BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy416
(157 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens
GN=VPS13D PE=1 SV=1
Length = 4387
Score = 164 bits (414), Expect = 3e-40, Method: Composition-based stats.
Identities = 83/156 (53%), Positives = 109/156 (69%), Gaps = 5/156 (3%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGF 60
MLE L+AWVLN YLGKYV NLNTDQLSVALL+GAVELENLPLKKDAL++L +P E+K+GF
Sbjct: 1 MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKELELPFEVKAGF 60
Query: 61 IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQWDEELEERAAQEYKIMLLDALEAR 120
IGKV LQ+P + PWVI I L+++ P + +++E E+ +E K LL ALE +
Sbjct: 61 IGKVTLQIPFYRPHVDPWVISISSLHLIGAPEKIQDFNDEKEKLLERERKKALLQALEEK 120
Query: 121 WRAETESACYYSSSYTSWLSYGTSFMTNIVENLQVK 156
W+ + + SY W S S +T IVEN+++K
Sbjct: 121 WKNDRQQK---GESY--WYSVTASVVTRIVENIELK 151
>sp|Q54KX3|VP13F_DICDI Putative vacuolar protein sorting-associated protein 13F
OS=Dictyostelium discoideum GN=vps13F PE=3 SV=1
Length = 4246
Score = 95.1 bits (235), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 67/103 (65%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGF 60
M E +++ +L YL +Y++ LNTD L++++ G V LENL LK AL + +P IK GF
Sbjct: 1 MFESIVSNLLTRYLKEYIKALNTDNLNISIWSGNVSLENLELKSRALEKFNLPFTIKEGF 60
Query: 61 IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQWDEELEE 103
+GK+ L++P + ++ P ++ I+QLY+ P S W+EE E+
Sbjct: 61 LGKLSLKIPWNNLKTEPVIVVIDQLYITASPKSTTVWNEEDED 103
>sp|P87319|VP13A_SCHPO Vacuolar protein sorting-associated protein 13a
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps13a PE=3 SV=2
Length = 3011
Score = 92.8 bits (229), Expect = 7e-19, Method: Composition-based stats.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGF 60
MLE L+A +LN LG YV+NL+T QL++ + G V L NL +K +AL +LGIPIEI SG
Sbjct: 1 MLEGLVAGLLNKILGSYVDNLDTKQLNIGVWGGHVSLHNLRIKPEALDKLGIPIEITSGL 60
Query: 61 IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQWDEELEERAAQEYKIMLLDALEA- 119
IG L++P S R+ I IE +Y+ P + + E++ Q K LD+ E
Sbjct: 61 IGTFTLEIPWSNLRNKSLTINIEDIYLSIHPQAKNSLTRDELEQSQQALKQEQLDSFEIL 120
Query: 120 ----RWRAETESACYYSSSYTSWLSYGTSFMTNIVENLQV 155
R E S+ S S++ Y + + +N+Q+
Sbjct: 121 RKNFRETLEESSSNPNISRKQSFIEY---LIAKLTDNIQI 157
>sp|Q96RL7|VP13A_HUMAN Vacuolar protein sorting-associated protein 13A OS=Homo sapiens
GN=VPS13A PE=1 SV=2
Length = 3174
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGF 60
+ E ++ VLN +LG YV +L+T QLS+ + +GAV L+NL +K++AL QL +P ++K G
Sbjct: 2 VFESVVVDVLNRFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENALSQLDVPFKVKVGH 61
Query: 61 IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQWDEELEERAAQEYKIMLLDALEAR 120
IG +KL +P + P +E++Y++ P S ++D EE+ E K L +E
Sbjct: 62 IGNLKLIIPWKNLYTQPVEAVLEEIYLLIVPSSRIKYDPLKEEKQLMEAKQQELKRIEEA 121
Query: 121 WRAETESACYYSSSYTSWLSYGTSFMTNIVENLQVK 156
+ + + ++ +T I++NLQVK
Sbjct: 122 KQKVVDQEQHLPEKQD---TFAEKLVTQIIKNLQVK 154
>sp|Q54LB8|VP13A_DICDI Putative vacuolar protein sorting-associated protein 13A
OS=Dictyostelium discoideum GN=vps13A PE=2 SV=1
Length = 3373
Score = 86.3 bits (212), Expect = 8e-17, Method: Composition-based stats.
