RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy4157
(441 letters)
>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional.
Length = 393
Score = 331 bits (851), Expect = e-111
Identities = 126/215 (58%), Positives = 159/215 (73%), Gaps = 2/215 (0%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH 268
LA AI++GDA +VAGGQE MSQAPHV+ R G K+ D E+ D+M+ DGLTDAF+ H
Sbjct: 97 LAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYH 156
Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAK 327
MGITAEN+A+++ I+R EQDE+A SQ K A + G F +EIVPV I RKGD VVV
Sbjct: 157 MGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDT 216
Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
DE+P+ +TT E+L KLRP F KDGTVTAGNASGINDGAAAV++MS A+ + PLARI
Sbjct: 217 DEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARI 276
Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
V+ + AGV+P +MG GP+PA+ L KAGWS ++
Sbjct: 277 VSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADL 311
Score = 229 bits (587), Expect = 3e-71
Identities = 85/139 (61%), Positives = 105/139 (75%), Gaps = 2/139 (1%)
Query: 1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
MSQAPHV+ R G K+ D E+ D+M+ DGLTDAF+ HMGITAEN+A+++ I+R EQDE
Sbjct: 118 MSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDE 177
Query: 60 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLRPVFQ 118
+A SQ K A + G F +EIVPV I RKGD VVV DE+P+ +T+ ++L KLRP F
Sbjct: 178 FALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFD 237
Query: 119 KDGTVTAGNASGINDGAAA 137
KDGTVTAGNASGINDGAAA
Sbjct: 238 KDGTVTAGNASGINDGAAA 256
Score = 125 bits (317), Expect = 4e-32
Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 144 TRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRA 202
RKGD VVV DE+P+ +TT E+L KLRP F KDGTVTAGNASGINDGAAAV++MS +A
Sbjct: 206 QRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEAKA 265
Query: 203 QARNIQPLARIA 214
+ + PLARI
Sbjct: 266 KELGLTPLARIV 277
>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze
the reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and eukaryotes (cytosol,
microbodies and mitochondria). There are 2 functional
different classes: thiolase-I (3-ketoacyl-CoA thiolase)
and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I
can cleave longer fatty acid molecules and plays an
important role in the beta-oxidative degradation of
fatty acids. Thiolase-II has a high substrate
specificity. Although it can cleave acetoacyl-CoA, its
main function is the synthesis of acetoacyl-CoA from two
molecules of acetyl-CoA, which gives it importance in
several biosynthetic pathways.
Length = 386
Score = 306 bits (787), Expect = e-101
Identities = 110/212 (51%), Positives = 148/212 (69%)
Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
+I +G+A +VAGG E MS+AP+++ D M+ DGLTD F + MGITA
Sbjct: 97 SIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITA 156
Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKA 333
EN+A+K+ ISR EQDE+A +S + A AQE G F +EIVPV + RKG VVV +DE P+
Sbjct: 157 ENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRP 216
Query: 334 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSA 393
+TT+E L KL+P F+KDGTVTAGNASGINDGAAAVLLMS + A+ ++PLARIV + A
Sbjct: 217 DTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVA 276
Query: 394 GVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
GV+P +MG GP+PA+ L +AG + +++
Sbjct: 277 GVDPAIMGIGPVPAIPKALKRAGLTLDDIDLI 308
Score = 204 bits (522), Expect = 1e-61
Identities = 78/159 (49%), Positives = 103/159 (64%), Gaps = 11/159 (6%)
Query: 1 MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY 60
MS+AP+++ D M+ DGLTD F + MGITAEN+A+K+ ISR EQDE+
Sbjct: 114 MSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEF 173
Query: 61 AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKD 120
A +S + A AQE G F +EIVPV + RKG VVV +DE P+ +T+++ L KL+P F+KD
Sbjct: 174 ALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKD 233
Query: 121 GTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKA 159
GTVTAGNASGINDGAAA V++ +E K
Sbjct: 234 GTVTAGNASGINDGAAA-----------VLLMSEEKAKE 261
Score = 119 bits (301), Expect = 6e-30
Identities = 47/70 (67%), Positives = 58/70 (82%)
Query: 144 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
RKG VVV +DE P+ +TT+E L KL+P F+KDGTVTAGNASGINDGAAAVLLMS ++A+
Sbjct: 201 GRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEEKAK 260
Query: 204 ARNIQPLARI 213
++PLARI
Sbjct: 261 ELGLKPLARI 270
>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases. This
model represents a large family of enzymes which
catalyze the thiolysis of a linear fatty acid CoA (or
acetoacetyl-CoA) using a second CoA molecule to produce
acetyl-CoA and a CoA-ester product two carbons shorter
(or, alternatively, the condensation of two molecules of
acetyl-CoA to produce acetoacetyl-CoA and CoA). This
enzyme is also known as "thiolase", "3-ketoacyl-CoA
thiolase", "beta-ketothiolase" and "Fatty oxidation
complex beta subunit". When catalyzing the degradative
reaction on fatty acids the corresponding EC number is
2.3.1.16. The condensation reaction corresponds to
2.3.1.9. Note that the enzymes which catalyze the
condensation are generally not involved in fatty acid
biosynthesis, which is carried out by a decarboxylating
condensation of acetyl and malonyl esters of acyl
carrier proteins. Rather, this activity may produce
acetoacetyl-CoA for pathways such as IPP biosynthesis in
the absence of sufficient fatty acid oxidation [Fatty
acid and phospholipid metabolism, Other].
Length = 386
Score = 272 bits (698), Expect = 7e-88
Identities = 109/214 (50%), Positives = 150/214 (70%), Gaps = 2/214 (0%)
Query: 214 AIKSGDATAIVAGGQECMSQAPHVIN--IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGI 271
I++G+A +VAGG E MS+ P+ + R G+K +AE++D ++ DGL D + + MG+
Sbjct: 96 LIRAGEADVVVAGGVESMSRVPYSVPRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGL 155
Query: 272 TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYP 331
TAEN+AKK+ ISR EQDEYA +S + AKA E G F +EIVPV + RKG VVV+ DE
Sbjct: 156 TAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVVVSSDEGI 215
Query: 332 KANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMS 391
+ NTT+E L KL+P F +GTVTAGN+S +NDGAAA+LLMS + A+ + PLARIV+ +
Sbjct: 216 RPNTTLEKLAKLKPAFDPNGTVTAGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYA 275
Query: 392 SAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
AGV+P +MG GP+PA+ L KAG S ++ F
Sbjct: 276 VAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLF 309
Score = 184 bits (470), Expect = 3e-54
Identities = 72/139 (51%), Positives = 99/139 (71%), Gaps = 2/139 (1%)
Query: 1 MSQAPHVIN--IRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQD 58
MS+ P+ + R G+K +AE++D ++ DGL D + + MG+TAEN+AKK+ ISR EQD
Sbjct: 113 MSRVPYSVPRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGISREEQD 172
Query: 59 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQ 118
EYA +S + AKA E G F +EIVPV + RKG VVV+ DE + NT+++ L KL+P F
Sbjct: 173 EYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVVVSSDEGIRPNTTLEKLAKLKPAFD 232
Query: 119 KDGTVTAGNASGINDGAAA 137
+GTVTAGN+S +NDGAAA
Sbjct: 233 PNGTVTAGNSSPLNDGAAA 251
Score = 102 bits (257), Expect = 4e-24
Identities = 41/69 (59%), Positives = 53/69 (76%)
Query: 145 RKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQA 204
RKG VVV+ DE + NTT+E L KL+P F +GTVTAGN+S +NDGAAA+LLMS ++A+
Sbjct: 203 RKGPVVVSSDEGIRPNTTLEKLAKLKPAFDPNGTVTAGNSSPLNDGAAALLLMSEEKAKE 262
Query: 205 RNIQPLARI 213
+ PLARI
Sbjct: 263 LGLTPLARI 271
>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional.
Length = 394
Score = 267 bits (685), Expect = 7e-86
Identities = 108/205 (52%), Positives = 141/205 (68%), Gaps = 3/205 (1%)
Query: 214 AIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGIT 272
AI GDA + GG E MS+AP+++ R G ++ DA++ D MV L D F IHMG+T
Sbjct: 103 AILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMV-GALHDPFGTIHMGVT 161
Query: 273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPK 332
AEN+A K+ ISR QD A +S + A A GYF ++IVPV I TRKG+VV DE+ +
Sbjct: 162 AENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVR 221
Query: 333 ANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMS 391
A+TT+E L KL+PVF+K+ GTVTAGNASGINDGAAAV+L A+AR ++PLAR+V +
Sbjct: 222 ADTTLEDLAKLKPVFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYA 281
Query: 392 SAGVEPTLMGTGPIPAVNAVLAKAG 416
AGV+P MG GP+PA L +AG
Sbjct: 282 HAGVDPEYMGIGPVPATQKALERAG 306
Score = 189 bits (481), Expect = 1e-55
Identities = 75/139 (53%), Positives = 100/139 (71%), Gaps = 3/139 (2%)
Query: 1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
MS+AP+++ R G ++ DA++ D MV L D F IHMG+TAEN+A K+ ISR QD
Sbjct: 120 MSRAPYLLPAARWGARMGDAKLVDMMV-GALHDPFGTIHMGVTAENVAAKYGISREAQDA 178
Query: 60 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQK 119
A +S + A A GYF ++IVPV I TRKG+VV DE+ +A+T+++ L KL+PVF+K
Sbjct: 179 LALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVFKK 238
Query: 120 D-GTVTAGNASGINDGAAA 137
+ GTVTAGNASGINDGAAA
Sbjct: 239 ENGTVTAGNASGINDGAAA 257
Score = 111 bits (280), Expect = 4e-27
Identities = 45/71 (63%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Query: 144 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKRA 202
TRKG+VV DE+ +A+TT+E L KL+PVF+K+ GTVTAGNASGINDGAAAV+L A
Sbjct: 207 TRKGEVVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTAGNASGINDGAAAVVLAEADAA 266
Query: 203 QARNIQPLARI 213
+AR ++PLAR+
Sbjct: 267 EARGLKPLARL 277
>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 240 bits (613), Expect = 3e-75
Identities = 116/215 (53%), Positives = 152/215 (70%), Gaps = 2/215 (0%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH 268
LA AI+ GDA I+AGGQE MS AP+V+ R G+++ A++ DSM+ DGL DAF++ H
Sbjct: 97 LAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYH 156
Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAK 327
MGITAEN+ +K+ ISR QD +A SQ K A E G FD+EI P++I RKG+ + A
Sbjct: 157 MGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFAT 216
Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
DE P+A TT E+L KL+P F+KDG+VTAGNAS +NDGAAAVLLMS A+A + LA+I
Sbjct: 217 DEQPRAGTTAESLAKLKPAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKI 276
Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
A ++AGV+P +MG GP+ A L KAGWS E+
Sbjct: 277 AAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAEL 311
Score = 161 bits (410), Expect = 2e-45
Identities = 74/139 (53%), Positives = 101/139 (72%), Gaps = 2/139 (1%)
