Query psy4160
Match_columns 160
No_of_seqs 135 out of 167
Neff 3.6
Searched_HMMs 29240
Date Fri Aug 16 18:27:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4160.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4160hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2av4_A Thioredoxin-like protei 100.0 8.3E-42 2.8E-46 271.6 10.7 118 43-160 43-160 (160)
2 1qgv_A Spliceosomal protein U5 99.9 2.9E-24 9.8E-29 159.1 10.2 118 43-160 25-142 (142)
3 3gix_A Thioredoxin-like protei 99.9 2.8E-23 9.6E-28 154.8 10.4 118 43-160 25-142 (149)
4 3m9j_A Thioredoxin; oxidoreduc 98.1 1.3E-05 4.3E-10 53.2 7.0 81 44-136 23-103 (105)
5 3tco_A Thioredoxin (TRXA-1); d 98.0 4.7E-05 1.6E-09 50.3 8.6 85 43-137 23-107 (109)
6 3zzx_A Thioredoxin; oxidoreduc 97.9 2.6E-05 9E-10 54.9 7.1 81 44-136 23-103 (105)
7 4euy_A Uncharacterized protein 97.9 2.4E-05 8.1E-10 52.9 6.4 85 43-138 20-104 (105)
8 3gnj_A Thioredoxin domain prot 97.9 5.5E-05 1.9E-09 50.5 7.9 85 43-137 24-108 (111)
9 3qfa_C Thioredoxin; protein-pr 97.9 2.8E-05 9.7E-10 54.0 5.9 82 43-136 33-114 (116)
10 3f3q_A Thioredoxin-1; His TAG, 97.8 6.7E-05 2.3E-09 51.4 7.1 82 43-136 26-107 (109)
11 2e0q_A Thioredoxin; electron t 97.8 0.00018 6.1E-09 46.8 8.7 84 43-137 18-101 (104)
12 1ep7_A Thioredoxin CH1, H-type 97.7 0.00015 5.1E-09 48.6 7.4 84 43-137 26-109 (112)
13 2vlu_A Thioredoxin, thioredoxi 97.7 0.00011 3.8E-09 50.3 6.7 83 43-137 36-118 (122)
14 2trx_A Thioredoxin; electron t 97.7 0.00029 9.9E-09 46.9 8.5 85 43-137 22-106 (108)
15 2i4a_A Thioredoxin; acidophIle 97.7 0.00027 9.2E-09 46.6 8.1 84 43-136 22-105 (107)
16 1xwb_A Thioredoxin; dimerizati 97.7 0.00023 7.9E-09 46.9 7.8 82 44-136 23-104 (106)
17 3hz4_A Thioredoxin; NYSGXRC, P 97.7 0.00013 4.3E-09 52.2 6.8 92 43-144 26-117 (140)
18 2j23_A Thioredoxin; immune pro 97.7 8.1E-05 2.8E-09 51.9 5.6 84 43-137 35-119 (121)
19 2yzu_A Thioredoxin; redox prot 97.6 0.00026 9E-09 46.5 7.6 85 43-137 20-104 (109)
20 1fb6_A Thioredoxin M; electron 97.6 0.00036 1.2E-08 45.8 7.6 84 43-136 20-103 (105)
21 1v98_A Thioredoxin; oxidoreduc 97.6 0.00038 1.3E-08 49.2 8.2 85 44-138 53-137 (140)
22 3die_A Thioredoxin, TRX; elect 97.6 0.00021 7.3E-09 47.1 6.4 83 43-135 21-103 (106)
23 1syr_A Thioredoxin; SGPP, stru 97.5 0.0002 6.8E-09 48.8 6.3 82 43-136 28-109 (112)
24 3aps_A DNAJ homolog subfamily 97.5 0.00028 9.5E-09 48.3 7.0 92 43-143 23-117 (122)
25 1t00_A Thioredoxin, TRX; redox 97.5 0.00038 1.3E-08 46.7 7.4 85 43-137 25-109 (112)
26 1gh2_A Thioredoxin-like protei 97.5 0.00017 5.9E-09 48.4 5.6 61 43-105 23-83 (107)
27 3hxs_A Thioredoxin, TRXP; elec 97.5 0.00027 9.3E-09 49.6 6.8 85 43-137 53-137 (141)
28 1thx_A Thioredoxin, thioredoxi 97.5 0.00054 1.8E-08 45.7 7.9 85 43-137 27-111 (115)
29 1r26_A Thioredoxin; redox-acti 97.5 0.00034 1.2E-08 49.7 7.3 83 43-137 39-121 (125)
30 1dby_A Chloroplast thioredoxin 97.5 0.00048 1.6E-08 45.7 7.5 85 43-137 21-105 (107)
31 3p2a_A Thioredoxin 2, putative 97.5 0.00045 1.5E-08 49.3 7.8 86 44-139 58-143 (148)
32 2oe3_A Thioredoxin-3; electron 97.5 0.00031 1E-08 48.8 6.7 81 43-135 32-112 (114)
33 3ul3_B Thioredoxin, thioredoxi 97.5 0.00024 8.2E-09 49.7 5.9 63 44-107 45-107 (128)
34 2vim_A Thioredoxin, TRX; thior 97.4 0.00029 1E-08 46.2 5.7 81 44-136 22-102 (104)
35 2dj0_A Thioredoxin-related tra 97.4 0.00035 1.2E-08 49.4 6.5 88 44-131 29-123 (137)
36 1w4v_A Thioredoxin, mitochondr 97.4 0.00078 2.7E-08 46.5 8.0 85 43-137 33-117 (119)
37 3d22_A TRXH4, thioredoxin H-ty 97.4 0.00053 1.8E-08 48.1 7.1 86 43-140 48-133 (139)
38 1ti3_A Thioredoxin H, PTTRXH1; 97.4 0.00087 3E-08 44.7 7.8 83 44-138 29-111 (113)
39 2dj1_A Protein disulfide-isome 97.4 0.00076 2.6E-08 47.1 7.6 88 43-141 36-126 (140)
40 2o8v_B Thioredoxin 1; disulfid 97.4 0.0014 4.7E-08 46.5 9.0 85 43-137 42-126 (128)
41 2dml_A Protein disulfide-isome 97.4 0.00018 6E-09 49.8 4.1 87 43-138 37-123 (130)
42 2vm1_A Thioredoxin, thioredoxi 97.3 0.00074 2.5E-08 45.4 7.0 87 43-141 30-116 (118)
43 3uvt_A Thioredoxin domain-cont 97.3 0.0007 2.4E-08 44.9 6.4 65 43-107 23-90 (111)
44 3fk8_A Disulphide isomerase; A 97.3 0.0003 1E-08 49.1 4.6 91 44-137 32-131 (133)
45 2i1u_A Thioredoxin, TRX, MPT46 97.3 0.00067 2.3E-08 45.9 6.1 64 43-106 32-95 (121)
46 2dj3_A Protein disulfide-isome 97.3 0.0013 4.5E-08 45.4 7.7 92 43-141 27-120 (133)
47 2l57_A Uncharacterized protein 97.2 0.001 3.5E-08 45.9 6.9 93 43-144 28-122 (126)
48 2ppt_A Thioredoxin-2; thiredox 97.2 0.0014 4.8E-08 48.3 8.0 85 43-137 66-150 (155)
49 1nsw_A Thioredoxin, TRX; therm 97.2 0.00079 2.7E-08 44.5 5.9 62 43-105 19-80 (105)
50 3evi_A Phosducin-like protein 97.2 0.00052 1.8E-08 49.8 5.3 62 43-108 25-86 (118)
51 1fo5_A Thioredoxin; disulfide 97.2 0.0013 4.6E-08 41.8 6.6 79 44-136 5-83 (85)
52 1nho_A Probable thioredoxin; b 97.2 0.0018 6.2E-08 41.1 7.3 80 44-137 4-83 (85)
53 1x5d_A Protein disulfide-isome 97.2 0.00095 3.2E-08 45.9 6.1 88 43-140 27-118 (133)
54 1mek_A Protein disulfide isome 97.2 0.00055 1.9E-08 45.7 4.7 87 43-137 26-115 (120)
55 2f51_A Thioredoxin; electron t 97.1 0.00083 2.8E-08 46.7 5.5 59 43-102 25-83 (118)
56 1x5e_A Thioredoxin domain cont 97.1 0.0021 7.3E-08 44.3 7.6 82 44-136 25-107 (126)
57 3d6i_A Monothiol glutaredoxin- 97.1 0.00076 2.6E-08 45.4 5.1 84 43-138 23-108 (112)
58 3dxb_A Thioredoxin N-terminall 97.1 0.0036 1.2E-07 48.2 9.5 89 43-141 32-120 (222)
59 1faa_A Thioredoxin F; electron 97.1 0.002 6.7E-08 44.2 7.2 82 43-136 39-121 (124)
60 3dml_A Putative uncharacterize 97.1 0.00045 1.5E-08 51.3 4.0 98 37-144 14-115 (116)
61 2voc_A Thioredoxin; electron t 97.1 0.0017 5.9E-08 44.1 6.7 84 43-136 19-102 (112)
62 3h79_A Thioredoxin-like protei 97.0 0.001 3.4E-08 46.3 5.1 84 43-135 35-124 (127)
63 1xfl_A Thioredoxin H1; AT3G510 97.0 0.0032 1.1E-07 44.2 7.7 83 43-137 40-122 (124)
64 2xc2_A Thioredoxinn; oxidoredu 97.0 0.0026 9E-08 43.3 6.7 80 44-136 36-115 (117)
65 1wmj_A Thioredoxin H-type; str 96.9 0.00073 2.5E-08 46.3 3.6 87 43-141 38-124 (130)
66 2l5l_A Thioredoxin; structural 96.9 0.0037 1.3E-07 44.1 7.3 85 43-137 40-124 (136)
67 3apq_A DNAJ homolog subfamily 96.9 0.0029 9.9E-08 48.1 6.9 86 43-138 116-201 (210)
68 2pu9_C TRX-F, thioredoxin F-ty 96.8 0.0022 7.5E-08 43.1 5.1 83 43-137 26-109 (111)
69 3emx_A Thioredoxin; structural 96.8 0.0012 4.2E-08 46.9 3.9 90 43-144 33-131 (135)
70 2qsi_A Putative hydrogenase ex 96.8 0.0014 4.8E-08 50.1 4.5 86 43-138 35-122 (137)
71 3qou_A Protein YBBN; thioredox 96.7 0.0028 9.5E-08 49.8 6.3 64 43-106 28-91 (287)
72 2wz9_A Glutaredoxin-3; protein 96.7 0.0026 9E-08 46.0 5.5 88 43-142 34-121 (153)
73 2dbc_A PDCL2, unnamed protein 96.7 0.003 1E-07 45.2 5.7 88 43-137 32-119 (135)
74 3cxg_A Putative thioredoxin; m 96.7 0.0019 6.5E-08 46.0 4.6 85 43-138 42-128 (133)
75 2l6c_A Thioredoxin; oxidoreduc 96.5 0.0027 9.2E-08 43.3 4.3 83 43-136 21-103 (110)
76 3idv_A Protein disulfide-isome 96.5 0.0033 1.1E-07 47.4 5.1 84 43-137 149-235 (241)
77 2djj_A PDI, protein disulfide- 96.5 0.0079 2.7E-07 40.7 6.3 83 43-136 27-114 (121)
78 1sen_A Thioredoxin-like protei 96.4 0.0013 4.5E-08 48.8 2.4 98 43-140 48-149 (164)
79 1oaz_A Thioredoxin 1; immune s 96.4 0.0038 1.3E-07 44.0 4.7 83 43-135 23-119 (123)
80 2yj7_A LPBCA thioredoxin; oxid 95.3 0.0006 2.1E-08 44.4 0.0 60 43-102 21-80 (106)
81 3f9u_A Putative exported cytoc 96.3 0.0064 2.2E-07 44.3 5.2 93 44-145 50-172 (172)
82 1zma_A Bacterocin transport ac 96.1 0.012 4.2E-07 40.1 5.7 63 43-108 31-99 (118)
83 3idv_A Protein disulfide-isome 96.1 0.0071 2.4E-07 45.5 4.9 87 43-140 34-123 (241)
84 2qgv_A Hydrogenase-1 operon pr 96.1 0.0069 2.4E-07 46.4 4.7 86 43-138 36-124 (140)
85 1a8l_A Protein disulfide oxido 96.0 0.029 1E-06 42.1 7.9 83 45-137 138-224 (226)
86 1wou_A Thioredoxin -related pr 96.0 0.0051 1.7E-07 43.0 3.4 62 43-105 26-101 (123)
87 2fwh_A Thiol:disulfide interch 95.9 0.0053 1.8E-07 43.4 3.1 84 43-136 33-125 (134)
88 1a0r_P Phosducin, MEKA, PP33; 95.9 0.0078 2.7E-07 49.1 4.6 62 43-107 135-196 (245)
89 3ph9_A Anterior gradient prote 95.9 0.0072 2.5E-07 45.7 4.1 96 44-142 47-148 (151)
90 3q6o_A Sulfhydryl oxidase 1; p 95.8 0.016 5.4E-07 44.8 5.8 61 43-103 32-97 (244)
91 2kuc_A Putative disulphide-iso 95.8 0.027 9.3E-07 38.5 6.3 86 43-137 29-119 (130)
92 2lrn_A Thiol:disulfide interch 95.4 0.099 3.4E-06 36.7 8.2 89 43-144 31-146 (152)
93 3ed3_A Protein disulfide-isome 95.3 0.031 1.1E-06 45.7 6.0 63 44-106 38-102 (298)
94 3ga4_A Dolichyl-diphosphooligo 95.2 0.029 1E-06 44.1 5.5 62 44-105 40-113 (178)
95 2lst_A Thioredoxin; structural 94.2 0.0033 1.1E-07 43.4 0.0 94 43-144 21-121 (130)
96 2r2j_A Thioredoxin domain-cont 94.9 0.043 1.5E-06 45.6 5.9 70 43-112 24-99 (382)
97 1a8l_A Protein disulfide oxido 94.9 0.072 2.5E-06 39.9 6.6 85 45-139 26-113 (226)
98 3f8u_A Protein disulfide-isome 94.7 0.033 1.1E-06 47.0 4.8 68 43-111 23-90 (481)
99 2ju5_A Thioredoxin disulfide i 94.5 0.12 4.2E-06 37.3 7.0 86 44-138 50-151 (154)
100 2trc_P Phosducin, MEKA, PP33; 94.5 0.033 1.1E-06 43.9 4.0 63 43-108 122-184 (217)
101 2djk_A PDI, protein disulfide- 94.4 0.13 4.4E-06 36.5 6.7 88 44-141 26-117 (133)
102 3hcz_A Possible thiol-disulfid 94.4 0.15 5.3E-06 34.8 6.9 43 44-86 34-77 (148)
103 3ira_A Conserved protein; meth 94.3 0.062 2.1E-06 41.7 5.2 59 44-102 42-111 (173)
104 2b5e_A Protein disulfide-isome 94.2 0.048 1.6E-06 46.5 4.7 64 43-107 33-97 (504)
105 2es7_A Q8ZP25_salty, putative 94.2 0.014 4.7E-07 43.1 1.1 85 43-138 36-124 (142)
106 2b5x_A YKUV protein, TRXY; thi 94.1 0.29 1E-05 33.2 7.7 39 44-82 32-70 (148)
107 2fgx_A Putative thioredoxin; N 94.0 0.032 1.1E-06 40.5 2.8 62 44-108 31-92 (107)
108 1ego_A Glutaredoxin; electron 94.0 0.047 1.6E-06 35.0 3.3 75 45-138 3-83 (85)
109 1z6n_A Hypothetical protein PA 93.8 0.22 7.5E-06 37.8 7.3 84 23-108 31-123 (167)
110 3kp8_A Vkorc1/thioredoxin doma 93.6 0.028 9.7E-07 39.3 1.9 52 44-101 15-72 (106)
111 3apo_A DNAJ homolog subfamily 93.6 0.066 2.3E-06 48.2 4.7 69 43-112 135-203 (780)
112 3f8u_A Protein disulfide-isome 93.4 0.21 7.1E-06 42.1 7.2 85 44-137 373-459 (481)
113 2ywm_A Glutaredoxin-like prote 93.2 0.2 6.8E-06 37.8 6.1 84 45-142 140-223 (229)
114 3apo_A DNAJ homolog subfamily 93.1 0.21 7.2E-06 45.0 7.2 88 44-140 678-768 (780)
115 3qcp_A QSOX from trypanosoma b 93.1 0.21 7.3E-06 44.8 7.1 94 44-137 45-150 (470)
116 1lu4_A Soluble secreted antige 93.0 0.32 1.1E-05 32.6 6.4 83 44-137 27-134 (136)
117 3t58_A Sulfhydryl oxidase 1; o 93.0 0.14 4.9E-06 45.6 5.9 61 43-103 32-97 (519)
118 2dlx_A UBX domain-containing p 92.7 0.49 1.7E-05 35.8 7.7 98 44-151 45-148 (153)
119 3fkf_A Thiol-disulfide oxidore 92.6 0.47 1.6E-05 32.2 6.9 84 43-138 35-145 (148)
120 2lja_A Putative thiol-disulfid 92.6 0.94 3.2E-05 31.2 8.5 90 44-142 33-146 (152)
121 2f9s_A Thiol-disulfide oxidore 92.5 0.56 1.9E-05 32.5 7.2 90 43-142 28-141 (151)
122 2ywi_A Hypothetical conserved 92.4 0.55 1.9E-05 34.1 7.4 96 44-141 49-176 (196)
123 3gl3_A Putative thiol:disulfid 92.3 0.82 2.8E-05 31.5 7.9 43 43-85 30-73 (152)
124 3or5_A Thiol:disulfide interch 92.2 0.84 2.9E-05 31.8 7.9 42 44-85 37-79 (165)
125 3li6_A Calcium-binding protein 92.1 0.086 2.9E-06 31.9 2.3 25 7-31 38-62 (66)
126 3fw2_A Thiol-disulfide oxidore 91.9 0.93 3.2E-05 31.6 7.9 85 43-139 35-148 (150)
127 3ia1_A THIO-disulfide isomeras 91.8 0.56 1.9E-05 32.5 6.6 92 43-145 32-150 (154)
128 2hls_A Protein disulfide oxido 91.7 0.8 2.8E-05 36.0 8.1 88 45-146 142-233 (243)
129 3raz_A Thioredoxin-related pro 91.5 0.99 3.4E-05 31.5 7.6 93 44-146 27-147 (151)
130 1tiz_A Calmodulin-related prot 91.4 0.098 3.4E-06 31.5 2.0 25 7-31 39-63 (67)
