BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4154
(346 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y383|LC7L2_HUMAN Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens GN=LUC7L2
PE=1 SV=2
Length = 392
Score = 307 bits (786), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 151/242 (62%), Positives = 181/242 (74%), Gaps = 33/242 (13%)
Query: 16 GESNKYNVKFFDSKVCKSFLLTCCPHEILSSTRMDLGECPKIHDLALRADYEKASKNRDY 75
G++ + +KF D +VCKS LL CCPH++LS TRMD
Sbjct: 21 GDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMD------------------------- 55
Query: 76 YYDIDRMDLGECPKIHDLALRADYEKASKNRDYYYDIDAMEHLQAFISDCDRRTELAKQR 135
LGEC K+HDLALRADYE ASK +D+++++DAM+HLQ+FI+DCDRRTE+AK+R
Sbjct: 56 --------LGECLKVHDLALRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKR 107
Query: 136 LLETQEVLSAEVAEKANAVHQLAEDIGKKLAKAEELGAEGFVEESLKLMTEIEDLRKKKA 195
L ETQE +SAEVA KA VH+L E+IGK LAK E+LGAEG VEES K+M E+E R KK
Sbjct: 108 LAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKR 167
Query: 196 EAEDTYRNSMPASSYQQQKLRVCEVCSAYLGIHDNDRRLADHFGGKLHLGFIKIREKLAE 255
EAE+ YRNSMPASS+QQQKLRVCEVCSAYLG+HDNDRRLADHFGGKLHLGFI+IREKL E
Sbjct: 168 EAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEE 227
Query: 256 LQ 257
L+
Sbjct: 228 LK 229
Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 64/76 (84%)
Query: 255 ELQAMEHLQAFISDCDRRTELAKQRLLETQEVLSAEVAEKANAVHQLAEDIGKKLAKAEE 314
EL AM+HLQ+FI+DCDRRTE+AK+RL ETQE +SAEVA KA VH+L E+IGK LAK E+
Sbjct: 83 ELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQ 142
Query: 315 LGAEGFVEESLKLMTE 330
LGAEG VEES K+M E
Sbjct: 143 LGAEGNVEESQKVMDE 158
>sp|Q7TNC4|LC7L2_MOUSE Putative RNA-binding protein Luc7-like 2 OS=Mus musculus GN=Luc7l2
PE=1 SV=1
Length = 392
Score = 306 bits (785), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/242 (61%), Positives = 181/242 (74%), Gaps = 33/242 (13%)
Query: 16 GESNKYNVKFFDSKVCKSFLLTCCPHEILSSTRMDLGECPKIHDLALRADYEKASKNRDY 75
G++ + +KF D +VCKS LL CCPH++LS TRMD
Sbjct: 21 GDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMD------------------------- 55
Query: 76 YYDIDRMDLGECPKIHDLALRADYEKASKNRDYYYDIDAMEHLQAFISDCDRRTELAKQR 135
LGEC K+HDLALRADYE ASK +D+++++DAM+HLQ+FI+DCDRRTE++K+R
Sbjct: 56 --------LGECLKVHDLALRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVSKKR 107
Query: 136 LLETQEVLSAEVAEKANAVHQLAEDIGKKLAKAEELGAEGFVEESLKLMTEIEDLRKKKA 195
L ETQE +SAEVA KA VH+L E+IGK LAK E+LGAEG VEES K+M E+E R KK
Sbjct: 108 LAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKR 167