Query: 1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
MS AP+V+ R G+++ A++ DSM+ DGL DAF++ HMGITAEN+ +K+ ISR QD
Sbjct: 118 MSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDA 177
Query: 60 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLRPVFQ 118
+A SQ K A E G FD+EI P++I RKG+ + A DE P+A T+ ++L KL+P F+
Sbjct: 178 FAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFK 237
Query: 119 KDGTVTAGNASGINDGAAA 137
KDG+VTAGNAS +NDGAAA
Sbjct: 238 KDGSVTAGNASSLNDGAAA 256
Score = 92.6 bits (230), Expect = 1e-20
Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 8/113 (7%)
Query: 145 RKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
RKG+ + A DE P+A TT E+L KL+P F+KDG+VTAGNAS +NDGAAAVLLMS +A+
Sbjct: 207 RKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAK 266
Query: 204 ARNIQPLARIA--IKSGDATAI-----VAGGQECMSQAPHVINIRNGIKLNDA 249
A + LA+IA +G AI V+ + C+ +A + + I+ N+A
Sbjct: 267 ALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEA 319
>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 262
Score = 226 bits (578), Expect = 1e-71
Identities = 100/162 (61%), Positives = 125/162 (77%), Gaps = 3/162 (1%)
Query: 214 AIKSGDATAIVAGGQECMSQAPHVINI-RNGIKLNDAEMKDSMVFDGLTDAFHNIHMGIT 272
AI++GDA +VAGG E MS AP+V+ R G ++ DA++ D+M+ DGLTDAF+ IHMGIT
Sbjct: 99 AIRAGDADIVVAGGVESMSNAPYVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGIT 158
Query: 273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYP 331
AEN+AKK+ ISR EQDE+A +SQ K A AQ+ G F +EIVPV I RKG +VV KDE
Sbjct: 159 AENVAKKYGISREEQDEFALRSQQKAAAAQKAGKFKDEIVPVTIKGRKGKPLVVDKDEGI 218
Query: 332 KANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMS 372
+ TT+E+L KL+P F K+ GTVTAGNASG+NDGAAAVLLMS
Sbjct: 219 RPGTTLESLAKLKPAFDKENGTVTAGNASGLNDGAAAVLLMS 260
Score = 192 bits (490), Expect = 2e-58
Identities = 83/140 (59%), Positives = 107/140 (76%), Gaps = 3/140 (2%)
Query: 1 MSQAPHVINI-RNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
MS AP+V+ R G ++ DA++ D+M+ DGLTDAF+ IHMGITAEN+AKK+ ISR EQDE
Sbjct: 116 MSNAPYVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISREEQDE 175
Query: 60 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLRPVFQ 118
+A +SQ K A AQ+ G F +EIVPV I RKG +VV KDE + T++++L KL+P F
Sbjct: 176 FALRSQQKAAAAQKAGKFKDEIVPVTIKGRKGKPLVVDKDEGIRPGTTLESLAKLKPAFD 235
Query: 119 KD-GTVTAGNASGINDGAAA 137
K+ GTVTAGNASG+NDGAAA
Sbjct: 236 KENGTVTAGNASGLNDGAAA 255
Score = 90.4 bits (225), Expect = 1e-20
Identities = 38/57 (66%), Positives = 45/57 (78%), Gaps = 2/57 (3%)
Query: 144 TRKGD-VVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMS 198
RKG +VV KDE + TT+E+L KL+P F K+ GTVTAGNASG+NDGAAAVLLMS
Sbjct: 204 GRKGKPLVVDKDEGIRPGTTLESLAKLKPAFDKENGTVTAGNASGLNDGAAAVLLMS 260
>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 229 bits (585), Expect = 5e-71
Identities = 109/218 (50%), Positives = 145/218 (66%), Gaps = 2/218 (0%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH 268
LA I++GDA+ IVAGG E MS AP+++ R G ++ D E+ D MV DGLT AF +H
Sbjct: 97 LADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVH 156
Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAK 327
MG+ +AK+ ISR QDE+AY+S + A E G F+EEIVPV I RKGD +VVAK
Sbjct: 157 MGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAK 216
Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
DE P+ +TT+E L KL+PVF K GT+TAGNA G+NDGAAA++LMS A+ +PLA I
Sbjct: 217 DEAPRKDTTIEKLAKLKPVFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATI 276
Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
+A ++ VE P A+NA+L K G + E++ F
Sbjct: 277 LAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDLF 314
Score = 171 bits (434), Expect = 7e-49
Identities = 94/217 (43%), Positives = 125/217 (57%), Gaps = 18/217 (8%)
Query: 1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
MS AP+++ R G ++ D E+ D MV DGLT AF +HMG+ +AK+ ISR QDE
Sbjct: 118 MSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDE 177
Query: 60 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLRPVFQ 118
+AY+S + A E G F+EEIVPV I RKGD +VVAKDE P+ +T+++ L KL+PVF
Sbjct: 178 WAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKPVFD 237
Query: 119 KDGTVTAGNASGINDGAAA------------GKLYLFTRKGDVVVAKDEYPKANTTVEAL 166
K GT+TAGNA G+NDGAAA G+ L T +A + T A+
Sbjct: 238 KTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAI 297
Query: 167 QKLRPVFQKDG-TVTAGNASGINDGAAAVLLMSYKRA 202
L +K G TV + IN+ AAV L S + A
Sbjct: 298 NAL---LEKTGKTVEDIDLFEINEAFAAVALASTEIA 331
Score = 95.5 bits (238), Expect = 1e-21
Identities = 44/70 (62%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Query: 145 RKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
RKGD +VVAKDE P+ +TT+E L KL+PVF K GT+TAGNA G+NDGAAA++LMS RA+
Sbjct: 207 RKGDPIVVAKDEAPRKDTTIEKLAKLKPVFDKTGTITAGNAPGVNDGAAALVLMSEDRAK 266
Query: 204 ARNIQPLARI 213
+PLA I
Sbjct: 267 QEGRKPLATI 276
>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated.
Length = 401
Score = 221 bits (565), Expect = 5e-68
Identities = 111/237 (46%), Positives = 155/237 (65%), Gaps = 9/237 (3%)
Query: 211 ARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMV----FDGLTDAFHN 266
AR AIK+G+A ++AGG E MS+AP V+ + AE+ D+ + + L A +
Sbjct: 101 AR-AIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYG 159
Query: 267 IH-MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VV 324
+ M TAEN+A+ ++ISR +QD +A +SQ + A AQ G+ EEIVPV I +KGD VV
Sbjct: 160 VDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVV 219
Query: 325 VAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPL 384
V +DE+P+ TT+EAL KL+PVF+ DGTVTAGNASG+NDGAAA+LL S A+ + P
Sbjct: 220 VDRDEHPRPETTLEALAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPR 279
Query: 385 ARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEE--VGYFNRVATSGGIANRRQ 439
ARI+ M++AGVEP +MG GP PA +LA+ G + ++ V N + G+A RQ
Sbjct: 280 ARILGMATAGVEPRIMGIGPAPATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQ 336
Score = 146 bits (370), Expect = 1e-39
Identities = 59/100 (59%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
Query: 39 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAK 97
M TAEN+A+ ++ISR +QD +A +SQ + A AQ G+ EEIVPV I +KGD VVV +
Sbjct: 163 MPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDR 222
Query: 98 DEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAA 137
DE+P+ T+++AL KL+PVF+ DGTVTAGNASG+NDGAAA
Sbjct: 223 DEHPRPETTLEALAKLKPVFRPDGTVTAGNASGVNDGAAA 262
Score = 101 bits (253), Expect = 2e-23
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Query: 145 RKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
+KGD VVV +DE+P+ TT+EAL KL+PVF+ DGTVTAGNASG+NDGAAA+LL S A+
Sbjct: 213 KKGDPVVVDRDEHPRPETTLEALAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAK 272
Query: 204 ARNIQPLARIAIKSGDATAIVA 225
+ P ARI G ATA V
Sbjct: 273 KHGLTPRARIL---GMATAGVE 291
>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 214 bits (547), Expect = 1e-65
Identities = 106/209 (50%), Positives = 144/209 (68%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
LA +I +GD ++AGGQE MS H IR G K D +M D M +DGLTD F + M
Sbjct: 98 LAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFM 157
Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
GITAENI+K+++ISR EQDE+A S K AKAQ G F +EI+P+ ++ +K + DE
Sbjct: 158 GITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDE 217
Query: 330 YPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVA 389
+ +T++E L KLRP F K+G VTAGNAS INDGAA ++++S + + N+ PLARIV+
Sbjct: 218 TVRPDTSLEILSKLRPAFDKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVS 277
Query: 390 MSSAGVEPTLMGTGPIPAVNAVLAKAGWS 418
+SAGV+P++MGT P+PA L+KAGWS
Sbjct: 278 YASAGVDPSIMGTAPVPASQKALSKAGWS 306
Score = 140 bits (353), Expect = 2e-37
Identities = 71/136 (52%), Positives = 91/136 (66%)
Query: 1 MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY 60
MS H IR G K D +M D M +DGLTD F + MGITAENI+K+++ISR EQDE+
Sbjct: 119 MSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQEQDEF 178
Query: 61 AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKD 120
A S K AKAQ G F +EI+P+ ++ +K + DE + +TS++ L KLRP F K+
Sbjct: 179 ALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAFDKN 238
Query: 121 GTVTAGNASGINDGAA 136
G VTAGNAS INDGAA
Sbjct: 239 GVVTAGNASSINDGAA 254
>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase. Members of this family
are designated beta-ketoadipyl CoA thiolase, an enzyme
that acts at the end of pathways for the degradation of
protocatechuate (from benzoate and related compounds)
and of phenylacetic acid.
Length = 400
Score = 210 bits (537), Expect = 6e-64
Identities = 103/215 (47%), Positives = 148/215 (68%), Gaps = 6/215 (2%)
Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMV----FDGLTDAFHNIH- 268
AIK+G+A ++AGG E MS+AP V+ + A+++D+ + + L A + +
Sbjct: 102 AIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDS 161
Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAK 327
M TAEN+A+++ ISR +QD +A +SQ +TA AQ G+F EEIVPVVI +KG+ VV +
Sbjct: 162 MPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQ 221
Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
DE+P+ TT+E L KL+PV + DGTVTAGNASG+NDGAAA+LL S + Q + P ARI
Sbjct: 222 DEHPRPETTLEGLAKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARI 281
Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
+A ++AGVEP +MG GP+PA +LA+AG S ++
Sbjct: 282 LAAATAGVEPRIMGIGPVPATQKLLARAGLSIDQF 316
Score = 134 bits (340), Expect = 2e-35
Identities = 67/143 (46%), Positives = 98/143 (68%), Gaps = 6/143 (4%)
Query: 1 MSQAPHVINIRNGIKLNDAEMKDSMV----FDGLTDAFHNIH-MGITAENIAKKWSISRL 55
MS+AP V+ + A+++D+ + + L A + + M TAEN+A+++ ISR
Sbjct: 119 MSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENVAEEFGISRE 178
Query: 56 EQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLR 114
+QD +A +SQ +TA AQ G+F EEIVPVVI +KG+ VV +DE+P+ T+++ L KL+
Sbjct: 179 DQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLK 238
Query: 115 PVFQKDGTVTAGNASGINDGAAA 137
PV + DGTVTAGNASG+NDGAAA
Sbjct: 239 PVVRPDGTVTAGNASGVNDGAAA 261
Score = 87.5 bits (217), Expect = 8e-19
Identities = 44/82 (53%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Query: 145 RKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
+KG+ VV +DE+P+ TT+E L KL+PV + DGTVTAGNASG+NDGAAA+LL S + Q
Sbjct: 212 KKGEPTVVDQDEHPRPETTLEGLAKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQ 271
Query: 204 ARNIQPLARIAIKSGDATAIVA 225
+ P ARI ATA V
Sbjct: 272 RHGLTPRARIL---AAATAGVE 290
>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional.