131 1zzo_A RV1677; thioredoxin fol 91.3 0.69 2.4E-05 30.7 6.4 38 44-82 28-65 (136)
132 2ywm_A Glutaredoxin-like prote 91.0 0.95 3.3E-05 34.0 7.6 85 45-139 24-115 (229)
133 1ilo_A Conserved hypothetical 90.8 0.38 1.3E-05 29.8 4.4 58 46-108 4-61 (77)
134 2hls_A Protein disulfide oxido 90.8 0.46 1.6E-05 37.4 5.9 83 44-139 28-117 (243)
135 2b5e_A Protein disulfide-isome 90.7 0.56 1.9E-05 39.9 6.7 84 44-137 379-465 (504)
136 3kcm_A Thioredoxin family prot 90.5 0.86 2.9E-05 31.5 6.5 42 43-84 30-72 (154)
137 1tiz_A Calmodulin-related prot 90.4 0.14 4.9E-06 30.8 2.1 25 7-31 3-27 (67)
138 3uem_A Protein disulfide-isome 90.4 0.86 3E-05 36.7 7.3 60 44-105 270-331 (361)
139 1k9u_A Polcalcin PHL P 7; poll 90.3 0.19 6.3E-06 31.6 2.6 25 7-31 5-29 (78)
140 1yx7_A Calsensin, LAN3-6 antig 89.8 0.81 2.8E-05 28.7 5.4 26 6-31 8-33 (83)
141 3li6_A Calcium-binding protein 89.8 0.16 5.6E-06 30.6 2.0 24 8-31 3-26 (66)
142 3ha9_A Uncharacterized thiored 89.6 1.6 5.3E-05 30.8 7.3 38 44-82 40-77 (165)
143 3erw_A Sporulation thiol-disul 89.3 1 3.5E-05 30.3 5.9 40 44-83 37-77 (145)
144 1cb1_A Calbindin D9K; calcium- 88.7 0.23 8E-06 30.8 2.2 25 7-31 49-73 (78)
145 1i5g_A Tryparedoxin II; electr 88.7 0.82 2.8E-05 31.5 5.2 41 43-83 30-72 (144)
146 2bl0_B Myosin regulatory light 88.6 0.18 6.2E-06 34.1 1.7 25 7-31 7-31 (145)
147 3lwa_A Secreted thiol-disulfid 88.6 1.9 6.5E-05 31.1 7.3 41 43-83 61-108 (183)
148 1sji_A Calsequestrin 2, calseq 88.5 0.39 1.3E-05 39.1 3.9 63 43-106 30-100 (350)
149 2e7p_A Glutaredoxin; thioredox 88.3 0.27 9.2E-06 33.1 2.4 55 44-107 22-83 (116)
150 2b1u_A Calmodulin-like protein 88.2 0.3 1E-05 29.7 2.4 25 7-31 8-32 (71)
151 2b1u_A Calmodulin-like protein 87.8 0.22 7.4E-06 30.4 1.6 25 7-31 44-68 (71)
152 1k9u_A Polcalcin PHL P 7; poll 87.8 0.28 9.6E-06 30.7 2.1 25 8-32 41-65 (78)
153 1jfj_A Ehcabp, calcium-binding 87.7 0.25 8.6E-06 32.6 1.9 25 7-31 2-26 (134)
154 2opo_A Polcalcin CHE A 3; calc 87.7 0.33 1.1E-05 31.0 2.4 26 7-32 13-38 (86)
155 1snl_A Nucleobindin 1, calnuc; 87.7 0.26 9E-06 33.3 2.1 24 7-30 74-97 (103)
156 1q80_A SCP, sarcoplasmic calci 87.6 0.47 1.6E-05 33.1 3.4 27 5-31 94-120 (174)
157 2l5o_A Putative thioredoxin; s 87.5 2.5 8.7E-05 29.0 7.1 88 44-141 31-143 (153)
158 2pmy_A RAS and EF-hand domain- 87.5 0.29 9.8E-06 32.3 2.1 25 7-31 29-53 (91)
159 3hdc_A Thioredoxin family prot 87.5 1 3.6E-05 31.7 5.2 41 43-83 43-84 (158)
160 3s9f_A Tryparedoxin; thioredox 87.5 0.85 2.9E-05 33.1 4.8 41 44-84 51-93 (165)
161 2joj_A Centrin protein; N-term 87.4 0.27 9.2E-06 30.5 1.9 25 7-31 45-69 (77)
162 1o73_A Tryparedoxin; electron 87.0 1.1 3.8E-05 30.7 5.0 41 43-83 30-72 (144)
163 4evm_A Thioredoxin family prot 87.0 3 0.0001 27.3 7.0 36 44-79 25-60 (138)
164 1ggw_A Protein (CDC4P); light 86.8 0.37 1.3E-05 32.7 2.4 25 7-31 7-31 (140)
165 3j04_B Myosin regulatory light 86.7 0.44 1.5E-05 32.4 2.7 25 7-31 9-33 (143)
166 1o8x_A Tryparedoxin, TRYX, TXN 86.6 1.3 4.4E-05 30.7 5.2 41 43-83 30-72 (146)
167 1qls_A S100C protein, calgizza 86.4 0.41 1.4E-05 31.4 2.4 25 7-31 58-82 (99)
168 1kng_A Thiol:disulfide interch 86.3 1.4 4.8E-05 30.3 5.3 36 44-81 45-80 (156)
169 1qx2_A Vitamin D-dependent cal 86.3 0.39 1.3E-05 29.6 2.1 25 7-31 47-71 (76)
170 2pmy_A RAS and EF-hand domain- 86.2 0.32 1.1E-05 32.1 1.8 25 7-31 63-87 (91)
171 1yx7_A Calsensin, LAN3-6 antig 86.0 0.47 1.6E-05 29.9 2.5 21 10-30 54-74 (83)
172 1c7v_A CAVP, calcium vector pr 85.9 0.29 9.8E-06 30.9 1.4 25 7-32 11-35 (81)
173 2ktg_A Calmodulin, putative; e 85.7 0.39 1.3E-05 30.4 2.0 24 7-30 52-75 (85)
174 1ttz_A Conserved hypothetical 85.3 0.33 1.1E-05 33.3 1.6 72 45-136 3-74 (87)
175 1wdc_B Scallop myosin; calcium 85.2 0.47 1.6E-05 32.9 2.3 25 7-31 20-44 (156)
176 2cvb_A Probable thiol-disulfid 85.1 3.2 0.00011 30.0 6.9 39 43-81 35-73 (188)
177 2lrt_A Uncharacterized protein 85.1 2.8 9.5E-05 29.6 6.5 44 43-86 37-81 (152)
178 2f2o_A Calmodulin fused with c 85.1 0.43 1.5E-05 33.8 2.1 25 7-31 86-110 (179)
179 2ovk_B RLC, myosin regulatory 85.0 0.47 1.6E-05 32.8 2.2 25 7-31 18-42 (153)
180 2opo_A Polcalcin CHE A 3; calc 84.9 0.44 1.5E-05 30.3 1.9 24 8-31 49-72 (86)
181 3uem_A Protein disulfide-isome 84.9 2 6.9E-05 34.5 6.2 89 45-142 139-233 (361)
182 3khe_A Calmodulin-like domain 84.5 0.97 3.3E-05 32.1 3.8 23 8-30 90-112 (191)
183 1avs_A Troponin C; muscle cont 84.4 0.53 1.8E-05 30.4 2.2 23 8-30 59-81 (90)
184 2kz2_A Calmodulin, CAM; TR2C, 84.4 0.57 2E-05 31.3 2.4 24 7-30 67-90 (94)
185 2joj_A Centrin protein; N-term 84.4 0.47 1.6E-05 29.4 1.9 25 7-31 9-33 (77)
186 2ktg_A Calmodulin, putative; e 84.1 0.61 2.1E-05 29.5 2.3 25 7-31 16-40 (85)
187 2jnf_A Troponin C; stretch act 83.9 0.59 2E-05 32.2 2.4 25 7-31 15-40 (158)
188 1xk4_A Calgranulin A; S100 fam 83.8 0.63 2.2E-05 30.7 2.4 24 8-31 52-75 (93)
189 1qjt_A EH1, epidermal growth f 83.8 0.73 2.5E-05 31.7 2.8 25 7-31 13-37 (99)
190 1q80_A SCP, sarcoplasmic calci 83.7 0.54 1.9E-05 32.8 2.1 25 7-31 8-32 (174)
191 1k2h_A S100A1, S-100 protein, 83.7 0.37 1.3E-05 31.1 1.2 25 7-31 54-78 (93)
192 2lmt_A Calmodulin-related prot 83.7 0.33 1.1E-05 34.2 0.9 24 8-31 13-36 (148)
193 2kn2_A Calmodulin; S MAPK phos 83.5 0.61 2.1E-05 30.0 2.2 25 7-31 47-71 (92)
194 1s6j_A CDPK, calcium-dependent 83.4 0.38 1.3E-05 30.6 1.1 23 8-30 62-84 (87)
195 2d8n_A Recoverin; structural g 83.3 0.64 2.2E-05 34.0 2.4 27 5-31 157-183 (207)
196 1c07_A Protein (epidermal grow 83.2 0.92 3.1E-05 30.6 3.1 25 7-31 12-36 (95)
197 2b1k_A Thiol:disulfide interch 83.1 1.1 3.9E-05 31.6 3.7 34 44-80 54-87 (168)
198 1k8u_A S100A6, calcyclin, CACY 83.1 0.33 1.1E-05 31.0 0.7 25 7-31 53-77 (90)
199 1wjk_A C330018D20RIK protein; 83.1 0.43 1.5E-05 32.7 1.4 58 44-108 18-77 (100)
200 1m45_A MLC1P, myosin light cha 83.1 0.35 1.2E-05 33.1 0.9 25 7-31 6-30 (148)
201 2mys_C Myosin; muscle protein, 83.0 0.69 2.4E-05 31.2 2.4 25 7-31 10-34 (149)
202 1wlz_A DJBP, CAP-binding prote 82.9 0.86 2.9E-05 30.1 2.8 25 7-31 62-86 (105)
203 3rm1_A Protein S100-B; alpha-h 82.8 0.65 2.2E-05 31.1 2.2 25 6-30 53-77 (92)
204 4ds7_A Calmodulin, CAM; protei 82.4 0.62 2.1E-05 31.4 1.9 25 7-31 13-37 (147)
205 1jfu_A Thiol:disulfide interch 82.4 6.5 0.00022 28.1 7.6 40 44-83 63-103 (186)
206 3akb_A Putative calcium bindin 82.2 0.68 2.3E-05 31.8 2.1 25 7-31 6-30 (166)
207 3us3_A Calsequestrin-1; calciu 82.2 1.8 6.2E-05 35.8 5.1 65 43-107 32-103 (367)
208 3mse_B Calcium-dependent prote 82.1 0.67 2.3E-05 33.5 2.1 25 7-31 41-65 (180)
209 1avs_A Troponin C; muscle cont 81.9 1.4 4.9E-05 28.3 3.5 24 8-31 23-46 (90)
210 1zof_A Alkyl hydroperoxide-red 81.8 4.6 0.00016 29.7 6.7 41 43-83 35-77 (198)
211 3qrx_A Centrin; calcium-bindin 81.7 0.73 2.5E-05 32.1 2.2 25 7-31 30-54 (169)
212 2zfd_A Calcineurin B-like prot 81.7 0.89 3E-05 34.3 2.8 26 7-32 168-193 (226)
213 3dtp_E RLC, myosin regulatory 81.6 0.75 2.6E-05 33.9 2.3 26 7-32 59-84 (196)
214 1j7q_A CAVP, calcium vector pr 81.6 0.83 2.8E-05 29.1 2.2 23 7-30 55-77 (86)
215 1jba_A GCAP-2, protein (guanyl 81.6 1.1 3.8E-05 32.7 3.2 26 6-31 149-174 (204)
216 2qc7_A ERP31, ERP28, endoplasm 81.6 2.2 7.4E-05 34.4 5.2 60 43-106 24-94 (240)
217 2sas_A Sarcoplasmic calcium-bi 81.5 0.78 2.7E-05 32.1 2.2 27 5-31 105-131 (185)
218 2lv7_A Calcium-binding protein 81.4 0.98 3.4E-05 31.2 2.7 25 7-31 38-62 (100)
219 1jfj_A Ehcabp, calcium-binding 81.3 1.9 6.5E-05 28.2 4.0 25 7-31 38-62 (134)
220 2hps_A Coelenterazine-binding 81.1 0.85 2.9E-05 32.4 2.4 25 7-31 16-40 (186)
221 3khe_A Calmodulin-like domain 81.1 0.77 2.6E-05 32.7 2.1 26 7-32 42-67 (191)
222 1k94_A Grancalcin; penta-EF-ha 81.1 2.3 8E-05 29.8 4.7 21 10-30 75-95 (165)
223 1top_A Troponin C; contractIle 81.1 0.74 2.5E-05 31.6 2.0 25 7-31 22-46 (162)
224 2r2i_A Guanylyl cyclase-activa 81.1 0.99 3.4E-05 32.8 2.7 28 5-32 131-158 (198)
225 2bl0_C Myosin regulatory light 81.0 1.4 4.8E-05 29.7 3.3 25 7-31 81-105 (142)
226 2mys_B Myosin; muscle protein, 81.0 0.87 3E-05 31.8 2.4 25 7-31 27-51 (166)
227 2sas_A Sarcoplasmic calcium-bi 81.0 0.78 2.7E-05 32.1 2.1 25 7-31 10-35 (185)
228 2d58_A Allograft inflammatory 81.0 1 3.4E-05 30.3 2.6 25 7-31 34-58 (107)
229 3u5r_E Uncharacterized protein 80.9 6.8 0.00023 29.7 7.6 96 43-140 61-188 (218)
230 3fwb_A Cell division control p 80.9 0.79 2.7E-05 31.4 2.1 26 7-32 25-50 (161)
231 2bl0_C Myosin regulatory light 80.6 0.78 2.7E-05 31.0 1.9 25 7-31 8-32 (142)
232 3ox6_A Calcium-binding protein 80.6 0.4 1.4E-05 32.4 0.5 25 7-31 13-37 (153)
233 2hpk_A Photoprotein berovin; s 80.4 1.1 3.6E-05 32.9 2.7 25 7-31 38-62 (208)
234 2aao_A CDPK, calcium-dependent 80.2 1 3.6E-05 31.2 2.5 26 7-32 29-54 (166)
235 2h30_A Thioredoxin, peptide me 80.1 1.3 4.3E-05 30.9 2.9 28 43-70 40-67 (164)
236 3akb_A Putative calcium bindin 80.0 0.97 3.3E-05 31.1 2.3 25 7-31 100-124 (166)
237 1s6i_A CDPK, calcium-dependent 80.0 1 3.5E-05 33.2 2.5 26 7-32 12-37 (188)
238 1s1e_A KV channel interacting 79.9 1.4 5E-05 33.4 3.4 31 5-35 173-203 (224)
239 2znd_A Programmed cell death p 79.9 0.84 2.9E-05 32.3 2.0 28 5-32 7-34 (172)
240 1snl_A Nucleobindin 1, calnuc; 79.8 1 3.5E-05 30.3 2.3 26 6-31 21-46 (103)
241 3iv4_A Putative oxidoreductase 79.7 1.7 5.7E-05 32.1 3.6 64 44-110 27-95 (112)
242 2ehb_A Calcineurin B-like prot 79.7 2.6 9E-05 30.6 4.7 25 7-31 113-137 (207)
243 1y1x_A Leishmania major homolo 79.6 1.2 4E-05 32.6 2.8 28 4-31 26-53 (191)
244 2ccm_A Calexcitin; EF hand, ca 79.6 0.91 3.1E-05 32.5 2.1 23 10-32 69-91 (191)
245 3a4u_B Multiple coagulation fa 79.5 1.6 5.6E-05 31.3 3.4 25 7-31 70-94 (143)
246 2ehb_A Calcineurin B-like prot 79.3 0.93 3.2E-05 33.1 2.1 26 7-32 157-182 (207)
247 2f2o_A Calmodulin fused with c 79.3 1.1 3.7E-05 31.6 2.4 25 7-31 13-37 (179)
248 1wlz_A DJBP, CAP-binding prote 79.3 1.1 3.9E-05 29.5 2.4 25 7-31 26-50 (105)
249 3i5g_B Myosin regulatory light 79.3 1 3.5E-05 32.7 2.3 24 8-31 19-42 (153)
250 3fs7_A Parvalbumin, thymic; ca 79.2 1 3.5E-05 29.7 2.1 25 7-31 44-68 (109)
251 2d58_A Allograft inflammatory 79.1 1 3.4E-05 30.3 2.1 25 7-31 70-94 (107)
252 1c7v_A CAVP, calcium vector pr 78.9 0.65 2.2E-05 29.2 1.0 24 8-31 48-71 (81)
253 3eyt_A Uncharacterized protein 78.7 12 0.00041 25.7 7.7 39 43-81 30-70 (158)
254 3cs1_A Flagellar calcium-bindi 78.7 0.57 2E-05 35.3 0.8 25 7-31 132-156 (219)
255 2kn2_A Calmodulin; S MAPK phos 78.7 1.1 3.8E-05 28.8 2.1 25 7-31 11-35 (92)
256 3h4s_E KCBP interacting Ca2+-b 78.6 0.39 1.3E-05 33.9 -0.1 30 3-32 1-30 (135)
257 1j7q_A CAVP, calcium vector pr 78.4 1.3 4.5E-05 28.1 2.4 25 7-31 16-40 (86)
258 1top_A Troponin C; contractIle 78.3 1.2 4.2E-05 30.5 2.4 25 7-31 98-122 (162)
259 2f33_A Calbindin; EF-hand, Ca2 78.2 3.9 0.00013 30.4 5.3 25 7-31 105-129 (263)
260 1nya_A Calerythrin; EF-hand, m 78.2 1.2 4.1E-05 31.0 2.3 23 7-29 9-31 (176)
261 2kgr_A Intersectin-1; structur 78.0 1.9 6.5E-05 30.1 3.3 26 7-32 16-41 (111)
262 3e3r_A Calcyphosin, calcyphosi 78.0 1.1 3.8E-05 32.2 2.2 25 7-31 154-179 (204)
263 2lvv_A Flagellar calcium-bindi 77.9 1.2 4.1E-05 33.9 2.4 25 7-31 172-196 (226)
264 1exr_A Calmodulin; high resolu 77.9 1.1 3.9E-05 30.8 2.1 25 7-31 12-36 (148)
265 3ll8_B Calcineurin subunit B t 77.8 1.3 4.5E-05 30.1 2.4 26 7-32 40-65 (155)
266 1uul_A Tryparedoxin peroxidase 77.8 8.2 0.00028 28.6 7.0 41 43-83 38-80 (202)
267 1rwy_A Parvalbumin alpha; EF-h 77.8 1.1 3.7E-05 29.5 1.9 25 7-31 43-67 (109)
268 2pvb_A Protein (parvalbumin); 77.7 1.3 4.3E-05 29.2 2.2 25 7-31 43-67 (108)
269 2kz2_A Calmodulin, CAM; TR2C, 77.6 1.4 4.8E-05 29.3 2.4 26 6-31 30-55 (94)