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 12/163 (7%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGI--PIEIKS 58
+ E L++ VL+ LG+YV+NLN DQL + + G+V+L+NL LK+DAL L I PI +K
Sbjct: 2 VFEGLVSDVLSRVLGEYVKNLNKDQLKIGIFGGSVQLQNLELKEDALANLPINLPITVKK 61
Query: 59 GFIGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMA-QWDEELEERAAQEYKIMLLDAL 117
GF+GK+ L+VP +S P +I I+ +Y + P + ++DE+ E + E K L+
Sbjct: 62 GFLGKLDLKVPWKDLKSKPVIINIDCIYALAVPQTQNYKYDEKEEAKKQAELKKKKLENY 121
Query: 118 EARW-----RAETESACYYSSSYTSWLSYGTSFMTNIVENLQV 155
E W AE S + S+ +T I++NLQ+
Sbjct: 122 E--WIKSIKDAEENEISSLQSEKSD--SFTDRLVTKIIDNLQI 160
>sp|Q555C6|VP13B_DICDI Putative vacuolar protein sorting-associated protein 13B
OS=Dictyostelium discoideum GN=vps13B PE=3 SV=1
Length = 6061
Score = 85.9 bits (211), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/157 (31%), Positives = 89/157 (56%), Gaps = 4/157 (2%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGF 60
M E L+A ++ Y+G+Y++NL+++QL + + G V L+NL +K +AL+ +P+ ++ G
Sbjct: 1 MFESLVADIIAKYIGEYIKNLSSEQLKINVFSGNVVLKNLEIKGEALQSFKLPLHVQKGI 60
Query: 61 IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQWDEELEERAAQEYKIMLLDALE-A 119
IG + L++P + +S+P + I+ + + P + ++EE E++ E K L+ E
Sbjct: 61 IGTLTLKIPWTNLKSSPVIFDIDCISLYAIPQTGFDYNEEEEKKNQLELKRKKLEKFELI 120
Query: 120 RWRAETESACYYSSSYTSWLSYGTSFMTNIVENLQVK 156
R E A T ++ TS MT I+ N+QVK
Sbjct: 121 RSFKEGSGA---DQKTTKQDTFMTSVMTKILNNIQVK 154
>sp|Q5H8C4|VP13A_MOUSE Vacuolar protein sorting-associated protein 13A OS=Mus musculus
GN=Vps13a PE=1 SV=1
Length = 3166
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGF 60
+ E ++ VLN +LG YV NL+ QLS+ + +GAV L+NL +K++AL +L +P ++K G
Sbjct: 2 VFESVVVEVLNRFLGDYVVNLDESQLSLGIWKGAVALKNLVIKENALHELDVPFKVKVGH 61
Query: 61 IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQWDEELEERAAQEYKIMLLDALEAR 120
IG +KL++P + P +E+++++ P S Q+D EE+ E K L +E
Sbjct: 62 IGSLKLKIPWKNLYTQPVEAVLEEIFLLIVPSSRIQYDPIKEEKQLMETKQQELKRIE-- 119
Query: 121 WRAETESACYYSSSYTSWLSYGTSFMTNIVENLQVK 156
+A+ + ++ +T I++NLQV+
Sbjct: 120 -KAKQKVFDKEKPREEKQDTFTEKLVTQIIQNLQVQ 154
>sp|Q8BX70|VP13C_MOUSE Vacuolar protein sorting-associated protein 13C OS=Mus musculus
GN=Vps13c PE=1 SV=2
Length = 3748
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 76/130 (58%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGF 60
+LE ++A +LN +LG YVENLN QL + + G V L+NL +K++AL +L +P ++K+G
Sbjct: 2 VLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFKVKAGQ 61
Query: 61 IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQWDEELEERAAQEYKIMLLDALEAR 120
I K+ L++P V +E LY++ P + ++D E EE++ Q+ K L +E
Sbjct: 62 IDKLTLKIPWKNLYGEAVVATLEGLYLLVVPGASIKYDAEKEEKSLQDIKQKELCRIEEA 121
Query: 121 WRAETESACY 130
+ E +
Sbjct: 122 LQKAAEKGAH 131
>sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens
GN=VPS13C PE=1 SV=1
Length = 3753
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 75/130 (57%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGF 60
+LE ++A +LN +LG YVENLN QL + + G V L+NL +K++AL +L +P ++K+G
Sbjct: 2 VLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFKVKAGQ 61
Query: 61 IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQWDEELEERAAQEYKIMLLDALEAR 120
I K+ L++P V +E LY++ P + ++D EE++ Q+ K L +E
Sbjct: 62 IDKLTLKIPWKNLYGEAVVATLEGLYLLVVPGASIKYDAVKEEKSLQDVKQKELSRIEEA 121
Query: 121 WRAETESACY 130
+ E +
Sbjct: 122 LQKAAEKGTH 131
>sp|Q07878|VPS13_YEAST Vacuolar protein sorting-associated protein 13 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS13 PE=1
SV=1
Length = 3144
Score = 76.3 bits (186), Expect = 7e-14, Method: Composition-based stats.
Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGF 60
MLE L A +LN LG YVEN + +QL+V + G V+L+NL L+KD L L +PI++KSG
Sbjct: 1 MLESLAANLLNRLLGSYVENFDPNQLNVGIWSGDVKLKNLKLRKDCLDSLNLPIDVKSGI 60
Query: 61 IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSM-AQWDEELEERA 105
+G + L VP S ++ P I IE Y++ P S + DEE+ +RA
Sbjct: 61 LGDLVLTVPWSSLKNKPVKIIIEDCYLLCSPRSEDHENDEEMIKRA 106
>sp|O42926|VP13B_SCHPO Vacuolar protein sorting-associated protein 13b
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps13b PE=2 SV=1
Length = 3131
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGF 60
MLE L+A LN LG+Y+EN + QL VA+ G V L NL LK+ A R+L +PI ++ G
Sbjct: 1 MLEGLLANFLNRLLGEYIENFDATQLKVAVWNGDVTLRNLQLKRSAFRKLELPISVQYGL 60
Query: 61 IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQWDEELEERAAQEYKIMLLDALEAR 120
+ ++ L++P S ++ P I I + + + E++ E K + EA
Sbjct: 61 VEELTLKIPWSSLKNKPVEIYIVGIRALASMEENVKSQSEVDPHQVLESKRRQMQLWEAS 120
Query: 121 WRAETESACYYSSSYTSWLSYGTSFMTNIVENLQV 155
+ E+A Y + T + S +T +++N+Q+
Sbjct: 121 QIGKAETA-YDPKTQT----FTESLITRMIDNIQI 150
>sp|Q55FG3|VP13C_DICDI Putative vacuolar protein sorting-associated protein 13C
OS=Dictyostelium discoideum GN=tipC PE=3 SV=1
Length = 3848
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGF 60
M+ + A VL YLG YV++LN D + ++ L G L++L +KK L+ + +K
Sbjct: 1 MVSHIAASVLTKYLGDYVDDLNKDNIKLSFLSGEAVLQDLKIKKTVLQSFLPNVIVKQAI 60
Query: 61 IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQWDEELEERAAQEYK--------IM 112
I K+ L VP + P +I IE +YV+ + ++DE+ ++ Q+ K ++
Sbjct: 61 IKKLSLHVPWKDLKGKPAIIKIEGIYVLAE--TSVEFDEQYYKKKFQDEKQAKLHIQEVL 118
Query: 113 LLDALEARWRAETESACYYSSSYTSWLSYGTSFMTNIVENLQV 155
L+ + + ++ + +S ++ ++G+ + +V+NLQ+
Sbjct: 119 RLNKQQLKNPHQSTTTTTTTSDESN--TFGSKLLQTVVDNLQL 159
>sp|Q54LN2|VP13D_DICDI Putative vacuolar protein sorting-associated protein 13D
OS=Dictyostelium discoideum GN=vps13D PE=3 SV=1
Length = 4592
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 55/88 (62%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGF 60
+ E ++A V++ +LG +++ + QL + +L G V L+N+ +K +A + +P+ I G
Sbjct: 2 VFESVVAEVIDRFLGSFLQEVGKKQLKIGVLNGNVVLKNIEVKPEAFKAFDLPLSIDRGI 61
Query: 61 IGKVKLQVPVSQFRSAPWVICIEQLYVV 88
+GK+ ++VP + +S V+ ++ +Y++
Sbjct: 62 VGKLTIKVPWTSLKSESVVVHLQDIYIL 89
>sp|Q55EI3|VP13E_DICDI Putative vacuolar protein sorting-associated protein 13E
OS=Dictyostelium discoideum GN=vps13E PE=3 SV=1
Length = 4241
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGF 60
M+ +++ +L LG Y+E L+T LS+ +G + LENL KK+ +P ++ SG
Sbjct: 1 MVSKILPGLLKKILGNYIEGLDT--LSIPWWKGQIVLENLKFKKELFSSNELPFDLLSGV 58
Query: 61 IGKVKLQVPVSQFRSAPWVICIEQLYVVTGP 91
+ +V + +P+ F P V+ I+ ++++ GP
Sbjct: 59 VKRVVITIPILHFLKDPIVVNIDGVFLLFGP 89
>sp|Q80TY5|VP13B_MOUSE Vacuolar protein sorting-associated protein 13B OS=Mus musculus
GN=Vps13b PE=1 SV=2
Length = 4013
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQ-LGIPIEIKSG 59
MLE + +L +Y+ +Y++NL L ++L G V L L LK D L Q L +P SG
Sbjct: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
