 885
Query: 285 KDRVTPAKPSKKKPKENEKANKK 307
++ P KK + +K KK
Sbjct: 886 ENSQRDWLPEPKKGRRAKKPEKK 908
>gi|198432334|ref|XP_002123226.1| PREDICTED: similar to Fanconi anemia, complementation group M
[Ciona intestinalis]
Length = 1371
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 163/301 (54%), Gaps = 42/301 (13%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCP------ILGKDNDLQNLL 77
+I+ DF SL LE L+ +G++SF+ L + DG+ +L ++ Q +
Sbjct: 284 IIEGDFATAISLYHGLELLLQHGMKSFFIFLKGIM--DGAKANLRTRNVLSANDQFQEIY 341
Query: 78 QQLKPKLD-------INIMSSEYA-----WSHLKFIRLREILESHFRLHAEKGET----- 120
Q+L + Y+ +SH K +L EI+ ++F + +T
Sbjct: 342 QELTDLFSSHNTNTYVQTHKEAYSDLSICYSHPKLRKLEEIVLTYFHNIQQCADTSNKST 401
Query: 121 -TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ---------------SSGVTQQEQ 164
TKVI+F YR V E+ D+L+ EP+++ FVG S TQ++Q
Sbjct: 402 ETKVIVFCQYRDSVQEVTDLLQQHEPLIRPIKFVGHAPTAKNESPCREGNKSKRFTQKDQ 461
Query: 165 KEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRC 224
E + +F +G +NTLIAT VGEEGLDIG +DL++CFD+ +SPI++VQR+GRTGRKRNG+
Sbjct: 462 LEAVARFCSGVYNTLIATCVGEEGLDIGAVDLIVCFDSHRSPIRLVQRMGRTGRKRNGKI 521
Query: 225 VILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVV 284
V+L+T+G+E ++ +S+ + KS + K ++ S + P MIP + P + I V
Sbjct: 522 VMLITEGKEERDYNSSVASRKS-IGKAMHAGSKSLQYYPHNPPMIPHGIKPVCHKMFITV 580
Query: 285 K 285
K
Sbjct: 581 K 581
>gi|453082678|gb|EMF10725.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Mycosphaerella populorum SO2202]
Length = 847
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 162/272 (59%), Gaps = 27/272 (9%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPK 83
M+ F+V SLA ++ L +G+ FY+ ++ +E S GK N+LQ
Sbjct: 445 MMNVVFNVLASLAHSIGLLKHHGIGPFYSCVLNFQREVESGQQKGKT--AANILQDAN-- 500
Query: 84 LDINIMSSEYAWS-------HLKFIRLREILESHFRLHAEKG--------ETTKVIIFAN 128
+ +MS+ W+ H K LREI+ +HF L A +G T++++FA+
Sbjct: 501 -FVKMMSTIRTWTNKPEFIGHPKLEYLREIVLNHF-LDAGEGRQGSDVPPSATRIMVFAS 558
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATS 183
YR +I VLK EPM++ +FVGQ++ G+ Q++Q +I++ F+ G++NTLIATS
Sbjct: 559 YRDSTEDICRVLKRNEPMIRPHVFVGQAASKGQEGMNQKQQNQIIQDFKGGKYNTLIATS 618
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQT 243
+GEEGLDIG +DL++C+DA SPI+M+QR+GRTGRKR G+ +LLT+G+E +++ + Q
Sbjct: 619 IGEEGLDIGTVDLIVCYDASSSPIRMLQRIGRTGRKRTGKVELLLTKGKEEKDYEKA-QD 677
Query: 244 CKSYVEKIINNKSIYANLAKNGPRMIPAHVTP 275
+Y++K I + S Y PR++P P
Sbjct: 678 NYAYIQKTIADPSKYDYRDDQSPRILPKEFKP 709
>gi|449545739|gb|EMD36709.1| hypothetical protein CERSUDRAFT_123790 [Ceriporiopsis subvermispora
B]
Length = 940
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 150/250 (60%), Gaps = 27/250 (10%)
Query: 99 KFIRLREILESHF-------------RLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEP 145
K +L+E+L HF + A+ ++ I+F ++R V E+ ++L P
Sbjct: 567 KMEKLQELLVQHFAKEMLDKDERTPGQEAADSAAESRAIVFVSFRQCVDEVVELLSHHNP 626
Query: 146 MVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVIC 199
+++A+ F+GQ + G TQ+EQ EI+KKF+ GEFN L++ S+GEEGLDIGE+DL++C
Sbjct: 627 LIRATRFIGQGTDTKGRKGHTQKEQLEIIKKFKTGEFNVLVSMSIGEEGLDIGEVDLIVC 686
Query: 200 FDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYA 259
+DAQK+PI+M+QR+GRTG K++G +LL QGRE HN+ + + K + I+ ++ +
Sbjct: 687 YDAQKTPIRMLQRVGRTGCKKDGYVHVLLAQGREEHNWAKAQASYKEVQQFIV--RAEHL 744
Query: 260 NLAKNGPRMIPAHVTPRIKCLHIV--VKDRVTPAKPSKKKPKENEKANKKSKKKLETDGN 317
L + PR++P HV P C+ +V +++ V K+ +++ + K+K++ D
Sbjct: 745 ELYGDVPRLLPEHVKP--DCVEMVMEIEEHVREDSSRKRSFAGDDEPSSKAKRRKRDDNP 802
Query: 318 SE--PAGKQN 325
+ PAG N
Sbjct: 803 NRNIPAGAAN 812
>gi|346322509|gb|EGX92108.1| helicase C-terminal domain protein [Cordyceps militaris CM01]
Length = 1094
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 172/309 (55%), Gaps = 23/309 (7%)
Query: 16 HINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQN 75
H+N+ + M++ F V SLA +++ L +G++ FY+NLV+ + G Q
Sbjct: 439 HVNQGVQFMMRAIFSVLTSLAHSIKLLNFHGIKPFYDNLVDFRSDQEDKGQKGSKYKRQ- 497
Query: 76 LLQQLKPKLDINIMSSEYAW-------SHLKFIRLREILESHFRLHAEKGETTKVIIFAN 128
L++ P ++M+ +W H K L + + +HF E T+VI+F+
Sbjct: 498 LIEH--PSFQ-DMMNKIASWMKRDGFVGHPKQTALADAVLNHFMDRGED-SGTRVIVFSE 553
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATS 183
YR +I +L +P+VKAS+FVGQ++G + Q +Q + ++KFR+G FN L+ATS
Sbjct: 554 YRDSAEDIVRLLNLHQPLVKASVFVGQAAGKRGEGMKQAQQIQTIEKFRSGHFNVLVATS 613
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQT 243
+GEEGLDIG++DL++C+D+ SPI+M+QR+GRTGRKR G V+LL +G+E F S
Sbjct: 614 IGEEGLDIGQVDLIVCYDSSSSPIRMLQRMGRTGRKRAGNIVLLLMRGKEEEQFAKSKDN 673
Query: 244 CKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVV-----KDRVTPAKPSKKKP 298
+ ++ +I S + R++P ++ P + H+ + +D+ P K+
Sbjct: 674 YEK-MQTLICEGSRFNFRFDLSTRIVPRNIRPEVDKRHVEIPVENTQDKSLPEPKKKRAV 732
Query: 299 KENEKANKK 307
+KA KK
Sbjct: 733 AGKKKAPKK 741
>gi|121703165|ref|XP_001269847.1| helicase C-terminal domain protein [Aspergillus clavatus NRRL 1]
gi|189082419|sp|A1CS00.1|MPH1_ASPCL RecName: Full=ATP-dependent DNA helicase mph1
gi|119397990|gb|EAW08421.1| helicase C-terminal domain protein [Aspergillus clavatus NRRL 1]
Length = 1119
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 160/269 (59%), Gaps = 31/269 (11%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEV-SKEDGSCP-----ILGKDNDLQNLLQQLKP 82
F V SLA A++ L +G+ FY +LV S DG + +D + L+ L+P
Sbjct: 577 FTVLASLAHAIDLLKYHGITPFYRHLVHFRSNTDGQKGGKYQRQIVQDESFKKLMNHLQP 636
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE---------TTKVIIFANYRVVV 133
+ E+ H K L++++ +HF + A +G T++++FA++R
Sbjct: 637 W----TKNPEFI-GHPKLEYLKQVVLNHF-MDAGEGSGADGNHTRSATRIMVFAHFRDSA 690
Query: 134 AEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
EI VLK EP+++ +FVGQSS G+ Q+ Q I++KF+ G++NT++ATS+GEEG
Sbjct: 691 EEIVRVLKRYEPLIRPHVFVGQSSAKGSEGMDQKTQLSIVQKFKKGDYNTIVATSIGEEG 750
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY- 247
LDIGE+DL++C+D+ SPI+M+QR+GRTGRKR G V+LL QG+E ++ ++ +Y
Sbjct: 751 LDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLLLMQGKEEESY---IRAKDNYE 807
Query: 248 -VEKIINNKSIYANLAKNGPRMIPAHVTP 275
++++I + + +A PR++P + P
Sbjct: 808 KMQEMIASGTRFAFHDDTSPRILPPGIRP 836
>gi|258566071|ref|XP_002583780.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907481|gb|EEP81882.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1083
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 184/335 (54%), Gaps = 40/335 (11%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVS------KEDGSCPI-LGKDNDLQNL 76
MI F V SLA A++ L +G+ F+ +LV K+ G C + D + + L
Sbjct: 573 MINSIFTVLASLAHAIDLLKYHGIGPFFRSLVSFEDSVLKEKKGGKCASQIVSDGNFKTL 632
Query: 77 LQQLKPKLDINIMSSEYAWSHLKFIRLREILESHF-----RLHAEKGETTKVIIFANYRV 131
+++L+ SSE H K L++ + +HF +++ T+V+IF+++R
Sbjct: 633 MRKLR-----VWTSSEDFIGHPKMEYLKQAILNHFLDVGSKINESAESDTRVMIFSHFRD 687
Query: 132 VVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGE 186
EI VLK +PM++ +FVGQ S G+ Q+ Q +++ KF+ G +NT++ATS+GE
Sbjct: 688 SAEEIVRVLKKHQPMIRPHVFVGQANAKGSEGMDQKTQLDVVSKFKTGTYNTIVATSIGE 747
Query: 187 EGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCK- 245
EGLDIGE+DL+IC+D SPI+M+QR+GRTGRKR G ++LL++G+E ++ CK
Sbjct: 748 EGLDIGEVDLIICYDGHSSPIRMLQRMGRTGRKRAGNIILLLSKGKEEESY------CKA 801
Query: 246 --SY--VEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKKPK 299
SY ++++I + + + PR+IP V + K + I +++ ++ +P
Sbjct: 802 KDSYEKMQQLIASGTRFTFHDDKSPRIIPRDVHQEVEEKVIDIPLEN----SQSGLPEPT 857
Query: 300 ENEKANKKSKKKLE-TDGNSEPAGKQNKTNAKKTK 333
+ +A K+ KK DG K ++ KTK
Sbjct: 858 KRARAPKRPPKKFHMPDGVETGFTKASRLGRTKTK 892
>gi|355693246|gb|EHH27849.1| hypothetical protein EGK_18153 [Macaca mulatta]
Length = 2016
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 177/327 (54%), Gaps = 45/327 (13%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 335 ILARDQFRKNPS--PNIVGIQQGVIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 390
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS---------------EYAWSHLK 99
DG+ + LG++ D L L+ +S ++ +SH K
Sbjct: 391 DGTKGMTRSKNELGRNEDFMKLYNHLECMFAHTRSTSADSVSAIQQAGDKNKKFVYSHPK 450
Query: 100 FIRLREILESHFR-LHAE-----KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFV 153
+L E++ HF+ +AE K + T+V+IF+++R V EI ++L +P+++ FV
Sbjct: 451 LKKLEEVVIEHFKSWNAENTSEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFV 510
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +SG TQ+EQ E+ F+ G T VGEEGLDIGE+DL+ICFD+QKSPI+
Sbjct: 511 GHASGKSTKGFTQKEQLEVKSYFKNG-------TCVGEEGLDIGEVDLIICFDSQKSPIR 563
Query: 209 MVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRM 268
+VQR+GRTGRKR GR V++L++GRE + S ++ + I +N+ + + + PRM
Sbjct: 564 LVQRMGRTGRKRQGRIVVILSEGREERIYNQSQSNKRNICKAISSNRQVL-HFYQRSPRM 622
Query: 269 IPAHVTPRIKCLHIVVKDRVTPAKPSK 295
+P + P++ + + P KPS+
Sbjct: 623 VPDGINPKLHKM-FITHGVYEPEKPSR 648
>gi|116180300|ref|XP_001219999.1| hypothetical protein CHGG_00778 [Chaetomium globosum CBS 148.51]
gi|121791807|sp|Q2HG76.1|MPH1_CHAGB RecName: Full=ATP-dependent DNA helicase MPH1
gi|88185075|gb|EAQ92543.1| hypothetical protein CHGG_00778 [Chaetomium globosum CBS 148.51]
Length = 1134
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 156/284 (54%), Gaps = 25/284 (8%)
Query: 16 HINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGK------ 69
H N+ + M+ F + SLA ++ L +G++ FYN L E + P G
Sbjct: 444 HANQGVKFMMMAVFSILQSLAHLIKLLNFHGIKPFYNGLAEFRSSEEGKPGQGSKLKRQL 503
Query: 70 --DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
D Q ++ ++ M E H K L E L +HF + A + T+ I+F+
Sbjct: 504 LADESFQRMMALIE-----RWMRMEEFNGHPKLTYLCETLVNHF-IDAGENSNTRAIVFS 557
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIAT 182
YR EI +L +P+++A++FVGQ S G+ Q++Q E ++KF+ G FN L+AT
Sbjct: 558 EYRDSAEEIVRLLN-NQPLIRATVFVGQADSKRSEGMKQKQQIETIEKFKNGGFNVLVAT 616
Query: 183 SVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQ 242
S+GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G V+LL +G+E F ++
Sbjct: 617 SIGEEGLDIGQVDLIVCYDASASPIRMLQRMGRTGRKRAGNIVLLLMKGKEEEKF---LE 673
Query: 243 TCKSY--VEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVV 284
+Y ++++I N + R++P + P + H+ +
Sbjct: 674 AKDNYQKMQQLICNGDGFTFRHDLSTRIVPRDIRPEVDKRHVDI 717
>gi|392597186|gb|EIW86508.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1287
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 166/302 (54%), Gaps = 22/302 (7%)
Query: 35 LASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYA 94
LA + L+ Y++L E + + + + + +D + L ++L+ +LD +
Sbjct: 487 LARCMGYLLESSASMCYHSLQEFASGNSASKKIAEGDDFKALARELQTQLDHG------S 540
Query: 95 WSHLKFIRLREILESHF--RLHAEK--GETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
H K L+++L HF R+ ++ GE T+ ++F +R V E+ +VL P+++A+
Sbjct: 541 SLHPKMELLKDLLVQHFGTRMGEDEDGGEDTRAMVFITFRDCVDEVVNVLNQENPLIRAT 600
Query: 151 MFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
F+GQ + G Q+EQ + ++KF+ G FN L++TS+GEEGLDIGE+D+++C+DAQK
Sbjct: 601 RFIGQGTDKSGRKGFAQKEQLQTIQKFKDGTFNVLVSTSIGEEGLDIGEVDMIVCYDAQK 660
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKN 264
+PI+M+QR+GRTGRKR G +LL + RE N+ + +T + + I+ + L +
Sbjct: 661 TPIRMLQRVGRTGRKRAGYVHVLLAETREEANWDKAQETYEDLQKAIVRGDQV--ELYGD 718
Query: 265 GPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKKLETD--GNSEP 320
PR++P H P+ K + I R P K + + K KK+ D + P
Sbjct: 719 VPRLLPDHAKPQPLEKVMEIEAYSRDVPLLRKKSSAVGGDDPSGKGKKRKRNDDIARNIP 778
Query: 321 AG 322
AG
Sbjct: 779 AG 780
>gi|334183045|ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis thaliana]
gi|332193686|gb|AEE31807.1| fanconi anemia group M protein [Arabidopsis thaliana]
Length = 1390
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 170/299 (56%), Gaps = 20/299 (6%)
Query: 1 MLAKDKYVKSK-AQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSK 59
++A+DK+ ++ PH+N ++ F +L + L ++G+R Y L E K
Sbjct: 359 LMARDKFRQAPLPGLPHVNHG---DVESCFAALITLYHIRKLLSSHGIRPAYEMLEEKLK 415
Query: 60 EDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE 119
E ++ K+ D++ ++ +L S K ++ EIL HF++ K
Sbjct: 416 EGPFARLMSKNEDIRMTKLLMQQRLSHGAPSP-------KLSKMLEILVDHFKVKDPK-- 466
Query: 120 TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVT-----QQEQKEIMKKFRAG 174
T++VIIF+N+R V +I + L + MVKA+ F+GQSSG T Q+ Q+ +++KFRAG
Sbjct: 467 TSRVIIFSNFRGSVRDIMNALSNIGDMVKATEFIGQSSGKTLKGQSQKIQQAVLEKFRAG 526
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT-QGRE 233
FN ++ATS+GEEGLDI E+DLVICFDA SP++M+QR+GRTGRK NGR +++L +G E
Sbjct: 527 GFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRKNNGRPLLVLACEGSE 586
Query: 234 AHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAK 292
+++ + ++ + + N + N + PRMIP P ++ + +K V K
Sbjct: 587 KNSYMRKQASGRAIKKHMRNGGTNSFNFHPS-PRMIPHVYKPEVQHVEFSIKQFVPRGK 644
>gi|400595357|gb|EJP63162.1| type III restriction enzyme [Beauveria bassiana ARSEF 2860]
Length = 1213
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 157/279 (56%), Gaps = 18/279 (6%)
Query: 16 HINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQN 75
H+N+ + M++ F V SLA +++ L +G++ FY+NL++ +E G Q
Sbjct: 408 HVNQGVQFMMRAIFSVLTSLAHSIKLLTFHGIKPFYDNLLDFRREQEEKGQKGSKYKRQ- 466
Query: 76 LLQQLKPKLDINIMSSEYAW-------SHLKFIRLREILESHFRLHAEKGETTKVIIFAN 128
L++ K ++M +W H K L + + +HF E T+VI+F+
Sbjct: 467 LIEHPSFK---DMMDKIASWMKRDGFVGHPKQTALADTVLNHFMDRGED-SGTRVIVFSE 522
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQS-----SGVTQQEQKEIMKKFRAGEFNTLIATS 183
YR +I +L P+VKAS+FVGQ+ G+ Q +Q E ++KFR G FN L+ATS
Sbjct: 523 YRDSAEDIVRLLNMHAPLVKASIFVGQAVGKRGEGMKQAQQIETVEKFRNGHFNVLVATS 582
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQT 243
+GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G V+LL +G+E F S
Sbjct: 583 IGEEGLDIGQVDLIVCYDASASPIRMLQRMGRTGRKRAGNIVLLLMRGKEEDQFAKSKDN 642
Query: 244 CKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHI 282
+ ++ +I S + R++P ++ P + H+
Sbjct: 643 YEK-MQSLICEGSRFNFRFDLSTRIVPRNIRPEVDKRHV 680
>gi|336367421|gb|EGN95766.1| hypothetical protein SERLA73DRAFT_76832 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380136|gb|EGO21290.1| hypothetical protein SERLADRAFT_441648 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1398
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 122/191 (63%), Gaps = 12/191 (6%)
Query: 97 HLKFIRLREILESHFRLHAEKGE----TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMF 152
H K L+ +L HF GE TT+ ++F +R V EI +VL P++KA+ F
Sbjct: 573 HPKMEMLKTLLVQHFGATMADGEQEGGTTRAMVFVTFRDCVDEIVEVLNEEMPLLKATRF 632
Query: 153 VGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
+GQ + G Q+EQ E++KKF+AGEFN L++TS+GEEGLDIGE+D++IC+DAQK+P
Sbjct: 633 IGQGTDKQGRKGFAQKEQIEVLKKFKAGEFNVLVSTSIGEEGLDIGEVDMIICYDAQKTP 692
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGP 266
I+M+QR+GRTGRKR+G +LL++ RE N++ + + I+ + L +
Sbjct: 693 IRMLQRVGRTGRKRDGYVHVLLSEIREEDNWEKAKDAYGELQKSIVRGDQL--ELYSDVE 750
Query: 267 RMIPAHVTPRI 277
R++P+HV P +
Sbjct: 751 RLLPSHVKPEL 761
>gi|295663599|ref|XP_002792352.1| helicase C-terminal domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226279022|gb|EEH34588.1| helicase C-terminal domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1135
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 182/338 (53%), Gaps = 45/338 (13%)
Query: 2 LAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV---S 58
+A+ ++++S A N + MI F V SLA A++ L +G+ FY NL+ S
Sbjct: 567 VARQEWMRSPAGR-SANTGVKFMINAIFTVLASLAHAIDLLKYHGIGPFYRNLISFQSSS 625
Query: 59 KEDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWS-------HLKFIRLREILESHF 111
E G + D N K+ +M+ AW+ H K L++++ +HF
Sbjct: 626 SEAGGAKYRRQVADCDNF------KI---LMARMRAWTNNADFIGHPKLEYLKQVVLNHF 676
Query: 112 -------RLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGV 159
T++++FA++R EI VLK EPM++ +FVGQ S G+
Sbjct: 677 MDAGDGAGAAGGNPSDTRIMVFAHFRDSAEEIVRVLKRHEPMIRPHVFVGQAAAKGSEGM 736
Query: 160 TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK 219
Q+ Q +I++KF+ G +NT++ATS+GEEGLDIGEIDL++C+D+ SPI+M+QR+GRTGRK
Sbjct: 737 DQKTQLDIIEKFKKGIYNTIVATSIGEEGLDIGEIDLIVCYDSSASPIRMLQRMGRTGRK 796
Query: 220 RNGRCVILLTQGREAHNFQTSMQTCKSY--VEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
R G V+LL +G+E ++ M+ +Y ++++I + + + PR++P + P +
Sbjct: 797 RRGNIVLLLMKGKEEDSY---MKAKDNYQKMQQMIASGTRFTFHYDKSPRILPRDIQPSV 853
Query: 278 KCLHIVVKDRVTPAKPSKK---KPKENEKANKKSKKKL 312
+ I + PA+ S +P + + K+ KK
Sbjct: 854 VEIRIDI-----PAENSTADLPEPSKRSRVPKRPPKKF 886
>gi|212539558|ref|XP_002149934.1| DEAD box helicase Mph1, putative [Talaromyces marneffei ATCC 18224]
gi|210067233|gb|EEA21325.1| DEAD box helicase Mph1, putative [Talaromyces marneffei ATCC 18224]
Length = 1129
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 186/344 (54%), Gaps = 34/344 (9%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEV-SKEDG-----SCPILGKDNDLQNLLQQLKP 82
F V SLA +++ L +G+ FYN+LV S DG + L +D++ + L+ L+P
Sbjct: 567 FTVLASLAHSIDLLKYHGIVPFYNHLVSFKSNTDGQKGGKTQRALVQDDNFKKLMDHLQP 626
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE------TTKVIIFANYRVVVAEI 136
+E+ H K LRE++ ++F + E E T+V+IFA++R EI
Sbjct: 627 WC----RDTEFI-GHPKLGYLRELVLNYFMDNGEGTEETSGTSNTRVMIFAHFRDSAEEI 681
Query: 137 FDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDI 191
VLK EP+++ +FVGQ S G+ Q+ Q +++KF+ G +NT++ATS+GEEGLDI
Sbjct: 682 TRVLKRQEPIIRPHVFVGQANAKGSEGMDQKTQLSVIEKFKNGTYNTIVATSIGEEGLDI 741
Query: 192 GEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKI 251
GE+DL++C+D+ SPI+M+QR+GRTGRKR G +LL QG+E ++ + + E I
Sbjct: 742 GEVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIKLLLMQGKEEESYIKAKDNYEKMQELI 801
Query: 252 INNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKK 311
+ + K+ R++P V P + VV+ + ++ +PK+ +A K+ KK
Sbjct: 802 ASGTRFEFHDDKSA-RILPKDVRPTVD--KRVVEIPLENSQADLPEPKKKGRAPKRPPKK 858
Query: 312 LETDGNSEPAGKQNKTNAKKTKKQPMMTQSNDIRTCFENITKKK 355
P G + TK + + DIR+ + + KK
Sbjct: 859 FHM-----PDGVETGF----TKASRIGEEGGDIRSMLQKSSAKK 893
>gi|358398770|gb|EHK48121.1| hypothetical protein TRIATDRAFT_215658 [Trichoderma atroviride IMI
206040]
Length = 1084
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 156/276 (56%), Gaps = 14/276 (5%)
Query: 18 NRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNL- 76
N+ + M++ F V SLA +++ L +G+R FY+N+V+ E G Q L
Sbjct: 414 NQGIQFMMRAIFSVLTSLAHSIKLLQYHGIRPFYDNMVDFRSEQEGKGEKGSKYRRQILD 473
Query: 77 ---LQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVV 133
Q++ K+ + + + H K L + + +HF + GE T+VI+F+ YR
Sbjct: 474 STSFQEMMDKISGWLKTDGFV-GHPKLTALADCVLNHF---MDNGEATRVIVFSEYRDSA 529
Query: 134 AEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
EI + P++KA++FVGQ+ G + Q++Q + ++KF+ G +N L+ATS+GEEG
Sbjct: 530 EEIVRMFNTHRPLIKATVFVGQADGKRGEGMKQKQQIDTIEKFKTGAYNVLVATSIGEEG 589
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYV 248
LDIG++DL++C+D+ SPI+M+QR+GRTGRKR G +LL +G+E F S + +
Sbjct: 590 LDIGQVDLIVCYDSSASPIRMLQRMGRTGRKRAGNITLLLMRGKEEEQFAKSKDNYEK-M 648
Query: 249 EKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVV 284
+++I S + R++P + P + H+ +
Sbjct: 649 QQLICEGSRFNFRFDLSTRIVPRDIRPEVDMRHVEI 684
>gi|358056839|dbj|GAA97189.1| hypothetical protein E5Q_03865 [Mixia osmundae IAM 14324]
Length = 1221
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 124/188 (65%), Gaps = 13/188 (6%)
Query: 97 HLKFIRLREILESHFRLHAEKGE-TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ 155
H K +L E++ HF A +GE +T+V++F ++R VV EI L +P + A+ FVGQ
Sbjct: 503 HPKMAKLLEMILEHFENAAAQGEQSTRVMVFCSFRAVVEEIVQSLNRHKPKISATRFVGQ 562
Query: 156 SS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
S+ G TQ+EQ++++ F+AG FNTLIATSVGEEGLDIGE+DL++C++A SPI+
Sbjct: 563 STDKKGARGFTQKEQQKVLNDFKAGTFNTLIATSVGEEGLDIGEVDLIVCYEAISSPIRT 622
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNK--SIYANLAKNGPR 267
+QR+GRTGR R+G ++L+ +GRE N+ + + K+ I+ K +YA+ R
Sbjct: 623 LQRIGRTGRARDGGVIVLMAEGREEVNWTRANENYKTVQNAILAGKVFELYADCQ----R 678
Query: 268 MIPAHVTP 275
++PA + P
Sbjct: 679 LVPADINP 686
>gi|322699135|gb|EFY90899.1| ATP-dependent DNA helicase mph1 [Metarhizium acridum CQMa 102]
Length = 1070
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 174/315 (55%), Gaps = 28/315 (8%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
M A+ ++ ++ + H N+ + M++ F V SLA +++ L +G++ FY+N+ + E
Sbjct: 399 MQAQKEWFATRGR--HANQGVQFMMRAIFGVLTSLAHSIKLLNFHGIKPFYDNMKDFRSE 456
Query: 61 DGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYA-W-------SHLKFIRLREILESHFR 112
GK +QL M + W H K L + + +HF
Sbjct: 457 QE-----GKGEKGSKYKRQLIEHSSFQKMMDHISRWLRADGFVGHPKLAALVDCVLNHFM 511
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEI 167
E G T+VI+F+ YR +I L +P++KAS+FVGQ+ G + Q +Q +
Sbjct: 512 DQGE-GSATRVIVFSEYRDSAEDIVCQLNKHQPLLKASVFVGQADGKRGEGMKQAQQIQT 570
Query: 168 MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
++KFR GEFN L+ATS+GEEGLDIG++DL++C+D+ SPI+M+QR+GRTGRKR G V+L
Sbjct: 571 IEKFRKGEFNVLVATSIGEEGLDIGQVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLL 630
Query: 228 LTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVV- 284
L +G+E F S + ++ ++K+I S + R++P + P + K + I +
Sbjct: 631 LMRGKEEDQFAKSKDSYEN-MQKLICEGSRFNFRFDLSTRIVPREIRPEVAKKFVEIPIE 689
Query: 285 --KDRVTPAKPSKKK 297
+DR P +P K++
Sbjct: 690 NTQDRSLP-EPKKRR 703
>gi|157123248|ref|XP_001660079.1| hypothetical protein AaeL_AAEL009460 [Aedes aegypti]
gi|108874431|gb|EAT38656.1| AAEL009460-PA [Aedes aegypti]
Length = 1557
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 174/357 (48%), Gaps = 48/357 (13%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKL 84
I DF S+ ALE LV +G+R+F N + + KD L+ L +L+ +
Sbjct: 345 INSDFITCVSMYHALELLVRHGVRAFLNFFEDEHNRTEEKYFVAKDPRLKAFLDELREEY 404
Query: 85 DIN---IMSSEYA---------------WSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
N I + A + H KF ILE + + H + +KVIIF
Sbjct: 405 GRNPLAIFGGDPATANGMVGQPKEEVTDFGHPKFA----ILERNLKEHFQNNPDSKVIIF 460
Query: 127 ANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLI 180
YR VA I +L P++K VGQ VTQ+EQ MK FR+G NTLI
Sbjct: 461 CEYRESVAMIQRLLLQNRPLIKPKCIVGQGGTAGGLRAVTQKEQIAAMKDFRSGACNTLI 520
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT V EEG+D+GE+DL++CFD K+P + VQR+GRTGR+R GR ++L+T+G+E +
Sbjct: 521 ATCVAEEGIDVGEVDLIVCFDIAKNPTRFVQRIGRTGRQRVGRVLMLVTEGKEHDTLKEV 580
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKE 300
M + +K+ +K I L + PR++P P KC+ +K PS+ E
Sbjct: 581 MASKDKTNQKLSRSKEILGILYRQSPRLVPTEFDP--KCVETFIK------IPSE---AE 629
Query: 301 NEKANKKSKKKLETDGNSEPAGKQNKTNAKKTKKQ------PMMTQSNDIRTCFENI 351
E +KK +K+ + D N ++T+K+ P TQ D+R F +
Sbjct: 630 EEVKSKKDRKR-KNDENQVEEATAEVVEEQETRKRRKKAEAPRGTQ--DVRNFFRKV 683
>gi|301106548|ref|XP_002902357.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262098977|gb|EEY57029.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 829
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 157/288 (54%), Gaps = 34/288 (11%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDG 62
A++K+ KS N +R + D + SL A L +GL SF
Sbjct: 438 AREKFRKSP------NYASNRSAESDLALLVSLLHAKSLLTGHGLSSF------------ 479
Query: 63 SCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTK 122
+D + + ++ K K+ + + H K ++LR++L HF+ H+ G +T+
Sbjct: 480 ------RDQIMSWMEERKKGKMSWSKREMLQSPDHPKLVKLRQVLLEHFQRHSAGGSSTR 533
Query: 123 VIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS--------GVTQQEQKEIMKKFRAG 174
I+F YR V+EI +L+PL P++ A F+GQ + G +Q+ Q+EI+++FR G
Sbjct: 534 AIVFTQYRASVSEIVALLRPLAPLLNAQPFIGQGATGKAKENKGQSQKVQQEIVRRFRLG 593
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREA 234
EFN L+AT + EEGLDIGE+DL++ FDA SP++M+QR+GRTGRKR GR +IL+T+G E
Sbjct: 594 EFNVLVATCIAEEGLDIGEVDLIVSFDALTSPVRMIQRMGRTGRKRVGRVIILVTEGDEQ 653
Query: 235 HNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHI 282
S K+ + KS + PRMIP + P+++ L +
Sbjct: 654 KKLARSASAAKTVSRALTTFKSRFTY--SKCPRMIPTGICPQLRELEM 699
>gi|390356128|ref|XP_003728711.1| PREDICTED: uncharacterized protein LOC587521 [Strongylocentrotus
purpuratus]
Length = 1822
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 170/338 (50%), Gaps = 71/338 (21%)
Query: 2 LAKDKYVKSKAQF-----PHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLV- 55
L+K + +KS+ F P I I+ DF + SL E L+ +G RS Y+ L+
Sbjct: 447 LSKFQILKSREAFRQDPPPEITAARRGPIEGDFAICMSLYHGFELLLQHGQRSLYSFLLG 506
Query: 56 EVSKEDGSC---PILGKDNDLQNLLQQLKPKLDINI---------------------MSS 91
+ G+ L ++ D NL++ L+ K ++ MSS
Sbjct: 507 TIDGSKGNARKRSELMRNADFSNLIETLEAKYAGSMNTSHNTSHNTSSHNSSGLFTSMSS 566
Query: 92 -------------------EYAWSHLKFIRLREILESHFR-----LHAEKGETT------ 121
EY SH K +L+E++ HF AE+G +T
Sbjct: 567 PSSRATGSKGIGGCKEEVEEYVSSHPKITKLKEVVLEHFEKFTSDHKAEEGPSTSSKAPS 626
Query: 122 ----KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKF 171
+V+IFA YR V EI +L P V+ F+GQ+S G +Q+EQ ++ +F
Sbjct: 627 RPSTRVMIFAQYRDSVQEITHMLNRHRPAVRCMSFIGQASAGKNTKGFSQKEQIRVVSEF 686
Query: 172 RAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
+ G +NTL++T VGEEGLDIG++DL++CFDA KSPI++VQR+GRTGRKR GR V+L+T+G
Sbjct: 687 KNGGYNTLVSTCVGEEGLDIGDVDLIVCFDAHKSPIRLVQRMGRTGRKREGRIVMLVTEG 746
Query: 232 REAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
+EA + S Q K + + + + +L PRMI
Sbjct: 747 KEAAIYDRS-QYSKKGIHRALQGSNKSLHLYPCSPRMI 783
>gi|261196434|ref|XP_002624620.1| ATP-dependent DNA helicase MPH1 [Ajellomyces dermatitidis SLH14081]
gi|239595865|gb|EEQ78446.1| ATP-dependent DNA helicase MPH1 [Ajellomyces dermatitidis SLH14081]
gi|239609438|gb|EEQ86425.1| ATP-dependent DNA helicase MPH1 [Ajellomyces dermatitidis ER-3]
gi|327357011|gb|EGE85868.1| ATP-dependent DNA helicase MPH1 [Ajellomyces dermatitidis ATCC
18188]
Length = 1145
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 168/299 (56%), Gaps = 33/299 (11%)
Query: 2 LAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLV--EVSK 59
+A +++ S A + N MI F V SLA A++ L +G+ FY NLV + S
Sbjct: 572 VASQEWMNSPAGR-NANYSFKGMILNIFSVLSSLAHAIDLLKFHGIGPFYRNLVAFQSSL 630
Query: 60 EDGSCPILGK------DND-LQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFR 112
DG GK DN+ + L+ +L+ ++E H K L++++ +HF
Sbjct: 631 SDGGG---GKYRRQVADNENFKTLMNRLR-----TWTNNEDFIGHPKLQYLKQVVLNHFM 682
Query: 113 LHAEKGET---------TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSG 158
G+T T++++FA++R EI VL PM++ +FVGQ S G
Sbjct: 683 DAEVNGDTPSANRRPSNTRIMVFAHFRDSAEEIVRVLARHGPMIRPHVFVGQAAAKGSEG 742
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
+ Q+ Q +I++KF+ G +NT++ATS+GEEGLDIGE+DL++C+D+ SPI+M+QR+GRTGR
Sbjct: 743 MDQKTQLDIIEKFKKGTYNTIVATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGR 802
Query: 219 KRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
KR G V+LL +G+E +F T + ++++I + + + PR++P + P +
Sbjct: 803 KRRGNIVLLLMKGKEEDSF-TKAKDNYEKMQRMIASGTRFTFHDDKSPRILPREIQPSV 860
>gi|242804208|ref|XP_002484328.1| DEAD box helicase Mph1, putative [Talaromyces stipitatus ATCC
10500]
gi|218717673|gb|EED17094.1| DEAD box helicase Mph1, putative [Talaromyces stipitatus ATCC
10500]
Length = 1101
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 174/306 (56%), Gaps = 38/306 (12%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEV-SKEDGSCP-----ILGKDNDLQNLLQQLKP 82
F V SLA +++ L +G+ FYN+LV S DG + +D++ + L+ +L+P
Sbjct: 547 FTVLASLAHSIDLLKYHGIVPFYNHLVSFKSNTDGQKGGKHQRAIVQDDNFKKLMDRLQP 606
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKG----ETTKVIIFANYRVVVAEIFD 138
E+ H K LREI+ +HF + A +G T+++IFA++R EI
Sbjct: 607 W----CRDPEFI-GHPKLGYLREIVLNHF-MDAGEGTNGTSNTRLMIFAHFRDSAEEITR 660
Query: 139 VLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGE 193
VL+ EP+++ +FVGQ+S G+ Q+ Q +++KF+ G +NT++ATS+GEEGLDIGE
Sbjct: 661 VLRRHEPIIRPHVFVGQASAKGSEGMDQKTQLSVIEKFKNGTYNTIVATSIGEEGLDIGE 720
Query: 194 IDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY--VEKI 251
+DL++C+D+ SPI+M+QR+GRTGRKR G ++LL QG+E ++ ++ +Y ++++
Sbjct: 721 VDLIVCYDSSASPIRMLQRMGRTGRKRAGNIILLLMQGKEEESY---IRAKDNYEKMQEL 777
Query: 252 INNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKK-----PKENEKANK 306
I + S + R++P + P V RV P + PK+ +A K
Sbjct: 778 IASGSRFEFHDDKSARILPKDLKP-------TVDKRVVEIPPENSQEDLPEPKKKGRAPK 830
Query: 307 KSKKKL 312
+ K+
Sbjct: 831 RPPKRF 836
>gi|429860114|gb|ELA34863.1| helicase c-terminal domain-containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 1046
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 148/254 (58%), Gaps = 20/254 (7%)
Query: 18 NRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILG--------K 69
N L M++ F + SLA ++ L +G+R FY NL E E G +
Sbjct: 447 NPGLQGMMRSVFSILQSLAHTIKLLNFHGVRPFYENLNEFRSEVEEKGAKGSKYKKQILE 506
Query: 70 DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANY 129
Q ++ ++ L I+ +S H K L++ + +HF + T+VI+F+ Y
Sbjct: 507 SEHFQEMMSNMEKWLRIDGFAS-----HPKLTELQDRILNHF-MDNGGNSATRVIVFSEY 560
Query: 130 RVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSV 184
R +I VL +P++KA++FVGQ S+G+ Q EQ E ++KF+ G++N L+ATS+
Sbjct: 561 RDSAEDIVQVLNRHKPLIKATVFVGQADSKRSAGMKQAEQIETIEKFKDGKYNVLVATSI 620
Query: 185 GEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTC 244
GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G ++LL +G+E F S
Sbjct: 621 GEEGLDIGQVDLIVCYDASSSPIRMLQRMGRTGRKRAGNIILLLMRGKEEEAFARSKDNY 680
Query: 245 KSYVEKIINNKSIY 258
+ ++KII++ S +
Sbjct: 681 -AEMQKIISDGSKF 693
>gi|452001997|gb|EMD94456.1| hypothetical protein COCHEDRAFT_1192531 [Cochliobolus
heterostrophus C5]
Length = 1299
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 182/326 (55%), Gaps = 28/326 (8%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDG 62
AK K+ + + + NR L + F + S++ ++ L +G+ FY + E E
Sbjct: 562 AKKKWFQEAGR--NANRGLQSTVHTIFAILASISHGMDLLKFHGVGPFYIKMKEFQDESA 619
Query: 63 SCPILGKDNDLQ-NLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE-- 119
K L + ++L +L + M+ E H K L++++ HF ++A+ G+
Sbjct: 620 KTKSKYKKQILDSDAWKKLMGRLQV-WMADENFVGHPKLEYLQQVVLDHF-INADDGQGV 677
Query: 120 ------TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIM 168
T++++FA++R EI +LK EPM++ +FVGQ S G+ Q++Q + +
Sbjct: 678 NGAASSQTRIMVFAHFRDSAEEIARILKRHEPMIRPRIFVGQAHGKNSEGMKQKDQLDAI 737
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
++F+ GEFNTLIATS+GEEGLDIGE+DL+IC+D++ SPI+M+QR+GRTGRKR GR V+L
Sbjct: 738 ERFKNGEFNTLIATSIGEEGLDIGEVDLIICYDSKASPIRMLQRMGRTGRKREGRIVMLQ 797
Query: 229 TQGREAHNFQTSMQTCKSYVEKIINNK--SIYANLAKNGPRMIPAHVTPRI--KCLHIVV 284
QG+E ++ + + E I + + ++++ R++PA V P + + + I V
Sbjct: 798 MQGKEENDANKANDSYLKMQELIAAGTHFNFHDDISR---RILPADVKPVVDRRIVDIPV 854
Query: 285 KDRVTPAKPSKKKPKENEKANKKSKK 310
++ P +PK +A K KK
Sbjct: 855 ENSQHDWLP---EPKTGRRAKKPEKK 877
>gi|259489484|tpe|CBF89793.1| TPA: DNA helicase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 971
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 164/304 (53%), Gaps = 42/304 (13%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEV-SKEDGSCP-----ILGKDNDLQNLLQQLKP 82
F V S+A ++ L +G+ Y +L+ S DG + +D + L+ L P
Sbjct: 431 FTVLASMAHGIDLLKYHGITPLYRHLLHFQSNTDGKKGGKYQRQIVQDEHFKKLMNYLTP 490
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFR-----LHAEKGE---TTKVIIFANYRVVVA 134
+ E+ H K LR+++ +HF H E T+V+IF ++R
Sbjct: 491 W----TRNPEFI-GHPKLEYLRQVVLNHFMDAGEGTHGAGNENQTATRVMIFVHFRDSAE 545
Query: 135 EIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
E+ VLK EPM++ +FVGQSS G+ Q+ Q +I++KF+ G +NT++ATS+GEEGL
Sbjct: 546 EVTRVLKRYEPMIRPHVFVGQSSAKGSEGMGQKTQLDIIQKFKKGTYNTIVATSIGEEGL 605
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY-- 247
DIGE+DL++C+D+ SPI+M+QR+GRTGRKR G V+LL QG+E N+ ++ +Y
Sbjct: 606 DIGEVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLLLMQGKEEENY---LKAKDNYEK 662
Query: 248 VEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKK 307
++++I + S + PR+IP + P H+ + P ENE ++
Sbjct: 663 MQQLIASGSQFTFHDDRSPRIIPRGIKPVPDKRHVDI-------------PNENEASDLP 709
Query: 308 SKKK 311
KK
Sbjct: 710 EPKK 713
>gi|19114536|ref|NP_593624.1| ATP-dependent 3' to 5' DNA helicase (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74698622|sp|Q9HE09.1|MFH2_SCHPO RecName: Full=Putative ATP-dependent RNA helicase mfh2; AltName:
Full=FancM homolog protein 2
gi|12038920|emb|CAC19734.1| ATP-dependent 3' to 5' DNA helicase (predicted)
[Schizosaccharomyces pombe]
Length = 783
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 146/264 (55%), Gaps = 18/264 (6%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEV-----SKEDGSCPILGKDNDLQNLLQQ 79
I F + S A L +G+ FY LVE K G L L+
Sbjct: 377 IMSCFTLLISCAHITYLLDCHGIIQFYQKLVETKNKAEGKGSGQSFWLFTSKPFAFYLEH 436
Query: 80 LKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDV 139
L K+ + +H K L E+L+ HF+ +E + +V+IF +R I
Sbjct: 437 LHNKIQ------GLSLNHPKMNHLLELLKEHFKDTSEGYQNQRVMIFTEFRNTAEYITTT 490
Query: 140 LKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEI 194
L + PMV+AS+F+GQ S+G+ Q +QKE + +FRAG NTL+ATS+GEEGLDIG+
Sbjct: 491 LLAIRPMVRASLFIGQANSAYSTGMNQMQQKETIDQFRAGVINTLVATSIGEEGLDIGDT 550
Query: 195 DLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINN 254
D++IC+DA SPI+ +QR+GRTGRK++G+ +LLT+ E ++ S Q V+K+I +
Sbjct: 551 DMIICYDASSSPIRTIQRMGRTGRKKSGKVFVLLTEDCEDSKWERS-QVSYRRVQKVIES 609
Query: 255 KSIYANLAKNGPRMIPAHVTPRIK 278
A L K+ PR+IP+++ P K
Sbjct: 610 GKKIA-LKKDVPRLIPSNIQPIFK 632
>gi|443921956|gb|ELU41478.1| fanconi anemia complementation group M [Rhizoctonia solani AG-1 IA]
Length = 1789
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 169/318 (53%), Gaps = 27/318 (8%)
Query: 69 KDNDLQNLLQQL-KPKLDINIMSSEYAWS-HLKFIRLREILESHFRLHAEKGETTKVIIF 126
K+ + Q L Q+ K +L+ M S + H K +L EIL HF T+V++F
Sbjct: 1059 KNTEFQATLNQISKYRLEGAGMGSATRFPPHPKMEKLNEILVGHF--DTPDANETRVMVF 1116
Query: 127 ANYRVVVAEIFDVLKPLEPM-VKASMFVGQSSG------VTQQEQKEIMKKFRAGEFNTL 179
N+R V EI L E +KA F+GQ+ G ++Q+EQ +K+F++GEFN L
Sbjct: 1117 TNFRESVDEIVAHLNSNESGKIKAHRFIGQAGGKGGDKGMSQKEQLGAIKRFKSGEFNVL 1176
Query: 180 IATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
+ATS+GEEGLDIGEIDL++C+DAQK+P++M+QR+GRTGRKR G+ V+LL + RE N++
Sbjct: 1177 VATSIGEEGLDIGEIDLIVCYDAQKAPVRMLQRVGRTGRKREGKVVVLLAEIREERNWEK 1236
Query: 240 SMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPK 299
+ ++ + + II+ SI L + RM+P V P +C+ K +P
Sbjct: 1237 AKESYRDVQQAIIDGSSI--ELFNDAARMVPEGVQP--QCIE----------KRLDIEPY 1282
Query: 300 ENEKANKKSKKKLETDGNSEPAGKQNKTNAKKTKKQPMMTQSNDIRTCFENITKKKKTFI 359
+ E + K+L T K+ K N+ + P I N+T +KK
Sbjct: 1283 DREVHGDLTGKRLRTKAEGSTGAKKRKRNSDVARNVPEGALLGFITAA--NLTVRKKNSK 1340
Query: 360 DFLTQSSGEPVSAMDDEV 377
T S + + + DD +
Sbjct: 1341 KKATTSRADGLDSDDDAI 1358
>gi|119189445|ref|XP_001245329.1| hypothetical protein CIMG_04770 [Coccidioides immitis RS]
gi|121921995|sp|Q1DY43.1|MPH1_COCIM RecName: Full=ATP-dependent DNA helicase MPH1
gi|392868234|gb|EAS33985.2| ATP-dependent DNA helicase MPH1 [Coccidioides immitis RS]
Length = 1110
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 171/306 (55%), Gaps = 32/306 (10%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEVS------KEDGSCPI-LGKDNDLQNLLQQLK 81
F V SLA A++ L +G+ FY NLV K+ G C + D + + L+ +L+
Sbjct: 595 FTVLASLAHAIDLLKYHGIGPFYRNLVSFEDSVLKEKKGGKCASQIVADGNFKVLMSKLR 654
Query: 82 PKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEK--GET------TKVIIFANYRVVV 133
+ ++E H K LR + +HF K G++ T+V+IF+++R
Sbjct: 655 -----SWTNTEEFIGHPKLEYLRRAILNHFLDAGGKNGGDSEGSDSNTRVMIFSHFRDSA 709
Query: 134 AEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
EI VL+ +P V+ +FVGQ S G+ Q+ Q E++ KF+ G +NT++ATS+GEEG
Sbjct: 710 EEIVRVLRKHQPFVRPHVFVGQANAKGSEGMDQKTQLEVVGKFKTGTYNTIVATSIGEEG 769
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYV 248
LDIGE+DL+IC+D SPI+M+QR+GRTGRKR G ++LL++G+E ++ + + + +
Sbjct: 770 LDIGEVDLIICYDGHSSPIRMLQRMGRTGRKRAGNIILLLSKGKEEESYSKAKDSYEK-M 828
Query: 249 EKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKKPKENEKANK 306
+++I + S + R++P + P K + I +++ ++ +P + +A K
Sbjct: 829 QQLIASGSRFTFHTDKSSRIVPQDIQPEAEEKMIEIPIEN----SQLGLPEPAKRSRAPK 884
Query: 307 KSKKKL 312
+ KK
Sbjct: 885 RPPKKF 890
>gi|326429449|gb|EGD75019.1| hypothetical protein PTSG_07244 [Salpingoeca sp. ATCC 50818]
Length = 2864
Score = 161 bits (407), Expect = 6e-37, Method: Composition-based stats.
Identities = 110/321 (34%), Positives = 172/321 (53%), Gaps = 43/321 (13%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILG----KDNDLQNLLQQ 79
+++ DF + SLA + L T+G+ FY ++ + + P LG K ++ N++ +
Sbjct: 293 VVEGDFAMAISLAYSCTMLRTHGVTPFYRSITSYLNGEKN-PRLGQQMKKSQEVMNMVAK 351
Query: 80 LK-----------------PKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTK 122
LK L + S + H K +L EI+ HFR K + T+
Sbjct: 352 LKKIVEGAIDTRAVFDGCVSSLCVGPPSCCRLYGHPKLEKLEEIVTKHFR--ETKHKDTR 409
Query: 123 VIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQ-------EQKEIMKKFRAGE 175
VI+F++YR V +I +VL +P+++ + FVGQ+SG ++ EQ ++ FRAG
Sbjct: 410 VIVFSSYRDSVVDIVNVLGKHKPLIRVASFVGQASGKSKSKKGQKQSEQIAVVSNFRAGV 469
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
NTL+AT VGEEGLDIG +DL+ICFD++ S +++QR+GRTGRKRNGR V LL +G E +
Sbjct: 470 HNTLVATCVGEEGLDIGHVDLIICFDSKGSSTRLIQRMGRTGRKRNGRIVQLLCEGSEVN 529
Query: 236 NFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTP----- 290
N++ S + + I+N + L + PRM+P T +++ K TP
Sbjct: 530 NYRRSTAASTNIRQAIVNAAKKF-QLYPHNPRMLPPGTTLQVR------KFSFTPITHDW 582
Query: 291 AKPSKKKPKENEKANKKSKKK 311
A PS+ PK+ K K+K
Sbjct: 583 APPSQDNPKQQGKQKAARKRK 603
>gi|46107330|ref|XP_380724.1| hypothetical protein FG00548.1 [Gibberella zeae PH-1]
Length = 1092
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 170/295 (57%), Gaps = 22/295 (7%)
Query: 18 NRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV-SKEDGSCP-------ILGK 69
N+ + M++ F V S+A +++ L +G++ FY+NLV++ S+++G L +
Sbjct: 414 NQGVQHMMRAVFTVLTSIAHSIKLLNFHGIKPFYDNLVDMRSEQEGKGEKGSKYRRQLVQ 473
Query: 70 DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANY 129
D++ Q ++ ++ + ++ H K L + + +HF +A T+VI+F+ Y
Sbjct: 474 DSNFQEMMDRIS-----KWLRTDGFVGHPKLAALADTVLNHFMDNATN-TATRVIVFSEY 527
Query: 130 RVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSV 184
R +I +L P++KA +FVGQ+ G+ Q +Q E + +F+ GEFN L+ATS+
Sbjct: 528 RDSAEDIVRMLNKHRPLIKARVFVGQADSKRGEGMKQAQQIEAIDRFKEGEFNVLVATSI 587
Query: 185 GEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTC 244
GEEGLDIG++DL++C+D+ SPI+M+QR+GRTGRK+ G+ V+LL +G+E F S
Sbjct: 588 GEEGLDIGQVDLIVCYDSSASPIRMLQRMGRTGRKQEGKIVLLLMRGKEEEQFAKSKDNY 647
Query: 245 KSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKK 297
+ ++ +I S ++ R++P P + + + I V++ P+ P KK
Sbjct: 648 EK-MQSLICEGSRFSFRFDLSTRIVPREFRPEVDMRRIDIPVENTQDPSLPEPKK 701
>gi|340522441|gb|EGR52674.1| predicted protein [Trichoderma reesei QM6a]
Length = 1096
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 156/276 (56%), Gaps = 14/276 (5%)
Query: 18 NRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNL- 76
N+ + M++ F V SLA +++ L +G++ FY+N+++ E G Q L
Sbjct: 414 NQGVQFMMRAIFSVLTSLAHSIKLLQFHGIKPFYDNMLDFRSEQEDKGEKGSKYKRQILD 473
Query: 77 ---LQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVV 133
Q++ K+ + + H K L + + +HF + GE+T+VI+F+ YR
Sbjct: 474 SPSFQEMMDKI-AGWLKMDGFVGHPKLTALADCVLNHF---MDNGESTRVIVFSEYRDSA 529
Query: 134 AEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
EI + P++KA++FVGQ+ G + Q++Q E +++F+ G +N L+ATS+GEEG
Sbjct: 530 EEIVRMFNAHRPLIKATVFVGQADGKRGEGMKQKQQIETIERFKTGAYNVLVATSIGEEG 589
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYV 248
LDIG++DL++C+D+ SPI+M+QR+GRTGRKR G +LL +G+E F S + +
Sbjct: 590 LDIGQVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIALLLMRGKEEEQFAKSKDNYEK-M 648
Query: 249 EKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVV 284
+++I S + R++P + P I H+ +
Sbjct: 649 QRLICEGSRFNFRFDLSTRIVPRDIRPEIDMRHVEI 684
>gi|170086129|ref|XP_001874288.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651840|gb|EDR16080.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1307
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 154/279 (55%), Gaps = 37/279 (13%)
Query: 34 SLASALENLVTYGLRSFYNNLVEVSK-----EDGSCPI-------LGKDNDLQNLLQQLK 81
+LA + L+T +R Y L E S+ ED L D + Q ++++L+
Sbjct: 475 TLARGMLYLLTGSIRMCYEWLEEASRNREDDEDADKGKKSSKGKSLRNDTNFQAVMRELE 534
Query: 82 PKLDINIMSSEYAWSHLKFIRLREILESHFRLHAE---------KGETTKVIIFANYRVV 132
S +H K +L+ IL HF E + + T+V++F+ +R
Sbjct: 535 ------TQRSRGFSTHPKMEKLKSILVQHFGTFLEDPGAKAGISEQDQTRVMVFSTHRGA 588
Query: 133 VAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGE 186
V +I + L+ P+++A+ F+GQ + G+ Q+EQ E++ KF+AGE+N L+AT +GE
Sbjct: 589 VDDIVEDLQKERPLIRAARFIGQGTDKQGNKGLVQREQLEVINKFKAGEYNVLVATCIGE 648
Query: 187 EGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKS 246
EGLDIGEID+ +C+DA K+P +MVQR GRTGRKR+G LL +GRE N + + T K
Sbjct: 649 EGLDIGEIDVTVCYDADKAPTRMVQRFGRTGRKRSGIVHALLAEGREEFNLEKAKGTYKE 708
Query: 247 YVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVK 285
V+K I +Y L + R+IP H+ P +CL V++
Sbjct: 709 -VQKTITRGELY-ELYADVERLIPDHIKP--ECLERVME 743
>gi|398401820|ref|XP_003853191.1| hypothetical protein MYCGRDRAFT_41278, partial [Zymoseptoria
tritici IPO323]
gi|339473073|gb|EGP88167.1| hypothetical protein MYCGRDRAFT_41278 [Zymoseptoria tritici IPO323]
Length = 963
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 165/308 (53%), Gaps = 35/308 (11%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPK 83
M+ F+V LA + L +G+ FY ++ KE S L K + +
Sbjct: 516 MLNAIFNVLSRLAHNVGLLKFHGVVPFYTGVLSFEKEVTSG--LTKSKTAAAIANS---E 570
Query: 84 LDINIMSSEYAWS-------HLKFIRLREILESHFRLHAEKG--------ETTKVIIFAN 128
+ +M + +W+ H K LRE++ +HF L A +G T+V++FA+
Sbjct: 571 PFVKMMGTIRSWTNNPDFIGHPKLEYLREVVLNHF-LDAGEGRQGSDVPPSATRVMVFAS 629
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATS 183
YR +I VLK EPM++ +FVGQ S G+ Q+ Q +++ F++G++N L+ATS
Sbjct: 630 YRDSTEDICRVLKRNEPMIRPHVFVGQAASKGSEGMDQKRQNAVIQDFKSGKYNCLVATS 689
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQT 243
+GEEGLDIG +DL++C+DA SPI+M+QR+GRTGRKR G+ +LL + +E ++ + Q
Sbjct: 690 IGEEGLDIGTVDLIVCYDASSSPIRMLQRIGRTGRKRVGQVRLLLMKDKEEKDYAKA-QD 748
Query: 244 CKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKE-NE 302
+Y++K I + S YA PR++P V P + R P +P + NE
Sbjct: 749 NYAYIQKTIADDSKYAYRDDQSPRILPREVKP-------IADKRPVDIPPENSQPIDLNE 801
Query: 303 KANKKSKK 310
+A K K
Sbjct: 802 RARKGRGK 809
>gi|320033351|gb|EFW15299.1| ATP-dependent DNA helicase MPH1 [Coccidioides posadasii str.
Silveira]
Length = 1104
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 168/306 (54%), Gaps = 32/306 (10%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEVS------KEDGSCPI-LGKDNDLQNLLQQLK 81
F V SLA A++ L +G+ FY NLV K+ G C + D + + L+ +L+
Sbjct: 589 FTVLASLAHAIDLLKYHGIGPFYRNLVSFEDSVLKEKKGGKCASQIVADGNFKVLMSKLR 648
Query: 82 PKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE--------TTKVIIFANYRVVV 133
+ ++E H K LR + +HF K + T+V+IF+++R
Sbjct: 649 -----SWTNTEEFIGHPKLEYLRRAILNHFLDAGGKNDGDSEGSDSNTRVMIFSHFRDSA 703
Query: 134 AEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
EI VL+ +P V+ +F+GQ S G+ Q+ Q E++ KF+ G +NT++ATS+GEEG
Sbjct: 704 EEIVRVLRKHQPFVRPHVFIGQANAKGSEGMDQKTQLEVVGKFKTGTYNTIVATSIGEEG 763
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYV 248
LDIGE+DL+IC+D SPI+M+QR+GRTGRKR G ++LL++G+E ++ + + +
Sbjct: 764 LDIGEVDLIICYDGHSSPIRMLQRMGRTGRKRAGNIILLLSKGKEEESYSKAKDNYEK-M 822
Query: 249 EKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKKPKENEKANK 306
+++I + S + R++P + P K + I +++ ++ +P + +A K
Sbjct: 823 QQLIASGSRFTFHTDKSSRIVPQDIQPEAEEKMIEIPIEN----SQLGLPEPAKRSRAPK 878
Query: 307 KSKKKL 312
+ KK
Sbjct: 879 RPPKKF 884
>gi|303323073|ref|XP_003071528.1| DEAD/DEAH box helicase domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111230|gb|EER29383.1| DEAD/DEAH box helicase domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1104
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 168/306 (54%), Gaps = 32/306 (10%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEVS------KEDGSCPI-LGKDNDLQNLLQQLK 81
F V SLA A++ L +G+ FY NLV K+ G C + D + + L+ +L+
Sbjct: 589 FTVLASLAHAIDLLKYHGIGPFYRNLVSFEDSVLKEKKGGKCASQIVADGNFKVLMSKLR 648
Query: 82 PKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE--------TTKVIIFANYRVVV 133
+ ++E H K LR + +HF K + T+V+IF+++R
Sbjct: 649 -----SWTNTEEFIGHPKLEYLRRAILNHFLDAGGKNDGDSEGSDSNTRVMIFSHFRDSA 703
Query: 134 AEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
EI VL+ +P V+ +F+GQ S G+ Q+ Q E++ KF+ G +NT++ATS+GEEG
Sbjct: 704 EEIVRVLRKHQPFVRPHVFIGQANAKGSEGMDQKTQLEVVGKFKTGTYNTIVATSIGEEG 763
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYV 248
LDIGE+DL+IC+D SPI+M+QR+GRTGRKR G ++LL++G+E ++ + + +
Sbjct: 764 LDIGEVDLIICYDGHSSPIRMLQRMGRTGRKRAGNIILLLSKGKEEESYSKAKDNYEK-M 822
Query: 249 EKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKKPKENEKANK 306
+++I + S + R++P + P K + I +++ ++ +P + +A K
Sbjct: 823 QQLIASGSRFTFHTDKSSRIVPQDIQPEAEEKMIEIPIEN----SQLGLPEPAKRSRAPK 878
Query: 307 KSKKKL 312
+ KK
Sbjct: 879 RPPKKF 884
>gi|119497161|ref|XP_001265345.1| helicase, putative [Neosartorya fischeri NRRL 181]
gi|189082435|sp|A1D4V5.1|MPH1_NEOFI RecName: Full=ATP-dependent DNA helicase MPH1
gi|119413507|gb|EAW23448.1| helicase, putative [Neosartorya fischeri NRRL 181]
Length = 1111
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 177/329 (53%), Gaps = 34/329 (10%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEV-SKEDGSCP-----ILGKDNDLQNLLQQLKP 82
F V SLA A++ L +G+ FY +L+ S DG + +D + L+ L+P
Sbjct: 570 FTVLASLAHAIDLLKYHGITPFYRHLLHFQSNTDGQKGGKYQRQIVQDESFKKLMNHLQP 629
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE-----------TTKVIIFANYRV 131
+ E+ H K L++++ +HF ++GE T+++IF ++R
Sbjct: 630 W----TKNPEFI-GHPKLEYLKQVVLNHF---MDRGEGTAANGDQSQSATRIMIFVHFRD 681
Query: 132 VVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGE 186
E+ VLK EP+++ +FVGQSS G+ Q+ Q I++KF+ G +NT++ATS+GE
Sbjct: 682 SAEEVVRVLKRYEPLIRPHVFVGQSSAKGSEGMDQKTQLSIVQKFKKGTYNTIVATSIGE 741
Query: 187 EGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKS 246
EGLDIGE+DL++C+D+ SPI+M+QR+GRTGRKR G V+LL QG+E ++ + +
Sbjct: 742 EGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLLLMQGKEEESYIKAKDNYEK 801
Query: 247 YVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANK 306
++++I + + + PR++P V P + I + T A +P++ + K
Sbjct: 802 -MQQMIASGTRFTFHDDTSPRILPPGVRPVAEKRQIDIPVENTQA--DLPEPRKRARPPK 858
Query: 307 KSKKKLETDGNSEPA-GKQNKTNAKKTKK 334
+ KK + E K + K TKK
Sbjct: 859 RPPKKFHMPDDVETGFAKASSLTGKVTKK 887
>gi|169603375|ref|XP_001795109.1| hypothetical protein SNOG_04697 [Phaeosphaeria nodorum SN15]
gi|160706381|gb|EAT88457.2| hypothetical protein SNOG_04697 [Phaeosphaeria nodorum SN15]
Length = 1275
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 169/289 (58%), Gaps = 19/289 (6%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDG 62
A++K++ + H N+ + M+ F + S++ A++ L +G+ FY L E KE
Sbjct: 551 ARNKWISEAGR--HANQGVKSMVNAVFTILASISQAMDLLKYHGMGPFYVKLKEFKKESD 608
Query: 63 SCPILGKDNDLQN-LLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGET- 120
+ L + Q+L +L + + H K L++++ HF ++A G+
Sbjct: 609 KSKSKYRKQILDSESFQKLMVRLQGWVTDDNFV-GHPKLEFLQQVILDHF-VNAGNGDNV 666
Query: 121 -------TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEIM 168
T++++FA++R EI +LK EPM++ +FVGQS+G ++Q+EQ E +
Sbjct: 667 EGAPPSQTRIMVFAHFRDSAEEISRILKRHEPMIRPRVFVGQSTGKNSEGMSQKEQLEAI 726
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
++F+ G FNTLIATS+GEEGLDIGE+DL+IC+D++ SPI+M+QR+GRTGRKR G+ V+L
Sbjct: 727 EQFKQGTFNTLIATSIGEEGLDIGEVDLIICYDSKASPIRMLQRMGRTGRKRQGKIVMLQ 786
Query: 229 TQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
QG+E ++ + + + ++++I + + + R++P V P +
Sbjct: 787 MQGKEENDANKAKDSYEK-MQELIAKGTHFTFHDEISRRILPPDVKPAV 834
>gi|195058057|ref|XP_001995378.1| GH23128 [Drosophila grimshawi]
gi|193899584|gb|EDV98450.1| GH23128 [Drosophila grimshawi]
Length = 1294
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 156/293 (53%), Gaps = 31/293 (10%)
Query: 28 DFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDIN 87
+F + SL ALE L +GLR F NN + + G ++ +D L++L++Q++ +L N
Sbjct: 326 NFAMCISLYYALELLERHGLRVFVNNFE--ADDKGHEKLVLRDAALRDLVEQVRQELGAN 383
Query: 88 I---------------MSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVV 132
M + + H K+ + R++L HF +E ++ I+F YR
Sbjct: 384 PLDHSTHTMTNGQVAPMPATLDFGHPKYEQARQVLLQHFESQSE----SRAIVFCEYRES 439
Query: 133 VAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGE 186
V I +L P+++ FVGQSS +TQ+EQ ++M FR G N L+ATS+ E
Sbjct: 440 VMLIQRLLLQHRPLLRPRCFVGQSSNGVGICALTQKEQLQVMGDFRGGICNVLVATSIAE 499
Query: 187 EGLDIGEIDLVICFDAQKS-PIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCK 245
EGLD+GE+DL++CFD S P + VQR+GRTGRK+ G V+L+T+GRE + + +
Sbjct: 500 EGLDVGEVDLIVCFDISSSNPTRFVQRIGRTGRKKQGAVVMLVTEGREQQLLKEVLASRD 559
Query: 246 SYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
K+ + I A+L + PR++P PR + + + TPAK P
Sbjct: 560 QTNRKLHTSTLIKASLYPHAPRLVPPQFHPRCEQRFM---EAATPAKSKTPSP 609
>gi|189082537|sp|Q0CWI2.2|MPH1_ASPTN RecName: Full=ATP-dependent DNA helicase mph1
Length = 1100
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 183/347 (52%), Gaps = 43/347 (12%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEV-SKEDGSCP-----ILGKDNDLQNLLQQLKP 82
F V SLA ++ L +G+ FY +L+ DG + +D + L+ L P
Sbjct: 581 FTVLASLAHGIDLLKYHGITPFYRHLLHFQGNTDGQKGGKYQRQIVQDEHFKKLMNHLSP 640
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE---------TTKVIIFANYRVVV 133
+ E+ H K L++++ +HF + A +G TT+V+IF ++R
Sbjct: 641 W----TKNPEFI-GHPKLEYLKQVVLNHF-MDAGEGSAGAEGASQSTTRVMIFVHFRDSA 694
Query: 134 AEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
E+ VLK EPM++ +FVGQ+S G+ Q+ Q +++KF+ G +NT++ATS+GEEG
Sbjct: 695 EEVARVLKRYEPMIRPQVFVGQASAKGSDGMNQKTQLGVVQKFKQGTYNTIVATSIGEEG 754
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY- 247
LDIGE+DL++C+D+ SPI+M+QR+GRTGRKR G V+LL +G+E ++ ++ +Y
Sbjct: 755 LDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLLLMEGKEEESY---IKAKDNYE 811
Query: 248 -VEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHI-VVKDRVTPAKPSKKKPKENEKAN 305
++++I + + + PR++P V P + HI + ++ A P +PK +
Sbjct: 812 KMQQMIASGTRFTFHDDKSPRILPPGVKPIVDKRHIDIPEENEEQALP---EPKRRGRVP 868
Query: 306 KKSKKKLETDGN--------SEPAGKQNKTNAKKTKKQPMMTQSNDI 344
KK KK N S AG +T K K + + DI
Sbjct: 869 KKPPKKFHMPDNVITGFTKASSLAGGSKRTAQDKRKARTPTPEPVDI 915
>gi|162312400|ref|NP_593348.2| ATP-dependent 3' to 5' DNA helicase [Schizosaccharomyces pombe
972h-]
gi|121919048|sp|Q9UT23.2|MFH1_SCHPO RecName: Full=ATP-dependent DNA helicase mfh1; AltName: Full=FancM
homolog protein 1
gi|85663622|emb|CAB57423.2| ATP-dependent 3' to 5' DNA helicase, FANCM ortholog Fml1
[Schizosaccharomyces pombe]
Length = 834
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 174/318 (54%), Gaps = 34/318 (10%)
Query: 3 AKDKYVKSKAQ-FPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKED 61
AK ++ Q FP N+ D I F + A L L+ +G+R FY L EV +E
Sbjct: 319 AKQAFLAMSGQNFP-ANQKWD--ILNTFDALATFAYPLNLLLNHGIRPFYQKLREVEEE- 374
Query: 62 GSCPILGKDNDLQNLL--QQLKPKLD-INIMSSEYAW-SHLKFIRLREILESHFRLHAEK 117
C +G+ + ++ + +P +D I I+ + ++ H K L I+ +F E+
Sbjct: 375 --C-FVGRSGYKKRIINHENYRPLMDDIEILLRDQSFVGHPKLEHLERIVTEYF--EKEQ 429
Query: 118 GETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFR 172
+ T+++IF R EI L P V+ ++F+GQS+ G++Q+ Q E +K+F+
Sbjct: 430 TKDTRIMIFVEIRSSAEEILRFLGKFYPNVRPAIFIGQSAVRKAAGMSQKLQNETVKQFQ 489
Query: 173 AGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGR 232
GE NTLIATS+GEEGLDIGE+D++IC+DA SPI+M+QR+GRTGRKR G +LLT+G+
Sbjct: 490 KGEVNTLIATSIGEEGLDIGEVDMIICYDASASPIRMLQRMGRTGRKRKGYIYMLLTRGK 549
Query: 233 EAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAK 292
E ++ + ++ + I++ + + +L++ R++P P V RV
Sbjct: 550 EEAKWERAKDAYRTLQDNIVSGRGL--SLSEKSYRILPEKFRP-------VCDKRVI--- 597
Query: 293 PSKKKPKENEKANKKSKK 310
+ PKENE+ KK
Sbjct: 598 ---EIPKENEEVVVAPKK 612
>gi|358387248|gb|EHK24843.1| hypothetical protein TRIVIDRAFT_30360 [Trichoderma virens Gv29-8]
Length = 1094
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 154/280 (55%), Gaps = 22/280 (7%)
Query: 18 NRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLL 77
N+ + M++ F V SLA +++ L +G++ FY+N+V+ E GK
Sbjct: 413 NQGVQFMMRAIFSVLTSLAHSIKLLQFHGIKPFYDNMVDFRSEQE-----GKGEKGSKYR 467
Query: 78 QQLKPKLDINIMSSEYA-W-------SHLKFIRLREILESHFRLHAEKGETTKVIIFANY 129
+Q+ M + A W H K L + + +HF + GE T+VI+F+ Y
Sbjct: 468 RQIIDSTSFQEMMDKIAGWLKLDGFVGHPKLTALADCVLNHF---MDNGEGTRVIVFSEY 524
Query: 130 RVVVAEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSV 184
R EI + P++KA++FVGQ+ G + Q++Q + +++F+ G +N L+ATS+
Sbjct: 525 RDSAEEIVRMFNTHRPLIKATVFVGQADGKRGEGMKQKQQIDTIERFKTGAYNVLVATSI 584
Query: 185 GEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTC 244
GEEGLDIG++DL++C+D+ SPI+M+QR+GRTGRKR G +LL +G+E F S
Sbjct: 585 GEEGLDIGQVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIALLLMRGKEEEQFAKSKDNY 644
Query: 245 KSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVV 284
+ ++++I S + R++P + P + H+ +
Sbjct: 645 EK-MQQLICEGSRFNFRFDLSTRIVPRDIRPEVDMRHVEI 683
>gi|115387249|ref|XP_001211130.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195214|gb|EAU36914.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 918
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 170/310 (54%), Gaps = 31/310 (10%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEV-SKEDGSCPI-----LGKDNDLQNLLQQLKP 82
F V SLA ++ L +G+ FY +L+ DG + +D + L+ L P
Sbjct: 581 FTVLASLAHGIDLLKYHGITPFYRHLLHFQGNTDGQKGGKYQRQIVQDEHFKKLMNHLSP 640
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE---------TTKVIIFANYRVVV 133
+ E+ H K L++++ +HF + A +G TT+V+IF ++R
Sbjct: 641 W----TKNPEFI-GHPKLEYLKQVVLNHF-MDAGEGSAGAEGASQSTTRVMIFVHFRDSA 694
Query: 134 AEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
E+ VLK EPM++ +FVGQ+S G+ Q+ Q +++KF+ G +NT++ATS+GEEG
Sbjct: 695 EEVARVLKRYEPMIRPQVFVGQASAKGSDGMNQKTQLGVVQKFKQGTYNTIVATSIGEEG 754
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYV 248
LDIGE+DL++C+D+ SPI+M+QR+GRTGRKR G V+LL +G+E ++ + + +
Sbjct: 755 LDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLLLMEGKEEESYIKAKDNYEK-M 813
Query: 249 EKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHI-VVKDRVTPAKPSKKKPKENEKANKK 307
+++I + + + PR++P V P + HI + ++ A P +PK + KK
Sbjct: 814 QQMIASGTRFTFHDDKSPRILPPGVKPIVDKRHIDIPEENEEQALP---EPKRRGRVPKK 870
Query: 308 SKKKLETDGN 317
KK N
Sbjct: 871 PPKKFHMPDN 880
>gi|426248444|ref|XP_004017973.1| PREDICTED: Fanconi anemia group M protein [Ovis aries]
Length = 2043
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 182/326 (55%), Gaps = 37/326 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 341 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 396
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSS--------------EYAWSHLKF 100
DG+ + L ++ D L L +S ++ +SH K
Sbjct: 397 DGTKGMTRVRNELSRNADFMKLYDHLDSMFAHTRSTSASGISAIQKGGKDKKFCYSHPKL 456
Query: 101 IRLREILESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +K + T+V+IF+++R V EI ++L P +P+++ FVG
Sbjct: 457 KKLEEVVVEHFKSWNAQKTSDKKCDETRVMIFSSFRDSVQEIAEMLLPHQPVIRVMTFVG 516
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR+G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++
Sbjct: 517 HASGKSMKGFTQKEQLEVVKQFRSGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRL 576
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
+QR+GRTGR+R GR V++L +GRE + S +S + I N+ + + + PRM+
Sbjct: 577 IQRMGRTGRRRQGRIVVILAEGREERTYNQSQCNKRSIYKAISGNRQVL-HFYQGSPRMV 635
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSK 295
P V P++ + + P KPS+
Sbjct: 636 PDEVNPQLHKM-FITHGVYEPEKPSR 660
>gi|396471223|ref|XP_003838820.1| hypothetical protein LEMA_P024930.1 [Leptosphaeria maculans JN3]
gi|312215389|emb|CBX95341.1| hypothetical protein LEMA_P024930.1 [Leptosphaeria maculans JN3]
Length = 1323
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 173/320 (54%), Gaps = 40/320 (12%)
Query: 16 HINRDLDRMIQRDFHVTHSLASALENLVTYGLRSF------YNNLVEVSKEDGSCPILGK 69
H N+ + ++ F + S++ +E L +G+ F + N + SK IL
Sbjct: 609 HANQGVKSIVHAVFAILSSISQGMELLKYHGIGPFHVKMKDFQNESQKSKSKYRKQILDS 668
Query: 70 DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGET--------T 121
D + L+ +L+ M+ + H K L+E + HF +AE G T
Sbjct: 669 DA-WKKLMSRLQ-----GWMTDDNFVGHPKMEYLQEAILEHF-ANAEDGHNANGASSSQT 721
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEF 176
+V++FAN+R EI +LK EPM++ +FVGQ S G+TQ++Q ++++KF++G +
Sbjct: 722 RVMVFANFRDSTDEIARILKRHEPMIRPRVFVGQAAGKNSEGMTQKDQLDVIEKFKSGVY 781
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHN 236
NTLIATS+GEEGLDIGE+DL+IC+D++ SPI+M+QR+GRTGRKR G+ ++L G+E ++
Sbjct: 782 NTLIATSIGEEGLDIGEVDLIICYDSKASPIRMLQRMGRTGRKREGKIIMLQMNGKEEND 841
Query: 237 FQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKK 296
+ + + ++++I S + R++P V P VV RV P
Sbjct: 842 ANKAKDSYEK-MQELIAKGSHFNFHDDKSRRILPPDVKP-------VVDRRVVEIPPENS 893
Query: 297 K------PKENEKANKKSKK 310
+ PK+ ++ K KK
Sbjct: 894 QYDWLPEPKKGRRSKKPPKK 913
>gi|408399476|gb|EKJ78577.1| hypothetical protein FPSE_01243 [Fusarium pseudograminearum CS3096]
Length = 1093
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 169/295 (57%), Gaps = 22/295 (7%)
Query: 18 NRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV-SKEDGSCP-------ILGK 69
N+ + M++ F V S+A +++ L +G++ FY+NL ++ S+++G L +
Sbjct: 414 NQGVQHMMRAVFTVLTSIAHSIKLLNFHGIKPFYDNLADMRSEQEGKGEKGSKYKRQLVQ 473
Query: 70 DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANY 129
D++ Q ++ ++ + ++ H K L + + +HF +A T+VI+F+ Y
Sbjct: 474 DSNFQEMMDRIS-----KWLRTDGFVGHPKLAALADTVLNHFMDNA-ANTATRVIVFSEY 527
Query: 130 RVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSV 184
R +I +L P++KA +FVGQ+ G+ Q +Q E + +F+ GEFN L+ATS+
Sbjct: 528 RDSAEDIVRMLNKHRPLIKARVFVGQADSKRGEGMKQAQQIEAIGRFKEGEFNVLVATSI 587
Query: 185 GEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTC 244
GEEGLDIG++DL++C+D+ SPI+M+QR+GRTGRK+ G+ V+LL +G+E F S
Sbjct: 588 GEEGLDIGQVDLIVCYDSSASPIRMLQRMGRTGRKQEGKIVLLLMRGKEEEQFARSKDNY 647
Query: 245 KSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKK 297
+ ++ +I S ++ R++P P + + + I +++ P+ P KK
Sbjct: 648 EK-MQSLICEGSRFSFRFDLSTRIVPREFRPEVDMRRIDIPIENTQDPSLPEPKK 701
>gi|156056669|ref|XP_001594258.1| hypothetical protein SS1G_04065 [Sclerotinia sclerotiorum 1980]
gi|189082206|sp|A7EFH4.1|MPH1_SCLS1 RecName: Full=ATP-dependent DNA helicase mph1
gi|154701851|gb|EDO01590.1| hypothetical protein SS1G_04065 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1235
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 175/311 (56%), Gaps = 32/311 (10%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNL------VEVSKEDGSCP-ILGKDNDLQNL 76
M+ F V S+ A++ L +G+ F++N+ VE +K+ G + + + +
Sbjct: 531 MMNALFTVLTSMGHAIKLLNFHGIGPFFSNIKDFRAEVEGNKKGGKYKNQIVNSPEFKKM 590
Query: 77 LQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKG--------ETTKVIIFAN 128
+++++ ++ E H K L + + +HF L A G +T+VI+F
Sbjct: 591 MERIQ-----GWINKEDFIGHPKLTYLCDTVLNHF-LDAGAGLMGDNMPPSSTRVIVFTE 644
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATS 183
YR +I VL PM++AS+FVGQS G+ Q++Q E ++KF+AG N ++ATS
Sbjct: 645 YRDSAEDIARVLNKHGPMIRASVFVGQSDSKRSEGMNQEKQLETIRKFKAGGINVIVATS 704
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQT 243
+GEEGLDIGE+DL++C+D+ SPI+M+QR+GRTGRKR G+ V+LL +G+E +++ S
Sbjct: 705 IGEEGLDIGEVDLIVCYDSSSSPIRMLQRMGRTGRKRAGKIVLLLMRGKEEDSYKKSKDN 764
Query: 244 CKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKKPKEN 301
+ ++++I++ S + R+IP V P + + + I +++ P+ P +PK
Sbjct: 765 YEQ-IQRMISSGSRFTFRHDLSARIIPRKVKPEVDKRFIEIPLENTQDPSLP---EPKRR 820
Query: 302 EKANKKSKKKL 312
K KK KK
Sbjct: 821 AKPRKKLAKKF 831
>gi|213405465|ref|XP_002173504.1| helicase C-terminal domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212001551|gb|EEB07211.1| helicase C-terminal domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 794
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 175/320 (54%), Gaps = 31/320 (9%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDG 62
AK K++ + Q N+ D + D VT A L L+ +G+ FY+ L E+ +E
Sbjct: 321 AKQKFLATAGQSYTNNQRWDVLNTFDALVT--FAYPLGLLLYHGITPFYSKLKEIQEECS 378
Query: 63 SCPILGKDNDLQNLLQQLKPKLDINIMSSEYAW-------SHLKFIRLREILESHFRLHA 115
G+ + +L K I++MS + H K L+EI+ +HF
Sbjct: 379 K----GRAGYKKRVLHDQKF---IDLMSEMSCYISQPDFLGHPKLEHLQEIVLNHF---- 427
Query: 116 EKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS----GVTQQEQKEIMKKF 171
+ + T++++FA R EI +L P V++++FVGQS+ G++Q+ Q E ++KF
Sbjct: 428 GENKDTRIMVFAEIRSSAEEIHRLLSRNSPTVRSAIFVGQSAKKAGGMSQKLQNETVQKF 487
Query: 172 RAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
GE NTLIATS+GEEGLDIGE+DL+IC+DA SPI+M+QR+GRTGRKR G +LLT+G
Sbjct: 488 HEGEINTLIATSIGEEGLDIGEVDLIICYDASSSPIRMLQRMGRTGRKREGNVSMLLTRG 547
Query: 232 REAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPA 291
+E + + + + E + + I L+ R++P P +C+ V++ P
Sbjct: 548 KEENKWARAKDAYRVIQENVSSGNGIV--LSDKSYRILPKQYNP--ECVKKVIE---IPK 600
Query: 292 KPSKKKPKENEKANKKSKKK 311
+ + K EN+ A +++ KK
Sbjct: 601 ENIESKSVENKVATRRNGKK 620
>gi|154323886|ref|XP_001561257.1| hypothetical protein BC1G_00342 [Botryotinia fuckeliana B05.10]
Length = 1170
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 157/275 (57%), Gaps = 27/275 (9%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGK-------DNDLQNL 76
M+ F V S+ A++ L +G+ F++N+ + E GK D D + +
Sbjct: 478 MMNALFTVLTSMGHAIKILNFHGIGPFFSNIKDFRAEVEGNKKGGKYKNQVVNDPDFKKM 537
Query: 77 LQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGET--------TKVIIFAN 128
+ +++ + ++ E H K L + + +HF L A G T T+VI+F
Sbjct: 538 MDRIQ-----SWINKEEFIGHPKLTHLCDTVLNHF-LDAGAGLTGDNMPPSSTRVIVFTE 591
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATS 183
YR +I VL PM+KAS+FVGQS G+ Q++Q E ++KF+AG N ++ATS
Sbjct: 592 YRDSAEDIARVLNKHGPMIKASVFVGQSDSKRSEGMNQEKQLETIRKFKAGGINVIVATS 651
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQT 243
+GEEGLDIGE+DL++C+D+ SPI+M+QR+GRTGRKR G+ V+LL +G+E +++ S
Sbjct: 652 IGEEGLDIGEVDLIVCYDSSSSPIRMLQRMGRTGRKRAGKIVLLLMRGKEEDSYKKSKDN 711
Query: 244 CKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIK 278
+ ++++I++ S + R+IP V P ++
Sbjct: 712 YEQ-MQRMISSGSRFTFRHDLSARIIPRDVKPEVE 745
>gi|317026087|ref|XP_001388951.2| ATP-dependent DNA helicase mph1 [Aspergillus niger CBS 513.88]
gi|189082535|sp|A2Q8R2.2|MPH1_ASPNC RecName: Full=ATP-dependent DNA helicase mph1
Length = 1124
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 172/313 (54%), Gaps = 33/313 (10%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLV------EVSKEDGSCPILGKDNDLQNLLQQLKP 82
F V SLA ++ L +G+ FY +L+ E K + +D + L+ L+P
Sbjct: 592 FTVLASLAHGIDLLKYHGITPFYRHLLHFQSNTEGQKGGKYQRQVVQDESYKKLMNHLQP 651
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE---------TTKVIIFANYRVVV 133
+ E+ H K L++++ +HF + A +G T+V+IF ++R
Sbjct: 652 W----TKNPEFI-GHPKLEYLKQVVLNHF-MDAGEGSGADENKDQPATRVMIFVHFRDSA 705
Query: 134 AEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
E+ VLK EPM++ +FVGQSS G+ Q+ Q +I++KF+ G +NT++ATS+GEEG
Sbjct: 706 EEVTRVLKRYEPMIRPHVFVGQSSAKGSEGMGQKTQLDIVQKFKKGTYNTIVATSIGEEG 765
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY- 247
LDIGE+DL++C+D+ SPI+M+QR+GRTGRKR+G+ +LL QG+E ++ ++ +Y
Sbjct: 766 LDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRSGKITLLLMQGKEEESY---IKAKDNYE 822
Query: 248 -VEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANK 306
++++I + + + PR++P V P I + + T +PK +A K
Sbjct: 823 KMQQMIASGTRFTFHDDMSPRILPPGVRPVADKRAIDIPEENTVR--DLPEPKRRGRAPK 880
Query: 307 KSKKKLETDGNSE 319
+ KK N E
Sbjct: 881 RPPKKFHMPDNVE 893
>gi|409044027|gb|EKM53509.1| hypothetical protein PHACADRAFT_125288 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1460
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 154/264 (58%), Gaps = 32/264 (12%)
Query: 67 LGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKG-------- 118
GKD LQ ++ +L+ ++ + +H K +L+ +L HF A+KG
Sbjct: 551 FGKDEKLQQIVAELE---RMHARPGGFG-AHPKMEKLKTLLVEHF---AQKGFEAEGHGA 603
Query: 119 ------ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS------SGVTQQEQKE 166
++V++F ++R V I D L P+++A F+GQ G Q+EQ E
Sbjct: 604 GDGELNSDSRVMVFTSFRQSVELITDALNKDRPLIRAVPFIGQGVDKHGKKGYGQKEQLE 663
Query: 167 IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVI 226
I+K+F+AGEFN L++TS+GEEGLDIGEID++ C+DAQK+PI+M+QR+GRTGRKR+G +
Sbjct: 664 IIKRFKAGEFNVLVSTSIGEEGLDIGEIDMIACYDAQKTPIRMLQRIGRTGRKRDGYVHV 723
Query: 227 LLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVK- 285
LL++ RE N++ + K I+ +++ L ++ R+IP H+ P +C+ +V+
Sbjct: 724 LLSEEREERNWEKADDNYKDVQRFILRAEAL--ELYEDVERLIPEHIKP--ECIEMVMDI 779
Query: 286 DRVTPAKPSKKKPKENEKANKKSK 309
+ P K+K + KA K+++
Sbjct: 780 EEYVREDPEKRKLESLPKAKKRAR 803
>gi|189082538|sp|A6RIS1.2|MPH1_BOTFB RecName: Full=ATP-dependent DNA helicase mph1
gi|347829953|emb|CCD45650.1| similar to gi|189082538|sp|A6RIS1.2|MPH1_BOTFB RecName:
Full=ATP-dependent DNA helicase mph1 [Botryotinia
fuckeliana]
Length = 1229
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 157/275 (57%), Gaps = 27/275 (9%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGK-------DNDLQNL 76
M+ F V S+ A++ L +G+ F++N+ + E GK D D + +
Sbjct: 537 MMNALFTVLTSMGHAIKILNFHGIGPFFSNIKDFRAEVEGNKKGGKYKNQVVNDPDFKKM 596
Query: 77 LQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGET--------TKVIIFAN 128
+ +++ + ++ E H K L + + +HF L A G T T+VI+F
Sbjct: 597 MDRIQ-----SWINKEEFIGHPKLTHLCDTVLNHF-LDAGAGLTGDNMPPSSTRVIVFTE 650
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATS 183
YR +I VL PM+KAS+FVGQS G+ Q++Q E ++KF+AG N ++ATS
Sbjct: 651 YRDSAEDIARVLNKHGPMIKASVFVGQSDSKRSEGMNQEKQLETIRKFKAGGINVIVATS 710
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQT 243
+GEEGLDIGE+DL++C+D+ SPI+M+QR+GRTGRKR G+ V+LL +G+E +++ S
Sbjct: 711 IGEEGLDIGEVDLIVCYDSSSSPIRMLQRMGRTGRKRAGKIVLLLMRGKEEDSYKKSKDN 770
Query: 244 CKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIK 278
+ ++++I++ S + R+IP V P ++
Sbjct: 771 YEQ-MQRMISSGSRFTFRHDLSARIIPRDVKPEVE 804
>gi|195124341|ref|XP_002006652.1| GI18468 [Drosophila mojavensis]
gi|193911720|gb|EDW10587.1| GI18468 [Drosophila mojavensis]
Length = 1373
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 153/277 (55%), Gaps = 28/277 (10%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPK 83
+I +F + SL ALE L +GLR F NN + E+G + KD L+ L+++++ +
Sbjct: 326 LIVSNFAMCISLYHALELLERHGLRVFVNNFD--ADENGRDKFVLKDPALRELVEKVRQE 383
Query: 84 LDINIMS-SEYA--------------WSHLKFIRLREILESHFRLHAEKGETTKVIIFAN 128
L N + S +A + H K+ + R++L +HF H + ++ I+F
Sbjct: 384 LGANPLEHSTHAMTNGQVAPLPASLDFGHPKYEQARQVLLTHFESHPD----SRAIVFCE 439
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQSSG------VTQQEQKEIMKKFRAGEFNTLIAT 182
YR V I +L P+++ FVGQSSG +TQ+EQ +IM FR G N L+AT
Sbjct: 440 YRESVMLIQRLLLQHRPVLRPRCFVGQSSGTNGICALTQKEQLQIMSDFRQGVSNVLVAT 499
Query: 183 SVGEEGLDIGEIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
S+GEEGLD+GE++L++CFD +P + VQR+GRTGR++ G V+L+T GRE + +
Sbjct: 500 SIGEEGLDVGEVELIVCFDICSSNPTRFVQRIGRTGRQKKGDVVMLVTDGREQQLLKEML 559
Query: 242 QTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIK 278
K++ + + + L + PR++P PR +
Sbjct: 560 ANKDQMNRKLLQSTLVKSALYPHSPRLVPPQFHPRCE 596
>gi|358366851|dbj|GAA83471.1| ATP-dependent DNA helicase Mph1 [Aspergillus kawachii IFO 4308]
Length = 1130
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 175/327 (53%), Gaps = 30/327 (9%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLV------EVSKEDGSCPILGKDNDLQNLLQQLKP 82
F V SLA ++ L +G+ FY +L+ E K + +D + L+ L+P
Sbjct: 598 FTVLASLAHGIDLLKYHGITPFYRHLLHFQSNTEGQKGGKYQRQVVQDESYKKLMNHLQP 657
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE---------TTKVIIFANYRVVV 133
+ E+ H K L++++ +HF + A +G T+V+IF ++R
Sbjct: 658 W----TKNPEFI-GHPKLEYLKQVVLNHF-MDAGEGSGADENKDQPATRVMIFVHFRDSA 711
Query: 134 AEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
E+ VLK EPM++ +FVGQSS G+ Q+ Q +I++KF+ G +NT++ATS+GEEG
Sbjct: 712 EEVTRVLKRYEPMIRPHVFVGQSSAKGSEGMGQKTQLDIVQKFKKGTYNTIVATSIGEEG 771
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYV 248
LDIGE+DL++C+D+ SPI+M+QR+GRTGRKR G+ +LL QG+E ++ + + +
Sbjct: 772 LDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRAGKITLLLMQGKEEESYIKAKDNYEK-M 830
Query: 249 EKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKS 308
+++I + + + PR++P V P I + + T +PK +A K+
Sbjct: 831 QQMIASGTRFTFHDDMSPRILPPGVRPVADKRAIDIPEENTVR--DLPEPKRRGRAPKRP 888
Query: 309 KKKLETDGNSEPAGKQNKTNAKKTKKQ 335
KK N E G +N T K+
Sbjct: 889 PKKFHMPDNVE-TGFTTASNLAGTSKR 914
>gi|350638094|gb|EHA26450.1| hypothetical protein ASPNIDRAFT_171821 [Aspergillus niger ATCC
1015]
Length = 858
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 170/311 (54%), Gaps = 29/311 (9%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLV------EVSKEDGSCPILGKDNDLQNLLQQLKP 82
F V SLA ++ L +G+ FY +L+ E K + +D + L+ L+P
Sbjct: 326 FTVLASLAHGIDLLKYHGITPFYRHLLHFQSNTEGQKGGKYQRQVVQDESYKKLMNHLQP 385
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE---------TTKVIIFANYRVVV 133
+ E+ H K L++++ +HF + A +G T+V+IF ++R
Sbjct: 386 WTK----NPEFI-GHPKLEYLKQVVLNHF-MDAGEGSGADENKDQPATRVMIFVHFRDSA 439
Query: 134 AEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
E+ VLK EPM++ +FVGQSS G+ Q+ Q +I++KF+ G +NT++ATS+GEEG
Sbjct: 440 EEVTRVLKRYEPMIRPHVFVGQSSAKGSEGMGQKTQLDIVQKFKKGTYNTIVATSIGEEG 499
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYV 248
LDIGE+DL++C+D+ SPI+M+QR+GRTGRKR+G+ +LL QG+E ++ + + +
Sbjct: 500 LDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRSGKITLLLMQGKEEESYIKAKDNYEK-M 558
Query: 249 EKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKS 308
+++I + + + PR++P V P I + + T +PK +A K+
Sbjct: 559 QQMIASGTRFTFHDDMSPRILPPGVRPVADKRAIDIPEENTVR--DLPEPKRRGRAPKRP 616
Query: 309 KKKLETDGNSE 319
KK N E
Sbjct: 617 PKKFHMPDNVE 627
>gi|403178013|ref|XP_003336442.2| hypothetical protein PGTG_17854 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173301|gb|EFP92023.2| hypothetical protein PGTG_17854 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1464
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 154/258 (59%), Gaps = 14/258 (5%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPI-LGKDNDLQNLLQQLKPK 83
++ + V +A+A+ L+ Y + Y + E+ +E G C + ++L+ +++
Sbjct: 521 LRPNLAVLSKMATAMAKLLEYSITLAYEKMQELKEESGKCAAGVCSQVGYKSLMTEIR-- 578
Query: 84 LDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPL 143
++ S H K +++ + F ++G++++V+IF ++R +V +I + L
Sbjct: 579 ---DLTQSPDFVPHPKMEKMKALTLEFFINAQDQGKSSRVMIFCHFRDMVTDIVNYLNQE 635
Query: 144 EPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLV 197
+P++KAS FVGQS+ G+ Q+ Q E +++F+ EFN L+ATS+GEEGLDIG +D +
Sbjct: 636 KPIIKASAFVGQSNDVRGNRGMNQKTQNETIQRFKNNEFNVLVATSIGEEGLDIGALDFI 695
Query: 198 ICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSI 257
IC++AQKSP++M+QRLGRTGR +G+ ++L+ +GRE N++ + + +++ K +
Sbjct: 696 ICYEAQKSPLRMLQRLGRTGRNEDGKVIVLIAEGREDKNWEKAQDQYQHVQNALLSKKVL 755
Query: 258 YANLAKNGPRMIPAHVTP 275
L ++ R++P V P
Sbjct: 756 --ELYEDCERLVPEGVRP 771
>gi|134055054|emb|CAK43695.1| unnamed protein product [Aspergillus niger]
Length = 884
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 170/311 (54%), Gaps = 29/311 (9%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLV------EVSKEDGSCPILGKDNDLQNLLQQLKP 82
F V SLA ++ L +G+ FY +L+ E K + +D + L+ L+P
Sbjct: 352 FTVLASLAHGIDLLKYHGITPFYRHLLHFQSNTEGQKGGKYQRQVVQDESYKKLMNHLQP 411
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE---------TTKVIIFANYRVVV 133
+ E+ H K L++++ +HF + A +G T+V+IF ++R
Sbjct: 412 WTK----NPEFI-GHPKLEYLKQVVLNHF-MDAGEGSGADENKDQPATRVMIFVHFRDSA 465
Query: 134 AEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
E+ VLK EPM++ +FVGQSS G+ Q+ Q +I++KF+ G +NT++ATS+GEEG
Sbjct: 466 EEVTRVLKRYEPMIRPHVFVGQSSAKGSEGMGQKTQLDIVQKFKKGTYNTIVATSIGEEG 525
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYV 248
LDIGE+DL++C+D+ SPI+M+QR+GRTGRKR+G+ +LL QG+E ++ + + +
Sbjct: 526 LDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRSGKITLLLMQGKEEESYIKAKDNYEK-M 584
Query: 249 EKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKS 308
+++I + + + PR++P V P I + + T +PK +A K+
Sbjct: 585 QQMIASGTRFTFHDDMSPRILPPGVRPVADKRAIDIPEENTVR--DLPEPKRRGRAPKRP 642
Query: 309 KKKLETDGNSE 319
KK N E
Sbjct: 643 PKKFHMPDNVE 653
>gi|70990412|ref|XP_750055.1| DEAD box helicase Mph1 [Aspergillus fumigatus Af293]
gi|74669967|sp|Q4WKB5.1|MPH1_ASPFU RecName: Full=ATP-dependent DNA helicase mph1
gi|189082420|sp|B0XMV6.1|MPH1_ASPFC RecName: Full=ATP-dependent DNA helicase mph1
gi|66847687|gb|EAL88017.1| DEAD box helicase Mph1, putative [Aspergillus fumigatus Af293]
gi|159130535|gb|EDP55648.1| DEAD box helicase Mph1, putative [Aspergillus fumigatus A1163]
Length = 1101
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 154/276 (55%), Gaps = 45/276 (16%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEV-SKEDGSCP-----ILGKDNDLQNLLQQLKP 82
F V SLA A++ L +G+ FY +L+ S DG + +D + L+ L+P
Sbjct: 560 FTVLASLAHAIDLLKYHGITPFYRHLLHFQSNTDGQKGGKYQRQIVQDESFKKLMNHLQP 619
Query: 83 KLDINIMSSEYAWS-------HLKFIRLREILESHFRLHAEKGE-----------TTKVI 124
W+ H K L++++ +HF ++GE T+++
Sbjct: 620 ------------WTKNPDFIGHPKLEYLKQVVLNHF---MDRGEGTAANGDQSQSATRIM 664
Query: 125 IFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTL 179
IF ++R E+ VLK EP+++ +FVGQSS G+ Q+ Q I++KF+ G +NT+
Sbjct: 665 IFVHFRDSAEEVVRVLKRHEPLIRPHVFVGQSSAKGSEGMDQKTQLSIVQKFKKGTYNTI 724
Query: 180 IATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
+ATS+GEEGLDIGE+DL++C+D+ SPI+M+QR+GRTGRKR G V+LL QG+E ++
Sbjct: 725 VATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLLLMQGKEEESYIK 784
Query: 240 SMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTP 275
+ + ++++I + + + PR++P V P
Sbjct: 785 AKDNYEK-MQQMIASGTRFTFHDDKSPRILPPGVRP 819
>gi|407929506|gb|EKG22324.1| Helicase [Macrophomina phaseolina MS6]
Length = 1389
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 153/273 (56%), Gaps = 33/273 (12%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVS--------KEDGSCPILGKDNDLQN 75
M+ F ++ L +G+R FY L + KE + P K L N
Sbjct: 778 MVNAMFEALMGFGRGIDVLKYHGIRPFYRILCDYKTEATTKWKKEITNNPNFEK---LLN 834
Query: 76 LLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGET---TKVIIFANYRVV 132
LL++ K S+Y H K LRE + +HF L AE+G TKV++FA++R
Sbjct: 835 LLREWTAK-------SDYI-GHPKLEYLREYVLNHF-LDAEEGSDASQTKVMVFAHWRDS 885
Query: 133 VAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEE 187
+I VLK PM++ +FVGQ S + Q+ Q+E++K+F+AG +NTL+ATS+GEE
Sbjct: 886 AEDIVRVLKLNGPMIRPHVFVGQAATKTSEAMDQKRQEEVVKQFKAGVYNTLVATSIGEE 945
Query: 188 GLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY 247
GLDIGE+DL++C+D + SPI+M+QR+GRTGRKR G+ ++L +G+E + + +
Sbjct: 946 GLDIGEVDLIVCYDQKASPIRMLQRMGRTGRKRRGKILLLQMEGKEESDAIKARDAYEKM 1005
Query: 248 VEKIINNKS--IYANLAKNGPRMIPAHVTPRIK 278
EKI + +LA+ R++P + P ++
Sbjct: 1006 QEKISRGDEFRFHTDLAR---RIVPREINPVVE 1035
>gi|320168067|gb|EFW44966.1| hypothetical protein CAOG_02972 [Capsaspora owczarzaki ATCC 30864]
Length = 1972
Score = 157 bits (396), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/199 (41%), Positives = 125/199 (62%), Gaps = 6/199 (3%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGE 175
T+V+IF+ +R V EI D L +P+V+A FVGQ S G+TQ++Q IM+ FR+G+
Sbjct: 567 TRVMIFSEFRESVQEIIDALADQQPVVRAMAFVGQATTKGSKGLTQEQQLRIMRAFRSGD 626
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
+NTL++TSVGEEGLD+G +DL++CFD+Q SP +MVQR+GRTGRKR G+ V+LL +G EA
Sbjct: 627 YNTLVSTSVGEEGLDVGHVDLIVCFDSQASPTRMVQRMGRTGRKREGQIVMLLYEGAEAL 686
Query: 236 NFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSK 295
+Q S++ KS V+ ++ + + PRMIP P+ + D + A P
Sbjct: 687 AYQKSVERQKS-VQDVLERQIKSFVMYPTPPRMIPLKFVPKATKTVVKTTDFLHNASPMS 745
Query: 296 KKPKENEKANKKSKKKLET 314
++ E + +K+ T
Sbjct: 746 RRRMLREASRNAAKEAAGT 764
>gi|395334142|gb|EJF66518.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1297
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 142/236 (60%), Gaps = 25/236 (10%)
Query: 97 HLKFIRLREILESHF--RL------HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVK 148
H K LR +L HF RL A GE+ + ++F ++R V EI ++L P+++
Sbjct: 490 HPKMDVLRTLLIDHFAQRLPDDTDGGARAGES-RAMVFVSFRECVEEIVELLNKESPIIR 548
Query: 149 ASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDA 202
A F+GQ + G Q+EQ E++++F+AG++N L++TS+GEEGLDIGE+DL++C+DA
Sbjct: 549 AKPFIGQGTDKQGKKGYAQKEQLEVIEQFKAGKYNVLVSTSIGEEGLDIGEVDLIVCYDA 608
Query: 203 QKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKS---IYA 259
QK+PI+M+QR+GRTGRK +G ILL QGRE N+Q + Q+ + V+ I S +Y
Sbjct: 609 QKTPIRMLQRIGRTGRKASGTVHILLAQGREEQNWQKA-QSNYANVQHFIVRASDLEVYG 667
Query: 260 NLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKKLETD 315
++ R++P + P + + + ++ + +PS+K N + K K+ D
Sbjct: 668 DVD----RLLPPDIEPECREMEMEIEPYIREERPSRK--GSNATGSPKGPKRKRND 717
>gi|194207332|ref|XP_001915885.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein
[Equus caballus]
Length = 2127
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 185/331 (55%), Gaps = 38/331 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I + +I+ +F + SL E L G+RS Y L +
Sbjct: 412 ILARDQFRKNPS--PNI-VGIQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 466
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKLDINIMSSE--------------YAWSHLKF 100
DG+ + L ++ D L L+ +S + +SH K
Sbjct: 467 DGTKGMTRAKNELSRNEDFMALYNHLEGMFAQTQGASAGGTSATQKGDKDKTFFYSHPKL 526
Query: 101 IRLREILESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HF+ +K + T+V+IF+++R V EI ++L +PM++ FVG
Sbjct: 527 KKLEEVVVDHFKSWNAQNASEKKCDKTRVMIFSSFRDSVQEIAEMLLQHQPMIRVMTFVG 586
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++K+FR+G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++
Sbjct: 587 HASGKSMKGFTQKEQLEVVKQFRSGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRL 646
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
+QR+GRTGR+R GR V++L +GRE + S +S + I +N+ + + + PRM+
Sbjct: 647 IQRMGRTGRRRQGRIVVILAEGREERTYNQSQSNKRSIYKAISSNRQVL-HFYQGSPRMV 705
Query: 270 PAHVTPRIKCLHIVVKDRVTPAKPSKKKPKE 300
P V P + + + + P K S+ P+E
Sbjct: 706 PDGVNPELHKM-FIAQSVYQPEKRSRNLPRE 735
>gi|301786799|ref|XP_002928821.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein-like
[Ailuropoda melanoleuca]
Length = 2048
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 178/314 (56%), Gaps = 35/314 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 338 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIM-- 393
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL------DINIMSS-------EYAWSHLKFI 101
DG+ + L ++ D L L+ N S+ ++ +SH K
Sbjct: 394 DGTKGMTRAKNELSRNEDFMKLYNHLECMFAHTRGTSANGFSTIQKGDKKKFFYSHPKLK 453
Query: 102 RLREILESHFR------LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ 155
+L E++ HF+ A+K + T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 454 KLEEVVVEHFKSWNTQNTSAKKCDETRVMIFSSFRDSVQEIAEMLLQHQPVIRVMTFVGH 513
Query: 156 SSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
+SG TQ+EQ E++K+FR+G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++V
Sbjct: 514 ASGKSMKGFTQKEQLEVVKQFRSGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLV 573
Query: 211 QRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIP 270
QR+GRTGR+R GR V++L +GRE + S +S + I N+ + + + PRM+P
Sbjct: 574 QRMGRTGRRRQGRIVVILAEGREERTYNQSQSNKRSIYKAISGNRQVL-HFYQGSPRMVP 632
Query: 271 AHVTPRIKCLHIVV 284
+ P + + I
Sbjct: 633 VGINPELHKMFITC 646
>gi|384498802|gb|EIE89293.1| hypothetical protein RO3G_14004 [Rhizopus delemar RA 99-880]
Length = 1138
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 161/273 (58%), Gaps = 18/273 (6%)
Query: 18 NRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGK-----DND 72
N++L ++ F + SL+ + E L +G+ F +L + +E GK N
Sbjct: 326 NKNLMFLVVSTFLMAESLSRSYELLCAHGVAPFLESLELIMEELEEKKQTGKKLTVPQNT 385
Query: 73 LQN--LLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYR 130
N ++++L +L + ++ H K RL IL SHF + E G+ +KV+IF+++R
Sbjct: 386 FYNNSVVRRLIEELTQKLQRPDFV-GHPKMERLLSILISHFD-NLEHGKASKVMIFSSFR 443
Query: 131 VVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSV 184
V +I +L +P+++A+ FVGQ++ G+ Q EQ+++++KF++ +N L++TS+
Sbjct: 444 SSVMDICRILSRHQPLIRATYFVGQATSKKGAKGLKQTEQQDVIQKFKSDNYNVLVSTSI 503
Query: 185 GEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTC 244
GEEGLDIGE+DL+IC+D+Q SPI+M+QR+GRTGR+R G+C++L+T+ E Q
Sbjct: 504 GEEGLDIGEVDLIICYDSQTSPIRMLQRMGRTGRQRRGKCILLMTESEEKKFAQAKDAYA 563
Query: 245 KSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
K ++++I + K P ++P + P I
Sbjct: 564 K--IQRLITQPGM-ITYHKPNPAVLPPNYKPTI 593
>gi|328874050|gb|EGG22416.1| ATP-dependent RNA helicase [Dictyostelium fasciculatum]
Length = 1558
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 141/274 (51%), Gaps = 35/274 (12%)
Query: 31 VTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKL-DINIM 89
V +L L+ +GL F N L + C D+ LL KL D N+
Sbjct: 581 VLRALLDCSNELIKHGLVCFKNKLKIFADNTKKCYKETLDSTYWKLLVSKTQKLIDENVY 640
Query: 90 SSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKA 149
H K I+L +++ESHF +T+V++F YR V+EI L P +K
Sbjct: 641 -------HDKLIKLGQVIESHF---VSSTTSTRVMVFTEYRDSVSEIISYLGN-NPSIKV 689
Query: 150 SMFVGQSSG-----------------VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIG 192
F+GQS+G + Q EQ ++K+FR GE+NTL++TS+GEEGLD G
Sbjct: 690 MPFLGQSNGKVVKGPKGTTRTVGSKGLDQSEQASVLKRFRDGEYNTLVSTSIGEEGLDFG 749
Query: 193 EIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKII 252
E+DL++C+D +S + +QR+GRTGRKR GRCV++LTQG+E + S K ++K+
Sbjct: 750 EVDLIVCYDTPQSTTRNIQRMGRTGRKRQGRCVVILTQGQEVDAYNMS----KEKLDKLG 805
Query: 253 NNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKD 286
N Y PRMIP P + I V+D
Sbjct: 806 GNPINYTYYQ--SPRMIPKGFNPIEELKEINVED 837
>gi|328853782|gb|EGG02918.1| hypothetical protein MELLADRAFT_38323 [Melampsora larici-populina
98AG31]
Length = 554
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 157/260 (60%), Gaps = 30/260 (11%)
Query: 35 LASALENLVTYGLRSFYNNLVEVSKED-----GSCPILGKDNDLQNLLQQLK-------P 82
+A + L+ Y + + + E+ E G C ++G + L ++ + ++ P
Sbjct: 290 MAYVMAKLLEYSIPIAHEKMAELKHEPSKAAKGLCSLVGYKSLLYDIEEMMRFPTFSPHP 349
Query: 83 KLD-INIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK 141
K+D + + E+ FI + E + + +K T+++++F N+R VV +I D L
Sbjct: 350 KMDKMKALIIEF------FIGVSERQKGQ---NKDKQGTSRLMVFCNFRDVVTDIVDYLN 400
Query: 142 PLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEID 195
+P++KAS F+GQ + G+TQ++Q E+++KF+A EFN L+ATS+GEEGLDIG +D
Sbjct: 401 MEQPLIKASAFIGQGTDTKGNRGMTQKQQAEVIRKFKADEFNVLVATSIGEEGLDIGALD 460
Query: 196 LVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNK 255
+IC++AQKSP++M+QRLGRTGR +G+ ++L++QGRE N++ + + +V+ + +K
Sbjct: 461 CIICYEAQKSPLRMLQRLGRTGRNEDGKVIVLMSQGREELNWEKAKDQYQ-HVQNALLSK 519
Query: 256 SIYANLAKNGPRMIPAHVTP 275
++ L + R+IP V P
Sbjct: 520 TVL-ELFDDCERLIPEGVRP 538
>gi|238588435|ref|XP_002391725.1| hypothetical protein MPER_08804 [Moniliophthora perniciosa FA553]
gi|215456784|gb|EEB92655.1| hypothetical protein MPER_08804 [Moniliophthora perniciosa FA553]
Length = 674
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 110/169 (65%), Gaps = 14/169 (8%)
Query: 124 IIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFN 177
++F R V EI + P+++AS F+GQ + G+ Q+EQ E++KKF+AGEFN
Sbjct: 1 MVFVTNREAVEEIVQAMDAHRPLLRASRFIGQGTDVRGQKGLAQKEQLEVIKKFKAGEFN 60
Query: 178 TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNF 237
L+ATS+GEEGLDIGE+DL+IC+DAQK+PI+M+QRLGRTGRKR G +LL + RE NF
Sbjct: 61 VLVATSIGEEGLDIGEVDLIICYDAQKTPIRMLQRLGRTGRKRAGIVHVLLAEDREEQNF 120
Query: 238 QTSMQTCKSYVEKIINNK--SIYANLAKNGPRMIPAHVTPRI--KCLHI 282
+ + K + I+ + Y ++ R++P HV P+ KC+ I
Sbjct: 121 EKAKLQYKEVQKSIVRGDQLTFYDDVE----RLLPDHVRPQCVEKCMEI 165
>gi|395323127|gb|EJF55624.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1239
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 132/216 (61%), Gaps = 21/216 (9%)
Query: 97 HLKFIRLREILESHFRLHAE-------KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKA 149
H K LR +L HF + + ++ ++F ++R V EI ++L P+++A
Sbjct: 478 HPKMDVLRTLLIDHFNQSSPDDADGGARASESRAMVFVSFRECVEEIVELLNKESPIIRA 537
Query: 150 SMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQ 203
F+GQ G Q+EQ E++++F+AG++N L++TS+GEEGLDIGE+DL++C+DAQ
Sbjct: 538 KPFIGQGKDKQGKKGYAQKEQLEVIEQFKAGKYNVLVSTSIGEEGLDIGEVDLIVCYDAQ 597
Query: 204 KSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKS---IYAN 260
K+PI+M+QR+GRTGRK +G ILL QGRE N+Q + Q+ + V+ I S +Y +
Sbjct: 598 KTPIRMLQRIGRTGRKASGTVHILLAQGREEQNWQKA-QSSYANVQHFIVRASDLKVYGD 656
Query: 261 LAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKK 296
+ R++P + P + + + ++ + +PS+K
Sbjct: 657 VD----RLLPPDIEPECREMEMEIEPYIREERPSRK 688
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 79/131 (60%), Gaps = 10/131 (7%)
Query: 188 GLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY 247
GLDIGE+DL++C+DAQK+PI+M+QR+GRTGRK +G ILL QGRE N+Q + Q+ +
Sbjct: 694 GLDIGEVDLIVCYDAQKTPIRMLQRIGRTGRKASGTVHILLAQGREEQNWQKA-QSSYAN 752
Query: 248 VEKIINNKS---IYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKA 304
V+ I S +Y ++ R++P + P + + + ++ + +PS+K N
Sbjct: 753 VQHFIVRASDLKVYGDVD----RLLPPDIEPECREMEMEIEPYIREERPSRK--GSNATG 806
Query: 305 NKKSKKKLETD 315
+ K K+ D
Sbjct: 807 SPKGPKRKRND 817
>gi|425766774|gb|EKV05372.1| DEAD box helicase Mph1, putative [Penicillium digitatum Pd1]
gi|425775427|gb|EKV13699.1| DEAD box helicase Mph1, putative [Penicillium digitatum PHI26]
Length = 1108
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 145/275 (52%), Gaps = 41/275 (14%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEVSKED--------GSCPILGKDNDLQNLLQQL 80
F V SLA A++ L +G+ FY ++V + +D + LL L
Sbjct: 566 FTVLASLAHAIDLLKYHGIVPFYRHVVHFKSNSEGQKGGGGKYQKQVVQDESFKKLLSHL 625
Query: 81 KPKLDINIMSSEYAWS-------HLKFIRLREILESHFRLHAEKGE--------TTKVII 125
+P WS H K L+ ++ +HF E E T+V+I
Sbjct: 626 EP------------WSKNPEFIGHPKLEYLKSVILNHFMDRGEGKEVSDGTSQPATRVMI 673
Query: 126 FANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLI 180
F ++R E+ VLK EPM++ +FVGQSS G+ Q+ Q I+ F+ G +NT++
Sbjct: 674 FVHFRDSAEEVTRVLKRYEPMIRPHVFVGQSSAKGSEGMDQKTQLRIIDDFKKGTYNTIV 733
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
ATS+GEEGLDIGE+DL++CFD+ SPI+M+QR+GRTGRKR G +LL +G+E ++ +
Sbjct: 734 ATSIGEEGLDIGEVDLIVCFDSSASPIRMLQRMGRTGRKRAGNITLLLMKGKEEDSYNKA 793
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTP 275
+ ++++I + S + R++PA + P
Sbjct: 794 KDNYEK-MQQMIASGSRFTFHDDRSARILPAGIRP 827
>gi|302697553|ref|XP_003038455.1| hypothetical protein SCHCODRAFT_34853 [Schizophyllum commune H4-8]
gi|300112152|gb|EFJ03553.1| hypothetical protein SCHCODRAFT_34853, partial [Schizophyllum
commune H4-8]
Length = 533
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 108/161 (67%), Gaps = 8/161 (4%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS------SGVTQQEQKEIMKKFRAG 174
++V++F +R V EI D L P+++A+ FVGQ G+ Q+EQ ++KF+AG
Sbjct: 374 SRVMVFVTFREAVEEIVDALNFERPLIRATKFVGQGLDKKGGKGLAQKEQLATVEKFKAG 433
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREA 234
E+N L+ATS+GEEGLDIGE+DL++C+DAQK+PI+M+QRLGRTGRKR G +LL +GRE
Sbjct: 434 EYNVLVATSIGEEGLDIGEVDLIVCYDAQKTPIRMLQRLGRTGRKRAGVVHVLLAEGREE 493
Query: 235 HNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTP 275
N + + + K + I +S+ L + RM+P H+ P
Sbjct: 494 LNLEKAKEAYKHVQQSITRGESL--ELYADVDRMLPDHIKP 532
>gi|440465547|gb|ELQ34866.1| helicase C-terminal domain protein [Magnaporthe oryzae Y34]
Length = 1079
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 179/352 (50%), Gaps = 51/352 (14%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKED- 61
A+ ++K +F N+ L M+ F + SLA A++ L +G+R FY+NLV E
Sbjct: 386 ARQDWMKGPGRF--ANQGLKMMLMAIFTILQSLAHAIKLLNYHGIRPFYDNLVAFRSETE 443
Query: 62 -----GS---CPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRL 113
GS ++G+ + Q ++ L I+ + H K L + L +HF +
Sbjct: 444 DKGQKGSKYKRQLIGEQS-FQEMMDLASKWLKIDGFAG-----HPKLTHLCDNLLNHF-M 496
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRA 173
A +G +T+VI+F+ YR EI VL +PM+ AS+FV
Sbjct: 497 DAGEGSSTRVIVFSEYRDSAEEITRVLNVHKPMISASLFV------------------EM 538
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
G FN L+ATS+GEEGLDIG++DL+IC+DA SPI+M+QR+GRTGRKR G+ +LL +G+E
Sbjct: 539 GIFNVLVATSIGEEGLDIGQVDLIICYDASSSPIRMLQRMGRTGRKRAGKITLLLMKGKE 598
Query: 234 AHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPA 291
N+ + Q ++K+I S + R++P V P + + + I +++ +
Sbjct: 599 EDNYAKA-QDNYEKMQKLICEGSRFNFRHDLSSRIVPRDVKPEVDKRMVEIPIENTQDTS 657
Query: 292 KPSKKKPKENEKANKKSKKK-------LETDGNSEPAGKQNKTNAKKTKKQP 336
P +PK KK+ KK +ET NS +A KTK +P
Sbjct: 658 LP---EPKARSTRGKKASKKKFNMPDGVETGFNS--VASMLGISASKTKAKP 704
>gi|347963300|ref|XP_310969.5| AGAP000169-PA [Anopheles gambiae str. PEST]
gi|333467265|gb|EAA06209.5| AGAP000169-PA [Anopheles gambiae str. PEST]
Length = 1326
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 171/337 (50%), Gaps = 45/337 (13%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCP-----ILGKDNDLQNLLQQ 79
I DF+ + A+E LV +G+R+ N L+ + KD ++ L +
Sbjct: 348 IVSDFYACIGMYHAIELLVKHGIRALLNYLLGSGGGSNGPNAQEKYFIAKDRQIKQFLDR 407
Query: 80 LK-------------PKLDIN-----IMSSEYAWSHLKFIRLREILESHFRLHAEKGETT 121
LK P +N + + + H K+ L + L+ FR H + +
Sbjct: 408 LKDQFPQHAQRGQESPAALLNESGALTGNDDADYGHPKYRILEKHLKGFFREHPD----S 463
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG----VTQQEQKEIMKKFRAGEFN 177
+ I+F +R VA I +L +P ++A+ VGQ S V QQEQ +++++FRAG N
Sbjct: 464 RAIVFCEFRDSVAMIKRLLSDNQPAIRANCIVGQGSANGVRVPQQEQIDVIRQFRAGTIN 523
Query: 178 TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNF 237
TLIAT V EEG+D+GE+DL++CFD K+P + VQR+GRTGR+R GR ++L+T+G E
Sbjct: 524 TLIATCVAEEGIDVGEVDLIVCFDIAKNPTRFVQRVGRTGRQRVGRVLMLVTEGEEHETL 583
Query: 238 QTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKK 297
+ + + +++ +K I L ++ PR++P + P KC+ + + V P + +
Sbjct: 584 KQVLASKDRTNQQLARSKEILRVLYRSSPRLVPHGLEP--KCMKVNMA--VLPERDDRCG 639
Query: 298 PKENEKANKKSKKKLETDGNSEPAGKQNKTNAKKTKK 334
P +++ +DG G +N +K+K+
Sbjct: 640 PHDSDS----------SDGEGSLVGTGAGSNRRKSKR 666
>gi|393218545|gb|EJD04033.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 1263
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 166/337 (49%), Gaps = 51/337 (15%)
Query: 2 LAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENL------VTY-GLRSFYNNL 54
LA K K++ F ++ V SLA A+ NL V Y L+ NL
Sbjct: 486 LATSKSAKARWMFSYL------------RVLGSLARAMGNLMESSVSVCYRSLKDLKENL 533
Query: 55 VEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLH 114
K D L ++ D L+++ + + + H K L EI+ HF
Sbjct: 534 KSGEKNDDKEVNLLRNPDFIKLMEECERQQALGFAP------HPKMKALVEIIMDHFNTP 587
Query: 115 AEKGET-------------TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS----- 156
ET TKV+IF R V+ E+ DVL +PM++A+ FVGQ
Sbjct: 588 PSNPETPAPGESTEAASSSTKVMIFVGLREVIDEVVDVLDQYKPMLRATRFVGQGIDKKG 647
Query: 157 -SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
G+ Q +Q E ++KF+ GE+N L++TSVGEEGLDIGEID +IC+D+ KS I+M+QR+GR
Sbjct: 648 KKGLAQAKQLETIQKFKDGEYNILVSTSVGEEGLDIGEIDRIICYDSSKSSIQMLQRVGR 707
Query: 216 TGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTP 275
TGRKR G +LL + RE N+ S + + II+ + L + R++P ++ P
Sbjct: 708 TGRKRTGYVDVLLAEEREERNWDKSKENYADVQDTIISGNQL--ELYTDAERLLPDNIEP 765
Query: 276 RIKCLHIVVK-DRVTPAKPSKKKPKENEKANKKSKKK 311
CL I + ++ P +K P + A K +K+
Sbjct: 766 --SCLQITMPIEKYMPD--TKDSPARGKGATVKKRKR 798
>gi|406866127|gb|EKD19167.1| putative ATP-dependent DNA helicase mph1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1189
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 162/292 (55%), Gaps = 21/292 (7%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV--SKEDGSCPILGKDNDLQNLLQQLK 81
M+ F + S+A +++ L +G+ FY + E ED P K Q+ + K
Sbjct: 526 MMNALFSILGSVAHSIKLLNFHGIGPFYEAIKEFQHGSEDSKKPSKYKTQITQS--PEFK 583
Query: 82 PKLDINIMS--SEYAWSHLKFIRLREILESHFRLHAEK--GE-----TTKVIIFANYRVV 132
+DI +S + + H K L + + +HF E GE +T+VI+FA YR
Sbjct: 584 KMMDIIHLSRSKDDSVGHPKLTHLCDTILNHFMDAGEGRLGEDAPPSSTRVIVFAEYRDS 643
Query: 133 VAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEE 187
EI VL P+V+AS+FVGQ S G+ Q +Q+E + F+ G+FN L+ATS+GEE
Sbjct: 644 AEEIARVLNRHGPLVRASVFVGQADSKRSEGMNQAKQQETINFFKTGKFNVLVATSIGEE 703
Query: 188 GLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY 247
GLDIG++DL++C+DA SPI+M+QR+GRTGRKR G V+LL +G+E F+ + +
Sbjct: 704 GLDIGQVDLIVCYDASGSPIRMLQRMGRTGRKRAGHIVLLLMRGKEEDAFRKAKDNYEQ- 762
Query: 248 VEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIVVKDRVTPAKPSKKK 297
++K+I++ + R++P V P + + + I ++ PA P ++
Sbjct: 763 MQKMISSGERFRFRHDLSVRIVPREVNPVVDKRQIEIPFENTQGPALPEPRR 814
>gi|449017481|dbj|BAM80883.1| similar to ATP-dependent RNA helicase [Cyanidioschyzon merolae
strain 10D]
Length = 1770
Score = 153 bits (387), Expect = 1e-34, Method: Composition-based stats.