270 1nya_A Calerythrin; EF-hand, m 77.6 1.3 4.3E-05 30.9 2.3 27 5-31 102-128 (176)
271 3e3r_A Calcyphosin, calcyphosi 77.6 1.2 4E-05 32.2 2.2 26 7-32 39-64 (204)
272 3h4s_E KCBP interacting Ca2+-b 77.6 1.5 5E-05 30.9 2.6 26 7-32 42-67 (135)
273 2lhi_A Calmodulin, serine/thre 77.6 1.5 5.1E-05 32.4 2.8 24 8-31 14-37 (176)
274 1uhk_A Aequorin 2, aequorin; E 77.4 1.1 3.8E-05 31.7 2.0 22 7-28 18-39 (191)
275 2be4_A Hypothetical protein LO 77.3 1.7 5.8E-05 32.5 3.1 25 7-31 198-222 (272)
276 3k21_A PFCDPK3, calcium-depend 77.2 2 6.8E-05 31.6 3.4 25 7-31 54-78 (191)
277 2kgr_A Intersectin-1; structur 77.1 1.2 4E-05 31.2 2.0 25 7-31 50-74 (111)
278 2kax_A Protein S100-A5; EF-han 76.9 1.2 4.1E-05 29.7 1.9 25 6-30 51-75 (92)
279 1w7j_B Myosin light chain 1; m 76.8 1.9 6.4E-05 29.4 3.0 25 7-31 89-113 (151)
280 1fi6_A EH domain protein REPS1 76.7 1.4 4.9E-05 29.3 2.3 25 7-31 11-35 (92)
281 3ll8_B Calcineurin subunit B t 76.7 1.5 5.1E-05 29.8 2.4 26 6-31 76-101 (155)
282 1dtl_A Cardiac troponin C; hel 76.6 1.1 3.9E-05 30.8 1.8 25 7-31 97-121 (161)
283 2lus_A Thioredoxion; CR-Trp16, 78.2 0.52 1.8E-05 32.1 0.0 42 43-84 28-72 (143)
284 1dtl_A Cardiac troponin C; hel 76.5 1.2 4.1E-05 30.6 1.9 25 7-31 20-45 (161)
285 2znd_A Programmed cell death p 76.4 1.3 4.5E-05 31.3 2.1 25 7-31 112-136 (172)
286 3kh7_A Thiol:disulfide interch 76.2 6.8 0.00023 28.4 6.1 35 44-81 61-95 (176)
287 1qjt_A EH1, epidermal growth f 76.2 0.93 3.2E-05 31.2 1.3 27 7-33 47-73 (99)
288 1pva_A Parvalbumin; calcium bi 76.2 1.5 5.1E-05 28.9 2.2 25 7-31 44-68 (110)
289 2be4_A Hypothetical protein LO 76.0 1.8 6.1E-05 32.4 2.9 25 7-31 13-37 (272)
290 1y1x_A Leishmania major homolo 75.9 1.5 5.1E-05 32.0 2.4 25 7-31 131-155 (191)
291 3fwb_A Cell division control p 75.9 1.9 6.6E-05 29.5 2.8 25 7-31 98-122 (161)
292 1s6j_A CDPK, calcium-dependent 75.9 1.3 4.5E-05 28.0 1.8 25 7-31 25-49 (87)
293 3drn_A Peroxiredoxin, bacterio 75.8 14 0.00048 26.0 7.5 40 44-83 32-73 (161)
294 1hyu_A AHPF, alkyl hydroperoxi 75.8 3.3 0.00011 35.9 4.9 62 44-108 120-181 (521)
295 2bl0_B Myosin regulatory light 75.8 1.3 4.4E-05 29.8 1.9 26 6-31 77-102 (145)
296 1bu3_A Calcium-binding protein 75.8 1.3 4.5E-05 29.2 1.9 25 7-31 44-68 (109)
297 2ct9_A Calcium-binding protein 75.8 2.7 9.3E-05 30.9 3.8 27 5-31 113-139 (208)
298 5pal_A Parvalbumin; calcium-bi 75.6 1.3 4.6E-05 29.1 1.9 25 7-31 43-67 (109)
299 1qv0_A Obelin, OBL; photoprote 75.6 1.4 4.9E-05 31.3 2.2 22 7-28 22-43 (195)
300 1rro_A RAT oncomodulin; calciu 75.6 1.2 4.1E-05 29.3 1.6 25 7-31 43-67 (108)
301 2cq9_A GLRX2 protein, glutared 75.5 2.1 7.2E-05 30.5 3.0 78 44-137 29-113 (130)
302 1fi6_A EH domain protein REPS1 75.5 1.1 3.7E-05 29.9 1.4 25 7-31 45-69 (92)
303 2ggt_A SCO1 protein homolog, m 75.5 15 0.00052 25.2 7.5 41 43-83 25-71 (164)
304 1w7j_B Myosin light chain 1; m 75.5 0.84 2.9E-05 31.2 0.9 25 7-31 12-36 (151)
305 3pm8_A PFCDPK2, calcium-depend 75.4 1.4 4.7E-05 32.7 2.1 25 7-31 59-83 (197)
306 3ox6_A Calcium-binding protein 75.3 1.7 5.8E-05 29.2 2.4 26 6-31 89-114 (153)
307 3lor_A Thiol-disulfide isomera 75.2 13 0.00046 25.4 7.1 39 43-81 32-72 (160)
308 2zfd_A Calcineurin B-like prot 75.2 3.9 0.00013 30.7 4.6 25 7-31 124-148 (226)
309 2ccm_A Calexcitin; EF hand, ca 75.1 1.5 5E-05 31.4 2.1 25 7-31 14-39 (191)
310 2obh_A Centrin-2; DNA repair c 75.1 1.5 5E-05 30.4 2.1 25 7-31 8-32 (143)
311 2c0g_A ERP29 homolog, windbeut 74.8 3.6 0.00012 33.4 4.6 81 43-136 35-129 (248)
312 3a8r_A Putative uncharacterize 74.8 1.6 5.6E-05 32.2 2.4 25 7-31 100-124 (179)
313 1s6c_A KV4 potassium channel-i 74.6 2.3 8E-05 30.1 3.1 25 7-31 94-118 (183)
314 2ct9_A Calcium-binding protein 74.6 1.4 4.7E-05 32.5 1.9 24 8-31 157-180 (208)
315 2k8s_A Thioredoxin; dimer, str 74.5 1.3 4.5E-05 28.3 1.6 58 45-106 4-64 (80)
316 4eto_A Protein S100-A4; calciu 74.5 1.6 5.6E-05 29.7 2.2 24 7-30 55-78 (93)
317 3qrx_A Centrin; calcium-bindin 74.4 1.8 6.2E-05 30.0 2.4 25 7-31 103-127 (169)
318 1wy9_A Allograft inflammatory 74.4 2.3 7.9E-05 30.4 3.0 25 7-31 50-74 (147)
319 2ggz_A Guanylyl cyclase-activa 74.3 1.6 5.5E-05 32.4 2.2 27 5-31 135-161 (211)
320 2f33_A Calbindin; EF-hand, Ca2 73.9 1.5 5E-05 32.7 1.9 26 7-32 18-43 (263)
321 4ds7_A Calmodulin, CAM; protei 73.9 1.7 5.9E-05 29.1 2.1 25 7-31 86-110 (147)
322 1ggw_A Protein (CDC4P); light 73.9 2.3 7.8E-05 28.7 2.7 26 6-31 77-102 (140)
323 2qac_A Myosin A tail domain in 73.8 0.75 2.6E-05 31.5 0.3 25 7-31 16-41 (146)
324 1qv0_A Obelin, OBL; photoprote 73.8 2.2 7.4E-05 30.4 2.7 26 6-31 67-92 (195)
325 1kte_A Thioltransferase; redox 73.7 1.6 5.3E-05 29.0 1.8 59 45-108 14-79 (105)
326 2ovk_C Myosin catalytic light 73.7 1 3.5E-05 31.2 0.9 25 7-31 11-37 (159)
327 3nxa_A Protein S100-A16; S100 73.4 2.1 7E-05 29.8 2.5 24 7-30 57-80 (100)
328 1c07_A Protein (epidermal grow 73.1 0.99 3.4E-05 30.4 0.7 26 6-31 45-70 (95)
329 1xk4_C Calgranulin B; S100 fam 73.0 1.9 6.4E-05 30.1 2.2 26 5-30 56-81 (113)
330 3mse_B Calcium-dependent prote 73.0 2.9 0.0001 30.1 3.3 24 8-31 76-99 (180)
331 2r2i_A Guanylyl cyclase-activa 72.9 1.8 6E-05 31.4 2.1 25 7-31 54-78 (198)
332 3j04_B Myosin regulatory light 72.8 1.7 5.8E-05 29.3 1.9 25 7-31 78-102 (143)
333 4drw_A Protein S100-A10/annexi 72.7 1.8 6.2E-05 31.7 2.1 23 7-29 57-79 (121)
334 1uhk_A Aequorin 2, aequorin; E 72.7 2 6.7E-05 30.4 2.3 27 6-32 63-89 (191)
335 2bec_A Calcineurin B homologou 72.7 1.5 5.1E-05 31.9 1.7 23 8-30 32-54 (202)
336 3eur_A Uncharacterized protein 72.6 9.7 0.00033 26.0 5.8 41 44-84 34-78 (142)
337 1cb1_A Calbindin D9K; calcium- 72.5 1.5 5.1E-05 26.9 1.4 26 6-31 8-35 (78)
338 2ovk_B RLC, myosin regulatory 72.4 2.5 8.7E-05 29.0 2.7 25 7-31 87-111 (153)
339 2l4h_A Calcium and integrin-bi 72.3 5.1 0.00017 30.2 4.6 25 7-31 131-155 (214)
340 2rli_A SCO2 protein homolog, m 72.3 12 0.00042 26.0 6.4 40 43-82 28-73 (171)
341 2jjz_A Ionized calcium-binding 72.3 1.7 5.7E-05 31.2 1.8 25 7-31 88-112 (150)
342 3n22_A Protein S100-A2; EF-han 72.3 2 6.8E-05 29.8 2.2 24 7-30 56-79 (98)
343 1psr_A Psoriasin, S100A7; EF-h 72.1 2 6.7E-05 29.4 2.1 24 7-30 54-77 (100)
344 4fo5_A Thioredoxin-like protei 72.0 8.9 0.0003 26.2 5.5 41 43-83 34-75 (143)
345 1fpw_A Yeast frequenin, calciu 71.9 2.4 8.1E-05 30.1 2.5 25 7-31 65-89 (190)
346 2jnf_A Troponin C; stretch act 71.9 2 6.7E-05 29.5 2.1 27 5-31 91-117 (158)
347 1juo_A Sorcin; calcium-binding 71.8 1.1 3.9E-05 32.7 0.8 25 7-32 35-59 (198)
348 1jba_A GCAP-2, protein (guanyl 71.7 1.9 6.5E-05 31.4 2.0 25 7-31 61-85 (204)
349 1qx2_A Vitamin D-dependent cal 71.7 2.3 8E-05 25.9 2.2 26 6-31 6-33 (76)
350 1s1e_A KV channel interacting 71.6 3.9 0.00013 31.0 3.8 25 7-31 127-151 (224)
351 2hyx_A Protein DIPZ; thioredox 71.5 12 0.00041 31.7 7.2 95 44-147 85-207 (352)
352 2hze_A Glutaredoxin-1; thiored 71.5 1.1 3.9E-05 30.9 0.8 59 45-108 21-86 (114)
353 2mys_C Myosin; muscle protein, 71.5 2.3 7.7E-05 28.6 2.3 25 7-31 87-111 (149)
354 2hpk_A Photoprotein berovin; s 71.3 2.3 7.7E-05 31.1 2.4 25 7-31 130-154 (208)
355 2aao_A CDPK, calcium-dependent 71.2 2.5 8.4E-05 29.3 2.4 26 7-32 65-90 (166)
356 1m45_A MLC1P, myosin light cha 71.0 2.4 8.1E-05 28.8 2.3 26 6-31 84-109 (148)
357 1gjy_A Sorcin, CP-22, V19; cal 70.6 1.6 5.6E-05 30.7 1.4 25 7-32 4-28 (167)
358 1g8i_A Frequenin, neuronal cal 70.6 2 6.9E-05 30.5 1.9 25 7-31 65-89 (190)
359 2i81_A 2-Cys peroxiredoxin; st 70.5 18 0.00061 27.5 7.5 41 43-83 54-96 (213)
360 2jjz_A Ionized calcium-binding 70.4 3 0.0001 29.8 2.9 25 7-31 52-76 (150)
361 2kyc_A Parvalbumin-3, parvalbu 70.4 1.4 4.7E-05 29.0 0.9 25 7-31 43-67 (108)
362 2l2e_A Calcium-binding protein 70.2 2.5 8.6E-05 30.1 2.4 25 7-31 101-125 (190)
363 1juo_A Sorcin; calcium-binding 70.2 2.7 9.3E-05 30.6 2.6 24 8-31 106-129 (198)
364 1s6c_A KV4 potassium channel-i 69.8 2.3 8E-05 30.1 2.1 25 7-31 58-82 (183)
365 1wy9_A Allograft inflammatory 69.6 2.9 9.8E-05 29.9 2.6 26 8-33 87-112 (147)
366 2bec_A Calcineurin B homologou 69.6 3 0.0001 30.3 2.7 27 7-33 63-89 (202)
367 1wdc_C Scallop myosin; calcium 69.6 1.2 4.2E-05 30.6 0.6 25 7-31 11-37 (156)
368 2ovk_C Myosin catalytic light 69.4 2.7 9.4E-05 29.0 2.4 25 7-31 87-111 (159)
369 1g8i_A Frequenin, neuronal cal 69.3 2.2 7.7E-05 30.3 1.9 25 7-31 101-125 (190)
370 1a4p_A S100A10; S100 family, E 69.2 2.6 8.7E-05 28.6 2.1 25 7-31 51-75 (96)
371 2wcb_A Protein S100-A12; calci 69.1 2.6 9.1E-05 28.4 2.2 24 7-30 57-80 (95)
372 3kp9_A Vkorc1/thioredoxin doma 69.0 1.2 4.1E-05 37.4 0.5 71 44-135 200-276 (291)
373 1bjf_A Neurocalcin delta; calc 68.8 2.3 7.9E-05 30.3 1.9 26 7-32 65-90 (193)
374 5pal_A Parvalbumin; calcium-bi 68.5 5.6 0.00019 26.0 3.7 43 7-51 11-53 (109)
375 2mys_B Myosin; muscle protein, 68.4 2.8 9.5E-05 29.2 2.3 26 6-31 96-121 (166)
376 1fpw_A Yeast frequenin, calciu 68.4 2.4 8.2E-05 30.1 1.9 25 7-31 101-125 (190)
377 3ewl_A Uncharacterized conserv 68.4 10 0.00034 25.6 5.1 41 43-83 29-73 (142)
378 3zwh_A Protein S100-A4; Ca-bin 68.4 2.7 9.3E-05 29.5 2.2 25 6-30 57-81 (104)
379 1bjf_A Neurocalcin delta; calc 68.3 2.6 8.9E-05 30.0 2.1 25 7-31 101-125 (193)
380 1iq3_A Ralbp1-interacting prot 68.3 1.9 6.6E-05 30.3 1.4 23 8-30 59-81 (110)
381 1dgu_A Calcium-saturated CIB; 68.2 3.3 0.00011 29.5 2.6 26 6-31 99-124 (183)
382 3cs1_A Flagellar calcium-bindi 68.1 2.8 9.7E-05 31.4 2.4 25 7-31 50-74 (219)
383 2d8n_A Recoverin; structural g 68.1 2.6 8.9E-05 30.6 2.1 25 7-31 109-133 (207)
384 1j55_A S-100P protein; metal b 67.9 2.5 8.6E-05 28.5 1.9 24 7-30 54-77 (95)
385 3fs7_A Parvalbumin, thymic; ca 67.8 5.8 0.0002 26.0 3.6 28 7-36 12-39 (109)
386 2ggz_A Guanylyl cyclase-activa 67.8 2.4 8.3E-05 31.4 1.9 26 7-32 59-84 (211)
387 1gjy_A Sorcin, CP-22, V19; cal 67.6 2.8 9.7E-05 29.5 2.2 23 9-31 76-98 (167)
388 1exr_A Calmodulin; high resolu 67.4 3.3 0.00011 28.4 2.4 24 8-31 86-109 (148)
389 2qac_A Myosin A tail domain in 67.4 3.2 0.00011 28.2 2.4 26 6-31 85-110 (146)
390 2y5i_A S100Z, S100 calcium bin 67.3 2.7 9.1E-05 28.8 1.9 24 7-30 55-78 (99)
391 3sjs_A URE3-BP sequence specif 67.2 2.5 8.6E-05 32.1 1.9 25 7-31 53-77 (220)
392 3dd4_A KV channel-interacting 67.2 3.6 0.00012 31.2 2.8 26 7-32 104-129 (229)
393 1qmv_A Human thioredoxin perox 67.0 19 0.00066 26.3 6.8 41 43-83 36-78 (197)
394 2l2e_A Calcium-binding protein 66.8 2.9 9.7E-05 29.8 2.1 26 7-32 65-90 (190)
395 1k2h_A S100A1, S-100 protein, 66.8 2.6 8.9E-05 27.0 1.7 25 7-31 11-37 (93)
396 2h01_A 2-Cys peroxiredoxin; th 66.3 12 0.00042 27.2 5.5 41 43-83 33-75 (192)
397 1we0_A Alkyl hydroperoxide red 66.3 28 0.00096 25.1 7.4 41 43-83 33-75 (187)
398 1eh2_A EPS15; calcium binding, 66.0 2.7 9.3E-05 29.6 1.8 25 7-31 50-74 (106)
399 1wdc_B Scallop myosin; calcium 66.0 3.9 0.00013 28.1 2.6 26 6-31 88-113 (156)
400 1wdc_C Scallop myosin; calcium 65.7 3.5 0.00012 28.2 2.3 25 7-31 86-110 (156)
401 2obh_A Centrin-2; DNA repair c 65.6 3.7 0.00013 28.3 2.4 25 7-31 81-105 (143)
402 3nyv_A Calmodulin-domain prote 65.2 3.9 0.00013 34.1 2.9 23 8-30 385-407 (484)
403 3dtp_E RLC, myosin regulatory 64.9 5.1 0.00018 29.3 3.2 25 7-31 128-152 (196)
404 1zye_A Thioredoxin-dependent p 64.3 18 0.00062 27.5 6.4 41 43-83 58-100 (220)
405 1s6i_A CDPK, calcium-dependent 64.2 3.4 0.00012 30.3 2.1 26 6-31 83-108 (188)
406 1xk4_A Calgranulin A; S100 fam 64.1 3.2 0.00011 27.2 1.8 25 7-31 12-38 (93)
407 2lvv_A Flagellar calcium-bindi 63.8 3.3 0.00011 31.3 2.1 25 7-31 135-159 (226)
408 1k94_A Grancalcin; penta-EF-ha 63.8 4.1 0.00014 28.5 2.4 25 7-31 42-66 (165)
409 3k21_A PFCDPK3, calcium-depend 63.4 7.6 0.00026 28.4 3.9 25 7-31 89-113 (191)