Length = 404
Score = 204 bits (520), Expect = 3e-61
Identities = 92/215 (42%), Positives = 134/215 (62%), Gaps = 9/215 (4%)
Query: 211 ARIAIKSGDATAIVAGGQECMSQAPH-VINIRNGIKLNDAEMKDSMVFDGLTD--AFHNI 267
A + +++G A ++AGG E MS ++R G++ ++ D + T +
Sbjct: 98 AAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPV 157
Query: 268 HMGI--TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VV 324
G+ TAEN+ +++ ISR EQD A +S + AQE G FD+EIVPV + RKGD V
Sbjct: 158 PGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTV 217
Query: 325 VAKDEYPKANTTVEALQKLRPVFQK---DGTVTAGNASGINDGAAAVLLMSYKTAQARNI 381
V +DE+P+A+TT+E+L KLRP+ K + TVTAGNASG ND AAA L+ + A+ +
Sbjct: 218 VDRDEHPRADTTLESLAKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGL 277
Query: 382 QPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAG 416
+PLAR+V+ + AGVEP+ MG GP+PA LA+AG
Sbjct: 278 RPLARLVSWAVAGVEPSRMGIGPVPATEKALARAG 312
Score = 138 bits (349), Expect = 1e-36
Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 9/146 (6%)
Query: 1 MSQAPH-VINIRNGIKLNDAEMKDSMVFDGLTD--AFHNIHMGI--TAENIAKKWSISRL 55
MS ++R G++ ++ D + T + G+ TAEN+ +++ ISR
Sbjct: 118 MSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGISRE 177
Query: 56 EQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLR 114
EQD A +S + AQE G FD+EIVPV + RKGD VV +DE+P+A+T++++L KLR
Sbjct: 178 EQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLAKLR 237
Query: 115 PVFQK---DGTVTAGNASGINDGAAA 137
P+ K + TVTAGNASG ND AAA
Sbjct: 238 PIMGKQDPEATVTAGNASGQNDAAAA 263
Score = 85.8 bits (213), Expect = 3e-18
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Query: 144 TRKGD-VVVAKDEYPKANTTVEALQKLRPVFQK---DGTVTAGNASGINDGAAAVLLMSY 199
RKGD VV +DE+P+A+TT+E+L KLRP+ K + TVTAGNASG ND AAA L+ +
Sbjct: 210 QRKGDPTVVDRDEHPRADTTLESLAKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTE 269
Query: 200 KRAQARNIQPLARIA 214
+A+ ++PLAR+
Sbjct: 270 DKAEELGLRPLARLV 284
>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional.
Length = 400
Score = 200 bits (509), Expect = 1e-59
Identities = 103/238 (43%), Positives = 151/238 (63%), Gaps = 9/238 (3%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMV----FDGLTDAFH 265
+A AIKSG+A ++AGG E MS+AP V+ AE+ D+ + + L +
Sbjct: 99 VAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLY 158
Query: 266 NIH-MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-V 323
+ M TAEN+A +++SR +QD +A +SQ K A+AQ G +EIVPV I +KGD +
Sbjct: 159 GVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPL 218
Query: 324 VVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQP 383
VV++DE+P+ TT+EAL KL+ V + DGTVTAGNASG+NDGA A+LL S A+ ++P
Sbjct: 219 VVSRDEHPRE-TTLEALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKP 277
Query: 384 LARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEE--VGYFNRVATSGGIANRRQ 439
AR++ +++AGVEP +MG GP PA +LA+ G + ++ V N S G+A R+
Sbjct: 278 RARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLRE 335
Score = 127 bits (321), Expect = 1e-32
Identities = 63/143 (44%), Positives = 92/143 (64%), Gaps = 7/143 (4%)
Query: 1 MSQAPHVINIRNGIKLNDAEMKDSMV----FDGLTDAFHNIH-MGITAENIAKKWSISRL 55
MS+AP V+ AE+ D+ + + L + + M TAEN+A +++SR
Sbjct: 120 MSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPETAENVATDYNVSRA 179
Query: 56 EQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEYPKANTSVDALQKLR 114
+QD +A +SQ K A+AQ G +EIVPV I +KGD +VV++DE+P+ T+++AL KL+
Sbjct: 180 DQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRE-TTLEALAKLK 238
Query: 115 PVFQKDGTVTAGNASGINDGAAA 137
V + DGTVTAGNASG+NDGA A
Sbjct: 239 GVVRPDGTVTAGNASGVNDGACA 261
Score = 82.5 bits (204), Expect = 4e-17
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 5/82 (6%)
Query: 145 RKGD-VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQ 203
+KGD +VV++DE+P+ TT+EAL KL+ V + DGTVTAGNASG+NDGA A+LL S A+
Sbjct: 213 KKGDPLVVSRDEHPRE-TTLEALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAAR 271
Query: 204 ARNIQPLARIAIKSGDATAIVA 225
++P AR+ G ATA V
Sbjct: 272 RHGLKPRARVL---GIATAGVE 290
>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase.
Length = 394
Score = 193 bits (492), Expect = 3e-57
Identities = 92/220 (41%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH 268
LA +I+ G +VAGG E MS AP + R G +L + D M+ DGL D +++
Sbjct: 96 LAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFG 155
Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD--VVVA 326
MG+ AE A ++SISR EQD YA QS + AQE G F EIVPV + +G V+V
Sbjct: 156 MGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVD 215
Query: 327 KDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLA 385
KDE L+KLRP F++D G+VTAGNAS I+DGAAA++L+S + A +Q +A
Sbjct: 216 KDEGL-GKFDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIA 274
Query: 386 RIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
+I + A P L T P A+ L AG +V Y+
Sbjct: 275 KIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDYY 314
Score = 140 bits (355), Expect = 1e-37
Identities = 66/141 (46%), Positives = 85/141 (60%), Gaps = 5/141 (3%)
Query: 1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDE 59
MS AP + R G +L + D M+ DGL D +++ MG+ AE A ++SISR EQD
Sbjct: 117 MSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDA 176
Query: 60 YAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD--VVVAKDEYPKANTSVDALQKLRPVF 117
YA QS + AQE G F EIVPV + +G V+V KDE L+KLRP F
Sbjct: 177 YAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGL-GKFDPAKLRKLRPSF 235
Query: 118 QKD-GTVTAGNASGINDGAAA 137
++D G+VTAGNAS I+DGAAA
Sbjct: 236 KEDGGSVTAGNASSISDGAAA 256
Score = 76.3 bits (188), Expect = 5e-15
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 149 VVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYKRAQARNI 207
V+V KDE L+KLRP F++D G+VTAGNAS I+DGAAA++L+S ++A +
Sbjct: 212 VIVDKDEGL-GKFDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGL 270
Query: 208 QPLARI 213
Q +A+I
Sbjct: 271 QVIAKI 276
>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism].
Length = 392
Score = 189 bits (481), Expect = 1e-55
Identities = 93/220 (42%), Positives = 124/220 (56%), Gaps = 14/220 (6%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
LA AI SG+A ++AGG E MS AP R G+++ D+ D M D L DA M
Sbjct: 101 LAAQAIASGEADVVLAGGVEKMSDAPMG---REGVRVLDS-AVDPMFEDPLGDATPGYLM 156
Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
G+TAE AK++ ISR +QDE A +S A + G+FD EI P + V D
Sbjct: 157 GLTAERYAKRYGISREDQDEVAVKSHKNAAANPKAGFFD-EITPEDVLNS----PVVADP 211
Query: 330 YPKAN--TTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLAR 386
+ + T + L P F++ GTVTAGNASGINDGAAA+LLMS A+ + PLA
Sbjct: 212 LRRLDCSPTSDGAAALVPAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAA 271
Query: 387 IVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSK-EEVGYF 425
I A + AGV+P++M GP+ AV+ L AG E++G
Sbjct: 272 IRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDLGLA 310
Score = 120 bits (304), Expect = 2e-30
Identities = 58/140 (41%), Positives = 75/140 (53%), Gaps = 12/140 (8%)
Query: 1 MSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEY 60
MS AP R G+++ D+ D M D L DA MG+TAE AK++ ISR +QDE
Sbjct: 122 MSDAPMG---REGVRVLDS-AVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDEV 177
Query: 61 AYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKAN--TSVDALQKLRPVFQ 118
A +S A + G+FD EI P + V D + + + D L P F+
Sbjct: 178 AVKSHKNAAANPKAGFFD-EITPEDVLNS----PVVADPLRRLDCSPTSDGAAALVPAFE 232
Query: 119 K-DGTVTAGNASGINDGAAA 137
+ GTVTAGNASGINDGAAA
Sbjct: 233 EVGGTVTAGNASGINDGAAA 252
Score = 70.8 bits (174), Expect = 3e-13
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 148 DVVVAKDEYPKAN--TTVEALQKLRPVFQK-DGTVTAGNASGINDGAAAVLLMSYKRAQA 204
+ V D + + T + L P F++ GTVTAGNASGINDGAAA+LLMS +A+
Sbjct: 204 NSPVVADPLRRLDCSPTSDGAAALVPAFEEVGGTVTAGNASGINDGAAALLLMSESKAKE 263
Query: 205 RNIQPLARI 213
+ PLA I
Sbjct: 264 LGLAPLAAI 272
>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional.
Length = 401
Score = 176 bits (449), Expect = 5e-51
Identities = 89/222 (40%), Positives = 136/222 (61%), Gaps = 18/222 (8%)
Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDG----------LTDA 263
AI G+ +AGG E MS+AP V+ K A +D+ VFD +
Sbjct: 102 AITCGEGDLYLAGGVESMSRAPFVMG-----KAESAFSRDAKVFDTTIGARFPNPKIVAQ 156
Query: 264 FHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIST--RKG 321
+ N M T +N+A ++ ISR + D +A QSQ K A+E G+F +EI P+ + +
Sbjct: 157 YGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLP 216
Query: 322 DVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNI 381
+VA+DE+P+ ++TVEAL KL+P+F+ G VTAGNASGINDGAAA+L+ S + +
Sbjct: 217 PKLVAEDEHPRPSSTVEALTKLKPLFE-GGVVTAGNASGINDGAAALLIGSRAAGEKYGL 275
Query: 382 QPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVG 423
+P+ARI++ ++AGVEP +MG GP+ A+ LA+AG + +++
Sbjct: 276 KPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLDDMD 317
Score = 112 bits (281), Expect = 3e-27
Identities = 60/149 (40%), Positives = 89/149 (59%), Gaps = 18/149 (12%)
Query: 1 MSQAPHVINIRNGIKLNDAEMKDSMVFDG----------LTDAFHNIHMGITAENIAKKW 50
MS+AP V+ K A +D+ VFD + + N M T +N+A ++
Sbjct: 119 MSRAPFVMG-----KAESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPETGDNVAAEF 173
Query: 51 SISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIST--RKGDVVVAKDEYPKANTSVD 108
ISR + D +A QSQ K A+E G+F +EI P+ + + +VA+DE+P+ +++V+
Sbjct: 174 GISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVE 233
Query: 109 ALQKLRPVFQKDGTVTAGNASGINDGAAA 137
AL KL+P+F+ G VTAGNASGINDGAAA
Sbjct: 234 ALTKLKPLFE-GGVVTAGNASGINDGAAA 261
>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional.
Length = 399
Score = 175 bits (447), Expect = 1e-50
Identities = 88/234 (37%), Positives = 133/234 (56%), Gaps = 21/234 (8%)
Query: 204 ARNIQPLARIA--IKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLT 261
A +Q +A A I+ G+A ++A G E MS P + N ++ A +F
Sbjct: 96 ASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPM---MGNKPSMSPA------IFARDE 146
Query: 262 DAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKG 321
+ MG+TAE +A++W +SR +QD +A +S K AQ+ G F +EI P I+ R
Sbjct: 147 NVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFP 206
Query: 322 DV----------VVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLM 371
D+ V DE P+A+T++E L KL+PVF G+VTAGN+S +DGA AV+L+
Sbjct: 207 DLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANKGSVTAGNSSQTSDGAGAVILV 266
Query: 372 SYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
S K + N+ PLAR V+ + AGV P +MG GPI A+ A L +AG ++++ +
Sbjct: 267 SEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWI 320
Score = 120 bits (303), Expect = 3e-30
Identities = 61/174 (35%), Positives = 88/174 (50%), Gaps = 46/174 (26%)
Query: 39 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
MG+TAE +A++W +SR +QD +A +S K AQ+ G F +EI P I+ R D+
Sbjct: 154 MGLTAEKVAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDL----- 208
Query: 99 EYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPK 158
A G++ + TR V DE P+
Sbjct: 209 -------------------------------------ATGEVDVKTR----TVDLDEGPR 227
Query: 159 ANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLAR 212
A+T++E L KL+PVF G+VTAGN+S +DGA AV+L+S K + N+ PLAR
Sbjct: 228 ADTSLEGLAKLKPVFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLAR 281
>gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional.