Identities = 105/320 (32%), Positives = 170/320 (53%), Gaps = 22/320 (6%)
Query: 1 MLAKDKYVKS--KAQFPHIN--RDLDRMIQRDFHVTHSLASALENLVTYGL----RSFYN 52
++A+ +++++ + Q ++N R L + RDF L+ ++E L + GL R
Sbjct: 429 VIAQRRWIEASRRQQTSNVNASRTLPVALFRDFAHALLLSRSVELLRSQGLGTCVRYLEQ 488
Query: 53 NLVEVSKEDGSCP-ILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHF 111
+K + P L + ++LQ L ++K L E+ H K R +E++ HF
Sbjct: 489 ERTAQAKGNPRSPNELTRRSELQELHLRVKQLL-------EHGTRHPKIERCKELVVQHF 541
Query: 112 RLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS-SGVTQQEQKEIMKK 170
H +T+V+IF YR VVAE+ L P V+ + F+GQ+ SG+TQ +Q IM+
Sbjct: 542 LRHGSSA-STRVMIFVQYRDVVAELEAALSQAAPTVRPASFIGQANSGMTQADQHRIMRL 600
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
FR G N L++TS+GEEGLDIG +DL+I FDA SPI+M+QR+GRT R R G+ ++L+++
Sbjct: 601 FRQGALNCLVSTSIGEEGLDIGHVDLIISFDALGSPIRMLQRMGRTARARAGQVIVLVSE 660
Query: 231 GREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTP 290
E+ F+ + E + + S + K P M+PA P I+C V+ P
Sbjct: 661 SAESQRFEEMNRRANGIAETLRDKYSKF-KFFKESPLMLPAEGQP-IRCQ--VLPLTAMP 716
Query: 291 AKPSKKKPKENEKANKKSKK 310
A S+ + E + S +
Sbjct: 717 ALESQSQEPERPRGEAGSTQ 736
>gi|354503753|ref|XP_003513945.1| PREDICTED: Fanconi anemia group M protein homolog, partial
[Cricetulus griseus]
Length = 1914
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 176/314 (56%), Gaps = 36/314 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ +F + SL E L G+RS Y L +
Sbjct: 252 ILARDQFRKNPS--PNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLSGIM-- 307
Query: 61 DGSCPI------LGKDNDLQNLLQQLKP---------KLDINIM-----SSEYAWSHLKF 100
DG+ + LG++ D L L+ +D + + +SH K
Sbjct: 308 DGTKGMTRARNELGRNEDFMKLYNHLESVFAHVRDPSAIDASAFKKGNKEKNFFYSHPKL 367
Query: 101 IRLREILESHFRLHAEKGET------TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+L E++ HFR K T T+V+IF+++R V EI ++L +P+++ FVG
Sbjct: 368 KKLEEVIIEHFRSWNAKNTTGKKCLETRVMIFSSFRDSVEEIAEMLLQHQPVIRVMTFVG 427
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+SG TQ+EQ E++++FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++
Sbjct: 428 HASGKNTKGFTQKEQLEVVRQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRL 487
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
+QR+GRTGR+R GR V++L++GRE + S Q+ K + K I+ + + PRM+
Sbjct: 488 IQRMGRTGRRRQGRIVVILSEGREERTYNQS-QSNKRNIYKAISGNRQVLHFYQGSPRMV 546
Query: 270 PAHVTPRIKCLHIV 283
P + P + + I
Sbjct: 547 PEKINPELHKMFIT 560
>gi|255951308|ref|XP_002566421.1| Pc22g25350 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593438|emb|CAP99823.1| Pc22g25350 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1109
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 166/315 (52%), Gaps = 53/315 (16%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEVSKED--------GSCPILGKDNDLQNLLQQL 80
F V SLA A++ L +G+ FY +++ + +D+ + LL L
Sbjct: 567 FTVLASLAHAIDLLKYHGIVPFYRHIIHFKSSSEGQKGGGGKYQKQVVQDDSFKKLLSHL 626
Query: 81 KPKLDINIMSSEYAWS-------HLKFIRLREILESHFRLHAEKGE--------TTKVII 125
+P WS H K L+ ++ +HF E E T+V+I
Sbjct: 627 EP------------WSKNPEFIGHPKLEYLKSVILNHFMDRGEGKELPNGTSQPATRVMI 674
Query: 126 FANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLI 180
F ++R E+ VLK EPM++ +FVGQSS G+ Q+ Q +I++ F+ G +NT++
Sbjct: 675 FVHFRDSAEEVTRVLKRYEPMIRPHVFVGQSSAKGSEGMDQKTQLKIIEDFKKGTYNTIV 734
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
ATS+GEEGLDIGE+DL++C+D+ SPI+M+QR+GRTGRKR G +LL +G+E ++
Sbjct: 735 ATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRKRAGNITLLLMKGKEEDSY--- 791
Query: 241 MQTCKSY--VEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKK-- 296
++ +Y ++++I + S + R++P+ V P H+ + P + S++
Sbjct: 792 IKAKDNYEKMQQMIASGSRFTFHDDRSARILPSGVRPVPDKRHVDI-----PPENSQQEL 846
Query: 297 -KPKENEKANKKSKK 310
+PK +A K+ K
Sbjct: 847 PEPKRKGRAPKRPAK 861
>gi|15219634|ref|NP_174785.1| fanconi anemia group M protein [Arabidopsis thaliana]
gi|332193685|gb|AEE31806.1| fanconi anemia group M protein [Arabidopsis thaliana]
Length = 1324
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 138/229 (60%), Gaps = 18/229 (7%)
Query: 1 MLAKDKYVKSK-AQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSK 59
++A+DK+ ++ PH+N ++ F +L + L ++G+R Y L E K
Sbjct: 359 LMARDKFRQAPLPGLPHVNHG---DVESCFAALITLYHIRKLLSSHGIRPAYEMLEEKLK 415
Query: 60 EDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE 119
E ++ K+ D++ ++ +L S K ++ EIL HF++ K
Sbjct: 416 EGPFARLMSKNEDIRMTKLLMQQRLSHGAPSP-------KLSKMLEILVDHFKVKDPK-- 466
Query: 120 TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVT-----QQEQKEIMKKFRAG 174
T++VIIF+N+R V +I + L + MVKA+ F+GQSSG T Q+ Q+ +++KFRAG
Sbjct: 467 TSRVIIFSNFRGSVRDIMNALSNIGDMVKATEFIGQSSGKTLKGQSQKIQQAVLEKFRAG 526
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGR 223
FN ++ATS+GEEGLDI E+DLVICFDA SP++M+QR+GRTGRK NGR
Sbjct: 527 GFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRKNNGR 575
>gi|195380381|ref|XP_002048949.1| GJ21324 [Drosophila virilis]
gi|194143746|gb|EDW60142.1| GJ21324 [Drosophila virilis]
Length = 1366
Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats.
Identities = 102/310 (32%), Positives = 165/310 (53%), Gaps = 34/310 (10%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPK 83
+I +F + SL A+E L +GLR F NN + E G + KD L+ L++ ++ +
Sbjct: 327 LIVSNFAMCISLYHAMELLERHGLRVFVNNFD--ADEHGRDKFVLKDVALRELVEHVRQQ 384
Query: 84 LDINIMS-SEYA--------------WSHLKFIRLREILESHFRLHAEKGETTKVIIFAN 128
L N + S +A + H K+ + R++L HF HA+ ++ I+F
Sbjct: 385 LGSNPLDFSTHAMTNGQVAPLPATLDFGHPKYEQARQVLLQHFESHAD----SRAIVFCE 440
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQSSG------VTQQEQKEIMKKFRAGEFNTLIAT 182
YR V I +L P+V+ FVGQSSG +TQ+EQ +IM FR G N L+AT
Sbjct: 441 YRESVMLIQRLLLQHRPLVRPRCFVGQSSGGSGICALTQKEQLQIMSDFRQGITNVLVAT 500
Query: 183 SVGEEGLDIGEIDLVICFD-AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
S+GEEGLD+GE++L++CFD +P + VQR+GRTGR++ G V+L+T+GRE + +
Sbjct: 501 SIGEEGLDVGEVELIVCFDICSSNPTRFVQRIGRTGRQKRGDVVMLVTEGREQQLLKEML 560
Query: 242 QTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKEN 301
K++ + + + L ++ PR++P PR + + + PA+ + P
Sbjct: 561 ANKDQTNRKLLQSTLVKSALYQHAPRLVPPQYHPRCE------QRFMEPAQVKPQPPSPA 614
Query: 302 EKANKKSKKK 311
KA + K+
Sbjct: 615 NKARGRQPKQ 624
>gi|356523564|ref|XP_003530407.1| PREDICTED: ATP-dependent DNA helicase MPH1-like [Glycine max]
Length = 1262
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 136/229 (59%), Gaps = 13/229 (5%)
Query: 90 SSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKA 149
S + S K ++ ++L HF+ + ++VIIF+NYR V +I + L + +VKA
Sbjct: 423 SLSHGASSPKLSKMLDVLLEHFK--TNDPQNSRVIIFSNYRESVRDIMNALGDIGELVKA 480
Query: 150 SMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
+ F+GQSSG +Q+ Q+ ++KKFR+G +N ++ATS+GEEGLDI E+DLVI FDA
Sbjct: 481 TEFIGQSSGKAMKGQSQKVQQAVLKKFRSGAYNVIVATSIGEEGLDIMEVDLVISFDANI 540
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLT-QGREAHNFQTSMQTCKSYVEKIINNKSIYANLAK 263
SP++M+QR+GRTGRK +GR +++ +G E + K+ + K + N I +
Sbjct: 541 SPLRMIQRMGRTGRKHDGRSLLVFACEGTELKGYLQKQAKSKT-ISKHMRNGGINSFTFH 599
Query: 264 NGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKKL 312
PRMIP + P +KC+ + ++ + P K K++E SK KL
Sbjct: 600 PSPRMIPHVLKPEVKCVELSIEKFI----PRPKNVKDDELHISPSKDKL 644
>gi|62734194|gb|AAX96303.1| Similar to probable ATP-dependent RNA helicase - fission yeast
(Schizosaccharomyces pombe) [Oryza sativa Japonica
Group]
gi|77548994|gb|ABA91791.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
Length = 1488
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 171/301 (56%), Gaps = 26/301 (8%)
Query: 2 LAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKED 61
+ KDK+ +A P+I + I F L ++ L++YG+++ + + +E ++
Sbjct: 501 MLKDKF--DQAPPPNIPLADKKEIGISFQALTLLYGIMKMLLSYGIKAAHQS-IEAKYKE 557
Query: 62 GSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETT 121
GS +L ++N + + ++ L I+S K L E+L HFR + + +
Sbjct: 558 GSWKVLTRNNTFLEVKKTMENFLSQGILSP-------KVRTLVEVLLDHFR---KNPKDS 607
Query: 122 KVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSS------GVTQQEQKEIMKKFRAG 174
+VIIFA+YR V EI L+ ++ +V+ + F+GQSS G TQ+ Q+ I+ KFR+G
Sbjct: 608 RVIIFAHYRECVKEILCSLRNIDGELVRPAAFIGQSSTGDQLKGQTQKMQQAILHKFRSG 667
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREA 234
E+N L+ATS+GEEGLDI E+DLV+CFDA S ++M+QR+GRTGRK GR IL + +
Sbjct: 668 EYNILVATSIGEEGLDIMEVDLVVCFDANISALRMIQRMGRTGRKNEGRVDILFLEMKGY 727
Query: 235 HNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPS 294
+ Q + +T K K++ ++ + + PRM+P P +K + + ++ + +K S
Sbjct: 728 LSKQGNTKTMK----KLLRDRRRFE--YHDSPRMVPHVYNPEVKFVELSIEKYIPCSKKS 781
Query: 295 K 295
K
Sbjct: 782 K 782
>gi|389742160|gb|EIM83347.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 1322
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 134/219 (61%), Gaps = 24/219 (10%)
Query: 115 AEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIM 168
+G+ T+V++F +R V ++ + L P+++A+ F+GQ + G Q++Q +++
Sbjct: 402 GSEGDDTRVMVFVTFREAVEQLVEFLNEESPIIRATKFIGQGADKAGKKGFAQKDQLDVI 461
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
K+F+ GEFN L++TS+GEEGLDIGEID+++C+++QK+PI+M+QR+GRTGRKR+G +LL
Sbjct: 462 KRFKQGEFNVLVSTSIGEEGLDIGEIDMIVCYESQKTPIRMLQRVGRTGRKRDGYVHVLL 521
Query: 229 TQGREAHNFQTSMQTCKSYVEKIINNKSI--YANLAKNGPRMIPAHVTPRIKCLHIVVKD 286
+GRE N+ + ++ + + I+ + + YA++ R++P H+ P + + +
Sbjct: 522 AEGREELNWNKAQESYANVQKSIVRGEQLEFYADVE----RLLPDHIKPEPLEMEMDI-- 575
Query: 287 RVTPAKPSKKKPKENEKANKKSKKKLETDGNSEPAGKQN 325
+P + E+A +K + T+G K+N
Sbjct: 576 ----------EPYDREEATEKKGRSSSTNGQGSAKRKRN 604
>gi|440639733|gb|ELR09652.1| hypothetical protein GMDG_04143 [Geomyces destructans 20631-21]
Length = 988
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 182/329 (55%), Gaps = 25/329 (7%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEV---SK 59
A++ ++KS A N L M++ F V ++ ++ L +G+ F+ + + ++
Sbjct: 359 AQETWLKSPAG-KSANFGLKGMMRSLFTVLAGVSHGIKLLNFHGVGPFFQTMKDFRSEAE 417
Query: 60 EDGSCPILGKDNDLQNL-LQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKG 118
E G+ P K + + +++ +++ I ++ H K L + + +HF L A G
Sbjct: 418 ERGAKPGKYKKQIMDSPHFKKMMDLVNMWINKDDFV-GHPKLTYLCDTVLNHF-LDAGDG 475
Query: 119 --------ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQK 165
TT++I+F YR E+ VL PMV+AS+FVGQ S G+ Q Q
Sbjct: 476 RREDGAPPSTTRIIVFCEYRGSAEEVARVLNRHAPMVRASVFVGQAGTKHSDGMNQAMQI 535
Query: 166 EIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV 225
E ++KF+ G FN ++ATS+GEEGLDIG++DL++C+DA SPI+M+QR+GRTGRKR G V
Sbjct: 536 ETIRKFKEGIFNVIVATSIGEEGLDIGQVDLIVCYDASSSPIRMLQRMGRTGRKRAGNIV 595
Query: 226 ILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI--KCLHIV 283
+LL +G+E +F + ++ ++++I++ S + R++P + P + + + I
Sbjct: 596 LLLMRGKEEDSFIKAKDNYEA-MQRMISDGSRFNFRFDLSTRIVPRDIVPAVDKRDIEIP 654
Query: 284 VKDRVTPAKPSKKKPKENEKANKKSKKKL 312
V++ P+ P K + ++A K+ KK
Sbjct: 655 VENTQDPSLPEPK--RRAKRAPKRPPKKF 681
>gi|392571703|gb|EIW64875.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 1387
Score = 151 bits (381), Expect = 7e-34, Method: Composition-based stats.
Identities = 82/233 (35%), Positives = 138/233 (59%), Gaps = 18/233 (7%)
Query: 97 HLKFIRLREILESHF------RLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
H K LR +L HF A ++ ++F ++R V EI ++L P+++A
Sbjct: 566 HPKMDTLRTLLIDHFGKELPDPADASGVCKSRAMVFVSFRECVEEIVELLNKESPIIRAK 625
Query: 151 MFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
F+GQ + G Q+EQ E++++F+AG++N L++TS+GEEGLDIGE+D+++C+DAQK
Sbjct: 626 AFIGQGTDKQGKKGYAQKEQLEVIEQFKAGKYNLLVSTSIGEEGLDIGEVDVIVCYDAQK 685
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKII--NNKSIYANLA 262
+PI+M+QR+GRTGRK G ILL QGRE HN+Q + + I+ ++ +Y ++
Sbjct: 686 TPIRMLQRIGRTGRKAAGAVHILLAQGREEHNWQKAQSNYQDVQHFIVRASDLEVYGDV- 744
Query: 263 KNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKKLETD 315
R++P + P + + +++ V +PS+K N + K K+K + D
Sbjct: 745 ---DRLVPDDIDPEPVEMEMDIEEYVREERPSRKGSMMNGDSPKAKKRKRDAD 794
>gi|297846616|ref|XP_002891189.1| hypothetical protein ARALYDRAFT_473682 [Arabidopsis lyrata subsp.
lyrata]
gi|297337031|gb|EFH67448.1| hypothetical protein ARALYDRAFT_473682 [Arabidopsis lyrata subsp.
lyrata]
Length = 1321
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 138/229 (60%), Gaps = 18/229 (7%)
Query: 1 MLAKDKYVKSK-AQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSK 59
++A+DK+ ++ PH+N ++ F +L + L ++G+R Y L E K
Sbjct: 369 LMARDKFRQAPLPGLPHVNHG---DVESCFSALITLYHIRKLLSSHGIRPAYEMLEEKLK 425
Query: 60 EDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE 119
E ++ K+ D++ ++ +L S K ++ EIL HF++ +
Sbjct: 426 EGPFARLMSKNEDIRKTKLLMQQRLSHGAPSP-------KLSKMLEILVDHFKVKDPR-- 476
Query: 120 TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVT-----QQEQKEIMKKFRAG 174
T++VIIF+N+R V +I + L + +VKA+ F+GQSSG T Q+ Q+ +++KFRAG
Sbjct: 477 TSRVIIFSNFRGSVRDIMNALSNIGDVVKATEFIGQSSGKTLKGQSQKVQQAVLEKFRAG 536
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGR 223
FN ++ATS+GEEGLDI E+DLVICFDA SP++M+QR+GRTGRK NGR
Sbjct: 537 GFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRKNNGR 585
>gi|281202162|gb|EFA76367.1| hypothetical protein PPL_10132 [Polysphondylium pallidum PN500]
Length = 1441
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 141/242 (58%), Gaps = 18/242 (7%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEV-SKEDGSCPILGKDNDLQNLLQQLK-P 82
+ +F V L +A LV +G+ F + L ++ + + + P+ + +LQ ++
Sbjct: 532 VGYNFQVLSYLLNASTTLVKHGMSRFLDVLNQIKTPKKMTKPV-------KEVLQSMQWA 584
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKP 142
L ++ + + +H K +L E++ HF+ K +T+V+IF +++ V EI D L
Sbjct: 585 NLLTHVTAMDGKIAHNKMAKLGEVVIDHFK--NSKETSTRVMIFVDFKSAVKEIVDNLGK 642
Query: 143 LEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDL 196
L ++K F GQS G+ Q EQ I+ +FR+G +NTL+ T +GEEGLD GE+DL
Sbjct: 643 LSSLIKVMEFYGQSDSKGKAKGLKQSEQASILTRFRSGSYNTLVTTCIGEEGLDFGEVDL 702
Query: 197 VICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKS 256
++CFD +S ++ +QR+GRTGRKRNG+CVILL++G E + +S+ S + K N+ +
Sbjct: 703 IVCFDTPQSTVRNIQRMGRTGRKRNGKCVILLSEGTEESIYNSSVMKLDS-ILKYANSYT 761
Query: 257 IY 258
Y
Sbjct: 762 YY 763
>gi|443895514|dbj|GAC72860.1| DEAD-box like helicase [Pseudozyma antarctica T-34]
Length = 1464
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 126/218 (57%), Gaps = 42/218 (19%)
Query: 97 HLKFIRLREILESHF------RLHAEKGET--------------------------TKVI 124
H K ++L E+L HF R+H + T T+V+
Sbjct: 602 HPKMLKLVEVLGEHFKRCQEERMHNAEAYTESGHNVYGCTPKSSDLSQLNDLSQADTRVM 661
Query: 125 IFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNT 178
+F +YR EI L + KA+ FVGQS G++Q++Q+ ++ F+AG++N
Sbjct: 662 VFCSYRECCDEIVSFLN--DSGFKATEFVGQSKAKNGKKGMSQKDQERVINDFKAGKYNV 719
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
L+ATS+GEEGLDIG +DL C++A K I+M+QR+GRTGRKR G+ V+L+++GRE HN+Q
Sbjct: 720 LVATSIGEEGLDIGSVDLTACYEAVKDSIRMLQRIGRTGRKREGKIVVLVSEGREQHNWQ 779
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPR 276
S K+ V+K ++++ +Y L + RM+P H+ PR
Sbjct: 780 HSKDNYKA-VQKEVDSR-LYVELFDDVDRMVPDHIAPR 815
>gi|392576198|gb|EIW69329.1| hypothetical protein TREMEDRAFT_30400 [Tremella mesenterica DSM
1558]
Length = 1339
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 172/320 (53%), Gaps = 36/320 (11%)
Query: 35 LASALENLVTYGLRSFYNNLVEVSKED----------GSCPILGKDNDLQNLLQQLKPKL 84
+A A+ +L+ + L F+ LVE+S G L + + Q LL+ ++ +
Sbjct: 505 MARAMGHLLEFSLGMFHTVLVELSGGSNAEGKKVGTKGGAGALRNNIEFQRLLRDVE--I 562
Query: 85 DINIM-----SSEYAWSHLKFIRLREILESHFRLHAEKGET------TKVIIFANYRVVV 133
+IN + A H K + E+L HF AE + T+ ++F ++R V
Sbjct: 563 EINCIRIGKGGRTKADRHPKMAKTLELLLEHFTAAAEDAKNHGTANDTRAMVFCSFRECV 622
Query: 134 AEIFDVLKPLEPMVKASMFVGQSSG-------VTQQEQKEIMKKFRAGEFNTLIATSVGE 186
E+ D L ++KA+ FVGQS G Q+EQK + F+ G++N L++TS+GE
Sbjct: 623 LEVVDALNQHPELLKATKFVGQSQGKQDHDKGFNQKEQKRTIADFKEGKYNILVSTSIGE 682
Query: 187 EGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKS 246
EGLDIGE+D V+ +D K IK++QR+GRTGRKR+GR +L+++ RE N+ ++ QT +
Sbjct: 683 EGLDIGEVDFVVIYDMPKQSIKLLQRVGRTGRKRDGRVHVLMSENREDANWDSAQQTHRE 742
Query: 247 YVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANK 306
E+I++++++ L ++ ++P P+ + V D PA K+P + A+
Sbjct: 743 IQEEILHSRNL--ELFEDVESLLPRGKFPQCVEQEMPV-DPWDPADQKSKRPLPS--ASN 797
Query: 307 KSKKKLETDGNSEPAGKQNK 326
+ + LE DG +PA K+ +
Sbjct: 798 TTTRSLEDDGE-KPAKKKRR 816
>gi|255571736|ref|XP_002526811.1| protein with unknown function [Ricinus communis]
gi|223533815|gb|EEF35546.1| protein with unknown function [Ricinus communis]
Length = 1351
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 123/187 (65%), Gaps = 14/187 (7%)
Query: 42 LVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFI 101
L ++G+R Y L E K+ ++ K+ D++ K KL + S A S K
Sbjct: 395 LSSHGIRPAYEMLEEKLKQGSFARLMSKNEDIR------KVKLSMQQSLSHGAPSP-KLS 447
Query: 102 RLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG--- 158
++ EIL HF+ A+ + ++VIIF+N+R V +I D L +E +VKA+ F+GQSSG
Sbjct: 448 KMLEILTDHFK--AKDPQNSRVIIFSNFRGSVRDIMDALTNIENVVKATEFIGQSSGKAL 505
Query: 159 --VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
+Q+ Q+ +++KFRAG++N ++ATS+GEEGLDI E+DLVICFDA SP++M+QR+GRT
Sbjct: 506 KGQSQKVQQAVLEKFRAGKYNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRT 565
Query: 217 GRKRNGR 223
GRK +GR
Sbjct: 566 GRKHDGR 572
>gi|353238211|emb|CCA70164.1| related to probable RNA helicase MPH1 [Piriformospora indica DSM
11827]
Length = 1197
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 141/253 (55%), Gaps = 38/253 (15%)
Query: 96 SHLKFIRLREILESHFRLHAE--------KGE-----TTKVIIFANYRVVVAEIFDVLKP 142
+H K +LR + HF +AE GE +TK+I++ ++R V EI +L
Sbjct: 554 THPKMEKLRTLAIQHF-ANAEIVEEDKVLPGEQPAKSSTKMIVYCSFRECVDEITAMLNE 612
Query: 143 LEPMVKASMFVGQ------SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDL 196
+PM++A F+GQ + GV+Q+EQ ++K F AG++N +++TS+GEEGLDIGE++
Sbjct: 613 QQPMIRAHRFIGQGIDKRGAKGVSQKEQLAVIKDFSAGKYNVIVSTSIGEEGLDIGEVEC 672
Query: 197 VICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKS 256
++C+DAQK+ I+ +QR GRTGRK+ G +LLT+GR+ N+ T+ K + I+
Sbjct: 673 IVCYDAQKTAIRSLQRAGRTGRKKAGVVEVLLTKGRDDRNWATATAAYKEVQQSIVRGTD 732
Query: 257 IYANLAKNGPRMIPAHVTP-----RIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKK 311
+ L + PR++P +V P R++C+ V + +PK N K
Sbjct: 733 L--ELYGDVPRLLPDNVEPKCIEMRMECIPYV-----------RDEPKRRGSGNTSRKSS 779
Query: 312 LETDGNSEPAGKQ 324
+T+ +P ++
Sbjct: 780 SKTNATKQPGSRK 792
>gi|328774208|gb|EGF84245.1| hypothetical protein BATDEDRAFT_9192, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 581
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 158/283 (55%), Gaps = 30/283 (10%)
Query: 18 NRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNN----LVEVSKEDGSCPI--LGKDN 71
NR I D + ++ +AL+ L TYG+RSFY+ L E E S L +++
Sbjct: 295 NRAQISSIMNDSGICMAMCAALQQLQTYGIRSFYDTVSSFLAEAPSEKNSRSRSELVENS 354
Query: 72 DLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRL----HAEKGET------T 121
DL+ L+ + I S SH K RL ++ HF + ++G + +
Sbjct: 355 DLKALMIHVN-----EITKSPDFSSHPKLDRLVAVVLEHFSKELPDNGDEGSSDASLSKS 409
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG--------VTQQEQKEIMKKFRA 173
+V+IF+ YR V EI L P ++ F+GQSS TQ+EQ E++ KF++
Sbjct: 410 RVMIFSQYRDNVDEIVTKLNQHHPFLRVMSFIGQSSSKSGKKGKGFTQKEQLEVISKFQS 469
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
G +N L++TS+GEEGLDIG++DL++C+DAQ SP++M+QR+GRTGRKR GR V++L++G+E
Sbjct: 470 GNYNVLVSTSIGEEGLDIGDVDLIVCYDAQTSPVRMLQRMGRTGRKRQGRIVVILSKGKE 529
Query: 234 AHNFQTSMQTCKSYVEKIINNKSIYANL-AKNGPRMIPAHVTP 275
+ + KS I++ + + + N R+IP++ P
Sbjct: 530 EEIHRKAQAQYKSIQRAIMDGQGKRIQMYSGNLSRIIPSNARP 572
>gi|168001533|ref|XP_001753469.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695348|gb|EDQ81692.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 624
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 161/295 (54%), Gaps = 37/295 (12%)
Query: 3 AKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDG 62
A+DK+ ++ Q + + R ++ F + +L + L ++G+R +++ ++G
Sbjct: 313 ARDKFRQAPPQ--SLQQHQYREVESFFSMAITLYHIYKLLHSHGVRPALE-MLQTKMQEG 369
Query: 63 SCPILGKDNDLQ---NLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE 119
+ +L +++ LQ NL+Q+ S + K ++L I+ HFR H
Sbjct: 370 TLRLLARNSRLQEIKNLMQE----------SVGHGAPSPKLVKLEAIILQHFRDHDPL-- 417
Query: 120 TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----------------GVTQQ 162
TT+VIIF N+R V +I + L + +VKA F+GQSS G TQ+
Sbjct: 418 TTRVIIFTNFRESVKDILEALLKVGHIVKAMEFIGQSSVIGGLRMGHVYPGKASKGQTQK 477
Query: 163 EQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNG 222
Q+ +++KFR+G FNT++ATS+ EEGLDI E+DLVICFDA SP++M+QR+GRTGRKR+G
Sbjct: 478 MQQAVLQKFRSGGFNTIVATSIAEEGLDIMEVDLVICFDANISPLRMIQRMGRTGRKRDG 537
Query: 223 RCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
R IL+ + + + Y++K NK++ ++ G H +PR+
Sbjct: 538 RVDILINT--YSLVLASEGAEVQGYLKKQAKNKALGKHMQHGGVNSFSFHPSPRM 590
>gi|452825107|gb|EME32106.1| ATP-dependent RNA helicase-like protein [Galdieria sulphuraria]
Length = 1137
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 120/202 (59%), Gaps = 20/202 (9%)
Query: 96 SHLKFIRLREILESHFRLHA-------EKGETTKVIIFANYRVVVAEIFDVLKPLEPMVK 148
+H K ++ E+L+ HF + E +T+ I+FA YR V E+ +L EP++
Sbjct: 572 THPKALKCVEVLKHHFSETSTPCSGFVEGKSSTRAIVFAQYRESVVELRRILAQYEPLIH 631
Query: 149 ASMFVGQ-----------SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLV 197
A FVGQ +SG++Q+EQ E++++FR G FN L++TS+GEEGLDI ++DL+
Sbjct: 632 AMCFVGQAPSANSHKSQKTSGMSQKEQIEVLREFRKGTFNVLVSTSIGEEGLDIADVDLI 691
Query: 198 ICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSI 257
I +D SPI+M+QR+GRTGR R G+ V+LLT+G E M + + K + +K
Sbjct: 692 ISYDVISSPIRMLQRMGRTGRARAGQIVVLLTEGCEETRL-CEMNKRATSIAKSLRDKLN 750
Query: 258 YANLAKNGPRMIPAHVTPRIKC 279
+L +N PRMIP T I C
Sbjct: 751 CFSLYENSPRMIPTDGT-TIHC 771
>gi|145547248|ref|XP_001459306.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427130|emb|CAK91909.1| unnamed protein product [Paramecium tetraurelia]
Length = 712
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 154/265 (58%), Gaps = 31/265 (11%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K +L+EI ++HF +KVI+F N R + + + +E VKAS+FVGQ+
Sbjct: 331 HPKIYKLKEIFKNHF-----ANNQSKVIVFTNSRDNAQLLCNHINQVEN-VKASIFVGQA 384
Query: 157 S-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+ Q+EQ +++ KF+ E N L+AT + EEGLDIGE+DL+IC+D+ SPI+M+Q
Sbjct: 385 SSKNQAGMKQKEQLQVIDKFK-NELNVLVATCIAEEGLDIGEVDLIICYDSGFSPIRMIQ 443
Query: 212 RLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPA 271
R+GRTGRKR+GR ++LLT+G+EA +++ S+ ++++ K NL + PR++ +
Sbjct: 444 RMGRTGRKRDGRIIVLLTEGKEAADYEKSVNKYSKLIKEL---KDFNINLYSSNPRILQS 500
Query: 272 HVTPRIKCL-----HIVVKDRVTPAKPSKKKPKENEKANKKSKK---------KLETDGN 317
P+IK + I +K + P K K K+ ++++K + + K T
Sbjct: 501 Q--PQIKFIDGDIEQIDIKIKQDPIKTKNKDLKKQKRSHKNTDQQETKQIKIEKFFTKNL 558
Query: 318 SEPAGKQNKTNAKKTKKQPMMTQSN 342
+ + + + ++ QPM+ +SN
Sbjct: 559 KDISEETEEKQQTQSHYQPMLLESN 583
>gi|196007514|ref|XP_002113623.1| hypothetical protein TRIADDRAFT_26257 [Trichoplax adhaerens]
gi|190584027|gb|EDV24097.1| hypothetical protein TRIADDRAFT_26257 [Trichoplax adhaerens]
Length = 642
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 174/312 (55%), Gaps = 40/312 (12%)
Query: 2 LAKDKYVKSKAQFPHINRDLDRM---IQRDFHVTHSLASALENLVTYGLRSFY------- 51
L+K + +K++ QF I+ DF + SL A E L+ G++SFY
Sbjct: 268 LSKYQILKAREQFRKGTSGFSTQRGSIEGDFALAISLYHAYELLIQQGMKSFYQFAKGIV 327
Query: 52 NNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS----------EYAW-SHLKF 100
+N SK G+ L K+ ++ +L K + + S ++ SH K
Sbjct: 328 DNSKSTSKVRGN---LAKNRIFIEIMDELNFKFNRSYNSQLTPKSKTTNVQFLLNSHPKL 384
Query: 101 IRLREILESHFR----LHAEKGET---TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFV 153
+LR+I+ HF + G++ T+++IFA YR V EI D+LK P VK F
Sbjct: 385 SKLRDIVIGHFENFIVPDSNSGQSSLKTRIMIFAQYRDSVVEITDLLKHYSPTVKVMSFT 444
Query: 154 GQ-------SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
GQ S G++Q+EQ ++++ FR G +NTL++T VGEEGLDIG++DL+IC+D+ SP
Sbjct: 445 GQATSGGKSSRGLSQKEQLKVIQDFRRGGYNTLVSTCVGEEGLDIGDVDLIICYDSNTSP 504
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQGRE--AHNFQTSMQTCKSYVEKIINNKSIYANLAKN 264
I++VQR+GRTGRKR GR V+L+T+G+E A + Q+ + K + + I + L ++
Sbjct: 505 IRLVQRMGRTGRKRRGRVVLLVTEGKEEQASSLQSKTENKKKSIHRAIRDSVNSFQLYQH 564
Query: 265 GPRMIPAHVTPR 276
PRM+PAH+ P+
Sbjct: 565 NPRMVPAHLKPQ 576
>gi|325182937|emb|CCA17392.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
gi|325189887|emb|CCA24367.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 1653
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 149/280 (53%), Gaps = 41/280 (14%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKED-----GSCPILGKDNDLQNLLQ 78
+I+ DF + S A + L+ +G++ +EV ++D S L + N+ + L++
Sbjct: 428 IIEGDFGLLLSWVHARKLLMVHGIKP-CTGYIEVWRQDTKRISWSKRDLMESNEFKGLVE 486
Query: 79 QLKPKLDINIMSSEYAWS--HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEI 136
L+ M S+ S H K LR+ILE HF E + TK I+F +R V I
Sbjct: 487 YLES------MGSKEGLSQDHSKLDVLRKILEKHF---TESKKETKAIVFTQFRASVDII 537
Query: 137 FDVLKPLEPMVKASMFVGQSS---------------GVTQQEQKEIMKKFRAGEFNTLIA 181
D L E ++A F+GQSS G TQ+ Q+EI+ F+AG N L+A
Sbjct: 538 QDRLSKSES-IRAERFIGQSSVTSSCFNTKLVENQRGQTQKHQQEIITNFKAGTINVLVA 596
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
T + EEGLDIG++DL++ +D SP++++QR+GRTGRKR G VIL+T+G E Q S+
Sbjct: 597 TCIAEEGLDIGQVDLIVLYDTVTSPVRLIQRMGRTGRKRIGNVVILVTEGDEEKKLQRSL 656
Query: 242 QTC----KSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
K+ K + NK +A PRM+P VTP++
Sbjct: 657 SNARGITKALTTKALKNKLEFAKC----PRMLPESVTPQL 692
>gi|388851457|emb|CCF54859.1| related to MPH1-Member of the DEAH family of helicases [Ustilago
hordei]
Length = 1522
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 124/218 (56%), Gaps = 42/218 (19%)
Query: 97 HLKFIRLREILESHF-----------RLHAEKGET---------------------TKVI 124
H K I+LR +L HF +AE G T+V+
Sbjct: 627 HPKMIKLRNVLIEHFDSFKAEQLQNAEAYAESGHDVFGNTPKSGELANFTNSSQADTRVM 686
Query: 125 IFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG------VTQQEQKEIMKKFRAGEFNT 178
+F +YR V EI L + KA+ FVGQS G ++Q++Q+ ++ F+ G++N
Sbjct: 687 VFCSYRECVDEIVSYLN--DSGFKATEFVGQSKGKSGKKGMSQKDQERVIADFKVGKYNV 744
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
L+ATS+GEEGLDIG +DL C++A K I+M+QR+GRTGRKR G+ V+L+++GRE HN+Q
Sbjct: 745 LVATSIGEEGLDIGSVDLTACYEAVKDSIRMLQRIGRTGRKREGKIVVLMSEGREQHNWQ 804
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPR 276
S K+ V+K ++++ +Y L + RM+P + P+
Sbjct: 805 HSKDNYKA-VQKEVDSR-LYVELFDDVDRMVPEGILPQ 840
>gi|296081072|emb|CBI18266.3| unnamed protein product [Vitis vinifera]
Length = 1448
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 141/263 (53%), Gaps = 28/263 (10%)
Query: 99 KFIRLREILESHFR--------LH-AEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKA 149
K ++ +IL HFR +H A + ++VIIF+N+R V +I D L + VKA
Sbjct: 497 KLSKMLDILIDHFRDEPHNTGSVHKANNPQNSRVIIFSNFRGSVRDIMDALAKIGESVKA 556
Query: 150 SMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
+ F+GQSSG +Q+ Q+ +++KFRAG FN ++ATS+GEEGLDI E+DLVICFDA
Sbjct: 557 TQFIGQSSGKASKGQSQKVQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANI 616
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKN 264
SP++M+QR+GRTGRK +GR V +L K Y+ K N+K++ ++
Sbjct: 617 SPLRMIQRMGRTGRKHDGR-VDILLSFMLLLVLACEGSEMKGYMRKQANSKTVRKHMRNG 675
Query: 265 G---------PRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKKLETD 315
G PRMIP P ++ + + ++ V P +K K++ T+
Sbjct: 676 GMNSFNFHSSPRMIPHIFKPEVQFVELSIEQFV----PRGRKGKDDHPIQAPISTDKLTN 731
Query: 316 GNSEPAGKQNKTNAKKTKKQPMM 338
+E K T K T + ++
Sbjct: 732 VETEVLAKYFGTTGKITWRPSLI 754
>gi|343426790|emb|CBQ70318.1| related to MPH1-Member of the DEAH family of helicases [Sporisorium
reilianum SRZ2]
Length = 1493
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 125/218 (57%), Gaps = 42/218 (19%)
Query: 97 HLKFIRLREILESHF-----------RLHAEKGET---------------------TKVI 124
H K ++LR +L HF +AE G T+V+
Sbjct: 616 HPKMLKLRNVLIEHFDSVQAGQVHNAEAYAESGHDVFGNTPKSGELANFASSSQADTRVM 675
Query: 125 IFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKEIMKKFRAGEFNT 178
+F +YR EI L + KA+ FVGQS G++Q++Q+ ++ F+AG++N
Sbjct: 676 VFCSYRECCDEIVSYLN--DSGFKATEFVGQSKSKSGKKGMSQKDQERVINDFKAGKYNV 733
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
L+ATS+GEEGLDIG +DL +C++A K I+M+QR+GRTGRKR G+ +L+++GRE HN+Q
Sbjct: 734 LVATSIGEEGLDIGSVDLTVCYEAVKDSIRMLQRIGRTGRKREGKIAVLVSEGREQHNWQ 793
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPR 276
S K+ V+K ++++ ++ L + RM+P H+ P+
Sbjct: 794 HSKDNYKA-VQKELDSR-MHVELFDDVDRMVPDHILPQ 829
>gi|218185362|gb|EEC67789.1| hypothetical protein OsI_35346 [Oryza sativa Indica Group]
Length = 648
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 140/237 (59%), Gaps = 20/237 (8%)
Query: 2 LAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKED 61
+ KDK+ +A P+I + I F L ++ L++YG+++ + + +E ++
Sbjct: 423 MLKDKF--DQAPPPNIPLADKKEIGISFQALTLLYGIMKMLLSYGIKAAHQS-IEAKYKE 479
Query: 62 GSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETT 121
GS +L ++N + + ++ L I+S K L E+L HFR + + +
Sbjct: 480 GSWKVLTRNNTFLEVKKTMENFLSQGILSP-------KVRTLVEVLLDHFR---KNPKDS 529
Query: 122 KVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSS------GVTQQEQKEIMKKFRAG 174
+VIIFA+YR V EI L+ ++ +V+ + F+GQSS G TQ+ Q+ I+ KFR+G
Sbjct: 530 RVIIFAHYRECVKEILCSLRNIDGELVRPAAFIGQSSTGDQLKGQTQKMQQAILHKFRSG 589
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
E+N L+ATS+GEEGLDI E+DLV+CFDA S ++M+QR+GRTGRK GR IL G
Sbjct: 590 EYNILVATSIGEEGLDIMEVDLVVCFDANISALRMIQRMGRTGRKNEGRVDILFLVG 646
>gi|222615621|gb|EEE51753.1| hypothetical protein OsJ_33185 [Oryza sativa Japonica Group]
Length = 726
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 140/237 (59%), Gaps = 20/237 (8%)
Query: 2 LAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKED 61
+ KDK+ +A P+I + I F L ++ L++YG+++ + + +E ++
Sbjct: 501 MLKDKF--DQAPPPNIPLADKKEIGISFQALTLLYGIMKMLLSYGIKAAHQS-IEAKYKE 557
Query: 62 GSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETT 121
GS +L ++N + + ++ L I+S K L E+L HFR + + +
Sbjct: 558 GSWKVLTRNNTFLEVKKTMENFLSQGILSP-------KVRTLVEVLLDHFR---KNPKDS 607
Query: 122 KVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSS------GVTQQEQKEIMKKFRAG 174
+VIIFA+YR V EI L+ ++ +V+ + F+GQSS G TQ+ Q+ I+ KFR+G
Sbjct: 608 RVIIFAHYRECVKEILCSLRNIDGELVRPAAFIGQSSTGDQLKGQTQKMQQAILHKFRSG 667
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
E+N L+ATS+GEEGLDI E+DLV+CFDA S ++M+QR+GRTGRK GR IL G
Sbjct: 668 EYNILVATSIGEEGLDIMEVDLVVCFDANISALRMIQRMGRTGRKNEGRVDILFLVG 724
>gi|71004784|ref|XP_757058.1| hypothetical protein UM00911.1 [Ustilago maydis 521]
gi|46096862|gb|EAK82095.1| hypothetical protein UM00911.1 [Ustilago maydis 521]
Length = 1490
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 125/205 (60%), Gaps = 11/205 (5%)
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS------GVTQQEQKE 166
L + T+ ++F +YR EI L E KA+ FVGQS G++Q++Q+
Sbjct: 668 LESSSQADTRAMVFCSYRECCDEIVGFLN--ESGFKATEFVGQSKSRSGKKGMSQKDQER 725
Query: 167 IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVI 226
++ F+ G +N L+ATS+GEEGLDIG +DL +C++A K I+M+QR+GRTGRKR G+ +
Sbjct: 726 VIADFKKGIYNVLVATSIGEEGLDIGSVDLTVCYEAVKDSIRMLQRIGRTGRKREGKIAV 785
Query: 227 LLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKD 286
L+++GRE HN+Q S K+ V+K ++++ ++ L + RM+P H++PR L V +
Sbjct: 786 LVSEGREQHNWQHSKNNYKA-VQKEVDSR-MHVELFDDVDRMVPDHISPR-PVLKEVEQP 842
Query: 287 RVTPAKPSKKKPKENEKANKKSKKK 311
P+ S K + +A K +K K
Sbjct: 843 EFEPSMISNDKAIKAPRATKVAKPK 867
>gi|149051314|gb|EDM03487.1| rCG61774 [Rattus norvegicus]
Length = 647
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 171/314 (54%), Gaps = 37/314 (11%)
Query: 1 MLAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKE 60
+LA+D++ K+ + P+I +I+ + + SL E L G+RS Y L +
Sbjct: 211 ILARDQFRKNPS--PNIVGVQQGIIEGELAICISLYHGYELLQQLGMRSLYFFLSGIM-- 266
Query: 61 DGSCPI------LGKDNDLQNLLQQLKPKL----DINIMSS-----------EYAWSHLK 99
DG+ + L ++ D L L+ D S ++ +SH K
Sbjct: 267 DGTKGMTRVKTELSRNEDFTKLYSHLQSVFAHVRDAAAASEASAFQKGNKEKKFVYSHPK 326
Query: 100 FIRLREILESHFRLHAEKGET------TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFV 153
+L E++ HF+ K T ++V+IF+++R V EI ++L +P V+ FV
Sbjct: 327 LKKLEEVILEHFKSWNAKNTTEKKCQESRVMIFSSFRDSVEEIAEMLSQHQPGVRVMTFV 386
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +SG TQ+EQ ++++FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI+
Sbjct: 387 GHASGKNTKGYTQKEQLRVVRQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIR 446
Query: 209 MVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRM 268
++QR+GRTGR+R GR V++L +GRE + S K+ + I N+ + L + PRM
Sbjct: 447 LIQRMGRTGRRRQGRIVVILAEGREERTYNQSQSNKKNIYKAISGNRQV-LRLYQGSPRM 505
Query: 269 IPAHVTPRIKCLHI 282
+P + P + + I
Sbjct: 506 VPDKINPELHKMFI 519
>gi|164656084|ref|XP_001729170.1| hypothetical protein MGL_3637 [Malassezia globosa CBS 7966]
gi|159103060|gb|EDP41956.1| hypothetical protein MGL_3637 [Malassezia globosa CBS 7966]
Length = 869
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 140/233 (60%), Gaps = 22/233 (9%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K RL EIL+SHF E T++ I+F +R VV EI ++L ++ ++A+ F+GQ+
Sbjct: 573 HPKMKRLAEILQSHFA--REFTHTSRAIVFCTFREVVHEIVELLNQID--LRATPFIGQA 628
Query: 157 S------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
S G++Q++Q+++++ F+ G L+ATS+GEEGLDIGE+DL++C+DA + ++ +
Sbjct: 629 SDSKGHRGLSQKQQEQVVRAFKDGHVQILVATSIGEEGLDIGEVDLIVCYDAVRDSVRGL 688
Query: 211 QRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYAN---LAKNGPR 267
QR+GRTGR R+GR V++ T RE N+ Q+ SY K I N +AN L + PR
Sbjct: 689 QRIGRTGRMRDGRVVVMTTAEREESNWN---QSKASY--KNIQNLVRHANTIELYTDVPR 743
Query: 268 MIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKKLETDGNSEP 320
++P+ + P ++ + P +P + + ++ +K+S+ + G P
Sbjct: 744 LVPSSLQPEP----VMCEVEQPPQEPEQLRLSHPKRDSKQSRLPRKPRGQPVP 792
>gi|357152779|ref|XP_003576233.1| PREDICTED: uncharacterized protein LOC100835661 [Brachypodium
distachyon]
Length = 1395
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 165/299 (55%), Gaps = 26/299 (8%)
Query: 2 LAKDKYVKSKAQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKED 61
+ K+K+ ++A P++ + + I+R F SL + L+++G++ + + +E + +
Sbjct: 418 ILKEKF--NQAPLPNLPLEKKKEIRRSFAAVVSLCRISKLLLSHGIKPAHQS-IEATWSE 474
Query: 62 GSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETT 121
G+ + ++ + + + + S K +L E+L HF H + + +
Sbjct: 475 GAWNLFSRNEVFIKAKEMMGSIVGKGVPSP-------KVHKLVEVLLDHF--HKKNPKDS 525
Query: 122 KVIIFANYRVVVAEIFDVLKPL-EPMVKASMFVGQSS------GVTQQEQKEIMKKFRAG 174
+VIIF++YR V EI L + + + F+GQ+S G TQ+ Q+ I++KFR+G
Sbjct: 526 RVIIFSHYRESVKEILGALSDSGTGIFRPAQFIGQTSTGDRLKGQTQKMQQAILQKFRSG 585
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREA 234
E+N L+ATS+GEEGLDI E+DLVICFDA SP++M+QR+GRTGRK GR IL Q +
Sbjct: 586 EYNILVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRKHEGRVDILSWQELQG 645
Query: 235 HNF-QTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAK 292
+ Q S +T K+ + K +K Y PRM+P P +K + + ++ V +K
Sbjct: 646 YTRKQGSTRTMKNLLRK--RDKFDY----HASPRMVPHVYKPEVKYVKLSIEKYVPHSK 698
>gi|66820945|ref|XP_644014.1| hypothetical protein DDB_G0274841 [Dictyostelium discoideum AX4]
gi|60472360|gb|EAL70313.1| hypothetical protein DDB_G0274841 [Dictyostelium discoideum AX4]
Length = 1789
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 126/222 (56%), Gaps = 28/222 (12%)
Query: 42 LVTYGLRSFYNNLVEVSKEDGSCPIL---GKDNDLQNLLQQLKPKLDINIMSSEYAWSHL 98
L +GL SFY+ + + ED S + K+ + + + ++K +D ++ H
Sbjct: 759 LKVHGLESFYDKISNL--EDASSKTIKAFSKNENWKQFIIKIKKSIDNGLV-------HD 809
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPL--------EPMVKAS 150
K I+L ++L HF+ + ++KV+IF +R V EI D + + ++K
Sbjct: 810 KLIKLNDVLIEHFQ--SNNPRSSKVMIFVQFRRSVQEIIDFISNNNNGGGGGGKSLIKVM 867
Query: 151 MFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
F GQS+ G+ ++EQ+ I+ F G+ N L++T +GEEGLDIGE+DLV+C+D Q+
Sbjct: 868 PFYGQSATDKGVKGIHKKEQQAILNSFVNGDINVLVSTCIGEEGLDIGEVDLVVCYDVQQ 927
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKS 246
S +K QR GRTGRKR+GRC+ L+TQG E + ++ S S
Sbjct: 928 SSLKNTQRTGRTGRKRDGRCIFLITQGYEEYIYEKSQSNLDS 969
>gi|219123462|ref|XP_002182043.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406644|gb|EEC46583.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1565
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 101/170 (59%), Gaps = 11/170 (6%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
K +LREIL HF +++ I+F+ +R V+EI D+L P+++ FVGQ G
Sbjct: 621 KLTQLREILVEHFERARACSTSSRAIVFSQFRDSVSEIVDILSASRPLIRPRHFVGQGKG 680
Query: 159 -----------VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
+ Q EQ++ +++FR FN L+ T +GEEGLDIGE+DL++ FD +SPI
Sbjct: 681 TKGEGGIQLKGMRQVEQQQAIREFREDTFNVLVCTCIGEEGLDIGEVDLIVNFDTLRSPI 740
Query: 208 KMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSI 257
+M+QR GRTGRKR+GR V L+ +G E S Q+ ++ + N KS
Sbjct: 741 RMIQRTGRTGRKRDGRVVCLVAEGPEERTLLASRQSERNLAHALKNPKSF 790
>gi|307111602|gb|EFN59836.1| hypothetical protein CHLNCDRAFT_133597 [Chlorella variabilis]
Length = 1000
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 98/162 (60%), Gaps = 24/162 (14%)
Query: 96 SHLKFIRLREILESHFRLHA-EKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
S K I+L +IL HF E+G + +VI+F N+R VAEI L+ EP++ A F+G
Sbjct: 804 SSPKLIKLVQILRQHFSAQGGEEGASGRVIVFTNFRDGVAEIRAALQAHEPLITARSFIG 863
Query: 155 QS------------SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGE--------- 193
QS G+TQ+EQKE++K FR+G FN L+AT +GEEGLDI +
Sbjct: 864 QSNSGKSRGGKASGGGMTQKEQKEVLKGFRSGAFNCLVATCIGEEGLDIPQASCHKDACL 923
Query: 194 --IDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
+DL++C+DA SP + QR+GRTGR + GR V +L GRE
Sbjct: 924 AGVDLIVCYDATSSPTRSTQRMGRTGRHKEGRVVYILAAGRE 965
>gi|393247997|gb|EJD55504.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1053
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 156/291 (53%), Gaps = 52/291 (17%)
Query: 97 HLKFIRLREILESHFRLHAEKGE-----TTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
H K +LR +L +F + A +G+ +K I+F ++R V EI + LK P++ A+
Sbjct: 354 HPKLEKLRALLIDYF-VQAMEGDDPERKNSKAIVFVSFRACVEEIVEYLKADAPLINAAK 412
Query: 152 FVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKS 205
F+GQ G+ Q EQ E++++FR GEFN LI+TS+GEEGLDIGE+DL++C++ S
Sbjct: 413 FIGQGEDKKGGKGMAQSEQLELIERFRGGEFNVLISTSIGEEGLDIGEVDLIVCYETPSS 472
Query: 206 PIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNG 265
PI+ +QR GRTGRKR+G+ ++L+T+ RE N++ + + Y + + + L +
Sbjct: 473 PIRGLQRAGRTGRKRDGQFILLMTENREEQNWKKAQE---KYEQVQYSIRMAKYELFSDV 529
Query: 266 PRMIPAHVTPR-----IKCLHIVVKDRVT----------------PAKPSKKKPKENEKA 304
PR++P +TP ++C V + + P+ ++KK + ++ A
Sbjct: 530 PRLLPDDITPTCVERAVECEPYVREVKKKRKSKAAADEGEEGGDPPSTQTQKKKRNSDPA 589
Query: 305 N----------------KKSKKKLETDGNSEPAGKQNKTNAKKTKKQPMMT 339
+K +KK + DG+ + + K +KK+K ++T
Sbjct: 590 RNIPEGAATGFVTASSLRKKRKKGDEDGDDDADERPRKRASKKSKANEVLT 640
>gi|388581794|gb|EIM22101.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 1433
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 115/196 (58%), Gaps = 7/196 (3%)
Query: 96 SHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ 155
SH K +++ +L HF + T+ I+F + R V E+ D + P+++AS FVGQ
Sbjct: 531 SHPKMDKVQSLLLDHFTNFSNGNTETRAIVFISLRDTVEEVVDQINTNSPILRASAFVGQ 590
Query: 156 SS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
SS G+ Q++Q+++M ++AG FN L++TS+GEEGLDIG+IDL I +D KS I M+
Sbjct: 591 SSAKGKKGLNQKQQQKVMNDYKAGTFNVLVSTSIGEEGLDIGDIDLTITYDPGKSSISML 650
Query: 211 QRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIP 270
Q++GRTGRKR G L+ G E N++ + + I++ + L + R++P
Sbjct: 651 QKIGRTGRKRQGHVHTLMAAGIEEKNWEDAQIRHQDVQAYIVSGDQVA--LYDDVKRLVP 708
Query: 271 AHVTPRIKCLHIVVKD 286
V P + H+ V++
Sbjct: 709 EDVEPECEKRHVQVEE 724
>gi|321265233|ref|XP_003197333.1| member of the DEAH family of helicases; Mph1p [Cryptococcus gattii
WM276]
gi|317463812|gb|ADV25546.1| Member of the DEAH family of helicases, putative; Mph1p
[Cryptococcus gattii WM276]
Length = 1517
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 159/291 (54%), Gaps = 28/291 (9%)
Query: 31 VTHSLASALENLVTYGLRSFYNNLVE-VSKEDGSCPILGKDNDLQNLLQQLKPKLDINIM 89
V +A A+ +L+ + L F+++L E VS S G N + N + + + D++
Sbjct: 550 VLDKMARAMSHLLEFSLGMFHSSLDEMVSTSGKSKAGAGGANSIANNFEFQRLQRDVSQE 609
Query: 90 SSEY---------AWSHLKFIRLREILESHFRLHAEKGET------TKVIIFANYRVVVA 134
S A H K + E++ ++F E+ T T+ ++F + R V
Sbjct: 610 LSSIKIGRNGKTGADRHPKMQKALELMLAYFSQAEEEENTLGQKNNTRAMVFCSLRPCVM 669
Query: 135 EIFDVLKPLEPMVKASMFVGQSSG-------VTQQEQKEIMKKFRAGEFNTLIATSVGEE 187
E+ D+ +++A+ FVGQS+G Q+EQK+ + +F+AG FN L++TS+GEE
Sbjct: 670 ELVDMFNEHANLLRATKFVGQSNGKDERDKGFNQKEQKKTISEFKAGTFNILVSTSIGEE 729
Query: 188 GLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY 247
GLDIGE+D V+ +D + IK++QR+GRTGRKR+G +L+++ RE N+ T+ QT +
Sbjct: 730 GLDIGEVDFVVLYDMPRQSIKLLQRIGRTGRKRDGIVHVLMSENREDMNWDTAQQTHRDI 789
Query: 248 VEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVK-DRVTPAKPSKKK 297
E+I++++++ L ++ +IP P +CL V+ D P P KK
Sbjct: 790 QEEILHSRNL--ELFEDVEPLIPDRKMP--ECLEQVMPVDPWNPDDPQYKK 836
>gi|449442122|ref|XP_004138831.1| PREDICTED: uncharacterized protein LOC101221910 [Cucumis sativus]
Length = 1384
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 134/249 (53%), Gaps = 57/249 (22%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
K ++ E+L +HF+ + + ++VIIF+N+R V +I L +E +V+A+ F+GQSSG
Sbjct: 475 KLSKMMEVLTNHFK--TKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSG 532
Query: 159 -----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
+Q+ Q+ +++KFRAG FN ++AT +GEEGLDI E+DLVICFDA SPI+M+QR+
Sbjct: 533 KSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRM 592
Query: 214 GRTGRKRNGR-------CVILLTQGREAHN------------FQTSMQ----------TC 244
GRTGRK +GR I +T+ R + FQ+ + TC
Sbjct: 593 GRTGRKHDGRGHFNIEDGAIRVTKFRASSGWIARCVAQNTSEFQSFVHVYSEVEMPRCTC 652
Query: 245 ------------KSYVEKIINNKSIYANLAKNG---------PRMIPAHVTPRIKCLHIV 283
K Y++K +KSI ++ G RMIP + P ++ + +
Sbjct: 653 LLLVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLS 712
Query: 284 VKDRVTPAK 292
+K V P K
Sbjct: 713 IKQFVRPGK 721
>gi|210075569|ref|XP_502067.2| YALI0C20933p [Yarrowia lipolytica]
gi|199425312|emb|CAG82387.2| YALI0C20933p [Yarrowia lipolytica CLIB122]
Length = 923
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 133/256 (51%), Gaps = 22/256 (8%)
Query: 31 VTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKD----NDLQNLLQQLKPKLDI 86
V S+A A + L G+ FY+ L E+ + K D+ ++L K
Sbjct: 412 VVASIAHATQLLQHQGITQFYDTLKRRHDEEMARKQPTKSYEQVGDIGSILDATK----- 466
Query: 87 NIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM 146
IM E +H K L L F E T IIFA +R V I + L P
Sbjct: 467 TIMKKEGYLAHPKLNYLGSELNEFFSKAPEGANTGTCIIFARFRSTVNVIMEYLTKF-PQ 525
Query: 147 VKASMFVGQSS--------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVI 198
VK F+GQ+ G+TQ++Q+E++ KFR G +NTL+ATS+ EEGLDIG++DL+I
Sbjct: 526 VKPHEFIGQAPSREEGGGRGMTQKKQQEVISKFRKGVYNTLVATSIAEEGLDIGQVDLII 585
Query: 199 CFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIY 258
C+D+ SPI +QR+GRTGR R+GR V+L+T +N ++ + SY+++++ S
Sbjct: 586 CYDSNASPITSLQRMGRTGRSRDGRVVLLMTDKEMENNIKS--RDNYSYIQRLMEKGSRV 643
Query: 259 ANLAKNGPRMIPAHVT 274
N R+IP T
Sbjct: 644 KLYPPN--RVIPGAAT 657
>gi|58261824|ref|XP_568322.1| hypothetical protein CNM01670 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134118443|ref|XP_772108.1| hypothetical protein CNBM1540 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254715|gb|EAL17461.1| hypothetical protein CNBM1540 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230495|gb|AAW46805.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1528
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 178/333 (53%), Gaps = 38/333 (11%)
Query: 31 VTHSLASALENLVTYGLRSFYNNLVE-VSKEDGSCPILGKDNDLQNLLQQLKPKLDINIM 89
V +A A+ +L+ + L F+++L E VS S G N + N + + + D++
Sbjct: 560 VLDKMARAMSHLLEFSLGMFHSSLDEMVSAGGKSKAGAGGANSIANNFEFQRLQRDVSQE 619
Query: 90 SSEY---------AWSHLKFIRLREILESHFRLHAEKGET------TKVIIFANYRVVVA 134
S A H K + E++ +HF E+ T T+ ++F + R V
Sbjct: 620 LSSIKIGRNGKTGADRHPKMQKALELMLAHFSQAEEEENTLGQKNNTRAMVFCSLRPCVM 679
Query: 135 EIFDVLKPLEPMVKASMFVGQSSG-------VTQQEQKEIMKKFRAGEFNTLIATSVGEE 187
E+ D+ +++A+ FVGQS+G Q+EQK+ + +F+AG FN L++TS+GEE
Sbjct: 680 ELVDMFNEHPNLLRATKFVGQSNGKDERDKGFNQKEQKKTINEFKAGTFNILVSTSIGEE 739
Query: 188 GLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY 247
GLDIGE+D V+ +D + IK++QR+GRTGRKR+G +L+++ RE N+ T+ QT +
Sbjct: 740 GLDIGEVDFVVLYDMPRQSIKLLQRIGRTGRKRDGIVHVLMSENREDMNWDTAQQTHRDI 799
Query: 248 VEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKK 307
E+I++++++ L ++ +IP P +CL V+ V P P + K+ +K
Sbjct: 800 QEEILHSRNL--ELFEDVEPLIPDRKMP--ECLEQVMP--VDPWNPDDPQYKKMMDEGEK 853
Query: 308 SKKKLETDGNSEPAGKQNKTNAKKTKKQPMMTQ 340
++++ + ++ A + KK+PM+ +
Sbjct: 854 ELRRMQ---------RAHQPPASRKKKKPMVNE 877
>gi|118380585|ref|XP_001023456.1| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila]
gi|89305223|gb|EAS03211.1| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila SB210]
Length = 1858
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 130/242 (53%), Gaps = 33/242 (13%)
Query: 91 SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEI------FDVLKPL- 143
SE SH K +L E+L ++F +K IIF R +E+ DV+ P
Sbjct: 487 SEDLESHPKSEKLVELLTNYFLEEESIVNRSKTIIFTQSRNSASELKKLLNNIDVVNPAG 546
Query: 144 EPMVKASMFVGQSS----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVIC 199
+ ++++ +F+GQ++ G+ Q+ Q E +K F+ +NTLIAT +GEEGLDIGE+DL++C
Sbjct: 547 DKLIRSEIFIGQANLDGQGMNQKAQIETIKLFKQNVYNTLIATCIGEEGLDIGEVDLIVC 606
Query: 200 FDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNK---- 255
+D+ SPI+M+QR+GRTGRKR G+ +LL +GRE N+ S + K + + NN
Sbjct: 607 YDSGFSPIRMIQRMGRTGRKRAGKVYVLLMEGREYANYNQSQKKHKELMMLLKNNSCSQS 666
Query: 256 -SIYANLAKNG----------------PRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+ + + G PRMIP V P + + D TPA S+ +
Sbjct: 667 VTDFQQKGRTGRQPKATKRTFEFYGFNPRMIPQDVNPICRIIKGQNND-FTPAISSQSES 725
Query: 299 KE 300
++
Sbjct: 726 EQ 727
>gi|290985850|ref|XP_002675638.1| predicted protein [Naegleria gruberi]
gi|284089235|gb|EFC42894.1| predicted protein [Naegleria gruberi]
Length = 920
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 125/207 (60%), Gaps = 18/207 (8%)
Query: 88 IMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMV 147
I+S Y H K ++ +++ HF+ + + TKV++FA +R V I ++L E ++
Sbjct: 481 IISQGYV--HPKLKKMEQVILEHFQ---KASQETKVVVFALFRKTVDIIVEILSKHE-IL 534
Query: 148 KASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDA 202
K S F+GQ G Q++QK I+ FR G FN L++T +GEEGLDIGEIDL++ +D+
Sbjct: 535 KVSPFIGQGKGRAQKGFNQKKQKSIIHDFRDGIFNVLVSTPIGEEGLDIGEIDLIVLYDS 594
Query: 203 QKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSI-YANL 261
SP +++QR+GRTGRKR G V LL++GRE H ++ S++ K ++ + K I Y N
Sbjct: 595 ASSPTRLIQRVGRTGRKRKGNIVALLSEGRERHAYEESIKQKKVLIDAL---KEIPYHND 651
Query: 262 AK---NGPRMIPAHVTPRIKCLHIVVK 285
K RM+P + P++ I+V+
Sbjct: 652 VKFFEKNMRMVPNQIIPQVVREKIIVQ 678
>gi|145348608|ref|XP_001418738.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578968|gb|ABO97031.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 551
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 141/276 (51%), Gaps = 36/276 (13%)
Query: 25 IQRDFHVTH-SLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPK 83
I R+ H T L+ A E L+ YG +S Y+ ++ D S ++ + + + L L
Sbjct: 287 IYRNQHQTAMELSKAYELLLKYGAKSAYD-YIDKRGRDKSNTLVHRSDPVSVELVDL--- 342
Query: 84 LDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPL 143
I MSS A K RL IL+ HFR + T+VIIF +YR V +I L+ +
Sbjct: 343 --IRSMSSNGAHHSPKLDRLTSILKQHFR---DATADTRVIIFTSYRESVKDIVQALREV 397
Query: 144 EP------MVKASMFVGQ------------------SSGVTQQEQKEIMKKFRAGEFNTL 179
+K + FVGQ + G TQ+EQK+ + FRAG NTL
Sbjct: 398 PAGEDTACKIKVAEFVGQGDTGATGKKRAPGATSRGTKGQTQKEQKQTLDDFRAGTLNTL 457
Query: 180 IATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
+ATS+GEEGLDI +DL+ FD + I+ +QR+GRTGR R+G+ VIL T+G+E F T
Sbjct: 458 VATSIGEEGLDIPSVDLIFFFDVVDT-IRAIQRMGRTGRARDGKVVILATEGKEYAKF-T 515
Query: 240 SMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTP 275
S Q + + + L K PR++P VTP
Sbjct: 516 SEQKKYETLMTCLRMPETHFRLDKKCPRIVPDGVTP 551
>gi|340503267|gb|EGR29872.1| hypothetical protein IMG5_146930 [Ichthyophthirius multifiliis]
Length = 622
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 117/200 (58%), Gaps = 16/200 (8%)
Query: 96 SHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ 155
SH K +L +IL F+ +K I+F R ++ +L +++ +F+GQ
Sbjct: 395 SHPKSQQLIQILVDQFQNEKNVQNFSKSIVFTQNRNSAFQLKKLLNQSSVYIRSEVFIGQ 454
Query: 156 SS----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
++ G+ Q+ Q +++KKF+ E+NTLIAT +GEEGLDIGE+D+++C+D+ SPI+M+Q
Sbjct: 455 ANLDGQGMNQKAQIQVIKKFKNNEYNTLIATCIGEEGLDIGEVDVIVCYDSGFSPIRMIQ 514
Query: 212 RLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNG------ 265
R+GRTGRKR G+ ILL +G+E ++ S + K+ + K++ SI N K
Sbjct: 515 RMGRTGRKREGKVYILLMEGKEYLSYIQSQKRHKALI-KLLKINSIEGNFQKGSNKEKFQ 573
Query: 266 -----PRMIPAHVTPRIKCL 280
PRMIP V P K +
Sbjct: 574 FYGFNPRMIPVDVNPLCKII 593
>gi|308806203|ref|XP_003080413.1| DEAD-box like helicase (ISS) [Ostreococcus tauri]
gi|116058873|emb|CAL54580.1| DEAD-box like helicase (ISS) [Ostreococcus tauri]
Length = 1307
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 145/291 (49%), Gaps = 53/291 (18%)
Query: 89 MSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM-- 146
MS A K RL IL+ HF+ E T+VIIF +YR V +I L+ +
Sbjct: 521 MSCNGAHHSPKLDRLTSILKHHFK---ESTADTRVIIFTSYRTSVKDIVRALRDVPAGAD 577
Query: 147 ----VKASMFVGQ---------------------SSGVTQQEQKEIMKKFRAGEFNTLIA 181
+K + FVGQ + G TQ+EQK+ + FRAG NTL+A
Sbjct: 578 TACKIKVAEFVGQGDTAAGKKRGGVGGAGGDDRGTKGQTQKEQKQTLVDFRAGTLNTLVA 637
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
TS+GEEGLDI +DL++ FD I+ +QR+GRTGR R+G+ VIL T+G+E + +
Sbjct: 638 TSIGEEGLDIPSVDLIVFFDVVDI-IRAIQRMGRTGRARDGKVVILATEGKEFSKYTSEQ 696
Query: 242 QTCKS--YVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPK 299
+ ++ Y ++ N + L KN PR+IP VTP + + I P++K+ K
Sbjct: 697 KKYETLMYCLRVPGN---HFQLDKNCPRIIPEGVTPVCQLMMI-------DPSPAEKRTK 746
Query: 300 ENEKANKKSKKKLETDGNSEPAGKQNKTN-AKKTKKQPMMTQSNDIRTCFE 349
K ++K+KK P G + N AKK K P+ S I +E
Sbjct: 747 SKIKRDEKTKK---------PRGIKAILNAAKKLKDAPLDPASRAILYAYE 788
>gi|448082908|ref|XP_004195254.1| Piso0_005803 [Millerozyma farinosa CBS 7064]
gi|359376676|emb|CCE87258.1| Piso0_005803 [Millerozyma farinosa CBS 7064]
Length = 953
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 174/380 (45%), Gaps = 78/380 (20%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEVSKE-----------DGSCPILGKDNDLQNLL 77
+ + + AL L YG+RSFYN E KE + + + + LL
Sbjct: 360 LQILNVVGQALRRLNIYGIRSFYNYFSEKHKEFTTKFNNKKSTNQTAAKFYYHDSINQLL 419
Query: 78 QQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIF 137
+ + +++S E H K L ++E +KVIIF +R +I
Sbjct: 420 MECE-----DVLSQENFIGHPK---LEIVIEQIKEFFDNNTTDSKVIIFTEFRESALDIV 471
Query: 138 DVLKPLEPMVKASMFVGQSS---------------------------------------- 157
++L+ +K +F+GQ+
Sbjct: 472 NLLENSGDNIKPHIFIGQAKEREKFDEEKFLSKGRKKAKTSSRKGSSKDENATKARTSSE 531
Query: 158 -----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
G+ Q+ QKE++KKF+ G +N L+ATS+GEEGLDIGE+DL+ICFD+ SPIK +QR
Sbjct: 532 DAQMKGMNQKLQKELIKKFKEGIYNVLVATSIGEEGLDIGEVDLIICFDSTSSPIKNIQR 591
Query: 213 LGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAH 272
+GRTGRKR+G+ VILL G E F +M + I+ NK I +L ++ R+IP+
Sbjct: 592 MGRTGRKRDGK-VILLFAGSEEQKFDKAMNGYEFIQNHIMQNKLI--SLCQSD-RIIPSR 647
Query: 273 VTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKKLETDGNSEPAGKQNKTNAKKT 332
P ++ I + KP+ + E ++ + D +S+ G + K KK
Sbjct: 648 YKPTVETKFIDI------PKPNARIKTEEDEDEIIKLATMYMDKSSK--GTKRKKTPKKL 699
Query: 333 KKQPMMTQSNDIRTCFENIT 352
+K+ M +++ T F ++T
Sbjct: 700 EKRFFM--PDNVETGFRSVT 717
>gi|444705581|gb|ELW46990.1| Fanconi anemia group M protein [Tupaia chinensis]
Length = 526
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 153 VGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
+G+ Q+ +++K+FR G +NTL++T VGEEGLDIGE+DL+ICFDAQKSPI++VQR
Sbjct: 267 LGEELAAIQKTYIQVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLVQR 326
Query: 213 LGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAH 272
+GRTGRKR GR V++L +GRE + S Q+ K + K I+ + + PRM+P
Sbjct: 327 MGRTGRKRQGRIVVILAEGREERTYNQS-QSNKRNIYKAISGNRQVLHFYQGSPRMVPDG 385
Query: 273 VTPRIKCLHI 282
V P + + I
Sbjct: 386 VNPELHKMFI 395
>gi|448087512|ref|XP_004196346.1| Piso0_005803 [Millerozyma farinosa CBS 7064]
gi|359377768|emb|CCE86151.1| Piso0_005803 [Millerozyma farinosa CBS 7064]
Length = 952
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 155/327 (47%), Gaps = 67/327 (20%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQ---QLKPKLD 85
+ + + L L YG+RSFYN E KE K N+ ++ Q +
Sbjct: 360 LQILNVVGQGLRRLSIYGVRSFYNYFSEKHKE-----FTTKFNNKKSTNQTAAKFYYHDS 414
Query: 86 IN--IMSSEYAWSHLKFI---RLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVL 140
IN +M E S FI +L ++E + +KVIIF +R +I ++L
Sbjct: 415 INQLLMECEDVLSKDNFIGHPKLEILIEQIKKFFDNNTTDSKVIIFTEFRESALDIVNLL 474
Query: 141 KPLEPMVKASMFVGQSS------------------------------------------- 157
+ +K +F+GQ+
Sbjct: 475 ENSGDNIKPHIFIGQAKEREKFDEEKFLSKGRKKAKTSSRKGSSKDDNATKARTSSEDAQ 534
Query: 158 --GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
G+ Q+ QKE++KKF+ G +N L+ATS+GEEGLDIGE+DL+ICFD+ SPIK +QR+GR
Sbjct: 535 LKGMNQKLQKELIKKFKEGVYNVLVATSIGEEGLDIGEVDLIICFDSTSSPIKNIQRMGR 594
Query: 216 TGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTP 275
TGRKR+G+ VILL G E F +M + I+ NK I +L ++ R+IP+ P
Sbjct: 595 TGRKRDGK-VILLFAGSEEQKFDKAMNGYEFIQNHIMQNKLI--SLCQSD-RIIPSRYKP 650
Query: 276 RIKCLHIVVKDRVTPAKPSKKKPKENE 302
++ I + P + ++ K +E+E
Sbjct: 651 TVETKFIEI-----PKQNARIKTEEDE 672
>gi|413925498|gb|AFW65430.1| hypothetical protein ZEAMMB73_814845, partial [Zea mays]
Length = 803
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 108/181 (59%), Gaps = 8/181 (4%)
Query: 136 IFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEID 195
+F+V+ P+V Q G +Q+ Q+ I+KKFR+G +N L+ATS+GEEGLDI E+D
Sbjct: 76 VFEVM--CCPVVLGVHLGNQLKGQSQKTQQAILKKFRSGVYNVLVATSIGEEGLDIIEVD 133
Query: 196 LVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNK 255
LVICFDA SP++M+QR+GRTGRK GR V+L +G+E ++ C++ + K+++N
Sbjct: 134 LVICFDANVSPLRMIQRMGRTGRKNEGRVVVLAYEGQELQGYRKKQGDCRT-MRKLLHNS 192
Query: 256 SIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKKLETD 315
+ A PRM+P P +K + + + + AK + KE A+ K E D
Sbjct: 193 ERFEYHA--SPRMVPHVYKPEVKYVKLTIDKYIPHAKKMRVAAKE---ASPIPWKMSEAD 247
Query: 316 G 316
G
Sbjct: 248 G 248
>gi|393226114|gb|EJD33934.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 574
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 137/261 (52%), Gaps = 33/261 (12%)
Query: 33 HSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSSE 92
HSLA+A+ L +G K + P K D + LLQ D
Sbjct: 291 HSLATAMNRLEGFG----------AYKHQRTLPAYTKTPDYKKLLQ------DFTNEKKR 334
Query: 93 YAWSHLKFIRLREILESHFR--LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
H K +LRE+L +F + T K I+F + R V EI + L EP ++ +
Sbjct: 335 GTLVHPKMQKLRELLLDYFGAPVAGSSSATQKAIVFVSLRSCVDEIVEYLTGEEPTIRPA 394
Query: 151 MFVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
FVGQ + G+ +Q ++++F++ N LI+TS+GEEGLDIGE+DL+IC++
Sbjct: 395 RFVGQGTDNKGGKGILISQQ--LIQQFQSSNVNVLISTSIGEEGLDIGEVDLIICYETPS 452
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKN 264
SPI+ +QR GRTGR+R+G+ ++L+T+ RE N+ T Q V+ I +S + L ++
Sbjct: 453 SPIRGLQRAGRTGRQRDGQLILLMTENREEGNW-TKAQEKYEQVQSAI--QSAHYKLHQD 509
Query: 265 GPRMIPAHVTPRIKCLHIVVK 285
+++P P + C+ +V+
Sbjct: 510 PLQLLP----PDMTCIERIVE 526
>gi|344305379|gb|EGW35611.1| hypothetical protein SPAPADRAFT_48591 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1151
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 52/289 (17%)
Query: 42 LVTYGLRSFYNNLVEVSKE---DGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHL 98
L YG+RSFY E E S + D + ++Q+ + D ++ + +SH
Sbjct: 366 LNIYGVRSFYTYFNEKYNEFKGKKSKSQINSDFYFSDEIKQVLKRSD-EVLKGK-GYSHP 423
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS- 157
K L + L F ++VIIF YR EI ++ E +K +F+GQS
Sbjct: 424 KIETLMDELTDFFADGV--SSDSRVIIFTEYRESALEIVQCIERTETNLKPHIFIGQSKE 481
Query: 158 ----------------------------------------GVTQQEQKEIMKKFRAGEFN 177
G+ Q+ QKEI+KKF+AG +N
Sbjct: 482 KERFDETKSKTKGKSKKRAHDGDDDVRDSTRTSSEDAQIKGMNQKLQKEIIKKFKAGAYN 541
Query: 178 TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNF 237
L+ATS+GEEGLDIGE+DL+IC+D+ SPIK +QR+GRTGRKR+G+ V+L + E F
Sbjct: 542 ILVATSIGEEGLDIGEVDLIICYDSTSSPIKNIQRMGRTGRKRDGKVVLLFSSNEEL-KF 600
Query: 238 QTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKD 286
+M + Y+++ I + ++N R+IP TP++ I + D
Sbjct: 601 DKAMAGYE-YIQQHIQKGDLITLCSRN--RIIPDIYTPKVVEQFIEIPD 646
>gi|354547651|emb|CCE44386.1| hypothetical protein CPAR2_401880 [Candida parapsilosis]
Length = 1048
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 47/232 (20%)
Query: 87 NIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM 146
N +SS+ A+SH K L E LE F+ + ++++VIIF +R EI ++
Sbjct: 450 NAISSQ-AFSHPKIEALMEELEDFFQEKCDD-DSSRVIIFTEFRESALEIVKSIEKEGKQ 507
Query: 147 VKASMFVGQS-----------------------------------------SGVTQQEQK 165
K +F+GQ+ SG+ Q+ QK
Sbjct: 508 FKPHIFIGQAKEKEKFDVENFGQKKGAKKKSKKDVNDERDSLRTSSENAQISGMNQKLQK 567
Query: 166 EIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV 225
EI+KKF+ GE+N L+ATS+GEEGLDIGE+DL++C+D+ SPIK +QR+GRTGRKR+G+ V
Sbjct: 568 EIIKKFKNGEYNILVATSIGEEGLDIGEVDLIVCYDSTSSPIKNIQRMGRTGRKRDGK-V 626
Query: 226 ILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
+LL E F +M + Y++ I + +N R+IP TP++
Sbjct: 627 LLLFSSNEESKFDKAMAGYE-YIQDHIMKGDLITLCPQN--RIIPEQYTPQV 675
>gi|242398676|ref|YP_002994100.1| ATP-dependent RNA helicase, [Thermococcus sibiricus MM 739]
gi|242265069|gb|ACS89751.1| ATP-dependent RNA helicase, putative [Thermococcus sibiricus MM
739]
Length = 772
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 122/207 (58%), Gaps = 23/207 (11%)
Query: 35 LASALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKDNDLQNLLQ--QLKPKLDINIM 89
L A+E L T GL R++ L E SK+ G+ + L+Q ++K + + +
Sbjct: 282 LHHAIELLETQGLSALRAYLKKLYEESKK-------GRAKSTKELIQDPRMKKAVALLVQ 334
Query: 90 SSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKA 149
+ E H K +L+E++ S + K ++K+I+F NYR +I L LE +KA
Sbjct: 335 AKELGLDHPKLDKLKELIRSQLK----KKPSSKIIVFTNYRETAKKIVKEL--LEDHIKA 388
Query: 150 SMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
FVGQ+S G++Q++QK+++ F GEFN L+ATSVGEEGLD+ E+DLVI ++
Sbjct: 389 VRFVGQASKENDKGLSQKKQKQVLNLFSQGEFNVLVATSVGEEGLDVPEVDLVIFYEPVP 448
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLTQG 231
S I+ +QR GRTGR + GR VIL+ +G
Sbjct: 449 SAIRSIQRKGRTGRHKPGRVVILMAKG 475
>gi|448529774|ref|XP_003869912.1| Mph1 protein [Candida orthopsilosis Co 90-125]
gi|380354266|emb|CCG23779.1| Mph1 protein [Candida orthopsilosis]
Length = 1067
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 121/231 (52%), Gaps = 46/231 (19%)
Query: 87 NIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM 146
N +SS+ +SH K L E LE F ++ +++VIIF +R EI ++
Sbjct: 447 NAISSQ-EFSHPKIEALMEELEDFFHEKSDDA-SSRVIIFTEFRESALEIVKSIEKASQS 504
Query: 147 VKASMFVGQS----------------------------------------SGVTQQEQKE 166
K +F+GQ+ SG+ Q+ QKE
Sbjct: 505 FKPHIFIGQAKEKEKFEVENFGKKKGTKKKSKKEDNGRDSSRTSSENAQISGMNQKLQKE 564
Query: 167 IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVI 226
I+KKF+ GE+N L+ATS+GEEGLDIGE+DL++C+D+ SPIK +QR+GRTGRKR+G+ ++
Sbjct: 565 IIKKFKNGEYNILVATSIGEEGLDIGEVDLIVCYDSTSSPIKNIQRMGRTGRKRDGKVLL 624
Query: 227 LLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
L + E+ F +M + Y++ I + +N R+IP TP++
Sbjct: 625 LFSSNEESK-FDKAMAGYE-YIQDHIMKGDLITLCPQN--RIIPDQYTPQV 671
>gi|300121739|emb|CBK22314.2| unnamed protein product [Blastocystis hominis]
Length = 754
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 105/201 (52%), Gaps = 56/201 (27%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKA------- 149
H K RLRE L HFR +A G T+VI+FA YR V EI + L+ E M++A
Sbjct: 371 HPKLERLREFLIDHFRRNAAAGRETRVIVFAQYRSSVQEILNFLRG-EKMIRATAFVGQQ 429
Query: 150 -----------------------------------SMFVGQSS-------------GVTQ 161
S F G+ S G +Q
Sbjct: 430 KRNTDVAMVGEDGEPTAEHLYPDEIVPNTAHRTISSYFGGRESLPAVTSVPFIQVNGQSQ 489
Query: 162 QEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN 221
++Q+EI++ F+AG+FN L+AT + EEGLDIGE+DL++C++ S +++QR GRTGRKR+
Sbjct: 490 KQQQEILRDFKAGKFNVLVATCIAEEGLDIGEVDLLVCYEGISSSTRLLQRKGRTGRKRS 549
Query: 222 GRCVILLTQGREAHNFQTSMQ 242
GR V+LLT+G E + S+Q
Sbjct: 550 GRVVMLLTEGAEYQKHRRSLQ 570
>gi|241954988|ref|XP_002420215.1| ATP-dependent RNA helicase, helicase; DEAD box helicase, putative
[Candida dubliniensis CD36]
gi|223643556|emb|CAX42438.1| ATP-dependent RNA helicase, helicase [Candida dubliniensis CD36]
Length = 1132
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 49/239 (20%)
Query: 89 MSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVK 148
+S + H K L E L+ F+ H G +KVIIF +R EI ++ K
Sbjct: 422 LSKSLTYGHPKIEALMEELDDFFKNHETAG--SKVIIFTEFRESALEIVQCIEKAGDNRK 479
Query: 149 ASMFVGQS---------------------------------------SGVTQQEQKEIMK 169
+F+GQS +G++Q+ QKEI+K
Sbjct: 480 PHIFIGQSKEREKFDVENFGKKKQKGQTKKKKDERPSTRSSSENAQLTGMSQKLQKEIIK 539
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
KF+ G FN L+ATS+GEEGLDIGE+DL+IC+D+ SPIK +QR+GRTGRKR+G+ ++L +
Sbjct: 540 KFKQGVFNILVATSIGEEGLDIGEVDLIICYDSTSSPIKNIQRMGRTGRKRDGKVLMLFS 599
Query: 230 QGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGP--RMIPAHVTPRIKCLHIVVKD 286
E+ F +M + Y+++ I + +L + P RMIP P + I + D
Sbjct: 600 SNEESK-FDKAMGGYE-YIQQHI----MKGDLIQLRPQHRMIPDEYKPEVVKQFIQIPD 652
>gi|337284763|ref|YP_004624237.1| Hef nuclease [Pyrococcus yayanosii CH1]
gi|334900697|gb|AEH24965.1| Hef nuclease [Pyrococcus yayanosii CH1]
Length = 751
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 135/241 (56%), Gaps = 17/241 (7%)
Query: 18 NRDLDRMIQRDFH-VTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNL 76
N DL R++ +H + L A+E L T GL + L ++ +E + I +++
Sbjct: 266 NHDLGRLLL--YHAMALKLHHAIELLETQGLSALRVYLKKLYEEAKAGRIKASRELFRDM 323
Query: 77 LQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEI 136
++K + + + + E H K +L+E+L +K +KVI+F NYR ++
Sbjct: 324 --RMKKAISLLVQARELGLDHPKIDKLKELLREQL----DKKRASKVIVFTNYRETAKKL 377
Query: 137 FDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDI 191
+ L + +KA FVGQ+S G++Q+EQK I+ F G+FN L+ATSVGEEGLD+
Sbjct: 378 VEELSRMG--LKARRFVGQASREGDRGMSQREQKAILDAFARGDFNVLVATSVGEEGLDV 435
Query: 192 GEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEK 250
E+D+V+ ++ S I+ VQR GRTGR + GR VIL+ +G R+ + +S Q + VE
Sbjct: 436 PEVDMVVFYEPVPSAIRSVQRRGRTGRHKPGRVVILMARGTRDEAYYWSSRQKERLMVET 495
Query: 251 I 251
I
Sbjct: 496 I 496
>gi|255729652|ref|XP_002549751.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132820|gb|EER32377.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 1162
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 133/284 (46%), Gaps = 56/284 (19%)
Query: 42 LVTYGLRSFYNNLVEVSKE-------DGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYA 94
L YG+R FY E E S L D + + L K+ I EY
Sbjct: 371 LNIYGIRYFYEYFHEKFTEFKTKWNAKKSTNKLNADFYFSDTITTLLEKVPKMIEDCEY- 429
Query: 95 WSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
SH K L L F H + +KVIIF +R EI ++ K +F+G
Sbjct: 430 -SHPKIEALMNELSDFFEHH--QTADSKVIIFTEFRGSALEIVQSIEKAGDNRKPHIFIG 486
Query: 155 QS-----------------------------------------SGVTQQEQKEIMKKFRA 173
Q+ SG+ Q+ QKE++KKF+
Sbjct: 487 QAKEKEKFDVENFGKKKSKQKGGKKPKNDERPSGRTSSEAAQISGMNQKVQKEVIKKFKN 546
