Query psy4156
Match_columns 160
No_of_seqs 128 out of 1132
Neff 6.4
Searched_HMMs 46136
Date Fri Aug 16 18:19:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4156.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4156hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00108 Thiolase_N: Thiolase, 100.0 2.6E-33 5.7E-38 231.6 12.0 122 37-158 1-122 (264)
2 PRK06025 acetyl-CoA acetyltran 100.0 1E-30 2.3E-35 228.5 13.7 122 37-158 1-126 (417)
3 PRK13359 beta-ketoadipyl CoA t 100.0 7.8E-30 1.7E-34 222.0 13.8 122 37-158 1-124 (400)
4 PRK06504 acetyl-CoA acetyltran 100.0 2.1E-29 4.5E-34 218.7 13.4 121 37-157 1-122 (390)
5 PRK07850 acetyl-CoA acetyltran 100.0 2.5E-29 5.4E-34 217.8 13.6 121 37-157 1-122 (387)
6 PRK06633 acetyl-CoA acetyltran 100.0 1.7E-29 3.6E-34 219.5 11.8 120 38-157 3-122 (392)
7 PRK08131 acetyl-CoA acetyltran 100.0 7.8E-29 1.7E-33 215.7 13.7 121 37-157 1-122 (401)
8 PRK09050 beta-ketoadipyl CoA t 100.0 8.2E-29 1.8E-33 215.6 13.6 121 37-157 1-123 (401)
9 TIGR02446 FadI fatty oxidation 100.0 1.1E-28 2.3E-33 216.6 12.6 122 35-156 4-125 (430)
10 PRK08242 acetyl-CoA acetyltran 100.0 2E-28 4.4E-33 213.3 13.7 121 37-157 1-124 (402)
11 PRK08963 fadI 3-ketoacyl-CoA t 100.0 2.4E-28 5.3E-33 214.0 12.3 121 37-157 4-124 (428)
12 PRK09052 acetyl-CoA acetyltran 100.0 4.5E-28 9.7E-33 210.8 13.6 125 33-157 1-128 (399)
13 PRK07108 acetyl-CoA acetyltran 100.0 5.7E-28 1.2E-32 209.6 13.6 121 37-157 1-123 (392)
14 TIGR02430 pcaF beta-ketoadipyl 100.0 5.1E-28 1.1E-32 210.6 13.1 120 38-157 1-122 (400)
15 PRK08235 acetyl-CoA acetyltran 100.0 7.5E-28 1.6E-32 208.9 13.1 121 37-157 1-121 (393)
16 KOG1390|consensus 99.9 4.7E-28 1E-32 203.7 9.9 123 36-158 4-126 (396)
17 PRK06205 acetyl-CoA acetyltran 99.9 1.9E-27 4.1E-32 206.9 13.3 121 37-157 1-121 (404)
18 PRK05656 acetyl-CoA acetyltran 99.9 2.8E-27 6.2E-32 205.1 14.0 121 37-157 1-121 (393)
19 PRK09051 beta-ketothiolase; Pr 99.9 3.6E-27 7.7E-32 204.8 14.0 121 37-157 2-123 (394)
20 PRK06954 acetyl-CoA acetyltran 99.9 2.9E-27 6.3E-32 205.4 12.6 119 38-156 7-125 (397)
21 PRK06366 acetyl-CoA acetyltran 99.9 8.2E-27 1.8E-31 201.9 13.1 120 37-156 1-120 (388)
22 PRK09268 acetyl-CoA acetyltran 99.9 1.1E-26 2.4E-31 203.6 13.9 122 36-157 5-126 (427)
23 PRK07661 acetyl-CoA acetyltran 99.9 8.2E-27 1.8E-31 202.4 12.7 121 37-157 1-123 (391)
24 PRK08947 fadA 3-ketoacyl-CoA t 99.9 8.8E-27 1.9E-31 201.8 12.2 121 37-157 1-124 (387)
25 PTZ00455 3-ketoacyl-CoA thiola 99.9 3.2E-26 7E-31 201.3 14.0 129 29-157 3-153 (438)
26 TIGR02445 fadA fatty oxidation 99.9 1.6E-26 3.5E-31 200.1 11.0 119 39-157 1-122 (385)
27 PRK08170 acetyl-CoA acetyltran 99.9 2.5E-25 5.4E-30 194.8 13.1 120 37-156 2-121 (426)
28 PRK06445 acetyl-CoA acetyltran 99.9 2.3E-25 5.1E-30 193.1 12.1 120 37-156 1-127 (394)
29 PLN02287 3-ketoacyl-CoA thiola 99.9 7.8E-25 1.7E-29 193.3 14.2 121 37-157 45-167 (452)
30 PLN02644 acetyl-CoA C-acetyltr 99.9 7.4E-25 1.6E-29 190.1 13.5 118 39-156 2-119 (394)
31 PRK05790 putative acyltransfer 99.9 1.6E-24 3.5E-29 187.3 13.9 120 37-156 1-120 (393)
32 PRK07851 acetyl-CoA acetyltran 99.9 2.6E-24 5.6E-29 187.5 13.3 120 37-157 1-123 (406)
33 COG0183 PaaJ Acetyl-CoA acetyl 99.9 1.6E-24 3.5E-29 188.2 11.8 123 37-159 1-127 (392)
34 PRK06690 acetyl-CoA acetyltran 99.9 1.8E-24 3.9E-29 186.3 11.7 114 39-157 2-115 (361)
35 KOG1389|consensus 99.9 1.1E-24 2.4E-29 183.4 8.8 124 34-157 32-156 (435)
36 PRK07801 acetyl-CoA acetyltran 99.9 4.9E-24 1.1E-28 184.0 12.6 120 37-156 1-121 (382)
37 cd00751 thiolase Thiolase are 99.9 4.7E-23 1E-27 177.8 11.5 116 41-156 1-116 (386)
38 KOG1391|consensus 99.9 3.1E-23 6.7E-28 171.6 8.9 121 37-157 3-124 (396)
39 TIGR01930 AcCoA-C-Actrans acet 99.9 3.3E-22 7.2E-27 172.9 12.0 116 42-157 1-116 (386)
40 PRK06365 acetyl-CoA acetyltran 99.9 8E-22 1.7E-26 173.1 13.0 117 37-157 15-132 (430)
41 cd00826 nondecarbox_cond_enzym 99.9 5.7E-22 1.2E-26 172.1 11.9 114 43-157 1-118 (393)
42 PRK12578 acetyl-CoA acetyltran 99.9 2.7E-21 5.8E-26 166.9 13.0 114 38-156 1-114 (385)
43 PRK06157 acetyl-CoA acetyltran 99.9 3.2E-21 6.9E-26 167.6 13.2 114 38-156 7-120 (398)
44 PRK07516 acetyl-CoA acetyltran 99.9 3.8E-21 8.2E-26 166.3 12.7 116 37-157 1-118 (389)
45 PRK06059 lipid-transfer protei 99.8 1.1E-20 2.5E-25 163.7 12.5 113 38-156 4-117 (399)
46 PRK06064 acetyl-CoA acetyltran 99.8 1.3E-20 2.9E-25 162.6 12.8 116 37-157 1-118 (389)
47 PRK06289 acetyl-CoA acetyltran 99.8 3.8E-20 8.2E-25 160.8 12.4 118 38-157 3-123 (403)
48 KOG1392|consensus 99.8 2.6E-20 5.5E-25 156.3 5.1 133 24-156 27-160 (465)
49 PRK08256 lipid-transfer protei 99.8 9.8E-19 2.1E-23 151.3 12.7 112 39-157 2-113 (391)
50 cd00829 SCP-x_thiolase Thiolas 99.8 1.2E-18 2.5E-23 148.9 11.5 110 43-157 1-110 (375)
51 PRK08313 acetyl-CoA acetyltran 99.8 3.9E-18 8.4E-23 147.7 13.0 114 37-156 2-118 (386)
52 COG0332 FabH 3-oxoacyl-[acyl-c 99.8 2.4E-18 5.2E-23 146.5 11.0 118 37-157 29-146 (323)
53 PRK06065 acetyl-CoA acetyltran 99.8 8.4E-18 1.8E-22 146.2 12.9 113 38-156 9-123 (392)
54 PRK06158 thiolase; Provisional 99.7 2.2E-17 4.8E-22 142.9 11.6 110 38-156 8-118 (384)
55 CHL00203 fabH 3-oxoacyl-acyl-c 99.7 3.3E-17 7.2E-22 138.0 11.5 115 39-157 30-144 (326)
56 KOG1406|consensus 99.7 4.4E-17 9.5E-22 135.5 9.0 120 34-158 2-121 (408)
57 PRK09352 3-oxoacyl-(acyl carri 99.7 1.2E-16 2.5E-21 133.4 11.0 114 40-156 32-145 (319)
58 TIGR00747 fabH 3-oxoacyl-(acyl 99.7 3.9E-16 8.4E-21 130.4 10.5 113 40-155 31-143 (318)
59 PRK09258 3-oxoacyl-(acyl carri 99.7 4.3E-16 9.3E-21 131.3 10.6 110 47-156 46-155 (338)
60 PRK06066 acetyl-CoA acetyltran 99.7 1.2E-15 2.5E-20 132.7 13.2 113 36-156 2-117 (385)
61 PRK08142 acetyl-CoA acetyltran 99.6 1.3E-15 2.7E-20 132.5 11.5 110 38-156 5-114 (388)
62 PLN02326 3-oxoacyl-[acyl-carri 99.6 1.7E-15 3.7E-20 130.7 11.3 114 39-156 75-188 (379)
63 cd00827 init_cond_enzymes "ini 99.6 1.8E-15 4E-20 125.9 11.0 109 48-157 34-142 (324)
64 PRK12879 3-oxoacyl-(acyl carri 99.6 2.2E-15 4.7E-20 126.1 11.3 109 47-156 38-146 (325)
65 cd00830 KAS_III Ketoacyl-acyl 99.6 2.5E-15 5.4E-20 125.0 11.2 110 46-156 34-143 (320)
66 PRK06816 3-oxoacyl-(acyl carri 99.6 1.5E-15 3.3E-20 130.9 10.2 109 47-156 43-156 (378)
67 TIGR00748 HMG_CoA_syn_Arc hydr 99.6 2.8E-15 6.2E-20 127.9 11.0 116 40-157 30-145 (345)
68 PRK12880 3-oxoacyl-(acyl carri 99.6 4.3E-15 9.4E-20 127.4 10.5 109 47-156 45-153 (353)
69 PRK05963 3-oxoacyl-(acyl carri 99.6 5.6E-15 1.2E-19 124.1 10.3 109 46-156 36-144 (326)
70 PRK07855 lipid-transfer protei 99.6 1.1E-14 2.5E-19 126.3 12.4 105 38-151 4-108 (386)
71 PRK07204 3-oxoacyl-(acyl carri 99.6 1.4E-14 3.1E-19 121.7 11.1 110 46-156 37-147 (329)
72 PRK07937 lipid-transfer protei 99.6 2.8E-14 6.2E-19 122.7 12.3 113 37-156 1-115 (352)
73 PRK04262 hypothetical protein; 99.6 1.5E-14 3.3E-19 123.1 10.5 108 47-154 36-143 (347)
74 PRK08257 acetyl-CoA acetyltran 99.5 7.3E-14 1.6E-18 125.0 13.2 117 37-156 3-121 (498)
75 cd00327 cond_enzymes Condensin 99.5 6.8E-14 1.5E-18 112.3 10.2 93 60-153 5-97 (254)
76 PRK06840 hypothetical protein; 99.5 6.1E-14 1.3E-18 118.5 10.2 110 46-156 37-148 (339)
77 PRK07515 3-oxoacyl-(acyl carri 99.5 1.5E-13 3.2E-18 118.0 9.9 94 61-156 94-187 (372)
78 cd00831 CHS_like Chalcone and 99.5 2.1E-13 4.7E-18 116.3 8.7 95 61-156 84-179 (361)
79 cd00825 decarbox_cond_enzymes 99.5 3.4E-13 7.3E-18 112.3 9.3 102 40-156 2-128 (332)
80 TIGR02845 spore_V_AD stage V s 99.4 8.1E-13 1.7E-17 112.5 10.6 90 59-155 47-136 (327)
81 PRK08304 stage V sporulation p 99.4 7.7E-13 1.7E-17 112.9 10.2 93 58-157 52-144 (337)
82 PLN03168 chalcone synthase; Pr 99.4 2.4E-12 5.1E-17 112.1 10.1 96 61-157 100-196 (389)
83 PLN02577 hydroxymethylglutaryl 99.4 2.4E-12 5.2E-17 114.3 10.1 108 47-155 36-150 (459)
84 PLN03169 chalcone synthase fam 99.4 2.2E-12 4.8E-17 112.2 8.8 97 59-156 103-200 (391)
85 PLN03171 chalcone synthase-lik 99.4 3.6E-12 7.7E-17 111.2 10.1 96 60-156 106-202 (399)
86 PLN02932 3-ketoacyl-CoA syntha 99.4 5.2E-12 1.1E-16 112.7 10.7 95 62-157 148-243 (478)
87 TIGR01835 HMG-CoA-S_prok 3-hyd 99.3 8.5E-12 1.8E-16 108.0 11.6 110 41-155 31-140 (379)
88 PLN02377 3-ketoacyl-CoA syntha 99.3 1.8E-11 3.8E-16 109.8 10.6 96 61-157 171-267 (502)
89 TIGR01833 HMG-CoA-S_euk 3-hydr 99.3 2.3E-11 4.9E-16 108.0 10.2 106 47-153 33-145 (454)
90 PLN03170 chalcone synthase; Pr 99.3 1.5E-11 3.2E-16 107.5 8.3 95 61-156 105-200 (401)
91 TIGR03150 fabF beta-ketoacyl-a 99.3 4.9E-11 1.1E-15 102.6 11.3 91 63-155 72-192 (407)
92 PRK12404 stage V sporulation p 99.3 2.1E-11 4.6E-16 103.8 8.6 88 60-154 52-139 (334)
93 PLN02192 3-ketoacyl-CoA syntha 99.3 3.9E-11 8.4E-16 107.7 10.6 95 62-157 176-271 (511)
94 PLN03173 chalcone synthase; Pr 99.2 2.9E-11 6.4E-16 105.4 9.4 95 61-156 101-196 (391)
95 PLN03172 chalcone synthase fam 99.2 3.8E-11 8.3E-16 104.7 10.0 94 62-156 102-196 (393)
96 PRK07314 3-oxoacyl-(acyl carri 99.2 7.6E-11 1.6E-15 102.1 10.7 92 62-155 72-193 (411)
97 PLN02854 3-ketoacyl-CoA syntha 99.2 1.9E-10 4.2E-15 103.5 10.4 95 62-157 188-283 (521)
98 PRK06147 3-oxoacyl-(acyl carri 99.1 2.7E-10 5.9E-15 97.6 9.6 115 39-156 45-165 (348)
99 smart00825 PKS_KS Beta-ketoacy 99.1 1.5E-10 3.2E-15 100.3 6.9 91 63-155 88-201 (424)
100 cd00834 KAS_I_II Beta-ketoacyl 99.0 1.3E-09 2.8E-14 93.5 8.9 93 61-155 70-192 (406)
101 cd00833 PKS polyketide synthas 99.0 7.8E-10 1.7E-14 95.2 6.9 92 62-155 87-201 (421)
102 PLN00415 3-ketoacyl-CoA syntha 99.0 2.7E-09 5.9E-14 94.9 10.2 96 61-157 132-229 (466)
103 cd00828 elong_cond_enzymes "el 99.0 2.9E-09 6.2E-14 91.9 8.8 94 61-155 71-193 (407)
104 PTZ00050 3-oxoacyl-acyl carrie 98.9 5.4E-09 1.2E-13 91.5 9.6 94 59-154 74-198 (421)
105 PRK06333 3-oxoacyl-(acyl carri 98.9 1.1E-08 2.4E-13 89.1 9.3 90 63-154 83-203 (424)
106 PRK08722 3-oxoacyl-(acyl carri 98.9 4.3E-08 9.2E-13 85.9 12.5 89 64-154 76-194 (414)
107 PRK08439 3-oxoacyl-(acyl carri 98.8 3.6E-08 7.9E-13 85.9 9.0 91 62-154 72-192 (406)
108 COG3425 PksG 3-hydroxy-3-methy 98.8 2.3E-08 4.9E-13 86.8 7.3 93 58-150 47-140 (377)
109 PRK07103 polyketide beta-ketoa 98.7 5E-08 1.1E-12 85.1 9.1 88 62-152 80-195 (410)
110 PF00109 ketoacyl-synt: Beta-k 98.7 5.2E-08 1.1E-12 78.5 8.5 91 63-155 88-208 (254)
111 PLN02836 3-oxoacyl-[acyl-carri 98.7 9.2E-08 2E-12 84.2 9.6 91 62-154 93-214 (437)
112 PF00195 Chal_sti_synt_N: Chal 98.7 2.2E-07 4.7E-12 75.9 10.1 96 60-156 98-194 (226)
113 PF08392 FAE1_CUT1_RppA: FAE1/ 98.6 2.3E-07 5.1E-12 78.2 10.2 95 62-157 83-178 (290)
114 PRK05952 3-oxoacyl-(acyl carri 98.6 3E-07 6.6E-12 79.9 10.4 87 64-153 58-175 (381)
115 PRK06519 3-oxoacyl-(acyl carri 98.5 6.9E-07 1.5E-11 78.2 9.5 90 62-153 73-204 (398)
116 PF01154 HMG_CoA_synt_N: Hydro 98.5 5.5E-07 1.2E-11 70.9 7.7 85 58-142 49-135 (174)
117 PRK06501 3-oxoacyl-(acyl carri 98.5 9.1E-07 2E-11 77.7 9.9 50 101-152 154-203 (425)
118 PLN02787 3-oxoacyl-[acyl-carri 98.5 8.4E-07 1.8E-11 80.6 9.5 88 64-153 201-320 (540)
119 PRK07967 3-oxoacyl-(acyl carri 98.4 1.1E-06 2.3E-11 77.1 9.4 91 62-154 71-192 (406)
120 PRK09116 3-oxoacyl-(acyl carri 98.4 8.6E-07 1.9E-11 77.5 8.6 91 63-155 74-195 (405)
121 cd00832 CLF Chain-length facto 98.4 1.2E-06 2.7E-11 76.3 9.5 90 62-154 71-190 (399)
122 COG3424 BcsA Predicted naringe 98.3 1.8E-06 3.9E-11 73.4 7.8 107 48-156 63-170 (356)
123 PRK14691 3-oxoacyl-(acyl carri 98.3 3.1E-06 6.8E-11 72.7 9.0 90 62-154 4-121 (342)
124 PRK07910 3-oxoacyl-(acyl carri 98.2 6.4E-06 1.4E-10 72.4 8.7 88 64-154 85-201 (418)
125 COG3321 Polyketide synthase mo 98.1 1E-05 2.2E-10 78.6 9.1 88 65-154 94-204 (1061)
126 PF07451 SpoVAD: Stage V sporu 98.0 4E-05 8.8E-10 65.2 8.6 84 63-153 52-135 (329)
127 TIGR02813 omega_3_PfaA polyket 98.0 3.3E-05 7.1E-10 80.5 9.2 50 102-153 186-235 (2582)
128 COG0304 FabB 3-oxoacyl-(acyl-c 97.9 6.6E-05 1.4E-09 66.3 8.4 91 61-153 70-191 (412)
129 PF08545 ACP_syn_III: 3-Oxoacy 97.8 5.7E-05 1.2E-09 51.6 5.0 39 118-156 1-39 (80)
130 PRK09185 3-oxoacyl-(acyl carri 97.7 0.00012 2.7E-09 63.5 7.7 53 101-155 139-191 (392)
131 KOG1394|consensus 97.6 0.00016 3.4E-09 63.0 6.1 90 63-154 95-217 (440)
132 KOG1393|consensus 95.3 0.095 2.1E-06 46.3 8.0 98 40-141 41-141 (462)
133 KOG1202|consensus 95.2 0.017 3.6E-07 57.3 3.4 90 63-152 88-198 (2376)
134 PRK08257 acetyl-CoA acetyltran 92.6 0.84 1.8E-05 41.3 8.8 106 38-149 266-381 (498)
135 PF08541 ACP_syn_III_C: 3-Oxoa 91.8 0.091 2E-06 36.0 1.3 58 74-136 1-62 (90)
136 PF02801 Ketoacyl-synt_C: Beta 90.4 0.67 1.5E-05 33.5 4.9 82 59-142 21-111 (119)
137 PRK06816 3-oxoacyl-(acyl carri 89.2 1.1 2.3E-05 38.8 6.1 64 66-134 274-346 (378)
138 PRK06064 acetyl-CoA acetyltran 87.6 0.85 1.8E-05 39.5 4.4 51 38-88 232-282 (389)
139 COG1214 Inactive homolog of me 87.3 0.96 2.1E-05 36.7 4.3 60 62-121 37-96 (220)
140 TIGR00748 HMG_CoA_syn_Arc hydr 87.3 1.2 2.7E-05 38.0 5.2 81 63-149 207-293 (345)
141 TIGR03285 methan_mark_14 putat 87.3 1 2.2E-05 39.8 4.6 67 57-123 60-136 (445)
142 PF13723 Ketoacyl-synt_2: Beta 86.8 7.1 0.00015 31.8 9.1 88 62-155 34-145 (218)
143 PRK12578 acetyl-CoA acetyltran 86.7 1 2.2E-05 39.0 4.4 97 38-140 231-352 (385)
144 PRK09604 UGMP family protein; 86.4 1.7 3.7E-05 37.2 5.5 84 63-156 52-142 (332)
145 cd00327 cond_enzymes Condensin 86.3 4.1 8.9E-05 32.2 7.4 77 63-141 144-226 (254)
146 TIGR03150 fabF beta-ketoacyl-a 85.7 5 0.00011 34.4 8.1 75 66-141 277-358 (407)
147 PRK06158 thiolase; Provisional 85.5 1.5 3.3E-05 38.1 4.9 94 38-140 229-348 (384)
148 PRK09185 3-oxoacyl-(acyl carri 85.4 7.2 0.00016 33.8 9.0 74 66-142 262-341 (392)
149 TIGR00747 fabH 3-oxoacyl-(acyl 85.3 1.2 2.7E-05 36.9 4.1 44 66-114 221-264 (318)
150 cd00829 SCP-x_thiolase Thiolas 83.5 2 4.3E-05 36.7 4.6 52 38-89 225-276 (375)
151 PF09887 DUF2114: Uncharacteri 83.4 2.1 4.5E-05 37.9 4.7 68 56-123 61-139 (448)
152 PRK07937 lipid-transfer protei 83.3 13 0.00027 32.2 9.5 104 37-150 224-334 (352)
153 PRK07204 3-oxoacyl-(acyl carri 83.0 5.8 0.00013 33.2 7.2 44 66-114 232-275 (329)
154 PRK05963 3-oxoacyl-(acyl carri 81.6 4.1 8.9E-05 34.0 5.8 65 64-133 227-291 (326)
155 smart00825 PKS_KS Beta-ketoacy 81.4 13 0.00027 32.2 8.9 79 63-142 278-366 (424)
156 CHL00203 fabH 3-oxoacyl-acyl-c 81.3 4.4 9.5E-05 34.0 5.9 71 66-141 228-299 (326)
157 PRK12879 3-oxoacyl-(acyl carri 81.3 2 4.3E-05 35.7 3.8 43 67-114 228-270 (325)
158 TIGR03725 bact_YeaZ universal 80.9 1.6 3.5E-05 34.5 2.9 32 61-92 32-63 (202)
159 PRK12880 3-oxoacyl-(acyl carri 80.7 6.1 0.00013 33.9 6.7 79 66-149 244-324 (353)
160 cd00825 decarbox_cond_enzymes 79.7 10 0.00022 31.3 7.5 77 63-141 204-286 (332)
161 cd00834 KAS_I_II Beta-ketoacyl 79.5 5.3 0.00011 34.1 5.9 78 64-142 275-359 (406)
162 PRK04262 hypothetical protein; 79.3 3.6 7.8E-05 35.0 4.7 74 64-142 209-288 (347)
163 PRK09258 3-oxoacyl-(acyl carri 79.2 13 0.00027 31.2 8.0 54 64-122 239-292 (338)
164 PLN02326 3-oxoacyl-[acyl-carri 79.2 9.2 0.0002 33.0 7.3 71 66-141 282-353 (379)
165 PRK06840 hypothetical protein; 79.0 6 0.00013 33.2 6.0 43 66-113 239-281 (339)
166 PRK06157 acetyl-CoA acetyltran 78.9 3.1 6.8E-05 36.3 4.3 49 38-87 238-291 (398)
167 TIGR00329 gcp_kae1 metallohydr 78.4 5.8 0.00013 33.4 5.7 29 63-91 49-77 (305)
168 PRK07516 acetyl-CoA acetyltran 78.2 3.7 7.9E-05 35.6 4.5 50 38-88 235-284 (389)
169 PRK06147 3-oxoacyl-(acyl carri 78.1 4.7 0.0001 34.6 5.1 91 65-156 235-335 (348)
170 PRK07314 3-oxoacyl-(acyl carri 78.1 4.2 9.2E-05 35.1 4.9 76 66-142 278-360 (411)
171 PRK07855 lipid-transfer protei 77.3 4.1 8.9E-05 35.5 4.6 52 38-89 236-291 (386)
172 PRK06519 3-oxoacyl-(acyl carri 77.3 6.7 0.00014 34.5 5.9 76 65-142 281-358 (398)
173 PRK08142 acetyl-CoA acetyltran 77.1 4.8 0.0001 35.2 5.0 95 38-139 231-350 (388)
174 cd00832 CLF Chain-length facto 76.8 7.9 0.00017 33.8 6.2 77 64-142 270-352 (399)
175 cd00828 elong_cond_enzymes "el 76.3 13 0.00028 32.0 7.4 78 64-142 274-358 (407)
176 TIGR01796 CM_mono_aroH monofun 75.3 7 0.00015 29.0 4.6 52 69-122 25-76 (117)
177 PTZ00455 3-ketoacyl-CoA thiola 75.1 4.6 9.9E-05 36.0 4.3 94 39-139 285-403 (438)
178 PRK07515 3-oxoacyl-(acyl carri 75.1 21 0.00045 30.6 8.3 25 65-89 272-296 (372)
179 COG0332 FabH 3-oxoacyl-[acyl-c 74.2 2.5 5.4E-05 36.4 2.4 75 62-141 221-296 (323)
180 PRK07103 polyketide beta-ketoa 74.2 17 0.00036 31.8 7.6 72 67-142 284-362 (410)
181 PF00814 Peptidase_M22: Glycop 73.5 2.2 4.7E-05 35.4 1.8 65 63-136 30-98 (268)
182 TIGR01930 AcCoA-C-Actrans acet 72.6 11 0.00023 32.8 5.9 75 67-148 289-371 (386)
183 PRK14691 3-oxoacyl-(acyl carri 72.5 22 0.00048 30.6 7.8 78 64-142 206-289 (342)
184 PRK05952 3-oxoacyl-(acyl carri 72.4 22 0.00047 31.1 7.8 76 64-142 254-335 (381)
185 cd00833 PKS polyketide synthas 72.2 22 0.00047 30.5 7.7 79 63-142 278-366 (421)
186 cd00830 KAS_III Ketoacyl-acyl 72.1 8.4 0.00018 31.7 5.0 53 64-121 223-275 (320)
187 PRK14878 UGMP family protein; 71.9 11 0.00023 32.2 5.7 66 65-141 47-117 (323)
188 PTZ00050 3-oxoacyl-acyl carrie 71.6 7.3 0.00016 34.2 4.8 77 65-142 284-369 (421)
189 PRK06066 acetyl-CoA acetyltran 71.1 6.8 0.00015 34.4 4.4 52 37-89 230-283 (385)
190 PRK09352 3-oxoacyl-(acyl carri 71.0 4.9 0.00011 33.3 3.4 44 66-114 221-264 (319)
191 cd02185 AroH Chorismate mutase 70.7 11 0.00024 28.0 4.7 52 69-122 25-76 (117)
192 PRK08722 3-oxoacyl-(acyl carri 70.6 12 0.00027 32.8 6.0 76 66-142 280-363 (414)
193 PRK06289 acetyl-CoA acetyltran 70.0 7.8 0.00017 33.8 4.6 70 66-140 278-371 (403)
194 PRK09050 beta-ketoadipyl CoA t 69.6 16 0.00035 32.1 6.5 69 67-141 300-377 (401)
195 PRK06333 3-oxoacyl-(acyl carri 69.2 12 0.00027 32.5 5.7 76 65-141 289-370 (424)
196 PRK13359 beta-ketoadipyl CoA t 68.4 16 0.00035 32.1 6.2 67 67-140 299-375 (400)
197 PF14574 DUF4445: Domain of un 67.9 9.2 0.0002 34.1 4.6 72 58-136 298-373 (412)
198 PRK06690 acetyl-CoA acetyltran 67.5 20 0.00042 31.2 6.5 25 65-89 259-283 (361)
199 TIGR03723 bact_gcp putative gl 67.5 5.7 0.00012 33.7 3.1 85 62-156 49-141 (314)
200 PRK06065 acetyl-CoA acetyltran 66.6 13 0.00028 32.6 5.2 52 37-89 236-289 (392)
201 PF02803 Thiolase_C: Thiolase, 66.2 4.6 0.0001 29.9 2.1 23 67-89 25-47 (123)
202 COG4401 AroH Chorismate mutase 65.9 9 0.00019 28.4 3.4 56 71-128 29-84 (125)
203 PLN02787 3-oxoacyl-[acyl-carri 64.7 19 0.00041 33.1 6.1 76 66-142 407-488 (540)
204 PF07736 CM_1: Chorismate muta 64.7 19 0.00042 26.7 5.1 59 61-121 14-75 (118)
205 PRK06501 3-oxoacyl-(acyl carri 64.5 13 0.00028 32.7 4.8 76 66-142 291-373 (425)
206 TIGR02430 pcaF beta-ketoadipyl 62.5 22 0.00047 31.3 5.9 66 67-140 299-375 (400)
207 TIGR03722 arch_KAE1 universal 62.5 6.7 0.00014 33.3 2.6 27 65-91 48-74 (322)
208 PRK09116 3-oxoacyl-(acyl carri 62.4 31 0.00067 30.2 6.8 75 65-142 276-356 (405)
209 cd00751 thiolase Thiolase are 61.7 12 0.00025 32.4 4.0 69 67-140 288-362 (386)
210 PRK06366 acetyl-CoA acetyltran 61.5 7.5 0.00016 33.8 2.8 24 66-89 287-310 (388)
211 PF09663 Amido_AtzD_TrzD: Amid 61.3 13 0.00029 32.5 4.2 78 9-89 77-158 (365)
212 PRK08256 lipid-transfer protei 61.2 14 0.0003 32.1 4.4 70 65-140 265-359 (391)
213 TIGR02990 ectoine_eutA ectoine 59.6 97 0.0021 25.4 9.0 88 43-149 36-127 (239)
214 PLN02836 3-oxoacyl-[acyl-carri 58.5 18 0.00038 32.0 4.7 23 66-88 301-323 (437)
215 PRK08235 acetyl-CoA acetyltran 58.5 13 0.00027 32.6 3.7 66 66-140 293-368 (393)
216 COG4065 Uncharacterized protei 58.1 16 0.00036 32.0 4.2 66 58-123 93-169 (480)
217 TIGR02714 amido_AtzD_TrzD ring 57.9 22 0.00048 31.1 5.0 79 9-89 77-159 (366)
218 PRK08313 acetyl-CoA acetyltran 55.7 22 0.00048 30.9 4.7 48 39-87 231-280 (386)
219 PRK09051 beta-ketothiolase; Pr 54.9 50 0.0011 28.9 6.9 67 67-140 295-369 (394)
220 PRK06025 acetyl-CoA acetyltran 54.8 34 0.00074 30.5 5.8 23 67-89 318-340 (417)
221 PTZ00340 O-sialoglycoprotein e 54.6 13 0.00027 32.5 3.0 54 63-122 50-109 (345)
222 COG3925 N-terminal domain of t 54.6 10 0.00022 27.2 2.0 32 3-47 38-69 (103)
223 PRK07910 3-oxoacyl-(acyl carri 53.8 31 0.00067 30.4 5.4 75 66-142 288-368 (418)
224 PRK06365 acetyl-CoA acetyltran 53.4 24 0.00052 31.3 4.7 25 65-89 294-320 (430)
225 COG0304 FabB 3-oxoacyl-(acyl-c 53.3 28 0.00061 31.0 5.1 29 66-94 278-307 (412)
226 PLN03169 chalcone synthase fam 53.1 45 0.00098 29.1 6.3 68 67-137 284-354 (391)
227 PRK09605 bifunctional UGMP fam 51.2 12 0.00026 33.7 2.5 27 65-91 51-77 (535)
228 PRK09052 acetyl-CoA acetyltran 50.8 11 0.00024 33.1 2.1 23 66-88 299-321 (399)
229 COG0533 QRI7 Metal-dependent p 50.3 20 0.00044 31.2 3.6 53 64-122 52-110 (342)
230 PRK05656 acetyl-CoA acetyltran 49.5 12 0.00026 32.7 2.1 23 67-89 294-316 (393)
231 PRK06633 acetyl-CoA acetyltran 49.2 11 0.00025 33.0 1.9 23 66-88 292-314 (392)
232 PRK06205 acetyl-CoA acetyltran 48.9 12 0.00026 32.8 2.0 67 66-140 300-378 (404)
233 KOG1394|consensus 47.8 15 0.00032 32.7 2.3 22 66-87 303-324 (440)
234 PRK05790 putative acyltransfer 47.7 14 0.0003 32.1 2.2 69 66-141 293-369 (393)
235 PRK07661 acetyl-CoA acetyltran 46.3 14 0.00031 32.2 2.1 25 65-89 290-314 (391)
236 PRK07108 acetyl-CoA acetyltran 45.9 12 0.00026 32.7 1.6 23 66-88 292-314 (392)
237 cd00826 nondecarbox_cond_enzym 45.4 14 0.0003 32.3 1.9 22 66-87 271-292 (393)
238 PRK07851 acetyl-CoA acetyltran 44.1 16 0.00034 32.1 2.0 22 66-87 305-326 (406)
239 PRK07850 acetyl-CoA acetyltran 43.9 1E+02 0.0023 26.8 7.1 68 66-140 287-362 (387)
240 PRK06445 acetyl-CoA acetyltran 43.7 16 0.00035 31.8 2.0 68 66-140 294-369 (394)
241 PRK06954 acetyl-CoA acetyltran 43.3 16 0.00035 31.9 2.0 22 66-87 297-318 (397)
242 PRK08170 acetyl-CoA acetyltran 42.9 18 0.00039 31.9 2.2 24 66-89 309-332 (426)
243 PRK08131 acetyl-CoA acetyltran 42.2 18 0.00038 31.8 2.0 23 66-88 298-320 (401)
244 PLN02287 3-ketoacyl-CoA thiola 41.7 18 0.00039 32.4 2.0 66 66-140 333-408 (452)
245 KOG1541|consensus 41.5 20 0.00043 30.0 2.0 30 102-131 37-66 (270)
246 PRK06059 lipid-transfer protei 41.1 22 0.00048 30.9 2.4 23 66-88 275-297 (399)
247 TIGR02445 fadA fatty oxidation 40.8 19 0.00042 31.3 2.1 24 66-89 282-305 (385)
248 PRK08242 acetyl-CoA acetyltran 40.4 19 0.00042 31.7 2.0 23 67-89 303-325 (402)
249 PF05378 Hydant_A_N: Hydantoin 39.7 44 0.00095 26.0 3.7 33 61-93 34-66 (176)
250 PRK07801 acetyl-CoA acetyltran 38.9 21 0.00046 30.8 2.0 67 67-140 283-357 (382)
251 PRK10287 thiosulfate:cyanide s 38.1 24 0.00052 25.0 1.9 30 124-153 67-96 (104)
252 TIGR02813 omega_3_PfaA polyket 37.9 1.3E+02 0.0027 33.2 7.7 75 67-142 318-402 (2582)
253 cd00831 CHS_like Chalcone and 37.7 1E+02 0.0022 26.2 5.9 45 65-114 260-306 (361)
254 COG3425 PksG 3-hydroxy-3-methy 37.2 1.4E+02 0.0031 26.4 6.8 86 49-139 194-286 (377)
255 PRK12342 hypothetical protein; 36.8 88 0.0019 26.0 5.3 48 68-120 99-146 (254)
256 cd01781 AF6_RA_repeat2 Ubiquit 36.7 43 0.00093 24.1 2.9 35 61-95 23-57 (100)
257 KOG2708|consensus 36.7 50 0.0011 27.9 3.7 27 64-90 51-77 (336)
258 PRK08947 fadA 3-ketoacyl-CoA t 36.7 24 0.00052 30.8 2.0 22 67-88 285-306 (387)
259 PRK06504 acetyl-CoA acetyltran 35.4 26 0.00057 30.6 2.0 51 65-122 289-339 (390)
260 PRK09268 acetyl-CoA acetyltran 34.8 29 0.00063 30.8 2.2 25 65-89 310-334 (427)
261 TIGR02981 phageshock_pspE phag 34.4 30 0.00066 24.3 1.9 30 124-153 65-94 (101)
262 PRK07027 cobalamin biosynthesi 34.2 54 0.0012 24.1 3.3 29 59-88 13-41 (126)
263 PF06089 Asparaginase_II: L-as 33.9 1.5E+02 0.0031 25.8 6.3 62 66-137 81-142 (324)
264 PLN02644 acetyl-CoA C-acetyltr 33.5 28 0.00062 30.3 1.9 68 67-140 294-368 (394)
265 TIGR02446 FadI fatty oxidation 33.2 30 0.00065 30.7 2.0 23 67-89 314-336 (430)
266 TIGR00365 monothiol glutaredox 31.9 1.3E+02 0.0028 20.8 4.8 55 69-133 32-86 (97)
267 PRK08439 3-oxoacyl-(acyl carri 31.8 2.6E+02 0.0056 24.3 7.7 76 64-142 274-356 (406)
268 COG3894 Uncharacterized metal- 31.7 33 0.00072 31.8 2.1 74 59-140 465-542 (614)
269 PRK08963 fadI 3-ketoacyl-CoA t 31.4 34 0.00074 30.2 2.1 24 66-89 311-334 (428)
270 PRK09585 anmK anhydro-N-acetyl 31.2 49 0.0011 29.1 3.0 65 62-127 69-140 (365)
271 KOG1406|consensus 29.8 53 0.0011 28.3 2.8 28 62-89 270-297 (408)
272 PLN03170 chalcone synthase; Pr 29.7 2.1E+02 0.0046 25.1 6.8 69 65-138 282-353 (401)
273 COG3473 Maleate cis-trans isom 29.7 1.4E+02 0.003 24.7 5.1 38 56-96 40-80 (238)
274 PF01323 DSBA: DSBA-like thior 28.9 5.8 0.00013 30.0 -2.8 64 70-136 126-190 (193)
275 PRK03359 putative electron tra 27.6 1.6E+02 0.0034 24.5 5.3 37 84-120 113-149 (256)
276 PLN03173 chalcone synthase; Pr 27.4 2.5E+02 0.0053 24.6 6.7 70 65-139 278-350 (391)
277 PF04422 FrhB_FdhB_N: Coenzyme 26.2 1.3E+02 0.0028 20.3 3.8 31 120-150 13-43 (82)
278 KOG2707|consensus 25.8 92 0.002 27.7 3.7 52 66-122 86-142 (405)
279 PLN02404 6,7-dimethyl-8-ribity 25.7 1.4E+02 0.0031 22.6 4.4 28 60-87 19-46 (141)
280 COG2086 FixA Electron transfer 25.4 2E+02 0.0044 24.0 5.6 50 67-121 100-149 (260)
281 COG2971 Predicted N-acetylgluc 25.3 63 0.0014 27.7 2.6 33 62-94 47-79 (301)
282 PRK10824 glutaredoxin-4; Provi 25.1 2E+02 0.0044 20.9 4.9 57 68-134 34-90 (115)
283 PF05589 DUF768: Protein of un 25.1 47 0.001 22.0 1.4 27 61-88 27-53 (64)
284 cd03022 DsbA_HCCA_Iso DsbA fam 24.8 31 0.00068 25.9 0.6 32 104-136 158-189 (192)
285 PRK13410 molecular chaperone D 24.7 2.1E+02 0.0045 27.1 6.1 53 66-123 311-363 (668)
286 PLN03172 chalcone synthase fam 24.4 2.8E+02 0.006 24.3 6.5 67 67-138 280-349 (393)
287 PF01890 CbiG_C: Cobalamin syn 24.3 84 0.0018 22.9 2.8 29 59-88 11-39 (121)
288 cd00827 init_cond_enzymes "ini 24.3 2.5E+02 0.0054 22.9 6.0 44 63-112 222-266 (324)
289 cd01522 RHOD_1 Member of the R 24.3 56 0.0012 23.1 1.8 38 113-153 63-101 (117)
290 PLN02854 3-ketoacyl-CoA syntha 22.5 4.4E+02 0.0096 24.3 7.6 70 66-140 387-465 (521)
291 PRK05788 cobalamin biosynthesi 20.7 1.2E+02 0.0025 26.0 3.4 30 58-88 203-232 (315)
292 PF03702 UPF0075: Uncharacteri 20.4 90 0.002 27.4 2.6 59 63-122 67-134 (364)
293 PLN03184 chloroplast Hsp70; Pr 20.1 2.6E+02 0.0055 26.4 5.7 52 67-123 349-400 (673)
No 1
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=100.00 E-value=2.6e-33 Score=231.56 Aligned_cols=122 Identities=40% Similarity=0.602 Sum_probs=110.6
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP 116 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP 116 (160)
|++|||+++.|||||++.|.|++.++.||+.++++++|++++|+|++||.+++||+.+...+++++|.+++.+|||.++|
T Consensus 1 M~~v~Iv~a~RTPfg~~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp 80 (264)
T PF00108_consen 1 MRDVVIVGAVRTPFGKFGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVP 80 (264)
T ss_dssp -TTEEEEEEEEE--ECTTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSE
T ss_pred CCCEEEEEeeeCccccCCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccc
Confidence 78999999999999999999999999999999999999999999999999999999987778899999999999998999
Q ss_pred eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCC
Q psy4156 117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA 158 (160)
Q Consensus 117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~ 158 (160)
+++||++|+||++|+++|+..|++|.+|++|++|+||||...