Query: 60 FIGKVKLQVPVSQFRSAPWVICIEQL 85
I ++++ VP ++ S P VI I +
Sbjct: 61 HIHELRIHVPWTKLGSEPVVITINTM 86
>sp|Q7Z7G8|VP13B_HUMAN Vacuolar protein sorting-associated protein 13B OS=Homo sapiens
GN=VPS13B PE=1 SV=2
Length = 4022
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 MLERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQ-LGIPIEIKSG 59
MLE + +L +Y+ +Y++NL L ++L G V L L LK D L Q L +P SG
Sbjct: 1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG 60
Query: 60 FIGKVKLQVPVSQFRSAPWVICIEQLYVV 88
I ++++ VP ++ S P VI I + +
Sbjct: 61 HIHELRIHVPWTKLGSEPVVITINTMECI 89
>sp|Q08D51|ATG2A_XENTR Autophagy-related protein 2 homolog A OS=Xenopus tropicalis
GN=atg2a PE=2 SV=1
Length = 1997
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 4 RLIAWVLNNYLGKYVEN-LNTDQLSVALLQGAVELENLPLK----KDALRQLGIPIEIKS 58
R ++L +YLG Y+E L+ +QLS+ L G+ L ++ L + L G P+EI
Sbjct: 15 RACRYLLQHYLGHYLEERLSLEQLSLDLYNGSGRLTDIHLDIWSVNELLDSAGAPLEIID 74
Query: 59 GFIGKVKLQVPVSQFRSAPWVICIEQLYVVTGP 91
GFIG + + +P S + + + +L V P
Sbjct: 75 GFIGSISVTIPWSALVTENCTLEVSKLQVTCRP 107
>sp|Q80XK6|ATG2B_MOUSE Autophagy-related protein 2 homolog B OS=Mus musculus GN=Atg2b
PE=1 SV=3
Length = 2075
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 3 ERLIAWVLNNYLGKYV-ENLNTDQLSVALLQGAVELENLPLKK----DALRQLGIPIEIK 57
+R ++L YLG ++ E L+ +QLS+ L QG L +PL K + L P+E+
Sbjct: 11 KRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEILESADAPLEVT 70
Query: 58 SGFIGKVKLQVP 69
GFI + L VP
Sbjct: 71 EGFIQSISLSVP 82
>sp|Q96BY7|ATG2B_HUMAN Autophagy-related protein 2 homolog B OS=Homo sapiens GN=ATG2B
PE=1 SV=5
Length = 2078
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 3 ERLIAWVLNNYLGKYV-ENLNTDQLSVALLQGAVELENLPLKK----DALRQLGIPIEIK 57
+R ++L YLG ++ E L+ +QLS+ L QG L +PL K + L P+E+
Sbjct: 11 KRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEILESADAPLEVT 70
Query: 58 SGFIGKVKLQVP 69
GFI + L VP
Sbjct: 71 EGFIQSISLSVP 82
>sp|A2RSJ4|UH1BL_MOUSE UHRF1-binding protein 1-like OS=Mus musculus GN=Uhrf1bp1l PE=2
SV=2
Length = 1457
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 13 YLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQ-LGIP--IEIKSGFIGKVKLQVP 69
+L ++ +NL+ D+++++ L+G EL+NL L ++ L+ L +P + I F K +++P
Sbjct: 12 HLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAISKVFCNKASIRIP 71
Query: 70 VSQFRSAPWVICIEQL 85
++ ++ P + ++++
Sbjct: 72 WTKLKTQPICLSLDKV 87
>sp|Q4PFE7|ATG2_USTMA Autophagy-related protein 2 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=ATG2 PE=3 SV=1
Length = 2081
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 3 ERLIAWVLNNYLGKYVE--NLNTDQLSVALLQGAVELENLPLKKDAL-RQL-GIPIEIKS 58
+R+++++L LG V+ L+ +Q+ + G +E+ N+ L A+ R L +PI +
Sbjct: 29 KRILSYLLKRTLGHLVDGGQLDLEQIDAGIGSGRIEVRNVQLDAQAISRHLPSLPITFVA 88
Query: 59 GFIGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVS 93
G IG + +Q+PV F + I + + + P S
Sbjct: 89 GQIGSILIQLPVPYFWNGELSINVSDISIHAKPRS 123
>sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1
SV=2
Length = 1464