Query: 196 EAEDTYRNSMPASSYQQQKLRVCEVCSAYLGIHDNDRRLADHFGGKLHLGFIKIREKLAE 255
EAE+ YRNSMPASS+QQQKLRVCEVCSAYLG+HDNDRRLADHFGGKLHLGFI+IREKL E
Sbjct: 168 EAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEE 227
Query: 256 LQ 257
L+
Sbjct: 228 LK 229
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 64/76 (84%)
Query: 255 ELQAMEHLQAFISDCDRRTELAKQRLLETQEVLSAEVAEKANAVHQLAEDIGKKLAKAEE 314
EL AM+HLQ+FI+DCDRRTE++K+RL ETQE +SAEVA KA VH+L E+IGK LAK E+
Sbjct: 83 ELDAMDHLQSFIADCDRRTEVSKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQ 142
Query: 315 LGAEGFVEESLKLMTE 330
LGAEG VEES K+M E
Sbjct: 143 LGAEGNVEESQKVMDE 158
>sp|Q9NQ29|LUC7L_HUMAN Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens GN=LUC7L
PE=1 SV=1
Length = 371
Score = 303 bits (777), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/242 (61%), Positives = 181/242 (74%), Gaps = 33/242 (13%)
Query: 16 GESNKYNVKFFDSKVCKSFLLTCCPHEILSSTRMDLGECPKIHDLALRADYEKASKNRDY 75
G+ + VKF D +VCKS LL CCPH+IL+ TRMD
Sbjct: 21 GDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMD------------------------- 55
Query: 76 YYDIDRMDLGECPKIHDLALRADYEKASKNRDYYYDIDAMEHLQAFISDCDRRTELAKQR 135
LGEC KIHDLALRADYE ASK RD ++++DAM+HL++FI++CDRRTELAK+R
Sbjct: 56 --------LGECTKIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKR 107
Query: 136 LLETQEVLSAEVAEKANAVHQLAEDIGKKLAKAEELGAEGFVEESLKLMTEIEDLRKKKA 195
L ETQE +SAEV+ KA VH+L E+IGK LAKAE+LGAEG V+ES K++ E+E +R KK
Sbjct: 108 LAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKK 167
Query: 196 EAEDTYRNSMPASSYQQQKLRVCEVCSAYLGIHDNDRRLADHFGGKLHLGFIKIREKLAE 255
EAE+ YRNSMPASS+QQQKLRVCEVCSAYLG+HDNDRRLADHFGGKLHLGFI+IREKL +
Sbjct: 168 EAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQ 227
Query: 256 LQ 257
L+
Sbjct: 228 LR 229
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 68/83 (81%)
Query: 248 KIREKLAELQAMEHLQAFISDCDRRTELAKQRLLETQEVLSAEVAEKANAVHQLAEDIGK 307
K R+ EL AM+HL++FI++CDRRTELAK+RL ETQE +SAEV+ KA VH+L E+IGK
Sbjct: 76 KERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGK 135
Query: 308 KLAKAEELGAEGFVEESLKLMTE 330
LAKAE+LGAEG V+ES K++ E
Sbjct: 136 LLAKAEQLGAEGNVDESQKILME 158
>sp|Q9CYI4|LUC7L_MOUSE Putative RNA-binding protein Luc7-like 1 OS=Mus musculus GN=Luc7l
PE=2 SV=2
Length = 371
Score = 303 bits (776), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/242 (61%), Positives = 181/242 (74%), Gaps = 33/242 (13%)
Query: 16 GESNKYNVKFFDSKVCKSFLLTCCPHEILSSTRMDLGECPKIHDLALRADYEKASKNRDY 75
G+ + VKF D +VCKS LL CCPH+IL+ TRMD
Sbjct: 21 GDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMD------------------------- 55