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
GE+N L+ATS+GEEGLDIGE+DL+IC+D+ SPIK VQR+GRTGRKR+G+ ++L + E
Sbjct: 547 GEYNILVATSIGEEGLDIGEVDLIICYDSTSSPIKNVQRMGRTGRKRDGKVLLLFSSNEE 606
Query: 234 AHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
+ F +M + Y+++ I ++ +N R+IP +P +
Sbjct: 607 SK-FDKAMGGYE-YIQQRIMKGDLFQLRPQN--RIIPESFSPEV 646
>gi|363752227|ref|XP_003646330.1| hypothetical protein Ecym_4473 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889965|gb|AET39513.1| hypothetical protein Ecym_4473 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1011
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 95/131 (72%), Gaps = 5/131 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q +G++Q++QKE++ KF+ GE+N L+ TS+GEEGLDIGE+D++IC+D SPIK +QR+
Sbjct: 546 AQITGMSQKQQKEVISKFKKGEYNVLVCTSIGEEGLDIGEVDMIICYDTTSSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+GR V+LL+ E++ F+ +M+ + ++++I SI +A R+IPA++
Sbjct: 606 GRTGRKRDGRIVLLLSDN-ESNKFEKAMED-YAQLQRLIGQGSINYKVAD---RIIPANM 660
Query: 274 TPRIKCLHIVV 284
P+ + I V
Sbjct: 661 NPKCQKEFITV 671
>gi|123402170|ref|XP_001302001.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121883246|gb|EAX89071.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 790
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 93/143 (65%), Gaps = 10/143 (6%)
Query: 96 SHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ 155
SH K ++L ILE F ++E ++ I+F N+R V ++ +K + P VK S+F G+
Sbjct: 383 SHPKLVKLTLILEDFFAKNSE----SRCIVFTNFRDVAKDLESHIKQI-PNVKCSVFTGK 437
Query: 156 S-----SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
+ G+ ++ Q+ I+ FR G N +IAT V EEGLDIGE+DL+IC+D Q SP++ V
Sbjct: 438 AVTNTDEGLNEKVQQAIVGLFRKGNINLIIATCVAEEGLDIGEVDLIICYDTQSSPLRTV 497
Query: 211 QRLGRTGRKRNGRCVILLTQGRE 233
QR+GRTGRKR G + L+T+G E
Sbjct: 498 QRMGRTGRKRAGHVIFLMTEGIE 520
>gi|308198038|ref|XP_001387028.2| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|149389001|gb|EAZ63005.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 941
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 51/294 (17%)
Query: 35 LASALENLVTYGLRSF-------YNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDIN 87
+ L YGLRSF Y + + S L D ++QL ++
Sbjct: 297 VGQCFRRLNVYGLRSFFSYFNEKYTEFMAKHSKKKSSNKLNADFYFSEPIKQLMKRIR-T 355
Query: 88 IMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMV 147
++ +SH K + E L+ F ++ +KVIIF +R EI ++ + +
Sbjct: 356 MIDDPKVFSHPKIEAMMEELDEFFTIN--NATDSKVIIFTEFRESALEIVRFIEKVGKNL 413
Query: 148 KASMFVGQS-------------------------------------SGVTQQEQKEIMKK 170
K +F+GQ+ +G+ Q+ QKEI+K
Sbjct: 414 KPHIFIGQAKERDKFDESNFGKKSKGKRVGKKQQDDSKSSSENAQINGMNQKLQKEIIKN 473
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
F+ G +N L+ATS+GEEGLDIGE+DL+IC+D+ SPIK +QR+GRTGRKR+G+ V+L +
Sbjct: 474 FKQGTYNILVATSIGEEGLDIGEVDLIICYDSTSSPIKNIQRMGRTGRKRDGKVVLLFSS 533
Query: 231 GREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVV 284
E+ F +M + + I+ + I K RMIP P+++ I +
Sbjct: 534 NEES-KFDKAMNGYEYIQQHIMKGQLID---LKEQNRMIPKDWEPKVEMRFIEI 583
>gi|284018161|sp|A3GH78.3|MPH1_PICST RecName: Full=ATP-dependent DNA helicase MPH1
Length = 1050
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 51/294 (17%)
Query: 35 LASALENLVTYGLRSF-------YNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDIN 87
+ L YGLRSF Y + + S L D ++QL ++
Sbjct: 361 VGQCFRRLNVYGLRSFFSYFNEKYTEFMAKHSKKKSSNKLNADFYFSEPIKQLMKRIR-T 419
Query: 88 IMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMV 147
++ +SH K + E L+ F ++ +KVIIF +R EI ++ + +
Sbjct: 420 MIDDPKVFSHPKIEAMMEELDEFFTIN--NATDSKVIIFTEFRESALEIVRFIEKVGKNL 477
Query: 148 KASMFVGQS-------------------------------------SGVTQQEQKEIMKK 170
K +F+GQ+ +G+ Q+ QKEI+K
Sbjct: 478 KPHIFIGQAKERDKFDESNFGKKSKGKRVGKKQQDDSKSSSENAQINGMNQKLQKEIIKN 537
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
F+ G +N L+ATS+GEEGLDIGE+DL+IC+D+ SPIK +QR+GRTGRKR+G+ V+L +
Sbjct: 538 FKQGTYNILVATSIGEEGLDIGEVDLIICYDSTSSPIKNIQRMGRTGRKRDGKVVLLFSS 597
Query: 231 GREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVV 284
E+ F +M + + I+ + I K RMIP P+++ I +
Sbjct: 598 NEES-KFDKAMNGYEYIQQHIMKGQLID---LKEQNRMIPKDWEPKVEMRFIEI 647
>gi|254585207|ref|XP_002498171.1| ZYRO0G03938p [Zygosaccharomyces rouxii]
gi|238941065|emb|CAR29238.1| ZYRO0G03938p [Zygosaccharomyces rouxii]
Length = 1006
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 91/133 (68%), Gaps = 5/133 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q++G+TQ++QKE+++KF+ GE+N L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 546 AQANGMTQKQQKEVIQKFKDGEYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+GR +ILL E++ F +M+ + + I N Y + R+IPA V
Sbjct: 606 GRTGRKRDGR-IILLFSSNESNKFDQAMKDYANLQKVITQNILEY----QKSDRIIPADV 660
Query: 274 TPRIKCLHIVVKD 286
P+ + I + +
Sbjct: 661 DPQCREQFITISE 673
>gi|14591755|ref|NP_143722.1| Hef nuclease [Pyrococcus horikoshii OT3]
Length = 748
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 136/244 (55%), Gaps = 23/244 (9%)
Query: 18 NRDLDRMIQRDFH-VTHSLASALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKDNDL 73
N DL +++ FH + L A+E L T GL R + L E +K GS + +
Sbjct: 269 NHDLRKLLL--FHAMALKLHHAIELLETQGLSALRVYLKRLYEEAKA-GST----RASKE 321
Query: 74 QNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVV 133
L +++K L + I + E H K E+L+ R ++ E +K+I+F NYR
Sbjct: 322 LFLDKRMKKALALLIQAKELGIDHPKM----EVLKGLIREQLKRKENSKIIVFTNYRETA 377
Query: 134 AEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
++ + L ++ +KA FVGQ+S G++Q+EQK I+ F EFN L+ATSVGEEG
Sbjct: 378 KKVVEEL--MKDGIKARRFVGQASRENDRGMSQKEQKLILDAFARSEFNVLVATSVGEEG 435
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSY 247
LD+ E+DLVI ++ S I+ VQR GRTGR++ GR VIL+ QG R+ + +S Q K
Sbjct: 436 LDVPEVDLVIFYEPVPSAIRSVQRRGRTGRQKPGRVVILMAQGTRDEAYYWSSRQKEKIM 495
Query: 248 VEKI 251
E I
Sbjct: 496 RETI 499
>gi|33359440|ref|NP_877878.1| ERCC4-like helicase/ERCC4-type nuclease [Pyrococcus horikoshii OT3]
gi|3258336|dbj|BAA31019.1| 650aa long hypothetical ATP-dependent RNA helicase [Pyrococcus
horikoshii OT3]
Length = 650
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 136/244 (55%), Gaps = 23/244 (9%)
Query: 18 NRDLDRMIQRDFH-VTHSLASALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKDNDL 73
N DL +++ FH + L A+E L T GL R + L E +K GS + +
Sbjct: 269 NHDLRKLLL--FHAMALKLHHAIELLETQGLSALRVYLKRLYEEAKA-GST----RASKE 321
Query: 74 QNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVV 133
L +++K L + I + E H K E+L+ R ++ E +K+I+F NYR
Sbjct: 322 LFLDKRMKKALALLIQAKELGIDHPKM----EVLKGLIREQLKRKENSKIIVFTNYRETA 377
Query: 134 AEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
++ + L ++ +KA FVGQ+S G++Q+EQK I+ F EFN L+ATSVGEEG
Sbjct: 378 KKVVEEL--MKDGIKARRFVGQASRENDRGMSQKEQKLILDAFARSEFNVLVATSVGEEG 435
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSY 247
LD+ E+DLVI ++ S I+ VQR GRTGR++ GR VIL+ QG R+ + +S Q K
Sbjct: 436 LDVPEVDLVIFYEPVPSAIRSVQRRGRTGRQKPGRVVILMAQGTRDEAYYWSSRQKEKIM 495
Query: 248 VEKI 251
E I
Sbjct: 496 RETI 499
>gi|403331000|gb|EJY64418.1| DEAD/DEAH box RNA helicase, putative [Oxytricha trifallax]
Length = 900
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 123/219 (56%), Gaps = 15/219 (6%)
Query: 34 SLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS-- 91
S+ A + L +G SF + +V + KD N ++ +K D M S
Sbjct: 283 SMCHAKQLLAVHGTESFSDYIVNF------FDVTKKDKKHVNFIKAIKESEDYKDMISYI 336
Query: 92 ---EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVL-KPLEPMV 147
+ +H K +L EIL+ FR K +KVI+F+ +R EI L + E +V
Sbjct: 337 EETKQTKNHPKLKKLSEILDLFFRDETHKD--SKVIVFSQFRESANEIKRYLVRKNEGVV 394
Query: 148 KASMFVGQSS-GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
A +FVGQ++ G++Q+ Q ++++F+ G+ NTL+AT V EEGLDIG +DL+I +D SP
Sbjct: 395 HAEVFVGQNNNGLSQKVQAAMIQRFKTGKTNTLVATCVAEEGLDIGNVDLIISYDCLASP 454
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCK 245
I+M+QR GRTGR G+ ++L+ +G E + F+ S + K
Sbjct: 455 IRMIQRFGRTGRAGCGQVIVLIAKGEEENKFKMSRKNSK 493
>gi|68481063|ref|XP_715573.1| hypothetical protein CaO19.2919 [Candida albicans SC5314]
gi|74679884|sp|Q5A1A0.1|MPH1_CANAL RecName: Full=ATP-dependent DNA helicase MPH1
gi|46437201|gb|EAK96552.1| hypothetical protein CaO19.2919 [Candida albicans SC5314]
Length = 1187
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 98/185 (52%), Gaps = 41/185 (22%)
Query: 89 MSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVK 148
+S + H K L E L+ F+ H G ++VIIF +R EI ++ K
Sbjct: 469 LSKTLTYGHPKIEALMEELDDFFKNHETAG--SRVIIFTEFRESALEIVQCIEKANDNRK 526
Query: 149 ASMFVGQS---------------------------------------SGVTQQEQKEIMK 169
+F+GQS +G++Q+ QKEI+K
Sbjct: 527 PHIFIGQSKEKEKFDVENFGKKKQKGQTKKKKDERPSTRSSSENAQMTGMSQKLQKEIIK 586
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
KF+ G FN L+ATS+GEEGLDIGE+DL+IC+D+ SPIK +QR+GRTGRKR+G+ ++L +
Sbjct: 587 KFKKGVFNILVATSIGEEGLDIGEVDLIICYDSTSSPIKNIQRMGRTGRKRDGKVLMLFS 646
Query: 230 QGREA 234
E+
Sbjct: 647 SNEES 651
>gi|68480950|ref|XP_715628.1| hypothetical protein CaO19.10436 [Candida albicans SC5314]
gi|46437260|gb|EAK96610.1| hypothetical protein CaO19.10436 [Candida albicans SC5314]
Length = 1187
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 98/185 (52%), Gaps = 41/185 (22%)
Query: 89 MSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVK 148
+S + H K L E L+ F+ H G ++VIIF +R EI ++ K
Sbjct: 469 LSKTLTYGHPKIEALMEELDDFFKNHETAG--SRVIIFTEFRESALEIVQCIEKANDNRK 526
Query: 149 ASMFVGQS---------------------------------------SGVTQQEQKEIMK 169
+F+GQS +G++Q+ QKEI+K
Sbjct: 527 PHIFIGQSKEKEKFDVENFGKKKQKGQTKKKKDERPSTRSSSENAQMTGMSQKLQKEIIK 586
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
KF+ G FN L+ATS+GEEGLDIGE+DL+IC+D+ SPIK +QR+GRTGRKR+G+ ++L +
Sbjct: 587 KFKKGVFNILVATSIGEEGLDIGEVDLIICYDSTSSPIKNIQRMGRTGRKRDGKVLMLFS 646
Query: 230 QGREA 234
E+
Sbjct: 647 SNEES 651
>gi|238881270|gb|EEQ44908.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 904
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 117/239 (48%), Gaps = 50/239 (20%)
Query: 42 LVTYGLRSFYNNLVEVSKE-------DGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYA 94
L YG+RSF N E E S L D + + L +++ +S
Sbjct: 417 LNIYGIRSFQNYFNEKFLEFKTKWNAKKSTNKLNADFYFSDPITTLMDRVEE--LSKTLT 474
Query: 95 WSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG 154
+ H K L E L+ F+ H G ++VIIF +R EI ++ K +F+G
Sbjct: 475 YGHPKIEALMEELDDFFKNHETAG--SRVIIFTEFRESALEIVQCIEKANDNRKPHIFIG 532
Query: 155 QS---------------------------------------SGVTQQEQKEIMKKFRAGE 175
QS +G++Q+ QKEI+KKF+ G
Sbjct: 533 QSKEKEKFDVENFGKKKQKGQTKKKKDERPSTRSSSENAQMTGMSQKLQKEIIKKFKKGV 592
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREA 234
FN L+ATS+GEEGLDIGE+DL+IC+D+ SPIK +QR+GRTGRKR+G+ ++L + E+
Sbjct: 593 FNILVATSIGEEGLDIGEVDLIICYDSTSSPIKNIQRMGRTGRKRDGKVLMLFSSNEES 651
>gi|375084016|ref|ZP_09731027.1| Hef nuclease [Thermococcus litoralis DSM 5473]
gi|374741315|gb|EHR77742.1| Hef nuclease [Thermococcus litoralis DSM 5473]
Length = 771
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 121/216 (56%), Gaps = 23/216 (10%)
Query: 35 LASALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKDNDLQNLLQ--QLKPKLDINIM 89
L A+E L T GL R++ L E +K GK + L+Q ++K + + +
Sbjct: 282 LHHAIELLETQGLSALRAYLKKLYEEAKR-------GKTKSTKELMQDQRMKKAIALLVQ 334
Query: 90 SSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKA 149
+ E H K +++E+++ K +K+I+F NYR +I L L+ +K+
Sbjct: 335 AKELGIDHPKLDKMKELIKEQL----SKKPASKIIVFTNYRETAKKIVKEL--LQEQIKS 388
Query: 150 SMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
FVGQ++ G++Q++QK+I+ F GEFN L+ATSVGEEGLD+ E+DLVI ++
Sbjct: 389 MRFVGQANKENDKGLSQKKQKQILDLFSQGEFNVLVATSVGEEGLDVPEVDLVIFYEPVP 448
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
S I+ +QR GRTGR R GR VIL+ +G + S
Sbjct: 449 SAIRSIQRRGRTGRHRPGRVVILMAKGTRDEAYYWS 484
>gi|298707926|emb|CBJ30312.1| DEAD box helicase similar to CG7922-PA [Ectocarpus siliculosus]
Length = 2654
Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 106/203 (52%), Gaps = 33/203 (16%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K I+L+E+L HF H G++T+ I+F R +E +V+A
Sbjct: 460 HPKLIKLKEVLREHFARHEAGGKSTRAIVFTQLR----------DSVEAVVRA------- 502
Query: 157 SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
F +GEFN L+AT + EEGLDIGE+DL++ FDA SP++MVQR+GRT
Sbjct: 503 --------------FFSGEFNCLVATCIAEEGLDIGEVDLIVSFDALNSPVRMVQRMGRT 548
Query: 217 GRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPR 276
GRKR G+ V+L+T+G E + S KS + K + + P M+P PR
Sbjct: 549 GRKRAGKVVVLVTEGSEESKLRNSNSKSKSITRALQTRKDKFDMYQDDDP-MVPPGPRPR 607
Query: 277 -IKCLHIVVKDRVTPAKPSKKKP 298
+K ++++ ++ +KKP
Sbjct: 608 MVKQEMVIMEYHLSQVGGHQKKP 630
>gi|123495150|ref|XP_001326674.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121909592|gb|EAY14451.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 871
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 13/179 (7%)
Query: 96 SHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ 155
SH K +L IL F + ++ I+FA+ R V A+I +K + P V +F G+
Sbjct: 384 SHPKLAKLHSILSDFFSTKKD----SRCIVFASLREVAADIEKNIKNV-PNVNCHVFTGK 438
Query: 156 SS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
++ G+T Q+ I+ FR G FN +IAT V EEGLDIGE+DL++C+D Q S ++
Sbjct: 439 AATDDTEGMTDHMQQTIVDLFRKGTFNVIIATCVAEEGLDIGEVDLIVCYDVQASALRTF 498
Query: 211 QRLGRTGRKRNGRCVILLTQGREAHNFQTSMQT---CKSYVEKIINNKSIYANLAKNGP 266
QR+GRTGRKR GR V L+++G E + ++ T K + K I+ +Y L N P
Sbjct: 499 QRIGRTGRKRAGRVVFLISEGVEERALKKALNTKTQVKDLLTKSISRFVLYKPLVPNLP 557
>gi|403216112|emb|CCK70610.1| hypothetical protein KNAG_0E03530 [Kazachstania naganishii CBS
8797]
Length = 979
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 86/123 (69%), Gaps = 5/123 (4%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q +G+TQ++QK+I+ +F+ GE+N LI TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 546 AQINGMTQKQQKDIIHRFKQGEYNVLICTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+GR ++LL E F+ +M+ S ++K+I I K R++P +
Sbjct: 606 GRTGRKRHGR-IMLLFSSNEERKFEKAMEDY-SNLQKLIGQNYI---TYKKSDRILPPEI 660
Query: 274 TPR 276
TPR
Sbjct: 661 TPR 663
>gi|156836937|ref|XP_001642507.1| hypothetical protein Kpol_328p1 [Vanderwaltozyma polyspora DSM
70294]
gi|189082207|sp|A7TSV4.1|MPH1_VANPO RecName: Full=ATP-dependent DNA helicase MPH1
gi|156113045|gb|EDO14649.1| hypothetical protein Kpol_328p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 1012
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 89/131 (67%), Gaps = 7/131 (5%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q++QKE++ KF+ G++N L+ TS+GEEGLDIGE+D++ICFD SPIK +QR+
Sbjct: 546 AQISGMNQKQQKEVISKFKNGDYNVLVCTSIGEEGLDIGEVDMIICFDTTGSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ ++LL G E+ F+ +M+ I N Y K R++P+++
Sbjct: 606 GRTGRKRDGK-ILLLFSGNESRKFEKAMEDYYDLQRLIGQNFVEY----KKSDRILPSNI 660
Query: 274 TP--RIKCLHI 282
TP R + +HI
Sbjct: 661 TPECRKEFIHI 671
>gi|123454959|ref|XP_001315228.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121897898|gb|EAY03005.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 955
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 33/212 (15%)
Query: 32 THSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLL------QQLKPKLD 85
T L E L Y +++F + + E D S + +DLQ +L +Q+ PK++
Sbjct: 273 TMKLLKFREYLQNYSIKTFVDAVTEFIT-DKSTRDVDLVSDLQPILSAAQKQRQIDPKME 331
Query: 86 INIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEP 145
+L EI+ E + +++IIF N+R +V +I L +
Sbjct: 332 ----------------KLCEIVVDFL----EATKESRIIIFCNFRNIVQDIVTALSS-KS 370
Query: 146 MVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICF 200
+VK S F+GQS+ G+ Q Q +++ FR G +N L+AT++GEEGLDIGE+DL+IC+
Sbjct: 371 IVKVSEFIGQSNSGGTKGLNQSRQINLIQSFRRGIYNVLVATAIGEEGLDIGEVDLIICY 430
Query: 201 DAQKSPIKMVQRLGRTGRKRNGRCVILLTQGR 232
D QKS + +QR+GRTGRKR+G+ + LL+ +
Sbjct: 431 DVQKSITRTIQRMGRTGRKRDGKVIFLLSDAQ 462
>gi|380741022|tpe|CCE69656.1| TPA: hef nuclease [Pyrococcus abyssi GE5]
Length = 749
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 129/232 (55%), Gaps = 22/232 (9%)
Query: 18 NRDLDRMIQRDFH-VTHSLASALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKDNDL 73
N DL +++ FH + L A+E L T GL R + L E +K GS + +
Sbjct: 266 NHDLRKLLL--FHAMALKLHHAIELLETQGLSALRVYLKKLYEEAK-TGST----RASKE 318
Query: 74 QNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVV 133
L +++K L + I + E H K L+E+++ K E +K+I+F NYR
Sbjct: 319 LFLDRRMKKALALLIQAKELGIDHPKMEVLKELVKEQL----SKKENSKIIVFTNYRETA 374
Query: 134 AEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
++ + L + +KA FVGQ++ G++Q+EQK I+ F GEFN L+ATSVGEEG
Sbjct: 375 RKVVEELT--KEGIKAKRFVGQATKENDRGMSQREQKLILDSFARGEFNVLVATSVGEEG 432
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
LD+ E+DLV+ ++ S I+ VQR GRTGR++ GR VIL+ QG + S
Sbjct: 433 LDVPEVDLVVFYEPVPSAIRSVQRRGRTGRQKPGRVVILIAQGTRDEAYYWS 484
>gi|14520497|ref|NP_125972.1| Hef nuclease [Pyrococcus abyssi GE5]
gi|5457712|emb|CAB49203.1| Putative ATP-dependent ERCC4-like helicase [Pyrococcus abyssi GE5]
Length = 752
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 129/232 (55%), Gaps = 22/232 (9%)
Query: 18 NRDLDRMIQRDFH-VTHSLASALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKDNDL 73
N DL +++ FH + L A+E L T GL R + L E +K GS + +
Sbjct: 269 NHDLRKLLL--FHAMALKLHHAIELLETQGLSALRVYLKKLYEEAK-TGST----RASKE 321
Query: 74 QNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVV 133
L +++K L + I + E H K L+E+++ K E +K+I+F NYR
Sbjct: 322 LFLDRRMKKALALLIQAKELGIDHPKMEVLKELVKEQL----SKKENSKIIVFTNYRETA 377
Query: 134 AEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
++ + L + +KA FVGQ++ G++Q+EQK I+ F GEFN L+ATSVGEEG
Sbjct: 378 RKVVEELT--KEGIKAKRFVGQATKENDRGMSQREQKLILDSFARGEFNVLVATSVGEEG 435
Query: 189 LDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
LD+ E+DLV+ ++ S I+ VQR GRTGR++ GR VIL+ QG + S
Sbjct: 436 LDVPEVDLVVFYEPVPSAIRSVQRRGRTGRQKPGRVVILIAQGTRDEAYYWS 487
>gi|57640956|ref|YP_183434.1| Hef nuclease [Thermococcus kodakarensis KOD1]
gi|57159280|dbj|BAD85210.1| helicase-associated endonuclease for fork-structured DNA
[Thermococcus kodakarensis KOD1]
Length = 804
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 126/226 (55%), Gaps = 23/226 (10%)
Query: 35 LASALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L ALE L T GL R++ L E K S L +D ++ ++ L + +
Sbjct: 283 LLHALELLETQGLTALRAYLKKLKE-DKRTKSSKELMEDPRMRKVIYLL-------VQAK 334
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
E H K +L+E+++ K ++K+I+F NYR +I + L+ + + A
Sbjct: 335 ESGLDHPKMEKLKELVKEQL----GKKPSSKIIVFTNYRDTGKKIVEELRSM--GITAER 388
Query: 152 FVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
F+GQ+S G++Q+EQKE++ +F GEFN L+ATSVGEEGLD+ E+DLV+ ++ S
Sbjct: 389 FIGQASRKDDRGMSQREQKEVLDRFSRGEFNVLVATSVGEEGLDVPEVDLVVFYEPVPSA 448
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKI 251
I+ +QR GRTGR R GR VIL+ +G R+ + S + K + I
Sbjct: 449 IRSIQRRGRTGRHRPGRVVILMAKGTRDEAYYWASRRKEKGMFDAI 494
>gi|401625242|gb|EJS43260.1| mph1p [Saccharomyces arboricola H-6]
Length = 990
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 27/190 (14%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q+ QKE++ F+ GE+N L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 546 AQISGMNQKVQKEVIHNFKKGEYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ ++LL E++ F+ +M+ S ++ +I+ + I K R+IP ++
Sbjct: 606 GRTGRKRDGK-IVLLFSSNESYKFERAMEDY-SNLQGLISKQCID---YKKSDRIIPENI 660
Query: 274 TPRIKCLHIVVKD---------------RVTPAKPSKKKPKENEKANKKSK-------KK 311
P + + I + D R KKPK N+ A +K K KK
Sbjct: 661 IPECRKVLITINDEDEVINEMEDVDEVIRYATQCMMGKKPKANKTATRKRKVRENKKAKK 720
Query: 312 LETDGNSEPA 321
GN E +
Sbjct: 721 FFMPGNVETS 730
>gi|367017778|ref|XP_003683387.1| hypothetical protein TDEL_0H03170 [Torulaspora delbrueckii]
gi|359751051|emb|CCE94176.1| hypothetical protein TDEL_0H03170 [Torulaspora delbrueckii]
Length = 1006
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 86/129 (66%), Gaps = 5/129 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q +G+TQ++QKE++ KF+ GE+N L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 550 AQLNGMTQKQQKEVIMKFKNGEYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 609
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+GR V+L + E+ F+ +M+ + I N Y K R+IP+ +
Sbjct: 610 GRTGRKRDGRIVLLFSSN-ESLKFEQAMKDYEKLQYLICQNNLQY----KKSDRIIPSDI 664
Query: 274 TPRIKCLHI 282
P + HI
Sbjct: 665 NPICREEHI 673
>gi|189203315|ref|XP_001937993.1| helicase C-terminal domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985092|gb|EDU50580.1| helicase C-terminal domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1053
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 117/210 (55%), Gaps = 16/210 (7%)
Query: 18 NRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDL-QNL 76
NR L + F + S++ ++ L +G+ FY + E E K L +
Sbjct: 408 NRGLQSTVHTIFAILASISHGMDLLKFHGMGPFYVKMKEFQDEATKTKSKYKKQILDSDA 467
Query: 77 LQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGET--------TKVIIFAN 128
++L +L I + H K L++++ HF ++A G T++++FA+
Sbjct: 468 WKKLMVRLQGWITDDNFV-GHPKLEYLQQVILDHF-MNAGDGRNVDGAPPSQTRIMVFAH 525
Query: 129 YRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATS 183
+R EI +LK EPM++ +FVGQ S G+TQ++Q E ++KF+ GEFNTLIATS
Sbjct: 526 FRDSAEEIARILKRHEPMIRPRIFVGQAHGKNSEGMTQKDQLEAVEKFKNGEFNTLIATS 585
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
+GEEGLDIGE+DL+IC+D++ SPI+ +
Sbjct: 586 IGEEGLDIGEVDLIICYDSKASPIRAYSKW 615
>gi|240103224|ref|YP_002959533.1| Hef nuclease [Thermococcus gammatolerans EJ3]
gi|239910778|gb|ACS33669.1| Hef, Helicase-associated endonuclease for fork-structured DNA (Hef)
[Thermococcus gammatolerans EJ3]
Length = 801
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 128/224 (57%), Gaps = 20/224 (8%)
Query: 35 LASALENLVTYGLRSFYNNLVEVSKEDG-SCPILGKDNDLQNLLQQLKPKLDINIMSSEY 93
L A+E L T GL + N L ++ ++ S L +D ++ ++ L + + E
Sbjct: 283 LHHAIELLETQGLTALRNYLKKLREDRSKSSRELMEDPRMRKVIYLL-------VQAKEL 335
Query: 94 AWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFV 153
H K +L+++++ E+ +K+I+F NYR +I + L+ L V A F+
Sbjct: 336 GLDHPKMEKLKDLIKKQL----ERKPDSKIIVFTNYRDTGKKIVEELRNL--GVSAERFI 389
Query: 154 GQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
GQ+S G++Q+EQKE++ +F GEFN L+ATSVGEEGLD+ E+DLV+ ++ S I+
Sbjct: 390 GQASRGTDRGMSQKEQKEVLDRFSRGEFNVLVATSVGEEGLDVPEVDLVVFYEPVPSAIR 449
Query: 209 MVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKI 251
+QR GRTGR R G+ VIL+ +G R+ + +S + K + I
Sbjct: 450 SIQRRGRTGRHRPGKVVILMAKGTRDEAYYWSSRRKEKGMFDAI 493
>gi|389851479|ref|YP_006353713.1| Hef nuclease [Pyrococcus sp. ST04]
gi|388248785|gb|AFK21638.1| Hef nuclease [Pyrococcus sp. ST04]
Length = 758
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 159/315 (50%), Gaps = 62/315 (19%)
Query: 18 NRDLDRMIQRDFH-VTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNL 76
N DL +++ FH + L A+E L T GL + L ++ +E S G + L
Sbjct: 266 NHDLRKLLL--FHAMALKLHHAIELLETQGLSALRVYLKKLYEEAKS----GSTKASKEL 319
Query: 77 L--QQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVA 134
+++K + + + + E H K +L+++++ + K ++K+I+F NYR
Sbjct: 320 FADKRMKKAISLLVQAREIGLDHPKLDKLKDLIKDQLK----KKPSSKIIVFTNYRETSK 375
Query: 135 EIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
+I + L +K+ FVGQ++ G++Q+EQK ++ +F GEFN L+ATSVGEEGL
Sbjct: 376 KIVEELS--REGIKSKRFVGQATKENDKGMSQREQKLVLDEFSRGEFNVLVATSVGEEGL 433
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGR--EAHNF---------- 237
D+ E+DLV+ ++ S I+ +QR GRTGR R GR VIL+ +G EA+ +
Sbjct: 434 DVPEVDLVVFYEPVPSAIRSIQRRGRTGRHRPGRVVILMAKGTRDEAYYWSSRQKEKVMQ 493
Query: 238 --------------QTSMQ----------TCKSYVEKIINNKSIYANLAKNGPRMIP--- 270
QTS++ T ++++EK KSI + K G R++
Sbjct: 494 ETIRKVSQMVKKQRQTSLESFVKKQEEKRTLEAWLEKRSEEKSITEKIEKRGVRIVVDTR 553
Query: 271 ---AHVTPRIKCLHI 282
+ V R+K L +
Sbjct: 554 ELRSEVVKRLKMLGV 568
>gi|212224218|ref|YP_002307454.1| Hef nuclease [Thermococcus onnurineus NA1]
gi|212009175|gb|ACJ16557.1| helicase-associated endonuclease for fork-structured DNA
[Thermococcus onnurineus NA1]
Length = 789
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 128/226 (56%), Gaps = 23/226 (10%)
Query: 35 LASALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L A+E L T GL R++ L E K S L +D ++ ++ L + +
Sbjct: 282 LQHAIELLETQGLTALRAYLKKLRE-DKRTKSSRELMEDPRMRKVIYLL-------VQAK 333
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
E H K +L+E++++ EK +K+I+F NYR +I + L+ + V A
Sbjct: 334 ELGIDHPKMEKLKELVKAQL----EKKPNSKIIVFTNYRDTGKKIVEELRAMS--VSAER 387
Query: 152 FVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
F+GQ+S G++Q++QKE +++F GEF+ L+ATSVGEEGLD+ E+DLVI ++ S
Sbjct: 388 FIGQASRSNDRGMSQKQQKETLERFSRGEFSVLVATSVGEEGLDVPEVDLVIFYEPVPSA 447
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKI 251
I+ +QR GRTGR R GR VIL+ +G R+ + +S + + E I
Sbjct: 448 IRSIQRRGRTGRHRPGRVVILMAKGTRDEAYYWSSRRKERGMFEAI 493
>gi|397652338|ref|YP_006492919.1| Hef nuclease [Pyrococcus furiosus COM1]
gi|393189929|gb|AFN04627.1| Hef nuclease [Pyrococcus furiosus COM1]
Length = 763
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 136/247 (55%), Gaps = 29/247 (11%)
Query: 18 NRDLDRMIQRDFHVTHSLA----SALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKD 70
N DL R + H++A A+E L T GL R++ L E +K +
Sbjct: 266 NHDL-----RGLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIF 320
Query: 71 NDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYR 130
+D +++K + + + + E H K +L+EI+ R ++ + +K+I+F NYR
Sbjct: 321 SD-----KRMKKAISLLVQAKEIGLDHPKMDKLKEII----REQLQRKQNSKIIVFTNYR 371
Query: 131 VVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVG 185
+I + L ++ +KA FVGQ+S G++Q+EQK I+ +F GEFN L+ATSVG
Sbjct: 372 ETAKKIVNEL--VKDGIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFNVLVATSVG 429
Query: 186 EEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTC 244
EEGLD+ E+DLV+ ++ S I+ +QR GRTGR GR +IL+ +G R+ + +S Q
Sbjct: 430 EEGLDVPEVDLVVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKGTRDEAYYWSSRQKE 489
Query: 245 KSYVEKI 251
K E I
Sbjct: 490 KIMQETI 496
>gi|18978387|ref|NP_579744.1| Hef nuclease [Pyrococcus furiosus DSM 3638]
gi|18894225|gb|AAL82139.1| ATP-dependent RNA helicase, putative [Pyrococcus furiosus DSM 3638]
Length = 764
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 136/247 (55%), Gaps = 29/247 (11%)
Query: 18 NRDLDRMIQRDFHVTHSLA----SALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKD 70
N DL R + H++A A+E L T GL R++ L E +K +
Sbjct: 267 NHDL-----RGLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIF 321
Query: 71 NDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYR 130
+D +++K + + + + E H K +L+EI+ R ++ + +K+I+F NYR
Sbjct: 322 SD-----KRMKKAISLLVQAKEIGLDHPKMDKLKEII----REQLQRKQNSKIIVFTNYR 372
Query: 131 VVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVG 185
+I + L ++ +KA FVGQ+S G++Q+EQK I+ +F GEFN L+ATSVG
Sbjct: 373 ETAKKIVNEL--VKDGIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFNVLVATSVG 430
Query: 186 EEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTC 244
EEGLD+ E+DLV+ ++ S I+ +QR GRTGR GR +IL+ +G R+ + +S Q
Sbjct: 431 EEGLDVPEVDLVVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKGTRDEAYYWSSRQKE 490
Query: 245 KSYVEKI 251
K E I
Sbjct: 491 KIMQETI 497
>gi|255716972|ref|XP_002554767.1| KLTH0F13310p [Lachancea thermotolerans]
gi|238936150|emb|CAR24330.1| KLTH0F13310p [Lachancea thermotolerans CBS 6340]
Length = 1028
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 88/122 (72%), Gaps = 5/122 (4%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q++QKE+++KF+ G +N L+ TS+GEEGLDIGE+DL+IC+DA SPIK +QR+
Sbjct: 544 AQVSGMNQKQQKEVLRKFKDGTYNILVCTSIGEEGLDIGEVDLIICYDATSSPIKNIQRM 603
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ V+LL+ G E+ F +M+ S +++I++ ++ + R+IP +
Sbjct: 604 GRTGRKRDGKIVLLLS-GNESKKFAQAMED-YSELQRIVSRDTLE---YRQSDRIIPKEI 658
Query: 274 TP 275
P
Sbjct: 659 EP 660
>gi|190344782|gb|EDK36533.2| hypothetical protein PGUG_00631 [Meyerozyma guilliermondii ATCC
6260]
Length = 413
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 87/120 (72%), Gaps = 4/120 (3%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
++Q+ QKEI+KKFR+G+ N L+ATS+GEEGLDIGE+DL++C+D+ SPIK +QR+GRTGR
Sbjct: 1 MSQKVQKEIVKKFRSGDINVLVATSIGEEGLDIGEVDLIVCYDSTSSPIKNIQRMGRTGR 60
Query: 219 KRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIK 278
KR+G+ V+LL G E F +M + Y++K I + + L +N R+IP TP ++
Sbjct: 61 KRDGK-VLLLFSGNEESKFDKAMGGYE-YIQKHIMAGKMISLLPRN--RIIPQSFTPIVE 116
>gi|60593908|pdb|1WP9|A Chain A, Crystal Structure Of Pyrococcus Furiosus Hef Helicase
Domain
gi|60593909|pdb|1WP9|B Chain B, Crystal Structure Of Pyrococcus Furiosus Hef Helicase
Domain
gi|60593910|pdb|1WP9|C Chain C, Crystal Structure Of Pyrococcus Furiosus Hef Helicase
Domain
gi|60593911|pdb|1WP9|D Chain D, Crystal Structure Of Pyrococcus Furiosus Hef Helicase
Domain
gi|60593912|pdb|1WP9|E Chain E, Crystal Structure Of Pyrococcus Furiosus Hef Helicase
Domain
gi|60593913|pdb|1WP9|F Chain F, Crystal Structure Of Pyrococcus Furiosus Hef Helicase
Domain
Length = 494
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 133/238 (55%), Gaps = 29/238 (12%)
Query: 18 NRDLDRMIQRDFHVTHSLA----SALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKD 70
N DL R + H++A A+E L T GL R++ L E +K +
Sbjct: 266 NHDL-----RGLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIF 320
Query: 71 NDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYR 130
+D +++K + + + + E H K +L+EI+ R ++ + +K+I+F NYR
Sbjct: 321 SD-----KRMKKAISLLVQAKEIGLDHPKMDKLKEII----REQLQRKQNSKIIVFTNYR 371
Query: 131 VVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVG 185
+I + L ++ +KA FVGQ+S G++Q+EQK I+ +F GEFN L+ATSVG
Sbjct: 372 ETAKKIVNEL--VKDGIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFNVLVATSVG 429
Query: 186 EEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQ 242
EEGLD+ E+DLV+ ++ S I+ +QR GRTGR GR +IL+ +G R+ + +S Q
Sbjct: 430 EEGLDVPEVDLVVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKGTRDEAYYWSSRQ 487
>gi|357616345|gb|EHJ70142.1| hypothetical protein KGM_06170 [Danaus plexippus]
Length = 1703
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 141/301 (46%), Gaps = 53/301 (17%)
Query: 25 IQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKL 84
I R F + +L LE LV +G R F N E ++ + +DN+L +L+ KL
Sbjct: 350 IMRIFTLLITLYHGLELLVKHGSRVFLNFFDEHPEK----TWVHEDNELTAFFDKLRDKL 405
Query: 85 DINIMS---------------SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANY 129
+N + S + H KF +L+EI+ HF KG+ TK I+F Y
Sbjct: 406 GLNPLDLDRSVLPDGTVPEVPSNLNFGHPKFSKLKEIIMRHFDTAKNKGQVTKAIVFCEY 465
Query: 130 RVVVAEIFDVLKPLEPMVKASMFVGQ-SSG------VTQQEQKEIMKKFRAGEFNTLIAT 182
R V ++ +L P + MFVG +SG ++Q++Q +M+ FR+G NTL+ +
Sbjct: 466 RESVNLVYCLLLQCRPTIVPEMFVGHGASGKDGKTVISQKQQLRVMRNFRSGVCNTLVCS 525
Query: 183 SVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQ 242
S C +P R GRTGR+R+G+ IL+T+GRE ++
Sbjct: 526 SP--------------CNAMDPAP----ARCGRTGRERSGQVFILVTEGREHSTLLDCIR 567
Query: 243 TCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENE 302
+KI+ ++ + +L K+ PRMIPA P + + I V +KK+ KE
Sbjct: 568 QNDGLNQKILTSEEVKKSLFKSNPRMIPADFMPECQKMFITV---------AKKESKETS 618
Query: 303 K 303
K
Sbjct: 619 K 619
>gi|224012569|ref|XP_002294937.1| rna-helicase-like protein [Thalassiosira pseudonana CCMP1335]
gi|220969376|gb|EED87717.1| rna-helicase-like protein [Thalassiosira pseudonana CCMP1335]
Length = 197
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 100/163 (61%), Gaps = 14/163 (8%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPL-EPMVKASMFVGQS------------SGVTQQEQK 165
E+T+VI+F+ +R V I +L + +K S F+GQS +G+ Q +Q+
Sbjct: 33 ESTRVIVFSQWRDSVEGIVAMLSSQHQSFLKPSQFIGQSKKSAGTKGKKAKAGMNQAQQQ 92
Query: 166 EIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV 225
+++++F G FN L+ T V EEGLDI E+DL++ FD KSPI+ +QR GRTGRKRNGR +
Sbjct: 93 KVLEQFSKGIFNILVCTCVAEEGLDISEVDLIVNFDILKSPIRNIQRSGRTGRKRNGRVI 152
Query: 226 ILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRM 268
L+++G+E +++ S+ K + +N++++ N P M
Sbjct: 153 FLVSEGQEERSYRESVTNTKKIARALQSNRNVF-KFCPNNPMM 194
>gi|406607066|emb|CCH41581.1| fanconi anemia group M protein [Wickerhamomyces ciferrii]
Length = 1307
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 113/199 (56%), Gaps = 25/199 (12%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q G+ Q+ QKE++KKF+ G+FN L+ATS+GEEGLDIGE+DL+IC+D+ SPIK +QR+
Sbjct: 544 AQLQGMNQKTQKELIKKFKNGDFNVLVATSIGEEGLDIGEVDLIICYDSTSSPIKNIQRM 603
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRK NG+ ++LL E F +M+ ++V+K I + + + R+IP +
Sbjct: 604 GRTGRKNNGKVILLLASNEELK-FDQAMEGY-AFVQKQIAQDCLDTHKSD---RIIPKEI 658
Query: 274 TPRIKCLHIVV--------------KDRV----TPAKPSKKKPKENEKANKKSKKKLETD 315
PR CL ++ +D V T A K + AN KS K+ +
Sbjct: 659 QPR--CLKKLIEVPEENLAIAKGEDEDEVIKYATQAMLGKNVKGKKSSANSKSAKQGKLP 716
Query: 316 GNSEPAGKQNKTNAKKTKK 334
G + A K+ + AK+ K+
Sbjct: 717 GLGKAAQKKKEAEAKRPKR 735
>gi|294656897|ref|XP_002770326.1| DEHA2D16896p [Debaryomyces hansenii CBS767]
gi|218511696|sp|Q6BRF0.2|MPH1_DEBHA RecName: Full=ATP-dependent DNA helicase MPH1
gi|199431824|emb|CAR65680.1| DEHA2D16896p [Debaryomyces hansenii CBS767]
Length = 1105
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 151/323 (46%), Gaps = 70/323 (21%)
Query: 29 FHVTHSLASALENLVTYGLRSFYNNLVEVSKE-----------DGSCPILGKDNDLQNLL 77
+ + + AL L YG++SFYN + KE + + ++++ +L
Sbjct: 354 LQILNVVGQALRRLNIYGIKSFYNYFDQKHKEFTIKFKNKKSNNQTAARFYFHDNIKLIL 413
Query: 78 QQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIF 137
+ K +++ + H K L L+ F+ + ++VIIF +R +I
Sbjct: 414 DKCK-----ELIADDNFLGHPKLEILINELDEFFK--ENEANDSRVIIFTEFRESALDIV 466
Query: 138 DVLKPLEPMVKASMFVGQSS---------------------------------------- 157
++ + ++ +F+GQS
Sbjct: 467 SSIERIGSNLRPHIFIGQSKEKEKFDEEAYLSKGKKGRTKGKATKGKQNSETPERSTSRT 526
Query: 158 --------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
G+ Q+ QK+++KKF+ GE+N L+ATS+GEEGLDIGE+DL++C+D+ SPIK
Sbjct: 527 SSEDAQIKGMNQKLQKDLIKKFKKGEYNILVATSIGEEGLDIGEVDLIVCYDSTSSPIKN 586
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
+QR+GRTGRKR+G+ V+LL G E F +M + + I+N + I LA++ R+I
Sbjct: 587 IQRMGRTGRKRDGK-VLLLFAGNEESKFDKAMAGYEFIQQHIMNGRLI--TLAQSN-RII 642
Query: 270 PAHVTPRIKCLHIVVKDRVTPAK 292
P P ++ I + + T K
Sbjct: 643 PKSYKPIVEKKFIEIPEENTEIK 665
>gi|223477217|ref|YP_002581470.1| ATP-dependent RNA helicase [Thermococcus sp. AM4]
gi|214032443|gb|EEB73273.1| ATP-dependent RNA helicase [Thermococcus sp. AM4]
Length = 807
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 126/226 (55%), Gaps = 24/226 (10%)
Query: 35 LASALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L A+E L T GL RS+ L E + G L +D ++ + L + +
Sbjct: 297 LHHAIELLETQGLTALRSYLKKLREDRSKSGRE--LMEDPRMRKVTYLL-------VQAK 347
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
E H K +L+E++ R +K +K+I+F NYR +I + L+ E + A
Sbjct: 348 ELGLDHPKMEKLKELI----RKQLQKKPDSKIIVFTNYRDTGKKIVEELQ--EMGISAER 401
Query: 152 FVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
F+GQ+S G++Q+EQKE++ +F GEFN L+ATSVGEEGLD+ E+DLV+ ++ S
Sbjct: 402 FIGQASRGRDRGMSQREQKEVLDRFSRGEFNVLVATSVGEEGLDVPEVDLVVFYEPVPSA 461
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKI 251
I+ +QR GRTGR R G+ VIL+ +G R+ + +S + K E I
Sbjct: 462 IRSIQRRGRTGRHRPGKVVILMAKGTRDEAYYWSSRRKEKGMFEAI 507
>gi|8778360|gb|AAF79368.1|AC007887_27 F15O4.40 [Arabidopsis thaliana]
Length = 1587
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 138/270 (51%), Gaps = 50/270 (18%)
Query: 1 MLAKDKYVKSK-AQFPHINRDLDRMIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSK 59
++A+DK+ ++ PH+N ++ F +L + L ++G+R Y L E K
Sbjct: 464 LMARDKFRQAPLPGLPHVNHG---DVESCFAALITLYHIRKLLSSHGIRPAYEMLEEKLK 520
Query: 60 EDGSCPILGKDNDLQ--NLLQQLK-------PKLD--INIMSSEYA-----------WSH 97
E ++ K+ D++ LL Q + PKL + I+ +
Sbjct: 521 EGPFARLMSKNEDIRMTKLLMQQRLSHGAPSPKLSKMLEILVDHFIDVSTQLVLQLNIDM 580
Query: 98 LKFIRLR----EILESHFRLHAEKGETTKVIIF-------ANYRVV--------VAEIFD 138
+ F R E + H+ L ++ +I+ ++Y V +I +
Sbjct: 581 ILFYGCRSERSEDITGHYFLKFQRKRKVSIIVVCFPLFSCSSYFFVSIHPITLLFRDIMN 640
Query: 139 VLKPLEPMVKASMFVGQSSGVT-----QQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGE 193
L + MVKA+ F+GQSSG T Q+ Q+ +++KFRAG FN ++ATS+GEEGLDI E
Sbjct: 641 ALSNIGDMVKATEFIGQSSGKTLKGQSQKIQQAVLEKFRAGGFNVIVATSIGEEGLDIME 700
Query: 194 IDLVICFDAQKSPIKMVQRLGRTGRKRNGR 223
+DLVICFDA SP++M+QR+GRTGRK NGR
Sbjct: 701 VDLVICFDANVSPLRMIQRMGRTGRKNNGR 730
>gi|167538349|ref|XP_001750839.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770660|gb|EDQ84343.1| predicted protein [Monosiga brevicollis MX1]
Length = 1758
Score = 119 bits (297), Expect = 3e-24, Method: Composition-based stats.
Identities = 68/182 (37%), Positives = 108/182 (59%), Gaps = 9/182 (4%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K ++LR+IL SHF A T+ ++F+ R V +I DVL +++A F+GQ
Sbjct: 519 HPKLVKLRDILHSHFT--AMGATATRAMVFSTIRDSVQDITDVLNRHGNLIRAVPFIGQG 576
Query: 157 SGVTQ------QEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
G +EQ ++++F+ G++N L+AT V EEGLDIG++DL++C+D Q S ++V
Sbjct: 577 KGTGTGKGLTQKEQARVLQQFKNGQYNVLVATCVAEEGLDIGDVDLIVCYDQQGSQTRLV 636
Query: 211 QRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIP 270
QR GRTGRKR+G+ V L+T E ++ S K+++ K I S ++ P ++P
Sbjct: 637 QRSGRTGRKRDGKIVFLMTANVEESLYKRSADG-KNHIFKAIVKGSNSFKMSNLSPALLP 695
Query: 271 AH 272
A
Sbjct: 696 AQ 697
>gi|344228143|gb|EGV60029.1| P-loop containing nucleoside triphosphate hydrolase protein
[Candida tenuis ATCC 10573]
Length = 1038
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 174/361 (48%), Gaps = 68/361 (18%)
Query: 36 ASALENLVTYGLRSF--YNNLVEVSKEDGSCPILGKDNDLQNLLQQLKP--KLDINIMSS 91
A+ ++ L YG +F Y N D +L N + L P +L + +
Sbjct: 408 ANCIKKLKIYGFNNFKAYFN-------DTRTKVLASKNKMMLELFSSAPVKELVGYLSKT 460
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKAS 150
+ + H K L E + + F+ + + +KVIIF+ R EI ++ + P +K
Sbjct: 461 QVQFGHPKIEILIEYINNFFK--TSEYDNSKVIIFSELRDSALEIVSTIEAMNNPRLKPH 518
Query: 151 MFVGQSS-------------------------GVTQQEQKEIMKKFRAGEFNTLIATSVG 185
+F+GQ+ G+ Q+ QK+++K F+ ++N L+ATS+G
Sbjct: 519 IFIGQAPDSNPEVVDKQNGGPKRSSSEDAKLKGMNQKVQKQLIKDFKTEKYNILVATSIG 578
Query: 186 EEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCK 245
EEGLDIGE+DL++C+D SPIK VQRLGRTGRKR+G ++L + E F +M +
Sbjct: 579 EEGLDIGEVDLIVCYDTSASPIKNVQRLGRTGRKRDGNILMLFSDN-ERSKFDKAMDNYE 637
Query: 246 SYVEKIINNKSIYANLAKNGP--RMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEK 303
+++K I K A L ++ R+IP+ P ++ IV P + + +N++
Sbjct: 638 -WIQKFIVRKE--AELVQDCTRVRIIPSGFRPALEKKFIV---------PEEIEVDDNDE 685
Query: 304 --------ANKKSKKKLETDGNSEPAGKQNKTNAKKTKK----QPMMTQSNDIRTCFENI 351
NKK+K T +S+ A NKT +KK+K + +++ + F N+
Sbjct: 686 IIKIAMSYMNKKTKGGSVTKASSKSAA--NKTKSKKSKGVEKIEKRFFMPDNVESGFRNV 743
Query: 352 T 352
T
Sbjct: 744 T 744
>gi|146422637|ref|XP_001487254.1| hypothetical protein PGUG_00631 [Meyerozyma guilliermondii ATCC
6260]
Length = 413
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 86/120 (71%), Gaps = 4/120 (3%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
++Q+ QKEI+KKFR G+ N L+ATS+GEEGLDIGE+DL++C+D+ SPIK +QR+GRTGR
Sbjct: 1 MSQKVQKEIVKKFRLGDINVLVATSIGEEGLDIGEVDLIVCYDSTSSPIKNIQRMGRTGR 60
Query: 219 KRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIK 278
KR+G+ V+LL G E F +M + Y++K I + + L +N R+IP TP ++
Sbjct: 61 KRDGK-VLLLFSGNEELKFDKAMGGYE-YIQKHIMAGKMISLLPRN--RIIPQSFTPIVE 116
>gi|341583122|ref|YP_004763614.1| Hef nuclease [Thermococcus sp. 4557]
gi|340810780|gb|AEK73937.1| Hef nuclease [Thermococcus sp. 4557]
Length = 778
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 132/242 (54%), Gaps = 26/242 (10%)
Query: 35 LASALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L A+E L T GL R++ L E K S L +D ++ ++ L + +
Sbjct: 282 LQHAIELLETQGLTALRTYLKKLRE-DKRAKSSKQLMEDPRMRKVVYLL-------VQAK 333
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
E H K RL+E+++ E+ +KVI+F NYR I + L+ + + A
Sbjct: 334 ESGVDHPKMERLKELVKRQL----ERKPDSKVIVFTNYRDTGRRIVEELEAM--GIAAER 387
Query: 152 FVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
F+GQ+S G++Q++QKE++ +F EFN L+ATSVGEEGLD+ E+DLV+ ++ S
Sbjct: 388 FIGQASRGKDKGMSQKKQKEVLDRFSRAEFNVLVATSVGEEGLDVPEVDLVVFYEPVPSA 447
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANLAKNG 265
I+ +QR GRTGR R G+ VIL+ +G R+ + +S + K + I ++I L +
Sbjct: 448 IRSIQRRGRTGRHRQGKVVILMARGTRDEAYYWSSKRKEKGMFDAI---RAIARELERAR 504
Query: 266 PR 267
PR
Sbjct: 505 PR 506
>gi|367004855|ref|XP_003687160.1| hypothetical protein TPHA_0I02220 [Tetrapisispora phaffii CBS 4417]
gi|357525463|emb|CCE64726.1| hypothetical protein TPHA_0I02220 [Tetrapisispora phaffii CBS 4417]
Length = 1038
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 83/122 (68%), Gaps = 5/122 (4%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q G+TQ++QKE++ F+ G +N L+ TS+GEEGLDIGE+DL+ICFD SPIK +QR+
Sbjct: 546 AQLKGMTQKQQKEVISDFKKGIYNVLVCTSIGEEGLDIGEVDLIICFDTTSSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ ++LL E+ F+ +M++ ++I N +Y K+ R++P +
Sbjct: 606 GRTGRKRDGK-IVLLFASNESKKFEKAMESYYDLQKQIGQNFVLY----KDSDRILPKDI 660
Query: 274 TP 275
P
Sbjct: 661 EP 662
>gi|302307440|ref|NP_984107.2| ADR011Cp [Ashbya gossypii ATCC 10895]
gi|442570227|sp|Q75AA7.2|MPH1_ASHGO RecName: Full=ATP-dependent DNA helicase MPH1
gi|299789002|gb|AAS51931.2| ADR011Cp [Ashbya gossypii ATCC 10895]
gi|374107323|gb|AEY96231.1| FADR011Cp [Ashbya gossypii FDAG1]
Length = 1077
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 92/134 (68%), Gaps = 5/134 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+TQ++QKE++ F+ G++N L+ TS+GEEGLDIGE+D++IC+D SPIK +QR+
Sbjct: 551 AQISGMTQKQQKEVISLFKKGDYNVLVCTSIGEEGLDIGEVDMIICYDTTSSPIKNIQRM 610
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+GR V+LL+ E F+ +M+ + ++++I +S+ + R+IP +
Sbjct: 611 GRTGRKRDGRIVLLLSDN-EPRKFEQAMEDY-AQLQRLIGEESLNYKVTD---RIIPKGI 665
Query: 274 TPRIKCLHIVVKDR 287
P+ + I + ++
Sbjct: 666 NPQCQKEFITISEK 679
>gi|302310612|ref|XP_453667.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199425049|emb|CAH00763.2| KLLA0D13552p [Kluyveromyces lactis]
Length = 1008
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q++QK+++ F+ G +N L+ TS+GEEGLDIGE+DL+ICFD+ SPIK +QR+
Sbjct: 566 AQLSGMNQKQQKKVISDFKKGIYNVLVCTSIGEEGLDIGEVDLIICFDSTSSPIKNIQRM 625
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+GR V+L + G E F+ +M ++ I +N Y R++P +V
Sbjct: 626 GRTGRKRDGRIVLLFS-GNEKFKFEQAMNDYENLQTAITHNALEYT----KSDRILPPNV 680
Query: 274 TPRIKCLHIVVKD 286
P+ + I++ +
Sbjct: 681 QPKCEEKFIIISN 693
>gi|189082533|sp|Q6CQX2.2|MPH1_KLULA RecName: Full=ATP-dependent DNA helicase MPH1
Length = 1002
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q++QK+++ F+ G +N L+ TS+GEEGLDIGE+DL+ICFD+ SPIK +QR+
Sbjct: 560 AQLSGMNQKQQKKVISDFKKGIYNVLVCTSIGEEGLDIGEVDLIICFDSTSSPIKNIQRM 619
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+GR V+L + G E F+ +M ++ I +N Y R++P +V
Sbjct: 620 GRTGRKRDGRIVLLFS-GNEKFKFEQAMNDYENLQTAITHNALEYT----KSDRILPPNV 674
Query: 274 TPRIKCLHIVVKD 286
P+ + I++ +
Sbjct: 675 QPKCEEKFIIISN 687
>gi|6322192|ref|NP_012267.1| Mph1p [Saccharomyces cerevisiae S288c]
gi|731905|sp|P40562.1|MPH1_YEAST RecName: Full=ATP-dependent DNA helicase MPH1; AltName:
Full=Mutator phenotype protein 1
gi|557851|emb|CAA86204.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190406221|gb|EDV09488.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|259147261|emb|CAY80514.1| Mph1p [Saccharomyces cerevisiae EC1118]
gi|285812649|tpg|DAA08548.1| TPA: Mph1p [Saccharomyces cerevisiae S288c]
gi|346228213|gb|AEO21090.1| MPH1 [synthetic construct]
gi|392298724|gb|EIW09820.1| Mph1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 993
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q+ QKE++ F+ GE+N L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 546 AQISGMNQKMQKEVIHNFKKGEYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ ++LL E++ F+ +M+ S ++ +I+ + I K R+IP +
Sbjct: 606 GRTGRKRDGK-IVLLFSSNESYKFERAMED-YSTLQALISKQCID---YKKSDRIIPEDI 660
Query: 274 TPRIKCLHIVVKD 286
P I + D
Sbjct: 661 IPECHETLITIND 673
>gi|349578953|dbj|GAA24117.1| K7_Mph1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 993
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q+ QKE++ F+ GE+N L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 546 AQISGMNQKMQKEVIHNFKKGEYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ ++LL E++ F+ +M+ S ++ +I+ + I K R+IP +
Sbjct: 606 GRTGRKRDGK-IVLLFSSNESYKFERAMED-YSTLQALISKQCID---YKKSDRIIPEDI 660
Query: 274 TPRIKCLHIVVKD 286
P I + D
Sbjct: 661 IPECHETLITIND 673
>gi|256274143|gb|EEU09053.1| Mph1p [Saccharomyces cerevisiae JAY291]
Length = 993
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q+ QKE++ F+ GE+N L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 546 AQISGMNQKMQKEVIHNFKKGEYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ ++LL E++ F+ +M+ S ++ +I+ + I K R+IP +
Sbjct: 606 GRTGRKRDGK-IVLLFSSNESYKFERAMED-YSTLQALISKQCID---YKKSDRIIPEDI 660
Query: 274 TPRIKCLHIVVKD 286
P I + D
Sbjct: 661 IPECHETLITIND 673
>gi|207344252|gb|EDZ71457.1| YIR002Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 993
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q+ QKE++ F+ GE+N L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 546 AQISGMNQKMQKEVIHNFKKGEYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ ++LL E++ F+ +M+ S ++ +I+ + I K R+IP +
Sbjct: 606 GRTGRKRDGK-IVLLFSSNESYKFERAMED-YSTLQALISKQCID---YKKSDRIIPEDI 660
Query: 274 TPRIKCLHIVVKD 286
P I + D
Sbjct: 661 IPECHETLITIND 673
>gi|189082208|sp|A6ZVS0.1|MPH1_YEAS7 RecName: Full=ATP-dependent DNA helicase MPH1; AltName:
Full=Mutator phenotype protein 1
gi|151943160|gb|EDN61495.1| DEAH family protein [Saccharomyces cerevisiae YJM789]
Length = 993
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q+ QKE++ F+ GE+N L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 546 AQISGMNQKMQKEVIHNFKKGEYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ ++LL E++ F+ +M+ S ++ +I+ + I K R+IP +
Sbjct: 606 GRTGRKRDGK-IVLLFSSNESYKFERAMED-YSTLQALISKQCID---YKKSDRIIPEDI 660
Query: 274 TPRIKCLHIVVKD 286
P I + D
Sbjct: 661 IPECHETLITIND 673
>gi|323455297|gb|EGB11166.1| hypothetical protein AURANDRAFT_52597, partial [Aureococcus
anophagefferens]
Length = 550
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 102/181 (56%), Gaps = 9/181 (4%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ--S 156
K +LRE+L HF E G +++ ++F R V I D L EP ++ FVGQ +
Sbjct: 372 KTAKLRELLVDHFARSREAGRSSRAMVFTGTRHSVDAIGDALAG-EPGLRVQRFVGQGGA 430
Query: 157 SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
SG+ Q +QK +K+F A + N L+AT + EEGLDIG +D+ + +D SPI++VQR+GRT
Sbjct: 431 SGMKQDDQKAAVKRFLADDTNVLVATCIAEEGLDIGAVDMCVFYDQVGSPIRLVQRMGRT 490
Query: 217 GRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKI--INNKSIYANLAKNGPRMIPAHVT 274
RKR GR V+L+ G E F+ + + + ++ NL K RM+P +
Sbjct: 491 ARKRAGRVVLLMGPG-EDRKFEAGGEKSARVNAALRDLRGLRLHQNLNK---RMVPRRLV 546
Query: 275 P 275
P
Sbjct: 547 P 547
>gi|323333071|gb|EGA74472.1| Mph1p [Saccharomyces cerevisiae AWRI796]
Length = 957
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q+ QKE++ F+ GE+N L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 546 AQISGMNQKMQKEVIHNFKKGEYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ ++LL E++ F+ +M+ S ++ +I+ + I K R+IP +
Sbjct: 606 GRTGRKRDGK-IVLLFSSNESYKFERAMED-YSTLQALISKQCID---YKKSDRIIPEDI 660
Query: 274 TPRIKCLHIVVKD 286
P I + D
Sbjct: 661 IPECHETLITIND 673
>gi|170064010|ref|XP_001867348.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167881455|gb|EDS44838.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1122
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 15/196 (7%)
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
V+Q+EQ M+ FR+G NTL+AT V EEG+D+GE+DL++CFD K+P + VQR+GRTG
Sbjct: 14 AVSQKEQIATMRDFRSGLCNTLVATCVAEEGIDVGEVDLIVCFDIVKNPTRFVQRIGRTG 73
Query: 218 RKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
R+ GR ++L+T+G+E + + + + ++ I L + PR++P PR
Sbjct: 74 RQAVGRVLMLVTEGKEHETLKEVLASKDKTNRALSKSREILNVLYRGSPRLVPTEFAPR- 132
Query: 278 KCLHIVVKDRVTPAKPSKKKPKENE-----KANKKSKKKLETDGNSEPAGKQNKTNAKKT 332
C+ ++ P K++ E E K + +K+ E G S A + K K
Sbjct: 133 -CVQTFIR------IPEKEERGEVEGGKRGKRGRPAKEDRENAGESSTAETRGKRKKKGE 185
Query: 333 KKQPMMTQSNDIRTCF 348
+ P TQ D+R F
Sbjct: 186 EVAPRGTQ--DVRKFF 199
>gi|284161344|ref|YP_003399967.1| DEAD/DEAH box helicase [Archaeoglobus profundus DSM 5631]
gi|284011341|gb|ADB57294.1| DEAD/DEAH box helicase domain protein [Archaeoglobus profundus DSM
5631]
Length = 736
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 108/162 (66%), Gaps = 14/162 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM-VKASMFVGQ 155
H K +L+EI+ S + EK E+ ++I+F N+R AE+ + L+ M V A FVGQ
Sbjct: 344 HPKLEKLKEIVSSQLK---EKPES-RIIVFTNFRDT-AEVIS--RELQSMGVPAVRFVGQ 396
Query: 156 SS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
++ G+ Q+EQ EI+++FRAG+ L+ATSVGEEGLDI E+DLV+ ++A S I+ +
Sbjct: 397 ANRENDRGLRQREQVEIVERFRAGDIKVLVATSVGEEGLDIPEVDLVVFYEAIPSEIRSI 456
Query: 211 QRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKI 251
QR GRTGRK+ GR V+L+T+G R+ F S++ ++ E++
Sbjct: 457 QRKGRTGRKKEGRIVVLVTKGTRDEAYFYISLRKERAMFERL 498
>gi|116753548|ref|YP_842666.1| Hef nuclease [Methanosaeta thermophila PT]
gi|116664999|gb|ABK14026.1| DEAD/DEAH box helicase domain protein [Methanosaeta thermophila PT]
Length = 749
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 23/195 (11%)
Query: 46 GLRSFYNNLVEVSKEDGSCPI---LGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIR 102
LR + L + ++ G L +D +Q++L LK DI++ H K R
Sbjct: 299 ALRQYLERLAQEARSRGGSKASRRLIEDPRIQHVLSVLK---DIDL-------EHPKLSR 348
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKP-LEPMVKASMFVGQSS---- 157
EI+E E +++I+F NYR + L+ VK FVGQ+S
Sbjct: 349 ALEIIEDQL----ETSPESRIIVFTNYRDTATALLRFLQANASDAVKPVRFVGQASREND 404
Query: 158 -GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
G++Q++Q EI++KFRAGE+N LIATSVGEEG+DI D+V+ ++ S I+ +QR GRT
Sbjct: 405 EGLSQRKQSEILEKFRAGEYNVLIATSVGEEGIDIPSTDMVLFYEPVPSEIRSIQRKGRT 464
Query: 217 GRKRNGRCVILLTQG 231
GR R GR V+L+ +G
Sbjct: 465 GRARTGRVVVLIAKG 479
>gi|330508988|ref|YP_004385416.1| DEAD/DEAH box helicase domain-containing protein [Methanosaeta
concilii GP6]
gi|328929796|gb|AEB69598.1| DEAD/DEAH box helicase domain protein [Methanosaeta concilii GP6]
Length = 762
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 91/140 (65%), Gaps = 10/140 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K +R+IL E +++++F NYR + + LK +P +KA FVGQS
Sbjct: 346 HPKPAMVRKILTEQIEAKPE----SRIMVFTNYRDTASALIRFLKE-DPKIKAVRFVGQS 400
Query: 157 S-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G++Q++Q EI+++FRAGE+N LIATSVGEEG+DI D+V+ ++ S I+ +Q
Sbjct: 401 SRADDEGLSQKKQAEILQRFRAGEYNVLIATSVGEEGIDIPATDMVLFYEPVPSEIRSIQ 460
Query: 212 RLGRTGRKRNGRCVILLTQG 231
R GRTGR R+GR V+L+ +G
Sbjct: 461 RKGRTGRARSGRVVVLMARG 480
>gi|401842847|gb|EJT44883.1| MPH1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 992
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q+ QKE++ F+ GE+N L+ TS+GEEGLDIGE+DL++C+D SPIK +QR+
Sbjct: 546 AQISGMNQKMQKEVIHNFKNGEYNVLVCTSIGEEGLDIGEVDLIVCYDTTSSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ ++LL E++ F+ +M+ + +I Y K R++P ++
Sbjct: 606 GRTGRKRDGK-ILLLFSSNESYKFERAMEDYSTLQAQISKQCIDY----KKSDRIVPENI 660
Query: 274 TPRIKCLHIVVKD 286
P + I + D
Sbjct: 661 IPECRETLITIDD 673
>gi|390961773|ref|YP_006425607.1| Hef nuclease [Thermococcus sp. CL1]
gi|390520081|gb|AFL95813.1| Hef nuclease [Thermococcus sp. CL1]
Length = 785
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 154/297 (51%), Gaps = 36/297 (12%)
Query: 35 LASALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L A+E L T GL R++ L E K S L +D ++ ++ L + +
Sbjct: 282 LQHAIELLETQGLTALRAYLKKLRE-DKRTKSSRELMEDPRMRKVIYLL-------VQAK 333
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
E H K +L+E+++ E+ +K+I+F NYR +I + L L + A
Sbjct: 334 EMGMDHPKMEKLKELIKKQL----ERKPNSKIIVFTNYRDTGRKIVEELGGL--GISAER 387
Query: 152 FVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
F+GQ+S G++Q++QKE +++F GEFN L+ATSVGEEGLD+ E+DLV+ ++ S
Sbjct: 388 FIGQASRGKDKGMSQRKQKETLERFSRGEFNVLVATSVGEEGLDVPEVDLVVFYEPVPSA 447
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANL--AK 263
I+ +QR GRTGR R G+ VIL+ +G R+ + +S + + E + + + L A+
Sbjct: 448 IRSIQRRGRTGRHRPGKVVILMAKGTRDEAYYWSSRRKERGMFEAV---RKVAGELERAR 504
Query: 264 NG---PR----MIPAHVTPRIKCLHIVVK-DRVTPAKPSKKKPKENEKANKKSKKKL 312
NG P + RI L +K RV S ++PKE + + +K+L
Sbjct: 505 NGGDKPEGRKGSVEMSARGRITSLDQFLKPKRVERTDKSGREPKEKSEKPAEERKEL 561
>gi|410084042|ref|XP_003959598.1| hypothetical protein KAFR_0K01070 [Kazachstania africana CBS 2517]
gi|372466190|emb|CCF60463.1| hypothetical protein KAFR_0K01070 [Kazachstania africana CBS 2517]
Length = 994
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 89/133 (66%), Gaps = 5/133 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q +G++Q++QKE++++F+ G+FN L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 547 AQINGMSQKQQKEVIQQFKNGDFNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 606
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR G ++LL E++ F+ +M T S ++K+I+ + + K R++P
Sbjct: 607 GRTGRKREGH-ILLLFSSNESYKFEQAM-TDYSNLQKLISQEYVE---CKPSDRILPTDR 661
Query: 274 TPRIKCLHIVVKD 286
P I V +
Sbjct: 662 VPECHKTFIAVNE 674
>gi|50290717|ref|XP_447791.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690855|sp|Q6FPQ3.1|MPH1_CANGA RecName: Full=ATP-dependent DNA helicase MPH1
gi|49527102|emb|CAG60740.1| unnamed protein product [Candida glabrata]
Length = 1052
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q++QKE++KKF++G +N L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 541 AQLSGMNQKQQKEVIKKFKSGLYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 600
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSM 241
GRTGRKR+GR V++ + EA F SM
Sbjct: 601 GRTGRKRDGRIVLMFS-SNEASKFDQSM 627
>gi|444324132|ref|XP_004182706.1| hypothetical protein TBLA_0J01920 [Tetrapisispora blattae CBS 6284]
gi|387515754|emb|CCH63187.1| hypothetical protein TBLA_0J01920 [Tetrapisispora blattae CBS 6284]
Length = 1080
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 84/127 (66%), Gaps = 7/127 (5%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q +G+ Q+ QKE++ +F+ G++N L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 548 AQINGMNQKRQKEVISQFKNGDYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 607
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ +ILL E F+ +M+ S + I N Y K R++P ++
Sbjct: 608 GRTGRKRDGK-IILLFSSNEETKFEKAMEDYASLQKLISQNYLSY----KESDRILPPNI 662
Query: 274 TPRIKCL 280
P +CL
Sbjct: 663 NP--QCL 667
>gi|149237124|ref|XP_001524439.1| hypothetical protein LELG_04411 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451974|gb|EDK46230.1| hypothetical protein LELG_04411 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 433
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 84/124 (67%), Gaps = 4/124 (3%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q+ QKEI+++F+ G++N L+ATS+GEEGLDIGE+DL++C+D+ SPIK +QR+
Sbjct: 58 AQISGMNQKLQKEIIRQFKNGDYNVLVATSIGEEGLDIGEVDLIVCYDSTSSPIKNIQRM 117
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ V+L + E F +M + Y++ I + +N R++P
Sbjct: 118 GRTGRKRDGKVVLLFSSNEEM-KFDKAMAGYQ-YIQNHIMQGDLITLYNQN--RILPQEF 173
Query: 274 TPRI 277
TP +
Sbjct: 174 TPEV 177
>gi|413925496|gb|AFW65428.1| hypothetical protein ZEAMMB73_814845 [Zea mays]
Length = 930
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 103/181 (56%), Gaps = 17/181 (9%)
Query: 136 IFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEID 195
+F+V+ P+V Q G +Q+ Q+ I+KKFR+G +N L+ATS+GEEGLDI E+D
Sbjct: 76 VFEVM--CCPVVLGVHLGNQLKGQSQKTQQAILKKFRSGVYNVLVATSIGEEGLDIIEVD 133
Query: 196 LVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNK 255
LVICFDA SP++M+QR+GRTGRK +G+E ++ C++ + K+++N
Sbjct: 134 LVICFDANVSPLRMIQRMGRTGRK---------NEGQELQGYRKKQGDCRT-MRKLLHNS 183
Query: 256 SIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKKLETD 315
+ A PRM+P P +K + + + + AK + KE A+ K E D
Sbjct: 184 ERFEYHA--SPRMVPHVYKPEVKYVKLTIDKYIPHAKKMRVAAKE---ASPIPWKMSEAD 238
Query: 316 G 316
G
Sbjct: 239 G 239
>gi|254567149|ref|XP_002490685.1| ATP-dependent DNA helicase [Komagataella pastoris GS115]
gi|238030481|emb|CAY68405.1| ATP-dependent DNA helicase [Komagataella pastoris GS115]
gi|328351071|emb|CCA37471.1| fanconi anemia group M protein [Komagataella pastoris CBS 7435]
Length = 1001
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 83/121 (68%), Gaps = 4/121 (3%)
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
G+ Q+ QK+++ KFR E N L+ATS+GEEGLDIGE+D +ICFD SPIK +QR+GRTG
Sbjct: 569 GMNQKAQKDLIDKFRGDELNILVATSIGEEGLDIGEVDFIICFDTTNSPIKNIQRMGRTG 628
Query: 218 RKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
RKR G+ +IL + EA F +M ++++K I++ + N K+ R++P + PR+
Sbjct: 629 RKRTGKVLILCSNNEEA-KFNKAMDNY-AWIQKQISDGDV-INYHKSD-RILPPDLEPRV 684
Query: 278 K 278
+
Sbjct: 685 R 685
>gi|413925497|gb|AFW65429.1| hypothetical protein ZEAMMB73_814845 [Zea mays]
Length = 747
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 103/181 (56%), Gaps = 17/181 (9%)
Query: 136 IFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEID 195
+F+V+ P+V Q G +Q+ Q+ I+KKFR+G +N L+ATS+GEEGLDI E+D
Sbjct: 76 VFEVM--CCPVVLGVHLGNQLKGQSQKTQQAILKKFRSGVYNVLVATSIGEEGLDIIEVD 133
Query: 196 LVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNK 255
LVICFDA SP++M+QR+GRTGRK +G+E ++ C++ + K+++N
Sbjct: 134 LVICFDANVSPLRMIQRMGRTGRK---------NEGQELQGYRKKQGDCRT-MRKLLHNS 183
Query: 256 SIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKKKLETD 315
+ A PRM+P P +K + + + + AK + KE A+ K E D
Sbjct: 184 ERFEYHAS--PRMVPHVYKPEVKYVKLTIDKYIPHAKKMRVAAKE---ASPIPWKMSEAD 238
Query: 316 G 316
G
Sbjct: 239 G 239
>gi|366988979|ref|XP_003674257.1| hypothetical protein NCAS_0A13190 [Naumovozyma castellii CBS 4309]
gi|342300120|emb|CCC67877.1| hypothetical protein NCAS_0A13190 [Naumovozyma castellii CBS 4309]
Length = 1046
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 86/123 (69%), Gaps = 5/123 (4%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q +G+ Q++QKE++K+F+ G +N L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 547 AQINGMNQKQQKEVIKQFKNGIYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 606
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ V+L + E F+ +M+ S ++K+I+ + K R++P ++
Sbjct: 607 GRTGRKRDGKIVLLFS-SNEGSKFEKAMENY-SNLQKLISQHHVE---YKKSDRILPDNI 661
Query: 274 TPR 276
P+
Sbjct: 662 IPK 664
>gi|315230780|ref|YP_004071216.1| ATP-dependent RNA helicase [Thermococcus barophilus MP]
gi|315183808|gb|ADT83993.1| ATP-dependent RNA helicase [Thermococcus barophilus MP]
Length = 770
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 119/218 (54%), Gaps = 30/218 (13%)
Query: 35 LASALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L A+E L T GL R++ L E ++ S L D ++K + + I +
Sbjct: 282 LHHAIELLETQGLTALRAYLKRLYE-ERQTKSNKELMSDP-------RMKKAVSLLIQAR 333
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMV 147
+ H K +L+E+++ EK +K+I+F NYR +V E+ D+ +
Sbjct: 334 DLGLDHPKMDKLKELIKEQL----EKKPNSKIIVFTNYRDTAKKIVKELVDM------GI 383
Query: 148 KASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDA 202
K S FVGQ+S G++Q++QKEI+ F G FN L+ATSVGEEGLD+ E+DLV+ ++
Sbjct: 384 KVSRFVGQASRENDRGMSQKKQKEILDLFSQGIFNVLVATSVGEEGLDVPEVDLVVFYEP 443
Query: 203 QKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
S I+ +QR GRTGR + GR VIL+ +G + S
Sbjct: 444 VPSAIRSIQRRGRTGRHKPGRVVILMAKGTRDEAYYWS 481
>gi|260951197|ref|XP_002619895.1| hypothetical protein CLUG_01054 [Clavispora lusitaniae ATCC 42720]
gi|238847467|gb|EEQ36931.1| hypothetical protein CLUG_01054 [Clavispora lusitaniae ATCC 42720]
Length = 962
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 109/187 (58%), Gaps = 21/187 (11%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q SG+ Q+ QK+++K F+ G +N L+ATS+GEEGLDIGE+DL++C+D+ SPIK VQR+
Sbjct: 500 AQISGMNQKMQKQLIKDFKKGSYNILVATSIGEEGLDIGEVDLIVCYDSTSSPIKNVQRM 559
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGR R+G+ ++L + E+ F +M + + IIN + + + R++P +
Sbjct: 560 GRTGRNRDGKVLLLFSSNEESK-FDKAMGGYEYIQQHIINGNMVTLH---DQNRILPPGI 615
Query: 274 TPRIKCLHIVVKDRVTPAKPSKKKPKENEKANKKSKK----KLETDGNSEPAGKQNKTNA 329
TP V ++++ + PKENE + + K+ T ++ K NK +A
Sbjct: 616 TP-------VAEEKLI------EIPKENEDIKAEDDEDEIIKIATKYMTKTKTKSNKLDA 662
Query: 330 KKTKKQP 336
KK K P
Sbjct: 663 KKGPKTP 669
>gi|365983092|ref|XP_003668379.1| hypothetical protein NDAI_0B01020 [Naumovozyma dairenensis CBS 421]
gi|343767146|emb|CCD23136.1| hypothetical protein NDAI_0B01020 [Naumovozyma dairenensis CBS 421]
Length = 977
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 82/122 (67%), Gaps = 5/122 (4%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q +G+ Q+ QKE +K+F+ G +N L+ TS+GEEGLDIGE+DL+IC+D SPIK +QR+
Sbjct: 546 AQINGMNQKRQKETIKEFKEGIYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRM 605
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV 273
GRTGRKR+G+ +ILL EA F+ +M+ S ++K+I I K R++P +
Sbjct: 606 GRTGRKRDGK-IILLFSSNEATKFEQAMENY-SNLQKLITKNFIE---YKKSDRILPTSI 660
Query: 274 TP 275
P
Sbjct: 661 NP 662
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 27 RDFHVTHSL---ASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDND-------LQNL 76
R+F + L L+ + YGLR+FYN + KE + LGK + +
Sbjct: 349 RNFFILQLLNHVGQMLKRIKIYGLRTFYNYFINKHKEFTTKYNLGKSTNKIAAGFYFHPI 408
Query: 77 LQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEI 136
L+ L+ D ++ + ++ H K +R+ L F A ++VIIF R EI
Sbjct: 409 LKTLRENCDKHVANPKF-LGHEKLQNIRDELIDFFENGAPD---SRVIIFTELRESALEI 464
Query: 137 FDVLKPL-EPMVKASMFVGQSSG 158
+ + + ++ +F+GQ+ G
Sbjct: 465 VKCVDSMNDKRIRPHIFIGQARG 487
>gi|406695545|gb|EKC98848.1| member of the DEAH family of helicase, Mph1p [Trichosporon asahii
var. asahii CBS 8904]
Length = 1118
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 92/146 (63%), Gaps = 9/146 (6%)
Query: 137 FDVLKPLEPMVKASMFVGQSSG-------VTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
D L +++ + FVGQS G + Q++QK+ + F+ G+FN L++TSVGEEGL
Sbjct: 528 LDALNDHPGLLRPTRFVGQSDGKKAGDRGLRQKDQKQAIADFKEGKFNILVSTSVGEEGL 587
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVE 249
DIGE+D +I +D + IK +QR+GRTGRKR+G +L+T+GRE N++ + QT +
Sbjct: 588 DIGEVDFIILYDMPQQSIKQIQRIGRTGRKRDGIVHVLMTEGREDGNWEKAQQTHRDIQR 647
Query: 250 KIINNKSIYANLAKNGPRMIPAHVTP 275
+I+ N ++ L ++ R++P P
Sbjct: 648 EILLNANL--ELFEDVERLLPPGDLP 671
>gi|397780382|ref|YP_006544855.1| fanconi anemia group M protein [Methanoculleus bourgensis MS2]
gi|396938884|emb|CCJ36139.1| fanconi anemia group M protein [Methanoculleus bourgensis MS2]
Length = 773
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 14/178 (7%)
Query: 87 NIMSSEYAWS---HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPL 143
N++ W H K + E++++ H E +++I+FA YR V + D L
Sbjct: 340 NLVEEAGRWGGELHPKASIVCELVQAQLAAHPE----SRIIVFATYRDTVQTLVDALSGC 395
Query: 144 EPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVI 198
+ FVGQ+S G+TQ+EQ EI+ +FR GEF LIATSVGEEGLD+ D+VI
Sbjct: 396 G--IACERFVGQASRDTERGLTQKEQIEILSRFREGEFRCLIATSVGEEGLDVPSTDMVI 453
Query: 199 CFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKS 256
++A S I+ +QR GRTGR +G V+L+T+G F+ QT + + + I N S
Sbjct: 454 FYEAVPSEIRSIQRKGRTGRSGSGTIVVLVTKGTSDETFRYVSQTRERAMVQGIRNMS 511
>gi|401885753|gb|EJT49841.1| member of the DEAH family of helicase [Trichosporon asahii var.