Length = 406
Score = 169 bits (431), Expect = 3e-48
Identities = 86/225 (38%), Positives = 134/225 (59%), Gaps = 20/225 (8%)
Query: 214 AIKSGDATAIVAGGQECMSQ-----APHVINIRNGIKLNDAEMKDSMVFDGLTDAFHN-- 266
AIK+G+ ++ G E +S+ + + + +N + +A+ + + +G +A+H+
Sbjct: 103 AIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPL-FAEAQARTAARAEGGAEAWHDPR 161
Query: 267 ---------IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIS 317
I MG TAEN+A+ ISR EQDE+ +SQ + +A G+F+ EI PV
Sbjct: 162 EDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPV--- 218
Query: 318 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQ 377
T VV+ D+ P+A TT E + +L+PVF+ DGTVTAGNA +NDGAAAV++MS A+
Sbjct: 219 TLPDGTVVSTDDGPRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKAR 278
Query: 378 ARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEV 422
+ PLARIV+ +G+ P +MG GP+ A LA+AG S +++
Sbjct: 279 ELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQALARAGMSIDDI 323
Score = 118 bits (297), Expect = 3e-29
Identities = 67/199 (33%), Positives = 90/199 (45%), Gaps = 64/199 (32%)
Query: 37 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVA 96
I MG TAEN+A+ ISR EQDE+ +SQ + +A G+F+ EI P
Sbjct: 171 IAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITP------------- 217
Query: 97 KDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEY 156
V DGTV V+ D+
Sbjct: 218 -------------------VTLPDGTV---------------------------VSTDDG 231
Query: 157 PKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIK 216
P+A TT E + +L+PVF+ DGTVTAGNA +NDGAAAV++MS +A+ + PLARI
Sbjct: 232 PRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIV-- 289
Query: 217 SGDATAIVAGGQECMSQAP 235
+T + E M P
Sbjct: 290 ---STGVSGLSPEIMGLGP 305
>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional.
Length = 394
Score = 167 bits (425), Expect = 1e-47
Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Query: 215 IKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDS--MVFDGLTDAFHNIHMGIT 272
I +G A ++AGG E M++ P N I+ N + D + +D LT + MG+T
Sbjct: 109 IATGMADIVIAGGVEHMTRTPMGDNPH--IEPNPKLLTDPKYIEYD-LTTGYV---MGLT 162
Query: 273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPK 332
AE +A++ I R E D ++ +S AKA + GYF +EI+P+ + VV D+ +
Sbjct: 163 AEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVR 222
Query: 333 ANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSS 392
+T++E L KL P F+ DG +TAGN+S +N GA+ VLLMS K + ++P+A+I +
Sbjct: 223 PDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGF 282
Query: 393 AGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
AGV P +MG GP+PA L KAG S +++ +
Sbjct: 283 AGVPPAIMGKGPVPASKKALEKAGLSVKDIDLW 315
Score = 103 bits (259), Expect = 2e-24
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 56/175 (32%)
Query: 39 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
MG+TAE +A++ I R E D ++ +S AKA + GYF +EI+P+ +
Sbjct: 159 MGLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEV------------ 206
Query: 99 EYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPK 158
+ +G VV D+ +
Sbjct: 207 -------------------EVEGKKK-------------------------VVDVDQSVR 222
Query: 159 ANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
+T++E L KL P F+ DG +TAGN+S +N GA+ VLLMS K + ++P+A+I
Sbjct: 223 PDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKI 277
>gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional.
Length = 391
Score = 167 bits (425), Expect = 1e-47
Identities = 88/223 (39%), Positives = 126/223 (56%), Gaps = 26/223 (11%)
Query: 215 IKSGDATAIVAGGQECMSQAP---HVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGI 271
I G + A++AGG E MS P HV+ R +L +A + M MG
Sbjct: 104 IMLGHSEAVIAGGAESMSLVPMMGHVV--RPNPRLVEAAPEYYM------------GMGH 149
Query: 272 TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD--------- 322
TAE +A K+ ISR +QD +A +S + AKA G F +EIVPV ++ R
Sbjct: 150 TAEQVAVKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEET 209
Query: 323 VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQ 382
+ ++DE +A+TT+E L KLRP F G+VTAGN+S ++DGAAAVLLM + A++ ++
Sbjct: 210 ITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLK 269
Query: 383 PLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
PLA+ + + AGV P +MG GPI A+ L AG ++G F
Sbjct: 270 PLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSDIGLF 312
Score = 111 bits (279), Expect = 5e-27
Identities = 73/226 (32%), Positives = 109/226 (48%), Gaps = 54/226 (23%)
Query: 39 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
MG TAE +A K+ ISR +QD +A +S + AKA G F +EIVPV ++ R
Sbjct: 147 MGHTAEQVAVKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRT-------- 198
Query: 99 EYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPK 158
V KL ++ + ++DE +
Sbjct: 199 --------VGENNKL-------------------------------QEETITFSQDEGVR 219
Query: 159 ANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSG 218
A+TT+E L KLRP F G+VTAGN+S ++DGAAAVLLM ++A++ ++PLA+
Sbjct: 220 ADTTLEILGKLRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFR---- 275
Query: 219 DATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAF 264
+ A+ E M P + I +KL E+ D +F+ L +AF
Sbjct: 276 -SFAVAGVPPEVMGIGP-IAAIPKALKLAGLELSDIGLFE-LNEAF 318
>gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 387
Score = 165 bits (420), Expect = 8e-47
Identities = 80/216 (37%), Positives = 116/216 (53%), Gaps = 18/216 (8%)
Query: 214 AIKSGDATAIVAGGQECMSQAP--HVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGI 271
AI +GD + GG E M P H ++ G+ N A K + + MG+
Sbjct: 104 AIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVA--KAAGM------------MGL 149
Query: 272 TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD-VVVAKDEY 330
TAE + K ISR +QD +A +S + A + G F EI+P G + DE
Sbjct: 150 TAEMLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEV 209
Query: 331 PKANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVA 389
+ TTVEAL LRP F +GTVTAG +S ++DGA+A+L+MS A+ ++P ARI +
Sbjct: 210 IRPETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRS 269
Query: 390 MSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
M+ AG +P++MG GP+PA L +AG S ++ F
Sbjct: 270 MAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVF 305
Score = 106 bits (268), Expect = 2e-25
Identities = 56/176 (31%), Positives = 75/176 (42%), Gaps = 56/176 (31%)
Query: 39 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
MG+TAE + K ISR +QD +A +S + A + G F EI+P
Sbjct: 147 MGLTAEMLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIP--------------- 191
Query: 99 EYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPK 158
A G L LF DE +
Sbjct: 192 --------------------------------TEGHDADGVLKLFDY--------DEVIR 211
Query: 159 ANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
TTVEAL LRP F +GTVTAG +S ++DGA+A+L+MS RA+ ++P ARI
Sbjct: 212 PETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARI 267
>gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional.
Length = 397
Score = 160 bits (407), Expect = 6e-45
Identities = 84/212 (39%), Positives = 122/212 (57%), Gaps = 5/212 (2%)
Query: 217 SGDATAIVAGGQECMSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH-MGITAE 274
+G IVAGG E M+ AP+++ R G+++ ++ D M DGL DA+ MG AE
Sbjct: 109 AGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAE 168
Query: 275 NIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYP-KA 333
A ++ +R QD +A +S + +A E G F EI PV ++ +KGD V+ +DE P KA
Sbjct: 169 ECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKA 228
Query: 334 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSA 393
N E + L+P F K GTVTA N+S I+DGAAA+++M TA+ + PLAR+V S+
Sbjct: 229 N--PEKIPTLKPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTF 286
Query: 394 GVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
P+ T P+ A+ + K GW EV F
Sbjct: 287 AQAPSKFTTAPVGAIRKLFEKNGWRAAEVDLF 318
Score = 113 bits (283), Expect = 1e-27
Identities = 57/140 (40%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 1 MSQAPHVI-NIRNGIKLNDAEMKDSMVFDGLTDAFHNIH-MGITAENIAKKWSISRLEQD 58
M+ AP+++ R G+++ ++ D M DGL DA+ MG AE A ++ +R QD
Sbjct: 123 MTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFTREAQD 182
Query: 59 EYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYP-KANTSVDALQKLRPVF 117
+A +S + +A E G F EI PV ++ +KGD V+ +DE P KAN + + L+P F
Sbjct: 183 AFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKAN--PEKIPTLKPAF 240
Query: 118 QKDGTVTAGNASGINDGAAA 137
K GTVTA N+S I+DGAAA
Sbjct: 241 SKTGTVTAANSSSISDGAAA 260
>gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase.
Length = 452
Score = 158 bits (402), Expect = 1e-43
Identities = 77/218 (35%), Positives = 121/218 (55%), Gaps = 16/218 (7%)
Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITA 273
AIK+G + G E M+ P + +N S D L + MGIT+
Sbjct: 147 AIKAGFYDIGIGAGVESMTTNP----MAWEGGVNPRVESFSQAQDCL------LPMGITS 196
Query: 274 ENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV---VISTRKGD---VVVAK 327
EN+A+++ ++R EQD+ A +S K A A G F +EIVPV ++ + G+ +V++
Sbjct: 197 ENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISV 256
Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
D+ + NTT+ L KL+PVF+K+GT TAGN+S ++DGA AVLLM A + + L
Sbjct: 257 DDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVF 316
Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
+ ++ GV+P +MG GP A+ A + AG +++ F
Sbjct: 317 RSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLF 354
Score = 108 bits (271), Expect = 1e-25
Identities = 46/105 (43%), Positives = 73/105 (69%), Gaps = 6/105 (5%)
Query: 39 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV---VISTRKGD--- 92
MGIT+EN+A+++ ++R EQD+ A +S K A A G F +EIVPV ++ + G+
Sbjct: 192 MGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKP 251
Query: 93 VVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAA 137
+V++ D+ + NT++ L KL+PVF+K+GT TAGN+S ++DGA A
Sbjct: 252 IVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGA 296
>gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated.
