BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4160
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P83877|TXN4A_MOUSE Thioredoxin-like protein 4A OS=Mus musculus GN=Txnl4a PE=2 SV=1
Length = 142
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 111/116 (95%), Positives = 115/116 (99%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFR 104
VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT+VPDFNKMYELYDPCT MFFFR
Sbjct: 27 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFR 86
Query: 105 NKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTKYRY 160
NKHIMIDLGTGNNNKINWA+EDKQEM+DI+ETVYRGARKGRGLVVSPKDYSTKYRY
Sbjct: 87 NKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYSTKYRY 142
>sp|P83876|TXN4A_HUMAN Thioredoxin-like protein 4A OS=Homo sapiens GN=TXNL4A PE=1 SV=1
Length = 142
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 111/116 (95%), Positives = 115/116 (99%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFR 104
VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT+VPDFNKMYELYDPCT MFFFR
Sbjct: 27 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFR 86
Query: 105 NKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTKYRY 160
NKHIMIDLGTGNNNKINWA+EDKQEM+DI+ETVYRGARKGRGLVVSPKDYSTKYRY
Sbjct: 87 NKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYSTKYRY 142
>sp|P87215|DIMI_SCHPO Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=dim1 PE=1 SV=1
Length = 142
Score = 197 bits (501), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 92/116 (79%), Positives = 103/116 (88%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFR 104
VIRFG D D C+K DEVLY IAEKV N AVIYLVDI +VPDFNKMYELYD T MFF+R
Sbjct: 27 VIRFGRDHDEECIKQDEVLYRIAEKVVNMAVIYLVDIDEVPDFNKMYELYDRTTIMFFYR 86
Query: 105 NKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTKYRY 160
NKH+MIDLGTGNNNKINW LEDKQEMIDI+ET++RGARKG+GLV+SPKDYST++RY
Sbjct: 87 NKHMMIDLGTGNNNKINWPLEDKQEMIDIIETIFRGARKGKGLVISPKDYSTRHRY 142
>sp|Q553S5|TXN4A_DICDI Thioredoxin-like protein 4A homolog OS=Dictyostelium discoideum
GN=txnl4a PE=3 SV=4
Length = 160
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 104/116 (89%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFR 104
VIRFGHD++P CMK D++L SIAEKVKN AVIY+VDIT+VPD N MYELYD C MFF+R
Sbjct: 18 VIRFGHDYNPECMKQDDILASIAEKVKNMAVIYVVDITEVPDLNSMYELYDDCPTMFFYR 77
Query: 105 NKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTKYRY 160
NKHIM+DLGTGNNNKINWAL +KQ+MIDI+ETVY+GARKG+GLV SP+D+S +Y++
Sbjct: 78 NKHIMVDLGTGNNNKINWALTNKQDMIDIIETVYKGARKGKGLVNSPRDFSPQYKF 133
>sp|Q75BD8|DIB1_ASHGO Spliceosomal protein DIB1 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DIB1 PE=3 SV=1
Length = 143
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 95/113 (84%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFR 104
VIRFG D D +CM MDE+LYSIAEKV NFA IY+ D T+VPDFN+MYEL DP T MFF++
Sbjct: 28 VIRFGSDSDRSCMLMDEILYSIAEKVVNFAAIYVCDTTEVPDFNEMYELQDPMTVMFFYK 87
Query: 105 NKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTK 157
NKH+ D GTGNNNK+N+ +++KQEMIDI+ETV+RGAR+ +GLVVSP DY+ K
Sbjct: 88 NKHMRCDFGTGNNNKMNFVVDNKQEMIDIIETVFRGARRNKGLVVSPYDYNYK 140
>sp|Q06819|DIB1_YEAST Spliceosomal protein DIB1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DIB1 PE=1 SV=1
Length = 143
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 93/113 (82%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFR 104
VIRFG D CM MDE+L SIAE+V+NFAVIYL DI +V DF++MYEL DP T MFF+