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 13 YLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQ-LGIP--IEIKSGFIGKVKLQVP 69
+L ++ +NL+ D+++++ L+G EL+NL L ++ L+ L +P + I F K +++P
Sbjct: 12 HLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINKVFCNKASIRIP 71
Query: 70 VSQFRSAPWVICIEQL 85
++ ++ P + ++++
Sbjct: 72 WTKLKTHPICLSLDKV 87
>sp|P0CM30|ATG2_CRYNJ Autophagy-related protein 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ATG2 PE=3 SV=1
Length = 1935
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 4 RLIAWVLNNYLGKYVEN--LNTDQLSVALLQGAVELENLPLKKDALRQL---GIPIEIKS 58
R +++VL LG++V + L+ +++ + +G VE+ENL ++ + +P+ + S
Sbjct: 30 RFLSYVLKRTLGRFVSHQALDAERIQAQVSEGWVEIENLEIECSEINNYIPPPLPLSLTS 89
Query: 59 GFIGKVKLQVPVSQFRSAPWVICIEQL---YVVTGPVSMAQ 96
G I K+ ++P S P + ++ L + ++ P +++
Sbjct: 90 GTINKLTAKLPFPNLWSDPLQVSLDTLTLDFTLSSPSPLSR 130
>sp|P0CM31|ATG2_CRYNB Autophagy-related protein 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ATG2 PE=3 SV=1
Length = 1935
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 4 RLIAWVLNNYLGKYVEN--LNTDQLSVALLQGAVELENLPLKKDALRQL---GIPIEIKS 58
R +++VL LG++V + L+ +++ + +G VE+ENL ++ + +P+ + S
Sbjct: 30 RFLSYVLKRTLGRFVSHQALDAERIQAQVSEGWVEIENLEIECSEINNYIPPPLPLSLTS 89
Query: 59 GFIGKVKLQVPVSQFRSAPWVICIEQL---YVVTGPVSMAQ 96
G I K+ ++P S P + ++ L + ++ P +++
Sbjct: 90 GTINKLTAKLPFPNLWSDPLQVSLDTLTLDFTLSSPSPLSR 130
>sp|Q6P4T0|ATG2A_MOUSE Autophagy-related protein 2 homolog A OS=Mus musculus GN=Atg2a PE=1
SV=2
Length = 1914
Score = 38.1 bits (87), Expect = 0.020, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 3 ERLIAWVLNNYLGKYV-ENLNTDQLSVALLQGAVELENLPLK----KDALRQLGIPIEIK 57
ER+ ++L +YLG + E+L+ DQLS+ L +G+V L ++ L+ + LR + P+E+
Sbjct: 14 ERVCRYLLQHYLGHFFQEHLSLDQLSLDLYKGSVALRDIHLETWSVNEFLRSMESPLELV 73
Query: 58 SGFIGKVKLQVPVSQFRSAPWVICIEQLYVVTGP 91
GF+ +++ VP + + +C+ L + P
Sbjct: 74 EGFVSSIEVAVPWAALLTDHCTVCVSGLQLTLQP 107
>sp|Q6NRZ1|UH1BL_XENLA UHRF1-binding protein 1-like OS=Xenopus laevis GN=uhrf1bp1l PE=2
SV=1
Length = 1415
Score = 37.7 bits (86), Expect = 0.026, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 13 YLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQ-LGIP--IEIKSGFIGKVKLQVP 69
+L ++ +NL+ D+++++ L+G +L NL L ++ L+ L +P + I F K +++P
Sbjct: 12 HLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEVLQNMLDLPTWLAINKVFCNKAAIRIP 71
Query: 70 VSQFRSAPWVICIEQL 85
++ ++ P + ++++
Sbjct: 72 WTKLKTHPISLSLDKV 87
>sp|Q6BDS2|URFB1_HUMAN UHRF1-binding protein 1 OS=Homo sapiens GN=UHRF1BP1 PE=1 SV=1
Length = 1440
Score = 36.2 bits (82), Expect = 0.091, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 13 YLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQ-LGIP--IEIKSGFIGKVKLQVP 69
+L ++ +NL+ D+++++ L+G +L NL L ++ L+ L +P + I + + +++
Sbjct: 12 HLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEVLQNVLELPTWLAITRVYCNRASIRIQ 71
Query: 70 VSQFRSAPWVICIEQLYV 87
++ ++ P +C++++ V
Sbjct: 72 WTKLKTHPICLCLDKVEV 89
>sp|P17599|SYN1_BOVIN Synapsin-1 OS=Bos taurus GN=SYN1 PE=1 SV=2