asahii CBS 2479]
Length = 1118
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 92/146 (63%), Gaps = 9/146 (6%)
Query: 137 FDVLKPLEPMVKASMFVGQSSG-------VTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
D L +++ + FVGQS G + Q++QK+ + F+ G+FN L++TSVGEEGL
Sbjct: 528 LDALNDHPGLLRPTRFVGQSDGKKAGDRGLRQKDQKQAIADFKEGKFNILVSTSVGEEGL 587
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVE 249
DIGE+D +I +D + IK +QR+GRTGRKR+G +L+T+GRE N++ + QT +
Sbjct: 588 DIGEVDFIILYDMPQQSIKQIQRIGRTGRKRDGIVHVLMTEGREDGNWEKAQQTHRDIQR 647
Query: 250 KIINNKSIYANLAKNGPRMIPAHVTP 275
+I+ N ++ L ++ R++P P
Sbjct: 648 EILLNANL--ELFEDVERLLPPGDLP 671
>gi|21227489|ref|NP_633411.1| Hef nuclease [Methanosarcina mazei Go1]
gi|20905864|gb|AAM31083.1| ATP-dependent RNA helicase, EIF-4A family [Methanosarcina mazei
Go1]
Length = 864
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 145/289 (50%), Gaps = 50/289 (17%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
++VI+F NYR + + L + V FVGQ S G+TQ++Q EI+++FRAGE
Sbjct: 376 SRVIVFTNYRDSAEMVVNALSRVSG-VNPVRFVGQGSRHKDKGLTQKQQVEILERFRAGE 434
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
+N L+ATSV EEGLDI DLV+ ++ S I+ +QR GRTGR+ GR +L+T+G
Sbjct: 435 YNALVATSVAEEGLDIPATDLVLFYEPVPSEIRSIQRKGRTGRQHKGRVTVLVTKGTRDE 494
Query: 236 NFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSK 295
+ S K+ ++++N S++ A GP+ + K + D V+ SK
Sbjct: 495 AYYWS---SKNKEKRMLN--SMHGLEAVLGPKNVK-------KSSELSDFDSVSFISDSK 542
Query: 296 KKPKENEKAN---------KKSKKKLETDG--NSE-----PAGKQNKTNAKKTKKQPMMT 339
+ K+N K + +S K+E+ N+E G KT K K +++
Sbjct: 543 PESKQNTKLDSYPEFQGIESESMDKIESGSLENTEDFPITDFGDPGKTEGKNGKDSEIIS 602
Query: 340 QSNDIRTC---------------FENITKKKKTFIDFLTQSSGEPVSAM 373
+ DI+ + NI +K+KT +DF T +SGE ++
Sbjct: 603 HTKDIKLQKNSDEIGKKEENEKDYANIKEKQKTLVDFGT-ASGESSDSL 650
>gi|409095334|ref|ZP_11215358.1| Hef nuclease [Thermococcus zilligii AN1]
Length = 796
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 100/168 (59%), Gaps = 12/168 (7%)
Query: 90 SSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKA 149
+ E H K +L+E++ + +K+I+F NYR +I + L+ +
Sbjct: 332 AKESGIDHPKMEKLKELIRGQL----GRKPNSKIIVFTNYRDTGKKIVEELR--REGISV 385
Query: 150 SMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
F+GQ+S G++Q+EQKEI+ KF GEF+ L+ATSVGEEGLD+ E+DLVI ++
Sbjct: 386 ERFIGQASRADDRGMSQREQKEILDKFSRGEFSVLVATSVGEEGLDVPEVDLVIFYEPVP 445
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKI 251
S I+ +QR GRTGR R G+ VIL+ +G R+ + +S + + +E I
Sbjct: 446 SAIRSIQRRGRTGRHRPGKVVILMAKGTRDEAYYWSSRRKERGMLEAI 493
>gi|410670654|ref|YP_006923025.1| Hef nuclease [Methanolobus psychrophilus R15]
gi|409169782|gb|AFV23657.1| Hef nuclease [Methanolobus psychrophilus R15]
Length = 759
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 83/128 (64%), Gaps = 6/128 (4%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
++VI+FANYR I L E ++ FVGQ+S G+TQ++Q I++KF+AGE
Sbjct: 376 SRVIVFANYRDTAEMITTALSGTE-HIRPIRFVGQASKYKDKGLTQKQQVGIIEKFKAGE 434
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
+NTLIATSV EEGLDI DLV+ ++ S I+ +QR GRTGRK GR V+L+T+G
Sbjct: 435 YNTLIATSVAEEGLDIPSTDLVLFYEPIPSEIRSIQRKGRTGRKHEGRVVVLITKGTRDE 494
Query: 236 NFQTSMQT 243
+ S Q+
Sbjct: 495 GYYWSSQS 502
>gi|452209972|ref|YP_007490086.1| ATP-dependent RNA helicase, EIF-4A family [Methanosarcina mazei
Tuc01]
gi|452099874|gb|AGF96814.1| ATP-dependent RNA helicase, EIF-4A family [Methanosarcina mazei
Tuc01]
Length = 845
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 50/289 (17%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
++VI+F NYR + + L + V FVGQ S G+TQ++Q EI+++FRAGE
Sbjct: 357 SRVIVFTNYRDSAEMVVNALSRVSG-VNPVRFVGQGSRHKDKGLTQKQQVEILERFRAGE 415
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
+N L+ATSV EEGLDI DLV+ ++ S I+ +QR GRTGR+ GR +L+T+G
Sbjct: 416 YNALVATSVAEEGLDIPATDLVLFYEPVPSEIRSIQRKGRTGRQHKGRVTVLVTKGTRDE 475
Query: 236 NFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSK 295
+ S K+ ++++N S++ GP+ + K + D V+ SK
Sbjct: 476 AYYWS---SKNKEKRMLN--SMHGLETVLGPKNVK-------KSSELSDFDSVSFISDSK 523
Query: 296 KKPKENEKAN---------KKSKKKLETDG--NSE-----PAGKQNKTNAKKTKKQPMMT 339
+ K+N K + +S K+E+ N+E G KT K K +++
Sbjct: 524 PESKQNTKLDSYPEFQGIESESMDKIESGSLENTEDFPITDFGDPGKTEGKNGKDSEIIS 583
Query: 340 QSNDIRTC---------------FENITKKKKTFIDFLTQSSGEPVSAM 373
+ DI+ + NI +K+KT +DF T +SGE ++
Sbjct: 584 HTKDIKLQKNSDEIGKKEENEKDYANIKEKQKTLVDFGT-ASGESSDSL 631
>gi|405123629|gb|AFR98393.1| fanconi anemia [Cryptococcus neoformans var. grubii H99]
Length = 1344
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 142/284 (50%), Gaps = 43/284 (15%)
Query: 31 VTHSLASALENLVTYGLRSFYNNLVE-VSKEDGSCPILGKDNDLQNLLQQLKPKLDINIM 89
V +A A+ +L+ + L F+++L E VS S G N + N + + + D++
Sbjct: 425 VLDKMARAMSHLLEFSLGMFHSSLDEMVSTSGKSKAGAGGANSIANNFEFQRLQRDVSQE 484
Query: 90 SSEY---------AWSHLKFIRLREILESHFRLHAEKGET------TKVIIFANYRVVVA 134
S A H K + E++ +HF E+ T T+ ++F + R V
Sbjct: 485 LSSIKIGRNGKTGADRHPKMQKALELMLAHFSQAEEEENTLGQKNNTRAMVFCSLRPCVM 544
Query: 135 EIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEI 194
E+ D+ +++A+ FVGQ+ ++TS+GEEGLDIGE+
Sbjct: 545 ELVDMFNEHSNLLRATKFVGQAH----------------------VSTSIGEEGLDIGEV 582
Query: 195 DLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINN 254
D V+ +D K IK++QR+GRTGRKR+G +L+++ RE N+ T+ QT + E+I+++
Sbjct: 583 DFVVLYDMPKQSIKLLQRIGRTGRKRDGIVHVLMSENREDTNWDTAQQTHRDIQEEILHS 642
Query: 255 KSIYANLAKNGPRMIPAHVTPRIKCLHIVVK-DRVTPAKPSKKK 297
+++ L ++ +IP P +CL V+ D P P KK
Sbjct: 643 RNL--ELFEDVEPLIPNRRMP--ECLEQVMPVDPWNPDDPQYKK 682
>gi|325957866|ref|YP_004289332.1| helicase domain-containing protein [Methanobacterium sp. AL-21]
gi|325329298|gb|ADZ08360.1| helicase domain protein [Methanobacterium sp. AL-21]
Length = 769
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 90/149 (60%), Gaps = 12/149 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K RL +IL+ K +++IIF +R V I+ +E + A F GQ+
Sbjct: 360 HPKLKRLMQILKKEL-----KNSNSRIIIFTQFRDSVENIYQ--HCMETNINAVKFYGQA 412
Query: 157 S-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++QKEI+K F+ GE++ LI+TSV EEG+DI +DLV+ ++ S I+M+Q
Sbjct: 413 SRENEKGLTQKKQKEIIKSFKNGEYDVLISTSVAEEGIDIPSVDLVVLYEPVPSEIRMIQ 472
Query: 212 RLGRTGRKRNGRCVILLTQGREAHNFQTS 240
R GRTGRK GR IL+T+G ++ S
Sbjct: 473 RRGRTGRKNRGRMFILITKGTRDESYYWS 501
>gi|320583687|gb|EFW97900.1| ATP-dependent DNA helicase [Ogataea parapolymorpha DL-1]
Length = 1082
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 23/153 (15%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q G+TQ+ QKE++ +F+ G +N L+ATS+GEEGLDIGE+DL++C+D+ SPIK +QR+
Sbjct: 565 AQLRGMTQRVQKELIAEFKKGVYNVLVATSIGEEGLDIGEVDLIVCYDSTSSPIKNIQRM 624
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKII---NNKSIYANLAKNGPRMIP 270
GRTGRKR+GR ++LL+ E F +M S+++ + NN + + R++P
Sbjct: 625 GRTGRKRDGRIILLLSSN-ERDKFDKAMDNY-SWIQTHLQAGNNIRFHPS-----DRIVP 677
Query: 271 AHVTPRIKCLHIVVKDRVTPAKPSKKKPKENEK 303
PR P K PKENE+
Sbjct: 678 KGCNPR-------------PEKKLIDIPKENEE 697
>gi|412991330|emb|CCO16175.1| unnamed protein product [Bathycoccus prasinos]
Length = 1601
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 103/215 (47%), Gaps = 52/215 (24%)
Query: 118 GETTKVIIFANYRVVVAEIFDVLKPLEPM------VKASMFVGQSSGVT----------- 160
G T+V+IF +YR V +I + L+ ++P VK + FVGQ SG
Sbjct: 617 GNDTRVMIFCSYRDTVRDIVEQLREIKPRGENACGVKVAPFVGQGSGENARDRRNREKQV 676
Query: 161 ---------------------------------QQEQKEIMKKFRAGEFNTLIATSVGEE 187
Q EQK +++ FR G N L+ATS+GEE
Sbjct: 677 LAQQQHKNNNNIKAGGGEGAADPLIFEKQKGQKQAEQKAVLEDFRNGNLNCLVATSIGEE 736
Query: 188 GLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSY 247
GLDI +DL++ +D I+ VQR+GRTGR RNG+ V+L T+G+E + F + ++
Sbjct: 737 GLDIPTVDLIVFYDVVDV-IRTVQRMGRTGRARNGKVVVLATKGKEHNKFTSELKKYHDL 795
Query: 248 VEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHI 282
K + Y + K+ PRMIP + P + + I
Sbjct: 796 QGK-MKTPDRYVVMCKDTPRMIPDEIFPSCELICI 829
>gi|255514192|gb|EET90454.1| DEAD/DEAH box helicase domain protein [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 517
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 111/199 (55%), Gaps = 17/199 (8%)
Query: 35 LASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQ--QLKPKLDINIMSSE 92
L A + + T G+ F N + + K L+++L+ ++K +DI + ++
Sbjct: 291 LVHAYDLISTEGIYPFLNYFESLQSREK------KSRSLESMLKNAEVKRAIDIAMHAAA 344
Query: 93 YAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMF 152
H K + +IL ++G + IIF YR + ++ D+L + A F
Sbjct: 345 AGEEHPKMWMIADILR-------QQGASKSTIIFVQYRSTIKKLVDILNG--EGISAMAF 395
Query: 153 VGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
VG+++GVTQ+ Q ++KFR+G+F L+A+S+GEEGLDI +D+VI ++ S I+ +QR
Sbjct: 396 VGKNNGVTQEMQSSTLEKFRSGKFKVLVASSIGEEGLDIPSVDMVIFYEPIPSAIRNIQR 455
Query: 213 LGRTGRKRNGRCVILLTQG 231
GRTGR R G +IL+T+G
Sbjct: 456 KGRTGRFRFGEVMILVTRG 474
>gi|327401630|ref|YP_004342469.1| helicase domain-containing protein [Archaeoglobus veneficus SNP6]
gi|327317138|gb|AEA47754.1| helicase domain protein [Archaeoglobus veneficus SNP6]
Length = 746
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 100/165 (60%), Gaps = 12/165 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K +L+E+++ E+ +++I+F N+R I + LK + + S FVGQ+
Sbjct: 344 HPKLEKLKEVVKKQL----EEKPDSRIIVFTNFRDTAEVIVEELK--KEGIPVSRFVGQA 397
Query: 157 S-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
G++Q+EQ E +++FR+GE L+ATSVGEEGLDI DLV+ ++A S I+ +Q
Sbjct: 398 KRFEKKGMSQKEQVETLERFRSGEIKVLVATSVGEEGLDIPSTDLVVFYEAVPSEIRAIQ 457
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNK 255
R GRTGR R GR V+L+T+G R+ + SM+ K+ K+ K
Sbjct: 458 RKGRTGRAREGRIVVLITKGTRDEAYYWASMRKEKAMYLKLYELK 502
>gi|336476206|ref|YP_004615347.1| helicase domain-containing protein [Methanosalsum zhilinae DSM
4017]
gi|335929587|gb|AEH60128.1| helicase domain protein [Methanosalsum zhilinae DSM 4017]
Length = 776
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 120/216 (55%), Gaps = 27/216 (12%)
Query: 38 ALENLVTYGLRSFYNNLVEVSKEDGS------CPILGKDNDLQNLLQQLKPKLDINIMSS 91
A+E T G+ S + + E GS LG+D ++ ++ +LK LD+
Sbjct: 297 AIEVAETQGIESLTRYIQRLENEAGSKGGSKASRRLGEDLYMRQVVHRLK-GLDLE---- 351
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
H K ++ I++ +K ++VI+F NYR + +L +E +
Sbjct: 352 -----HPKLNYVKNIVQDQL----QKNPESRVIVFTNYRDTADMVTCMLSEVEG-ISPVR 401
Query: 152 FVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
FVGQSS G+TQ++Q EI++KF++G+FN L+ATSV EEGLDI DLV+ ++ S
Sbjct: 402 FVGQSSKYKDKGLTQKQQVEIIEKFKSGDFNVLVATSVAEEGLDIPATDLVLFYEPVPSE 461
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSM 241
I+ +QR GRTGRK GR V+L+T+G R+ + +S+
Sbjct: 462 IRSIQRKGRTGRKHRGRVVVLVTRGTRDEAYYWSSV 497
>gi|91772921|ref|YP_565613.1| Hef nuclease [Methanococcoides burtonii DSM 6242]
gi|91711936|gb|ABE51863.1| Hef helicase [Methanococcoides burtonii DSM 6242]
Length = 769
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 80/116 (68%), Gaps = 6/116 (5%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
++VI+F NYR + + L ++ ++ FVGQSS G+TQ++Q EI++KF+AGE
Sbjct: 379 SRVIVFTNYRDTSEMVTNALSEIKD-IRPVKFVGQSSKFKDKGLTQKQQVEIIEKFKAGE 437
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
+N L+ATSV EEGLDI DLV+ ++ S I+ +QR GRTGRK GR V+L+T+G
Sbjct: 438 YNVLVATSVAEEGLDIPATDLVVFYEPVPSEIRSIQRKGRTGRKHEGRVVVLVTKG 493
>gi|333988597|ref|YP_004521204.1| helicase domain-containing protein [Methanobacterium sp. SWAN-1]
gi|333826741|gb|AEG19403.1| helicase domain-containing protein [Methanobacterium sp. SWAN-1]
Length = 772
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 96/151 (63%), Gaps = 14/151 (9%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K +L +IL++ K +++I+F +R V + +D K +E + A F GQ+
Sbjct: 345 HPKLEKLIKILKNEL-----KNPESRIIVFTQFRDTVNKAYD--KCMENNINAVKFFGQA 397
Query: 157 S-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++QKEI+K F+ G ++ LI+TSV EEG+DI +DLV+ ++ S I+M+Q
Sbjct: 398 SRDTEKGLTQKKQKEIIKNFKKGVYDVLISTSVAEEGIDIPSVDLVVLYEPVPSEIRMIQ 457
Query: 212 RLGRTGRKRNGRCVILLTQGR--EAHNFQTS 240
R GRTGRK GR +IL+T+G EA+ + +S
Sbjct: 458 RRGRTGRKNKGRMIILMTKGTRDEAYYWSSS 488
>gi|73668740|ref|YP_304755.1| Hef nuclease [Methanosarcina barkeri str. Fusaro]
gi|72395902|gb|AAZ70175.1| ATP-dependent RNA helicase, EIF-4A family [Methanosarcina barkeri
str. Fusaro]
Length = 938
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 82/128 (64%), Gaps = 6/128 (4%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
++VI+F NYR + + L + P + FVGQ+S G+TQ++Q E++ KFRAGE
Sbjct: 376 SRVIVFTNYRDTAEIVVNALSEI-PEIVPIRFVGQASRRKDKGLTQKQQVEVLDKFRAGE 434
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
+N L+ATSV EEGLDI DLV+ ++ S I+ +QR GRTGR+ GR +IL+T+G
Sbjct: 435 YNVLVATSVAEEGLDIPSTDLVLFYEPIPSEIRSIQRKGRTGRQHKGRVIILVTKGTRDE 494
Query: 236 NFQTSMQT 243
+ S ++
Sbjct: 495 AYYWSSKS 502
>gi|408381096|ref|ZP_11178646.1| Hef nuclease [Methanobacterium formicicum DSM 3637]
gi|407816361|gb|EKF86923.1| Hef nuclease [Methanobacterium formicicum DSM 3637]
Length = 799
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 118/224 (52%), Gaps = 27/224 (12%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPK 83
M+ F V HSL LE L S+++ + + K+ + L KD + K
Sbjct: 298 MLTAVFSVMHSL-ELLETQGVSNLHSYFDRMRK--KKTKAAKGLFKDENF---------K 345
Query: 84 LDINIMSSEY--AWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK 141
+N+ Y H K +L EIL+S AE E +VI+F+ YR V I+ K
Sbjct: 346 TAVNLTRQAYDKGVEHPKLGKLMEILKSA----AEDKE--QVIVFSQYRDTVNHIYR--K 397
Query: 142 PLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDL 196
E + A F GQ+S G+TQ+EQK+I+K FR + LI+TSV EEG+DI +DL
Sbjct: 398 CQEEGINAVKFFGQASRDKEKGLTQKEQKDIIKAFRMRTYQVLISTSVAEEGIDIPSVDL 457
Query: 197 VICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
V+ ++ S I+M+QR GRTGR +GR ++L+T+ +F S
Sbjct: 458 VVLYEPVPSEIRMIQRRGRTGRTTSGRMIVLITKKTRDESFYYS 501
>gi|386002261|ref|YP_005920560.1| Putative ATP-dependent RNA helicase [Methanosaeta harundinacea 6Ac]
gi|357210317|gb|AET64937.1| Putative ATP-dependent RNA helicase [Methanosaeta harundinacea 6Ac]
Length = 788
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 6/117 (5%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPL-EPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAG 174
+++++F NYR + + D L+ + +++ FVGQSS G++Q+ Q EI++KFR G
Sbjct: 370 SRIMVFTNYRDTASSVLDYLREAGDEIIRPVRFVGQSSRASDEGLSQRRQAEILQKFREG 429
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
+N LIATSVGEEG+DI DLV+ ++ S I+ +QR GRTGR R GR V+L+ +G
Sbjct: 430 AYNVLIATSVGEEGIDIPATDLVLFYEPVPSEIRSIQRKGRTGRARAGRVVVLVARG 486
>gi|268325930|emb|CBH39518.1| putative ATP-dependent RNA helicase [uncultured archaeon]
Length = 780
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 93/156 (59%), Gaps = 12/156 (7%)
Query: 84 LDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPL 143
+D M++ Y H K + +IL FR++ T++I+F NYR I L+
Sbjct: 339 VDAMSMAASYEGEHPKLNAVIQILREEFRVNP----NTRIIVFTNYRDTAEMIISGLQDR 394
Query: 144 ---EPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEID 195
E ++A F+GQ++ G+ Q+EQ EI+ KF+AG++N L+ATSV EEGLDI D
Sbjct: 395 NSEEEGIRAVKFIGQATKAEDKGLKQKEQVEIITKFKAGDYNVLVATSVAEEGLDIPATD 454
Query: 196 LVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
LV+ ++ S I+ +QR GRT RK+ G+ ++L+ +G
Sbjct: 455 LVLFYEPIPSAIRSIQRKGRTARKKVGKVIVLIAKG 490
>gi|147920338|ref|YP_685889.1| Hef nuclease [Methanocella arvoryzae MRE50]
gi|110621285|emb|CAJ36563.1| putative type III restriction-modification system, restriction
subunit [Methanocella arvoryzae MRE50]
Length = 792
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 84/126 (66%), Gaps = 7/126 (5%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
+KVI+F NYR + L +E +K FVGQ+S G++Q++Q EI+ +FRAGE
Sbjct: 371 SKVIVFTNYRDTADVVAKRLAEVEG-IKPVRFVGQASKLNDKGLSQKKQVEILDRFRAGE 429
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG-REA 234
+NTLIATSV EEGLDI DLV+ ++ S I+ +QR GRTGR GR V+L+++G R+
Sbjct: 430 YNTLIATSVAEEGLDIPSTDLVLFYEPVPSEIRSIQRRGRTGRNTVGRVVVLISKGTRDE 489
Query: 235 HNFQTS 240
+++S
Sbjct: 490 AAYRSS 495
>gi|126179364|ref|YP_001047329.1| Hef nuclease [Methanoculleus marisnigri JR1]
gi|125862158|gb|ABN57347.1| helicase domain protein [Methanoculleus marisnigri JR1]
Length = 751
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 93/165 (56%), Gaps = 14/165 (8%)
Query: 87 NIMSSEYAWS---HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPL 143
+++ + W H K +RE++ + H E +++I+FA YR V + D L
Sbjct: 340 SLVEAAAGWKEELHPKASIVRELVRAQLAAHPE----SRIIVFATYRDTVQTLVDTLTA- 394
Query: 144 EPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVI 198
+ FVGQ+S G++Q+EQ + +FR GEF L+ATSVGEEGLD+ D+VI
Sbjct: 395 -AGIACERFVGQASRDAERGLSQKEQIASLARFREGEFRCLVATSVGEEGLDVPSTDMVI 453
Query: 199 CFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQT 243
++A S I+ +QR GRTGR +G V+L+T+G F+ Q+
Sbjct: 454 FYEAVPSEIRSIQRKGRTGRSGSGTIVVLVTKGTSDETFRYVSQS 498
>gi|148643247|ref|YP_001273760.1| Hef nuclease [Methanobrevibacter smithii ATCC 35061]
gi|222445478|ref|ZP_03607993.1| hypothetical protein METSMIALI_01117 [Methanobrevibacter smithii
DSM 2375]
gi|261349960|ref|ZP_05975377.1| putative ATP-dependent RNA helicase [Methanobrevibacter smithii DSM
2374]
gi|148552264|gb|ABQ87392.1| ERCC4-like helicase [Methanobrevibacter smithii ATCC 35061]
gi|222435043|gb|EEE42208.1| helicase C-terminal domain protein [Methanobrevibacter smithii DSM
2375]
gi|288860743|gb|EFC93041.1| putative ATP-dependent RNA helicase [Methanobrevibacter smithii DSM
2374]
Length = 772
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 83/123 (67%), Gaps = 7/123 (5%)
Query: 120 TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAG 174
++K+++F YR + I L+ + +K++ F GQ+S G+TQ+EQKEI+K F+ G
Sbjct: 380 SSKIMVFTQYRDSLEMIHQKLE--KEGIKSAKFFGQASRDGEKGLTQKEQKEIIKAFKIG 437
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREA 234
E++ L++TSV EEG+DI +DLVI ++ S ++M+QR GRTGRKR+GR +L+T G
Sbjct: 438 EYDVLLSTSVAEEGIDIPAVDLVILYEPVPSEVRMIQRRGRTGRKRSGRVKVLITNGTRD 497
Query: 235 HNF 237
+
Sbjct: 498 EGY 500
>gi|20088995|ref|NP_615070.1| Hef nuclease [Methanosarcina acetivorans C2A]
gi|19913848|gb|AAM03550.1| helicase [Methanosarcina acetivorans C2A]
Length = 821
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 77/116 (66%), Gaps = 6/116 (5%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
++VI+F NYR + + L ++ FVGQ S G+TQ++Q EI+ KFRAGE
Sbjct: 364 SRVIVFTNYRDTAEIVANALSGFSGIIPIR-FVGQGSRNKNKGLTQKQQAEILDKFRAGE 422
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
+N L+ATSV EEGLDI D+V+ ++ S I+ +QR GRTGR++ GR ++L+T+G
Sbjct: 423 YNVLVATSVAEEGLDIPATDMVLFYEPIPSEIRSIQRKGRTGRQQKGRVIVLVTKG 478
>gi|432331590|ref|YP_007249733.1| ERCC4-like helicase [Methanoregula formicicum SMSP]
gi|432138299|gb|AGB03226.1| ERCC4-like helicase [Methanoregula formicicum SMSP]
Length = 749
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 104/185 (56%), Gaps = 21/185 (11%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
+++IIFA YR V + D L + + + FVGQ++ G++Q+ Q + +FR G
Sbjct: 375 SRIIIFATYRDTVQLLVDYLA--KHGIDSERFVGQATKDAEKGLSQKMQIAALTRFREGV 432
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
F L+ATSVGEEGLD+ DLVI ++A S I+ +QR GRTGR GR V+L+T+G
Sbjct: 433 FKVLVATSVGEEGLDVPSTDLVIFYEAVPSEIRSIQRKGRTGRSGAGRVVVLVTKGTSDE 492
Query: 236 NFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHV--------TPRIKCLHIVVKDR 287
F+ + T K EK+++ N A + PR IP V TP + + IV+ DR
Sbjct: 493 VFR-HVSTAK---EKMMHKSMRSLNRALSPPRKIPLAVEQASIEEFTP--QGIKIVIDDR 546
Query: 288 VTPAK 292
T +K
Sbjct: 547 ETSSK 551
>gi|282162816|ref|YP_003355201.1| putative ATP-dependent helicase [Methanocella paludicola SANAE]
gi|282155130|dbj|BAI60218.1| putative ATP-dependent helicase [Methanocella paludicola SANAE]
Length = 765
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 83/127 (65%), Gaps = 7/127 (5%)
Query: 120 TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAG 174
++++I+F N+R + L +E VK FVGQ+S G++Q++Q EI+ FRAG
Sbjct: 364 SSRIIVFTNFRDTAEFVSRELAAVEG-VKPVRFVGQASKLNDKGLSQKKQVEILDAFRAG 422
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG-RE 233
EFNTLIATSV EEGLDI DLVI ++ S I+ +QR GRTGR GR ++L+++G R+
Sbjct: 423 EFNTLIATSVAEEGLDIPSTDLVIFYEPVPSEIRSIQRRGRTGRNAVGRVIVLISKGTRD 482
Query: 234 AHNFQTS 240
++ S
Sbjct: 483 EGTYRVS 489
>gi|124485977|ref|YP_001030593.1| Hef nuclease [Methanocorpusculum labreanum Z]
gi|124363518|gb|ABN07326.1| DEAD/DEAH box helicase domain protein [Methanocorpusculum labreanum
Z]
Length = 763
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 79/116 (68%), Gaps = 7/116 (6%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
+++I+FA YR V+ + D L + + A FVGQ+S G++Q+EQ E +++FR GE
Sbjct: 365 SRIIVFATYRDGVSMLVDHLA--KAGIPAKRFVGQASRDTEKGLSQKEQIEAIRQFREGE 422
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
+ L+ATSVGEEGLDI DLVI ++A S I+ +QR GRTGR G+ ++L+T+G
Sbjct: 423 YTVLVATSVGEEGLDIPSTDLVIFYEAVPSEIRSIQRKGRTGRNSTGKIIVLVTRG 478
>gi|410721664|ref|ZP_11360996.1| ERCC4-like helicase [Methanobacterium sp. Maddingley MBC34]
gi|410598574|gb|EKQ53144.1| ERCC4-like helicase [Methanobacterium sp. Maddingley MBC34]
Length = 780
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 118/224 (52%), Gaps = 27/224 (12%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPK 83
M+ F V HSL LE L S+++ + + K+ + L KD + K
Sbjct: 283 MLTAVFSVMHSL-ELLETQGVSNLHSYFDRMRK--KKTKAAKGLFKDENF---------K 330
Query: 84 LDINIMSSEY--AWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK 141
+N+ Y H K +L EIL+ AE + +VI+F+ YR V +I+ K
Sbjct: 331 TAVNLTRQAYNNGVEHPKLGKLMEILKDA----AE--DKQQVIVFSQYRDTVNQIYT--K 382
Query: 142 PLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDL 196
+ + A F GQ+S G+TQ+EQK+I+K FR + LI+TSV EEG+DI +DL
Sbjct: 383 CQKEGINAVKFFGQASREKEKGLTQKEQKDIIKAFRMRTYQVLISTSVAEEGIDIPSVDL 442
Query: 197 VICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
V+ ++ S I+M+QR GRTGR +GR ++L+T+ +F S
Sbjct: 443 VVLYEPVPSEIRMIQRRGRTGRTTSGRMIVLITKNTRDESFYYS 486
>gi|298675601|ref|YP_003727351.1| ERCC4 domain-containing protein [Methanohalobium evestigatum
Z-7303]
gi|298288589|gb|ADI74555.1| ERCC4 domain protein [Methanohalobium evestigatum Z-7303]
Length = 759
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 123/234 (52%), Gaps = 33/234 (14%)
Query: 38 ALENLVTYG---LRSFYNNL-VEVSKEDGS--CPILGKDNDLQNLLQQLKPKLDINIMSS 91
ALE L T G L +Y+ L E + GS L +D +Q + +LK
Sbjct: 293 ALEVLETQGVDALTKYYDRLDREAGLKSGSKASKRLAEDPYMQQISHRLK---------- 342
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
E + H K REI+ E+ ++ I+F NYR + ++L ++ V
Sbjct: 343 ECSSEHPKLEMTREIVSKQL----EENPDSRAIVFTNYRDTAEMLANLLSEMDG-VYPIR 397
Query: 152 FVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
FVGQSS G+TQ++Q EI+ KF+ GE+N +++TSV EEGLDI DLV+ ++ S
Sbjct: 398 FVGQSSKYNDKGLTQKQQVEIIDKFKTGEYNVIVSTSVAEEGLDIPSTDLVLFYEPVPSE 457
Query: 207 IKMVQRLGRTGRKRNGRCVILLT-QGREAHNFQTS------MQTCKSYVEKIIN 253
I+ +QR GRT RK+ GR V+L+T + R+ + +S MQ Y++ I++
Sbjct: 458 IRSIQRKGRTARKQEGRVVVLVTKETRDEAYYWSSVSKERKMQDNMKYLQDIMS 511
>gi|303277201|ref|XP_003057894.1| dead-box like helicase with PHD domain [Micromonas pusilla
CCMP1545]
gi|226460551|gb|EEH57845.1| dead-box like helicase with PHD domain [Micromonas pusilla
CCMP1545]
Length = 1823
Score = 104 bits (260), Expect = 7e-20, Method: Composition-based stats.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 79/262 (30%)
Query: 89 MSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK------- 141
M+ A K RL +I+ HF A T+ I+F +YR V +I L+
Sbjct: 673 MAGHGAHHSPKLARLTQIIRRHF---ATNNPATRAIVFTSYRDSVRDIVRALREVTVTTG 729
Query: 142 ------PLEPMV-----------------------------------------KASMFVG 154
P +P+V K + F+G
Sbjct: 730 GGNNLGPGDPLVDPEKGQKTVTGMFSAASGSGGGSGDTAGVPPEVPDGAECRIKVAEFIG 789
Query: 155 Q--------------------SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEI 194
Q + G +Q+EQK ++ FR G NT++ATS+GEEGLDI +
Sbjct: 790 QGDSSKGGGGGGAKGAGAARGTKGQSQKEQKAVLDAFRHGSLNTIVATSIGEEGLDIPAV 849
Query: 195 DLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINN 254
DL++ FD + I+ +QR+GRTGR R+G+ V+L +GREA F + Q ++ + +++
Sbjct: 850 DLIVFFDVVDT-IRTIQRMGRTGRARDGKVVVLALEGREAEKF-SKEQGKYEHLLRSLSD 907
Query: 255 KSIYANLAKNGPRMIPAHVTPR 276
L + PRM+PA + PR
Sbjct: 908 PGRCFQLCNDCPRMLPAGLDPR 929
>gi|294495366|ref|YP_003541859.1| ERCC4 domain protein [Methanohalophilus mahii DSM 5219]
gi|292666365|gb|ADE36214.1| ERCC4 domain protein [Methanohalophilus mahii DSM 5219]
Length = 754
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 6/125 (4%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
++VI+F N+R + D L +E + FVGQSS G+TQ++Q EI+ F+ G
Sbjct: 369 SRVIVFTNFRDTAEMVTDALSEIED-INPVKFVGQSSKYKDKGLTQKQQVEIIDHFKQGN 427
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
FN L+ATSV EEGLDI DLV+ ++ S I+ +QR GRTGRK GR V+L+T+G
Sbjct: 428 FNVLVATSVAEEGLDIPATDLVVFYEPIPSEIRSIQRKGRTGRKHAGRVVVLVTKGTRDE 487
Query: 236 NFQTS 240
+ S
Sbjct: 488 GYYWS 492
>gi|383319514|ref|YP_005380355.1| ERCC4-like helicase [Methanocella conradii HZ254]
gi|379320884|gb|AFC99836.1| ERCC4-like helicase [Methanocella conradii HZ254]
Length = 765
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 82/127 (64%), Gaps = 7/127 (5%)
Query: 120 TTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAG 174
++++I+F N+R + L +E ++ FVGQ+S G+TQ+ Q EI+ FR+G
Sbjct: 377 SSRIIVFTNFRDTADFVSKELAKVEG-IRPVRFVGQASKLNDKGLTQKRQVEILNAFRSG 435
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG-RE 233
EFNTLIATSV EEGLDI DLVI ++ S I+ +QR GRTGR GR V+L+++G R+
Sbjct: 436 EFNTLIATSVAEEGLDIPSTDLVIFYEPVPSEIRTIQRRGRTGRNAVGRVVVLISKGTRD 495
Query: 234 AHNFQTS 240
++ S
Sbjct: 496 EGTYRVS 502
>gi|385802402|ref|YP_005838802.1| ATP-dependent RNA helicase/nuclease Hef [Haloquadratum walsbyi C23]
gi|339727894|emb|CCC39004.1| ATP-dependent RNA helicase/nuclease Hef [Haloquadratum walsbyi C23]
Length = 855
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 20/151 (13%)
Query: 89 MSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVK 148
++ + +H KF R R IL L E GE +VIIF R D + L +
Sbjct: 344 LAESFDGTHPKFSRTRIILAQT--LGIEGGE--RVIIFTESR-------DTAEALTEFLS 392
Query: 149 ASM----FVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVIC 199
AS FVGQ S G+TQ+EQ++ + FR+GEF L++TSV EEGLD+ E+DLV+
Sbjct: 393 ASFDVQRFVGQNDTGRSEGMTQREQQKALTAFRSGEFEVLVSTSVAEEGLDVPEVDLVLF 452
Query: 200 FDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
F+ + I+ +QR GRTGR+ GR V+LL +
Sbjct: 453 FEPVPTAIRSIQRKGRTGRQTEGRVVVLLAE 483
>gi|429191672|ref|YP_007177350.1| ERCC4-like helicase [Natronobacterium gregoryi SP2]
gi|448325183|ref|ZP_21514580.1| Hef nuclease [Natronobacterium gregoryi SP2]
gi|429135890|gb|AFZ72901.1| ERCC4-like helicase [Natronobacterium gregoryi SP2]
gi|445616172|gb|ELY69802.1| Hef nuclease [Natronobacterium gregoryi SP2]
Length = 803
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 12/144 (8%)
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
E+ H K+ + R IL L E GE +VI+F R + D L +A
Sbjct: 348 EFDQLHPKYRKTRMILAETLGL--EDGE--RVIVFTESRDTAEALTDFLSE---SFEAKR 400
Query: 152 FVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
FVGQ S G+TQ EQ+E++ FRAGEF LI+TSV EEGLD+ E+DLV+ ++ +
Sbjct: 401 FVGQGDREGSDGMTQNEQQEVLDDFRAGEFEVLISTSVAEEGLDVPEVDLVLFYEPVPTA 460
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQ 230
I+ +QR GRTGR+ GR V+L+ +
Sbjct: 461 IRSIQRKGRTGRQSEGRVVVLMAE 484
>gi|110666996|ref|YP_656807.1| Hef nuclease [Haloquadratum walsbyi DSM 16790]
gi|109624743|emb|CAJ51150.1| ATP-dependent RNA helicase/nuclease Hef [Haloquadratum walsbyi DSM
16790]
Length = 851
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 20/151 (13%)
Query: 89 MSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVK 148
++ + +H KF R R +L L E GE +VIIF R D + L +
Sbjct: 344 LAESFDGTHPKFSRTRILLAQT--LGIEGGE--RVIIFTESR-------DTAEALTEFLS 392
Query: 149 ASM----FVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVIC 199
AS FVGQ S G+TQ+EQ++ + FR+GEF LI+TSV EEGLD+ E+DLV+
Sbjct: 393 ASFDVQRFVGQNDTGRSEGMTQREQQKALTAFRSGEFEVLISTSVAEEGLDVPEVDLVLF 452
Query: 200 FDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
F+ + I+ +QR GRTGR+ GR V+LL +
Sbjct: 453 FEPVPTAIRSIQRKGRTGRQTEGRVVVLLAE 483
>gi|395646185|ref|ZP_10434045.1| helicase domain-containing protein [Methanofollis liminatans DSM
4140]
gi|395442925|gb|EJG07682.1| helicase domain-containing protein [Methanofollis liminatans DSM
4140]
Length = 738
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 84/131 (64%), Gaps = 11/131 (8%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVT 160
+++ LH E ++ I+FA +R VA + + L+ E + A FVGQ+S G++
Sbjct: 357 LVKEQVALHPE----SRTIVFATFRDTVALLVEALR--EAGIGAERFVGQASRDAEKGLS 410
Query: 161 QQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKR 220
Q++Q +++++FR GEF ++ATSVGEEGLD+ DLV+ ++A S I+ +QR GRTGR
Sbjct: 411 QKKQIDVLRRFREGEFPVIVATSVGEEGLDVPSTDLVVFYEAVPSEIRSIQRKGRTGRSG 470
Query: 221 NGRCVILLTQG 231
GR V+ T+G
Sbjct: 471 TGRIVVFTTKG 481
>gi|88602972|ref|YP_503150.1| Hef nuclease [Methanospirillum hungatei JF-1]
gi|88188434|gb|ABD41431.1| helicase-like protein [Methanospirillum hungatei JF-1]
Length = 750
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 85/147 (57%), Gaps = 11/147 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG-- 154
H K + L E+++S ++ T++I+FA YR V + D L+ + A FVG
Sbjct: 350 HPKLLILPELVQSIL----DESPDTRIIVFATYRDTVKMVVDTLQA--AGISAERFVGKA 403
Query: 155 ---QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
Q G++Q+ Q + +FR GEF+ L+ATSVGEEGLDI D+VI ++ S I+ +Q
Sbjct: 404 NKDQEKGLSQKRQIATISRFREGEFSVLVATSVGEEGLDIPSTDVVIFYEPVPSEIRSIQ 463
Query: 212 RLGRTGRKRNGRCVILLTQGREAHNFQ 238
R GRTGR GR ++L+T+ FQ
Sbjct: 464 RKGRTGRHNTGRIIVLVTRKTTDETFQ 490
>gi|336252885|ref|YP_004595992.1| helicase domain-containing protein [Halopiger xanaduensis SH-6]
gi|335336874|gb|AEH36113.1| helicase domain-containing protein [Halopiger xanaduensis SH-6]
Length = 831
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 96/173 (55%), Gaps = 13/173 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + D L A FVGQ
Sbjct: 353 HPKYRKTRMLLAETLGL--EGGE--RVIVFTESRDTAEALTDFLSE---SFDAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ EQ+E++ +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQTEQQEVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANLAK 263
R GRTGR+ GR V+L+ + R+ F S + K ++ K + +LA+
Sbjct: 466 RKGRTGRQSEGRVVVLMAEDTRDEAYFWISRRREKEMENELRELKGMADDLAE 518
>gi|383620096|ref|ZP_09946502.1| Hef nuclease [Halobiforma lacisalsi AJ5]
gi|448696209|ref|ZP_21697770.1| Hef nuclease [Halobiforma lacisalsi AJ5]
gi|445783897|gb|EMA34721.1| Hef nuclease [Halobiforma lacisalsi AJ5]
Length = 828
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 83/139 (59%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + D L +A FVGQ
Sbjct: 353 HPKYRKTRMLLAETLGL--EDGE--RVIVFTESRDTAEALTDFLSE---SFEAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ EQ+E++ +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQTEQQEVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+L+ +
Sbjct: 466 RKGRTGRQSEGRVVVLMAE 484
>gi|11499053|ref|NP_070287.1| Hef nuclease [Archaeoglobus fulgidus DSM 4304]
gi|2649107|gb|AAB89786.1| ATP-dependent RNA helicase, putative [Archaeoglobus fulgidus DSM
4304]
Length = 741
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 113/197 (57%), Gaps = 17/197 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K +L+EIL+ F EK ++VI+F NYR + + L PL P+ K FVGQ+
Sbjct: 343 HPKLEKLKEILKEQF----EKNPDSRVIVFTNYRDSAEMLVNELSPLFPVAK---FVGQA 395
Query: 157 S-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+ Q+EQ E + KFR G + L+ATSVGEEGLDI DLV+ ++A S I+ +Q
Sbjct: 396 SRDNDKGMRQKEQIETIDKFRRGVYKVLVATSVGEEGLDIPSTDLVVFYEAVPSEIRAIQ 455
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIP 270
R GRTGR R GR V+L+T+G R+ + +SM+ + +KI+ K I R I
Sbjct: 456 RKGRTGRGREGRIVVLVTKGTRDEAYYYSSMKKERKMYDKILEIKRII----DRKQRSIG 511
Query: 271 AHVTPRIKCLHIVVKDR 287
+V P + ++V R
Sbjct: 512 DYVLPEETGIKVIVDSR 528
>gi|289596778|ref|YP_003483474.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
T469]
gi|289534565|gb|ADD08912.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
T469]
Length = 756
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 38 ALENLVTYGLRSFYNNLVEVSKEDGS------CPILGKDNDLQNLLQQLKPKLDINIMSS 91
ALE L T G + YN L+ + +E S L +D + ++ +K I
Sbjct: 287 ALEYLETQGFEAAYNYLLRIIEEGNSKGGSKAARTLVRD---ERFIEMMKIARKIEERKG 343
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
+ L +R+ R + + +++I+F ++R + + L + P V+A+
Sbjct: 344 DIENPKLNALRV------IIRKELAENKDSRIIVFTHFRETAQLVANALNEV-PGVRAAR 396
Query: 152 FVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
FVGQ+S G+ Q+EQ E+++KF+ GE+N L+ATSV EEGLDI D+VI ++ S
Sbjct: 397 FVGQASKGEDKGLRQKEQVELVEKFKKGEYNVLVATSVAEEGLDIPATDMVIFYEPVPSE 456
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQG 231
I+ +QR GRTGR R G+ VIL +G
Sbjct: 457 IRSIQRRGRTGRARIGKVVILTIKG 481
>gi|257386865|ref|YP_003176638.1| Hef nuclease [Halomicrobium mukohataei DSM 12286]
gi|257169172|gb|ACV46931.1| helicase domain protein [Halomicrobium mukohataei DSM 12286]
Length = 851
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 93/171 (54%), Gaps = 13/171 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H KF R R +L L E GE +VI+F R + D L + FVGQS
Sbjct: 357 HPKFRRTRMLLAE--TLGIENGE--RVIVFTESRDTAETLTDFLSD---HFETEKFVGQS 409
Query: 157 S-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
G+TQ +Q+E + +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 410 DTEGSEGMTQTQQQETLDRFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 469
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANL 261
R GRTGR+ GR V+LL + R+ F S Q + +++ K + L
Sbjct: 470 RKGRTGRQTEGRVVVLLAEDTRDEAYFWKSRQDEQRMEDELRTLKGVAGQL 520
>gi|448312646|ref|ZP_21502386.1| Hef nuclease [Natronolimnobius innermongolicus JCM 12255]
gi|445600842|gb|ELY54842.1| Hef nuclease [Natronolimnobius innermongolicus JCM 12255]
Length = 820
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 96/171 (56%), Gaps = 13/171 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + D L A FVGQ
Sbjct: 353 HPKYRKTRMLLAETLGL--EGGE--RVIVFTESRDTAEALTDFLSD---SFDAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q+E++ FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQKQQQEVLNDFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANL 261
R GRTGR+ GR V+L+ + R+ F S + K ++ + KS+ +L
Sbjct: 466 RKGRTGRQSEGRVVVLMAEDTRDEAYFWISRRREKEMESELRDLKSVSDDL 516
>gi|170516811|gb|ACB15213.1| ATP-dependent RNA helicase EIF-4A family [uncultured marine group
II euryarchaeote DeepAnt-15E7]
Length = 596
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 16/171 (9%)
Query: 91 SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEI---FDVLKPLEPMV 147
SE H K +R ++ R + +++I+FA +R VA + D L P+
Sbjct: 339 SEMGEIHTKVSAVRRLVSERLR----RNSNSRIIVFATFRDTVAAVEKSLDELDGARPI- 393
Query: 148 KASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDA 202
FVGQSS G+T ++Q E + KFR+G N L+ATSVGEEGLDI DLVI ++
Sbjct: 394 ---QFVGQSSREGRDGLTPKQQIERLDKFRSGSANILVATSVGEEGLDIPSADLVIFYEP 450
Query: 203 QKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIIN 253
S I+ +QR GRTGR R G V+L+ + + S + + ++++ ++
Sbjct: 451 VSSEIRTIQRRGRTGRHREGEVVVLIAEDTRDEGARASAERREEFMQRAVH 501
>gi|322368028|ref|ZP_08042597.1| Hef nuclease [Haladaptatus paucihalophilus DX253]
gi|320552044|gb|EFW93689.1| Hef nuclease [Haladaptatus paucihalophilus DX253]
Length = 806
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 85/145 (58%), Gaps = 10/145 (6%)
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVL-KPLEPMVKAS 150
+Y H KF ++R + L+ GE ++I+F R + D L + A
Sbjct: 348 QYEGRHPKFQKVRTYVAETLGLN--DGE--RIIVFTESRDTAETLTDFFNDELGSQLTAR 403
Query: 151 MFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKS 205
FVGQ S G+TQ+EQ+E + KFRAGEF L++TSV EEGLD+ E+DLV+ ++ +
Sbjct: 404 RFVGQGDKDGSDGMTQKEQQETLDKFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPT 463
Query: 206 PIKMVQRLGRTGRKRNGRCVILLTQ 230
++ +QR GRTGR+ G+ V+LL +
Sbjct: 464 AVRSIQRKGRTGRQAQGQVVVLLAE 488
>gi|433592991|ref|YP_007282487.1| ERCC4-like helicase [Natrinema pellirubrum DSM 15624]
gi|448335437|ref|ZP_21524582.1| Hef nuclease [Natrinema pellirubrum DSM 15624]
gi|433307771|gb|AGB33583.1| ERCC4-like helicase [Natrinema pellirubrum DSM 15624]
gi|445616961|gb|ELY70569.1| Hef nuclease [Natrinema pellirubrum DSM 15624]
Length = 813
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 96/173 (55%), Gaps = 13/173 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + D L A FVGQ
Sbjct: 355 HPKYRKTRMLLAETLGL--EGGE--RVIVFTESRDTAEALTDFLSD---SFDAKRFVGQG 407
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ EQ++++ +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 408 DREGSDGMTQTEQQDVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 467
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANLAK 263
R GRTGR+ GR V+L+ + R+ F S + K ++ + K + LA+
Sbjct: 468 RKGRTGRQSEGRVVVLMAEDTRDEAYFWISRRREKEMESELRDLKGMADELAE 520
>gi|448346947|ref|ZP_21535826.1| Hef nuclease [Natrinema altunense JCM 12890]
gi|445631284|gb|ELY84516.1| Hef nuclease [Natrinema altunense JCM 12890]
Length = 819
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + D L A FVGQ
Sbjct: 353 HPKYSKARMLLAETLGL--EGGE--RVIVFTESRDTAEALTDFLSE---SFDAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q+E++ +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQKQQQEVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+L+ +
Sbjct: 466 RKGRTGRQTEGRVVVLMAE 484
>gi|307352953|ref|YP_003894004.1| helicase domain-containing protein [Methanoplanus petrolearius DSM
11571]
gi|307156186|gb|ADN35566.1| helicase domain protein [Methanoplanus petrolearius DSM 11571]
Length = 766
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 79/127 (62%), Gaps = 7/127 (5%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
+++IIFANYR V + + LK + F+GQ+S G++Q++Q E + FR GE
Sbjct: 371 SRIIIFANYRDSVNLLDEYLKGRG--IDCKKFIGQASRDSEKGLSQKKQIETLTGFRNGE 428
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
F LIATSVGEEGLD+ DLVI ++A S I+ +QR GRTGR +G ++L+T+G
Sbjct: 429 FRVLIATSVGEEGLDVPSTDLVIFYEAVPSEIRSIQRKGRTGRHGSGSIIVLVTKGTSDE 488
Query: 236 NFQTSMQ 242
F+ Q
Sbjct: 489 TFRYVSQ 495
>gi|448401335|ref|ZP_21571571.1| Hef nuclease [Haloterrigena limicola JCM 13563]
gi|445666598|gb|ELZ19257.1| Hef nuclease [Haloterrigena limicola JCM 13563]
Length = 810
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 84/139 (60%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + D L +A FVGQ
Sbjct: 353 HPKYRKARMLLAETLGL--EGGE--RVIVFTESRDTAEALTDFLSE---SFEAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q+E++ +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQKQQQEVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+L+ +
Sbjct: 466 RKGRTGRQSEGRVVVLMAE 484
>gi|448721282|ref|ZP_21703850.1| Hef nuclease [Halobiforma nitratireducens JCM 10879]
gi|445778400|gb|EMA29349.1| Hef nuclease [Halobiforma nitratireducens JCM 10879]
Length = 808
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + D L +A FVGQ
Sbjct: 353 HPKYRKARMLLAETLGL--EDGE--RVIVFTESRDTAEALTDFLSE---SFEAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ EQ+E+++ FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQNEQQEVLEDFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ G+ V+L+ +
Sbjct: 466 RKGRTGRQSEGQVVVLMAE 484
>gi|284166979|ref|YP_003405258.1| ERCC4 domain-containing protein [Haloterrigena turkmenica DSM 5511]
gi|284016634|gb|ADB62585.1| ERCC4 domain protein [Haloterrigena turkmenica DSM 5511]
Length = 820
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + D L A FVGQ
Sbjct: 353 HPKYRKTRMLLAETLGL--EGGE--RVIVFTESRDTAEALTDFLSE---SFDAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ EQ+E++ +FR GEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQTEQQEVLDQFRGGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANL 261
R GRTGR+ GR V+L+ + R+ F S + K ++ + K + +L
Sbjct: 466 RKGRTGRQSEGRVVVLMAEDTRDEAYFWISRRREKEMESELRDLKGVADDL 516
>gi|389848441|ref|YP_006350680.1| Hef nuclease [Haloferax mediterranei ATCC 33500]
gi|448616895|ref|ZP_21665605.1| Hef nuclease [Haloferax mediterranei ATCC 33500]
gi|388245747|gb|AFK20693.1| Hef nuclease [Haloferax mediterranei ATCC 33500]
gi|445751550|gb|EMA02987.1| Hef nuclease [Haloferax mediterranei ATCC 33500]
Length = 870
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 83/143 (58%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L +H GE +VI+F R D + L + S F
Sbjct: 352 HPKFRKTRILLAETLGIH--DGE--RVIVFTESR-------DTAEALTEFLSESFSVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q+EQ+E + KFR GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDREGSDGMSQKEQQETLDKFRGGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ +GR V+LL +
Sbjct: 461 RSIQRKGRTGRQADGRVVVLLAE 483
>gi|193083757|gb|ACF09444.1| ATP-dependent RNA helicase EIF-4A family [uncultured marine group
II euryarchaeote SAT1000-15-B12]
Length = 585
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 74/115 (64%), Gaps = 6/115 (5%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
++VIIFA YR VA + LK LE + FVGQSS G++ ++Q E + +FR+G
Sbjct: 365 SRVIIFATYRDTVAVVEKSLKGLEG-ARPVQFVGQSSREGRDGLSAKQQVERLDEFRSGA 423
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
N L+ATSVGEEGLDI DLVI ++ S I+ +QR GRTGR R G V+L+ +
Sbjct: 424 ANVLVATSVGEEGLDIPSADLVIFYEPVPSEIRTIQRRGRTGRHREGEVVVLIAE 478
>gi|448611374|ref|ZP_21662008.1| Hef nuclease [Haloferax mucosum ATCC BAA-1512]
gi|445743806|gb|ELZ95287.1| Hef nuclease [Haloferax mucosum ATCC BAA-1512]
Length = 841
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 83/143 (58%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L +H GE +VI+F R D + L + S F
Sbjct: 352 HPKFRKTRILLAETLGIH--DGE--RVIVFTESR-------DTAEALTEFLSESFSVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q+EQ+E + KFR GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDREGSDGMSQKEQQETLDKFRGGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ +GR V+LL +
Sbjct: 461 RSIQRKGRTGRQADGRVVVLLAE 483
>gi|448381161|ref|ZP_21561428.1| Hef nuclease [Haloterrigena thermotolerans DSM 11522]
gi|445663513|gb|ELZ16261.1| Hef nuclease [Haloterrigena thermotolerans DSM 11522]
Length = 815
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + D L A FVGQ
Sbjct: 355 HPKYRKTRMLLAETLGL--EGGE--RVIVFTESRDTAEALTDFLSD---SFDAKRFVGQG 407
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ EQ+ ++ +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 408 DREGSDGMTQTEQQAVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 467
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANLAK 263
R GRTGR+ GR V+L+ + R+ F S + K ++ + K + LA+
Sbjct: 468 RKGRTGRQSEGRVVVLMAEDTRDEAYFWISRRREKEMESELRDLKGMADELAE 520
>gi|374628568|ref|ZP_09700953.1| helicase domain-containing protein [Methanoplanus limicola DSM
2279]
gi|373906681|gb|EHQ34785.1| helicase domain-containing protein [Methanoplanus limicola DSM
2279]
Length = 776
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 80/122 (65%), Gaps = 7/122 (5%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
+++++FAN+R V + + L + + + F+GQ+S G++Q++Q E + KFR GE
Sbjct: 373 SRILVFANFRDTVNLLSERLN--KEGFECARFIGQASRDSEKGLSQKKQIETLSKFREGE 430
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
F L+ATSVGEEGLD+ DLVI ++A S I+ +QR GRTGR +G+ ++L+T+G
Sbjct: 431 FRVLVATSVGEEGLDVPSTDLVIFYEAVPSEIRSIQRKGRTGRHGSGKIIVLITKGTTDE 490
Query: 236 NF 237
F
Sbjct: 491 TF 492
>gi|354609912|ref|ZP_09027868.1| ERCC4 domain protein [Halobacterium sp. DL1]
gi|353194732|gb|EHB60234.1| ERCC4 domain protein [Halobacterium sp. DL1]
Length = 815
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 100/181 (55%), Gaps = 13/181 (7%)
Query: 90 SSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKA 149
+ E+ H KF R R +L L E+GE +VI+F R + + L
Sbjct: 343 ADEFDGLHPKFRRARMLLAET--LGIEEGE--RVIVFTESRDTAEALTEFLGQ---HFDT 395
Query: 150 SMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
FVGQ S G+TQ+EQ+E + +FR+GEF L++TSV EEGLD+ E+DLV+ F+
Sbjct: 396 RRFVGQGDADGSDGMTQKEQRETLDEFRSGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVP 455
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANLAK 263
+ I+ VQR GRTGR+ G+ ++L+ + R+ F S + + +++ + K + LA
Sbjct: 456 TAIRSVQRKGRTGRQTEGKVIVLMAEDTRDEAYFWISRRREQEMEDELRSLKGVADELAG 515
Query: 264 N 264
+
Sbjct: 516 D 516
>gi|448364130|ref|ZP_21552724.1| Hef nuclease [Natrialba asiatica DSM 12278]
gi|445645018|gb|ELY98025.1| Hef nuclease [Natrialba asiatica DSM 12278]
Length = 834
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ R R +L L E GE +VI+F R + + L A FVGQ
Sbjct: 370 HPKYRRTRMLLAET--LGIEDGE--RVIVFTESRDTAEALTEFLAG---SCDAKRFVGQG 422
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q+E++ +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 423 DREGSDGMTQKQQQEVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 482
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+L+ +
Sbjct: 483 RKGRTGRQSEGRVVVLMAE 501
>gi|448632932|ref|ZP_21673930.1| Hef nuclease [Haloarcula vallismortis ATCC 29715]
gi|445752289|gb|EMA03713.1| Hef nuclease [Haloarcula vallismortis ATCC 29715]
Length = 837
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 26/204 (12%)
Query: 39 LENLVTY-------GLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L VTY LR ++ L E ++ G+ Q L+ + K + I +S
Sbjct: 295 LRTAVTYVETQSVESLRRYFERLKEAARSSGASKAD------QRLVSEPKVREAIRKANS 348
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
Y H KF + R +L L E GE +VI+F R + D L
Sbjct: 349 -YDDLHPKFRQTRMLLAET--LGIENGE--RVIVFTESRDTAETLVDFLSD---HFTTQK 400
Query: 152 FVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
FVGQS G+TQ +Q+E + +FR GEF L++TSV EEGLD+ E+DLV+ ++ +
Sbjct: 401 FVGQSDTDGSEGMTQTQQQETLDRFRNGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTA 460
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQ 230
I+ +QR GRTGR+ GR V+LL +
Sbjct: 461 IRAIQRKGRTGRQAEGRVVVLLAE 484
>gi|448389152|ref|ZP_21565564.1| Hef nuclease [Haloterrigena salina JCM 13891]
gi|445669056|gb|ELZ21671.1| Hef nuclease [Haloterrigena salina JCM 13891]
Length = 820
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 13/171 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + D L A FVGQ
Sbjct: 353 HPKYRKTRMLLAETLGL--EGGE--RVIVFTESRDTAEALTDFLSE---SFDAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ+EQ++++ +FR GEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQKEQQDVLDQFRGGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANL 261
R GRTGR+ GR V+L+ + R+ F S + K ++ + K + +L
Sbjct: 466 RKGRTGRQSEGRVVVLMAEDTRDEAYFWISRRREKEMESELRDLKGVADDL 516
>gi|448582933|ref|ZP_21646412.1| Hef nuclease [Haloferax gibbonsii ATCC 33959]
gi|445730387|gb|ELZ81976.1| Hef nuclease [Haloferax gibbonsii ATCC 33959]
Length = 871
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L L + GE +VI+F R D + L + S F
Sbjct: 352 HPKFRKTRILLAET--LGIQDGE--RVIVFTESR-------DTAEALTEFLSESFSVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ+EQ+E + KFR+GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDREGSDGMTQKEQQETLDKFRSGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ +GR V+LL +
Sbjct: 461 RSIQRKGRTGRQADGRVVVLLAE 483
>gi|435850474|ref|YP_007312060.1| ERCC4-like helicase [Methanomethylovorans hollandica DSM 15978]
gi|433661104|gb|AGB48530.1| ERCC4-like helicase [Methanomethylovorans hollandica DSM 15978]
Length = 750
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
++VI+F NYR + L +E + FVGQSS G+TQ++Q I++ F+ G
Sbjct: 368 SRVIVFTNYRDTADMVTASLGSMEDIYPVR-FVGQSSKYKDKGLTQKQQVHIIEDFKKGT 426
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
+N L+ATSV EEGLDI DLV+ ++ S I+ +QR GRT RK GR V+L+T+G
Sbjct: 427 YNVLVATSVAEEGLDIPSTDLVVFYEPIPSEIRSIQRKGRTARKHAGRVVVLVTKGTRDE 486
Query: 236 NFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIK 278
+ S + + ++ N K + N++ N + +V P+++
Sbjct: 487 GYYWSSLSKERRMQS--NMKELQENMSANATTL-EQYVQPQVE 526
>gi|219851698|ref|YP_002466130.1| Hef nuclease [Methanosphaerula palustris E1-9c]
gi|219545957|gb|ACL16407.1| DEAD/DEAH box helicase domain protein [Methanosphaerula palustris
E1-9c]
Length = 754
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 90/152 (59%), Gaps = 11/152 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K + E+++ H E +++I+FA +R V ++ + L + +++ FVGQ+
Sbjct: 351 HPKVGLVGELVQKQLLEHPE----SRIIVFATFRDTVQQLVNHLADIG--IESERFVGQA 404
Query: 157 S-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
G+TQ++Q +++FR GEF LIATSVGEEGLD+ DLVI ++A S I+ +Q
Sbjct: 405 KKDSEKGLTQKKQIAALQRFRDGEFRVLIATSVGEEGLDVPSTDLVIFYEAVPSEIRSIQ 464
Query: 212 RLGRTGRKRNGRCVILLTQGREAHNFQTSMQT 243
R GRTGR G ++L+T+G + F+ Q
Sbjct: 465 RKGRTGRSGEGSIIVLVTKGTQDETFRYVSQA 496
>gi|448330470|ref|ZP_21519751.1| Hef nuclease [Natrinema versiforme JCM 10478]
gi|445611517|gb|ELY65266.1| Hef nuclease [Natrinema versiforme JCM 10478]
Length = 815
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E G+ +VI+F R + D L A FVGQ
Sbjct: 353 HPKYSKARMLLAETLGL--EGGD--RVIVFTESRDTAEALTDFLSE---SFDAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q+E++ +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQKQQQEVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+L+ +
Sbjct: 466 RKGRTGRQSEGRVVVLMAE 484
>gi|448560390|ref|ZP_21633838.1| Hef nuclease [Haloferax prahovense DSM 18310]
gi|445722040|gb|ELZ73703.1| Hef nuclease [Haloferax prahovense DSM 18310]
Length = 864
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L L + GE +VI+F R D + L + S F
Sbjct: 352 HPKFRKTRILLAET--LGIQDGE--RVIVFTESR-------DTAEALTEFLSESFSVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ EQ+E + KFR+GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDREGSDGMTQNEQQETLDKFRSGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ +GR V+LL +
Sbjct: 461 RSIQRKGRTGRQADGRVVVLLAE 483
>gi|448732248|ref|ZP_21714529.1| Hef nuclease [Halococcus salifodinae DSM 8989]
gi|445804821|gb|EMA55051.1| Hef nuclease [Halococcus salifodinae DSM 8989]
Length = 816
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H KF R R +L L E GE +VI+F R + D L FVGQ
Sbjct: 351 HPKFRRARILLAQT--LGIEDGE--RVIVFTESRDTAETLTDFLGE---HFSTRKFVGQG 403
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ+EQ+E + +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 404 DKEGSDGMTQKEQQETLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 463
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR ++LL +
Sbjct: 464 RKGRTGRQTEGRVMVLLAE 482
>gi|448315775|ref|ZP_21505414.1| Hef nuclease [Natronococcus jeotgali DSM 18795]
gi|445610534|gb|ELY64304.1| Hef nuclease [Natronococcus jeotgali DSM 18795]
Length = 814
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E G+ +VI+F R + D L A FVGQ
Sbjct: 355 HPKYRKSRMLLAETLGL--EGGD--RVIVFTESRDTAEALTDFLSE---SFDAKRFVGQG 407
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ+EQ+E++ FR GEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 408 DREGSDGMTQKEQQEVLDAFRGGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 467
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+LL +
Sbjct: 468 RKGRTGRQSEGRVVVLLAE 486
>gi|344213340|ref|YP_004797660.1| Hef nuclease/ATP-dependent RNA helicase-like protein eIF-4A
[Haloarcula hispanica ATCC 33960]
gi|343784695|gb|AEM58672.1| Hef nuclease / ATP-dependent RNA helicase-like protein eIF-4A
[Haloarcula hispanica ATCC 33960]
Length = 836
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 26/204 (12%)
Query: 39 LENLVTY-------GLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L VTY LR ++ L E ++ G+ Q L+ + K + + +S
Sbjct: 295 LRTAVTYVETQSVESLRRYFERLKEAARSSGASKAD------QRLVSEPKVREAMR-KAS 347
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
+Y H KF + R +L L E GE +VI+F R + D L
Sbjct: 348 DYDDLHPKFRQTRMLLAET--LGIENGE--RVIVFTESRDTAETLVDFLSD---HFTTQK 400
Query: 152 FVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
FVGQS G++Q +Q+E + +FR GEF L++TSV EEGLD+ E+DLV+ ++ +
Sbjct: 401 FVGQSDTDGSEGMSQSQQQETLDRFRDGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTA 460
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQ 230
I+ +QR GRTGR+ GR V+LL +
Sbjct: 461 IRAIQRKGRTGRQAEGRVVVLLAE 484
>gi|448664269|ref|ZP_21684072.1| Hef nuclease [Haloarcula amylolytica JCM 13557]
gi|445774914|gb|EMA25928.1| Hef nuclease [Haloarcula amylolytica JCM 13557]
Length = 845
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 26/204 (12%)
Query: 39 LENLVTY-------GLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L VTY LR ++ L E ++ G+ Q L+ + K + + +S
Sbjct: 295 LRTAVTYVETQSVESLRRYFERLKEAARSSGASKAD------QRLVSEPKVREAMR-KAS 347
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
+Y H KF + R +L L E GE +VI+F R + D L
Sbjct: 348 DYDDLHPKFRQTRMLLAE--TLGIENGE--RVIVFTESRDTAETLVDFLSD---HFTTQK 400
Query: 152 FVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
FVGQS G++Q +Q+E + +FR GEF L++TSV EEGLD+ E+DLV+ ++ +
Sbjct: 401 FVGQSDTDGSEGMSQSQQQETLDRFRDGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTA 460
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQ 230
I+ +QR GRTGR+ GR V+LL +
Sbjct: 461 IRAIQRKGRTGRQAEGRVVVLLAE 484
>gi|329765288|ref|ZP_08256868.1| DEAD/DEAH box helicase domain-containing protein [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329138194|gb|EGG42450.1| DEAD/DEAH box helicase domain-containing protein [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 505
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 84/136 (61%), Gaps = 13/136 (9%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K ++L+EI+ES K +IF +YR V IF+ K E + A++ +G+S
Sbjct: 335 HSKILKLKEIIESV---------PGKALIFTSYRDSVDVIFN--KLTEMGISAAILIGKS 383
Query: 157 --SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLG 214
+G+ Q++Q E ++ FR G F L+AT VGEEGLDI E++ VI +D S I+ VQR G
Sbjct: 384 GDTGLKQKKQIETVQNFRDGLFRVLVATRVGEEGLDISEVNQVIFYDNVPSSIRFVQRRG 443
Query: 215 RTGRKRNGRCVILLTQ 230
RTGRK G+ V+L+ +
Sbjct: 444 RTGRKDTGKLVVLIAK 459
>gi|300709530|ref|YP_003735344.1| Hef nuclease [Halalkalicoccus jeotgali B3]
gi|448297701|ref|ZP_21487744.1| Hef nuclease [Halalkalicoccus jeotgali B3]
gi|299123213|gb|ADJ13552.1| Hef nuclease [Halalkalicoccus jeotgali B3]
gi|445578571|gb|ELY32974.1| Hef nuclease [Halalkalicoccus jeotgali B3]
Length = 799
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEF 176
+VI+F YR + + L V FVGQ SSG+TQ+EQKE++ FR GEF
Sbjct: 373 RVIVFTEYRDTAETLTEFLGE---HVDTRRFVGQGDKEGSSGMTQKEQKEVLDDFRKGEF 429
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
L++TSV EEGLD+ E+DLV+ ++ + I+ +QR GRTGR+ G+ V+LL +
Sbjct: 430 EVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRAIQRKGRTGRQDEGQVVVLLAE 483
>gi|393795773|ref|ZP_10379137.1| DEAD/DEAH box helicase [Candidatus Nitrosoarchaeum limnia BG20]
Length = 505
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 84/136 (61%), Gaps = 13/136 (9%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K ++L+EI+ES K +IF +YR V IF+ K E + A++ +G+S
Sbjct: 335 HSKILKLKEIIESV---------PGKALIFTSYRDSVDVIFN--KLTEMGISAAILIGKS 383
Query: 157 --SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLG 214
+G+ Q++Q E ++ FR G F L+AT VGEEGLDI E++ VI +D S I+ VQR G
Sbjct: 384 GDTGLKQKKQIETVQNFRDGLFRVLVATRVGEEGLDISEVNQVIFYDNVPSSIRFVQRRG 443
Query: 215 RTGRKRNGRCVILLTQ 230
RTGRK G+ V+L+ +
Sbjct: 444 RTGRKDTGKLVVLIAK 459
>gi|448655325|ref|ZP_21682177.1| Hef nuclease [Haloarcula californiae ATCC 33799]
gi|445765774|gb|EMA16912.1| Hef nuclease [Haloarcula californiae ATCC 33799]
Length = 851
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 28/205 (13%)
Query: 39 LENLVTY-------GLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L VTY LR ++ L E ++ G+ Q L+ + PK+ + +
Sbjct: 295 LRTAVTYVETQSVESLRRYFERLKEAARSSGASKAD------QRLVSE--PKVREAMRKA 346
Query: 92 E-YAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
E Y H KF + R +L L E GE +VI+F R + D L
Sbjct: 347 ESYNDLHPKFRQTRMLLAET--LGIENGE--RVIVFTESRDTAETLVDFLSD---HFTTQ 399
Query: 151 MFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKS 205
FVGQS G+TQ +Q+E + +FR GEF L++TSV EEGLD+ E+DLV+ ++ +
Sbjct: 400 KFVGQSDTDGSEGMTQTQQQETLDRFRNGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPT 459
Query: 206 PIKMVQRLGRTGRKRNGRCVILLTQ 230
I+ +QR GRTGR+ GR V+LL +
Sbjct: 460 AIRAIQRKGRTGRQAEGRVVVLLAE 484
>gi|448320786|ref|ZP_21510271.1| Hef nuclease [Natronococcus amylolyticus DSM 10524]
gi|445605213|gb|ELY59143.1| Hef nuclease [Natronococcus amylolyticus DSM 10524]
Length = 818
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E G+ +VI+F R + D L A FVGQ
Sbjct: 355 HPKYRKTRMLLAETLGL--EGGD--RVIVFTESRDTAEALTDFLNE---SFDAKRFVGQG 407
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ EQ+E++ FR GEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 408 DREGSDGMTQTEQQEVLDAFRGGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 467
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+LL +
Sbjct: 468 RKGRTGRQSEGRVVVLLAE 486
>gi|448683610|ref|ZP_21692327.1| Hef nuclease [Haloarcula japonica DSM 6131]
gi|445783749|gb|EMA34574.1| Hef nuclease [Haloarcula japonica DSM 6131]
Length = 832
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 28/205 (13%)
Query: 39 LENLVTY-------GLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L VTY LR ++ L E ++ G+ Q L+ + PK+ + +
Sbjct: 295 LRTAVTYVETQSVESLRRYFERLKEAARSSGASKAD------QRLVSE--PKVREAMRKA 346
Query: 92 E-YAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
E Y H KF + R +L L E GE +VI+F R + D L
Sbjct: 347 ESYDDLHPKFRQTRMLLAET--LGIENGE--RVIVFTESRDTAETLVDFLSD---HFTTQ 399
Query: 151 MFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKS 205
FVGQS G+TQ +Q+E + +FR GEF L++TSV EEGLD+ E+DLV+ ++ +
Sbjct: 400 KFVGQSDTDGSEGMTQTQQQETLDRFRNGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPT 459
Query: 206 PIKMVQRLGRTGRKRNGRCVILLTQ 230
I+ +QR GRTGR+ GR V+LL +
Sbjct: 460 AIRAIQRKGRTGRQAEGRVVVLLAE 484
>gi|448605289|ref|ZP_21657964.1| Hef nuclease [Haloferax sulfurifontis ATCC BAA-897]
gi|445742813|gb|ELZ94306.1| Hef nuclease [Haloferax sulfurifontis ATCC BAA-897]
Length = 854
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L L + GE +VI+F R D + L + S F
Sbjct: 352 HPKFRKTRILLAET--LGIQDGE--RVIVFTESR-------DTAEALTEFLSESFSVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ EQ+E + KFR+GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDREGSDGMTQNEQQETLDKFRSGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ +GR V+LL +
Sbjct: 461 RSIQRKGRTGRQADGRVVVLLAE 483
>gi|448680086|ref|ZP_21690525.1| Hef nuclease [Haloarcula argentinensis DSM 12282]
gi|445769734|gb|EMA20807.1| Hef nuclease [Haloarcula argentinensis DSM 12282]
Length = 839
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 28/205 (13%)
Query: 39 LENLVTY-------GLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L VTY LR ++ L E ++ G+ Q L+ + PK+ + +
Sbjct: 295 LRTAVTYVETQSVESLRRYFERLKEAARSSGASKAD------QRLVSE--PKVREAMRKA 346
Query: 92 E-YAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
E Y H KF + R +L L E GE +VI+F R + D L
Sbjct: 347 ESYDDLHPKFRQTRMLLAET--LGIENGE--RVIVFTESRDTAETLVDFLSD---HFTTQ 399
Query: 151 MFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKS 205
FVGQS G+TQ +Q+E + +FR GEF L++TSV EEGLD+ E+DLV+ ++ +
Sbjct: 400 KFVGQSDTDGSEGMTQTQQQETLDRFRNGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPT 459
Query: 206 PIKMVQRLGRTGRKRNGRCVILLTQ 230
I+ +QR GRTGR+ GR V+LL +
Sbjct: 460 AIRAIQRKGRTGRQAEGRVVVLLAE 484
>gi|448417002|ref|ZP_21579105.1| Hef nuclease [Halosarcina pallida JCM 14848]
gi|445678685|gb|ELZ31173.1| Hef nuclease [Halosarcina pallida JCM 14848]
Length = 838
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF R R +L L E G+ +VI+F R D + L + AS F
Sbjct: 352 HPKFSRTRILLAQT--LGIEGGQ--RVIVFTESR-------DTAEALTDFLSASFDVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ+EQ+E + +FR GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDKDGSDGMTQKEQQETLNEFRNGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ GR V+L+ +
Sbjct: 461 RSIQRKGRTGRQAEGRVVVLMAE 483
>gi|448638549|ref|ZP_21676399.1| Hef nuclease [Haloarcula sinaiiensis ATCC 33800]
gi|445763328|gb|EMA14527.1| Hef nuclease [Haloarcula sinaiiensis ATCC 33800]
Length = 836
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 28/205 (13%)
Query: 39 LENLVTY-------GLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L VTY LR ++ L E ++ G+ Q L+ + PK+ + +
Sbjct: 295 LRTAVTYVETQSVESLRRYFERLKEAARSSGASKAD------QRLVSE--PKVREAMRKA 346
Query: 92 E-YAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
E Y H KF + R +L L E GE +VI+F R + D L
Sbjct: 347 ESYNDLHPKFRQTRMLLAET--LGIENGE--RVIVFTESRDTAETLVDFLSD---HFTTQ 399
Query: 151 MFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKS 205
FVGQS G+TQ +Q+E + +FR GEF L++TSV EEGLD+ E+DLV+ ++ +
Sbjct: 400 KFVGQSDTDGSEGMTQTQQQETLDRFRNGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPT 459
Query: 206 PIKMVQRLGRTGRKRNGRCVILLTQ 230
I+ +QR GRTGR+ GR V+LL +
Sbjct: 460 AIRAIQRKGRTGRQAEGRVVVLLAE 484
>gi|288561345|ref|YP_003424831.1| Hef nuclease [Methanobrevibacter ruminantium M1]
gi|288544055|gb|ADC47939.1| Hef nuclease [Methanobrevibacter ruminantium M1]
Length = 842
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 85/132 (64%), Gaps = 8/132 (6%)
Query: 117 KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKF 171
K ++ K+I+F +R + I + + +K+ F GQ + G+TQ+EQK+I+K F
Sbjct: 384 KEDSPKIIVFTQFRDTLDMIHERCE--REGIKSVRFFGQGTSDGKKGLTQKEQKKIIKSF 441
Query: 172 RAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ- 230
+ G ++ LI+TSV EEG+DI +DLVI ++ S ++M+QR GRTGRK +GR +L+T+
Sbjct: 442 KTGNYDVLISTSVAEEGIDIPAVDLVIMYEPVPSEVRMIQRRGRTGRKSSGRMKVLITEK 501
Query: 231 GREAHNFQTSMQ 242
R+ + TSM+
Sbjct: 502 TRDEGYYWTSMR 513
>gi|386875459|ref|ZP_10117630.1| DEAD/DEAH box helicase [Candidatus Nitrosopumilus salaria BD31]
gi|386806739|gb|EIJ66187.1| DEAD/DEAH box helicase [Candidatus Nitrosopumilus salaria BD31]
Length = 468
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 17/163 (10%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K +L+EILES K +IF +YR V I++ L E + A + +G++
Sbjct: 298 HSKIPKLKEILES---------VPGKALIFTSYRDSVDLIYNKLT--EQGISAGILIGKA 346
Query: 157 --SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLG 214
+G+ Q++Q EI++KFR G F LIAT VGEEGLDI E++ VI +D S ++ +QR G
Sbjct: 347 GEAGLKQKKQIEIVQKFRDGLFRVLIATRVGEEGLDIAEVNQVIFYDNVPSSVRYIQRRG 406
Query: 215 RTGRKRNGRCVILLTQGREAHNF----QTSMQTCKSYVEKIIN 253
RTGRK G+ V+L+ + + + M + KS +K+ N
Sbjct: 407 RTGRKDTGKLVVLIAKNTIDETYYWIGKRKMTSAKSMGDKMTN 449
>gi|424814351|ref|ZP_18239529.1| ERCC4-like helicase [Candidatus Nanosalina sp. J07AB43]
gi|339757967|gb|EGQ43224.1| ERCC4-like helicase [Candidatus Nanosalina sp. J07AB43]
Length = 730
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 115/224 (51%), Gaps = 25/224 (11%)
Query: 35 LASALENLVTYGLRSFYNNLVEVSKEDGSCPILG-KDNDLQ---NLLQQLKPKLDINIMS 90
++ A+E L T G+ + + + +D ++ND+Q NL++ LK +
Sbjct: 277 ISQAVELLETQGVSQCFEYIDGLENDDSKAASRALENNDMQKARNLIKYLKTE------- 329
Query: 91 SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
H K + EILE E K ++F YR V I + L+ + + A+
Sbjct: 330 ---GEEHPKLEKTVEILEGL-------EEDGKALVFTEYRSSVENITERLR--QEDIHAT 377
Query: 151 MFVGQSS--GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
F+GQS G+TQ++Q E++ +FR GE +++TS+GEEGLDI +D V+ ++ S ++
Sbjct: 378 RFIGQSGDQGMTQKQQIELLDEFRDGEHQVVVSTSIGEEGLDIPAVDYVVFYEPVPSSVR 437
Query: 209 MVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKII 252
+QR GRTGR+ +G +L+ + + S Q K + K++
Sbjct: 438 SIQRAGRTGRQESGEVYVLIAENTRDEGYYWSAQHKKKNMNKVL 481
>gi|106364397|dbj|BAE95223.1| ATP-dependent RNA helicase [unclutured Candidatus Nitrosocaldus
sp.]
Length = 589
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 90/144 (62%), Gaps = 11/144 (7%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS--GVTQQEQKEIMKKFRAGEFNTL 179
K +IF +YR V I L + K +G++ G+ Q+EQ E++++FRAGE++ L
Sbjct: 411 KALIFTSYRDSVEVITSRL--IAEGFKVGYLIGKTGEYGLRQEEQVEVVERFRAGEYSIL 468
Query: 180 IATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGR--EAHNF 237
+ATSVGEEGLDI E +LVI +D S I+ VQR GRTGR+ G+ ++L+ + EA+++
Sbjct: 469 VATSVGEEGLDIAECNLVIFYDNVPSAIRFVQRKGRTGRRMPGKVIVLVAKDTIDEAYHW 528
Query: 238 QT-----SMQTCKSYVEKIINNKS 256
+ +++ S V +II N+S
Sbjct: 529 ISRKKVRQVRSIVSIVNRIIANRS 552
>gi|448304069|ref|ZP_21494014.1| Hef nuclease [Natronorubrum sulfidifaciens JCM 14089]
gi|445592156|gb|ELY46348.1| Hef nuclease [Natronorubrum sulfidifaciens JCM 14089]
Length = 811
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 13/173 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VIIF R + + L A FVGQ
Sbjct: 353 HPKYRKTRMLLAETLGL--EGGE--RVIIFTESRDTAEALTEFLSE---SFDAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ+EQ+ ++ +FRA EF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQKEQQAVLDEFRAAEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANLAK 263
R GRTGR+ GR V+L+ + R+ F S + K ++ + K + ++L K
Sbjct: 466 RKGRTGRQSEGRVVVLMAEDTRDEAYFWISQRREKEMESELRDLKGVASDLEK 518
>gi|55379328|ref|YP_137178.1| Hef nuclease [Haloarcula marismortui ATCC 43049]
gi|55232053|gb|AAV47472.1| ATP-dependent RNA helicase homolog eIF-4A [Haloarcula marismortui
ATCC 43049]
Length = 852
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 28/205 (13%)
Query: 39 LENLVTY-------GLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSS 91
L VTY LR ++ L E ++ G+ Q L+ + PK+ + +
Sbjct: 295 LRTAVTYVETQSVESLRRYFERLKEAARSSGASKAD------QRLVSE--PKVREAMRKA 346
Query: 92 E-YAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
E Y H KF + R +L L E GE +VI+F R + D L
Sbjct: 347 ESYNDLHPKFRQTRMLLAET--LGIENGE--RVIVFTESRDTAETLVDFLSD---HFTTQ 399
Query: 151 MFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKS 205
FVGQS G+TQ +Q+E + +FR GEF L++TSV EEGLD+ E+DLV+ ++ +
Sbjct: 400 KFVGQSDTDGSEGMTQTQQQETLDRFRNGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPT 459
Query: 206 PIKMVQRLGRTGRKRNGRCVILLTQ 230
I+ +QR GRTGR+ GR V+LL +
Sbjct: 460 AIRAIQRKGRTGRQAEGRVVVLLAE 484
>gi|154150356|ref|YP_001403974.1| Hef nuclease [Methanoregula boonei 6A8]
gi|153998908|gb|ABS55331.1| helicase domain protein [Methanoregula boonei 6A8]
Length = 745
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 81/135 (60%), Gaps = 7/135 (5%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
+++IIFA +R V + D L + + FVGQ++ G++Q+ Q + +FRAGE
Sbjct: 373 SRIIIFATFRDTVQLLVDYLT--KNGISCERFVGQATKDAEKGLSQKRQIAALARFRAGE 430
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
F L+ATSVGEEGLD+ DLVI ++ S I+ +QR GRTGR GR V+L T+G
Sbjct: 431 FKVLVATSVGEEGLDVPSTDLVIFYEPVPSEIRSIQRKGRTGRSGAGRVVVLATKGTSDD 490
Query: 236 NFQTSMQTCKSYVEK 250
++ QT + ++K
Sbjct: 491 VYRYVSQTKERQMQK 505
>gi|408404564|ref|YP_006862547.1| ATP-dependent RNA helicase [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408365160|gb|AFU58890.1| putative ATP-dependent RNA helicase [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 740
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 70/112 (62%), Gaps = 8/112 (7%)
Query: 122 KVIIFANYRVVVAEIFD-VLKPLEPMVKASMFVGQS-----SGVTQQEQKEIMKKFRAGE 175
+V++F YR I D VL +KAS FVGQ+ G+ Q EQ +++ FR GE
Sbjct: 381 RVLVFTQYRDTARHIVDDVLSS--TGIKASRFVGQAKRQGDEGMNQDEQAAVLQSFREGE 438
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
F+ L+ATS+ EEGLDI E+DLV+ ++ S I+ +QR GRTGRK G VIL
Sbjct: 439 FDVLVATSIAEEGLDIPEVDLVVFYEPVPSEIRYIQRRGRTGRKAAGSVVIL 490
>gi|300521552|gb|ADK25987.1| ERRC4-type helicase [Candidatus Nitrososphaera gargensis]
Length = 740
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 70/112 (62%), Gaps = 8/112 (7%)
Query: 122 KVIIFANYRVVVAEIFD-VLKPLEPMVKASMFVGQS-----SGVTQQEQKEIMKKFRAGE 175
+V++F YR I D VL +KAS FVGQ+ G+ Q EQ +++ FR GE
Sbjct: 381 RVLVFTQYRDTARHIVDDVLSS--TGIKASRFVGQAKRQGDEGMNQDEQAAVLQSFREGE 438
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
F+ L+ATS+ EEGLDI E+DLV+ ++ S I+ +QR GRTGRK G VIL
Sbjct: 439 FDVLVATSIAEEGLDIPEVDLVVFYEPVPSEIRYIQRRGRTGRKAAGSVVIL 490
>gi|448366932|ref|ZP_21554963.1| Hef nuclease [Natrialba aegyptia DSM 13077]
gi|445653841|gb|ELZ06701.1| Hef nuclease [Natrialba aegyptia DSM 13077]
Length = 834
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + + L A FVGQ
Sbjct: 370 HPKYRKTRMLLAET--LGIEDGE--RVIVFTESRDTAEALTEFLAE---SCDAKRFVGQG 422
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q+E++ +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 423 DREGSDGMTQKQQQEVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 482
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+L+ +
Sbjct: 483 RKGRTGRQSEGRVVVLMAE 501
>gi|435849257|ref|YP_007311507.1| ERCC4-like helicase [Natronococcus occultus SP4]
gi|433675525|gb|AGB39717.1| ERCC4-like helicase [Natronococcus occultus SP4]
Length = 814
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + + L A FVGQ
Sbjct: 355 HPKYRKSRMLLAETLGL--EDGE--RVIVFTESRDTAEALTEFLSE---SFDAKRFVGQG 407
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ+EQ+E++ FRAG+F L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 408 DREGSDGMTQKEQQEVLDAFRAGKFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 467
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+LL +
Sbjct: 468 RKGRTGRQSEGRVVVLLAE 486
>gi|448307318|ref|ZP_21497216.1| Hef nuclease [Natronorubrum bangense JCM 10635]
gi|445595986|gb|ELY50083.1| Hef nuclease [Natronorubrum bangense JCM 10635]
Length = 810
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VIIF R + + L A FVGQ
Sbjct: 353 HPKYRKTRMLLAETLGL--EGGE--RVIIFTESRDTAEALTEFLSE---SFDAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q+ ++ FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQKQQQAVLDDFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANLAK 263
R GRTGR+ GR V+L+ + R+ F S + K ++ + K + +L K
Sbjct: 466 RKGRTGRQSEGRVVVLMAEDTRDEAYFWISQRREKEMESELRDLKGVADDLEK 518
>gi|448351177|ref|ZP_21539986.1| Hef nuclease [Natrialba taiwanensis DSM 12281]
gi|445634861|gb|ELY88035.1| Hef nuclease [Natrialba taiwanensis DSM 12281]
Length = 834
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + + L A FVGQ
Sbjct: 370 HPKYRKTRMLLAET--LGIEDGE--RVIVFTESRDTAEALTEFLAE---SCDAKRFVGQG 422
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q+E++ +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 423 DREGSDGMTQKQQQEVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 482
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+L+ +
Sbjct: 483 RKGRTGRQSEGRVVVLMAE 501
>gi|448337408|ref|ZP_21526486.1| Hef nuclease [Natrinema pallidum DSM 3751]
gi|445625583|gb|ELY78939.1| Hef nuclease [Natrinema pallidum DSM 3751]
Length = 815
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 81/139 (58%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ R R +L L E GE +VI+F R + D L FVGQ
Sbjct: 353 HPKYRRARVLLAETLGL--EGGE--RVIVFTESRDTAEALTDFLSD---SFDTKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q+ ++ +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQKQQQAVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+L+ +
Sbjct: 466 RKGRTGRQTEGRVVVLMAE 484
>gi|292657118|ref|YP_003537015.1| ATP-dependent RNA helicase/nuclease Hef [Haloferax volcanii DS2]
gi|448293719|ref|ZP_21483822.1| Hef nuclease [Haloferax volcanii DS2]
gi|291371263|gb|ADE03490.1| ATP-dependent RNA helicase/nuclease Hef [Haloferax volcanii DS2]
gi|445569640|gb|ELY24211.1| Hef nuclease [Haloferax volcanii DS2]
Length = 858
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L L + GE +VI+F R D + L + S F
Sbjct: 352 HPKFRKTRILLAET--LGIQNGE--RVIVFTESR-------DTAEALTEFLSESFSVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ EQ+E + KFR GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDREGSDGMTQNEQQETLDKFRNGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ +GR V+LL +
Sbjct: 461 RSIQRKGRTGRQADGRVVVLLAE 483
>gi|448544236|ref|ZP_21625549.1| Hef nuclease [Haloferax sp. ATCC BAA-646]
gi|448551248|ref|ZP_21629390.1| Hef nuclease [Haloferax sp. ATCC BAA-645]
gi|448558259|ref|ZP_21632933.1| Hef nuclease [Haloferax sp. ATCC BAA-644]
gi|445705740|gb|ELZ57633.1| Hef nuclease [Haloferax sp. ATCC BAA-646]
gi|445710804|gb|ELZ62602.1| Hef nuclease [Haloferax sp. ATCC BAA-645]
gi|445713147|gb|ELZ64926.1| Hef nuclease [Haloferax sp. ATCC BAA-644]
Length = 845
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L L + GE +VI+F R D + L + S F
Sbjct: 352 HPKFRKTRILLAET--LGIQNGE--RVIVFTESR-------DTAEALTEFLSESFSVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ EQ+E + KFR GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDREGSDGMTQNEQQETLDKFRNGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ +GR V+LL +
Sbjct: 461 RSIQRKGRTGRQADGRVVVLLAE 483
>gi|448573743|ref|ZP_21641226.1| Hef nuclease [Haloferax lucentense DSM 14919]
gi|445718649|gb|ELZ70339.1| Hef nuclease [Haloferax lucentense DSM 14919]
Length = 855
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L L + GE +VI+F R D + L + S F
Sbjct: 352 HPKFRKTRILLAET--LGIQNGE--RVIVFTESR-------DTAEALTEFLSESFSVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ EQ+E + KFR GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDREGSDGMTQNEQQETLDKFRNGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ +GR V+LL +
Sbjct: 461 RSIQRKGRTGRQADGRVVVLLAE 483
>gi|448622213|ref|ZP_21668907.1| Hef nuclease [Haloferax denitrificans ATCC 35960]
gi|445754295|gb|EMA05700.1| Hef nuclease [Haloferax denitrificans ATCC 35960]
Length = 857
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L L + GE +VI+F R D + L + S F
Sbjct: 352 HPKFRKTRILLAET--LGIQNGE--RVIVFTESR-------DTAEALTEFLSESFSVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ EQ+E + KFR GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDREGSDGMTQNEQQETLDKFRNGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ +GR V+LL +
Sbjct: 461 RSIQRKGRTGRQADGRVVVLLAE 483
>gi|448597893|ref|ZP_21654818.1| Hef nuclease, partial [Haloferax alexandrinus JCM 10717]
gi|445739354|gb|ELZ90863.1| Hef nuclease, partial [Haloferax alexandrinus JCM 10717]
Length = 862
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L L + GE +VI+F R D + L + S F
Sbjct: 352 HPKFRKTRILLAET--LGIQNGE--RVIVFTESR-------DTAEALTEFLSESFSVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ EQ+E + KFR GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDREGSDGMTQNEQQETLDKFRNGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ +GR V+LL +
Sbjct: 461 RSIQRKGRTGRQADGRVVVLLAE 483
>gi|313125011|ref|YP_004035275.1| ercc4-like helicase [Halogeometricum borinquense DSM 11551]
gi|448287417|ref|ZP_21478629.1| Hef nuclease [Halogeometricum borinquense DSM 11551]
gi|312291376|gb|ADQ65836.1| ERCC4-like helicase [Halogeometricum borinquense DSM 11551]
gi|445572297|gb|ELY26838.1| Hef nuclease [Halogeometricum borinquense DSM 11551]
Length = 843
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H KF + R +L L + GE +VI+F R + D L A FVGQ
Sbjct: 352 HPKFSQTRILLAQT--LGIQDGE--RVIVFTESRDTAEALTDFLSE---SFDARRFVGQG 404
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ+EQ+E + +FR GEF L++TSV EEGLD+ E+DLV+ F+ + I+ +Q
Sbjct: 405 DKEGSDGMTQKEQQETLDEFRNGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAIRSIQ 464
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR ++L+ +
Sbjct: 465 RKGRTGRQAEGRVIVLMAE 483
>gi|335438600|ref|ZP_08561337.1| Hef nuclease [Halorhabdus tiamatea SARL4B]
gi|334891007|gb|EGM29264.1| Hef nuclease [Halorhabdus tiamatea SARL4B]
Length = 834
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 13/171 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H KF R R + +H GE +VI+F R + D L + K FVGQS
Sbjct: 353 HPKFRRTRMQIAETLGIH--DGE--RVIVFTESRDTAETLTDFLAEHFTVEK---FVGQS 405
Query: 157 S-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
G+TQ EQ+E ++ FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DTDGSDGMTQTEQQETLEAFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANL 261
R GRTGR+ G V+L+ + R+ F + Q K E++ K + ++
Sbjct: 466 RKGRTGRQTEGAVVVLIAEDTRDEAYFWKARQDEKRMEEELRTLKEMAGDI 516
>gi|448357031|ref|ZP_21545738.1| Hef nuclease [Natrialba chahannaoensis JCM 10990]
gi|445650204|gb|ELZ03130.1| Hef nuclease [Natrialba chahannaoensis JCM 10990]
Length = 835
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 96/173 (55%), Gaps = 13/173 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R AE L A FVGQ
Sbjct: 353 HPKYRKTRMLLAETLGL--EGGE--RVIVFTESRDT-AEALTAF--LSDSFDAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q+E++ +FRA EF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQKQQQEVLDEFRAAEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANLAK 263
R GRTGR+ GR V+L+ + R+ F S + K ++ K + +LA+
Sbjct: 466 RKGRTGRQSEGRVVVLMAEDTRDEAYFWISRRREKEMESELRELKGMADDLAE 518
>gi|289581647|ref|YP_003480113.1| helicase [Natrialba magadii ATCC 43099]
gi|448282943|ref|ZP_21474225.1| Hef nuclease [Natrialba magadii ATCC 43099]
gi|289531200|gb|ADD05551.1| helicase domain protein [Natrialba magadii ATCC 43099]
gi|445575558|gb|ELY30033.1| Hef nuclease [Natrialba magadii ATCC 43099]
Length = 829
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 96/173 (55%), Gaps = 13/173 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R AE L A FVGQ
Sbjct: 353 HPKYRKTRMLLAETLGL--EGGE--RVIVFTESRDT-AEALTAF--LSDSFDAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q+E++ +FRA EF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQKQQQEVLDEFRAAEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANLAK 263
R GRTGR+ GR V+L+ + R+ F S + K ++ K + +LA+
Sbjct: 466 RKGRTGRQSEGRVVVLMAEDTRDEAYFWISRRREKEMESELRELKGMADDLAE 518
>gi|433438864|ref|ZP_20408396.1| Hef nuclease, partial [Haloferax sp. BAB2207]
gi|432189197|gb|ELK46322.1| Hef nuclease, partial [Haloferax sp. BAB2207]
Length = 504
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L L + GE +VI+F R D + L + S F
Sbjct: 352 HPKFRKTRILLAET--LGIQNGE--RVIVFTESR-------DTAEALTEFLSESFSVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ EQ+E + KFR GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDREGSDGMTQNEQQETLDKFRNGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ +GR V+LL +
Sbjct: 461 RSIQRKGRTGRQADGRVVVLLAE 483
>gi|433640051|ref|YP_007285811.1| ERCC4-like helicase [Halovivax ruber XH-70]
gi|433291855|gb|AGB17678.1| ERCC4-like helicase [Halovivax ruber XH-70]
Length = 819
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + + L A FVGQ
Sbjct: 353 HPKYAKTRMLLAETLGL--EGGE--RVIVFTESRDTAEALTEFLSE---SFDARRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ EQ++ ++ FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQTEQQDALEAFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR +L+ +
Sbjct: 466 RKGRTGRQSEGRVAVLMAE 484
>gi|448354594|ref|ZP_21543350.1| Hef nuclease [Natrialba hulunbeirensis JCM 10989]
gi|445637482|gb|ELY90632.1| Hef nuclease [Natrialba hulunbeirensis JCM 10989]
Length = 833
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R AE L A FVGQ
Sbjct: 353 HPKYRKTRMLLAETLGL--EGGE--RVIVFTESRDT-AEALTAF--LSDSFDAKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q+E++ +FRA EF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQKQQQEVLDEFRAAEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANLA 262
R GRTGR+ GR V+L+ + R+ F S + K ++ K + +LA
Sbjct: 466 RKGRTGRQSEGRVVVLMAEDTRDEAYFWISRRREKEMESELRELKGMADDLA 517
>gi|409723155|ref|ZP_11270483.1| Hef nuclease [Halococcus hamelinensis 100A6]
gi|448722439|ref|ZP_21704974.1| Hef nuclease [Halococcus hamelinensis 100A6]
gi|445789439|gb|EMA40124.1| Hef nuclease [Halococcus hamelinensis 100A6]
Length = 827
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 101/202 (50%), Gaps = 30/202 (14%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF R R +L L E GE +VI+F R D + L + A F
Sbjct: 353 HPKFRRTRILLAQC--LGIEGGE--RVIVFTESR-------DTAETLTEFLGAHFETRKF 401
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ EQ+E + FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I
Sbjct: 402 VGQGDKEGSDGMTQTEQQETLDAFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAI 461
Query: 208 KMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKS----IYANLA 262
+ +QR GRTGR+ GR ++LL + R+ F S + ++ K I + LA
Sbjct: 462 RSIQRKGRTGRQAEGRVMVLLAEDTRDEAYFWKSRHEQSTMTNELGRLKDSAGEIESELA 521
Query: 263 KNGPRMI-----PAHVTPRIKC 279
+ G PA TP ++
Sbjct: 522 QQGLDAFAGKPDPAAATPSVEV 543
>gi|448376033|ref|ZP_21559317.1| Hef nuclease [Halovivax asiaticus JCM 14624]
gi|445658051|gb|ELZ10874.1| Hef nuclease [Halovivax asiaticus JCM 14624]
Length = 819
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + + L A FVGQ
Sbjct: 353 HPKYAKTRMLLAETLGL--EGGE--RVIVFTESRDTAEALTEFLSE---SFDARRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ EQ++ ++ FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DREGSDGMTQTEQQDALEDFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR +L+ +
Sbjct: 466 RKGRTGRQSEGRVAVLMAE 484
>gi|448588730|ref|ZP_21649309.1| Hef nuclease, partial [Haloferax elongans ATCC BAA-1513]
gi|445736217|gb|ELZ87762.1| Hef nuclease, partial [Haloferax elongans ATCC BAA-1513]
Length = 757
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 21/175 (12%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF R +L L GE +VI+F R D + L + S F
Sbjct: 352 HPKFRETRILLAE--TLGIRDGE--RVIVFTESR-------DTAEALTEFLSQSFSVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q+EQ+E + KFR+GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDRDGSDGMSQKEQQEALDKFRSGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANL 261
+ +QR GRTGR+ +GR V+LL + R+ F S + K+ +++ + K A++
Sbjct: 461 RSIQRKGRTGRQADGRVVVLLAEDTRDEAYFWISRRREKTMEKELRSLKGAAADI 515
>gi|257052562|ref|YP_003130395.1| Hef nuclease [Halorhabdus utahensis DSM 12940]
gi|256691325|gb|ACV11662.1| helicase domain protein [Halorhabdus utahensis DSM 12940]
Length = 833
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H KF R R + +H GE +VI+F R + D L + K FVGQS
Sbjct: 353 HPKFRRTRMQIAETLGIH--DGE--RVIVFTESRDTAETLTDFLGEHFSVEK---FVGQS 405
Query: 157 S-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
G+TQ EQ+E ++ FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DTDGSDGMTQTEQQETLEAFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ G V+L+ +
Sbjct: 466 RKGRTGRQTEGAVVVLIAE 484
>gi|448726759|ref|ZP_21709151.1| Hef nuclease [Halococcus morrhuae DSM 1307]
gi|445793805|gb|EMA44376.1| Hef nuclease [Halococcus morrhuae DSM 1307]
Length = 806
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 101/183 (55%), Gaps = 25/183 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF R R +L L E GE +VI+F R D + L + A F
Sbjct: 351 HPKFRRARILLAQC--LGIEGGE--RVIVFTESR-------DTAETLTEFLGAHFETRKF 399
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ EQ+E + FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I
Sbjct: 400 VGQGDKEGSDGMTQNEQQETLDAFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAI 459
Query: 208 KMVQRLGRTGRKRNGRCVILLTQGR--EAHNFQTSMQTCK--SYVEKIINNK-SIYANLA 262
+ +QR GRTGR+ GR ++LL + EA+ +++ + + ++ + N SI ++LA
Sbjct: 460 RSIQRKGRTGRQTEGRVMVLLAEDTRDEAYFWKSRHEQSRMTGELDSLKNAAGSIESDLA 519
Query: 263 KNG 265
+ G
Sbjct: 520 QQG 522
>gi|448342391|ref|ZP_21531342.1| Hef nuclease [Natrinema gari JCM 14663]
gi|445625768|gb|ELY79122.1| Hef nuclease [Natrinema gari JCM 14663]
Length = 819
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + D L FVGQ
Sbjct: 353 HPKYSKARMLLAETLGL--EGGE--RVIVFTESRDTAEALTDFLSE---SFDTKRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ +Q+ ++ +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 406 DRDGSDGMTQTQQQAVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+L+ +
Sbjct: 466 RKGRTGRQTEGRVVVLMAE 484
>gi|448407016|ref|ZP_21573448.1| Hef nuclease [Halosimplex carlsbadense 2-9-1]
gi|445676822|gb|ELZ29339.1| Hef nuclease [Halosimplex carlsbadense 2-9-1]
Length = 850
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 87/156 (55%), Gaps = 13/156 (8%)
Query: 81 KPKLDINIMSSE-YAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDV 139
+PK+ I +E Y H KF R R ++ L E G+ +VI+F R + D
Sbjct: 336 EPKVREAIRRAEDYDDLHPKFRRTRMLIAQT--LGIENGD--RVIVFTESRDTAETLTDF 391
Query: 140 LKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEI 194
L A FVGQS G+TQ EQ+E + +FRAGEF L++TSV EEGLD+ E+
Sbjct: 392 LGE---HFTARKFVGQSDTEGSDGMTQNEQQETLDEFRAGEFEVLVSTSVAEEGLDVPEV 448
Query: 195 DLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
DLV+ ++ + I+ +QR GRTGR+ G +LL +
Sbjct: 449 DLVLFYEPVPTAIRAIQRKGRTGRQTEGAVSVLLAE 484
>gi|448578746|ref|ZP_21644122.1| Hef nuclease [Haloferax larsenii JCM 13917]
gi|445725329|gb|ELZ76953.1| Hef nuclease [Haloferax larsenii JCM 13917]
Length = 849
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF R +L + GE +VI+F R D + L + S F
Sbjct: 352 HPKFRETRILLAETLGIR--DGE--RVIVFTESR-------DTAEALTEFLSQSFSVRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q+EQ+E + KFR+GEF L++TSV EEGLD+ E+DLV+ F+ + I
Sbjct: 401 VGQGDRDGSDGMSQKEQQEALDKFRSGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ +GR V+LL +
Sbjct: 461 RSIQRKGRTGRQADGRVVVLLAE 483
>gi|407462582|ref|YP_006773899.1| DEAD/DEAH box helicase [Candidatus Nitrosopumilus koreensis AR1]
gi|407046204|gb|AFS80957.1| DEAD/DEAH box helicase [Candidatus Nitrosopumilus koreensis AR1]
Length = 496
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 83/136 (61%), Gaps = 13/136 (9%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K +L+ IL+S K +IF +YR V IF+ L L V A + +G++
Sbjct: 332 HSKIPKLKSILDSV---------PGKTLIFTSYRDSVDLIFNKLTELG--VSAGILIGKA 380
Query: 157 --SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLG 214
+G+ Q++Q E ++KFR G F+ LIAT VGEEGLDI E++ VI +D S ++ +QR G
Sbjct: 381 GETGLKQKKQIETVQKFRDGVFDVLIATRVGEEGLDIAEVNQVIFYDNVPSSVRFIQRRG 440
Query: 215 RTGRKRNGRCVILLTQ 230
RTGRK G+ V+L+ +
Sbjct: 441 RTGRKDTGKLVVLIAK 456
>gi|448731379|ref|ZP_21713679.1| Hef nuclease [Halococcus saccharolyticus DSM 5350]
gi|445792132|gb|EMA42744.1| Hef nuclease [Halococcus saccharolyticus DSM 5350]
Length = 816
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H KF R R +L L E GE +VI+F R + D L FVGQ
Sbjct: 351 HPKFRRARILLAQT--LGIEDGE--RVIVFTESRDTAETLTDFLGE---HFSTRKFVGQG 403
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ+EQ+E + +FR GEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 404 DKEGSDGMTQKEQQETLDEFRNGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 463
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR ++LL +
Sbjct: 464 RKGRTGRQTEGRVMVLLAE 482
>gi|340345003|ref|ZP_08668135.1| DEAD/DEAH box helicase domain protein [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520144|gb|EGP93867.1| DEAD/DEAH box helicase domain protein [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 503
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 13/136 (9%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K ++L+EI+ES K +IF +YR V IF+ K E + A + +G+S
Sbjct: 333 HSKILKLKEIIES---------VPGKALIFTSYRDSVDVIFN--KLTEMGISAGILIGKS 381
Query: 157 --SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLG 214
+G+ Q++Q + ++ FR G F L+AT VGEEGLDI E++ VI +D S I+ +QR G
Sbjct: 382 GETGLKQKKQIQTVQDFRDGLFRVLVATRVGEEGLDISEVNQVIFYDNVPSSIRYIQRRG 441
Query: 215 RTGRKRNGRCVILLTQ 230
RTGRK G+ V+L+ +
Sbjct: 442 RTGRKDTGKLVVLIAK 457
>gi|76800822|ref|YP_325830.1| Hef nuclease [Natronomonas pharaonis DSM 2160]
gi|76556687|emb|CAI48259.1| ATP-dependent RNA helicase/nuclease Hef [Natronomonas pharaonis DSM
2160]
Length = 845
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 90/171 (52%), Gaps = 13/171 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H KF R R +L L E GE +VI+F R + L + FVGQ
Sbjct: 353 HPKFRRTRILLAQ--TLGIEGGE--RVIVFTESRDTAESLTAFLGE---HFETRRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ EQKE + FR+GEF L++TSV EEGLD+ ++DLV+ ++ I+ +Q
Sbjct: 406 DKDGSDGMTQTEQKETLDAFRSGEFEVLVSTSVAEEGLDVPDVDLVLFYEPVPKGIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKSIYANL 261
R GRTGR +GR V+LL + R+ F S K E++ KSI +
Sbjct: 466 RKGRTGRASDGRVVVLLAEDTRDEAFFWMSRNEEKRMEEELRKLKSIEGEI 516
>gi|397772195|ref|YP_006539741.1| helicase domain protein [Natrinema sp. J7-2]
gi|397681288|gb|AFO55665.1| helicase domain protein [Natrinema sp. J7-2]
Length = 857
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + D L FVGQ
Sbjct: 391 HPKYSKARMLLAETLGL--EGGE--RVIVFTESRDTAEALTDFLSE---SFDTKRFVGQG 443
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ +Q+ ++ +FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 444 DRDGSDGMTQTQQQAVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 503
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+L+ +
Sbjct: 504 RKGRTGRQTEGRVVVLMAE 522
>gi|13542321|ref|NP_112009.1| RNA helicase (ERCC4-like) [Thermoplasma volcanium GSS1]
gi|14325756|dbj|BAB60659.1| translation initiation factor eIF4A [Thermoplasma volcanium GSS1]
Length = 513
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 73/114 (64%), Gaps = 5/114 (4%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEF 176
+ I+F ++R + LK +K F+GQ+ G++Q+EQ++I+++FR G +
Sbjct: 350 RAIVFTHFRATSDMLLAYLKNSSDKIKPVRFIGQADRGTDVGLSQEEQRQIIEQFRNGTY 409
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
N LIATS+ EEGLDI + D+V+ ++A S I+ +QR GRTGR R+G IL+ +
Sbjct: 410 NVLIATSIAEEGLDIPDTDVVVFYEAVPSEIRFIQRKGRTGRSRSGEVYILVYE 463
>gi|448737900|ref|ZP_21719932.1| Hef nuclease [Halococcus thailandensis JCM 13552]
gi|445802761|gb|EMA53063.1| Hef nuclease [Halococcus thailandensis JCM 13552]
Length = 811
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 25/183 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF R R +L L + GE +VI+F R D + L + A F
Sbjct: 351 HPKFRRTRILLAQC--LGIDGGE--RVIVFTESR-------DTAETLTEFLGAHFETRKF 399
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ EQ+E + FRAGEF L++TSV EEGLD+ E+DLV+ ++ + I
Sbjct: 400 VGQGDKEGSDGMTQNEQQETLDAFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAI 459
Query: 208 KMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCKSYVEKIINNKS----IYANLA 262
+ +QR GRTGR+ GR ++LL + R+ F S +++ + KS I ++LA
Sbjct: 460 RSIQRKGRTGRQTEGRVMVLLAEDTRDEAYFWKSRHEQSRMTDELDSLKSAAGAIESDLA 519
Query: 263 KNG 265
+ G
Sbjct: 520 QQG 522
>gi|448302430|ref|ZP_21492412.1| Hef nuclease [Natronorubrum tibetense GA33]
gi|445581659|gb|ELY36011.1| Hef nuclease [Natronorubrum tibetense GA33]
Length = 818
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H K+ + R +L L E GE +VI+F R + + L A FVGQ
Sbjct: 355 HPKYRKTRMLLAETLGL--EGGE--RVIVFTESRDTAEALTEFLND---SFDAKRFVGQG 407
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ +Q+E++ +FRA EF L++TSV EEGLD+ E+DLV+ ++ + I+ +Q
Sbjct: 408 DREGSDGMTQNQQQEVLDQFRAAEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 467
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ GR V+L+ +
Sbjct: 468 RKGRTGRQSEGRVVVLMAE 486
>gi|374724263|gb|EHR76343.1| ATP-dependent RNA helicase EIF-4A family [uncultured marine group
II euryarchaeote]
Length = 881
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
+K++IF YR V + + L + P ++ F+GQS G+TQ++Q + +FR GE
Sbjct: 362 SKMLIFTEYRDTVDHLVESLTAI-PGIQVDKFIGQSGKGKRKGMTQRQQLAQLNRFRDGE 420
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
N L+ATSVGEEGLD+ DLVI ++ S I+ +QR GRT R+R+G L+ G
Sbjct: 421 LNVLVATSVGEEGLDVPAADLVILYEPVASAIRAIQRRGRTARQRDGSVHTLIAVG 476
>gi|255072719|ref|XP_002500034.1| dead box helicase [Micromonas sp. RCC299]
gi|226515296|gb|ACO61292.1| dead box helicase [Micromonas sp. RCC299]
Length = 1778
Score = 94.4 bits (233), Expect = 8e-17, Method: Composition-based stats.