Sbjct: 28 VIRFGRKNDRQCMIMDELLSSIAERVRNFAVIYLCDIDEVSDFDEMYELTDPMTVMFFYH 87
Query: 105 NKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTK 157
NKH+M D GTGNNNK+N+ ++DKQEMIDI+ET++RGARK +GLVVSP DY+ K
Sbjct: 88 NKHMMCDFGTGNNNKLNFIVDDKQEMIDILETIFRGARKNKGLVVSPYDYNHK 140
>sp|Q6FMI2|DIB1_CANGA Spliceosomal protein DIB1 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DIB1 PE=3
SV=1
Length = 142
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 89/113 (78%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFR 104
V+RFG D CM MDE+L S+AEKV+NF IYL DI +VPDFN MYEL D MFF++
Sbjct: 26 VVRFGRTADRECMLMDEMLASVAEKVRNFVAIYLCDIDEVPDFNDMYELNDNMCLMFFYK 85
Query: 105 NKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTK 157
NKH+M D GTGNNNK+N+ +DKQE+IDI+ET++RGARK +G+VVSP DY+ K
Sbjct: 86 NKHMMCDFGTGNNNKMNFLPDDKQELIDIMETIFRGARKNKGIVVSPYDYNHK 138
>sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B OS=Homo sapiens GN=TXNL4B PE=1 SV=1
Length = 149
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 71/110 (64%), Gaps = 2/110 (1%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYEL-YDPCTCMFFF 103
V+RFG D DP C+++D++L + + A IYLVD+ + + + +++ Y P T +FFF
Sbjct: 27 VLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPST-VFFF 85
Query: 104 RNKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRGLVVSPKD 153
+H+ +D G+ ++ K + + KQ+ ID++E +YRGA +G+ +V SP D
Sbjct: 86 NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAMRGKLIVQSPID 135
>sp|Q8BUH1|TXN4B_MOUSE Thioredoxin-like protein 4B OS=Mus musculus GN=Txnl4b PE=2 SV=1
Length = 149
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYEL-YDPCTCMFFF 103
V+RFG D DP C+++D++L + + A IYL D+ P + + +++ Y P T +FFF
Sbjct: 27 VLRFGRDEDPVCLQLDDILSKTSADLSKMAAIYLGDVDHTPVYTQYFDISYIPST-VFFF 85
Query: 104 RNKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRGLVVSPKD 153
+H+ D G+ ++ K + + KQ+ ID++E +YRGA +G+ +V SP D
Sbjct: 86 NGQHMKGDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAMRGKLIVQSPID 135
>sp|P34714|SPRC_CAEEL SPARC OS=Caenorhabditis elegans GN=ost-1 PE=1 SV=1
Length = 264
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 1 MALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIEDQC 42
+ +E CI PFL CDA++D I++KEW +CL L E EI+++C
Sbjct: 223 IPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264
>sp|P23499|SPRL1_COTJA SPARC-like protein 1 OS=Coturnix coturnix japonica GN=SPARCL1 PE=2
SV=1
Length = 676
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 3 LEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIED 40
+EHCI F +CD D D LITLKEW C + E++I +
Sbjct: 635 MEHCITRFFQECDGDQDKLITLKEWCHCFAIKEEDINE 672
>sp|P24054|SPRL1_RAT SPARC-like protein 1 OS=Rattus norvegicus GN=Sparcl1 PE=2 SV=1
Length = 634
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 3 LEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIED 40
+EHCI F +CD + D ITLKEW C + E++I++
Sbjct: 593 MEHCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDE 630
>sp|P70663|SPRL1_MOUSE SPARC-like protein 1 OS=Mus musculus GN=Sparcl1 PE=1 SV=3
Length = 650
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 3 LEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIED 40
+EHCI F +CD + D ITLKEW C + E++I++
Sbjct: 609 MEHCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDE 646
>sp|Q14515|SPRL1_HUMAN SPARC-like protein 1 OS=Homo sapiens GN=SPARCL1 PE=1 SV=2
Length = 664
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 3 LEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIED 40