410 3a4u_B Multiple coagulation fa 63.1 1.5 5.2E-05 31.4 0.0 24 8-31 30-53 (143)
411 2lnk_A Protein S100-A4; EF-han 62.5 3.9 0.00014 29.3 2.1 24 7-30 67-90 (113)
412 2jul_A Calsenilin; EF-hand, ca 62.5 13 0.00043 28.5 5.2 25 7-31 167-191 (256)
413 2kax_A Protein S100-A5; EF-han 62.1 3 0.0001 27.7 1.3 25 7-31 12-38 (92)
414 1bu3_A Calcium-binding protein 61.4 7.7 0.00026 25.3 3.3 27 7-35 12-38 (109)
415 1xk4_C Calgranulin B; S100 fam 61.3 5.5 0.00019 27.6 2.7 26 7-32 14-41 (113)
416 1h75_A Glutaredoxin-like prote 61.2 5.6 0.00019 24.9 2.5 55 45-107 3-60 (81)
417 2h2k_A Protein S100-A13; calci 61.1 4 0.00014 28.7 1.9 24 7-30 64-87 (106)
418 1k8u_A S100A6, calcyclin, CACY 60.7 3.3 0.00011 26.1 1.3 25 7-31 12-38 (90)
419 2p5q_A Glutathione peroxidase 60.1 11 0.00037 26.2 4.1 40 43-82 34-74 (170)
420 1qls_A S100C protein, calgizza 60.1 4.2 0.00014 26.4 1.8 26 7-32 15-42 (99)
421 1iq3_A Ralbp1-interacting prot 60.0 3.9 0.00013 28.7 1.7 25 7-31 24-48 (110)
422 3dd4_A KV channel-interacting 60.0 4.8 0.00016 30.5 2.3 25 7-31 140-164 (229)
423 3sjs_A URE3-BP sequence specif 59.9 5 0.00017 30.4 2.4 26 7-32 89-114 (220)
424 1eh2_A EPS15; calcium binding, 59.6 8.8 0.0003 26.9 3.5 23 8-31 18-40 (106)
425 3q5i_A Protein kinase; CDPK, m 59.5 8.8 0.0003 32.4 4.1 24 8-31 438-461 (504)
426 1alv_A Calpain, S-camld; calci 59.5 3.8 0.00013 28.9 1.6 21 8-28 50-70 (173)
427 3pm8_A PFCDPK2, calcium-depend 59.1 4.9 0.00017 29.6 2.2 28 6-33 130-157 (197)
428 1ij5_A Plasmodial specific LAV 59.0 5.7 0.00019 32.5 2.8 27 6-32 123-149 (323)
429 2bmx_A Alkyl hydroperoxidase C 58.8 30 0.001 25.2 6.5 41 43-83 47-89 (195)
430 2klx_A Glutaredoxin; thioredox 56.8 6.2 0.00021 25.4 2.2 56 45-108 8-66 (89)
431 2ht9_A Glutaredoxin-2; thiored 56.8 7.1 0.00024 28.8 2.7 78 45-137 51-135 (146)
432 1pva_A Parvalbumin; calcium bi 55.7 13 0.00045 24.1 3.7 28 7-36 12-39 (110)
433 1xvq_A Thiol peroxidase; thior 55.3 34 0.0012 24.5 6.2 38 43-82 46-84 (175)
434 3lij_A Calcium/calmodulin depe 55.2 9.5 0.00032 32.2 3.6 23 8-30 393-415 (494)
435 3nso_A Protein S100-A3; EF-han 55.1 3.2 0.00011 29.2 0.5 23 7-29 55-77 (101)
436 1alv_A Calpain, S-camld; calci 54.4 7.2 0.00025 27.5 2.3 25 7-31 79-103 (173)
437 2kld_A Polycystin-2; PC2, PKD2 54.3 5 0.00017 28.3 1.5 24 7-30 82-105 (123)
438 3dwv_A Glutathione peroxidase- 53.8 39 0.0013 24.5 6.4 39 43-81 48-87 (187)
439 1rro_A RAT oncomodulin; calciu 53.3 13 0.00044 24.2 3.3 26 7-34 11-36 (108)
440 3q5i_A Protein kinase; CDPK, m 52.6 6.4 0.00022 33.3 2.1 25 7-31 357-381 (504)
441 2jq6_A EH domain-containing pr 52.2 5.5 0.00019 29.9 1.5 25 7-31 86-110 (139)
442 3fia_A Intersectin-1; EH 1 dom 52.0 5.9 0.0002 29.4 1.6 29 8-36 69-97 (121)
443 2jsy_A Probable thiol peroxida 51.8 23 0.00079 24.8 4.7 40 43-83 46-86 (167)
444 3lij_A Calcium/calmodulin depe 51.8 6.3 0.00022 33.2 1.9 25 7-31 348-372 (494)
445 2pvb_A Protein (parvalbumin); 51.7 14 0.00048 24.0 3.3 26 7-34 11-36 (108)
446 2jul_A Calsenilin; EF-hand, ca 51.4 7.1 0.00024 30.0 2.0 25 7-31 131-155 (256)
447 2lhi_A Calmodulin, serine/thre 51.3 4.5 0.00015 29.8 0.8 22 8-30 123-144 (176)
448 1rwy_A Parvalbumin alpha; EF-h 51.3 15 0.00052 23.8 3.4 27 7-35 11-37 (109)
449 1xvw_A Hypothetical protein RV 51.1 36 0.0012 23.5 5.5 41 43-83 38-80 (160)
450 2v1m_A Glutathione peroxidase; 50.4 20 0.00068 24.8 4.1 40 43-82 33-73 (169)
451 2zci_A Phosphoenolpyruvate car 50.1 9.1 0.00031 36.0 2.8 37 110-152 95-131 (610)
452 3mwu_A Calmodulin-domain prote 48.5 7.6 0.00026 32.6 1.9 23 7-29 333-355 (486)
453 3a2v_A Probable peroxiredoxin; 48.4 49 0.0017 26.5 6.6 41 44-84 37-78 (249)
454 3c1r_A Glutaredoxin-1; oxidize 48.3 6.3 0.00022 27.6 1.2 59 45-108 27-93 (118)
455 3mwu_A Calmodulin-domain prote 48.0 8.1 0.00028 32.4 2.0 26 6-31 382-407 (486)
456 2ls5_A Uncharacterized protein 53.5 3.9 0.00013 28.5 0.0 42 43-84 35-79 (159)
457 2p31_A CL683, glutathione pero 47.1 23 0.00077 25.6 4.1 40 43-82 51-91 (181)
458 3a8r_A Putative uncharacterize 46.9 7.9 0.00027 28.5 1.6 27 8-36 31-57 (179)
459 2kyc_A Parvalbumin-3, parvalbu 46.4 14 0.0005 23.9 2.7 26 7-34 11-36 (108)
460 1r7h_A NRDH-redoxin; thioredox 46.3 17 0.00058 21.9 2.9 37 46-88 4-40 (75)
461 3i5g_C Myosin catalytic light 45.8 5.4 0.00019 28.9 0.5 56 8-68 12-74 (159)
462 2lmt_A Calmodulin-related prot 45.7 8.5 0.00029 26.7 1.5 24 7-30 85-108 (148)
463 2i7a_A Calpain 13; calcium-dep 45.2 10 0.00036 28.0 2.0 24 7-31 117-140 (174)
464 2vup_A Glutathione peroxidase- 44.8 22 0.00076 25.8 3.8 40 43-82 50-90 (190)
465 1dgu_A Calcium-saturated CIB; 44.8 12 0.00041 26.4 2.3 24 8-31 63-87 (183)
466 2yan_A Glutaredoxin-3; oxidore 43.8 14 0.00048 24.8 2.4 56 45-108 19-83 (105)
467 3u0k_A Rcamp; fluorescent prot 43.6 10 0.00036 34.1 2.1 25 7-31 304-328 (440)
468 1ij5_A Plasmodial specific LAV 42.9 9.2 0.00031 31.3 1.5 24 8-31 191-214 (323)
469 3rm1_A Protein S100-B; alpha-h 42.0 25 0.00087 23.0 3.4 24 7-31 11-37 (92)
470 2obi_A PHGPX, GPX-4, phospholi 41.6 31 0.0011 24.7 4.1 40 43-82 49-89 (183)
471 3mjd_A Orotate phosphoribosylt 41.2 9.2 0.00031 31.0 1.3 23 109-136 10-32 (232)
472 3nyv_A Calmodulin-domain prote 41.1 12 0.00041 31.2 2.0 25 8-32 421-445 (484)
473 2k6v_A Putative cytochrome C o 40.8 17 0.00057 25.2 2.4 41 43-83 37-82 (172)
474 3sg6_A Gcamp2, myosin light ch 39.0 14 0.00047 32.8 2.1 26 7-32 314-339 (450)
475 2khp_A Glutaredoxin; thioredox 38.6 19 0.00065 23.0 2.3 55 45-108 8-67 (92)
476 2jq6_A EH domain-containing pr 37.4 17 0.00058 27.2 2.1 24 7-31 53-76 (139)
477 1fov_A Glutaredoxin 3, GRX3; a 36.2 29 0.00098 21.3 2.8 56 45-108 3-62 (82)
478 2lnk_A Protein S100-A4; EF-han 36.0 43 0.0015 23.7 4.1 25 7-31 24-50 (113)
479 3i5g_B Myosin regulatory light 35.0 26 0.00089 25.0 2.7 25 7-31 87-111 (153)
480 2i7a_A Calpain 13; calcium-dep 34.8 14 0.00049 27.2 1.4 18 9-26 50-67 (174)
481 3h8q_A Thioredoxin reductase 3 34.0 27 0.00093 23.9 2.6 58 45-108 19-81 (114)
482 2faf_A Phosphoenolpyruvate car 33.9 20 0.00067 33.8 2.4 27 126-152 105-131 (608)
483 3cmi_A Peroxiredoxin HYR1; thi 33.9 38 0.0013 23.9 3.5 38 43-81 34-72 (171)
484 3gkn_A Bacterioferritin comigr 33.6 33 0.0011 23.8 3.0 41 43-83 37-79 (163)
485 3kij_A Probable glutathione pe 33.3 49 0.0017 23.7 4.0 38 43-80 40-78 (180)
486 3rhb_A ATGRXC5, glutaredoxin-C 33.1 18 0.00061 24.4 1.5 78 45-137 21-106 (113)
487 2gs3_A PHGPX, GPX-4, phospholi 32.3 53 0.0018 23.7 4.1 40 43-82 51-91 (185)
488 2l4h_A Calcium and integrin-bi 31.5 23 0.00077 26.6 2.0 25 8-32 94-119 (214)
489 3u5i_q A0, L10E, 60S acidic ri 31.1 31 0.0011 29.2 3.0 74 61-136 10-102 (312)
490 1xzo_A BSSCO, hypothetical pro 31.0 33 0.0011 23.8 2.7 39 44-82 36-78 (174)
491 4drw_A Protein S100-A10/annexi 30.6 24 0.00081 25.6 1.9 28 3-31 10-40 (121)
492 3moe_A Phosphoenolpyruvate car 28.6 18 0.00061 34.1 1.1 27 126-152 120-146 (624)
493 1eg3_A Dystrophin; EF-hand lik 28.3 20 0.00067 29.7 1.2 27 6-32 133-159 (261)
494 1sjj_A Actinin; 3-helix bundle 27.7 19 0.00065 32.8 1.1 25 7-31 763-787 (863)
495 3qmx_A Glutaredoxin A, glutare 27.4 41 0.0014 22.7 2.6 56 45-108 18-78 (99)
496 2f8a_A Glutathione peroxidase 26.2 71 0.0024 24.1 4.0 40 43-82 49-89 (208)
497 3hd5_A Thiol:disulfide interch 25.5 66 0.0023 23.3 3.6 39 44-82 28-66 (195)
498 3i5g_C Myosin catalytic light 25.2 36 0.0012 24.4 2.1 23 8-30 88-110 (159)
499 1gxg_A Colicin E8 immunity pro 25.1 36 0.0012 24.1 1.9 17 125-141 10-26 (85)
500 3msz_A Glutaredoxin 1; alpha-b 25.0 30 0.001 21.5 1.4 73 45-139 6-87 (89)
No 1
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=100.00 E-value=8.3e-42 Score=271.64 Aligned_cols=118 Identities=76% Similarity=1.355 Sum_probs=110.3
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
.+|++|+.+|.++|++|+.+|.++|++.++.+.+|.||+|++|++.++|++..++|+|||++++||+||+|||||||++|
T Consensus 43 ~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fFk~G~~v~vd~Gtgd~~k~vG 122 (160)
T 2av4_A 43 LVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFFYRNKHMMIDLGTGNNNKINW 122 (160)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEEETTEEEEEECSSSCCSCBCS
T ss_pred EEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEEEEecCCCCcCeEEe
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCChhHHHHHHHHHhhccccCCeeEECCCCcccccCC
Q psy4160 123 ALEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTKYRY 160 (160)
Q Consensus 123 ~~~~kqe~iDiie~iyrga~kGk~iv~sP~dy~~~~~~ 160 (160)
++.+||+|+++||++||||+||||||+||+||||+|||
T Consensus 123 a~~~k~~l~~~ie~~~r~a~~g~~~v~~p~~~~~~~~~ 160 (160)
T 2av4_A 123 PMNNKQEFIDIVETIFRGARKGRGLVISPKDYSTKYKY 160 (160)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTCSEEECSSCC------
T ss_pred ecCCHHHHHHHHHHHHHHhhcCCeEEECCCccchhccC
Confidence 99999999999999999999999999999999999997
No 2
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.91 E-value=2.9e-24 Score=159.06 Aligned_cols=118 Identities=94% Similarity=1.525 Sum_probs=101.3
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
.++|-|+.+|-++|.++..+|.+++++.+.-..++.||+++-|++.+.|.+...+|++||-+++.+..++|+|++++++|
T Consensus 25 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~~~~g 104 (142)
T 1qgv_A 25 VVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINW 104 (142)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEEEEEECC------CCS
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcEEEEecCCCCcceeee
Confidence 35899999999999999999999999887668889999999999999999988889888888999999999999999999
Q ss_pred ecCChhHHHHHHHHHhhccccCCeeEECCCCcccccCC
Q psy4160 123 ALEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTKYRY 160 (160)
Q Consensus 123 ~~~~kqe~iDiie~iyrga~kGk~iv~sP~dy~~~~~~ 160 (160)
+++++++|+++|+.+++||++|||||+||++||++|||
T Consensus 105 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (142)
T 1qgv_A 105 AMEDKQEMVDIIETVYRGARKGRGLVVSPKDYSTKYRY 142 (142)
T ss_dssp CCSCHHHHHHHHHHHHHHHTTTCSEEECCCCCC-----
T ss_pred ecCcHHHHHHHHHHHHHHHhcCCeEEeCCCCccccccC
Confidence 99999999999999999999999999999999999998
No 3
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.89 E-value=2.8e-23 Score=154.81 Aligned_cols=118 Identities=32% Similarity=0.668 Sum_probs=110.1
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
.+||.|+-+|-++|.+|..+|.+++++.++...++.||+++.|++.+.|.+.-.+|++||-+++.+++|+|+|++.++.+
T Consensus 25 ~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~g~~~~~~~~G 104 (149)
T 3gix_A 25 VLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVG 104 (149)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEEEEECSSSCCSCEES
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCeEEEeecCCCCCCeEee
Confidence 45899999999999999999999999988878999999999999999999966566668888999999999999999999
Q ss_pred ecCChhHHHHHHHHHhhccccCCeeEECCCCcccccCC
Q psy4160 123 ALEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTKYRY 160 (160)
Q Consensus 123 ~~~~kqe~iDiie~iyrga~kGk~iv~sP~dy~~~~~~ 160 (160)
++.++++|+++|+.++|||++|||||.||++|+++++|
T Consensus 105 ~~~~~~~l~~~l~~~~~~~~~g~~~~~s~~~~~~~~~~ 142 (149)
T 3gix_A 105 SFKTKQDFIDLIEVIYRGAMRGKLIVQSPIDPKNIPKY 142 (149)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCSEEECCSCGGGSCCC
T ss_pred ecCCHHHHHHHHHHHHHHhhcCCceEECCccccccccc
Confidence 89999999999999999999999999999999998875
No 4
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.07 E-value=1.3e-05 Score=53.19 Aligned_cols=81 Identities=21% Similarity=0.344 Sum_probs=64.2
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWA 123 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~~ 123 (160)
.+|-|+.+|-|.|.++...|.+++++.++ ..++.||.++-|+..+.|.+..-+|+++|-+++.+.- +.+.