Query: 76 YYDIDRMDLGECPKIHDLALRADYEKASKNRDYYYDIDAMEHLQAFISDCDRRTELAKQR 135
LGEC KIHDLALRADYE ASK RD ++++DAM+HL++FI++CDRRTELAK+R
Sbjct: 56 --------LGECTKIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKR 107
Query: 136 LLETQEVLSAEVAEKANAVHQLAEDIGKKLAKAEELGAEGFVEESLKLMTEIEDLRKKKA 195
L ETQE +SAEV+ KA VH+L E+IGK LAKAE+LGAEG V+ES K++ E+E +R KK
Sbjct: 108 LAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKK 167
Query: 196 EAEDTYRNSMPASSYQQQKLRVCEVCSAYLGIHDNDRRLADHFGGKLHLGFIKIREKLAE 255
EAE+ YRNSMPASS+QQQKLRVCEVCSAYLG+HDNDRRLADHFGGKLHLGFI+IREKL +
Sbjct: 168 EAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQ 227
Query: 256 LQ 257
L+
Sbjct: 228 LR 229
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 68/83 (81%)
Query: 248 KIREKLAELQAMEHLQAFISDCDRRTELAKQRLLETQEVLSAEVAEKANAVHQLAEDIGK 307
K R+ EL AM+HL++FI++CDRRTELAK+RL ETQE +SAEV+ KA VH+L E+IGK
Sbjct: 76 KERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGK 135
Query: 308 KLAKAEELGAEGFVEESLKLMTE 330
LAKAE+LGAEG V+ES K++ E
Sbjct: 136 LLAKAEQLGAEGNVDESQKILME 158
>sp|Q9USM4|LUC7_SCHPO U1 snRNP-associated protein usp106 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=usp106 PE=1 SV=1
Length = 264
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 125/249 (50%), Gaps = 37/249 (14%)
Query: 13 NFPGESNKYNVKFFDSKVCKSFLLTCCPHEILSSTRMDLGECPKIHDLALRADYEKASKN 72
N +++ V F D KVC+SFL CPH+I ++T+MDLG CPKIH L++DYE+AS +
Sbjct: 16 NLSNFTSRGLVHFTDRKVCRSFLCGICPHDIFTNTKMDLGPCPKIHSDKLKSDYERASYS 75
Query: 73 RDYYYDIDRMDLGECPKIHDLALRADYEKASKNRDYYYDIDAMEHLQAFISDCDRRTELA 132
D Y Y+ D +E L+ + DC++R ++A
Sbjct: 76 HD---------------------------------YGYEWDYLEDLERHVDDCNKRIDIA 102
Query: 133 KQRLLETQEVLSAEVAEKANAVHQLAEDIGKKLAKAEELGAEGFVEESLKLMTEIEDLRK 192
+ E + + E + I + + E L V +++K E+ L+
Sbjct: 103 -EARREKTKEEEERIDELMRDIIHTDHSIEVIITEMEALAKRKLVNDAVKHFIELNRLKT 161
Query: 193 KKAEAED--TYRNSMPA-SSYQQQKLRVCEVCSAYLGIHDNDRRLADHFGGKLHLGFIKI 249
+ E D N +P+ +S QKL+VC++CSAYL DNDRRLADHF GK+HLG+ +
Sbjct: 162 YRKELYDEVISMNEIPSQASTTHQKLQVCDICSAYLSRLDNDRRLADHFSGKMHLGYAML 221
Query: 250 REKLAELQA 258
R +L+A
Sbjct: 222 RNIARDLRA 230
>sp|Q09217|YP68_CAEEL Uncharacterized protein B0495.8 OS=Caenorhabditis elegans
GN=B0495.8 PE=2 SV=1
Length = 313
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 128/236 (54%), Gaps = 38/236 (16%)
Query: 20 KYNVKFFDSKVCKSFLLTCCPHEILSSTRMDLGECPKIHDLALRADYEKASKNRDYYYDI 79
K ++ F VC++FLL CPH+++ +R+
Sbjct: 23 KPSMPFDHHSVCRAFLLGVCPHDMVPDSRL------------------------------ 52