+EHCI F +CD + D ITLKEW C + E++I++
Sbjct: 623 MEHCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDE 660
>sp|P36378|SPRC_XENLA SPARC OS=Xenopus laevis GN=sparc PE=1 SV=1
Length = 300
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 1 MALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 39
+ +EHC F ++CD DDD I L+EWA+C + E +++
Sbjct: 257 IPMEHCTTRFFDECDIDDDKYIALEEWAKCFGIKEQDVD 295
>sp|O76003|GLRX3_HUMAN Glutaredoxin-3 OS=Homo sapiens GN=GLRX3 PE=1 SV=2
Length = 335
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFR 104
V+ F W P C +M+EV+ +A+++ + + L + VP+ ++ YE+ T +FF
Sbjct: 35 VVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKL-EAEGVPEVSEKYEISSVPTFLFFKN 93
Query: 105 NKHI 108
++ I
Sbjct: 94 SQKI 97
>sp|O93390|SPRC_COTJA SPARC OS=Coturnix coturnix japonica GN=SPARC PE=2 SV=1
Length = 298
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 1 MALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 39
+ +EHC F CD D+D I L+EWA C + E +I+
Sbjct: 255 IPMEHCTTRFFEACDLDNDKYIALEEWASCFGIKEKDID 293
>sp|P16975|SPRC_RAT SPARC OS=Rattus norvegicus GN=Sparc PE=1 SV=4
Length = 301
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 1 MALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEI 38
+ +EHC F CD D+D I L+EWA C + E +I
Sbjct: 258 IPMEHCTTRFFETCDLDNDKYIALEEWAGCFGIKEQDI 295
>sp|P07214|SPRC_MOUSE SPARC OS=Mus musculus GN=Sparc PE=1 SV=1
Length = 302
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 1 MALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEI 38
+ +EHC F CD D+D I L+EWA C + E +I
Sbjct: 259 IPMEHCTTRFFETCDLDNDKYIALEEWAGCFGIKEQDI 296
>sp|P20112|SPRC_PIG SPARC OS=Sus scrofa GN=SPARC PE=1 SV=2
Length = 300
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 1 MALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 39
+ +EHC F CD D+D I L EWA C + E +I+
Sbjct: 257 IPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDID 295
>sp|P13213|SPRC_BOVIN SPARC OS=Bos taurus GN=SPARC PE=1 SV=2
Length = 303
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 1 MALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 39
+ +EHC F CD D+D I L EWA C + E +I+
Sbjct: 260 IPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKEKDID 298
>sp|P36377|SPRC_CHICK SPARC OS=Gallus gallus GN=SPARC PE=2 SV=1
Length = 298
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 1 MALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 39
+ +EHC F CD D D I L+EWA C + E +I+
Sbjct: 255 IPMEHCTTRFFEACDLDFDKYIALEEWASCFGIKEQDID 293
>sp|Q28ID3|GLRX3_XENTR Glutaredoxin-3 OS=Xenopus tropicalis GN=glrx3 PE=2 SV=2
Length = 326
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFR 104
V+ F W P C +M+EV+ +A++ + L + VP+ ++ YE+ T +FF
Sbjct: 26 VVHFWAPWAPQCTQMNEVMAELAKEQPQVMFVKL-EAEAVPEVSEKYEVTSVPTFLFFKN 84
Query: 105 NKHI 108
++ I
Sbjct: 85 SQKI 88
>sp|Q5R767|SPRC_PONAB SPARC OS=Pongo abelii GN=SPARC PE=2 SV=1
Length = 303
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 1 MALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 39
+ +EHC F CD D+D I L EWA C + + +I+
Sbjct: 260 IPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDID 298
>sp|P09486|SPRC_HUMAN SPARC OS=Homo sapiens GN=SPARC PE=1 SV=1
Length = 303
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 1 MALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 39
+ +EHC F CD D+D I L EWA C + + +I+
Sbjct: 260 IPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDID 298
>sp|Q9CQM9|GLRX3_MOUSE Glutaredoxin-3 OS=Mus musculus GN=Glrx3 PE=1 SV=1