T Consensus 23 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~---------~~g~ 92 (105)
T 3m9j_A 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQKVGE---------FSGA 92 (105)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEEEE---------EESS
T ss_pred EEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeEEEE---------EeCC
Confidence 48999999999999999999999998877 7788999999999999999988778767744444322 2333
Q ss_pred cCChhHHHHHHHH
Q psy4160 124 LEDKQEMIDIVET 136 (160)
Q Consensus 124 ~~~kqe~iDiie~ 136 (160)
+.+++...|+.
T Consensus 93 --~~~~l~~~l~~ 103 (105)
T 3m9j_A 93 --NKEKLEATINE 103 (105)
T ss_dssp --CHHHHHHHHHH
T ss_pred --CHHHHHHHHHH
Confidence 45677766654
No 5
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.99 E-value=4.7e-05 Score=50.33 Aligned_cols=85 Identities=18% Similarity=0.259 Sum_probs=66.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|+.+|-|.|.++...|.+++++.+.-..++.+|+++-|++.+.|.+..-+|++|| ++..+.- ++.+
T Consensus 23 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~-~~g~~~~--------~~~g 93 (109)
T 3tco_A 23 LVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLIF-VNGQLVD--------SLVG 93 (109)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTEEEE--------EEES
T ss_pred eEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEEE-cCCcEEE--------eeec
Confidence 348999999999999999999999999887788899999999999999999777777666 5443321 1222
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
. .+.++|...|+.+
T Consensus 94 ~-~~~~~l~~~l~~~ 107 (109)
T 3tco_A 94 A-VDEDTLESTVNKY 107 (109)
T ss_dssp C-CCHHHHHHHHHHH
T ss_pred c-CCHHHHHHHHHHH
Confidence 2 3457788877764
No 6
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.95 E-value=2.6e-05 Score=54.89 Aligned_cols=81 Identities=20% Similarity=0.367 Sum_probs=63.2
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWA 123 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~~ 123 (160)
+||-|+-+|-++|.+|..+|.++|++.++. .++-||+++-|+..+-|.+.--+|++||-+++-+ + ++.++
T Consensus 23 vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~~v--~-------~~~G~ 92 (105)
T 3zzx_A 23 VVIDFYATWCGPCKMIAPKLEELSQSMSDV-VFLKVDVDECEDIAQDNQIACMPTFLFMKNGQKL--D-------SLSGA 92 (105)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTE-EEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEE--E-------EEESC
T ss_pred EEEEEECCCCCCccCCCcchhhhhhccCCe-EEEEEecccCHHHHHHcCCCeecEEEEEECCEEE--E-------EEeCc
Confidence 589999999999999999999999987764 5788999999999999999776787666444432 2 23332
Q ss_pred cCChhHHHHHHHH
Q psy4160 124 LEDKQEMIDIVET 136 (160)
Q Consensus 124 ~~~kqe~iDiie~ 136 (160)
+++++.+.|+.
T Consensus 93 --~~~~l~~~i~k 103 (105)
T 3zzx_A 93 --NYDKLLELVEK 103 (105)
T ss_dssp --CHHHHHHHHHH
T ss_pred --CHHHHHHHHHh
Confidence 45777777763
No 7
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.93 E-value=2.4e-05 Score=52.85 Aligned_cols=85 Identities=9% Similarity=0.099 Sum_probs=56.3
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
.++|-|+.+|-++|.+|...|.+++++..+ ..++.||+++-|+..+.|.+..-+|+++|-+++-+ + ++.+
T Consensus 20 ~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~--~-------~~~g 89 (105)
T 4euy_A 20 LVLLFIKTENCGVCDVMLRKVNYVLENYNY-VEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEI--L-------RESR 89 (105)
T ss_dssp EEEEEEEESSCHHHHHHHHHHHHHHHTCTT-EEEEEEEECCC---------CCCCEEEEEETTEEE--E-------EEES
T ss_pred CEEEEEeCCCCcchHHHHHHHHHHHHHcCC-ceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEE--E-------EEeC
Confidence 458999999999999999999999998755 67789999999999999999777777666433322 2 1222
Q ss_pred ecCChhHHHHHHHHHh
Q psy4160 123 ALEDKQEMIDIVETVY 138 (160)
Q Consensus 123 ~~~~kqe~iDiie~iy 138 (160)
. .++++|.+.++..+
T Consensus 90 ~-~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 90 F-ISLENLERTIQLFE 104 (105)
T ss_dssp S-CCHHHHHHHHHTTC
T ss_pred C-cCHHHHHHHHHHhh
Confidence 2 26788888877543
No 8
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.91 E-value=5.5e-05 Score=50.50 Aligned_cols=85 Identities=15% Similarity=0.189 Sum_probs=65.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|+.+|-+.|.+|...|.+++++.+.-..++.||+++-|++.+.|.+.--+|+++|-+++-+.--.|
T Consensus 24 ~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g--------- 94 (111)
T 3gnj_A 24 ACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILYFKDGEYKGKMAG--------- 94 (111)
T ss_dssp CEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEEEEEEES---------
T ss_pred EEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEEEECCEEEEEEec---------
Confidence 45899999999999999999999999887667889999999999999999976667666644443321112
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
..+.++|...|+.+
T Consensus 95 -~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 95 -DVEDDEVEQMIADV 108 (111)
T ss_dssp -SCCHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHH
Confidence 23567777777654
No 9
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.86 E-value=2.8e-05 Score=53.99 Aligned_cols=82 Identities=20% Similarity=0.304 Sum_probs=64.1
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
.++|-|..+|-+.|.+|...|.+++++.++ ..++.||+++-|+..+.|.+.--+|++||-+++.+. ++.+
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~---------~~~G 102 (116)
T 3qfa_C 33 LVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPTFQFFKKGQKVG---------EFSG 102 (116)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSSSEEEEESSSSEEE---------EEES
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccccEEEEEeCCeEEE---------EEcC
Confidence 358999999999999999999999998888 788899999999999999997777766663333322 2333
Q ss_pred ecCChhHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVET 136 (160)
Q Consensus 123 ~~~~kqe~iDiie~ 136 (160)
. +.++|...|+.
T Consensus 103 ~--~~~~l~~~l~~ 114 (116)
T 3qfa_C 103 A--NKEKLEATINE 114 (116)
T ss_dssp C--CHHHHHHHHHH
T ss_pred C--CHHHHHHHHHH
Confidence 3 56777777764
No 10
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.81 E-value=6.7e-05 Score=51.38 Aligned_cols=82 Identities=18% Similarity=0.298 Sum_probs=62.4
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
.++|-|+.+|-+.|.+|...|.+++++.++ ..++.||+++-+++.+-|.+.--+|++||-+++-+. ++.+
T Consensus 26 ~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~---------~~~G 95 (109)
T 3f3q_A 26 LVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEVA---------KVVG 95 (109)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE---------EEES
T ss_pred EEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCccCEEEEEECCEEEE---------EEeC
Confidence 348999999999999999999999998877 677899999999999999997766776664444332 2223
Q ss_pred ecCChhHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVET 136 (160)
Q Consensus 123 ~~~~kqe~iDiie~ 136 (160)
. +.+++...|+.
T Consensus 96 ~--~~~~l~~~i~~ 107 (109)
T 3f3q_A 96 A--NPAAIKQAIAA 107 (109)
T ss_dssp S--CHHHHHHHHHH
T ss_pred C--CHHHHHHHHHh
Confidence 3 34666666653
No 11
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.80 E-value=0.00018 Score=46.80 Aligned_cols=84 Identities=18% Similarity=0.310 Sum_probs=63.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|..+|-|.|.++...|.+++++.++ ..++.+|+++-+++.+-|.+..-+|+++| ++..+.- ++.+
T Consensus 18 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~g~~~~--------~~~g 87 (104)
T 2e0q_A 18 IAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVIFF-KDGEPVD--------EIIG 87 (104)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEEEEE-ETTEEEE--------EEES
T ss_pred cEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEEEEE-ECCeEhh--------hccC
Confidence 458999999999999999999999998888 88899999999999999999776676666 4433221 1112
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
. .+.+++.+.++.+
T Consensus 88 ~-~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 88 A-VPREEIEIRIKNL 101 (104)
T ss_dssp C-CCHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHH
Confidence 1 2457777777653
No 12
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.71 E-value=0.00015 Score=48.60 Aligned_cols=84 Identities=12% Similarity=0.193 Sum_probs=64.0
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|..+|-|.|.++...|.+++++.+.-..++.||+++-+++.+-|.+..-+|+++| ++..+.- ++.+
T Consensus 26 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~~--------~~~G 96 (112)
T 1ep7_A 26 PIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVY-KDGVKAD--------DLVG 96 (112)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEEEEE-ETTEEEE--------EEES
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEEEEE-ECCeEEE--------EEcC
Confidence 358999999999999999999999998774577889999999999999999766676555 5433221 2233
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
. +.+++.+.|+.+
T Consensus 97 ~--~~~~l~~~l~~~ 109 (112)
T 1ep7_A 97 A--SQDKLKALVAKH 109 (112)
T ss_dssp C--CHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHH
Confidence 3 567788877765
No 13
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.70 E-value=0.00011 Score=50.29 Aligned_cols=83 Identities=24% Similarity=0.377 Sum_probs=64.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|+.+|-|.|.++...|.+++++.++ ..++.||+++-+++.+-|.+..-+|+++| ++..+. .++.+
T Consensus 36 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~--------~~~~G 105 (122)
T 2vlu_A 36 LVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAMPTFLFM-KEGDVK--------DRVVG 105 (122)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTEEE--------EEEES
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCcccEEEEE-eCCEEE--------EEEeC
Confidence 358999999999999999999999998877 77889999999999999999766676555 443221 13344
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
.. +++|.+.|+..
T Consensus 106 ~~--~~~l~~~l~~~ 118 (122)
T 2vlu_A 106 AI--KEELTAKVGLH 118 (122)
T ss_dssp SC--HHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHH
Confidence 44 67888877754
No 14
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.69 E-value=0.00029 Score=46.88 Aligned_cols=85 Identities=16% Similarity=0.283 Sum_probs=64.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|+.+|-|.|.++...|.+++++.+.-..++.+|+++-|++.+-|.+.--+|+++| ++..+.- ++.+
T Consensus 22 ~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~~--------~~~G 92 (108)
T 2trx_A 22 AILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF-KNGEVAA--------TKVG 92 (108)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEE-ETTEEEE--------EEES
T ss_pred eEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEE-eCCEEEE--------EEec
Confidence 358999999999999999999999998876688899999999999999999776676566 5433221 1222
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
. .+.++|.+.|+.+
T Consensus 93 ~-~~~~~l~~~l~~~ 106 (108)
T 2trx_A 93 A-LSKGQLKEFLDAN 106 (108)
T ss_dssp C-CCHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHh
Confidence 2 2567787777653
No 15
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.67 E-value=0.00027 Score=46.63 Aligned_cols=84 Identities=19% Similarity=0.201 Sum_probs=63.1
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|+.+|-|.|.++...|.+++++.++-..++.+|+++-|.+.+-|.+..-+|+++|-+++-+.- +.+
T Consensus 22 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~---------~~G 92 (107)
T 2i4a_A 22 LVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLVRDGKVIDK---------KVG 92 (107)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEEEE---------EES
T ss_pred EEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEEeCCEEEEE---------ecC
Confidence 34899999999999999999999999887667889999999999999999976667666633333221 112
Q ss_pred ecCChhHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVET 136 (160)
Q Consensus 123 ~~~~kqe~iDiie~ 136 (160)
..+++++...|+.
T Consensus 93 -~~~~~~l~~~l~~ 105 (107)
T 2i4a_A 93 -ALPKSQLKAWVES 105 (107)
T ss_dssp -CCCHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHh
Confidence 2245777777654
No 16
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.67 E-value=0.00023 Score=46.88 Aligned_cols=82 Identities=16% Similarity=0.316 Sum_probs=62.2
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWA 123 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~~ 123 (160)
.++-|..+|-|.|.++...|.+++++.+.-..++.||+++-+++.+-|.+..-+|+++|-+++-+. ++.+
T Consensus 23 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~---------~~~g- 92 (106)
T 1xwb_A 23 VVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVE---------EFAG- 92 (106)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE---------EEES-
T ss_pred EEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEEcCCcEEE---------EEcC-
Confidence 488999999999999999999999988666788999999999999999997766766654444332 2222
Q ss_pred cCChhHHHHHHHH
Q psy4160 124 LEDKQEMIDIVET 136 (160)
Q Consensus 124 ~~~kqe~iDiie~ 136 (160)
.+.+++.+.|+.