Query: 80 DRMDLGECPKIHDLALRADYEKASKNRDYYYDIDAMEHLQAFISDCDRRTELAKQRLLET 139
++ C K+H+ A +ADYE+A K +D++YD+DA E ++ + D +++L +
Sbjct: 53 --QNVVSCRKVHEPAHKADYERAQKEKDHFYDVDAFEIIEHAVHLVDIEIAKVREKLEDD 110
Query: 140 QEVLSAEVAE-KANAVHQLAEDIGKKLAKAEELGAEGFVEESLKLMTEIEDLRKKKAEAE 198
+ +++ A+ KA V ++ E I K + E+LG EG +EES+KL +E+LR+K E E
Sbjct: 111 VKTQTSQAADSKAKQVAEIEEKIAKNVDDIEKLGNEGKIEESMKLHKYVEELREKIQEIE 170
Query: 199 DT---YRNSMPASSYQQQKLRVCEVCSAYLGIHDNDRRLADHFGGKLHLGFIKIRE 251
D+ + + P S+ KLRVCE C A L I D++ R+ADH+ GK+H+G ++ RE
Sbjct: 171 DSQTEVKTAGPGSN--SAKLRVCEDCGAQLNITDHESRIADHYNGKMHIGMVETRE 224
Score = 31.6 bits (70), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 294 KANAVHQLAEDIGKKLAKAEELGAEGFVEESLKL 327
KA V ++ E I K + E+LG EG +EES+KL
Sbjct: 122 KAKQVAEIEEKIAKNVDDIEKLGNEGKIEESMKL 155
>sp|Q5SUF2|LC7L3_MOUSE Luc7-like protein 3 OS=Mus musculus GN=Luc7l3 PE=1 SV=1
Length = 432
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 128/263 (48%), Gaps = 40/263 (15%)
Query: 13 NFPGESNKYNVKFFDSKVCKSFLLTCCPHEILSSTRMDLGECPKIHDLALRADYEKASKN 72
N + + NV++ VCK +L CP E+ ++TR DL
Sbjct: 17 NLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDL--------------------- 55
Query: 73 RDYYYDIDRMDLGECPKIHDLALRADYEKASKNRDYYYDIDAMEHLQAFISDCDRRTELA 132
G C KIHD LR YEK+S+ Y+ D + +LQ+ +++ +RR
Sbjct: 56 ------------GPCEKIHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRG 103
Query: 133 KQRLLETQEVLSAEVA----EKANAVHQLAEDIGKKLAKAEELGAEGFVEESLKLMTEIE 188
RL +Q S+ A + + L + I L + EELG+EG VEE+ +M +E
Sbjct: 104 HARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVE 163
Query: 189 DLRKKKAEAEDTYRNSMPASSYQQQKLRVCEVCSAYLGIHDNDRRLADHFGGKLHLGFIK 248
L++++ T +++ + + Q++++ VCEVC A+L + D R+ DH GK H+G+ K
Sbjct: 164 QLKEERELLRSTT-STIESFAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAK 222
Query: 249 IREKLAELQAMEHLQAFISDCDR 271
I+ + EL+ E L+ + DR
Sbjct: 223 IKATVEELK--EKLRKRTEEPDR 243
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 259 MEHLQAFISDCDRRTELAKQRLLETQEVLSAEVA----EKANAVHQLAEDIGKKLAKAEE 314
+ +LQ+ +++ +RR RL +Q S+ A + + L + I L + EE
Sbjct: 86 LRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEE 145
Query: 315 LGAEGFVEESLKLM 328
LG+EG VEE+ +M
Sbjct: 146 LGSEGKVEEAQGMM 159
>sp|Q3SX41|LC7L3_BOVIN Luc7-like protein 3 OS=Bos taurus GN=LUC7L3 PE=2 SV=1
Length = 432
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 40/263 (15%)
Query: 13 NFPGESNKYNVKFFDSKVCKSFLLTCCPHEILSSTRMDLGECPKIHDLALRADYEKASKN 72
N + + NV++ VCK +L CP E+ ++TR DLG P
Sbjct: 17 NLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLG--P----------------- 57