T Consensus 81 ~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p 122 (264)
T PF00108_consen 81 ATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVP 122 (264)
T ss_dssp EEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSC
T ss_pred eeeehhhhhHHHHHHHHhhhhhcCCCccEEEEeccccccccc
Confidence 999999999999999999999999999999999999999864
No 2
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.97 E-value=1e-30 Score=228.45 Aligned_cols=122 Identities=23% Similarity=0.375 Sum_probs=116.6
Q ss_pred CCceEEEeeeecccc--c-cCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCC
Q psy4156 37 DNDVVIVSAARTPIG--S-FLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIP 112 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg--~-~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp 112 (160)
|+++||+++.||||| + ++|.|++.++.||+..+++++|+|++++|++||+|++||+.+.+. ++|++|++++.+|||
T Consensus 1 m~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp 80 (417)
T PRK06025 1 MAEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYD 80 (417)
T ss_pred CCceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCC
Confidence 468999999999999 8 589999999999999999999999999999999999999988774 789999999999999
Q ss_pred CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCC
Q psy4156 113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA 158 (160)
Q Consensus 113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~ 158 (160)
.++|+++|||+|+||++|+.+|+++|++|..+++|+||+|+||+..
T Consensus 81 ~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P 126 (417)
T PRK06025 81 IKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTA 126 (417)
T ss_pred CCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCc
Confidence 9999999999999999999999999999999999999999999754
No 3
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.97 E-value=7.8e-30 Score=221.96 Aligned_cols=122 Identities=34% Similarity=0.518 Sum_probs=115.2
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNE 114 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~ 114 (160)
|++|||+|+.|||||+++|.+++.+++||+.++++++|+| ++|+|++||.+++||+.+.+. +++++|.+++.+|||.+
T Consensus 1 m~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~ 80 (400)
T PRK13359 1 MTEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHG 80 (400)
T ss_pred CCcEEEEeccCCCccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 4679999999999999999999999999999999999997 599999999999999987664 68899999999999978
Q ss_pred CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCC
Q psy4156 115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA 158 (160)
Q Consensus 115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~ 158 (160)
+|+++||++|+||++|+.+|+++|++|..|++|++|+||||...
T Consensus 81 vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p 124 (400)
T PRK13359 81 VPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAP 124 (400)
T ss_pred CceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCc
Confidence 99999999999999999999999999999999999999999753
No 4
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.96 E-value=2.1e-29 Score=218.67 Aligned_cols=121 Identities=26% Similarity=0.381 Sum_probs=114.1
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNEV 115 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~v 115 (160)
|++|||+|++||||++++|.+++.+++||+.+|++++|+|++++|++||.+++||+.+.+ ++++++|...+..|||.++
T Consensus 1 m~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~v 80 (390)
T PRK06504 1 MAEAYIVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESV 80 (390)
T ss_pred CCceEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 468999999999999999999999999999999999999999999999999999998654 3578999999999998899
Q ss_pred ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
|+++||++|+||++|+..|+++|++|.+|+++++|+||||..
T Consensus 81 P~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~ 122 (390)
T PRK06504 81 PGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRV 122 (390)
T ss_pred ceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCC
Confidence 999999999999999999999999999999999999999953
No 5
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.96 E-value=2.5e-29 Score=217.80 Aligned_cols=121 Identities=30% Similarity=0.350 Sum_probs=113.9
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNEV 115 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~v 115 (160)
|++|||+|++||||+|+.|.+++.++.||+.++++++|+|+|++|++||.+++||+.+.+. +.+++|.+++.+|+|.++
T Consensus 1 m~~V~Ivg~~rTpfgk~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~ 80 (387)
T PRK07850 1 MGNPVIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV 80 (387)
T ss_pred CCcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC
Confidence 4689999999999999989999999999999999999999999999999999999986543 478999999999999789
Q ss_pred ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
|+++||++|+||++|+++|++.|++|..|++|++|+||||..
T Consensus 81 p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~ 122 (387)
T PRK07850 81 GATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRV 122 (387)
T ss_pred ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCC
Confidence 999999999999999999999999999999999999999964
No 6
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.96 E-value=1.7e-29 Score=219.48 Aligned_cols=120 Identities=43% Similarity=0.635 Sum_probs=114.7
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA 117 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa 117 (160)
++|||+++.||||++++|.|+++++++|+.++++++|+|+||+|++||.+++||+.+.+.+++++|++++.+|+|.++|+
T Consensus 3 ~~~~iv~~~Rtp~~~~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~ 82 (392)
T PRK06633 3 KPVYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPG 82 (392)
T ss_pred CCEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccc
Confidence 58999999999999999999999999999999999999999999999999999998766677899999999999877999
Q ss_pred EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
++||++|+||++|+++|++.|++|.+|+++++|+||||..
T Consensus 83 ~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~ 122 (392)
T PRK06633 83 YTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLG 122 (392)
T ss_pred hhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCC
Confidence 9999999999999999999999999999999999999964
No 7
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=99.96 E-value=7.8e-29 Score=215.71 Aligned_cols=121 Identities=31% Similarity=0.451 Sum_probs=114.5
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNEV 115 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~v 115 (160)
|++|||+|++|||||++.|.+++.+++||+.+|++++|+++|++|++||.+++||+.+.+ ++++++|++++.+|+|.++
T Consensus 1 ~~~v~Iv~~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~ 80 (401)
T PRK08131 1 MLDAYIYDGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTV 80 (401)
T ss_pred CCcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCC
Confidence 568999999999999999999999999999999999999999999999999999998765 3578999999999999789
Q ss_pred ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
|+++||++|+||++|++.|++.|++|.+|+++++|+||||..
T Consensus 81 p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~ 122 (401)
T PRK08131 81 PGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRA 122 (401)
T ss_pred ceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCC
Confidence 999999999999999999999999999999999999999964
No 8
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.96 E-value=8.2e-29 Score=215.58 Aligned_cols=121 Identities=32% Similarity=0.513 Sum_probs=113.9
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNE 114 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~ 114 (160)
|++|||+|++||||+++.|.+++.+++||+.+|++++|+| ++|+|++||.+++||+.+.++ +++++|.+++.+|+|.+
T Consensus 1 M~~V~Ivg~~rTpfgk~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~ 80 (401)
T PRK09050 1 MTEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVS 80 (401)
T ss_pred CCcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCC
Confidence 4689999999999999889999999999999999999996 799999999999999987665 47899999999999878
Q ss_pred CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+|+++||++|+||++|++.|++.|++|.+|+++++|+||||..
T Consensus 81 vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~ 123 (401)
T PRK09050 81 VPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRA 123 (401)
T ss_pred CceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccC
Confidence 9999999999999999999999999999999999999999964
No 9
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=99.96 E-value=1.1e-28 Score=216.59 Aligned_cols=122 Identities=20% Similarity=0.292 Sum_probs=115.7
Q ss_pred cCCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156 35 LSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE 114 (160)
Q Consensus 35 ~~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~ 114 (160)
+..++|||+|++||||++++|.+++.++.||+.++++++|+|++|+|++||.+++||+.+...+++++|.+++.+|||..
T Consensus 4 ~~~~~V~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~ 83 (430)
T TIGR02446 4 RQGERIAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVH 83 (430)
T ss_pred CcCCCEEEEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCC
Confidence 45678999999999999999999999999999999999999999999999999999998755567899999999999988
Q ss_pred CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
+|+++|+++|+||++|+++|++.|++|.++++|++|+||||.
T Consensus 84 ~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 84 TDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSV 125 (430)
T ss_pred CchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccC
Confidence 999999999999999999999999999999999999999985
No 10
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.96 E-value=2e-28 Score=213.31 Aligned_cols=121 Identities=27% Similarity=0.388 Sum_probs=114.2
Q ss_pred CCceEEEeeeeccccc--cCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCC
Q psy4156 37 DNDVVIVSAARTPIGS--FLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPN 113 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~--~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~ 113 (160)
|++|||+++.|||||+ +.|.|+++++.||+.+|++++|+++||+|++||.+++||+.+.+. +++++|.+++.+|+|.
T Consensus 1 m~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~ 80 (402)
T PRK08242 1 MTEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPE 80 (402)
T ss_pred CCcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCC
Confidence 5689999999999998 589999999999999999999999999999999999999998654 5689999999999987
Q ss_pred CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
++|+++||++|+||++|++.|+++|++|.++++|++|+|+||..
T Consensus 81 ~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~ 124 (402)
T PRK08242 81 TVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRV 124 (402)
T ss_pred CCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCC
Confidence 79999999999999999999999999999999999999999974
No 11
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.95 E-value=2.4e-28 Score=213.97 Aligned_cols=121 Identities=21% Similarity=0.307 Sum_probs=114.4
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP 116 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP 116 (160)
.++|||+|++||||+++.|.+++.++.||+.+|++++|+|+||+|++||.+++||+.+..++++++|.+++.+|+|.++|
T Consensus 4 ~~~v~Ivg~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P 83 (428)
T PRK08963 4 GDRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTD 83 (428)
T ss_pred CCeEEEEecccCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCc
Confidence 46899999999999998899999999999999999999999999999999999998876666789999999999987799
Q ss_pred eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+++|+++|+||++|++.|++.|++|.+|++|++|+||||..
T Consensus 84 ~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~ 124 (428)
T PRK08963 84 AYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVL 124 (428)
T ss_pred ceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCC
Confidence 99999999999999999999999999999999999999953
No 12
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.95 E-value=4.5e-28 Score=210.79 Aligned_cols=125 Identities=26% Similarity=0.393 Sum_probs=116.1
Q ss_pred cccCCCceEEEeeeeccccc-cCccCCCCCHHHHHHHHHHHHHHHc-CCCccccCceEEEeeecCC-CCCChHHHHHHHc
Q psy4156 33 MVLSDNDVVIVSAARTPIGS-FLGSLSELKAHDLGSTAIKEVLKRA-NVLPNEISEVILGQALTAG-QGQNPARQASIKA 109 (160)
Q Consensus 33 ~~~~m~~V~Ivg~~rTpfg~-~~g~~~~~~~~dL~~~A~~~aL~~a-gI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~ 109 (160)
|.++|++|||+|++||||++ +.|.|++.++.||+.+|++++|+++ |++|++||.+++||+.++. ++++.+|.+.+.+
T Consensus 1 ~~~~m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~ 80 (399)
T PRK09052 1 MSKQLQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLA 80 (399)
T ss_pred CCCCCCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHc
Confidence 46789999999999999999 6899999999999999999999997 9999999999999998765 4567899888899
Q ss_pred CCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 110 NIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 110 GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
|++.++|+++||++|+||++|++.|+++|++|.+++++++|+|+||..
T Consensus 81 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~ 128 (399)
T PRK09052 81 GLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMV 128 (399)
T ss_pred CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccC
Confidence 998669999999999999999999999999999999999999999864
No 13
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.95 E-value=5.7e-28 Score=209.63 Aligned_cols=121 Identities=31% Similarity=0.505 Sum_probs=113.3
Q ss_pred CCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNE 114 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~ 114 (160)
|++|||+|++||||+++ .+.++++++.||+.+|++++|+|+|++|++||.+++|++.+++. +++++|.+++.+|+|.+
T Consensus 1 M~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~ 80 (392)
T PRK07108 1 MTEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVT 80 (392)
T ss_pred CCcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCC
Confidence 46899999999999984 78889999999999999999999999999999999999998764 45799999999999867
Q ss_pred CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+|+++||++|+||++|+++|+++|++|.+++++++|+||||..
T Consensus 81 ~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~ 123 (392)
T PRK07108 81 VPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCV 123 (392)
T ss_pred CceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCC
Confidence 9999999999999999999999999999999999999999964
No 14
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=99.95 E-value=5.1e-28 Score=210.61 Aligned_cols=120 Identities=37% Similarity=0.532 Sum_probs=112.7
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCCC
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNEV 115 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~v 115 (160)
++|||+|++||||+++.|.+++++++||+.++++++|+| ++|+|++||.+++||+.+.++ +++++|.+++.+|+|.++
T Consensus 1 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~ 80 (400)
T TIGR02430 1 REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV 80 (400)
T ss_pred CcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 369999999999999889999999999999999999996 699999999999999987554 578999999999998779
Q ss_pred ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
|+++||++|+||++|+..|++.|++|.+++++++|+||||..
T Consensus 81 p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~ 122 (400)
T TIGR02430 81 PGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRA 122 (400)
T ss_pred ceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCC
Confidence 999999999999999999999999999999999999999964
No 15
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.95 E-value=7.5e-28 Score=208.88 Aligned_cols=121 Identities=45% Similarity=0.631 Sum_probs=114.0
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP 116 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP 116 (160)
|++|||+|++||||++++|.++++++.||+.+|++++|+++|++|++||.+++|++.+.+++++++|.++..+|+|.++|
T Consensus 1 M~~v~Ivg~~rTpfg~~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p 80 (393)
T PRK08235 1 MSKTVIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQ 80 (393)
T ss_pred CCcEEEEecCcCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcc
Confidence 46799999999999999899999999999999999999999999999999999999875566789999999999986899
Q ss_pred eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+++|+++|+||++|++.|+++|++|.+++++++|+|+||..
T Consensus 81 ~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~ 121 (393)
T PRK08235 81 TETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNA 121 (393)
T ss_pred eeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccC
Confidence 99999999999999999999999999999999999999963
No 16
>KOG1390|consensus
Probab=99.95 E-value=4.7e-28 Score=203.74 Aligned_cols=123 Identities=48% Similarity=0.684 Sum_probs=119.1
Q ss_pred CCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC
Q psy4156 36 SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV 115 (160)
Q Consensus 36 ~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v 115 (160)
.+++|+|+++.|||+|.++|+|+.+++.+|+..|++++|+|+.++|+|++.+|+||+.+...|++++|++++-+|||.++
T Consensus 4 ~~k~V~IVsaARTPIGsF~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv 83 (396)
T KOG1390|consen 4 SSKDVFIVSAARTPIGSFRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSV 83 (396)
T ss_pred CCCceEEEeeccccccccccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcce
Confidence 35699999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCC
Q psy4156 116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA 158 (160)
Q Consensus 116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~ 158 (160)
|+++||..|+|||.|+.+|++.|++|..|++++||+|+||-..
T Consensus 84 ~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP 126 (396)
T KOG1390|consen 84 PATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVP 126 (396)
T ss_pred eeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCc
Confidence 9999999999999999999999999999999999999999764
No 17
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.95 E-value=1.9e-27 Score=206.86 Aligned_cols=121 Identities=29% Similarity=0.492 Sum_probs=114.6
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP 116 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP 116 (160)
|++|||+|++||||+|+.|.+++.++.||+.+|++++|++++++|++||.+++|++.+...+++++|.+++.+|++..+|
T Consensus 1 m~~v~Ivg~~rTpfgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p 80 (404)
T PRK06205 1 MRDAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVP 80 (404)
T ss_pred CCceEEEEeecCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc
Confidence 46899999999999999999999999999999999999999999999999999999887767788999999999986799
Q ss_pred eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+++|+++|+||++|++.|+++|++|.+++++++|+|+||..
T Consensus 81 ~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~ 121 (404)
T PRK06205 81 GMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNV 121 (404)
T ss_pred eeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccC
Confidence 99999999999999999999999999999999999999953
No 18
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.95 E-value=2.8e-27 Score=205.08 Aligned_cols=121 Identities=46% Similarity=0.709 Sum_probs=113.9
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP 116 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP 116 (160)
|++|||+|++||||+|++|.++++++.||+.+|++++|+++|++|++||.+++|++.+.++++++++.++..+|++.++|
T Consensus 1 m~~v~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p 80 (393)
T PRK05656 1 MQDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVP 80 (393)
T ss_pred CCcEEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcc
Confidence 46899999999999999899999999999999999999999999999999999999876566788999999999985699
Q ss_pred eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+++|+++|+||++|++.|+++|++|.+++++++|+|+||..
T Consensus 81 ~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~ 121 (393)
T PRK05656 81 AMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLA 121 (393)
T ss_pred eEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccC
Confidence 99999999999999999999999999999999999999973
No 19
>PRK09051 beta-ketothiolase; Provisional
Probab=99.95 E-value=3.6e-27 Score=204.78 Aligned_cols=121 Identities=35% Similarity=0.561 Sum_probs=113.4
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNEV 115 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~v 115 (160)
|++|||+|++||||++++|.+++.++.||+.+|++++|+++|++|++||.+++|++.+.+. .++.+|.+++.+|++.++
T Consensus 2 m~~v~Ivg~~rtp~g~~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~ 81 (394)
T PRK09051 2 MREVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQET 81 (394)
T ss_pred CCcEEEEecccCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCC
Confidence 4689999999999999989999999999999999999999999999999999999987653 467899999999997579
Q ss_pred ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
|+++|+++|+||++|++.|+++|++|.+++++++|+|+||..
T Consensus 82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~ 123 (394)
T PRK09051 82 PAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRA 123 (394)
T ss_pred ceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccC
Confidence 999999999999999999999999999999999999999964
No 20
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.95 E-value=2.9e-27 Score=205.36 Aligned_cols=119 Identities=39% Similarity=0.638 Sum_probs=112.7
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA 117 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa 117 (160)
++|||+|++||||+++.|.+++.++.||+.+|++++|+|+||+|++||.+++||+.+.+++.+++|..++.+|+|.++|+
T Consensus 7 ~~V~Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~ 86 (397)
T PRK06954 7 DPIVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGC 86 (397)
T ss_pred CCEEEEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccE
Confidence 58999999999999988999999999999999999999999999999999999998766666788888899999977999
Q ss_pred EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
++|+++|+||++|++.|+++|++|.+|+++++|+||||.
T Consensus 87 ~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 87 TTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTN 125 (397)
T ss_pred eeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCC
Confidence 999999999999999999999999999999999999994
No 21
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.94 E-value=8.2e-27 Score=201.93 Aligned_cols=120 Identities=40% Similarity=0.561 Sum_probs=112.4
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP 116 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP 116 (160)
|++|||+|++||||+|+.|.+++.++.+|+.+|++++|+|+||+|++||.+++||+.+.+.+++++|.+++.+|+|.++|
T Consensus 1 M~~v~Ivg~~rTp~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p 80 (388)
T PRK06366 1 MKDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVT 80 (388)
T ss_pred CCcEEEEEcccCCcccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCc
Confidence 46799999999999999899999999999999999999999999999999999999765555678899999999986799
Q ss_pred eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
+++++++|+||++|+..|++.|++|..++++++|+||||.
T Consensus 81 ~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~ 120 (388)
T PRK06366 81 KYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSN 120 (388)
T ss_pred ceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEcccc
Confidence 9999999999999999999999999999999999999983
No 22
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=99.94 E-value=1.1e-26 Score=203.65 Aligned_cols=122 Identities=19% Similarity=0.302 Sum_probs=114.4
Q ss_pred CCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC
Q psy4156 36 SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV 115 (160)
Q Consensus 36 ~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v 115 (160)
+|++|||+|++||||+++.|.|++.++.||+.+|++++|++++++|++||.+++||+.+...+++++|.+++..|++..+
T Consensus 5 ~m~~V~Ivg~~rTpfg~~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~ 84 (427)
T PRK09268 5 TVRRVAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYT 84 (427)
T ss_pred CCCCEEEEecCcCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCC
Confidence 57889999999999999889999999999999999999999999999999999999987544578999999999998679
Q ss_pred ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
|+++|+++|+||++|+..|+++|++|.+|+++++|+|+||..
T Consensus 85 p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~ 126 (427)
T PRK09268 85 PAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDA 126 (427)
T ss_pred ceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCC
Confidence 999999999999999999999999999999999999999954
No 23
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.94 E-value=8.2e-27 Score=202.36 Aligned_cols=121 Identities=35% Similarity=0.511 Sum_probs=112.2
Q ss_pred CCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNE 114 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~ 114 (160)
|++|||+|++||||+++ .|.|++.++.||+.+|++++|+++|+.+++||.+++||+.++. ++++++|.+++.+|+|.+
T Consensus 1 M~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~ 80 (391)
T PRK07661 1 MREAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYT 80 (391)
T ss_pred CCcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCC
Confidence 45799999999999985 7899999999999999999999999888999999999988765 357899999999999856
Q ss_pred CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+|+++|+++|+||++|+..|+++|++|.+++++++|+||||..
T Consensus 81 ~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~ 123 (391)
T PRK07661 81 VPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLV 123 (391)
T ss_pred cceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccC
Confidence 9999999999999999999999999999999999999999953
No 24
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.94 E-value=8.8e-27 Score=201.85 Aligned_cols=121 Identities=34% Similarity=0.476 Sum_probs=112.6
Q ss_pred CCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCC
Q psy4156 37 DNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPN 113 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~ 113 (160)
|++|||+|++||||+++ .|.+++.++++|+.++++++|++ +||+|++||.+++|++.+... +++++|.+++.+|+|.
T Consensus 1 M~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~ 80 (387)
T PRK08947 1 MEDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPH 80 (387)
T ss_pred CCcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCC
Confidence 46899999999999985 89999999999999999999997 799999999999999876554 5789999999999997
Q ss_pred CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
++|+++||++|+||++|+.+|+++|++|.+|+++++|+||||..
T Consensus 81 ~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~ 124 (387)
T PRK08947 81 SVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHV 124 (387)
T ss_pred CCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccC
Confidence 79999999999999999999999999999999999999999964
No 25
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=99.94 E-value=3.2e-26 Score=201.35 Aligned_cols=129 Identities=20% Similarity=0.129 Sum_probs=116.3
Q ss_pred cccccccCCCceEEEeeeeccc-cc----c-------CccCCCCCHHHHHHHHHHHHHHHcCCCccc--cCceEEEeeec
Q psy4156 29 TRSTMVLSDNDVVIVSAARTPI-GS----F-------LGSLSELKAHDLGSTAIKEVLKRANVLPNE--ISEVILGQALT 94 (160)
Q Consensus 29 ~~~~~~~~m~~V~Ivg~~rTpf-g~----~-------~g~~~~~~~~dL~~~A~~~aL~~agI~~~~--ID~vi~G~~~~ 94 (160)
..|+.+..|++|||+|++|||| || + .|.+++.+++||+.+|++++|+++||+|++ ||.+++|++.+
T Consensus 3 ~~~~~~~~~~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~ 82 (438)
T PTZ00455 3 RSSLTTQAAKRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLG 82 (438)
T ss_pred ccccchhhcCceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccc
Confidence 3466677788999999999999 87 2 577789999999999999999999999999 99999999976
Q ss_pred CC--CCCChHHHHHHHcCCC------CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 95 AG--QGQNPARQASIKANIP------NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 95 ~~--~g~~~ar~~al~~GLp------~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
.. .+++++|.+++.+|+| ..+|+++|+++|+||++|+..|++.|++|.+++++++|+||||..
T Consensus 83 ~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~ 153 (438)
T PTZ00455 83 ELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTV 153 (438)
T ss_pred cccccccchHHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccC
Confidence 54 3468999999888887 689999999999999999999999999999999999999999874
No 26
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=99.94 E-value=1.6e-26 Score=200.13 Aligned_cols=119 Identities=32% Similarity=0.428 Sum_probs=110.7
Q ss_pred ceEEEeeeeccccc-cCccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCCC
Q psy4156 39 DVVIVSAARTPIGS-FLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNEV 115 (160)
Q Consensus 39 ~V~Ivg~~rTpfg~-~~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~v 115 (160)
+|||+|++||||++ +.|.+++.++.||+.+|++++|++ ++++|++||.+++||+.+.. ++++++|.+.+.+|+|.++
T Consensus 1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~ 80 (385)
T TIGR02445 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS 80 (385)
T ss_pred CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence 48999999999998 488999999999999999999997 59999999999999997544 3567999999999999889
Q ss_pred ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
|+++||++|+||++|++.|++.|++|..|++|++|+||||..
T Consensus 81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~ 122 (385)
T TIGR02445 81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHV 122 (385)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccC
Confidence 999999999999999999999999999999999999999864
No 27
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.93 E-value=2.5e-25 Score=194.79 Aligned_cols=120 Identities=28% Similarity=0.371 Sum_probs=111.8
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP 116 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP 116 (160)
+++|||+|++||||+++.|.+++.++.||+.+|++++|+++|++|++||.+++|+..+..+.+++++.++..+|++.++|
T Consensus 2 ~~~v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p 81 (426)
T PRK08170 2 ARPVYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVP 81 (426)
T ss_pred CCcEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCce
Confidence 36899999999999998888888999999999999999999999999999999998865445678999999999976799
Q ss_pred eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
+++++++|+||++|++.|+++|++|.+++++++|+|+||.
T Consensus 82 ~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 82 AWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSH 121 (426)
T ss_pred eeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccC
Confidence 9999999999999999999999999999999999999986
No 28
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.93 E-value=2.3e-25 Score=193.09 Aligned_cols=120 Identities=25% Similarity=0.412 Sum_probs=111.1
Q ss_pred CCceEEEeeeecccccc------CccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHc
Q psy4156 37 DNDVVIVSAARTPIGSF------LGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKA 109 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~------~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~ 109 (160)
|++|||+|++||||+++ +|.|++.++.||+.+|++++|+|+|++|++||.+++|++.+++. +.+.+|...+..
T Consensus 1 m~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a 80 (394)
T PRK06445 1 LEDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLA 80 (394)
T ss_pred CCcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHc
Confidence 45799999999999987 58999999999999999999999999999999999999987653 456788888888
Q ss_pred CCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 110 NIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 110 GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
+++.++|+++|+++|+||++|++.|+++|++|.+++++++|+|+||.
T Consensus 81 ~~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~ 127 (394)
T PRK06445 81 RLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTR 127 (394)
T ss_pred CCCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccc
Confidence 88878999999999999999999999999999999999999999984
No 29
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.92 E-value=7.8e-25 Score=193.31 Aligned_cols=121 Identities=29% Similarity=0.426 Sum_probs=111.2
Q ss_pred CCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNE 114 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~ 114 (160)
.++|||+|++||||+++ ++.+++.++.||+.+|++++|+|+|++++|||.+++|++.+... .++.+|.+++.+|++..
T Consensus 45 ~~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~ 124 (452)
T PLN02287 45 GDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPET 124 (452)
T ss_pred CCCEEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCC
Confidence 35899999999999984 78888999999999999999999999999999999999976553 45678999999999866
Q ss_pred CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+|+++|+++|+||++|++.|+++|++|.+++++++|+|+||..
T Consensus 125 ~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~ 167 (452)
T PLN02287 125 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTN 167 (452)
T ss_pred cceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCC
Confidence 9999999999999999999999999999999999999999864
No 30
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.92 E-value=7.4e-25 Score=190.08 Aligned_cols=118 Identities=44% Similarity=0.641 Sum_probs=110.2
Q ss_pred ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156 39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS 118 (160)
Q Consensus 39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~ 118 (160)
+|||+|++||||+++.+.+++.++.||+.+|++++|+|+|+++++||.+++|++.+.+.+++.+|.+++.+|++.++|++
T Consensus 2 ~v~IvG~~~Tp~g~~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~ 81 (394)
T PLN02644 2 DVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICT 81 (394)
T ss_pred cEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceE
Confidence 69999999999999888889999999999999999999999999999999999876444567888899999998679999
Q ss_pred EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
+|+++|+||++|+..|++.|++|..++++++|+|+||.
T Consensus 82 ~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~ 119 (394)
T PLN02644 82 TVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSN 119 (394)
T ss_pred EEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCC
Confidence 99999999999999999999999999999999999984
No 31
>PRK05790 putative acyltransferase; Provisional
Probab=99.92 E-value=1.6e-24 Score=187.35 Aligned_cols=120 Identities=50% Similarity=0.745 Sum_probs=111.7
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP 116 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP 116 (160)
|++|+|+|++||||+|+.|.+++.++.||+.+|++++|+++|++|+|||.+++|++.+...++++++.+++..|++.++|
T Consensus 1 M~~v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~ 80 (393)
T PRK05790 1 MKDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVP 80 (393)
T ss_pred CCceEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCc
Confidence 46899999999999998888999999999999999999999999999999999998876556678888888899986689
Q ss_pred eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
+++++++|+||+.|+..|+++|++|..++++++|+|+||.
T Consensus 81 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 120 (393)
T PRK05790 81 ALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQ 120 (393)
T ss_pred eeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeecccc
Confidence 9999999999999999999999999999999999999975
No 32
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.91 E-value=2.6e-24 Score=187.46 Aligned_cols=120 Identities=27% Similarity=0.405 Sum_probs=110.0
Q ss_pred CCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHHc-CCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCC
Q psy4156 37 DNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKRA-NVLPNEISEVILGQALTAG-QGQNPARQASIKANIPN 113 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~a-gI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~ 113 (160)
|++|+|+|++||||+++ +|.|++.++.||+.+|++++|+++ |++|++||.+++|++.+.. ++++.+|.++..+|++
T Consensus 1 m~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~- 79 (406)
T PRK07851 1 MPEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD- 79 (406)
T ss_pred CCcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-
Confidence 35799999999999984 788999999999999999999997 9999999999999877543 3567889999999996
Q ss_pred CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
++|+++|+++|+||+.|++.|++.|++|.+++++++|+|+||..
T Consensus 80 ~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~ 123 (406)
T PRK07851 80 FLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRF 123 (406)
T ss_pred CCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccC
Confidence 79999999999999999999999999999999999999999853
No 33
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=99.91 E-value=1.6e-24 Score=188.18 Aligned_cols=123 Identities=42% Similarity=0.580 Sum_probs=114.7
Q ss_pred CCceEEEeeeeccccccC-ccCCCCCHHHHHHHHHHHHHHHc--CCCccccCceEEEeeecCC-CCCChHHHHHHHcCCC
Q psy4156 37 DNDVVIVSAARTPIGSFL-GSLSELKAHDLGSTAIKEVLKRA--NVLPNEISEVILGQALTAG-QGQNPARQASIKANIP 112 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~-g~~~~~~~~dL~~~A~~~aL~~a--gI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp 112 (160)
|++|+|+|++|||||++. +.++++.+++|...+.++.+++. +|++.+||.+++||+.+.+ ++++++|.+++.+|+|
T Consensus 1 ~~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~ 80 (392)
T COG0183 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLP 80 (392)
T ss_pred CceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCC
Confidence 578999999999999996 99999999999999999999754 7999999999999999886 5779999999999999
Q ss_pred CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCCC
Q psy4156 113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADAH 159 (160)
Q Consensus 113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~~ 159 (160)
.++|+++||++|+||++|++.|++.|++|.+|+++++|+||||...+
T Consensus 81 ~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~ 127 (392)
T COG0183 81 GSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPM 127 (392)
T ss_pred CCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCc
Confidence 77999999999999999999999999999999999999999998653
No 34
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.91 E-value=1.8e-24 Score=186.29 Aligned_cols=114 Identities=26% Similarity=0.385 Sum_probs=106.4
Q ss_pred ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156 39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS 118 (160)
Q Consensus 39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~ 118 (160)
+|||+|++|||||++.|.++++++++|+.+|++++++ |++ ++||.+++||+.+. +++++|.+++.+|+|.++|++
T Consensus 2 ~v~Ivg~~rTpfg~~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~--~~~~~r~~~~~~Gl~~~~p~~ 76 (361)
T PRK06690 2 RAVIVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP--GGNVARLSALEAGLGLHIPGV 76 (361)
T ss_pred cEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC--cchHHHHHHHHcCCCCCCCce
Confidence 5999999999999999999999999999999999855 896 89999999999653 467899999999998889999
Q ss_pred EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+|+++|+||++|+..|++.|++|..++.+++|+|+||..
T Consensus 77 tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~ 115 (361)
T PRK06690 77 TIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTS 115 (361)
T ss_pred ehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCC
Confidence 999999999999999999999999999999999999964
No 35
>KOG1389|consensus
Probab=99.91 E-value=1.1e-24 Score=183.36 Aligned_cols=124 Identities=27% Similarity=0.410 Sum_probs=117.1
Q ss_pred ccCCCceEEEeeeeccccc-cCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCC
Q psy4156 34 VLSDNDVVIVSAARTPIGS-FLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIP 112 (160)
Q Consensus 34 ~~~m~~V~Ivg~~rTpfg~-~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp 112 (160)
..+.+||+|+++.|||++| .+|.|||..++||...+.++.+++.+++|++|+++++|++..++.+...+|..++++|+|
T Consensus 32 ~~~~~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P 111 (435)
T KOG1389|consen 32 AASAEDVVIVAALRTAICKAKRGGFKDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFP 111 (435)
T ss_pred cccccCEEEEeeccchhhhcccCCcccCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCC
Confidence 3345799999999999996 589999999999999999999999999999999999999998887766889999999999
Q ss_pred CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+++|..+|||+|+||++|+...+..|++|+||+.+.+|+|+||..
T Consensus 112 ~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 112 ETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTN 156 (435)
T ss_pred cccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhccc
Confidence 999999999999999999999999999999999999999999976
No 36
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.91 E-value=4.9e-24 Score=183.99 Aligned_cols=120 Identities=29% Similarity=0.484 Sum_probs=109.7
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNEV 115 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~v 115 (160)
|++|+|+|++||||+++.+.+++.++.+|+.+|++++|+|+|++|++||.+++|++.+.. +.++++|...+..|++..+
T Consensus 1 M~~v~Ivg~~~Tpf~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~ 80 (382)
T PRK07801 1 MAEAYIVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV 80 (382)
T ss_pred CCceEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC
Confidence 468999999999999988888899999999999999999999999999999999874433 3356889888889998779
Q ss_pred ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
|+++++++|+||+.|++.|++.|++|..++++++|+|+||.
T Consensus 81 p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~ 121 (382)
T PRK07801 81 PGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQ 121 (382)
T ss_pred ceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcC
Confidence 99999999999999999999999999999999999999975
No 37
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.89 E-value=4.7e-23 Score=177.84 Aligned_cols=116 Identities=46% Similarity=0.741 Sum_probs=108.1
Q ss_pred EEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEE
Q psy4156 41 VIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLV 120 (160)
Q Consensus 41 ~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V 120 (160)
+|+|++||||+++.+.+++.++.||+.+|++++|+++|++++|||.+++|+..+...+++.++.++..+|++.++|+++|
T Consensus 1 ~Ivg~~~Tpf~r~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v 80 (386)
T cd00751 1 VIVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTV 80 (386)
T ss_pred CEEEeecCCccCCCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhh
Confidence 59999999999998888899999999999999999999999999999999887766667788889999999745899999
Q ss_pred cccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 121 NMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 121 ~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
+++|+||++|+..|+++|++|.+++++++|+|+||.
T Consensus 81 ~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 116 (386)
T cd00751 81 NRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSR 116 (386)
T ss_pred ccccHHHHHHHHHHHHHHHCCCCCeEEEeeeecccc
Confidence 999999999999999999999999999999999975
No 38
>KOG1391|consensus
Probab=99.89 E-value=3.1e-23 Score=171.56 Aligned_cols=121 Identities=34% Similarity=0.528 Sum_probs=116.0
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNEV 115 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~v 115 (160)
.+-|+|++++||+||.++|.+|+++..||...|++++|..+++.++.+|.||+||+.... ++.|++|++-+..|.|+++
T Consensus 3 ~kgvfiVaAKRTaFGtfGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~ 82 (396)
T KOG1391|consen 3 GKGVFIVAAKRTAFGTFGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKET 82 (396)
T ss_pred cceEEEEEecccccccccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCcc
Confidence 467999999999999999999999999999999999999999999999999999998765 5789999999999999999
Q ss_pred ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
|+++|||.|+||.|++..+++.|.-|..++++.||.|+||-.
T Consensus 83 pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~ 124 (396)
T KOG1391|consen 83 PALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQA 124 (396)
T ss_pred CceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccC
Confidence 999999999999999999999999999999999999999964
No 39
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.88 E-value=3.3e-22 Score=172.92 Aligned_cols=116 Identities=43% Similarity=0.609 Sum_probs=107.2
Q ss_pred EEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc
Q psy4156 42 IVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN 121 (160)
Q Consensus 42 Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~ 121 (160)
|+|++||||+|+.|.+++.++.+|+.+|++++|+++|++++|||.+++|+..+....++.++.++..+|++.++|+++++
T Consensus 1 IvG~~~tp~~~~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~ 80 (386)
T TIGR01930 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN 80 (386)
T ss_pred CcceecCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec
Confidence 68999999999888899999999999999999999999999999999998876654567788899999997569999999
Q ss_pred ccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 122 MLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 122 ~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
++|+||+.|+..|+++|++|.+++++++|+|+||..
T Consensus 81 ~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~ 116 (386)
T TIGR01930 81 RQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRV 116 (386)
T ss_pred chhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccC
Confidence 999999999999999999999999999999999864
No 40
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.87 E-value=8e-22 Score=173.08 Aligned_cols=117 Identities=11% Similarity=-0.028 Sum_probs=103.8
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHH-HHHcCCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQA-SIKANIPNEV 115 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~-al~~GLp~~v 115 (160)
|++|+|+|++||||+++ +++.+..||+.+|++++|+++|+++++||.+++++..+...++++++.. +..+|++ .+
T Consensus 15 m~~VaIvG~g~Tpfgr~---~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~ 90 (430)
T PRK06365 15 SRDVYMVAAGVTKFDKA---SPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PK 90 (430)
T ss_pred ccCEEEEEeeecCcccc---CCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CC
Confidence 67899999999999984 2467789999999999999999999999999988766544555667664 6889997 59
Q ss_pred ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
|+++|+++|+||..|+..|++.|++|.+++++++|+||||..
T Consensus 91 ~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~ 132 (430)
T PRK06365 91 PSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHV 132 (430)
T ss_pred ceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccc
Confidence 999999999999999999999999999999999999999863
No 41
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.87 E-value=5.7e-22 Score=172.07 Aligned_cols=114 Identities=34% Similarity=0.463 Sum_probs=102.8
Q ss_pred EeeeeccccccC---ccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHH-cCCCCCCceE
Q psy4156 43 VSAARTPIGSFL---GSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIK-ANIPNEVPAS 118 (160)
Q Consensus 43 vg~~rTpfg~~~---g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~-~GLp~~vPa~ 118 (160)
+|++||||+++. |.++...+.||+.+|++++|++++|+|++||.+++|+..+...++++++..... .|+ .++|++
T Consensus 1 ~g~~~Tpfg~~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~-~~~p~~ 79 (393)
T cd00826 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGL-QEAPAI 79 (393)
T ss_pred CccccCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCC-CCCcEE
Confidence 478999999987 888899999999999999999999999999999999998876667788864444 555 589999
Q ss_pred EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+|+++|+||++|+..|+++|++|.+++++++|+|+||..
T Consensus 80 ~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~ 118 (393)
T cd00826 80 GMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETS 118 (393)
T ss_pred EecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccC
Confidence 999999999999999999999999999999999999853
No 42
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.86 E-value=2.7e-21 Score=166.86 Aligned_cols=114 Identities=18% Similarity=0.219 Sum_probs=104.7
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA 117 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa 117 (160)
++|+|+|.+.|||+++ ++.++.+|+.+|++++|+++||+|++||.+++|+..+.++..++++.++..+|++ ..|.
T Consensus 1 ~~v~IvG~g~t~~~~~----~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~ 75 (385)
T PRK12578 1 RRVAVIGVGNSKFGRR----DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVP 75 (385)
T ss_pred CceEEEeecccceeec----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCe
Confidence 4799999999999997 5789999999999999999999999999999999876544456789999999997 5788
Q ss_pred EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
++|+++|+||+.|+..|+++|++|..++++++|.|+||.
T Consensus 76 ~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~ 114 (385)
T PRK12578 76 LRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTE 114 (385)
T ss_pred eEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 999999999999999999999999999999999999985
No 43
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.86 E-value=3.2e-21 Score=167.58 Aligned_cols=114 Identities=18% Similarity=0.193 Sum_probs=100.2
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA 117 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa 117 (160)
++|+|+|++||||+++ ++.++.+|+.++++++|+++||+|+|||.+++|++.+.......+..++..+|++ ++|+
T Consensus 7 ~~v~IvG~g~tp~~~~----~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~ 81 (398)
T PRK06157 7 DKVAILGMGCTKFGER----WDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPV 81 (398)
T ss_pred CCeEEEEecccccccc----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCE
Confidence 5799999999999986 5788999999999999999999999999999998764321112234566788997 6999
Q ss_pred EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
++|+++|+||+.|+++|++.|++|..++++++|+||||.
T Consensus 82 ~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 82 TRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKD 120 (398)
T ss_pred EEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 999999999999999999999999999999999999986
No 44
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.86 E-value=3.8e-21 Score=166.27 Aligned_cols=116 Identities=17% Similarity=0.130 Sum_probs=99.6
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCC--CChHHHHHHHcCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG--QNPARQASIKANIPNE 114 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g--~~~ar~~al~~GLp~~ 114 (160)
|++|+|+|++||||+|+ ++.++.+|+.+|++++|+++|+++++||.+++|+..+.... ...+..+....|+. .
T Consensus 1 ~~~v~Ivg~g~tpfgr~----~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~ 75 (389)
T PRK07516 1 MMTASIVGWAHTPFGKL----DAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-F 75 (389)
T ss_pred CCcEEEEeCCcceeeec----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-C
Confidence 56899999999999986 57899999999999999999999999999999988654321 11222334456775 7
Q ss_pred CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+|+++|+++|+||+.|++.|+++|++|.+++++++|.|+||..