Length = 706
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 41 PLKKDALRQLGIPIEIKSGF----IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQ 96
P K+ L P+ +K G +GKVK+ F+ V+ + + Y T P A+
Sbjct: 253 PNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQ-HDFQDIASVVALTKTYATTEPFIDAK 311
Query: 97 WDEELEERAAQEYKIMLLDALEARWRAETESACY----YSSSYTSWL 139
+D ++ + Q YK + ++ W+ T SA S Y W+
Sbjct: 312 YDVRIQ-KIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWV 357
>sp|Q2TAZ0|ATG2A_HUMAN Autophagy-related protein 2 homolog A OS=Homo sapiens GN=ATG2A
PE=1 SV=3
Length = 1938
Score = 35.4 bits (80), Expect = 0.15, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 3 ERLIAWVLNNYLGKYV-ENLNTDQLSVALLQGAVELENLPLK----KDALRQLGIPIEIK 57
ER+ ++L++YLG + E+L+ DQLS+ L +G+V L ++ L+ + L + P+E+
Sbjct: 14 ERVCRYLLHHYLGHFFQEHLSLDQLSLDLYKGSVALRDIHLEIWSVNEVLESMESPLELV 73
Query: 58 SGFIGKVKLQVP 69
GF+G +++ VP
Sbjct: 74 EGFVGSIEVAVP 85
>sp|P09951|SYN1_RAT Synapsin-1 OS=Rattus norvegicus GN=Syn1 PE=1 SV=3
Length = 704
Score = 33.5 bits (75), Expect = 0.58, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 41 PLKKDALRQLGIPIEIKSGF----IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQ 96
P K+ L P+ +K G +GKVK+ F+ V+ + + Y P A+
Sbjct: 253 PNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQ-HDFQDIASVVALTKTYATAEPFIDAK 311
Query: 97 WDEELEERAAQEYKIMLLDALEARWRAETESACY----YSSSYTSWL 139
+D ++ + Q YK + ++ W+ T SA S Y W+
Sbjct: 312 YDVRVQ-KIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWV 357
>sp|O88935|SYN1_MOUSE Synapsin-1 OS=Mus musculus GN=Syn1 PE=1 SV=2
Length = 706
Score = 33.5 bits (75), Expect = 0.58, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 41 PLKKDALRQLGIPIEIKSGF----IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQ 96
P K+ L P+ +K G +GKVK+ F+ V+ + + Y P A+
Sbjct: 253 PNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQ-HDFQDIASVVALTKTYATAEPFIDAK 311
Query: 97 WDEELEERAAQEYKIMLLDALEARWRAETESACY----YSSSYTSWL 139
+D ++ + Q YK + ++ W+ T SA S Y W+
Sbjct: 312 YDVRVQ-KIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWV 357
>sp|P17600|SYN1_HUMAN Synapsin-1 OS=Homo sapiens GN=SYN1 PE=1 SV=3
Length = 705
Score = 33.5 bits (75), Expect = 0.58, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 41 PLKKDALRQLGIPIEIKSGF----IGKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQ 96
P K+ L P+ +K G +GKVK+ F+ V+ + + Y P A+
Sbjct: 253 PNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQ-HDFQDIASVVALTKTYATAEPFIDAK 311
Query: 97 WDEELEERAAQEYKIMLLDALEARWRAETESACY----YSSSYTSWL 139
+D ++ + Q YK + ++ W+ T SA S Y W+
Sbjct: 312 YDVRVQ-KIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWV 357
>sp|Q8K341|ATAT_MOUSE Alpha-tubulin N-acetyltransferase OS=Mus musculus GN=Atat1 PE=2
SV=1
Length = 421
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 86 YVVTGPVSMAQWDEELEERAAQEYKIMLLDALEARWRAETESACYYSSSYTSWLSYGTSF 145
++ TG Q ++E E+R+A E +++LLD +T + + SW G
Sbjct: 346 FLGTGNQERKQGEQEAEDRSASEDRVLLLDG-SGEEPTQTGAPRAQAPPPQSWTVGGDIM 404