Query: 73 RDYYYDIDRMDLGECPKIHDLALRADYEKASKNRDYYYDIDAMEHLQAFISDCDRRTELA 132
C KIHD LR YEK+S+ Y+ D + +LQ+ +++ +RR
Sbjct: 58 --------------CEKIHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRG 103
Query: 133 KQRLLETQEVLSAEVA----EKANAVHQLAEDIGKKLAKAEELGAEGFVEESLKLMTEIE 188
RL +Q S+ A + + L + I L + EELG+EG VEE+ +M +E
Sbjct: 104 HARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVE 163
Query: 189 DLRKKKAEAEDTYRNSMPASSYQQQKLRVCEVCSAYLGIHDNDRRLADHFGGKLHLGFIK 248
L++++ T +++ + + Q++++ VCEVC A+L + D R+ DH GK H+G+ K
Sbjct: 164 QLKEERELLRSTT-STIESFAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAK 222
Query: 249 IREKLAELQAMEHLQAFISDCDR 271
I+ + EL+ E L+ + DR
Sbjct: 223 IKATVEELK--EKLRKRTEEPDR 243
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 259 MEHLQAFISDCDRRTELAKQRLLETQEVLSAEVA----EKANAVHQLAEDIGKKLAKAEE 314
+ +LQ+ +++ +RR RL +Q S+ A + + L + I L + EE
Sbjct: 86 LRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEE 145
Query: 315 LGAEGFVEESLKLM 328
LG+EG VEE+ +M
Sbjct: 146 LGSEGKVEEAQGMM 159
>sp|Q5R8W6|LC7L3_PONAB Luc7-like protein 3 OS=Pongo abelii GN=LUC7L3 PE=2 SV=1
Length = 432
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 128/263 (48%), Gaps = 40/263 (15%)
Query: 13 NFPGESNKYNVKFFDSKVCKSFLLTCCPHEILSSTRMDLGECPKIHDLALRADYEKASKN 72
N + + NV++ VCK +L CP E+ ++TR DL
Sbjct: 17 NLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDL--------------------- 55
Query: 73 RDYYYDIDRMDLGECPKIHDLALRADYEKASKNRDYYYDIDAMEHLQAFISDCDRRTELA 132
G C KIHD LR YEK+S+ Y+ D + +LQ+ +++ +RR
Sbjct: 56 ------------GPCEKIHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRG 103
Query: 133 KQRLLETQEVLSAEVA----EKANAVHQLAEDIGKKLAKAEELGAEGFVEESLKLMTEIE 188
RL +Q S+ A + + L + I L + EELG+EG VEE+ +M +E
Sbjct: 104 HARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVE 163
Query: 189 DLRKKKAEAEDTYRNSMPASSYQQQKLRVCEVCSAYLGIHDNDRRLADHFGGKLHLGFIK 248
L++++ T +++ + + Q++++ VCEVC A+L + D R+ DH GK H+G+ K
Sbjct: 164 QLKEERELLRSTT-STIESFAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAK 222
Query: 249 IREKLAELQAMEHLQAFISDCDR 271
I+ + EL+ E L+ + DR
Sbjct: 223 IKATVEELK--EKLRKRTEEPDR 243
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 259 MEHLQAFISDCDRRTELAKQRLLETQEVLSAEVA----EKANAVHQLAEDIGKKLAKAEE 314
+ +LQ+ +++ +RR RL +Q S+ A + + L + I L + EE
Sbjct: 86 LRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEE 145
Query: 315 LGAEGFVEESLKLM 328
LG+EG VEE+ +M
Sbjct: 146 LGSEGKVEEAQGMM 159
>sp|O95232|LC7L3_HUMAN Luc7-like protein 3 OS=Homo sapiens GN=LUC7L3 PE=1 SV=2