T Consensus 76 ~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~ 118 (389)
T PRK07516 76 KPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTAT 118 (389)
T ss_pred CceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccC
Confidence 9999999999999999999999999999999999999999853
No 45
>PRK06059 lipid-transfer protein; Provisional
Probab=99.85 E-value=1.1e-20 Score=163.74 Aligned_cols=113 Identities=16% Similarity=0.123 Sum_probs=102.0
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCCCc
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNEVP 116 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~vP 116 (160)
++|+|+|++||||+|+ +.+..+|+.+|++++|+++|+++++||.+++++..+... .+..++.++..+|++ ++|
T Consensus 4 ~~v~Ivg~~~t~~~r~-----~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~ 77 (399)
T PRK06059 4 EPVYILGAGMHPWGKW-----GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAP 77 (399)
T ss_pred CcEEEEEecccccCCC-----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCc
Confidence 5799999999999984 457799999999999999999999999999998876543 334578899999996 799
Q ss_pred eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
+++++++|+||+.|+..|+++|++|..++++++|.|+||.
T Consensus 78 ~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 78 VSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPK 117 (399)
T ss_pred eecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCC
Confidence 9999999999999999999999999999999999999985
No 46
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.84 E-value=1.3e-20 Score=162.60 Aligned_cols=116 Identities=19% Similarity=0.180 Sum_probs=105.4
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC--CCChHHHHHHHcCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ--GQNPARQASIKANIPNE 114 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~--g~~~ar~~al~~GLp~~ 114 (160)
|++|+|+|++||||+++ ++.++.+|+.+|++++|+++|+++++||.+++|+..+... .+++++.++..+|++ .
T Consensus 1 m~~v~IvG~~~tp~~~~----~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~ 75 (389)
T PRK06064 1 MRDVAIIGVGQTKFGEL----WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-P 75 (389)
T ss_pred CCcEEEEEcccccceec----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-C
Confidence 46899999999999986 5789999999999999999999999999999998765442 356888999999997 7
Q ss_pred CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
.|.++++++|+||+.|+..|+++|++|.+++++++|.|+||..
T Consensus 76 ~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~ 118 (389)
T PRK06064 76 IPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDV 118 (389)
T ss_pred CCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccC
Confidence 9999999999999999999999999999999999999999853
No 47
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.83 E-value=3.8e-20 Score=160.78 Aligned_cols=118 Identities=16% Similarity=0.092 Sum_probs=98.0
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-C-CChH-HHHHHHcCCCCC
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-G-QNPA-RQASIKANIPNE 114 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g-~~~a-r~~al~~GLp~~ 114 (160)
++|+|+|++||||+|+ +..++.++.||+.+|++++|+++|++|++||.+++|+..++.. . ...+ .......++. +
T Consensus 3 ~~v~Ivg~~~t~~~r~-~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~~-g 80 (403)
T PRK06289 3 DDVWVLGGYQSDFARN-WTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALW-G 80 (403)
T ss_pred CcEEEEeCCcCccccc-cCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcCC-C
Confidence 4799999999999974 5667899999999999999999999999999999998765421 1 1111 1122334663 6
Q ss_pred CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+|+++++++|+||++|++.|+.+|++|.+++++++|+|+||..
T Consensus 81 ~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~ 123 (403)
T PRK06289 81 VPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTV 123 (403)
T ss_pred CceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCC
Confidence 8999999999999999999999999999999999999999853
No 48
>KOG1392|consensus
Probab=99.80 E-value=2.6e-20 Score=156.28 Aligned_cols=133 Identities=23% Similarity=0.271 Sum_probs=122.2
Q ss_pred hccccccccccc-CCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChH
Q psy4156 24 FVTGFTRSTMVL-SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPA 102 (160)
Q Consensus 24 ~~~~~~~~~~~~-~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~a 102 (160)
|+|--.++..++ +|++++++++.||||--.+..++++-|.||+.++...+|++..++.|.+|.+|+|++.+.....|++
T Consensus 27 ~~ta~a~~~~k~kn~~nivlvdgvrtpfl~sgt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsnia 106 (465)
T KOG1392|consen 27 FGTARAASAVKKKNMPNIVLVDGVRTPFLVSGTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIA 106 (465)
T ss_pred hhhhhccccccccCCCceEEEecccCceeecccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHH
Confidence 455555555544 6889999999999998888889999999999999999999999999999999999999876678999
Q ss_pred HHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 103 RQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 103 r~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
|++++.+|+++.+|+.+|..+|.|+.+|+..+...|++|.+|++++||+|-||-
T Consensus 107 reaal~agfsdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsd 160 (465)
T KOG1392|consen 107 REAALLAGFSDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSD 160 (465)
T ss_pred HHHHHhcCCCCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeeccc
Confidence 999999999999999999999999999999999999999999999999999984
No 49
>PRK08256 lipid-transfer protein; Provisional
Probab=99.79 E-value=9.8e-19 Score=151.32 Aligned_cols=112 Identities=14% Similarity=0.177 Sum_probs=97.9
Q ss_pred ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156 39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS 118 (160)
Q Consensus 39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~ 118 (160)
+|+|+|++||||+++ + ++.++.+|+.+|++++|+++|+++++||.+++|+..+... ........+|+. ++|++
T Consensus 2 ~v~IvG~~~t~~~~~-~--~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~---~~~~~~~~lGl~-~~~~~ 74 (391)
T PRK08256 2 KVFVAGVGMTPFEKP-G--ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST---SGQRALYEVGMT-GIPIV 74 (391)
T ss_pred cEEEEeccccccccC-C--CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc---hhHHHHHHcCCC-CCCCc
Confidence 599999999999964 2 4678999999999999999999999999999998876431 122455678995 78999
Q ss_pred EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+++++|+||++|+..|+++|++|..++++++|+|+||..
T Consensus 75 ~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~ 113 (391)
T PRK08256 75 NVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPG 113 (391)
T ss_pred ccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccc
Confidence 999999999999999999999999999999999999853
No 50
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.78 E-value=1.2e-18 Score=148.94 Aligned_cols=110 Identities=18% Similarity=0.162 Sum_probs=100.9
Q ss_pred EeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc
Q psy4156 43 VSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM 122 (160)
Q Consensus 43 vg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~ 122 (160)
+|.+.|||+++. +.++.||+.+|++++|+++|++|++||.+++|+..+....+++++.++..+|++ .+|++++++
T Consensus 1 vG~g~t~~~~~~----~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~ 75 (375)
T cd00829 1 VGVGMTPFGRRS----DRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVEA 75 (375)
T ss_pred CeeeecCcccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEeC
Confidence 477899999873 789999999999999999999999999999999876544467899999999997 899999999
Q ss_pred cCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 123 LCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 123 aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+|+|++.++..|++.|++|..++++++|.|+|+..
T Consensus 76 ~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~ 110 (375)
T cd00829 76 AGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDV 110 (375)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccC
Confidence 99999999999999999999999999999999864
No 51
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.77 E-value=3.9e-18 Score=147.74 Aligned_cols=114 Identities=13% Similarity=0.072 Sum_probs=99.8
Q ss_pred CCceEEEeeeeccc-cccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CC-CChHHHHHHHcCCCC
Q psy4156 37 DNDVVIVSAARTPI-GSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QG-QNPARQASIKANIPN 113 (160)
Q Consensus 37 m~~V~Ivg~~rTpf-g~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g-~~~ar~~al~~GLp~ 113 (160)
|++|+|+|++.||| +++ .+.++.||+.+|++++|+++||+++|||.+++++ .++. .+ .+++..++..+|+.
T Consensus 2 ~~~v~IvG~g~t~~~~~~----~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~- 75 (386)
T PRK08313 2 KRLAAVLGTGQTKYVAKR----QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGAT- 75 (386)
T ss_pred CCcEEEEEeecCCcCccC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCC-
Confidence 46899999999999 665 4778999999999999999999999999999987 3332 12 24556788889996
Q ss_pred CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
..|+++++.+|+||..+++.|+++|++|.++.+++.|.|+|+.
T Consensus 76 ~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~ 118 (386)
T PRK08313 76 GKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSE 118 (386)
T ss_pred CCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccC
Confidence 7899999999999999999999999999999999999999975
No 52
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=99.77 E-value=2.4e-18 Score=146.46 Aligned_cols=118 Identities=15% Similarity=0.099 Sum_probs=109.7
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP 116 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP 116 (160)
.++.||. .||++.+|+.+..++...+|+.+|++++|+++|++|+|||.+|+++.+|+...|..|..++..+|+. .++
T Consensus 29 tsdewI~--~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~ 105 (323)
T COG0332 29 TSDEWIE--TRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAP 105 (323)
T ss_pred CCcceee--eecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccc
Confidence 4689999 5999998888878999999999999999999999999999999999999877788999999999997 699
Q ss_pred eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+|+++.+|+++++|+..|..+|++|.++-++|.|.|++|+-
T Consensus 106 afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ 146 (323)
T COG0332 106 AFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRI 146 (323)
T ss_pred eeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhcc
Confidence 99999999999999999999999998888888899998763
No 53
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.76 E-value=8.4e-18 Score=146.23 Aligned_cols=113 Identities=15% Similarity=0.058 Sum_probs=99.9
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-C-CCChHHHHHHHcCCCCCC
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-Q-GQNPARQASIKANIPNEV 115 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~-g~~~ar~~al~~GLp~~v 115 (160)
++|+|+|.+.|||+++ .+.+..+|+.+|++++|+++|++++|||.+++++. ++. . .+..+..++..+|+. ..
T Consensus 9 ~~vaIvG~g~t~~~~~----~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~-~~~~~~~~~~a~~l~~~lG~~-~~ 82 (392)
T PRK06065 9 KRVAVIGAGLTLFRRR----LLETPQELAWEAASKALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLSHGSGGI-RK 82 (392)
T ss_pred CceEEEEecccCCcCC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-CCcccccccHHHHHHHHcCCC-CC
Confidence 4799999999999987 46789999999999999999999999999999863 322 2 234777788889985 69
Q ss_pred ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
|+++|+.+|+||..++..|+++|++|..+++++.|.|||+.
T Consensus 83 ~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~ 123 (392)
T PRK06065 83 PVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSP 123 (392)
T ss_pred CeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccc
Confidence 99999999999999999999999999999999999999863
No 54
>PRK06158 thiolase; Provisional
Probab=99.73 E-value=2.2e-17 Score=142.86 Aligned_cols=110 Identities=14% Similarity=-0.045 Sum_probs=95.5
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA 117 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa 117 (160)
++|+|+|.+.|||+++ .+.++.||+.+|++++|+++||+++|||.+++++... ...+..++..+|++ ..|.
T Consensus 8 ~~vaIvG~g~t~~~~~----~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~----~~~~~~la~~lGl~-~~~~ 78 (384)
T PRK06158 8 GRTAIVGAATAGLGEA----PGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDD----ALWGLSVAEYLGIR-PRFV 78 (384)
T ss_pred CCEEEEEeeeccceeC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC----CCcHHHHHHHcCCC-Ceee
Confidence 5799999999999886 4788999999999999999999999999999987432 12334577788996 6899
Q ss_pred EEEcccCccHHHHHHHHHHHHHcCCCcEEEE-Eeeccccc
Q psy4156 118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGN-GAQYHITA 156 (160)
Q Consensus 118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vliv-gG~E~mt~ 156 (160)
++++.+|+|+..+++.|+++|++|.+++++| +|.|+|+.
T Consensus 79 ~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~ 118 (384)
T PRK06158 79 DGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSA 118 (384)
T ss_pred ccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccC
Confidence 9999999999999999999999998888886 59998874
No 55
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=99.73 E-value=3.3e-17 Score=138.01 Aligned_cols=115 Identities=17% Similarity=0.062 Sum_probs=101.5
Q ss_pred ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156 39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS 118 (160)
Q Consensus 39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~ 118 (160)
+.+|. .||++.+++...+++++.||+.+|++++|+++|++|++||.+++|+..+.... ..+..++..+|+. ++|++
T Consensus 30 ~~~i~--~~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~-~~~~~v~~~Lg~~-~~~~~ 105 (326)
T CHL00203 30 DHWIS--TRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLF-GSASQLQAEIGAT-RAVAF 105 (326)
T ss_pred hhhEe--eccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCC-chHHHHHHHhCCC-CCcee
Confidence 45676 79999998888899999999999999999999999999999999987765322 2345677778996 79999
Q ss_pred EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+++++|+||++|++.|+++|++|.++.+++.|.|+||..
T Consensus 106 ~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~ 144 (326)
T CHL00203 106 DITAACSGFILALVTATQFIQNGSYKNILVVGADTLSKW 144 (326)
T ss_pred eecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCc
Confidence 999999999999999999999999999999999999864
No 56
>KOG1406|consensus
Probab=99.70 E-value=4.4e-17 Score=135.55 Aligned_cols=120 Identities=15% Similarity=0.192 Sum_probs=103.9
Q ss_pred ccCCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCC
Q psy4156 34 VLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPN 113 (160)
Q Consensus 34 ~~~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~ 113 (160)
+++..+|||+|.++|+|.+. |...+.+.+|++.+|+..+|++++++.++||...+|.++++. ..++.+--..|+.
T Consensus 2 s~t~~rvyvvgvgmtkf~kp-g~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt- 76 (408)
T KOG1406|consen 2 TKTKPRVYVVGVGMTKFEKP-GRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT- 76 (408)
T ss_pred CCCCceEEEEecceeeecCC-CcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-
Confidence 33445799999999999875 556788999999999999999999999999999999998754 2222333357996
Q ss_pred CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCC
Q psy4156 114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA 158 (160)
Q Consensus 114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~ 158 (160)
++|.++||++|++|.+|+.+|-+.|++|..|+++.-|+|||.++.
T Consensus 77 gipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gs 121 (408)
T KOG1406|consen 77 GIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGS 121 (408)
T ss_pred CcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcc
Confidence 999999999999999999999999999999999999999998863
No 57
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.70 E-value=1.2e-16 Score=133.40 Aligned_cols=114 Identities=15% Similarity=0.075 Sum_probs=102.3
Q ss_pred eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEE
Q psy4156 40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASL 119 (160)
Q Consensus 40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~ 119 (160)
.+|. .||+|.+++.++++.++.+|+.+|++++|+++|+++++||.+++|+..++...+..+..++..+|++ .+|+++
T Consensus 32 ~~i~--~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~ 108 (319)
T PRK09352 32 EWIV--TRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFD 108 (319)
T ss_pred HHhh--hhcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEee
Confidence 4455 4899988888888999999999999999999999999999999998876544556777888999995 799999
Q ss_pred EcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
++++|+||+.|+..|++.|++|..+.++++|.|+|+.
T Consensus 109 v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~ 145 (319)
T PRK09352 109 LSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSR 145 (319)
T ss_pred ccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhcc
Confidence 9999999999999999999999999999999999875
No 58
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=99.67 E-value=3.9e-16 Score=130.38 Aligned_cols=113 Identities=14% Similarity=0.101 Sum_probs=101.3
Q ss_pred eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEE
Q psy4156 40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASL 119 (160)
Q Consensus 40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~ 119 (160)
.+|. .|+++.+++....++++.+|+.+|++++|+++|++|++||.+++++..++...+..+..++..+|++ .+|+++
T Consensus 31 ~~i~--~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~ 107 (318)
T TIGR00747 31 EWIV--TRTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFD 107 (318)
T ss_pred HHee--cccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEee
Confidence 4455 3788888777888999999999999999999999999999999998877654566778899999997 699999
Q ss_pred EcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156 120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT 155 (160)
Q Consensus 120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt 155 (160)
++++|+|+..|++.|+.+|++|..+.+++.+.|+++
T Consensus 108 v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~ 143 (318)
T TIGR00747 108 LSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLS 143 (318)
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhc
Confidence 999999999999999999999999999999999987
No 59
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.67 E-value=4.3e-16 Score=131.27 Aligned_cols=110 Identities=14% Similarity=-0.008 Sum_probs=97.3
Q ss_pred eccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCcc
Q psy4156 47 RTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGS 126 (160)
Q Consensus 47 rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaS 126 (160)
+|++.+++-...+.++.+|+.+|++++|+++|+++++||.+++++..++...+..+..++..+|++..+|+++|+++|+|
T Consensus 46 ~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~~ 125 (338)
T PRK09258 46 LTGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSNACLG 125 (338)
T ss_pred hcCceeEecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhhhhHH
Confidence 45665554444688999999999999999999999999999999987766567788999999999867999999999999
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 127 GLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 127 Gl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
+++|++.|.++|++|.++.+++.+.|+++.
T Consensus 126 ~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~ 155 (338)
T PRK09258 126 FLNGMLDAANMIELGQIDYALVVSGESARE 155 (338)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEecccch
Confidence 999999999999999999999999998765
No 60
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=99.66 E-value=1.2e-15 Score=132.71 Aligned_cols=113 Identities=17% Similarity=0.085 Sum_probs=92.0
Q ss_pred CCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcC-CCc-cccCceEEEeeecCCCCCC-hHHHHHHHcCCC
Q psy4156 36 SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRAN-VLP-NEISEVILGQALTAGQGQN-PARQASIKANIP 112 (160)
Q Consensus 36 ~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~ag-I~~-~~ID~vi~G~~~~~~~g~~-~ar~~al~~GLp 112 (160)
.|++|+|+|.+.|||++++ .+.+..||+.+|++++|+++| |++ +|||.+++++. ....+.. ....++..+|+.
T Consensus 2 ~~~~vaIvG~g~t~~~~~~---~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~-~~~~~~~~~~~~~~~~lg~~ 77 (385)
T PRK06066 2 FLNRVAIVGIGWYGFRPTT---PEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE-DFWEGIAIADEFAPDQIGGA 77 (385)
T ss_pred CCCcEEEEEeeecCCcCCC---CCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC-cccCcccccchhHHHHcccC
Confidence 4789999999999999642 367899999999999999999 997 79999988642 1111111 223455677884
Q ss_pred CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
..|.+++ |+||..+++.|+..|++|.+|++++.|.|||+.
T Consensus 78 -~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~ 117 (385)
T PRK06066 78 -MRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSD 117 (385)
T ss_pred -CCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccC
Confidence 5788887 999999999999999999999999999999975
No 61
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.64 E-value=1.3e-15 Score=132.50 Aligned_cols=110 Identities=11% Similarity=-0.038 Sum_probs=93.7
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA 117 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa 117 (160)
.+|+|+|.+.|||+++ .+.++.||+.+|++++|+++||+++|||.++.++ ..... ....++..+|++ ..|.
T Consensus 5 ~~vaIvG~g~t~~~~~----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~---~~~~~-~~~~~~~~lGl~-~~~~ 75 (388)
T PRK08142 5 GKAYIVGAYEHPTRKA----PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAG---DAPGL-GPASMVDYLGLK-LRHV 75 (388)
T ss_pred CCEEEEEEeeccceeC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC---CCCCc-cHHHHHHhCCCC-Ceee
Confidence 4799999999999987 4678899999999999999999999999976421 11111 123477788995 7899
Q ss_pred EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
.+++.+|+|+..++..|+..|++|.++++++.|.|||+.
T Consensus 76 ~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~ 114 (388)
T PRK08142 76 DSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRS 114 (388)
T ss_pred ccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeeccc
Confidence 999999999999999999999999999999999999863
No 62
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=99.64 E-value=1.7e-15 Score=130.68 Aligned_cols=114 Identities=17% Similarity=0.035 Sum_probs=100.6
Q ss_pred ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156 39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS 118 (160)
Q Consensus 39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~ 118 (160)
+.+|. .+|++.+++...+++++.+|+.+|++++|++++++|+|||.+++++..+.... ..+..++..+|++ +.|++
T Consensus 75 ~~~i~--~~tGi~~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~-~~a~~v~~~LG~~-~~~~~ 150 (379)
T PLN02326 75 DEWIA--TRTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLF-GSAPQVQAALGCT-NALAF 150 (379)
T ss_pred hhhee--cccCcceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccC-cHHHHHHHHhCCC-CCcee
Confidence 45564 68999988888889999999999999999999999999999999987654322 3566788889997 89999
Q ss_pred EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
+++.+|+|++.|++.|+++|++|.++.++++|.|.||.
T Consensus 151 dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~ 188 (379)
T PLN02326 151 DLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSR 188 (379)
T ss_pred eccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcC
Confidence 99999999999999999999999999999999999875
No 63
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=99.64 E-value=1.8e-15 Score=125.94 Aligned_cols=109 Identities=16% Similarity=0.119 Sum_probs=95.4
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccH
Q psy4156 48 TPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSG 127 (160)
Q Consensus 48 Tpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSG 127 (160)
+.+.+++-..++.++.+|+.+|++++|+++|++|++||.+++++..+....+..+..++..+|++ .+|+++++++|+|+
T Consensus 34 ~gi~~r~~~~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~~~C~s~ 112 (324)
T cd00827 34 TGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLKQACYGG 112 (324)
T ss_pred eecceeEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehhhhhHHH
Confidence 33333333335789999999999999999999999999999999877655667888999999998 89999999999999
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 128 LKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 128 l~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
+.|+..|+++|++|..+.+++.+.|+|+..
T Consensus 113 ~~al~~A~~~i~~g~~~~vlvv~~e~~~~~ 142 (324)
T cd00827 113 TAALQLAANLVESGPWRYALVVASDIASYL 142 (324)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEEHHhhhc
Confidence 999999999999999999999999999854
No 64
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.63 E-value=2.2e-15 Score=126.08 Aligned_cols=109 Identities=18% Similarity=0.090 Sum_probs=96.8
Q ss_pred eccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCcc
Q psy4156 47 RTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGS 126 (160)
Q Consensus 47 rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaS 126 (160)
++.+.+++-..+++++.+|+.+|++++|+++|++|++||.+++++..++...+..+..++..+|++ ..++++++++|+|
T Consensus 38 ~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~~~C~~ 116 (325)
T PRK12879 38 RTGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDINAACAG 116 (325)
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEECccchH
Confidence 566666666667889999999999999999999999999999998876655677888899999997 6899999999999
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 127 GLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 127 Gl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
+..|+..|.++|++|..+.+++.+.|+|+.
T Consensus 117 ~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~ 146 (325)
T PRK12879 117 FLYGLETANGLITSGLYKKVLVIGAERLSK 146 (325)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEehhhcC
Confidence 999999999999999999999999999875
No 65
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.63 E-value=2.5e-15 Score=124.98 Aligned_cols=110 Identities=15% Similarity=0.026 Sum_probs=98.4
Q ss_pred eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCc
Q psy4156 46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCG 125 (160)
Q Consensus 46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCa 125 (160)
.++.+.+++-+.+++++.+|+.+|++++|+++|++|++||.+++++..++...+..+..++..+|++ ..|+++++++|+
T Consensus 34 ~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~~~C~ 112 (320)
T cd00830 34 TRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDINAACS 112 (320)
T ss_pred hccCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeeccccch
Confidence 3566666666667899999999999999999999999999999998876654567888899999997 799999999999
Q ss_pred cHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 126 SGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 126 SGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
|+..|+..|+++|++|..+.+++.+.|+|+.
T Consensus 113 s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~ 143 (320)
T cd00830 113 GFLYGLSTAAGLIRSGGAKNVLVVGAETLSR 143 (320)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEehhhcc
Confidence 9999999999999999999999999999875
No 66
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.63 E-value=1.5e-15 Score=130.90 Aligned_cols=109 Identities=12% Similarity=0.065 Sum_probs=90.9
Q ss_pred eccccccCccCC-----CCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc
Q psy4156 47 RTPIGSFLGSLS-----ELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN 121 (160)
Q Consensus 47 rTpfg~~~g~~~-----~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~ 121 (160)
+|.+.+|+...+ +.++.||+.+|++++|+++|++|++||.+++++..++...|..+..++..+|++ .+|+++++
T Consensus 43 ~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~ 121 (378)
T PRK06816 43 NNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA 121 (378)
T ss_pred hCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec
Confidence 566655543332 257899999999999999999999999999999876543343445667778987 68999999
Q ss_pred ccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 122 MLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 122 ~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
++|+|+++|++.|+++|++|.++.+++.|.|+||+
T Consensus 122 ~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~ 156 (378)
T PRK06816 122 GVCAAGMMALKYAYLSVKAGESRNAVATASELASR 156 (378)
T ss_pred CcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchh
Confidence 99999999999999999999999999999999975
No 67
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=99.62 E-value=2.8e-15 Score=127.93 Aligned_cols=116 Identities=14% Similarity=0.115 Sum_probs=100.8
Q ss_pred eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEE
Q psy4156 40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASL 119 (160)
Q Consensus 40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~ 119 (160)
-+|. .+|.+.+++..-+++++.+|+.+|++++|+++|++|++||.+++++..+....+..+..++..+|++...|+++
T Consensus 30 ~~i~--~~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~d 107 (345)
T TIGR00748 30 ESIS--NGLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAAD 107 (345)
T ss_pred hHee--eccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEE
Confidence 4454 47777777766678999999999999999999999999999999887766555666778888999965789999
Q ss_pred EcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156 120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~ 157 (160)
++.+|+|+..|+..|+.+|++|..+.+++.+.|+|+.+
T Consensus 108 v~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~~ 145 (345)
T TIGR00748 108 LEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQGA 145 (345)
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeecccC
Confidence 99999999999999999999999999999999999754
No 68
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.60 E-value=4.3e-15 Score=127.41 Aligned_cols=109 Identities=12% Similarity=-0.028 Sum_probs=96.6
Q ss_pred eccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCcc
Q psy4156 47 RTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGS 126 (160)
Q Consensus 47 rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaS 126 (160)
+|.+.+|+...+++++.+|+.+|++.+|+++|++|++||.+++++..++...|..+..++..+|++..+++++++.+|++
T Consensus 45 ~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~~C~g 124 (353)
T PRK12880 45 VIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAG 124 (353)
T ss_pred ccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhhhhHH
Confidence 36666666666788999999999999999999999999999999999887778899999999999767999999999999
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 127 GLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 127 Gl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
+++|++.|.++|++|..+ +++.+.|.+|+
T Consensus 125 ~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~ 153 (353)
T PRK12880 125 YLYGLFVAHSLIQSGLGK-ILLICGDTLSK 153 (353)
T ss_pred HHHHHHHHHHHHHcCCCC-EEEEEehhhhc
Confidence 999999999999999888 55555787664
No 69
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.60 E-value=5.6e-15 Score=124.09 Aligned_cols=109 Identities=16% Similarity=0.038 Sum_probs=93.8
Q ss_pred eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCc
Q psy4156 46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCG 125 (160)
Q Consensus 46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCa 125 (160)
.+|.+.+++...+++++.+|+.+|++++|+++|++|++||.+++++..++...|..+..++..+|++ +.++++++++|+
T Consensus 36 ~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~~C~ 114 (326)
T PRK05963 36 RRTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAGACA 114 (326)
T ss_pred hccCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccchhh
Confidence 5677776666667899999999999999999999999999999999887655677888899999997 689999999999
Q ss_pred cHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 126 SGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 126 SGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
|+++|++.|.++++++..+++|+ +.|+++.
T Consensus 115 g~~~aL~~A~~~l~~~~~~aLVv-~~d~~s~ 144 (326)
T PRK05963 115 GFLYALVLADGFVRAQGKPVLVV-AANILSR 144 (326)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEE-Eechhhc
Confidence 99999999999999987555554 5587663
No 70
>PRK07855 lipid-transfer protein; Provisional
Probab=99.60 E-value=1.1e-14 Score=126.27 Aligned_cols=105 Identities=14% Similarity=0.051 Sum_probs=89.9
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA 117 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa 117 (160)
.+|+|+|.+.|||+++ .+.++.||+.+|++++|+++||+++|||.+++++.. . .....++..+|++...|.
T Consensus 4 ~~v~IvG~g~t~~~r~----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~---~~~~~l~~~lGl~~~~~~ 74 (386)
T PRK07855 4 GKAAIVGIGATEFSKN----SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--T---NPEIAVARALGIGELKFF 74 (386)
T ss_pred CCEEEEEeeecccccC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--c---ccHHHHHHHCCCCCCcce
Confidence 5799999999999987 467899999999999999999999999999864321 1 122457778899622677
Q ss_pred EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEee
Q psy4156 118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQ 151 (160)
Q Consensus 118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~ 151 (160)
.+|+.+|+|+..++..|+..|++|.+|++++.|.
T Consensus 75 ~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~ 108 (386)
T PRK07855 75 SRIHYGGGAACATVQQAAMAVATGVADVVVCYRA 108 (386)
T ss_pred eeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEee
Confidence 8999999999999999999999999999999988
No 71
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.58 E-value=1.4e-14 Score=121.75 Aligned_cols=110 Identities=11% Similarity=0.009 Sum_probs=94.8
Q ss_pred eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCC-CCceEEEcccC
Q psy4156 46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPN-EVPASLVNMLC 124 (160)
Q Consensus 46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~-~vPa~~V~~aC 124 (160)
.+|.+.+++... ++++.+|+.+|++++|+++|++|++||.+++++..++...|..+..++..+|++. .+|+++++.+|
T Consensus 37 ~~~Gi~~R~~~~-~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C 115 (329)
T PRK07204 37 KKSGVKTRHFVD-GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTC 115 (329)
T ss_pred hccCceEEeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccchh
Confidence 356666555444 7899999999999999999999999999999987765445677888889999974 37999999999
Q ss_pred ccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 125 GSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 125 aSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
+|++.|+..|.++|++|..+.+++.+.|+++.
T Consensus 116 ~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~ 147 (329)
T PRK07204 116 LSFITALDTISYAIECGRYKRVLIISSEISSV 147 (329)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEeccccC
Confidence 99999999999999999999999999999875
No 72
>PRK07937 lipid-transfer protein; Provisional
Probab=99.57 E-value=2.8e-14 Score=122.67 Aligned_cols=113 Identities=12% Similarity=-0.024 Sum_probs=86.4
Q ss_pred CCceEEEeeeeccccccCccCCCCCH-HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCC-hHHHHHHHcCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKA-HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQN-PARQASIKANIPNE 114 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~-~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~-~ar~~al~~GLp~~ 114 (160)
|++|+|+|.+.|||+++. .+.+. .||+.+|++++|+++||+++|||.++.++. ....+.. .........|+...
T Consensus 1 M~~vaIvG~g~t~~~~~~---~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~ 76 (352)
T PRK07937 1 MRDVAVVGFAQAPHVRRT---DGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPP 76 (352)
T ss_pred CCcEEEEEeeccccccCC---CCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCC
Confidence 468999999999999863 13444 899999999999999999999998754322 1112211 11223455677335
Q ss_pred CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
.|...+++ +|..|+..|+..|+||..|++++.|.|||+.
T Consensus 77 ~~~~~v~~---~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~ 115 (352)
T PRK07937 77 INESHVEM---DAAWALYEAWVKLLTGEVDTALVYGFGKSSA 115 (352)
T ss_pred CceEEecC---cHHHHHHHHHHHHhcCCCCEEEEEEecccCc
Confidence 77777774 7899999999999999999999999999974
No 73
>PRK04262 hypothetical protein; Provisional
Probab=99.57 E-value=1.5e-14 Score=123.14 Aligned_cols=108 Identities=13% Similarity=0.088 Sum_probs=94.6
Q ss_pred eccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCcc
Q psy4156 47 RTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGS 126 (160)
Q Consensus 47 rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaS 126 (160)
+|.+.+++.+..+.++.+|+.+|++++|+++|++|++||.+++++..+....+..+..++..+|++..+|+++++.+|+|
T Consensus 36 ~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~ 115 (347)
T PRK04262 36 GLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLEFACKA 115 (347)
T ss_pred ccCeeeeecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHHHhHHH
Confidence 56666677777889999999999999999999999999999998877665556667788888999756899999999999
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156 127 GLKSVTLTSRQQVLLTLHWLGNGAQYHI 154 (160)
Q Consensus 127 Gl~Al~~Aa~~I~sG~~~vlivgG~E~m 154 (160)
++.|++.|..+|++|..+.+++.+.|+.
T Consensus 116 ~~~aL~~A~~~i~sg~~~~aLVv~~e~~ 143 (347)
T PRK04262 116 GTAALQAAMGLVKSGMIKYALAIGADTA 143 (347)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEeee
Confidence 9999999999999998888888888874
No 74
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=99.55 E-value=7.3e-14 Score=124.97 Aligned_cols=117 Identities=12% Similarity=-0.022 Sum_probs=97.3
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCC--ccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVL--PNEISEVILGQALTAGQGQNPARQASIKANIPNE 114 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~--~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~ 114 (160)
.+.++|+|.+.|+|+++... ...++.||+.+|++++|+++|++ +++||.+++++.... ...+.++.++..+|+. .
T Consensus 3 ~~~~~IVGvG~t~~~~~~~~-~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~-~~~~~~~~la~~lGl~-p 79 (498)
T PRK08257 3 PRTPVIVGVGQVTERPDDPA-YGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSW-RYRDPPGLLAERLGAD-P 79 (498)
T ss_pred CCcEEEEEeeecccccCCcc-cCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccc-cccCHHHHHHHHcCCC-C
Confidence 35799999999999875311 11378999999999999999999 999999999876432 2334667888899995 6
Q ss_pred CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
.+......+|+|+..+++.|+..|++|..++++++|.|+|+.
T Consensus 80 ~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~ 121 (498)
T PRK08257 80 ARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQST 121 (498)
T ss_pred cceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccc
Confidence 777777778888899999999999999999999999999964
No 75
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.53 E-value=6.8e-14 Score=112.30 Aligned_cols=93 Identities=25% Similarity=0.293 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHH
Q psy4156 60 LKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 60 ~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~ 139 (160)
.++.+|+.+|++++|+++|+++++||.+++|+..++...+..+..++...|++ ..|+++++.+|+|++.|++.|.+.|+
T Consensus 5 ~~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i~ 83 (254)
T cd00327 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQVQ 83 (254)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHHH
Confidence 44889999999999999999999999999999887654567888899999997 79999999999999999999999999
Q ss_pred cCCCcEEEEEeecc
Q psy4156 140 LLTLHWLGNGAQYH 153 (160)
Q Consensus 140 sG~~~vlivgG~E~ 153 (160)
+|..+.++++|.|+
T Consensus 84 ~g~~~~~lv~~~e~ 97 (254)
T cd00327 84 NGKADIVLAGGSEE 97 (254)
T ss_pred CCCCCEEEEEecce
Confidence 99999999999987
No 76
>PRK06840 hypothetical protein; Validated
Probab=99.52 E-value=6.1e-14 Score=118.52 Aligned_cols=110 Identities=16% Similarity=0.015 Sum_probs=92.4
Q ss_pred eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEee-ecCCCCCChHHHHHHHcCCCCCCceEEEcccC
Q psy4156 46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQA-LTAGQGQNPARQASIKANIPNEVPASLVNMLC 124 (160)
Q Consensus 46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~-~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aC 124 (160)
.+|.+.+++-+.+++++.+|+.+|++++|+++|++|++||.+++++. .++...+..+..++..+|++ ..|+++++++|
T Consensus 37 ~~~Gi~~r~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~~~C 115 (339)
T PRK06840 37 EKFGIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIMAVC 115 (339)
T ss_pred hhcCcceEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Ccccccccccc
Confidence 45677666666678999999999999999999999999999986543 34434556677888899997 78999999999
Q ss_pred ccHHHHHHHHHHHHHc-CCCcEEEEEeeccccc
Q psy4156 125 GSGLKSVTLTSRQQVL-LTLHWLGNGAQYHITA 156 (160)
Q Consensus 125 aSGl~Al~~Aa~~I~s-G~~~vlivgG~E~mt~ 156 (160)
+|++.|+..|+++|++ |..+.+++.+.|+++.
T Consensus 116 ~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~ 148 (339)
T PRK06840 116 ASFPIALKVAKDLLYSDPSIENVLLVGGYRNSD 148 (339)
T ss_pred hHHHHHHHHHHHHHhcCCCccEEEEEeeccccc
Confidence 9999999999999999 8888887788887754
No 77
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.49 E-value=1.5e-13 Score=117.98 Aligned_cols=94 Identities=15% Similarity=0.050 Sum_probs=82.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHc
Q psy4156 61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVL 140 (160)
Q Consensus 61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~s 140 (160)
+..+|+.+|++++|+++|++|++||.+++++..++...+..+..++..+|+. .|+++++.+|+||+.|+..|+++|++
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~~aCasg~~al~~A~~~i~~ 171 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMNVACSSATFGIQTAANAIRS 171 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEecchhHHHHHHHHHHHHHHHc
Confidence 3468999999999999999999999999998766544455566777888885 68999999999999999999999999
Q ss_pred CCCcEEEEEeeccccc
Q psy4156 141 LTLHWLGNGAQYHITA 156 (160)
Q Consensus 141 G~~~vlivgG~E~mt~ 156 (160)
|..+.++++|.|+|+.
T Consensus 172 g~~~~vLvv~~e~~s~ 187 (372)
T PRK07515 172 GSARRVLVVNPEICSG 187 (372)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999999984
No 78
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=99.46 E-value=2.1e-13 Score=116.33 Aligned_cols=95 Identities=13% Similarity=0.123 Sum_probs=85.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHHH
Q psy4156 61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I~ 139 (160)
++.+|+.+|++.+|+++|++|++||.+++++..+ ...|..+..++..+|++..+++++++ ++|+|++.|++.|..+++
T Consensus 84 ~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~ 162 (361)
T cd00831 84 EARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLE 162 (361)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHHH
Confidence 5899999999999999999999999999998764 34567888888999997569999999 899999999999999999
Q ss_pred cCCCcEEEEEeeccccc
Q psy4156 140 LLTLHWLGNGAQYHITA 156 (160)
Q Consensus 140 sG~~~vlivgG~E~mt~ 156 (160)
+|..+-+++.+.|++|.
T Consensus 163 ~~~~~~aLvv~~e~~s~ 179 (361)
T cd00831 163 ANPGARVLVVSTELCSL 179 (361)
T ss_pred HCCCCEEEEEEeecccc
Confidence 99878788888898876
No 79
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.45 E-value=3.4e-13 Score=112.34 Aligned_cols=102 Identities=20% Similarity=0.192 Sum_probs=88.7
Q ss_pred eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCC----ccccCceEEEeeecCCC------------------
Q psy4156 40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVL----PNEISEVILGQALTAGQ------------------ 97 (160)
Q Consensus 40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~----~~~ID~vi~G~~~~~~~------------------ 97 (160)
++|+|.+.+ ..+|+.+|++++|+++|++ +++||.+++|+..+...
T Consensus 2 ~~i~g~g~~-------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (332)
T cd00825 2 AVITGLGSY-------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVT 68 (332)
T ss_pred ceEEcccHH-------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhh
Confidence 567777666 7889999999999999999 99999999998865432
Q ss_pred ---CCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 98 ---GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 98 ---g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
.+..+..++...|+ ..|+++++.+|+|++.|++.|.+.|++|..+.++++|+|.++.
T Consensus 69 ~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~ 128 (332)
T cd00825 69 KAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAA 128 (332)
T ss_pred cccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccC
Confidence 33457788888999 4799999999999999999999999999999999999998764
No 80
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.44 E-value=8.1e-13 Score=112.45 Aligned_cols=90 Identities=16% Similarity=0.118 Sum_probs=78.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHH
Q psy4156 59 ELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 59 ~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I 138 (160)
+.+..+|+.+|++.||+++|++++|||.+++|+. +. .+..+..++..+|+ |.++++.+|+|+++|+..|+..|
T Consensus 47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~--Q~~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~lI 119 (327)
T TIGR02845 47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN--QIITANFVARDLGI----PFLGLYGACSTSMETLALGAMLV 119 (327)
T ss_pred chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC--cccHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999974 22 23467778777775 67999999999999999999999
Q ss_pred HcCCCcEEEEEeecccc
Q psy4156 139 VLLTLHWLGNGAQYHIT 155 (160)
Q Consensus 139 ~sG~~~vlivgG~E~mt 155 (160)
++|.++.+++.+.|+++
T Consensus 120 ~SG~ad~VLVV~Ssh~S 136 (327)
T TIGR02845 120 DGGFADRVLAATSSHYA 136 (327)
T ss_pred hCCCCCEEEEEEecccc
Confidence 99999999999988877
No 81
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.43 E-value=7.7e-13 Score=112.89 Aligned_cols=93 Identities=19% Similarity=0.154 Sum_probs=80.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHH
Q psy4156 58 SELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137 (160)
Q Consensus 58 ~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~ 137 (160)
++....+|+.+|++.||+++|++++|||.++.|+... .+..+..++..+|+ |+++|+.+|+|+++|+..|+..
T Consensus 52 wEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~---Q~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~l 124 (337)
T PRK08304 52 WEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN---QIISANFAARELGI----PFLGLYGACSTMMESLALGSML 124 (337)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC---CcchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHH
Confidence 3567789999999999999999999999999997531 22455666666664 8999999999999999999999
Q ss_pred HHcCCCcEEEEEeecccccC
Q psy4156 138 QVLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 138 I~sG~~~vlivgG~E~mt~~ 157 (160)
|++|.++.+++.+.|+++.+
T Consensus 125 I~SG~ad~VLVV~Ssh~s~a 144 (337)
T PRK08304 125 IDGGFADRVLAATSSHFATA 144 (337)
T ss_pred HhcCCCCEEEEEEcchhhhh
Confidence 99999999999999999875
No 82
>PLN03168 chalcone synthase; Provisional
Probab=99.38 E-value=2.4e-12 Score=112.05 Aligned_cols=96 Identities=8% Similarity=0.025 Sum_probs=85.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC-ceEEEcccCccHHHHHHHHHHHHH
Q psy4156 61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV-PASLVNMLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v-Pa~~V~~aCaSGl~Al~~Aa~~I~ 139 (160)
...+|+.+|+++||+++|++|+|||.+|+++.++. ..|..+..++..+|++..+ .+++++.+|++|++|+..|..+++
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~ 178 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGV-NMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAE 178 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC-CCccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999998874 4678888999999997544 489999999999999999999999
Q ss_pred cCCCcEEEEEeecccccC
Q psy4156 140 LLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 140 sG~~~vlivgG~E~mt~~ 157 (160)
+|.+.-+++.++|.+|+.