Length = 402
Score = 151 bits (384), Expect = 1e-41
Identities = 83/239 (34%), Positives = 122/239 (51%), Gaps = 38/239 (15%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHM 269
LA ++SG ++AGG E MS+ P + G D F +
Sbjct: 100 LAAAKVRSGWDDLVIAGGVESMSRVP--MGSDGGAWAMDPST-----------NFPTYFV 146
Query: 270 --GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAK 327
GI+A+ IA K+ SR + D YA +SQ + A A GYF + +VPV + G ++
Sbjct: 147 PQGISADLIATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPV--KDQNGLTILDH 204
Query: 328 DEYPKANTTVEALQKLRPVFQKDGTV---------------------TAGNASGINDGAA 366
DE+ + TT+E+L KL+P F G + AGN+SGI DGAA
Sbjct: 205 DEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAA 264
Query: 367 AVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
AVL+ S + +A ++P ARIVA ++ G +PT+M TGP+PA LAKAG + +++ F
Sbjct: 265 AVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLF 323
Score = 98.4 bits (246), Expect = 2e-22
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 37/174 (21%)
Query: 40 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 99
GI+A+ IA K+ SR + D YA +SQ + A A GYF + +VPV + G ++ DE
Sbjct: 149 GISADLIATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPV--KDQNGLTILDHDE 206
Query: 100 YPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKA 159
+ + T++++L KL+P F G + +A VA +YP
Sbjct: 207 HMRPGTTMESLAKLKPSFAMMGEMGGFDA----------------------VALQKYP-- 242
Query: 160 NTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
VE + + AGN+SGI DGAAAVL+ S + +A ++P ARI
Sbjct: 243 --EVERINHVH---------HAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARI 285
>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 150 bits (380), Expect = 4e-41
Identities = 80/227 (35%), Positives = 119/227 (52%), Gaps = 27/227 (11%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDG-LTDAFHNIH 268
LA + +G+ VAGG E +S EM M+ +G L + I+
Sbjct: 99 LAAQRVIAGEGDVFVAGGVESIS-------------CVQNEMNRHMLREGWLVEHKPEIY 145
Query: 269 MGI--TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGD---- 322
+ TAEN+AK++ IS+ QDEY QSQ + A AQ G FD+EIVP+ ++ D
Sbjct: 146 WSMLQTAENVAKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATG 205
Query: 323 ------VVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTA 376
V V+ DE + +TT+E + K+R G +TAGNAS +DGA+A ++M+ K A
Sbjct: 206 RLFTKEVTVSADEGIRPDTTLEGVSKIRSALP-GGVITAGNASQFSDGASACVVMNAKVA 264
Query: 377 QARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVG 423
+ +QPL + AG EP MG GP+ AV +L +AG +++
Sbjct: 265 EREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDDID 311
Score = 110 bits (277), Expect = 1e-26
Identities = 69/202 (34%), Positives = 98/202 (48%), Gaps = 50/202 (24%)
Query: 14 IKLNDAEMKDSMVFDG-LTDAFHNIHMGI--TAENIAKKWSISRLEQDEYAYQSQVKTAK 70
I EM M+ +G L + I+ + TAEN+AK++ IS+ QDEY QSQ + A
Sbjct: 120 ISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVAKRYGISKERQDEYGVQSQQRAAA 179
Query: 71 AQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASG 130
AQ G FD+EIVP+ TVTAG A
Sbjct: 180 AQAAGRFDDEIVPI-------------------------------------TVTAGVAD- 201
Query: 131 INDGAAAGKLYLFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDG 190
A G+ LFT+ +V V+ DE + +TT+E + K+R G +TAGNAS +DG
Sbjct: 202 ----KATGR--LFTK--EVTVSADEGIRPDTTLEGVSKIRSALP-GGVITAGNASQFSDG 252
Query: 191 AAAVLLMSYKRAQARNIQPLAR 212
A+A ++M+ K A+ +QPL
Sbjct: 253 ASACVVMNAKVAEREGLQPLGI 274
>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional.
Length = 426
Score = 140 bits (355), Expect = 3e-37
Identities = 74/231 (32%), Positives = 117/231 (50%), Gaps = 25/231 (10%)
Query: 215 IKSGDATAIVAGGQECMSQAPHVIN-------------------IRNGIKLNDAEMKDSM 255
I G A ++AGG E MS AP + + + KL + + +
Sbjct: 103 IALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVI 162
Query: 256 -VFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPV 314
+ GLTD ++MG TAE +A ++ I+R + D YA +S + A AQ G +E+VP+
Sbjct: 163 GLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRL-KEVVPL 221
Query: 315 VISTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSY 373
R G D+ + ++++E L KL+P F + G VTAGN+S I DGA +LL S
Sbjct: 222 F--DRDGKFY-DHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASE 278
Query: 374 KTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGY 424
+ + + PL RIV A ++P+ MG GP+ A +L + G + E++
Sbjct: 279 EAVKKYGLPPLGRIVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDL 329
Score = 95.1 bits (237), Expect = 3e-21
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 29 GLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIST 88
GLTD ++MG TAE +A ++ I+R + D YA +S + A AQ G +E+VP+
Sbjct: 167 GLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRL-KEVVPLF--D 223
Query: 89 RKGDVVVAKDEYPKANTSVDALQKLRPVFQKD-GTVTAGNASGINDGAA 136
R G D+ + ++S++ L KL+P F + G VTAGN+S I DGA
Sbjct: 224 RDGK-FYDHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGAC 271
Score = 64.7 bits (158), Expect = 3e-11
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 142 LFTRKGDVVVAKDEYPKANTTVEALQKLRPVFQKD-GTVTAGNASGINDGAAAVLLMSYK 200
LF R G D+ + ++++E L KL+P F + G VTAGN+S I DGA +LL S +
Sbjct: 221 LFDRDGKFY-DHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEE 279
Query: 201 RAQARNIQPLARIA 214
+ + PL RI
Sbjct: 280 AVKKYGLPPLGRIV 293
>gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA. This
subunit of the FadBA complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit. This protein is almost always located
adjacent to FadB (TIGR02437). The FadBA complex is the
major complex active for beta-oxidation of fatty acids
in E. coli [Fatty acid and phospholipid metabolism,
Degradation].
Length = 385
Score = 137 bits (346), Expect = 2e-36
Identities = 81/216 (37%), Positives = 119/216 (55%), Gaps = 18/216 (8%)
Query: 214 AIKSGDATAIVAGGQECMSQAP--HVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGI 271
AI +GDA + GG E M P H ++ G+ L+ A+ G+ MG+
Sbjct: 102 AIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAA------GM--------MGL 147
Query: 272 TAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDV-VVAKDEY 330
TAE + K ISR +QD +A +S + A + G F EI+P G + DE
Sbjct: 148 TAEMLGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEV 207
Query: 331 PKANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVA 389
+ TTVE+L LRP F K+GTVTAG +S ++DGA+A+L+MS + A ++P ARI +
Sbjct: 208 IRPETTVESLAALRPAFDPKNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRS 267
Query: 390 MSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
M+ AG +P++MG GP+PA L +AG S ++ F
Sbjct: 268 MAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVF 303
Score = 79.6 bits (196), Expect = 3e-16
Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 56/176 (31%)
Query: 39 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
MG+TAE + K ISR +QD +A +S + A + G F EI+P
Sbjct: 145 MGLTAEMLGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIP--------------- 189
Query: 99 EYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPK 158
T G+ A G L F DE +
Sbjct: 190 -------------------------TQGH-------DADGFLKQFDY--------DEVIR 209
Query: 159 ANTTVEALQKLRPVFQ-KDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
TTVE+L LRP F K+GTVTAG +S ++DGA+A+L+MS +RA ++P ARI
Sbjct: 210 PETTVESLAALRPAFDPKNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARI 265
>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional.
Length = 388
Score = 135 bits (341), Expect = 1e-35
Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 215 IKSGDATAIVAGGQECMSQAPHVI--NIRNGIK---LNDAEMKDSMVFDGLTDAFHNIHM 269
I G+ ++AGG E MS AP ++ ++R G K + ++ D+M+ DGL DAF+ HM
Sbjct: 102 IMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHM 161
Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDE 329
G++AE A+K+ I+R DEY+ QS + +A E G F EIVP + +DE
Sbjct: 162 GVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFN--------DLDRDE 213
Query: 330 YPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVA 389
+ TT+E L KL P F K+G +TAGN++ ++DG +A+++ S K ++P+ARI
Sbjct: 214 GIR-KTTMEDLAKLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITG 272
Query: 390 MSSAGVEPTLMGTGPIPAVNAVLAKAGWS 418
SA ++P PIPA +L K S
Sbjct: 273 YESASLDPLDFVEAPIPATRKLLEKQNKS 301
Score = 92.4 bits (229), Expect = 2e-20
Identities = 55/142 (38%), Positives = 83/142 (58%), Gaps = 14/142 (9%)
Query: 1 MSQAPHVI--NIRNGIK---LNDAEMKDSMVFDGLTDAFHNIHMGITAENIAKKWSISRL 55
MS AP ++ ++R G K + ++ D+M+ DGL DAF+ HMG++AE A+K+ I+R
Sbjct: 118 MSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITRE 177
Query: 56 EQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTSVDALQKLRP 115
DEY+ QS + +A E G F EIVP + +DE + T D L KL P
Sbjct: 178 MADEYSVQSYERAIRATESGEFRNEIVPF--------NDLDRDEGIRKTTMED-LAKLPP 228
Query: 116 VFQKDGTVTAGNASGINDGAAA 137
F K+G +TAGN++ ++DG +A
Sbjct: 229 AFDKNGILTAGNSAQLSDGGSA 250
Score = 53.5 bits (128), Expect = 9e-08
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 161 TTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
TT+E L KL P F K+G +TAGN++ ++DG +A+++ S K ++P+ARI
Sbjct: 218 TTMEDLAKLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARI 270
>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional.
Length = 361
Score = 131 bits (331), Expect = 2e-34
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 27/212 (12%)
Query: 215 IKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIHMGITAE 274
I+ G +AGG E S +P ++ F + + MG+ AE
Sbjct: 96 IQGGAGKCYIAGGVESTSTSP---------------FQNRARFS--PETIGDPDMGVAAE 138
Query: 275 NIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKAN 334
+A++++I+R QDEYA S +T +A E GY EEI+ ++ DE K
Sbjct: 139 YVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSF------NGLL---DESIKKE 189
Query: 335 TTVEAL-QKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSA 393
E + ++ +P F +GTVTAGN+ G+NDGA AVL+M A+ +P+ R V +
Sbjct: 190 MNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVV 249
Query: 394 GVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
GV+P L GTGPI AVN +L + E++ YF
Sbjct: 250 GVDPNLPGTGPIFAVNKLLNEMNMKVEDIDYF 281
Score = 89.1 bits (221), Expect = 2e-19
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 39 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
MG+ AE +A++++I+R QDEYA S +T +A E GY EEI+ ++ D
Sbjct: 133 MGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSF------NGLL---D 183
Query: 99 EYPKANTSVDAL-QKLRPVFQKDGTVTAGNASGINDGAAA 137
E K + + + ++ +P F +GTVTAGN+ G+NDGA A
Sbjct: 184 ESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACA 223
Score = 63.6 bits (155), Expect = 5e-11
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 154 DEYPKANTTVEAL-QKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLAR 212
DE K E + ++ +P F +GTVTAGN+ G+NDGA AVL+M +A+ +P+ R
Sbjct: 183 DESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLR 242
Query: 213 IA 214
Sbjct: 243 FV 244
>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional.
Length = 382
Score = 129 bits (326), Expect = 1e-33
Identities = 77/211 (36%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKL------NDAEMKDSMVFDGLTDAFHNI 267
A+ SG +VAGG + MSQ P + G +L +++ D F
Sbjct: 102 AVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRG- 160
Query: 268 HMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAK 327
AE IA+KW ISR E + +A +S + A G FD EIVPV G V V
Sbjct: 161 -----AELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPV------GGVTV-- 207
Query: 328 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARI 387
DE P+ T++E + L+P+ + G +TA AS I+DGA+AVLL S + + + P ARI
Sbjct: 208 DEGPR-ETSLEKMAGLKPLVE-GGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARI 265
Query: 388 VAMSSAGVEPTLMGTGPIPAVNAVLAKAGWS 418
+S G +P M T PIPA L K G S
Sbjct: 266 HHLSVRGDDPVFMLTAPIPATRYALEKTGLS 296
Score = 75.9 bits (187), Expect = 5e-15
Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 10/95 (10%)
Query: 43 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPK 102
AE IA+KW ISR E + +A +S + A G FD EIVPV G V V DE P+
Sbjct: 161 AELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPV------GGVTV--DEGPR 212
Query: 103 ANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAA 137
TS++ + L+P+ + G +TA AS I+DGA+A
Sbjct: 213 -ETSLEKMAGLKPLVE-GGRLTAAVASQISDGASA 245
Score = 48.9 bits (117), Expect = 2e-06
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 151 VAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPL 210
V DE P+ T++E + L+P+ + G +TA AS I+DGA+AVLL S + + + P
Sbjct: 205 VTVDEGPR-ETSLEKMAGLKPLVE-GGRLTAAVASQISDGASAVLLASERAVKRHGLTPR 262
Query: 211 ARI 213
ARI
Sbjct: 263 ARI 265
>gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional.