Length = 432
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 128/263 (48%), Gaps = 40/263 (15%)
Query: 13 NFPGESNKYNVKFFDSKVCKSFLLTCCPHEILSSTRMDLGECPKIHDLALRADYEKASKN 72
N + + NV++ VCK +L CP E+ ++TR DL
Sbjct: 17 NLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDL--------------------- 55
Query: 73 RDYYYDIDRMDLGECPKIHDLALRADYEKASKNRDYYYDIDAMEHLQAFISDCDRRTELA 132
G C KIHD LR YEK+S+ Y+ D + +LQ+ +++ +RR
Sbjct: 56 ------------GPCEKIHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRG 103
Query: 133 KQRLLETQEVLSAEVA----EKANAVHQLAEDIGKKLAKAEELGAEGFVEESLKLMTEIE 188
RL +Q S+ A + + L + I L + EELG+EG VEE+ +M +E
Sbjct: 104 HARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVE 163
Query: 189 DLRKKKAEAEDTYRNSMPASSYQQQKLRVCEVCSAYLGIHDNDRRLADHFGGKLHLGFIK 248
L++++ T +++ + + Q++++ VCEVC A+L + D R+ DH GK H+G+ K
Sbjct: 164 QLKEERELLRSTT-STIESFAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAK 222
Query: 249 IREKLAELQAMEHLQAFISDCDR 271
I+ + EL+ E L+ + DR
Sbjct: 223 IKATVEELK--EKLRKRTEEPDR 243
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 259 MEHLQAFISDCDRRTELAKQRLLETQEVLSAEVA----EKANAVHQLAEDIGKKLAKAEE 314
+ +LQ+ +++ +RR RL +Q S+ A + + L + I L + EE
Sbjct: 86 LRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEE 145
Query: 315 LGAEGFVEESLKLM 328
LG+EG VEE+ +M
Sbjct: 146 LGSEGKVEEAQGMM 159
>sp|Q54XQ8|LUC7L_DICDI Luc7-like protein OS=Dictyostelium discoideum GN=crop PE=3 SV=1
Length = 360
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 114/264 (43%), Gaps = 59/264 (22%)
Query: 14 FPGESNKYNVKFFDSKVCKSFLLTCCPHEILSSTRMDLGECPKIHDLALRADYEKASKNR 73
P + K F D +CK FL CPHE+ ++ +
Sbjct: 19 LPKDRIKVENDFNDPDICKFFLCGLCPHELFTNANI------------------------ 54
Query: 74 DYYYDIDRMDLGECPKIHDLALRADYEKASKNRDYYYDIDAMEHLQAFISDCDRRTELAK 133
DLG C K+HD Y+ Y Y+ + + ++ ISD D++ + K
Sbjct: 55 --------RDLGPCSKLHDENCVKQYQNNKDKDKYDYEREWVRVIEGLISDNDKKIKRNK 106
Query: 134 QRLLET-------------QEVLSA---------EVAEKANAVHQLAEDIGKKLAKAEEL 171
+RLL+ Q+ +S E+ + + +L I + L KAEEL
Sbjct: 107 ERLLQNPNGDANHHGGPIQQQSISQLDDEEGGLLPDKEQNSKITELDLKIQELLKKAEEL 166
Query: 172 GAEGFVEESLKLMTEIEDLRKKKAEAEDTYRNSMPASSYQQQKLRVCEVCSAYLGIHDND 231
G EG + E+ LMTE ++L+ +K E E + + +++ VCE+C A L + D +
Sbjct: 167 GEEGQITEAQALMTEADELKNQKVELE-----KIEQEKNENKRMSVCEICGALLFVGDKE 221
Query: 232 RRLADHFGGKLHLGFIKIREKLAE 255
+R H GK H+GF KIRE + E
Sbjct: 222 KRSISHLEGKKHIGFQKIREVMEE 245
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 22/91 (24%)
Query: 262 LQAFISDCDRRTELAKQRLLET-------------QEVLSA---------EVAEKANAVH 299