T Consensus 179 ~~~~~~VLVV~~E~~S~~ 196 (389)
T PLN03168 179 NNKGARVLAVASEVTAVT 196 (389)
T ss_pred hCCCCEEEEEEEehhhhh
Confidence 998888888889998864
No 83
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=99.38 E-value=2.4e-12 Score=114.30 Aligned_cols=108 Identities=10% Similarity=0.028 Sum_probs=88.9
Q ss_pred eccccccCc--cCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHH---HHcCCCCCCceEEEc
Q psy4156 47 RTPIGSFLG--SLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQAS---IKANIPNEVPASLVN 121 (160)
Q Consensus 47 rTpfg~~~g--~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~a---l~~GLp~~vPa~~V~ 121 (160)
+|.++.++- +..+++..+|+.+|++.+|+++|++|++||.+++|+.++....+..+..++ ..+|.+ .+++++++
T Consensus 36 ~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~ 114 (459)
T PLN02577 36 TIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST 114 (459)
T ss_pred hhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh
Confidence 466665443 236899999999999999999999999999999999988766667776554 456775 79999999
Q ss_pred ccCccHHHHHHHHHHHHHcCC--CcEEEEEeecccc
Q psy4156 122 MLCGSGLKSVTLTSRQQVLLT--LHWLGNGAQYHIT 155 (160)
Q Consensus 122 ~aCaSGl~Al~~Aa~~I~sG~--~~vlivgG~E~mt 155 (160)
.+|.++..|++.|.++|++|. .+-++|.|.|.++
T Consensus 115 ~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~ 150 (459)
T PLN02577 115 NACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAV 150 (459)
T ss_pred hhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhh
Confidence 999999999999999999996 3666666667655
No 84
>PLN03169 chalcone synthase family protein; Provisional
Probab=99.36 E-value=2.2e-12 Score=112.20 Aligned_cols=97 Identities=7% Similarity=0.010 Sum_probs=83.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC-ceEEEcccCccHHHHHHHHHHH
Q psy4156 59 ELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV-PASLVNMLCGSGLKSVTLTSRQ 137 (160)
Q Consensus 59 ~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v-Pa~~V~~aCaSGl~Al~~Aa~~ 137 (160)
++++.+|+.+|++++|+++|++|++||.+++++. ++...|..+..++..+|++..+ ++++++.+|+++++|+..|+.+
T Consensus 103 ~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~-t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~ 181 (391)
T PLN03169 103 NEAVTQMAVEASLACIKEWGRPVSDITHLVYVSS-SEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDI 181 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECc-CCCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHHH
Confidence 5667899999999999999999999999999886 4445677888999999997555 5899999999999999999999
Q ss_pred HHcCCCcEEEEEeeccccc
Q psy4156 138 QVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 138 I~sG~~~vlivgG~E~mt~ 156 (160)
+++|..+-+++.+.|.+|.
T Consensus 182 ~~~~~~~~vLvv~~e~~s~ 200 (391)
T PLN03169 182 AENNPGSRVLLTTSETTIL 200 (391)
T ss_pred HHhCCCCeEEEEEEEcChh
Confidence 9999666556667788764
No 85
>PLN03171 chalcone synthase-like protein; Provisional
Probab=99.36 E-value=3.6e-12 Score=111.21 Aligned_cols=96 Identities=11% Similarity=-0.052 Sum_probs=83.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC-ceEEEcccCccHHHHHHHHHHHH
Q psy4156 60 LKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV-PASLVNMLCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 60 ~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v-Pa~~V~~aCaSGl~Al~~Aa~~I 138 (160)
+++.+|+.+|++.+|+++|++|++||.+++++..+.. .|..+..++..+|++..+ +.+.+.++|+++++|+..|..+|
T Consensus 106 ~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li 184 (399)
T PLN03171 106 DAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLA 184 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999988764 577888999999997544 36778889999999999999999
Q ss_pred HcCCCcEEEEEeeccccc
Q psy4156 139 VLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 139 ~sG~~~vlivgG~E~mt~ 156 (160)
++|.++-+++.+.|.+|+
T Consensus 185 ~~~~~~~vLVv~~e~~s~ 202 (399)
T PLN03171 185 ENNRGARVLVVAAEITLL 202 (399)
T ss_pred HhCCCCeEEEEEEecccc
Confidence 999777777778888774
No 86
>PLN02932 3-ketoacyl-CoA synthase
Probab=99.35 E-value=5.2e-12 Score=112.66 Aligned_cols=95 Identities=9% Similarity=0.161 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHHHc
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQVL 140 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I~s 140 (160)
+++|+.+|++++|+++|++|+|||.+|+.|..+. ..|..+..++.+.|++.++++++++ .+|++|+.|+..|.+++++
T Consensus 148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~ 226 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQV 226 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHc
Confidence 7899999999999999999999999999998875 5678889999999997689999999 9999999999999999999
Q ss_pred CCCcEEEEEeecccccC
Q psy4156 141 LTLHWLGNGAQYHITAD 157 (160)
Q Consensus 141 G~~~vlivgG~E~mt~~ 157 (160)
+...-++|.+.|.+|+-
T Consensus 227 ~~~~~aLVVstE~~S~~ 243 (478)
T PLN02932 227 HRNTYALVVSTENITQN 243 (478)
T ss_pred CCCCeEEEEEEeecccc
Confidence 98888888899999864
No 87
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=99.35 E-value=8.5e-12 Score=107.96 Aligned_cols=110 Identities=12% Similarity=0.036 Sum_probs=91.6
Q ss_pred EEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEE
Q psy4156 41 VIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLV 120 (160)
Q Consensus 41 ~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V 120 (160)
++.+.+.+.+... ..+++..+|+.+|++.+|+++ +|++||.+++|+..+....+..+..++..+|++..++++++
T Consensus 31 ~~~g~G~~~~~~~---~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv 105 (379)
T TIGR01835 31 FHIGIGQKKMAVP---PIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFEL 105 (379)
T ss_pred HHhhcCceEEeeC---CCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEe
Confidence 3445455554432 357889999999999999998 89999999999988765556788899999999767999999
Q ss_pred cccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156 121 NMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT 155 (160)
Q Consensus 121 ~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt 155 (160)
+++|+||..|++.|.++|++|..+.++|.+.|...
T Consensus 106 ~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~ 140 (379)
T TIGR01835 106 KQACYGATAALQMAKGHVALSPDRKVLVIASDIAK 140 (379)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhh
Confidence 99999999999999999999977777777778754
No 88
>PLN02377 3-ketoacyl-CoA synthase
Probab=99.29 E-value=1.8e-11 Score=109.85 Aligned_cols=96 Identities=15% Similarity=0.172 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHHH
Q psy4156 61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I~ 139 (160)
.+++|+.+|++++|+++|++|+|||.+++ ++.+....|..+..++.+.|++.++++++++ .+|++|+.|+..|.++++
T Consensus 171 ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~ 249 (502)
T PLN02377 171 EAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQ 249 (502)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHH
Confidence 46789999999999999999999999987 5555445688899999999997789999999 799999999999999999
Q ss_pred cCCCcEEEEEeecccccC
Q psy4156 140 LLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 140 sG~~~vlivgG~E~mt~~ 157 (160)
++...-++|.+.|.+|..
T Consensus 250 ~~~~~~aLVVstE~~S~~ 267 (502)
T PLN02377 250 VHRNTYAVVVSTENITQN 267 (502)
T ss_pred cCCCCEEEEEEEeccccc
Confidence 998888888899998863
No 89
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.27 E-value=2.3e-11 Score=107.99 Aligned_cols=106 Identities=11% Similarity=0.009 Sum_probs=85.5
Q ss_pred eccccccC--ccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHH---cCCCCCCceEEEc
Q psy4156 47 RTPIGSFL--GSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIK---ANIPNEVPASLVN 121 (160)
Q Consensus 47 rTpfg~~~--g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~---~GLp~~vPa~~V~ 121 (160)
++.++.++ -...+++..+|+.+|++.+|++++++|++||.+++|+..+....+..+..++.. +|.+ .+.+++++
T Consensus 33 ~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~ 111 (454)
T TIGR01833 33 TIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTT 111 (454)
T ss_pred eechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEecc
Confidence 35555443 244689999999999999999999999999999999988876666677666653 4665 79999999
Q ss_pred ccCccHHHHHHHHHHHHHcCC--CcEEEEEeecc
Q psy4156 122 MLCGSGLKSVTLTSRQQVLLT--LHWLGNGAQYH 153 (160)
Q Consensus 122 ~aCaSGl~Al~~Aa~~I~sG~--~~vlivgG~E~ 153 (160)
++|.++..|+..|..+|++|. .+-+||.+.|.
T Consensus 112 ~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 112 NACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred ccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 999999999999999999995 34455555554
No 90
>PLN03170 chalcone synthase; Provisional
Probab=99.26 E-value=1.5e-11 Score=107.46 Aligned_cols=95 Identities=9% Similarity=0.009 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC-ceEEEcccCccHHHHHHHHHHHHH
Q psy4156 61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV-PASLVNMLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v-Pa~~V~~aCaSGl~Al~~Aa~~I~ 139 (160)
...+|+.+|+++||+++|++++|||.+++.+..+. ..|..+..++..+|++..+ .+++++.+|++++.|+..|..+++
T Consensus 105 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~ 183 (401)
T PLN03170 105 EVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGV-DMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAE 183 (401)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHH
Confidence 45679999999999999999999999998887653 4677888999999998555 489999999999999999999999
Q ss_pred cCCCcEEEEEeeccccc
Q psy4156 140 LLTLHWLGNGAQYHITA 156 (160)
Q Consensus 140 sG~~~vlivgG~E~mt~ 156 (160)
++..+-+++.++|.+|.
T Consensus 184 ~~~~~~vLVV~~E~~S~ 200 (401)
T PLN03170 184 NNRGARVLVVCSEITAV 200 (401)
T ss_pred cCCCCeEEEEEEehhhh
Confidence 99877788888898874
No 91
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.26 E-value=4.9e-11 Score=102.62 Aligned_cols=91 Identities=20% Similarity=0.148 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCC-------------------------CCCC-hHHHHHHHcCCC
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEISE----VILGQALTAG-------------------------QGQN-PARQASIKANIP 112 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~-------------------------~g~~-~ar~~al~~GLp 112 (160)
.+|+.++++++|+++|++++++|. +++|+..... ...+ ++..++...|+
T Consensus 72 ~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl- 150 (407)
T TIGR03150 72 IQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA- 150 (407)
T ss_pred HHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC-
Confidence 678999999999999999999998 5555432110 0011 33456677787
Q ss_pred CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156 113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT 155 (160)
Q Consensus 113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt 155 (160)
.-|.++++.+|+||+.|+..|++.|++|..+++|++|+|++.
T Consensus 151 -~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~ 192 (407)
T TIGR03150 151 -KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAI 192 (407)
T ss_pred -CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcC
Confidence 478999999999999999999999999999999999999853
No 92
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.25 E-value=2.1e-11 Score=103.79 Aligned_cols=88 Identities=15% Similarity=0.181 Sum_probs=73.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHH
Q psy4156 60 LKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 60 ~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~ 139 (160)
....+|+.+|++.||+++|++++|||.++.|+...+ ..++..++..+| +|.++|+++|+|+++|+.+|+..|+
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ---~ipssfvar~LG----IP~~gV~gACSTg~eAL~lAa~~Va 124 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQ---ITPTSFAARTLG----IPYLGLFGACSTSMEGLALAALIVN 124 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC---cCcHHHHHHHhC----CCccceeecCHHHHHHHHHHHHHHH
Confidence 345689999999999999999999999999998722 234446666667 5679999999999999999999999
Q ss_pred cCCCcEEEEEeeccc
Q psy4156 140 LLTLHWLGNGAQYHI 154 (160)
Q Consensus 140 sG~~~vlivgG~E~m 154 (160)
+|..+.+++...-+.
T Consensus 125 SG~Ad~VLavtsSH~ 139 (334)
T PRK12404 125 SGGAKYVLTGASSHN 139 (334)
T ss_pred cCCCCEEEEEeCccc
Confidence 998888888765543
No 93
>PLN02192 3-ketoacyl-CoA synthase
Probab=99.25 E-value=3.9e-11 Score=107.75 Aligned_cols=95 Identities=17% Similarity=0.173 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHHHc
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQVL 140 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I~s 140 (160)
++.+...|++++|+++|++|+|||.+|+.|. +....|..+..++.+.|++.++++++++ .+|++|+.|+..|.+++++
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S-~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a 254 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQV 254 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHc
Confidence 4668999999999999999999999988754 4445678888999999997689999999 7999999999999999999
Q ss_pred CCCcEEEEEeecccccC
Q psy4156 141 LTLHWLGNGAQYHITAD 157 (160)
Q Consensus 141 G~~~vlivgG~E~mt~~ 157 (160)
+...-++|.+.|.+|.+
T Consensus 255 ~~~~~aLVVstE~~S~n 271 (511)
T PLN02192 255 HPNSYALVISMENITLN 271 (511)
T ss_pred CCCCeEEEEEEEecccc
Confidence 98777888899999865
No 94
>PLN03173 chalcone synthase; Provisional
Probab=99.25 E-value=2.9e-11 Score=105.36 Aligned_cols=95 Identities=11% Similarity=0.009 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC-ceEEEcccCccHHHHHHHHHHHHH
Q psy4156 61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV-PASLVNMLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v-Pa~~V~~aCaSGl~Al~~Aa~~I~ 139 (160)
.+.+|+.+|+++||+++|++|+|||.+++.+..+. ..|..+..++..+|++..+ +.+.++.+|+++..|+..|.++++
T Consensus 101 ~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~-~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (391)
T PLN03173 101 EVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGV-DMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-cccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHH
Confidence 35689999999999999999999999999887653 3577888899999998555 477889999999999999999999
Q ss_pred cCCCcEEEEEeeccccc
Q psy4156 140 LLTLHWLGNGAQYHITA 156 (160)
Q Consensus 140 sG~~~vlivgG~E~mt~ 156 (160)
++..+-++|.++|.+|.
T Consensus 180 ~~~~~~vLVV~~E~~S~ 196 (391)
T PLN03173 180 NNKGARVLVVCSEITAV 196 (391)
T ss_pred hCCCCeEEEEEEehhhh
Confidence 99888888889999884
No 95
>PLN03172 chalcone synthase family protein; Provisional
Probab=99.25 E-value=3.8e-11 Score=104.71 Aligned_cols=94 Identities=11% Similarity=0.004 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc-eEEEcccCccHHHHHHHHHHHHHc
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP-ASLVNMLCGSGLKSVTLTSRQQVL 140 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP-a~~V~~aCaSGl~Al~~Aa~~I~s 140 (160)
..+|+.+|+++||+++|+++++||.+++++.++. ..|..+..++..+|++..+. .+.++.+|+++..|+..|..++++
T Consensus 102 a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~-~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~ 180 (393)
T PLN03172 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGV-DMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-cCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHc
Confidence 5589999999999999999999999998887753 36778889999999985564 578899999999999999999999
Q ss_pred CCCcEEEEEeeccccc
Q psy4156 141 LTLHWLGNGAQYHITA 156 (160)
Q Consensus 141 G~~~vlivgG~E~mt~ 156 (160)
+.++-+++.+.|.+|+
T Consensus 181 ~~~~~vLVV~~E~~S~ 196 (393)
T PLN03172 181 NAGSRVLVVCSEITAV 196 (393)
T ss_pred CCCCeEEEEEEehhhh
Confidence 9888888889999885
No 96
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.23 E-value=7.6e-11 Score=102.05 Aligned_cols=92 Identities=18% Similarity=0.179 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCc----eEEEeeecC---------------------C----CCCC-hHHHHHHHcCC
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISE----VILGQALTA---------------------G----QGQN-PARQASIKANI 111 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~---------------------~----~g~~-~ar~~al~~GL 111 (160)
...|+.++++++|+++|++++++|. +++|+.... . ..++ .+..++...|+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 3578899999999999999999984 666653211 0 0112 44556777787
Q ss_pred CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156 112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT 155 (160)
Q Consensus 112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt 155 (160)
. -|.++++.+|+||+.|+..|++.|++|..|++|+||+|.++
T Consensus 152 ~--Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~ 193 (411)
T PRK07314 152 K--GPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAI 193 (411)
T ss_pred C--CccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccC
Confidence 4 68999999999999999999999999999999999999864
No 97
>PLN02854 3-ketoacyl-CoA synthase
Probab=99.16 E-value=1.9e-10 Score=103.51 Aligned_cols=95 Identities=15% Similarity=0.162 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHHHc
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQVL 140 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I~s 140 (160)
++.+...|++++|+++|++|+|||.+|+.|. +....|..+.+++.+.|++.++.+++++ .+|++|+.|+..|.+++++
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~dID~LIv~cS-~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~ 266 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRDIGILIVNCS-LFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKA 266 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHh
Confidence 3456777888999999999999999998643 5445688899999999997789999999 8999999999999999999
Q ss_pred CCCcEEEEEeecccccC
Q psy4156 141 LTLHWLGNGAQYHITAD 157 (160)
Q Consensus 141 G~~~vlivgG~E~mt~~ 157 (160)
+...-++|.+.|.+|.+
T Consensus 267 ~~~~~aLVVstE~~S~~ 283 (521)
T PLN02854 267 NPNSYAVVVSTENITLN 283 (521)
T ss_pred CCCCeEEEEEEeeeecC
Confidence 98888888899999854
No 98
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.13 E-value=2.7e-10 Score=97.58 Aligned_cols=115 Identities=9% Similarity=-0.045 Sum_probs=87.4
Q ss_pred ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcC-CCccccCceEEEeee-----cCCCCCChHHHHHHHcCCC
Q psy4156 39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRAN-VLPNEISEVILGQAL-----TAGQGQNPARQASIKANIP 112 (160)
Q Consensus 39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~ag-I~~~~ID~vi~G~~~-----~~~~g~~~ar~~al~~GLp 112 (160)
+.||.+ +|...+++. -.+.+..+|+.+|++++|++++ +++++||.++..... +....+..+..++..+|++
T Consensus 45 ~~~i~~--~~~~~~~~~-~~~~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~ 121 (348)
T PRK06147 45 GEWLIG--APVPLPPPW-RGPERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLR 121 (348)
T ss_pred CCceEe--ecCcCCccc-CchHHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCC
Confidence 567774 555443322 1245778999999999999999 799999977764321 1111122456777888986
Q ss_pred CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
...|++++..+|+||++||..|+++|++|.++.+|++|+|.++.
T Consensus 122 ~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~ 165 (348)
T PRK06147 122 LEPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLT 165 (348)
T ss_pred CCCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccC
Confidence 55789999999999999999999999999999999999998764
No 99
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.11 E-value=1.5e-10 Score=100.31 Aligned_cols=91 Identities=19% Similarity=0.142 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCCC-------------------CCChHHHHHHHcCCCCCCceEE
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAGQ-------------------GQNPARQASIKANIPNEVPASL 119 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~~-------------------g~~~ar~~al~~GLp~~vPa~~ 119 (160)
..|+.+|++++|+++|++++++| .+++|+..+++. ....+..++...|+. -|+++
T Consensus 88 ~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~~ 165 (424)
T smart00825 88 QRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSVT 165 (424)
T ss_pred HHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCccc
Confidence 34899999999999999999999 789887643221 122555677788984 48999
Q ss_pred EcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156 120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT 155 (160)
Q Consensus 120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt 155 (160)
++.+|+||++|+..|++.|++|..|++|++|+|.+.
T Consensus 166 v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~ 201 (424)
T smart00825 166 VDTACSSSLVALHLACQSLRSGECDMALAGGVNLIL 201 (424)
T ss_pred cccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecC
Confidence 999999999999999999999999999999999764
No 100
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.01 E-value=1.3e-09 Score=93.51 Aligned_cols=93 Identities=20% Similarity=0.260 Sum_probs=76.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCC--------------------------CCCChHHHHHHHcC
Q psy4156 61 KAHDLGSTAIKEVLKRANVLPNEISE----VILGQALTAG--------------------------QGQNPARQASIKAN 110 (160)
Q Consensus 61 ~~~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~--------------------------~g~~~ar~~al~~G 110 (160)
+..+|+.++++++|+++|++++++|. +++|+..+.. .....+..++...|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 34679999999999999999988776 5565543210 01235677888889
Q ss_pred CCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156 111 IPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT 155 (160)
Q Consensus 111 Lp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt 155 (160)
+. -|+++++.+|+|+++|++.|+++|++|..+.+||+|+|.++
T Consensus 150 l~--g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~ 192 (406)
T cd00834 150 LR--GPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALI 192 (406)
T ss_pred CC--CcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCccccc
Confidence 84 69999999999999999999999999999999999999886
No 101
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.00 E-value=7.8e-10 Score=95.18 Aligned_cols=92 Identities=18% Similarity=0.134 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCC-------------------CCCChHHHHHHHcCCCCCCceE
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISE----VILGQALTAG-------------------QGQNPARQASIKANIPNEVPAS 118 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~-------------------~g~~~ar~~al~~GLp~~vPa~ 118 (160)
...|+.+|++++|+++|++++++|. +++|+..++. .....+..++...|+. -|.+
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~~ 164 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPSL 164 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCce
Confidence 4679999999999999999998886 6666653211 0122556678888985 5999
Q ss_pred EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156 119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT 155 (160)
Q Consensus 119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt 155 (160)
+++.+|+|+++|+..|++.|++|..|++|++|+|.++
T Consensus 165 ~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~ 201 (421)
T cd00833 165 TVDTACSSSLVALHLACQSLRSGECDLALVGGVNLIL 201 (421)
T ss_pred eeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccC
Confidence 9999999999999999999999999999999999874
No 102
>PLN00415 3-ketoacyl-CoA synthase
Probab=98.99 E-value=2.7e-09 Score=94.92 Aligned_cols=96 Identities=14% Similarity=0.124 Sum_probs=79.6
Q ss_pred CHHHHHHH-HHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc-cCccHHHHHHHHHHHH
Q psy4156 61 KAHDLGST-AIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM-LCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 61 ~~~dL~~~-A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~-aCaSGl~Al~~Aa~~I 138 (160)
...||+.. |++++|+++|++|+|||.+++.| .+....|..+..++.+.|++.++.+++++. +|++|..|+..|.+++
T Consensus 132 ~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~-T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll 210 (466)
T PLN00415 132 HESELVIFGALNSLFKKTGIEPREVGIFIVNC-SLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLL 210 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEC-cCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHHH
Confidence 34556544 88899999999999999988654 443345778888888999987899999996 9999999999999999
Q ss_pred HcCCCcEEEEEeecccccC
Q psy4156 139 VLLTLHWLGNGAQYHITAD 157 (160)
Q Consensus 139 ~sG~~~vlivgG~E~mt~~ 157 (160)
+++...-+++.+.|.+|..
T Consensus 211 ~a~~~~~aLVVs~E~~S~~ 229 (466)
T PLN00415 211 KANPNTYAVIVSTENMTLS 229 (466)
T ss_pred HhCCCCEEEEEEEeccccc
Confidence 9998777788889988853
No 103
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=98.96 E-value=2.9e-09 Score=91.92 Aligned_cols=94 Identities=15% Similarity=0.074 Sum_probs=74.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCccc-cCc----eEEEeeecCC----------------------CC--CChHHHHHHHcCC
Q psy4156 61 KAHDLGSTAIKEVLKRANVLPNE-ISE----VILGQALTAG----------------------QG--QNPARQASIKANI 111 (160)
Q Consensus 61 ~~~dL~~~A~~~aL~~agI~~~~-ID~----vi~G~~~~~~----------------------~g--~~~ar~~al~~GL 111 (160)
+...|+.++++++|+++|+++++ ++. +++|+..... .. ..++..++...|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45678999999999999998876 553 4555532110 00 2356677778888
Q ss_pred CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156 112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT 155 (160)
Q Consensus 112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt 155 (160)
. .-|.++++.+|+||++|+..|++.|++|..|++|++|+|+++
T Consensus 151 ~-~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~ 193 (407)
T cd00828 151 S-HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL 193 (407)
T ss_pred C-CCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC
Confidence 3 478999999999999999999999999999999999999986
No 104
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.93 E-value=5.4e-09 Score=91.48 Aligned_cols=94 Identities=19% Similarity=0.194 Sum_probs=73.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCC-ccccCceEEEeeecCCCCCC------------------------------hHHHHHH
Q psy4156 59 ELKAHDLGSTAIKEVLKRANVL-PNEISEVILGQALTAGQGQN------------------------------PARQASI 107 (160)
Q Consensus 59 ~~~~~dL~~~A~~~aL~~agI~-~~~ID~vi~G~~~~~~~g~~------------------------------~ar~~al 107 (160)
..+..+|+..+++++|+++|++ +++++...+|++.+...+.. ++..++.
T Consensus 74 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~ 153 (421)
T PTZ00050 74 ESRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAI 153 (421)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHH
Confidence 3456889999999999999999 78888777777664432110 1223334
Q ss_pred HcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156 108 KANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI 154 (160)
Q Consensus 108 ~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m 154 (160)
..|+. =|.+++..+|+||++|+..|++.|++|..|++|+||+|++
T Consensus 154 ~~~l~--Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~ 198 (421)
T PTZ00050 154 KHKLK--GPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEAS 198 (421)
T ss_pred HhCCC--CcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECccccc
Confidence 44542 4889999999999999999999999999999999999985
No 105
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.87 E-value=1.1e-08 Score=89.09 Aligned_cols=90 Identities=19% Similarity=0.172 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHcCCCcccc-C----ceEEEeeecCCC-------------------------CCC-hHHHHHHHcCC
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEI-S----EVILGQALTAGQ-------------------------GQN-PARQASIKANI 111 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~I-D----~vi~G~~~~~~~-------------------------g~~-~ar~~al~~GL 111 (160)
..|+..+++++|+++|++++++ + .+++|+...... ..+ .+..++...|+
T Consensus 83 ~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 162 (424)
T PRK06333 83 ILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGF 162 (424)
T ss_pred HHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhCC
Confidence 4678899999999999998877 3 356665422100 011 33456667788
Q ss_pred CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156 112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI 154 (160)
Q Consensus 112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m 154 (160)
.-|+++++.+|+||+.|+..|++.|++|..|++||||+|++
T Consensus 163 --~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~ 203 (424)
T PRK06333 163 --KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAA 203 (424)
T ss_pred --CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence 48999999999999999999999999999999999999985
No 106
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.85 E-value=4.3e-08 Score=85.91 Aligned_cols=89 Identities=18% Similarity=0.177 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHcCCCccccC----ceEEEeeecCC-------------------------CCCC-hHHHHHHHcCCCC
Q psy4156 64 DLGSTAIKEVLKRANVLPNEIS----EVILGQALTAG-------------------------QGQN-PARQASIKANIPN 113 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~-------------------------~g~~-~ar~~al~~GLp~ 113 (160)
.++..+++++|+++|+++++.+ .+++|+..+.. ..++ ++..++...|+.
T Consensus 76 ~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~- 154 (414)
T PRK08722 76 QYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLR- 154 (414)
T ss_pred HHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCC-
Confidence 4778899999999999765444 37777753211 0012 556667777874
Q ss_pred CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156 114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI 154 (160)
Q Consensus 114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m 154 (160)
=|.+++..+|+|++.||..|++.|++|..|++|+||+|..
T Consensus 155 -Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~ 194 (414)
T PRK08722 155 -GPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKA 194 (414)
T ss_pred -CCccccccccHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Confidence 6999999999999999999999999999999999999974
No 107
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.76 E-value=3.6e-08 Score=85.89 Aligned_cols=91 Identities=19% Similarity=0.165 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-----------------------------CC-ChHHHHHHHcCC
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-----------------------------GQ-NPARQASIKANI 111 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-----------------------------g~-~~ar~~al~~GL 111 (160)
...|+.+|++++|+++|+++++++.--+|...+... .+ .++..++...|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 467899999999999999998887544444332110 01 255667777888
Q ss_pred CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156 112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI 154 (160)
Q Consensus 112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m 154 (160)
. -|.+++..+|+|++.|+..|++.|++|..|+++++|+|..
T Consensus 152 ~--Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~ 192 (406)
T PRK08439 152 K--GPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESA 192 (406)
T ss_pred C--CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhc
Confidence 5 6779999999999999999999999999999999999963
No 108
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=98.75 E-value=2.3e-08 Score=86.81 Aligned_cols=93 Identities=20% Similarity=0.183 Sum_probs=81.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHH
Q psy4156 58 SELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137 (160)
Q Consensus 58 ~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~ 137 (160)
.+++..-|+++|++.+|+|+++||++|+.|++|+-.+....=..+..++..+|+++.+-++++..+|-+|..||++|...
T Consensus 47 ~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~ 126 (377)
T COG3425 47 WDEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGW 126 (377)
T ss_pred CchhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHHH
Confidence 57888999999999999999999999999999997765443347788889999998899999999999999999999999
Q ss_pred HHcCCC-cEEEEEe
Q psy4156 138 QVLLTL-HWLGNGA 150 (160)
Q Consensus 138 I~sG~~-~vlivgG 150 (160)
|.||.. +++++++
T Consensus 127 v~s~~~~~~LvI~s 140 (377)
T COG3425 127 VESGMISYGLVIGA 140 (377)
T ss_pred HHcCCccceEEEee
Confidence 999955 5555554
No 109
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=98.74 E-value=5e-08 Score=85.14 Aligned_cols=88 Identities=16% Similarity=0.053 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHcCCCc---cccCceEEEeeec----------------CCCC--------C-ChHHHHHHHcCCCC
Q psy4156 62 AHDLGSTAIKEVLKRANVLP---NEISEVILGQALT----------------AGQG--------Q-NPARQASIKANIPN 113 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~---~~ID~vi~G~~~~----------------~~~g--------~-~~ar~~al~~GLp~ 113 (160)
...|+..|++++|+++|+++ +.+. +++|.... .... + ..+..++...|+.
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riG-vivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIG-LVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEE-EEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC-
Confidence 45689999999999999863 4554 44553321 0000 1 1344566777884
Q ss_pred CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeec
Q psy4156 114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQY 152 (160)
Q Consensus 114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E 152 (160)
-|++++..+|+|++.||..|++.|++|..|.+|++|.|
T Consensus 158 -G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~ 195 (410)
T PRK07103 158 -GEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGAL 195 (410)
T ss_pred -CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccc
Confidence 58899999999999999999999999999999999886
No 110
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.74 E-value=5.2e-08 Score=78.50 Aligned_cols=91 Identities=21% Similarity=0.229 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHcCCCccccC-----ceEEEeeecCC----------C-------------CCC-hHHHHHHHcCCCC
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEIS-----EVILGQALTAG----------Q-------------GQN-PARQASIKANIPN 113 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID-----~vi~G~~~~~~----------~-------------g~~-~ar~~al~~GLp~ 113 (160)
..|+..++++||+++|+++++++ .+++|+...+. . .++ ++..++...|+.
T Consensus 88 ~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~- 166 (254)
T PF00109_consen 88 SRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLR- 166 (254)
T ss_dssp HHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB--
T ss_pred hhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCC-
Confidence 46899999999999999996543 26777765511 0 122 455777788884
Q ss_pred CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeec-ccc
Q psy4156 114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQY-HIT 155 (160)
Q Consensus 114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E-~mt 155 (160)
=|+++++.+|+||+.|+..|++.|++|..|++|+||+| .++
T Consensus 167 -G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~ 208 (254)
T PF00109_consen 167 -GPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLS 208 (254)
T ss_dssp -SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SS
T ss_pred -Cccccccccccccccccchhcccccccccccccccccccccc
Confidence 78999999999999999999999999999999999999 543
No 111
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.70 E-value=9.2e-08 Score=84.23 Aligned_cols=91 Identities=20% Similarity=0.153 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcc-----ccCceEEEeeecCCC-------------------------CC-ChHHHHHHHcC
Q psy4156 62 AHDLGSTAIKEVLKRANVLPN-----EISEVILGQALTAGQ-------------------------GQ-NPARQASIKAN 110 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~-----~ID~vi~G~~~~~~~-------------------------g~-~~ar~~al~~G 110 (160)
...|+.+|+.++|+++|+++. +...+++|+..+... .+ .++..++...|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 457899999999999998642 355688887532210 01 13445677778
Q ss_pred CCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156 111 IPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI 154 (160)
Q Consensus 111 Lp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m 154 (160)
+. -|.++|+.+|+||+.|+..|++.|++|..|++|+||+|++
T Consensus 173 l~--Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~ 214 (437)
T PLN02836 173 FQ--GPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESS 214 (437)
T ss_pred CC--CceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEcccccc
Confidence 74 8999999999999999999999999999999999999974
No 112
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=98.66 E-value=2.2e-07 Score=75.95 Aligned_cols=96 Identities=11% Similarity=0.062 Sum_probs=76.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHH
Q psy4156 60 LKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 60 ~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I 138 (160)
..+.+|+.+|++++|+++|++++||+.+++.++++. ..|.+--.+...+||+.++--+.+. .+|.+|..+|..|....
T Consensus 98 ~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~-~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~ 176 (226)
T PF00195_consen 98 EEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGI-AAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIA 176 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSS-ECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCc-CCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHH
Confidence 346789999999999999999999999999887653 3456666777888998777755554 79999999999999988
Q ss_pred HcCCCcEEEEEeeccccc
Q psy4156 139 VLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 139 ~sG~~~vlivgG~E~mt~ 156 (160)
++.-...+++..+|-+|+
T Consensus 177 ~~~p~a~VLvv~vElcsl 194 (226)
T PF00195_consen 177 RANPGARVLVVCVELCSL 194 (226)
T ss_dssp HHSTT-EEEEEEEEEGGG
T ss_pred hCCccceEEEEEEEeeEE
Confidence 888788888899998885
No 113
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=98.65 E-value=2.3e-07 Score=78.19 Aligned_cols=95 Identities=15% Similarity=0.191 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHHHc
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQVL 140 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I~s 140 (160)
++.++..+++++|+++|++|+|||.+++.|.... ..|.++.++..+.|+..++-.+++. .+|++|+-++.+|.+.++.
T Consensus 83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~-ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~ 161 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFN-PTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQA 161 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCC-cCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHh
Confidence 5668899999999999999999999998887532 4578888999999998788888886 6999999999999999999
Q ss_pred CCCcEEEEEeecccccC
Q psy4156 141 LTLHWLGNGAQYHITAD 157 (160)
Q Consensus 141 G~~~vlivgG~E~mt~~ 157 (160)
--...+++...|.+|..
T Consensus 162 ~p~~~ALVVstE~~s~~ 178 (290)
T PF08392_consen 162 HPNSYALVVSTENISAN 178 (290)
T ss_pred CCCcEEEEEEEeecccc
Confidence 88888899999998864
No 114
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.62 E-value=3e-07 Score=79.95 Aligned_cols=87 Identities=20% Similarity=0.193 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHcCCCc--cccCceEEEeeecCC----------------------------CCCC-hHHHHHHHcCCC
Q psy4156 64 DLGSTAIKEVLKRANVLP--NEISEVILGQALTAG----------------------------QGQN-PARQASIKANIP 112 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~--~~ID~vi~G~~~~~~----------------------------~g~~-~ar~~al~~GLp 112 (160)
.++..+++++|+++|+++ +.+ .+++|+..+.. ..++ ++..++...|+.
T Consensus 58 ~~~~~a~~~Al~dagl~~~~~~~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~ 136 (381)
T PRK05952 58 DLTKTVVTAALKDAGLTPPLTDC-GVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ 136 (381)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCE-EEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC
Confidence 466789999999999975 333 46777743210 0011 455677777874
Q ss_pred CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156 113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYH 153 (160)
Q Consensus 113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~ 153 (160)
=|.+++..+|+||+.|+..|++.|++|..|+.|+||+|.
T Consensus 137 --Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~ 175 (381)
T PRK05952 137 --GPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEA 175 (381)
T ss_pred --CccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccc
Confidence 589999999999999999999999999999999999996
No 115
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.50 E-value=6.9e-07 Score=78.24 Aligned_cols=90 Identities=16% Similarity=0.066 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCCC-------------------------------------CC-
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAGQ-------------------------------------GQ- 99 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~~-------------------------------------g~- 99 (160)
...|+..|++++|+++|+++++.+ .+++|+..+... .+
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 455888999999999999654322 256777543210 01
Q ss_pred ChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYH 153 (160)
Q Consensus 100 ~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~ 153 (160)
..+..++...|+. =|.+++..+|+||++||..|++.|++|..|+.|+||+|.
T Consensus 153 ~~a~~is~~~gl~--Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~ 204 (398)
T PRK06519 153 LLAGNISIVHKVT--GSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYN 204 (398)
T ss_pred HHHHHHHHHhCCC--CccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeecc
Confidence 1445677778874 699999999999999999999999999999999999986
No 116
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=98.49 E-value=5.5e-07 Score=70.90 Aligned_cols=85 Identities=13% Similarity=0.193 Sum_probs=68.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCC--CCCceEEEcccCccHHHHHHHHH
Q psy4156 58 SELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIP--NEVPASLVNMLCGSGLKSVTLTS 135 (160)
Q Consensus 58 ~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp--~~vPa~~V~~aCaSGl~Al~~Aa 135 (160)
.++++..|+..|++.+|++.+++|++|+.+++|+=..--..=.++.++...+|++ ..+-++++.++|-+|..|++.|.
T Consensus 49 ~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~ 128 (174)
T PF01154_consen 49 PDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAV 128 (174)
T ss_dssp TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHH
Confidence 5788999999999999999999999999999998543222223777888889984 24567899999999999999999
Q ss_pred HHHHcCC
Q psy4156 136 RQQVLLT 142 (160)
Q Consensus 136 ~~I~sG~ 142 (160)
..|+++.
T Consensus 129 ~~v~s~~ 135 (174)
T PF01154_consen 129 NWVASSP 135 (174)
T ss_dssp HHHCSTT
T ss_pred HHHhcCC
Confidence 9999984
No 117
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.48 E-value=9.1e-07 Score=77.71 Aligned_cols=50 Identities=12% Similarity=-0.072 Sum_probs=44.9
Q ss_pred hHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeec
Q psy4156 101 PARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQY 152 (160)
Q Consensus 101 ~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E 152 (160)
.+..++...|+. -|+++++.+|+|++.|+..|++.|++|.+|.+||+|+|
T Consensus 154 ~a~~i~~~~gl~--G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d 203 (425)
T PRK06501 154 IADRLADRFGTR--GLPISLSTACASGATAIQLGVEAIRRGETDRALCIATD 203 (425)
T ss_pred HHHHHHHHhCCC--CCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeec
Confidence 455567777884 68899999999999999999999999999999999999
No 118
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.47 E-value=8.4e-07 Score=80.55 Aligned_cols=88 Identities=13% Similarity=0.088 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHcCCCcccc---C----ceEEEeeecCCC------------------------CCC-hHHHHHHHcCC
Q psy4156 64 DLGSTAIKEVLKRANVLPNEI---S----EVILGQALTAGQ------------------------GQN-PARQASIKANI 111 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~I---D----~vi~G~~~~~~~------------------------g~~-~ar~~al~~GL 111 (160)
.++..+++++|+++|++++.+ + .+++|+..+... ..+ .+..++...|+
T Consensus 201 ~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl 280 (540)
T PLN02787 201 LYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGW 280 (540)
T ss_pred HHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCC
Confidence 366789999999999986532 2 478887643210 011 23456667787
Q ss_pred CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156 112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYH 153 (160)
Q Consensus 112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~ 153 (160)
. -|.++++.+|+|++.|+..|++.|++|..|+.|+||+|.
T Consensus 281 ~--Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~ 320 (540)
T PLN02787 281 M--GPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDA 320 (540)
T ss_pred C--CCccccccccccHHHHHHHHHHHHHcCCCCEEEEecccc
Confidence 4 789999999999999999999999999999999999995
No 119
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.45 E-value=1.1e-06 Score=77.06 Aligned_cols=91 Identities=12% Similarity=0.095 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCC----------------C----------C-CChHHHHHHHcC
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISE----VILGQALTAG----------------Q----------G-QNPARQASIKAN 110 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~----------------~----------g-~~~ar~~al~~G 110 (160)
...++..|++++|+++|+++++.+. +++|+..+.. . . ..++..++...|
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 3457889999999999997654432 5566532110 0 0 114455677778
Q ss_pred CCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156 111 IPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI 154 (160)
Q Consensus 111 Lp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m 154 (160)
+. =|.+++..+|+||+.|+..|++.|++|+.|+.|+||+|..