Length = 417
Score = 129 bits (325), Expect = 3e-33
Identities = 82/254 (32%), Positives = 114/254 (44%), Gaps = 54/254 (21%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLT-------- 261
LA I SG ++AGG E MS A M + G
Sbjct: 101 LAAAQIMSGMEDLVIAGGTEMMSYT--------------AAMAAEDMAAGKPPLGMGSGN 146
Query: 262 ---DAFH-NIHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVIS 317
A H H G+ + IA I+R D +SQ + A+A + G FD+ +VPV
Sbjct: 147 LRLRALHPQSHQGVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVY-- 204
Query: 318 TRKGDVVVAKDEYPKANTTVEALQKLRPVFQK-------DGTVT---------------- 354
G V + +E+P+ TT E L L+P F D T
Sbjct: 205 RDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDDKGTTYRGLINQKYPDLEIKH 264
Query: 355 ---AGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAV 411
AGN+SG+ DGAAA+LL S A+ ++P ARIVAM++ G +PTLM P+PA V
Sbjct: 265 VHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLMLNAPVPAAKKV 324
Query: 412 LAKAGWSKEEVGYF 425
LAKAG +K+++ +
Sbjct: 325 LAKAGLTKDDIDLW 338
Score = 81.0 bits (200), Expect = 2e-16
Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 37/198 (18%)
Query: 38 HMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAK 97
H G+ + IA I+R D +SQ + A+A + G FD+ +VPV G V +
Sbjct: 157 HQGVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVY--RDDGSVALDH 214
Query: 98 DEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYP 157
+E+P+ T+ + L L+P F A A D+
Sbjct: 215 EEFPRPQTTAEGLAALKPAF----------------TAIAD------------YPLDD-- 244
Query: 158 KANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKS 217
K T + + P + AGN+SG+ DGAAA+LL S A+ ++P ARI
Sbjct: 245 KGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIV--- 301
Query: 218 GDATAIVAGGQECMSQAP 235
A A + M AP
Sbjct: 302 --AMANMGDDPTLMLNAP 317
>gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional.
Length = 387
Score = 120 bits (303), Expect = 3e-30
Identities = 61/153 (39%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 273 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRK-------GDVVV 325
AE IAK+ I+R + D + +SQ + A+A G FD EI PV +V
Sbjct: 151 AERIAKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLV 210
Query: 326 AKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLA 385
+D+ + +TT+E L L+PV + G TAG +S I+DGAAAVL M A+A ++P A
Sbjct: 211 TRDQGLR-DTTMEGLAGLKPVL-EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRA 268
Query: 386 RIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWS 418
RIVA + G EP GP+ A VL KAG
Sbjct: 269 RIVAQALVGAEPYYHLDGPVQATAKVLEKAGMK 301
Score = 86.3 bits (214), Expect = 2e-18
Identities = 53/171 (30%), Positives = 75/171 (43%), Gaps = 51/171 (29%)
Query: 43 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPK 102
AE IAK+ I+R + D + +SQ + A+A G FD EI PV
Sbjct: 151 AERIAKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQA---------------- 194
Query: 103 ANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGDVVVAKDEYPKANTT 162
PV ++G T +V +D+ + +TT
Sbjct: 195 ------------PVLDEEGQPTG---------------------ETRLVTRDQGLR-DTT 220
Query: 163 VEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
+E L L+PV + G TAG +S I+DGAAAVL M RA+A ++P ARI
Sbjct: 221 MEGLAGLKPVL-EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARI 270
>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing
enzymes; In general, thiolases catalyze the reversible
thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and
acetyl-CoA, a 2-step reaction involving a covalent
intermediate formed with a catalytic cysteine. There are
2 functional different classes: thiolase-I
(3-ketoacyl-CoA thiolase) and thiolase-II
(acetoacetyl-CoA thiolase). Thiolase-I can cleave longer
fatty acid molecules and plays an important role in the
beta-oxidative degradation of fatty acids. Thiolase-II
has a high substrate specificity. Although it can cleave
acetoacyl-CoA, its main function is the synthesis of
acetoacyl-CoA from two molecules of acetyl-CoA, which
gives it importance in several biosynthetic pathways.
Length = 393
Score = 118 bits (297), Expect = 1e-29
Identities = 62/175 (35%), Positives = 84/175 (48%), Gaps = 21/175 (12%)
Query: 269 MGITAENIAKKWSI--------SRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRK 320
M +AEN AK+ I R D +A Q A++ G F +E + RK
Sbjct: 115 METSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRK 174
Query: 321 GDVVVAKDEYPK--ANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQ- 377
GD+ DEY + +++ + KLRP F K+ +TAGNA G+NDGAAA +LMS AQ
Sbjct: 175 GDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAEAQK 234
Query: 378 ------ARNIQPLARIVAMSSAGVEPT----LMGTGPIPAVNAVLAKAGWSKEEV 422
AR IQ L I M+S + + G GPI A L KAG ++
Sbjct: 235 HGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDL 289
Score = 82.5 bits (203), Expect = 4e-17
Identities = 43/112 (38%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 39 MGITAENIAKKWSI--------SRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRK 90
M +AEN AK+ I R D +A Q A++ G F +E + RK
Sbjct: 115 METSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRK 174
Query: 91 GDVVVAKDEYPK--ANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKL 140
GD+ DEY + S+D + KLRP F K+ +TAGNA G+NDGAAA L
Sbjct: 175 GDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAIL 226
>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional.
Length = 390
Score = 114 bits (288), Expect = 3e-28
Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 12/217 (5%)
Query: 214 AIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNIH----M 269
A+ SG ++A G E M++ P K K G+ + + I
Sbjct: 102 AVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSP----GMEERYPGIQFSQFT 157
Query: 270 GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAK-D 328
G AE +AKK+ +S+ + DE+A QS + A + G F EIVP+ I+ G + D
Sbjct: 158 G--AEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVD 215
Query: 329 EYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIV 388
E + + T+E + ++ + + G +TA AS I DGA+ V++++ + +A ++PLARI
Sbjct: 216 EGIRFDATLEGIAGVKLI-AEGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIH 274
Query: 389 AMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
M+ G +P +M P+PA L KAG +++ +
Sbjct: 275 HMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLY 311
Score = 72.1 bits (177), Expect = 1e-13
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 43 AENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAK-DEYP 101
AE +AKK+ +S+ + DE+A QS + A + G F EIVP+ I+ G + DE
Sbjct: 159 AEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGI 218
Query: 102 KANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAA 137
+ + +++ + ++ + + G +TA AS I DGA+
Sbjct: 219 RFDATLEGIAGVKLI-AEGGRLTAATASQICDGASG 253
Score = 47.0 bits (112), Expect = 1e-05
Identities = 20/60 (33%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 154 DEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARI 213
DE + + T+E + ++ + + G +TA AS I DGA+ V++++ + +A ++PLARI
Sbjct: 215 DEGIRFDATLEGIAGVKLI-AEGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARI 273
>gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional.
Length = 427
Score = 114 bits (288), Expect = 6e-28
Identities = 58/158 (36%), Positives = 82/158 (51%), Gaps = 18/158 (11%)
Query: 269 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 328
MG A AK+W ISR QDE A S A A + G+FD+ I P G + +D
Sbjct: 178 MGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPF-----LG---LTRD 229
Query: 329 EYPKANTTVEALQKLRPVFQK--DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLAR 386
+ ++++E L KL+PVF K T+TAGN++ + DGA+ VLL S + A + LA
Sbjct: 230 NNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAY 289
Query: 387 IVAMSSAGV------EPTLMGTGPIPAVNAVLAKAGWS 418
+V +A V E LM P AV +LA+ G +
Sbjct: 290 LVDAETAAVDFVHGKEGLLM--APAYAVPRLLARNGLT 325
Score = 83.0 bits (206), Expect = 3e-17
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 39 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
MG A AK+W ISR QDE A S A A + G+FD+ I P G + +D
Sbjct: 178 MGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPF-----LG---LTRD 229
Query: 99 EYPKANTSVDALQKLRPVFQK--DGTVTAGNASGINDGAAA 137
+ ++S++ L KL+PVF K T+TAGN++ + DGA+
Sbjct: 230 NNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASV 270
Score = 68.0 bits (167), Expect = 2e-12
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 26/127 (20%)
Query: 151 VAKDEYPKANTTVEALQKLRPVFQK--DGTVTAGNASGINDGAAAVLLMSYKRAQARNIQ 208
+ +D + ++++E L KL+PVF K T+TAGN++ + DGA+ VLL S + A +
Sbjct: 226 LTRDNNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLP 285
Query: 209 PLARIAIKSGDA-TAIV--AGGQECMSQAP--HVINI--RNGIKLNDAEMKDSMVFDGLT 261
LA + DA TA V G+E + AP V + RNG+ L D FD
Sbjct: 286 VLAYLV----DAETAAVDFVHGKEGLLMAPAYAVPRLLARNGLTLQD--------FD--- 330
Query: 262 DAFHNIH 268
F+ IH
Sbjct: 331 --FYEIH 335
>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 428
Score = 114 bits (287), Expect = 6e-28
Identities = 79/244 (32%), Positives = 121/244 (49%), Gaps = 31/244 (12%)
Query: 198 SYKRAQARNIQPLARIA--IKSGDATAIVAGGQECMSQAPHVINI-----RNGIKLNDAE 250
S RA A + Q +A +A I +G +AGG + S P I + R + LN A
Sbjct: 86 SVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLP--IGVSKKLARALVDLNKAR 143
Query: 251 -------------MKDSM-VFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQV 296
++D + V + + + MG TAE +AK + ISR EQD A++S
Sbjct: 144 TLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQ 203
Query: 297 KTAKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVF-QKDGTVTA 355
A+A G D+E++ + K + +D + ++T+E KLRP F +K GTVTA
Sbjct: 204 LAAQAWAEGKLDDEVMTAHVPPYKQ--PLEEDNNIRGDSTLEDYAKLRPAFDRKHGTVTA 261
Query: 356 GNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPT---LMGTGPIPAVNAVL 412
N++ + DGAAAVLLMS A+A + PL + + + A ++ L+ GP A L
Sbjct: 262 ANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLL--GPAYATPLAL 319
Query: 413 AKAG 416
+AG
Sbjct: 320 ERAG 323
Score = 87.7 bits (218), Expect = 8e-19
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 39 MGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVAKD 98
MG TAE +AK + ISR EQD A++S A+A G D+E++ + K + +D
Sbjct: 176 MGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQ--PLEED 233
Query: 99 EYPKANTSVDALQKLRPVF-QKDGTVTAGNASGINDGAAA 137
+ +++++ KLRP F +K GTVTA N++ + DGAAA
Sbjct: 234 NNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAA 273
Score = 70.0 bits (172), Expect = 5e-13
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 151 VAKDEYPKANTTVEALQKLRPVF-QKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQP 209
+ +D + ++T+E KLRP F +K GTVTA N++ + DGAAAVLLMS RA+A + P
Sbjct: 230 LEEDNNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTP 289
Query: 210 LARIAIKSGDATAIVAGGQECM--SQAPHVINIRNGIKLND 248
L ++S AI + + A + R G+ L D
Sbjct: 290 LGY--LRSYAFAAIDVWQDMLLGPAYATPLALERAGLTLAD 328
>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI. This
subunit of the FadJI complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit, and YfcY. This protein is almost always
located adjacent to FadJ (TIGR02440). The FadJI complex
is needed for anaerobic beta-oxidation of short-chain
fatty acids in E. coli [Fatty acid and phospholipid
metabolism, Degradation].