T Consensus 93 -~~~~~l~~~i~~ 104 (106)
T 1xwb_A 93 -ANAKRLEDVIKA 104 (106)
T ss_dssp -CCHHHHHHHHHH
T ss_pred -CCHHHHHHHHHH
Confidence 134667776654
No 17
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.66 E-value=0.00013 Score=52.23 Aligned_cols=92 Identities=16% Similarity=0.098 Sum_probs=70.8
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|..+|-+.|.+|...|.+++++.++-..++.||+++-|++.+.|.+..-+|+++| ++..+. . ++.+
T Consensus 26 ~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~G 96 (140)
T 3hz4_A 26 PVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKFF-CHGRPV-W-------EQVG 96 (140)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEEEE-ETTEEE-E-------EEES
T ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEEEE-eCCcEE-E-------EEcC
Confidence 458999999999999999999999999888788899999999999999999665587666 443332 1 1222
Q ss_pred ecCChhHHHHHHHHHhhccccC
Q psy4160 123 ALEDKQEMIDIVETVYRGARKG 144 (160)
Q Consensus 123 ~~~~kqe~iDiie~iyrga~kG 144 (160)
..+.++|...|+.+...+.+.
T Consensus 97 -~~~~~~l~~~l~~~l~~~~~~ 117 (140)
T 3hz4_A 97 -QIYPSILKNAVRDMLQHGEEC 117 (140)
T ss_dssp -SCCHHHHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHhcccccC
Confidence 235688898888887665443
No 18
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.65 E-value=8.1e-05 Score=51.86 Aligned_cols=84 Identities=19% Similarity=0.247 Sum_probs=63.3
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKIN 121 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin 121 (160)
..+|-|..+|-|.|.++...|.+++++.++- ..++.||+++-|++.+.|.+..-+|+++|-+++-+. ++.
T Consensus 35 ~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G~~~~---------~~~ 105 (121)
T 2j23_A 35 VVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNGQKID---------TVV 105 (121)
T ss_dssp CEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEEETTEEEE---------EEE
T ss_pred EEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEEECCeEEe---------eEc
Confidence 3589999999999999999999999887664 678899999999999999997666766653333322 223
Q ss_pred eecCChhHHHHHHHHH
Q psy4160 122 WALEDKQEMIDIVETV 137 (160)
Q Consensus 122 ~~~~~kqe~iDiie~i 137 (160)
+. +.+++.+.|+.+
T Consensus 106 G~--~~~~l~~~l~~~ 119 (121)
T 2j23_A 106 GA--DPSKLQAAITQH 119 (121)
T ss_dssp SS--CHHHHHHHHHHH
T ss_pred CC--CHHHHHHHHHHh
Confidence 32 567777777653
No 19
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.63 E-value=0.00026 Score=46.52 Aligned_cols=85 Identities=18% Similarity=0.316 Sum_probs=63.7
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|+.+|-|.|.++...|.+++++.+.-..++.+|+++-|++.+.|.+..-+|+++|-+++.+..-.|
T Consensus 20 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g--------- 90 (109)
T 2yzu_A 20 LVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFKDGQPVEVLVG--------- 90 (109)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEES---------
T ss_pred eEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEeCCcEeeeEeC---------
Confidence 34899999999999999999999999887557889999999999999999977667666633443322222
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
. .+.++|.+.++.+
T Consensus 91 ~-~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 91 A-QPKRNYQAKIEKH 104 (109)
T ss_dssp C-CCHHHHHHHHHTT
T ss_pred C-CCHHHHHHHHHHH
Confidence 1 2457777777643
No 20
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.57 E-value=0.00036 Score=45.84 Aligned_cols=84 Identities=19% Similarity=0.321 Sum_probs=62.4
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..++-|..+|-|.|.++...|.+++++.+.-..++.||+++-|++.+.|.+.--+|+++|-+++-+. ++.+
T Consensus 20 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~---------~~~G 90 (105)
T 1fb6_A 20 PVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKE---------SIIG 90 (105)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE---------EEEE
T ss_pred cEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeCCeEEE---------EEec
Confidence 3489999999999999999999999988765778999999999999999996656765553333322 1222
Q ss_pred ecCChhHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVET 136 (160)
Q Consensus 123 ~~~~kqe~iDiie~ 136 (160)
. .+.+++.+.|+.
T Consensus 91 ~-~~~~~l~~~l~~ 103 (105)
T 1fb6_A 91 A-VPKSTLTDSIEK 103 (105)
T ss_dssp C-CCHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHh
Confidence 2 245677777664
No 21
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.56 E-value=0.00038 Score=49.23 Aligned_cols=85 Identities=14% Similarity=0.222 Sum_probs=64.9
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWA 123 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~~ 123 (160)
.||-|+.+|-+.|.++...|.+++++.+.-..++.||+++-+++.+-|.+..-+|+++|-+++-+. ++.+.
T Consensus 53 vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~---------~~~G~ 123 (140)
T 1v98_A 53 TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLFRRGAPVA---------TWVGA 123 (140)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE---------EEESC
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccCEEEEEeCCcEEE---------EEeCC
Confidence 789999999999999999999999988755788999999999999999997666765653333322 22222
Q ss_pred cCChhHHHHHHHHHh
Q psy4160 124 LEDKQEMIDIVETVY 138 (160)
Q Consensus 124 ~~~kqe~iDiie~iy 138 (160)
.+.++|.+.|+.+-
T Consensus 124 -~~~~~l~~~i~~~l 137 (140)
T 1v98_A 124 -SPRRVLEERLRPYL 137 (140)
T ss_dssp -CCHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHH
Confidence 34677888877654
No 22
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.56 E-value=0.00021 Score=47.07 Aligned_cols=83 Identities=18% Similarity=0.281 Sum_probs=63.1
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|+.+|-|.|.++...|.+++++.++-..++.||+++-|+..+.|.+..-+|+++|-+++-+.-=.|
T Consensus 21 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g--------- 91 (106)
T 3die_A 21 VQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVG--------- 91 (106)
T ss_dssp EEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEEEEEEES---------
T ss_pred cEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEEeCCeEEEEEeC---------
Confidence 34899999999999999999999999988768889999999999999999976667656643443322122
Q ss_pred ecCChhHHHHHHH
Q psy4160 123 ALEDKQEMIDIVE 135 (160)
Q Consensus 123 ~~~~kqe~iDiie 135 (160)
..+.+++...|+
T Consensus 92 -~~~~~~l~~~l~ 103 (106)
T 3die_A 92 -FQPKENLAEVLD 103 (106)
T ss_dssp -CCCHHHHHHHHH
T ss_pred -CCCHHHHHHHHH
Confidence 234566666665
No 23
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.55 E-value=0.0002 Score=48.76 Aligned_cols=82 Identities=15% Similarity=0.286 Sum_probs=61.8
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|+.+|-+.|.++...|.+++++.++ ..++.||+++-+++.+-|.+..-+|+++| ++.-+ +. ++.+
T Consensus 28 ~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~-~~-------~~~G 97 (112)
T 1syr_A 28 LVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDEVSEVTEKENITSMPTFKVY-KNGSS-VD-------TLLG 97 (112)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTTHHHHHHTTCCSSSEEEEE-ETTEE-EE-------EEES
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCCCHHHHHHcCCCcccEEEEE-ECCcE-EE-------EEeC
Confidence 458899999999999999999999998776 67788999999999999999665576555 44322 11 2333
Q ss_pred ecCChhHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVET 136 (160)
Q Consensus 123 ~~~~kqe~iDiie~ 136 (160)
. ++++|.+.|+.
T Consensus 98 ~--~~~~l~~~l~~ 109 (112)
T 1syr_A 98 A--NDSALKQLIEK 109 (112)
T ss_dssp C--CHHHHHHHHHT
T ss_pred C--CHHHHHHHHHH
Confidence 3 56777777764
No 24
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.54 E-value=0.00028 Score=48.25 Aligned_cols=92 Identities=12% Similarity=0.096 Sum_probs=70.0
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|..+|-+.|.++...|.+++++.+.-..++.||+++-+++.+-|.+..-+|+++|-+++.+ .++.+
T Consensus 23 ~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~~~~---------~~~~g 93 (122)
T 3aps_A 23 HWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAK---------KSIWE 93 (122)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEEGGG---------TEEEE
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEEEeCCCcc---------ceeec
Confidence 458999999999999999999999998875578889999999999999999776776555443321 23333
Q ss_pred e---cCChhHHHHHHHHHhhcccc
Q psy4160 123 A---LEDKQEMIDIVETVYRGARK 143 (160)
Q Consensus 123 ~---~~~kqe~iDiie~iyrga~k 143 (160)
. -.+.+++...|+.+-..+.+
T Consensus 94 ~~~~~~~~~~l~~~l~~~l~~~~~ 117 (122)
T 3aps_A 94 EQINSRDAKTIAALIYGKLETLQS 117 (122)
T ss_dssp EEECCSCHHHHHHHHHHHHHCC--
T ss_pred cccCcCCHHHHHHHHHHHHHhhhh
Confidence 3 14678999999888765543
No 25
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.52 E-value=0.00038 Score=46.71 Aligned_cols=85 Identities=18% Similarity=0.245 Sum_probs=63.4
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..++-|+.+|-|.|.++...|.+++++.+.-..++.||+++-++..+-|.+.--+|+++| ++.-+. . ++.+
T Consensus 25 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~G 95 (112)
T 1t00_A 25 PVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVY-QGGEVA-K-------TIVG 95 (112)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTEEE-E-------EEES
T ss_pred eEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEE-eCCEEE-E-------EEeC
Confidence 358999999999999999999999998865588899999999999999999766676555 443221 1 1222
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
. .+++++.+.|+.+
T Consensus 96 ~-~~~~~l~~~l~~~ 109 (112)
T 1t00_A 96 A-KPKAAIVRDLEDF 109 (112)
T ss_dssp C-CCHHHHHHHTHHH
T ss_pred C-CCHHHHHHHHHHH
Confidence 2 2457777777654
No 26
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.52 E-value=0.00017 Score=48.37 Aligned_cols=61 Identities=23% Similarity=0.343 Sum_probs=52.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRN 105 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrn 105 (160)
..++-|+.+|-+.|.++...|.+++++.++ ..++.||+++-|++.+.|.+..-+|++|| ++
T Consensus 23 ~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~ 83 (107)
T 1gh2_A 23 LAVVKFTMRGCGPCLRIAPAFSSMSNKYPQ-AVFLEVDVHQCQGTAATNNISATPTFQFF-RN 83 (107)
T ss_dssp CEEEEEECSSCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTSHHHHHHTTCCSSSEEEEE-ET
T ss_pred EEEEEEECCCChhhHHHHHHHHHHHHHCCC-cEEEEEECccCHHHHHhcCCCcccEEEEE-EC
Confidence 348999999999999999999999998765 67789999999999999999766687666 44
No 27
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.51 E-value=0.00027 Score=49.60 Aligned_cols=85 Identities=16% Similarity=0.285 Sum_probs=65.4
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
.++|-|+.+|-+.|.++...|.+++++.+.-..++.||+++-+++.+.|.+.--+|++||-++..+.. ..+
T Consensus 53 ~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~~g~~~~---------~~G 123 (141)
T 3hxs_A 53 PAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTIWFVPMKGEPQV---------NMG 123 (141)
T ss_dssp CEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEECSSSCCEE---------EES
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHHHcCCCCcCEEEEEeCCCCEEE---------EeC
Confidence 34899999999999999999999999888668889999999999999999977677655544443321 111
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
..+.++|...|+.+
T Consensus 124 -~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 124 -ALSKEQLKGYIDKV 137 (141)
T ss_dssp -CCCHHHHHHHHHHT
T ss_pred -CCCHHHHHHHHHHH
Confidence 23557787777654
No 28
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.51 E-value=0.00054 Score=45.72 Aligned_cols=85 Identities=14% Similarity=0.233 Sum_probs=64.7
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|+.+|-|.|.++...|.+++++.+.-..++.||+++-|++.+.|.+..-+|+++| ++..+.-. +.+
T Consensus 27 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~~~--------~~g 97 (115)
T 1thx_A 27 PVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLV-KGEQILDS--------TEG 97 (115)
T ss_dssp CEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEEE-ETTEEEEE--------EES
T ss_pred eEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEEE-cCCEEEEE--------ecC
Confidence 348999999999999999999999998775588899999999999999999766676566 55433221 112
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
..+.++|.+.|+.+
T Consensus 98 -~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 98 -VISKDKLLSFLDTH 111 (115)
T ss_dssp -CCCHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHH
Confidence 23567888888764
No 29
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.50 E-value=0.00034 Score=49.73 Aligned_cols=83 Identities=12% Similarity=0.167 Sum_probs=63.4
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..||-|+.+|-+.|.++...|.+++++.++ ..++.||+++-+++.+-|.+..-+|++|| ++..+. . ++.+
T Consensus 39 ~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~-~~G~~~-~-------~~~G 108 (125)
T 1r26_A 39 LTVAWFTAVWCGPCKTIERPMEKIAYEFPT-VKFAKVDADNNSEIVSKCRVLQLPTFIIA-RSGKML-G-------HVIG 108 (125)
T ss_dssp CEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTEEE-E-------EEES
T ss_pred EEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCcccEEEEE-eCCeEE-E-------EEeC
Confidence 458999999999999999999999998766 67789999999999999999776676555 543332 1 2333
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
.+.++|.+.|+.+
T Consensus 109 --~~~~~l~~~l~~~ 121 (125)
T 1r26_A 109 --ANPGMLRQKLRDI 121 (125)
T ss_dssp --SCHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHH
Confidence 1457777777764
No 30
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.49 E-value=0.00048 Score=45.71 Aligned_cols=85 Identities=21% Similarity=0.239 Sum_probs=62.9
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..++-|+.+|-|.|.++...|.+++++.+.-..++.||+++-|++.+-|.+.--+|+++|-+++-+. ++.+
T Consensus 21 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~---------~~~G 91 (107)
T 1dby_A 21 PVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCE---------TIIG 91 (107)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEESSSSEEE---------EEES
T ss_pred cEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEeCCEEEE---------EEeC
Confidence 3489999999999999999999999987755778899999999999999997666765553333322 1222
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
. .+.+++.+.|+.+
T Consensus 92 ~-~~~~~l~~~l~~~ 105 (107)
T 1dby_A 92 A-VPKATIVQTVEKY 105 (107)
T ss_dssp C-CCHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHH
Confidence 2 2457777777654
No 31
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.49 E-value=0.00045 Score=49.33 Aligned_cols=86 Identities=17% Similarity=0.275 Sum_probs=65.9
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWA 123 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~~ 123 (160)
++|-|+.+|-+.|.+|...|.+++++.+.-..++.||+++-+++.+.|.+..-+|+++| ++..+. +.-+|
T Consensus 58 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~~~-~~~~G-------- 127 (148)
T 3p2a_A 58 MVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIMLY-RNGKMI-DMLNG-------- 127 (148)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTEEE-EEESS--------
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEEEEE-ECCeEE-EEEeC--------
Confidence 58999999999999999999999998866678889999999999999999776676565 443332 22222
Q ss_pred cCChhHHHHHHHHHhh
Q psy4160 124 LEDKQEMIDIVETVYR 139 (160)
Q Consensus 124 ~~~kqe~iDiie~iyr 139 (160)
..+.++|...|+.+-.
T Consensus 128 ~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 128 AVPKAPFDNWLDEQLS 143 (148)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhc
Confidence 2346788888876543
No 32
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.49 E-value=0.00031 Score=48.82 Aligned_cols=81 Identities=20% Similarity=0.245 Sum_probs=61.6
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|..+|-+.|.++...|.+++++.++ ..++.||+++-+++.+-|.+..-+|+++| ++-.+. .++.+
T Consensus 32 ~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~~~--------~~~~G 101 (114)
T 2oe3_A 32 KLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPTFVLG-KDGQLI--------GKIIG 101 (114)
T ss_dssp EEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSEEEEE-ETTEEE--------EEEES
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccEEEEE-eCCeEE--------EEEeC
Confidence 348999999999999999999999998877 77889999999999999999766676555 543221 12333
Q ss_pred ecCChhHHHHHHH
Q psy4160 123 ALEDKQEMIDIVE 135 (160)
Q Consensus 123 ~~~~kqe~iDiie 135 (160)
.. +++|...|+
T Consensus 102 ~~--~~~l~~~l~ 112 (114)
T 2oe3_A 102 AN--PTALEKGIK 112 (114)
T ss_dssp SC--HHHHHHHHH
T ss_pred CC--HHHHHHHHH
Confidence 33 567766665
No 33
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.45 E-value=0.00024 Score=49.73 Aligned_cols=63 Identities=16% Similarity=0.260 Sum_probs=54.6
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCce
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKH 107 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkH 107 (160)
++|-|+.+|-+.|.+|...|.+++++.+.-..++.||+++-++..+-|.+.--+|+++| ++..
T Consensus 45 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~ 107 (128)
T 3ul3_B 45 IVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILL-KNKT 107 (128)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEE-ETTE
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEE-ECCE
Confidence 48999999999999999999999999887788899999999999999999776776666 4443
No 34
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.43 E-value=0.00029 Score=46.23 Aligned_cols=81 Identities=14% Similarity=0.257 Sum_probs=61.3
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWA 123 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~~ 123 (160)
.+|-|+.+|-|.|.++...|.+++++.++ ..++.+|+++-|++.+.|.+...+|+++|-+++.+. ++.+
T Consensus 22 ~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~---------~~~G- 90 (104)
T 2vim_A 22 IVVDFFAQWCGPCRNIAPKVEALAKEIPE-VEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDGKEVD---------RFSG- 90 (104)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE---------EEES-
T ss_pred EEEEEECCCCHHHHHhhHHHHHHHHHCCC-CEEEEEeccCCHHHHHHcCCccccEEEEEeCCcEEE---------EEeC-
Confidence 47899999999999999999999998764 667889999999999999997766766654344332 2223
Q ss_pred cCChhHHHHHHHH
Q psy4160 124 LEDKQEMIDIVET 136 (160)
Q Consensus 124 ~~~kqe~iDiie~ 136 (160)
. +.+++.+.|+.