T Consensus 151 l~--Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~ 192 (406)
T PRK07967 151 IK--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEEL 192 (406)
T ss_pred CC--CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence 74 6899999999999999999999999999999999999864
No 120
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.44 E-value=8.6e-07 Score=77.51 Aligned_cols=91 Identities=11% Similarity=0.072 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHcCCCc-cccC----ceEEEeeecCC---------------C----------CCC-hHHHHHHHcCC
Q psy4156 63 HDLGSTAIKEVLKRANVLP-NEIS----EVILGQALTAG---------------Q----------GQN-PARQASIKANI 111 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~-~~ID----~vi~G~~~~~~---------------~----------g~~-~ar~~al~~GL 111 (160)
..|+..+++++|+++|++. +.++ .+++|+..+.. . .++ ++..++...|+
T Consensus 74 ~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 153 (405)
T PRK09116 74 SLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGL 153 (405)
T ss_pred HHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCC
Confidence 4578899999999999843 2222 46777643210 0 011 45566777787
Q ss_pred CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156 112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT 155 (160)
Q Consensus 112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt 155 (160)
. =|.+++..+|+|+++|+..|++.|++|+.|++|+||+|.++
T Consensus 154 ~--Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~ 195 (405)
T PRK09116 154 K--GRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELC 195 (405)
T ss_pred C--CCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcC
Confidence 4 69999999999999999999999999999999999999754
No 121
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.44 E-value=1.2e-06 Score=76.27 Aligned_cols=90 Identities=21% Similarity=0.168 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCCC------------C-----C---------ChHHHHHHHcCC
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAGQ------------G-----Q---------NPARQASIKANI 111 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~~------------g-----~---------~~ar~~al~~GL 111 (160)
...|+..+++++|+++|++++.++ .+++|+..+... + + ..+..++...|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 356788999999999999877654 367776532210 0 0 133456666777
Q ss_pred CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156 112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI 154 (160)
Q Consensus 112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m 154 (160)
. =|++++..+|+||+.|+..|++.|++|. |+.|+||+|..
T Consensus 151 ~--Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~ 190 (399)
T cd00832 151 R--GPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSA 190 (399)
T ss_pred C--CCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccc
Confidence 4 7999999999999999999999999999 99999999873
No 122
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.34 E-value=1.8e-06 Score=73.41 Aligned_cols=107 Identities=11% Similarity=0.032 Sum_probs=82.5
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCcc
Q psy4156 48 TPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGS 126 (160)
Q Consensus 48 Tpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaS 126 (160)
+.|+.+...|- +.+..|+++|.|+||+.+++.|+|||.++..++++- ..|.+--.+...+||+..+--+-+. .+|+.
T Consensus 63 ~~f~ekN~ifi-e~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~-~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaa 140 (356)
T COG3424 63 HGFGEKNEIFI-EEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGL-ATPSLDARIVGELGLSPDTRRVPVWGLGCAA 140 (356)
T ss_pred CChhhhhhhHH-HHHHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccc-cCCChhHHHHhhcCCCCccceeeeecchhhh
Confidence 44665543332 346779999999999999999999999999988753 3455544566677997665544444 69999
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 127 GLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 127 Gl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
|..++..|+.+.++.=...+++.++|-+|+
T Consensus 141 ga~glara~~y~ra~P~~~vlvV~vELCSL 170 (356)
T COG3424 141 GAAGLARARDYCRAAPDANVLVVCVELCSL 170 (356)
T ss_pred hhhHHHHHHHHHhhCccceEEEEEeeeeee
Confidence 999999999999999667777778888775
No 123
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.32 E-value=3.1e-06 Score=72.74 Aligned_cols=90 Identities=16% Similarity=0.121 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHcCC--CccccCceEEEeeecCC------------CC-------------C-ChHHHHHHHcCCCC
Q psy4156 62 AHDLGSTAIKEVLKRANV--LPNEISEVILGQALTAG------------QG-------------Q-NPARQASIKANIPN 113 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI--~~~~ID~vi~G~~~~~~------------~g-------------~-~~ar~~al~~GLp~ 113 (160)
...++..|++++++++|+ +++.+ .+++|+..+.. .+ + .++..++...|+.
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~- 81 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK- 81 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC-
Confidence 456788999999999996 55665 46666653221 00 1 1445566777774
Q ss_pred CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156 114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI 154 (160)
Q Consensus 114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m 154 (160)
=|.+++..+|+||+.||..|++.|++|+.|+.|+||.|..
T Consensus 82 -Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~ 121 (342)
T PRK14691 82 -GPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAV 121 (342)
T ss_pred -CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Confidence 7999999999999999999999999999999999999863
No 124
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.21 E-value=6.4e-06 Score=72.37 Aligned_cols=88 Identities=20% Similarity=0.220 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHcCC---CccccCceEEEeeecCCC------------C-------------CC-hHHHHHHHcCCCCC
Q psy4156 64 DLGSTAIKEVLKRANV---LPNEISEVILGQALTAGQ------------G-------------QN-PARQASIKANIPNE 114 (160)
Q Consensus 64 dL~~~A~~~aL~~agI---~~~~ID~vi~G~~~~~~~------------g-------------~~-~ar~~al~~GLp~~ 114 (160)
.++..+++++|+++|+ +++.+ .+++|+..+... + ++ ++..+....|+.
T Consensus 85 ~~~l~aa~~AledAg~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~-- 161 (418)
T PRK07910 85 RMSTVLGRRVWENAGSPEVDTNRL-MVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK-- 161 (418)
T ss_pred HHHHHHHHHHHHHcCCCCCCcccE-EEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCC--
Confidence 4778899999999996 34444 356676532210 0 11 334556666653
Q ss_pred CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156 115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI 154 (160)
Q Consensus 115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m 154 (160)
-|.+++..+|+|++.|+..|++.|++|..|+.|+||+|.+
T Consensus 162 G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~ 201 (418)
T PRK07910 162 AGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETR 201 (418)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEcccccc
Confidence 6889999999999999999999999999999999999874
No 125
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.13 E-value=1e-05 Score=78.56 Aligned_cols=88 Identities=20% Similarity=0.195 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHcCCCccccC----ceEEEeeecCCCCC-------------------ChHHHHHHHcCCCCCCceEEEc
Q psy4156 65 LGSTAIKEVLKRANVLPNEIS----EVILGQALTAGQGQ-------------------NPARQASIKANIPNEVPASLVN 121 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~~g~-------------------~~ar~~al~~GLp~~vPa~~V~ 121 (160)
|.-+.+-++||++|++|+.+. .|+.|....++... .++-.++...++. =|++.|+
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~--GPs~~vd 171 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLS--GPSVTVD 171 (1061)
T ss_pred HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCC--CCCcccc
Confidence 888999999999999999888 57888776654211 1344456667874 7999999
Q ss_pred ccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156 122 MLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI 154 (160)
Q Consensus 122 ~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m 154 (160)
.+|+|++.|+++|++.|++|..|++++||+--+
T Consensus 172 taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~ 204 (1061)
T COG3321 172 TACSSSLVAVHLACQSLRLGECDLALAGGVNLV 204 (1061)
T ss_pred chhhHHHHHHHHHHHHHHcCCCCEEEecceEec
Confidence 999999999999999999999999999999554
No 126
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=97.98 E-value=4e-05 Score=65.20 Aligned_cols=84 Identities=15% Similarity=0.143 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCC
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLT 142 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~ 142 (160)
..|..+|++.+|++++++++|||.++.|-...+. -.+...++.+ ++|-+-+-.+|++.+.++.+|+..|.+|.
T Consensus 52 ~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~---i~s~f~ar~l----~iPf~GlygACST~~e~l~laa~~vdgg~ 124 (329)
T PF07451_consen 52 SKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI---ISSSFAARDL----GIPFLGLYGACSTMMESLALAAMLVDGGF 124 (329)
T ss_dssp HHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC---CHHHHHHHHH----T--EEEB--CCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh---HHHHHHHHhc----CCCccchhhHHHHHHHHHHHHHHHHhCCC
Confidence 4589999999999999999999999988765432 1233344433 47899999999999999999999999998
Q ss_pred CcEEEEEeecc
Q psy4156 143 LHWLGNGAQYH 153 (160)
Q Consensus 143 ~~vlivgG~E~ 153 (160)
.+-++++..-+
T Consensus 125 a~~vla~tSSH 135 (329)
T PF07451_consen 125 ADYVLAATSSH 135 (329)
T ss_dssp -SEEEEEEEE-
T ss_pred cceEEEEeccc
Confidence 88888776544
No 127
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=97.95 E-value=3.3e-05 Score=80.50 Aligned_cols=50 Identities=8% Similarity=0.131 Sum_probs=43.5
Q ss_pred HHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156 102 ARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYH 153 (160)
Q Consensus 102 ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~ 153 (160)
+..++...||. =|+++|+.+|+|++.||++|++.|++|..|+.|+||++-
T Consensus 186 A~RIS~~f~L~--Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~ 235 (2582)
T TIGR02813 186 SGRIANRFDLG--GMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCT 235 (2582)
T ss_pred HHHHHHHhCCC--CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccee
Confidence 34455566663 689999999999999999999999999999999999875
No 128
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.87 E-value=6.6e-05 Score=66.29 Aligned_cols=91 Identities=18% Similarity=0.151 Sum_probs=66.6
Q ss_pred CHHHHHHHHHHHHHHHcCCC-ccccC---ceEEEeeecCCC--------------------------CCC-hHHHHHHHc
Q psy4156 61 KAHDLGSTAIKEVLKRANVL-PNEIS---EVILGQALTAGQ--------------------------GQN-PARQASIKA 109 (160)
Q Consensus 61 ~~~dL~~~A~~~aL~~agI~-~~~ID---~vi~G~~~~~~~--------------------------g~~-~ar~~al~~ 109 (160)
+...|+..|+++|++++|++ .+..+ .+++|+...... -++ .+..++...
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence 35678999999999999998 33343 234443322111 011 234555666
Q ss_pred CCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156 110 NIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYH 153 (160)
Q Consensus 110 GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~ 153 (160)
|+. =|.+++..+|+||.+||..|+++|++|+.|+.|+||.|.
T Consensus 150 g~~--G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~ 191 (412)
T COG0304 150 GLK--GPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEA 191 (412)
T ss_pred CCC--CCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEccccc
Confidence 763 678889999999999999999999999999999999976
No 129
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=97.76 E-value=5.7e-05 Score=51.57 Aligned_cols=39 Identities=8% Similarity=-0.096 Sum_probs=33.6
Q ss_pred EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156 118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA 156 (160)
Q Consensus 118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~ 156 (160)
|+++++|++++.|++.|..+|++|.++-+++.+.|+++.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~ 39 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR 39 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence 689999999999999999999999877788888888875
No 130
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=97.72 E-value=0.00012 Score=63.51 Aligned_cols=53 Identities=15% Similarity=0.006 Sum_probs=47.5
Q ss_pred hHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156 101 PARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT 155 (160)
Q Consensus 101 ~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt 155 (160)
.+..++...|+. -|.+++..+|+|++.||..|++.|++|..+.+|++|+|.++
T Consensus 139 ~a~~ia~~lgl~--Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~ 191 (392)
T PRK09185 139 LADFLRAYLGLS--GPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLC 191 (392)
T ss_pred HHHHHHHHhCCC--CCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccC
Confidence 556778888885 49999999999999999999999999999999999999754
No 131
>KOG1394|consensus
Probab=97.58 E-value=0.00016 Score=62.95 Aligned_cols=90 Identities=23% Similarity=0.233 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHcCCCcc---ccCc----eEEEeeecCCC-----------------CC--------C-hHHHHHHHc
Q psy4156 63 HDLGSTAIKEVLKRANVLPN---EISE----VILGQALTAGQ-----------------GQ--------N-PARQASIKA 109 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~---~ID~----vi~G~~~~~~~-----------------g~--------~-~ar~~al~~ 109 (160)
..|+..|+++||+++++-+. +.|. |.+|+...+.+ .| | .+-+++.+.
T Consensus 95 ~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~ 174 (440)
T KOG1394|consen 95 TKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKY 174 (440)
T ss_pred HHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhh
Confidence 45888999999999987664 3343 33343322110 01 1 123555566
Q ss_pred CCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156 110 NIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI 154 (160)
Q Consensus 110 GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m 154 (160)
||. -|..++..+|++|..++-.|.++|+.|..|+.++||.|..
T Consensus 175 gl~--GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~ 217 (440)
T KOG1394|consen 175 GLR--GPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEAC 217 (440)
T ss_pred cCc--CCchhhHhhhhhccchHHHHHHHHHhCccceeeccCccee
Confidence 663 6788899999999999999999999999999999999963
No 132
>KOG1393|consensus
Probab=95.28 E-value=0.095 Score=46.27 Aligned_cols=98 Identities=11% Similarity=0.099 Sum_probs=71.8
Q ss_pred eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeec-CCCCCChHHHHHHHc--CCCCCCc
Q psy4156 40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT-AGQGQNPARQASIKA--NIPNEVP 116 (160)
Q Consensus 40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~-~~~g~~~ar~~al~~--GLp~~vP 116 (160)
-|-+|-+.+..|-- -..++...|...+.+.+++|.+|+++.|..+-+|+=+- +..-.--.-..++.. |-. .+-
T Consensus 41 KytIGLGq~~Mgfc---sdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNt-dIE 116 (462)
T KOG1393|consen 41 KYTIGLGQTQMGFC---SDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DIE 116 (462)
T ss_pred ceEeccCcceeccc---CchhhhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCC-ccc
Confidence 45666666654411 12455778999999999999999999999999998542 211111123344443 654 789
Q ss_pred eEEEcccCccHHHHHHHHHHHHHcC
Q psy4156 117 ASLVNMLCGSGLKSVTLTSRQQVLL 141 (160)
Q Consensus 117 a~~V~~aCaSGl~Al~~Aa~~I~sG 141 (160)
+++.-++|=+|..|+..|...|+|-
T Consensus 117 GiDttnACYGGtaALfnavnWiESs 141 (462)
T KOG1393|consen 117 GIDTTNACYGGTAALFNAVNWIESS 141 (462)
T ss_pred cccccccccccHHHHHHHhhhhhhc
Confidence 9999999999999999999999995
No 133
>KOG1202|consensus
Probab=95.23 E-value=0.017 Score=57.34 Aligned_cols=90 Identities=16% Similarity=0.095 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCCCC-----C-----C----hHH-HHHHHcC--CCCCCceEEEc
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAGQG-----Q-----N----PAR-QASIKAN--IPNEVPASLVN 121 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~~g-----~-----~----~ar-~~al~~G--Lp~~vPa~~V~ 121 (160)
-.|..|+.-+|+-++||+|++.. .+++|+..+...+ + + .+| +.+.+.. ++-.=|++.++
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~D 167 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVD 167 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhhh
Confidence 45888999999999999998875 4688887654321 0 0 122 2222221 12246899999
Q ss_pred ccCccHHHHHHHHHHHHHcCCCcEEEEEeec
Q psy4156 122 MLCGSGLKSVTLTSRQQVLLTLHWLGNGAQY 152 (160)
Q Consensus 122 ~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E 152 (160)
.+|+|++.|++.|.+.|.+|+.|..||+|..
T Consensus 168 tacsSsl~al~~a~~~~r~gqcd~AiVaG~~ 198 (2376)
T KOG1202|consen 168 TACSSSLMALQNAFQDIRSGQCDAAIVAGAN 198 (2376)
T ss_pred hhhHHHHHHHHHHHHhhhccCCchhhhcccc
Confidence 9999999999999999999999999999875
No 134
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=92.56 E-value=0.84 Score=41.33 Aligned_cols=106 Identities=10% Similarity=-0.129 Sum_probs=61.2
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC--C
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE--V 115 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~--v 115 (160)
+.|||.|.....-........+.........+++.+++++|+.++|||.+=+=. ..+.......+.+||... .
T Consensus 266 ~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elyd-----cF~~~~~~~~E~LGl~~~g~~ 340 (498)
T PRK08257 266 RWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYS-----CFPSAVQVAARELGLDLDDPR 340 (498)
T ss_pred ceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEecc-----CCHHHHHHHHHHcCcCCCCCC
Confidence 478998876542111100112222223345799999999999999999764311 122333445567888643 3
Q ss_pred ceEEEc--------ccCccHHHHHHHHHHHHHcCCCcEEEEE
Q psy4156 116 PASLVN--------MLCGSGLKSVTLTSRQQVLLTLHWLGNG 149 (160)
Q Consensus 116 Pa~~V~--------~aCaSGl~Al~~Aa~~I~sG~~~vlivg 149 (160)
| +++. -..++|+..+..+..+++....+..++.
T Consensus 341 p-vN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~ 381 (498)
T PRK08257 341 P-LTVTGGLPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVT 381 (498)
T ss_pred C-cCCCcChhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEE
Confidence 4 3333 2345577788888888885434444443
No 135
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=91.77 E-value=0.091 Score=35.97 Aligned_cols=58 Identities=21% Similarity=0.155 Sum_probs=32.1
Q ss_pred HHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc----ccCccHHHHHHHHHH
Q psy4156 74 LKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN----MLCGSGLKSVTLTSR 136 (160)
Q Consensus 74 L~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~----~aCaSGl~Al~~Aa~ 136 (160)
|+++|++++|||.++.-+.. ....+.++...|+|.+....++. -+|++-..++..+.+
T Consensus 1 L~~~g~~~~did~~i~hq~~-----~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~ 62 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS-----KKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALE 62 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS-----HHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHH
T ss_pred CccccCCHHHCCEEEeCCCC-----HHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHH
Confidence 68999999999998864321 23455677788998553333333 344555555554444
No 136
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=90.42 E-value=0.67 Score=33.46 Aligned_cols=82 Identities=20% Similarity=0.140 Sum_probs=44.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCC---CCCCceEEEc-----ccCccHHH
Q psy4156 59 ELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANI---PNEVPASLVN-----MLCGSGLK 129 (160)
Q Consensus 59 ~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GL---p~~vPa~~V~-----~aCaSGl~ 129 (160)
..+...+ .++++++|++++++|++||.|.. ....... ...-.+.+....+- ...+|...+- ...+||+.
T Consensus 21 ~p~~~~~-~~~i~~al~~agi~~~~I~~i~~-hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~ 98 (119)
T PF02801_consen 21 APNGAAL-ARAIRRALADAGISPEDIDYIEA-HGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLL 98 (119)
T ss_dssp STTHHHH-HHHHHHHHHHHTS-GGGEEEEE-----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHH
T ss_pred CcCHHHH-HHHHHHHHhhhccccccceeeee-eccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHH
Confidence 3344444 68899999999999999997643 2221110 11111122211111 1124544332 47888998
Q ss_pred HHHHHHHHHHcCC
Q psy4156 130 SVTLTSRQQVLLT 142 (160)
Q Consensus 130 Al~~Aa~~I~sG~ 142 (160)
.+..+...++.|.
T Consensus 99 ~l~~~~l~l~~~~ 111 (119)
T PF02801_consen 99 SLAKALLALEHGT 111 (119)
T ss_dssp HHHHHHHHHHHTE
T ss_pred HHHHHHHHHhcCC
Confidence 9988888887763
No 137
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.22 E-value=1.1 Score=38.80 Aligned_cols=64 Identities=13% Similarity=0.062 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHc-----CCCCCCceEEEccc----CccHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKA-----NIPNEVPASLVNML----CGSGLKSVTLT 134 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~-----GLp~~vPa~~V~~a----CaSGl~Al~~A 134 (160)
..++++++|+++|+.++|||.++.=+. ....-+.++..+ |+|.+.--.++++. |+|-.-++..+
T Consensus 274 ~~~~i~~~L~~~gl~~~DId~~v~Hq~-----n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a 346 (378)
T PRK06816 274 TIKPLLELVDKRNLDPDDIDYFLPHYS-----SEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDEL 346 (378)
T ss_pred HHHHHHHHHHHcCCChhhCCEEeeCcc-----cHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHH
Confidence 367788899999999999998774222 223444555544 78754323566543 33444444444
No 138
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=87.64 E-value=0.85 Score=39.50 Aligned_cols=51 Identities=18% Similarity=0.175 Sum_probs=31.8
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceE
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVI 88 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi 88 (160)
++++|.|.+.+..........+.....-...+++.+++++||+|+|||.+-
T Consensus 232 ~~v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e 282 (389)
T PRK06064 232 TPVWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAE 282 (389)
T ss_pred CCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 468899876653332211111221112234789999999999999999763
No 139
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=87.32 E-value=0.96 Score=36.65 Aligned_cols=60 Identities=13% Similarity=0.116 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN 121 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~ 121 (160)
-.+.....++++|.++++++.|+|.+.+++--+.+.|-.++-.++.-+.+..++|.+.|+
T Consensus 37 hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvs 96 (220)
T COG1214 37 HAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVS 96 (220)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeC
Confidence 457778899999999999999999999988544334433443333333333457777664
No 140
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=87.30 E-value=1.2 Score=37.97 Aligned_cols=81 Identities=15% Similarity=0.110 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC-Cce-E---EE-cccCccHHHHHHHHHH
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE-VPA-S---LV-NMLCGSGLKSVTLTSR 136 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~-vPa-~---~V-~~aCaSGl~Al~~Aa~ 136 (160)
.+.+.++++++|+++|+.++|||.++.=+ .....-..+...+|+|.+ ++. + ++ |..++|-.-++..+.+
T Consensus 207 ~~~~~~~~~~~L~~~gl~~~did~~i~Hq-----~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 207 FHHVVTAAKGLMEKLGLTPEDFDYAVFHQ-----PNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEeCC-----CChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 44455888899999999999999876521 122355567788899753 232 1 11 2345555566666665
Q ss_pred HHHcCCCcEEEEE
Q psy4156 137 QQVLLTLHWLGNG 149 (160)
Q Consensus 137 ~I~sG~~~vlivg 149 (160)
.++.|. .+++.+
T Consensus 282 ~~~~Gd-~vll~~ 293 (345)
T TIGR00748 282 IAEPGD-RILAVS 293 (345)
T ss_pred hcCCCC-EEEEEE
Confidence 556665 344443
No 141
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=87.28 E-value=1 Score=39.76 Aligned_cols=67 Identities=24% Similarity=0.362 Sum_probs=48.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCC-hHH------HHHHHcCCCCC--CceEEEccc
Q psy4156 57 LSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQN-PAR------QASIKANIPNE--VPASLVNML 123 (160)
Q Consensus 57 ~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~-~ar------~~al~~GLp~~--vPa~~V~~a 123 (160)
|..++..||......+++++++++.+|+|.|+=.+-...+ ..|. .+. .=++.+|.|+. +|.+++++.
T Consensus 60 LtresV~elV~dtl~e~~k~A~l~i~DL~FVVRSTGV~Agf~speevg~~I~ALA~GCl~AGvPP~kMtp~Ms~~ni 136 (445)
T TIGR03285 60 LTRESVAELVKDTLKESLKKAGLDIDDLDFVVRSTGVTAGFASPEEVGEMIKALADGCLKAGVPPSKMTPAMSKENI 136 (445)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCChhhccEEEeccceeeccCCHHHHHHHHHHHHhHHHhcCCCchhcCCccCchhc
Confidence 5677889999999999999999999999999766544322 2121 221 23467899864 888988875
No 142
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=86.84 E-value=7.1 Score=31.78 Aligned_cols=88 Identities=14% Similarity=-0.051 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-----------------------CCC-hHHHHHHHcCCCCCCce
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-----------------------GQN-PARQASIKANIPNEVPA 117 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-----------------------g~~-~ar~~al~~GLp~~vPa 117 (160)
...|+.+++.+++++. +++|.+++++..++.. -.| ++-+.....+. ..|.
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence 4567777777777542 5677888887654321 012 22344445554 5889
Q ss_pred EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156 118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT 155 (160)
Q Consensus 118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt 155 (160)
+++..+=.|+.+|+..|+.+++.|...|+++..-|...
T Consensus 108 tal~a~~~sf~~aLleA~~~l~~~~~~VLlv~~De~~p 145 (218)
T PF13723_consen 108 TALAAGEDSFEAALLEAAAQLAEGAEPVLLVCYDEPLP 145 (218)
T ss_pred EEEecCcchHHHHHHHHHHHHHcCCCCEEEEEeCCCCC
Confidence 99999999999999999999999988999998888654
No 143
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=86.74 E-value=1 Score=39.04 Aligned_cols=97 Identities=13% Similarity=0.039 Sum_probs=53.6
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC---
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE--- 114 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~--- 114 (160)
++++|.|.+........+...+.....-...|++.+++++|++|+|||.+-+=. ......-...+.+|+.+.
T Consensus 231 ~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d-----~ft~~~l~~le~lGl~~~G~~ 305 (385)
T PRK12578 231 SPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHD-----AFTIAEIMGYEDLGFTEKGKG 305 (385)
T ss_pred CCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecC-----cChHHHHHHHHHcCCCCCCch
Confidence 468999876643221111112222222345799999999999999999753311 111222334455676421
Q ss_pred --------------CceEEEccc--------CccHHHHHHHHHHHHHc
Q psy4156 115 --------------VPASLVNML--------CGSGLKSVTLTSRQQVL 140 (160)
Q Consensus 115 --------------vPa~~V~~a--------CaSGl~Al~~Aa~~I~s 140 (160)
.| ++.+.+ -+||+.-+..+..+++-
T Consensus 306 ~~~~~~G~~~~~G~~p-vN~~GG~la~GhP~gatG~~~v~e~~~qLrg 352 (385)
T PRK12578 306 GKFIEEGQSEKGGKVG-VNLFGGLKAKGHPLGATGLSMIYEITKQLRD 352 (385)
T ss_pred HHHHHCCCccCCCCee-eCCCCCcccCCCCccHHHHHHHHHHHHHHhC
Confidence 12 222222 24577788888888873
No 144
>PRK09604 UGMP family protein; Validated
Probab=86.43 E-value=1.7 Score=37.18 Aligned_cols=84 Identities=14% Similarity=-0.024 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCC----CChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHH
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG----QNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g----~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I 138 (160)
.+.....++++|+++++++++||.+.++.--+.+.+ ...|+.++... .+|...|+. +.+.. ++..+
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~----~ipl~~v~h-----~~~ha-~~a~~ 121 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALAL----NKPLIGVNH-----LEGHL-LAPFL 121 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHh----CCCEEeecC-----HHHHH-Hhhhh
Confidence 567778899999999999999999888752111112 12344444433 356555543 33333 34456
Q ss_pred HcCCCc---EEEEEeeccccc
Q psy4156 139 VLLTLH---WLGNGAQYHITA 156 (160)
Q Consensus 139 ~sG~~~---vlivgG~E~mt~ 156 (160)
.+|..+ ++++.|.|+.+.
T Consensus 122 ~s~~~~~~lvl~vsGG~s~~~ 142 (332)
T PRK09604 122 EEEPEFPFLALLVSGGHTQLV 142 (332)
T ss_pred ccCCCCCEEEEEecCCccEEE
Confidence 788543 567777666554
No 145
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=86.29 E-value=4.1 Score=32.20 Aligned_cols=77 Identities=14% Similarity=0.031 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHH-cCCCCCCce-----EEEcccCccHHHHHHHHHH
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIK-ANIPNEVPA-----SLVNMLCGSGLKSVTLTSR 136 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~-~GLp~~vPa-----~~V~~aCaSGl~Al~~Aa~ 136 (160)
.+-..++++++|+++++.++|||.++.-...... .....+.+... .+.. .+|. ..=|-.++|+...+..+..
T Consensus 144 ~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~as~~~~l~~~~~ 221 (254)
T cd00327 144 GEGLARAARKALEGAGLTPSDIDYVEAHGTGTPI-GDAVELALGLDPDGVR-SPAVSATLIMTGHPLGAAGLAILDELLL 221 (254)
T ss_pred hHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcc-ccHHHHHHHHHHhCCC-CCceeccccccccchHHHHHHHHHHHHH
Confidence 4556789999999999999999988764432211 11122221111 1110 1121 1124567778888888877
Q ss_pred HHHcC
Q psy4156 137 QQVLL 141 (160)
Q Consensus 137 ~I~sG 141 (160)
..+.+
T Consensus 222 ~~~~~ 226 (254)
T cd00327 222 MLEHE 226 (254)
T ss_pred HHhCC
Confidence 77664
No 146
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=85.72 E-value=5 Score=34.42 Aligned_cols=75 Identities=15% Similarity=0.168 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHcCCCccccCceE-EEeeecCCCCCChHHHHHHHcCC-CCCCceEEE-----cccCccHHHHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVI-LGQALTAGQGQNPARQASIKANI-PNEVPASLV-----NMLCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi-~G~~~~~~~g~~~ar~~al~~GL-p~~vPa~~V-----~~aCaSGl~Al~~Aa~~I 138 (160)
..++++++|+++|++|+|||.+. .|+..+..+ ..-.+.+....|- +..+|...+ +-..+||+..+..+..++
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D-~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l 355 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGD-KAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAI 355 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCC-HHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHH
Confidence 56899999999999999999864 233332211 1112222222231 112343222 235778888888888888
Q ss_pred HcC
Q psy4156 139 VLL 141 (160)
Q Consensus 139 ~sG 141 (160)
+.|
T Consensus 356 ~~~ 358 (407)
T TIGR03150 356 RDG 358 (407)
T ss_pred hcC
Confidence 876
No 147
>PRK06158 thiolase; Provisional
Probab=85.50 E-value=1.5 Score=38.05 Aligned_cols=94 Identities=19% Similarity=0.104 Sum_probs=53.2
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC---
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE--- 114 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~--- 114 (160)
++++|.|....--........+... .-...+++++++++||+|+|||.+=+=-. .+...-...+.+|+.+.
T Consensus 229 ~~v~i~g~~~~~~~~~~~~~~~~~~-~~~~~aa~~A~~~AGi~p~DId~~ElyD~-----Fs~~~l~~~E~lG~~~~Ge~ 302 (384)
T PRK06158 229 PPVYVLGAAAATWHRQISSMPDLTV-TAAAESGPRAFAMAGLTPADIDVVELYDA-----FTINTILFLEDLGFCAKGEG 302 (384)
T ss_pred CcEEEEEEEEecCCcccccccchhh-hHHHHHHHHHHHHcCCCHHHCcEEEecCC-----chHHHHHHHHHcCCCCCCcH
Confidence 5799998654321111111122222 22467999999999999999997643111 11122333345565322
Q ss_pred --------------CceEEEc-------cc--CccHHHHHHHHHHHHHc
Q psy4156 115 --------------VPASLVN-------ML--CGSGLKSVTLTSRQQVL 140 (160)
Q Consensus 115 --------------vPa~~V~-------~a--CaSGl~Al~~Aa~~I~s 140 (160)
.| || .+ .++|+.-+..+..+++-
T Consensus 303 ~~~~~~G~~~~~G~~P---vN~sGG~ls~GhpgatG~~~~~E~~~QLrg 348 (384)
T PRK06158 303 GAFVEGGRIAPGGRLP---VNTNGGGLSCVHPGMYGLFLLIEAVRQLRG 348 (384)
T ss_pred HHHHHCCCCccCCCcc---ccCCChhhcCCCCchhhHHHHHHHHHHHcC
Confidence 24 44 22 26788888888888863
No 148
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=85.40 E-value=7.2 Score=33.84 Aligned_cols=74 Identities=19% Similarity=0.180 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHcCCCccccCceEE-EeeecCCCCCChHHHHHHHcCCCCCCceEE-----EcccCccHHHHHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVIL-GQALTAGQGQNPARQASIKANIPNEVPASL-----VNMLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~-G~~~~~~~g~~~ar~~al~~GLp~~vPa~~-----V~~aCaSGl~Al~~Aa~~I~ 139 (160)
..++++++|+++|+.|+|||.+.. |+.++... ..-.+.+....| ..+|... =+-.++||+..+..+...++
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D-~~E~~al~~~f~--~~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~ 338 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLND-AMESRAVAAVFG--DGVPCSSTKGLTGHTLGAAGAVEAAICWLALR 338 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCC-HHHHHHHHHHhC--CCCceeCCCcccccChhhcchHHHHHHHHHHh
Confidence 358999999999999999998532 22222111 122233333333 2344322 23578888888888888888
Q ss_pred cCC
Q psy4156 140 LLT 142 (160)
Q Consensus 140 sG~ 142 (160)
.|.
T Consensus 339 ~~~ 341 (392)
T PRK09185 339 HGL 341 (392)
T ss_pred cCC
Confidence 874
No 149
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=85.33 E-value=1.2 Score=36.90 Aligned_cols=44 Identities=11% Similarity=0.131 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE 114 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~ 114 (160)
..++++++|+++|+++++||.++.-+ .....-+.++..+|+|.+
T Consensus 221 ~~~~~~~~l~~~g~~~~di~~~~~h~-----~~~~~~~~~~~~lgi~~~ 264 (318)
T TIGR00747 221 MGDVVEETLEANGLDPEDIDWFVPHQ-----ANLRIIEALAKRLELDMS 264 (318)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHcCCCHH
Confidence 45678889999999999999877422 122356677888899853
No 150
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=83.48 E-value=2 Score=36.67 Aligned_cols=52 Identities=19% Similarity=0.226 Sum_probs=32.6
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEE
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
+.++|.|.....-........+.....-...|++.+|+++|+.++|||.+=+
T Consensus 225 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei 276 (375)
T cd00829 225 RPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAEL 276 (375)
T ss_pred CCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 5788998766532222111111112233457999999999999999997643
No 151
>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues. The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=83.37 E-value=2.1 Score=37.93 Aligned_cols=68 Identities=18% Similarity=0.274 Sum_probs=48.9
Q ss_pred cCCCCCHHHHHHHHHHHHHHHcCCCcc-ccCceEEEeeecCC-CCCC-hHH------HHHHHcCCCCC--CceEEEccc
Q psy4156 56 SLSELKAHDLGSTAIKEVLKRANVLPN-EISEVILGQALTAG-QGQN-PAR------QASIKANIPNE--VPASLVNML 123 (160)
Q Consensus 56 ~~~~~~~~dL~~~A~~~aL~~agI~~~-~ID~vi~G~~~~~~-~g~~-~ar------~~al~~GLp~~--vPa~~V~~a 123 (160)
.|..++..||......+++++++++.+ |+|.|+=.+-.-.+ ..|. .+. .=++.+|.|+. +|.+++++.
T Consensus 61 eLTrEsV~elVrdtl~e~~k~A~l~i~~DL~FVVRSTGVvAgf~speevg~~I~ALA~GCl~AGvPP~kMtp~Ms~~ni 139 (448)
T PF09887_consen 61 ELTRESVAELVRDTLLESHKKAHLDIKKDLDFVVRSTGVVAGFDSPEEVGEFIKALADGCLMAGVPPRKMTPPMSKNNI 139 (448)
T ss_pred cccHHHHHHHHHHHHHHHHHHcCCCccccceEEEeecceeeccCCHHHHHHHHHHHHhhHHhcCCChhhcCCccchhhc
Confidence 356788899999999999999999997 99998766544322 2121 221 23467899864 889988875
No 152
>PRK07937 lipid-transfer protein; Provisional
Probab=83.29 E-value=13 Score=32.22 Aligned_cols=104 Identities=10% Similarity=-0.047 Sum_probs=55.4
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV 115 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v 115 (160)
.++|+|.|..... ........+..+ ..+.+.++++ +|++|+|||.+=+=- ......-...+.+|+....
T Consensus 224 ~~pv~I~g~~~~~-~~~~~~~~d~~~----~~~~~~a~~~aAgi~~~diD~~Ei~D-----~F~~~~l~~~e~lGl~g~~ 293 (352)
T PRK07937 224 ERPAWITGIEHRI-ESPSLGARDLTR----SPSTALAAEAATGGDAGGVDVAELHA-----PFTHQELILREALGLGDKT 293 (352)
T ss_pred CCcEEEEEEEEee-CCcccccccccc----HHHHHHHHHHhcCCCHHHCCEEEEeC-----CChHHHHHHHHHcCCCCCC
Confidence 3579999875531 111000112222 2334455555 599999999763311 1112223344567774334
Q ss_pred ceEEE------cccCccHHHHHHHHHHHHHcCCCcEEEEEe
Q psy4156 116 PASLV------NMLCGSGLKSVTLTSRQQVLLTLHWLGNGA 150 (160)
Q Consensus 116 Pa~~V------~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG 150 (160)
|.-+- +..-+||+.-+..+..+++.+..+..++-+
T Consensus 294 pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~ 334 (352)
T PRK07937 294 KVNPSGGALAANPMFAAGLERIGEAARHIWDGSARRALAHA 334 (352)
T ss_pred CcCCCccchhcCchhHHHHHHHHHHHHHHhccCCCEEEEec
Confidence 42111 112336788888888999877667666543
No 153
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=83.04 E-value=5.8 Score=33.16 Aligned_cols=44 Identities=20% Similarity=0.146 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE 114 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~ 114 (160)
..++++++|+++|+.++|||.++.=+. +...-+.+...+|+|.+
T Consensus 232 ~~~~i~~~L~~~gl~~~did~~~~H~~-----~~~~~~~i~~~l~l~~e 275 (329)
T PRK07204 232 LMKFIDKLLMDAGYTLADIDLIVPHQA-----SGPAMRLIRKKLGVDEE 275 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCC-----CHHHHHHHHHHcCCCHH
Confidence 457889999999999999998765221 22355677788899854
No 154
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=81.60 E-value=4.1 Score=34.00 Aligned_cols=65 Identities=22% Similarity=0.250 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHH
Q psy4156 64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~ 133 (160)
+...++++++|+++|++++|||.++.=+ ....+-+.+...+|+|++.-..++.+--.++...+-.
T Consensus 227 ~~~~~~~~~~L~~~gl~~~did~~~~h~-----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~ 291 (326)
T PRK05963 227 RMMSGASQNVLASAAMTPQDIDRFFPHQ-----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPL 291 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeCC-----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHH
Confidence 3445678899999999999999876511 1234566777888998654334444433344333333
No 155
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=81.36 E-value=13 Score=32.16 Aligned_cols=79 Identities=16% Similarity=0.122 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccCceEE-EeeecCCCCCChHHHHHHHcCC----CCCCceEEEc-----ccCccHHHHHH
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEISEVIL-GQALTAGQGQNPARQASIKANI----PNEVPASLVN-----MLCGSGLKSVT 132 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID~vi~-G~~~~~~~g~~~ar~~al~~GL----p~~vPa~~V~-----~aCaSGl~Al~ 132 (160)
.+-..++++.+|+++|+.|+|||.+.. |+..+... ..-.+.+....|. ...+|...+- -..+||+..+.
T Consensus 278 ~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d-~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~ 356 (424)
T smart00825 278 GPAQARLIRQALARAGVDPADVDYVEAHGTGTPLGD-PIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLI 356 (424)
T ss_pred HHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCC-HHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHH
Confidence 344568999999999999999998643 33322111 1112222222221 0123433332 34677787888
Q ss_pred HHHHHHHcCC
Q psy4156 133 LTSRQQVLLT 142 (160)
Q Consensus 133 ~Aa~~I~sG~ 142 (160)
.+..+++.|.
T Consensus 357 ~~~~~l~~~~ 366 (424)
T smart00825 357 KVVLALRHGT 366 (424)
T ss_pred HHHHHHhCCC
Confidence 8888888874
No 156
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=81.29 E-value=4.4 Score=34.01 Aligned_cols=71 Identities=15% Similarity=0.129 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHH-HHcC
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ-QVLL 141 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~-I~sG 141 (160)
..++++++|+++|++++|||.++.-+ .....-+.++..+|+|.+.-..++.+--.++...+-.+... ++.|
T Consensus 228 ~~~~i~~~L~~~g~~~~did~~~~hq-----~~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g 299 (326)
T CHL00203 228 VPAVIIKCLNALNISIDEVDWFILHQ-----ANKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNN 299 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHHHHhC
Confidence 45578899999999999999876522 12345667888899985433345555544444444444333 3445
No 157
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=81.27 E-value=2 Score=35.72 Aligned_cols=43 Identities=28% Similarity=0.315 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156 67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE 114 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~ 114 (160)
.++++++|+++|++++|||.++.-+. +..+-+.++..+|+|.+
T Consensus 228 ~~~i~~~L~~~g~~~~did~~~~h~~-----~~~~~~~~~~~lg~~~~ 270 (325)
T PRK12879 228 PKGARQVLEKAGLTKDDIDWVIPHQA-----NLRIIESLCEKLGIPME 270 (325)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCCCHH
Confidence 46788999999999999998875321 22355677788899754
No 158
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=80.94 E-value=1.6 Score=34.52 Aligned_cols=32 Identities=16% Similarity=0.308 Sum_probs=26.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCceEEEee
Q psy4156 61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQA 92 (160)
Q Consensus 61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~ 92 (160)
...+.....++++|+++++.++|||.+.++.-
T Consensus 32 ~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~G 63 (202)
T TIGR03725 32 NHSEILLPMIEELLAEAGLSLQDLDAIAVGVG 63 (202)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 34567778999999999999999999888763
No 159
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=80.70 E-value=6.1 Score=33.94 Aligned_cols=79 Identities=11% Similarity=0.064 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC-CceEEEcccCccHHHHHHHHHH-HHHcCCC
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE-VPASLVNMLCGSGLKSVTLTSR-QQVLLTL 143 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~-vPa~~V~~aCaSGl~Al~~Aa~-~I~sG~~ 143 (160)
....++++|+++|++++|||.+++=+ ....+-..+...+|+|.. ++...+++--.++...+-.+.. .+..|..
T Consensus 244 ~~~~i~~~L~~~gl~~~did~~v~HQ-----~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~~~~~~~ 318 (353)
T PRK12880 244 EPKSFKEILEFSKVDEKDIAFHLFHQ-----SNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEF 318 (353)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHHHHcCCc
Confidence 34677899999999999999887521 122355677888899863 4433345555555555444443 3455766
Q ss_pred cEEEEE
Q psy4156 144 HWLGNG 149 (160)
Q Consensus 144 ~vlivg 149 (160)
++++++
T Consensus 319 ~~ll~~ 324 (353)
T PRK12880 319 KASLSA 324 (353)
T ss_pred EEEEEE
Confidence 766655
No 160
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=79.71 E-value=10 Score=31.29 Aligned_cols=77 Identities=14% Similarity=-0.072 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHH-HcCCCCCCceE-----EEcccCccHHHHHHHHHH
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASI-KANIPNEVPAS-----LVNMLCGSGLKSVTLTSR 136 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al-~~GLp~~vPa~-----~V~~aCaSGl~Al~~Aa~ 136 (160)
.+-..++++++|+++++.++|||.++.-...... .....+.... ..+.. +.|.. .=|..++|+...+..+..