Length = 430
Score = 87.4 bits (216), Expect = 1e-18
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 25/247 (10%)
Query: 198 SYKRAQARNIQPLARIA--IKSGDATAIVAGGQECMSQAPHVIN---IRNGIKLNDAE-- 250
S RA A + Q +A I +G +AGG + S P ++ + + LN A
Sbjct: 88 SVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTL 147
Query: 251 -----------MKDSM-VFDGLTDAFHNIHMGITAENIAKKWSISRLEQDEYAYQSQVKT 298
+KD M V + + + MG TAE +AK + I+R EQD A++S
Sbjct: 148 GQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLA 207
Query: 299 AKAQEGGYFDEEIVPVVISTRKGDVVVAKDEYPKANTTVEALQKLRPVF-QKDGTVTAGN 357
++A G E++ K +A+D + N+T+ KLRP F +K G+VTA N
Sbjct: 208 SQAWRDGKLAGEVMTAFPPPYKQ--WIAEDNNIRHNSTLAGYAKLRPAFDRKHGSVTAAN 265
Query: 358 ASGINDGAAAVLLMSYKTAQARNIQPLARI--VAMSSAGVEPTLMGTGPIPAVNAVLAKA 415
++ + DGAAAV+LM A+ ++PL I A ++ V ++ GP A L +A
Sbjct: 266 STPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDML-MGPSYATPLALQRA 324
Query: 416 GWSKEEV 422
G + ++
Sbjct: 325 GLALSDL 331
Score = 65.4 bits (159), Expect = 2e-11
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 37 IHMGITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTRKGDVVVA 96
+ MG TAE +AK + I+R EQD A++S ++A G E++ K +A
Sbjct: 176 LSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQ--WIA 233
Query: 97 KDEYPKANTSVDALQKLRPVF-QKDGTVTAGNASGINDGAAA 137
+D + N+++ KLRP F +K G+VTA N++ + DGAAA
Sbjct: 234 EDNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAA 275
Score = 56.2 bits (135), Expect = 1e-08
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 151 VAKDEYPKANTTVEALQKLRPVF-QKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQP 209
+A+D + N+T+ KLRP F +K G+VTA N++ + DGAAAV+LM RA+ ++P
Sbjct: 232 IAEDNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEP 291
Query: 210 LARI 213
L I
Sbjct: 292 LGYI 295
>gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 123
Score = 60.3 bits (147), Expect = 3e-11
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 381 IQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEEVGYF 425
++PLARI + ++ GV+P +MG GP A+ L KAG + ++ F
Sbjct: 1 LKPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLF 45
>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that
catalyze a (decarboxylating or non-decarboxylating)
Claisen-like condensation reaction. Members are share
strong structural similarity, and are involved in the
synthesis and degradation of fatty acids, and the
production of polyketides, a diverse group of natural
products.
Length = 254
Score = 54.8 bits (132), Expect = 2e-08
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 355 AGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSS----AGVEPTLMGTGPIPAVNA 410
DGAAA ++ S + A R P A IV+ ++ A + P + G G A
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 411 VLAKAGWSKEEVGYFN 426
L AG + ++ Y
Sbjct: 154 ALEGAGLTPSDIDYVE 169
Score = 36.3 bits (84), Expect = 0.024
Identities = 16/68 (23%), Positives = 23/68 (33%), Gaps = 7/68 (10%)
Query: 181 AGNASGINDGAAAVLLMSYKRAQARNIQPLARI---AIKSGDATAIVA----GGQECMSQ 233
DGAAA ++ S + A R P A I A A+ + A G +
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 234 APHVINIR 241
A +
Sbjct: 154 ALEGAGLT 161
>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid
metabolism / Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 412
Score = 51.9 bits (125), Expect = 4e-07
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 364 GAAAVLLMSYKTAQARNIQPLARIVA--MSSAGVE---PTLMGTGPIPAVNAVLAKAGWS 418
GA A++L + A AR + A IV +S P G G I A+ A LA AG +
Sbjct: 233 GAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLT 292
Query: 419 KEEVGYFNRVATS 431
E++ Y N TS
Sbjct: 293 PEDIDYINAHGTS 305
Score = 30.7 bits (70), Expect = 1.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 190 GAAAVLLMSYKRAQARNIQPLARIA 214
GA A++L + A AR + A I
Sbjct: 233 GAGALVLEELEHALARGAKIYAEIV 257
>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP)
synthase (KAS), type I and II. KASs are responsible for
the elongation steps in fatty acid biosynthesis. KASIII
catalyses the initial condensation and KAS I and II
catalyze further elongation steps by Claisen
condensation of malonyl-acyl carrier protein (ACP) with
acyl-ACP.
Length = 406
Score = 50.2 bits (121), Expect = 1e-06
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 359 SGIN--DGAAAVLLMSYKTAQARNIQPLARIV--AMSSAG---VEPTLMGTGPIPAVNAV 411
G +GA ++L S + A+AR + A I+ SS P G G A+ A
Sbjct: 225 DGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAA 284
Query: 412 LAKAGWSKEEVGYFNRVATS 431
LA AG S E++ Y N TS
Sbjct: 285 LADAGLSPEDIDYINAHGTS 304
Score = 34.8 bits (81), Expect = 0.075
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 12/61 (19%)
Query: 185 SGIN--DGAAAVLLMSYKRAQARNIQPLARIA---IKSGDATAIVA------GGQECMSQ 233
G +GA ++L S + A+AR + A I S DA I A G M
Sbjct: 225 DGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGA-SSDAYHITAPDPDGEGAARAMRA 283
Query: 234 A 234
A
Sbjct: 284 A 284
>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II.
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II,
FabF) is involved in the condensation step of fatty acid
biosynthesis in which the malonyl donor group is
decarboxylated and the resulting carbanion used to
attack and extend the acyl group attached to the acyl
carrier protein. Most genomes encoding fatty acid
biosynthesis contain a number of condensing enzymes,
often of all three types: 1, 2 and 3. Synthase 2 is
mechanistically related to synthase 1 (KAS-I, FabB)
containing a number of absolutely conserved catalytic
residues in common. This model is based primarily on
genes which are found in apparent operons with other
essential genes of fatty acid biosynthesis
(GenProp0681). The large gap between the trusted cutoff
and the noise cutoff contains many genes which are not
found adjacent to genes of the fatty acid pathway in
genomes that often also contain a better hit to this
model. These genes may be involved in other processes
such as polyketide biosyntheses. Some genomes contain
more than one above-trusted hit to this model which may
result from recent paralogous expansions. Second hits to
this model which are not next to other fatty acid
biosynthesis genes may be involved in other processes.
FabB sequences should fall well below the noise cutoff
of this model [Fatty acid and phospholipid metabolism,
Biosynthesis].
Length = 407
Score = 41.3 bits (98), Expect = 8e-04
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 344 RPVFQK--DGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAG-----VE 396
RP F K DG V + +GA ++L + A+AR + A IV +G
Sbjct: 218 RP-FDKDRDGFV-------MGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITA 269
Query: 397 PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATS 431
P G G A+ A L AG + E+V Y N TS
Sbjct: 270 PAPEGEGAARAMRAALKDAGINPEDVDYINAHGTS 304
Score = 31.3 bits (72), Expect = 1.1
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 29/97 (29%)
Query: 170 RPVFQK--DGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIA--IKSGDATAIVA 225
RP F K DG V + +GA ++L + A+AR + A I SGDA I A
Sbjct: 218 RP-FDKDRDGFV-------MGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITA 269
Query: 226 ------GGQECMSQAPHVINIRNGIKLNDAEMKDSMV 256
G M A L DA + V
Sbjct: 270 PAPEGEGAARAMRAA-----------LKDAGINPEDV 295
>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 411
Score = 39.8 bits (94), Expect = 0.002
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 363 DGAAAVLLMSYKTAQARNIQPLARIV--AMSSAG---VEPTLMGTGPIPAVNAVLAKAGW 417
+GA ++L + A+AR + A +V M+ P G G A+ L AG
Sbjct: 232 EGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGI 291
Query: 418 SKEEVGYFNRVATS 431
+ E++ Y N TS
Sbjct: 292 NPEDIDYINAHGTS 305
Score = 30.9 bits (71), Expect = 1.5
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 8/54 (14%)
Query: 189 DGAAAVLLMSYKRAQARNIQPLARIA--IKSGDATAIVA------GGQECMSQA 234
+GA ++L + A+AR + A + +GDA + A G M A
Sbjct: 232 EGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLA 285
>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein
synthase; Validated.
Length = 410
Score = 39.2 bits (92), Expect = 0.003
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 364 GAAAVLLMSYKTAQARNIQPLARIV--AMSSAG---VEPTLMGTGPIPAVNAVLAKAGWS 418
AV+L S ++A+ R +P A+++ +M +P+L G + + A L +AG
Sbjct: 240 ACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSL--EGEMRVIRAALRRAGLG 297
Query: 419 KEEVGYFNRVATS 431
E++ Y N T
Sbjct: 298 PEDIDYVNPHGTG 310
>gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 414
Score = 37.7 bits (87), Expect = 0.012
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 361 INDGAAAVLLMSYKTAQARNIQPLARIVAMSSAG-----VEPTLMGTGPIPAVNAVLAKA 415
+ DGA ++L Y+ A+AR + A +V +G P+ G+G A+ A + A
Sbjct: 232 LGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDA 291
Query: 416 GWSKEEVGYFNRVATS 431
G + E++GY N TS
Sbjct: 292 GVTGEQIGYVNAHGTS 307
>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a
subclass of decarboxylating condensing enzymes,
including beta-ketoacyl [ACP] synthase, type I and II
and polyketide synthases.They are characterized by the
utlization of acyl carrier protein (ACP) thioesters as
primer substrates, as well as the nature of their active
site residues.
Length = 407
Score = 36.3 bits (84), Expect = 0.028
Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 5/81 (6%)
Query: 364 GAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAV----NAVLAKAGWSK 419
GA ++L + A AR R+ +S + LAKAG S
Sbjct: 232 GAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSL 291
Query: 420 EEVGYFNRVATSGGIANRRQE 440
+++ + T AN E
Sbjct: 292 DDLDVISAHGT-STPANDVAE 311
>gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 425
Score = 34.2 bits (79), Expect = 0.13
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 26/95 (27%)
Query: 349 KDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVA------------MSSAGVE 396
+DG V A +GA A++L S ++A AR + L IVA SS
Sbjct: 238 RDGFVMA-------EGAGALVLESLESAVARGAKILG-IVAGCGEKADSFHRTRSSPDGS 289
Query: 397 PTLMGTGPIPAVNAVLAKAGWSKEEVGYFNRVATS 431
P I A+ A LA AG + E++ Y N TS
Sbjct: 290 PA------IGAIRAALADAGLTPEQIDYINAHGTS 318
>gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II.
Length = 540
Score = 33.8 bits (77), Expect = 0.17
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 363 DGAAAVLLMSYKTAQARNIQPLARIVAMSSAG-----VEPTLMGTGPIPAVNAVLAKAGW 417
+GA +LL + A+ R A + S EP G G I + LA++G
Sbjct: 361 EGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGV 420
Query: 418 SKEEVGYFNRVATS 431
SKE+V Y N ATS
Sbjct: 421 SKEDVNYINAHATS 434
>gnl|CDD|184174 PRK13602, PRK13602, putative ribosomal protein L7Ae-like;
Provisional.
Length = 82
Score = 31.3 bits (71), Expect = 0.19
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 148 DVVVAKDEYPKANTTVEALQKLR--PVFQKDGTVTAGNASGINDGAAAVLLM 197
+VVVA+D P+ VEAL + PV + D G A GI GAAAV ++
Sbjct: 30 EVVVAEDADPRLTEKVEALANEKGVPVSKVDSMKKLGKACGIEVGAAAVAII 81
Score = 31.3 bits (71), Expect = 0.19
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 322 DVVVAKDEYPKANTTVEALQKLR--PVFQKDGTVTAGNASGINDGAAAVLLM 371
+VVVA+D P+ VEAL + PV + D G A GI GAAAV ++
Sbjct: 30 EVVVAEDADPRLTEKVEALANEKGVPVSKVDSMKKLGKACGIEVGAAAVAII 81
Score = 27.4 bits (61), Expect = 4.3
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 92 DVVVAKDEYPKANTSVDALQKLR--PVFQKDGTVTAGNASGINDGAAA 137
+VVVA+D P+ V+AL + PV + D G A GI GAAA
Sbjct: 30 EVVVAEDADPRLTEKVEALANEKGVPVSKVDSMKKLGKACGIEVGAAA 77
>gnl|CDD|178301 PLN02698, PLN02698, Probable pectinesterase/pectinesterase
inhibitor.