T Consensus 91 ~-~~~~l~~~l~~ 102 (104)
T 2vim_A 91 A-NETKLRETITR 102 (104)
T ss_dssp S-CHHHHHHHHHH
T ss_pred C-CHHHHHHHHHh
Confidence 1 45677776654
No 35
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.43 E-value=0.00035 Score=49.41 Aligned_cols=88 Identities=15% Similarity=0.189 Sum_probs=63.2
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhc-ceEEEEEeCCcccccccccccc------ccceeeeeeeCceeEEecCCCC
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITKVPDFNKMYELY------DPCTCMFFFRNKHIMIDLGTGN 116 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvkn-favIYlvDi~~Vpdfn~myeL~------dP~tvmFFfrnkHm~vD~GTgn 116 (160)
++|-|..+|-+.|.+|...|.+++++.+. -..++.||+++-|++.+-|.+. --+|+++|-+++-+.-=.|.-+
T Consensus 29 vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~~~Pt~~~~~~G~~~~~~~G~~~ 108 (137)
T 2dj0_A 29 WIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGGKEAMRRPQIDK 108 (137)
T ss_dssp EEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSSCSSEEEEESSSSEEEEESCBCS
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcCCCCEEEEEECCEEEEEecCcCc
Confidence 48999999999999999999999998863 4678899999999999999986 5557666644443332234333
Q ss_pred CceeeeecCChhHHH
Q psy4160 117 NNKINWALEDKQEMI 131 (160)
Q Consensus 117 nnKin~~~~~kqe~i 131 (160)
...+.=.+..+..++
T Consensus 109 ~~~l~~~l~~~~~~~ 123 (137)
T 2dj0_A 109 KGRAVSWTFSEENVI 123 (137)
T ss_dssp SSCBCCCCCCHHHHH
T ss_pred hHHHHHHHhcccchh
Confidence 344444455554443
No 36
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.41 E-value=0.00078 Score=46.51 Aligned_cols=85 Identities=20% Similarity=0.294 Sum_probs=63.5
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|+.+|-+.|.++...|.+++++.+.-..++.||+++-+++.+.|.+..-+|+++| ++.-+.- ++.+
T Consensus 33 ~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~~~~--------~~~G 103 (119)
T 1w4v_A 33 PVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAM-KNGDVVD--------KFVG 103 (119)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEEEEE-ETTEEEE--------EEES
T ss_pred cEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEEEEE-eCCcEEE--------EEcC
Confidence 358999999999999999999999998765578889999999999999999766676565 5443321 1122
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
. .+.+++.+.|+.+
T Consensus 104 ~-~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 104 I-KDEDQLEAFLKKL 117 (119)
T ss_dssp C-CCHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHH
Confidence 1 2457787777654
No 37
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.40 E-value=0.00053 Score=48.13 Aligned_cols=86 Identities=17% Similarity=0.361 Sum_probs=65.0
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
.+||-|+.+|-+.|.++...|.+++++.++ ..++.||+++-+++.+-|.+.--+|+++| ++..+. . ++.+
T Consensus 48 ~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~G 117 (139)
T 3d22_A 48 IVLANFSARWCGPSRQIAPYYIELSENYPS-LMFLVIDVDELSDFSASWEIKATPTFFFL-RDGQQV-D-------KLVG 117 (139)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTSHHHHHHTTCCEESEEEEE-ETTEEE-E-------EEES
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEeCcccHHHHHHcCCCcccEEEEE-cCCeEE-E-------EEeC
Confidence 358999999999999999999999998765 56788999999999999999665566555 544332 1 2233
Q ss_pred ecCChhHHHHHHHHHhhc
Q psy4160 123 ALEDKQEMIDIVETVYRG 140 (160)
Q Consensus 123 ~~~~kqe~iDiie~iyrg 140 (160)
. +.+++.+.|+.+-.+
T Consensus 118 ~--~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 118 A--NKPELHKKITAILDS 133 (139)
T ss_dssp C--CHHHHHHHHHHHHHT
T ss_pred C--CHHHHHHHHHHHhcc
Confidence 3 467888888876654
No 38
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.39 E-value=0.00087 Score=44.70 Aligned_cols=83 Identities=20% Similarity=0.382 Sum_probs=62.2
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWA 123 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~~ 123 (160)
.|+-|+.+|-|.|.++...|.+++++.++ ..++.+|+++-|++.+.|.+..-+|+++| ++..+. . ++.+
T Consensus 29 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~g- 97 (113)
T 1ti3_A 29 IVVDFTASWCPPCKMIAPIFAELAKKFPN-VTFLKVDVDELKAVAEEWNVEAMPTFIFL-KDGKLV-D-------KTVG- 97 (113)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHCSS-EEEEEEETTTCHHHHHHHHCSSTTEEEEE-ETTEEE-E-------EEEC-
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHhCCC-cEEEEEEccccHHHHHhCCCCcccEEEEE-eCCEEE-E-------EEec-
Confidence 48899999999999999999999987664 67788999999999999999776676565 443322 1 1222
Q ss_pred cCChhHHHHHHHHHh
Q psy4160 124 LEDKQEMIDIVETVY 138 (160)
Q Consensus 124 ~~~kqe~iDiie~iy 138 (160)
. +.++|.+.|+.+-
T Consensus 98 ~-~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 98 A-DKDGLPTLVAKHA 111 (113)
T ss_dssp C-CTTHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHhh
Confidence 1 4577887777653
No 39
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.37 E-value=0.00076 Score=47.09 Aligned_cols=88 Identities=16% Similarity=0.274 Sum_probs=66.8
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc---eEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCce
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF---AVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNK 119 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf---avIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnK 119 (160)
.++|-|..+|-+.|.++...|.+++++.++- ..++.||+++-+++.+.|.+.--+|+++| ++..+ ..+ .|
T Consensus 36 ~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~-~~~-~g---- 108 (140)
T 2dj1_A 36 TVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIKIL-KKGQA-VDY-DG---- 108 (140)
T ss_dssp EEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEEEEE-ETTEE-EEC-CS----
T ss_pred eEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeEEEE-ECCcE-EEc-CC----
Confidence 3589999999999999999999999988765 77889999999999999999766676666 44322 221 12
Q ss_pred eeeecCChhHHHHHHHHHhhcc
Q psy4160 120 INWALEDKQEMIDIVETVYRGA 141 (160)
Q Consensus 120 in~~~~~kqe~iDiie~iyrga 141 (160)
..+.++|...|+..-..+
T Consensus 109 ----~~~~~~l~~~l~~~~~~~ 126 (140)
T 2dj1_A 109 ----SRTQEEIVAKVREVSQPD 126 (140)
T ss_dssp ----CCCHHHHHHHHHHHHSSS
T ss_pred ----CCCHHHHHHHHHHhcCCC
Confidence 235688888888765444
No 40
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.37 E-value=0.0014 Score=46.46 Aligned_cols=85 Identities=15% Similarity=0.240 Sum_probs=64.0
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|+.+|-+.|.++...|.+++++.+.-..++.||+++-+++.+-|.+.--+|+++| ++.-+.- ++.+
T Consensus 42 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~~~~--------~~~G 112 (128)
T 2o8v_B 42 AILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF-KNGEVAA--------TKVG 112 (128)
T ss_dssp EEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEE-ETTEEEE--------EEES
T ss_pred EEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEE-eCCEEEE--------EEcC
Confidence 358999999999999999999999998875578899999999999999999765676555 5433321 1222
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
. .+.++|.+.|+.+
T Consensus 113 ~-~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 113 A-LSKGQLKEFLDAN 126 (128)
T ss_dssp C-CCHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHh
Confidence 2 2467788777653
No 41
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.35 E-value=0.00018 Score=49.77 Aligned_cols=87 Identities=15% Similarity=0.136 Sum_probs=65.1
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|..+|-+.|.++...|.+++++.++...++.||+++-+++.+.|.+.--+|++||-+++.+.. ++.+
T Consensus 37 ~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~~~~~--------~~~G 108 (130)
T 2dml_A 37 LWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNKPE--------DYQG 108 (130)
T ss_dssp CEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEEEEESSCTTSCE--------ECCS
T ss_pred eEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCCCeEE--------Eeec
Confidence 45899999999999999999999999988878889999999999999999977677655543333111 2222
Q ss_pred ecCChhHHHHHHHHHh
Q psy4160 123 ALEDKQEMIDIVETVY 138 (160)
Q Consensus 123 ~~~~kqe~iDiie~iy 138 (160)
..+.++|++.++..-
T Consensus 109 -~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 109 -GRTGEAIVDAALSAL 123 (130)
T ss_dssp -CCSHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHH
Confidence 234567777665543
No 42
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.34 E-value=0.00074 Score=45.39 Aligned_cols=87 Identities=20% Similarity=0.336 Sum_probs=63.6
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
-.+|-|+.+|-|.|.++...|.+++++.++ ..++.||+++-+++.+-|.+..-+|++|| ++..+. + ++.+
T Consensus 30 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~g~~~-~-------~~~g 99 (118)
T 2vm1_A 30 LVIIDFTASWCGPCRVIAPVFAEYAKKFPG-AIFLKVDVDELKDVAEAYNVEAMPTFLFI-KDGEKV-D-------SVVG 99 (118)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTSHHHHHHTTCCSBSEEEEE-ETTEEE-E-------EEES
T ss_pred EEEEEEECCCCHhHHHHhHHHHHHHHHCCC-cEEEEEEcccCHHHHHHcCCCcCcEEEEE-eCCeEE-E-------EecC
Confidence 358999999999999999999999998765 56788999999999999999776676555 543221 1 1222
Q ss_pred ecCChhHHHHHHHHHhhcc
Q psy4160 123 ALEDKQEMIDIVETVYRGA 141 (160)
Q Consensus 123 ~~~~kqe~iDiie~iyrga 141 (160)
.+.+++.+.|+.+-..+
T Consensus 100 --~~~~~l~~~l~~~~~~~ 116 (118)
T 2vm1_A 100 --GRKDDIHTKIVALMGSA 116 (118)
T ss_dssp --CCHHHHHHHHHHHHC--
T ss_pred --CCHHHHHHHHHHHhccc
Confidence 14578888887765443
No 43
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.30 E-value=0.0007 Score=44.88 Aligned_cols=65 Identities=20% Similarity=0.206 Sum_probs=53.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhh---cceEEEEEeCCccccccccccccccceeeeeeeCce
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVK---NFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKH 107 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvk---nfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkH 107 (160)
..+|-|..+|-+.|.++...|.+++++.+ .-..++.||+++-+++.+-|.+.--+|+++|-+++.
T Consensus 23 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~ 90 (111)
T 3uvt_A 23 ITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGGKK 90 (111)
T ss_dssp EEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred cEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEEEEeCCcE
Confidence 45899999999999999999999998754 246778999999999999999976567666644443
No 44
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.27 E-value=0.0003 Score=49.07 Aligned_cols=91 Identities=14% Similarity=0.230 Sum_probs=64.8
Q ss_pred hhhhccCCCChhhhhhHHHHH--HHHHhhhcceEEEEEeC---Cccccccccccc---cccceeeee-eeCceeEEecCC
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLY--SIAEKVKNFAVIYLVDI---TKVPDFNKMYEL---YDPCTCMFF-FRNKHIMIDLGT 114 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~--kia~kvknfavIYlvDi---~~Vpdfn~myeL---~dP~tvmFF-frnkHm~vD~GT 114 (160)
++|-|+.+|-+.|.+|..+|. +++++.++-..++.||+ ++-+++.+-|.+ .--+|++|| -+++-+.--.|.
T Consensus 32 vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~ 111 (133)
T 3fk8_A 32 TLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGG 111 (133)
T ss_dssp EEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEECCSC
T ss_pred EEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEEEecCC
Confidence 489999999999999999999 99998866678889999 899999999998 666665444 234333332332
Q ss_pred CCCceeeeecCChhHHHHHHHHH
Q psy4160 115 GNNNKINWALEDKQEMIDIVETV 137 (160)
Q Consensus 115 gnnnKin~~~~~kqe~iDiie~i 137 (160)
.-.+. ...+.+++.+.++.+
T Consensus 112 ~~~~~---~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 112 ELANA---RKMSDQGIYDFFAKI 131 (133)
T ss_dssp TTTTG---GGSCHHHHHHHHHHH
T ss_pred ccccc---ccCCHHHHHHHHHHh
Confidence 21111 244567777777654
No 45
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.26 E-value=0.00067 Score=45.93 Aligned_cols=64 Identities=17% Similarity=0.287 Sum_probs=53.3
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNK 106 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnk 106 (160)
..+|-|+.+|-|.|.++...|.+++++.++-..++.||+++-|.+.+-|.+.--+|+++|-+++
T Consensus 32 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~ 95 (121)
T 2i1u_A 32 PVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQ 95 (121)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred cEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEEEEECCE
Confidence 3489999999999999999999999987655788999999999999999997666765553333
No 46
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.25 E-value=0.0013 Score=45.45 Aligned_cols=92 Identities=18% Similarity=0.180 Sum_probs=65.7
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhh--cceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCcee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVK--NFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKI 120 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvk--nfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKi 120 (160)
.++|-|..+|-+.|.+|...|.+++++.+ .-..++.||+++-+...+-|.+.--+|++||-+++.+. .-++
T Consensus 27 ~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~-------~~~~ 99 (133)
T 2dj3_A 27 DVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYFAPSGDKKN-------PIKF 99 (133)
T ss_dssp EEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEEEEECTTCTTS-------CEEC
T ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEEEEEeCCCccc-------ceEe
Confidence 45899999999999999999999999886 34677889999999888888987766765553332111 0012
Q ss_pred eeecCChhHHHHHHHHHhhcc
Q psy4160 121 NWALEDKQEMIDIVETVYRGA 141 (160)
Q Consensus 121 n~~~~~kqe~iDiie~iyrga 141 (160)
.+...+.++|...|+..-...
T Consensus 100 ~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 100 EGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp CSSCCSTTHHHHHHHHHSSSC
T ss_pred cCCCcCHHHHHHHHHHhcccc
Confidence 212346688888888765433
No 47
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.23 E-value=0.001 Score=45.89 Aligned_cols=93 Identities=18% Similarity=0.185 Sum_probs=68.0
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEe--CCccccccccccccccceeeeeeeCceeEEecCCCCCcee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVD--ITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKI 120 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvD--i~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKi 120 (160)
..+|-|+.+|-|.|.++...|.+++++.+.-..++.|| +++-+++.+.|.+.--+|+++|-++..+. .++
T Consensus 28 ~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~--------~~~ 99 (126)
T 2l57_A 28 PTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKF--------YVH 99 (126)
T ss_dssp CEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEE--------EEE
T ss_pred cEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEE--------EEe
Confidence 34889999999999999999999999876557788899 99999999999986656654443122111 112
Q ss_pred eeecCChhHHHHHHHHHhhccccC
Q psy4160 121 NWALEDKQEMIDIVETVYRGARKG 144 (160)
Q Consensus 121 n~~~~~kqe~iDiie~iyrga~kG 144 (160)
.+ ..++++|.+.|+.....+..|
T Consensus 100 ~G-~~~~~~l~~~l~~~~~~~~~~ 122 (126)
T 2l57_A 100 QG-LMRKNNIETILNSLGVKEGHH 122 (126)
T ss_dssp ES-CCCHHHHHHHHHHHCCCCCCC
T ss_pred cC-CCCHHHHHHHHHHHhcccccc
Confidence 22 346789999999887666544
No 48
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.22 E-value=0.0014 Score=48.25 Aligned_cols=85 Identities=13% Similarity=0.195 Sum_probs=64.9
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
.+||-|+.+|-+.|.++...|.+++++.+.-..++.||+++-|+..+-|.+..-+|+++| ++-.+. + ++.+
T Consensus 66 ~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~-~~G~~~-~-------~~~G 136 (155)
T 2ppt_A 66 PLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILF-HKGREL-A-------RAAG 136 (155)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEEEE-ETTEEE-E-------EEES
T ss_pred cEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEEEE-eCCeEE-E-------EecC
Confidence 358999999999999999999999998875578899999999999999999766676666 544332 1 1222
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
. .+++++...|+..