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~-~~~~e~~~~~~~~~~~-~~~~~~~~~~~G~~~aas~~~~l~~~~~ 281 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPI-GDVKELKLLRSEFGDK-SPAVSATKAMTGNLSSAAVVLAVDEAVL 281 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCC-CCHHHHHHHHHHhCCC-CceeECCCcccccchhHhHHHHHHHHHH
Confidence 3455689999999999999999988765433221 1112221111 11211 12221 123466788888888887
Q ss_pred HHHcC
Q psy4156 137 QQVLL 141 (160)
Q Consensus 137 ~I~sG 141 (160)
..+.+
T Consensus 282 ~~~~~ 286 (332)
T cd00825 282 MLEHG 286 (332)
T ss_pred HHhcC
Confidence 77766
No 161
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=79.54 E-value=5.3 Score=34.13 Aligned_cols=78 Identities=15% Similarity=0.146 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHcCCCccccCceEE-EeeecCCCCCChHHHHHHHcCC-CCCCceEEE-----cccCccHHHHHHHHHH
Q psy4156 64 DLGSTAIKEVLKRANVLPNEISEVIL-GQALTAGQGQNPARQASIKANI-PNEVPASLV-----NMLCGSGLKSVTLTSR 136 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~ID~vi~-G~~~~~~~g~~~ar~~al~~GL-p~~vPa~~V-----~~aCaSGl~Al~~Aa~ 136 (160)
+-..++++++|++++++++|||.+.. |+..+.. ...-...+....+- ++.+|.... +-.++||+..+..+..
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~-d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~ 353 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPLN-DAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLL 353 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCccc-cHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHH
Confidence 34567899999999999999997643 2222211 11122222222222 113443322 2478999999999999
Q ss_pred HHHcCC
Q psy4156 137 QQVLLT 142 (160)
Q Consensus 137 ~I~sG~ 142 (160)
+++.|.
T Consensus 354 ~l~~~~ 359 (406)
T cd00834 354 ALRDGV 359 (406)
T ss_pred HHhcCC
Confidence 998884
No 162
>PRK04262 hypothetical protein; Provisional
Probab=79.29 E-value=3.6 Score=34.99 Aligned_cols=74 Identities=14% Similarity=0.104 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC-Cce-EEEcc----cCccHHHHHHHHHHH
Q psy4156 64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE-VPA-SLVNM----LCGSGLKSVTLTSRQ 137 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~-vPa-~~V~~----aCaSGl~Al~~Aa~~ 137 (160)
+...++++++|+++|+.++|||.+++=+ ....+-..++..+|+|.+ ++. ..+++ .++|-..++..+.+.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq-----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~ 283 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ-----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDV 283 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC-----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHh
Confidence 4567889999999999999999876521 123355667778899753 332 22333 333334455554444
Q ss_pred HHcCC
Q psy4156 138 QVLLT 142 (160)
Q Consensus 138 I~sG~ 142 (160)
+..|.
T Consensus 284 ~~~Gd 288 (347)
T PRK04262 284 AKPGD 288 (347)
T ss_pred CCCCC
Confidence 44444
No 163
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=79.22 E-value=13 Score=31.16 Aligned_cols=54 Identities=17% Similarity=0.127 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc
Q psy4156 64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM 122 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~ 122 (160)
+...++++++|+++|++++|||.+++-+ .+...-+.+...+|+|.+.--.++++
T Consensus 239 ~~~~~~~~~~L~~~g~~~~did~~i~H~-----~~~~~~~~~~~~lgl~~~k~~~~~~~ 292 (338)
T PRK09258 239 ELAVDTWEAFLAQLGWAVEQVDRVICHQ-----VGAAHTRAILKALGIDPEKVFTTFPT 292 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecCC-----CCHHHHHHHHHHhCCCHHHceehHhh
Confidence 3445678889999999999999876522 12235567777889985432234444
No 164
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=79.18 E-value=9.2 Score=33.04 Aligned_cols=71 Identities=20% Similarity=0.168 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHH-HHcC
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ-QVLL 141 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~-I~sG 141 (160)
..++++++|+++|++++|||.++.-+. ...+-+.++..+|+|.+.-..++.+.-..+...+-.+..+ ++.|
T Consensus 282 ~~~~i~~~L~~~gl~~~dId~~v~Hq~-----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~~~g 353 (379)
T PLN02326 282 VPQVIESALQKAGLTAESIDWLLLHQA-----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVRSG 353 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHHHcC
Confidence 345778889999999999998765221 2234566788899986432345666555555554444443 3444
No 165
>PRK06840 hypothetical protein; Validated
Probab=78.96 E-value=6 Score=33.25 Aligned_cols=43 Identities=12% Similarity=0.147 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCC
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPN 113 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~ 113 (160)
..++++++|+++|+.++|||.++.-+. ...+-+.++..+|+|.
T Consensus 239 ~~~~i~~~L~~~gl~~~did~~~~h~~-----~~~~~~~~~~~Lgl~~ 281 (339)
T PRK06840 239 FLKVIREALRKSGYTPKDIDYLAILHM-----KRSAHIALLEGLGLTE 281 (339)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCc-----CHHHHHHHHHHcCCCH
Confidence 457888999999999999998764221 2234466778889984
No 166
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=78.88 E-value=3.1 Score=36.35 Aligned_cols=49 Identities=12% Similarity=0.095 Sum_probs=30.4
Q ss_pred CceEEEeeeec-cccccCccCCCCCHHHH--HHHHHHHHHHHcCCC--ccccCce
Q psy4156 38 NDVVIVSAART-PIGSFLGSLSELKAHDL--GSTAIKEVLKRANVL--PNEISEV 87 (160)
Q Consensus 38 ~~V~Ivg~~rT-pfg~~~g~~~~~~~~dL--~~~A~~~aL~~agI~--~~~ID~v 87 (160)
++|||.|.+.. ..... ....+.++.++ ...+++.+++++||. ++|||.+
T Consensus 238 ~~v~I~g~~~~~~~~~~-~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~ 291 (398)
T PRK06157 238 DPVYVKALQLAVSNGWE-LQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMA 291 (398)
T ss_pred CCeEEEEEEEecccccc-cccccccccccHHHHHHHHHHHHHcCCCCchhcCCEE
Confidence 57999987543 21110 00012223233 567999999999997 7999975
No 167
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=78.38 E-value=5.8 Score=33.43 Aligned_cols=29 Identities=21% Similarity=0.166 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccCceEEEe
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEISEVILGQ 91 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~ 91 (160)
.+.....++++|++++++++|||.+.++.
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~ 77 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQ 77 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 45667789999999999999999988876
No 168
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=78.23 E-value=3.7 Score=35.64 Aligned_cols=50 Identities=20% Similarity=0.064 Sum_probs=30.8
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceE
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVI 88 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi 88 (160)
++++|.|.+..- ......-.+.....-...+++.+++++|++|+|||.+-
T Consensus 235 ~~v~i~g~~~~~-~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e 284 (389)
T PRK07516 235 RAVRFRARAHVN-DFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVE 284 (389)
T ss_pred CCEEEEEEEecc-CcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 478888865431 11111011211223445799999999999999999763
No 169
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=78.14 E-value=4.7 Score=34.56 Aligned_cols=91 Identities=9% Similarity=-0.125 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCC-CCCCceEE----E-cccCccHHHHHHHHHHH
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANI-PNEVPASL----V-NMLCGSGLKSVTLTSRQ 137 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GL-p~~vPa~~----V-~~aCaSGl~Al~~Aa~~ 137 (160)
=..++++.+|++++++|++||.+.. ..++... ....+..+....|- ....|... + +-..++|.-.+..+...
T Consensus 235 gl~~ai~~AL~~agl~~~dId~v~a-h~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~ 313 (348)
T PRK06147 235 GLTQAIRAALAEAGCGLEDMDYRIA-DLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAA 313 (348)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEc-CCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHH
Confidence 3468999999999999999998653 2221111 11112222222221 11233222 2 23455666666677778
Q ss_pred HHcCC---CcEEEEEeeccccc
Q psy4156 138 QVLLT---LHWLGNGAQYHITA 156 (160)
Q Consensus 138 I~sG~---~~vlivgG~E~mt~ 156 (160)
++.|. ..+++.+..|.=.+
T Consensus 314 ~~~g~~~g~~~L~~s~~d~g~r 335 (348)
T PRK06147 314 SRKGYGPGPNVLCHLSDDDGAR 335 (348)
T ss_pred HHcCcCCCCcEEEEecCCCCce
Confidence 88883 34888777765433
No 170
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=78.05 E-value=4.2 Score=35.14 Aligned_cols=76 Identities=18% Similarity=0.191 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHcCCCccccCceE-EEeeecCCCCCChHHHHHHHcCC-CCCCceEE----E-cccCccHHHHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVI-LGQALTAGQGQNPARQASIKANI-PNEVPASL----V-NMLCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi-~G~~~~~~~g~~~ar~~al~~GL-p~~vPa~~----V-~~aCaSGl~Al~~Aa~~I 138 (160)
..++++++|+++|++|+|||.+. .|+.++..+ ..-.+.+....|- +..+|... + +-.++||+..+..+...+
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d-~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l 356 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGD-KAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAI 356 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCcccc-HHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHH
Confidence 45799999999999999999874 233222211 1112222222231 11344322 2 236778888888888888
Q ss_pred HcCC
Q psy4156 139 VLLT 142 (160)
Q Consensus 139 ~sG~ 142 (160)
+.|.
T Consensus 357 ~~~~ 360 (411)
T PRK07314 357 RDQV 360 (411)
T ss_pred hCCC
Confidence 8874
No 171
>PRK07855 lipid-transfer protein; Provisional
Probab=77.34 E-value=4.1 Score=35.54 Aligned_cols=52 Identities=15% Similarity=0.143 Sum_probs=31.9
Q ss_pred CceEEEeeeeccccccC----ccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEE
Q psy4156 38 NDVVIVSAARTPIGSFL----GSLSELKAHDLGSTAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~----g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
++|||.|.+..--.... ...++.....-...|++.+++++|+.|+|||.+=+
T Consensus 236 ~pv~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El 291 (386)
T PRK07855 236 RPAVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAIL 291 (386)
T ss_pred CCEEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEe
Confidence 57999987542110100 00123333333457999999999999999997633
No 172
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=77.28 E-value=6.7 Score=34.50 Aligned_cols=76 Identities=12% Similarity=-0.027 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCC-CceEEEcccCccHHHHHHHHHHHHHcCC
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNE-VPASLVNMLCGSGLKSVTLTSRQQVLLT 142 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~-vPa~~V~~aCaSGl~Al~~Aa~~I~sG~ 142 (160)
-..++++.+|+++|+ |+|||.|. ++.++... ...-.+.+....+.|.. +-++.=+-..++|+-.+..+...|+.|.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~-ahgtgT~~~D~~E~~Ai~~~f~~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~ 358 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVI-SGATGAHPATAEEKAALEAALAGPVRGIGTLFGHTMEAQFPLGLALAALSVSKGA 358 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEE-eCCCCCCCccHHHHHHHHHHcCCCccccchhhccchHHHHHHHHHHHHHHHhcCc
Confidence 446899999999999 89999854 33222111 11223333333344322 1122223456777777777788888883
No 173
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=77.09 E-value=4.8 Score=35.21 Aligned_cols=95 Identities=15% Similarity=0.048 Sum_probs=53.7
Q ss_pred CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC---
Q psy4156 38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE--- 114 (160)
Q Consensus 38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~--- 114 (160)
++|+|.|.....-... ....+.. ..-...+++.+++++|++|+|||.+=+=-. .+...-...+.+|+.+.
T Consensus 231 ~~v~I~g~~~~~~~~~-~~~~~~~-~~~~~~aa~~a~~~AGi~~~did~~elyD~-----Fs~~~~~~~E~lGl~~~Ge~ 303 (388)
T PRK08142 231 PLVKVLGAGEAIKGQM-GGKVDLT-YSGAAWSGPAAFAEAGVTPADIKYASIYDS-----FTITVLMQLEDLGFCKKGEG 303 (388)
T ss_pred CCEEEEEEEEecCCcc-ccCcccc-cHHHHHHHHHHHHHcCCCHHHCCEEEEecc-----chHHHHHHHHHcCCCCCCch
Confidence 4699999766421111 1112332 234468999999999999999996533111 11122233344555211
Q ss_pred ----------C--ceEEEc----------ccCccHHHHHHHHHHHHH
Q psy4156 115 ----------V--PASLVN----------MLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 115 ----------v--Pa~~V~----------~aCaSGl~Al~~Aa~~I~ 139 (160)
. -.+.|| -..+||+.-+..+..+++
T Consensus 304 ~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLr 350 (388)
T PRK08142 304 GKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLR 350 (388)
T ss_pred HHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHc
Confidence 0 112232 345668888888999987
No 174
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=76.78 E-value=7.9 Score=33.78 Aligned_cols=77 Identities=14% Similarity=0.079 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHcCCCccccCceEE-EeeecCCCCCChHHHHHHHcCCCCCCceEEEc-----ccCccHHHHHHHHHHH
Q psy4156 64 DLGSTAIKEVLKRANVLPNEISEVIL-GQALTAGQGQNPARQASIKANIPNEVPASLVN-----MLCGSGLKSVTLTSRQ 137 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~ID~vi~-G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-----~aCaSGl~Al~~Aa~~ 137 (160)
+=..++++.+|+++|++|++||.|.. |+..+.. ...-.+.+....|- ..+|....- ..+++|+..+..+...
T Consensus 270 ~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~-D~~E~~al~~~fg~-~~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~ 347 (399)
T cd00832 270 PGLARAIRLALADAGLTPEDVDVVFADAAGVPEL-DRAEAAALAAVFGP-RGVPVTAPKTMTGRLYAGGAPLDVATALLA 347 (399)
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCC-CHHHHHHHHHHhCC-CCCceeCCCchhcchHHHHHHHHHHHHHHH
Confidence 33567899999999999999997643 2222211 11222223322332 134433332 3467777777777777
Q ss_pred HHcCC
Q psy4156 138 QVLLT 142 (160)
Q Consensus 138 I~sG~ 142 (160)
++.|.
T Consensus 348 l~~~~ 352 (399)
T cd00832 348 LRDGV 352 (399)
T ss_pred HhCCC
Confidence 87774
No 175
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=76.32 E-value=13 Score=32.01 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHcCCCccccCceEE-EeeecCCCCCChHHHHHHHcCC-CCCCceEEE-----cccCccHHHHHHHHHH
Q psy4156 64 DLGSTAIKEVLKRANVLPNEISEVIL-GQALTAGQGQNPARQASIKANI-PNEVPASLV-----NMLCGSGLKSVTLTSR 136 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~ID~vi~-G~~~~~~~g~~~ar~~al~~GL-p~~vPa~~V-----~~aCaSGl~Al~~Aa~ 136 (160)
+-..++++.+|+++|++|++||.+.. |+..+... ..-.+.+....+- +...|...+ +...+||+..+..+..
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D-~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~ 352 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPAND-VAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQ 352 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCcccc-HHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHH
Confidence 44578999999999999999997643 33222221 1122222222221 112343332 3466777777777777
Q ss_pred HHHcCC
Q psy4156 137 QQVLLT 142 (160)
Q Consensus 137 ~I~sG~ 142 (160)
.++.|.
T Consensus 353 ~l~~~~ 358 (407)
T cd00828 353 SLEHGL 358 (407)
T ss_pred HHhcCc
Confidence 787773
No 176
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=75.25 E-value=7 Score=29.02 Aligned_cols=52 Identities=19% Similarity=0.289 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc
Q psy4156 69 AIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM 122 (160)
Q Consensus 69 A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~ 122 (160)
..++.+++++++++||=.+++... ++-...++|..+-...|+. .+|-+..+.
T Consensus 25 Ll~~ii~~N~l~~edivSv~FT~T-~DL~a~FPA~aaR~~~Gw~-~Vplmc~qE 76 (117)
T TIGR01796 25 LLTELMERNELTPEDLISVIFTVT-EDLHADFPAAAARGLPGWT-DVPVMCAQE 76 (117)
T ss_pred HHHHHHHHcCCCHHHEEEEEEEec-CcccccChHHHHHhccCCC-CcceeccCc
Confidence 344566789999999999888654 4444455665443444985 899876554
No 177
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=75.06 E-value=4.6 Score=36.01 Aligned_cols=94 Identities=16% Similarity=0.073 Sum_probs=52.9
Q ss_pred ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC----
Q psy4156 39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE---- 114 (160)
Q Consensus 39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~---- 114 (160)
.++|.|......... ....+......+..|++.+++++|++|+|||.+=+=-. .....-...+.+|+.+.
T Consensus 285 ~v~i~g~~~~~~~~~-~~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~da-----Fa~~~l~~~e~lGl~~~G~~~ 358 (438)
T PTZ00455 285 LVEIKSLACASGNLY-EDPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEVHDC-----FTIAELLMYEALGIAEYGHAK 358 (438)
T ss_pred cEEEEEEEEecCCcc-cCccccccchHHHHHHHHHHHHcCCCHHHCcEeeeccc-----ChHHHHHHHHHcCCCCCCchH
Confidence 488988765532111 00012222233578999999999999999997633111 11122233455676531
Q ss_pred -------------CceEEEcc--------cCccHHHHHHHHHHHHH
Q psy4156 115 -------------VPASLVNM--------LCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 115 -------------vPa~~V~~--------aCaSGl~Al~~Aa~~I~ 139 (160)
.| ++++. ..+||+.-+..+..+++
T Consensus 359 ~~~~~G~~~~~G~~p-vN~~GG~la~GHP~gAtG~~~v~e~~~QLr 403 (438)
T PTZ00455 359 DLIRNGATALEGRIP-VNTGGGLLSFGHPVGATGVKQIMEVYRQMK 403 (438)
T ss_pred HHHhcCCcccCCCce-eeCCCchhhcCCCcchHHHHHHHHHHHHHh
Confidence 23 22222 35667777777888876
No 178
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=75.05 E-value=21 Score=30.59 Aligned_cols=25 Identities=20% Similarity=0.323 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHcCCCccccCceEE
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
...++++++|+++|++++|||.++.
T Consensus 272 ~~~~~i~~~L~~~gl~~~dId~~~~ 296 (372)
T PRK07515 272 MVAEHIVEHLAENGLTPADVKRFWL 296 (372)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 4678899999999999999998765
No 179
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=74.24 E-value=2.5 Score=36.44 Aligned_cols=75 Identities=24% Similarity=0.198 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHH-HHHc
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR-QQVL 140 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~-~I~s 140 (160)
+..+..++++++|++++++++|||.++.-+. ...+-..++.++|+|......++++--.++..++-.|.. .++.
T Consensus 221 av~~~~~~~~~~L~~~~l~~~dId~~vpHQa-----n~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~~~~ 295 (323)
T COG0332 221 AVRAMPKAIEEVLEKAGLTPEDIDWFVPHQA-----NLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEALRE 295 (323)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEccccc-----cHHHHHHHHHHcCCCHHHHhhHHHHhcccccchHHHHHHHHhhh
Confidence 4456778899999999999999998875322 223555778889998778888888766666666655543 3445
Q ss_pred C
Q psy4156 141 L 141 (160)
Q Consensus 141 G 141 (160)
|
T Consensus 296 g 296 (323)
T COG0332 296 G 296 (323)
T ss_pred C
Confidence 5
No 180
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=74.16 E-value=17 Score=31.77 Aligned_cols=72 Identities=19% Similarity=0.215 Sum_probs=42.9
Q ss_pred HHHHHHHHHHcCCCccccCceEE-EeeecCCCCCChHHHHHH-HcCCCCCCceEEE-----cccCccHHHHHHHHHHHHH
Q psy4156 67 STAIKEVLKRANVLPNEISEVIL-GQALTAGQGQNPARQASI-KANIPNEVPASLV-----NMLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~-G~~~~~~~g~~~ar~~al-~~GLp~~vPa~~V-----~~aCaSGl~Al~~Aa~~I~ 139 (160)
.++++.+|+++|++|+|||.+.. |+..+. + ...-.-++ ..+.. .+|.... +-..+||+..+..+..+++
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~hgtgt~~--~-D~~E~~al~~~~~~-~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~ 359 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPHGTGSPL--G-DETELAALFASGLA-HAWINATKSLTGHGLSAAGIVELIATLLQMR 359 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccCCCCCC--C-CHHHHHHHhcCCCC-CCeEECCCcccccCchhhhHHHHHHHHHHHh
Confidence 57999999999999999997633 222221 1 12211122 22322 3443332 3456788888888888888
Q ss_pred cCC
Q psy4156 140 LLT 142 (160)
Q Consensus 140 sG~ 142 (160)
.|.
T Consensus 360 ~~~ 362 (410)
T PRK07103 360 AGF 362 (410)
T ss_pred CCe
Confidence 774
No 181
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=73.49 E-value=2.2 Score=35.41 Aligned_cols=65 Identities=20% Similarity=0.260 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCC----CChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHH
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG----QNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g----~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~ 136 (160)
.+.....++++|++++++++|||.+.++.-=+.+.+ ...|+.++... ++|.+.|+. ++++...+.
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~----~~Pli~v~~-----l~a~a~~~~ 98 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALAL----NIPLIGVSH-----LEAHALSAR 98 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHT----T--EEEEEH-----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHh----CCCeEeecc-----HHHHHHhHh
Confidence 456678899999999999999999888763211111 12334443332 477776654 455554443
No 182
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=72.56 E-value=11 Score=32.82 Aligned_cols=75 Identities=17% Similarity=0.032 Sum_probs=45.2
Q ss_pred HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc--------ccCccHHHHHHHHHHHH
Q psy4156 67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN--------MLCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~--------~aCaSGl~Al~~Aa~~I 138 (160)
..+++.+++++|+.|+|||.+-+-- ..........+.+|++ ..| ++++ -..+||+..+..+..++
T Consensus 289 ~~a~~~a~~~Agi~~~did~~e~~d-----~fa~~~~~~~e~lG~~-~~p-vn~~GG~l~~Ghp~gasG~~~~~e~~~qL 361 (386)
T TIGR01930 289 VPAIPKALKKAGLSISDIDLFEINE-----AFAAQVLACIKELGLD-LEK-VNVNGGAIALGHPLGASGARIVTTLLHEL 361 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCeeehcc-----hhHHHHHHHHHHhCCC-hhh-cCCCCChHhhCCcHHHHHHHHHHHHHHHH
Confidence 5899999999999999999772211 1111122233456663 233 1122 23556888888888888
Q ss_pred HcCCCcEEEE
Q psy4156 139 VLLTLHWLGN 148 (160)
Q Consensus 139 ~sG~~~vliv 148 (160)
+....+..++
T Consensus 362 ~g~~~~~gl~ 371 (386)
T TIGR01930 362 KRRGGRYGLA 371 (386)
T ss_pred HhcCCCEEEE
Confidence 7644455554
No 183
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=72.50 E-value=22 Score=30.60 Aligned_cols=78 Identities=14% Similarity=0.101 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHcCCCccccCceE-EEeeecCCCCCChHHHHHHHcCCCCCCceEEEc----c-cCccHHHHHHHHHHH
Q psy4156 64 DLGSTAIKEVLKRANVLPNEISEVI-LGQALTAGQGQNPARQASIKANIPNEVPASLVN----M-LCGSGLKSVTLTSRQ 137 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~ID~vi-~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~----~-aCaSGl~Al~~Aa~~ 137 (160)
+-..++++.+|+++|++|+|||.+- .|+.++..+ ..-.+.+....|-...+|...+- . ..++|.-.+..+...
T Consensus 206 ~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D-~~E~~Ai~~~fg~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~ 284 (342)
T PRK14691 206 DGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGD-LGEINAIKHLFGESNALAITSTKSATGHLLGAAGGLETIFTVLA 284 (342)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCC-HHHHHHHHHHhCCCCCceEECCcccccCCcchhhHHHHHHHHHH
Confidence 4456899999999999999999753 233333221 12223333332311134433332 2 445554444445556
Q ss_pred HHcCC
Q psy4156 138 QVLLT 142 (160)
Q Consensus 138 I~sG~ 142 (160)
++.|.
T Consensus 285 l~~~~ 289 (342)
T PRK14691 285 LRDQI 289 (342)
T ss_pred HhCCc
Confidence 77663
No 184
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=72.38 E-value=22 Score=31.05 Aligned_cols=76 Identities=21% Similarity=0.198 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHcCCCccccCceEE-EeeecCCCCCChHHHHHHHcCCCCCCceEEEc-----ccCccHHHHHHHHHHH
Q psy4156 64 DLGSTAIKEVLKRANVLPNEISEVIL-GQALTAGQGQNPARQASIKANIPNEVPASLVN-----MLCGSGLKSVTLTSRQ 137 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~ID~vi~-G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-----~aCaSGl~Al~~Aa~~ 137 (160)
+-..++++++|+++|++|+|||.+.. |+.++..+ ..-.+.+....| ..+|...+- -..++|...+..+...
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D-~~E~~al~~~fg--~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~ 330 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLND-QREANLIQALFP--HRVAVSSTKGATGHTLGASGALGVAFSLLA 330 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCc-HHHHHHHHHHcC--CCCeeecchhhhccChHHHHHHHHHHHHHH
Confidence 34678999999999999999998643 33322211 112222222223 234543333 3556777777777777
Q ss_pred HHcCC
Q psy4156 138 QVLLT 142 (160)
Q Consensus 138 I~sG~ 142 (160)
++.|.
T Consensus 331 l~~~~ 335 (381)
T PRK05952 331 LRHQQ 335 (381)
T ss_pred HhcCc
Confidence 87774
No 185
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=72.20 E-value=22 Score=30.48 Aligned_cols=79 Identities=14% Similarity=0.104 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHcCCCccccCceEE-EeeecCCCCCChHHHHHHHc-CC---CCCCce-----EEEcccCccHHHHHH
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEISEVIL-GQALTAGQGQNPARQASIKA-NI---PNEVPA-----SLVNMLCGSGLKSVT 132 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID~vi~-G~~~~~~~g~~~ar~~al~~-GL---p~~vPa-----~~V~~aCaSGl~Al~ 132 (160)
.+-..++++++|+++|+.++|||.+.. |+..+.... .-.+.+.... +. ...+|. ..=+...+||+..+.
T Consensus 278 ~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~-~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~ 356 (421)
T cd00833 278 GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDP-IEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLI 356 (421)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCH-HHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHH
Confidence 345568999999999999999998743 332222111 1111122111 11 012232 222345677777788
Q ss_pred HHHHHHHcCC
Q psy4156 133 LTSRQQVLLT 142 (160)
Q Consensus 133 ~Aa~~I~sG~ 142 (160)
.+...++.|.
T Consensus 357 ~~~~~l~~~~ 366 (421)
T cd00833 357 KVVLALEHGV 366 (421)
T ss_pred HHHHHHhcCC
Confidence 8888888874
No 186
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=72.09 E-value=8.4 Score=31.69 Aligned_cols=53 Identities=21% Similarity=0.300 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc
Q psy4156 64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN 121 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~ 121 (160)
+...++++++|+++|+.++|||.++.-+. +...-+.+...+|+|.+.-..++.
T Consensus 223 ~~~~~~i~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lgl~~~~~~~~~~ 275 (320)
T cd00830 223 RLMPESIEEALEKAGLTPDDIDWFVPHQA-----NLRIIEAVAKRLGLPEEKVVVNLD 275 (320)
T ss_pred HhhHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCCCHHHhhhhHH
Confidence 34567888999999999999998765322 223455677788997543333343
No 187
>PRK14878 UGMP family protein; Provisional
Probab=71.88 E-value=11 Score=32.20 Aligned_cols=66 Identities=18% Similarity=0.190 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHcCCCccccCceEEEeeecCCCC-C----ChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHH
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQG-Q----NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g-~----~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~ 139 (160)
....+++++|+++|++++|||.+.++.- |...+ - ..|+.++...+ +|...|+. .--|.++.++.
T Consensus 47 ~l~~~i~~~l~~a~~~~~did~Iavt~g-PG~~~~lrvg~~~Ak~la~~~~----~p~~~v~h------~~~Ha~sa~~~ 115 (323)
T PRK14878 47 VAPELLRKALEKAGISIEDIDAVAVSQG-PGLGPALRVGATAARALALKYN----KPLVPVNH------CIAHIEIGRLT 115 (323)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecC-CCcccchHHHHHHHHHHHHHhC----CCccccch------HHHHHHhhhhc
Confidence 3458999999999999999999888653 22111 1 23555555444 55555554 22233444556
Q ss_pred cC
Q psy4156 140 LL 141 (160)
Q Consensus 140 sG 141 (160)
++
T Consensus 116 s~ 117 (323)
T PRK14878 116 TG 117 (323)
T ss_pred CC
Confidence 66
No 188
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=71.60 E-value=7.3 Score=34.15 Aligned_cols=77 Identities=14% Similarity=0.064 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHH-cCCCccccCceEE-EeeecCCCCCChHHHHHHHcCC--CCCCceEEE-----cccCccHHHHHHHHH
Q psy4156 65 LGSTAIKEVLKR-ANVLPNEISEVIL-GQALTAGQGQNPARQASIKANI--PNEVPASLV-----NMLCGSGLKSVTLTS 135 (160)
Q Consensus 65 L~~~A~~~aL~~-agI~~~~ID~vi~-G~~~~~~~g~~~ar~~al~~GL--p~~vPa~~V-----~~aCaSGl~Al~~Aa 135 (160)
-..++++++|++ +|++|+|||.+-. |+..+..+. .-.+.+....|- ++.+|...+ +-..+||+..+..+.
T Consensus 284 ~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~-~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~ 362 (421)
T PTZ00050 284 GARRCMENALKDGANININDVDYVNAHATSTPIGDK-IELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTI 362 (421)
T ss_pred HHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCH-HHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHH
Confidence 356799999999 9999999998633 333222111 111222222221 123443222 245678887888888
Q ss_pred HHHHcCC
Q psy4156 136 RQQVLLT 142 (160)
Q Consensus 136 ~~I~sG~ 142 (160)
..++.|.
T Consensus 363 l~l~~~~ 369 (421)
T PTZ00050 363 LSLYEQI 369 (421)
T ss_pred HHHHcCc
Confidence 8888874
No 189
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=71.07 E-value=6.8 Score=34.36 Aligned_cols=52 Identities=19% Similarity=0.098 Sum_probs=30.6
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCC--ccccCceEE
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVL--PNEISEVIL 89 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~--~~~ID~vi~ 89 (160)
.++++|.|.+..- ........+.....-...|++.+++++||. ++|||.+-+
T Consensus 230 ~~pv~I~g~g~~~-~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei 283 (385)
T PRK06066 230 DDPVWIKGIGWST-ESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEV 283 (385)
T ss_pred CCCEEEEEEEEec-CCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEE
Confidence 3578999865521 000000012222222347999999999997 699997644
No 190
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=71.00 E-value=4.9 Score=33.28 Aligned_cols=44 Identities=23% Similarity=0.283 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE 114 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~ 114 (160)
..++++++|+++|++++|||.++.-+. ....-+.++..+|+|.+
T Consensus 221 ~~~~i~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lg~~~~ 264 (319)
T PRK09352 221 LAKVAREALEAAGLTPEDIDWLVPHQA-----NLRIIDATAKKLGLPME 264 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCCCHH
Confidence 456888999999999999998875321 22355667778899853
No 191
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=70.69 E-value=11 Score=28.00 Aligned_cols=52 Identities=23% Similarity=0.322 Sum_probs=33.7
Q ss_pred HHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc
Q psy4156 69 AIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM 122 (160)
Q Consensus 69 A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~ 122 (160)
..++.+++++++++||-.+++... ++-...++|..+=...|+ +.+|-+..+.
T Consensus 25 Ll~~i~~~N~l~~edivSv~FT~T-~DL~a~FPA~aaR~~~~~-~~Vplmc~qE 76 (117)
T cd02185 25 LLEEIIERNNIKPEDIISVIFTVT-PDLDAAFPAKAARELGGW-KYVPLMCAQE 76 (117)
T ss_pred HHHHHHHHcCCCHHHEEEEEEEeC-CcccccChHHHHHhcCCC-CCcceeecCc
Confidence 344666789999999999888654 444444565443333355 4788776554
No 192
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=70.65 E-value=12 Score=32.77 Aligned_cols=76 Identities=20% Similarity=0.207 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHcCCCccccCce-EEEeeecCCCCCChHHHHHHHcCC--CCCCceEEE-----cccCccHHHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEV-ILGQALTAGQGQNPARQASIKANI--PNEVPASLV-----NMLCGSGLKSVTLTSRQ 137 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~v-i~G~~~~~~~g~~~ar~~al~~GL--p~~vPa~~V-----~~aCaSGl~Al~~Aa~~ 137 (160)
..++++++|+++|++|+|||.+ ..|+.++..+ ..-.+.+....|- ++.+|...+ +...+||+..+..+...
T Consensus 280 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D-~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~ 358 (414)
T PRK08722 280 GALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGD-VAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMS 358 (414)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEccCccCCCCC-HHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHH
Confidence 4678999999999999999976 3344333221 1122222222231 123454333 23467777777777778
Q ss_pred HHcCC
Q psy4156 138 QVLLT 142 (160)
Q Consensus 138 I~sG~ 142 (160)
++.|.
T Consensus 359 l~~~~ 363 (414)
T PRK08722 359 LVDQI 363 (414)
T ss_pred HhcCc
Confidence 88773
No 193
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=70.04 E-value=7.8 Score=33.81 Aligned_cols=70 Identities=13% Similarity=0.025 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC--------------CceEEEc-------ccC
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE--------------VPASLVN-------MLC 124 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~--------------vPa~~V~-------~aC 124 (160)
...|++.+++++|++++|||.+-+=-. .....-...+.+||.+. --.+-|| .+-
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D~-----fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Gh 352 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHDC-----FTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGH 352 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeecc-----chHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCC
Confidence 467999999999999999997643211 11222334455676521 1111233 122
Q ss_pred ---ccHHHHHHHHHHHHHc
Q psy4156 125 ---GSGLKSVTLTSRQQVL 140 (160)
Q Consensus 125 ---aSGl~Al~~Aa~~I~s 140 (160)
+||+.-+..+..+++-
T Consensus 353 p~gatG~~~~~e~~~QLrg 371 (403)
T PRK06289 353 PVGASGVRMLLDAAKQVTG 371 (403)
T ss_pred CccchHHHHHHHHHHHHhc
Confidence 5688888888888874
No 194
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=69.62 E-value=16 Score=32.10 Aligned_cols=69 Identities=14% Similarity=0.054 Sum_probs=40.2
Q ss_pred HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC-CceEEEccc--------CccHHHHHHHHHHH
Q psy4156 67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE-VPASLVNML--------CGSGLKSVTLTSRQ 137 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~-vPa~~V~~a--------CaSGl~Al~~Aa~~ 137 (160)
..+++.+|+++|++|+|||.+-+.-. .........+..|+... .| ++.+.+ -+||+.-+..+..+
T Consensus 300 ~~a~~~al~~Agl~~~DId~~ei~D~-----f~~~~l~~~e~lg~~~~~~p-vN~~GG~la~Ghp~gasG~~~~~e~~~q 373 (401)
T PRK09050 300 APATRKLLARLGLTIDQFDVIELNEA-----FAAQGLAVLRQLGLADDDAR-VNPNGGAIALGHPLGMSGARLVLTALHQ 373 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCccccCcH-----hHHHHHHHHHHcCCCCCCCC-EeCCCchHhcCCchhHHHHHHHHHHHHH
Confidence 57999999999999999998753111 11122333455677422 33 333333 23455556667777
Q ss_pred HHcC
Q psy4156 138 QVLL 141 (160)
Q Consensus 138 I~sG 141 (160)
++-.
T Consensus 374 Lr~~ 377 (401)
T PRK09050 374 LERT 377 (401)
T ss_pred HHhc
Confidence 7643
No 195
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=69.16 E-value=12 Score=32.47 Aligned_cols=76 Identities=13% Similarity=0.063 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHcCCCccccCceE-EEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-----ccCccHHHHHHHHHHHH
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVI-LGQALTAGQGQNPARQASIKANIPNEVPASLVN-----MLCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi-~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-----~aCaSGl~Al~~Aa~~I 138 (160)
-..++++.+|+++|++|+|||.+- .|+.++..+. .-.+.+....|=...+|...+- -..+||+..+..+..++
T Consensus 289 ~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~-~E~~al~~~fg~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l 367 (424)
T PRK06333 289 GARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDL-GEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAIFTILAL 367 (424)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchH-HHHHHHHHHhCCCCCceeECcccchhhhHHHHHHHHHHHHHHHH
Confidence 457899999999999999999863 3333332211 1122222333311124432221 24566666666677788
Q ss_pred HcC
Q psy4156 139 VLL 141 (160)
Q Consensus 139 ~sG 141 (160)
+.|
T Consensus 368 ~~g 370 (424)
T PRK06333 368 RDQ 370 (424)
T ss_pred hcC
Confidence 876
No 196
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=68.41 E-value=16 Score=32.09 Aligned_cols=67 Identities=15% Similarity=0.072 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCCccccCceEEEeeecCCCCCCh--HHHHHHHcCCCCCCceEEEcccC--------ccHHHHHHHHHH
Q psy4156 67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNP--ARQASIKANIPNEVPASLVNMLC--------GSGLKSVTLTSR 136 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~--ar~~al~~GLp~~vPa~~V~~aC--------aSGl~Al~~Aa~ 136 (160)
..|++.+|+++|+.|+|||.+-+. ..+. ........|+..+..-++.+.+. +||+.-+..+..
T Consensus 299 ~~A~~~al~~AGl~~~DID~iei~-------dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~ 371 (400)
T PRK13359 299 APATQKLLARLGMTLDQFDVIELN-------EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALY 371 (400)
T ss_pred HHHHHHHHHHhCCCHHHcCcCccC-------cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHH
Confidence 689999999999999999987521 1222 22233456763222234444442 457777777777
Q ss_pred HHHc
Q psy4156 137 QQVL 140 (160)
Q Consensus 137 ~I~s 140 (160)
+++.
T Consensus 372 qL~~ 375 (400)
T PRK13359 372 QLER 375 (400)
T ss_pred HHhh
Confidence 7765
No 197
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=67.94 E-value=9.2 Score=34.08 Aligned_cols=72 Identities=19% Similarity=0.368 Sum_probs=39.6
Q ss_pred CCCCHHHHHHHHHHH----HHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHH
Q psy4156 58 SELKAHDLGSTAIKE----VLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133 (160)
Q Consensus 58 ~~~~~~dL~~~A~~~----aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~ 133 (160)
+|.+.-.|+-.|+++ +|+++|++++|||.++++-.+ |.++-..-+...||=+..| .++...-|..|+.=
T Consensus 298 ~DIr~~qlAKaAi~aGi~~Ll~~agi~~~di~~v~lAG~F----G~~l~~~~a~~iGLlP~~~---~~kv~~~GN~al~G 370 (412)
T PF14574_consen 298 KDIREFQLAKAAIRAGIEILLEEAGISPEDIDRVYLAGGF----GNYLDPESAIRIGLLPDVP---AEKVRFVGNAALAG 370 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT--GGG--EEEEECSS-----SEEEHHHHHHTTSS--S----GGGEEEEC-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHccEEEEeCcc----cccCCHHHHhhcCCCCCcc---ccCEEEECcHHHHH
Confidence 466666677666665 456899999999999997543 4456667777889832444 33333334444433
Q ss_pred HHH
Q psy4156 134 TSR 136 (160)
Q Consensus 134 Aa~ 136 (160)
|..
T Consensus 371 A~~ 373 (412)
T PF14574_consen 371 ARM 373 (412)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 198
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=67.53 E-value=20 Score=31.20 Aligned_cols=25 Identities=16% Similarity=0.147 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHcCCCccccCceEE
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
-...+++.+|+++|++|+|||.+-+
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei 283 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEI 283 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeee
Confidence 3567899999999999999998754
No 199
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=67.51 E-value=5.7 Score=33.71 Aligned_cols=85 Identities=14% Similarity=-0.011 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCC----ChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHH
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ----NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~----~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~ 137 (160)
-.+.....++++|+++++++++||.+.++.--+.+.+- ..|+.++... ++|...|+ -+.|...+ ..
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~----~~p~~~v~-----h~~aha~~-a~ 118 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALAL----NKPLIGVN-----HLEGHLLA-PF 118 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHh----CCCEEecc-----cHHHHHHh-hh
Confidence 34567788899999999999999998876532111222 2344444443 46666663 34444332 23
Q ss_pred HHc-CC-C--cEEEEEeeccccc
Q psy4156 138 QVL-LT-L--HWLGNGAQYHITA 156 (160)
Q Consensus 138 I~s-G~-~--~vlivgG~E~mt~ 156 (160)
+.+ +. + -++++-|.++.+.
T Consensus 119 ~~s~~~~~~~lvL~vdgg~s~~~ 141 (314)
T TIGR03723 119 LEDKPLEFPFLALLVSGGHTQLV 141 (314)
T ss_pred hccCCCCCCEEEEEEeCCCcEEE
Confidence 445 32 2 2456666565543
No 200
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=66.64 E-value=13 Score=32.61 Aligned_cols=52 Identities=17% Similarity=0.041 Sum_probs=30.7
Q ss_pred CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCc--cccCceEE
Q psy4156 37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLP--NEISEVIL 89 (160)
Q Consensus 37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~--~~ID~vi~ 89 (160)
.+++||.|.+.. .........+.....-...+++.+++++|+++ +|||.+=+
T Consensus 236 ~~~v~I~g~~~~-~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei 289 (392)
T PRK06065 236 DTPVWVEGVGWT-LDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEP 289 (392)
T ss_pred CCCEEEEEEEEe-cCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEe
Confidence 367998887552 11111011122112223579999999999974 99997644
No 201
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=66.22 E-value=4.6 Score=29.92 Aligned_cols=23 Identities=26% Similarity=0.525 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCCCccccCceEE
Q psy4156 67 STAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
..|++++|+++|++++|||.+=+
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei 47 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEI 47 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE
T ss_pred HHHHHHHHHHhCCCccccchhhc
Confidence 57999999999999999997643
No 202
>COG4401 AroH Chorismate mutase [Amino acid transport and metabolism]
Probab=65.94 E-value=9 Score=28.39 Aligned_cols=56 Identities=18% Similarity=0.162 Sum_probs=41.7
Q ss_pred HHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHH
Q psy4156 71 KEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGL 128 (160)
Q Consensus 71 ~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl 128 (160)
+...+++-.+|+++-.+++.- .++-...++|..+-...|+. .+|.+.++..|--|.