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 9/145 (6%)
Query: 166 EIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV 225
+++ FR G NTL+ATS+GEEGLDI +DL++ FD + I+ +QR+GRTGR R+G+ V
Sbjct: 780 DVLDAFRNGTLNTLVATSIGEEGLDIPSVDLIVFFDVVDT-IRTIQRMGRTGRARDGKVV 838
Query: 226 ILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVK 285
+L +GREA F+ + + + + ++ + + PRM+PA + P
Sbjct: 839 VLAQEGREAEKFRREQSSYDVLMRALCEPERVFKH-CNDCPRMLPAGLNPTCDL------ 891
Query: 286 DRVTPAKPSKKKPKENEKANKKSKK 310
RV P + K K++ K +K
Sbjct: 892 -RVLGPTPEELAAKNAPKSSGKKRK 915
>gi|332158155|ref|YP_004423434.1| Hef nuclease [Pyrococcus sp. NA2]
gi|331033618|gb|AEC51430.1| Hef nuclease [Pyrococcus sp. NA2]
Length = 749
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 133/238 (55%), Gaps = 29/238 (12%)
Query: 18 NRDLDRMIQRDFHVTHSLA----SALENLVTYGL---RSFYNNLVEVSKEDGSCPILGKD 70
N DL R + + H++A A+E L T GL R + L E +K GS +
Sbjct: 266 NHDL-----RKYLLFHAMALKLHHAIELLETQGLSALRVYLKKLYEEAK-TGST----RA 315
Query: 71 NDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYR 130
+ L +++K L + + + E H K L+++++ EK +K+I+F NYR
Sbjct: 316 SKELFLDRRMKKALALLLQAKELGLDHPKLNVLKKLIKEQL----EKKPNSKIIVFTNYR 371
Query: 131 VVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVG 185
++ + L + ++A FVGQ+S G++Q+EQK I+ F GEFN L+ATSVG
Sbjct: 372 ETAKKVVEELT--KEGIEARRFVGQASRENDRGMSQREQKIILDMFSRGEFNVLVATSVG 429
Query: 186 EEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTSMQ 242
EEGLD+ E+DLVI ++ S I+ VQR GRTGR+R GR VIL+ QG R+ + +S Q
Sbjct: 430 EEGLDVPEVDLVIFYEPVPSAIRSVQRRGRTGRQRPGRVVILIAQGTRDEAYYWSSRQ 487
>gi|193084204|gb|ACF09868.1| ATP-dependent RNA helicase EIF-4A family [uncultured marine group
II euryarchaeote KM3-136-D10]
Length = 928
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 6/115 (5%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGE 175
++VIIFA++R V EI L+ E K FVGQ+S G+TQ+ Q E +++FR G+
Sbjct: 368 SRVIIFAHFRDTVNEIVKRLEESE-HAKPERFVGQASRDGSAGMTQKAQLEGLQRFREGK 426
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
N L+ATSVGEEGLD+ DLV+ ++ S I+ +QR GRTGR R G IL+ +
Sbjct: 427 CNVLVATSVGEEGLDVPRADLVVFYEPVGSEIRTIQRRGRTGRHRAGTVHILIAR 481
>gi|340624705|ref|YP_004743158.1| Hef nuclease [Methanococcus maripaludis X1]
gi|339904973|gb|AEK20415.1| Hef nuclease [Methanococcus maripaludis X1]
Length = 755
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 88/144 (61%), Gaps = 13/144 (9%)
Query: 91 SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
+E H K+ ++ EI++ + E K+IIFA YR V +I D+L E ++A
Sbjct: 326 NELDIEHPKYEKMLEIVKEILK------ENEKIIIFAQYRDTVQKIVDLLS--ENEIEAI 377
Query: 151 MFVGQSS----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
MFVGQS+ G++Q+EQ + ++KF+ E N L++TSV EEG+DI ++ V+ ++ S
Sbjct: 378 MFVGQSNKDGKGMSQKEQAKAIEKFK-NEANVLVSTSVSEEGIDISSVNYVLFYEPVPSE 436
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQ 230
I+M+QR GR R G+ ++L+ Q
Sbjct: 437 IRMIQRRGRAARGEGGQVIVLIAQ 460
>gi|161528452|ref|YP_001582278.1| DEAD/DEAH box helicase [Nitrosopumilus maritimus SCM1]
gi|160339753|gb|ABX12840.1| DEAD/DEAH box helicase domain protein [Nitrosopumilus maritimus
SCM1]
Length = 502
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 83/136 (61%), Gaps = 13/136 (9%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K +L++I+ES K +IF +YR V I L L V A + +G++
Sbjct: 332 HSKIPKLKDIIES---------VPGKALIFTSYRDSVDLIHSKLTELG--VSAGILIGKA 380
Query: 157 --SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLG 214
+G+ Q++Q EI++KFR G F+ LIAT VGEEGLDI E++ VI +D S ++ +QR G
Sbjct: 381 GETGLKQKKQIEIVQKFRDGIFDVLIATRVGEEGLDIAEVNQVIFYDNVPSSVRFIQRRG 440
Query: 215 RTGRKRNGRCVILLTQ 230
RTGRK G+ V+L+ +
Sbjct: 441 RTGRKDTGKLVVLIAK 456
>gi|45358958|ref|NP_988515.1| Hef nuclease [Methanococcus maripaludis S2]
gi|45047824|emb|CAF30951.1| Helix-hairpin-helix motif:DEAD/DEAH box helicase:Helicase,
C-terminal:Helix-hairpin-helix DNA-binding, class
1:ERCC4 domain [Methanococcus maripaludis S2]
Length = 752
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 88/144 (61%), Gaps = 13/144 (9%)
Query: 91 SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
+E H K+ ++ EI++ + E K++IFA YR V +I D+L E ++A
Sbjct: 326 NELDIEHPKYEKMLEIVKEILK------ENEKIVIFAQYRDTVQKIVDLLS--ENEIEAI 377
Query: 151 MFVGQSS----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
MFVGQS+ G++Q+EQ + ++KF+ E N L++TSV EEG+DI ++ V+ ++ S
Sbjct: 378 MFVGQSNKDGKGMSQKEQAKAIEKFK-NEANVLVSTSVSEEGIDISSVNYVLFYEPVPSE 436
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQ 230
I+M+QR GR R G+ ++L+ Q
Sbjct: 437 IRMIQRRGRAARGEGGQVIVLIAQ 460
>gi|424811846|ref|ZP_18237086.1| ERCC4-like helicase [Candidatus Nanosalinarum sp. J07AB56]
gi|339756068|gb|EGQ39651.1| ERCC4-like helicase [Candidatus Nanosalinarum sp. J07AB56]
Length = 741
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 111/215 (51%), Gaps = 30/215 (13%)
Query: 35 LASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDN-DLQ---NLLQQLKPKLDINIMS 90
++ A E L T G+ Y ++ ++D + N D Q +L++ LK +
Sbjct: 277 VSQAQERLETQGVTQCYRYTRKLKQDDSKAAARAQQNEDFQEAKSLVEYLKKE------- 329
Query: 91 SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKP--LEPMVK 148
H K LR IL EK E K I+F YR V I L+ L P+
Sbjct: 330 ---GEEHPKLEELRGILGDM-----EKNE--KAIVFTEYRDSVDTITSALQDEGLSPV-- 377
Query: 149 ASMFVGQSS--GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
F+GQS G+TQ++QKE++ F ++ L++TS+GEEGLDI +D V+ ++ S
Sbjct: 378 --KFIGQSGDDGMTQKKQKEVLDAFEEDHYDVLVSTSIGEEGLDIPAVDHVVFYEPVASE 435
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQG-REAHNFQTS 240
I+ +QR GRTGR+ +G V+L+ +G R+ N+ ++
Sbjct: 436 IRDIQRAGRTGRQESGNVVVLMAEGTRDEGNYWSA 470
>gi|313222359|emb|CBY39301.1| unnamed protein product [Oikopleura dioica]
Length = 625
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 34/254 (13%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVL-KPLEPMVKASMFVGQSS 157
K L + LE +F + G + ++F N R +V EI L + V+AS+FVG +
Sbjct: 23 KLKNLGQELEHYFDT-MKNGYDVRALVFVNDRSIVEEIRKYLMENTSANVRASIFVGHGA 81
Query: 158 GVT----------QQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
T Q++Q E ++KF+ G+ N LIATS+GEEGLDI + +LV+ +D +
Sbjct: 82 PTTKLKVTAPKISQKQQLEQLEKFKKGDINVLIATSIGEEGLDISDCNLVVQYDHSNNQT 141
Query: 208 KMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAK---- 263
+ QR GRTGRK GR +I L +E ++ ++++ K +E +N+ + + A+
Sbjct: 142 RNAQRSGRTGRKHAGR-IIYLMYDKEYECYKKALESEK-VLETFMNSLTSQSLEARKKIW 199
Query: 264 ---------NGPRMIPAHVT-PRIKCLH---IVVKDRVTP---AKPSKKKPKENEKANKK 307
+ P + P + P+ K LH + ++ TP A+ KK PK K+ +
Sbjct: 200 KKKLDYEIHDWPVLSPQPIPQPQYKKLHRPPSPIPEKKTPSRKARTPKKTPKNTPKSTAR 259
Query: 308 SKKKLETDGNSEPA 321
K + N+EP
Sbjct: 260 KTPKKRSVPNNEPG 273
>gi|15791152|ref|NP_280976.1| Hef nuclease [Halobacterium sp. NRC-1]
gi|169236908|ref|YP_001690108.1| Hef nuclease [Halobacterium salinarum R1]
gi|10581766|gb|AAG20456.1| ATP-dependent RNA helicase homolog eIF-4A [Halobacterium sp. NRC-1]
gi|167727974|emb|CAP14762.1| ATP-dependent RNA helicase/nuclease Hef [Halobacterium salinarum
R1]
Length = 784
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 83/151 (54%), Gaps = 26/151 (17%)
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYR-------VVVAEIFDVLKPLE 144
E+ H KF + R +L L E G+ +VI+F R + E FD +
Sbjct: 346 EFDGLHPKFRQARMLLAE--TLGIEDGD--RVIVFTESRDTAEALTAFLGEHFDTRR--- 398
Query: 145 PMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVIC 199
FVGQ S G+TQ EQ+E + +FR G+F L++TSV EEGLD+ E+DLV+
Sbjct: 399 -------FVGQGDADGSDGMTQTEQRETLAEFRNGDFEVLVSTSVAEEGLDVPEVDLVLF 451
Query: 200 FDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
F+ + I+ VQR GRTGR+ GR V+LL +
Sbjct: 452 FEPVPTAIRSVQRKGRTGRQTAGRVVVLLAE 482
>gi|315426340|dbj|BAJ47980.1| helicase-associated endonuclease for fork-structured DNA
[Candidatus Caldiarchaeum subterraneum]
gi|315426365|dbj|BAJ48004.1| helicase-associated endonuclease for fork-structured DNA
[Candidatus Caldiarchaeum subterraneum]
gi|343485150|dbj|BAJ50804.1| helicase-associated endonuclease for fork-structured DNA
[Candidatus Caldiarchaeum subterraneum]
Length = 694
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEIMKKFRAGEF 176
++++FAN R I L L +A MF+G+ G +TQQEQ ++K+FR G F
Sbjct: 365 RIMVFANIRNTAEVIVSRLTELG--YRARMFIGKGEGKTGPKMTQQEQIRLLKEFREGVF 422
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
N L+ATS+GEEGLDI E VI ++ S I+ +QR GRTGRK G+ IL+ +
Sbjct: 423 NILVATSIGEEGLDIPECGYVIFYEPAISGIRYIQRRGRTGRKLPGKVTILIAE 476
>gi|313233376|emb|CBY24491.1| unnamed protein product [Oikopleura dioica]
Length = 985
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 32/253 (12%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVL-KPLEPMVKASMFVGQSS 157
K L + LE +F + G + ++F N R +V EI L + V+AS+FVG +
Sbjct: 381 KLKNLGQELEHYFDT-MKNGYDVRALVFVNDRSIVEEIRKYLMENTSANVRASIFVGHGA 439
Query: 158 GVT----------QQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
T Q++Q E ++KF+ G+ N LIATS+GEEGLDI + +LV+ +D +
Sbjct: 440 PTTKLKVTAPKISQKQQLEQLEKFKKGDINVLIATSIGEEGLDISDCNLVVQYDHSNNQT 499
Query: 208 KMVQRLGRTGRKRNGRCVIL------------LTQGREAHNFQTSMQTCKSYVEKIINNK 255
+ QR GRTGRK GR + L L + F S+ + V K I K
Sbjct: 500 RNAQRSGRTGRKHAGRIIYLMYDKEYECYKKALESEKVLETFMNSLTSQSLEVRKKIWKK 559
Query: 256 SIYANLAKNGPRMIPAHVT-PRIKCLH---IVVKDRVTP---AKPSKKKPKENEKANKKS 308
+ + + P + P + P+ K LH V ++ TP A+ KK PK K+ +
Sbjct: 560 KLDYEI-HDWPVLSPQPIPQPQYKKLHRPPSPVPEKKTPSRKARTPKKTPKNTPKSTARK 618
Query: 309 KKKLETDGNSEPA 321
K + N+EP
Sbjct: 619 TPKKRSVPNNEPG 631
>gi|3599409|gb|AAC62714.1| ATP-dependent RNA helicase [Cenarchaeum symbiosum]
Length = 502
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 89/149 (59%), Gaps = 10/149 (6%)
Query: 115 AEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS--GVTQQEQKEIMKKFR 172
A +G K ++F +YR V I LK + + + +G++ G+ Q++Q E + KFR
Sbjct: 340 AVRGARGKALVFTSYRDSVDLIHSRLKA--AGINSGILIGKAGEKGLKQRKQVETVAKFR 397
Query: 173 AGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGR 232
G ++ L++T VGEEGLDI E++LVI +D S I+ VQR GRTGRK GR ++L+ +G
Sbjct: 398 DGGYDVLVSTRVGEEGLDISEVNLVIFYDNVPSSIRYVQRRGRTGRKDAGRLIVLMAKGT 457
Query: 233 --EAHNF--QTSMQTCKSYVEKIINNKSI 257
EA+ + + M K E++ N+S+
Sbjct: 458 IDEAYYWIGRRKMSAAKGMGERM--NRSL 484
>gi|134045229|ref|YP_001096715.1| Hef nuclease [Methanococcus maripaludis C5]
gi|132662854|gb|ABO34500.1| ERCC4 domain protein [Methanococcus maripaludis C5]
Length = 749
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 87/144 (60%), Gaps = 13/144 (9%)
Query: 91 SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
+E H K+ ++ EI+ + E K+IIFA YR V +I D+L E ++A
Sbjct: 326 NELDIEHPKYEKMLEIVSEILK------ENEKIIIFAQYRDTVQKIVDLLS--ENEIEAI 377
Query: 151 MFVGQSS----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
MFVGQS+ G++Q+EQ + ++KF+ E N L++TSV EEG+DI ++ V+ ++ S
Sbjct: 378 MFVGQSNKDGKGMSQKEQAKAIEKFK-NEANVLVSTSVSEEGIDISSVNYVLFYEPVPSE 436
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQ 230
I+M+QR GR R G+ ++L+ +
Sbjct: 437 IRMIQRRGRAARGEGGQVIVLIAE 460
>gi|84488838|ref|YP_447070.1| Hef nuclease [Methanosphaera stadtmanae DSM 3091]
gi|84372157|gb|ABC56427.1| predicted ERCC4-like helicase [Methanosphaera stadtmanae DSM 3091]
Length = 752
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 11/151 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K RL E+L + + +KVI+F+ +R I++ + +KA F GQ+
Sbjct: 346 HPKMKRLIELLNQII----DDDKKSKVIVFSQFRDTTKSIYENCN--KNNLKALRFYGQA 399
Query: 157 S-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G++Q++Q E + F+ ++N LI+TSV EEG+DI +D VI ++ S I+M+Q
Sbjct: 400 SRENDKGLSQKKQIETINAFKNEDYNILISTSVAEEGIDIPSVDYVILYEPVPSEIRMIQ 459
Query: 212 RLGRTGRKRNGRCVILLTQGREAHNFQTSMQ 242
R GRTGRK +G IL+T+G ++ S Q
Sbjct: 460 RKGRTGRKHSGEMFILMTKGTLDESYYWSSQ 490
>gi|16082461|ref|NP_394951.1| RNA helicase (RIG-I) [Thermoplasma acidophilum DSM 1728]
gi|10640841|emb|CAC12619.1| RNA helicase (RIG-I) related protein [Thermoplasma acidophilum]
Length = 508
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 96/170 (56%), Gaps = 12/170 (7%)
Query: 88 IMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMV 147
+M + +++ K + I+ES+ +A + I+F +YR+ + D ++ +
Sbjct: 320 LMLAADGYTNPKMEKTLSIMESNVHGNA------RAIVFTHYRITSDLLMDYIQKNGTSL 373
Query: 148 KASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDA 202
K F+GQ+ G++Q +QK+I++ F+ +N LIATS+ EEGLDI + D VI ++A
Sbjct: 374 KPVRFIGQADRGSDEGLSQDQQKKIIEDFKNNVYNVLIATSIAEEGLDIPDTDFVIFYEA 433
Query: 203 QKSPIKMVQRLGRTGRKRNGRCVILLTQ-GREAHNFQTSMQTCKSYVEKI 251
S I+ +QR GRTGR RNG+ IL+ + R+ + +S++ + I
Sbjct: 434 VPSEIRYIQRKGRTGRSRNGQVYILVFENSRDMAYYYSSIRKVSRMTQTI 483
>gi|452206230|ref|YP_007486352.1| ATP-dependent RNA helicase/nuclease Hef [Natronomonas moolapensis
8.8.11]
gi|452082330|emb|CCQ35585.1| ATP-dependent RNA helicase/nuclease Hef [Natronomonas moolapensis
8.8.11]
Length = 835
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 77/139 (55%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H KF R R +L L E GE +VI+F R AE L FVGQ
Sbjct: 353 HPKFRRARILLAQ--TLGIEDGE--RVIVFTESRDT-AETLTAF--LGEHFSTRRFVGQG 405
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ EQK+ + FR GEF L++TSV EEGLD+ ++DLV+ ++ I+ +Q
Sbjct: 406 DKEGSDGMTQTEQKDTLDAFRNGEFEVLVSTSVAEEGLDVPDVDLVLFYEPVPKGIRSIQ 465
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR +GR V+LL +
Sbjct: 466 RKGRTGRASDGRVVVLLAE 484
>gi|159905661|ref|YP_001549323.1| Hef nuclease [Methanococcus maripaludis C6]
gi|159887154|gb|ABX02091.1| ERCC4 domain protein [Methanococcus maripaludis C6]
Length = 751
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 88/144 (61%), Gaps = 13/144 (9%)
Query: 91 SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
+E H K+ ++ EIL+ + E K+IIFA YR V +I D+L E ++A
Sbjct: 326 NELDIEHPKYEKMLEILKEILK------ENEKIIIFAQYRDTVQKIVDLLS--ENGIEAI 377
Query: 151 MFVGQSS----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
MFVGQS+ G++Q EQ + +++F++ + N L++TSV EEG+DI ++ V+ ++ S
Sbjct: 378 MFVGQSNKDGKGMSQTEQAKAIERFKS-DVNVLVSTSVSEEGIDISGVNYVLFYEPVPSE 436
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQ 230
I+M+QR GR R G+ ++L+ +
Sbjct: 437 IRMIQRRGRAARGEGGQVIVLIAE 460
>gi|47079403|gb|AAT10146.1| ATP-dependent RNA helicase [uncultured marine group II
euryarchaeote DeepAnt-JyKC7]
Length = 878
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 6/117 (5%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS-----SGVTQQEQKEIMKKFRA 173
E ++IIFA +R V + L L+ + F+GQS G+T ++Q +++FR+
Sbjct: 362 EEARIIIFATFRDSVGALEKALTGLQD-CRPIQFIGQSRKSSAGGLTPKQQVARIEEFRS 420
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
G N LIATSVGEEGLDI DLVI ++ S I+ +QR GRTGR R+G V+L+ +
Sbjct: 421 GSANVLIATSVGEEGLDIPTADLVIFYEPVPSEIRTIQRRGRTGRHRDGDVVVLIAE 477
>gi|399576326|ref|ZP_10770083.1| ercc4-like helicase [Halogranum salarium B-1]
gi|399239037|gb|EJN59964.1| ercc4-like helicase [Halogranum salarium B-1]
Length = 829
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 12/143 (8%)
Query: 93 YAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMF 152
Y H KF + R +L ++ GE +VI+F R + D L F
Sbjct: 348 YDALHPKFSKTRILLAETLGIN--DGE--RVIVFTESRDTAEALTDFLSQ---SFSTRRF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q+EQ+E + FR GEF L++TSV EEGLD+ E+DLV+ ++ + I
Sbjct: 401 VGQGNKEGSDGMSQKEQQETLDAFRNGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ G+ ++L+ +
Sbjct: 461 RSIQRKGRTGRQTEGKVIVLMAE 483
>gi|193083970|gb|ACF09645.1| ATP dependent RNA helicase [uncultured marine crenarchaeote
AD1000-56-E4]
Length = 497
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 77/114 (67%), Gaps = 8/114 (7%)
Query: 121 TKVIIFANYRVVVAEIFDVL-KPLEPM-VKASMFVGQS--SGVTQQEQKEIMKKFRAGEF 176
+KV+IF++YR V DV+ K L M + A + +G++ +G+ Q++Q E +++FR G
Sbjct: 348 SKVLIFSSYRDSV----DVIQKKLVSMDIAAEILIGKAGQTGLKQEKQIETVQRFRDGVT 403
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
L+AT VGEEGLDI E++LVI +D S I+ +QR GRTGRK GR V+L+ +
Sbjct: 404 KALVATRVGEEGLDISEVNLVIFYDNVPSSIRFIQRKGRTGRKDTGRLVVLIAK 457
>gi|269986940|gb|EEZ93216.1| type III restriction protein res subunit [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 508
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 8/141 (5%)
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
E H K +L I ++F E K IIFA YR V I + + L P V+
Sbjct: 334 EQGIEHPKLKQLESIFSNYF------NEEKKAIIFAQYRDTVDVICNSISNL-PGVRPIK 386
Query: 152 FVGQS-SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
F+GQ G++Q+EQ I+K F +G +N L++TSV EEG+ I +D+ I ++ S I+ +
Sbjct: 387 FIGQGKGGLSQKEQVNIIKDFESGVYNVLVSTSVSEEGMSIKGVDIAIFYETIPSAIRNI 446
Query: 211 QRLGRTGRKRNGRCVILLTQG 231
QR GR GR G IL+T+G
Sbjct: 447 QRRGRVGRFSAGSIFILITRG 467
>gi|150402564|ref|YP_001329858.1| Hef nuclease [Methanococcus maripaludis C7]
gi|150033594|gb|ABR65707.1| ERCC4 domain protein [Methanococcus maripaludis C7]
Length = 749
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 93/156 (59%), Gaps = 14/156 (8%)
Query: 91 SEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKAS 150
+E H K+ ++ EI++ E K+IIFA YR V +I D+L E ++A
Sbjct: 326 NELDIEHPKYEKMLEIVKEIL------TENEKIIIFAQYRDTVQKIVDLLS--ENNIEAI 377
Query: 151 MFVGQSS----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
MFVGQS+ G++Q+EQ + +++F++ + N L++TSV EEG+DI ++ V+ ++ S
Sbjct: 378 MFVGQSNKDGKGMSQKEQAKAIERFKS-DANVLVSTSVSEEGIDISSVNYVLFYEPVPSE 436
Query: 207 IKMVQRLGRTGRKRNGRCVILLTQ-GREAHNFQTSM 241
I+M+QR GR R G+ ++L+ + R+ +Q +
Sbjct: 437 IRMIQRRGRAARGEGGQVIVLIAEKTRDEGYYQAGL 472
>gi|290559606|gb|EFD92934.1| DEAD/DEAH box helicase domain protein [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 508
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K +L ++L+++F E K IIFA YR V I+ + +E ++ F+GQ
Sbjct: 339 HPKLEQLVQLLKNNF------SEDKKAIIFAQYRDTVDAIYSRISSMEN-IRPVRFIGQG 391
Query: 157 -SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
G++Q+EQ I+ F +G +N L++TSV EEG+ I +D+ + ++ S I+ +QR GR
Sbjct: 392 KGGLSQKEQVNIISDFESGVYNVLVSTSVSEEGMSIRGVDIAVFYETIPSAIRNIQRRGR 451
Query: 216 TGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINN 254
GR G+ IL+T+G ++ + + ++KII N
Sbjct: 452 VGRFAAGKVFILITKGTNDESYYWLSKRREKSMKKIIKN 490
>gi|288931017|ref|YP_003435077.1| helicase [Ferroglobus placidus DSM 10642]
gi|288893265|gb|ADC64802.1| helicase domain protein [Ferroglobus placidus DSM 10642]
Length = 761
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 96/155 (61%), Gaps = 13/155 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K +L EILE F EK ++VI+F N+R ++ ++ P AS F+GQ+
Sbjct: 343 HPKVNKLMEILEEQF----EKNPDSRVIVFTNFRDTAEKLLKIVSQKFP---ASKFIGQA 395
Query: 157 -----SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
+G++Q+EQ +++ FR G+ LIATSVGEEGLDI E DLV+ ++A S I+ +Q
Sbjct: 396 KREEDAGMSQKEQLRVLEMFRRGDVKVLIATSVGEEGLDIPETDLVVFYEAVPSEIRAIQ 455
Query: 212 RLGRTGRKRNGRCVILLTQG-REAHNFQTSMQTCK 245
R GRTGR R GR V+L+T+G R+ + S++ K
Sbjct: 456 RKGRTGRGREGRIVVLITKGTRDEAYYYASLRKEK 490
>gi|118576367|ref|YP_876110.1| ERCC4-like helicase [Cenarchaeum symbiosum A]
gi|118194888|gb|ABK77806.1| ERCC4-like helicase [Cenarchaeum symbiosum A]
Length = 558
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 115 AEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS--GVTQQEQKEIMKKFR 172
A +G K ++F +YR V I L+ + + + +G++ G+ Q++Q E + KFR
Sbjct: 395 AVRGAKGKALVFTSYRDSVDLIHSKLQA--AGINSGILIGKAGEKGLKQKKQVETVAKFR 452
Query: 173 AGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
G ++ L++T VGEEGLDI E++LV+ +D S I+ VQR GRTGRK G+ V+L+ +G
Sbjct: 453 DGGYDVLVSTRVGEEGLDISEVNLVVFYDNVPSSIRYVQRRGRTGRKDAGKLVVLMAKG 511
>gi|3599385|gb|AAC62691.1| ATP-dependent RNA helicase [Cenarchaeum symbiosum]
Length = 503
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 115 AEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS--GVTQQEQKEIMKKFR 172
A +G K ++F +YR V I L+ + + + +G++ G+ Q++Q E + KFR
Sbjct: 340 AVRGAKGKALVFTSYRDSVDLIHSKLQA--AGINSGILIGKAGEKGLKQKKQVETVAKFR 397
Query: 173 AGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
G ++ L++T VGEEGLDI E++LV+ +D S I+ VQR GRTGRK G+ V+L+ +G
Sbjct: 398 DGGYDVLVSTRVGEEGLDISEVNLVVFYDNVPSSIRYVQRRGRTGRKDAGKLVVLMAKG 456
>gi|355572972|ref|ZP_09043940.1| helicase domain protein [Methanolinea tarda NOBI-1]
gi|354823984|gb|EHF08243.1| helicase domain protein [Methanolinea tarda NOBI-1]
Length = 746
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 89/137 (64%), Gaps = 10/137 (7%)
Query: 115 AEKGETT---KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKE 166
AE+ ET+ ++IIFA +R +V +I D L E + FVGQ++ G++Q++Q E
Sbjct: 361 AEQLETSPESRIIIFATFRDMVQQIVDFLS--ERGIPCQRFVGQATRDTEKGLSQKKQIE 418
Query: 167 IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVI 226
++KFRAG+F L+ATSVGEEGLDI DLV+ ++A S I+ +QR GRTGR GR V+
Sbjct: 419 ALQKFRAGDFRVLVATSVGEEGLDIPSTDLVVFYEAVPSEIRSIQRKGRTGRSGRGRIVV 478
Query: 227 LLTQGREAHNFQTSMQT 243
L+T+G F+ QT
Sbjct: 479 LVTKGTTDEVFRYVSQT 495
>gi|448460272|ref|ZP_21597097.1| Hef nuclease [Halorubrum lipolyticum DSM 21995]
gi|445807013|gb|EMA57099.1| Hef nuclease [Halorubrum lipolyticum DSM 21995]
Length = 827
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 20/150 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L ++ E + I+F R D + L + AS F
Sbjct: 350 HPKFSKARILLAETLGIN----EGERAILFTESR-------DTAEALVEFLSASFDVRKF 398
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q++Q+E + +F+AGEF L++TSV EEGLD+ E+DLV ++ + I
Sbjct: 399 VGQGDKEGSDGMSQKQQQETLDEFKAGEFEVLVSTSVAEEGLDVPEVDLVCFYEPVPTAI 458
Query: 208 KMVQRLGRTGRKRNGRCVILLTQGREAHNF 237
+ +QR GRTGR+ G+ V+L+ + F
Sbjct: 459 RSIQRKGRTGRQAEGKVVVLMAEDTRDEAF 488
>gi|448535918|ref|ZP_21622302.1| Hef nuclease [Halorubrum hochstenium ATCC 700873]
gi|445702727|gb|ELZ54668.1| Hef nuclease [Halorubrum hochstenium ATCC 700873]
Length = 821
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L ++ E + I+F R D + L + AS F
Sbjct: 350 HPKFSKARILLAETLGIN----EGERAILFTESR-------DTAEALVEFLSASFDVRKF 398
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q++Q+E + +F+AGEF L++TSV EEGLD+ E+DLV ++ + I
Sbjct: 399 VGQGDKDGSDGMSQKQQQETLDEFKAGEFEVLVSTSVAEEGLDVPEVDLVCFYEPVPTAI 458
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ G+ V+L+ +
Sbjct: 459 RSIQRKGRTGRQAEGKVVVLMAE 481
>gi|359416970|ref|ZP_09209211.1| Hef nuclease [Candidatus Haloredivivus sp. G17]
gi|358032669|gb|EHK01333.1| Hef nuclease [Candidatus Haloredivivus sp. G17]
Length = 708
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 34/215 (15%)
Query: 35 LASALENLVTYGLRSFYNNLVEVSKEDGSCPILGK----DNDLQ---NLLQQLKPKLDIN 87
++ A+E L T G+ Y+ + + +D GK D D + +L++ LK K
Sbjct: 275 ISQAIELLETQGVSQCYSYMRGLENDDSKA---GKKALNDEDFRKAKSLVEYLKKK---- 327
Query: 88 IMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMV 147
H K ++ E+L+ G + I+F YR +I + L+ V
Sbjct: 328 ------GEEHPKLEKVVELLD---------GFDGRAIVFTEYRASADKIVEELEASHDPV 372
Query: 148 KASMFVGQ--SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKS 205
K FVGQ G+TQ +Q E +++F GE++ L++TS+GEEGLD+ +D VI ++ S
Sbjct: 373 K---FVGQQGDDGMTQTQQIETLEQFGDGEYDVLVSTSIGEEGLDVPSVDKVIFYEPVSS 429
Query: 206 PIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
++ +QR+GRTGR +G +L+ + + S
Sbjct: 430 SVRDIQRMGRTGRHESGEVSVLIAEDTRDEGYYWS 464
>gi|448462984|ref|ZP_21597905.1| Hef nuclease [Halorubrum kocurii JCM 14978]
gi|445817487|gb|EMA67359.1| Hef nuclease [Halorubrum kocurii JCM 14978]
Length = 821
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L ++ GE + I+F R D + L + AS F
Sbjct: 350 HPKFSKARILLAETLGING--GE--RAILFTESR-------DTAEALVEFLSASFDVRKF 398
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q++Q+E + +F+AGEF L++TSV EEGLD+ E+DLV ++ + I
Sbjct: 399 VGQGDKEGSDGMSQKQQQETLDEFKAGEFEVLVSTSVAEEGLDVPEVDLVCFYEPVPTAI 458
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ G+ V+L+ +
Sbjct: 459 RSIQRKGRTGRQAEGKVVVLMAE 481
>gi|333910260|ref|YP_004483993.1| helicase [Methanotorris igneus Kol 5]
gi|333750849|gb|AEF95928.1| helicase domain protein [Methanotorris igneus Kol 5]
Length = 791
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 29/233 (12%)
Query: 35 LASALENLVTYGLRSFYNNLVEVSKE-DGSCPILGKDNDLQNLLQQLKPKLDINIMSSEY 93
L ALE L T G F N + +S + S + D + ++ L+ +LDI
Sbjct: 279 LFHALEVLETQGRGVFLNYIERLSNQRTKSAKSIVNDERIIKVVNNLR-QLDI------- 330
Query: 94 AWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFV 153
H KF +L EI+E + K K+I+FA YR V +I +L E +KA FV
Sbjct: 331 --EHPKFDKLVEIVEEILK----KNRDEKIIVFAQYRDTVDKIVRLLN--ERGIKAIRFV 382
Query: 154 GQSS----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
GQS+ G++Q+EQ + +++F+ N L++TSV EEG+DI ++ VI ++ S I+
Sbjct: 383 GQSNREGKGMSQKEQIKALEEFKKNG-NVLVSTSVSEEGIDISAVNYVIFYEPVPSEIRF 441
Query: 210 VQRLGRTGRKRNGRCVILLTQG-------REAHNFQTSMQTCKSYVEKIINNK 255
+QR GR R G +IL+ +G R A + +M+ ++KI+N K
Sbjct: 442 IQRRGRAARGEGGIVIILIAKGTVDEIYYRSAIAKEKNMKRILKNMQKILNKK 494
>gi|448433353|ref|ZP_21585874.1| Hef nuclease [Halorubrum tebenquichense DSM 14210]
gi|445686366|gb|ELZ38690.1| Hef nuclease [Halorubrum tebenquichense DSM 14210]
Length = 842
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 82/143 (57%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L L + GE + I+F R D + L + AS F
Sbjct: 350 HPKFSKARILLAET--LGIDGGE--RAILFTESR-------DTAEALVEFLSASFDVRKF 398
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q++Q+E + +F+AGEF L++TSV EEGLD+ E+DLV ++ + I
Sbjct: 399 VGQGDKDGSDGMSQKQQQETLDEFKAGEFEVLVSTSVAEEGLDVPEVDLVCFYEPVPTAI 458
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ G+ V+L+ +
Sbjct: 459 RSIQRKGRTGRQAEGKVVVLMAE 481
>gi|448489210|ref|ZP_21607584.1| Hef nuclease [Halorubrum californiensis DSM 19288]
gi|445695155|gb|ELZ47266.1| Hef nuclease [Halorubrum californiensis DSM 19288]
Length = 814
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 20/150 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L L + GE + I+F R D + L + AS F
Sbjct: 350 HPKFSKARILLAET--LGIDGGE--RAILFTESR-------DTAEALVEFLSASFDVRKF 398
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q++Q+E + +F+AGEF L++TSV EEGLD+ E+DLV ++ + I
Sbjct: 399 VGQGDKDGSDGMSQKQQQETLDEFKAGEFEVLVSTSVAEEGLDVPEVDLVCFYEPVPTAI 458
Query: 208 KMVQRLGRTGRKRNGRCVILLTQGREAHNF 237
+ +QR GRTGR+ G+ V+L+ + F
Sbjct: 459 RSIQRKGRTGRQAEGKVVVLMAEDTRDEAF 488
>gi|297619461|ref|YP_003707566.1| ERCC4 domain-containing protein [Methanococcus voltae A3]
gi|297378438|gb|ADI36593.1| ERCC4 domain protein [Methanococcus voltae A3]
Length = 822
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 87/145 (60%), Gaps = 14/145 (9%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS----GVTQQEQKEIMKKFRAGEFN 177
KVI+FA YR V++I + LK E ++A MFVGQS+ G++Q+EQ + + KF++ + +
Sbjct: 364 KVIVFAQYRDTVSKIVESLK--EQDIEALMFVGQSNKDGKGMSQKEQSKAIAKFKS-DID 420
Query: 178 TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG------ 231
L++TSV EEG+DI ++ V+ ++ S I+ +QR GR R G +IL+ +G
Sbjct: 421 VLVSTSVSEEGMDISAVNYVVFYEPVPSEIRFIQRRGRVMRGEGGEVIILIAKGTRDEGY 480
Query: 232 -REAHNFQTSMQTCKSYVEKIINNK 255
R A + SM+ ++K +N K
Sbjct: 481 YRAAIAKEKSMKNILKDMQKTLNEK 505
>gi|345004287|ref|YP_004807140.1| ERCC4 domain-containing protein [halophilic archaeon DL31]
gi|344319913|gb|AEN04767.1| ERCC4 domain protein [halophilic archaeon DL31]
Length = 790
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 78/141 (55%), Gaps = 20/141 (14%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L + G+ +VI+F R D + L + S F
Sbjct: 352 HPKFSQARILLAQTLGI----GDGERVILFTESR-------DTAEALTEFLGQSFETRKF 400
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G+TQ +Q+E + FR GEF L++TSV EEGLD+ E+DLV+ ++ + I
Sbjct: 401 VGQGDKQGSDGMTQTQQQERLDAFRDGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAI 460
Query: 208 KMVQRLGRTGRKRNGRCVILL 228
+ +QR GRTGR+ G+ V+LL
Sbjct: 461 RSIQRKGRTGRQTAGKVVVLL 481
>gi|222480951|ref|YP_002567188.1| Hef nuclease [Halorubrum lacusprofundi ATCC 49239]
gi|222453853|gb|ACM58118.1| ERCC4 domain protein [Halorubrum lacusprofundi ATCC 49239]
Length = 836
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H KF + R +L ++ E + I+F R + + L + K FVGQ
Sbjct: 350 HPKFSKARILLAETLGIN----EGERAILFTESRDTAEALVEFLSTSFDVRK---FVGQG 402
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G++Q++Q+E + +F+AG+F L++TSV EEGLD+ E+DLV ++ + I+ +Q
Sbjct: 403 DKEGSDGMSQKQQQETLDEFKAGDFEVLVSTSVAEEGLDVPEVDLVCFYEPVPTAIRSIQ 462
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ G+ V+L+ +
Sbjct: 463 RKGRTGRQAEGKVVVLMAE 481
>gi|15679414|ref|NP_276531.1| Hef nuclease [Methanothermobacter thermautotrophicus str. Delta H]
gi|2622527|gb|AAB85892.1| ATP-dependent RNA helicase, eIF-4A family [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 738
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 121/221 (54%), Gaps = 21/221 (9%)
Query: 38 ALENLVTYGLRSFYNNLVEV-SKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWS 96
ALE L T G+R + L+ + K+ + L D D + + + MS
Sbjct: 292 ALELLETQGIRPLHQYLLRLKEKKTKAAKGLLADPDFTRAMHLTRRAM----MS---GVE 344
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K RL EIL+ KG+ ++I+F +R + EI+ K + A F GQ+
Sbjct: 345 HPKLDRLMEILKREL-----KGDEARIIVFTQFRDTLEEIYQRCK--REGINAVKFYGQN 397
Query: 157 S-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q++I+K FR G + L++TSV EEG+DI +DLV+ ++ S I+M+Q
Sbjct: 398 SRSGEKGLTQKQQRDIIKSFRMGNHDVLLSTSVAEEGIDIPSVDLVVMYEPVPSEIRMIQ 457
Query: 212 RLGRTGRKRNGRCVILLTQ-GREAHNFQTSMQTCKSYVEKI 251
R GRTGRKR GR V+L+T+ R+ + +S++ +S E +
Sbjct: 458 RRGRTGRKRKGRMVVLITEKTRDEAYYYSSIRKERSMKENL 498
>gi|448508975|ref|ZP_21615651.1| Hef nuclease [Halorubrum distributum JCM 9100]
gi|448517616|ref|ZP_21617190.1| Hef nuclease [Halorubrum distributum JCM 10118]
gi|445696998|gb|ELZ49075.1| Hef nuclease [Halorubrum distributum JCM 9100]
gi|445705831|gb|ELZ57719.1| Hef nuclease [Halorubrum distributum JCM 10118]
Length = 825
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L ++ GE + I+F R D + L + AS F
Sbjct: 350 HPKFSKARILLAETLGING--GE--RAILFTESR-------DTAEALVEFLSASFDVRKF 398
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q +Q+E + +F+ GEF L++TSV EEGLD+ E+DLV ++ + I
Sbjct: 399 VGQGDKEGSDGMSQTQQQETLDEFKNGEFEVLVSTSVAEEGLDVPEVDLVCFYEPVPTAI 458
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ G+ V+L+ +
Sbjct: 459 RSIQRKGRTGRQAEGKVVVLMAE 481
>gi|448426589|ref|ZP_21583438.1| Hef nuclease [Halorubrum terrestre JCM 10247]
gi|445679469|gb|ELZ31936.1| Hef nuclease [Halorubrum terrestre JCM 10247]
Length = 825
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L ++ GE + I+F R D + L + AS F
Sbjct: 350 HPKFSKARILLAETLGING--GE--RAILFTESR-------DTAEALVEFLSASFDVRKF 398
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q +Q+E + +F+ GEF L++TSV EEGLD+ E+DLV ++ + I
Sbjct: 399 VGQGDKEGSDGMSQTQQQETLDEFKNGEFEVLVSTSVAEEGLDVPEVDLVCFYEPVPTAI 458
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ G+ V+L+ +
Sbjct: 459 RSIQRKGRTGRQAEGKVVVLMAE 481
>gi|448484173|ref|ZP_21605958.1| Hef nuclease [Halorubrum arcis JCM 13916]
gi|445820346|gb|EMA70172.1| Hef nuclease [Halorubrum arcis JCM 13916]
Length = 825
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L ++ GE + I+F R D + L + AS F
Sbjct: 350 HPKFSKARILLAETLGING--GE--RAILFTESR-------DTAEALVEFLSASFDVRKF 398
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q +Q+E + +F+ GEF L++TSV EEGLD+ E+DLV ++ + I
Sbjct: 399 VGQGDKEGSDGMSQTQQQETLDEFKNGEFEVLVSTSVAEEGLDVPEVDLVCFYEPVPTAI 458
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ G+ V+L+ +
Sbjct: 459 RSIQRKGRTGRQAEGKVVVLMAE 481
>gi|448451900|ref|ZP_21593072.1| Hef nuclease [Halorubrum litoreum JCM 13561]
gi|445810116|gb|EMA60148.1| Hef nuclease [Halorubrum litoreum JCM 13561]
Length = 825
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L ++ GE + I+F R D + L + AS F
Sbjct: 350 HPKFSKARILLAETLGING--GE--RAILFTESR-------DTAEALVEFLSASFDVRKF 398
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q +Q+E + +F+ GEF L++TSV EEGLD+ E+DLV ++ + I
Sbjct: 399 VGQGDKEGSDGMSQTQQQETLDEFKNGEFEVLVSTSVAEEGLDVPEVDLVCFYEPVPTAI 458
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ G+ V+L+ +
Sbjct: 459 RSIQRKGRTGRQAEGKVVVLMAE 481
>gi|448475812|ref|ZP_21603167.1| Hef nuclease [Halorubrum aidingense JCM 13560]
gi|445816030|gb|EMA65939.1| Hef nuclease [Halorubrum aidingense JCM 13560]
Length = 825
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ- 155
H KF + R +L ++ GE + I+F R + + L + K FVGQ
Sbjct: 350 HPKFSKARILLAETLGIN--DGE--RAILFTESRDTAEALVEFLSTSFAVRK---FVGQG 402
Query: 156 ----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G++Q++Q+E + +F+AG F L++TSV EEGLD+ E+DLV ++ + I+ +Q
Sbjct: 403 DKEGSDGMSQKQQQETLDEFKAGAFEVLVSTSVAEEGLDVPEVDLVCFYEPVPTAIRSIQ 462
Query: 212 RLGRTGRKRNGRCVILLTQ 230
R GRTGR+ G+ V+L+ +
Sbjct: 463 RKGRTGRQAEGQVVVLMAE 481
>gi|296109929|ref|YP_003616878.1| DEAD/DEAH box helicase domain protein [methanocaldococcus infernus
ME]
gi|295434743|gb|ADG13914.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus infernus
ME]
Length = 770
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 92/159 (57%), Gaps = 12/159 (7%)
Query: 86 INIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEP 145
+N++ S H K+ +L E+++S EK + ++I+FA YR V +I +L+ +
Sbjct: 320 VNLLKS-LNVEHPKYPKLLELIKSIL----EKNKDERIIVFAQYRDTVDKIVSLLE--KN 372
Query: 146 MVKASMFVGQSS----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFD 201
+KA F+GQS G++Q++Q E +++F+ E L++TSV EEG+DI ++ VI F+
Sbjct: 373 GIKAIKFIGQSCRDGKGMSQKQQVEAIERFKR-EGQVLVSTSVSEEGIDIPAVNYVIFFE 431
Query: 202 AQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
S I+ +QR GR R G C IL+++G + S
Sbjct: 432 PVPSEIRTIQRRGRAMRGEGGTCYILISKGTSDEAYYWS 470
>gi|448441595|ref|ZP_21589202.1| Hef nuclease [Halorubrum saccharovorum DSM 1137]
gi|445688631|gb|ELZ40882.1| Hef nuclease [Halorubrum saccharovorum DSM 1137]
Length = 815
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 20/143 (13%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM----F 152
H KF + R +L ++ E + I+F R D + L + AS F
Sbjct: 350 HPKFSKARILLAETLGIN----EGERAILFTESR-------DTAEALVEFLSASFDVRKF 398
Query: 153 VGQ-----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
VGQ S G++Q +Q+E + +F+ G F L++TSV EEGLD+ E+DLV ++ + I
Sbjct: 399 VGQGDKEGSDGMSQTQQQETLDEFKDGAFEVLVSTSVAEEGLDVPEVDLVCFYEPVPTAI 458
Query: 208 KMVQRLGRTGRKRNGRCVILLTQ 230
+ +QR GRTGR+ G+ V+L+ +
Sbjct: 459 RSIQRKGRTGRQAEGKVVVLMAE 481
>gi|432329297|ref|YP_007247441.1| ERCC4-like helicase [Aciduliprofundum sp. MAR08-339]
gi|432136006|gb|AGB05275.1| ERCC4-like helicase [Aciduliprofundum sp. MAR08-339]
Length = 753
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 111/208 (53%), Gaps = 27/208 (12%)
Query: 38 ALENLVTYGLRSFYNNLVEVSKEDGS------CPILGKDN---DLQNLLQQLKPKLDINI 88
ALE L T G S YN L+ + +E S L +D ++ + +++ ++D
Sbjct: 289 ALEYLETQGFESCYNYLMRIIEEGNSKGGSKAARTLVRDERFIEIIRVARRISERMD--- 345
Query: 89 MSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVK 148
+ K L+ I+ + E ++I+F ++R + D L + P V+
Sbjct: 346 -----KMDNPKLNALKTIVRKEIAANPE----IRIIVFTHFRETAQIVADSLNEV-PNVR 395
Query: 149 ASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQ 203
A FVGQ+S G+ Q+EQ EI+++F+ GE+N L+ATSV EEGLDI DLVI ++
Sbjct: 396 AIRFVGQASKGEDRGLKQREQVEIVERFKRGEYNVLVATSVAEEGLDIPATDLVIFYEPV 455
Query: 204 KSPIKMVQRLGRTGRKRNGRCVILLTQG 231
S I+ +QR GRTGR R G+ +IL +G
Sbjct: 456 PSEIRSIQRRGRTGRTRLGKVIILTIKG 483
>gi|374635020|ref|ZP_09706625.1| helicase domain protein [Methanotorris formicicus Mc-S-70]
gi|373563422|gb|EHP89616.1| helicase domain protein [Methanotorris formicicus Mc-S-70]
Length = 753
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 85/139 (61%), Gaps = 11/139 (7%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H KF +L +I+E + + ++ K+I+FA YR V +I +L E +KA FVGQS
Sbjct: 332 HPKFEKLIDIIEEILKENNDE----KIIVFAQYRDTVDKIVRLLN--ERGIKAIRFVGQS 385
Query: 157 S----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
+ G++Q+EQ + +++F+ + N L++TSV EEG+DI ++ VI ++ S I+ +QR
Sbjct: 386 NREGKGMSQKEQIKALEEFKK-DGNVLVSTSVSEEGIDISTVNYVIFYEPVPSEIRFIQR 444
Query: 213 LGRTGRKRNGRCVILLTQG 231
GR R G +IL+ +G
Sbjct: 445 RGRAARGEGGMVIILIAKG 463
>gi|304313782|ref|YP_003848929.1| helicase [Methanothermobacter marburgensis str. Marburg]
gi|302587241|gb|ADL57616.1| predicted helicase [Methanothermobacter marburgensis str. Marburg]
Length = 736
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 99/161 (61%), Gaps = 13/161 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K RL EIL +G +++I+F +R + EI+ + + + A F GQ+
Sbjct: 345 HPKLDRLIEILRKEL-----EGGDSRIIVFTQFRDTLEEIYQ--RCVREGINAVKFYGQN 397
Query: 157 S-----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S G+TQ++Q++I+K FR G + LI+TSV EEG+DI +DLV+ ++ S I+M+Q
Sbjct: 398 SRSGEKGLTQKQQRDIIKSFRMGNHDVLISTSVAEEGIDIPSVDLVVMYEPVPSEIRMIQ 457
Query: 212 RLGRTGRKRNGRCVILLTQ-GREAHNFQTSMQTCKSYVEKI 251
R GRTGR+R+GR V+L+T+ R+ + +S++ K+ E +
Sbjct: 458 RRGRTGRRRSGRMVVLMTEKTRDEAYYYSSIRKEKTMKESL 498
>gi|261403123|ref|YP_003247347.1| Hef nuclease [Methanocaldococcus vulcanius M7]
gi|261370116|gb|ACX72865.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus vulcanius
M7]
Length = 783
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 95/166 (57%), Gaps = 11/166 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS-----GVTQQEQKEIMKKFRAGEF 176
++IIFA YR V +I ++L E +KA F+GQ+S G+TQ+EQ + ++KF+ E
Sbjct: 354 RIIIFAQYRDTVEKIVNLLNQNE--IKAIKFIGQASKEKGKGMTQKEQIKAIEKFKK-EG 410
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHN 236
+ L++TSV EEG+DI ++ +I ++ S I+ +QR GR R G IL+ +G
Sbjct: 411 SVLVSTSVSEEGIDIPSVNYIIFYEPVPSEIRFIQRRGRAMRGEGGNVFILIAKGTTDEA 470
Query: 237 FQTSMQTCKSYVEKIINN--KSIYANLA-KNGPRMIPAHVTPRIKC 279
+ S + +++I+ N K + LA KN + I +++T I+
Sbjct: 471 YYKSALYKEKGMKQILKNMCKILNKKLAEKNKEKKIESNITSEIQS 516
>gi|150399457|ref|YP_001323224.1| Hef nuclease [Methanococcus vannielii SB]
gi|150012160|gb|ABR54612.1| ERCC4 domain protein [Methanococcus vannielii SB]
Length = 776
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 108/198 (54%), Gaps = 24/198 (12%)
Query: 38 ALENLVTYGLRSFYNNLVE-VSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWS 96
A+E L T G +F N + +S+ S + D+ +++ L +INI
Sbjct: 282 AIEMLETQGKSTFLNYYQKMLSQNTKSAKSITLDHRFLQVVENLN---EINI-------E 331
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K+ +L EI + + K+IIFA YR V +I ++L + ++A FVGQS
Sbjct: 332 HPKYDKLLEITKEILE------QNEKMIIFAQYRDTVQKIVELLS--KHNIEAITFVGQS 383
Query: 157 S----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
+ G++Q+EQ + +++F++ + N L++TSV EEG+DI ++ V+ ++ S I+M+QR
Sbjct: 384 NKDGKGMSQKEQIKAIERFKS-DANVLVSTSVSEEGIDISSVNYVLFYEPVPSEIRMIQR 442
Query: 213 LGRTGRKRNGRCVILLTQ 230
GR R G ++L+ +
Sbjct: 443 RGRAARGEGGEVIVLIAE 460
>gi|289192001|ref|YP_003457942.1| helicase domain protein [Methanocaldococcus sp. FS406-22]
gi|288938451|gb|ADC69206.1| helicase domain protein [Methanocaldococcus sp. FS406-22]
Length = 783
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 86/149 (57%), Gaps = 7/149 (4%)
Query: 116 EKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS----GVTQQEQKEIMKKF 171
+K E ++IIFA YR V +I ++L + +KA F+GQ++ G++Q+EQ E ++KF
Sbjct: 348 QKNEDERIIIFAQYRDTVEKIVNLLT--QNGIKAIRFIGQANKEGKGMSQKEQIEAIEKF 405
Query: 172 RAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
+ E + L++TSV EEG+DI ++ +I ++ S I+ +QR GR R G+ +L+ +G
Sbjct: 406 KK-EGSVLVSTSVSEEGIDIPTVNYIIFYEPVPSEIRFIQRRGRAMRGEGGKVYVLIAKG 464
Query: 232 REAHNFQTSMQTCKSYVEKIINNKSIYAN 260
+ S + +++++ N N
Sbjct: 465 TADEAYYRSALYREKEMKRLLKNMCYLLN 493
>gi|41615176|ref|NP_963674.1| Hef nuclease [Nanoarchaeum equitans Kin4-M]
gi|40068900|gb|AAR39235.1| NEQ387 [Nanoarchaeum equitans Kin4-M]
Length = 667
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 125 IFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSV 184
+FA V +I ++L + +KA F G+ +TQ++Q E + KFRA +N L+A+SV
Sbjct: 321 VFAQLTDTVMQITELLN--KNNIKAVAFTGKKL-MTQKKQIETLDKFRANIYNVLVASSV 377
Query: 185 GEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
EEGLDI ++DLVI ++ S I+ +QR GRTGR G +IL ++
Sbjct: 378 AEEGLDIPKVDLVIFYEPIPSAIRAIQRKGRTGRLNYGEVIILYSK 423
>gi|312137159|ref|YP_004004496.1| dead/deah box helicase domain-containing protein [Methanothermus
fervidus DSM 2088]
gi|311224878|gb|ADP77734.1| DEAD/DEAH box helicase domain protein [Methanothermus fervidus DSM
2088]
Length = 730
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 86/136 (63%), Gaps = 8/136 (5%)
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEI 167
L E KVI+F +R V +I K E + + F GQ G++Q+EQKEI
Sbjct: 358 LKKEIANKNKVIVFTQFRDSVEQIHK--KCQENNISSVKFYGQRGRDGEKGLSQKEQKEI 415
Query: 168 MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
+KKF+AG ++ LI+TSV EEG+DI +D VI ++ S I+M+QR GRTGRKR G+ ++L
Sbjct: 416 IKKFKAGVYDVLISTSVAEEGIDIPAVDTVILYEPVPSEIRMIQRRGRTGRKRKGKMIVL 475
Query: 228 LTQG-REAHNFQTSMQ 242
+++G R+ + +S++
Sbjct: 476 ISEGTRDEAYYWSSIR 491
>gi|77024937|gb|ABA61364.1| ATP-dependent RNA helicase [uncultured marine group II
euryarchaeote HF70_59C08]
Length = 878
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGE 175
+++I+FAN+R V EI VL +E V FVGQ SSG++Q+ Q E + FR+GE
Sbjct: 365 SRIIVFANFRDTVDEISRVLSDVENAVP-QRFVGQASREGSSGMSQKMQLESLDTFRSGE 423
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
N L+ATSVGEEGLD+ DLVI ++ S I+ +
Sbjct: 424 ANVLVATSVGEEGLDVPNADLVIFYEPVGSEIRTI 458
>gi|2127880|pir||H64487 eIF-4A family probable ATP-dependent RNA helicase homolog -
Methanococcus jannaschii
Length = 784
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 76/120 (63%), Gaps = 7/120 (5%)
Query: 116 EKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS----GVTQQEQKEIMKKF 171
EK + ++IIFA YR V +I ++L + +KA F+GQ++ G++Q+EQ E +++F
Sbjct: 354 EKNKDERIIIFAQYRDTVEKIVNLLT--QNGIKAIRFIGQANKEGKGMSQKEQIEAIERF 411
Query: 172 RAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
+ E + L++TSV EEG+DI ++ +I ++ S I+ +QR GR R G+ +L+ +G
Sbjct: 412 KK-EGSVLVSTSVSEEGIDIPSVNYIIFYEPVPSEIRFIQRRGRAMRGEGGKVYVLIAKG 470
>gi|15669699|ref|NP_248512.1| Hef nuclease [Methanocaldococcus jannaschii DSM 2661]
gi|3915469|sp|Q58900.2|Y1505_METJA RecName: Full=Putative ATP-dependent RNA helicase MJ1505
gi|2826423|gb|AAB99518.1| ATP dependent RNA helicase, putative [Methanocaldococcus jannaschii
DSM 2661]
Length = 778
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 76/120 (63%), Gaps = 7/120 (5%)
Query: 116 EKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS----GVTQQEQKEIMKKF 171
EK + ++IIFA YR V +I ++L + +KA F+GQ++ G++Q+EQ E +++F
Sbjct: 348 EKNKDERIIIFAQYRDTVEKIVNLLT--QNGIKAIRFIGQANKEGKGMSQKEQIEAIERF 405
Query: 172 RAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
+ E + L++TSV EEG+DI ++ +I ++ S I+ +QR GR R G+ +L+ +G
Sbjct: 406 KK-EGSVLVSTSVSEEGIDIPSVNYIIFYEPVPSEIRFIQRRGRAMRGEGGKVYVLIAKG 464
>gi|402897212|ref|XP_003911664.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Papio anubis]
Length = 925
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K LR IL+ + L+ E T I+F
Sbjct: 578 GFDETEQDLTQRFEEKLQELESVSRDPSNENPKLEDLRFILQEEYHLNPE----TITILF 633
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I+ F+ G+ N
Sbjct: 634 VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKVNGDHNI 693
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 752
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ + R K LHI +++ K KP
Sbjct: 753 INM-----YKEKMMNDSILRLQTWDEA--------VFREKILHIQTHEKLIRDSQEKPKP 799
Query: 299 ---KENEK 303
KEN+K
Sbjct: 800 VPDKENKK 807
>gi|256810024|ref|YP_003127393.1| Hef nuclease [Methanocaldococcus fervens AG86]
gi|256793224|gb|ACV23893.1| ERCC4 domain protein [Methanocaldococcus fervens AG86]
Length = 767
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 76/120 (63%), Gaps = 7/120 (5%)
Query: 116 EKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS----GVTQQEQKEIMKKF 171
EK + ++I+FA YR V +I ++L + +KA F+GQ++ G++Q++Q E ++KF
Sbjct: 348 EKNKDERIIVFAQYRDTVEKIVNLLH--QNGIKAIRFIGQANKEGKGMSQKQQIEAIEKF 405
Query: 172 RAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
+ E + L++TSV EEG+DI ++ +I ++ S I+ +QR GR R G+ IL+ +G
Sbjct: 406 KR-EGSVLVSTSVSEEGIDIPTVNYIIFYEPVPSEIRFIQRRGRAMRGEGGKAYILIAKG 464
>gi|397520027|ref|XP_003830149.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 2 [Pan
paniscus]
Length = 854
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 120/248 (48%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 507 GFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 562
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K S+ G Q++G+T QK I+ F+A G+ N
Sbjct: 563 VKTRALVDALKNWIEGNPKLSFLKPSILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 622
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 623 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 681
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ + R K LHI ++ K KP
Sbjct: 682 INM-----YKEKMMNDSILRLQTWDEA--------VFREKILHIQTHEKFIRDSQEKPKP 728
Query: 299 ---KENEK 303
KEN+K
Sbjct: 729 VPDKENKK 736
>gi|397520025|ref|XP_003830148.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 1 [Pan
paniscus]
Length = 925
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 120/248 (48%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 578 GFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 633
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K S+ G Q++G+T QK I+ F+A G+ N
Sbjct: 634 VKTRALVDALKNWIEGNPKLSFLKPSILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 752
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ + R K LHI ++ K KP
Sbjct: 753 INM-----YKEKMMNDSILRLQTWDEA--------VFREKILHIQTHEKFIRDSQEKPKP 799
Query: 299 ---KENEK 303
KEN+K
Sbjct: 800 VPDKENKK 807
>gi|150400569|ref|YP_001324335.1| Hef nuclease [Methanococcus aeolicus Nankai-3]
gi|150013272|gb|ABR55723.1| DEAD/DEAH box helicase domain protein [Methanococcus aeolicus
Nankai-3]
Length = 808
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 14/142 (9%)
Query: 126 FANYRVVVAEIFDVLKPLEPMVKASMFVGQSS----GVTQQEQKEIMKKFRAG-EFNTLI 180
FA YR V +I ++L ++A FVGQS+ G++Q++Q E ++KF+ N L+
Sbjct: 383 FAQYRDTVEKIVNLLNS--NGIQAIPFVGQSNKDGKGMSQKKQIEAVEKFKNDPAVNVLV 440
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
+TSV EEG+DI ++ VI ++ S I+ +QR GR R G C++L+T+ + S
Sbjct: 441 STSVSEEGIDIMSVNFVIFYEPVPSEIRFIQRRGRASRGEGGECIVLITKDSRDEGYYWS 500
Query: 241 -------MQTCKSYVEKIINNK 255
M+ ++KI+N K
Sbjct: 501 ALNKERKMKRILKDMQKILNEK 522
>gi|355567708|gb|EHH24049.1| Putative ATP-dependent RNA helicase DDX58 [Macaca mulatta]
Length = 925
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 578 GFDETEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 633
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I++ F+ G+ N
Sbjct: 634 VKTRALVDALKNWIEGNPKLHFLKPGILTGRGKTNQNTGMTLPAQKCILEAFKVNGDHNI 693
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 752
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ ++ R K LHI +++ K KP
Sbjct: 753 INM-----YKEKMMNDCILHLQTWDEA--------VFREKILHIQTHEKLIRDSQEKPKP 799
Query: 299 ---KENEK 303
KEN+K
Sbjct: 800 VPDKENKK 807
>gi|355753280|gb|EHH57326.1| Putative ATP-dependent RNA helicase DDX58 [Macaca fascicularis]
Length = 925
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 578 GFDETEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 633
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I++ F+ G+ N
Sbjct: 634 VKTRALVDALKNWIEGNPKLHFLKPGILTGRGKTNQNTGMTLPAQKCILEAFKVNGDHNI 693
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 752
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ ++ R K LHI +++ K KP
Sbjct: 753 INM-----YKEKMMNDCILHLQTWDEA--------VFREKILHIQTHEKLIRDSQEKPKP 799
Query: 299 ---KENEK 303
KEN+K
Sbjct: 800 VPDKENKK 807
>gi|302693114|ref|XP_003036236.1| hypothetical protein SCHCODRAFT_31237 [Schizophyllum commune H4-8]
gi|300109932|gb|EFJ01334.1| hypothetical protein SCHCODRAFT_31237, partial [Schizophyllum
commune H4-8]
Length = 1342
Score = 75.5 bits (184), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 9/152 (5%)
Query: 113 LHAEKGETTKVIIFANYRVV---VAEIFDVLKPLEPMVKASMFVGQSSGVTQQE----QK 165
L A+ T++ I+F + R V +A I L L+ +V+ + F+GQ+ G+ + Q+
Sbjct: 349 LLAQDLATSRGIVFVDQRQVALCLALILPRLSRLQGLVRCASFIGQNPGIDGPKAIGSQR 408
Query: 166 EIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV 225
++ +FR+GE N LIATSV EEG D DLV+ FD + + +Q GR R ++ V
Sbjct: 409 DVASQFRSGEVNLLIATSVAEEGHDFQACDLVVRFDPLQHLVGYLQSRGR-ARNKSSMFV 467
Query: 226 ILLTQGREAHNFQTS-MQTCKSYVEKIINNKS 256
++L +G E + + C+ + ++ N +S
Sbjct: 468 VMLPEGDEPSRAKYDFFRKCEPQLREVYNTRS 499
>gi|111154107|ref|NP_001036133.1| probable ATP-dependent RNA helicase DDX58 [Macaca mulatta]
gi|110340386|gb|ABG67971.1| retinoic acid-inducible protein I [Macaca mulatta]
gi|380811238|gb|AFE77494.1| putative ATP-dependent RNA helicase DDX58 [Macaca mulatta]
gi|383412499|gb|AFH29463.1| putative ATP-dependent RNA helicase DDX58 [Macaca mulatta]
Length = 925
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 578 GFDETEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 633
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I++ F+ G+ N
Sbjct: 634 VKTRALVDALKNWIEGNPKLHFLKPGILTGRGKTNQNTGMTLPAQKCILEAFKVNGDHNI 693
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 752
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ ++ R K LHI +++ K KP
Sbjct: 753 INM-----YKEKMMNDCILHLQTWDEA--------VFREKILHIQTHEKLIRDSQEKPKP 799
Query: 299 ---KENEK 303
KEN+K
Sbjct: 800 VPDKENKK 807
>gi|336122551|ref|YP_004577326.1| helicase domain-containing protein [Methanothermococcus okinawensis
IH1]
gi|334857072|gb|AEH07548.1| helicase domain-containing protein [Methanothermococcus okinawensis
IH1]
Length = 797
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 9/121 (7%)
Query: 126 FANYRVVVAEIFDVLKPLEPM-VKASMFVGQSS----GVTQQEQKEIMKKFRAGE-FNTL 179
FA YR V +I +K LE + A FVGQS+ G++Q++Q E ++KF+ + N L
Sbjct: 368 FAQYRDTVDKI---VKTLESNGINAIPFVGQSNKDGKGMSQKKQVEAVEKFKNDDNINVL 424
Query: 180 IATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
++TSV EEG+DI ++ VI ++ S I+ +QR GR R G C+IL+T+ +
Sbjct: 425 VSTSVSEEGIDIISVNNVIFYEPVPSEIRFIQRRGRASRGEGGECIILITKNSRDEGYYW 484
Query: 240 S 240
S
Sbjct: 485 S 485
>gi|6808358|emb|CAB70840.1| hypothetical protein [Homo sapiens]
Length = 398
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 51 GFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 106
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I+ F+A G+ N
Sbjct: 107 VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 166
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 167 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 225
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ + R K LHI ++ K KP
Sbjct: 226 INM-----YKEKMMNDSILRLQTWDEA--------VFREKILHIQTHEKFIRDSQEKPKP 272
Query: 299 ---KENEK 303
KEN+K
Sbjct: 273 VPDKENKK 280
>gi|114624054|ref|XP_001156498.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 2 [Pan
troglodytes]
gi|193785120|dbj|BAG54273.1| unnamed protein product [Homo sapiens]
Length = 854
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 507 GFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 562
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I+ F+A G+ N
Sbjct: 563 VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 622
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 623 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 681
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ + R K LHI ++ K KP
Sbjct: 682 INM-----YKEKMMNDSILRLQTWDEA--------VFREKILHIQTHEKFIRDSQEKPKP 728
Query: 299 ---KENEK 303
KEN+K
Sbjct: 729 VPDKENKK 736
>gi|407943766|pdb|4AY2|A Chain A, Capturing 5' Tri-Phosphorylated Rna Duplex By Rig-I
Length = 687
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 340 GFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 395
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I+ F+A G+ N
Sbjct: 396 VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 455
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 456 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 514
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ + R K LHI ++ K KP
Sbjct: 515 INM-----YKEKMMNDSILRLQTWDEA--------VFREKILHIQTHEKFIRDSQEKPKP 561
Query: 299 ---KENEK 303
KEN+K
Sbjct: 562 VPDKENKK 569
>gi|354459477|pdb|2YKG|A Chain A, Structural Insights Into Rna Recognition By Rig-I
Length = 696
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 349 GFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 404
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I+ F+A G+ N
Sbjct: 405 VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 464
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 465 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 523
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ + R K LHI ++ K KP
Sbjct: 524 INM-----YKEKMMNDSILRLQTWDEA--------VFREKILHIQTHEKFIRDSQEKPKP 570
Query: 299 ---KENEK 303
KEN+K
Sbjct: 571 VPDKENKK 578
>gi|27881482|ref|NP_055129.2| probable ATP-dependent RNA helicase DDX58 [Homo sapiens]
gi|114624048|ref|XP_001156662.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 4 [Pan
troglodytes]
gi|81170421|sp|O95786.2|DDX58_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX58; AltName:
Full=DEAD box protein 58; AltName: Full=RIG-I-like
receptor 1; Short=RLR-1; AltName: Full=Retinoic
acid-inducible gene 1 protein; Short=RIG-1; AltName:
Full=Retinoic acid-inducible gene I protein; Short=RIG-I
gi|119578952|gb|EAW58548.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, isoform CRA_b [Homo
sapiens]
gi|124376888|gb|AAI32787.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Homo sapiens]
gi|168278056|dbj|BAG11006.1| ATP-dependent RNA helicase DDX58 [synthetic construct]
gi|187952415|gb|AAI36611.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Homo sapiens]
gi|410218244|gb|JAA06341.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Pan troglodytes]
gi|410302632|gb|JAA29916.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Pan troglodytes]
gi|410336301|gb|JAA37097.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Pan troglodytes]
Length = 925
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 578 GFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 633
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I+ F+A G+ N
Sbjct: 634 VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 752
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ + R K LHI ++ K KP
Sbjct: 753 INM-----YKEKMMNDSILRLQTWDEA--------VFREKILHIQTHEKFIRDSQEKPKP 799
Query: 299 ---KENEK 303
KEN+K
Sbjct: 800 VPDKENKK 807
>gi|347447734|pdb|3TMI|A Chain A, Structural Basis For Rna Recognition And Activation Of
Rig-I
Length = 695
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 348 GFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 403
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I+ F+A G+ N
Sbjct: 404 VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 463
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 464 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 522
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ + R K LHI ++ K KP
Sbjct: 523 INM-----YKEKMMNDSILRLQTWDEA--------VFREKILHIQTHEKFIRDSQEKPKP 569
Query: 299 ---KENEK 303
KEN+K
Sbjct: 570 VPDKENKK 577
>gi|325297782|ref|YP_004257699.1| DEAD/DEAH box helicase [Bacteroides salanitronis DSM 18170]
gi|324317335|gb|ADY35226.1| DEAD/DEAH box helicase domain protein [Bacteroides salanitronis DSM
18170]
Length = 418
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 17/172 (9%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQ 164
I+ES FR + E +VIIFA+ ++ V E+ LK L+ + VG+ S + Q ++
Sbjct: 234 IIESLFR----QQEPERVIIFASSKLKVKEVTKALKRLK------LNVGEMHSDLEQSQR 283
Query: 165 KEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRC 224
EIM +FR G N L+AT + G+DI +I LVI +D V R+GRT R N C
Sbjct: 284 DEIMHEFRNGRINMLVATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGC 343
Query: 225 VILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPR 276
I + N QT + + ++ K I + A L + P P H + R
Sbjct: 344 AITFV----SENEQTRFKQIEDFLGKEIYKLPVPAELGE-APVYAP-HTSSR 389
>gi|193785778|dbj|BAG51213.1| unnamed protein product [Homo sapiens]
Length = 447
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 118/248 (47%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + K L IL+ + L+ E T I+F
Sbjct: 100 GFDEIEQDLTQRFEEKLQELESVSRDPSNEDPKLEDLCFILQEEYHLNPE----TITILF 155
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I+ F+A G+ N
Sbjct: 156 VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 215
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 216 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 274
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ + R K LHI ++ K KP
Sbjct: 275 INM-----YKEKMMNDSILRLQTWDEA--------VFREKILHIQTHEKFIRDSQEKPKP 321
Query: 299 ---KENEK 303
KEN+K
Sbjct: 322 VPDKENKK 329
>gi|299755161|ref|XP_001828472.2| DEAH family protein [Coprinopsis cinerea okayama7#130]
gi|298411096|gb|EAU93305.2| DEAH family protein [Coprinopsis cinerea okayama7#130]
Length = 1197
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 135/300 (45%), Gaps = 75/300 (25%)
Query: 43 VTYGLRSFYNNLVEVSKEDGSC---PILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLK 99
+T + + Y+ L E+ K DG PI D D + ++ +L + ++++ SH K
Sbjct: 408 LTGCISACYDYLDEIRKIDGVGDKKPIWKDDPDFKAIMAKL------DEIAAQGGASHPK 461
Query: 100 FIRLREILESHF--RL------HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM 151
+L++IL ++F R+ + E + + VI+F++YR VV EI L +P+++A+
Sbjct: 462 MEKLKDILINYFGSRMQDPDADNPENADRSCVIVFSSYRAVVEEIVKELDGHKPLIRAAA 521
Query: 152 FVGQSS------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKS 205
FVGQ++ G+TQ++Q+ + + R G
Sbjct: 522 FVGQATDKKGRKGLTQKKQQAVQRFGRTG------------------------------- 550
Query: 206 PIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNG 265
RKR+G +LL + RE N T+ V+K+I N +Y L +
Sbjct: 551 ------------RKRSGEVHLLLAEAREEANMDTAKANYME-VQKVITNGDLY-ELYCDV 596
Query: 266 PRMIPAHVTPRIKCLHIVVKDRVTP---AKPSKKKPKENEKANKKSKKKLETDGNSEPAG 322
PR++P ++ P +C+ V++ + P P + PK + +K+ + G + P G
Sbjct: 597 PRLLPDNIRP--ECVEKVME--IQPYVREAPFTRPPKNTDGKRAPKRKRNDDPGRNIPPG 652
>gi|426361539|ref|XP_004047964.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Gorilla
gorilla gorilla]
Length = 890
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 30/248 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 543 GFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 598
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I+ F+A G+ N
Sbjct: 599 VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 658
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 659 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 717
Query: 239 TSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP 298
+M Y EK++N+ + R K LHI ++ K KP
Sbjct: 718 INM-----YKEKMMNDSILRLQTWDEA--------VFREKILHIQTHEKFIRDSQEKPKP 764
Query: 299 ---KENEK 303
KEN+K
Sbjct: 765 VPDKENKK 772
>gi|330913942|ref|XP_003296428.1| hypothetical protein PTT_06534 [Pyrenophora teres f. teres 0-1]
gi|311331414|gb|EFQ95479.1| hypothetical protein PTT_06534 [Pyrenophora teres f. teres 0-1]
Length = 1572
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 106 ILESHFRLH--AEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSSGVTQQ 162
+L+ H+ LH E+ + + I+F R + + L P ++ S+ VG ++ + +Q
Sbjct: 450 VLKLHYWLHRYYERSDEARCIVFVEQRQTARLLQLIFASLGGPNLRCSVLVGVNNRINEQ 509
Query: 163 E-----QKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
Q + KFR GE N L ATSV EEGLDI + +LV+ FD ++ I VQ GR
Sbjct: 510 NISLRNQILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIAYVQSRGR-A 568
Query: 218 RKRNGRCVILLTQGREAH 235
R RN + + +L +G H
Sbjct: 569 RHRNSKYLHMLEEGNHDH 586
>gi|405973602|gb|EKC38304.1| Interferon-induced helicase C domain-containing protein 1
[Crassostrea gigas]
Length = 1260
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 12/139 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVG-- 154
K + LR ++ +F+ + + +VI+F R +V I +K E + + FVG
Sbjct: 932 KLMALRHMIGDYFKENPD----ARVIVFVKTRELVKAIETYMKETEELRILNPIQFVGVQ 987
Query: 155 ---QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
+S G+T+ EQ EI++ F+ G +IATSV EEGLDI + LV+ +D + I MVQ
Sbjct: 988 ANKESGGMTKVEQDEILELFKEGNHKVIIATSVAEEGLDIQKCSLVVRYDHVTNEIAMVQ 1047
Query: 212 RLGRTGRKRNGRCVILLTQ 230
GR GR + + V+L ++
Sbjct: 1048 SRGR-GRAEDSKYVVLASE 1065
>gi|406356427|gb|AFS34610.1| LGP2 [Ictalurus punctatus]
Length = 677
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 12/158 (7%)
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKP 142
K+++ ++SE + + K RL+ L F K E ++ IIFA R + ++D ++
Sbjct: 337 KVELLQLASEASNENPKLERLQRTLVDQF-----KDENSRGIIFAKTREITRCLYDWVRT 391
Query: 143 LEPM----VKASMFVGQSSG---VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEID 195
+ ++A+ VG +G +TQ+EQ++ +K FR GE N LI+TSV EEGLDI E +
Sbjct: 392 NPELRRANIRAANLVGAGTGATHMTQREQRDTIKTFREGELNLLISTSVAEEGLDIPECN 451
Query: 196 LVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
+VI + + I Q GR K + V+ GRE
Sbjct: 452 VVIRYGLLTNEIAQQQASGRARAKNSVYSVVAKAGGRE 489
>gi|238499727|ref|XP_002381098.1| Dicer-like protein [Aspergillus flavus NRRL3357]
gi|220692851|gb|EED49197.1| Dicer-like protein [Aspergillus flavus NRRL3357]
Length = 694
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSSG--- 158
LR+ L +F E TK I+F R +FD+ LE P ++ + +G SG
Sbjct: 433 LRQKLIKYF----EHPTETKCIVFTQKRYTAKMLFDLFSTLEIPYLRPGVLIGVRSGDIV 488
Query: 159 ---VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
V+ ++Q + KFR+GE N L ATSV EEGLDI + +LVI FD + I+ VQ GR
Sbjct: 489 GMNVSFRQQFLALVKFRSGEINCLFATSVAEEGLDIPDCNLVIRFDLYNTLIQYVQSRGR 548
Query: 216 T 216
Sbjct: 549 A 549
>gi|4405795|gb|AAD19826.1| RNA helicase [Homo sapiens]
Length = 925
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 117/242 (48%), Gaps = 30/242 (12%)
Query: 74 QNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVV 132
Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F R +
Sbjct: 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILFVKTRAL 639
Query: 133 VAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNTLIATSV 184
V + + ++ P +K + G Q++G+T QK I+ F+A G+ N LIATSV
Sbjct: 640 VDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSV 699
Query: 185 GEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTC 244
+EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q +M
Sbjct: 700 ADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQINM--- 755
Query: 245 KSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKP---KEN 301
Y EK++N+ + R K LHI ++ K KP KEN
Sbjct: 756 --YKEKMMNDSILRLQTWDEA--------VFREKILHIQTHEKFIRDSQEKPKPVPDKEN 805
Query: 302 EK 303
+K
Sbjct: 806 KK 807
>gi|326922819|ref|XP_003207642.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Meleagris gallopavo]
Length = 1001
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 47 LRSFYNNLVE---VSKEDGSCPILGKDNDLQNLLQQL--KPKLDINIMSSEYAWSHLKFI 101
L +FY L +D P++ K ++ L L + K + ++ + + + K +
Sbjct: 618 LNNFYKELKRKKTAGSDDDEEPLVSKKDETDEFLMGLFHEKKKQLKELARKPEYDNEKLM 677
Query: 102 RLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG--- 154
+LR L F K E ++ IIF R + I D K E +KA +G
Sbjct: 678 KLRNTLMEEFT----KTEESRGIIFTKTRQSALALYHWIMDNPKFEEVGIKAHYLIGAGH 733
Query: 155 --QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
++ +TQ EQ+E++ KFR G N LIAT+V EEGLDI E ++VI + + I MVQ
Sbjct: 734 NSETKPMTQNEQREVIDKFRGGSINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQA 793
Query: 213 LGRT 216
GR
Sbjct: 794 RGRA 797
>gi|297684253|ref|XP_002819761.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 2
[Pongo abelii]
Length = 925
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 19/196 (9%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 578 GFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 633
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I+ F+A G N
Sbjct: 634 VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKANGNHNI 693
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L + Q
Sbjct: 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVIEKEQ 752
Query: 239 TSMQTCKSYVEKIINN 254
+M Y EK++N+
Sbjct: 753 INM-----YKEKMMND 763
>gi|83772763|dbj|BAE62891.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391869364|gb|EIT78563.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1374
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSSG--- 158
LR+ L +F E TK I+F R +FD+ LE P ++ + +G SG
Sbjct: 353 LRQKLIKYF----EHPTKTKCIVFTQKRYTAKMLFDLFSTLEIPYLRPGVLIGVRSGDIV 408
Query: 159 ---VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
V+ ++Q + KFR+GE N L ATSV EEGLDI + +LV+ FD + I+ VQ GR
Sbjct: 409 GMNVSFRQQFLALVKFRSGEINCLFATSVAEEGLDIPDCNLVVRFDLYNTLIQYVQSRGR 468
>gi|19343863|gb|AAH25508.1| Ifih1 protein [Mus musculus]
Length = 467
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR + F E+++ IIF R + I + K E VKA +G
Sbjct: 142 KLIKLRNTILEQF---TRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIG 198
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR GE N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 199 AGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 258
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 259 VQARGR-ARADESTYVLVTSSG 279
>gi|378727578|gb|EHY54037.1| RNA helicase/RNAse III [Exophiala dermatitidis NIH/UT8656]
Length = 1629
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 44/222 (19%)
Query: 30 HVTHSLASALENLVTY-----------GLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQ 78
H ++ S LE TY L+S + + D P L KDN
Sbjct: 366 HGITAIISKLERSSTYIHAIDDAGREAALKSVREAISVIENHDFGAPCLEKDN------- 418
Query: 79 QLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFD 138
+L PK+ ++L+ RL+E S T+ I+F R+ + D
Sbjct: 419 ELSPKV-----------AYLR-QRLKERYSSF--------PNTRAIVFVEQRLTAFALCD 458
Query: 139 VLKPLE-PMVKASMFVGQSS-GV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGE 193
+ + L+ P V+ + VG S G+ + ++Q+ ++KFR G N + ATSV EEG+DI +
Sbjct: 459 LFRVLDLPNVRPGLLVGISQKGIDSSSWKDQEVALEKFRVGTINLIFATSVAEEGIDIPQ 518
Query: 194 IDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
+LV+ FD K+PI+ +Q GR R + ++ +G+++H
Sbjct: 519 CNLVVRFDLYKTPIQYMQSRGR-ARMKGSVYAHMMEEGKQSH 559
>gi|317150438|ref|XP_001824024.2| dicer-like protein 1 [Aspergillus oryzae RIB40]
gi|158706453|sp|Q2U6C4.2|DCL1_ASPOR RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1523
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSSG--- 158
LR+ L +F E TK I+F R +FD+ LE P ++ + +G SG
Sbjct: 445 LRQKLIKYF----EHPTKTKCIVFTQKRYTAKMLFDLFSTLEIPYLRPGVLIGVRSGDIV 500
Query: 159 ---VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
V+ ++Q + KFR+GE N L ATSV EEGLDI + +LV+ FD + I+ VQ GR
Sbjct: 501 GMNVSFRQQFLALVKFRSGEINCLFATSVAEEGLDIPDCNLVVRFDLYNTLIQYVQSRGR 560
>gi|74142317|dbj|BAE31920.1| unnamed protein product [Mus musculus]
Length = 444
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR + F E+++ IIF R + I + K E VKA +G
Sbjct: 119 KLIKLRNTILEQF---TRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIG 175
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR GE N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 176 AGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 235
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 236 VQARGR-ARADESTYVLVTSSG 256
>gi|330798142|ref|XP_003287114.1| hypothetical protein DICPUDRAFT_54684 [Dictyostelium purpureum]
gi|325082892|gb|EGC36360.1| hypothetical protein DICPUDRAFT_54684 [Dictyostelium purpureum]
Length = 2341
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 120 TTKVIIFANYRVVVAEIFDVLK--PLEPMVKASMFVGQSS--GVTQQEQKEIMKKFRAGE 175
+ K+I+F R A + ++LK ++ + VGQS G++ +Q++I+KKFR G+
Sbjct: 628 SIKIIVFVESRAGAARLTELLKKEAFNDILNCKLLVGQSGDDGMSSHKQQKIIKKFRDGK 687
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
+++T+V EEG+DI E ++VIC+D+ S +VQR GR R N + +++ +E
Sbjct: 688 CKLIVSTNVLEEGIDIKECNMVICYDSVLSLKSLVQRRGR-ARSENSQFIVIHHTSKE 744
>gi|13278456|gb|AAH04031.1| Ifih1 protein, partial [Mus musculus]
Length = 514
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR + F E+++ IIF R + I + K E VKA +G
Sbjct: 189 KLIKLRNTILEQF---TRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIG 245
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR GE N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 246 AGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 305
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 306 VQARGR-ARADESTYVLVTSSG 326
>gi|407923675|gb|EKG16741.1| Ribonuclease III [Macrophomina phaseolina MS6]
Length = 1533
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Query: 106 ILESHFRL--HAEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSS----- 157
+LE H L + E+ ++ I+F R + V + P +K+ M +G SS
Sbjct: 417 VLELHTWLLRYFERQTNSRCIVFVQRRHTARILHQVFASIGGPYLKSGMIIGNSSRASGL 476
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
++ +EQ + +F+ GE N L ATSV EEGLDI ++VI FD K+ I+ VQ GR
Sbjct: 477 NISFREQVMTLLRFKKGELNCLFATSVAEEGLDIPNCNIVIRFDLYKTMIQYVQSRGR-A 535
Query: 218 RKRNGRCVILLTQGREAHNFQTSMQT 243
R +N R + ++ +G +H QT ++
Sbjct: 536 RHKNSRYLHMVEEGNISHR-QTVLEA 560
>gi|77415358|gb|AAI06096.1| Ddx58 protein, partial [Mus musculus]
Length = 763
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 21/138 (15%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK------PLEPMVKASMFVGQ---- 155
+L+ + L E TK I+F R +V D LK P +K + G+
Sbjct: 618 VLQEEYHLKPE----TKTILFVKTRALV----DALKKWIEENPALSFLKPGILTGRGRTN 669
Query: 156 -SSGVTQQEQKEIMKKFRA-GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
++G+T QK +++ FRA G+ N LIATSV +EG+DI E +LVI ++ + IKM+Q
Sbjct: 670 RATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVIKMIQTR 729
Query: 214 GRTGRKRNGRCVILLTQG 231
GR GR R+ +C +L +
Sbjct: 730 GR-GRARDSKCFLLTSSA 746
>gi|116283738|gb|AAH27369.1| Ddx58 protein [Mus musculus]
Length = 763
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 21/138 (15%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK------PLEPMVKASMFVGQ---- 155
+L+ + L E TK I+F R +V D LK P +K + G+
Sbjct: 618 VLQEEYHLKPE----TKTILFVKTRALV----DALKKWIEENPALSFLKPGILTGRGRTN 669
Query: 156 -SSGVTQQEQKEIMKKFRA-GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
++G+T QK +++ FRA G+ N LIATSV +EG+DI E +LVI ++ + IKM+Q
Sbjct: 670 RATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVIKMIQTR 729
Query: 214 GRTGRKRNGRCVILLTQG 231
GR GR R+ +C +L +
Sbjct: 730 GR-GRARDSKCFLLTSSA 746
>gi|153945886|ref|NP_766277.3| probable ATP-dependent RNA helicase DDX58 [Mus musculus]
gi|341940435|sp|Q6Q899.2|DDX58_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX58; AltName:
Full=DEAD box protein 58; AltName: Full=RIG-I-like
receptor 1; Short=RLR-1; AltName: Full=Retinoic
acid-inducible gene 1 protein; Short=RIG-1; AltName:
Full=Retinoic acid-inducible gene I protein; Short=RIG-I
gi|148673498|gb|EDL05445.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Mus musculus]
gi|189442795|gb|AAI67209.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [synthetic construct]
Length = 926
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 21/141 (14%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK------PLEPMVKASMFVGQ- 155
L +L+ + L E TK I+F R +V D LK P +K + G+
Sbjct: 615 LYLVLQEEYHLKPE----TKTILFVKTRALV----DALKKWIEENPALSFLKPGILTGRG 666
Query: 156 ----SSGVTQQEQKEIMKKFRA-GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
++G+T QK +++ FRA G+ N LIATSV +EG+DI E +LVI ++ + IKM+
Sbjct: 667 RTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVIKMI 726
Query: 211 QRLGRTGRKRNGRCVILLTQG 231
Q GR GR R+ +C +L +
Sbjct: 727 QTRGR-GRARDSKCFLLTSSA 746
>gi|119850851|gb|AAI27164.1| Ddx58 protein [Mus musculus]
Length = 924
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 21/141 (14%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK------PLEPMVKASMFVGQ- 155
L +L+ + L E TK I+F R +V D LK P +K + G+
Sbjct: 613 LYLVLQEEYHLKPE----TKTILFVKTRALV----DALKKWIEENPALSFLKPGILTGRG 664
Query: 156 ----SSGVTQQEQKEIMKKFRA-GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
++G+T QK +++ FRA G+ N LIATSV +EG+DI E +LVI ++ + IKM+
Sbjct: 665 RTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVIKMI 724
Query: 211 QRLGRTGRKRNGRCVILLTQG 231
Q GR GR R+ +C +L +
Sbjct: 725 QTRGR-GRARDSKCFLLTSSA 744
>gi|302370918|ref|NP_001180567.1| interferon-induced helicase C domain-containing protein 1 [Gallus
gallus]
gi|302128865|dbj|BAJ14020.1| melanoma differentiation associated protein-5 [Gallus gallus]
Length = 1001
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 47 LRSFYNNLVE---VSKEDGSCPILGKDNDLQNLLQQL--KPKLDINIMSSEYAWSHLKFI 101
L +FY L +D P++ K ++ L +L K + ++ + + + K +
Sbjct: 618 LNNFYKELKRRKTAESDDDEEPLVSKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLM 677
Query: 102 RLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG--- 154
+LR L F K E + IIF R + I D K E +KA +G
Sbjct: 678 KLRNTLMEEFT----KTEEPRGIIFTKTRQSALALYHWIMDNPKFEEVGIKAHFLIGAGH 733
Query: 155 --QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
++ +TQ EQ+E++ KFR G N LIAT+V EEGLDI E ++VI + + I MVQ
Sbjct: 734 NSETKPMTQNEQREVIDKFRGGSINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQA 793
Query: 213 LGRT 216
GR
Sbjct: 794 RGRA 797
>gi|157059804|gb|AAI52541.1| Ddx58 protein [Mus musculus]
Length = 925
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 21/141 (14%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK------PLEPMVKASMFVGQ- 155
L +L+ + L E TK I+F R +V D LK P +K + G+
Sbjct: 614 LYLVLQEEYHLKPE----TKTILFVKTRALV----DALKKWIEENPALSFLKPGILTGRG 665
Query: 156 ----SSGVTQQEQKEIMKKFRA-GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
++G+T QK +++ FRA G+ N LIATSV +EG+DI E +LVI ++ + IKM+
Sbjct: 666 RTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVIKMI 725
Query: 211 QRLGRTGRKRNGRCVILLTQG 231
Q GR GR R+ +C +L +
Sbjct: 726 QTRGR-GRARDSKCFLLTSSA 745
>gi|291191927|gb|ADD83027.1| melanoma differentiation-associated protein 5 [Gallus gallus]
Length = 1001
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 47 LRSFYNNLVE---VSKEDGSCPILGKDNDLQNLLQQL--KPKLDINIMSSEYAWSHLKFI 101
L +FY L +D P++ K ++ L +L K + ++ + + + K +
Sbjct: 618 LNNFYKELKRRKTAESDDDEEPLVSKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLM 677
Query: 102 RLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG--- 154
+LR L F K E + IIF R + I D K E +KA +G
Sbjct: 678 KLRNTLMEEFT----KTEEPRGIIFTKTRQSALALYHWIMDNPKFEEVGIKAHFLIGAGH 733
Query: 155 --QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
++ +TQ EQ+E++ KFR G N LIAT+V EEGLDI E ++VI + + I MVQ
Sbjct: 734 NSETKPMTQNEQREVIDKFRGGSINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQA 793
Query: 213 LGRT 216
GR
Sbjct: 794 RGRA 797
>gi|20385628|gb|AAM21359.1| melanoma differentiation associated gene 5-like protein [Mus
musculus]
Length = 1025
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR + F E+++ IIF R + I + K E VKA +G
Sbjct: 700 KLIKLRNTILEQF---TRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIG 756
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR GE N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 757 AGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 816
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 817 VQARGR-ARADESTYVLVTSSG 837
>gi|45385112|gb|AAS59532.1| DEAD/H box polypeptide RIG-I [Mus musculus]
Length = 926
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 21/141 (14%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK------PLEPMVKASMFVGQ- 155
L +L+ + L E TK I+F R +V D LK P +K + G+
Sbjct: 615 LYLVLQEEYHLKPE----TKTILFVKTRALV----DALKKWIEENPALSFLKPGILTGRG 666
Query: 156 ----SSGVTQQEQKEIMKKFRA-GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
++G+T QK +++ FRA G+ N LIATSV +EG+DI E +LVI ++ + IKM+
Sbjct: 667 RTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVIKMI 726
Query: 211 QRLGRTGRKRNGRCVILLTQG 231
Q GR GR R+ +C +L +
Sbjct: 727 QTRGR-GRARDSKCFLLTSSA 746
>gi|26340014|dbj|BAC33670.1| unnamed protein product [Mus musculus]
Length = 472
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 21/138 (15%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK------PLEPMVKASMFVGQ---- 155
+L+ + L E TK I+F R +V D LK P +K + G+
Sbjct: 164 VLQEEYHLKPE----TKTILFVKTRALV----DALKKWIEENPALSFLKPGILTGRGRTN 215
Query: 156 -SSGVTQQEQKEIMKKFRA-GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
++G+T QK +++ FRA G+ N LIATSV +EG+DI E +LVI ++ + IKM+Q
Sbjct: 216 RATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVIKMIQTR 275
Query: 214 GRTGRKRNGRCVILLTQG 231
GR GR R+ +C +L +
Sbjct: 276 GR-GRARDSKCFLLTSSA 292
>gi|74225485|dbj|BAE31652.1| unnamed protein product [Mus musculus]
Length = 1025
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR + F E+++ IIF R + I + K E VKA +G
Sbjct: 700 KLIKLRNTILEQF---TRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIG 756
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR GE N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 757 AGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 816
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 817 VQARGR-ARADESTYVLVTSSG 837
>gi|257096036|ref|NP_082111.2| interferon-induced helicase C domain-containing protein 1 isoform 1
[Mus musculus]
gi|62510931|sp|Q8R5F7.1|IFIH1_MOUSE RecName: Full=Interferon-induced helicase C domain-containing
protein 1; AltName: Full=Helicase with 2 CARD domains;
Short=Helicard; AltName: Full=Interferon induced with
helicase C domain protein 1; AltName: Full=Melanoma
differentiation-associated protein 5; Short=MDA-5;
AltName: Full=RIG-I-like receptor 2; Short=RLR-2
gi|18698981|gb|AAL77205.1| HELICARD [Mus musculus]
gi|132252386|gb|ABO33313.1| melanoma differentiation-associated protein 5 [Mus musculus]
Length = 1025
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR + F E+++ IIF R + I + K E VKA +G
Sbjct: 700 KLIKLRNTILEQF---TRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIG 756
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR GE N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 757 AGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 816
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 817 VQARGR-ARADESTYVLVTSSG 837
>gi|148695044|gb|EDL26991.1| interferon induced with helicase C domain 1 [Mus musculus]
Length = 1025
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR + F E+++ IIF R + I + K E VKA +G
Sbjct: 700 KLIKLRNTILEQF---TRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIG 756
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR GE N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 757 AGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 816
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 817 VQARGR-ARADESTYVLVTSSG 837
>gi|343176226|gb|AEM00325.1| interferon-induced helicase C domain-containing protein 1 [Gallus
gallus]
Length = 1102
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 47 LRSFYNNLVE---VSKEDGSCPILGKDNDLQNLLQQL--KPKLDINIMSSEYAWSHLKFI 101
L +FY L +D P++ K ++ L +L K + ++ + + + K +
Sbjct: 719 LNNFYKELKRRKTAESDDDEEPLVSKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLM 778
Query: 102 RLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG--- 154
+LR L F K E + IIF R + I D K E +KA +G
Sbjct: 779 KLRNTLMEEFT----KTEEPRGIIFTKTRQSALALYHWIMDNPKFEEVGIKAHFLIGAGH 834
Query: 155 --QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
++ +TQ EQ+E++ KFR G N LIAT+V EEGLDI E ++VI + + I MVQ
Sbjct: 835 NSETKPMTQNEQREVIDKFRGGSINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQA 894
Query: 213 LGRT 216
GR
Sbjct: 895 RGRA 898
>gi|132252411|gb|ABO33314.1| melanoma differentiation-associated protein 5 [Mus musculus]
gi|158699346|gb|ABW76702.1| melanoma differentiation-associated protein 5 [Mus musculus]
Length = 1025
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR + F E+++ IIF R + I + K E VKA +G
Sbjct: 700 KLIKLRNTILEQF---TRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIG 756
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR GE N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 757 AGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 816
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 817 VQARGR-ARADESTYVLVTSSG 837
>gi|257096038|ref|NP_001157949.1| interferon-induced helicase C domain-containing protein 1 isoform 2
[Mus musculus]
Length = 976
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR + F E+++ IIF R + I + K E VKA +G
Sbjct: 651 KLIKLRNTILEQF---TRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIG 707
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR GE N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 708 AGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 767
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 768 VQARGR-ARADESTYVLVTSSG 788
>gi|51329784|gb|AAH80200.1| Ifih1 protein [Mus musculus]
Length = 976
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR + F E+++ IIF R + I + K E VKA +G
Sbjct: 651 KLIKLRNTILEQF---TRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIG 707
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR GE N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 708 AGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 767
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 768 VQARGR-ARADESTYVLVTSSG 788
>gi|158706452|sp|A2RAF3.2|DCL1_ASPNC RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1525
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYR---VVVAEIFDVLKPLEPMVKASMFVGQSSG- 158
LRE L +F E TK I+F R +++AE+F L P ++ + +G SG
Sbjct: 447 LREELARYFGRQTE----TKCIVFTQKRYTALILAELFQTLNI--PFLRPGVLIGVRSGD 500
Query: 159 -----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
+T ++Q + KFR GE N L ATSV EEGLDI + +LV+ FD ++ I+ VQ
Sbjct: 501 LAGMNITFRQQFISLVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTLIQYVQSR 560
Query: 214 GRTGRKRNGRCVILLTQGREAH 235
GR R N ++ +G H
Sbjct: 561 GR-ARHFNSTYASMVERGNLEH 581
>gi|317037196|ref|XP_001398755.2| dicer-like protein 1 [Aspergillus niger CBS 513.88]
Length = 1493
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYR---VVVAEIFDVLKPLEPMVKASMFVGQSSG- 158
LRE L +F E TK I+F R +++AE+F L P ++ + +G SG
Sbjct: 414 LREELARYFGRQTE----TKCIVFTQKRYTALILAELFQTLNI--PFLRPGVLIGVRSGD 467
Query: 159 -----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
+T ++Q + KFR GE N L ATSV EEGLDI + +LV+ FD ++ I+ VQ
Sbjct: 468 LAGMNITFRQQFISLVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTLIQYVQSR 527
Query: 214 GRTGRKRNGRCVILLTQGREAH 235
GR R N ++ +G H
Sbjct: 528 GR-ARHFNSTYASMVERGNLEH 548
>gi|405958477|gb|EKC24604.1| Interferon-induced helicase C domain-containing protein 1
[Crassostrea gigas]
Length = 676
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 12/135 (8%)
Query: 102 RLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQSS-- 157
+L+EI+ S + AE+ + I+F R++ + + ++ E + +KA + G +
Sbjct: 330 KLKEIIISTY---AEE-PNMRAIVFVRTRIMTECLVNWMEDTEELQHIKAQKYTGAKASI 385
Query: 158 ---GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLG 214
G+ + EQ ++ FR GE+ ++AT+V EEGLDI E +LV+ +D SP+ M+Q G
Sbjct: 386 SEGGMERHEQVSALELFRDGEYKVIMATTVAEEGLDIKECNLVVRYDYAGSPVAMMQARG 445
Query: 215 RTGRKRNGRCVILLT 229
R GR +N R IL +
Sbjct: 446 R-GRAKNSRFYILAS 459
>gi|340373457|ref|XP_003385258.1| PREDICTED: endoribonuclease Dicer-like [Amphimedon queenslandica]
Length = 1520
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 19/151 (12%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSS 157
KF +L EIL L + + E I+F R+ + ++ ++ P ++ S VG +S
Sbjct: 342 KFSKLLEIL---LNLRSSQAEDFCGIVFVEQRMTAMCLSQIITEIKLPGIRCSFIVGHAS 398
Query: 158 --------------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQ 203
G+ ++Q+E++KKFR+G N LIATSV EEGLD+ + ++VI +D
Sbjct: 399 SSGKIMEKKVSGSGGMNAKKQQEVLKKFRSGTLNLLIATSVVEEGLDVRKCNVVIRYDFP 458
Query: 204 KSPIKMVQRLGRTGRKRNGRCVILLTQGREA 234
K+ VQ GR R ++ R ++L+ Q +E+
Sbjct: 459 KTFQSHVQSKGR-ARAKDSRYLVLIDQTQES 488
>gi|328874858|gb|EGG23223.1| RNA-directed RNA polymerase [Dictyostelium fasciculatum]
Length = 2645
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
Query: 124 IIFANYRVVVAEIFDVLK--PLEPMVKASMFVGQSS--GVTQQEQKEIMKKFRAGEFNTL 179
I+F R +++ +LK P+ +K+ +FVG + G++ ++Q IM+ FR G+ L
Sbjct: 543 IVFVKTRQGCSDLIKLLKKEPVNLHIKSKLFVGHTGEDGMSTEKQNRIMESFRKGDCKFL 602
Query: 180 IATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
+ATSV EEG+D+ + ++VI FD + M+QR GR R ++G+ L+ +G
Sbjct: 603 VATSVLEEGIDVQQCNMVISFDPDLNLRNMIQRRGR-ARSKDGKFAYLIKEG 653
>gi|197246579|gb|AAI68680.1| Ifih1 protein [Rattus norvegicus]
Length = 775
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR + F E+++ IIF R + I + K E VKA +G
Sbjct: 450 KLIKLRNTILEQF---TRSEESSRGIIFTKTRQSTYALSQWIMENEKFAEVGVKAHHLIG 506
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR GE N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 507 AGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 566
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 567 VQARGR-ARADESTYVLVTSSG 587
>gi|453080784|gb|EMF08834.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 1400
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 16/134 (11%)
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLK---PLEPMVKASMFVGQSSG----------VT 160
HAE G +IF RV V + ++L+ LE K + FVG S+ V
Sbjct: 384 HAEPG--VHCLIFVEQRVQVTALAELLRRVPALEDSYKIAGFVGTSTNTNRKISVADLVA 441
Query: 161 QQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKR 220
+Q + ++ FR G N ++AT+V EEG+DI +LVICFDA K+ + VQR GR R+
Sbjct: 442 LSDQSKDLQAFRDGHKNVMVATNVLEEGIDISACNLVICFDAPKNLVSFVQRRGR-ARRT 500
Query: 221 NGRCVILLTQGREA 234
+ + + +++ A
Sbjct: 501 DSKYFLFVSENESA 514
>gi|403297888|ref|XP_003939778.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Saimiri
boliviensis boliviensis]
Length = 937
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 92/173 (53%), Gaps = 14/173 (8%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL + L+ E T I+F
Sbjct: 578 GFDETEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILREEYHLNPE----TITILF 633
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I+ F+A G+ N
Sbjct: 634 VKTRALVDALKNWIEGNPQLSFLKPGILTGRSKTNQNTGMTLPAQKCILDSFKAHGDHNI 693
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L +
Sbjct: 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSSA 745
>gi|157822253|ref|NP_001102669.1| interferon-induced helicase C domain-containing protein 1 [Rattus
norvegicus]
gi|149022117|gb|EDL79011.1| similar to HELICARD (predicted) [Rattus norvegicus]
Length = 1027
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR + F E+++ IIF R + I + K E VKA +G
Sbjct: 702 KLIKLRNTILEQF---TRSEESSRGIIFTKTRQSTYALSQWIMENEKFAEVGVKAHHLIG 758
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR GE N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 759 AGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 818
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 819 VQARGR-ARADESTYVLVTSSG 839
>gi|390598592|gb|EIN07990.1| hypothetical protein PUNSTDRAFT_144457 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1435
Score = 72.4 bits (176), Expect = 4e-10, Method: Composition-based stats.
Identities = 58/185 (31%), Positives = 86/185 (46%), Gaps = 26/185 (14%)
Query: 61 DGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGET 120
D P+LG + + + Q+ DI+I W + L E L SH++ T
Sbjct: 336 DKFAPLLGDADSVDPDVVQI----DIDI-----EWCTPQVAALAETLISHYK------PT 380
Query: 121 TKVIIFANYR---VVVAEIFDVLKPLEPMVKASMFVGQS-------SGVTQQEQKEIMKK 170
+ I+F R V +A + L L V+ + VG G+ Q Q+++++
Sbjct: 381 FQGIVFVEQRHIAVALARLLGRLPELRGRVRCADLVGHGGQTTANLKGMEIQGQQDVVRA 440
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
FR GE N L+ATSV EEGLD DLVI FD + + +Q GR R VI++ +
Sbjct: 441 FRRGEINLLVATSVAEEGLDFPACDLVIRFDPLQHMVGYLQSRGR-ARHHTSTFVIMVPR 499
Query: 231 GREAH 235
G E H
Sbjct: 500 GSEQH 504
>gi|119578951|gb|EAW58547.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, isoform CRA_a [Homo
sapiens]
Length = 703
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 14/169 (8%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 533 GFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 588
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I+ F+A G+ N
Sbjct: 589 VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 648
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L
Sbjct: 649 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLL 696
>gi|453081348|gb|EMF09397.1| dicer-like protein 1 [Mycosphaerella populorum SO2202]
Length = 1541
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 107 LESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSSG------V 159
L + RL E+ + I+F + R + + L P ++ VG ++G
Sbjct: 433 LHRYLRLQFERLSDHRCIVFVDRRYTARMLHILFSRLSTPHMRGHFLVGSNNGGLDEDSF 492
Query: 160 TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK 219
T ++Q + +FR GE N L ATSV EEGLD+ + +L+I FD + I+ VQ GR R
Sbjct: 493 TFRQQVMTLMRFRKGEINCLFATSVAEEGLDVPDCNLIIRFDMYTTMIQYVQSRGR-ARN 551
Query: 220 RNGRCVILLTQGREAHN-----FQTSMQTCKSYVEKIINNKSIYAN 260
RN + + ++ G H+ + + T + Y E + ++ + N
Sbjct: 552 RNSKFIHMIEIGNSTHSQTLNEVRYAEATMRRYCELLPEDRKLQGN 597
>gi|57997555|emb|CAI46068.1| hypothetical protein [Homo sapiens]
Length = 703
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 14/169 (8%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T I+F
Sbjct: 533 GFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE----TITILF 588
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA-GEFNT 178
R +V + + ++ P +K + G Q++G+T QK I+ F+A G+ N
Sbjct: 589 VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 648
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L
Sbjct: 649 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLL 696
>gi|359493214|ref|XP_003634544.1| PREDICTED: uncharacterized protein LOC100254868 [Vitis vinifera]
Length = 982
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
Query: 134 AEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEG 188
+I D L + VKA+ F+GQSSG +Q+ Q+ +++KFRAG FN ++ATS+GEEG
Sbjct: 249 GDIMDALAKIGESVKATQFIGQSSGKASKGQSQKVQQAVLEKFRAGGFNVIVATSIGEEG 308
Query: 189 LDIGEIDLV 197
LDI E+DL+
Sbjct: 309 LDIMEVDLI 317
>gi|423347930|ref|ZP_17325615.1| hypothetical protein HMPREF1060_03287 [Parabacteroides merdae
CL03T12C32]
gi|409215416|gb|EKN08417.1| hypothetical protein HMPREF1060_03287 [Parabacteroides merdae
CL03T12C32]
Length = 427
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 12/136 (8%)
Query: 87 NIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM 146
IM + Y ++ +R ILE F K +VIIF++ ++ V E+ LK ++
Sbjct: 218 TIMQTAYVCYDMQKLR---ILEDLF----SKSRPQRVIIFSSSKMKVKELASTLKRMKFN 270
Query: 147 VKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
V A S + Q +++E+MK+F+ G + L+AT V G+DI +I LVI FD P
Sbjct: 271 VAA-----MHSDLEQSQREEVMKEFKNGRIDILVATDVVSRGIDINDIKLVINFDIPHDP 325
Query: 207 IKMVQRLGRTGRKRNG 222
V R+GRT R NG
Sbjct: 326 EDYVHRIGRTARGTNG 341
>gi|218259702|ref|ZP_03475335.1| hypothetical protein PRABACTJOHN_00994, partial [Parabacteroides
johnsonii DSM 18315]
gi|218224948|gb|EEC97598.1| hypothetical protein PRABACTJOHN_00994 [Parabacteroides johnsonii
DSM 18315]
Length = 372
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 87 NIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM 146
IM + Y ++ +R+ E L S R +VIIF++ ++ V E+ LK ++
Sbjct: 164 TIMQTAYVCYDMQKLRILEDLFSQSR-------PQRVIIFSSSKMKVKELASTLKRMKFN 216
Query: 147 VKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
V A S + Q +++E+MK+F+ G + L+AT V G+DI +I LVI FD P
Sbjct: 217 VAA-----MHSDLEQSQREEVMKEFKNGRIDILVATDVVSRGIDINDIKLVINFDIPHDP 271
Query: 207 IKMVQRLGRTGRKRNGRCVIL 227
V R+GRT R NG + +
Sbjct: 272 EDYVHRIGRTARGTNGEGLAI 292
>gi|154490238|ref|ZP_02030499.1| hypothetical protein PARMER_00470 [Parabacteroides merdae ATCC
43184]
gi|423721833|ref|ZP_17696009.1| hypothetical protein HMPREF1078_00072 [Parabacteroides merdae
CL09T00C40]
gi|154089130|gb|EDN88174.1| DEAD/DEAH box helicase [Parabacteroides merdae ATCC 43184]
gi|409242846|gb|EKN35605.1| hypothetical protein HMPREF1078_00072 [Parabacteroides merdae
CL09T00C40]
Length = 427
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 12/136 (8%)
Query: 87 NIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM 146
IM + Y ++ +R ILE F K +VIIF++ ++ V E+ LK ++
Sbjct: 218 TIMQTAYVCYDMQKLR---ILEDLF----SKSRPQRVIIFSSSKMKVKELASTLKRMKFN 270
Query: 147 VKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
V A S + Q +++E+MK+F+ G + L+AT V G+DI +I LVI FD P
Sbjct: 271 VAA-----MHSDLEQSQREEVMKEFKNGRIDILVATDVVSRGIDINDIKLVINFDIPHDP 325
Query: 207 IKMVQRLGRTGRKRNG 222
V R+GRT R NG
Sbjct: 326 EDYVHRIGRTARGTNG 341
>gi|405966016|gb|EKC31344.1| Putative ATP-dependent RNA helicase DDX58 [Crassostrea gigas]
Length = 1018
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 61 DGSCPILGKDNDLQ-------------NLLQQLKPKLDINIMSSEYAWSHLKFIRLREI- 106
D C IL DLQ L + ++ +L+I + + ++L+EI
Sbjct: 636 DALCYILQNIQDLQISDTGTEIEIRAKTLFENVREELNICATDDQKCEENPLLMKLKEII 695
Query: 107 LESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQSS-----GV 159
LE+H +G I+F RVV I +K + + +KA + G + G
Sbjct: 696 LETHREESNMRG-----IVFVRTRVVADIIASWMKETDELKQIKARKYTGAQARGTDGGS 750
Query: 160 TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK 219
T+ +Q+E ++ F G+F ++AT++ EEGLDI E +LV+ +D + I +Q GR GR
Sbjct: 751 TKSKQRETIELFTKGDFKVIVATTIAEEGLDIEECNLVVKYDYAGNLISQIQAKGR-GRA 809
Query: 220 RNGRCVILLTQGR 232
N R IL ++ +
Sbjct: 810 VNSRFFILASENK 822
>gi|423344472|ref|ZP_17322184.1| hypothetical protein HMPREF1077_03614 [Parabacteroides johnsonii
CL02T12C29]
gi|409212870|gb|EKN05904.1| hypothetical protein HMPREF1077_03614 [Parabacteroides johnsonii
CL02T12C29]
Length = 426
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 12/136 (8%)
Query: 87 NIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM 146
IM + Y ++ +R+ E L S R +VIIF++ ++ V E+ LK ++
Sbjct: 218 TIMQTAYVCYDMQKLRILEDLFSQSR-------PQRVIIFSSSKMKVKELASTLKRMKFN 270
Query: 147 VKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSP 206
V A S + Q +++E+MK+F+ G + L+AT V G+DI +I LVI FD P
Sbjct: 271 VAA-----MHSDLEQSQREEVMKEFKNGRIDILVATDVVSRGIDINDIKLVINFDIPHDP 325
Query: 207 IKMVQRLGRTGRKRNG 222
V R+GRT R NG
Sbjct: 326 EDYVHRIGRTARGTNG 341
>gi|46132992|ref|XP_389201.1| hypothetical protein FG09025.1 [Gibberella zeae PH-1]
Length = 1495
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 14/138 (10%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYR---VVVAEIFDVLKPLEPMVKASMFVGQSSG- 158
L EIL F + T + I+F + R ++++++D + P + AS +GQ S
Sbjct: 408 LHEILVHAFTV----DNTKRCIVFVDQRHTACLLSDLYDQVSMAIPGMNASYMIGQQSSS 463
Query: 159 -----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
++ ++Q +K FR G N L ATSV EEG+DI DLVI FD S I+ VQ
Sbjct: 464 STLGNMSLRKQCSTLKNFRDGVINCLFATSVAEEGIDIPSCDLVIRFDLYTSVIQYVQSK 523
Query: 214 GRTGRKRNGRCVILLTQG 231
GR R + R + +L G
Sbjct: 524 GR-ARHESSRYITMLEDG 540
>gi|156401322|ref|XP_001639240.1| predicted protein [Nematostella vectensis]
gi|156226367|gb|EDO47177.1| predicted protein [Nematostella vectensis]
Length = 689
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Query: 99 KFIRLREILESHFRLHAEKG-ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASM---FVG 154
K ++L+E+L + + E G + K I+F+ R + +K + + M VG
Sbjct: 358 KLVKLQELLLDYHKGETESGLDHAKGILFSKTRESTIALEKWIKETPELSQELMPLRLVG 417
Query: 155 QS---SGVTQQEQKEIMKKFRAG-EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
S G+TQ+EQ+E++ KFRAG E N +IAT+V EEGLDI + VI +D + I V
Sbjct: 418 NSDGRGGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDMMGNEISSV 477
Query: 211 QRLGRTGRKRNGRCVILLTQ 230
Q GR K G+ +++ Q
Sbjct: 478 QSRGRVRTKTGGQYSVVVGQ 497
>gi|224024964|ref|ZP_03643330.1| hypothetical protein BACCOPRO_01695 [Bacteroides coprophilus DSM
18228]
gi|224018200|gb|EEF76198.1| hypothetical protein BACCOPRO_01695 [Bacteroides coprophilus DSM
18228]
Length = 423
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQK 165
I+ES F+ + + +VIIFA+ ++ V E+ LK L+ + VG+ Q Q+
Sbjct: 234 IIESLFK----EQQPERVIIFASSKIKVKEVTKALKRLK------LNVGEMHSDLDQSQR 283
Query: 166 E-IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRC 224
E IM +FR G N L+AT + G+DI +I LVI +D V R+GRT R N C
Sbjct: 284 EAIMHEFRNGRINMLVATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGC 343
Query: 225 VILLTQGREAHNFQ 238
I E + F+
Sbjct: 344 AITFVSETEQNKFK 357
>gi|163789073|ref|ZP_02183517.1| possible ATP-dependent RNA helicase [Flavobacteriales bacterium
ALC-1]
gi|159875737|gb|EDP69797.1| possible ATP-dependent RNA helicase [Flavobacteriales bacterium
ALC-1]
Length = 450
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 14/126 (11%)
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS----SGVTQQEQKEIM 168
LH + E +KV+IF Y+ + +FD L+ +F GQS S TQ + +
Sbjct: 236 LH-DTNEFSKVLIFVAYKRMADRLFDKLE--------DIFPGQSCVIHSNKTQNYRLRSI 286
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCVIL 227
++FRAGE L+AT V GLDI I VI FD P + R+GRTGR ++ GR ++
Sbjct: 287 EQFRAGEHRLLVATDVMARGLDIDNITHVINFDTTDYPENYMHRIGRTGRAEKQGRTILF 346
Query: 228 LTQGRE 233
T+ +
Sbjct: 347 STEAEQ 352
>gi|302412697|ref|XP_003004181.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261356757|gb|EEY19185.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 1240
Score = 70.9 bits (172), Expect = 1e-09, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 21/192 (10%)
Query: 73 LQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVV 132
L N+L+Q+ M S + S+ KF+ L E H A G T IIF R
Sbjct: 185 LANILRQISISEPQVSMLSTHNTSN-KFMMLIE----HMSSKATDG--TAGIIFVKERST 237
Query: 133 VAEIFDVLK--PLEPMVKASM--FVGQSSGVTQQE----------QKEIMKKFRAGEFNT 178
A + V++ PL P + +S+ VG S+ + +++ + E + +FR+G N
Sbjct: 238 AAMLAHVIESHPLTPNMYSSVGVVVGTSNHLVRKKDMWDLSRAAHETEPLLQFRSGHLNL 297
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
LIATSV EEG+D+ +LVICFD ++ VQR GR +K + V+L G +++
Sbjct: 298 LIATSVLEEGIDVPACNLVICFDEPENLKAFVQRRGRARKKDSSLVVLLPGTGHVPQDWE 357
Query: 239 TSMQTCKSYVEK 250
+ T +++ EK
Sbjct: 358 SMEATMRTHYEK 369
>gi|189205613|ref|XP_001939141.1| endoribonuclease dcr-1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975234|gb|EDU41860.1| endoribonuclease dcr-1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1572
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 106 ILESHFRLH--AEKGETTKVIIFANYRVVVAEIFDVLKPLEPM-VKASMFVGQSSGVTQQ 162
+L+ H+ LH E+ + + I+F R + + L ++ S+ VG ++ +++Q
Sbjct: 450 VLKLHYWLHRYYERSDEARCIVFVEQRQTARLLQLIFASLGGSNLRCSVLVGVNNRISEQ 509
Query: 163 E-----QKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
Q + KFR GE N L ATSV EEGLDI + +LV+ FD ++ I VQ GR
Sbjct: 510 NISLRNQILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIAYVQSRGR-A 568
Query: 218 RKRNGRCVILLTQGREAH 235
R RN + + +L G H
Sbjct: 569 RHRNSKYLHMLEDGNHDH 586
>gi|380695433|ref|ZP_09860292.1| ATP-dependent RNA helicase [Bacteroides faecis MAJ27]
Length = 422
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 11/143 (7%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEI-MKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK M+K + VG+ +Q Q+E+ M +F+AG N L+
Sbjct: 246 RVIIFASSKIKVKEVTKALK----MMKLN--VGEMHSDLEQAQREVVMHEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI FD V R+GRT R N + +E NF
Sbjct: 300 ATDIVARGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFVSEKEQSNF--- 356
Query: 241 MQTCKSYVEKIINNKSIYANLAK 263
++ ++++EK I + A L +
Sbjct: 357 -KSIENFLEKEIYKIPVPAELGE 378
>gi|358366696|dbj|GAA83316.1| hypothetical protein AKAW_01431 [Aspergillus kawachii IFO 4308]
Length = 1404
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYR---VVVAEIFDVLKPLEPMVKASMFVGQSSG- 158
LRE L +F E TK I+F R ++++E+F L P ++ + +G SG
Sbjct: 422 LREELAHYFGRPTE----TKCIVFTQKRYTALILSELFQTLNI--PFIRPGVLIGVRSGD 475
Query: 159 -----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
+T ++Q + KFR GE N L ATSV EEGLDI + +LV+ FD ++ I+ VQ
Sbjct: 476 LAGMNITFRQQFISLVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTLIQYVQSR 535
Query: 214 GRTGRKRNGRCVILLTQGREAH 235
GR R N ++ +G H
Sbjct: 536 GR-ARHFNSTYASMVERGNLDH 556
>gi|393788148|ref|ZP_10376279.1| hypothetical protein HMPREF1068_02559 [Bacteroides nordii
CL02T12C05]
gi|392656361|gb|EIY50000.1| hypothetical protein HMPREF1068_02559 [Bacteroides nordii
CL02T12C05]
Length = 413
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 11/143 (7%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK M+K + VG+ +Q Q+E IM +F++G N L+
Sbjct: 246 RVIIFASSKIKVKEVAKALK----MMKLN--VGEMHSDLEQAQREFIMHEFKSGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI FD V R+GRT R N + +E QT+
Sbjct: 300 ATDIVSRGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFVNEKE----QTN 355
Query: 241 MQTCKSYVEKIINNKSIYANLAK 263
+ ++++EK I S+ A L +
Sbjct: 356 FKNIENFLEKDIYKISVPAELGE 378
>gi|29346241|ref|NP_809744.1| ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
gi|383122509|ref|ZP_09943201.1| hypothetical protein BSIG_0752 [Bacteroides sp. 1_1_6]
gi|29338136|gb|AAO75938.1| ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
gi|251842399|gb|EES70479.1| hypothetical protein BSIG_0752 [Bacteroides sp. 1_1_6]
Length = 422
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 11/143 (7%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEI-MKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK M+K + VG+ +Q Q+E+ M +F+AG N L+
Sbjct: 246 RVIIFASSKIKVKEVTKALK----MMKLN--VGEMHSDLEQAQREVVMHEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI FD V R+GRT R N + +E NF
Sbjct: 300 ATDIVARGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFISEKEQSNF--- 356
Query: 241 MQTCKSYVEKIINNKSIYANLAK 263
++ ++++EK I + A L +
Sbjct: 357 -KSIENFLEKEIYKIPVPAELGE 378
>gi|363743602|ref|XP_003642879.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Gallus
gallus]
Length = 674
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 13/149 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG 154
+ +L EIL+ HF + +++ I+F R + L+ + ++A++ G
Sbjct: 348 RLSKLEEILQEHF----QPPGSSRGIVFTKTRQSAHSLLSWLQDTAGLCGQHIRAAVLTG 403
Query: 155 -----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
Q+ G+TQ EQ++++ FR GE N L +TSV EEGLDI E ++V+ + + I M
Sbjct: 404 SGHSNQAKGMTQNEQQDVITLFRYGELNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAM 463
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
VQ GR + + V+ RE + Q
Sbjct: 464 VQAQGRARAQNSMYSVLAKANSREVYREQ 492
>gi|339892124|gb|AEK21509.1| LGP2 [Gallus gallus]
Length = 674
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 13/149 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG 154
+ +L EIL+ HF + +++ I+F R + L+ + ++A++ G
Sbjct: 348 RLSKLEEILQEHF----QPPGSSRGIVFTKTRQSAHSLLSWLQDTAGLCGQHIRAAVLTG 403
Query: 155 -----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
Q+ G+TQ EQ++++ FR GE N L +TSV EEGLDI E ++V+ + + I M
Sbjct: 404 SGHSNQAKGMTQNEQQDVITLFRYGELNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAM 463
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
VQ GR + + V+ RE + Q
Sbjct: 464 VQAQGRARAQNSMYSVLAKANSREVYREQ 492
>gi|298385617|ref|ZP_06995175.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
gi|298261758|gb|EFI04624.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
Length = 413
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 11/143 (7%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEI-MKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK M+K + VG+ +Q Q+E+ M +F+AG N L+
Sbjct: 246 RVIIFASSKIKVKEVTKALK----MMKLN--VGEMHSDLEQAQREVVMHEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI FD V R+GRT R N + +E NF
Sbjct: 300 ATDIVARGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFISEKEQSNF--- 356
Query: 241 MQTCKSYVEKIINNKSIYANLAK 263
++ ++++EK I + A L +
Sbjct: 357 -KSIENFLEKEIYKIPVPAELGE 378
>gi|403417815|emb|CCM04515.1| predicted protein [Fibroporia radiculosa]
Length = 1463
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 72 DLQNLLQQLKPKLDINIMSSEYAWS-HLKFI--RLREILESHFRLHAEKGETTKVIIFAN 128
DLQ+ L + + + + S+ + HLK+ ++RE+++ F T + I+F
Sbjct: 329 DLQDALVEYRSFFEDDSNSNSVPLTVHLKWCSPKVRELIDILF---GHYTSTFQGIVFVE 385
Query: 129 YRVVVAEIFDVLK---PLEPMVKASMFVG---------QSSGVTQQEQKEIMKKFRAGEF 176
R V A + +L L ++K+ +G Q G+ + Q++I+K FR +
Sbjct: 386 QRHVAACLATMLSRVPQLSHLIKSEQLIGHGASTLAKSQMKGMALKTQQDIVKMFRERKI 445
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
N LIATSV EEGLD DLVI FD + + +Q GR R R+ + +I++ QG H
Sbjct: 446 NLLIATSVAEEGLDFPACDLVIRFDPLQHMVGYLQSRGR-ARHRSSKFIIMVQQGHTVH 503
>gi|405979826|ref|ZP_11038167.1| hypothetical protein HMPREF9241_00890 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391201|gb|EJZ86265.1| hypothetical protein HMPREF9241_00890 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 753
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 123 VIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIAT 182
I+F R V E+ LE + G S V Q E++ ++ + RAG + LIAT
Sbjct: 316 AIVFVRTRADVEEV-----SLEMSARGFRAAGISGDVAQTERERMVARLRAGTLDVLIAT 370
Query: 183 SVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLT 229
V GLD+ I LV+ FD + P V R+GRTGR R GR + T
Sbjct: 371 DVAARGLDVERISLVVNFDVPREPEAYVHRIGRTGRAGREGRSLTFFT 418
>gi|73965821|ref|XP_860532.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 3
[Canis lupus familiaris]
Length = 678
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 21/165 (12%)
Query: 105 EILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG-----Q 155
E+LE R ++ + IIF R + L+ + ++A + +G Q
Sbjct: 352 EMLEQILREQFGHSDSPRGIIFTQTRQSTHSLLLWLQQQPGLQTVDIRADLLIGAGNSSQ 411
Query: 156 SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
++ +TQ++Q+E+++KFR G N L+ATSV EEGLDI + ++V+ + + I MVQ
Sbjct: 412 NTHMTQRDQQEVIRKFRVGTLNLLVATSVAEEGLDIPQCNVVVRYGLLSNEISMVQ---A 468
Query: 216 TGRKRNGRCV--ILLTQG-----REAHN--FQTSMQTCKSYVEKI 251
GR R GR + + TQG RE N +T M+ + V+K+
Sbjct: 469 RGRARAGRSIYSFVATQGSRELRRELINEVLETLMERAVAAVQKM 513
>gi|158259343|dbj|BAF85630.1| unnamed protein product [Homo sapiens]
Length = 1025
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 700 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 755
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 756 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 815
Query: 209 MVQRLGRTGRKRNGRCVILLTQG 231
MVQ GR R CV++ G
Sbjct: 816 MVQARGR-ARADESTCVLVAHSG 837
>gi|291383111|ref|XP_002708086.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide RIG-I
[Oryctolagus cuniculus]
Length = 926
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 18/175 (10%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L ++ + K+ ++ +S + + + K L IL+ + ++ E TK I+F
Sbjct: 579 GFDETEQDLTRRFEGKVQELETVSMDPSNENPKLKDLYLILQEEYHVNPE----TKTILF 634
Query: 127 ANYRVVVAEI---------FDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRA-GEF 176
R +V I LKP ++ Q++G+T QK ++ FR+ G+
Sbjct: 635 VKTRALVDAIKKWIEENSKLSFLKP--GILTGRGKTSQTTGMTLPAQKCVLDAFRSNGDH 692
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
N LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR + +C++L +
Sbjct: 693 NILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRAKGSKCLLLTSNA 746
>gi|340516882|gb|EGR47129.1| predicted protein [Trichoderma reesei QM6a]
Length = 1376
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKP---------LEPMVKASMFVGQSSGVTQQEQK---E 166
E T IIF RV+VA + +VL + MV S + G+ V +QK +
Sbjct: 370 EPTVGIIFVEERVMVAMLAEVLSVNHTITSRYRIGTMVGTSNYAGRRKAVYDFDQKTDYK 429
Query: 167 IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVI 226
++ FR+G+ N LIATSV EEG+D+ +LVICFD +P +QR GR R ++ ++
Sbjct: 430 DLQSFRSGKINLLIATSVLEEGIDVPACNLVICFDTPTTPKSFIQRRGR-ARSKDSNLLL 488
Query: 227 LLTQGREA 234
A
Sbjct: 489 FFDDANPA 496
>gi|449267492|gb|EMC78435.1| putative ATP-dependent RNA helicase DHX58 [Columba livia]
Length = 674
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 13/124 (10%)
Query: 102 RLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG--- 154
+L +IL+ HF+ H T++ I+F R + L+ + ++A++ G
Sbjct: 351 KLEQILQEHFQPHG----TSRGIVFTKTRQSAHSLLSWLQDTAALRGEHIRAAVLTGAGY 406
Query: 155 --QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
Q+ +TQ EQ++++K FR G N L +TSV EEGLDI E ++V+ + + I MVQ
Sbjct: 407 SNQTRHMTQNEQQDVIKLFREGALNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAMVQA 466
Query: 213 LGRT 216
GR
Sbjct: 467 RGRA 470
>gi|296190081|ref|XP_002743043.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Callithrix
jacchus]
Length = 925
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL + L+ E T I+F
Sbjct: 578 GFDETEQDLTQRFEEKLQELESISRDPSNENPKLEDLCFILREEYHLNPE----TITILF 633
Query: 127 ANYRVVVAEI---------FDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRA-GEF 176
R +V + LKP ++ Q++G+T QK I+ F+A G+
Sbjct: 634 VKTRALVDALKNWIEGNSKLSFLKP--GILTGRSKTNQNTGMTLPAQKCILDSFKAHGDH 691
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHN 236
N LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L +
Sbjct: 692 NILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAAVIEK 750
Query: 237 FQTSMQTCKSYVEKIINN 254
+M Y EK++N+
Sbjct: 751 ENINM-----YKEKMMND 763
>gi|85001586|ref|XP_955506.1| dead box RNA helicase [Theileria annulata strain Ankara]
gi|65303652|emb|CAI76030.1| dead box RNA helicase, putative [Theileria annulata]
Length = 654
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
+ +F E+ ++ F KV+IF++ + ++ L+ +A G
Sbjct: 488 NFEFPNSYEVKDNLFDFLGSLAPEKKVLIFSDLKSFADQLTSALRYRR--FRAYSLHGNK 545
Query: 157 SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
TQ +++ I+ +R+GEFN L+AT V GLDI +ID VI D KS + + R+GRT
Sbjct: 546 ---TQNQRERILNMYRSGEFNILVATDVAARGLDIKDIDYVINLDVPKSLLDYIHRIGRT 602
Query: 217 GRKRN 221
GR N
Sbjct: 603 GRGNN 607
>gi|329962827|ref|ZP_08300712.1| DEAD/DEAH box helicase [Bacteroides fluxus YIT 12057]
gi|328529384|gb|EGF56297.1| DEAD/DEAH box helicase [Bacteroides fluxus YIT 12057]
Length = 428
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK ++ + VG+ S + Q +++E+M +F+AG N L+
Sbjct: 246 RVIIFASSKIKVKEVTKALKQMK------LNVGEMHSDLEQAQREEVMYEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI +D V R+GRT R N + +E NF
Sbjct: 300 ATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVALTFISEKEQSNF--- 356
Query: 241 MQTCKSYVEKII 252
+ ++++EK I
Sbjct: 357 -KNIENFLEKTI 367
>gi|336470988|gb|EGO59149.1| hypothetical protein NEUTE1DRAFT_60268 [Neurospora tetrasperma FGSC
2508]
gi|350292065|gb|EGZ73260.1| hypothetical protein NEUTE2DRAFT_107618 [Neurospora tetrasperma
FGSC 2509]
Length = 1583
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 26/167 (15%)
Query: 84 LDINIMSSEYAWSHLKFIRLREILESHFRLHAEKG-ETTKVIIFANYRVVVAEIFDVLKP 142
LD ++SS K I L IL F E+G + IIF R + D+L+
Sbjct: 439 LDPTMLSS-------KVIMLVRILRDQF----ERGVGAQRCIIFVRQRNTAMLLADLLQQ 487
Query: 143 LE-----PMVKASMFVGQSSG--------VTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
E P + A + VG + + Q+Q I++KF+ GE N L ATSV EEGL
Sbjct: 488 PEIKSHIPSIAAEVLVGGGTTGSSYVNAKINFQQQNRIIRKFKLGEINCLFATSVAEEGL 547
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHN 236
DI + ++VI FD + I+ +Q GR R+ + R + ++ +G H+
Sbjct: 548 DIPDCNIVIRFDLYDTLIQCIQSRGR-ARRPDSRYIQMIEKGNYEHH 593
>gi|449507056|ref|XP_002194080.2| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Taeniopygia guttata]
Length = 1033
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKP----LEPMVKASMFVG 154
K ++LR L F K E + I+F R+ +F +K E +KA +G
Sbjct: 706 KLMKLRNTLMEEFT----KTEEPRGIVFTKTRLSAFALFQWIKDNPKFEEVGIKAHYLIG 761
Query: 155 -----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+ +TQ EQ+E++ KFR G N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 762 SGHKSEMKPMTQNEQREVIDKFRCGNVNLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 821
Query: 210 VQRLGRT 216
VQ GR
Sbjct: 822 VQARGRA 828
>gi|85105148|ref|XP_961898.1| hypothetical protein NCU08270 [Neurospora crassa OR74A]
gi|74616659|sp|Q7S8J7.1|DCL1_NEUCR RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl-1; Includes: RecName:
Full=ATP-dependent helicase dcl-1
gi|28923482|gb|EAA32662.1| predicted protein [Neurospora crassa OR74A]
Length = 1584
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 26/167 (15%)
Query: 84 LDINIMSSEYAWSHLKFIRLREILESHFRLHAEKG-ETTKVIIFANYRVVVAEIFDVLKP 142
LD ++SS K I L IL F E+G + IIF R + D+L+
Sbjct: 440 LDPTMLSS-------KVIMLVRILRDQF----ERGVGAQRCIIFVRQRNTAMLLADLLQQ 488
Query: 143 LE-----PMVKASMFVGQSSG--------VTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
E P + A + VG + + Q+Q I++KF+ GE N L ATSV EEGL
Sbjct: 489 PEIKSHIPSIAAEVLVGGGTTGSSYVNAKINFQQQNRIIRKFKLGEINCLFATSVAEEGL 548
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHN 236
DI + ++VI FD + I+ +Q GR R+ + R + ++ +G H+
Sbjct: 549 DIPDCNIVIRFDLYDTLIQCIQSRGR-ARRPDSRYIQMIEKGNYEHH 594
>gi|423299961|ref|ZP_17277986.1| hypothetical protein HMPREF1057_01127 [Bacteroides finegoldii
CL09T03C10]
gi|408473770|gb|EKJ92292.1| hypothetical protein HMPREF1057_01127 [Bacteroides finegoldii
CL09T03C10]
Length = 421
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 11/143 (7%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ L ++ + VG+ +Q Q+E +M +F+AG N L+
Sbjct: 246 RVIIFASSKIKVKEVAKALMAMK------LNVGEMHSDLEQAQRETVMHEFKAGRVNILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI FD V R+GRT R N + +E NF
Sbjct: 300 ATDIVARGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFVSEKEQSNF--- 356
Query: 241 MQTCKSYVEKIINNKSIYANLAK 263
++ ++++EK I I A L +
Sbjct: 357 -KSIENFLEKDIYKIPIPAELGE 378
>gi|354459713|pdb|3TBK|A Chain A, Mouse Rig-I Atpase Domain
Length = 555
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 21/141 (14%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK------PLEPMVKASMFVGQ- 155
L +L+ + L E TK I+F R +V D LK P +K + G+
Sbjct: 376 LYLVLQEEYHLKPE----TKTILFVKTRALV----DALKKWIEENPALSFLKPGILTGRG 427
Query: 156 ----SSGVTQQEQKEIMKKFRA-GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
++G T QK +++ FRA G+ N LIATSV +EG+DI E +LVI ++ + IK +
Sbjct: 428 RTNRATGXTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVIKXI 487
Query: 211 QRLGRTGRKRNGRCVILLTQG 231
Q GR GR R+ +C +L +
Sbjct: 488 QTRGR-GRARDSKCFLLTSSA 507
>gi|242809985|ref|XP_002485488.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC
10500]
gi|218716113|gb|EED15535.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC
10500]
Length = 1420
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 21/151 (13%)
Query: 122 KVIIFANYRVVVAEIFDVLK--PLEPMVKASMFVGQS------SGVTQQ----EQKEIMK 169
+VI+FA R V + +L PL + F+G S S +T+ EQK+++
Sbjct: 394 RVIVFAEQRATVIMLAHLLSVHPLTKGIVTKYFLGNSNYANRKSNITELSTLVEQKDVLT 453
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
+ R G+ N LIAT+V EEG+D+ ++VICFD K +QR GR R R R V+ +
Sbjct: 454 ELRVGKTNVLIATNVLEEGIDVPACNIVICFDPPKDLRSFIQRRGR-ARDRQSRLVLFID 512
Query: 230 QGREAHNFQTSMQTCKSYVEKIINNKSIYAN 260
N + +S EK+ K IYA+
Sbjct: 513 G-----NDDDGLAKWESMEEKL---KEIYAD 535
>gi|255691877|ref|ZP_05415552.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacteroides
finegoldii DSM 17565]
gi|260622430|gb|EEX45301.1| DEAD/DEAH box helicase [Bacteroides finegoldii DSM 17565]
Length = 421
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 11/143 (7%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ L ++ + VG+ +Q Q+E +M +F+AG N L+
Sbjct: 246 RVIIFASSKIKVKEVAKALMAMK------LNVGEMHSDLEQAQRETVMHEFKAGRVNILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI FD V R+GRT R N + +E NF
Sbjct: 300 ATDIVARGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFVSEKEQSNF--- 356
Query: 241 MQTCKSYVEKIINNKSIYANLAK 263
++ ++++EK I I A L +
Sbjct: 357 -KSIENFLEKDIYKIPIPAELGE 378
>gi|242215871|ref|XP_002473747.1| predicted protein [Postia placenta Mad-698-R]
gi|220727142|gb|EED81071.1| predicted protein [Postia placenta Mad-698-R]
Length = 1725
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 18/153 (11%)
Query: 97 HLKFI--RLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK---PLEPMVKASM 151
HLK+ ++RE+++ F A + I+F R V A + +L L ++K
Sbjct: 354 HLKWCSPKVRELIDILF---AHYTSNFQGIVFVEQRHVAACLSKILPRVPQLSHLIKTGQ 410
Query: 152 FVG---------QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDA 202
+G Q+ G+ + Q++I+K FR + N LIATSV EEGLD DLVI FD
Sbjct: 411 LIGHGTTNLAKMQTKGMALRTQQDIVKLFRERKINLLIATSVAEEGLDFPACDLVIRFDP 470
Query: 203 QKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
+ + +Q GR R R+ + +I++ +G E H
Sbjct: 471 LQHMVGYLQSRGR-ARHRSSKFIIMVQEGHENH 502
>gi|354493096|ref|XP_003508680.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 isoform 2 [Cricetulus griseus]
Length = 973
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR+ + F + E+++ IIF R + I + K E VKA +G
Sbjct: 648 KLIKLRKTILEQF---TKTEESSRGIIFTKTRQSTYALSQWITENEKFAEVGVKAHHLIG 704
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 705 AGHSSEVKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 764
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 765 VQARGR-ARADESTYVLVTSSG 785
>gi|375256324|ref|YP_005015491.1| putative DEAD-box ATP-dependent RNA helicase CshA [Tannerella
forsythia ATCC 43037]
gi|363408757|gb|AEW22443.1| putative DEAD-box ATP-dependent RNA helicase CshA [Tannerella
forsythia ATCC 43037]
Length = 437
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 117 KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEF 176
K + +VIIF++ ++ V E+ LK L V A S + Q E++++MK+FR G
Sbjct: 241 KKQPERVIIFSSSKMKVKELTAALKRLHFNVAA-----MHSDLEQSEREQVMKEFRNGRI 295
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHN 236
L+AT V G+DI +I LVI +D P V R+GRT R +G+ + + ++
Sbjct: 296 GVLVATDVVARGIDINDITLVINYDIPNDPEDYVHRIGRTARGTDGKGLAITFVSQQE-- 353
Query: 237 FQTSMQTCKSYVEKIINNKSIYANLAK 263
Q + ++++EK I + A+L +
Sbjct: 354 -QAKFKEIETFLEKEIYKIPLDADLGE 379
>gi|154147577|ref|NP_001093664.1| interferon-induced helicase C domain-containing protein 1 [Sus
scrofa]
gi|152148442|gb|ABS29718.1| melanoma differentiation associated protein-5 [Sus scrofa]
Length = 1023
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K +LR + HF E+ + IIF R + I D K E VKA +G
Sbjct: 697 KLTKLRNTIMEHF---TRTEESARGIIFTKTRQSAYALSQWITDNKKFAEVGVKAHHLIG 753
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+TQ EQ+E++ KFR G+ N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 754 AGHSSEFKPMTQNEQREVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 813
Query: 210 VQRLGRT 216
VQ GR
Sbjct: 814 VQARGRA 820
>gi|354493094|ref|XP_003508679.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 isoform 1 [Cricetulus griseus]
gi|344245797|gb|EGW01901.1| Interferon-induced helicase C domain-containing protein 1
[Cricetulus griseus]
Length = 1022
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR+ + F + E+++ IIF R + I + K E VKA +G
Sbjct: 697 KLIKLRKTILEQF---TKTEESSRGIIFTKTRQSTYALSQWITENEKFAEVGVKAHHLIG 753
Query: 155 --QSSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
SS V TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 754 AGHSSEVKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 813
Query: 210 VQRLGRTGRKRNGRCVILLTQG 231
VQ GR R V++ + G
Sbjct: 814 VQARGR-ARADESTYVLVTSSG 834
>gi|298484048|ref|ZP_07002217.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
gi|336402162|ref|ZP_08582904.1| hypothetical protein HMPREF0127_00217 [Bacteroides sp. 1_1_30]
gi|423213649|ref|ZP_17200178.1| hypothetical protein HMPREF1074_01710 [Bacteroides xylanisolvens
CL03T12C04]
gi|298269829|gb|EFI11421.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
gi|335944483|gb|EGN06304.1| hypothetical protein HMPREF0127_00217 [Bacteroides sp. 1_1_30]
gi|392693578|gb|EIY86809.1| hypothetical protein HMPREF1074_01710 [Bacteroides xylanisolvens
CL03T12C04]
Length = 420
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VI+FA+ ++ V E+ LK ++ + VG+ +Q Q+E +M +F+AG N L+
Sbjct: 246 RVIVFASSKIKVKEVAKALKSMK------LNVGEMHSDLEQAQRETVMHEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
AT + G+DI +I LVI FD V R+GRT R N + +E NF++
Sbjct: 300 ATDIVARGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFINEKEQSNFKS 358
>gi|262406616|ref|ZP_06083165.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646166|ref|ZP_06723822.1| putative ATP-dependent RNA helicase DeaD [Bacteroides ovatus SD CC
2a]
gi|294807864|ref|ZP_06766646.1| putative ATP-dependent RNA helicase DeaD [Bacteroides xylanisolvens
SD CC 1b]
gi|345509298|ref|ZP_08788899.1| ATP-dependent RNA helicase [Bacteroides sp. D1]
gi|229446711|gb|EEO52502.1| ATP-dependent RNA helicase [Bacteroides sp. D1]
gi|262355319|gb|EEZ04410.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638495|gb|EFF56857.1| putative ATP-dependent RNA helicase DeaD [Bacteroides ovatus SD CC
2a]
gi|294444926|gb|EFG13611.1| putative ATP-dependent RNA helicase DeaD [Bacteroides xylanisolvens
SD CC 1b]
Length = 420
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VI+FA+ ++ V E+ LK ++ + VG+ +Q Q+E +M +F+AG N L+
Sbjct: 246 RVIVFASSKIKVKEVAKALKSMK------LNVGEMHSDLEQAQRETVMHEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
AT + G+DI +I LVI FD V R+GRT R N + +E NF++
Sbjct: 300 ATDIVARGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFINEKEQSNFKS 358
>gi|340514590|gb|EGR44851.1| predicted protein [Trichoderma reesei QM6a]
Length = 1416
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYR---VVVAEIFDVLKPLEPMVKASMFVGQSSG- 158
L E+LE F K +T + I+F R ++A++F L P + +G S
Sbjct: 332 LHEVLEDAFC----KRQTKRCIVFVQARSTAFILADLFQQPGMLIPGMTVGYMIGSQSTS 387
Query: 159 -----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
++ +EQ ++KFR GE N L ATSV EEG+D+ E D+++ FD S I+ +Q
Sbjct: 388 SSAAYMSYREQIVSLQKFRYGETNCLFATSVAEEGIDVPECDVIVRFDLYSSAIQYIQSK 447
Query: 214 GRTGRKRNGRCVILLTQGREAH 235
GR R+++ + ++ +G H
Sbjct: 448 GR-ARQKSSLYISMMEEGNLDH 468
>gi|255013264|ref|ZP_05285390.1| ATP-dependent RNA helicase [Bacteroides sp. 2_1_7]
Length = 426
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
+VIIF++ ++ V E+ LK L+ V A S + Q +++E+MK+F++G + L+A
Sbjct: 247 RVIIFSSSKMKVKELASTLKRLKFNVAA-----MHSDLEQSQREEVMKEFKSGHIDILVA 301
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNG 222
T V G+DI +I LV+ FD P V R+GRT R NG
Sbjct: 302 TDVVARGIDINDIKLVVNFDIPHDPEDYVHRIGRTARGTNG 342
>gi|293373074|ref|ZP_06619442.1| DEAD/DEAH box helicase [Bacteroides ovatus SD CMC 3f]
gi|292631960|gb|EFF50570.1| DEAD/DEAH box helicase [Bacteroides ovatus SD CMC 3f]
Length = 422
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VI+FA+ ++ V E+ LK ++ + VG+ +Q Q+E +M +F+AG N L+
Sbjct: 246 RVIVFASSKIKVKEVAKALKSMK------LNVGEMHSDLEQAQRETVMHEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
AT + G+DI +I LVI FD V R+GRT R N + +E NF++
Sbjct: 300 ATDIVARGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFISEKEQSNFKS 358
>gi|170722989|ref|YP_001750677.1| DEAD/DEAH box helicase [Pseudomonas putida W619]
gi|169760992|gb|ACA74308.1| DEAD/DEAH box helicase domain protein [Pseudomonas putida W619]
Length = 452
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K IIF N RV+ I+ L + VKA + G+ Q+++K +++F+ G L+A
Sbjct: 258 KAIIFTNTRVLADRIYGHLVAKD--VKAFVLHGEKD---QKDRKLAIERFKQGSSKVLVA 312
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN-GRCVILLTQGREAHNFQTS 240
T V GLDI +DLVI FD +S + V R+GRTGR G + L+T HN
Sbjct: 313 TDVAARGLDIDGLDLVINFDMPRSGDEYVHRIGRTGRAGGEGLAISLIT-----HNDWNL 367
Query: 241 MQTCKSYVEKIINNKSI-YANLAKNGPRMIPA 271
M + + Y+++ + I NGP+ + A
Sbjct: 368 MSSIERYLKQQFERRVIKEVKGTYNGPKKVKA 399
>gi|402225633|gb|EJU05694.1| hypothetical protein DACRYDRAFT_113750 [Dacryopinax sp. DJM-731
SS1]
Length = 1596
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 32/261 (12%)
Query: 24 MIQRDFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDND-------LQNL 76
+I +++++ + A+E+LV R + L ++ D P + K N ++ L
Sbjct: 276 IIGAEYYLSAVVPRAIESLVLNKRREL-STLRKLLSVDDPAPGIAKINGQIEELEGIKAL 334
Query: 77 LQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEI 136
L Q + W + IRL EIL+ + + IIFA R VV +
Sbjct: 335 LVQQSAHFFAQSLEVRPEWLAPRVIRLAEILQQCY----TADPACQCIIFAEQRQVVMVL 390
Query: 137 FDVLKP---LEPMVKASMFVGQSS-------------GVTQQEQKEIMKKFRAGEFNTLI 180
+L+ L M++ + G G++ +EQ+ ++ FR G+ N L+
Sbjct: 391 SWILRHISYLRTMIRPTFITGHGGSTHRSMRDLEDVQGMSVKEQQVAVRHFRDGKANLLV 450
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
ATSV EEGLD +LVI FDA K+ + Q GR +K + ++ + EA +
Sbjct: 451 ATSVAEEGLDFQPCNLVIRFDALKTMVSYAQSRGRARQKASTYIIMRRSVPTEADKYTQF 510
Query: 241 M----QTCKSYVEKIINNKSI 257
M Q ++Y ++ I + I
Sbjct: 511 MRAEPQLKEAYQKRAIQDGEI 531
>gi|224088236|ref|XP_002308384.1| dicer-like protein [Populus trichocarpa]
gi|222854360|gb|EEE91907.1| dicer-like protein [Populus trichocarpa]
Length = 1588
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMV--KASMFVGQS 156
K +RL EIL S+FRL + K I+F N V + +L+ L+ + K VG
Sbjct: 415 KLLRLIEIL-SNFRLQPD----MKCIVFVNRIVTARSLSHILQNLKFLTSWKCDFLVGVH 469
Query: 157 SGVTQQEQKE---IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
SG+ +K I+++FR G+ N L+AT VGEEGLDI LVI FD ++ +Q
Sbjct: 470 SGLKSMSRKTMNVILERFRTGKLNLLLATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 529
Query: 214 GRTGRKRNGRCVILLTQGRE 233
GR R V L+ G +
Sbjct: 530 GR-ARMPQSEYVFLVDSGNQ 548
>gi|150008034|ref|YP_001302777.1| ATP-dependent RNA helicase [Parabacteroides distasonis ATCC 8503]
gi|149936458|gb|ABR43155.1| ATP-dependent RNA helicase [Parabacteroides distasonis ATCC 8503]
Length = 426
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
+VIIF++ ++ V E+ LK L+ V A S + Q +++E+MK+F++G + L+A
Sbjct: 247 RVIIFSSSKMKVKELASTLKRLKFNVAA-----MHSDLEQSQREEVMKEFKSGHIDILVA 301
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNG 222
T V G+DI +I LV+ FD P V R+GRT R NG
Sbjct: 302 TDVVARGIDINDIKLVVNFDIPHDPEDYVHRIGRTARGTNG 342
>gi|410103883|ref|ZP_11298803.1| hypothetical protein HMPREF0999_02575 [Parabacteroides sp. D25]
gi|409235786|gb|EKN28597.1| hypothetical protein HMPREF0999_02575 [Parabacteroides sp. D25]
Length = 466
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
+VIIF++ ++ V E+ LK L+ V A S + Q +++E+MK+F++G + L+A
Sbjct: 287 RVIIFSSSKMKVKELASTLKRLKFNVAA-----MHSDLEQSQREEVMKEFKSGHIDILVA 341
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNG 222
T V G+DI +I LV+ FD P V R+GRT R NG
Sbjct: 342 TDVVARGIDINDIKLVVNFDIPHDPEDYVHRIGRTARGTNG 382
>gi|393784034|ref|ZP_10372203.1| hypothetical protein HMPREF1071_03071 [Bacteroides salyersiae
CL02T12C01]
gi|392667693|gb|EIY61200.1| hypothetical protein HMPREF1071_03071 [Bacteroides salyersiae
CL02T12C01]
Length = 415
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK M+K + VG+ +Q Q+E IM +F++G N L+
Sbjct: 246 RVIIFASSKIKVKEVAKALK----MMKLN--VGEMHSDLEQAQREFIMHEFKSGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
AT + G+DI +I LVI FD V R+GRT R N I +E NF+
Sbjct: 300 ATDIVSRGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVAITFVNEKEQTNFK 357
>gi|262381389|ref|ZP_06074527.1| ATP-dependent RNA helicase [Bacteroides sp. 2_1_33B]
gi|262296566|gb|EEY84496.1| ATP-dependent RNA helicase [Bacteroides sp. 2_1_33B]
Length = 408
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
+VIIF++ ++ V E+ LK L+ V A S + Q +++E+MK+F++G + L+A
Sbjct: 229 RVIIFSSSKMKVKELASTLKRLKFNVAA-----MHSDLEQSQREEVMKEFKSGHIDILVA 283
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNG 222
T V G+DI +I LV+ FD P V R+GRT R NG
Sbjct: 284 TDVVARGIDINDIKLVVNFDIPHDPEDYVHRIGRTARGTNG 324
>gi|256840789|ref|ZP_05546297.1| ATP-dependent RNA helicase [Parabacteroides sp. D13]
gi|298376614|ref|ZP_06986569.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacteroides sp.