++ ISD D++ + K+RLL+ Q+ +S E+ + +
Sbjct: 91 IEGLISDNDKKIKRNKERLLQNPNGDANHHGGPIQQQSISQLDDEEGGLLPDKEQNSKIT 150
Query: 300 QLAEDIGKKLAKAEELGAEGFVEESLKLMTE 330
+L I + L KAEELG EG + E+ LMTE
Sbjct: 151 ELDLKIQELLKKAEELGEEGQITEAQALMTE 181
>sp|Q07508|LUC7_YEAST Protein LUC7 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=LUC7 PE=1 SV=1
Length = 261
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 47/240 (19%)
Query: 20 KYNVKFFDSKVCKSFLLTCCPHEILSSTRMDLGECPKIHDLALRADYEKASKNRDYYYDI 79
K ++ D K+CKS+L+ CP+++ T+ LG+
Sbjct: 34 KRDLGLHDPKICKSYLVGECPYDLFQGTKQSLGK-------------------------- 67
Query: 80 DRMDLGECPKIHDLALRADYEKASKNRDYY--YDIDAMEHLQAFISDCDRRTELAKQRLL 137
CP++H + YE+ K + ++ + + L F+++C+ + +A Q L
Sbjct: 68 -------CPQMHLTKHKIQYEREVKQGKTFPEFEREYLAILSRFVNECNGQISVALQNLK 120
Query: 138 ETQE--VLSAEVAEKANAVHQLAEDIGKK---LAKAEELGAEGFVEESLKLMTEIEDLRK 192
T E + +V E+ + + +G++ L +A+E+ + G ++ S+KL ++L
Sbjct: 121 HTAEERMKIQQVTEELDVLDVRIGLMGQEIDSLIRADEV-SMGMLQ-SVKL----QELIS 174
Query: 193 KKAEAEDTYRN-SMPASSYQQQKLRVCEVCSAYLGIHDNDRRLADHFGGKLHLGFIKIRE 251
K+ E RN + QQKL+VCEVC AYL D DRRLADHF GK+HLG++K+RE
Sbjct: 175 KRKEVAKRVRNITENVGQSAQQKLQVCEVCGAYLSRLDTDRRLADHFLGKIHLGYVKMRE 234
>sp|Q8SSE4|SYEC_ENCCU Probable glutamate--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU02_1210 PE=3 SV=1
Length = 642
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 15/80 (18%)
Query: 54 CPKIHDL-----ALRADYEKASKNRDYYYDIDRMDLGECPKIHDLALRADYEKA--SKNR 106
CP + L +LRA+ E +N+ YY+ ID + L PKIHD + R ++E SK +
Sbjct: 330 CPIVDSLEGITLSLRAN-EYRDRNQQYYWFIDNLRLRNRPKIHDFS-RLNFENTVLSKRK 387
Query: 107 DYYYDIDAMEHLQAFISDCD 126
YY +D F+S D
Sbjct: 388 LKYY-VD-----NGFVSGWD 401
>sp|B9DMU3|DNLJ_STACT DNA ligase OS=Staphylococcus carnosus (strain TM300) GN=ligA PE=3
SV=1
Length = 668
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 29/190 (15%)
Query: 142 VLSAEVAEKANAVHQLAEDIGKK--LAKAEELGAEGF--VEESLKL----MTEIEDLRKK 193
+L+A A K N++ L +G + KA ++ AE F ++ K+ + EI D+ K
Sbjct: 488 LLNAIEASKKNSLEHLLFGLGIRHLGVKASQVIAERFETMDRLFKVTEEELLEIHDIGDK 547
Query: 194 KAEAEDTYRNSMPASSYQQQKLRVCEVCSAYLGIHDNDRRLADHFGGKLHLGFIKIREKL 253
A + TY N+ + + KLR V Y GI ++ + F GK + + KL
Sbjct: 548 LATSLITYLNNKDIIALIE-KLRRKNVNMTYEGIKTSEIQTDSEFNGKT----VVLTGKL 602
Query: 254 AELQAMEHLQAFISDCDRRTELAKQRLLETQEVLSAEVAEKANAVHQLAEDIGKKLAKAE 313
+ RTE +K LE Q + K + ED G KL KAE
Sbjct: 603 HNMT--------------RTEASK--WLEAQGAKTTSSVTKNTDLVIAGEDAGSKLTKAE 646
Query: 314 ELGAEGFVEE 323
+LG E + E+
Sbjct: 647 KLGTEVWSED 656