T Consensus 29 ~~i~~~N~~~pedv~sv~~sv-T~Dl~A~FPAka~R~~~gw~-~Vpv~~~Qem~V~gs 84 (125)
T COG4401 29 EEIEEENITDPEDVVSVILSV-TEDLDAIFPAKAVRELPGWE-YVPVMCMQEMPVPGS 84 (125)
T ss_pred HHHHHhcCCChhheeeEEEEe-ccchhhhCcHHHhccCCCCc-ccceeeeeeccCCCC
Confidence 344456789999998888854 45545566777777788996 899999999886553
No 203
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=64.67 E-value=19 Score=33.08 Aligned_cols=76 Identities=12% Similarity=0.029 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCCccccCceE-EEeeecCCCCCChHHHHHHHcCCCCCCceEEE-----cccCccHHHHHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVI-LGQALTAGQGQNPARQASIKANIPNEVPASLV-----NMLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi-~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V-----~~aCaSGl~Al~~Aa~~I~ 139 (160)
..++++.+|+++|++|++||.|- .|+.++.++. .-.+.+....|-...+|...+ +-.+++|...+..+...|+
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~-~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~ 485 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDL-KEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIR 485 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCH-HHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHh
Confidence 35789999999999999999763 3443332221 112222222231112343222 2356677777777777888
Q ss_pred cCC
Q psy4156 140 LLT 142 (160)
Q Consensus 140 sG~ 142 (160)
.|.
T Consensus 486 ~g~ 488 (540)
T PLN02787 486 TGW 488 (540)
T ss_pred cCC
Confidence 874
No 204
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=64.66 E-value=19 Score=26.70 Aligned_cols=59 Identities=19% Similarity=0.293 Sum_probs=33.5
Q ss_pred CHHHHH---HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc
Q psy4156 61 KAHDLG---STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN 121 (160)
Q Consensus 61 ~~~dL~---~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~ 121 (160)
+++++. .+..++.+++++++++||=.+++... ++-...++|..+=...|+. .+|-+..+
T Consensus 14 ~~e~I~~at~eLl~~i~~~N~l~~~dIvSi~FT~T-~DL~a~fPA~a~R~~~g~~-~Vpl~c~~ 75 (118)
T PF07736_consen 14 TPEEILEATRELLEEILERNELSPEDIVSIIFTVT-PDLDAAFPAAAARELPGWD-DVPLMCAQ 75 (118)
T ss_dssp SHHHHHHHHHHHHHHHHHHTT--GGGEEEEEEEE--TT--SS-TCHHHHHTTTGT-TSEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC-CCcCccChHHHHHccCCCC-ccceeccC
Confidence 444443 33445666789999999999888654 5544445554333334885 79977544
No 205
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=64.46 E-value=13 Score=32.75 Aligned_cols=76 Identities=16% Similarity=0.109 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHcCCCccccCceEE-EeeecCCCCCChHHHHHHHcCC-CCCCceEEEc-----ccCccHHHHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVIL-GQALTAGQGQNPARQASIKANI-PNEVPASLVN-----MLCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~-G~~~~~~~g~~~ar~~al~~GL-p~~vPa~~V~-----~aCaSGl~Al~~Aa~~I 138 (160)
..++++++|+++|++|+|||.+.. |+..+.. ...-...+....|- ...+|...+- -..+||+..+..+...+
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~-d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l 369 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPEN-DKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTI 369 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcch-HHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHH
Confidence 568899999999999999998754 3322211 11111222222221 1134433222 34667777777777778
Q ss_pred HcCC
Q psy4156 139 VLLT 142 (160)
Q Consensus 139 ~sG~ 142 (160)
+.|.
T Consensus 370 ~~~~ 373 (425)
T PRK06501 370 QTGR 373 (425)
T ss_pred hcCc
Confidence 8774
No 206
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=62.49 E-value=22 Score=31.33 Aligned_cols=66 Identities=18% Similarity=0.099 Sum_probs=39.6
Q ss_pred HHHHHHHHHHcCCCccccCceEEEeeecCCCCCCh--HHHHHHHcCCCC-CCceEEEccc--------CccHHHHHHHHH
Q psy4156 67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNP--ARQASIKANIPN-EVPASLVNML--------CGSGLKSVTLTS 135 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~--ar~~al~~GLp~-~vPa~~V~~a--------CaSGl~Al~~Aa 135 (160)
..+++.+|+++|++|+|||.+=+. ..+. ........|+.. ..| ++.+.+ -+||+.-+..+.
T Consensus 299 ~~a~~~al~~Agl~~~DID~~ei~-------D~f~~~~l~~~e~lG~~~~~~p-vN~~GG~la~GHp~gasG~~~~~e~~ 370 (400)
T TIGR02430 299 VPATQKLLARAGLSIDQFDVIELN-------EAFAAQALAVLRELGLADDDAR-VNPNGGAIALGHPLGASGARLVLTAL 370 (400)
T ss_pred HHHHHHHHHHhCCCHHHCCCcccC-------cHHHHHHHHHHHHcCCCCCCCe-ECCCCchHhccChHHHHHHHHHHHHH
Confidence 578999999999999999986521 1222 233344567732 233 333322 235556666677
Q ss_pred HHHHc
Q psy4156 136 RQQVL 140 (160)
Q Consensus 136 ~~I~s 140 (160)
.+++-
T Consensus 371 ~qLr~ 375 (400)
T TIGR02430 371 RQLER 375 (400)
T ss_pred HHHHh
Confidence 77764
No 207
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=62.46 E-value=6.7 Score=33.28 Aligned_cols=27 Identities=33% Similarity=0.442 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHcCCCccccCceEEEe
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVILGQ 91 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi~G~ 91 (160)
.....++++|+++|++++|||.|.++.
T Consensus 48 ~l~~~i~~~l~~~~~~~~did~Iavt~ 74 (322)
T TIGR03722 48 VAPKLIKEALEEAGVSLEDIDAVAFSQ 74 (322)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 355669999999999999999988865
No 208
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=62.44 E-value=31 Score=30.20 Aligned_cols=75 Identities=19% Similarity=0.149 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHcCCCccccCceE-EEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-----ccCccHHHHHHHHHHHH
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVI-LGQALTAGQGQNPARQASIKANIPNEVPASLVN-----MLCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi-~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-----~aCaSGl~Al~~Aa~~I 138 (160)
-..++++.+|++++++|+|||.+. .|+.++.++ ..-.+.+....| ..+|...+- -..++|.--+..+...+
T Consensus 276 ~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D-~~E~~Ai~~~fg--~~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l 352 (405)
T PRK09116 276 TMQIAMELALKDAGLAPEDIGYVNAHGTATDRGD-IAESQATAAVFG--ARMPISSLKSYFGHTLGACGALEAWMSIEMM 352 (405)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCC-HHHHHHHHHHhC--CCCeeECcchhhcccHHHHHHHHHHHHHHHH
Confidence 346899999999999999999773 344433221 122233333333 234533332 23556655555666667
Q ss_pred HcCC
Q psy4156 139 VLLT 142 (160)
Q Consensus 139 ~sG~ 142 (160)
+.|.
T Consensus 353 ~~~~ 356 (405)
T PRK09116 353 NEGW 356 (405)
T ss_pred HcCc
Confidence 7763
No 209
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=61.72 E-value=12 Score=32.43 Aligned_cols=69 Identities=19% Similarity=0.160 Sum_probs=40.4
Q ss_pred HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCC---CCceEEE---cccCccHHHHHHHHHHHHHc
Q psy4156 67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPN---EVPASLV---NMLCGSGLKSVTLTSRQQVL 140 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~---~vPa~~V---~~aCaSGl~Al~~Aa~~I~s 140 (160)
..+++.+++++||+|+|||.+-+- + ..........+..|+.. ++-.-.+ +-..+||+.-+..+..+++.
T Consensus 288 ~~a~~~a~~~Agi~~~did~~e~~----d-~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g 362 (386)
T cd00751 288 VPAIPKALKRAGLTLDDIDLIEIN----E-AFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKR 362 (386)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEee----c-hhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHh
Confidence 589999999999999999976431 1 11112222334556531 1111111 13445677777778888774
No 210
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=61.51 E-value=7.5 Score=33.84 Aligned_cols=24 Identities=17% Similarity=0.066 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHcCCCccccCceEE
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
...|++.+++++|+.|+|||.+=+
T Consensus 287 ~~~A~~~al~~Agl~~~DiDv~Ei 310 (388)
T PRK06366 287 PIPATRKLLEKQNKSIDYYDLVEH 310 (388)
T ss_pred HHHHHHHHHHHcCCCHHHcceeec
Confidence 368999999999999999997643
No 211
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=61.35 E-value=13 Score=32.48 Aligned_cols=78 Identities=17% Similarity=0.203 Sum_probs=44.8
Q ss_pred EEEeCc--EEEeeeeehhcccccccccccCCCceEEEeeeecc-ccccCccCCCCCHHHHHHHHHHHHHHHcCC-Ccccc
Q psy4156 9 VIVSGD--VILLTIWFIFVTGFTRSTMVLSDNDVVIVSAARTP-IGSFLGSLSELKAHDLGSTAIKEVLKRANV-LPNEI 84 (160)
Q Consensus 9 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~m~~V~Ivg~~rTp-fg~~~g~~~~~~~~dL~~~A~~~aL~~agI-~~~~I 84 (160)
.+.||- =+|--=|++|.+--...... +..+-.-+|..||+ |.... +-...-.+..+.++++++.++|| +|+|+
T Consensus 77 ~vmSGGTeGvlSPH~tVF~~~~~~~~~~-~~~~~Lavg~a~T~~~~PEe--iGr~aqV~~vA~aV~~aM~~AGI~dpaDV 153 (365)
T PF09663_consen 77 FVMSGGTEGVLSPHATVFARRPADAPPA-PDEKRLAVGVARTRDFLPEE--IGRMAQVEEVAAAVRAAMADAGITDPADV 153 (365)
T ss_pred EEEecCcCcccCCcEEEEEecCccccCC-CCCcceEEEEecCCCCChHH--cCcHHHHHHHHHHHHHHHHHcCCCChhhe
Confidence 455663 34444567776544322222 22456677778885 33110 00112344567789999999999 89988
Q ss_pred CceEE
Q psy4156 85 SEVIL 89 (160)
Q Consensus 85 D~vi~ 89 (160)
-.|-+
T Consensus 154 H~VQv 158 (365)
T PF09663_consen 154 HFVQV 158 (365)
T ss_pred eeEEe
Confidence 76644
No 212
>PRK08256 lipid-transfer protein; Provisional
Probab=61.22 E-value=14 Score=32.07 Aligned_cols=70 Identities=17% Similarity=0.055 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC-----------------CceEEEc------
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE-----------------VPASLVN------ 121 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~-----------------vPa~~V~------ 121 (160)
....+++.+++++|++++|||.+-+=- ..........+.+|+.+. .| ++.+
T Consensus 265 ~~~~a~~~a~~~ag~~~~DiD~~ei~d-----~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~p-vN~~GG~ls~ 338 (391)
T PRK08256 265 MTRAAAQQVYEQAGIGPEDIDVVELHD-----CFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWV-VNPSGGLLSK 338 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeecc-----CCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCee-eCCCCccccC
Confidence 345799999999999999999764311 112233344456787522 13 2222
Q ss_pred --ccCccHHHHHHHHHHHHHc
Q psy4156 122 --MLCGSGLKSVTLTSRQQVL 140 (160)
Q Consensus 122 --~aCaSGl~Al~~Aa~~I~s 140 (160)
-..+||+.-+..++.+++-
T Consensus 339 Ghp~gasG~~~~~e~~~QL~g 359 (391)
T PRK08256 339 GHPLGATGLAQCAELTWQLRG 359 (391)
T ss_pred CCCccHHHHHHHHHHHHHhcC
Confidence 2345688888888888874
No 213
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=59.55 E-value=97 Score=25.36 Aligned_cols=88 Identities=15% Similarity=0.063 Sum_probs=48.9
Q ss_pred EeeeeccccccCccCCCCCHHHHHHHHHHHHHHH-cCCCc-cccCceEEEeeecCC-CCCChHHHHHHH-cCCCCCCceE
Q psy4156 43 VSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKR-ANVLP-NEISEVILGQALTAG-QGQNPARQASIK-ANIPNEVPAS 118 (160)
Q Consensus 43 vg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~-agI~~-~~ID~vi~G~~~~~~-~g~~~ar~~al~-~GLp~~vPa~ 118 (160)
+...|.|+.. ..++++|..... +..+. +-+.+ ..+|.+.+||..... .| ..+..... .+-+ ++|+
T Consensus 36 ~h~sRi~~~~------~vt~e~L~~m~~-~l~~aa~~ll~~a~~dvi~~~cTsgs~~~G--~~~~~~~i~~~~~-g~p~- 104 (239)
T TIGR02990 36 VYVNRIPYAN------PTTPENLRKMQP-RLTEAAALILPDEELDVVAYSCTSASVVIG--DDEVTRAINAAKP-GTPV- 104 (239)
T ss_pred EEEeceeCCC------CCCHHHHHHHhh-hHHHHHHHhcCCCCCCEEEEccchhheecC--HHHHHHHHHhcCC-CCCe-
Confidence 3346666643 356666654442 22222 23434 689999999987654 23 12222211 1222 3443
Q ss_pred EEcccCccHHHHHHHHHHHHHcCCCcEEEEE
Q psy4156 119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNG 149 (160)
Q Consensus 119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivg 149 (160)
.+...|+..|.+.+ |..++.++.
T Consensus 105 ------tt~~~A~~~AL~al--g~~RIalvT 127 (239)
T TIGR02990 105 ------VTPSSAAVDGLAAL--GVRRISLLT 127 (239)
T ss_pred ------eCHHHHHHHHHHHc--CCCEEEEEC
Confidence 45677888888766 777777764
No 214
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=58.54 E-value=18 Score=31.99 Aligned_cols=23 Identities=22% Similarity=0.388 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHcCCCccccCceE
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVI 88 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi 88 (160)
..++++.+|+++||+|+|||.+-
T Consensus 301 ~~~a~~~Al~~Agi~~~dId~ve 323 (437)
T PLN02836 301 AVLAMTRALQQSGLHPNQVDYVN 323 (437)
T ss_pred HHHHHHHHHHHcCCCHhHcCEEE
Confidence 46789999999999999999763
No 215
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=58.53 E-value=13 Score=32.58 Aligned_cols=66 Identities=17% Similarity=0.099 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCCh--HHHHHHHcCCCCCCceEEEc--------ccCccHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNP--ARQASIKANIPNEVPASLVN--------MLCGSGLKSVTLTS 135 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~--ar~~al~~GLp~~vPa~~V~--------~aCaSGl~Al~~Aa 135 (160)
...|++.+++++|++|+|||.+=+- ..+. .....+.+|+. ..| ++++ -.-+||+.-+..++
T Consensus 293 ~~~a~~~al~~agl~~~did~~e~~-------d~f~~~~l~~~e~lg~~-~~p-vN~~GG~la~Ghp~gasG~~~~~~l~ 363 (393)
T PRK08235 293 PGYAINALLEKTGKTVEDIDLFEIN-------EAFAAVALASTEIAGID-PEK-VNVNGGAVALGHPIGASGARIIVTLI 363 (393)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhc-------chhHHHHHHHHHHhCCC-ccc-CCcCCchHHhCCcHHHHHHHHHHHHH
Confidence 4579999999999999999987431 1222 22333456763 222 1222 23455565566666
Q ss_pred HHHHc
Q psy4156 136 RQQVL 140 (160)
Q Consensus 136 ~~I~s 140 (160)
.+++.
T Consensus 364 ~qL~~ 368 (393)
T PRK08235 364 HELKR 368 (393)
T ss_pred HHHHh
Confidence 66653
No 216
>COG4065 Uncharacterized protein conserved in archaea [Function unknown]
Probab=58.06 E-value=16 Score=32.00 Aligned_cols=66 Identities=21% Similarity=0.313 Sum_probs=45.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcc-ccCceEEEeeecCCC-CCC-hHH------HHHHHcCCCCC--CceEEEccc
Q psy4156 58 SELKAHDLGSTAIKEVLKRANVLPN-EISEVILGQALTAGQ-GQN-PAR------QASIKANIPNE--VPASLVNML 123 (160)
Q Consensus 58 ~~~~~~dL~~~A~~~aL~~agI~~~-~ID~vi~G~~~~~~~-g~~-~ar------~~al~~GLp~~--vPa~~V~~a 123 (160)
-.++..||......+.|++++++.+ |++.|+=.+-...+. .|. .+. .=++.+|.|+. +|+++.++-
T Consensus 93 TresVaelVk~tl~eslkkA~l~i~~Dl~FVVRSTGVtAGF~SPEEVGe~I~ALAdGCl~AGvPP~kMtpamske~I 169 (480)
T COG4065 93 TRESVAELVKDTLLESLKKASLDIDTDLHFVVRSTGVTAGFASPEEVGEMIKALADGCLKAGVPPKKMTPAMSKENI 169 (480)
T ss_pred eHHHHHHHHHHHHHHHHHhcCCcccccceEEEeecccccCCCCHHHHHHHHHHHHhhHHhcCCCccccCcccChhhc
Confidence 4566788999999999999999998 898887766544332 221 222 22467888753 788877764
No 217
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=57.94 E-value=22 Score=31.08 Aligned_cols=79 Identities=18% Similarity=0.183 Sum_probs=43.7
Q ss_pred EEEeC--cEEEeeeeehhcccccccccccCCCceEEEeeeecc-ccccCccCCCCCHHHHHHHHHHHHHHHcCC-Ccccc
Q psy4156 9 VIVSG--DVILLTIWFIFVTGFTRSTMVLSDNDVVIVSAARTP-IGSFLGSLSELKAHDLGSTAIKEVLKRANV-LPNEI 84 (160)
Q Consensus 9 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~m~~V~Ivg~~rTp-fg~~~g~~~~~~~~dL~~~A~~~aL~~agI-~~~~I 84 (160)
++.|| +=+|--=|++|-+--...-...+.++-.-+|..+|+ |.... +-...-.++.+.++++++.++|| +|+|+
T Consensus 77 ~vmSGGTeGvlSPH~tvFa~~~~~~~~~~~~~~rLavg~a~T~~~~PEe--iGr~aqV~~vA~aV~~AM~~AGI~dpaDV 154 (366)
T TIGR02714 77 FVMSGGTEGVISPHATIFATVPADDKVTKTDGKRLTVGVAFTRQFLPEE--IGRTAQITETAAAVKRAMRDAGIADPADV 154 (366)
T ss_pred EEEeCCCCcccCceEEEEEeccccccccCCCCCceEEEeecCCCCChHH--cCcHHHHHHHHHHHHHHHHHcCCCChhHe
Confidence 34555 234555577777632211122223456667777885 32110 00112345667889999999999 88887
Q ss_pred CceEE
Q psy4156 85 SEVIL 89 (160)
Q Consensus 85 D~vi~ 89 (160)
-.|=+
T Consensus 155 H~VQv 159 (366)
T TIGR02714 155 HFVQV 159 (366)
T ss_pred eEEEe
Confidence 66543
No 218
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=55.72 E-value=22 Score=30.90 Aligned_cols=48 Identities=17% Similarity=0.079 Sum_probs=28.9
Q ss_pred ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCC--ccccCce
Q psy4156 39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVL--PNEISEV 87 (160)
Q Consensus 39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~--~~~ID~v 87 (160)
.+||.|....- ........+.........+++++++++|+. ++|||.+
T Consensus 231 ~~~I~g~~~~~-~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~ 280 (386)
T PRK08313 231 VAWIHGTAMRT-EPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVA 280 (386)
T ss_pred CeEEEEEEEEe-cCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEE
Confidence 45888876531 010000012122345568999999999997 6999965
No 219
>PRK09051 beta-ketothiolase; Provisional
Probab=54.95 E-value=50 Score=28.87 Aligned_cols=67 Identities=10% Similarity=0.017 Sum_probs=40.5
Q ss_pred HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc--------ccCccHHHHHHHHHHHH
Q psy4156 67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN--------MLCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~--------~aCaSGl~Al~~Aa~~I 138 (160)
..|++.+|+++|++|+|||.+=+- + .............|+. ..| ++.+ -..+||+.-+..+..++
T Consensus 295 ~~a~~~al~~agi~~~did~~ei~----d-~f~~~~~~~~e~lg~~-~~~-vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L 367 (394)
T PRK09051 295 VPATQKALERAGLTVADLDVIEAN----E-AFAAQACAVTRELGLD-PAK-VNPNGSGISLGHPVGATGAIITVKALYEL 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEec----C-ccHHHHHHHHHHhCCC-ccc-cCCCccHHHhcchHHHHHHHHHHHHHHHH
Confidence 678999999999999999977441 1 1111223334556764 222 1222 23556776677777777
Q ss_pred Hc
Q psy4156 139 VL 140 (160)
Q Consensus 139 ~s 140 (160)
+-
T Consensus 368 ~~ 369 (394)
T PRK09051 368 QR 369 (394)
T ss_pred Hh
Confidence 64
No 220
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=54.81 E-value=34 Score=30.48 Aligned_cols=23 Identities=26% Similarity=0.315 Sum_probs=20.5
Q ss_pred HHHHHHHHHHcCCCccccCceEE
Q psy4156 67 STAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
..+++.+|+++|++++|||.+-+
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei 340 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEI 340 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEE
Confidence 47999999999999999998764
No 221
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=54.63 E-value=13 Score=32.46 Aligned_cols=54 Identities=28% Similarity=0.307 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC------CCChHHHHHHHcCCCCCCceEEEcc
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ------GQNPARQASIKANIPNEVPASLVNM 122 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~------g~~~ar~~al~~GLp~~vPa~~V~~ 122 (160)
.+-....++++|+++++++++||.+.+.. +++. |...|+.++... ++|.+-|+.
T Consensus 50 ~~~l~~~i~~~l~~a~~~~~did~Iavt~--GPGl~~~LrVG~~~Ak~LA~a~----~~PligV~H 109 (345)
T PTZ00340 50 REHILSLVKEALEEAKITPSDISLICYTK--GPGMGAPLSVGAVVARTLSLLW----GKPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEec--CCCcHhhHHHHHHHHHHHHHHc----CCCEeecch
Confidence 34556788999999999999999877654 2221 122445555443 466666654
No 222
>COG3925 N-terminal domain of the phosphotransferase system fructose-specific component IIB [Carbohydrate transport and metabolism]
Probab=54.58 E-value=10 Score=27.24 Aligned_cols=32 Identities=34% Similarity=0.370 Sum_probs=22.8
Q ss_pred ccCCceEEEeCcEEEeeeeehhcccccccccccCCCceEEEeeee
Q psy4156 3 LSDNDVVIVSGDVILLTIWFIFVTGFTRSTMVLSDNDVVIVSAAR 47 (160)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~V~Ivg~~r 47 (160)
..|.|.|||-|+.| ||- | .+..++|||.+..|
T Consensus 38 p~dAeLviV~G~si----------pnd-~--~l~GKkv~i~d~~~ 69 (103)
T COG3925 38 PNDAELVIVFGSSI----------PND-S--ALNGKKVWIGDIER 69 (103)
T ss_pred CCcccEEEEecccc----------CCC-c--cccCceEEEecHHH
Confidence 35789999999986 332 3 34467899998554
No 223
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=53.83 E-value=31 Score=30.35 Aligned_cols=75 Identities=12% Similarity=0.056 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHcCCCccccCceE-EEeeecCCCCCChHHHHHHHcCCCCCCceEEE-----cccCccHHHHHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVI-LGQALTAGQGQNPARQASIKANIPNEVPASLV-----NMLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi-~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V-----~~aCaSGl~Al~~Aa~~I~ 139 (160)
..++++.+|+++|++|+|||.+- .|+.++.++ ..-.+.+....|-. ..|...+ +-..+||.-.+..+...++
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D-~~E~~Al~~~fg~~-~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~ 365 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGD-VAEGKAINNALGGH-RPAVYAPKSALGHSVGAVGAVESILTVLALR 365 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCC-HHHHHHHHHHhCCC-CCceeCccccccccHHHHHHHHHHHHHHHHh
Confidence 56899999999999999999762 333332221 12233333333421 2232222 2345566666666666677
Q ss_pred cCC
Q psy4156 140 LLT 142 (160)
Q Consensus 140 sG~ 142 (160)
.|.
T Consensus 366 ~~~ 368 (418)
T PRK07910 366 DGV 368 (418)
T ss_pred cCc
Confidence 663
No 224
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=53.41 E-value=24 Score=31.26 Aligned_cols=25 Identities=28% Similarity=0.352 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHcCCC--ccccCceEE
Q psy4156 65 LGSTAIKEVLKRANVL--PNEISEVIL 89 (160)
Q Consensus 65 L~~~A~~~aL~~agI~--~~~ID~vi~ 89 (160)
-...+++.+++++|++ ++|||.+-+
T Consensus 294 ~~~~a~~~a~~~AGl~~~~~DiD~~Ei 320 (430)
T PRK06365 294 AGRMAAKEAYEMAGITDPLNDLDLIEL 320 (430)
T ss_pred HHHHHHHHHHHHcCCCCCHHHCCEEEe
Confidence 3457999999999997 799997644
No 225
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=53.30 E-value=28 Score=30.95 Aligned_cols=29 Identities=21% Similarity=0.362 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHcCCCccccCceEE-Eeeec
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVIL-GQALT 94 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~-G~~~~ 94 (160)
+.++.+.||+++|+.|++||.+.. |+.++
T Consensus 278 a~~am~~AL~~Agl~~~~idYinaHgTsT~ 307 (412)
T COG0304 278 AIRAMRAALADAGLTPEDIDYINAHGTSTP 307 (412)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCCCccCC
Confidence 458999999999999999998743 44333
No 226
>PLN03169 chalcone synthase family protein; Provisional
Probab=53.12 E-value=45 Score=29.09 Aligned_cols=68 Identities=10% Similarity=0.161 Sum_probs=41.1
Q ss_pred HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC-Cce--EEEcccCccHHHHHHHHHHH
Q psy4156 67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE-VPA--SLVNMLCGSGLKSVTLTSRQ 137 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~-vPa--~~V~~aCaSGl~Al~~Aa~~ 137 (160)
.+.++++|+++|+.++|||.+.+ +..+ .+..+-..+...+|+|.+ .+. ..+.+.-.++...+-.+...
T Consensus 284 ~~~i~~~L~~~gl~~~did~~~~--v~Hq-~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~ 354 (391)
T PLN03169 284 EGFCKKLMKKAGLVEKDYNDLFW--AVHP-GGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEY 354 (391)
T ss_pred HHHHHHHHHHcCCCCCCCCcceE--EecC-CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHH
Confidence 34567888999999999997655 2222 123456677788899854 332 24555555554444444443
No 227
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=51.22 E-value=12 Score=33.71 Aligned_cols=27 Identities=33% Similarity=0.427 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHcCCCccccCceEEEe
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVILGQ 91 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi~G~ 91 (160)
....+++++|+++++++++||.|.++.
T Consensus 51 ~l~~~i~~~l~~~~~~~~~id~iav~~ 77 (535)
T PRK09605 51 AIPKVIKEALEEAGLKPEDIDLVAFSQ 77 (535)
T ss_pred HHHHHHHHHHHHcCCCHhhCCEEEECC
Confidence 344889999999999999999887764
No 228
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=50.79 E-value=11 Score=33.07 Aligned_cols=23 Identities=22% Similarity=0.258 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHcCCCccccCceE
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVI 88 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi 88 (160)
...|++.+|+++|++|+|||.+=
T Consensus 299 ~~~A~~~al~~Agi~~~did~~e 321 (399)
T PRK09052 299 PIEAIPAALKQAGLKQDDLDWIE 321 (399)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEE
Confidence 36899999999999999999775
No 229
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=50.29 E-value=20 Score=31.22 Aligned_cols=53 Identities=23% Similarity=0.288 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CC-----CChHHHHHHHcCCCCCCceEEEcc
Q psy4156 64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QG-----QNPARQASIKANIPNEVPASLVNM 122 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g-----~~~ar~~al~~GLp~~vPa~~V~~ 122 (160)
+-....++++|++++++.+|||.|-+.. +++ -+ ...||.++... ++|.+-||.
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~--gPGL~gaL~VG~~~Ak~LA~a~----~kPli~VnH 110 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTA--GPGLGGALLVGATAAKALALAL----NKPLIPVNH 110 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEec--CCCchhHHHHHHHHHHHHHHHh----CCCEeecch
Confidence 3456788999999999999999876643 223 22 23455555544 466665664
No 230
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=49.50 E-value=12 Score=32.65 Aligned_cols=23 Identities=17% Similarity=0.167 Sum_probs=20.5
Q ss_pred HHHHHHHHHHcCCCccccCceEE
Q psy4156 67 STAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
..|++.+|+++|+.|+|||.+-+
T Consensus 294 ~~a~~~al~~agl~~~dId~~e~ 316 (393)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEA 316 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEe
Confidence 57999999999999999998754
No 231
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=49.22 E-value=11 Score=33.02 Aligned_cols=23 Identities=17% Similarity=0.176 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHcCCCccccCceE
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVI 88 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi 88 (160)
...+++.+|+++|++|+|||.+-
T Consensus 292 ~~~a~~~Al~~AGl~p~DID~~e 314 (392)
T PRK06633 292 PVPASQKALSKAGWSVNDLEVIE 314 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCeee
Confidence 46789999999999999999765
No 232
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=48.92 E-value=12 Score=32.79 Aligned_cols=67 Identities=16% Similarity=0.084 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChH--HHHHHHcCCCCC--CceEEEcc--------cCccHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPA--RQASIKANIPNE--VPASLVNM--------LCGSGLKSVTL 133 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~a--r~~al~~GLp~~--vPa~~V~~--------aCaSGl~Al~~ 133 (160)
...|++.+|+++|+.|+|||.+-+-- .+.. -...+.+|+... -| ++++. ..+||+.-+..
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~d-------~f~~~~l~~~e~lg~~~~~~~~-vN~~GG~la~Ghp~gatG~~~v~e 371 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELNE-------AFAAQVLAVLKEWGFGADDEER-LNVNGSGISLGHPVGATGGRILAT 371 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeecc-------HHHHHHHHHHHHhCcCcccCCC-cCCCCCHHhhCCChhhhHHHHHHH
Confidence 36899999999999999999765311 1222 222344576431 12 23332 34456666666
Q ss_pred HHHHHHc
Q psy4156 134 TSRQQVL 140 (160)
Q Consensus 134 Aa~~I~s 140 (160)
++.+++-
T Consensus 372 ~~~qL~~ 378 (404)
T PRK06205 372 LLRELQR 378 (404)
T ss_pred HHHHHHh
Confidence 7777764
No 233
>KOG1394|consensus
Probab=47.80 E-value=15 Score=32.67 Aligned_cols=22 Identities=32% Similarity=0.465 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHcCCCccccCce
Q psy4156 66 GSTAIKEVLKRANVLPNEISEV 87 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~v 87 (160)
+..+.+.+|+++|+.|+|||.|
T Consensus 303 a~~am~raL~~Agl~pe~i~Yv 324 (440)
T KOG1394|consen 303 AVLAMERALKDAGLSPEDIDYV 324 (440)
T ss_pred HHHHHHHHHHHcCCChhhcCee
Confidence 5668889999999999999986
No 234
>PRK05790 putative acyltransferase; Provisional
Probab=47.69 E-value=14 Score=32.05 Aligned_cols=69 Identities=12% Similarity=0.098 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChH--HHHHHHcCCC---CCCceEEE---cccCccHHHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPA--RQASIKANIP---NEVPASLV---NMLCGSGLKSVTLTSRQ 137 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~a--r~~al~~GLp---~~vPa~~V---~~aCaSGl~Al~~Aa~~ 137 (160)
...+++.+++++|++|+|||.+-+- ..+.. -...+..|+. .++-+-.+ +-..+||..=+..++.+
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~-------d~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~q 365 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEIN-------EAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHE 365 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeC-------cHHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHH
Confidence 3579999999999999999987531 12222 1233445653 11222222 23466777777777788
Q ss_pred HHcC
Q psy4156 138 QVLL 141 (160)
Q Consensus 138 I~sG 141 (160)
++..
T Consensus 366 L~~~ 369 (393)
T PRK05790 366 MKRR 369 (393)
T ss_pred HHhc
Confidence 8753
No 235
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=46.33 E-value=14 Score=32.24 Aligned_cols=25 Identities=28% Similarity=0.149 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHcCCCccccCceEE
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
-...|++.+|+++|++|+|||.+-+
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei 314 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFEL 314 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 3468999999999999999998753
No 236
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=45.94 E-value=12 Score=32.70 Aligned_cols=23 Identities=22% Similarity=0.202 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHcCCCccccCceE
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVI 88 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi 88 (160)
...|++.+|+++|++|+|||.+-
T Consensus 292 ~~~a~~~al~~agl~~~Did~~e 314 (392)
T PRK07108 292 PVFAVPKLLKQAGLKVDDIDLWE 314 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCchH
Confidence 36899999999999999999763
No 237
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=45.45 E-value=14 Score=32.25 Aligned_cols=22 Identities=14% Similarity=0.219 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHcCCCccccCce
Q psy4156 66 GSTAIKEVLKRANVLPNEISEV 87 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~v 87 (160)
...|++.+++++||+++|||.+
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~ 292 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLI 292 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCee
Confidence 4789999999999999999965
No 238
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=44.07 E-value=16 Score=32.09 Aligned_cols=22 Identities=32% Similarity=0.318 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHcCCCccccCce
Q psy4156 66 GSTAIKEVLKRANVLPNEISEV 87 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~v 87 (160)
...+++++++++|++|+|||.+
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ 326 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLV 326 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCee
Confidence 4589999999999999999976
No 239
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=43.86 E-value=1e+02 Score=26.81 Aligned_cols=68 Identities=16% Similarity=0.044 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc--------ccCccHHHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN--------MLCGSGLKSVTLTSRQ 137 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~--------~aCaSGl~Al~~Aa~~ 137 (160)
...+++.+++++|++|+|||.+=+=-. .....-...+..|++. -| ++.+ -..+||+.-+..+..+
T Consensus 287 ~~~a~~~al~~agl~~~did~~ei~d~-----F~~~~l~~~e~lg~~~-~p-vN~~GG~la~Ghp~gatG~~~v~e~~~q 359 (387)
T PRK07850 287 PVQATAKVLEKAGMKIGDIDLVEINEA-----FASVVLSWAQVHEPDM-DK-VNVNGGAIALGHPVGSTGARLITTALHE 359 (387)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeeeccc-----chHHHHHHHHHcCCCC-CC-cCCCCchhhcCCCcchhHHHHHHHHHHH
Confidence 468999999999999999998754111 1111222234566642 12 2222 2445688888888888
Q ss_pred HHc
Q psy4156 138 QVL 140 (160)
Q Consensus 138 I~s 140 (160)
++.
T Consensus 360 L~~ 362 (387)
T PRK07850 360 LER 362 (387)
T ss_pred HHh
Confidence 864
No 240
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=43.68 E-value=16 Score=31.78 Aligned_cols=68 Identities=16% Similarity=0.078 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc--------cCccHHHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM--------LCGSGLKSVTLTSRQ 137 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~--------aCaSGl~Al~~Aa~~ 137 (160)
...+++.+|+++|++|+|||.+=+=. ......-...+.+|+++ -| ++.+. .-+||+.=+..+..+
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d-----~f~~~~l~~~e~lg~~~-~~-vN~~GG~la~Ghp~gatG~~~v~e~~~q 366 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE-----AFAVVVLYAIKELGLDP-ET-VNIKGGAIAIGHPLGATGARIVGTLARQ 366 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc-----cchHHHHHHHHHhCCCc-cc-cCCCCCHHHcCCCccchHHHHHHHHHHH
Confidence 36799999999999999999764311 11112233445578762 33 33332 345555555666666
Q ss_pred HHc
Q psy4156 138 QVL 140 (160)
Q Consensus 138 I~s 140 (160)
++-
T Consensus 367 L~~ 369 (394)
T PRK06445 367 LQI 369 (394)
T ss_pred HHh
Confidence 653
No 241
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=43.30 E-value=16 Score=31.88 Aligned_cols=22 Identities=14% Similarity=0.215 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHcCCCccccCce
Q psy4156 66 GSTAIKEVLKRANVLPNEISEV 87 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~v 87 (160)
...+++.+|+++|++|+|||.+
T Consensus 297 ~~~a~~~al~~agl~~~Did~~ 318 (397)
T PRK06954 297 PVGAIRKLFEKNGWRAAEVDLF 318 (397)
T ss_pred HHHHHHHHHHHcCCCHHHCCEE
Confidence 3679999999999999999977
No 242
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=42.93 E-value=18 Score=31.94 Aligned_cols=24 Identities=13% Similarity=0.137 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHcCCCccccCceEE
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
...|++.+++++|++|+|||.+=+
T Consensus 309 ~~~a~~~al~~aGl~~~did~~ei 332 (426)
T PRK08170 309 PVHAATPLLQRHGLTLEDLDLWEI 332 (426)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEe
Confidence 457999999999999999997644
No 243
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=42.23 E-value=18 Score=31.83 Aligned_cols=23 Identities=26% Similarity=0.336 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHcCCCccccCceE
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVI 88 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi 88 (160)
...+++.+++++|++|+|||.+=
T Consensus 298 ~~~a~~~a~~~agl~~~did~~e 320 (401)
T PRK08131 298 PVEAIKKALARAGLTLDDMDIIE 320 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCeeh
Confidence 46899999999999999999764
No 244
>PLN02287 3-ketoacyl-CoA thiolase
Probab=41.73 E-value=18 Score=32.42 Aligned_cols=66 Identities=17% Similarity=0.115 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHH--HHHcCCCCCCceEEEc--------ccCccHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQA--SIKANIPNEVPASLVN--------MLCGSGLKSVTLTS 135 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~--al~~GLp~~vPa~~V~--------~aCaSGl~Al~~Aa 135 (160)
...|++.+|+++|++|+|||.+=+ ...+....+ .+.+|+. ..| ++++ -.-+||..-+..+.
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei-------~daFa~~~l~~~e~lG~~-~~p-vN~sGG~la~GHp~gAsG~~~v~~l~ 403 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEI-------NEAFASQFVYCCKKLGLD-PEK-VNVNGGAIALGHPLGATGARCVATLL 403 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEe-------cchHHHHHHHHHHHcCCC-ccc-cCCCCcHHhccCcHHHHHHHHHHHHH
Confidence 468999999999999999997732 122322222 2446764 222 1111 23456666666666
Q ss_pred HHHHc
Q psy4156 136 RQQVL 140 (160)
Q Consensus 136 ~~I~s 140 (160)
.+++.
T Consensus 404 ~qL~~ 408 (452)
T PLN02287 404 HEMKR 408 (452)
T ss_pred HHHHh
Confidence 66654
No 245
>KOG1541|consensus
Probab=41.47 E-value=20 Score=30.01 Aligned_cols=30 Identities=27% Similarity=0.457 Sum_probs=23.9
Q ss_pred HHHHHHHcCCCCCCceEEEcccCccHHHHH
Q psy4156 102 ARQASIKANIPNEVPASLVNMLCGSGLKSV 131 (160)
Q Consensus 102 ar~~al~~GLp~~vPa~~V~~aCaSGl~Al 131 (160)
+..+.+.+.||.+.|++-++-+|+||+++=
T Consensus 37 ~eRaLELLalp~~~~~~iLDIGCGsGLSg~ 66 (270)
T KOG1541|consen 37 AERALELLALPGPKSGLILDIGCGSGLSGS 66 (270)
T ss_pred HHHHHHHhhCCCCCCcEEEEeccCCCcchh
Confidence 334556678888899999999999999763
No 246
>PRK06059 lipid-transfer protein; Provisional
Probab=41.08 E-value=22 Score=30.90 Aligned_cols=23 Identities=13% Similarity=0.209 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHcCCCccccCceE
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVI 88 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi 88 (160)
..++++++++++|++++|||.+=
T Consensus 275 ~~~a~~~a~~~agl~~~Did~~E 297 (399)
T PRK06059 275 KDQILDAAYAEAGIGPEDLSLAE 297 (399)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEe
Confidence 45789999999999999999763
No 247
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=40.82 E-value=19 Score=31.34 Aligned_cols=24 Identities=29% Similarity=0.300 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHcCCCccccCceEE
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
...+++.+++++|++|+|||.+=+
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei 305 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFEL 305 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEE
Confidence 357889999999999999997643
No 248
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=40.45 E-value=19 Score=31.72 Aligned_cols=23 Identities=22% Similarity=0.302 Sum_probs=20.4
Q ss_pred HHHHHHHHHHcCCCccccCceEE
Q psy4156 67 STAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
..|++.+|+++|+.++|||.+=+
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei 325 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFEL 325 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEe
Confidence 46999999999999999998754
No 249
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=39.72 E-value=44 Score=25.97 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCceEEEeee
Q psy4156 61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQAL 93 (160)
Q Consensus 61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~ 93 (160)
++.+=..++.++++++.++++++|+.+.+|+..