3_1_19]
gi|301309869|ref|ZP_07215808.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacteroides sp.
20_3]
gi|256738061|gb|EEU51387.1| ATP-dependent RNA helicase [Parabacteroides sp. D13]
gi|298266492|gb|EFI08150.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacteroides sp.
3_1_19]
gi|300831443|gb|EFK62074.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacteroides sp.
20_3]
Length = 426
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
+VIIF++ ++ V E+ LK L+ V A S + Q +++E+MK+F++G + L+A
Sbjct: 247 RVIIFSSSKMKVKELASTLKRLKFNVAA-----MHSDLEQSQREEVMKEFKSGHIDILVA 301
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNG 222
T V G+DI +I LV+ FD P V R+GRT R NG
Sbjct: 302 TDVVARGIDINDIKLVVNFDIPHDPEDYVHRIGRTARGTNG 342
>gi|160884579|ref|ZP_02065582.1| hypothetical protein BACOVA_02566 [Bacteroides ovatus ATCC 8483]
gi|237718558|ref|ZP_04549039.1| ATP-dependent RNA helicase [Bacteroides sp. 2_2_4]
gi|299145716|ref|ZP_07038784.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacteroides sp.
3_1_23]
gi|336413268|ref|ZP_08593620.1| hypothetical protein HMPREF1017_00728 [Bacteroides ovatus
3_8_47FAA]
gi|383111896|ref|ZP_09932700.1| hypothetical protein BSGG_4556 [Bacteroides sp. D2]
gi|423286675|ref|ZP_17265526.1| hypothetical protein HMPREF1069_00569 [Bacteroides ovatus
CL02T12C04]
gi|423296461|ref|ZP_17274546.1| hypothetical protein HMPREF1070_03211 [Bacteroides ovatus
CL03T12C18]
gi|156110318|gb|EDO12063.1| DEAD/DEAH box helicase [Bacteroides ovatus ATCC 8483]
gi|229452018|gb|EEO57809.1| ATP-dependent RNA helicase [Bacteroides sp. 2_2_4]
gi|298516207|gb|EFI40088.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacteroides sp.
3_1_23]
gi|313697021|gb|EFS33856.1| hypothetical protein BSGG_4556 [Bacteroides sp. D2]
gi|335938312|gb|EGN00202.1| hypothetical protein HMPREF1017_00728 [Bacteroides ovatus
3_8_47FAA]
gi|392670184|gb|EIY63669.1| hypothetical protein HMPREF1070_03211 [Bacteroides ovatus
CL03T12C18]
gi|392675362|gb|EIY68804.1| hypothetical protein HMPREF1069_00569 [Bacteroides ovatus
CL02T12C04]
Length = 422
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VI+FA+ ++ V E+ LK ++ + VG+ +Q Q+E +M +F+AG N L+
Sbjct: 246 RVIVFASSKIKVKEVAKALKSMK------LNVGEMHSDLEQAQRETVMHEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
AT + G+DI +I LVI FD V R+GRT R N + +E NF++
Sbjct: 300 ATDIVARGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFISEKEQSNFKS 358
>gi|408393408|gb|EKJ72672.1| hypothetical protein FPSE_07072 [Fusarium pseudograminearum CS3096]
Length = 1510
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYR---VVVAEIFDVLKPLEPMVKASMFVGQSSG- 158
L EIL F + T + I+F + R ++++++ + P + AS +GQ S
Sbjct: 423 LHEILVHAFTI----DNTKRCIVFVDQRHTACLLSDLYSQVSMAIPGMNASYMIGQQSSS 478
Query: 159 -----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
++ ++Q +K FR G N L ATSV EEG+DI DLVI FD S I+ VQ
Sbjct: 479 SALGNMSLRKQCSTLKNFRDGMINCLFATSVAEEGIDIPSCDLVIRFDLYTSVIQYVQSK 538
Query: 214 GRTGRKRNGRCVILLTQG 231
GR R + R + +L G
Sbjct: 539 GR-ARHESSRYITMLEDG 555
>gi|405973601|gb|EKC38303.1| Putative ATP-dependent RNA helicase DDX58 [Crassostrea gigas]
Length = 948
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 26/146 (17%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEI---------FDVLKPLEPMVKA 149
K LR+I+ HFR + +VI+F R + + +LKP++
Sbjct: 620 KLTNLRDIIGEHFR----ENPGARVIVFVKTRELAKAMETYMNETKELSILKPIQ----- 670
Query: 150 SMFVG-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
FVG ++ G+T+ +Q E ++ F+ G +IATSV EEGLDI + LV+ +D
Sbjct: 671 --FVGVQANRENGGMTKVQQDETLELFKEGNHKVIIATSVAEEGLDILKCSLVVRYDHVT 728
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLTQ 230
+ I MVQ GR GR N V+L ++
Sbjct: 729 NEIAMVQSRGR-GRSENSIYVVLASE 753
>gi|153806359|ref|ZP_01959027.1| hypothetical protein BACCAC_00620 [Bacteroides caccae ATCC 43185]
gi|423218666|ref|ZP_17205162.1| hypothetical protein HMPREF1061_01935 [Bacteroides caccae
CL03T12C61]
gi|149131036|gb|EDM22242.1| DEAD/DEAH box helicase [Bacteroides caccae ATCC 43185]
gi|392628169|gb|EIY22204.1| hypothetical protein HMPREF1061_01935 [Bacteroides caccae
CL03T12C61]
Length = 420
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK ++ + VG+ +Q Q+E +M F+AG N L+
Sbjct: 246 RVIIFASSKIKVKEVTKALKSMK------LNVGEMHSDLEQVQREAVMHDFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
AT + G+DI +I LVI FD V R+GRT R N + +E NF++
Sbjct: 300 ATDIVARGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFVSEKEQSNFKS 358
>gi|291333650|gb|ADD93341.1| hypothetical protein [uncultured archaeon MedDCM-OCT-S11-C441]
Length = 270
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 92/159 (57%), Gaps = 10/159 (6%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K +R ++ + AE +++I+FANYR V + L LE +KA F+GQS
Sbjct: 34 HSKVGAVRRMVRERVKRDAE----SRIIVFANYRDTVEALEKALDGLEG-IKAIQFIGQS 88
Query: 157 SG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
S +T ++Q +++FR+G N L+ATSVGEEGLDI DLV+ ++ S I+ +Q
Sbjct: 89 SRSGSGGLTPKQQISRLEEFRSGGANVLVATSVGEEGLDIPSADLVVFYEPVSSEIRTIQ 148
Query: 212 RLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEK 250
R GRTGR+R G V+L+ +G + S + + ++ K
Sbjct: 149 RRGRTGRRRGGEVVVLIAEGTRDEGAKDSARRKEEFMHK 187
>gi|410672237|ref|YP_006924608.1| DEAD/DEAH box helicase domain-containing protein [Methanolobus
psychrophilus R15]
gi|409171365|gb|AFV25240.1| DEAD/DEAH box helicase domain-containing protein [Methanolobus
psychrophilus R15]
Length = 431
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 124 IIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATS 183
++F N + V E+ D LK + + G + QQ+++ +M FR G+ TL+AT
Sbjct: 246 LVFCNTKRAVDELVDTLK-----TRGYLADGLHGDMKQQQRERVMASFRKGDIETLVATD 300
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLTQGREAHNFQT 239
V G+D+ I++V FD + V R+GRTGR R GR +T GRE + ++
Sbjct: 301 VAARGIDVENIEVVFNFDLPQDEESYVHRIGRTGRAGRQGRAFTFVT-GRELYKIKS 356
>gi|167763057|ref|ZP_02435184.1| hypothetical protein BACSTE_01423 [Bacteroides stercoris ATCC
43183]
gi|167699397|gb|EDS15976.1| DEAD/DEAH box helicase [Bacteroides stercoris ATCC 43183]
Length = 430
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK ++ + VG+ S + Q +++E+M +F+AG N L+
Sbjct: 246 RVIIFASSKLKVKEVAKALKQMK------LNVGEMHSDLEQAQREEVMYEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI +D V R+GRT R N + +E QT+
Sbjct: 300 ATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVALTFVNEKE----QTN 355
Query: 241 MQTCKSYVEKII 252
++ ++++EK I
Sbjct: 356 FKSIENFLEKEI 367
>gi|423331449|ref|ZP_17309233.1| hypothetical protein HMPREF1075_01246 [Parabacteroides distasonis
CL03T12C09]
gi|423340346|ref|ZP_17318085.1| hypothetical protein HMPREF1059_04010 [Parabacteroides distasonis
CL09T03C24]
gi|409227781|gb|EKN20677.1| hypothetical protein HMPREF1059_04010 [Parabacteroides distasonis
CL09T03C24]
gi|409230332|gb|EKN23197.1| hypothetical protein HMPREF1075_01246 [Parabacteroides distasonis
CL03T12C09]
Length = 466
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
+VIIF++ ++ V E+ LK L+ V A S + Q +++E+MK+F++G + L+A
Sbjct: 287 RVIIFSSSKMKVKELASTLKRLKFNVAA-----MHSDLEQSQREEVMKEFKSGHIDILVA 341
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNG 222
T V G+DI +I LV+ FD P V R+GRT R NG
Sbjct: 342 TDVVARGIDINDIKLVVNFDIPHDPEDYVHRIGRTARGTNG 382
>gi|451856503|gb|EMD69794.1| hypothetical protein COCSADRAFT_341850 [Cochliobolus sativus
ND90Pr]
Length = 1575
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 107 LESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSS-----GVT 160
L L+ E+ + + I+F R + + + P ++ S+ VG +S ++
Sbjct: 452 LHYWLNLYYERSDEARCIVFVEQRQTARLLQLIFSQIGGPHLRCSVLVGVNSREHEQNIS 511
Query: 161 QQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKR 220
+ Q + KFR GE N L ATSV EEGLDI + +LV+ FD ++ I VQ GR R R
Sbjct: 512 LRNQIITVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIAYVQSRGR-ARHR 570
Query: 221 NGRCVILLTQGREAH 235
N + + ++ +G H
Sbjct: 571 NSKYLHMIEEGNHDH 585
>gi|301619410|ref|XP_002939087.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like [Xenopus
(Silurana) tropicalis]
Length = 624
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 15/152 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE----------PMVK 148
K +L EIL+ F+ + ++ IIF R + + + + P+
Sbjct: 353 KLTKLEEILKDQFQFSS----VSRGIIFTRTRQSTHSLHNWISGKDYFQKMGIKTAPLTG 408
Query: 149 ASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
A + QS +TQ EQ+E+++KFR GE N L++TSV EEGLDI + ++V+ + + I
Sbjct: 409 AG-YSNQSKHMTQNEQREVIEKFRKGELNLLVSTSVAEEGLDIPQCNVVVRYGLMTNEIA 467
Query: 209 MVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
MVQ GR + + + + G+E QT+
Sbjct: 468 MVQARGRARHEDSCYSFLAKSGGKEIRREQTN 499
>gi|300727714|ref|ZP_07061100.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Prevotella
bryantii B14]
gi|299775002|gb|EFI71608.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Prevotella
bryantii B14]
Length = 555
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 118 GETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEF 176
G+ +VI+F + V ++ L+ + + G+ S +TQ+E+ +IM KF+AG+
Sbjct: 243 GDLKRVIVFCGSKTKVKQVNSALQ------RKHINSGEMHSDLTQEERNDIMYKFKAGQL 296
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCVILLTQGREAH 235
+ L+AT + G+DI +I +VI +D V R+GRT R R+G + L+++ + +
Sbjct: 297 DVLVATDIVSRGIDIDDITMVINYDVPHDTEDYVHRIGRTARADRDGVAITLVSEEDQFY 356
Query: 236 NFQTSMQTCKSYVEKIINNKSIYANLAKNGP 266
Q + ++EK I + NL +GP
Sbjct: 357 -----FQQTEKFLEKEIQKNKLPENLG-DGP 381
>gi|403304472|ref|XP_003942820.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 2
[Saimiri boliviensis boliviensis]
Length = 578
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 44/216 (20%)
Query: 28 DFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCP---ILGKDNDLQNLLQQLK--- 81
D + H A++ L L+SFY +K C +L ND +N+L L
Sbjct: 282 DALLIHDTVRAVDALA--ALQSFYQR-EHATKTQILCAERWLLALFNDHKNVLAHLATHG 338
Query: 82 ---PKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFD 138
PKL++ L +IL+ FR ++ + IIF R +
Sbjct: 339 LENPKLEM----------------LEKILQKQFR----SSDSPRGIIFTRTRQSAHSLLL 378
Query: 139 VLKPLEPM----VKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
L+ + ++A + +G QS+ +TQ++Q+E+++ FR+G N L+ATSV EEGL
Sbjct: 379 WLQQQPGLRTVDIRAQLLIGSGNSSQSTHMTQKDQQEVIRNFRSGTLNLLVATSVAEEGL 438
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV 225
DI + ++V+ + + I MVQ GR R G+ V
Sbjct: 439 DIPQCNVVVRYGLLTNEISMVQ---ARGRARAGQSV 471
>gi|158706454|sp|Q0CW42.2|DCL1_ASPTN RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1519
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSSG------VTQQEQKEIMKKFRA 173
TK I+F R +FD+ L P ++ + +G S VT ++Q M +FR
Sbjct: 453 TKCIVFTEKRYTAKVLFDLFTVLNVPGLRPGVLIGVRSSDRIGMNVTFRQQILTMVRFRT 512
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
GE N L AT+V EEGLDI + +LV+ FD K+ I+ VQ GR
Sbjct: 513 GEINCLFATAVAEEGLDIPDCNLVVRFDLYKTLIQYVQSRGR 554
>gi|441494712|gb|AGC51036.1| melanoma-differentiation-associated 5 [Anser anser]
Length = 1004
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 29/189 (15%)
Query: 51 YNNLVEVSKEDGSCPILGKDND--------------LQNLLQQLKPKLDINIMSSEYAWS 96
YN+L KE+ S +G D+D L +L K L + EY
Sbjct: 618 YNHLNNFYKEEKSKKTVGSDDDDEPAVSKQDETDEFLIDLFHAKKKHLKELARNPEY--E 675
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMF 152
+ K I+LR L F K + + IIF R + I D K E +KA
Sbjct: 676 NEKLIKLRNTLMEEFT----KTKEPRGIIFTKTRQSAFALFQWIMDNPKFEEVGIKAHYL 731
Query: 153 VG-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
+G ++ +TQ EQ+E++ KFR G + LIAT+V EEGLDI E ++VI + + I
Sbjct: 732 IGAGHNSETKPMTQNEQREVIDKFRGGSVDLLIATTVAEEGLDIKECNIVIRYGLVTNEI 791
Query: 208 KMVQRLGRT 216
M+Q GR
Sbjct: 792 AMLQARGRA 800
>gi|403304470|ref|XP_003942819.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 1
[Saimiri boliviensis boliviensis]
Length = 678
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 44/216 (20%)
Query: 28 DFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCP---ILGKDNDLQNLLQQLK--- 81
D + H A++ L L+SFY +K C +L ND +N+L L
Sbjct: 289 DALLIHDTVRAVDALA--ALQSFYQR-EHATKTQILCAERWLLALFNDHKNVLAHLATHG 345
Query: 82 ---PKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFD 138
PKL++ L +IL+ FR ++ + IIF R +
Sbjct: 346 LENPKLEM----------------LEKILQKQFR----SSDSPRGIIFTRTRQSAHSLLL 385
Query: 139 VLKPLEPM----VKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
L+ + ++A + +G QS+ +TQ++Q+E+++ FR+G N L+ATSV EEGL
Sbjct: 386 WLQQQPGLRTVDIRAQLLIGSGNSSQSTHMTQKDQQEVIRNFRSGTLNLLVATSVAEEGL 445
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV 225
DI + ++V+ + + I MVQ GR R G+ V
Sbjct: 446 DIPQCNVVVRYGLLTNEISMVQ---ARGRARAGQSV 478
>gi|357167959|ref|XP_003581414.1| PREDICTED: endoribonuclease Dicer homolog 4-like [Brachypodium
distachyon]
Length = 1627
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 22/177 (12%)
Query: 63 SCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTK 122
SC IL +D L+ L+ L N KF L +L S +RL E K
Sbjct: 340 SCNILDGTHDDSFDLEMLEEPLFSN-----------KFAVLINVL-SRYRLE----ENMK 383
Query: 123 VIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQSSGV---TQQEQKEIMKKFRAGEFN 177
IIF V I +++ L+ + K VG SG+ ++ + +I++KF +GE N
Sbjct: 384 CIIFVKRIAVARAISHIIRNLKCLDFWKCEFLVGCHSGLKNMSRNKMDDIVEKFSSGEVN 443
Query: 178 TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREA 234
L+ATSVGEEGLDI LV+ FD ++ +Q GR R + V+LL +G ++
Sbjct: 444 LLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGR-ARMTISKYVVLLERGNQS 499
>gi|317480121|ref|ZP_07939231.1| DEAD/DEAH box helicase [Bacteroides sp. 4_1_36]
gi|316903668|gb|EFV25512.1| DEAD/DEAH box helicase [Bacteroides sp. 4_1_36]
Length = 405
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK ++ + VG+ S + Q +++E+M +F+AG N L+
Sbjct: 223 RVIIFASSKLKVKEVTKALKQMK------LNVGEMHSDLEQAQREEVMYEFKAGRINILV 276
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
AT + G+DI +I LVI +D V R+GRT R N I +E NF+
Sbjct: 277 ATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVAITFVSEKEQGNFK 334
>gi|158705946|sp|Q0UL22.2|DCL2_PHANO RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
Length = 1399
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 19/133 (14%)
Query: 124 IIFANYRVVVAEIFDVLKPLEP----MVKASMFVGQS---------SGVTQ-QEQKEIMK 169
++F RV VA I +VL + P +++ FVG+S + +++ + Q+ ++
Sbjct: 385 LVFVEQRVWVACIAEVLA-IHPETRDLLRVGTFVGESENSKRKANIASISEPRNQQATLE 443
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
FRAG+ N ++ATSV EEG+D+ LV+CF++ K+ VQR GR RK + VI +
Sbjct: 444 NFRAGKLNLILATSVLEEGIDVSSCHLVVCFESPKNLKSFVQRRGR-ARKEESKYVIFVP 502
Query: 230 QG---REAHNFQT 239
Q R+ ++Q+
Sbjct: 503 QAGRRRDPESWQS 515
>gi|291419805|gb|ADE05310.1| interferon-induced helicase C domain-containing protein 1 [Anas
platyrhynchos]
Length = 458
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 28/183 (15%)
Query: 51 YNNLVEVSKEDGSCPILGKDND-------------LQNLLQQLKPKLDINIMSSEYAWSH 97
YN+L KE+ S +G D+D L +L K +L EY +
Sbjct: 281 YNHLNNFYKEEKSKKTIGSDDDEPAVSKQDETDEFLLDLFHAKKKQLKELARKPEY--EN 338
Query: 98 LKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKP----LEPMVKASMFV 153
K ++LR L F K + + IIF R +F +K E +KA +
Sbjct: 339 EKLVKLRNTLMEEFT----KTKEPRGIIFTKTRQSAFALFQWIKDNPKFEEVGIKAHYLI 394
Query: 154 G-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G ++ +TQ EQ+E++ KFR G N LIAT+V EEGLDI E ++VI + + I
Sbjct: 395 GAGHNSETKPMTQNEQREVIDKFRGGSVNLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 454
Query: 209 MVQ 211
M+Q
Sbjct: 455 MLQ 457
>gi|224539911|ref|ZP_03680450.1| hypothetical protein BACCELL_04822 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518465|gb|EEF87570.1| hypothetical protein BACCELL_04822 [Bacteroides cellulosilyticus
DSM 14838]
Length = 435
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK M+K + VG+ S + Q +++E+M +F+AG N L+
Sbjct: 246 RVIIFASSKLKVKEVTKALK----MMK--LNVGEMHSDLEQAQREEVMHEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI +D V R+GRT R N + +E NF
Sbjct: 300 ATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVALTFVNEKEQSNF--- 356
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKE 300
+ ++++E+ I + L ++ P P R K + K R T K S PK+
Sbjct: 357 -KQIENFLERDIYKIPVPEELGES-PEYKPRSYDGRGK-RNFRAKGRNT-NKGSGNAPKK 412
Query: 301 NEKANKKSKKKLETDGNSEPAGKQNK 326
+ + + ++ + P+GK NK
Sbjct: 413 GDASKGRGNAPRKS---ANPSGKSNK 435
>gi|358397707|gb|EHK47075.1| hypothetical protein TRIATDRAFT_291296 [Trichoderma atroviride IMI
206040]
Length = 1507
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQK------------- 165
++T IIF RV+V + ++L + P +K VG G + K
Sbjct: 487 QSTMGIIFVEERVMVKMLAEILS-INPAIKKKYRVGTMVGSSSYSSKRRVVYDFGDKGDL 545
Query: 166 EIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV 225
+ ++ FR+G+ N LIAT+V EEG+D+ +LVICFD K+ +QR GR R ++ R V
Sbjct: 546 KALQNFRSGKINLLIATAVLEEGIDVPACNLVICFDVPKTSKSFIQRRGR-ARMKDSRLV 604
Query: 226 ILLTQG 231
+ +G
Sbjct: 605 LFFDEG 610
>gi|409046535|gb|EKM56015.1| hypothetical protein PHACADRAFT_122116 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1496
Score = 68.6 bits (166), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 95 WSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVA---EIFDVLKPLEPMVKASM 151
W K + L ++L +++ + + IIF R V A ++ + PLE K++
Sbjct: 349 WCSPKVVLLSQLLFEYYK------QNFQGIIFVEQRHVAACLSKMLPRIPPLELYFKSAQ 402
Query: 152 FVG---------QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDA 202
+G Q G+ + Q+E +K FR GE N L+ATSV EEGLD +LV+ FD
Sbjct: 403 LIGHGASSVQKSQVRGMALKSQQEAVKMFRDGECNLLVATSVAEEGLDFPACELVVRFDP 462
Query: 203 QKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
+ + +Q GR R++ ++++ +G+ +H
Sbjct: 463 IQHMVGYIQSRGR-ARQKAATFMVMVQEGQASH 494
>gi|423225777|ref|ZP_17212244.1| hypothetical protein HMPREF1062_04430 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392631362|gb|EIY25335.1| hypothetical protein HMPREF1062_04430 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 422
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK M+K + VG+ S + Q +++E+M +F+AG N L+
Sbjct: 246 RVIIFASSKLKVKEVTKALK----MMKLN--VGEMHSDLEQAQREEVMHEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
AT + G+DI +I LVI +D V R+GRT R N + +E NF+
Sbjct: 300 ATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVALTFVNEKEQSNFK 357
>gi|341897553|gb|EGT53488.1| CBN-DRH-1 protein [Caenorhabditis brenneri]
Length = 306
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 13/130 (10%)
Query: 110 HFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG--------QSS 157
+ RL+ + + ++VIIF R + ++L E + +K G ++S
Sbjct: 8 YIRLNHGENQNSRVIIFVQTRYEAMTLKNILSENEHLQELDIKTDWIFGMNRTTEGSENS 67
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
V++ EQ E +KKF GE L++TSV EEGLDI E +LVI ++ + I VQR GR G
Sbjct: 68 TVSRTEQLEKLKKFANGEVRVLVSTSVAEEGLDISECNLVIKYNYATNVIAHVQRRGR-G 126
Query: 218 RKRNGRCVIL 227
R + + +++
Sbjct: 127 RANDSKSILI 136
>gi|158706522|sp|Q4WVE3.3|DCL1_ASPFU RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1537
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 15/124 (12%)
Query: 102 RLREILESHFRLHAEKGETTKVIIFANYRV---VVAEIFDVLKPLEPMVKASMFVGQSSG 158
RLR L HF TK I+F R ++ E+F VL P ++ + +G G
Sbjct: 455 RLRMELSKHF----NDTTGTKCIVFTQKRYTAKILNELFTVLNI--PNLRPGVLIGVRPG 508
Query: 159 ------VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
+T ++Q + KFR GE N L ATSV EEGLDI + +LVI FD ++ I+ VQ
Sbjct: 509 DIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYVQS 568
Query: 213 LGRT 216
GR
Sbjct: 569 RGRA 572
>gi|146324173|ref|XP_753471.2| RNA helicase/RNAse III [Aspergillus fumigatus Af293]
gi|129558032|gb|EAL91433.2| RNA helicase/RNAse III, putative [Aspergillus fumigatus Af293]
Length = 1546
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 102 RLREILESHFRLHAEKGETTKVIIFANYRV---VVAEIFDVLKPLEPMVKASMFVGQSSG 158
RLR L HF TK I+F R ++ E+F VL P ++ + +G G
Sbjct: 476 RLRMELSKHF----NDTTGTKCIVFTQKRYTAKILNELFTVLNI--PNLRPGVLIGVRPG 529
Query: 159 ------VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
+T ++Q + KFR GE N L ATSV EEGLDI + +LVI FD ++ I+ VQ
Sbjct: 530 DIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYVQS 589
Query: 213 LGR 215
GR
Sbjct: 590 RGR 592
>gi|159126799|gb|EDP51915.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus A1163]
Length = 1546
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 15/124 (12%)
Query: 102 RLREILESHFRLHAEKGETTKVIIFANYRV---VVAEIFDVLKPLEPMVKASMFVGQSSG 158
RLR L HF TK I+F R ++ E+F VL P ++ + +G G
Sbjct: 476 RLRMELSKHF----NDTTGTKCIVFTQKRYTAKILNELFTVLNI--PNLRPGVLIGVRPG 529
Query: 159 ------VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
+T ++Q + KFR GE N L ATSV EEGLDI + +LVI FD ++ I+ VQ
Sbjct: 530 DIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYVQS 589
Query: 213 LGRT 216
GR
Sbjct: 590 RGRA 593
>gi|423306897|ref|ZP_17284896.1| hypothetical protein HMPREF1072_03836 [Bacteroides uniformis
CL03T00C23]
gi|423308519|ref|ZP_17286509.1| hypothetical protein HMPREF1073_01259 [Bacteroides uniformis
CL03T12C37]
gi|392677982|gb|EIY71394.1| hypothetical protein HMPREF1072_03836 [Bacteroides uniformis
CL03T00C23]
gi|392686960|gb|EIY80258.1| hypothetical protein HMPREF1073_01259 [Bacteroides uniformis
CL03T12C37]
Length = 428
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK ++ + VG+ S + Q +++E+M +F+AG N L+
Sbjct: 246 RVIIFASSKLKVKEVTKALKQMK------LNVGEMHSDLEQAQREEVMYEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
AT + G+DI +I LVI +D V R+GRT R N I +E NF+
Sbjct: 300 ATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVAITFVSEKEQGNFK 357
>gi|160888241|ref|ZP_02069244.1| hypothetical protein BACUNI_00650 [Bacteroides uniformis ATCC 8492]
gi|156862187|gb|EDO55618.1| DEAD/DEAH box helicase [Bacteroides uniformis ATCC 8492]
Length = 428
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK ++ + VG+ S + Q +++E+M +F+AG N L+
Sbjct: 246 RVIIFASSKLKVKEVTKALKQMK------LNVGEMHSDLEQAQREEVMYEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
AT + G+DI +I LVI +D V R+GRT R N I +E NF+
Sbjct: 300 ATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVAITFVSEKEQGNFK 357
>gi|169608916|ref|XP_001797877.1| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
gi|160701743|gb|EAT85008.2| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
Length = 1017
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 19/133 (14%)
Query: 124 IIFANYRVVVAEIFDVLKPLEP----MVKASMFVGQS---------SGVTQ-QEQKEIMK 169
++F RV VA I +VL + P +++ FVG+S + +++ + Q+ ++
Sbjct: 153 LVFVEQRVWVACIAEVLA-IHPETRDLLRVGTFVGESENSKRKANIASISEPRNQQATLE 211
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
FRAG+ N ++ATSV EEG+D+ LV+CF++ K+ VQR GR RK + VI +
Sbjct: 212 NFRAGKLNLILATSVLEEGIDVSSCHLVVCFESPKNLKSFVQRRGR-ARKEESKYVIFVP 270
Query: 230 QG---REAHNFQT 239
Q R+ ++Q+
Sbjct: 271 QAGRRRDPESWQS 283
>gi|409082707|gb|EKM83065.1| hypothetical protein AGABI1DRAFT_125544 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1430
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 10/118 (8%)
Query: 122 KVIIFANYRVVVA---EIFDVLKPLEPMVKASMFVGQ---SSGV---TQQEQKEIMKKFR 172
+VI+F R V A +I V+ LE ++++ VGQ S GV T + ++ FR
Sbjct: 377 QVIVFVEQRQVAACLSKILPVIPGLEGKIRSAHLVGQGVNSDGVSKATDTYHGDAIQAFR 436
Query: 173 AGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
GE N LIATSV EEGLD DLV+ FD + + VQ GR R + R ++++ Q
Sbjct: 437 KGEVNVLIATSVAEEGLDFPACDLVVRFDPFRHMVGYVQSRGR-ARNADSRFIVMIRQ 493
>gi|301778989|ref|XP_002924913.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Ailuropoda melanoleuca]
gi|281343300|gb|EFB18884.1| hypothetical protein PANDA_014321 [Ailuropoda melanoleuca]
Length = 1019
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 67/128 (52%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K I+LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 693 KLIKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENKKFAEVGVKAHHLI 748
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 749 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 808
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 809 MVQARGRA 816
>gi|443925066|gb|ELU43989.1| type III restriction enzyme [Rhizoctonia solani AG-1 IA]
Length = 1442
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 34/204 (16%)
Query: 47 LRSFYNNLVEVSKEDG--SCPILGKD-NDLQNL-------LQQLKPKLDINIMSSEYAWS 96
L ++++ ++ E G S P+ G+ +DL N +Q+ LD + M S W
Sbjct: 315 LGAYFSRASSLAPETGGDSSPVAGQTWSDLDNAYNEHLATIQERARGLDKSQMMS---WL 371
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEP----MVKASMF 152
K L ILE A + + +IF R V A L PL P VKA+
Sbjct: 372 TPKLKILISILE------ANRADDFSALIFVEQRQV-ASALAWLLPLVPELRDWVKAAAL 424
Query: 153 VG---------QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQ 203
VG + SG+ Q+ ++ FR+G N +IATSV EEGLD LV+ DA
Sbjct: 425 VGHGDGSRAGFEGSGMAHAAQRSTVRNFRSGSINLVIATSVAEEGLDFQACKLVVRLDAP 484
Query: 204 KSPIKMVQRLGRTGRKRNGRCVIL 227
++ + +Q GR RK + V+L
Sbjct: 485 QTMVGYLQSRGR-ARKHDSAYVVL 507
>gi|452839019|gb|EME40959.1| hypothetical protein DOTSEDRAFT_56023 [Dothistroma septosporum
NZE10]
Length = 1549
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 107 LESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-----PMVKASMFVGQSSGVTQ 161
L+ + RL E+ T + I+F + R + ++ L ++ +G + G
Sbjct: 433 LDHYLRLQFERESTHRAIVFVDRRYTARLLHNLYTRLRGQEGYEYLRGHFLIGSNGGSID 492
Query: 162 QE------QKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
++ Q + KFR GE N L ATSV EEGLD+ + +LVI FD + I+ VQ GR
Sbjct: 493 EDSFSFRQQVMTLMKFRKGELNCLFATSVAEEGLDVPDCNLVIRFDMYNTMIQYVQSRGR 552
Query: 216 TGRKRNGRCVILLTQGREAH 235
R ++ + + ++ G AH
Sbjct: 553 -ARNQHSKFIHMIENGNCAH 571
>gi|53713588|ref|YP_099580.1| ATP-dependent RNA helicase [Bacteroides fragilis YCH46]
gi|60681868|ref|YP_212012.1| ATP-dependent RNA helicase [Bacteroides fragilis NCTC 9343]
gi|265763909|ref|ZP_06092477.1| ATP-dependent RNA helicase [Bacteroides sp. 2_1_16]
gi|336409944|ref|ZP_08590426.1| hypothetical protein HMPREF1018_02442 [Bacteroides sp. 2_1_56FAA]
gi|375358679|ref|YP_005111451.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
gi|383118552|ref|ZP_09939293.1| hypothetical protein BSHG_2552 [Bacteroides sp. 3_2_5]
gi|423250187|ref|ZP_17231203.1| hypothetical protein HMPREF1066_02213 [Bacteroides fragilis
CL03T00C08]
gi|423255690|ref|ZP_17236619.1| hypothetical protein HMPREF1067_03263 [Bacteroides fragilis
CL03T12C07]
gi|423257252|ref|ZP_17238175.1| hypothetical protein HMPREF1055_00452 [Bacteroides fragilis
CL07T00C01]
gi|423265778|ref|ZP_17244781.1| hypothetical protein HMPREF1056_02468 [Bacteroides fragilis
CL07T12C05]
gi|423271549|ref|ZP_17250519.1| hypothetical protein HMPREF1079_03601 [Bacteroides fragilis
CL05T00C42]
gi|423275547|ref|ZP_17254491.1| hypothetical protein HMPREF1080_03144 [Bacteroides fragilis
CL05T12C13]
gi|423284322|ref|ZP_17263206.1| hypothetical protein HMPREF1204_02744 [Bacteroides fragilis HMW
615]
gi|52216453|dbj|BAD49046.1| ATP-dependent RNA helicase [Bacteroides fragilis YCH46]
gi|60493302|emb|CAH08086.1| putative ATP-dependent RNA helicase [Bacteroides fragilis NCTC
9343]
gi|251945856|gb|EES86263.1| hypothetical protein BSHG_2552 [Bacteroides sp. 3_2_5]
gi|263256517|gb|EEZ27863.1| ATP-dependent RNA helicase [Bacteroides sp. 2_1_16]
gi|301163360|emb|CBW22910.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
gi|335946325|gb|EGN08131.1| hypothetical protein HMPREF1018_02442 [Bacteroides sp. 2_1_56FAA]
gi|387778728|gb|EIK40823.1| hypothetical protein HMPREF1055_00452 [Bacteroides fragilis
CL07T00C01]
gi|392650483|gb|EIY44151.1| hypothetical protein HMPREF1067_03263 [Bacteroides fragilis
CL03T12C07]
gi|392653762|gb|EIY47414.1| hypothetical protein HMPREF1066_02213 [Bacteroides fragilis
CL03T00C08]
gi|392697245|gb|EIY90431.1| hypothetical protein HMPREF1079_03601 [Bacteroides fragilis
CL05T00C42]
gi|392701723|gb|EIY94879.1| hypothetical protein HMPREF1080_03144 [Bacteroides fragilis
CL05T12C13]
gi|392703436|gb|EIY96580.1| hypothetical protein HMPREF1056_02468 [Bacteroides fragilis
CL07T12C05]
gi|404579990|gb|EKA84702.1| hypothetical protein HMPREF1204_02744 [Bacteroides fragilis HMW
615]
Length = 418
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 12/154 (7%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK M+K + VG+ +Q Q+E IM +F++G N L+
Sbjct: 246 RVIIFASSKIKVKEVAKALK----MMKLN--VGEMHSDLEQVQREFIMHEFKSGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI FD V R+GRT R N + +E QT+
Sbjct: 300 ATDIVSRGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFVNEKE----QTN 355
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVT 274
+ ++++EK I + A L + P+ P T
Sbjct: 356 FKNIENFLEKEIYKIPVPAELGE-APQYNPRSYT 388
>gi|406864416|gb|EKD17461.1| putative Dicer-like protein 1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1827
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRV---VVAEIFDVLKPLEPMVKASMFVGQSSG---- 158
+L + R E+ K IIF N R ++A++F P ++ VG SG
Sbjct: 724 LLVRYLRERFERPTDDKAIIFVNQRYTARLLAKLFSQPNIGTPHLRCGTLVGTRSGDAGD 783
Query: 159 --VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
+ ++Q M FR G N L ATSV EEGLD+ + +LV+ FD + I+ +Q GR
Sbjct: 784 LNQSFRDQVLTMGNFRKGNINCLFATSVAEEGLDVPDCNLVVRFDLYTTLIQYIQSRGR- 842
Query: 217 GRKRNGRCVILLTQGREAH 235
R +N R + + G H
Sbjct: 843 ARHQNSRYIHMYEAGNTEH 861
>gi|158706457|sp|A1CBC9.2|DCL1_ASPCL RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1534
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVV---VAEIFDVLKPLEPMVKASMFVGQSSG---- 158
+L++ H TK IIF R + E+F +L P ++ + +G SG
Sbjct: 452 LLQTELSKHFSHAPETKCIIFTQKRYTAKTLHELFTILSI--PHLRPGVLIGVRSGDIGG 509
Query: 159 --VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
+T ++Q + KFR GE N L ATSV EEGLDI + +LV+ FD + I+ VQ GR
Sbjct: 510 MNITFRQQFLALVKFRKGEINCLFATSVAEEGLDIPDCNLVVRFDLYHTLIQYVQSRGRA 569
>gi|426200573|gb|EKV50497.1| hypothetical protein AGABI2DRAFT_64825 [Agaricus bisporus var.
bisporus H97]
Length = 1717
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 10/118 (8%)
Query: 122 KVIIFANYRVVVA---EIFDVLKPLEPMVKASMFVGQ---SSGV---TQQEQKEIMKKFR 172
+VI+F R V A +I V+ LE ++++ VGQ S GV T + ++ FR
Sbjct: 377 QVIVFVEQRQVAACLSKILPVIPGLEGKIRSAHLVGQGVNSDGVSKATDTYHGDAIQAFR 436
Query: 173 AGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
GE N LIATSV EEGLD DLV+ FD + + VQ GR R + R ++++ Q
Sbjct: 437 KGEVNVLIATSVAEEGLDFPACDLVVRFDPFRHMVGYVQSRGR-ARNADSRFIVMIRQ 493
>gi|121713724|ref|XP_001274473.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
gi|119402626|gb|EAW13047.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
Length = 1552
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSSG------ 158
+L++ H TK IIF R + ++ L P ++ + +G SG
Sbjct: 452 LLQTELSKHFSHAPETKCIIFTQKRYTAKTLHELFTILSIPHLRPGVLIGVRSGDIGGMN 511
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
+T ++Q + KFR GE N L ATSV EEGLDI + +LV+ FD + I+ VQ GR
Sbjct: 512 ITFRQQFLALVKFRKGEINCLFATSVAEEGLDIPDCNLVVRFDLYHTLIQYVQSRGRA 569
>gi|349605522|gb|AEQ00731.1| Interferon-induced helicase C domain-containing protein 1-like
protein, partial [Equus caballus]
Length = 530
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K +LR + H+ E+ + IIF R + I + K E VKA +G
Sbjct: 204 KLTKLRNTIMEHY---TRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIG 260
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 261 AGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 320
Query: 210 VQRLGRT 216
VQ GR
Sbjct: 321 VQARGRA 327
>gi|154301554|ref|XP_001551189.1| hypothetical protein BC1G_10104 [Botryotinia fuckeliana B05.10]
Length = 1842
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 18/147 (12%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRV---VVAEIFDVLKPLEPMVKASMFVGQ 155
K + L IL+ F ++ K I+F R ++A + + P +KA+ VG
Sbjct: 727 KVVALLSILKDRF----QRPTNDKCIVFVKERYTARLLASLLSTPEAGTPFLKAAPLVGT 782
Query: 156 SSG------VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+S +T + Q M FR G+ N LIATSV EEGLDI + +LV+ FD + I+
Sbjct: 783 TSASAGEMHITFRSQTLTMHNFRNGKINCLIATSVAEEGLDIPDCNLVVRFDLYNTVIQY 842
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHN 236
+Q GR R N R ++ E+HN
Sbjct: 843 IQSRGR-ARHINSRYYHMV----ESHN 864
>gi|113931550|ref|NP_001039224.1| nucleolar RNA helicase 2 [Xenopus (Silurana) tropicalis]
gi|89272468|emb|CAJ82454.1| novel GUCT (NUC152) domain containing DEAD/DEAH box helicase
[Xenopus (Silurana) tropicalis]
Length = 755
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 158 GVTQQEQKE-IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
G QQ+++E I+K FR G F L+AT+V GLDI E+DLV+ + A K V R GRT
Sbjct: 463 GDLQQKEREVILKGFRQGSFEVLVATNVAARGLDIPEVDLVVLYSAPKEADAYVHRSGRT 522
Query: 217 GRK-RNGRCVILLTQGREAH 235
GR R G C I L + RE H
Sbjct: 523 GRAGRTGIC-ISLYEPRERH 541
>gi|440468299|gb|ELQ37466.1| RNase3 domain-containing protein [Magnaporthe oryzae Y34]
gi|440485699|gb|ELQ65629.1| RNase3 domain-containing protein [Magnaporthe oryzae P131]
Length = 1658
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 102 RLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-----PMVKASMFVGQS 156
+L EIL F A G + I+F R + + + E P +K + +G
Sbjct: 439 KLIEILAECFS-QASAGNAIQCIVFVKRRDTAVLLNALCEQAEIRTKIPDLKGAFLIGAG 497
Query: 157 SG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
G T ++Q++ + +FR GE N L ATS+ EEGLDI ++VI FD + I+ +Q
Sbjct: 498 RGGNAAFTTTRQQEQTVSRFRDGEINCLFATSIAEEGLDIPGCNVVIRFDLHGTTIQYIQ 557
Query: 212 RLGRTGRKRNGRCVILLTQGREAHN 236
GR R RN + + G HN
Sbjct: 558 SRGR-ARMRNSWFIHMTEFGNPEHN 581
>gi|163916596|gb|AAI57756.1| LOC734085 protein [Xenopus (Silurana) tropicalis]
Length = 758
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 158 GVTQQEQKE-IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
G QQ+++E I+K FR G F L+AT+V GLDI E+DLV+ + A K V R GRT
Sbjct: 463 GDLQQKEREVILKGFRQGSFEVLVATNVAARGLDIPEVDLVVLYSAPKEADAYVHRSGRT 522
Query: 217 GRK-RNGRCVILLTQGREAH 235
GR R G C I L + RE H
Sbjct: 523 GRAGRTGIC-ISLYEPRERH 541
>gi|389633725|ref|XP_003714515.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
gi|158706447|sp|A4RKC3.2|DCL1_MAGO7 RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
gi|351646848|gb|EHA54708.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
Length = 1591
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 102 RLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-----PMVKASMFVGQS 156
+L EIL F A G + I+F R + + + E P +K + +G
Sbjct: 439 KLIEILAECFS-QASAGNAIQCIVFVKRRDTAVLLNALCEQAEIRTKIPDLKGAFLIGAG 497
Query: 157 SG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
G T ++Q++ + +FR GE N L ATS+ EEGLDI ++VI FD + I+ +Q
Sbjct: 498 RGGNAAFTTTRQQEQTVSRFRDGEINCLFATSIAEEGLDIPGCNVVIRFDLHGTTIQYIQ 557
Query: 212 RLGRTGRKRNGRCVILLTQGREAHN 236
GR R RN + + G HN
Sbjct: 558 SRGR-ARMRNSWFIHMTEFGNPEHN 581
>gi|389749088|gb|EIM90265.1| hypothetical protein STEHIDRAFT_93138 [Stereum hirsutum FP-91666
SS1]
Length = 1500
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 19/165 (11%)
Query: 92 EYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVV---VAEIFDVLKPLEPMVK 148
+ +W K L E+L + F A +G I+F R V +A + + L+ +V+
Sbjct: 364 DLSWCSPKVHVLVEVLRNQFT-PASQG-----IVFVEQRHVASGLARLLSKVDELKGVVR 417
Query: 149 ASMFVGQSS----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
+ FVG +S G+ EQ +++ FR N LIAT V EEGLD D+V+ FD+ +
Sbjct: 418 CAEFVGHASDTGEGMKAGEQNRVLESFRKRSINLLIATQVAEEGLDFPACDVVVRFDSIQ 477
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVE 249
+ VQ GR R ++ VI++ QG E T+++ K + E
Sbjct: 478 HLVGFVQSRGR-ARHKDSTFVIMVEQGDE-----TAIERYKRFAE 516
>gi|296424770|ref|XP_002841919.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638171|emb|CAZ86110.1| unnamed protein product [Tuber melanosporum]
Length = 1402
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 120 TTKVIIFANYR---VVVAEIFDVLKPLEPMVKASMFVGQSSG-------VTQQEQKEIMK 169
T K IIF + R V+ E+F LK ++ + +G +G T +EQ +
Sbjct: 340 TDKCIIFVSRRYTATVLGELFKWLK--IKYLQIGVLLGSLTGSRVPGTNFTLREQMITVS 397
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
KFR G+ N LIATSV EEGLDI + LVI FD ++ I+ VQ GR R + + +L
Sbjct: 398 KFRQGKLNCLIATSVAEEGLDIPDCSLVIRFDLYRTMIQYVQSRGR-ARSSVSKYIHMLE 456
Query: 230 QGREAH 235
G +H
Sbjct: 457 SGNRSH 462
>gi|452003006|gb|EMD95463.1| hypothetical protein COCHEDRAFT_1026333 [Cochliobolus
heterostrophus C5]
Length = 1592
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVG-----QSSGVTQQEQKE 166
L+ E+ + + I+F R + + + P ++ S+ VG ++ + Q
Sbjct: 458 LYYERSDEARCIVFVEQRQTARLLQLIFSQIGGPHLRCSVLVGINTSEHEQNISLRNQIL 517
Query: 167 IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVI 226
+ KFR GE N L ATSV EEGLDI + +LV+ FD ++ I VQ GR R RN + +
Sbjct: 518 TVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIAYVQSRGR-ARHRNSKYLH 576
Query: 227 LLTQGREAH 235
++ +G H
Sbjct: 577 MIEEGNHDH 585
>gi|398844840|ref|ZP_10601893.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM84]
gi|398254166|gb|EJN39270.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM84]
Length = 440
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K IIF N R + I+ L + VKA + G+ Q+++K +++F+ G L+A
Sbjct: 245 KAIIFTNTRALADRIYGHLVAKD--VKAFVLHGEKD---QKDRKLAIERFKQGSSKVLVA 299
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN-GRCVILLTQGREAHNFQTS 240
T V GLDI +DLVI FD +S + V R+GRTGR G + L+T HN
Sbjct: 300 TDVAARGLDIDGLDLVINFDMPRSGDEYVHRIGRTGRAGGEGLAISLIT-----HNDWNL 354
Query: 241 MQTCKSYVEKIINNKSI-YANLAKNGPRMIPA 271
M + + Y+++ + I NGP+ + A
Sbjct: 355 MSSIERYLKQQFERRVIKEVKGTYNGPKKVKA 386
>gi|410981129|ref|XP_003996925.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Felis catus]
Length = 667
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 17/119 (14%)
Query: 147 VKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFD 201
++A + +G Q++ +TQ++Q+E+++KFRAG N L+ATSV EEGLDI + ++V+ +
Sbjct: 387 IRADLLIGAGNNSQNTHMTQRDQQEVIRKFRAGILNLLVATSVAEEGLDIPQCNVVVRYG 446
Query: 202 AQKSPIKMVQRLGRTGRKRNGRCV--ILLTQG-----REAHN--FQTSMQTCKSYVEKI 251
+ I MVQ GR R G+ V + TQG RE N +T M+ + V+K+
Sbjct: 447 LLTNEISMVQ---ARGRARAGQSVYSFVATQGSRELRRELTNEALETLMERAVAAVQKM 502
>gi|258653503|ref|YP_003202659.1| DEAD/DEAH box helicase [Nakamurella multipartita DSM 44233]
gi|258556728|gb|ACV79670.1| DEAD/DEAH box helicase domain protein [Nakamurella multipartita DSM
44233]
Length = 607
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
V Q+E+++I+++ R G + L+AT V GLD+ IDLV+ FDA P V R+GRTGR
Sbjct: 299 VPQKEREKIIERLRDGRLDVLVATDVAARGLDVDRIDLVVNFDAPGEPEAYVHRIGRTGR 358
Query: 219 K-RNGRCVILLTQGREAHNFQTSMQTCKSYVEKII 252
R G + T RE + + + +E+I+
Sbjct: 359 AGRTGTALTFFTP-REMGRLRAIERATRGTLEQIV 392
>gi|115401870|ref|XP_001216523.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190464|gb|EAU32164.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1635
Score = 67.8 bits (164), Expect = 9e-09, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 24/229 (10%)
Query: 16 HINRDLDRMIQRDFHVTHSLAS-ALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQ 74
+ N L R ++R H+ L A++ + +R K D S +L DN+ +
Sbjct: 259 YCNESLRRFVERSCHIFQELGGWAVDYFIHASIRRLR------EKIDDSALMLDWDNEEK 312
Query: 75 NLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVA 134
L +I + S+ FI ++ L + T +IFA R V
Sbjct: 313 EYLASFLS--NIATIQSDPPRRPEDFIPSPKLEALISFLSSTDDSTFSGLIFAKQRATVT 370
Query: 135 EIFDVLKPLEPMVK----ASMFVGQSSG----------VTQQEQKEIMKKFRAGEFNTLI 180
+ L + P+ K + FVG S G ++ Q Q++ + +FR+G+ N ++
Sbjct: 371 -VLATLLSVHPLTKDRFRCAAFVGWSGGGNRKDLIGELLSMQMQRDTLSEFRSGQKNLIV 429
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
AT V EEG+DI +VIC+D + VQR GR RK + ++ T
Sbjct: 430 ATDVLEEGIDISACSVVICYDKPANVKSFVQRRGRARRKESTFAILFST 478
>gi|317477042|ref|ZP_07936284.1| DEAD/DEAH box helicase [Bacteroides eggerthii 1_2_48FAA]
gi|316906835|gb|EFV28547.1| DEAD/DEAH box helicase [Bacteroides eggerthii 1_2_48FAA]
Length = 428
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 113 LHAEKGETT--KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMK 169
+H+ E T +VIIFA+ ++ V E+ LK ++ + VG+ S + Q +++E+M
Sbjct: 235 IHSLFAEQTPERVIIFASSKLKVKEVTKALKQMK------LNVGEMHSDLEQAQREEVMY 288
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
+F+AG N L+AT + G+DI +I LVI +D V R+GRT R N +
Sbjct: 289 EFKAGRINILVATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVALTFV 348
Query: 230 QGREAHNFQ 238
+E NF+
Sbjct: 349 NEKEQTNFK 357
>gi|90023351|ref|YP_529178.1| putative ATP-dependent RNA helicase [Saccharophagus degradans 2-40]
gi|89952951|gb|ABD82966.1| DEAD/DEAH box helicase-like protein [Saccharophagus degradans 2-40]
Length = 436
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 112 RLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ--SSGVTQQEQKEIMK 169
+L AE+ + +VI+F N R+ ++ ++L+ A+ V + VTQ ++K++M
Sbjct: 236 KLIAEE-DAQRVIVFCNTRLQCQKVSNILR-------ANKLVSEYIHGEVTQSDRKQVMN 287
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
+F G+ L+AT V GLDI ++DLVI F A + + V R+GRTGR I L
Sbjct: 288 RFIDGKIRVLVATDVAARGLDIKDVDLVINFSAAFTGDEHVHRVGRTGRSDKTGLAITLI 347
Query: 230 QGREAHNFQTSMQTCKSYVE-KIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRV 288
+E + M + + Y++ ++I K NGP+ + +
Sbjct: 348 SPKEFN----PMSSIERYLKIRLIPRKVKGLEGTYNGPKKLKSSGKAAGPKKKKTKTTAG 403
Query: 289 TPAK--PSKKKPKENEKANKKSKKKLETDGNSEP 320
P K PSKK P++ K+S K+ SEP
Sbjct: 404 KPGKKLPSKKDPQK-----KRSAPKVNLGDGSEP 432
>gi|149730873|ref|XP_001494380.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Equus caballus]
Length = 1022
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K +LR + H+ E+ + IIF R + I + K E VKA +G
Sbjct: 696 KLTKLRNTIMEHY---TRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIG 752
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 753 AGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 812
Query: 210 VQRLGRT 216
VQ GR
Sbjct: 813 VQARGRA 819
>gi|336270596|ref|XP_003350057.1| hypothetical protein SMAC_00946 [Sordaria macrospora k-hell]
gi|380095449|emb|CCC06922.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1586
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 75/151 (49%), Gaps = 19/151 (12%)
Query: 99 KFIRLREILESHFRLHAEKG-ETTKVIIFANYRVVVAEIFDVL-----KPLEPMVKASMF 152
K I L IL F E G T + I+F R + D+L K P + A +
Sbjct: 448 KVIMLVRILRDQF----ETGVGTQRCIVFVRQRNTAMLLADLLQQPGIKSHIPSIVAEVL 503
Query: 153 VG---QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
VG SG V Q+Q I++KF+ GE N L ATSV EEGLDI + ++VI FD
Sbjct: 504 VGGGTTGSGYVNAKVNFQQQNRIIRKFKLGEINCLFATSVAEEGLDIPDCNIVIRFDLYD 563
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
+ I+ +Q GR R+ + R + ++ +G H
Sbjct: 564 TLIQYIQSRGR-ARRPDSRYIQMIEKGNPEH 593
>gi|358372963|dbj|GAA89564.1| pre-mRNA-processing ATP-dependent RNA helicase Prp5 [Aspergillus
kawachii IFO 4308]
Length = 1178
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + +++ E + +IF + + E D L E M K + G
Sbjct: 778 KFVRLLELLGNLY--SSDENEDARALIFVDRQ----EAADALL-RELMRKGYPCMSIHGG 830
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ ++ F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 831 KDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 890
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIIN 253
N G V LT+ +E A + S Q V+K+++
Sbjct: 891 AGNTGTAVTFLTEDQERYSVDIAKALKQSGQKVPEPVQKLVD 932
>gi|189465693|ref|ZP_03014478.1| hypothetical protein BACINT_02054 [Bacteroides intestinalis DSM
17393]
gi|189433957|gb|EDV02942.1| DEAD/DEAH box helicase [Bacteroides intestinalis DSM 17393]
Length = 428
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK M+K + VG+ S + Q +++E+M +F+AG N L+
Sbjct: 246 RVIIFASSKLKVKEVTKALK----MMKLN--VGEMHSDLEQAQREEVMHEFKAGRVNILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
AT + G+DI +I LVI +D V R+GRT R N + +E NF+
Sbjct: 300 ATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVALTFINEKEQSNFK 357
>gi|317030312|ref|XP_001392304.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Aspergillus
niger CBS 513.88]
gi|143359932|sp|A2QQA8.2|PRP5_ASPNC RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
Length = 1180
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + +++ E + +IF + + E D L E M K + G
Sbjct: 780 KFVRLLELLGNLY--SSDENEDARALIFVDRQ----EAADALL-RELMRKGYPCMSIHGG 832
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ ++ F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 833 KDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 892
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIIN 253
N G V LT+ +E A + S Q V+K+++
Sbjct: 893 AGNTGTAVTFLTEDQERYSVDIAKALKQSGQKVPEPVQKLVD 934
>gi|134076811|emb|CAK39865.1| unnamed protein product [Aspergillus niger]
Length = 1191
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + +++ E + +IF + + E D L E M K + G
Sbjct: 791 KFVRLLELLGNLY--SSDENEDARALIFVDRQ----EAADALL-RELMRKGYPCMSIHGG 843
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ ++ F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 844 KDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 903
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIIN 253
N G V LT+ +E A + S Q V+K+++
Sbjct: 904 AGNTGTAVTFLTEDQERYSVDIAKALKQSGQKVPEPVQKLVD 945
>gi|291391627|ref|XP_002712267.1| PREDICTED: interferon induced with helicase C domain 1 [Oryctolagus
cuniculus]
Length = 1022
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 67/128 (52%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K I+LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 697 KLIKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 752
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E +++I + + I
Sbjct: 753 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNVIIRYGLVTNEIA 812
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 813 MVQARGRA 820
>gi|350629482|gb|EHA17855.1| hypothetical protein ASPNIDRAFT_55865 [Aspergillus niger ATCC 1015]
Length = 1198
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + +++ E + +IF + + E D L E M K + G
Sbjct: 798 KFVRLLELLGNLY--SSDENEDARALIFVDRQ----EAADALL-RELMRKGYPCMSIHGG 850
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ ++ F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 851 KDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 910
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIIN 253
N G V LT+ +E A + S Q V+K+++
Sbjct: 911 AGNTGTAVTFLTEDQERYSVDIAKALKQSGQKVPEPVQKLVD 952
>gi|358383044|gb|EHK20713.1| hypothetical protein TRIVIDRAFT_171147, partial [Trichoderma virens
Gv29-8]
Length = 1373
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 14/142 (9%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYR---VVVAEIFDVLKPLEPMVKASMFVGQ---- 155
L E+LE F K + + I+F R ++A++F P +KA+ +G
Sbjct: 279 LYEVLEDAFC----KRQAKRCIVFVEARSTAFLLADLFQQPGMEIPGMKAAYMIGSHTST 334
Query: 156 --SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
++ ++ ++Q ++KFR GE N L ATSV EEG+DI E D++I FD S I+ +Q
Sbjct: 335 ASAAYMSYRDQIMSLQKFRYGETNCLFATSVAEEGIDIPECDVIIRFDLYTSAIQYIQSK 394
Query: 214 GRTGRKRNGRCVILLTQGREAH 235
GR R+++ V ++ +G H
Sbjct: 395 GR-ARQKSSLYVSMMEEGNLEH 415
>gi|332879243|ref|ZP_08446940.1| DEAD/DEAH box helicase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357048063|ref|ZP_09109641.1| DEAD/DEAH box helicase [Paraprevotella clara YIT 11840]
gi|332682663|gb|EGJ55563.1| DEAD/DEAH box helicase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355529128|gb|EHG98582.1| DEAD/DEAH box helicase [Paraprevotella clara YIT 11840]
Length = 448
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG-QSSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V ++ L +A VG S + QQE+ E+M KF+A + + L+
Sbjct: 246 RVIIFASSKLKVKDMAIALG------RAGFKVGAMHSDLEQQERDEVMYKFKAQQIDVLV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI FD V R+GRT R N I L ++ F
Sbjct: 300 ATDIVARGIDIDDIQLVINFDVPHDAEDYVHRIGRTARANNDGEAITLVSEKDQQRF--- 356
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKE 300
+ + ++E I + + L + PA+ P+ R + K+ +
Sbjct: 357 -ASIEHFLETEIEKRPLPEGLGEG-----PAY-RPKEGGEKRYGGRRNQGHRNGYKRRNK 409
Query: 301 NEKANKKSKKKLETDGNSEPAGKQNKTNAKKTKKQPMMTQSND 343
N+ +S+KK + NS +++ N K KQP +++D
Sbjct: 410 NQSKEGQSQKKARPNANS----RRSTANRDKKAKQPQEKKASD 448
>gi|212693337|ref|ZP_03301465.1| hypothetical protein BACDOR_02849 [Bacteroides dorei DSM 17855]
gi|423238539|ref|ZP_17219655.1| hypothetical protein HMPREF1065_00278 [Bacteroides dorei
CL03T12C01]
gi|212664102|gb|EEB24674.1| DEAD/DEAH box helicase [Bacteroides dorei DSM 17855]
gi|392648222|gb|EIY41912.1| hypothetical protein HMPREF1065_00278 [Bacteroides dorei
CL03T12C01]
Length = 423
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ K + + VG+ +Q Q+E IM++F++G N LI
Sbjct: 246 RVIIFASSKLKVKEVTQAFK------RMKLNVGEMHSDLEQSQREQIMREFKSGRINILI 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
AT + G+DI +I LVI +D V R+GRT R + C I +E F+
Sbjct: 300 ATDIVSRGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANHDGCAITFVSEKEQTQFKA 358
>gi|169781778|ref|XP_001825352.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Aspergillus
oryzae RIB40]
gi|91207409|sp|Q2U2J6.1|PRP5_ASPOR RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|83774094|dbj|BAE64219.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1186
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KFIRL E+L + + ++ E + +IF + E D L E M K + G
Sbjct: 787 KFIRLLELLGNLY--STDENEDARALIFVERQ----EGADTLL-RELMRKGYPCMSIHGG 839
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ ++ F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 840 KDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 899
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIINN 254
N G V LT+ +E A + S Q+ V+K++++
Sbjct: 900 AGNTGTAVTFLTEDQERYSVDIAKALKQSGQSVPEPVQKMVDS 942
>gi|319640865|ref|ZP_07995576.1| ATP-dependent RNA helicase [Bacteroides sp. 3_1_40A]
gi|345519525|ref|ZP_08798945.1| ATP-dependent RNA helicase [Bacteroides sp. 4_3_47FAA]
gi|254836893|gb|EET17202.1| ATP-dependent RNA helicase [Bacteroides sp. 4_3_47FAA]
gi|317387502|gb|EFV68370.1| ATP-dependent RNA helicase [Bacteroides sp. 3_1_40A]
Length = 425
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ K + + VG+ +Q Q+E IM++F++G N LI
Sbjct: 246 RVIIFASSKLKVKEVTQAFK------RMKLNVGEMHSDLEQSQREQIMREFKSGRINILI 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
AT + G+DI +I LVI +D V R+GRT R + C I +E F+
Sbjct: 300 ATDIVSRGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANHDGCAITFVSEKEQTQFKA 358
>gi|218131071|ref|ZP_03459875.1| hypothetical protein BACEGG_02675 [Bacteroides eggerthii DSM 20697]
gi|217986775|gb|EEC53108.1| DEAD/DEAH box helicase [Bacteroides eggerthii DSM 20697]
Length = 428
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK ++ + VG+ S + Q +++E+M +F+AG N L+
Sbjct: 246 RVIIFASSKLKVKEVTKALKQMK------LNVGEMHSDLEQAQREEVMYEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
AT + G+DI +I LVI +D V R+GRT R N + +E NF+
Sbjct: 300 ATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVALTFVNEKEQTNFK 357
>gi|402900290|ref|XP_003913111.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Papio anubis]
Length = 578
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG 154
K L +IL+ FR ++ + IIF R + L+ + ++A + +G
Sbjct: 343 KLEMLEKILQRQFR----SSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRAQLLIG 398
Query: 155 -----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
QS+ +TQ++Q+E+++KFR G N L+ATSV EEGLDI + ++V+ + + I M
Sbjct: 399 AGNSSQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISM 458
Query: 210 VQRLGRT 216
VQ GR
Sbjct: 459 VQARGRA 465
>gi|391865375|gb|EIT74659.1| RNA helicase [Aspergillus oryzae 3.042]
Length = 1186
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KFIRL E+L + + ++ E + +IF + E D L E M K + G
Sbjct: 787 KFIRLLELLGNLY--STDENEDARALIFVERQ----EGADTLL-RELMRKGYPCMSIHGG 839
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ ++ F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 840 KDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 899
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIINN 254
N G V LT+ +E A + S Q+ V+K++++
Sbjct: 900 AGNTGTAVTFLTEDQERYSVDIAKALKQSGQSVPEPVQKMVDS 942
>gi|281207108|gb|EFA81291.1| RNA-directed RNA polymerase [Polysphondylium pallidum PN500]
Length = 2852
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 124 IIFANYRVVVAEIFDVLK--PLEPMVKASMFVGQSS--GVTQQEQKEIMKKFRAGEFNTL 179
IIF R + +LK P+ V A + VG + G+ ++Q+ IM KFR G+ L
Sbjct: 781 IIFVKKRSTSRSLVHMLKKEPINSKVNAKIIVGHNGEDGMDSEKQERIMVKFREGQSKLL 840
Query: 180 IATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNG 222
+ATSV EEG+D+ + V+CFD M+QR GR K G
Sbjct: 841 VATSVLEEGIDVNTCNFVLCFDDDLDMRSMIQRRGRARNKEEG 883
>gi|327283103|ref|XP_003226281.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Anolis carolinensis]
Length = 1006
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKP----LEPMVKASMFVGQSSG 158
LRE L + F K + IIF R +++ +K E VKA +G
Sbjct: 682 LRETLMTEFT----KKPEARGIIFTKTRQSAFALYEWIKENPKFEEAGVKAHYLIGAGHN 737
Query: 159 -----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
+TQ EQK++++KFR G+ N LIAT+V EEGLDI E ++VI + + I MVQ
Sbjct: 738 SEFKPMTQNEQKDVIEKFRIGKINLLIATTVAEEGLDIPECNIVIRYGLVTNEIAMVQAR 797
Query: 214 GRTGRKRNGRCVILLTQGREA 234
GR R V++ + G A
Sbjct: 798 GR-ARADESTYVLVASGGSGA 817
>gi|297273051|ref|XP_002800519.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like isoform 2
[Macaca mulatta]
Length = 661
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 13/123 (10%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG---- 154
L +IL+ FR ++ + IIF R + L+ + ++A + +G
Sbjct: 337 LEKILQRQFR----SSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRAQLLIGAGNS 392
Query: 155 -QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
QS+ +TQ++Q+E+++KFR G N L+ATSV EEGLDI + ++V+ + + I MVQ
Sbjct: 393 SQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQAR 452
Query: 214 GRT 216
GR
Sbjct: 453 GRA 455
>gi|294776591|ref|ZP_06742061.1| DEAD/DEAH box helicase [Bacteroides vulgatus PC510]
gi|294449579|gb|EFG18109.1| DEAD/DEAH box helicase [Bacteroides vulgatus PC510]
Length = 425
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ K + + VG+ +Q Q+E IM++F++G N LI
Sbjct: 246 RVIIFASSKLKVKEVTQAFK------RMKLNVGEMHSDLEQSQREQIMREFKSGRINILI 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
AT + G+DI +I LVI +D V R+GRT R + C I +E F+
Sbjct: 300 ATDIVSRGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANHDGCAITFVSEKEQPQFKA 358
>gi|150005667|ref|YP_001300411.1| ATP-dependent RNA helicase [Bacteroides vulgatus ATCC 8482]
gi|423315247|ref|ZP_17293178.1| hypothetical protein HMPREF1058_03790 [Bacteroides vulgatus
CL09T03C04]
gi|149934091|gb|ABR40789.1| ATP-dependent RNA helicase [Bacteroides vulgatus ATCC 8482]
gi|392680264|gb|EIY73637.1| hypothetical protein HMPREF1058_03790 [Bacteroides vulgatus
CL09T03C04]
Length = 425
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ K + + VG+ +Q Q+E IM++F++G N LI
Sbjct: 246 RVIIFASSKLKVKEVTQAFK------RMKLNVGEMHSDLEQSQREQIMREFKSGRINILI 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
AT + G+DI +I LVI +D V R+GRT R + C I +E F+
Sbjct: 300 ATDIVSRGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANHDGCAITFVSEKEQTQFKA 358
>gi|383412907|gb|AFH29667.1| putative ATP-dependent RNA helicase DHX58 [Macaca mulatta]
Length = 678
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 13/123 (10%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG---- 154
L +IL+ FR ++ + IIF R + L+ + ++A + +G
Sbjct: 354 LEKILQRQFR----SSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRAQLLIGAGNS 409
Query: 155 -QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
QS+ +TQ++Q+E+++KFR G N L+ATSV EEGLDI + ++V+ + + I MVQ
Sbjct: 410 SQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQAR 469
Query: 214 GRT 216
GR
Sbjct: 470 GRA 472
>gi|237710076|ref|ZP_04540557.1| ATP-dependent RNA helicase [Bacteroides sp. 9_1_42FAA]
gi|265753725|ref|ZP_06089080.1| ATP-dependent RNA helicase [Bacteroides sp. 3_1_33FAA]
gi|345515323|ref|ZP_08794827.1| ATP-dependent RNA helicase [Bacteroides dorei 5_1_36/D4]
gi|423231344|ref|ZP_17217747.1| hypothetical protein HMPREF1063_03567 [Bacteroides dorei
CL02T00C15]
gi|423245933|ref|ZP_17227006.1| hypothetical protein HMPREF1064_03212 [Bacteroides dorei
CL02T12C06]
gi|229437984|gb|EEO48061.1| ATP-dependent RNA helicase [Bacteroides dorei 5_1_36/D4]
gi|229456169|gb|EEO61890.1| ATP-dependent RNA helicase [Bacteroides sp. 9_1_42FAA]
gi|263235439|gb|EEZ20963.1| ATP-dependent RNA helicase [Bacteroides sp. 3_1_33FAA]
gi|392628230|gb|EIY22263.1| hypothetical protein HMPREF1063_03567 [Bacteroides dorei
CL02T00C15]
gi|392637439|gb|EIY31307.1| hypothetical protein HMPREF1064_03212 [Bacteroides dorei
CL02T12C06]
Length = 423
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ K + + VG+ +Q Q+E IM++F++G N LI
Sbjct: 246 RVIIFASSKLKVKEVTQAFK------RMKLNVGEMHSDLEQSQREQIMREFKSGRINILI 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQT 239
AT + G+DI +I LVI +D V R+GRT R + C I +E F+
Sbjct: 300 ATDIVSRGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANHDGCAITFVSEKEQTQFKA 358
>gi|288926741|ref|ZP_06420652.1| ATP-dependent RNA helicase DeaD [Prevotella buccae D17]
gi|288336471|gb|EFC74846.1| ATP-dependent RNA helicase DeaD [Prevotella buccae D17]
Length = 579
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
Query: 118 GETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEF 176
G+ +VIIF ++ V ++ L+ + + G+ S + Q E+ +IM KF++G+
Sbjct: 243 GDLKRVIIFCGSKMKVKQVNAALQ------RKHINCGEMHSDLEQAERDDIMFKFKSGQL 296
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCVILLTQGREAH 235
+ L+AT + G+DI +I +VI +D V R+GRT R R+GR + L+++ + +
Sbjct: 297 DVLVATDIVARGIDIDDIAMVINYDVPHDAEDYVHRIGRTARADRDGRAITLVSED-DIY 355
Query: 236 NFQTSMQTCKSYVEKI 251
+FQ + + VEKI
Sbjct: 356 HFQQIEKFLEKEVEKI 371
>gi|401881497|gb|EJT45796.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 2479]
gi|406696503|gb|EKC99788.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 1120
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 7/136 (5%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF RL EIL + H ++ + +V+IF + + E+F L + + + G
Sbjct: 685 KFNRLLEILGEIGQDHPDEPDY-RVLIFVDRQESADELFREL-----LQRGYLCTSLHGG 738
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++++ ++ F++G+ +IATSV GLD+ ++ LVI +DA V R GRTGR
Sbjct: 739 KDQVDREDAIRNFKSGDIPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGR 798
Query: 219 KRN-GRCVILLTQGRE 233
N G C+ +T +E
Sbjct: 799 AGNTGTCITFITPDQE 814
>gi|423277384|ref|ZP_17256298.1| hypothetical protein HMPREF1203_00515 [Bacteroides fragilis HMW
610]
gi|404587133|gb|EKA91683.1| hypothetical protein HMPREF1203_00515 [Bacteroides fragilis HMW
610]
Length = 418
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK M+K + VG+ +Q Q+E IM +F++G N L+
Sbjct: 246 RVIIFASSKLKVKEVAKALK----MMKLN--VGEMHSDLEQAQREFIMHEFKSGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI FD V R+GRT R N + +E QT+
Sbjct: 300 ATDIVSRGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFVNEKE----QTN 355
Query: 241 MQTCKSYVEKII 252
+ ++++EK I
Sbjct: 356 FKNIENFLEKEI 367
>gi|402305029|ref|ZP_10824089.1| putative cold-shock DEAD-box protein A [Prevotella sp. MSX73]
gi|400380471|gb|EJP33289.1| putative cold-shock DEAD-box protein A [Prevotella sp. MSX73]
Length = 579
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
Query: 118 GETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEF 176
G+ +VIIF ++ V ++ L+ + + G+ S + Q E+ +IM KF++G+
Sbjct: 243 GDLKRVIIFCGSKMKVKQVNAALQ------RKHINCGEMHSDLEQAERDDIMFKFKSGQL 296
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCVILLTQGREAH 235
+ L+AT + G+DI +I +VI +D V R+GRT R R+GR + L+++ + +
Sbjct: 297 DVLVATDIVARGIDIDDIAMVINYDVPHDAEDYVHRIGRTARADRDGRAITLVSED-DIY 355
Query: 236 NFQTSMQTCKSYVEKI 251
+FQ + + VEKI
Sbjct: 356 HFQQIEKFLEKEVEKI 371
>gi|321252102|ref|XP_003192288.1| pre-mRNA splicing factor [Cryptococcus gattii WM276]
gi|317458756|gb|ADV20501.1| pre-mRNA splicing factor, putative [Cryptococcus gattii WM276]
Length = 1063
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF RL EIL H ++ + + +IF + + ++F L + + + G
Sbjct: 627 KFTRLLEILGEMGEEHKDE-DDFRALIFVDRQESADDLFREL-----LQRGYVCASLHGG 680
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ E +K F+ G+ ++ATSV GLD+ E+ LVI +DA V R GRTGR
Sbjct: 681 KEQVDRDEAIKNFKNGDVPIIVATSVAARGLDVKELKLVINYDAPNHMEDYVHRAGRTGR 740
Query: 219 KRN-GRCVILLT--QGREAHNFQTSMQTCKSYV 248
N G C+ +T Q R + + +++ K+++
Sbjct: 741 AGNKGTCITFITPEQERFSVDIVRALEASKAFI 773
>gi|313147103|ref|ZP_07809296.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|424663494|ref|ZP_18100531.1| hypothetical protein HMPREF1205_03880 [Bacteroides fragilis HMW
616]
gi|313135870|gb|EFR53230.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|404577184|gb|EKA81922.1| hypothetical protein HMPREF1205_03880 [Bacteroides fragilis HMW
616]
Length = 418
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK M+K + VG+ +Q Q+E IM +F++G N L+
Sbjct: 246 RVIIFASSKLKVKEVAKALK----MMKLN--VGEMHSDLEQAQREFIMHEFKSGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI FD V R+GRT R N + +E QT+
Sbjct: 300 ATDIVSRGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFVNEKE----QTN 355
Query: 241 MQTCKSYVEKII 252
+ ++++EK I
Sbjct: 356 FKNIENFLEKEI 367
>gi|157285013|gb|ABV31246.1| dicer-like 4 [Physcomitrella patens]
Length = 1445
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 39/192 (20%)
Query: 46 GLRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLRE 105
L SF + VE + SC + ++QNL K +L IN++ R R+
Sbjct: 356 ALNSFLSKEVEAT----SCAVPDGAANIQNLSS--KVQLLINVLE-----------RCRD 398
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG---VTQQ 162
E + E+ TT+V+ A + ++ L P + G++SG + +
Sbjct: 399 TNEMRCIIFVERKITTRVL---------ASLLSSIEVLSPAFRFQSLAGKNSGSNDMNHK 449
Query: 163 EQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNG 222
Q+ +++ FR GE N L++T+V EEGLDI LVI FD +P ++Q GR
Sbjct: 450 HQQNVVESFRNGEVNVLVSTNVAEEGLDIQNCHLVIRFDLPNTPCSLIQSRGR------A 503
Query: 223 RC----VILLTQ 230
RC +I LT+
Sbjct: 504 RCLKSTIIYLTE 515
>gi|452988240|gb|EME87995.1| hypothetical protein MYCFIDRAFT_104430, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1360
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 17/136 (12%)
Query: 105 EILESHFRLHAEKGETTKVIIFANYRVVV---AEIFDVLKPLEPMVKASMFVGQSSG--- 158
E+LE + HA+ + + IIF RV+V AE L L + + FVG S+
Sbjct: 356 ELLELLLK-HADP--SLRGIIFVEQRVLVTALAEWLRGLPQLNDQYQIAAFVGTSTSTNR 412
Query: 159 -------VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
VT Q+Q ++ FR GE N ++AT+V EEG+DI +LVICFD ++ + VQ
Sbjct: 413 KISVADLVTLQDQARDLEAFRRGEKNLMVATNVLEEGIDISACNLVICFDPPQNLVSFVQ 472
Query: 212 RLGRTGRKRNGRCVIL 227
R GR R+++ + I
Sbjct: 473 RRGR-ARQQHSKYFIF 487
>gi|315604272|ref|ZP_07879338.1| ATP-dependent RNA helicase [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313978|gb|EFU62029.1| ATP-dependent RNA helicase [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 699
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 114 HAEKG--ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKF 171
H +G E I+F R V E+ LE + G S V Q E++ ++++
Sbjct: 277 HIARGQEEADAAIVFVRTRADVEEV-----SLELSARGFRAAGISGDVAQTERERMVERL 331
Query: 172 RAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLT 229
+ G + L+AT V GLD+ I LV+ FD + P V R+GRTGR R GR + T
Sbjct: 332 KTGALDVLVATDVAARGLDVERISLVVNFDVPREPEAYVHRIGRTGRAGRQGRALTFFT 390
>gi|109115463|ref|XP_001108799.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like isoform 1
[Macaca mulatta]
gi|355568695|gb|EHH24976.1| Putative ATP-dependent RNA helicase DHX58 [Macaca mulatta]
Length = 678
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 13/123 (10%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG---- 154
L +IL+ FR ++ + IIF R + L+ + ++A + +G
Sbjct: 354 LEKILQRQFR----SSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRAQLLIGAGNS 409
Query: 155 -QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
QS+ +TQ++Q+E+++KFR G N L+ATSV EEGLDI + ++V+ + + I MVQ
Sbjct: 410 SQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQAR 469
Query: 214 GRT 216
GR
Sbjct: 470 GRA 472
>gi|355754175|gb|EHH58140.1| Putative ATP-dependent RNA helicase DHX58 [Macaca fascicularis]
Length = 678
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 13/123 (10%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG---- 154
L +IL+ FR ++ + IIF R + L+ + ++A + +G
Sbjct: 354 LEKILQRQFR----SSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRAQLLIGAGNS 409
Query: 155 -QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
QS+ +TQ++Q+E+++KFR G N L+ATSV EEGLDI + ++V+ + + I MVQ
Sbjct: 410 SQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQAR 469
Query: 214 GRT 216
GR
Sbjct: 470 GRA 472
>gi|167035034|ref|YP_001670265.1| DEAD/DEAH box helicase [Pseudomonas putida GB-1]
gi|166861522|gb|ABY99929.1| DEAD/DEAH box helicase domain protein [Pseudomonas putida GB-1]
Length = 453
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K IIF N R + I+ L + VKA + G+ Q+++K +++F+ G L+A
Sbjct: 258 KAIIFTNTRAMADRIYGHLVAKD--VKAFVLHGEKD---QKDRKLAIERFKQGSSKVLVA 312
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN-GRCVILLTQGREAHNFQTS 240
T V GLDI +DLVI FD +S + V R+GRTGR G + L+T HN
Sbjct: 313 TDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLIT-----HNDWNL 367
Query: 241 MQTCKSYVEKIINNKSI-YANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPK 299
M + + Y+++ + I +GP+ + A V K +K+KP
Sbjct: 368 MSSIERYLKQQFERRVIKEVKGTYSGPKKVKASGKAVGAKKKKVDKKTGDKKAAAKRKPT 427
Query: 300 ENEKAN 305
+AN
Sbjct: 428 AKPRAN 433
>gi|334303056|gb|AEG75816.1| retinoic acid inducible protein I [Anser anser]
Length = 933
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 18/163 (11%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK--PLEPMVKASMFVG-- 154
K L IL+ +R + + T+ ++FA R +VA + ++ P+ +K + +G
Sbjct: 611 KLEELACILDDAYRYNPQ----TRTLLFAKARALVAALKKCMEENPILSYIKPDVLMGRG 666
Query: 155 ---QSSGVTQQEQKEIMKKFRAG-EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
Q +G+T QK ++ F+ + LIATSV +EG+DI + +LV+ ++ + KM+
Sbjct: 667 RRDQKTGMTLPSQKGVLDAFKTSKDSRLLIATSVADEGIDIAQCNLVVLYEYSGNVTKMI 726
Query: 211 QRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIIN 253
Q GR GR +C+++ ++ N + C Y E+++N
Sbjct: 727 QVRGR-GRAAGSKCILVTSKTEVVEN-----EKCNRYKEEMMN 763
>gi|405958476|gb|EKC24603.1| Putative ATP-dependent RNA helicase DDX58 [Crassostrea gigas]
Length = 1198
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 22/173 (12%)
Query: 70 DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANY 129
D L++ ++ + +L M ++ ++ K + LR ++ F A+ ++ IIF
Sbjct: 841 DRKLRSFFEKTQGRLQTYTMDPDH--NNPKLMELRRLILQAFGNDAD----SRGIIFVRT 894
Query: 130 RVVVAEIF------DVLKPLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFNT 178
R +V I D L+ L+P+ MF G + G+T+ +Q + + F+ G
Sbjct: 895 RDLVKAIHRWMMETDDLRHLKPV----MFTGAQAKSSAGGMTKVQQIDALSLFKEGRHKI 950
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
+IATSV EEGLDI + +LVI + + I MVQ GR GR+ NG+ ++ QG
Sbjct: 951 VIATSVAEEGLDIQKCNLVIRYSYVSNEIAMVQARGR-GRRENGKYFVVAEQG 1002
>gi|58263430|ref|XP_569125.1| pre-mRNA splicing factor [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108386|ref|XP_777144.1| hypothetical protein CNBB3750 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819236|sp|P0CQ99.1|PRP5_CRYNB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|338819237|sp|P0CQ98.1|PRP5_CRYNJ RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|50259829|gb|EAL22497.1| hypothetical protein CNBB3750 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223775|gb|AAW41818.1| pre-mRNA splicing factor, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1072
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF RL EIL H ++ + + +IF + + ++F L + + + G
Sbjct: 636 KFTRLLEILGEMGEEHKDE-DDFRTLIFVDRQESADDLFREL-----LQRGYVCASLHGG 689
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ E +K F+ G+ ++ATSV GLD+ E+ LVI +DA V R GRTGR
Sbjct: 690 KEQVDRDEAIKNFKNGDVPIIVATSVAARGLDVKELKLVINYDAPNHMEDYVHRAGRTGR 749
Query: 219 KRN-GRCVILLT--QGREAHNFQTSMQTCKSYV 248
N G C+ +T Q R + + +++ K+++
Sbjct: 750 AGNKGTCITFITPEQERFSVDIVRALEASKAFI 782
>gi|148224339|ref|NP_001082033.1| nucleolar RNA helicase 2 [Xenopus laevis]
gi|10764780|gb|AAG22818.1|AF302422_1 RNA helicase II/Gu [Xenopus laevis]
Length = 800
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 118 GETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEI-MKKFRAGEF 176
G K IIF + ++ E+ L+ K G QQ+++E+ +K FR G F
Sbjct: 471 GSHGKTIIFCDSKLQAHELSTNCGSLKQSAKPL------HGDLQQKEREVVLKGFRQGTF 524
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVIL 227
LIAT+V GLDI E+DLV+ + A K V R GRTGR R G C+ L
Sbjct: 525 EVLIATNVAARGLDIPEVDLVVLYSAPKEADAYVHRSGRTGRAGRTGVCISL 576
>gi|449667537|ref|XP_002167666.2| PREDICTED: nucleolar RNA helicase 2-like [Hydra magnipapillata]
Length = 543
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 158 GVTQQEQKEI-MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
G QQ+Q+E+ ++ FR G+FN LIAT V GLDI E+DLVI + K + R GRT
Sbjct: 240 GDIQQKQRELTLQSFRNGKFNCLIATDVAARGLDIPEVDLVIQTEPPKDVDSYIHRAGRT 299
Query: 217 GRK-RNGRCVILLTQGRE 233
GR R G C+I G+E
Sbjct: 300 GRAGRKGVCIIFYKPGQE 317
>gi|197098648|ref|NP_001124599.1| probable ATP-dependent RNA helicase DHX58 [Pongo abelii]
gi|55725102|emb|CAH89418.1| hypothetical protein [Pongo abelii]
Length = 678
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 41/207 (19%)
Query: 28 DFHVTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCP---ILGKDNDLQNLLQQLK--- 81
D + H A++ L L+ FY+ V+K C +L +D +N+L L
Sbjct: 289 DALLIHDTVRAVDALA--ALQDFYHR-EHVTKTQILCAKRRLLALFDDHKNVLAHLATHG 345
Query: 82 ---PKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFD 138
PKL++ L +IL+ FR ++ + IIF R +
Sbjct: 346 PENPKLEM----------------LEKILQRQFR----SSDSPRGIIFTRTRQSAHSLLL 385
Query: 139 VLKPLEPM----VKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGL 189
L+ + ++A + +G QS+ +TQ++Q+E+++KFR G N L+ATSV EEGL
Sbjct: 386 WLQQQPGLQTVDIRAQLLIGAGNSSQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGL 445
Query: 190 DIGEIDLVICFDAQKSPIKMVQRLGRT 216
DI ++V+ + + I MVQ GR
Sbjct: 446 DIPHCNVVVRYGLLTNEISMVQARGRA 472
>gi|315608792|ref|ZP_07883768.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella buccae
ATCC 33574]
gi|315249486|gb|EFU29499.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella buccae
ATCC 33574]
Length = 579
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
Query: 118 GETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEF 176
G+ +VIIF ++ V ++ L+ + + G+ S + Q E+ +IM KF++G+
Sbjct: 243 GDLKRVIIFCGSKMKVKQVNAALQ------RKHINCGEMHSDLEQAERDDIMFKFKSGQL 296
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCVILLTQGREAH 235
+ L+AT + G+DI +I +VI +D V R+GRT R R+GR + L+++ + +
Sbjct: 297 DVLVATDIVARGIDIDDIAMVINYDVPHDAEDYVHRIGRTARADRDGRAITLVSED-DIY 355
Query: 236 NFQTSMQTCKSYVEKI 251
+FQ + + VEKI
Sbjct: 356 HFQQIEKFLEKEVEKI 371
>gi|238498592|ref|XP_002380531.1| DEAD/DEAH box RNA helicase [Aspergillus flavus NRRL3357]
gi|220693805|gb|EED50150.1| DEAD/DEAH box RNA helicase [Aspergillus flavus NRRL3357]
Length = 1201
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KFIRL E+L + + ++ E + +IF + E D L E M K + G
Sbjct: 802 KFIRLLELLGNLY--STDENEDARALIFVERQ----EGADTLL-RELMRKGYPCMSIHGG 854
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ ++ F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 855 KDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 914
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIINN 254
N G V LT+ +E A + S Q+ V+K++++
Sbjct: 915 AGNTGTAVTFLTEDQERYSVDIAKALKQSGQSVPEPVQKMVDS 957
>gi|119173770|ref|XP_001239279.1| DEAD/DEAH box RNA helicase [Coccidioides immitis RS]
gi|118597491|sp|Q1DHB2.1|PRP5_COCIM RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|392869485|gb|EJB11830.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coccidioides
immitis RS]
Length = 1197
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + + E + +IF + + + L M K + G
Sbjct: 792 KFVRLLELLGNLY--SDDNNEDARALIFVDRQEAADGLLRDL-----MRKGYPCMSIHGG 844
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ + F+AG F LIATSV GLD+ ++ LVI +DA V R GRTGR
Sbjct: 845 KDQVDRDSTIDDFKAGIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGR 904
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIINN 254
N G V LT+ +E A + S Q+ V+K++++
Sbjct: 905 AGNTGTAVTFLTEEQERYSVDIAKALKQSGQSVPEAVQKMVDS 947
>gi|283767230|gb|ADB28894.1| vasa-like protein [Macrobrachium nipponense]
Length = 601
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 22/141 (15%)
Query: 104 REILESHFR--LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVT- 160
++IL H L AE G K+++F K + + A + Q S T
Sbjct: 393 KDILYEHIGELLSAEDG--MKILVFVE-----------TKKMADFIGAFLCNNQISATTI 439
Query: 161 -----QQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
QQ+++E +K FR G+F+ L+AT+V GLDI I VI FD K + V R+GR
Sbjct: 440 HGDRHQQQREEALKTFRNGKFDVLVATAVAARGLDIPGIGCVINFDLPKEVDEYVHRIGR 499
Query: 216 TGRKRN-GRCVILLTQGREAH 235
TGR N GR + +G ++H
Sbjct: 500 TGRVGNCGRAISFFDRGVDSH 520
>gi|94501739|ref|ZP_01308253.1| probable ATP-dependent RNA helicase [Oceanobacter sp. RED65]
gi|94426139|gb|EAT11133.1| probable ATP-dependent RNA helicase [Oceanobacter sp. RED65]
Length = 449
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG-VTQQEQKEIMKKFRAGEFN 177
E + IIF N + + + L ++ VG G +TQ E+ +M + R G F
Sbjct: 244 EYRQAIIFTNTKEKTEQTYHFLS------YHNVEVGYLHGDMTQDERNHVMTQMRNGRFK 297
Query: 178 TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNF 237
L+AT V GLDI IDLVI FD +S V R+GRTGR I L E N
Sbjct: 298 VLVATDVAARGLDIQSIDLVINFDMARSGDDYVHRIGRTGRAEASGSAISLIDHTE-WNL 356
Query: 238 QTSMQTCKSYVEKIINNKSIYANLAKN--GPRMI----PAHVTPRIKCLHIVVKDRVTPA 291
+ +++ Y+ +N+K + A +A N GP+ + A + K K + A
Sbjct: 357 KAAIE---RYLRVNMNHKYVKA-IAGNYKGPKKVKGNGKAASKGKPKNKKDGKKGPQSKA 412
Query: 292 KPSKKKPKENEKANKKSKKKLETDGNS 318
+P+K K + K SK+ + DG +
Sbjct: 413 RPTKGKRDNSNKKKPTSKRTIWGDGTA 439
>gi|330997890|ref|ZP_08321724.1| DEAD/DEAH box helicase [Paraprevotella xylaniphila YIT 11841]
gi|329569494|gb|EGG51264.1| DEAD/DEAH box helicase [Paraprevotella xylaniphila YIT 11841]
Length = 483
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG-QSSGVTQQEQKEIMKKFRAGEFNTLI 180
+VI+FA+ ++ V ++ L +A VG S + QQE+ E+M KF+A + + L+
Sbjct: 246 RVIVFASSKLKVKDMAIALG------RAGFKVGAMHSDLEQQERDEVMYKFKAQQIDVLV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI FD V R+GRT R N I L ++ F
Sbjct: 300 ATDIVARGIDIDDIQLVINFDVPHDAEDYVHRIGRTARANNDGEAITLVSEKDQQRF--- 356
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIP 270
+ + ++E I +S+ L + GP P
Sbjct: 357 -ASIEHFLETEIEKRSLPEGLGE-GPAYRP 384
>gi|126326479|ref|XP_001374256.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Monodelphis domestica]
Length = 1023
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 70 DNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANY 129
D L +L + K +L M+ +Y + K +LR + F G + IIF
Sbjct: 667 DTFLLDLFYENKKELKKLAMTPDY--ENEKLTKLRNTIMEEFT--KTDGSVARGIIFTKT 722
Query: 130 RVVVAEIFDVLKPLEPM----VKASMFVGQSS-----GVTQQEQKEIMKKFRAGEFNTLI 180
R + + +E VKA +G + +TQ EQKE++ FR G+ N LI
Sbjct: 723 RQSAYSLSQWINSIEKFAEVGVKAHHLIGAGNSSEFKAMTQNEQKEVINNFRTGKINLLI 782
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
AT+V EEGLDI E ++VI + + I M+Q GR R V++ + G
Sbjct: 783 ATTVAEEGLDIKECNIVIRYSLVTNEIAMLQARGR-ARADESTYVLVASDG 832
>gi|432110823|gb|ELK34300.1| Putative ATP-dependent RNA helicase DDX58 [Myotis davidii]
Length = 883
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 18/173 (10%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L ++ + KL ++ +S + + + K L IL+ + L+ E T+ I+F
Sbjct: 536 GFDEIEQDLTRRFEEKLQELESISMDPSNENPKLKDLCFILQEEYHLNPE----TRTILF 591
Query: 127 ANYRVVVAEI---------FDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRA-GEF 176
R +V + LKP ++ Q+ G+T QK ++ FRA G+
Sbjct: 592 VKTRALVDALKKWIEENSKLSFLKP--DILTGRGKTSQNIGMTLPAQKCVLDAFRASGDK 649
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L T
Sbjct: 650 KILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTT 701
>gi|421529828|ref|ZP_15976345.1| DEAD/DEAH box helicase [Pseudomonas putida S11]
gi|402212689|gb|EJT84069.1| DEAD/DEAH box helicase [Pseudomonas putida S11]
Length = 415
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 86/186 (46%), Gaps = 12/186 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K IIF N R + I+ L + VKA + G+ Q+++K + +F+ G L+A
Sbjct: 220 KAIIFTNTRALADRIYGHLVAKD--VKAFVLHGEKD---QKDRKLALDRFKQGSSKVLVA 274
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN-GRCVILLTQGREAHNFQTS 240
T V GLDI +DLVI FD +S + V R+GRTGR G + L+T HN
Sbjct: 275 TDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLIT-----HNDWNL 329
Query: 241 MQTCKSYVEKIINNKSI-YANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPK 299
M + + Y+++ + I NGP+ + A V K +K+KP
Sbjct: 330 MSSIERYLKQQFERRVIKEVKGTYNGPKKVKASGKAAGSKKKKVEKKTGDKKAAAKRKPT 389
Query: 300 ENEKAN 305
KAN
Sbjct: 390 AKPKAN 395
>gi|336320811|ref|YP_004600779.1| DEAD/DEAH box helicase domain protein [[Cellvibrio] gilvus ATCC
13127]
gi|336104392|gb|AEI12211.1| DEAD/DEAH box helicase domain protein [[Cellvibrio] gilvus ATCC
13127]
Length = 605
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNT 178
E I+F R E+ L +E V A+ G V Q ++++I+ + R G +
Sbjct: 258 EADAAIVFVRTRGAAEELGSAL--VERGVSAAFISGD---VAQGDREKIVDRLRGGALDV 312
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLTQGREAHNF 237
L+AT V GLD+ I LV+ FD + P V R+GRTGR R G + +T E
Sbjct: 313 LVATDVAARGLDVERIGLVVNFDVPREPETYVHRIGRTGRAGREGIALTFVTPA-EQSRL 371
Query: 238 QTSMQTCKSYVEKI 251
+T +T ++ +E++
Sbjct: 372 RTIERTIRTQLEQV 385
>gi|269956525|ref|YP_003326314.1| DEAD/DEAH box helicase domain-containing protein [Xylanimonas
cellulosilytica DSM 15894]
gi|269305206|gb|ACZ30756.1| DEAD/DEAH box helicase domain protein [Xylanimonas cellulosilytica
DSM 15894]
Length = 712
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 124 IIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATS 183
I+F R E+ L +E + A+ G V Q+E+++I+++ R+G + L+AT
Sbjct: 295 IVFTRTRSAAEEVGAAL--IEKGISAATISGD---VAQKEREKIVERLRSGALDVLVATD 349
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLT 229
V GLD+ I LV+ FD + V R+GRTGR R GR V +T
Sbjct: 350 VAARGLDVDRIGLVVNFDIPREAEAYVHRIGRTGRAGRTGRAVSFVT 396
>gi|302896162|ref|XP_003046961.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
77-13-4]
gi|256727889|gb|EEU41248.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
77-13-4]
Length = 1452
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 99 KFIRLREILESHFRLHAEKGETTK-VIIFANYRVVVAEIFDVLKP----LEPMVKASMFV 153
K +L EIL LHA ++TK I+F R + D+ + + MV M
Sbjct: 365 KMKKLHEIL-----LHAFTRDSTKRCIVFVEKRHTAWLLSDLYQQQGMRIPGMVAYYMIG 419
Query: 154 GQS-----SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
QS S ++ ++Q ++KF+ G N L AT+V EEG+D+ + DLVI FD S I+
Sbjct: 420 SQSASSTHSNMSHRDQVVTLQKFKRGSINCLFATTVAEEGIDVPDCDLVIRFDLYNSVIQ 479
Query: 209 MVQRLGRTGRKRNGRCVILLTQG 231
+Q GR R+ N R + +L +G
Sbjct: 480 YLQSKGR-ARQSNSRYITMLEEG 501
>gi|303324443|ref|XP_003072209.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240111919|gb|EER30064.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 1197
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + + E + +IF + + + L M K + G
Sbjct: 792 KFVRLLELLGNLY--SDDNNEDARALIFVDRQEAADGLLRDL-----MRKGYPCMSIHGG 844
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ + F+AG F LIATSV GLD+ ++ LVI +DA V R GRTGR
Sbjct: 845 KDQVDRDSTIDDFKAGIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGR 904
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIINN 254
N G V LT+ +E A + S Q+ V+K++++
Sbjct: 905 AGNTGTAVTFLTEEQERYSVDIAKALKQSGQSVPEAVQKMVDS 947
>gi|405118430|gb|AFR93204.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Cryptococcus
neoformans var. grubii H99]
Length = 1071
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF RL EIL H ++ + + +IF + + ++F L + + + G
Sbjct: 635 KFTRLLEILGEMGEEHKDE-DDFRTLIFVDRQESADDLFREL-----LQRGYVCASLHGG 688
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ E +K F+ G+ ++ATSV GLD+ E+ LVI +DA V R GRTGR
Sbjct: 689 KEQVDRDEAIKNFKNGDVPIIVATSVAARGLDVKELKLVINYDAPNHMEDYVHRAGRTGR 748
Query: 219 KRN-GRCVILLT--QGREAHNFQTSMQTCKSYV 248
N G C+ +T Q R + + +++ K+++
Sbjct: 749 AGNKGTCITFITPEQERFSVDIVRALEASKAFI 781
>gi|159131126|gb|EDP56239.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus A1163]
Length = 1211
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL EIL + + A E + +IF + + E D L E M K + G
Sbjct: 808 KFVRLLEILGNLYSDDAN--EDARALIFVDRQ----EAADTLL-RELMRKGYPCMSIHGG 860
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ ++ F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 861 KDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 920
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIINN 254
N G V LT+ +E A + S Q V+K++++
Sbjct: 921 AGNTGTAVTFLTEEQERYSVDIAKALRQSGQKVPEPVQKMVDS 963
>gi|119478976|ref|XP_001259517.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
gi|158706438|sp|A1DE13.1|DCL1_NEOFI RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
gi|119407671|gb|EAW17620.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
Length = 1538
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRV---VVAEIFDVLKPLEPMVKASMFVGQSSG- 158
LR L HF TK I+F R ++ E+F VL P ++ + +G G
Sbjct: 457 LRMELSKHF----SDTTGTKCIVFTQKRYTAKILNELFTVLNI--PHLRPGVLIGVRPGD 510
Query: 159 -----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
VT ++Q + KFR GE N L ATSV EEGLDI + +LV+ FD ++ I+ VQ
Sbjct: 511 IGGMNVTFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYRTLIQYVQSR 570
Query: 214 GRT 216
GR
Sbjct: 571 GRA 573
>gi|90076976|dbj|BAE88168.1| unnamed protein product [Macaca fascicularis]
Length = 488
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG 154
K L +IL+ FR ++ + IIF R + L+ + ++A + +G
Sbjct: 259 KLEMLEKILQRQFR----SSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRAQLLIG 314
Query: 155 -----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
QS+ +TQ++Q+E+++KFR G N L+ATSV EEGLDI + ++V+ + + I M
Sbjct: 315 AGNSSQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISM 374
Query: 210 VQRLGRT 216
VQ GR
Sbjct: 375 VQARGRA 381
>gi|258570243|ref|XP_002543925.1| hypothetical protein UREG_03442 [Uncinocarpus reesii 1704]
gi|237904195|gb|EEP78596.1| hypothetical protein UREG_03442 [Uncinocarpus reesii 1704]
Length = 1206
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + A E + +IF + + + L M K + G
Sbjct: 803 KFVRLLELLGNLYSDDAN--EDARALIFVDRQEAADGLLRDL-----MRKGYPCMSIHGG 855
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ + F+AG F LIATSV GLD+ ++ LVI +DA V R GRTGR
Sbjct: 856 KDQVDRDSTIDDFKAGIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGR 915
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIIN 253
N G V LT+ +E A + S Q V+K+++
Sbjct: 916 AGNTGTAVTFLTEEQERYSVDIAKALKQSGQPVPDAVQKMVD 957
>gi|70995215|ref|XP_752371.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus Af293]
gi|74672743|sp|Q4WT99.1|PRP5_ASPFU RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|66850006|gb|EAL90333.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus Af293]
Length = 1211
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL EIL + + A E + +IF + + E D L E M K + G
Sbjct: 808 KFVRLLEILGNLYSDDAN--EDARALIFVDRQ----EAADTLL-RELMRKGYPCMSIHGG 860
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ ++ F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 861 KDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 920
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIINN 254
N G V LT+ +E A + S Q V+K++++
Sbjct: 921 AGNTGTAVTFLTEEQERYSVDIAKALRQSGQKVPEPVQKMVDS 963
>gi|67521618|ref|XP_658870.1| hypothetical protein AN1266.2 [Aspergillus nidulans FGSC A4]
gi|74657573|sp|Q5BDW4.1|PRP5_EMENI RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|40746703|gb|EAA65859.1| hypothetical protein AN1266.2 [Aspergillus nidulans FGSC A4]
gi|259488412|tpe|CBF87827.1| TPA: Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC
3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BDW4]
[Aspergillus nidulans FGSC A4]
Length = 1173
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + ++ E + +IF + + E D L E M K + G