Length = 497
Score = 33.4 bits (76), Expect = 0.28
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 87 STRKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRK 146
T K + VVAKD T +A+ K TV G+ S + G + FT
Sbjct: 210 RTIKANAVVAKDGTGNYETVSEAITAAHGNHGKYSTVIVGDDS-VTGGTSVPDTATFTIT 268
Query: 147 GDVVVAKD 154
GD +A+D
Sbjct: 269 GDGFIARD 276
>gnl|CDD|235819 PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 398
Score = 33.0 bits (76), Expect = 0.30
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 170 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKRAQARNIQPLARIAIKSGDATAIVAG 226
PV+ + G G G G A ++L S + A+AR +P ARI+ D G
Sbjct: 226 APVWSRGGEDGGGFILG--SGGAFLVLESREHAEARGARPYARISGVESDRARRAPG 280
Score = 32.6 bits (75), Expect = 0.43
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 344 RPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSS 392
PV+ + G G G G A ++L S + A+AR +P ARI + S
Sbjct: 226 APVWSRGGEDGGGFILG--SGGAFLVLESREHAEARGARPYARISGVES 272
>gnl|CDD|235715 PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protein) synthase;
Validated.
Length = 348
Score = 32.7 bits (75), Expect = 0.32
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 16/83 (19%)
Query: 354 TAGNASGI--NDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEP-TLMGTGPIP---- 406
T+ N++G + AAAVLL A P ++ + G EP + + +P
Sbjct: 180 TSQNSNGFIPGEAAAAVLL----GRPAGGEAPGLPLLGLG-LGREPAPVGESEDLPLRGD 234
Query: 407 ----AVNAVLAKAGWSKEEVGYF 425
A+ A LA+AG E++ Y
Sbjct: 235 GLTQAIRAALAEAGCGLEDMDYR 257
>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 424
Score = 32.3 bits (74), Expect = 0.52
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 363 DGAAAVLLMSYKTAQARNIQPLARIVA--MS------SAGVEPTLMGTGPIPAVNAVLAK 414
+GA +++ + + A AR PLA +V S +AG E G G A+ L +
Sbjct: 244 EGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPED---GEGARRAMLIALRQ 300
Query: 415 AGWSKEEVGYFNRVATS 431
AG EEV + N ATS
Sbjct: 301 AGIPPEEVQHLNAHATS 317
>gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol
carrier protein (SCP)-x isoform and related proteins;
SCP-2 has multiple roles in intracellular lipid
circulation and metabolism. The N-terminal presequence
in the SCP-x isoform represents a peroxisomal
3-ketacyl-Coa thiolase specific for branched-chain acyl
CoAs, which is proteolytically cleaved from the sterol
carrier protein.
Length = 375
Score = 31.8 bits (73), Expect = 0.67
Identities = 45/233 (19%), Positives = 76/233 (32%), Gaps = 61/233 (26%)
Query: 210 LARIAIKSGDATAIVAGGQECMSQAPHVINIRNGIKLNDAEMKDSMVFDGLTDAFHNI-- 267
A AI SG A ++ G E MS P +D E + GLT +
Sbjct: 86 AAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGR--ASDLEWEGPEPPGGLT--PPALYA 141
Query: 268 -----HM---GITAENIAKKWSISRLEQDEYAYQSQVKTAKAQEGGYFDEEIVPVVISTR 319
+M G T E++AK ++ +++ + AQ
Sbjct: 142 LAARRYMHRYGTTREDLAK---VAVK-----NHRNAARNPYAQF---------------- 177
Query: 320 KGDVVVAKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASGINDGAAAVLLMSYKTAQAR 379
+ TVE + R + + + ++DGAAAV+L S + A
Sbjct: 178 ------------RKPITVEDVLNSRMIA---DPLRLLDCCPVSDGAAAVVLASEERA-RE 221
Query: 380 NIQPLARIVAMSSAGVEPTLM----GTGPIPAVNA---VLAKAGWSKEEVGYF 425
I+ + +A P+L A A AG + +++
Sbjct: 222 LTDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVA 274
>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase.
Length = 437
Score = 31.3 bits (71), Expect = 0.98
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 361 INDGAAAVLLMSYKTAQAR--NIQPLARIVAMSSAG---VEPTLMGTGPIPAVNAVLAKA 415
I +GA ++L + A+ R I R MS +P G G + A+ L ++
Sbjct: 253 IGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQS 312
Query: 416 GWSKEEVGYFNRVATS 431
G +V Y N ATS
Sbjct: 313 GLHPNQVDYVNAHATS 328
>gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II;
Provisional.
Length = 342
Score = 31.2 bits (70), Expect = 0.98
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 354 TAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLM-----GTGPIPAV 408
TA + + +GA +++ + A AR +PLA IV ++ + G G A+
Sbjct: 153 TARDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAM 212
Query: 409 NAVLAKAGWSKEEVGYFNRVATSGGIAN 436
L +AG + E+V + N ATS + +
Sbjct: 213 KIALRQAGITPEQVQHLNAHATSTPVGD 240
>gnl|CDD|215643 PLN03241, PLN03241, magnesium chelatase subunit H; Provisional.
Length = 1315
Score = 31.4 bits (71), Expect = 1.2
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 15/67 (22%)
Query: 366 AAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVLAKAGWSKEE---V 422
+A+ LMS + V S P GP PAV AVL+K G KEE V
Sbjct: 155 SALELMSCNS------------VGSFSMKAAPGGKKAGPPPAVKAVLSKFGSGKEEDKLV 202
Query: 423 GYFNRVA 429
GY + +
Sbjct: 203 GYLSFLK 209
>gnl|CDD|223606 COG0532, InfB, Translation initiation factor 2 (IF-2; GTPase)
[Translation, ribosomal structure and biogenesis].
Length = 509
Score = 31.0 bits (71), Expect = 1.2
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 11/67 (16%)
Query: 89 RKGDVVVAKDEYPKANTSVDALQKLRPVFQKDGTVTAGNASGINDGAAAGKLYLFTRKGD 148
+KGD++VA EY + T VD L K G G+++ AAG
Sbjct: 209 KKGDIIVAGGEYGRVRTMVDDLGKPIKE---AGPSKPVEILGLSEVPAAG--------DV 257
Query: 149 VVVAKDE 155
+V KDE
Sbjct: 258 FIVVKDE 264
>gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 406
Score = 30.9 bits (70), Expect = 1.3
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 361 INDGAAAVLLMSYKTAQARNIQPLARIVAMSSAG-----VEPTLMGTGPIPAVNAVLAKA 415
+ +GA A++L Y++A+ R + A I+ +G P GP+ A+ A L A
Sbjct: 230 MGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAP--EGPLRAMKAALEMA 287
Query: 416 GWSKEEVGYFNRVATS 431
G K + Y N TS
Sbjct: 288 GNPK--IDYINAHGTS 301
>gnl|CDD|218220 pfam04708, Pox_F16, Poxvirus F16 protein.
Length = 216
Score = 30.0 bits (68), Expect = 1.7
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 22 KDSMVFDGLTDAFHNIHMGITAENIAK 48
+D++ FDG+ +F +++ + N K
Sbjct: 99 RDNLAFDGIPPSFRTVNIDVKIYNRKK 125
Score = 30.0 bits (68), Expect = 1.7
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 252 KDSMVFDGLTDAFHNIHMGITAENIAK 278
+D++ FDG+ +F +++ + N K
Sbjct: 99 RDNLAFDGIPPSFRTVNIDVKIYNRKK 125
>gnl|CDD|199834 cd10276, BamB_YfgL, Beta-barrel assembly machinery (Bam) complex
component B and related proteins. BamB (YflG) is a
non-essential component of the beta-barrel assembly
machinery (Bam), a multi-subunit complex that inserts
proteins with beta-barrel topology into the outer
membrane. BamB has been found to interact with BamA,
which in turn binds and stabilizes pre-folded
beta-barrel proteins; it has been suggested that BamB
participates in the stabilization.
Length = 358
Score = 30.4 bits (69), Expect = 1.8
Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 16/110 (14%)
Query: 82 VPVVISTRKGDVVVAKDEYPKANTSVDALQKL--RPVFQKDGTVTAGNA-SGINDGAAAG 138
PVV GD+V A D AN V A + +++ +G G G
Sbjct: 33 TPVVA----GDMVYAAD----ANGQVSAFNATTGKIIWETS---LSGKGFLGGTPAVGNG 81
Query: 139 KLYLFTRKGDVVV--AKDEYPKANTTVEALQKLRPVFQKDGTVTAGNASG 186
K+++ T G + AKD T V Q L P DG + G G
Sbjct: 82 KIFVGTESGYLYALDAKDGSELWRTEVSDSQLLSPPTYADGKIYVGTGDG 131
>gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 381
Score = 30.0 bits (68), Expect = 2.4
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 363 DGAAAVLLMSYKTAQARNIQPLARIVAMSSA-----GVEPTLMGTGPIPAVNAVLAKAGW 417
+G A ++L S + AQ R + +I+ P G I A+ LA++G
Sbjct: 210 EGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGL 269
Query: 418 SKEEVGY 424
+ E++ Y
Sbjct: 270 TPEDIDY 276
>gnl|CDD|215178 PLN02312, PLN02312, acyl-CoA oxidase.
Length = 680
Score = 29.7 bits (67), Expect = 3.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 368 VLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPAVNAVL 412
VLL+ Y + Q R + LA+ AMS A + ++ P N +
Sbjct: 376 VLLLDYPSHQRRLLPLLAKTYAMSFAANDLKMIYVKRTPESNKAI 420
>gnl|CDD|236380 PRK09107, PRK09107, acetolactate synthase 3 catalytic subunit;
Validated.
Length = 595
Score = 29.7 bits (67), Expect = 3.8
Identities = 31/116 (26%), Positives = 38/116 (32%), Gaps = 42/116 (36%)
Query: 313 PVVISTRKGDVVVAKDEY-------------PKANTTVEALQKL--------RPVFQKDG 351
PVV+ K DV A Y PK EA+ + RPV G
Sbjct: 163 PVVVDIPK-DVQFATGTYTPPQKAPVHVSYQPKVKGDAEAITEAVELLANAKRPVIYSGG 221
Query: 352 TVTAGNASGINDGAAAVLLMSYKTAQARNIQPLARIVAMSSAGVEPTLMGTGPIPA 407
V IN G A L L +V ++ + TLMG G PA
Sbjct: 222 GV-------INSGPEASRL-------------LRELVELTGFPITSTLMGLGAYPA 257
>gnl|CDD|222957 PHA02994, PHA02994, hypothetical protein; Provisional.
Length = 218
Score = 28.5 bits (64), Expect = 6.7
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 22 KDSMVFDGLTDAFHNIHMGITAENIAK 48
+D++ FDG+ +F +++ + N K
Sbjct: 99 RDNLAFDGIPPSFRMVNIDVKIYNRKK 125
Score = 28.5 bits (64), Expect = 6.7
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 252 KDSMVFDGLTDAFHNIHMGITAENIAK 278
+D++ FDG+ +F +++ + N K
Sbjct: 99 RDNLAFDGIPPSFRMVNIDVKIYNRKK 125
>gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase;
Provisional.
Length = 421
Score = 28.5 bits (64), Expect = 6.9
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 6/75 (8%)
Query: 363 DGAAAVLLMSYKTAQARNIQPLARIVAMSSAG-----VEPTLMGTGPIPAVNAVLAKAG- 416
+GA ++L + A R + A I S+ P G G + L
Sbjct: 239 EGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGAN 298
Query: 417 WSKEEVGYFNRVATS 431
+ +V Y N ATS
Sbjct: 299 ININDVDYVNAHATS 313
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.314 0.129 0.360
Gapped
Lambda K H
0.267 0.0746 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 22,453,286
Number of extensions: 2219852
Number of successful extensions: 1856
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1698
Number of HSP's successfully gapped: 164
Length of query: 441
Length of database: 10,937,602
Length adjustment: 100
Effective length of query: 341
Effective length of database: 6,502,202
Effective search space: 2217250882
Effective search space used: 2217250882
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (27.2 bits)