>sp|O31465|GLSA1_BACSU Glutaminase 1 OS=Bacillus subtilis (strain 168) GN=glsA1 PE=1 SV=1
Length = 327
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 67 EKASKNRDYYYDIDRMDLGECPKIHDLALRADYEKASKNRDYYYDIDAMEHLQA 120
E A + ++ Y + +G+ P+IH+ R+++E A +NR Y + L+A
Sbjct: 139 ESAYEKLEFLYSVMETLIGKRPRIHEEVFRSEWETAHRNRALAYYLKETNFLEA 192
>sp|Q21065|IFA3_CAEEL Intermediate filament protein ifa-3 OS=Caenorhabditis elegans
GN=ifa-3 PE=1 SV=1
Length = 581
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 78 DIDRMDLGECPKIHDLALRADYEKASKNRDYYYDIDAMEHLQAFISDCDR-----RTELA 132
+ID M G ++ DL +A + S+NR+Y+ + + M ++ ++ DR R +L
Sbjct: 243 EIDFMKRGFETELKDLQAQAARDTTSENREYFKN-ELMNSIRDIRAEYDRFMAGNRNDLE 301
Query: 133 KQRLLETQEV------LSAEVAEKANAVHQLAEDIGKKLAKAEELGA-EGFVEESLKLMT 185
+ QE+ +AE+ K + V +L + + +K EL A G +E+ L
Sbjct: 302 SWSQIRVQEINTQTNRQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLEKQL---- 357
Query: 186 EIEDLRKKKAEAEDTYRNSMPASSYQQQKLRVCEVCSAYL 225
EDL + + + +Y ++ Q +KLR E C A L
Sbjct: 358 --EDLNYQLEDDQRSYEAALNDKDAQVRKLR--EECQALL 393
>sp|A7THU9|SP110_VANPO Spindle pole body component 110 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=SPC110 PE=3 SV=1
Length = 929
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 235 ADHFGGKLHLGFIKIREKLAELQAMEHLQAFISDCDRRTELAKQRLLETQEVLSAEVAEK 294
+DH G + L K++EK +++ +E+ I + TEL K RL Q+ ++ EK
Sbjct: 303 SDHLGSEFLLLQNKLKEKNSQISVLEN--NLIDSKNTATEL-KTRLENLQKEYDDKLREK 359
Query: 295 ANAVHQLAEDI 305
N +H+L ++I
Sbjct: 360 INQIHKLDDNI 370
>sp|B0UUT7|SYS_HAES2 Serine--tRNA ligase OS=Haemophilus somnus (strain 2336) GN=serS
PE=3 SV=1
Length = 429
Score = 32.0 bits (71), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 119 QAFISDCDRRTELAKQR--LLETQEVLSAEVAEKA---NAVHQLAEDIGKKLAKAEELGA 173
+ FI D D+ ++L +QR L E L AE ++ A EDI LA+ + +GA
Sbjct: 22 RGFILDVDKFSQLEEQRKTLQIKTETLQAERNSRSKTIGAAKARGEDISTLLAEVDHMGA 81
Query: 174 E--GFVEESLKLMTEIEDL 190
E EE ++TEIE L
Sbjct: 82 ELNTVKEELANVLTEIEQL 100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,429,644
Number of Sequences: 539616
Number of extensions: 4696202
Number of successful extensions: 20262
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 352
Number of HSP's that attempted gapping in prelim test: 19766
Number of HSP's gapped (non-prelim): 823
length of query: 346
length of database: 191,569,459
effective HSP length: 118
effective length of query: 228
effective length of database: 127,894,771
effective search space: 29160007788
effective search space used: 29160007788
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)