Sbjct: 774 KFVRLLELLGNLY--STDENEDARSLIFVDRQ----EAADTLL-RELMRKGYPCMSIHGG 826
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ ++ F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 827 KDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 886
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIINN 254
N G V LT+ +E A + S Q V+K++++
Sbjct: 887 AGNTGTAVTFLTEDQERYSVDIAKALKQSGQEVPEAVQKLVDS 929
>gi|290993372|ref|XP_002679307.1| dicer helicase [Naegleria gruberi]
gi|284092923|gb|EFC46563.1| dicer helicase [Naegleria gruberi]
Length = 857
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLKP---LEPMVKASMFVGQSSGVTQQEQKEIMKK 170
+ E G+ + +IF R+ E + L+ L+ +K + +G+S G+T +Q I+
Sbjct: 423 YKETGKELRALIFVKTRIGCKETLEFLQSEPDLKDYLKVDILLGKS-GMTSNQQNTILDN 481
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
FR G NTLI+TSV EEGLD+ LVI D ++ M+Q GR
Sbjct: 482 FRQGIVNTLISTSVAEEGLDVPACSLVIRLDGIETTKTMIQSRGR 526
>gi|158706443|sp|Q0CEI2.2|DCL2_ASPTN RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1377
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 24/229 (10%)
Query: 16 HINRDLDRMIQRDFHVTHSLAS-ALENLVTYGLRSFYNNLVEVSKEDGSCPILGKDNDLQ 74
+ N L R ++R H+ L A++ + +R K D S +L DN+ +
Sbjct: 285 YCNESLRRFVERSCHIFQELGGWAVDYFIHASIRRLR------EKIDDSALMLDWDNEEK 338
Query: 75 NLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVA 134
L +I + S+ FI ++ L + T +IFA R V
Sbjct: 339 EYLASFLS--NIATIQSDPPRRPEDFIPSPKLEALISFLSSTDDSTFSGLIFAKQRATVT 396
Query: 135 EIFDVLKPLEPMVK----ASMFVGQSSG----------VTQQEQKEIMKKFRAGEFNTLI 180
+ L + P+ K + FVG S G ++ Q Q++ + +FR+G+ N ++
Sbjct: 397 -VLATLLSVHPLTKDRFRCAAFVGWSGGGNRKDLIGELLSMQMQRDTLSEFRSGQKNLIV 455
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
AT V EEG+DI +VIC+D + VQR GR RK + ++ T
Sbjct: 456 ATDVLEEGIDISACSVVICYDKPANVKSFVQRRGRARRKESTFAILFST 504
>gi|80477520|gb|AAI08449.1| LOC398188 protein [Xenopus laevis]
Length = 768
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 118 GETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEI-MKKFRAGEF 176
G K IIF + ++ E+ L+ K G QQ+++E+ +K FR G F
Sbjct: 439 GSHGKTIIFCDSKLQAHELSTNCGSLKQSAKPL------HGDLQQKEREVVLKGFRQGTF 492
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVIL 227
LIAT+V GLDI E+DLV+ + A K V R GRTGR R G C+ L
Sbjct: 493 EVLIATNVAARGLDIPEVDLVVLYSAPKEADAYVHRSGRTGRAGRTGVCISL 544
>gi|431902875|gb|ELK09090.1| Putative ATP-dependent RNA helicase DDX58 [Pteropus alecto]
Length = 929
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 22/173 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L ++ + KL ++ +S + + + K L +L+ + L+ E T+ I+F
Sbjct: 582 GFDETEQDLTRRFEEKLQELESISMDPSNENPKLKDLCFVLQEEYHLNPE----TRTILF 637
Query: 127 ANYRVVVAEIFDVLK------PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFR-AG 174
R +V D LK P +K + G Q+ G+T QK+++ F+ +G
Sbjct: 638 VKTRALV----DALKKWIEENPKLSFLKPGILTGRGRTKQNIGMTLPAQKDVLHTFKTSG 693
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
+ LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L
Sbjct: 694 DNKILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLL 745
>gi|119495979|ref|XP_001264763.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|143359979|sp|A1D373.1|PRP5_NEOFI RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|119412925|gb|EAW22866.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 1193
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL EIL + + A E + +IF + + E D L E M K + G
Sbjct: 790 KFVRLLEILGNLYSDDAN--EDARALIFVDRQ----EAADTLL-RELMRKGYPCMSIHGG 842
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ ++ F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 843 KDQIDRDSTIEDFKAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 902
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIINN 254
N G V LT+ +E A + S Q V+K++++
Sbjct: 903 AGNTGTAVTFLTEEQERYSVDIAKALRQSGQKVPEPVQKMVDS 945
>gi|90085300|dbj|BAE91391.1| unnamed protein product [Macaca fascicularis]
Length = 406
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 13/123 (10%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG---- 154
L +IL+ FR ++ + IIF R + L+ + ++A + +G
Sbjct: 2 LEKILQRQFR----SSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRAQLLIGAGNS 57
Query: 155 -QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
QS+ +TQ++Q+E+++KFR G N L+ATSV EEGLDI + ++V+ + + I MVQ
Sbjct: 58 SQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQAR 117
Query: 214 GRT 216
GR
Sbjct: 118 GRA 120
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%)
Query: 155 QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLG 214
QS+ +TQ++Q+E+++KFR G N L+ATSV EEGLDI + ++V+ + + I MVQ G
Sbjct: 191 QSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARG 250
Query: 215 RT 216
R
Sbjct: 251 RA 252
>gi|427382508|ref|ZP_18879228.1| hypothetical protein HMPREF9447_00261 [Bacteroides oleiciplenus YIT
12058]
gi|425729753|gb|EKU92604.1| hypothetical protein HMPREF9447_00261 [Bacteroides oleiciplenus YIT
12058]
Length = 435
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK ++ + VG+ S + Q +++E+M +F+AG N L+
Sbjct: 246 RVIIFASSKLKVKEVTKALKLMK------LNVGEMHSDLEQAQREEVMHEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
AT + G+DI +I LV+ +D V R+GRT R N + +E NF+
Sbjct: 300 ATDIVARGIDIDDIRLVLNYDVPHDSEDYVHRIGRTARANNDGVALTFINEKEQSNFK 357
>gi|444714076|gb|ELW54964.1| putative ATP-dependent RNA helicase DHX58 [Tupaia chinensis]
Length = 680
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 8/101 (7%)
Query: 124 IIFANYRVVVAEIFDVLK---PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRAGE 175
IIF R+ + L+ L+ V+A + G Q++ +TQ++Q+E+++KFR G
Sbjct: 374 IIFTRTRLSTHSLLLWLQEQPSLQAAVRAQVLTGAGSSSQNTHMTQRDQQEVIRKFRVGT 433
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
N L+ATSV EEGLDI + ++V+ + + I MVQ GR
Sbjct: 434 LNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRA 474
>gi|431796970|ref|YP_007223874.1| DNA/RNA helicase [Echinicola vietnamensis DSM 17526]
gi|430787735|gb|AGA77864.1| DNA/RNA helicase, superfamily II [Echinicola vietnamensis DSM
17526]
Length = 438
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 107 LESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE 166
LE L G I+FAN+R I + L + V S+F G G+ Q E++
Sbjct: 216 LEGLLMLIRSLGSDQNAIVFANHRDACDRIGEFLD--QHGVIFSLFRG---GLEQDERES 270
Query: 167 IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCV 225
+ KFR G LIAT + G+DI E+D V+ F + R GRT R K +G C+
Sbjct: 271 QLTKFRNGSTQVLIATDIAARGIDIPELDYVVHFQLPPQETTYLHRNGRTARMKASGTCI 330
Query: 226 ILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRI 277
+++T+G Y+ ++ +LA + PA VT I
Sbjct: 331 LMMTEG--------------DYLPHFLDEVPTEFSLAPQSQPITPAFVTLHI 368
>gi|395519645|ref|XP_003763953.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Sarcophilus harrisii]
Length = 1027
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 73 LQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYR-- 130
L NL + K KL ++ ++ + K +LR + F G + IIF R
Sbjct: 676 LLNLFYKNKEKLKTLALTPDH--ENEKLTKLRNTILEEFT--KTDGSVARGIIFTKTRQS 731
Query: 131 --VVVAEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATS 183
+ I D+ K E VKA +G + +TQ EQKE++ FR G+ N LIAT+
Sbjct: 732 AFALSQWIKDIEKFAEVGVKAHHLIGAGNCSEFKPMTQNEQKEVINNFRTGKINLLIATT 791
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
V EEGLDI E ++VI + + I M+Q GR
Sbjct: 792 VAEEGLDIKECNIVIRYGLVTNEIAMLQARGRA 824
>gi|149408137|ref|NP_001092258.1| probable ATP-dependent RNA helicase DHX58 [Rattus norvegicus]
Length = 678
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 14/115 (12%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPM-----VKASMFVG-----QSSGVTQQEQKEIMKK 170
T+ IIF R + + L+ +P +K M +G QS+ +TQ++Q+E++++
Sbjct: 368 TRGIIFTRTRQTASSLLLWLRQ-QPCLQTVNIKPQMLIGAGNTGQSTHMTQKDQQEVIQE 426
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV 225
FR G+ N L+ATSV EEGLDI + ++V+ + + I MVQ GR R G+ V
Sbjct: 427 FRDGKLNLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQ---ARGRARAGQSV 478
>gi|449491219|ref|XP_004174726.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX58 [Taeniopygia guttata]
Length = 674
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 83 KLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKP 142
+ ++ ++ ++ + + + +L IL HF + T++ I+F R + L+
Sbjct: 332 RANLQALAGDHRYENPRLAKLEGILREHF----QPLGTSRGIVFTKTRQSAYSLLSWLQT 387
Query: 143 LEPM----VKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGE 193
+ ++A++ G Q+ +TQ EQ++++K+FR G N L +TSV EEGLDI E
Sbjct: 388 TATLRGQHIRAAVLTGAGYSNQTRHMTQNEQQDVIKQFRQGALNLLFSTSVAEEGLDIPE 447
Query: 194 IDLVICFDAQKSPIKMVQRLGRT 216
++V+ + + I M+Q GR
Sbjct: 448 CNIVVRYGLMTNEIAMMQARGRA 470
>gi|76609700|ref|XP_615590.2| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Bos taurus]
gi|297471684|ref|XP_002685384.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Bos taurus]
gi|296490601|tpg|DAA32714.1| TPA: interferon induced with helicase C domain 1-like [Bos taurus]
Length = 1021
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K I+LR I+E + R + + IIF R + I + K E VKA +
Sbjct: 695 KLIKLRNTIMEQYSRTEG----SARGIIFTKTRQSAYALSQWIIENEKFSEVGVKAHHLI 750
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 751 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 810
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 811 MVQARGRA 818
>gi|431803785|ref|YP_007230688.1| DEAD/DEAH box helicase [Pseudomonas putida HB3267]
gi|430794550|gb|AGA74745.1| DEAD/DEAH box helicase [Pseudomonas putida HB3267]
Length = 440
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 86/186 (46%), Gaps = 12/186 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K IIF N R + I+ L + VKA + G+ Q+++K + +F+ G L+A
Sbjct: 245 KAIIFTNTRALADRIYGHLVAKD--VKAFVLHGEKD---QKDRKLALDRFKQGSSKVLVA 299
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN-GRCVILLTQGREAHNFQTS 240
T V GLDI +DLVI FD +S + V R+GRTGR G + L+T HN
Sbjct: 300 TDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLIT-----HNDWNL 354
Query: 241 MQTCKSYVEKIINNKSI-YANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPK 299
M + + Y+++ + I NGP+ + A V K +K+KP
Sbjct: 355 MSSIERYLKQQFERRVIKEVKGTYNGPKKVKASGKAAGSKKKKVEKKTGDKKAAAKRKPT 414
Query: 300 ENEKAN 305
KAN
Sbjct: 415 AKPKAN 420
>gi|339488772|ref|YP_004703300.1| DEAD/DEAH box helicase [Pseudomonas putida S16]
gi|338839615|gb|AEJ14420.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida S16]
Length = 440
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 86/186 (46%), Gaps = 12/186 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K IIF N R + I+ L + VKA + G+ Q+++K + +F+ G L+A
Sbjct: 245 KAIIFTNTRALADRIYGHLVAKD--VKAFVLHGEKD---QKDRKLALDRFKQGSSKVLVA 299
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN-GRCVILLTQGREAHNFQTS 240
T V GLDI +DLVI FD +S + V R+GRTGR G + L+T HN
Sbjct: 300 TDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLIT-----HNDWNL 354
Query: 241 MQTCKSYVEKIINNKSI-YANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPK 299
M + + Y+++ + I NGP+ + A V K +K+KP
Sbjct: 355 MSSIERYLKQQFERRVIKEVKGTYNGPKKVKASGKAAGSKKKKVEKKTGDKKAAAKRKPT 414
Query: 300 ENEKAN 305
KAN
Sbjct: 415 AKPKAN 420
>gi|422011059|ref|ZP_16357928.1| DEAD/DEAH box helicase [Actinomyces georgiae F0490]
gi|394766753|gb|EJF47752.1| DEAD/DEAH box helicase [Actinomyces georgiae F0490]
Length = 773
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFR 172
+ A + + I+F RV V E+ LE + G S V Q E++ ++++ +
Sbjct: 322 IAAGQEDADAAIVFVRTRVDVEEV-----SLELSGRGFRAAGISGDVAQTERERMVERLK 376
Query: 173 AGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLT 229
+G + L+AT V GLD+ I LV+ FD + P V R+GRTGR R GR + T
Sbjct: 377 SGSLDVLVATDVAARGLDVERISLVVNFDVPREPEAYVHRIGRTGRAGRQGRSLTFFT 434
>gi|344313227|gb|AEN04473.1| melanoma differentiation-associated protein 5 [Carassius auratus]
Length = 984
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 60 EDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE 119
++G+ I + L L + K KL + EY ++L +L+ I+ F E
Sbjct: 615 DEGTITITDTERFLFTLFKDKKAKLQELMGKPEYENNNLA--QLKTIILKEFSTR----E 668
Query: 120 TTKVIIFANYRVVVAEIFDVL----KPLEPMVKASMFVGQSSG-----VTQQEQKEIMKK 170
+ IIF R+ + + K E V AS +G +T EQK+++++
Sbjct: 669 VARGIIFTRTRLSAIALCQWIQENPKFEEVGVSASYLIGGGDQSVVKPMTAAEQKDVLQR 728
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
FR GE N LIAT+V EEGLDI E ++VI + + + M+Q GR GR +G ++
Sbjct: 729 FRKGEINLLIATTVAEEGLDIAECNVVIRYCLVTNEVAMIQARGR-GRAEDGSYTLVAEA 787
Query: 231 G 231
G
Sbjct: 788 G 788
>gi|319902155|ref|YP_004161883.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
gi|319417186|gb|ADV44297.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
Length = 415
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 7/118 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK ++ + VG+ +Q Q+E +M +F+AG N L+
Sbjct: 246 RVIIFASSKLKVKEVTKALKQMK------LNVGEMHSDLEQAQREDVMYEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
AT + G+DI +I LVI +D V R+GRT R N + +E NF+
Sbjct: 300 ATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVALTFISEKEQTNFK 357
>gi|74004732|ref|XP_545493.2| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Canis lupus familiaris]
Length = 1029
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVG 154
K I+LR + F E + IIF R + I + K E VKA +G
Sbjct: 703 KLIKLRNTIMEQF---TRTEEPARGIIFTKTRQSAFALSQWITENKKFAEVGVKAHHLIG 759
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I M
Sbjct: 760 AGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAM 819
Query: 210 VQRLGRT 216
VQ GR
Sbjct: 820 VQARGRA 826
>gi|429848709|gb|ELA24159.1| RNase3 domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 1561
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 30/186 (16%)
Query: 69 KDNDLQNLLQQLKPKLDINIMSSEYAWSHL--KFIRLREILESHFRLHAEKGETTKVIIF 126
KD+D +L P LD HL K +RL E L++ F K K I+F
Sbjct: 444 KDHDFSEVL----PTLD-----------HLSTKVLRLWEELQARF----SKPTDHKCIVF 484
Query: 127 ANYRVVVAEIFDVLKPLE---PMVKASMFVGQ-----SSGVTQQEQKEIMKKFRAGEFNT 178
+ R+ + D+ + P + A +G ++ ++ +EQ + KFR G+ N
Sbjct: 485 VDMRLTALLLTDLFRQEATKLPFLNAEFLIGSRPDSGAANMSFKEQVLTISKFRHGKVNC 544
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
L AT V EEG+DI + +VI FD +S I+ +Q GR R+ + + G H
Sbjct: 545 LFATQVAEEGIDIPDCSIVIRFDLYRSAIQYIQSKGR-ARRAESEYLTFIEGGNGRHTRT 603
Query: 239 TSMQTC 244
+ C
Sbjct: 604 VAQAQC 609
>gi|147899364|ref|NP_001082035.1| RNA helicase II/Gu [Xenopus laevis]
gi|16975508|gb|AAG22819.2|AF302423_1 RNA helicase II/Gu [Xenopus laevis]
Length = 759
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 158 GVTQQEQKEI-MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
G QQ+++E+ +K FR G F LIAT+V GLDI E+DLV+ + A K V R GRT
Sbjct: 463 GDLQQKEREVVLKGFRQGTFEVLIATNVAARGLDIPEVDLVVLYSAPKEADAYVHRSGRT 522
Query: 217 GRK-RNGRCVIL 227
GR R G C+ L
Sbjct: 523 GRAGRTGVCISL 534
>gi|75050051|sp|Q9GLV6.1|DDX58_PIG RecName: Full=Probable ATP-dependent RNA helicase DDX58; AltName:
Full=DEAD box protein 58; AltName: Full=RHIV-1; AltName:
Full=RIG-I-like receptor 1; Short=RLR-1; AltName:
Full=RNA helicase induced by virus; AltName:
Full=Retinoic acid-inducible gene 1 protein;
Short=RIG-1; AltName: Full=Retinoic acid-inducible gene
I protein; Short=RIG-I
gi|9957597|gb|AAG09428.1|AF181119_1 RNA helicase [Sus scrofa]
Length = 940
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 14/169 (8%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T+ I+F
Sbjct: 581 GFDEIEQDLTQRFEEKLQELESISIDPSNENPKLRDLCFILQEEYHLNPE----TRTILF 636
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFN-T 178
R +V + +K P +K S+ G Q+ G+T QK ++ FR + N
Sbjct: 637 VKTRALVDALKKWIKENPKLSFLKPSILTGRGKTNQNIGMTLPAQKCVLDTFRTDKDNKI 696
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
LI TSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L
Sbjct: 697 LITTSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLL 744
>gi|320093766|ref|ZP_08025614.1| ATP-dependent RNA helicase, partial [Actinomyces sp. oral taxon 178
str. F0338]
gi|319979303|gb|EFW10798.1| ATP-dependent RNA helicase [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 800
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNT 178
+ I+F RV V E+ LE + G S V Q E++ ++++ ++G +
Sbjct: 297 DADAAIVFVRTRVDVEEV-----SLELSGRGFRAAGISGDVAQTERERMVERLKSGSLDV 351
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLT 229
L+AT V GLD+ I LV+ FD + P V R+GRTGR R GR + T
Sbjct: 352 LVATDVAARGLDVERISLVVNFDVPREPEAYVHRIGRTGRAGRQGRSLTFFT 403
>gi|386010970|ref|YP_005929247.1| DEAD/DEAH box helicase [Pseudomonas putida BIRD-1]
gi|313497676|gb|ADR59042.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida BIRD-1]
Length = 440
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K IIF N R + I+ L + VKA + G+ Q+++K +++F+ G L+A
Sbjct: 245 KAIIFTNTRAMADRIYGHLVAKD--VKAFVLHGEKD---QKDRKLAIERFKQGSSKVLVA 299
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN-GRCVILLTQGREAHNFQTS 240
T V GLDI +DLVI FD +S + V R+GRTGR G + L+T HN
Sbjct: 300 TDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLIT-----HNDWNL 354
Query: 241 MQTCKSYVEKIINNKSI-YANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPK 299
M + + Y+++ + I NGP+ + A V K +K+KP
Sbjct: 355 MSSIERYLKQQFERRVIKEVKGTYNGPKKVKASGKAAGSKKKKVEKKTGDKKAAAKRKPT 414
Query: 300 ENEKAN 305
KAN
Sbjct: 415 AKPKAN 420
>gi|261880679|ref|ZP_06007106.1| ATP-dependent RNA helicase DeaD [Prevotella bergensis DSM 17361]
gi|270332631|gb|EFA43417.1| ATP-dependent RNA helicase DeaD [Prevotella bergensis DSM 17361]
Length = 560
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 105 EILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQ 164
EI++ F+ G+ +VIIF+ + V +I L L+ + M S + Q ++
Sbjct: 234 EIIKHIFKA----GDLKRVIIFSGSKQKVKQINQALAQLK-INSGEMH----SDLDQSQR 284
Query: 165 KEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRC 224
+IM KF++G+ + L+AT + G+DI +I +VI +D + V R+GRT R
Sbjct: 285 DDIMYKFKSGQIDVLVATDIVARGIDIDDIAMVINYDVPRDSEDYVHRIGRTARADRDGV 344
Query: 225 VILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVV 284
I L + F +E+ + +K I N G + P + T R
Sbjct: 345 AITLVNEDDMFAFHK--------IEQFL-DKEIEKNPLPEGMKEGPDYDTSR-------- 387
Query: 285 KDRVTPAKPSKKKPKENEKANKKSKK 310
K R TPAK ++ +E E A+KK+K+
Sbjct: 388 KPRRTPAKKRRRNDRE-ETAHKKTKQ 412
>gi|301773535|ref|XP_002922173.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like
[Ailuropoda melanoleuca]
gi|281344530|gb|EFB20114.1| hypothetical protein PANDA_011148 [Ailuropoda melanoleuca]
Length = 684
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 105 EILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG-----Q 155
E+LE R ++ + IIF R + L+ + ++A + +G Q
Sbjct: 352 EMLEQILREQFGSSDSPRGIIFTQTRQSTHSLLLWLQQQPGLQTVDIRADLLIGAGTSSQ 411
Query: 156 SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
++ +TQ++Q+E+++KFR G N L+ATSV EEGLDI + ++V+ + + I MVQ GR
Sbjct: 412 NTHMTQRDQQEVIRKFRVGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGR 471
Query: 216 T 216
Sbjct: 472 A 472
>gi|225374820|ref|ZP_03752041.1| hypothetical protein ROSEINA2194_00440 [Roseburia inulinivorans DSM
16841]
gi|225213389|gb|EEG95743.1| hypothetical protein ROSEINA2194_00440 [Roseburia inulinivorans DSM
16841]
Length = 531
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 124 IIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATS 183
++F N + +V E+ + LK + M G + Q ++ +MK FR+G LIAT
Sbjct: 248 LVFCNTKKMVDELSEELKS-----RGYMAEGLHGDMKQAQRDRVMKAFRSGRVEILIATD 302
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLTQGREAHNFQTSMQ 242
V G+D+ +++ V +D + V R+GRTGR R GR + +G+E + + M+
Sbjct: 303 VAARGIDVDDVEAVFNYDIPQDDEYYVHRIGRTGRAGRTGRAFTFV-KGKEVYKLKDIMR 361
Query: 243 TCKS 246
CK+
Sbjct: 362 YCKT 365
>gi|62988819|gb|AAY24206.1| unknown [Homo sapiens]
Length = 589
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 264 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 319
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 320 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 379
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 380 MVQARGRA 387
>gi|393909534|gb|EFO22079.2| hypothetical protein LOAG_06406 [Loa loa]
Length = 989
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
G++ G + +Q++I+ +F +G+ L ATSV EEG+DI + +LVI +D + I VQR
Sbjct: 702 GENGGQSINQQRDILARFTSGDIKILCATSVAEEGIDIQKCNLVIKYDYVTNEIAHVQRR 761
Query: 214 GRTGRKRNGRCVILLT----QGREAHN 236
GR GR N RC++L Q RE N
Sbjct: 762 GR-GRAANSRCLLLTCDPKLQTREEKN 787
>gi|297668722|ref|XP_002812573.1| PREDICTED: LOW QUALITY PROTEIN: interferon-induced helicase C
domain-containing protein 1 [Pongo abelii]
Length = 1025
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 700 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 755
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 756 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 815
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 816 MVQARGRA 823
>gi|148546618|ref|YP_001266720.1| DEAD/DEAH box helicase [Pseudomonas putida F1]
gi|395447873|ref|YP_006388126.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida ND6]
gi|148510676|gb|ABQ77536.1| DEAD/DEAH box helicase domain protein [Pseudomonas putida F1]
gi|388561870|gb|AFK71011.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida ND6]
Length = 453
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K IIF N R + I+ L + VKA + G+ Q+++K +++F+ G L+A
Sbjct: 258 KAIIFTNTRAMADRIYGHLVAKD--VKAFVLHGEKD---QKDRKLAIERFKQGSSKVLVA 312
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN-GRCVILLTQGREAHNFQTS 240
T V GLDI +DLVI FD +S + V R+GRTGR G + L+T HN
Sbjct: 313 TDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLIT-----HNDWNL 367
Query: 241 MQTCKSYVEKIINNKSI-YANLAKNGPRMI 269
M + + Y+++ + I NGP+ +
Sbjct: 368 MSSIERYLKQQFERRVIKEVKGTYNGPKKV 397
>gi|356565129|ref|XP_003550797.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQS 156
K +RL IL S+FRL + K IIF N V + +L+ L+ + ++ VG
Sbjct: 394 KLLRLIGIL-SNFRLQ----KNMKCIIFVNRIVTARSLSYILQKLKLLRQWRSDFLVGVH 448
Query: 157 SGVTQQEQKE---IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
+G+ +K I+ KFR+GE N L+AT VGEEGLDI LVI FD ++ +Q
Sbjct: 449 AGLKSMSRKTMNIIVDKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 508
Query: 214 GRT 216
GR
Sbjct: 509 GRA 511
>gi|270296763|ref|ZP_06202962.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270272750|gb|EFA18613.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 429
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK ++ + VG+ S + Q +++E+M +F+AG N L+
Sbjct: 246 RVIIFASSKLKVKEVTKALKQMK------LNVGEMHSDLEQAQREEVMYEFKAGRINILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
AT + G+DI +I LVI +D V R+GRT R N I +E +F+
Sbjct: 300 ATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVAITFVSEKEQGSFK 357
>gi|157272171|gb|ABV26717.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide [Sus scrofa]
Length = 943
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 14/169 (8%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T+ I+F
Sbjct: 582 GFDEIEQDLTQRFEEKLQELESISIDPSNENPKLRDLCFILQEEYHLNPE----TRTILF 637
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFN-T 178
R +V + +K P +K S+ G Q+ G+T QK ++ FR + N
Sbjct: 638 VKTRALVDALKKWIKENPKLSFLKPSILTGRGKTNQNIGMTLPAQKCVLDTFRTDKDNKI 697
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
LI TSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L
Sbjct: 698 LITTSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLL 745
>gi|26991217|ref|NP_746642.1| DEAD/DEAH box helicase [Pseudomonas putida KT2440]
gi|397696842|ref|YP_006534725.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida DOT-T1E]
gi|421524014|ref|ZP_15970641.1| DEAD/DEAH box helicase [Pseudomonas putida LS46]
gi|24986267|gb|AAN70106.1|AE016650_5 ATP-dependent RNA helicase, DEAD box family [Pseudomonas putida
KT2440]
gi|397333572|gb|AFO49931.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida DOT-T1E]
gi|402752259|gb|EJX12766.1| DEAD/DEAH box helicase [Pseudomonas putida LS46]
Length = 440
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K IIF N R + I+ L + VKA + G+ Q+++K +++F+ G L+A
Sbjct: 245 KAIIFTNTRAMADRIYGHLVAKD--VKAFVLHGEKD---QKDRKLAIERFKQGSSKVLVA 299
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN-GRCVILLTQGREAHNFQTS 240
T V GLDI +DLVI FD +S + V R+GRTGR G + L+T HN
Sbjct: 300 TDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLIT-----HNDWNL 354
Query: 241 MQTCKSYVEKIINNKSI-YANLAKNGPRMI 269
M + + Y+++ + I NGP+ +
Sbjct: 355 MSSIERYLKQQFERRVIKEVKGTYNGPKKV 384
>gi|396583986|ref|ZP_10484488.1| DEAD/DEAH box helicase [Actinomyces sp. ICM47]
gi|395548411|gb|EJG15674.1| DEAD/DEAH box helicase [Actinomyces sp. ICM47]
Length = 734
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 114 HAEKG--ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKF 171
H KG E I+F R V E+ LE + G S V Q E++ ++++
Sbjct: 292 HIAKGQEEADAAIVFVRTRADVEEV-----SLELSGRGFRAAGISGDVAQTERERMVERL 346
Query: 172 RAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLT 229
+ G + L+AT V GLD+ I LV+ FD + P V R+GRTGR R GR + T
Sbjct: 347 KNGSLDVLVATDVAARGLDVERISLVVNFDVPREPEAYVHRIGRTGRAGREGRALTFFT 405
>gi|356546104|ref|XP_003541471.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQS 156
K +RL IL S+FRL + K IIF N V + +L+ L+ + ++ VG
Sbjct: 393 KLLRLIGIL-SNFRLQ----KNMKCIIFVNRIVTARSLSYILQKLKLLRQWRSDFLVGVH 447
Query: 157 SGVTQQEQKE---IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
+G+ +K I+ KFR+GE N L+AT VGEEGLDI LVI FD ++ +Q
Sbjct: 448 AGLKSMSRKTMNIIVDKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 507
Query: 214 GRT 216
GR
Sbjct: 508 GRA 510
>gi|356460981|ref|NP_998969.2| probable ATP-dependent RNA helicase DDX58 [Sus scrofa]
gi|224176124|dbj|BAH23574.1| DEAD box polypeptide 58 [Sus scrofa]
Length = 943
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 14/169 (8%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T+ I+F
Sbjct: 582 GFDEIEQDLTQRFEEKLQELESISIDPSNENPKLRDLCFILQEEYHLNPE----TRTILF 637
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFN-T 178
R +V + +K P +K S+ G Q+ G+T QK ++ FR + N
Sbjct: 638 VKTRALVDALKKWIKENPKLSFLKPSILTGRGKTNQNIGMTLPAQKCVLDTFRTDKDNKI 697
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
LI TSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L
Sbjct: 698 LITTSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLL 745
>gi|355564928|gb|EHH21417.1| hypothetical protein EGK_04479 [Macaca mulatta]
Length = 1025
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 700 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 755
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 756 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 815
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 816 MVQARGRA 823
>gi|320037247|gb|EFW19185.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coccidioides
posadasii str. Silveira]
Length = 853
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + + E + +IF + + + L M K + G
Sbjct: 448 KFVRLLELLGNLY--SDDNNEDARALIFVDRQEAADGLLRDL-----MRKGYPCMSIHGG 500
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ + F+AG F LIATSV GLD+ ++ LVI +DA V R GRTGR
Sbjct: 501 KDQVDRDSTIDDFKAGIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGR 560
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIINN 254
N G V LT+ +E A + S Q+ V+K++++
Sbjct: 561 AGNTGTAVTFLTEEQERYSVDIAKALKQSGQSVPEAVQKMVDS 603
>gi|256832539|ref|YP_003161266.1| DEAD/DEAH box helicase [Jonesia denitrificans DSM 20603]
gi|256686070|gb|ACV08963.1| DEAD/DEAH box helicase domain protein [Jonesia denitrificans DSM
20603]
Length = 657
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 86 INIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEP 145
+ + EYA + R S +R+ A + I+F R E+ L +E
Sbjct: 260 VTAIDQEYA-----VVPFRHKTGSLYRVLATS-DVEAAIVFCRTRGAAEEVGAAL--IER 311
Query: 146 MVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKS 205
V A+ G V Q+++++I+++ R G+ + L+AT V GLD+ I LV+ FD
Sbjct: 312 GVSAATISGD---VPQKDREKIVERLRNGQLDVLVATDVAARGLDVDRIGLVVNFDIPGE 368
Query: 206 PIKMVQRLGRTGRK-RNGRCVILLT 229
P V R+GRTGR R GR + +T
Sbjct: 369 PEAYVHRIGRTGRAGRQGRALSFIT 393
>gi|46581710|ref|YP_012518.1| DEAD/DEAH box helicase [Desulfovibrio vulgaris str. Hildenborough]
gi|387154902|ref|YP_005703838.1| DEAD/DEAH box helicase [Desulfovibrio vulgaris RCH1]
gi|46451133|gb|AAS97778.1| ATP-dependent RNA helicase, DEAD/DEAH family [Desulfovibrio
vulgaris str. Hildenborough]
gi|311235346|gb|ADP88200.1| DEAD/DEAH box helicase domain protein [Desulfovibrio vulgaris RCH1]
Length = 532
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 13/182 (7%)
Query: 86 INIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEP 145
+ + ++E AW ++ R + + F + + K I+F + V E+ L+
Sbjct: 214 LTVANTEQAWFEVRPFRRVDAVCRIFDAYIPR----KAIVFRATKQGVDELAAALQ---- 265
Query: 146 MVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
+ + G Q Q+E +M +FRAG + L+AT V GLD+ ++D VI FD
Sbjct: 266 --QRGILADALHGDLNQTQRERVMSRFRAGGISVLVATDVAARGLDVDDVDTVINFDLPN 323
Query: 205 SPIKMVQRLGRTGRK-RNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAK 263
P V R+GRTGR R GR GR+ + + + S +++ + A+ A+
Sbjct: 324 DPETYVHRIGRTGRAGRTGRA-FSFAAGRDVYKLRDIQRVTGSRIDRRAMPTAADASRAR 382
Query: 264 NG 265
G
Sbjct: 383 TG 384
>gi|239613405|gb|EEQ90392.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis ER-3]
Length = 1197
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 99 KFIRLREILESHFRLHAE-KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS 157
KF+RL +L L+A+ K E + +IF + + + L M K +
Sbjct: 797 KFVRLLALLGD---LYADDKNEDARALIFVDRQEAADGLLRDL-----MHKGYPCMSIHG 848
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
G Q ++ + F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTG
Sbjct: 849 GKDQVDRDSTIDDFKAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTG 908
Query: 218 RKRN-GRCVILLTQGREAHN------FQTSMQTCKSYVEKIINN 254
R N G V LT+ +E ++ + S Q V+K++N+
Sbjct: 909 RAGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPVQKLVNS 952
>gi|49119283|gb|AAH73332.1| LOC398189 protein [Xenopus laevis]
Length = 727
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 158 GVTQQEQKEI-MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
G QQ+++E+ +K FR G F LIAT+V GLDI E+DLV+ + A K V R GRT
Sbjct: 431 GDLQQKEREVVLKGFRQGTFEVLIATNVAARGLDIPEVDLVVLYSAPKEADAYVHRSGRT 490
Query: 217 GRK-RNGRCVIL 227
GR R G C+ L
Sbjct: 491 GRAGRTGVCISL 502
>gi|355695573|gb|AES00054.1| interferon induced with helicase C domain 1 [Mustela putorius furo]
Length = 1020
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 695 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENKKFAEVGVKAHHLI 750
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 751 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 810
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 811 MVQARGRA 818
>gi|297812215|ref|XP_002873991.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319828|gb|EFH50250.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1693
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 13/141 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFD-VLKPLEPM--VKASMFVGQ 155
K ++L EIL S FRL K IIF N R+V A +L LE + K+ VG
Sbjct: 465 KLVQLIEIL-SVFRLEPH----MKCIIFVN-RIVTARTLSCILNNLELLRSWKSDFLVGL 518
Query: 156 SSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
SSG+ +++ + I+K+F++ E N L+AT VGEEGLDI LVI +D ++ +Q
Sbjct: 519 SSGLKSMSRRGMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQS 578
Query: 213 LGRTGRKRNGRCVILLTQGRE 233
GR R L+ G E
Sbjct: 579 RGR-ARMPQSEYAFLVDSGNE 598
>gi|261194749|ref|XP_002623779.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis SLH14081]
gi|239588317|gb|EEQ70960.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis SLH14081]
Length = 1197
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 99 KFIRLREILESHFRLHAE-KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS 157
KF+RL +L L+A+ K E + +IF + + + L M K +
Sbjct: 797 KFVRLLALLGD---LYADDKNEDARALIFVDRQEAADGLLRDL-----MHKGYPCMSIHG 848
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
G Q ++ + F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTG
Sbjct: 849 GKDQVDRDSTIDDFKAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTG 908
Query: 218 RKRN-GRCVILLTQGREAHN------FQTSMQTCKSYVEKIINN 254
R N G V LT+ +E ++ + S Q V+K++N+
Sbjct: 909 RAGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPVQKLVNS 952
>gi|114052719|ref|NP_001040588.1| interferon-induced helicase C domain-containing protein 1 [Macaca
mulatta]
gi|113201795|gb|ABI33114.1| melanoma differentiation associated protein-5 [Macaca mulatta]
gi|355750574|gb|EHH54901.1| hypothetical protein EGM_04004 [Macaca fascicularis]
gi|383412295|gb|AFH29361.1| interferon-induced helicase C domain-containing protein 1 [Macaca
mulatta]
gi|387540852|gb|AFJ71053.1| interferon-induced helicase C domain-containing protein 1 [Macaca
mulatta]
Length = 1025
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 700 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 755
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 756 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 815
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 816 MVQARGRA 823
>gi|449543396|gb|EMD34372.1| hypothetical protein CERSUDRAFT_55073 [Ceriporiopsis subvermispora
B]
Length = 1702
Score = 66.2 bits (160), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 14/129 (10%)
Query: 120 TTKVIIFANYRVV---VAEIFDVLKPLEPMVKASMFVGQSSG----------VTQQEQKE 166
T + IIF R V +A++ + L +++++ +G +G + + Q++
Sbjct: 378 TFQGIIFVEQRHVAACLAKMLPRVPQLSHLIRSAQLIGHGTGNSMYKIRGKGMAVRNQQD 437
Query: 167 IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVI 226
++K FR + N L+ATSV EEGLD DLVI FD + + +Q GR R + +I
Sbjct: 438 VVKLFREKQINLLVATSVAEEGLDFPACDLVIRFDPLQHMVGYLQSRGR-ARHQTSTFII 496
Query: 227 LLTQGREAH 235
++ QG EAH
Sbjct: 497 MVEQGHEAH 505
>gi|329954895|ref|ZP_08295912.1| DEAD/DEAH box helicase [Bacteroides clarus YIT 12056]
gi|328526999|gb|EGF54010.1| DEAD/DEAH box helicase [Bacteroides clarus YIT 12056]
Length = 499
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK ++ + VG+ S + Q +++E+M +F+AG N L+
Sbjct: 310 RVIIFASSKLKVKEVTKALKQMK------LNVGEMHSDLEQAQREEVMYEFKAGRVNILV 363
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQ 238
AT + G+DI +I LVI +D V R+GRT R N + +E NF+
Sbjct: 364 ATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGVALTFVNEKEQTNFK 421
>gi|327351907|gb|EGE80764.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis ATCC 18188]
Length = 1205
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 99 KFIRLREILESHFRLHAE-KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS 157
KF+RL +L L+A+ K E + +IF + + + L M K +
Sbjct: 805 KFVRLLALLGD---LYADDKNEDARALIFVDRQEAADGLLRDL-----MHKGYPCMSIHG 856
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
G Q ++ + F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTG
Sbjct: 857 GKDQVDRDSTIDDFKAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTG 916
Query: 218 RKRN-GRCVILLTQGREAHN------FQTSMQTCKSYVEKIINN 254
R N G V LT+ +E ++ + S Q V+K++N+
Sbjct: 917 RAGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPVQKLVNS 960
>gi|225559706|gb|EEH07988.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
capsulatus G186AR]
Length = 1201
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 99 KFIRLREILESHFRLHAE-KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS 157
KF+RL +L L+A+ K E + +IF + + + L M K +
Sbjct: 799 KFVRLLALLG---ELYADDKNEDARALIFVDRQEAADGLLRDL-----MHKGYPCMSIHG 850
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
G Q ++ + F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTG
Sbjct: 851 GKDQVDRDSTIDDFKAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTG 910
Query: 218 RKRN-GRCVILLTQGREAHN------FQTSMQTCKSYVEKIINN 254
R N G V LT+ +E ++ + S Q V+K++N+
Sbjct: 911 RAGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPVQKLVNS 954
>gi|335428124|ref|ZP_08555043.1| DEAD/DEAH box helicase domain-containing protein [Haloplasma
contractile SSD-17B]
gi|335431048|ref|ZP_08557933.1| DEAD/DEAH box helicase domain-containing protein [Haloplasma
contractile SSD-17B]
gi|334887214|gb|EGM25551.1| DEAD/DEAH box helicase domain-containing protein [Haloplasma
contractile SSD-17B]
gi|334893347|gb|EGM31563.1| DEAD/DEAH box helicase domain-containing protein [Haloplasma
contractile SSD-17B]
Length = 482
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 124 IIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATS 183
IIF N R +V ++ + + ++ + G+ Q++++ +M F+ G F L+AT
Sbjct: 247 IIFCNTRQMVDDVNEEMTSIKSTCETI-----HGGMEQRDRQRVMNDFKLGYFRYLVATD 301
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCVILLTQGREAHNFQTSMQ 242
V G+DI +I LVI +D + V R+GRTGR R G+ + +T+ N + S++
Sbjct: 302 VAARGIDIDDISLVINYDLPREKESYVHRIGRTGRIGREGKAITFVTR-----NERESLK 356
Query: 243 TCKSYVEKII 252
+ Y+E+ I
Sbjct: 357 DIEQYIERSI 366
>gi|217069801|gb|ACA61272.1| retinoic acid inducible protein I [Anas platyrhynchos]
gi|388897634|gb|AFK82315.1| retinoic acid inducible protein I [Anas platyrhynchos]
Length = 933
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 85/156 (54%), Gaps = 18/156 (11%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSG 158
IL+ +R + + T+ ++FA R +V+ + ++ P+ +K + +G Q++G
Sbjct: 618 ILDDAYRYNPQ----TRTLLFAKTRALVSALKKCMEENPILNYIKPGVLMGRGRRDQTTG 673
Query: 159 VTQQEQKEIMKKFRAGEFN-TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
+T QK ++ F+ + N LIATSV +EG+DI + +LV+ ++ + KM+Q GR G
Sbjct: 674 MTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGR-G 732
Query: 218 RKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIIN 253
R +C+++ ++ N + C Y E+++N
Sbjct: 733 RAAGSKCILVTSKTEVVEN-----EKCNRYKEEMMN 763
>gi|11344594|gb|AAG34368.1|AF095844_1 melanoma differentiation associated protein-5 [Homo sapiens]
Length = 1025
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 700 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 755
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 756 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 815
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 816 MVQARGRA 823
>gi|410968747|ref|XP_003990861.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Felis catus]
Length = 1018
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 692 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENKKFAEVGVKAHHLI 747
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 748 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 807
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 808 MVQARGRA 815
>gi|402888490|ref|XP_003907593.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Papio anubis]
Length = 837
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 512 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 567
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 568 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 627
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 628 MVQARGRA 635
>gi|426337537|ref|XP_004032759.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Gorilla gorilla gorilla]
Length = 1025
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 700 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 755
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 756 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 815
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 816 MVQARGRA 823
>gi|12621066|gb|AAG54076.1| RNA helicase-DEAD box protein RH116 [Homo sapiens]
Length = 1025
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 700 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 755
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 756 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 815
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 816 MVQARGRA 823
>gi|16551654|dbj|BAB71141.1| unnamed protein product [Homo sapiens]
Length = 468
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 14/127 (11%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 143 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 198
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G N LIAT+V EEGLDI E ++VI + + I
Sbjct: 199 GAGHSSEFKPMTQNEQKEVISKFRTGRINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 258
Query: 209 MVQRLGR 215
MVQ GR
Sbjct: 259 MVQARGR 265
>gi|27886568|ref|NP_071451.2| interferon-induced helicase C domain-containing protein 1 [Homo
sapiens]
gi|134047802|sp|Q9BYX4.3|IFIH1_HUMAN RecName: Full=Interferon-induced helicase C domain-containing
protein 1; AltName: Full=Clinically amyopathic
dermatomyositis autoantigen 140 kDa; Short=CADM-140
autoantigen; AltName: Full=Helicase with 2 CARD domains;
Short=Helicard; AltName: Full=Interferon-induced with
helicase C domain protein 1; AltName: Full=Melanoma
differentiation-associated protein 5; Short=MDA-5;
AltName: Full=Murabutide down-regulated protein;
AltName: Full=RIG-I-like receptor 2; Short=RLR-2;
AltName: Full=RNA helicase-DEAD box protein 116
Length = 1025
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 700 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 755
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 756 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 815
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 816 MVQARGRA 823
>gi|397500570|ref|XP_003820983.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Pan paniscus]
Length = 1025
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 700 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 755
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 756 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 815
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 816 MVQARGRA 823
>gi|334322694|ref|XP_001366879.2| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Monodelphis
domestica]
Length = 679
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 25/217 (11%)
Query: 12 AQFPHINRDLDRMIQRDFH---VTHSLASALENLVTYGLRSFYNNLVEVSKEDGSCPILG 68
A+ H+ R + M R ++ + H A++ L + L SFY ++ +L
Sbjct: 270 AEQGHLQRRVFAMHLRRYNDALLIHGTVRAVDALTS--LASFYTE-----EQMTKVGVLP 322
Query: 69 KDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA- 127
+ L L + K L +++S+ + + K L +ILE F + ++ IIFA
Sbjct: 323 AERWLLQLFDRHKEAL--ALLASDAQFENPKLKDLEDILEELF----SSPDPSRGIIFAR 376
Query: 128 ---NYRVVVAEIFDVLKPLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFNTL 179
+ R +V + + + +KA + G Q + +TQ EQ+E++++FR G N L
Sbjct: 377 TRRSARALVLWLQEQPRLQRLGIKAHVLTGAGNSSQITHMTQTEQREVIQRFREGTLNLL 436
Query: 180 IATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
+ATSV EEGLDI + ++++ +D + I M+Q GR
Sbjct: 437 VATSVAEEGLDIPQCNMIVRYDLLTNEISMMQARGRA 473
>gi|410220348|gb|JAA07393.1| interferon induced with helicase C domain 1 [Pan troglodytes]
Length = 1025
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 700 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 755
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 756 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 815
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 816 MVQARGRA 823
>gi|353252003|pdb|4A2W|A Chain A, Structure Of Full-Length Duck Rig-I
gi|353252004|pdb|4A2W|B Chain B, Structure Of Full-Length Duck Rig-I
Length = 936
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 85/156 (54%), Gaps = 18/156 (11%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSG 158
IL+ +R + + T+ ++FA R +V+ + ++ P+ +K + +G Q++G
Sbjct: 621 ILDDAYRYNPQ----TRTLLFAKTRALVSALKKCMEENPILNYIKPGVLMGRGRRDQTTG 676
Query: 159 VTQQEQKEIMKKFRAGEFN-TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
+T QK ++ F+ + N LIATSV +EG+DI + +LV+ ++ + KM+Q GR G
Sbjct: 677 MTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGR-G 735
Query: 218 RKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIIN 253
R +C+++ ++ N + C Y E+++N
Sbjct: 736 RAAGSKCILVTSKTEVVEN-----EKCNRYKEEMMN 766
>gi|312079013|ref|XP_003141990.1| hypothetical protein LOAG_06406 [Loa loa]
Length = 744
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
G++ G + +Q++I+ +F +G+ L ATSV EEG+DI + +LVI +D + I VQR
Sbjct: 494 GENGGQSINQQRDILARFTSGDIKILCATSVAEEGIDIQKCNLVIKYDYVTNEIAHVQRR 553
Query: 214 GRTGRKRNGRCVILLT----QGREAHN 236
GR GR N RC++L Q RE N
Sbjct: 554 GR-GRAANSRCLLLTCDPKLQTREEKN 579
>gi|154508882|ref|ZP_02044524.1| hypothetical protein ACTODO_01393 [Actinomyces odontolyticus ATCC
17982]
gi|153798516|gb|EDN80936.1| DEAD/DEAH box helicase [Actinomyces odontolyticus ATCC 17982]
Length = 722
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNT 178
E I+F R V E+ LE + G S V Q E++ ++++ + G +
Sbjct: 292 EADAAIVFVRTRADVEEV-----SLELSSRGFRAAGISGDVAQTERERMVERLKNGSLDV 346
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLT 229
L+AT V GLD+ I LV+ FD + P V R+GRTGR R GR + T
Sbjct: 347 LVATDVAARGLDVERISLVVNFDVPREPEAYVHRIGRTGRAGREGRALTFFT 398
>gi|84627487|gb|AAI11751.1| Interferon induced with helicase C domain 1 [Homo sapiens]
gi|119631757|gb|EAX11352.1| interferon induced with helicase C domain 1 [Homo sapiens]
Length = 1025
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 700 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 755
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 756 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 815
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 816 MVQARGRA 823
>gi|212557802|gb|ACJ30256.1| Helicase, DEAD box [Shewanella piezotolerans WP3]
Length = 446
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 157 SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
G +Q+ +++I+ F+AGE LIAT V GLDI E+ LVI +D + R+GRT
Sbjct: 275 GGRSQEVREKILADFKAGEIGLLIATGVAARGLDIDELPLVINYDLPYPADDYIHRIGRT 334
Query: 217 GRK-RNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTP 275
GR NG V L+++ +F+ ++ +S + ++ + I + + + P
Sbjct: 335 GRAGANGEAVSLVSK----DDFK-NLCMIESRLGHLLERREIEGFAPRKEVPISVLNFKP 389
Query: 276 RIKCLHIVVKD-RVTPAKPS-----KKKPKENEKANKKSKKKLETDGNSEPAGKQN 325
+ K + KD + +KPS KK +N+ AN +SK L GN P N
Sbjct: 390 KFKKMTEKTKDNEQSKSKPSLGTSPSKKRNDNKSANNRSKSNLRDSGNKLPPNPWN 445
>gi|149054239|gb|EDM06056.1| similar to hypothetical protein FLJ11354 (predicted), isoform CRA_a
[Rattus norvegicus]
gi|149054240|gb|EDM06057.1| similar to hypothetical protein FLJ11354 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 374
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 12/130 (9%)
Query: 105 EILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG-----Q 155
E+LE + T+ IIF R + + L+ + +K M +G Q
Sbjct: 48 EMLEGILLKQFGSPDHTRGIIFTRTRQTASSLLLWLRQQPCLQTVNIKPQMLIGAGNTGQ 107
Query: 156 SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
S+ +TQ++Q+E++++FR G+ N L+ATSV EEGLDI + ++V+ + + I MVQ
Sbjct: 108 STHMTQKDQQEVIQEFRDGKLNLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQ---A 164
Query: 216 TGRKRNGRCV 225
GR R G+ V
Sbjct: 165 RGRARAGQSV 174
>gi|121701983|ref|XP_001269256.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|143359917|sp|A1CQA9.1|PRP5_ASPCL RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|119397399|gb|EAW07830.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 1192
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL EIL + + A E + +IF + E D L E M K + G
Sbjct: 790 KFVRLLEILGNLYSDDAN--EDARSLIFVERQ----EAADALL-RELMRKGYPCMSIHGG 842
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ ++ F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 843 KDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 902
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIINN 254
N G V LT+ +E A + S Q V+K++++
Sbjct: 903 AGNTGTAVTFLTEEQERYSVDIAKALKQSGQQVPEPVQKMVDS 945
>gi|212529276|ref|XP_002144795.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
gi|210074193|gb|EEA28280.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
Length = 1497
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSSG------ 158
+L H E+ TK I+F R + V K L P ++ + VG SG
Sbjct: 413 VLYQHLTKRFEEAPNTKCIVFTKQRNTAKLLEVVFKQLSVPHMRPGVLVGIGSGDICGMN 472
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
T +Q + +FR GE N L ATSV EEGLDI + +LV+ FD ++ I+ VQ GR R
Sbjct: 473 STYPQQFKATIEFRKGELNCLFATSVAEEGLDIPDCNLVVRFDLYETLIQYVQSRGRARR 532
Query: 219 KRN 221
+
Sbjct: 533 SES 535
>gi|440690962|pdb|4GL2|A Chain A, Structural Basis For Dsrna Duplex Backbone Recognition By
Mda5
gi|440690963|pdb|4GL2|B Chain B, Structural Basis For Dsrna Duplex Backbone Recognition By
Mda5
Length = 699
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 382 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 437
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 438 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 497
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 498 MVQARGRA 505
>gi|392967949|ref|ZP_10333365.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
gi|387842311|emb|CCH55419.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
Length = 663
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 123 VIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIAT 182
+++F N + V EI + L+ ++ M G + Q ++ +M KFRAG N L+AT
Sbjct: 292 LLVFCNTKRKVDEIVEDLQ-----IRGYMAEGLHGDLRQAQRNNVMSKFRAGTTNILVAT 346
Query: 183 SVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLTQGR-EAHNFQTS 240
V G+D+ ++D VI FD V R+GRTGR ++GR L+ GR E + F+
Sbjct: 347 DVAARGIDVDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFSLV--GRDEKYRFREI 404
Query: 241 MQTCKSYVEK 250
K VEK
Sbjct: 405 QTYTKVKVEK 414
>gi|325089715|gb|EGC43025.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Ajellomyces
capsulatus H88]
Length = 1199
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 99 KFIRLREILESHFRLHAE-KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS 157
KF+RL +L L+A+ K E + +IF + + + L M K +
Sbjct: 797 KFVRLLALLG---ELYADDKNEDARALIFVDRQEAADGLLRDL-----MHKGYPCMSIHG 848
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
G Q ++ + F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTG
Sbjct: 849 GKDQVDRDSTIDDFKAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTG 908
Query: 218 RKRN-GRCVILLTQGREAHN------FQTSMQTCKSYVEKIINN 254
R N G V LT+ +E ++ + S Q V+K++N+
Sbjct: 909 RAGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPVQKLVNS 952
>gi|332814684|ref|XP_003309348.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Pan troglodytes]
Length = 1024
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 699 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 754
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 755 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 814
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 815 MVQARGRA 822
>gi|332234337|ref|XP_003266368.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Nomascus leucogenys]
Length = 976
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 651 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 706
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 707 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 766
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 767 MVQARGRA 774
>gi|240280856|gb|EER44360.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Ajellomyces
capsulatus H143]
Length = 1200
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 99 KFIRLREILESHFRLHAE-KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS 157
KF+RL +L L+A+ K E + +IF + + + L M K +
Sbjct: 797 KFVRLLALLG---ELYADDKNEDARALIFVDRQEAADGLLRDL-----MHKGYPCMSIHG 848
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
G Q ++ + F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTG
Sbjct: 849 GKDQVDRDSTIDDFKAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTG 908
Query: 218 RKRN-GRCVILLTQGREAHN------FQTSMQTCKSYVEKIINN 254
R N G V LT+ +E ++ + S Q V+K++N+
Sbjct: 909 RAGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPVQKLVNS 952
>gi|354487717|ref|XP_003506018.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX58-like [Cricetulus griseus]
Length = 907
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 155 QSSGVTQQEQKEIMKKFRA-GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
Q++G+T QK ++ FRA G+ N LIATSV +EG+DI + +LVI ++ + IKM+Q
Sbjct: 651 QATGMTLPAQKYALEAFRASGDNNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTR 710
Query: 214 GRTGRKRNGRCVILLTQG 231
GR GR R+ +C +L +
Sbjct: 711 GR-GRARDSKCFLLTSNA 727
>gi|372270527|ref|ZP_09506575.1| ATP-dependent DEAD/DEAH box helicase [Marinobacterium stanieri S30]
Length = 460
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
+TQ E+K +M R+G+ N L+AT V GLDI +DLVI FD + + V R+GRTGR
Sbjct: 284 MTQDERKHVMGLMRSGKINVLVATDVAARGLDIEGLDLVINFDMARKGDEHVHRVGRTGR 343
Query: 219 K-RNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYA-NLAKNGPRMIPA 271
+ R G V L++ H M + + Y++ +++ + GPR + A
Sbjct: 344 QSREGLAVCLIS-----HTEWNLMSSIERYLKLQFERRTLKGLEGSYKGPRKVKA 393
>gi|222629185|gb|EEE61317.1| hypothetical protein OsJ_15421 [Oryza sativa Japonica Group]
Length = 1632
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQSSG---VTQQEQKEIMKKFRA 173
E K I+F V I ++L+ L+ + K VG SG +++ + I+++F +
Sbjct: 378 ENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSKNMSRNKMDAIVQRFSS 437
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
GE N L+ATSVGEEGLDI LV+ FD ++ +Q GR R + V+LL + +
Sbjct: 438 GEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGR-ARMTKSKYVVLLERENQ 496
Query: 234 AH 235
+H
Sbjct: 497 SH 498
>gi|348562460|ref|XP_003467028.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like [Cavia
porcellus]
Length = 678
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 147 VKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFD 201
++A M +G QS+ +TQ+ Q+E+++KFR G N L+ATSV EEGLDI + +V+ +
Sbjct: 398 IRAQMLIGAGNSSQSAHMTQRNQQEVIQKFRMGSLNLLVATSVAEEGLDIAKCSVVVRYG 457
Query: 202 AQKSPIKMVQRLGRT 216
+ I MVQ GR
Sbjct: 458 LLTNEISMVQARGRA 472
>gi|293192664|ref|ZP_06609618.1| ATP-dependent RNA helicase DeaD [Actinomyces odontolyticus F0309]
gi|292820171|gb|EFF79168.1| ATP-dependent RNA helicase DeaD [Actinomyces odontolyticus F0309]
Length = 722
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNT 178
E I+F R V E+ LE + G S V Q E++ ++++ + G +
Sbjct: 292 EADAAIVFVRTRADVEEV-----SLELSSRGFRAAGISGDVAQTERERMVERLKNGSLDV 346
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLT 229
L+AT V GLD+ I LV+ FD + P V R+GRTGR R GR + T
Sbjct: 347 LVATDVAARGLDVERISLVVNFDVPREPEAYVHRIGRTGRAGREGRALTFFT 398
>gi|343469629|emb|CCD17439.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 828
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 119 ETTKVIIFANYRVVVAEIF----------DVLKPLEPMVKASMFV-GQSSGVTQQEQKEI 167
E+ + I+F R V +I DV PL + + S F+ G+ +T +QK
Sbjct: 419 ESIRAIVFCETRACVYKIVEEIESVPCLRDVYMPLPLVGRGSSFLDGEKVNMTDAKQKGA 478
Query: 168 MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
+K FR GE L+ATSV EEG+D+ + +LVI FD+ S +Q GR R++N +IL
Sbjct: 479 LKAFRQGEARLLVATSVCEEGMDVAQCNLVIRFDSCVSLSSFIQSRGRA-RRKNALFIIL 537
>gi|322702026|gb|EFY93774.1| Dicer-like protein 1 [Metarhizium acridum CQMa 102]
Length = 1524
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 98 LKFIRLREILESHFRLHAEKGETTKVIIFANYRVV---VAEIFDVLKPLEPMVKASMFVG 154
LK L E+L F E + T+ I+F R + ++E F++ P + A VG
Sbjct: 450 LKVHALHEVLHDVF----ECQQGTRCIVFVQKRYIAFLLSEAFNLSVLRVPDMAAGFVVG 505
Query: 155 Q---SSGVTQ---QEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
SS + ++Q E + +FR GE N + AT V EEG+DI E DL+I FD S I+
Sbjct: 506 SQPASSSIVNMSIKDQTEALDRFRYGETNCIFATQVAEEGIDIPECDLIIRFDLYDSAIQ 565
Query: 209 MVQRLGRT 216
+Q GR
Sbjct: 566 YIQSKGRA 573
>gi|296923416|emb|CAZ27720.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Oncorhynchus mykiss]
Length = 623
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 13/174 (7%)
Query: 68 GKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
G D L L Q+ ++++ +S + + + K +L+ L F +G ++ I+F+
Sbjct: 324 GTDFFLLGLYQE--NEVELRKLSGDARFENPKMGKLQNTLLEQF----VQGGHSRGILFS 377
Query: 128 NYRVVVAEIFDVLKPLEPM----VKASMFVGQSSGV---TQQEQKEIMKKFRAGEFNTLI 180
R + ++D + + ++A++ G +G+ TQ EQK+ ++ FR G N LI
Sbjct: 378 KTRKSICCLYDWVSNNPALQRAGIRAAILTGAGNGINYMTQNEQKDTIRNFRLGSLNLLI 437
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREA 234
+TSV EEGLDI E +LV+ + + I Q GR + V+ GREA
Sbjct: 438 STSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARASDSVYSVVAQAGGREA 491
>gi|410902733|ref|XP_003964848.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like [Takifugu
rubripes]
Length = 681
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 20/194 (10%)
Query: 47 LRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREI 106
L+ FY + V+ I G D L L ++ + +L + S Y + K +L +
Sbjct: 311 LKDFYRSKVDTE-------IDGTDFFLMGLYRENRAELKHHAGDSRY--ENPKMSKLESV 361
Query: 107 LESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVGQSSGV--- 159
L + FR G ++ I+F+ R + D + + +KA++ G +G+
Sbjct: 362 LLNQFR----PGGESRGILFSKTRKSTHCLCDWVSTSSTLQQAGIKAAILTGAGNGIDTM 417
Query: 160 TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK 219
T +QK+ ++ FR G+ N LI+TSV EEGLDI E +LV+ + + I Q GR +
Sbjct: 418 THVKQKDTIRSFRQGDLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQKQASGRARAR 477
Query: 220 RNGRCVILLTQGRE 233
+ VI GRE
Sbjct: 478 DSQYSVIAQKGGRE 491
>gi|392596196|gb|EIW85519.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1520
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 22/160 (13%)
Query: 94 AWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVV---VAEIFDVLKPLEPMVKAS 150
AW K L ++L H H+ + I+F R V +A+I + L ++ +
Sbjct: 392 AWCAPKVKALVDVLLEH---HSASPGSFHGIVFVEQRHVAMCLAKILPRIPELREHIRCA 448
Query: 151 MFVG---------------QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEID 195
VG Q+ G+ Q++I++ FR G+ N LIATSV EEGLD D
Sbjct: 449 ELVGHGTGHQHKKNQPPTAQARGMGLARQQDIVRSFREGKLNLLIATSVAEEGLDFPACD 508
Query: 196 LVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
+V+ FD + VQ GR R + VI++ G + H
Sbjct: 509 IVVRFDPVHHMVGYVQSRGR-ARTKTSAFVIMVQAGYDTH 547
>gi|426221009|ref|XP_004004704.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Ovis aries]
Length = 1023
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K I+LR I+E + R + + IIF R + I + K E VKA +
Sbjct: 697 KLIKLRNTIMEQYSRTEG----SARGIIFTKTRQSAYALSQWITENEKFSEVGVKAHHLI 752
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 753 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 812
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 813 MVQARGRA 820
>gi|353251998|pdb|4A2Q|A Chain A, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
gi|353251999|pdb|4A2Q|B Chain B, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
gi|353252000|pdb|4A2Q|D Chain D, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
gi|353252001|pdb|4A2Q|E Chain E, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
Length = 797
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 85/156 (54%), Gaps = 18/156 (11%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSG 158
IL+ +R + + T+ ++FA R +V+ + ++ P+ +K + +G Q++G
Sbjct: 621 ILDDAYRYNPQ----TRTLLFAKTRALVSALKKCMEENPILNYIKPGVLMGRGRRDQTTG 676
Query: 159 VTQQEQKEIMKKFRAGEFN-TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
+T QK ++ F+ + N LIATSV +EG+DI + +LV+ ++ + KM+Q GR G
Sbjct: 677 MTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGR-G 735
Query: 218 RKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIIN 253
R +C+++ ++ N + C Y E+++N
Sbjct: 736 RAAGSKCILVTSKTEVVEN-----EKCNRYKEEMMN 766
>gi|319656775|gb|ADV58759.1| retinoic acid inducible protein I [Anser anser]
Length = 934
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 76/141 (53%), Gaps = 14/141 (9%)
Query: 121 TKVIIFANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRA 173
T+ ++FA R +VA + ++ P+ +K + +G Q +G+T QK ++ F+
Sbjct: 630 TRTLLFAKTRALVAALKKCMEENPILSYIKPDVLMGRGRRDQKTGMTLPSQKGVLDAFKT 689
Query: 174 G-EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGR 232
+ LIATSV +EG+DI + +LV+ ++ + KM+Q GR GR +C+++ ++
Sbjct: 690 SKDSRLLIATSVADEGIDIAQCNLVVLYEYSGNVTKMIQVRGR-GRAAGSKCILVTSKTE 748
Query: 233 EAHNFQTSMQTCKSYVEKIIN 253
N + C Y E+++N
Sbjct: 749 VVEN-----EKCNRYKEEMMN 764
>gi|302793023|ref|XP_002978277.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
gi|300154298|gb|EFJ20934.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
Length = 1728
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 116 EKGETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQ--SSGVTQQEQKEIMKKF 171
E E + IIF + V + VL L + V++ VG S V+ + + + KF
Sbjct: 493 EHVEDFRAIIFVDRVVAALTLPCVLSELPSLKYVRSGSLVGHNNSQDVSTRHMHDSLSKF 552
Query: 172 RAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
R G N L+ATSV EEGLDI + ++V+ FD K+ + +Q GR RK +++L +G
Sbjct: 553 RDGSLNVLVATSVAEEGLDIRQCNVVVRFDLAKTVLAYIQSRGR-ARKPGSDYILMLEKG 611
Query: 232 REAH 235
+ H
Sbjct: 612 NKVH 615
>gi|32488296|emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group]
gi|116311061|emb|CAH67991.1| OSIGBa0157K09-H0214G12.2 [Oryza sativa Indica Group]
Length = 1604
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQSSG---VTQQEQKEIMKKFRA 173
E K I+F V I ++L+ L+ + K VG SG +++ + I+++F +
Sbjct: 390 ENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSKNMSRNKMDAIVQRFSS 449
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
GE N L+ATSVGEEGLDI LV+ FD ++ +Q GR R + V+LL + +
Sbjct: 450 GEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGR-ARMTKSKYVVLLERENQ 508
Query: 234 AH 235
+H
Sbjct: 509 SH 510
>gi|326670834|ref|XP_694124.3| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Danio rerio]
Length = 1035
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 60 EDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE 119
E+G+ I + L L + K KL + +Y ++L +L+ I+ F E
Sbjct: 627 EEGNITITDTERFLFTLFKDKKAKLQELMGKPQYENNNLA--QLKTIILKEFSTR----E 680
Query: 120 TTKVIIFANYRVVVAEIFDVL----KPLEPMVKASMFVGQSSG-----VTQQEQKEIMKK 170
+ IIF R+ + + K E V+AS +G +T EQK+++K+
Sbjct: 681 KARGIIFTQTRLSAIALCQWIEENPKFDEVGVRASYLIGGGDQSVVKPMTAAEQKDVLKR 740
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
FR GE N LIAT+V EEGLDI E ++VI + + + M+Q GR GR + ++
Sbjct: 741 FRTGEINLLIATTVAEEGLDIAECNVVIRYCLVTNEVAMIQARGR-GRAEDSSYTLVAEA 799
Query: 231 G 231
G
Sbjct: 800 G 800
>gi|63054443|ref|NP_588215.2| dicer [Schizosaccharomyces pombe 972h-]
gi|1351642|sp|Q09884.1|DCR1_SCHPO RecName: Full=Protein Dicer; AltName: Full=Cell cycle control
protein dcr1; AltName: Full=RNA interference pathway
protein dcr1; Includes: RecName: Full=Endoribonuclease
dcr1; Includes: RecName: Full=ATP-dependent helicase
dcr1
gi|157310516|emb|CAB41233.2| dicer [Schizosaccharomyces pombe]
Length = 1374
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 12/137 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSS 157
K +L E+L++ +R K ++ + +IF + + +K L P ++A F+G
Sbjct: 344 KVFKLLELLKATYR----KSDSVRTVIFVERKATAFTLSLFMKTLNLPNIRAHSFIGHGP 399
Query: 158 G------VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
+T + QK+ + KF+ G++N LIAT+V EEG+D+ +LVI F+ ++ + VQ
Sbjct: 400 SDQGEFSMTFRRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYVQ 459
Query: 212 RLGRTGRKRNGRCVILL 228
GR R + +I L
Sbjct: 460 SRGR-ARAMASKFLIFL 475
>gi|410108626|gb|AFP73448.2| retinoic acid inducible protein 1, partial [Anser anser]
Length = 672
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 18/163 (11%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK--PLEPMVKASMFVG-- 154
K L IL+ +R + + T+ ++FA R +VA + ++ P+ +K + +G
Sbjct: 350 KLEELACILDDAYRYNPQ----TRTLLFAKTRALVAALKKCMEENPILSYIKPDVLMGRG 405
Query: 155 ---QSSGVTQQEQKEIMKKFRAG-EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
Q +G+T QK ++ F+ + LIATSV +EG+DI + +LV+ ++ + KM+
Sbjct: 406 RRDQKTGMTLPSQKGVLDAFKTSKDSRLLIATSVADEGIDIAQCNLVVLYEYSGNVTKMI 465
Query: 211 QRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIIN 253
Q GR GR +C+++ ++ N + C Y E+ +N
Sbjct: 466 QVRGR-GRAAGSKCILVTSKTEVVEN-----EKCNRYKEEAMN 502
>gi|73748116|ref|YP_307355.1| ATP-dependent RNA helicase, DEAD [Dehalococcoides sp. CBDB1]
gi|147668820|ref|YP_001213638.1| DEAD/DEAH box helicase [Dehalococcoides sp. BAV1]
gi|289432193|ref|YP_003462066.1| DEAD/DEAH box helicase [Dehalococcoides sp. GT]
gi|452203027|ref|YP_007483160.1| ATP-dependent RNA helicase RhlE [Dehalococcoides mccartyi DCMB5]
gi|452204446|ref|YP_007484575.1| ATP-dependent RNA helicase RhlE [Dehalococcoides mccartyi BTF08]
gi|73659832|emb|CAI82439.1| ATP-dependent RNA helicase, DEAD [Dehalococcoides sp. CBDB1]
gi|146269768|gb|ABQ16760.1| DEAD/DEAH box helicase domain protein [Dehalococcoides sp. BAV1]
gi|288945913|gb|ADC73610.1| DEAD/DEAH box helicase domain protein [Dehalococcoides sp. GT]
gi|452110086|gb|AGG05818.1| ATP-dependent RNA helicase RhlE [Dehalococcoides mccartyi DCMB5]
gi|452111502|gb|AGG07233.1| ATP-dependent RNA helicase RhlE [Dehalococcoides mccartyi BTF08]
Length = 561
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 17/172 (9%)
Query: 96 SHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ 155
SH K L EIL++ ET V+IFA + + D + KA
Sbjct: 223 SHQKTPLLLEILKTV--------ETKSVLIFARTKYGAENLADEIS------KAGFTTAS 268
Query: 156 SSG-VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLG 214
G ++Q + +M+ FR G F L+AT + GLDI I VI +D SP R+G
Sbjct: 269 LQGNLSQNRRHAVMEGFRRGNFKILVATDIAARGLDIDHISHVINYDMPDSPEDYTHRIG 328
Query: 215 RTGR-KRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNG 265
RTGR R G+ L+T GR+ + + S ++++ + YA +G
Sbjct: 329 RTGRFDRTGQAFSLVT-GRDGDMVRDIQRLLSSPIQRLRVDGFDYATTRNDG 379
>gi|389860639|ref|YP_006362879.1| DEAD/DEAH box helicase [Thermogladius cellulolyticus 1633]
gi|388525543|gb|AFK50741.1| DEAD/DEAH box helicase domain protein [Thermogladius cellulolyticus
1633]
Length = 929
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG-VTQQEQKEIMKKFRAGEFN 177
E+ V++F N R + + +LK L + + + G ++++ ++E+ ++FR+GE
Sbjct: 250 ESRSVLVFTNTRTMAEYMSSLLKNLSERLGLDLQISVHHGSLSKEHREEVERRFRSGEIK 309
Query: 178 TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNG 222
++ATS E G+DIG +D VI + + + ++VQR+GR+G + G
Sbjct: 310 AVVATSSLELGIDIGSVDYVIQYLSPRQVTRLVQRIGRSGHRLGG 354
>gi|157279689|dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group]
Length = 1631
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQSSG---VTQQEQKEIMKKFRA 173
E K I+F V I ++L+ L+ + K VG SG +++ + I+++F +
Sbjct: 390 ENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSKNMSRNKMDAIVQRFSS 449
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
GE N L+ATSVGEEGLDI LV+ FD ++ +Q GR R + V+LL + +
Sbjct: 450 GEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGR-ARMTKSKYVVLLERENQ 508
Query: 234 AH 235
+H
Sbjct: 509 SH 510
>gi|19074653|ref|NP_586159.1| putative ATP-DEPENDENT RNA HELICASE [Encephalitozoon cuniculi
GB-M1]
gi|74621115|sp|Q8SR63.1|RRP3_ENCCU RecName: Full=ATP-dependent rRNA helicase RRP3
gi|19069295|emb|CAD25763.1| putative ATP-DEPENDENT RNA HELICASE [Encephalitozoon cuniculi
GB-M1]
gi|449330220|gb|AGE96481.1| putative ATP-dependent RNA helicase [Encephalitozoon cuniculi]
Length = 400
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
++Q++++E M+ F+ FN L+ T +G GLDI +DLVI FD KS + R+GRT R
Sbjct: 273 LSQEKREEAMRSFKESRFNVLVCTDLGSRGLDISHVDLVINFDVPKSGKDYIHRVGRTAR 332
Query: 219 K-RNGRCVILLTQ 230
R+G + L+TQ
Sbjct: 333 AGRSGTAITLVTQ 345
>gi|399527779|ref|ZP_10767466.1| DEAD/DEAH box helicase [Actinomyces sp. ICM39]
gi|398361715|gb|EJN45457.1| DEAD/DEAH box helicase [Actinomyces sp. ICM39]
Length = 719
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNT 178
E I+F R V E+ LE + G S V Q E++ ++++ + G +
Sbjct: 289 EADAAIVFVRTRADVEEV-----SLELSGRGFRAAGISGDVAQTERERMVERLKNGSLDV 343
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLT 229
L+AT V GLD+ I LV+ FD + P V R+GRTGR R GR + T
Sbjct: 344 LVATDVAARGLDVERISLVVNFDVPREPEAYVHRIGRTGRAGREGRALTFFT 395
>gi|346318518|gb|EGX88121.1| RNase3 domain protein [Cordyceps militaris CM01]
Length = 1455
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYR---VVVAEIFDVLKPLEPMVKASMFVGQ 155
K LRE L F EK TK ++F + + +V+A+ F + A +G
Sbjct: 390 KLTVLRETLCVAF----EKNRATKCLVFVDEQYVALVLADYFQQPGTAPSGMVADFMIGL 445
Query: 156 S-----SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
S S V+Q++Q + F+ G+ N L ATSV EEGLDI DLVI FD S I+ +
Sbjct: 446 SRASAFSNVSQRQQIMKLNNFKFGDTNCLFATSVAEEGLDIPACDLVIRFDMCVSAIQYI 505
Query: 211 QRLGRTGRKRNGRCVILLTQGREAH 235
Q GR RK + + ++ Q H
Sbjct: 506 QSRGR-ARKASSVFITMMEQDNNQH 529
>gi|218195189|gb|EEC77616.1| hypothetical protein OsI_16596 [Oryza sativa Indica Group]
Length = 1576
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQSSG---VTQQEQKEIMKKFRA 173
E K I+F V I ++L+ L+ + K VG SG +++ + I+++F +
Sbjct: 329 ENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSKNMSRNKMDAIVQRFSS 388
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
GE N L+ATSVGEEGLDI LV+ FD ++ +Q GR R + V+LL + +
Sbjct: 389 GEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGR-ARMTKSKYVVLLERENQ 447
Query: 234 AH 235
+H
Sbjct: 448 SH 449
>gi|345880198|ref|ZP_08831755.1| hypothetical protein HMPREF9431_00419 [Prevotella oulorum F0390]
gi|343923775|gb|EGV34459.1| hypothetical protein HMPREF9431_00419 [Prevotella oulorum F0390]
Length = 544
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIF ++ V ++ L+ + + G+ S + Q + ++M KF++G+F+ L+
Sbjct: 247 RVIIFCGSKMKVKQVAGALQ------RKHINCGEMHSDLDQATRDDVMFKFKSGQFDVLV 300
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCVILLTQGREAHNFQT 239
AT V G+DI +I +VI +D V R+GRT R R G + +++ +AH FQ
Sbjct: 301 ATDVISRGIDIDDITMVINYDVPHDAEDYVHRIGRTARAARTGTAITFVSED-DAHYFQQ 359
Query: 240 SMQTCKSYVEKI 251
+ S VEK+
Sbjct: 360 IEKFLGSEVEKL 371
>gi|326476402|gb|EGE00412.1| Pre-mRNA-processing ATP-dependent RNA helicase prp5 [Trichophyton
tonsurans CBS 112818]
Length = 1182
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + ++ E + ++F + + + L M K + G
Sbjct: 781 KFVRLLELLGNLY--SDDENEDARTLVFVDRQEAADRLLRDL-----MRKGYPCMSIHGG 833
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ + F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 834 KDQIDRDSTIDDFKAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 893
Query: 219 KRN-GRCVILLTQGREAHN------FQTSMQTCKSYVEKIIN 253
N G V LT+ +E ++ + S Q ++K++N
Sbjct: 894 AGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPIQKMVN 935
>gi|115491279|ref|XP_001210267.1| hypothetical protein ATEG_00181 [Aspergillus terreus NIH2624]
gi|121743211|sp|Q0D1K3.1|PRP5_ASPTN RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|114197127|gb|EAU38827.1| hypothetical protein ATEG_00181 [Aspergillus terreus NIH2624]
Length = 1181
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + +++ E + +IF + E D L E M K + G
Sbjct: 782 KFVRLLELLGNLY--SSDENEDARALIFVERQ----EAADTLL-RELMRKGYPCMSIHGG 834
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ ++ F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 835 KDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 894
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIINN 254
N G V LT+ +E A + S Q V++++++
Sbjct: 895 AGNTGTAVTFLTEDQERFSVDIAKALKQSGQKVPEPVQQMVDS 937
>gi|403258897|ref|XP_003921978.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Saimiri boliviensis boliviensis]
Length = 1025
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E+ + IIF R + I + K E VKA +
Sbjct: 700 KLTKLRNTIMEQYTRTE----ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 755
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI + + I
Sbjct: 756 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNVVIRYGLVTNEIA 815
Query: 209 MVQRLGRT 216
MVQ GR
Sbjct: 816 MVQARGRA 823
>gi|441677777|ref|XP_004092765.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX58 [Nomascus leucogenys]
Length = 609
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 39/189 (20%)
Query: 46 GLRSFYNNLVEVSKEDGSCP---ILGKDNDLQNLLQQLK------PKLDINIMSSEYAWS 96
L+ FY+ V+K C +L +D +N+L L PKL++
Sbjct: 236 ALQDFYHR-EHVTKTQILCAERRLLALFDDHKNVLAHLATHGPENPKLEV---------- 284
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM----VKASMF 152
L +IL+ FR ++ + IIF R + L+ + ++A +
Sbjct: 285 ------LEKILQRQFR----SSDSPRGIIFTRTRQSTHSLLLWLQQQPGLKTLDIRAQLL 334
Query: 153 VG-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
+G QS+ +TQ++Q+E++ KFR G N L+ATSV EEGLDI ++V+ + + I
Sbjct: 335 IGAGNSSQSTHMTQRDQQEVIWKFRNGTLNLLVATSVAEEGLDIPHCNVVVRYGLLTNEI 394
Query: 208 KMVQRLGRT 216
MVQ GR
Sbjct: 395 SMVQARGRA 403
>gi|281422527|ref|ZP_06253526.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Prevotella copri
DSM 18205]
gi|281403351|gb|EFB34031.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Prevotella copri
DSM 18205]
Length = 568
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 118 GETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFN 177
G+ +VI+F+ + V ++ L+ + A S + Q E+ ++M KF++G+++
Sbjct: 243 GDLKRVIVFSGSKFKVKQLAASLQQIGVNCGA-----MHSDLEQAERDDVMFKFKSGQYD 297
Query: 178 TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCVILLTQGREAHN 236
L+AT + G+DI +I++VI +D V R+GRT R R+GR + +++
Sbjct: 298 VLVATDIVARGIDIDDIEMVINYDVPHDTEDYVHRIGRTARANRDGRAITFVSE-----E 352
Query: 237 FQTSMQTCKSYVEKIINNKSIYANLAKNGPRMI 269
Q Q + ++EK+++ + + GP I
Sbjct: 353 DQYWFQQIEKFLEKVVDKMPLPEGCGE-GPEYI 384
>gi|104782944|ref|YP_609442.1| DEAD/DEAH box helicase [Pseudomonas entomophila L48]
gi|95111931|emb|CAK16656.1| putative ATP-dependent RNA helicase, DEAD box family [Pseudomonas
entomophila L48]
Length = 454
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K IIF N R + I+ L E VKA + G+ Q+++K + +F+ G L+A
Sbjct: 258 KAIIFTNTRALADRIYGHLVAKE--VKAFVLHGEKD---QKDRKLAIDRFKDGGSKVLVA 312
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN-GRCVILLTQGREAHNFQTS 240
T V GLDI +DLVI FD +S + V R+GRTGR G + L+T HN
Sbjct: 313 TDVAARGLDIDGLDLVINFDMPRSGDEYVHRIGRTGRAGGEGLAISLIT-----HNDWNL 367
Query: 241 MQTCKSYVEKIINNKSI 257
M + + Y+++ + I
Sbjct: 368 MSSIERYLKQQFERRVI 384
>gi|399523842|ref|ZP_10764443.1| DEAD/DEAH box helicase [Atopobium sp. ICM58]
gi|398375104|gb|EJN52568.1| DEAD/DEAH box helicase [Atopobium sp. ICM58]
Length = 722
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFR 172
+ A + E I+F R V E+ LE + G S V Q E++ ++++ +
Sbjct: 288 IAAGQEEADAAIVFVRTRADVEEV-----SLELSGRGFRAAGISGDVAQTERERMVERLK 342
Query: 173 AGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLT 229
G + L+AT V GLD+ I LV+ FD + P V R+GRTGR R GR + T
Sbjct: 343 NGSLDVLVATDVAARGLDVERISLVVNFDVPREPEAYVHRIGRTGRAGREGRALTFFT 400
>gi|194224905|ref|XP_001497895.2| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Equus
caballus]
Length = 920
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 37/221 (16%)
Query: 47 LRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLRE 105
L+ F+NN+ G D Q+L ++ + KL ++ +S + + + K L
Sbjct: 562 LKDFFNNVRAA----------GFDETEQDLTRRFEEKLPELESVSMDPSNENPKLKDLCF 611
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK------PLEPMVKASMFVGQ---- 155
IL+ + L+ E T+ I+F R +V D LK P +K + G+
Sbjct: 612 ILQEEYHLNPE----TRTILFVKTRALV----DALKKWIEENPKLSFLKPGILTGRGKTT 663
Query: 156 -SSGVTQQEQKEIMKKFRA-GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
++G+T QK + FR G+ LIATSV +EG+DI + +LVI ++ + IKM+Q
Sbjct: 664 NNTGMTLPAQKCALDAFRTNGDNKILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTR 723
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINN 254
GR GR + +C +L + + +M Y EK++N+
Sbjct: 724 GR-GRAKGSKCFLLTSNADVIEKEKMNM-----YKEKMMND 758
>gi|268536796|ref|XP_002633533.1| C. briggsae CBR-DRH-1 protein [Caenorhabditis briggsae]
Length = 1043
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 13/124 (10%)
Query: 116 EKGETTKVIIFANYR---VVVAEIFDVLKPLEPM-VKASMFVG-----QSSG---VTQQE 163
E+ ++ IIF R ++ EI + + LE + +K+ G SS ++Q+
Sbjct: 701 EQRGDSRSIIFVRTRYEATILNEILNKRETLERLGIKSEWISGLNKSTSSSADISASKQK 760
Query: 164 QKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGR 223
Q E ++KF GE L+ATSV EEGLD+ E +LVI ++ + I VQR GR GR N
Sbjct: 761 QMEKLRKFATGEIRVLVATSVAEEGLDVAECNLVIKYNYATNEIAHVQRRGR-GRAMNST 819
Query: 224 CVIL 227
CV++
Sbjct: 820 CVLV 823
>gi|260817577|ref|XP_002603662.1| hypothetical protein BRAFLDRAFT_235564 [Branchiostoma floridae]
gi|229288984|gb|EEN59673.1| hypothetical protein BRAFLDRAFT_235564 [Branchiostoma floridae]
Length = 701
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 69 KDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLR--------EILESHFRLHAEKGET 120
K++D Q+ + KL +Y++ HL+ + + E L+ + E E
Sbjct: 324 KESDRQDGFDETDRKLASIFSGRQYSFFHLEKLTKKSQYENPNLEALKEKLKQECEAKEG 383
Query: 121 TKVIIFANYRVVVAEIFDVLK---PLEPMVKASMFVGQSSG-------VTQQEQKEIMKK 170
+ I++ R A + ++ L +++A G +G +T +Q+E++++
Sbjct: 384 ARGILYTKTRQSTAFLLSWIRNTPELNNLLRADQLTGTGTGSISKNNHMTPIKQREVIRQ 443
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
FR GE N LIAT+V EEGLDI E + VI + + I M+Q GR
Sbjct: 444 FREGELNLLIATTVAEEGLDIKECNFVIRYGLVTNEIAMMQASGRA 489
>gi|326482407|gb|EGE06417.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
equinum CBS 127.97]
Length = 1182
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + ++ E + ++F + + + L M K + G
Sbjct: 781 KFVRLLELLGNLY--SDDENEDARTLVFVDRQEAADRLLRDL-----MRKGYPCMSIHGG 833
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ + F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 834 KDQIDRDSTIDDFKAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 893
Query: 219 KRN-GRCVILLTQGREAHN------FQTSMQTCKSYVEKIIN 253
N G V LT+ +E ++ + S Q ++K++N
Sbjct: 894 AGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPIQKMVN 935
>gi|327292871|ref|XP_003231133.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
rubrum CBS 118892]
gi|326466763|gb|EGD92216.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
rubrum CBS 118892]
Length = 1180
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + ++ E + ++F + + + L M K + G
Sbjct: 780 KFVRLLELLGNLY--SDDENEDARTLVFVDRQEAADRLLRDL-----MRKGYPCMSIHGG 832
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ + F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 833 KDQIDRDSTIDDFKAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 892
Query: 219 KRN-GRCVILLTQGREAHN------FQTSMQTCKSYVEKIIN 253
N G V LT+ +E ++ + S Q ++K++N
Sbjct: 893 AGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPIQKMVN 934
>gi|251764670|sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 4; AltName:
Full=Dicer-like protein 4; Short=OsDCL4; AltName:
Full=Protein SHOOT ORGANIZATION 1
gi|152926631|gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group]
Length = 1657
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQSSG---VTQQEQKEIMKKFRA 173
E K I+F V I ++L+ L+ + K VG SG +++ + I+++F +
Sbjct: 416 ENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSKNMSRNKMDAIVQRFSS 475
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
GE N L+ATSVGEEGLDI LV+ FD ++ +Q GR R + V+LL + +
Sbjct: 476 GEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGR-ARMTKSKYVVLLERENQ 534
Query: 234 AH 235
+H
Sbjct: 535 SH 536
>gi|353251997|pdb|4A2P|A Chain A, Structure Of Duck Rig-I Helicase Domain
gi|353252013|pdb|4A36|A Chain A, Structure Of Duck Rig-I Helicase Domain Bound To 19-Mer
Dsrna And Atp Transition State Analogue
gi|353252014|pdb|4A36|B Chain B, Structure Of Duck Rig-I Helicase Domain Bound To 19-Mer
Dsrna And Atp Transition State Analogue
Length = 556
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 85/156 (54%), Gaps = 18/156 (11%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSG 158
IL+ +R + + T+ ++FA R +V+ + ++ P+ +K + +G Q++G
Sbjct: 380 ILDDAYRYNPQ----TRTLLFAKTRALVSALKKCMEENPILNYIKPGVLMGRGRRDQTTG 435
Query: 159 VTQQEQKEIMKKFRAGEFN-TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
+T QK ++ F+ + N LIATSV +EG+DI + +LV+ ++ + KM+Q GR G
Sbjct: 436 MTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGR-G 494
Query: 218 RKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIIN 253
R +C+++ ++ N + C Y E+++N
Sbjct: 495 RAAGSKCILVTSKTEVVEN-----EKCNRYKEEMMN 525
>gi|212537171|ref|XP_002148741.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
gi|210068483|gb|EEA22574.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
Length = 1431
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 13/119 (10%)
Query: 122 KVIIFANYRVVVAEIFDVLK--PLEPMVKASMFVGQS------SGVTQ----QEQKEIMK 169
+VI+F R V + +L PL + F+G S S +T+ +Q++++
Sbjct: 397 RVIVFVEQRATVIMLAHLLSVHPLTKEIVTKYFLGNSNYANRKSAITELSTLSDQRDVLA 456
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
+ R G+ N LIAT+V EEG+D+ ++VICFD K +QR GR R R R V+ +
Sbjct: 457 ELRVGKTNILIATNVLEEGIDVPACNMVICFDPPKDLRSFIQRRGR-ARDRLSRLVLFM 514
>gi|312962372|ref|ZP_07776863.1| ATP-dependent RNA helicase SrmB [Pseudomonas fluorescens WH6]
gi|311283299|gb|EFQ61889.1| ATP-dependent RNA helicase SrmB [Pseudomonas fluorescens WH6]
Length = 292
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K I+F N R I+ L E KA + G+ Q+++K + + +AG L+A
Sbjct: 89 KAIVFTNTRAAADRIYGRLVAQE--YKAFVLHGEKD---QKDRKLAIDRLKAGGVKILVA 143
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
T V GLD+ +DLVI FD +S + V R+GRTGR N I L H M
Sbjct: 144 TDVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLI----CHGDWNLM 199
Query: 242 QTCKSYVEKIINNKSI 257
+ + Y+++ ++I
Sbjct: 200 SSIERYLKQSFERRTI 215
>gi|397590755|gb|EJK55144.1| hypothetical protein THAOC_25148 [Thalassiosira oceanica]
Length = 666
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFR- 172
HAE+ KVIIF V VL+ L P K F + Q+ +++ M +FR
Sbjct: 286 HAEE----KVIIFFLTCACVEYYSTVLQKLRPPAKGYAFESLHGKLVQKRREKAMGRFRE 341
Query: 173 AGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLTQG 231
+ + L+ T V GLD+ +ID I FDA P V R+GR+ R R+G ++ LT+
Sbjct: 342 SSNGSALLCTDVAARGLDLPDIDWTIQFDAPVDPSSYVHRVGRSARAGRSGNSLVFLTRK 401
Query: 232 REAH 235
EA+
Sbjct: 402 EEAY 405
>gi|328865213|gb|EGG13599.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 760
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 14/146 (9%)
Query: 105 EILESHFRLHAE--KGETTKVIIFANYRVVVAEIFDVLKPLE------PMVKASMFVGQS 156
EILE H LH + + I+F R ++ ++L + K VG
Sbjct: 502 EILEEHNALHQADPSKDQFRAILFVKTRDSAHQLGEILNNISNKSTRYSFTKCVTVVGHG 561
Query: 157 S----GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
S G++ +QKE+++ FR G+ N ++ T+V EEGLD+ E +LVI DA + ++Q
Sbjct: 562 SNTDGGMSTSKQKEVVEAFRTGKANVVVTTNVLEEGLDVPECNLVIRIDAPSTVTALIQS 621
Query: 213 LGRTGRKRNGRCVILLTQGREAHNFQ 238
GR R RN V ++ + E H+++
Sbjct: 622 RGR-ARHRNSEFVAII-KTIEGHSYR 645
>gi|440784133|ref|ZP_20961554.1| ATP-dependent RNA helicase [Clostridium pasteurianum DSM 525]
gi|440219169|gb|ELP58384.1| ATP-dependent RNA helicase [Clostridium pasteurianum DSM 525]
Length = 479
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 124 IIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATS 183
IIF N R V +F++LK + + G+ Q+E+ E +++F GEF LIAT
Sbjct: 244 IIFCNTRNNVDTLFNLLKD-----RGFSCISIHGGMLQEERLEAIRRFSRGEFTFLIATD 298
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCVILLT 229
+ G+DI +I VI +D V R+GRTGR + NG+ + LT
Sbjct: 299 IASRGIDIADITHVINYDMPFEKENYVHRIGRTGRAESNGKAISFLT 345
>gi|393238576|gb|EJD46112.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1427
Score = 65.5 bits (158), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQSS-------GVTQQEQKEIMK 169
E K +IF + + + ++L L + V + +G S+ G+ ++Q E++K
Sbjct: 380 EHFKCVIFVEQKHIAMTLAELLPRLSELDWVSPAALIGHSTTGETDIGGMDSKQQAEVVK 439
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
FRA ++N L+ATSV EEGLD LVI FD ++ I VQ GR R N V+LL
Sbjct: 440 GFRASKYNVLLATSVAEEGLDFQACHLVIRFDGLQNLISYVQSRGR-ARHANSTYVVLL 497
>gi|363992266|gb|AEW46678.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Pteropus alecto]
Length = 929
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 22/173 (12%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L ++ + KL ++ +S + + + K L +L+ + L+ E T+ I+F
Sbjct: 582 GFDETEQDLTRRFEEKLQELESISMDPSNENPKLKDLCFVLQEEYHLNPE----TRTILF 637
Query: 127 ANYRVVVAEIFDVLK------PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFR-AG 174
R +V D LK P +K + G Q+ G+T QK+++ F+ +G
Sbjct: 638 VKTRALV----DALKKWIEENPKLSFLKPGISTGRGRTKQNIGMTLPAQKDVLHTFKTSG 693
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
+ LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L
Sbjct: 694 DNKILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLL 745
>gi|351699900|gb|EHB02819.1| Putative ATP-dependent RNA helicase DHX58 [Heterocephalus glaber]
Length = 678
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 147 VKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFD 201
++A M +G Q + +TQ++Q+E+++KFR G N L+ATSV EEGLDI + +V+ +
Sbjct: 398 IRAQMLIGAGNSSQCTHMTQRDQQEVIRKFRVGTLNLLVATSVAEEGLDIAKCSVVVRYG 457
Query: 202 AQKSPIKMVQRLGRT 216
+ I MVQ GR
Sbjct: 458 LLTNEISMVQARGRA 472
>gi|160915730|ref|ZP_02077938.1| hypothetical protein EUBDOL_01739 [Eubacterium dolichum DSM 3991]
gi|158432206|gb|EDP10495.1| DEAD/DEAH box helicase [Eubacterium dolichum DSM 3991]
Length = 572
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 124 IIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATS 183
+IFAN + +V E+ L + +KA G + Q+ + +M++FR+G LIAT
Sbjct: 247 MIFANTKKMVDELQGELNKHD--IKACALHGD---MKQEFRSRVMEQFRSGSMPILIATD 301
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLTQGREAHNFQTSMQ 242
V G+D+ ++DLVI FD + + R+GRTGR + G + L++ GR+ + M+
Sbjct: 302 VAARGIDVDDVDLVINFDIPQDNEYYIHRIGRTGRAGKKGLAITLISGGRQRSELKNIMR 361
Query: 243 TCKSYV 248
K+ +
Sbjct: 362 YTKTNI 367
>gi|429334948|ref|ZP_19215595.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida CSV86]
gi|428760355|gb|EKX82622.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida CSV86]
Length = 439
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K IIF N RV+ I+ L + VKA + G Q+++K +++F+ G L+A
Sbjct: 245 KAIIFTNTRVMADRIYGHLVAKD--VKAFVLHGDKD---QKDRKLAIERFKTGNAKVLVA 299
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLTQG 231
T V GLD+ +DLVI FD +S + V R+GRTGR +G V L+ G
Sbjct: 300 TDVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGADGLAVSLICHG 350
>gi|156032684|ref|XP_001585179.1| hypothetical protein SS1G_13747 [Sclerotinia sclerotiorum 1980]
gi|154699150|gb|EDN98888.1| hypothetical protein SS1G_13747 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1867
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 18/147 (12%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRV---VVAEIFDVLKPLEPMVKASMFVGQ 155
K + L IL+ F ++ K I+F R ++A + + P +K + VG
Sbjct: 761 KVVALLSILKDRF----QRPTNDKCIVFVRERYTARLLASLLSTPEAGTPFLKVAPLVGT 816
Query: 156 SSG------VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+S +T + Q M FR G+ N LIATSV EEGLDI + +LV+ FD + I+
Sbjct: 817 TSTSAGEMHITFRSQTLTMHDFRNGKINCLIATSVAEEGLDIPDCNLVVRFDLYSTVIQY 876
Query: 210 VQRLGRTGRKRNGRCVILLTQGREAHN 236
+Q GR R N R ++ E+HN
Sbjct: 877 IQSRGR-ARHVNSRYYHMV----ESHN 898
>gi|349806885|gb|AEQ19569.1| VASA-like protein [Macrobrachium nipponense]
Length = 601
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 22/141 (15%)
Query: 104 REILESHFR--LHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVT- 160
++IL H L AE G K+++F K + + A + Q S T
Sbjct: 393 KDILYEHIGELLSAEDG--MKILVFVE-----------TKKMADFIGAFLCNNQISATTI 439
Query: 161 -----QQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGR 215
QQ+++E +K FR G+F+ L+AT+V GLDI I VI FD K + V R+GR
Sbjct: 440 HGDRHQQQREEALKTFRNGKFDVLVATAVAARGLDIPGIGCVINFDLPKEVDEYVHRIGR 499
Query: 216 TGRKRN-GRCVILLTQGREAH 235
TGR N GR + +G +H
Sbjct: 500 TGRVGNCGRAISFFDRGVVSH 520
>gi|395844909|ref|XP_003795191.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Otolemur garnettii]
Length = 1024
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 119 ETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEIMK 169
E+ + IIF R + I + K E VKA +G +TQ EQKE++
Sbjct: 716 ESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVIS 775
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
KFR G+ N LIAT+V EEGLDI E ++VI + + I MVQ GR
Sbjct: 776 KFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRA 822
>gi|351713047|gb|EHB15966.1| Putative ATP-dependent RNA helicase DDX58 [Heterocephalus glaber]
Length = 925
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 47 LRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREI 106
L+ F+NN+ + ++ + DL ++ P+L+ M LK + L I
Sbjct: 568 LKDFFNNVRAAAFDE-------IEQDLTRRFEEKLPELENVSMDPSNENPKLKDLHL--I 618
Query: 107 LESHFRLHAEKGETTKVIIFANYRVVVAEI---------FDVLKPLEPMVKASMFVGQSS 157
L+ + ++ + T+ I+F R +V + + LKP ++ +
Sbjct: 619 LQEEYHVNPK----TRTILFVKTRALVDALKKWIEENSALNFLKP--GILTGRGRTSNKT 672
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
G+T QK ++ FRA N LIATSV +EG+DI + +LVI ++ + IKM+Q GR G
Sbjct: 673 GMTLPAQKCVLDSFRANGDNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQSRGR-G 731
Query: 218 RKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINN 254
R + +C +L + T++ Y EK++N+
Sbjct: 732 RAKGSKCYLLSSNADVIEKENTNL-----YKEKMMND 763
>gi|213513760|ref|NP_001133649.1| probable ATP-dependent RNA helicase DHX58 [Salmo salar]
gi|209154816|gb|ACI33640.1| Probable ATP-dependent RNA helicase DHX58 [Salmo salar]
Length = 678
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 13/178 (7%)
Query: 63 SCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTK 122
S + G D L L Q+ ++++ +S + + + K +L+ L F ++G+ ++
Sbjct: 320 STAMDGTDFFLLGLYQE--NEVELRKLSGDARFENPKMGKLQNTLLEQF----DQGKPSR 373
Query: 123 VIIFANYRVVVAEIFDVLKPLEPM----VKASMFVGQSSGV---TQQEQKEIMKKFRAGE 175
I+F+ R ++D + + ++A++ G +G+ TQ EQKE ++ FR G
Sbjct: 374 GILFSKTRKSTHCLYDWVSNNPALQRAGIRAAILTGAGNGINYMTQNEQKETIRTFRRGS 433
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
N LI+TSV EEGLDI E +LV+ + + I Q GR + V+ GRE
Sbjct: 434 LNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARASDSVYSVVAQAGGRE 491
>gi|366166094|ref|ZP_09465849.1| DEAD/DEAH box helicase domain-containing protein [Acetivibrio
cellulolyticus CD2]
Length = 481
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 124 IIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATS 183
IIF + ++ E+FD L L + G+ Q ++ +M F+ G F L+AT
Sbjct: 246 IIFCSTKIKTDELFDELAKLNYTCEKI-----HGGMEQSDRLRVMNDFKQGYFRYLVATD 300
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCVILLT 229
V G+DI +I LVI +D + V R+GRTGR RNG+ + +T
Sbjct: 301 VAARGIDIDDISLVINYDIPQDKESYVHRIGRTGRVDRNGKAITFVT 347
>gi|431894856|gb|ELK04649.1| Interferon-induced helicase C domain-containing protein 1 [Pteropus
alecto]
Length = 932
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
Query: 99 KFIRLRE-ILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFV 153
K +LR I+E + R E + IIF R + I + K E VKA +
Sbjct: 606 KLTKLRNTIMEQYTR----TAEAARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLI 661
Query: 154 GQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIK 208
G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E +++I + + I
Sbjct: 662 GAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIIIRYGLVTNEIA 721
Query: 209 MVQRLGRTGRKRNGRCVILLTQG 231
M+Q GR R V++ G
Sbjct: 722 MIQARGR-ARADESTYVLVACSG 743
>gi|380805141|gb|AFE74446.1| interferon-induced helicase C domain-containing protein 1, partial
[Macaca mulatta]
Length = 278
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 141 KPLEPMVKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEID 195
K E VKA +G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E +
Sbjct: 23 KFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECN 82
Query: 196 LVICFDAQKSPIKMVQRLGRT 216
+VI + + I MVQ GR
Sbjct: 83 IVIRYGLVTNEIAMVQARGRA 103
>gi|294868682|ref|XP_002765642.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239865721|gb|EEQ98359.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 367
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
+TQ + + +FRAG + L+AT V GLDI +D+VI FD K+P + + R+GRT R
Sbjct: 234 MTQTHRLGALNQFRAGTRSILVATDVAARGLDIPSVDVVINFDVPKNPEEYIHRVGRTAR 293
Query: 219 K-RNGRCVILLTQ 230
R GR V L+TQ
Sbjct: 294 AGRTGRSVTLVTQ 306
>gi|219847371|ref|YP_002461804.1| DEAD/DEAH box helicase [Chloroflexus aggregans DSM 9485]
gi|219541630|gb|ACL23368.1| DEAD/DEAH box helicase domain protein [Chloroflexus aggregans DSM
9485]
Length = 550
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
++Q + +M++FR G+ + L+AT V GLDI E+ VI +D P V R+GRTGR
Sbjct: 273 LSQAVRDRVMRRFREGQLDVLVATDVAARGLDIAEVSHVINYDVPTDPESYVHRIGRTGR 332
Query: 219 KRNGRCVILLTQGREAHNFQTSMQTCKSYVEK 250
I RE QT + ++ +E+
Sbjct: 333 AGRAGVAITFITPRERRMLQTIERVTRTRIER 364
>gi|397529815|gb|AFO53518.1| dicer-like protein 4 [Solanum lycopersicum]
Length = 1620
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQS 156
K +RL IL S+F + + K I+F N V + +L+ L+ + K VG
Sbjct: 385 KLLRLIGIL-SNFGVQPD----MKCIVFVNRIVTARSLSYILQHLKILSSWKCGFLVGVH 439
Query: 157 SGVTQQEQKE---IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
SG+ +K I+ KFR+GE N LIAT VGEEGLDI LVI FD ++ +Q
Sbjct: 440 SGLKSMSRKNTNIILDKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 499
Query: 214 GRT 216
GR
Sbjct: 500 GRA 502
>gi|281205109|gb|EFA79302.1| hypothetical protein PPL_07720 [Polysphondylium pallidum PN500]
Length = 3481
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKP--LEPMVKASMFVGQ---SS 157
L EI+E + ++ IIF + V+ + LK + A +G
Sbjct: 614 LEEIIEQNL------NDSLSAIIFVQTKTTVSSVLRALKKKHFNSFLHAKKLIGHYMADG 667
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
G+ +EQ+EI+ KF+ E L+ATSV EEG+DI +L+ICFD ++QR GR
Sbjct: 668 GMDLEEQQEILAKFKDNECRLLVATSVLEEGIDIPACNLIICFDDDLQLRSLIQRRGR-A 726
Query: 218 RKRNGRCVIL 227
R N + +
Sbjct: 727 RSANSKFYVF 736
>gi|401840618|gb|EJT43365.1| DBP8-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 437
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFD-VLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKF 171
L E+ E IIF N R + AEI LK LE V AS+ S + QQE+ + +F
Sbjct: 253 LTCEEYENKTAIIFVN-RTMTAEILRRTLKQLEVRV-ASLH----SQMPQQERTNSLHRF 306
Query: 172 RAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLTQ 230
RA LIAT V GLDI ++LV+ +D P + R GRT R RNG + +TQ
Sbjct: 307 RANAARVLIATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRNGDAISFVTQ 366
>gi|334187796|ref|NP_001190348.1| dicer-like protein 4 [Arabidopsis thaliana]
gi|332005448|gb|AED92831.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1688
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 13/141 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFD-VLKPLEPM--VKASMFVGQ 155
K ++L +IL S FRL K IIF N R+V A +L LE + K+ VG
Sbjct: 458 KLVQLIKIL-SVFRLEPH----MKCIIFVN-RIVTARTLSCILNNLELLRSWKSDFLVGL 511
Query: 156 SSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
SSG+ +++ + I+K+F++ E N L+AT VGEEGLDI LVI +D ++ +Q
Sbjct: 512 SSGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQS 571
Query: 213 LGRTGRKRNGRCVILLTQGRE 233
GR R L+ G E
Sbjct: 572 RGR-ARMPQSEYAFLVDSGNE 591
>gi|452979125|gb|EME78888.1| hypothetical protein MYCFIDRAFT_43585 [Pseudocercospora fijiensis
CIRAD86]
Length = 1516
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 19/139 (13%)
Query: 111 FRLHAEKGE---TTKVIIFANYRV---VVAEIFDVLKPLEPMVKASMFVGQSSGVTQQE- 163
+R AE+ E + + I+F + R ++ +F +K P +K++ +G SG T Q+
Sbjct: 403 YRYLAEQFERPSSNRCIVFVDKRYTARLLNSLFQRIK--SPHMKSTFLIG--SGNTGQDE 458
Query: 164 -------QKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
Q ++ KFR G+ N L ATSV EEGLD+ + +L+I FD + I+ VQ GR
Sbjct: 459 DNFSFRQQVMVLLKFRKGDLNCLFATSVAEEGLDVPDCNLIIRFDMYATMIQYVQSRGR- 517
Query: 217 GRKRNGRCVILLTQGREAH 235
R +N + + ++ G H
Sbjct: 518 ARNQNSKFIHMVENGNSIH 536
>gi|145358264|ref|NP_197532.3| dicer-like protein 4 [Arabidopsis thaliana]
gi|322510021|sp|P84634.2|DCL4_ARATH RecName: Full=Dicer-like protein 4
gi|73672051|gb|AAZ80387.1| dicer-like 4 [Arabidopsis thaliana]
gi|332005447|gb|AED92830.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1702
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 13/141 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFD-VLKPLEPM--VKASMFVGQ 155
K ++L +IL S FRL K IIF N R+V A +L LE + K+ VG
Sbjct: 472 KLVQLIKIL-SVFRLEPH----MKCIIFVN-RIVTARTLSCILNNLELLRSWKSDFLVGL 525
Query: 156 SSGV---TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
SSG+ +++ + I+K+F++ E N L+AT VGEEGLDI LVI +D ++ +Q
Sbjct: 526 SSGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQS 585
Query: 213 LGRTGRKRNGRCVILLTQGRE 233
GR R L+ G E
Sbjct: 586 RGR-ARMPQSEYAFLVDSGNE 605
>gi|294942246|ref|XP_002783449.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239895904|gb|EER15245.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
+TQ + + +FRAG + L+AT V GLDI +D+VI FD K+P + + R+GRT R
Sbjct: 305 MTQTHRLGALNQFRAGTRSVLVATDVAARGLDIPSVDVVINFDVPKNPEEYIHRVGRTAR 364
Query: 219 K-RNGRCVILLTQ 230
R GR V L+TQ
Sbjct: 365 AGRTGRSVTLVTQ 377
>gi|365760297|gb|EHN02027.1| Dbp8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 437
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFD-VLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKF 171
L E+ E IIF N R + AEI LK LE V AS+ S + QQE+ + +F
Sbjct: 253 LTCEEYENKTAIIFVN-RTMTAEILRRTLKQLEVRV-ASLH----SQMPQQERTNSLHRF 306
Query: 172 RAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLTQ 230
RA LIAT V GLDI ++LV+ +D P + R GRT R RNG + +TQ
Sbjct: 307 RANAARVLIATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRNGDAISFVTQ 366
>gi|334337081|ref|YP_004542233.1| DEAD/DEAH box helicase [Isoptericola variabilis 225]
gi|334107449|gb|AEG44339.1| DEAD/DEAH box helicase domain protein [Isoptericola variabilis 225]
Length = 607
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 124 IIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATS 183
I+F R E+ L +E + AS G V Q+E++ I+++ R+G + L+AT
Sbjct: 259 IVFTRTRAAAEEVGAAL--VERGISASTISGD---VAQKERERIVERLRSGALDVLVATD 313
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLT 229
V GLD+ I LV+ FD + V R+GRTGR R G+ + +T
Sbjct: 314 VAARGLDVDRIGLVVNFDIPREAEAYVHRIGRTGRAGRTGKALSFVT 360
>gi|294911908|ref|XP_002778095.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239886216|gb|EER09890.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
+TQ + + +FRAG + L+AT V GLDI +D+VI FD K+P + + R+GRT R
Sbjct: 305 MTQTHRLGALNQFRAGTRSVLVATDVAARGLDIPSVDVVINFDVPKNPEEYIHRVGRTAR 364
Query: 219 K-RNGRCVILLTQ 230
R GR V L+TQ
Sbjct: 365 AGRTGRSVTLVTQ 377
>gi|344268047|ref|XP_003405875.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Loxodonta africana]
Length = 1025
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 147 VKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFD 201
VKA +G + + +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI +
Sbjct: 749 VKAHHLIGAGHSSEFTHMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYG 808
Query: 202 AQKSPIKMVQRLGRT 216
+ I MVQ GR
Sbjct: 809 LVTNEIAMVQARGRA 823
>gi|294918786|ref|XP_002778488.1| DEAD box protein, putative [Perkinsus marinus ATCC 50983]
gi|239886923|gb|EER10283.1| DEAD box protein, putative [Perkinsus marinus ATCC 50983]
Length = 213
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
+TQ + + +FRAG + L+AT V GLDI +D+VI FD K+P + + R+GRT R
Sbjct: 55 MTQTHRLGALNQFRAGTRSILVATDVAARGLDIPSVDVVINFDVPKNPEEYIHRVGRTAR 114
Query: 219 K-RNGRCVILLTQ 230
R GR V L+TQ
Sbjct: 115 AGRTGRSVTLVTQ 127
>gi|323140806|ref|ZP_08075722.1| DEAD-box ATP-dependent RNA helicase CshA [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414722|gb|EFY05525.1| DEAD-box ATP-dependent RNA helicase CshA [Phascolarctobacterium
succinatutens YIT 12067]
Length = 529
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%)
Query: 148 KASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPI 207
+ M G ++Q ++ +MKKFR G + LIAT V G+D+ I VI FD + P
Sbjct: 264 RGYMAEGLHGDLSQNQRDRVMKKFREGAVDVLIATDVAARGIDVDNITHVINFDIPQDPE 323
Query: 208 KMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEK 250
V R+GRTGR N + RE + +T K+ +++
Sbjct: 324 SYVHRIGRTGRAGNTGVAMTFITPREFRQLKLIERTVKTKIQR 366
>gi|400598379|gb|EJP66096.1| RNase3 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1402
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 168 MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
++ FR GE N L+ATSV EEG+DI +LVICFD+ K+P +QR GR R ++ + +I
Sbjct: 453 LQDFRRGEVNLLVATSVLEEGIDIPACNLVICFDSPKNPKSFIQRRGR-ARMQDSQLIIF 511
Query: 228 LTQG 231
QG
Sbjct: 512 THQG 515
>gi|327272183|ref|XP_003220865.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like [Anolis
carolinensis]
Length = 680
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 79/148 (53%), Gaps = 14/148 (9%)
Query: 89 MSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKP----LE 144
++ + ++ + K +L+++L+ F ++ ++++ I+F R + L+ E
Sbjct: 341 LAEDKSYENPKLEKLQQVLQDQF----QELKSSRGIVFTRTRQSAHSLHQWLQDNRALCE 396
Query: 145 PMVKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVIC 199
+KA++ G Q +TQQEQ+ +++ FR G N L +TSV EEGLD+ E ++V+
Sbjct: 397 LGIKAAVLTGAGYSNQIKHMTQQEQQNVIQNFRKGALNLLFSTSVAEEGLDVPECNIVVR 456
Query: 200 FDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
+ + I M+Q GR R N C +L
Sbjct: 457 YGLMTNEIAMMQARGR-ARAPNSICSVL 483
>gi|154280893|ref|XP_001541259.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411438|gb|EDN06826.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 503
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 99 KFIRLREILESHFRLHAE-KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS 157
KF+RL +L L+A+ K E + +IF + + + L M K +
Sbjct: 104 KFVRLLALLGE---LYADDKNEDARALIFVDRQEAADGLLRDL-----MHKGYPCMSIHG 155
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
G Q ++ + F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTG
Sbjct: 156 GKDQVDRDSTIDDFKAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTG 215
Query: 218 RKRN-GRCVILLTQGREAHN------FQTSMQTCKSYVEKIINN 254
R N G V LT+ +E ++ + S Q V+K++N+
Sbjct: 216 RAGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPVQKLVNS 259
>gi|449295521|gb|EMC91542.1| hypothetical protein BAUCODRAFT_570103 [Baudoinia compniacensis
UAMH 10762]
Length = 1569
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSS 157
K + L+ L F E + + I+F R + K P ++ VG ++
Sbjct: 442 KVLGLKRFLAPEF----ETPSSRRCIVFVERRHTARLLSATFKRFGVPNLRPGFLVGANN 497
Query: 158 ------GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQ 211
T Q M KFR+GE N L T+V EEGLDI + +LVI FD ++ I+ VQ
Sbjct: 498 PEMDEDNFTTPMQVLTMAKFRSGEINCLFCTTVAEEGLDIPDCNLVIRFDMYRTMIQYVQ 557
Query: 212 RLGRTGRKRNGRCVILLTQGREAH-----NFQTSMQTCKSYVEKIINNKSIYAN 260
GR R+RN + + ++ +G H + + + + + + N+ +Y N
Sbjct: 558 SRGR-ARQRNSKFLHMVEKGNSVHAELLLQVRAQERAMRRFCQLLPENRRLYGN 610
>gi|354485032|ref|XP_003504688.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Cricetulus
griseus]
Length = 679
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 147 VKASMFVG-----QSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFD 201
+KA M +G QS+ +TQ++Q+E++++FR G N L+ATSV EEGLDI + ++V+ +
Sbjct: 399 IKAQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGIVNLLVATSVAEEGLDIAQCNVVVRYG 458
Query: 202 AQKSPIKMVQRLGRT 216
+ I MVQ GR
Sbjct: 459 LLTNEISMVQARGRA 473
>gi|401827655|ref|XP_003888120.1| ATP-dependent rRNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392999320|gb|AFM99139.1| ATP-dependent rRNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 399
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
+ Q++++E M+ F+ +F+ L+ T VG GLDI +DLVI FD KS V R+GRT R
Sbjct: 273 LIQEKREETMRMFKENKFSILVCTDVGSRGLDISHVDLVINFDVPKSGKDYVHRVGRTAR 332
Query: 219 K-RNGRCVILLTQ 230
R+G + L+TQ
Sbjct: 333 AGRSGTAITLVTQ 345
>gi|426222380|ref|XP_004005372.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Ovis aries]
Length = 943
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 27/200 (13%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T+ I+F
Sbjct: 582 GFDAIEQDLTQRFEEKLVELEDISVDPSNENPKLKDLCFILQEEYHLNPE----TRTILF 637
Query: 127 ANYRVVVAEIFDVLK------PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRAG- 174
R +V D LK P ++K + G Q+ G+T QK + FR
Sbjct: 638 VKTRALV----DALKKWIEENPKLSLLKPCILTGRGRTNQTMGMTLPAQKCALDAFRTNR 693
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREA 234
+ LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L +
Sbjct: 694 DSKILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNADVI 752
Query: 235 HNFQTSMQTCKSYVEKIINN 254
Q + CK EK++N+
Sbjct: 753 EKEQ--LNICK---EKMMND 767
>gi|302502646|ref|XP_003013284.1| hypothetical protein ARB_00469 [Arthroderma benhamiae CBS 112371]
gi|291176847|gb|EFE32644.1| hypothetical protein ARB_00469 [Arthroderma benhamiae CBS 112371]
Length = 1181
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + ++ E + ++F + + + L M K + G
Sbjct: 758 KFVRLLELLGNLY--SDDENEDARTLVFVDRQEAADRLLRDL-----MRKGYPCMSIHGG 810
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ + F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 811 KDQIDRDSTIDDFKAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 870
Query: 219 KRN-GRCVILLTQGREAHN------FQTSMQTCKSYVEKIIN 253
N G V LT+ +E ++ + S Q ++K++N
Sbjct: 871 AGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPIQKMVN 912
>gi|88603077|ref|YP_503255.1| DEAD/DEAH box helicase-like protein [Methanospirillum hungatei
JF-1]
gi|88188539|gb|ABD41536.1| DEAD/DEAH box helicase-like protein [Methanospirillum hungatei
JF-1]
Length = 531
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 84 LDINIMSSEYAWSHLK--FIRLREILESHFRLHA-EKGETTKVIIFANYRVVVAEIFDVL 140
+D+ ++ E ++ +I +RE ++ + E + + IIF N ++ V + L
Sbjct: 204 IDVKMVHQELTVPQIEQYYIEVREPAKADTLIRVLEFYQPQRTIIFCNTQIAVDAVSSAL 263
Query: 141 KPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICF 200
K + + G G+ Q ++ ++M FR G+ LIAT V G+D+ EIDLV F
Sbjct: 264 K-----AEGFLADGLHGGMAQAQRDKVMNAFRKGQLEILIATDVAARGIDVEEIDLVCNF 318
Query: 201 DAQKSPIKMVQRLGRTGRK-RNGRCV 225
D + V R+GRT R R GR +
Sbjct: 319 DFPQDDEYYVHRIGRTARAGRTGRAI 344
>gi|74215044|dbj|BAE33508.1| unnamed protein product [Mus musculus]
Length = 733
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 20/127 (15%)
Query: 103 LREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK------PLEPMVKASMFVGQ- 155
L +L+ + L E TK I+F R +V D LK P +K + G+
Sbjct: 615 LYLVLQEEYHLKPE----TKTILFVKTRALV----DALKKWIEENPALSFLKPGILTGRG 666
Query: 156 ----SSGVTQQEQKEIMKKFRA-GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
++G+T QK +++ FRA G+ N LIATSV +EG+DI E +LVI ++ + IKM+
Sbjct: 667 RTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGTVIKMI 726
Query: 211 QRLGRTG 217
Q G +G
Sbjct: 727 QTRGESG 733
>gi|345308281|ref|XP_001509166.2| PREDICTED: probable ATP-dependent RNA helicase DDX58
[Ornithorhynchus anatinus]
Length = 781
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSG 158
+LE + L+ E ++ I+F R + + ++ P +K+ + +G Q++G
Sbjct: 473 LLEEEYHLNPE----SRTILFVKTRALANALKRWIEENPKLDYLKSDVLMGRGKRNQATG 528
Query: 159 VTQQEQKEIMKKFRA-GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
+T QK++++ F+A GE LIATSV +EG+DI + ++VI ++ + IKM+Q GR G
Sbjct: 529 MTLPLQKDVLETFKASGETKVLIATSVADEGIDIAQCNVVILYEYIGNVIKMIQTRGR-G 587
Query: 218 RKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSI 257
R ++ +C ++ ++ +T+M +++++ N+SI
Sbjct: 588 RAKDSKCFLVSSKEELIEREKTNM------IQEVMMNESI 621
>gi|332662165|ref|YP_004444953.1| DEAD/DEAH box helicase [Haliscomenobacter hydrossis DSM 1100]
gi|332330979|gb|AEE48080.1| DEAD/DEAH box helicase domain protein [Haliscomenobacter hydrossis
DSM 1100]
Length = 451
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
++++F + + V+ ++ L + ++ VGQ SS V Q +++E M FR + + ++
Sbjct: 245 RIVVFCSSKASVSSLYSKLH------RKNLSVGQMSSDVEQDQREETMLAFRNSKIDIIV 298
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCVILLTQGREAHNFQT 239
AT V G+D+ IDLV+ +D + P V R+GRT R +R G + L++ G + F+
Sbjct: 299 ATDVISRGIDVDGIDLVVNYDVPRDPEDYVHRVGRTARAERKGEAITLVSPGDQLR-FRR 357
Query: 240 SMQTCKSYVEKIINNKSI-----YANLAKNGPRMIPAH 272
+ +EK+ +++ YA A+ G P H
Sbjct: 358 IEKLIDKDIEKLGPPQNLGPGPEYAPNARRGKTFGPPH 395
>gi|321475108|gb|EFX86072.1| hypothetical protein DAPPUDRAFT_309030 [Daphnia pulex]
Length = 1607
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 15/141 (10%)
Query: 98 LKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAE--IFDVLKPLEPMVKASMFVGQ 155
L FI + E+ +F A+ ++++F R + + LKPL M KA+ G+
Sbjct: 357 LNFI-ISEVCTPYF---AKYSPVDRLLLFVQPRDIAKHDTTLEFLKPLFTMGKAA---GR 409
Query: 156 SSGVTQQE-----QKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
+S + + + Q EIM+ FR G N L+ATSV EEG+DI + +L+I FD K+ V
Sbjct: 410 NSSLKETQILNMKQNEIMQYFREGLCNLLVATSVLEEGIDIPDCNLIIRFDRIKTYCDYV 469
Query: 211 QRLGRTGRKRNGRCVILLTQG 231
Q GR K+ C IL+++G
Sbjct: 470 QTKGRARSKKAFYC-ILVSRG 489
>gi|303390992|ref|XP_003073726.1| ATP-dependent RNA helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302874|gb|ADM12366.1| ATP-dependent RNA helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 400
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
++Q++++E M+ F+ +F+ L+ T VG GLDI +DLVI FD KS V R+GRT R
Sbjct: 273 LSQEKREETMRMFKENKFSVLVCTDVGSRGLDISHVDLVINFDVPKSGKDYVHRVGRTAR 332
Query: 219 K-RNGRCVILLTQ 230
R G + L+TQ
Sbjct: 333 AGRAGTAITLVTQ 345
>gi|302765743|ref|XP_002966292.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
gi|300165712|gb|EFJ32319.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
Length = 1730
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQ--SSGVTQQEQKEIMKKFRAGEFN 177
+ IIF + V + VL L + V++ VG S V+ + + + KFR G N
Sbjct: 499 RAIIFVDRVVAALTLPCVLSELPSLKYVRSGSLVGHNNSQDVSTRHMHDSLSKFRDGSLN 558
Query: 178 TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
L+ATSV EEGLDI + ++V+ FD K+ + +Q GR RK +++L +G + H
Sbjct: 559 VLVATSVAEEGLDIRQCNVVVRFDLAKTVLAYIQSRGR-ARKPGSDYILMLEKGNKVH 615
>gi|449667535|ref|XP_002167654.2| PREDICTED: nucleolar RNA helicase 2-like [Hydra magnipapillata]
Length = 685
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 158 GVTQQEQKEI-MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
G Q Q+EI ++ FR G+FN LIAT V GLDI E+DLVI + + R GRT
Sbjct: 336 GDISQSQREITLQGFRNGKFNCLIATDVAARGLDIPEVDLVIQTEPPNDIDFYIHRAGRT 395
Query: 217 GRK-RNGRCVILLTQGREA 234
GR R+G CV+ G+E+
Sbjct: 396 GRAGRSGVCVVFYKPGQES 414
>gi|409097076|ref|ZP_11217100.1| DEAD/DEAH box helicase [Pedobacter agri PB92]
Length = 411
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 24/160 (15%)
Query: 117 KGETTK-VIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGE 175
K ET K IIFA+ + V ++ K L+ +KA F S + Q+E+++I+ F+
Sbjct: 238 KDETYKSAIIFASTKEKVKALYKTFKSLK--IKAEAF---HSDLGQKEREDILLAFKNRR 292
Query: 176 FNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAH 235
+I T V G+D+ +DLVI +D P V R+GRT R I L GR+
Sbjct: 293 LPIIIGTDVLSRGIDVEGVDLVINYDVPGDPADYVHRIGRTARAATKGTAITLVNGRDKR 352
Query: 236 NFQTSMQTCKSYVEKIINNKSIYANLAKNGPRM-IPAHVT 274
F +EK+I K PRM +P H+
Sbjct: 353 KFDN--------IEKLIE---------KAVPRMTLPEHIA 375
>gi|325273395|ref|ZP_08139652.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas sp.
TJI-51]
gi|324101468|gb|EGB99057.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas sp.
TJI-51]
Length = 426
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 11/137 (8%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K I+F N R + I+ L + VKA + G+ Q+++K +++F+ G L+A
Sbjct: 258 KAIVFTNTRALADRIYGHLVAKD--VKAFVLHGEKD---QKDRKLAIERFKQGSSKVLVA 312
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN-GRCVILLTQGREAHNFQTS 240
T V GLDI +DLVI FD +S + V R+GRTGR G + L+T HN
Sbjct: 313 TDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLIT-----HNDWNL 367
Query: 241 MQTCKSYVEKIINNKSI 257
M + + Y+++ + I
Sbjct: 368 MSSIERYLKQQFERRVI 384
>gi|345868604|ref|ZP_08820584.1| DEAD/DEAH box helicase family protein [Bizionia argentinensis
JUB59]
gi|344046912|gb|EGV42556.1| DEAD/DEAH box helicase family protein [Bizionia argentinensis
JUB59]
Length = 413
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 160 TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK 219
TQ +++E +KKF++G N LIAT V G+DI E+D VI FD P + R+GRTGR
Sbjct: 280 TQTDRQEALKKFKSGSVNILIATDVAARGIDINELDAVINFDLPNIPETYIHRIGRTGRA 339
Query: 220 RNGRCVILLTQGREAHNFQTSMQ 242
+ G + N+ T++Q
Sbjct: 340 GSTGMAYSFC-GADEKNYITTIQ 361
>gi|348569861|ref|XP_003470716.1| PREDICTED: probable ATP-dependent RNA helicase DDX58-like [Cavia
porcellus]
Length = 914
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 101 IRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQS-- 156
+R IL+ + L+ E T+ I+F R +V + ++ + +K + G+
Sbjct: 602 LRTHLILQEEYHLNPE----TRTILFVKTRALVDALKKWIEENSALNFLKPGILTGRGKT 657
Query: 157 ---SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
+G+T QK ++ FR+ N LIATSV +EG+DI + +LVI ++ + I+M+Q
Sbjct: 658 SNKTGMTLPAQKCVLDTFRSNGDNILIATSVADEGIDIAQCNLVILYEYVGNVIRMIQTR 717
Query: 214 GRTGRKRNGRCVIL 227
GR GR + +C +L
Sbjct: 718 GR-GRAKGSKCYLL 730
>gi|396082239|gb|AFN83849.1| ATP-dependent RNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 397
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
+ Q++++E M+ F+ +FN L+ T VG GLDI +DLVI FD K+ + R+GRT R
Sbjct: 273 LIQEKREETMRMFKESKFNVLVCTDVGSRGLDISHVDLVINFDVPKNGKDYIHRVGRTAR 332
Query: 219 K-RNGRCVILLTQGREAHNFQ 238
R+G + L+TQ + FQ
Sbjct: 333 AGRSGTAITLVTQ-YDVEQFQ 352
>gi|440893954|gb|ELR46543.1| Putative ATP-dependent RNA helicase DDX58, partial [Bos grunniens
mutus]
Length = 927
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 14/169 (8%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T+ I+F
Sbjct: 581 GFDAIEQDLTQRFEEKLLELEGISMDPSNENAKLKDLCFILQEEYHLNPE----TRTILF 636
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRAG-EFNT 178
R +V + + ++ P +K + G Q+ G+T QK + FR +
Sbjct: 637 VKTRALVDALKNWIEENPKLSFLKPGILTGRGRTNQTMGMTLPAQKCALDAFRTNRDSKI 696
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L
Sbjct: 697 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLL 744
>gi|452824703|gb|EME31704.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 758
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 24/198 (12%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQK 165
ILES +++ + + I+FA + V + + +A +TQ++++
Sbjct: 432 ILESVISVYSAEMTNFRCIVFARTKAEVDSLVSSGRIHNGAAQA-----LHGDITQKQRE 486
Query: 166 EIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRC 224
+ KFR G F LIAT V GLDI +DLVI + + + R GRTGR R G C
Sbjct: 487 ITLSKFREGSFQVLIATDVAARGLDINGVDLVIQYRVPEDIDMYIHRAGRTGRAGRQGTC 546
Query: 225 VILLTQGREAHNFQTSMQ-TCK--------SYVEKIINNKS---IYANLAKNGPR---MI 269
+IL T E N T M+ CK ++++I K+ + A+ A G +I
Sbjct: 547 IILYTD--EERNKLTLMENVCKIRFRLESPPSIQQVIETKANGFLRASQAVEGKWVEPLI 604
Query: 270 PAHVTPRIKCLHIVVKDR 287
P V I+ LHI ++R
Sbjct: 605 PV-VKEYIESLHIEGEER 621
>gi|350272022|ref|YP_004883330.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
gi|348596864|dbj|BAL00825.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
Length = 558
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
+ +IF+N + +V E+ + L V+ G + Q ++ +M FR G + L+A
Sbjct: 244 RALIFSNTKTMVDELTERLSAAGFSVE-----GLHGDMKQLQRTTVMNGFRKGRVSILVA 298
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGR 232
T V G+D+ ++D VI FD K P V R+GRTGR I L GR
Sbjct: 299 TDVAARGIDVSDLDYVINFDIPKEPDSYVHRIGRTGRAGRAGTAITLCCGR 349
>gi|115292171|emb|CAK32533.1| putative dicer-like protein [Mucor circinelloides]
Length = 1529
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 10/114 (8%)
Query: 124 IIFANYR---VVVAEIFDVLKPLEPMVKASMFVGQ---SSGVTQQE---QKEIMKKFRAG 174
IIF + R V + + + + + ++ + +G S G Q + Q E++ KFRAG
Sbjct: 414 IIFVDRRHTAVAIKILIESISVFKEDIRCDVLIGHGVKSGGDLQMKYTKQNEVIAKFRAG 473
Query: 175 EFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILL 228
E N LIAT+V EEGLDI + VI FD K+ I +Q GR R+++ + +++L
Sbjct: 474 ELNLLIATNVAEEGLDIQACNYVIRFDLFKTVIAYIQSRGR-ARRKDSKYILML 526
>gi|148670597|gb|EDL02544.1| DNA segment, Chr 11, Lothar Hennighausen 2, expressed, isoform
CRA_c [Mus musculus]
Length = 533
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 16/123 (13%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPM-----VKASMFVG-----QSSGVTQQEQKEIMKK 170
T+ IIF R + + L+ +P +K M +G QS+ +TQ++Q+E++++
Sbjct: 368 TRGIIFTRTRQTASSLLLWLRQ-QPCLQTVGIKPQMLIGAGNTSQSTHMTQKDQQEVIQE 426
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV--ILL 228
FR G + L+ATSV EEGLDI + ++V+ + + I MVQ GR R G+ V L
Sbjct: 427 FRDGILSLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQ---ARGRARAGQSVYSFLA 483
Query: 229 TQG 231
T+G
Sbjct: 484 TEG 486
>gi|255940232|ref|XP_002560885.1| Pc16g05440 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585508|emb|CAP93214.1| Pc16g05440 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1162
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 16/175 (9%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF RL E+L + + A E + +IF + R A+ D+LK L M K + G
Sbjct: 753 KFFRLLELLGNLYEDDAN--EDYRTLIFVD-RQEAAD--DLLKQL--MYKGYPCMSIHGG 805
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ +++F+AG F L+ATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 806 KDQIDRDSTIQEFKAGVFPILVATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 865
Query: 219 KRN-GRCVILLTQGRE------AHNFQTSMQTCKSYVEKIIN--NKSIYANLAKN 264
N G V +T+ ++ A + S Q ++K+++ N+ + A KN
Sbjct: 866 AGNTGTAVTFVTEEQDRYALDIAKALKQSGQEVPEPLQKLVDGFNEKVKAGKEKN 920
>gi|296204692|ref|XP_002749435.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Callithrix jacchus]
Length = 1025
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 147 VKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFD 201
VKA +G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI +
Sbjct: 749 VKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYG 808
Query: 202 AQKSPIKMVQRLGRT 216
+ I MVQ GR
Sbjct: 809 LVTNEIAMVQARGRA 823
>gi|120601130|ref|YP_965530.1| DEAD/DEAH box helicase [Desulfovibrio vulgaris DP4]
gi|120561359|gb|ABM27103.1| DEAD/DEAH box helicase domain protein [Desulfovibrio vulgaris DP4]
Length = 532
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 11/181 (6%)
Query: 86 INIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEP 145
+ + ++E AW ++ R + + F + + K I+F + V E+ L+
Sbjct: 214 LTVANTEQAWFEVRPFRRVDAVCRIFDAYIPR----KAIVFRATKQGVDELAAALQ---- 265
Query: 146 MVKASMFVGQSSGVTQQEQKE-IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQK 204
+ + G Q Q+E +M +FRAG + L+AT V GLD+ ++D VI FD
Sbjct: 266 --QRGILADALHGDLNQTQRERVMSRFRAGGISVLVATDVAARGLDVDDVDTVINFDLPN 323
Query: 205 SPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKN 264
P V R+GRTGR GR+ + + + S +++ + A+ A+
Sbjct: 324 DPETYVHRIGRTGRAGRTGQAFSFAAGRDVYKLRDIQRVTGSRIDRRAMPTAADASRART 383
Query: 265 G 265
G
Sbjct: 384 G 384
>gi|410657291|ref|YP_006909662.1| ATP-dependent RNA helicase YxiN [Dehalobacter sp. DCA]
gi|410660327|ref|YP_006912698.1| ATP-dependent RNA helicase YxiN [Dehalobacter sp. CF]
gi|409019646|gb|AFV01677.1| ATP-dependent RNA helicase YxiN [Dehalobacter sp. DCA]
gi|409022683|gb|AFV04713.1| ATP-dependent RNA helicase YxiN [Dehalobacter sp. CF]
Length = 483
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 13/127 (10%)
Query: 124 IIFANYRVVVAEIFDVLKPLE-PMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIAT 182
+IF N + V E++ LK L+ P K G+ Q + +M F+ G F LIAT
Sbjct: 248 LIFCNTKHQVDEVYAELKLLDYPCAKIH------GGMEQGHRLSVMDDFKRGYFRYLIAT 301
Query: 183 SVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCVILLTQGREAHNFQTSM 241
V G+DI +I LVI FD + V R+GRTGR +NG+ + +T+ +++ +
Sbjct: 302 DVAARGIDIEDISLVINFDLPQEKESYVHRIGRTGRLNKNGKAISFVTEEDDSY-----L 356
Query: 242 QTCKSYV 248
Q + Y+
Sbjct: 357 QDIQKYI 363
>gi|393911181|gb|EFO18387.2| hypothetical protein LOAG_10109 [Loa loa]
Length = 542
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K I L+ + ++ F A +IF ++ ++ V++ L+P + M S
Sbjct: 346 HGKIIGLKALFQNSFEPPA--------LIFVQSKLRAKQLVPVIESLQPPIPVKMI---S 394
Query: 157 SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
S T+ E++ + +FR+G L+ T + GLD+ ++LV+ FD S I + R+GRT
Sbjct: 395 SEKTETERESAIAEFRSGHIWALVCTDLMGRGLDLSGVNLVVNFDLPTSIISYIHRIGRT 454
Query: 217 GRK-RNGRCVILLTQ 230
GR R G V T+
Sbjct: 455 GRAGRKGHAVTYFTE 469
>gi|444302288|pdb|4I1S|A Chain A, Melanoma Differentiation Associated Protein-5 Helicase
Domain Complex With Inhibitor Non-structural Protein V
Length = 243
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Query: 47 LRSFYNNLVEVSKE--DGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLR 104
L++FYN+ E E GS + D L L L+ K + ++ + + K +LR
Sbjct: 80 LKTFYNDEKEKKFEVLSGSGSLDESDIFLXTLF--LRNKKILKKLAENPEYENEKLTKLR 137
Query: 105 EILESHFRLHAEKGETTKVIIFANYR----VVVAEIFDVLKPLEPMVKASMFVGQSSG-- 158
+ HF E+ + IIF R + I D K E VKA +G
Sbjct: 138 NTIXEHF---TRTEESARGIIFTKTRQSAYALSQWITDNKKFAEVGVKAHHLIGAGHSSE 194
Query: 159 ---VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICF 200
TQ EQ+E++ KFR G+ N LIAT+V EEGLDI E ++VI +
Sbjct: 195 FKPXTQNEQREVISKFRTGKINLLIATTVAEEGLDIKECNIVIRY 239
>gi|76624102|ref|XP_580928.2| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 1 [Bos
taurus]
gi|297477666|ref|XP_002689526.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Bos taurus]
gi|296484925|tpg|DAA27040.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Bos taurus]
Length = 942
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 14/169 (8%)
Query: 68 GKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIF 126
G D Q+L Q+ + KL ++ +S + + + K L IL+ + L+ E T+ I+F
Sbjct: 581 GFDAIEQDLTQRFEEKLLELEGISMDPSNENAKLKDLCFILQEEYHLNPE----TRTILF 636
Query: 127 ANYRVVVAEIFDVLK--PLEPMVKASMFVG-----QSSGVTQQEQKEIMKKFRAG-EFNT 178
R +V + + ++ P +K + G Q+ G+T QK + FR +
Sbjct: 637 VKTRALVDALKNWIEENPKLSFLKPGILTGRGRTNQTMGMTLPAQKCALDAFRTNRDSKI 696
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
LIATSV +EG+DI + +LVI ++ + IKM+Q GR GR R +C +L
Sbjct: 697 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLL 744
>gi|432098359|gb|ELK28159.1| Interferon-induced helicase C domain-containing protein 1 [Myotis
davidii]
Length = 952
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 147 VKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFD 201
VKA +G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E ++VI +
Sbjct: 675 VKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIEECNIVIRYG 734
Query: 202 AQKSPIKMVQRLGRT 216
+ I MVQ GR
Sbjct: 735 LVTNEIAMVQARGRA 749
>gi|379987682|gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]
Length = 1622
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM--VKASMFVGQS 156
K +RL IL S+F + + K IIF N V + +L+ L+ + K VG
Sbjct: 389 KLLRLIGIL-SNFGVQPD----MKCIIFVNRIVTARSLSYMLQHLKVLSSWKCGFLVGVH 443
Query: 157 SGVTQQEQKE---IMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
SG+ +K I+ KFR+GE N L+AT VGEEGLDI LVI FD ++ +Q
Sbjct: 444 SGLKSMSRKNTNIILNKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 503
Query: 214 GRT 216
GR
Sbjct: 504 GRA 506
>gi|402573181|ref|YP_006622524.1| DNA/RNA helicase [Desulfosporosinus meridiei DSM 13257]
gi|402254378|gb|AFQ44653.1| DNA/RNA helicase, superfamily II [Desulfosporosinus meridiei DSM
13257]
Length = 537
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
++QQ++ +MK+FR G+ LIAT V GLDI + VI FD + P+ V R+GRTGR
Sbjct: 280 LSQQQRDRVMKRFRDGKTELLIATDVAARGLDINNVTHVINFDIPQDPVSYVHRIGRTGR 339
Query: 219 -KRNGRCVILLT 229
R G+ + L++
Sbjct: 340 IGRKGQAITLIS 351
>gi|312087983|ref|XP_003145684.1| hypothetical protein LOAG_10109 [Loa loa]
Length = 537
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 97 HLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQS 156
H K I L+ + ++ F A +IF ++ ++ V++ L+P + M S
Sbjct: 341 HGKIIGLKALFQNSFEPPA--------LIFVQSKLRAKQLVPVIESLQPPIPVKMI---S 389
Query: 157 SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
S T+ E++ + +FR+G L+ T + GLD+ ++LV+ FD S I + R+GRT
Sbjct: 390 SEKTETERESAIAEFRSGHIWALVCTDLMGRGLDLSGVNLVVNFDLPTSIISYIHRIGRT 449
Query: 217 GRK-RNGRCVILLTQ 230
GR R G V T+
Sbjct: 450 GRAGRKGHAVTYFTE 464
>gi|148670595|gb|EDL02542.1| DNA segment, Chr 11, Lothar Hennighausen 2, expressed, isoform
CRA_a [Mus musculus]
Length = 609
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 16/123 (13%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPM-----VKASMFVG-----QSSGVTQQEQKEIMKK 170
T+ IIF R + + L+ +P +K M +G QS+ +TQ++Q+E++++
Sbjct: 299 TRGIIFTRTRQTASSLLLWLRQ-QPCLQTVGIKPQMLIGAGNTSQSTHMTQKDQQEVIQE 357
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV--ILL 228
FR G + L+ATSV EEGLDI + ++V+ + + I MVQ GR R G+ V L
Sbjct: 358 FRDGILSLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQ---ARGRARAGQSVYSFLA 414
Query: 229 TQG 231
T+G
Sbjct: 415 TEG 417
>gi|315042594|ref|XP_003170673.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Arthroderma
gypseum CBS 118893]
gi|311344462|gb|EFR03665.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Arthroderma
gypseum CBS 118893]
Length = 1183
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + ++ E + ++F + + + L M K + G
Sbjct: 783 KFVRLLELLGNLY--SDDENEDARTLVFVDRQEAADRLLRDL-----MRKGYPCMSIHGG 835
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ + F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 836 KDQIDRDSTIDDFKAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 895
Query: 219 KRN-GRCVILLTQGREAHNFQTS 240
N G V LT+ +E ++ S
Sbjct: 896 AGNTGTAVTFLTEDQERYSVDIS 918
>gi|296807861|ref|XP_002844269.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Arthroderma
otae CBS 113480]
gi|238843752|gb|EEQ33414.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Arthroderma
otae CBS 113480]
Length = 1183
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + ++ E + ++F + + + L M K + G
Sbjct: 783 KFVRLLELLGNLY--SDDENEDARTLVFVDRQEAADRLLRDL-----MRKGYPCMSIHGG 835
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ + F+AG F LIATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 836 KDQIDRDSTIDDFKAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 895
Query: 219 KRN-GRCVILLTQGREAHNFQTS 240
N G V LT+ +E ++ S
Sbjct: 896 AGNTGTAVTFLTEDQERYSVDIS 918
>gi|380481939|emb|CCF41547.1| RNase3 domain-containing protein [Colletotrichum higginsianum]
Length = 1588
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 98 LKFIRLREILESHFRLHAEKGETTKVIIFANYR---VVVAEIFDVLKPLEPMVKASMFVG 154
+K +RL E L+ F G + I+F R V++A++F P + +M VG
Sbjct: 491 IKVLRLWEELKLRF----TNGPGYRCIVFVEMRLTAVLLADLFKQEGIKLPYLSPAMLVG 546
Query: 155 QSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
+ ++ ++Q + KFR E N L AT V EEGLDI + +LV+ FD KS I+
Sbjct: 547 SQAATGLANMSFKQQVLTIHKFRQAEVNCLFATQVAEEGLDIPDCNLVMRFDLYKSVIQY 606
Query: 210 VQRLGRTGRK 219
+Q GR R+
Sbjct: 607 IQSKGRARRQ 616
>gi|320163352|gb|EFW40251.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 1073
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 81/155 (52%), Gaps = 19/155 (12%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMF--VGQS 156
K++RL E+L + E+G VI+F R A++ LK L AS + +
Sbjct: 604 KYLRLLELLG----VWQEEG---SVIVFVE-RQEAADML--LKSL----YASGYPCLSLH 649
Query: 157 SGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRT 216
+G+ Q +++E + F+AG+ LIATSV GLD+ E+ LV+ +DA V R+GRT
Sbjct: 650 AGLDQGDREETLIAFKAGDVRLLIATSVAARGLDVKELKLVVNYDAPNHYEDYVHRVGRT 709
Query: 217 GRK-RNGRCVILLT--QGREAHNFQTSMQTCKSYV 248
GR R G LT QGR A + ++Q + V
Sbjct: 710 GRAGRKGTSYTFLTPEQGRFAGDILNALQLSGANV 744
>gi|410097606|ref|ZP_11292587.1| hypothetical protein HMPREF1076_01765 [Parabacteroides goldsteinii
CL02T12C30]
gi|409223696|gb|EKN16631.1| hypothetical protein HMPREF1076_01765 [Parabacteroides goldsteinii
CL02T12C30]
Length = 431
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
+VIIF++ ++ V E+ LK ++ V A S + Q +++E+MK+F+ G + L+A
Sbjct: 246 RVIIFSSSKMKVKELASTLKRMKFNVAA-----MHSDLEQSQREEVMKEFKNGHIDILVA 300
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
T V G+DI +I LVI +D P V R+GRT R G + +
Sbjct: 301 TDVVSRGIDINDIKLVINYDIPHDPEDYVHRIGRTARGTGGEGLAI 346
>gi|325293235|ref|YP_004279099.1| ATP-dependent RNA helicase [Agrobacterium sp. H13-3]
gi|325061088|gb|ADY64779.1| ATP-dependent RNA helicase [Agrobacterium sp. H13-3]
Length = 533
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 70 DNDLQN--LLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
D LQN ++ KP ++ SH K R +L R AE+ E IIF
Sbjct: 226 DRFLQNPTRIEVAKPSSTAKTVTQRIVASHNKDYEKRAVLRDLVR--AEEAELKNAIIFC 283
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQSSG-VTQQEQKEIMKKFRAGEFNTLIATSVGE 186
N + VA++F L + VG G + Q+ + +++ FR G+ L+A+ V
Sbjct: 284 NRKKDVADLFRSLD------RHGFSVGALHGDMDQRSRTTMLQNFRDGQLTLLVASDVAA 337
Query: 187 EGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLTQ 230
GLDI ++ V FD V R+GRTGR R+G+ L+T+
Sbjct: 338 RGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGKAFTLVTK 382
>gi|388468344|ref|ZP_10142554.1| DEAD/DEAH box helicase domain protein [Pseudomonas synxantha BG33R]
gi|388011924|gb|EIK73111.1| DEAD/DEAH box helicase domain protein [Pseudomonas synxantha BG33R]
Length = 448
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K I+F N R I+ L E KA + G+ Q+++K + + +AG L+A
Sbjct: 245 KAIVFTNTRAAADRIYGRLVAQE--YKAFVLHGEKD---QKDRKLAIDRLKAGGVKILVA 299
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
T V GLD+ +DLVI FD +S + V R+GRTGR N I L H M
Sbjct: 300 TDVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLI----CHGDWNLM 355
Query: 242 QTCKSYVEKIINNKSI 257
+ + Y+++ ++I
Sbjct: 356 SSIERYLKQSFERRTI 371
>gi|387894976|ref|YP_006325273.1| DEAD/DEAH box helicase [Pseudomonas fluorescens A506]
gi|387163383|gb|AFJ58582.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
A506]
Length = 448
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K I+F N R I+ L E KA + G+ Q+++K + + +AG L+A
Sbjct: 245 KAIVFTNTRAAADRIYGRLVAQE--YKAFVLHGEKD---QKDRKLAIDRLKAGGVKILVA 299
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
T V GLD+ +DLVI FD +S + V R+GRTGR N I L H M
Sbjct: 300 TDVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLI----CHGDWNLM 355
Query: 242 QTCKSYVEKIINNKSI 257
+ + Y+++ ++I
Sbjct: 356 SSIERYLKQSFERRTI 371
>gi|66802840|ref|XP_635263.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
gi|60463423|gb|EAL61608.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
Length = 2403
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 115 AEKGETTK---VIIFANYRVVVAEIFDVLK--PLEPMVKASMFVGQSS--GVTQQEQKEI 167
A GE K +++F R + + +LK P + + VG + G+ ++Q+ I
Sbjct: 634 ASDGELQKDLRILVFVETRSGASNLTSMLKKEPFQEYLHTKRLVGHNGDDGMDSEKQQSI 693
Query: 168 MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
++KFR G+ ++ T+V EEG+D+ + ++VIC+D S ++QR GR K + +I+
Sbjct: 694 IRKFRDGKCRLIVTTNVLEEGIDVQDCNIVICYDGILSLKSLIQRRGRARSKNESKFIII 753
Query: 228 LTQGREAH--NFQTSMQTCKSYVEKIINNK 255
++ N +S + + +I++N+
Sbjct: 754 YNDDKDLKILNILSSENLLNNSINQILSNR 783
>gi|423692871|ref|ZP_17667391.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
SS101]
gi|387997844|gb|EIK59173.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
SS101]
Length = 448
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K I+F N R I+ L E KA + G+ Q+++K + + +AG L+A
Sbjct: 245 KAIVFTNTRAAADRIYGRLVAQE--YKAFVLHGEKD---QKDRKLAIDRLKAGGVKILVA 299
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
T V GLD+ +DLVI FD +S + V R+GRTGR N I L H M
Sbjct: 300 TDVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLI----CHGDWNLM 355
Query: 242 QTCKSYVEKIINNKSI 257
+ + Y+++ ++I
Sbjct: 356 SSIERYLKQSFERRTI 371
>gi|418408565|ref|ZP_12981881.1| ATP-dependent RNA helicase [Agrobacterium tumefaciens 5A]
gi|358005479|gb|EHJ97805.1| ATP-dependent RNA helicase [Agrobacterium tumefaciens 5A]
Length = 504
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 70 DNDLQN--LLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
D LQN ++ KP ++ SH K R +L R AE+ E IIF
Sbjct: 197 DRFLQNPTRIEVAKPSSTAKTVTQRIVASHNKDYEKRAVLRDLVR--AEEAELKNAIIFC 254
Query: 128 NYRVVVAEIFDVLKPLEPMVKASMFVGQSSG-VTQQEQKEIMKKFRAGEFNTLIATSVGE 186
N + VA++F L + VG G + Q+ + +++ FR G+ L+A+ V
Sbjct: 255 NRKKDVADLFRSLD------RHGFSVGALHGDMDQRSRTTMLQNFRDGQLTLLVASDVAA 308
Query: 187 EGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLTQ 230
GLDI ++ V FD V R+GRTGR R+G+ L+T+
Sbjct: 309 RGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGKAFTLVTK 353
>gi|225682788|gb|EEH21072.1| pre-mRNA-processing ATP-dependent RNA helicase prp5
[Paracoccidioides brasiliensis Pb03]
Length = 1203
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 99 KFIRLREILESHFRLHAEKG-ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS 157
KF+RL +L L+A+ E + +IF + + + L M K +
Sbjct: 811 KFVRLLALLGD---LYADDNNEDARTLIFVDRQEAADGLLRDL-----MHKGYPCMSIHG 862
Query: 158 GVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
G Q ++ + F+AG F LIATSV GLD+ ++ LVI +DA V R GRTG
Sbjct: 863 GKDQVDRDSTIADFKAGVFPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTG 922
Query: 218 RKRN-GRCVILLTQGREAHN------FQTSMQTCKSYVEKIINN 254
R N G V LT+ +E ++ + S Q V+K++N+
Sbjct: 923 RAGNTGTAVTFLTEVQERYSVDISKALKQSGQPVPEAVQKMVNS 966
>gi|345860075|ref|ZP_08812402.1| DEAD-box ATP-dependent RNA helicase cshA domain protein
[Desulfosporosinus sp. OT]
gi|344326819|gb|EGW38270.1| DEAD-box ATP-dependent RNA helicase cshA domain protein
[Desulfosporosinus sp. OT]
Length = 536
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
G ++QQ++ +MK+FR G+ L+AT V GLDI + VI FD + P+ V R+
Sbjct: 275 GLHGDLSQQQRDRVMKRFRDGKSELLVATDVAARGLDINNVTHVINFDIPQDPVSYVHRI 334
Query: 214 GRTGR-KRNGRCVILLT 229
GRTGR R G+ + L++
Sbjct: 335 GRTGRVGRKGQAITLIS 351
>gi|408480568|ref|ZP_11186787.1| ATP-dependent RNA helicase [Pseudomonas sp. R81]
Length = 448
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K I+F N R I+ L E KA + G+ Q+++K + + +AG L+A
Sbjct: 245 KAIVFTNTRAAADRIYGRLVAQE--YKAFVLHGEKD---QKDRKLAIDRLKAGGVKILVA 299
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
T V GLD+ +DLVI FD +S + V R+GRTGR N I L H M
Sbjct: 300 TDVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLI----CHGDWNLM 355
Query: 242 QTCKSYVEKIINNKSI 257
+ + Y+++ ++I
Sbjct: 356 SSIERYLKQSFERRTI 371
>gi|321477029|gb|EFX87988.1| hypothetical protein DAPPUDRAFT_311480 [Daphnia pulex]
Length = 711
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 15/119 (12%)
Query: 124 IIFANYRVVVAEIFDVLKPLE------PMVKASMFVGQSSG---------VTQQEQKEIM 168
IIF R V + ++ LK + VK +GQ++G + QK+IM
Sbjct: 407 IIFVERRSVASVLYHFLKDIRQHDENLEFVKPLFTMGQAAGSASSLRESQILNMNQKDIM 466
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
+ FR+G N L+ATSV EEG+DI E +L++ FD ++ VQ GR K+ C+++
Sbjct: 467 RDFRSGNCNLLVATSVLEEGVDIPECNLIVRFDKIRTYCDYVQTKGRARSKKAFFCMLV 525
>gi|294673582|ref|YP_003574198.1| DEAD/DEAH box helicase [Prevotella ruminicola 23]
gi|294472821|gb|ADE82210.1| ATP-dependent helicase, DEAD/DEAH box family [Prevotella ruminicola
23]
Length = 446
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 117 KGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVG---QSSGVTQQEQKEIMKKFRA 173
KG+ +VIIF+ + V E+ LK SM + S ++Q E+ E M +F+A
Sbjct: 242 KGDLQRVIIFSGKKERVKEVTRKLK--------SMHINCDQMHSDLSQAERDEAMYRFKA 293
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRCVILLTQGR 232
G+ + L+AT + G+DI +I LVI +D V R+GRT R R+G + ++
Sbjct: 294 GQTDVLVATDIVARGIDIDDIRLVINYDVPSDSEDYVHRIGRTARADRDGEAITFVSDD- 352
Query: 233 EAHNFQTSMQTCKSYVEKI 251
+ + FQ+ VEK+
Sbjct: 353 DMYRFQSIEHFLGKEVEKL 371
>gi|301612421|ref|XP_002935717.1| PREDICTED: probable ATP-dependent RNA helicase DDX58-like [Xenopus
(Silurana) tropicalis]
Length = 1032
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 103/197 (52%), Gaps = 26/197 (13%)
Query: 47 LRSFYNNLVEVSKEDGSCPILGKDNDLQNLLQQLKPKL-DINIMSSEYAWSHLKFIRLRE 105
L +F+NN+ ++GS + + L N+ Q P+L DI+ + L+FI
Sbjct: 586 LENFFNNM-----KNGSFNEI--EQKLYNMFQDKLPQLLDISKNNINPKLEELQFI---- 634
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLK--PLEPMVKASMFVGQSS-----G 158
L+ + + E T+ ++F R +V+ + ++ PL +K + +G+S G
Sbjct: 635 -LDESYHENPE----TRSLLFVKTRSLVSALKTWIEENPLLQFLKPEILIGRSKRNESLG 689
Query: 159 VTQQEQKEIMKKFR-AGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTG 217
+T QK ++ F+ + E LIATSV +EG+DI +LV+ ++ + KM+Q GR G
Sbjct: 690 MTLSSQKGALEAFKNSAESKLLIATSVADEGIDIQACNLVLLYEYVGNVTKMIQVRGR-G 748
Query: 218 RKRNGRCVILLTQGREA 234
R ++ +C ++ ++G EA
Sbjct: 749 RAKDSKCFLITSKGEEA 765
>gi|291235953|ref|XP_002737903.1| PREDICTED: Dicer Related Helicase family member (drh-1)-like
[Saccoglossus kowalevskii]
Length = 996
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 9/123 (7%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEP--MVKASMFVG-Q 155
K + L++ L+ + EKG + IIF RV+ + + D +K + M++ S G +
Sbjct: 682 KVVALKQALKQEVQ---EKGNDFRGIIFVKTRVLASAVLDCIKEDQELQMLRPSRLTGVK 738
Query: 156 SSG---VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQR 212
++G +TQ EQ ++KF G+ LIATSV EEGLDI E +VI ++ + I M Q
Sbjct: 739 TAGDESMTQAEQDSNLRKFADGDCKLLIATSVAEEGLDIKECHMVIRYNYATNEISMRQA 798
Query: 213 LGR 215
GR
Sbjct: 799 RGR 801
>gi|74142314|dbj|BAE31919.1| unnamed protein product [Mus musculus]
Length = 672
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPM----VKASMFVG-----QSSGVTQQEQKEIMKKF 171
T+ IIF R + + L+ + +K M +G QS+ +TQ++Q+E++++F
Sbjct: 368 TRGIIFTRTRQTASSLLLWLRQQPCLQTVGIKPQMLIGAGNTSQSTHMTQKDQQEVIQEF 427
Query: 172 RAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV--ILLT 229
R G + L+ATSV EEGLDI + ++V+ + + I MVQ GR R G+ V L T
Sbjct: 428 RDGILSLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQ---ARGRARAGQSVYSFLAT 484
Query: 230 QG 231
+G
Sbjct: 485 EG 486
>gi|269795126|ref|YP_003314581.1| DNA/RNA helicase [Sanguibacter keddieii DSM 10542]
gi|269097311|gb|ACZ21747.1| DNA/RNA helicase, superfamily II [Sanguibacter keddieii DSM 10542]
Length = 614
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 124 IIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATS 183
I+F R E+ L +E + A+ G V Q+++++I+++ RAG + L+AT
Sbjct: 273 IVFCRTRGAAEEVGSAL--IERGISAATISGD---VAQKDREKIVERLRAGALDVLVATD 327
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLT 229
V GLD+ I LV+ FD P V R+GRTGR GR + L+
Sbjct: 328 VAARGLDVDRIGLVVNFDIPGEPEAYVHRIGRTGRA--GRTGVALS 371
>gi|198274601|ref|ZP_03207133.1| hypothetical protein BACPLE_00753 [Bacteroides plebeius DSM 17135]
gi|198272048|gb|EDY96317.1| DEAD/DEAH box helicase [Bacteroides plebeius DSM 17135]
Length = 424
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEFNTLI 180
+VIIFA+ ++ V E+ LK + + VG+ S + Q +++EIM +FR + L+
Sbjct: 246 RVIIFASSKLKVKEVTKALK------RMKLNVGEMHSDLEQSQREEIMHEFRNRRIDILV 299
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTS 240
AT + G+DI +I LVI +D V R+GRT R N C I E QT
Sbjct: 300 ATDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGCAITFVSETE----QTR 355
Query: 241 MQTCKSYVEKIINNKSIYANLAKNGPRMIP 270
+ ++++ K I + L + GP P
Sbjct: 356 FKQIETFLGKDIYKLPVPEELGE-GPVYAP 384
>gi|127511701|ref|YP_001092898.1| ATP-dependent RNA helicase SrmB [Shewanella loihica PV-4]
gi|126636996|gb|ABO22639.1| DEAD/DEAH box helicase domain protein [Shewanella loihica PV-4]
Length = 419
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 93 YAWSHL------KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPM 146
+ W HL KF L +IL+ + E ++ I+F R VVA + L+
Sbjct: 233 HQWMHLADDKEHKFALLCDILK--------REEVSRAIVFVKTREVVASLEGQLQ----- 279
Query: 147 VKASMFVGQSSGVTQQEQK-EIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKS 205
+A + G +Q+ + + + +F GE N L+AT V G+DI I VI FD +S
Sbjct: 280 -QAGIHCAFMRGDMEQKARFQALGRFTKGEVNVLLATDVAARGIDIDGITHVINFDMPRS 338
Query: 206 PIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEKIINNKSI 257
V R+GRTGR N I L EAH+ + + + Y+E+ + + I
Sbjct: 339 ADTYVHRIGRTGRAGNKGTAISLV---EAHDMRV-VAKIERYIEQPLKRRVI 386
>gi|212527694|ref|XP_002144004.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces marneffei
ATCC 18224]
gi|210073402|gb|EEA27489.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces marneffei
ATCC 18224]
Length = 538
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 110 HFRLHAEKGETTKVIIFANYRVVVAEIFD-VLKPLEPMVKASMFVGQSSGVTQQEQKEIM 168
H L E+ T IIF N R A++ + +L+ L V + S + Q E+ +
Sbjct: 353 HVLLSTERNSTKPAIIFCN-RTRTADLLERILRRLSHRVTS-----LHSLLPQSERTANL 406
Query: 169 KKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVIL 227
+FRA L+AT V GLDI + LVI FD ++P V R+GRT R R G V L
Sbjct: 407 SRFRASAARLLVATDVASRGLDIPNVSLVINFDVPRNPDDYVHRVGRTARAGRTGESVTL 466
Query: 228 LTQ 230
+ Q
Sbjct: 467 VGQ 469
>gi|302665308|ref|XP_003024266.1| hypothetical protein TRV_01617 [Trichophyton verrucosum HKI 0517]
gi|291188313|gb|EFE43655.1| hypothetical protein TRV_01617 [Trichophyton verrucosum HKI 0517]
Length = 1171
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSG 158
KF+RL E+L + + ++ E + ++F + + + L M K + G
Sbjct: 771 KFVRLLELLGNLY--SDDENEDARTLVFVDRQEAADRLLRDL-----MRKGYPCMSIHGG 823
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
Q ++ + F+AG F L+ATSV GLD+ ++ LV+ +DA V R GRTGR
Sbjct: 824 KDQIDRDSTIDDFKAGIFPILVATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGR 883
Query: 219 KRN-GRCVILLTQGREAHN------FQTSMQTCKSYVEKIIN 253
N G V LT+ +E ++ + S Q ++K++N
Sbjct: 884 AGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPIQKMVN 925
>gi|294936470|ref|XP_002781775.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
gi|239892724|gb|EER13570.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
Length = 177
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
+TQ + + +FRAG + L+AT V GLDI +D+VI FD K+P + + R+GRT R
Sbjct: 19 MTQTHRLGALNQFRAGTRSILVATDVAARGLDIPSVDVVINFDVPKNPEEYIHRVGRTAR 78
Query: 219 K-RNGRCVILLTQ 230
R GR V L+TQ
Sbjct: 79 AGRTGRSVTLVTQ 91
>gi|295413446|gb|ACT68336.2| interferon-induced helicase C domain-containing protein 1
[Ctenopharyngodon idella]
gi|379048247|gb|AFC88291.1| MDA5 [Ctenopharyngodon idella]
Length = 961
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 60 EDGSCPILGKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGE 119
++G+ I + L L + K KL + EY ++L +L+ I+ F E
Sbjct: 615 DEGTITITDTERFLFTLFKDKKAKLQELMGKPEYENNNLA--QLKTIILKEFSTR----E 668
Query: 120 TTKVIIFANYRVVVAEIFDVL----KPLEPMVKASMFVGQSSG-----VTQQEQKEIMKK 170
+ IIF R+ + + K E V AS +G +T EQK+++++
Sbjct: 669 VARGIIFTRTRLSAIALCQWIQENPKFEEVGVSASYLIGGGDQSVVKPMTAAEQKDVLQR 728
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
FR GE N LIAT+V EEGLDI E ++VI + + + M+Q GR GR + ++
Sbjct: 729 FRKGEINLLIATTVAEEGLDIAECNVVIRYCLVTNEVAMIQARGR-GRAEDSSYTLVAEA 787
Query: 231 G 231
G
Sbjct: 788 G 788
>gi|14475571|emb|CAC41975.1| putative RNA dependent RNA polymerase [Dictyostelium discoideum]
Length = 1964
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 115 AEKGETTK---VIIFANYRVVVAEIFDVLK--PLEPMVKASMFVGQSS--GVTQQEQKEI 167
A GE K +++F R + + +LK P + + VG + G+ ++Q+ I
Sbjct: 191 ASDGELQKDLRILVFVETRSGASNLTSMLKKEPFQEYLHTKRLVGHNGDDGMDSEKQQSI 250
Query: 168 MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
++KFR G+ ++ T+V EEG+D+ + ++VIC+D S ++QR GR K + +I+
Sbjct: 251 IRKFRDGKCRLIVTTNVLEEGIDVQDCNIVICYDGILSLKSLIQRRGRARSKNESKFIII 310
Query: 228 LTQGREAH--NFQTSMQTCKSYVEKIINNK 255
++ N +S + + +I++N+
Sbjct: 311 YNDDKDLKILNILSSENLLNNSINQILSNR 340
>gi|13194586|gb|AAK15474.1| unknown [Mus musculus]
gi|13194588|gb|AAK15475.1| unknown [Mus musculus]
gi|20809730|gb|AAH29209.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Mus musculus]
gi|148670596|gb|EDL02543.1| DNA segment, Chr 11, Lothar Hennighausen 2, expressed, isoform
CRA_b [Mus musculus]
Length = 678
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 16/123 (13%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPM-----VKASMFVG-----QSSGVTQQEQKEIMKK 170
T+ IIF R + + L+ +P +K M +G QS+ +TQ++Q+E++++
Sbjct: 368 TRGIIFTRTRQTASSLLLWLRQ-QPCLQTVGIKPQMLIGAGNTSQSTHMTQKDQQEVIQE 426
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV--ILL 228
FR G + L+ATSV EEGLDI + ++V+ + + I MVQ GR R G+ V L
Sbjct: 427 FRDGILSLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQ---ARGRARAGQSVYSFLA 483
Query: 229 TQG 231
T+G
Sbjct: 484 TEG 486
>gi|146181280|ref|XP_001022468.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|146144241|gb|EAS02223.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 749
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 43/212 (20%)
Query: 29 FHVTHSLASA----LENLVTYGLRSFYNNLVEVSKEDGSCPI-LGKDNDLQNLLQQLKPK 83
F VTH ++ LE L LRSF C I +G+ D + ++Q+
Sbjct: 527 FRVTHLFSATMPPNLERLAKKYLRSF-------------CYISIGEAGDAKKDIEQI--- 570
Query: 84 LDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPL 143
++ MS S RL++ILE+ +IIFAN + V ++ +L
Sbjct: 571 --VDFMSEGQKKS-----RLQKILETA---------KPPIIIFANEKTAVEKLSKILDRW 614
Query: 144 EPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQ 203
V G TQQ+++ + F+ G+++ L+AT +G GL + + +VI FDA
Sbjct: 615 -----GWQNVIYHGGKTQQQREAAVDGFKKGKYDILVATDLGARGLHVDGVKMVINFDAP 669
Query: 204 KSPIKMVQRLGRTGRK-RNGRCVILLTQGREA 234
K+ + R GRTGR + G +T EA
Sbjct: 670 KNIKDFIHRTGRTGRAGKRGIAYTFVTNHNEA 701
>gi|66804721|ref|XP_636093.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
gi|60464394|gb|EAL62541.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
Length = 2417
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 115 AEKGETTK---VIIFANYRVVVAEIFDVLK--PLEPMVKASMFVGQSS--GVTQQEQKEI 167
A GE K +++F R + + +LK P + + VG + G+ ++Q+ I
Sbjct: 645 ASDGELQKDLRILVFVETRFGASNLTSMLKKEPFQEYLHTKRLVGHNGVDGMDSEKQQSI 704
Query: 168 MKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVIL 227
++KFR G+ ++ T+V EEG+D+ + ++VIC+D S ++QR GR K + +I+
Sbjct: 705 IRKFRDGKCRLIVTTNVLEEGIDVQDCNIVICYDGILSLKSLIQRRGRARSKNESKFIII 764
Query: 228 LTQGRE 233
++
Sbjct: 765 YNDDKD 770
>gi|351694555|gb|EHA97473.1| Interferon-induced helicase C domain-containing protein 1
[Heterocephalus glaber]
Length = 1026
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 144 EPMVKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVI 198
E VKA +G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E +++I
Sbjct: 747 EVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIII 806
Query: 199 CFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
+ + I MVQ GR R V++ G
Sbjct: 807 RYGLVTNEIAMVQARGR-ARAEESTYVLVAHSG 838
>gi|322700444|gb|EFY92199.1| Dicer-like protein 2 [Metarhizium acridum CQMa 102]
Length = 1441
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 150 SMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKM 209
S +GQSS +Q ++ FR+G+ N LIATSV EEG+D+ ++VICFD +P
Sbjct: 488 SELIGQSS-----DQMAALQSFRSGKINILIATSVLEEGIDVPACNMVICFDHPATPKSF 542
Query: 210 VQRLGRTGRKRNGRCVIL 227
VQR GR R + + ++L
Sbjct: 543 VQRRGR-ARMKESKLILL 559
>gi|145501031|ref|XP_001436498.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403638|emb|CAK69101.1| unnamed protein product [Paramecium tetraurelia]
Length = 553
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 110 HFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMK 169
H+ L + K T V+IF+ ++ V +I + L ++K VG G Q+++ + +K
Sbjct: 349 HYLLDSLKKTTPPVVIFSEHQNDVDDINEYL-----LIKGVEVVGLHGGKQQEDRTKALK 403
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILL 228
+F G+ + L+AT V +GLD +I VI +D K + R+GRTGR+ + GR +
Sbjct: 404 QFLNGQKDVLVATDVAAKGLDFPDIKHVINYDMPKDIESYIHRIGRTGRQGKTGRATTFV 463
Query: 229 TQGRE 233
+ +E
Sbjct: 464 NRQQE 468
>gi|449457995|ref|XP_004146733.1| PREDICTED: dicer-like protein 4-like [Cucumis sativus]
Length = 1657
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMV--KASMFVGQS 156
K +RL IL S FR + K IIF N V+ + +L+ L + K VG
Sbjct: 403 KLLRLIGILSS-FR----QQLNMKCIIFVNRIVIARSLSYILQNLNFLAYWKCDFLVGVH 457
Query: 157 SGVTQQEQK---EIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
S + +K I+ KFR+GE N LIAT VGEEGLDI LVI FD ++ +Q
Sbjct: 458 SKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSR 517
Query: 214 GRTGRKRNGRCVILLTQGRE 233
GR R L+ G E
Sbjct: 518 GR-ARMPQSEYAFLVDSGNE 536
>gi|70608133|ref|NP_084426.2| probable ATP-dependent RNA helicase DHX58 [Mus musculus]
gi|341940441|sp|Q99J87.2|DHX58_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DHX58; AltName:
Full=Probable ATP-dependent helicase LGP2; AltName:
Full=Protein D11Lgp2; AltName: Full=RIG-I-like receptor
3; Short=RLR-3; AltName: Full=RIG-I-like receptor Lgp2;
Short=RLR
Length = 678
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 16/123 (13%)
Query: 121 TKVIIFANYRVVVAEIFDVLKPLEPM-----VKASMFVG-----QSSGVTQQEQKEIMKK 170
T+ IIF R + + L+ +P +K M +G QS+ +TQ++Q+E++++
Sbjct: 368 TRGIIFTRTRQTASSLLLWLRQ-QPCLQTVGIKPQMLIGAGNTSQSTHMTQKDQQEVIQE 426
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCV--ILL 228
FR G + L+ATSV EEGLDI + ++V+ + + I MVQ GR R G+ V L
Sbjct: 427 FRDGILSLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQ---ARGRARAGQSVYSFLA 483
Query: 229 TQG 231
T+G
Sbjct: 484 TEG 486
>gi|255565079|ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
gi|223537239|gb|EEF38871.1| Ribonuclease III, putative [Ricinus communis]
Length = 1633
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 99 KFIRLREILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMV--KASMFVGQS 156
K +RL IL S FRL K I+F N V + VL+ L+ ++ K VG
Sbjct: 396 KLLRLIGIL-STFRLQP----NMKGIVFVNRIVTARSLSYVLQNLKFLISWKCDFLVGVH 450
Query: 157 SGVTQQEQK---EIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
SG+ +K I++KF+ G+ N LIAT VGEEGLDI LV+ FD ++ +Q
Sbjct: 451 SGLKSMSRKTMNSILEKFKTGKLNLLIATKVGEEGLDIQTCCLVVRFDLPETVASFIQSR 510
Query: 214 GRT 216
GR
Sbjct: 511 GRA 513
>gi|348585927|ref|XP_003478722.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Cavia porcellus]
Length = 1022
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 147 VKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFD 201
+KA +G +TQ EQKE++ KFR G+ N LIAT+V EEGLDI E +++I +
Sbjct: 746 IKAHHLIGAGHSSEFKHMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIIIRYS 805
Query: 202 AQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
+ I MVQ GR R V++ G
Sbjct: 806 LVTNEIAMVQARGR-ARAEESTYVLVAHSG 834
>gi|429758832|ref|ZP_19291345.1| putative cold-shock DEAD-box protein A [Actinomyces sp. oral taxon
181 str. F0379]
gi|429173046|gb|EKY14583.1| putative cold-shock DEAD-box protein A [Actinomyces sp. oral taxon
181 str. F0379]
Length = 662
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 114 HAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRA 173
H E+ I+F R+ V EI LE + G S V Q E++ ++++ +
Sbjct: 251 HQSAQESDAAIVFVRTRLDVEEI-----ALELNSRGFKAAGISGDVAQTERERMVERLKN 305
Query: 174 GEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLT 229
G + L+AT V GLD+ I LV+ FD + V R+GRTGR R GR + T
Sbjct: 306 GSLDVLVATDVAARGLDVERIGLVVNFDVPREAEAYVHRIGRTGRAGREGRSLTFFT 362
>gi|296923414|emb|CAZ27718.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Oncorhynchus mykiss]
Length = 677
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 13/173 (7%)
Query: 68 GKDNDLQNLLQQLKPKLDINIMSSEYAWSHLKFIRLREILESHFRLHAEKGETTKVIIFA 127
G D L L Q+ ++++ +S + + + K +L+ L F +G ++ I+F+
Sbjct: 324 GTDFFLLGLYQE--NEVELRKLSGDARFENPKMGKLQNTLLEQFV----QGGHSRGILFS 377
Query: 128 NYRVVVAEIFDVLKPLEPM----VKASMFVGQSSGV---TQQEQKEIMKKFRAGEFNTLI 180
R + ++D + + ++A++ G +G+ TQ EQK+ ++ FR G N LI
Sbjct: 378 KTRKSICCLYDWVSNNPALQRAGIRAAILTGAGNGINYMTQNEQKDTIRNFRLGSLNLLI 437
Query: 181 ATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGRE 233
+TSV EEGLDI E +LV+ + + I Q GR + V+ GRE
Sbjct: 438 STSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARASDSVYSVVAQAGGRE 490
>gi|195131547|ref|XP_002010212.1| GI14822 [Drosophila mojavensis]
gi|193908662|gb|EDW07529.1| GI14822 [Drosophila mojavensis]
Length = 963
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 118 GETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFN 177
G + K+IIF ++ V +I +++ E V S+ +S Q E+ ++K FR G+ N
Sbjct: 487 GGSNKIIIFVETKIKVEDILQIIR-NEGYVATSIHGDKS----QSERDSVLKDFRNGKSN 541
Query: 178 TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
LIAT V GLD+ ++ VI +D S V R+GRTGR
Sbjct: 542 ILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGR 582
>gi|183221518|ref|YP_001839514.1| ATP-dependent RNA helicase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911602|ref|YP_001963157.1| superfamily II DNA and RNA helicase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167776278|gb|ABZ94579.1| Superfamily II DNA and RNA helicase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167779940|gb|ABZ98238.1| ATP-dependent RNA helicase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 529
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 29/224 (12%)
Query: 124 IIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIATS 183
IIF NY++ + +I L+ G SS + Q+++ +++ F+AG++ LIAT
Sbjct: 247 IIFTNYKMNIPKIVSALRRF-----GITATGLSSELDQKKRIRLLRDFKAGKYKYLIATD 301
Query: 184 VGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLTQGREAHNFQTSMQ 242
V G+DI ID+V +D + V R+GRT R R G+ + ++ +
Sbjct: 302 VASRGIDIENIDVVYNYDLPQDAENYVHRIGRTARAGRKGQSIGFCSE---------TDY 352
Query: 243 TCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPAKPSKKKPKENE 302
T +EK +N+K A + + TP V D V P +KK ++ E
Sbjct: 353 TELERIEKYLNSKIPVAEIREEYLEFPKGEFTP-------VFADEVIPG---EKKYQDRE 402
Query: 303 KANKKSK----KKLETDGNSEPAGKQNKTNAKKTKKQPMMTQSN 342
+ + K ++ E +G +N+ K P S+
Sbjct: 403 RGGRGGKPRQGERGERGSGEHRSGDRNRHKGKTGGGHPPAKMSH 446
>gi|403339941|gb|EJY69232.1| hypothetical protein OXYTRI_10149 [Oxytricha trifallax]
Length = 1032
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 26/228 (11%)
Query: 118 GETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFN 177
G+ +V+IFAN + + + K L P+ K TQ ++ I+ K R GE N
Sbjct: 501 GKGGQVLIFANQ---IQTVEGLEKDLAPVFKNKGLACLHGDKTQFDRTHIIDKVRKGEVN 557
Query: 178 TLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNF 237
LI+T+V GLDI I VI +D K + R+GRTGR + V A+
Sbjct: 558 ILISTNVASRGLDIPTIKTVINYDCAKDKEDHIHRIGRTGRAGDKEGV--------AYTL 609
Query: 238 QTSMQTCK-SYVEKIINNKSIYAN-----LAKNGPRMIPAHVTPRIKCLHIVVKDRVTPA 291
T +T K + + KI+ N + + LA + + VT +K ++ ++ A
Sbjct: 610 ITKNETGKAAMLVKILENSNQVVSEELEQLAMSDGGFRKSRVTIGVKNFNM----KINIA 665
Query: 292 KPSKKKPKENEKANKK-----SKKKLETDGNSEPAGKQNKTNAKKTKK 334
K K+ K K + SK + GNS+ G NK +A++ K+
Sbjct: 666 KEQKEMKKNARKIGDRTGIGFSKSDKKNGGNSDEDGNGNKMSAQQKKR 713
>gi|148643558|ref|YP_001274071.1| helicase [Methanobrevibacter smithii ATCC 35061]
gi|222444945|ref|ZP_03607460.1| hypothetical protein METSMIALI_00561 [Methanobrevibacter smithii
DSM 2375]
gi|261350482|ref|ZP_05975899.1| ATP-dependent RNA helicase DeaD [Methanobrevibacter smithii DSM
2374]
gi|148552575|gb|ABQ87703.1| helicase [Methanobrevibacter smithii ATCC 35061]
gi|222434510|gb|EEE41675.1| DEAD/DEAH box helicase [Methanobrevibacter smithii DSM 2375]
gi|288861264|gb|EFC93562.1| ATP-dependent RNA helicase DeaD [Methanobrevibacter smithii DSM
2374]
Length = 429
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%)
Query: 154 GQSSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRL 213
G + Q+ + ++M KFR G LIAT V G+D+ +++V+ +D ++P V R+
Sbjct: 272 GIHGDMNQKSRDKVMNKFRNGNIEILIATDVAARGIDVPNVEVVVNYDVPQNPEYYVHRI 331
Query: 214 GRTGRKRNGRCVILLTQGREAHNFQTSMQTCKSYVEK 250
GRTGR N G+E ++ +T + KS +++
Sbjct: 332 GRTGRAGNMGYAFTFVAGKEIYSLRTIKKVTKSKIKQ 368
>gi|359407094|ref|ZP_09199729.1| DEAD/DEAH box helicase [Prevotella stercorea DSM 18206]
gi|357553742|gb|EHJ35483.1| DEAD/DEAH box helicase [Prevotella stercorea DSM 18206]
Length = 599
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 10/126 (7%)
Query: 106 ILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQK 165
I++ FR KG+ +VIIF+ + V I L+ ++ + M S + Q E+
Sbjct: 235 IVKDLFR----KGDLNRVIIFSGKKQKVKAINRTLQQMK-INSGEMH----SDLEQAERD 285
Query: 166 EIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR-KRNGRC 224
+I+ KF+ G+ + L+AT + G+DI +I +VI FD P V R+GRT R +R+G
Sbjct: 286 DILYKFKTGQIDVLVATDIVARGIDIDDIAMVINFDVPHDPEDYVHRIGRTARAQRDGIA 345
Query: 225 VILLTQ 230
+ +++
Sbjct: 346 ITFVSE 351
>gi|302800610|ref|XP_002982062.1| hypothetical protein SELMODRAFT_421514 [Selaginella moellendorffii]
gi|300150078|gb|EFJ16730.1| hypothetical protein SELMODRAFT_421514 [Selaginella moellendorffii]
Length = 497
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS---GVTQQEQKEIMKKFRAGEFNT 178
+ I+F RV+ A++ +L P V+A + G+T Q+ ++ FRAG+ N
Sbjct: 320 RCIVFVE-RVIAAKVLTLLLNSRPYVRAQCVASHRNKLKGLTLATQRNSLEDFRAGKANV 378
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
++AT+V EEGLDI LVI F+ K+ +Q GR RK+ VIL+ G
Sbjct: 379 IVATNVAEEGLDIQSCSLVIRFNMPKTERSSIQSRGR-ARKQGSDYVILMESG 430
>gi|312130721|ref|YP_003998061.1| dead/deah box helicase domain-containing protein [Leadbetterella
byssophila DSM 17132]
gi|311907267|gb|ADQ17708.1| DEAD/DEAH box helicase domain protein [Leadbetterella byssophila
DSM 17132]
Length = 400
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNT 178
E K+IIF + R ++ +I L +KA G SS + Q E++ ++ F+AG+FN
Sbjct: 241 EGQKIIIFTSQRSMIHKILKDLS--RNKLKAK---GVSSDIEQDEREVALRDFKAGKFNI 295
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRN-GRCVILLTQGREAHNF 237
L+AT V G+DI ++LV+ FD + + R+GRT R G + LT+
Sbjct: 296 LVATDVLSRGIDISNLNLVVNFDVPRDAEDYIHRIGRTARADTEGVSITFLTEKD----- 350
Query: 238 QTSMQTCKSYVEKIINNKSIYANLAKNGP 266
+ +++ ++ +EK + + I NL GP
Sbjct: 351 RKAVKDIEALLEKEVEVQRITENLGL-GP 378
>gi|429847845|gb|ELA23398.1| dicer-like protein 2 [Colletotrichum gloeosporioides Nara gc5]
Length = 1453
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 124 IIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQK-------------EIMKK 170
I+FA R VA + +L E + +A VG G +Q + + + + +
Sbjct: 436 IVFAKERATVAVLGHLLTSHEAL-RAKYRVGAMMGTSQYQARKRDIWDLSRTEDLQSLHQ 494
Query: 171 FRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQ 230
FR+G+ N LIATSV EEG+D+ +LVICFD + +QR GR R R+ + ++LL +
Sbjct: 495 FRSGKINLLIATSVLEEGIDVPACNLVICFDRPPNLKSFIQRRGR-ARMRDSKLLMLLDR 553
Query: 231 GREAHNFQTSMQT 243
SM+
Sbjct: 554 SETFSQEWESMEA 566
>gi|296812107|ref|XP_002846391.1| dicer-like protein 2 [Arthroderma otae CBS 113480]
gi|238841647|gb|EEQ31309.1| dicer-like protein 2 [Arthroderma otae CBS 113480]
Length = 1437
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 113 LHAEKGETTKVIIFANYRVVVAEIFDVLK--PLEPMVKASMFVGQS------SGVTQ--- 161
L +E T++ IIF R + ++ P +K+ F+G S S +T+
Sbjct: 416 LSSEHTGTSRGIIFVEQRATAVMLTHLISQHPKLTHIKSDYFLGNSAFAARKSDITELSK 475
Query: 162 -QEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKR 220
+ K+ + ++G+ N L+ATSV EEG+D+ DLV+CFD K VQR GR RK
Sbjct: 476 PGDMKDSINDLKSGKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRGR-ARKA 534
Query: 221 NGRCVIL 227
N + VI
Sbjct: 535 NSKYVIF 541
>gi|308455475|ref|XP_003090271.1| hypothetical protein CRE_17660 [Caenorhabditis remanei]
gi|308265015|gb|EFP08968.1| hypothetical protein CRE_17660 [Caenorhabditis remanei]
Length = 637
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 160 TQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK 219
++Q+Q E ++KF +GE L+ATSV EEGLDI + +LVI ++ + I VQR GR GR
Sbjct: 436 SKQKQMEKLRKFASGEIRVLVATSVAEEGLDIAKCNLVIKYNYATNEIAHVQRRGR-GRA 494
Query: 220 RNGRCVIL 227
N +C+++
Sbjct: 495 INSKCILI 502
>gi|282860072|ref|ZP_06269153.1| ATP-dependent RNA helicase DeaD family protein [Prevotella bivia
JCVIHMP010]
gi|424899483|ref|ZP_18323025.1| DNA/RNA helicase, superfamily II [Prevotella bivia DSM 20514]
gi|282587160|gb|EFB92384.1| ATP-dependent RNA helicase DeaD family protein [Prevotella bivia
JCVIHMP010]
gi|388591683|gb|EIM31922.1| DNA/RNA helicase, superfamily II [Prevotella bivia DSM 20514]
Length = 589
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 42/236 (17%)
Query: 105 EILESHFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQE 163
EI++ F+ G+ +VIIF+ + V +I L + + G+ S + Q +
Sbjct: 234 EIIKDIFKA----GDLHRVIIFSGSKQKVKQIASSLN------RKHINCGEMHSDLDQAQ 283
Query: 164 QKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGR 223
+ ++M KF++G+ + L+AT + G+DI +I +VI +D V R+GRT R
Sbjct: 284 RDDVMFKFKSGQIDVLVATDIVARGIDIDDITMVINYDVPHDVEDYVHRIGRTARADRDG 343
Query: 224 CVILLTQGREAHNFQTSMQTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPRIKCLHIV 283
I G + + F Q +S++EK I + L +
Sbjct: 344 VAITFVNGDDIYYF----QQIESFLEKTIEKNRLPEALGEG------------------- 380
Query: 284 VKDRVTPAKPSKKKPKENEKANKKSKKKLETDGNSEPAGKQNKTNAKKTKKQPMMT 339
P S +P +N+KA K++++ + D S K N K ++QP T
Sbjct: 381 ------PEYKSNGRPSKNKKA--KNRRRHDRDQQSHKDKKSNYRRVKNRQEQPAPT 428
>gi|301607421|ref|XP_002933320.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Xenopus (Silurana) tropicalis]
Length = 998
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 136 IFDVLKPLEPMVKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLD 190
I D K E +++S +G +TQ EQK+I+ KF GE N L+ATSV EEGLD
Sbjct: 709 ISDNEKFTEVGIRSSYLIGAGHNSDFKPMTQNEQKQIIHKFSTGELNLLVATSVAEEGLD 768
Query: 191 IGEIDLVICFDAQKSPIKMVQRLGRT 216
I E ++VI + + I MVQ GR
Sbjct: 769 IKECNVVIRYGLVTNEIAMVQARGRA 794
>gi|444705708|gb|ELW47101.1| Interferon-induced helicase C domain-containing protein 1 [Tupaia
chinensis]
Length = 879
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 143 LEPMVKASMFVGQSSG-----VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLV 197
E VKA +G +TQ EQ+E++ KFR G+ N LIAT+V EEGLDI E ++V
Sbjct: 600 FEVGVKAHHLIGAGHSSEFKPMTQNEQREVISKFRTGKINLLIATTVAEEGLDIKECNIV 659
Query: 198 ICFDAQKSPIKMVQRLGRT 216
I + + I MVQ GR
Sbjct: 660 IRYGLVTNEIAMVQARGRA 678
>gi|329906289|ref|ZP_08274385.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
gi|327547309|gb|EGF32148.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
Length = 504
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
+V++F+N ++ + + L+ + VKAS G TQ E+ ++ F+ GE + L+A
Sbjct: 265 QVLVFSNTKIGASRLARELE--KGGVKASAIHGDK---TQSERMAALEAFKGGEIDVLVA 319
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
T V GLDI ++ VI +D + V R+GRTGR I L F T
Sbjct: 320 TDVAARGLDISDLPCVINYDLPYNAEDYVHRIGRTGRAGASGDAISL--------FTTKD 371
Query: 242 QTCKSYVEKIINNKSIYANLAKNGPRMIPAHVTPR 276
+ +EK+IN+K + A L P + A PR
Sbjct: 372 ERLLLDIEKLINHKFVPAELVGYTPPVERAERRPR 406
>gi|357059925|ref|ZP_09120700.1| hypothetical protein HMPREF9332_00257 [Alloprevotella rava F0323]
gi|355377113|gb|EHG24347.1| hypothetical protein HMPREF9332_00257 [Alloprevotella rava F0323]
Length = 421
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
+VIIF + + V E+ +LK +A S + QQ++ E+M KF++G + L+A
Sbjct: 252 RVIIFCSSKQKVKELHILLKRAHFNCEA-----MHSDLLQQQRDEVMLKFKSGHTDILVA 306
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILLTQ 230
T + G+DI +I +VI +DA + V R+GRT R RNG V L+ +
Sbjct: 307 TDIVARGIDINDIQMVINYDAPRDAEDYVHRIGRTARAGRNGIAVTLVGE 356
>gi|302766077|ref|XP_002966459.1| hypothetical protein SELMODRAFT_407400 [Selaginella moellendorffii]
gi|300165879|gb|EFJ32486.1| hypothetical protein SELMODRAFT_407400 [Selaginella moellendorffii]
Length = 497
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSS---GVTQQEQKEIMKKFRAGEFNT 178
+ I+F RV+ A++ +L P V+A + G+T Q+ ++ FRAG+ N
Sbjct: 320 RCIVFVE-RVIAAKVLTLLLNSRPYVRAQCVASHRNKLKGLTLATQRNSLEDFRAGKANV 378
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQG 231
++AT+V EEGLDI LVI F+ K+ +Q GR RK+ VIL+ G
Sbjct: 379 IVATNVAEEGLDIQSCSLVIRFNMPKTERSSIQSRGR-ARKQGSDYVILMESG 430
>gi|332159041|ref|YP_004424320.1| putative DNA repair RAD25 [Pyrococcus sp. NA2]
gi|331034504|gb|AEC52316.1| putative protein DNA repair protein RAD25 [Pyrococcus sp. NA2]
Length = 732
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 119 ETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNT 178
E VI+F + + E DV+ L + + V +S +++ E+ +++K+ + G +
Sbjct: 308 ELKPVIVFTSRKATAYEFKDVIVKLLGFSQDRVEV-LTSDMSKDERLDLIKRVKEGLVDI 366
Query: 179 LIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR----KRNGRCVILLT-QGRE 233
+I+T VGEEG+DI E L++ D KSP++ QRLGR R +R VI +T + RE
Sbjct: 367 IISTLVGEEGVDIPEAGLLVMTDIPKSPLRFYQRLGRLIRVASPRRIKYLVISMTPKTRE 426
Query: 234 AHNFQTSMQTCKSYVEKIINNKSIYANLAKNGP 266
++ + ++ Y E + + IY NL + GP
Sbjct: 427 YYSLEEALWNL--YSEGVDVSYIIY-NLGEKGP 456
>gi|317143933|ref|XP_001819794.2| ATP-dependent RNA helicase dbp8 [Aspergillus oryzae RIB40]
Length = 523
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 110 HFRLHAEKGETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMK 169
H L E+ T IIF N+ + +L+ L V + S + Q E+ +
Sbjct: 338 HVLLSTERNSTKPAIIFCNHTKTADLLERMLRRLSHRVTS-----LHSLLPQSERNSNLA 392
Query: 170 KFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRK-RNGRCVILL 228
+FRA L+AT V GLDI + LVI FD ++P V R+GRT R R+G V L+
Sbjct: 393 RFRASAARILVATDVASRGLDIPSVSLVINFDVPRNPDDYVHRVGRTARAGRHGEAVTLV 452
Query: 229 TQ 230
Q
Sbjct: 453 GQ 454
>gi|374705810|ref|ZP_09712680.1| DEAD/DEAH box helicase [Pseudomonas sp. S9]
Length = 449
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K IIF N RV ++ K + VKA + G+ Q+++K + + R G L+A
Sbjct: 244 KAIIFTNTRVQADRLYG--KLVAKDVKAFVLHGEKD---QKDRKLAIDRLRQGAVKVLVA 298
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
T V GLD+ +DLVI FD +S + V R+GRTGR I L HN M
Sbjct: 299 TDVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGGEGLAISLI----CHNDWNLM 354
Query: 242 QTCKSYVEKIINNKSI 257
+ + Y+++ ++I
Sbjct: 355 SSIERYLKQRFERRNI 370
>gi|373500494|ref|ZP_09590875.1| hypothetical protein HMPREF9140_00993 [Prevotella micans F0438]
gi|371953428|gb|EHO71253.1| hypothetical protein HMPREF9140_00993 [Prevotella micans F0438]
Length = 531
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 20/233 (8%)
Query: 118 GETTKVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQ-SSGVTQQEQKEIMKKFRAGEF 176
G+ +VIIF+ + V +I L + + GQ S + Q E+ E+M +F++G+
Sbjct: 243 GDLKRVIIFSGSKQKVKQIAQSLN------QKQINCGQMHSDLEQAERDEMMFRFKSGQI 296
Query: 177 NTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHN 236
+ L+AT + G+DI +I +VI +D V R+GRT R I + +
Sbjct: 297 DVLVATDILARGIDIDDIAMVINYDGPHDAEDYVHRIGRTARADRDGVAITFVNDDDIYF 356
Query: 237 FQTSMQTCKSYVEKIINNKSI-----YANLAKNGPRMIPAHVTPRIKCLHIVVKDRVTPA 291
FQ + VEK+ +S+ Y A R A R KD T
Sbjct: 357 FQQIEKFLGREVEKMPLPESLGKGPDYTQQATKPKRSGDARSRRRKAREQQSHKD--TKQ 414
Query: 292 KPSKKKPKENEKANKKSKKKLETDGNSEPAGKQNKTNAKKTKKQPMMTQSNDI 344
+ + +P+++ K++K++++K NS K A+ K+QP SN I
Sbjct: 415 RSRRNRPQDSHKSDKQTEEKKSETRNS------RKRPARNEKQQPQRQPSNQI 461
>gi|229591936|ref|YP_002874055.1| ATP-dependent RNA helicase [Pseudomonas fluorescens SBW25]
gi|229363802|emb|CAY51237.1| ATP-dependent RNA helicase [Pseudomonas fluorescens SBW25]
Length = 456
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 122 KVIIFANYRVVVAEIFDVLKPLEPMVKASMFVGQSSGVTQQEQKEIMKKFRAGEFNTLIA 181
K I+F N R I+ L E KA + G+ Q+++K + + +AG L+A
Sbjct: 253 KAIVFTNTRAAADRIYGRLVAQE--YKAFVLHGEKD---QKDRKLAIDRLKAGGVKILVA 307
Query: 182 TSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGRKRNGRCVILLTQGREAHNFQTSM 241
T V GLD+ +DLVI FD +S + V R+GRTGR N I L H M
Sbjct: 308 TDVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLI----CHGDWNLM 363
Query: 242 QTCKSYVEKIINNKSI 257
+ + Y+++ ++I
Sbjct: 364 SSIERYLKQSFERRTI 379
>gi|374995988|ref|YP_004971487.1| DNA/RNA helicase [Desulfosporosinus orientis DSM 765]
gi|357214354|gb|AET68972.1| DNA/RNA helicase, superfamily II [Desulfosporosinus orientis DSM
765]
Length = 536
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 159 VTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMVQRLGRTGR 218
++QQ++ +MK+FR G+ L+AT V GLDI + VI FD + P+ V R+GRTGR
Sbjct: 280 LSQQQRDRVMKRFRDGKSELLVATDVAARGLDINNVTHVINFDIPQDPVSYVHRIGRTGR 339
Query: 219 -KRNGRCVILLT 229
R G+ + L++
Sbjct: 340 VGRKGQAITLIS 351
>gi|392567716|gb|EIW60891.1| hypothetical protein TRAVEDRAFT_146565 [Trametes versicolor
FP-101664 SS1]
Length = 1459
Score = 63.5 bits (153), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 102 RLREILESHFRLHAEKGETTKVIIFANYRVV---VAEIFDVLKPLEPMVKASMFVGQ--- 155
++R++ E+ F + + + + IIF R V +A I + + L ++K+ VG
Sbjct: 361 KVRKLAETLFERYTD---SFQGIIFVEQRHVATCLAVILERIPLLAHVIKSEQLVGHGKD 417
Query: 156 -----SSGVTQQEQKEIMKKFRAGEFNTLIATSVGEEGLDIGEIDLVICFDAQKSPIKMV 210
+ G+ + Q++ +K FR N L+ATSV EEGLD DLVI FD + + V
Sbjct: 418 TAKAHTKGMGTRNQQDTVKMFRERAINVLVATSVAEEGLDFPACDLVIRFDPVQHMVGYV 477
Query: 211 QRLGRTGRKRNGRCVILLTQGREAH 235
Q GR R + +I+L +G +A
Sbjct: 478 QSRGR-ARHKTSTFIIMLQEGAQAQ 501
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,711,634,845
Number of Sequences: 23463169
Number of extensions: 230191486
Number of successful extensions: 1166250
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 27823
Number of HSP's successfully gapped in prelim test: 10380
Number of HSP's that attempted gapping in prelim test: 1119572
Number of HSP's gapped (non-prelim): 50737
length of query: 395
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 251
effective length of database: 8,980,499,031
effective search space: 2254105256781
effective search space used: 2254105256781
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)