Length = 337
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFR 104
V+ F W P C++M++V+ +A++ + + + L + VP+ ++ YE+ T +FF
Sbjct: 37 VVHFWAPWAPQCVQMNDVMAELAKEHPHVSFVKL-EAEAVPEVSEKYEISSVPTFLFFKN 95
Query: 105 NKHI 108
++ +
Sbjct: 96 SQKV 99
>sp|Q9JLZ1|GLRX3_RAT Glutaredoxin-3 OS=Rattus norvegicus GN=Glrx3 PE=1 SV=2
Length = 337
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFR 104
V+ F W P C++M++V+ +A++ + + + L + VP+ ++ YE+ T +FF
Sbjct: 37 VVHFWAPWAPQCVQMNDVMAELAKEHPHVSFVKL-EAEAVPEVSEKYEISSVPTFLFFKN 95
Query: 105 NKHI 108
++ +
Sbjct: 96 SQKV 99
>sp|P47938|THIO1_DROME Thioredoxin-1 OS=Drosophila melanogaster GN=dhd PE=1 SV=1
Length = 107
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFR 104
V+ F W C +M+ + S+A K + AV+ +D+ K + + Y++ T +F +
Sbjct: 23 VLDFYATWCGPCKEMESTVKSLARKYSSKAVVLKIDVDKFEELTERYKVRSMPTFVFLRQ 82
Query: 105 NKHIMIDLGTGNNNKIN 121
N+ + G + N
Sbjct: 83 NRRLASFAGADEHKLTN 99
>sp|Q9BQ16|TICN3_HUMAN Testican-3 OS=Homo sapiens GN=SPOCK3 PE=1 SV=2
Length = 436
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 4 EHCIAPFLNKCDADDDHLITLKEWARCLELNED 36
E C F N CD D LI+ EW C + +D
Sbjct: 282 EQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQD 314
>sp|Q5RD69|TICN3_PONAB Testican-3 OS=Pongo abelii GN=SPOCK3 PE=2 SV=2
Length = 436
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 4 EHCIAPFLNKCDADDDHLITLKEWARCLELNED 36
E C F N CD D LI+ EW C + +D
Sbjct: 282 EQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQD 314
>sp|Q8BKV0|TICN3_MOUSE Testican-3 OS=Mus musculus GN=Spock3 PE=2 SV=2
Length = 436
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 4 EHCIAPFLNKCDADDDHLITLKEWARCLELNED 36
E C F N CD D LI+ EW C + +D
Sbjct: 282 EQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQD 314
>sp|P60226|THIO1_DROYA Thioredoxin-1 OS=Drosophila yakuba GN=dhd PE=2 SV=2
Length = 107
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFR 104
V+ F +W C M+ + S+A K AV+ +D+ K + + Y++ T +F
Sbjct: 23 VLDFYANWCGPCKDMESTVKSLARKYSTKAVVLKIDVDKFEELTERYKVRSMPTFVFLRN 82
Query: 105 NKHIMIDLGTGNNNKIN 121
N+ + G + N
Sbjct: 83 NRRLAAFSGADEHKLTN 99
>sp|A4WH24|DNLI_PYRAR DNA ligase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM
11321) GN=lig PE=3 SV=1
Length = 584
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 54 PTCMKMDEVLYSIAEKVKNFAVIY----LVDITKVPDFNKM--YELYD-PCTCMFFF--- 103
PT + + +++Y E + N +IY L +I D ++ ++++D P T FF
Sbjct: 335 PTVLYLFDIVYVDGEDLTNEPLIYRRVKLSEIVHESDKVQIAKWQMFDDPDTVDVFFHEA 394
Query: 104 ----------RNKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRG 146
++ ++G N I + + K EMID V+ V GA GRG
Sbjct: 395 VSVGTEGLICKSPTSEYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRG 447
>sp|Q9ER58|TICN2_MOUSE Testican-2 OS=Mus musculus GN=Spock2 PE=2 SV=1
Length = 423
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 4 EHCIAPFLNKCDADDDHLITLKEWARCL 31
E CI PF N CD D ++ EW C
Sbjct: 278 EVCIRPFFNSCDTYKDGRVSTAEWCFCF 305
>sp|Q92563|TICN2_HUMAN Testican-2 OS=Homo sapiens GN=SPOCK2 PE=1 SV=1
Length = 424
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 4 EHCIAPFLNKCDADDDHLITLKEWARCL 31
E CI PF N CD D ++ EW C
Sbjct: 279 EVCIRPFFNSCDTYKDGRVSTAEWCFCF 306
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,540,116
Number of Sequences: 539616
Number of extensions: 2821772
Number of successful extensions: 6420
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6384
Number of HSP's gapped (non-prelim): 42
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)