T Consensus 34 d~~~gi~~al~~l~~~~~~~~~~i~~v~~gTT~ 66 (176)
T PF05378_consen 34 DPAEGILEALDALLEESGIDPSDIDRVRHGTTV 66 (176)
T ss_pred CHHHHHHHHHHhhhcccCCChhhCcEEEeccHH
Confidence 344445677788888889999999999999874
No 250
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=38.91 E-value=21 Score=30.84 Aligned_cols=67 Identities=13% Similarity=0.011 Sum_probs=39.2
Q ss_pred HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc--------cCccHHHHHHHHHHHH
Q psy4156 67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM--------LCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~--------aCaSGl~Al~~Aa~~I 138 (160)
..+++.+++++|+.|+|||.+=+=- ......-...+.+|+. .-| ++.+. ..+||+.-+.....++
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~d-----~Fa~~~~~~~e~lG~~-~~p-vN~~GG~l~~Ghp~gasG~~~~~e~~~qL 355 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEINE-----AFAPVVLAWLKETGAD-PAK-VNPNGGAIALGHPLGATGAKLMTTLLHEL 355 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeecc-----cchHHHHHHHHHhCCC-chh-cCCCcchhhhcCcHHHHHHHHHHHHHHHH
Confidence 4689999999999999999762211 1111222334456775 223 22332 2455666666666777
Q ss_pred Hc
Q psy4156 139 VL 140 (160)
Q Consensus 139 ~s 140 (160)
+.
T Consensus 356 ~~ 357 (382)
T PRK07801 356 ER 357 (382)
T ss_pred Hh
Confidence 64
No 251
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=38.08 E-value=24 Score=25.03 Aligned_cols=30 Identities=17% Similarity=0.112 Sum_probs=17.7
Q ss_pred CccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156 124 CGSGLKSVTLTSRQQVLLTLHWLGNGAQYH 153 (160)
Q Consensus 124 CaSGl~Al~~Aa~~I~sG~~~vlivgG~E~ 153 (160)
|.+|..|-..|...-+.|..++.+.||.|-
T Consensus 67 C~~G~rS~~aa~~L~~~G~~~v~~~GG~~~ 96 (104)
T PRK10287 67 CNAGRQSGQAKEILSEMGYTHAENAGGLKD 96 (104)
T ss_pred eCCChHHHHHHHHHHHcCCCeEEecCCHHH
Confidence 656655555555555566666666666653
No 252
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=37.85 E-value=1.3e+02 Score=33.25 Aligned_cols=75 Identities=12% Similarity=0.061 Sum_probs=44.2
Q ss_pred HHHHHHHHHHcCCCccccCce-EEEeeecCCCCCChHHHHHHHcCC----CCCCceEEE-----cccCccHHHHHHHHHH
Q psy4156 67 STAIKEVLKRANVLPNEISEV-ILGQALTAGQGQNPARQASIKANI----PNEVPASLV-----NMLCGSGLKSVTLTSR 136 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~v-i~G~~~~~~~g~~~ar~~al~~GL----p~~vPa~~V-----~~aCaSGl~Al~~Aa~ 136 (160)
.++++.+++++|++|++||.| .+|+.++.++. .-.+.+....|- ...+|.-.+ +--++||+.++.-+..
T Consensus 318 ~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~-~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~l 396 (2582)
T TIGR02813 318 AKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDV-AEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVL 396 (2582)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCH-HHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHH
Confidence 689999999999999999976 33443333221 111122111111 012332222 2357889999988888
Q ss_pred HHHcCC
Q psy4156 137 QQVLLT 142 (160)
Q Consensus 137 ~I~sG~ 142 (160)
.+..|.
T Consensus 397 al~~~~ 402 (2582)
T TIGR02813 397 ALHHKV 402 (2582)
T ss_pred HHhcCC
Confidence 888773
No 253
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=37.68 E-value=1e+02 Score=26.16 Aligned_cols=45 Identities=9% Similarity=0.102 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHc--CCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156 65 LGSTAIKEVLKRA--NVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE 114 (160)
Q Consensus 65 L~~~A~~~aL~~a--gI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~ 114 (160)
...++++++|+++ ++.++|||..++=+ .+..+-..++..+|+|..
T Consensus 260 ~~~~~i~~~L~~~~~g~~~~did~~~~H~-----~~~~i~~~v~~~lgl~~~ 306 (361)
T cd00831 260 NLERVLRKLLARLGIGLFKLAFDHWCVHP-----GGRAVLDAVEKALGLSPE 306 (361)
T ss_pred HHHHHHHHHhccccCCCccccceEEEECC-----CChHHHHHHHHHcCCCHH
Confidence 4556788889999 99999999776521 122355667788899743
No 254
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=37.24 E-value=1.4e+02 Score=26.39 Aligned_cols=86 Identities=16% Similarity=0.212 Sum_probs=55.7
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCC-CC-CceEE----E-c
Q psy4156 49 PIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIP-NE-VPASL----V-N 121 (160)
Q Consensus 49 pfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp-~~-vPa~~----V-~ 121 (160)
|+-.+.|.++....-+-...|.+..+++.|..|+|.|.+++=. ..+.....++...|.+ +. .|.+. | |
T Consensus 194 ~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~-----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN 268 (377)
T COG3425 194 PYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQ-----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGN 268 (377)
T ss_pred cccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecC-----CCCchHHHHHHHhCccHhhcCccchhhhhcCc
Confidence 3434455556555667788999999999999999999987622 1223555666666654 11 23332 2 3
Q ss_pred ccCccHHHHHHHHHHHHH
Q psy4156 122 MLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 122 ~aCaSGl~Al~~Aa~~I~ 139 (160)
..|+|..-++......-.
T Consensus 269 ~YtgS~~L~Las~L~~a~ 286 (377)
T COG3425 269 TYTGSLLLGLASLLDNAK 286 (377)
T ss_pred ccchhHHHHHHHHHhhcC
Confidence 568888888777666555
No 255
>PRK12342 hypothetical protein; Provisional
Probab=36.80 E-value=88 Score=25.98 Aligned_cols=48 Identities=10% Similarity=0.109 Sum_probs=32.7
Q ss_pred HHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEE
Q psy4156 68 TAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLV 120 (160)
Q Consensus 68 ~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V 120 (160)
.+..+++++-+ .|.|+.|.-..++.....+.+++..+|+|.=..+..+
T Consensus 99 ~~La~~i~~~~-----~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 99 KALAAAIEKIG-----FDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred HHHHHHHHHhC-----CCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 34444555422 7899999888777666788899999999853334333
No 256
>cd01781 AF6_RA_repeat2 Ubiquitin domain of AT-6, second repeat. The AF-6 protein (also known as afadin and canoe) is a multidomain cell junction protein that contains two N-terminal Ras-associating (RA) domains in addition to FHA (forkhead-associated), DIL (class V myosin homology region), and PDZ domains and a proline-rich region. AF6 acts downstream of the Egfr (Epidermal Growth Factor-receptor)/Ras signalling pathway and provides a link from Egfr to cytoskeletal elements.
Probab=36.74 E-value=43 Score=24.14 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecC
Q psy4156 61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTA 95 (160)
Q Consensus 61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~ 95 (160)
+..+-+..++++||++.|++.++.+.-.+..+...
T Consensus 23 t~~~~a~~vV~eALeKygL~~e~p~~Y~LveV~~~ 57 (100)
T cd01781 23 SINDNADRIVGEALEKYGLEKSDPDDYCLVEVSND 57 (100)
T ss_pred cCCccHHHHHHHHHHHhCCCccCccceEEEEEecc
Confidence 34455667888899999999999888888777654
No 257
>KOG2708|consensus
Probab=36.74 E-value=50 Score=27.86 Aligned_cols=27 Identities=19% Similarity=0.204 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHcCCCccccCceEEE
Q psy4156 64 DLGSTAIKEVLKRANVLPNEISEVILG 90 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~ID~vi~G 90 (160)
+-....++.+|+.++++.+|||.+.+-
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icyT 77 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICYT 77 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEc
Confidence 345567889999999999999977653
No 258
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=36.66 E-value=24 Score=30.78 Aligned_cols=22 Identities=27% Similarity=0.291 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCCccccCceE
Q psy4156 67 STAIKEVLKRANVLPNEISEVI 88 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi 88 (160)
..+++.+++++|++|+|||.+=
T Consensus 285 ~~a~~~al~~Agl~~~DId~~E 306 (387)
T PRK08947 285 VPATQKALKRAGLSISDIDVFE 306 (387)
T ss_pred HHHHHHHHHHcCCCHHHCCEEE
Confidence 5788999999999999999764
No 259
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=35.35 E-value=26 Score=30.63 Aligned_cols=51 Identities=16% Similarity=-0.026 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM 122 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~ 122 (160)
-...|++.+++++|++|+|||.+=+=-. .....-...+.+|++ ..| ++.+.
T Consensus 289 ~~~~a~~~a~~~agl~~~Did~~Ei~d~-----Fa~~~l~~~e~lG~~-~~p-vN~~G 339 (390)
T PRK06504 289 APLPATERALKKAGMKIDDIDLYEVNEA-----FASVPLAWLKATGAD-PER-LNVNG 339 (390)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEeccc-----chHHHHHHHHHhCCC-CCC-cCCCC
Confidence 4456999999999999999997633111 111222344567886 334 44444
No 260
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=34.78 E-value=29 Score=30.77 Aligned_cols=25 Identities=12% Similarity=0.137 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHcCCCccccCceEE
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
-...|++.+++++|++|+|||.+=+
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei 334 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEI 334 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 3457999999999999999997644
No 261
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=34.41 E-value=30 Score=24.30 Aligned_cols=30 Identities=17% Similarity=0.075 Sum_probs=18.7
Q ss_pred CccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156 124 CGSGLKSVTLTSRQQVLLTLHWLGNGAQYH 153 (160)
Q Consensus 124 CaSGl~Al~~Aa~~I~sG~~~vlivgG~E~ 153 (160)
|.+|..+-..+....+.|..++-+.||.+-
T Consensus 65 C~~G~rS~~aa~~L~~~G~~~v~~~GG~~~ 94 (101)
T TIGR02981 65 CNAGRQSGMAKDILLDMGYTHAENAGGIKD 94 (101)
T ss_pred eCCCHHHHHHHHHHHHcCCCeEEecCCHHH
Confidence 666666666555555667666666666653
No 262
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=34.23 E-value=54 Score=24.09 Aligned_cols=29 Identities=17% Similarity=0.234 Sum_probs=23.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCceE
Q psy4156 59 ELKAHDLGSTAIKEVLKRANVLPNEISEVI 88 (160)
Q Consensus 59 ~~~~~dL~~~A~~~aL~~agI~~~~ID~vi 88 (160)
+.++++ ..++++++|++.++.++.|+.+-
T Consensus 13 ~~~~e~-i~~ai~~~L~~~~l~~~si~~la 41 (126)
T PRK07027 13 GVPAEQ-IEAAIRAALAQRPLASADVRVVA 41 (126)
T ss_pred CCCHHH-HHHHHHHHHHHcCCCHHHhheeE
Confidence 566655 57899999999999999998753
No 263
>PF06089 Asparaginase_II: L-asparaginase II; InterPro: IPR010349 This family consists of several bacterial L-asparaginase II proteins. L-asparaginase (3.5.1.1 from EC) catalyses the hydrolysis of L-asparagine to L-aspartate and ammonium. Rhizobium etli possesses two asparaginases: asparaginase I, which is thermostable and constitutive, and asparaginase II, which is thermolabile, induced by asparagine and repressed by the carbon source [].
Probab=33.94 E-value=1.5e+02 Score=25.77 Aligned_cols=62 Identities=18% Similarity=0.217 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~ 137 (160)
-.++++..|+++|+++++.. +|...| ....++......|.. . ..+.+.|++=-.++...+..
T Consensus 81 H~~~v~~~L~k~gL~e~~L~---Cg~~~P---~~~~~~~~li~~g~~-p---~~l~~NCSGKHagmLa~c~~ 142 (324)
T PF06089_consen 81 HVEAVRSMLAKAGLSEEDLQ---CGPHWP---LDEEAREALIRAGGK-P---SRLHNNCSGKHAGMLALCVH 142 (324)
T ss_pred HHHHHHHHHHHcCCCHHHcC---CCCCCC---CCHHHHHHHHhCCCC-C---CcccccChhHHHHHHHHHHH
Confidence 35778999999999999764 222111 123566666666654 2 44899999999888877764
No 264
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=33.51 E-value=28 Score=30.31 Aligned_cols=68 Identities=15% Similarity=0.036 Sum_probs=39.0
Q ss_pred HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc----eEEE---cccCccHHHHHHHHHHHHH
Q psy4156 67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP----ASLV---NMLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP----a~~V---~~aCaSGl~Al~~Aa~~I~ 139 (160)
..+++.+++++|++|+|||.+=+--. .........+..|++ .-| +-.+ +-..+||+.-+.....+++
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d~-----f~~~~l~~~e~lg~~-~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINEA-----FSVVALANQKLLGLD-PEKVNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCcH-----HHHHHHHHHHHhCCC-ccccCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 46999999999999999998754111 111222333455763 122 1111 1235566666666666675
Q ss_pred c
Q psy4156 140 L 140 (160)
Q Consensus 140 s 140 (160)
.
T Consensus 368 ~ 368 (394)
T PLN02644 368 S 368 (394)
T ss_pred h
Confidence 3
No 265
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=33.16 E-value=30 Score=30.73 Aligned_cols=23 Identities=22% Similarity=0.252 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCCccccCceEE
Q psy4156 67 STAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
..+++.+++++|++++|||.+=+
T Consensus 314 ~~a~~~al~~Agl~~~Did~~Ei 336 (430)
T TIGR02446 314 SYATPLALQRAGLALSDLTLIDM 336 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEe
Confidence 46889999999999999997643
No 266
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=31.88 E-value=1.3e+02 Score=20.77 Aligned_cols=55 Identities=15% Similarity=0.114 Sum_probs=39.0
Q ss_pred HHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHH
Q psy4156 69 AIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133 (160)
Q Consensus 69 A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~ 133 (160)
.++..|++.|++.+++|-. ..+..-..+....|-+ ++|.+-++..+-+|..-+..
T Consensus 32 ~ak~lL~~~~i~~~~~di~---------~~~~~~~~l~~~tg~~-tvP~vfi~g~~iGG~ddl~~ 86 (97)
T TIGR00365 32 RAVQILKACGVPFAYVNVL---------EDPEIRQGIKEYSNWP-TIPQLYVKGEFVGGCDIIME 86 (97)
T ss_pred HHHHHHHHcCCCEEEEECC---------CCHHHHHHHHHHhCCC-CCCEEEECCEEEeChHHHHH
Confidence 4677788899998877631 1122223344556875 89999999999999888774
No 267
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=31.78 E-value=2.6e+02 Score=24.27 Aligned_cols=76 Identities=14% Similarity=0.013 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHcCCCccccCceE-EEeeecCCCCCChHHHHHHHcCCC-CCCceEE-----EcccCccHHHHHHHHHH
Q psy4156 64 DLGSTAIKEVLKRANVLPNEISEVI-LGQALTAGQGQNPARQASIKANIP-NEVPASL-----VNMLCGSGLKSVTLTSR 136 (160)
Q Consensus 64 dL~~~A~~~aL~~agI~~~~ID~vi-~G~~~~~~~g~~~ar~~al~~GLp-~~vPa~~-----V~~aCaSGl~Al~~Aa~ 136 (160)
+=..++++++|+++++ ++||.+- .|+.++..+. .-.+.+....|-. ...|... =+-..+||+-.+..+..
T Consensus 274 ~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~D~-~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~ 350 (406)
T PRK08439 274 EGPLRAMKAALEMAGN--PKIDYINAHGTSTPYNDK-NETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIM 350 (406)
T ss_pred HHHHHHHHHHHHHcCC--CccCEEEccCCcCCCCCH-HHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHH
Confidence 4456899999999998 7888662 2333332211 1122222222211 1123222 23456777777777777
Q ss_pred HHHcCC
Q psy4156 137 QQVLLT 142 (160)
Q Consensus 137 ~I~sG~ 142 (160)
.++.|.
T Consensus 351 ~l~~~~ 356 (406)
T PRK08439 351 AMRDGI 356 (406)
T ss_pred HHhCCe
Confidence 787773
No 268
>COG3894 Uncharacterized metal-binding protein [General function prediction only]
Probab=31.73 E-value=33 Score=31.78 Aligned_cols=74 Identities=11% Similarity=0.183 Sum_probs=41.8
Q ss_pred CCCHHHHHHHHHHH----HHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHH
Q psy4156 59 ELKAHDLGSTAIKE----VLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLT 134 (160)
Q Consensus 59 ~~~~~dL~~~A~~~----aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~A 134 (160)
|.....++.-|+++ +++++|++.+|||.++++-+++.+ +-..-+...||-+..+. .|-+. |..++..|
T Consensus 465 Di~e~~kAkgAirAG~~tL~~kaGie~eDie~~ymAGAfGty----id~~~A~~iGliPd~~~-kV~q~---GNtslagA 536 (614)
T COG3894 465 DIEEAGKAKGAIRAGHMTLIEKAGIELEDIERIYMAGAFGTY----IDAKKAMVIGLIPDCDL-KVKQI---GNTSLAGA 536 (614)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhhhheeeccccccc----cchhHhheeeccCCcch-hhhhh---ccchHHHH
Confidence 33333445555554 457899999999999997665443 32333445577334444 34443 33444555
Q ss_pred HHHHHc
Q psy4156 135 SRQQVL 140 (160)
Q Consensus 135 a~~I~s 140 (160)
...+.+
T Consensus 537 r~aLls 542 (614)
T COG3894 537 REALLS 542 (614)
T ss_pred HHHHhc
Confidence 554443
No 269
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=31.41 E-value=34 Score=30.22 Aligned_cols=24 Identities=17% Similarity=0.183 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHcCCCccccCceEE
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
...+++.+++++|++++|||.+=+
T Consensus 311 ~~~a~~~al~~AGl~~~DiD~~Ei 334 (428)
T PRK08963 311 PAYATPLALERAGLTLADLTLIDM 334 (428)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE
Confidence 457899999999999999997644
No 270
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=31.19 E-value=49 Score=29.05 Aligned_cols=65 Identities=18% Similarity=0.208 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCce-EEEeeecCC-C-C----CChHHHHHHHcCCCCCCceEEEcccCccH
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISEV-ILGQALTAG-Q-G----QNPARQASIKANIPNEVPASLVNMLCGSG 127 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~v-i~G~~~~~~-~-g----~~~ar~~al~~GLp~~vPa~~V~~aCaSG 127 (160)
..++..+++++.++++++++++||.| ..|...-.. . + .--+..++...|++ .+.-|+....=++|
T Consensus 69 lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~-VV~DFR~~D~a~GG 140 (365)
T PRK09585 69 LGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGIT-VVADFRRRDVAAGG 140 (365)
T ss_pred HHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcC-EEecChHHHHhcCC
Confidence 44577899999999999999999976 334432111 1 0 01235677777886 67667666544444
No 271
>KOG1406|consensus
Probab=29.80 E-value=53 Score=28.30 Aligned_cols=28 Identities=21% Similarity=0.459 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCceEE
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISEVIL 89 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~ 89 (160)
-.||..++++.+.+++|+.|.|||.+=+
T Consensus 270 gfdm~~~aa~~l~aksgltpndvqviel 297 (408)
T KOG1406|consen 270 GFDMTRLAAKRLFAKSGLTPNDVQVIEL 297 (408)
T ss_pred cchHHHHHHHHHHHHcCCCcccceEEEe
Confidence 3578999999999999999999997744
No 272
>PLN03170 chalcone synthase; Provisional
Probab=29.70 E-value=2.1e+02 Score=25.09 Aligned_cols=69 Identities=12% Similarity=0.048 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC-ce--EEEcccCccHHHHHHHHHHHH
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV-PA--SLVNMLCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v-Pa--~~V~~aCaSGl~Al~~Aa~~I 138 (160)
...+.++++|+++|+.++|||..++ .+ .+..+-..+...+|++.+. +. ..+.+.-.++...+-.+....
T Consensus 282 ~i~~~v~~~L~~~gl~~~di~~~v~----Hq-gg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 282 NIERSLEEAFKPLGITDYNSIFWVA----HP-GGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred HHHHHHHHHHHhcCCCccccCeEEe----cC-CcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 3444667778889999998887543 21 1334556777788997543 21 234555555555555555554
No 273
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=29.67 E-value=1.4e+02 Score=24.75 Aligned_cols=38 Identities=11% Similarity=0.176 Sum_probs=25.9
Q ss_pred cCCCCCHHHHHHHH---HHHHHHHcCCCccccCceEEEeeecCC
Q psy4156 56 SLSELKAHDLGSTA---IKEVLKRANVLPNEISEVILGQALTAG 96 (160)
Q Consensus 56 ~~~~~~~~dL~~~A---~~~aL~~agI~~~~ID~vi~G~~~~~~ 96 (160)
.+++.++++|+..- .++|+ -+.-+.+|.+.+||.....
T Consensus 40 pl~~VT~EeL~~M~~~t~~aAl---~Lada~vdvI~Y~CtsgS~ 80 (238)
T COG3473 40 PLKNVTPEELLKMESYTERAAL---ELADAGVDVIVYGCTSGSL 80 (238)
T ss_pred ccccCCHHHHHHHHHHHHHHHH---hcCccccCEEEEeccceee
Confidence 35678999987543 33333 3555668999999987654
No 274
>PF01323 DSBA: DSBA-like thioredoxin domain; InterPro: IPR001853 DSBA is a sub-family of the Thioredoxin family []. The efficient and correct folding of bacterial disulphide bonded proteins in vivo is dependent upon a class of periplasmic oxidoreductase proteins called DsbA, after the Escherichia coli enzyme. The bacterial protein-folding factor DsbA is the most oxidizing of the thioredoxin family. DsbA catalyses disulphide-bond formation during the folding of secreted proteins. The extremely oxidizing nature of DsbA has been proposed to result from either domain motion or stabilising active-site interactions in the reduced form. DsbA's highly oxidizing nature is a result of hydrogen bond, electrostatic and helix-dipole interactions that favour the thiolate over the disulphide at the active site []. In the pathogenic bacterium Vibrio cholerae, the DsbA homologue (TcpG) is responsible for the folding, maturation and secretion of virulence factors. While the overall architecture of TcpG and DsbA is similar and the surface features are retained in TcpG, there are significant differences. For example, the kinked active site helix results from a three-residue loop in DsbA, but is caused by a proline in TcpG (making TcpG more similar to thioredoxin in this respect). Furthermore, the proposed peptide binding groove of TcpG is substantially shortened compared with that of DsbA due to a six-residue deletion. Also, the hydrophobic pocket of TcpG is more shallow and the acidic patch is much less extensive than that of E. coli DsbA [].; GO: 0015035 protein disulfide oxidoreductase activity; PDB: 3GL5_A 3DKS_D 3RPP_C 3RPN_B 1YZX_A 3L9V_C 2IMD_A 2IME_A 2IMF_A 2B3S_B ....
Probab=28.93 E-value=5.8 Score=30.01 Aligned_cols=64 Identities=14% Similarity=0.146 Sum_probs=35.9
Q ss_pred HHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEccc-CccHHHHHHHHHH
Q psy4156 70 IKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNML-CGSGLKSVTLTSR 136 (160)
Q Consensus 70 ~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~a-CaSGl~Al~~Aa~ 136 (160)
+.++++++|+++++++..+-..... ....-....+...|+. ++|++-|+.. .-.|..-+..-.+
T Consensus 126 l~~~~~~~Gld~~~~~~~~~~~~~~--~~~~~~~~~a~~~gv~-GvP~~vv~g~~~~~G~~~~~~l~~ 190 (193)
T PF01323_consen 126 LAEIAEEAGLDPDEFDAALDSPEVK--AALEEDTAEARQLGVF-GVPTFVVNGKYRFFGADRLDELED 190 (193)
T ss_dssp HHHHHHHTT--HHHHHHHHTSHHHH--HHHHHHHHHHHHTTCS-SSSEEEETTTEEEESCSSHHHHHH
T ss_pred HHHHHHHcCCcHHHHHHHhcchHHH--HHHHHHHHHHHHcCCc-ccCEEEECCEEEEECCCCHHHHHH
Confidence 4556778899998887654211000 0001123445677996 9999999876 6666555544333
No 275
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=27.57 E-value=1.6e+02 Score=24.47 Aligned_cols=37 Identities=16% Similarity=0.086 Sum_probs=28.5
Q ss_pred cCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEE
Q psy4156 84 ISEVILGQALTAGQGQNPARQASIKANIPNEVPASLV 120 (160)
Q Consensus 84 ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V 120 (160)
.|.|++|.-..++.....+.+++..+|+|.=..+..+
T Consensus 113 ~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~l 149 (256)
T PRK03359 113 FDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKI 149 (256)
T ss_pred CCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEEE
Confidence 7899999887776666788899999999854445444
No 276
>PLN03173 chalcone synthase; Provisional
Probab=27.42 E-value=2.5e+02 Score=24.62 Aligned_cols=70 Identities=11% Similarity=-0.009 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce---EEEcccCccHHHHHHHHHHHHH
Q psy4156 65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA---SLVNMLCGSGLKSVTLTSRQQV 139 (160)
Q Consensus 65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa---~~V~~aCaSGl~Al~~Aa~~I~ 139 (160)
-..+.++++|+++|+.++|||..++ .+ .+..+-..+...+||+.+.-. ..+.+.-+++...+-.+.....
T Consensus 278 ~~~~~i~~~L~~~gl~~~di~~~v~----Hq-gg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~ 350 (391)
T PLN03173 278 NVEKSLTEAFKPLGISDWNSLFWIA----HP-GGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMR 350 (391)
T ss_pred HHHHHHHHHHHhcCCCccccCeEEE----CC-CcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHH
Confidence 3445667778889999999997543 11 233466677788899754321 2355555555555555544444
No 277
>PF04422 FrhB_FdhB_N: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; InterPro: IPR007516 Coenzyme F420 hydrogenase (1.12.99.1 from EC) reduces the low-potential two-electron acceptor coenzyme F420. This entry contains the N termini of F420 hydrogenase and dehydrogenase beta subunits [, ]. The N terminus of Methanobacterium formicicum formate dehydrogenase beta chain (1.2.1.2 from EC, P06130 from SWISSPROT) is also represented in this entry []. This region is often found in association with the 4Fe-4S binding domain, fer4 (IPR001450 from INTERPRO), and the C terminus IPR007525 from INTERPRO.
Probab=26.22 E-value=1.3e+02 Score=20.29 Aligned_cols=31 Identities=10% Similarity=-0.196 Sum_probs=25.5
Q ss_pred EcccCccHHHHHHHHHHHHHcCCCcEEEEEe
Q psy4156 120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGA 150 (160)
Q Consensus 120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG 150 (160)
+...++||...-.++...++.|..|-+|+.+
T Consensus 13 ir~~~~sGG~vTaLl~~lLe~g~Vd~vv~~~ 43 (82)
T PF04422_consen 13 IREKSQSGGVVTALLAYLLESGLVDGVVVVG 43 (82)
T ss_pred hcccCCcHHHHHHHHHHHHHcCCceEEEEEe
Confidence 4567788888888888999999988888877
No 278
>KOG2707|consensus
Probab=25.85 E-value=92 Score=27.68 Aligned_cols=52 Identities=17% Similarity=0.215 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCC-----CCChHHHHHHHcCCCCCCceEEEcc
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQ-----GQNPARQASIKANIPNEVPASLVNM 122 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-----g~~~ar~~al~~GLp~~vPa~~V~~ 122 (160)
...+++.||+++++.|+|+|++-+-. .|... |-..|+.++...- .|-+-|..
T Consensus 86 i~~~iqral~aa~~~p~dldaIAVT~-gPGl~lsL~vGl~fA~glA~~l~----kPlipVHH 142 (405)
T KOG2707|consen 86 IPRLIQRALDAAGLSPKDLDAIAVTR-GPGLPLSLKVGLSFAKGLAVKLQ----KPLIPVHH 142 (405)
T ss_pred HHHHHHHHHHHcCCCcccceeEEEec-CCCceeehhhhHHHHHHHHHhcc----CCccchhH
Confidence 45678899999999999999876532 23222 2345666665544 44444554
No 279
>PLN02404 6,7-dimethyl-8-ribityllumazine synthase
Probab=25.65 E-value=1.4e+02 Score=22.63 Aligned_cols=28 Identities=21% Similarity=0.042 Sum_probs=19.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCce
Q psy4156 60 LKAHDLGSTAIKEVLKRANVLPNEISEV 87 (160)
Q Consensus 60 ~~~~dL~~~A~~~aL~~agI~~~~ID~v 87 (160)
....+-+.+.+++.|++.|++.++|+-+
T Consensus 19 ~~I~~~Ll~ga~~~l~~~gv~~~~i~v~ 46 (141)
T PLN02404 19 EIITKNLLEGALETFKRYSVKEENIDVV 46 (141)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccceEEE
Confidence 3455666777777788888877766644
No 280
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion]
Probab=25.35 E-value=2e+02 Score=24.02 Aligned_cols=50 Identities=14% Similarity=0.145 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc
Q psy4156 67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN 121 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~ 121 (160)
+.+..+.+++.+ -|.|++|.-..++....++..++.++|+|.-+-...+.
T Consensus 100 a~~Laa~~~~~~-----~~LVl~G~qa~D~~t~qvg~~lAe~Lg~P~~t~v~~i~ 149 (260)
T COG2086 100 AKALAAAVKKIG-----PDLVLTGKQAIDGDTGQVGPLLAELLGWPQVTYVSKIE 149 (260)
T ss_pred HHHHHHHHHhcC-----CCEEEEecccccCCccchHHHHHHHhCCceeeeEEEEE
Confidence 344445555544 34889999877765566888999999999644444443
No 281
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=25.34 E-value=63 Score=27.74 Aligned_cols=33 Identities=36% Similarity=0.490 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCceEEEeeec
Q psy4156 62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALT 94 (160)
Q Consensus 62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~ 94 (160)
+..=...+++++++++|.+|++|+....|-..-
T Consensus 47 A~~ni~~ai~~A~~~aG~~~~~i~~~~agla~a 79 (301)
T COG2971 47 AVRNIKDAIREALDEAGLKPDEIAAIVAGLALA 79 (301)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHhCceeeeeecc
Confidence 334456788899999999999999998887653
No 282
>PRK10824 glutaredoxin-4; Provisional
Probab=25.13 E-value=2e+02 Score=20.89 Aligned_cols=57 Identities=14% Similarity=0.037 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHH
Q psy4156 68 TAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLT 134 (160)
Q Consensus 68 ~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~A 134 (160)
..+++.|+..+++...+|-. . .+.+-..+....|.+ ++|-.-|+.-+-+|..-+...
T Consensus 34 ~~ak~lL~~~~i~~~~idi~------~---d~~~~~~l~~~sg~~-TVPQIFI~G~~IGG~ddl~~l 90 (115)
T PRK10824 34 AQAVQALSACGERFAYVDIL------Q---NPDIRAELPKYANWP-TFPQLWVDGELVGGCDIVIEM 90 (115)
T ss_pred HHHHHHHHHcCCCceEEEec------C---CHHHHHHHHHHhCCC-CCCeEEECCEEEcChHHHHHH
Confidence 35567788888888766521 1 123444555667987 999999999999998877743
No 283
>PF05589 DUF768: Protein of unknown function (DUF768); InterPro: IPR008486 This family consists of several uncharacterised hypothetical proteins from Rhizobium loti (Mesorhizobium loti).
Probab=25.07 E-value=47 Score=22.00 Aligned_cols=27 Identities=22% Similarity=0.350 Sum_probs=18.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCceE
Q psy4156 61 KAHDLGSTAIKEVLKRANVLPNEISEVI 88 (160)
Q Consensus 61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi 88 (160)
+..+|+.+..++| ++.||+.++|+.-+
T Consensus 27 s~~~La~kl~adA-~a~Gi~~~ei~eEv 53 (64)
T PF05589_consen 27 SAAELAEKLFADA-EAAGIPREEIEEEV 53 (64)
T ss_pred hHHHHHHHHHHHH-HHcCCCHHHHHHHh
Confidence 4566666666555 45799999998753
No 284
>cd03022 DsbA_HCCA_Iso DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway. It converts HCCA, a hemiketal formed spontaneously after ring cleavage of 1,2-dihydroxynapthalene by a dioxygenase, into cis-o-hydroxybenzylidenepyruvate (cHBPA). This is the fourth reaction in a six-step pathway that converts napthalene into salicylate. HCCA isomerase is unique to bacteria that degrade polycyclic aromatic compounds. It is closely related to the eukaryotic protein, GSH transferase kappa (GSTK).
Probab=24.81 E-value=31 Score=25.92 Aligned_cols=32 Identities=16% Similarity=0.152 Sum_probs=22.7
Q ss_pred HHHHHcCCCCCCceEEEcccCccHHHHHHHHHH
Q psy4156 104 QASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136 (160)
Q Consensus 104 ~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~ 136 (160)
..+...|+. ++|++-||+.+-.|...+..-..
T Consensus 158 ~~a~~~gi~-gvPtfvv~g~~~~G~~~l~~~~~ 189 (192)
T cd03022 158 EEAIARGVF-GVPTFVVDGEMFWGQDRLDMLEE 189 (192)
T ss_pred HHHHHcCCC-cCCeEEECCeeecccccHHHHHH
Confidence 344567886 89999999887777766665443
No 285
>PRK13410 molecular chaperone DnaK; Provisional
Probab=24.69 E-value=2.1e+02 Score=27.05 Aligned_cols=53 Identities=23% Similarity=0.154 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEccc
Q psy4156 66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNML 123 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~a 123 (160)
..+.++.+|+++|+++++||.|++-- +...-|.+.+.+....|. .|..++|--
T Consensus 311 ~~~~i~~~L~~ag~~~~dId~VvLVG--GssRiP~V~~~l~~~fg~---~~~~~~npd 363 (668)
T PRK13410 311 LLRPVKRALKDAGLSPEDIDEVVLVG--GSTRMPMVQQLVRTLIPR---EPNQNVNPD 363 (668)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEEC--CccccHHHHHHHHHHcCC---CcccCCCCc
Confidence 34556788899999999999987631 111345566666666553 344555544
No 286
>PLN03172 chalcone synthase family protein; Provisional
Probab=24.36 E-value=2.8e+02 Score=24.33 Aligned_cols=67 Identities=12% Similarity=0.050 Sum_probs=40.3
Q ss_pred HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE---EEcccCccHHHHHHHHHHHH
Q psy4156 67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS---LVNMLCGSGLKSVTLTSRQQ 138 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~---~V~~aCaSGl~Al~~Aa~~I 138 (160)
.+.+++.|++.|+..+|||..++ .+ .+..+-..+...+|++++.-.. .+++.-+++...+-.+...+
T Consensus 280 ~~~~~~~L~~~gl~~~di~~~~~----Hq-gg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 280 EKSLVEAFAPIGINDWNSIFWIA----HP-GGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHhhhcCCCccccceEEe----cC-CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 34455677788999888887432 11 2344666788888998643322 35555555555555555554
No 287
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=24.34 E-value=84 Score=22.91 Aligned_cols=29 Identities=24% Similarity=0.308 Sum_probs=20.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCceE
Q psy4156 59 ELKAHDLGSTAIKEVLKRANVLPNEISEVI 88 (160)
Q Consensus 59 ~~~~~dL~~~A~~~aL~~agI~~~~ID~vi 88 (160)
+.++ +...++++++|++.+++++.|+.+.
T Consensus 11 ~~~~-~~i~~ai~~~l~~~~~~~~~i~~ia 39 (121)
T PF01890_consen 11 GAPA-EEIEEAIEQALAEAGLSPRSIAAIA 39 (121)
T ss_dssp S--H-HHHHHHHHHHHHHCT--GGGEEEEE
T ss_pred CCCH-HHHHHHHHHHHHHcCCChhhccEEE
Confidence 5444 5557899999999999999998653
No 288
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=24.29 E-value=2.5e+02 Score=22.88 Aligned_cols=44 Identities=20% Similarity=0.268 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCC-ChHHHHHHHcCCC
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ-NPARQASIKANIP 112 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~-~~ar~~al~~GLp 112 (160)
.+...++++.+|++.+++ ++||.++.-+. .. ..-+.+...+++|
T Consensus 222 ~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~-----~~~~~~~~~~~~l~~~ 266 (324)
T cd00827 222 HKLIAKVVRKALDRAGLS-EDIDYFVPHQP-----NGKKILEAVAKKLGGP 266 (324)
T ss_pred hHHHHHHHHHHHHHcccc-cccceeeccCc-----hHHHHHHHHHHHccch
Confidence 456678888999999999 99996654221 22 3455666777875
No 289
>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1. This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.
Probab=24.27 E-value=56 Score=23.11 Aligned_cols=38 Identities=18% Similarity=0.119 Sum_probs=26.0
Q ss_pred CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEE-EEEeecc
Q psy4156 113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWL-GNGAQYH 153 (160)
Q Consensus 113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vl-ivgG~E~ 153 (160)
...|.+- .|.+|..|-..+....+.|+.++. +.+|.|.
T Consensus 63 ~~~~ivv---~C~~G~rs~~aa~~L~~~G~~~v~~l~gG~~~ 101 (117)
T cd01522 63 KDRPVLL---LCRSGNRSIAAAEAAAQAGFTNVYNVLEGFEG 101 (117)
T ss_pred CCCeEEE---EcCCCccHHHHHHHHHHCCCCeEEECcCceec
Confidence 3455443 477777777777777788887775 7777764
No 290
>PLN02854 3-ketoacyl-CoA synthase
Probab=22.47 E-value=4.4e+02 Score=24.33 Aligned_cols=70 Identities=13% Similarity=0.077 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHcCCCc------cccCceEEEeeecCCCCCChHHHHHHHcCCC---CCCceEEEcccCccHHHHHHHHHH
Q psy4156 66 GSTAIKEVLKRANVLP------NEISEVILGQALTAGQGQNPARQASIKANIP---NEVPASLVNMLCGSGLKSVTLTSR 136 (160)
Q Consensus 66 ~~~A~~~aL~~agI~~------~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp---~~vPa~~V~~aCaSGl~Al~~Aa~ 136 (160)
+...+++.|+++|+.+ ++||..+. .+ .+..+-..++..+|++ .+..-+++++.-.++..++-.+..
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~i----Hq-ggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~ 461 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCI----HA-GGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELA 461 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEE----CC-CCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHH
Confidence 3556778888899987 57776543 11 1233556778888997 344457778888888888777766
Q ss_pred HHHc
Q psy4156 137 QQVL 140 (160)
Q Consensus 137 ~I~s 140 (160)
++..
T Consensus 462 ~~~~ 465 (521)
T PLN02854 462 YTEA 465 (521)
T ss_pred HHHH
Confidence 6653
No 291
>PRK05788 cobalamin biosynthesis protein CbiG; Validated
Probab=20.70 E-value=1.2e+02 Score=26.00 Aligned_cols=30 Identities=17% Similarity=0.417 Sum_probs=24.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCceE
Q psy4156 58 SELKAHDLGSTAIKEVLKRANVLPNEISEVI 88 (160)
Q Consensus 58 ~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi 88 (160)
++.+++++ .++++++|++++++++.|+.+.
T Consensus 203 rg~~~e~i-~~ai~~~L~~~~i~~~~i~~ia 232 (315)
T PRK05788 203 KGVSAEEI-AEAVERALEALNIDPRAVKAIA 232 (315)
T ss_pred CCCCHHHH-HHHHHHHHHHcCCCHHHccEEe
Confidence 35666555 6899999999999999998753
No 292
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=20.42 E-value=90 Score=27.35 Aligned_cols=59 Identities=20% Similarity=0.271 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccCce-EEEeee---cCCCCC-----ChHHHHHHHcCCCCCCceEEEcc
Q psy4156 63 HDLGSTAIKEVLKRANVLPNEISEV-ILGQAL---TAGQGQ-----NPARQASIKANIPNEVPASLVNM 122 (160)
Q Consensus 63 ~dL~~~A~~~aL~~agI~~~~ID~v-i~G~~~---~~~~g~-----~~ar~~al~~GLp~~vPa~~V~~ 122 (160)
.++..+++++.++++++++++||.+ ..|... |..+-+ .-+..++...|++ .+.-|+...
T Consensus 67 g~~~a~av~~~l~~~~i~~~~I~~IgsHGQTv~H~P~~~~~~TlQiG~~~~iA~~tgi~-vV~DFR~~D 134 (364)
T PF03702_consen 67 GELFADAVNQFLKKNGISPSDIDLIGSHGQTVFHRPEGQHPFTLQIGDPAVIAERTGIT-VVSDFRSAD 134 (364)
T ss_dssp HHHHHHHHHHHHHHCT--GGGEEEEEE--EEEEEECCCTTTEEEEES-HHHHHHHHSS--EEE--CHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccccEEEeCCcceecCcCCCCCceEecCCHHHHHHHHCcC-EEeechHHH
Confidence 4567889999999999999999977 345543 211101 1235677777886 566666543
No 293
>PLN03184 chloroplast Hsp70; Provisional
Probab=20.14 E-value=2.6e+02 Score=26.41 Aligned_cols=52 Identities=21% Similarity=0.146 Sum_probs=32.9
Q ss_pred HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEccc
Q psy4156 67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNML 123 (160)
Q Consensus 67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~a 123 (160)
.+.++.+|+++++++++||.|++-- +...-|.+-..+....|. .|...+|.-
T Consensus 349 ~~~i~~~L~~a~~~~~dId~ViLvG--GssriP~V~~~i~~~fg~---~~~~~~npd 400 (673)
T PLN03184 349 KTPVENALRDAKLSFKDIDEVILVG--GSTRIPAVQELVKKLTGK---DPNVTVNPD 400 (673)
T ss_pred HHHHHHHHHHcCCChhHccEEEEEC--CccccHHHHHHHHHHhCC---CcccccCcc
Confidence 3456778899999999999987721 111335566666666554 244555543
Done!