Query: 146 MTNIVENLQVKK 157
++ NLQ ++
Sbjct: 405 NARVIRNLQERR 416
>sp|C5D639|SYT_GEOSW Threonine--tRNA ligase OS=Geobacillus sp. (strain WCH70) GN=thrS
PE=3 SV=1
Length = 644
Score = 32.7 bits (73), Expect = 0.98, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 2 LERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGFI 61
+ER +A+++ Y G + L Q+ V + A L+ K+AL+ G +E+
Sbjct: 526 MERFVAFLIEEYKGAFPTWLAPVQVEVIPVSPAAHLDYAYKVKEALQSQGFRVEVDER-D 584
Query: 62 GKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQWDEELEERAAQEYKIMLLDALEARW 121
K+ ++ +Q + P+++ V G MA+ + + Q+ + M LD A
Sbjct: 585 EKIGYKIREAQIQKIPYML-------VVGDKEMAENAVNVRKYGEQKSETMSLDDFIAAL 637
Query: 122 RAE 124
+AE
Sbjct: 638 KAE 640
>sp|Q2IJ92|RS7_ANADE 30S ribosomal protein S7 OS=Anaeromyxobacter dehalogenans (strain
2CP-C) GN=rpsG PE=3 SV=1
Length = 156
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 3 ERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLK--KDALRQLGIPIEIKSGF 60
+R++A +NN + K ++ + A Q +L++ PLK K AL + +E+KS
Sbjct: 20 DRIVAKFVNNLMRKGKKSTGERIIYGAFDQVEAKLKDDPLKVFKKALDNVKPVVEVKSRR 79
Query: 61 IGKVKLQVPV 70
+G QVPV
Sbjct: 80 VGGATYQVPV 89
>sp|B4UB96|RS7_ANASK 30S ribosomal protein S7 OS=Anaeromyxobacter sp. (strain K)
GN=rpsG PE=3 SV=1
Length = 156
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 3 ERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLK--KDALRQLGIPIEIKSGF 60
+R++A +NN + K ++ + A Q +L++ PLK K AL + +E+KS
Sbjct: 20 DRIVAKFVNNLMRKGKKSTGERIIYGAFDQVEAKLKDDPLKVFKKALDNVKPVVEVKSRR 79
Query: 61 IGKVKLQVPV 70
+G QVPV
Sbjct: 80 VGGATYQVPV 89
>sp|B8J857|RS7_ANAD2 30S ribosomal protein S7 OS=Anaeromyxobacter dehalogenans (strain
2CP-1 / ATCC BAA-258) GN=rpsG PE=3 SV=1
Length = 156
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 3 ERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLK--KDALRQLGIPIEIKSGF 60
+R++A +NN + K ++ + A Q +L++ PLK K AL + +E+KS
Sbjct: 20 DRIVAKFVNNLMRKGKKSTGERIIYGAFDQVEAKLKDDPLKVFKKALDNVKPVVEVKSRR 79
Query: 61 IGKVKLQVPV 70
+G QVPV
Sbjct: 80 VGGATYQVPV 89
>sp|Q9K866|SYT_BACHD Threonine--tRNA ligase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=thrS PE=3
SV=1
Length = 645
Score = 31.2 bits (69), Expect = 2.8, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 2 LERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGFI 61
+ER +A++L Y G + L Q+ V + LE ++ L+Q GI +EI
Sbjct: 528 MERFVAFLLEEYKGAFPTWLAPVQVQVIPVSPEAHLEYAKNVQETLQQAGIRVEIDER-D 586
Query: 62 GKVKLQVPVSQFRSAPWVICIEQLYVVTGPVSMAQWDEE 100
K+ ++ +Q + P+++ + V V++ ++ E+
Sbjct: 587 EKIGYKIREAQMQKIPYMLVLGDKEVEANGVNVRKYGEK 625
>sp|B8IUW4|SYP_METNO Proline--tRNA ligase OS=Methylobacterium nodulans (strain ORS2060 /
LMG 21967) GN=proS PE=3 SV=1
Length = 443
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 12/63 (19%)
Query: 69 PVSQFRSA-----PWVICIEQLYVVTGPVSMAQWDEELEERAAQEYKIMLLDALEARWRA 123
P ++F +A PW V+ GP +A+ EL+ RA E +I+ +DA+ R R
Sbjct: 388 PGAKFATADLIGLPW-------QVIVGPKGLAEGTIELKRRATGEREIVAVDAVAPRLRG 440
Query: 124 ETE 126
E
Sbjct: 441 AKE 443
>sp|D7REY3|CDHA_PSEU3 Caffeine dehydrogenase subunit alpha OS=Pseudomonas sp. (strain
CBB1) GN=cdhA PE=1 SV=1
Length = 791
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 32 QGAVELENLPLKKDALRQLGIPIEIKSG---FIGKVKLQVPVSQFRSAPWVICIEQLYVV 88
Q E PL +D +R G P+ + + ++ + L++ V ++ P V I+ V
Sbjct: 95 QNHRETPTSPLARDIVRYAGEPVAVVAAINRYVAEDALELIVVKYEELPVVASIDASLAV 154
Query: 89 TGPVSMAQWDEELEERAAQE 108
GP W + + + + E
Sbjct: 155 DGPRLYEGWPDNVVAKVSSE 174
>sp|B0KA81|DNAK_THEP3 Chaperone protein DnaK OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=dnaK PE=3 SV=1
Length = 612
Score = 30.0 bits (66), Expect = 6.2, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 3 ERLIAWVLNNYLGKYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIP 53
+R+I W+ +N+ +Y +L D++++ L+ A E + L + + +P
Sbjct: 205 QRIIDWLADNFKKEYGIDLRNDRMALQRLKDAAEKAKIELSSATVTNINLP 255
>sp|Q06801|DPEP_SOLTU 4-alpha-glucanotransferase, chloroplastic/amyloplastic OS=Solanum
tuberosum GN=DPEP PE=1 SV=1
Length = 576
Score = 30.0 bits (66), Expect = 6.4, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 16 KYVENLNTDQLSVALLQGAVELENLPLKKDALRQLGIPIEIKSGFIGKVKLQVPVSQFRS 75
KY+ N+ +++S L++GAV R IP++ G ++ +P +QF +
Sbjct: 494 KYLSNIEEEEISRGLIEGAVS--------SVARIAIIPMQDVLGLGSDSRMNIPATQFGN 545
Query: 76 APWVI 80
W I
Sbjct: 546 WSWRI 550
>sp|B2TIX3|GUAA_CLOBB GMP synthase [glutamine-hydrolyzing] OS=Clostridium botulinum
(strain Eklund 17B / Type B) GN=guaA PE=3 SV=1
Length = 513
Score = 29.6 bits (65), Expect = 7.5, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 12/128 (9%)
Query: 38 ENLPLKKDALRQLGIPI-------EIKSGFIGKVKLQVPVSQFRSAPWVICIEQLYVVTG 90
EN PL A+ +LG+PI ++ S +G PVS++ + IE
Sbjct: 62 ENSPLCDKAIFELGVPIFGICYGSQLMSHILGGKVATAPVSEYGKTKVDVNIESKLFEGV 121
Query: 91 PVSMAQWDEELE--ERAAQEYKIMLLDALEARWRAETESACYYSSSYTSWLSY---GTSF 145
S W + E+A +E+K++ + E E Y+ + + + GT
Sbjct: 122 SSSTICWMSHTDYIEKAPEEFKVIGNTPVCPVAAMECEDKNLYAVQFHPEVMHTEEGTKM 181
Query: 146 MTNIVENL 153
++N V N+
Sbjct: 182 LSNFVYNI 189
>sp|B5YE89|HIS4_DICT6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Dictyoglomus
thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)
GN=hisA PE=3 SV=1
Length = 242
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 14 LGKYVENLNTDQLSVALLQGAVEL--ENLPLKKDALRQLGIPIEIKSGFIGKVKLQVPVS 71
L KY E L + LQ A++ E+ + +D +R + IP+E+ G+ + K++ +S
Sbjct: 35 LAKYWEEKGAKALHLIDLQSAIDANDESKSIVRDIVRSVSIPVEVGGGYRSREKIEEAIS 94
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,577,656
Number of Sequences: 539616
Number of extensions: 2020586
Number of successful extensions: 6471
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 6435
Number of HSP's gapped (non-prelim): 57
length of query: 157
length of database: 191,569,459
effective HSP length: 108
effective length of query: 49
effective length of database: 133,290,931
effective search space: 6531255619
effective search space used: 6531255619
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)