T Consensus 137 ~-~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 137 A-RPASELVGFVRGK 150 (155)
T ss_dssp C-CCHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHH
Confidence 2 2567788877764
No 49
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.20 E-value=0.00079 Score=44.49 Aligned_cols=62 Identities=18% Similarity=0.337 Sum_probs=52.5
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRN 105 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrn 105 (160)
..++-|+.+|-|.|.++...|.+++++.+.-..++.+|+++-++..+-|.+.--+|+++| ++
T Consensus 19 ~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~ 80 (105)
T 1nsw_A 19 PVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILF-KG 80 (105)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE-ET
T ss_pred cEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEE-eC
Confidence 358899999999999999999999998776678899999999999999998665666565 44
No 50
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.20 E-value=0.00052 Score=49.77 Aligned_cols=62 Identities=13% Similarity=0.083 Sum_probs=50.5
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCcee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm 108 (160)
-+|+.|..+|-++|..|+.+|.++|++-.+ ..++-||+++.+ +-|.+..=+|+++|-+++-+
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~la~~~~~-v~f~kvd~d~~~---~~~~v~~~PT~~~fk~G~~v 86 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLLARKFPE-TKFVKAIVNSCI---QHYHDNCLPTIFVYKNGQIE 86 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHCTT-SEEEEEEGGGTS---TTCCGGGCSEEEEEETTEEE
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHHHHCCC-CEEEEEEhHHhH---HHCCCCCCCEEEEEECCEEE
Confidence 468999999999999999999999998665 567899999874 66777666787777666544
No 51
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.19 E-value=0.0013 Score=41.78 Aligned_cols=79 Identities=13% Similarity=0.237 Sum_probs=59.7
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWA 123 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~~ 123 (160)
.|+-|+.+|-|.|.++...|.+++++.+.-..++.+|+++-++..+-|.+.--+|+++ +++- ++.+.
T Consensus 5 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-----------~~~G~ 71 (85)
T 1fo5_A 5 KIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV-----------EFIGA 71 (85)
T ss_dssp EEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE-----------ECCSS
T ss_pred EEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE-----------eeecC
Confidence 3677999999999999999999999877557789999999999999999876556433 4432 22332
Q ss_pred cCChhHHHHHHHH
Q psy4160 124 LEDKQEMIDIVET 136 (160)
Q Consensus 124 ~~~kqe~iDiie~ 136 (160)
.+.+++...++.
T Consensus 72 -~~~~~l~~~l~~ 83 (85)
T 1fo5_A 72 -PTKEALVEAIKK 83 (85)
T ss_dssp -SSSHHHHHHHHH
T ss_pred -CCHHHHHHHHHH
Confidence 255777777764
No 52
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.19 E-value=0.0018 Score=41.13 Aligned_cols=80 Identities=14% Similarity=0.113 Sum_probs=60.5
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWA 123 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~~ 123 (160)
.|+-|+.+|-|.|.++...|.+++++.+.-..++.+|+++-|+..+-|.+..-+|+++ +++. ++.+.
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-----------~~~G~ 70 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV-----------RFVGA 70 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE-----------EEECS
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE-----------EEccC
Confidence 3677999999999999999999999877556778999999999999999876556433 4432 23332
Q ss_pred cCChhHHHHHHHHH
Q psy4160 124 LEDKQEMIDIVETV 137 (160)
Q Consensus 124 ~~~kqe~iDiie~i 137 (160)
.+.+++...++..
T Consensus 71 -~~~~~l~~~l~~~ 83 (85)
T 1nho_A 71 -PSREELFEAINDE 83 (85)
T ss_dssp -SCCHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHH
Confidence 3567787777643
No 53
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.16 E-value=0.00095 Score=45.90 Aligned_cols=88 Identities=15% Similarity=0.153 Sum_probs=66.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhh----cceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVK----NFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNN 118 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvk----nfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnn 118 (160)
..+|-|..+|-+.|.+|...|.+++++.+ .-..++.||+++-+++.+-|.+.--+|+++|-+++ + +.--.|
T Consensus 27 ~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~-~-~~~~~G--- 101 (133)
T 1x5d_A 27 VWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGE-S-PVDYDG--- 101 (133)
T ss_dssp EEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSSEEEEEETTE-E-EEEECS---
T ss_pred eEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeCeEEEEeCCC-c-eEEecC---
Confidence 35899999999999999999999999886 55788999999999999999997666765554444 2 221122
Q ss_pred eeeeecCChhHHHHHHHHHhhc
Q psy4160 119 KINWALEDKQEMIDIVETVYRG 140 (160)
Q Consensus 119 Kin~~~~~kqe~iDiie~iyrg 140 (160)
..+.++|...|+.....
T Consensus 102 -----~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 102 -----GRTRSDIVSRALDLFSD 118 (133)
T ss_dssp -----CCSHHHHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHhhc
Confidence 23567888888776544
No 54
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.16 E-value=0.00055 Score=45.69 Aligned_cols=87 Identities=17% Similarity=0.183 Sum_probs=62.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhc---ceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCce
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKN---FAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNK 119 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvkn---favIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnK 119 (160)
..+|-|+.+|-|.|.++...|.+++++.+. -..++.||.++-+++.+.|.+.--+|+++|-+++-+...--+|
T Consensus 26 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~g---- 101 (120)
T 1mek_A 26 YLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTA---- 101 (120)
T ss_dssp EEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEEEEEESSCSSSCEECCC----
T ss_pred eEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEEEEEeCCCcCCcccccC----
Confidence 358999999999999999999999998763 3566789999999999999997767766663333221011122
Q ss_pred eeeecCChhHHHHHHHHH
Q psy4160 120 INWALEDKQEMIDIVETV 137 (160)
Q Consensus 120 in~~~~~kqe~iDiie~i 137 (160)
..+.++|...++..
T Consensus 102 ----~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 102 ----GREADDIVNWLKKR 115 (120)
T ss_dssp ----CSSHHHHHHHHHTT
T ss_pred ----ccCHHHHHHHHHhc
Confidence 23557777777643
No 55
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.12 E-value=0.00083 Score=46.73 Aligned_cols=59 Identities=22% Similarity=0.312 Sum_probs=51.0
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFF 102 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFF 102 (160)
.++|-|+.+|-+.|.++...|.+++++. +-..++.||+++-+++.+-|.+..-+|++||
T Consensus 25 ~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~ 83 (118)
T 2f51_A 25 LVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGNAADAYGVSSIPALFFV 83 (118)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHhcCCCCCCEEEEE
Confidence 4589999999999999999999999987 4467789999999999999999776776555
No 56
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.12 E-value=0.0021 Score=44.27 Aligned_cols=82 Identities=21% Similarity=0.303 Sum_probs=62.1
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhc-ceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvkn-favIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
++|-|..+|-+.|.++...|.+++++.+. -..++.||+++-+++.+-|.+.--+|+++| ++..+ .--+|.
T Consensus 25 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~--~~~~G~------ 95 (126)
T 1x5e_A 25 WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYHC-KDGEF--RRYQGP------ 95 (126)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTEE--EECCSC------
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEEE-eCCeE--EEeecC------
Confidence 78999999999999999999999998764 456788999999999999999766676666 55443 222222
Q ss_pred ecCChhHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVET 136 (160)
Q Consensus 123 ~~~~kqe~iDiie~ 136 (160)
.+.++|...|+.
T Consensus 96 --~~~~~l~~~l~~ 107 (126)
T 1x5e_A 96 --RTKKDFINFISD 107 (126)
T ss_dssp --CCHHHHHHHHHT
T ss_pred --CCHHHHHHHHHH
Confidence 245677777664
No 57
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.11 E-value=0.00076 Score=45.37 Aligned_cols=84 Identities=17% Similarity=0.356 Sum_probs=59.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhh--hcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCcee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKV--KNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKI 120 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kv--knfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKi 120 (160)
..++-|+.+|-+.|.++...|.+++++. ++ ..++.||+++-|++.+-|.+.--+|+++| ++..+ ++- +
T Consensus 23 ~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~-~~~-------~ 92 (112)
T 3d6i_A 23 LIVLYFHTSWAEPCKALKQVFEAISNEPSNSN-VSFLSIDADENSEISELFEISAVPYFIII-HKGTI-LKE-------L 92 (112)
T ss_dssp CEEEEEECCC--CHHHHHHHHHHHHHCGGGTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTEE-EEE-------E
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHhcCCCC-EEEEEEecccCHHHHHHcCCCcccEEEEE-ECCEE-EEE-------e
Confidence 3588999999999999999999999974 34 67889999999999999999766676555 44332 222 2
Q ss_pred eeecCChhHHHHHHHHHh
Q psy4160 121 NWALEDKQEMIDIVETVY 138 (160)
Q Consensus 121 n~~~~~kqe~iDiie~iy 138 (160)
.+. +.+++.+.|+.+-
T Consensus 93 ~G~--~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 93 SGA--DPKEYVSLLEDCK 108 (112)
T ss_dssp CSC--CHHHHHHHHHHHH
T ss_pred cCC--CHHHHHHHHHHHH
Confidence 222 1245777776654
No 58
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.10 E-value=0.0036 Score=48.22 Aligned_cols=89 Identities=16% Similarity=0.283 Sum_probs=68.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
-++|-|..+|-+.|.+|...|.+++++.+.-..++.||+++-++..+-|.+.--+|+++| ++..+.- ++.+
T Consensus 32 ~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~~~~--------~~~G 102 (222)
T 3dxb_A 32 AILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF-KNGEVAA--------TKVG 102 (222)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSEEEEE-ETTEEEE--------EEES
T ss_pred EEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCEEEEE-ECCeEEE--------Eecc
Confidence 358999999999999999999999999887678899999999999999999766676555 4332221 1222
Q ss_pred ecCChhHHHHHHHHHhhcc
Q psy4160 123 ALEDKQEMIDIVETVYRGA 141 (160)
Q Consensus 123 ~~~~kqe~iDiie~iyrga 141 (160)
..+.++|.+.|+.+-.+.
T Consensus 103 -~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 103 -ALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp -CCCHHHHHHHHHHHSCCS
T ss_pred -ccChHHHHHHHHhhcccc
Confidence 245688999888876543
No 59
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.09 E-value=0.002 Score=44.21 Aligned_cols=82 Identities=12% Similarity=0.235 Sum_probs=59.1
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCC-ccccccccccccccceeeeeeeCceeEEecCCCCCceee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT-KVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKIN 121 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~-~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin 121 (160)
..++-|+.+|-|.|.++...|.+++++.++ ..++.||++ +-++..+-|.+.--+|+++| ++..+. + ++.
T Consensus 39 ~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~ 108 (124)
T 1faa_A 39 PVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPTFKIL-KENSVV-G-------EVT 108 (124)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSSSSEEEEE-ETTEEE-E-------EEE
T ss_pred EEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcchHHHHHHcCCCeeeEEEEE-eCCcEE-E-------EEc
Confidence 348999999999999999999999998776 567889997 68888888888665575444 543322 1 122
Q ss_pred eecCChhHHHHHHHH
Q psy4160 122 WALEDKQEMIDIVET 136 (160)
Q Consensus 122 ~~~~~kqe~iDiie~ 136 (160)
+. +.+++.+.|+.
T Consensus 109 G~--~~~~l~~~i~~ 121 (124)
T 1faa_A 109 GA--KYDKLLEAIQA 121 (124)
T ss_dssp SS--CHHHHHHHHHH
T ss_pred CC--CHHHHHHHHHH
Confidence 22 24677777765
No 60
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.07 E-value=0.00045 Score=51.27 Aligned_cols=98 Identities=8% Similarity=0.028 Sum_probs=68.9
Q ss_pred hHHhhhhhhhhccCCCChhhhhhHHHHHHHHHhh--hcceEEEEEeCCcc--ccccccccccccceeeeeeeCceeEEec
Q psy4160 37 EIEDQCEDVIRFGHDWDPTCMKMDEVLYSIAEKV--KNFAVIYLVDITKV--PDFNKMYELYDPCTCMFFFRNKHIMIDL 112 (160)
Q Consensus 37 ~~d~rc~~viRFGrd~dp~Cm~mDevL~kia~kv--knfavIYlvDi~~V--pdfn~myeL~dP~tvmFFfrnkHm~vD~ 112 (160)
+-+....+++-|..+|=+.|.+|++.+....++. .+.+.+..||+++- ++....|.+.-++|++||=+++-+.
T Consensus 14 ~~~~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~--- 90 (116)
T 3dml_A 14 DDDKAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESG--- 90 (116)
T ss_dssp -----CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEE---
T ss_pred ccccCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEe---
Confidence 3344566789999999999999998766553321 12256789999874 5788999999999988886565442
Q ss_pred CCCCCceeeeecCChhHHHHHHHHHhhccccC
Q psy4160 113 GTGNNNKINWALEDKQEMIDIVETVYRGARKG 144 (160)
Q Consensus 113 GTgnnnKin~~~~~kqe~iDiie~iyrga~kG 144 (160)
++.+.+. +++|...++.+-.++..|
T Consensus 91 ------Ri~G~~~-~~~f~~~L~~~l~~~~~~ 115 (116)
T 3dml_A 91 ------RLEGYPG-EDFFWPMLARLIGQAEPG 115 (116)
T ss_dssp ------EEECCCC-HHHHHHHHHHHHHHHC--
T ss_pred ------eecCCCC-HHHHHHHHHHHHhhcCCC
Confidence 6777665 489999999887666554
No 61
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.07 E-value=0.0017 Score=44.14 Aligned_cols=84 Identities=12% Similarity=0.191 Sum_probs=62.6
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|..+|-+.|.++...|.+++++.+.-..++.||+++-+++.+-|.+..-+|+++| ++..+. . ++.+
T Consensus 19 ~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~G 89 (112)
T 2voc_A 19 VVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVL-KDGEVV-E-------TSVG 89 (112)
T ss_dssp EEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEE-ETTEEE-E-------EEES
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEE-eCCEEE-E-------EEeC
Confidence 347899999999999999999999998876578899999999999999999666666565 544332 1 1222
Q ss_pred ecCChhHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVET 136 (160)
Q Consensus 123 ~~~~kqe~iDiie~ 136 (160)
. .++++|.+.++.
T Consensus 90 ~-~~~~~l~~~l~~ 102 (112)
T 2voc_A 90 F-KPKEALQELVNK 102 (112)
T ss_dssp C-CCHHHHHHHHHT
T ss_pred C-CCHHHHHHHHHH
Confidence 2 245677776653
No 62
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.01 E-value=0.001 Score=46.30 Aligned_cols=84 Identities=11% Similarity=0.027 Sum_probs=62.8
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhh-----cceEEEEEeCCccccccccccccccceeeeeeeCceeE-EecCCCC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVK-----NFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIM-IDLGTGN 116 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvk-----nfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~-vD~GTgn 116 (160)
.++|-|.-+|-+.|.+|..++.++|++.+ .-..++.||.++-+++.+-|.+.--+|+++|-+++.+. ..+
T Consensus 35 ~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~---- 110 (127)
T 3h79_A 35 DVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGFPTMRYYTRIDKQEPFEY---- 110 (127)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEECSSCSSSCEEC----
T ss_pred CEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccCCEEEEEeCCCCCCceEe----
Confidence 45899999999999999999999998754 34778899999999999999998777876665444322 222
Q ss_pred CceeeeecCChhHHHHHHH
Q psy4160 117 NNKINWALEDKQEMIDIVE 135 (160)
Q Consensus 117 nnKin~~~~~kqe~iDiie 135 (160)
.+ ..+.++++..|+
T Consensus 111 ----~G-~~~~~~l~~~i~ 124 (127)
T 3h79_A 111 ----SG-QRYLSLVDSFVF 124 (127)
T ss_dssp ----CS-CCCHHHHHHHHH
T ss_pred ----cC-CccHHHHHHHHH
Confidence 22 235567766665
No 63
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.99 E-value=0.0032 Score=44.17 Aligned_cols=83 Identities=20% Similarity=0.343 Sum_probs=62.1
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..||-|..+|-|.|.++...|.+++++.++ ..++.||+++-+++.+-|.+.--+|++|| ++..+. + ++.+
T Consensus 40 ~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~G 109 (124)
T 1xfl_A 40 LVVVDFTASWCGPCRFIAPFFADLAKKLPN-VLFLKVDTDELKSVASDWAIQAMPTFMFL-KEGKIL-D-------KVVG 109 (124)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHCSS-EEEEEEETTTSHHHHHHTTCCSSSEEEEE-ETTEEE-E-------EEES
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECccCHHHHHHcCCCccCEEEEE-ECCEEE-E-------EEeC
Confidence 358999999999999999999999998765 66788999999999999999665676555 543332 1 2233
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
. +.+++.+.|+..
T Consensus 110 -~-~~~~l~~~l~~~ 122 (124)
T 1xfl_A 110 -A-KKDELQSTIAKH 122 (124)
T ss_dssp -C-CHHHHHHHHHHH
T ss_pred -C-CHHHHHHHHHHh
Confidence 1 467787777653
No 64
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.95 E-value=0.0026 Score=43.26 Aligned_cols=80 Identities=18% Similarity=0.304 Sum_probs=58.6
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWA 123 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~~ 123 (160)
.++-|..+|-+.|.++...|.+++++. -..++.||+++-+++.+-|.+.--+|+++| ++..+. + ++.+
T Consensus 36 ~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~~~-~-------~~~G- 103 (117)
T 2xc2_A 36 VVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEETARKYNISAMPTFIAI-KNGEKV-G-------DVVG- 103 (117)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHHHHHHTTCCSSSEEEEE-ETTEEE-E-------EEES-
T ss_pred EEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHHHHHHcCCCccceEEEE-eCCcEE-E-------EEeC-
Confidence 488999999999999999999998865 356788999999999999999766676555 543221 1 2223
Q ss_pred cCChhHHHHHHHH
Q psy4160 124 LEDKQEMIDIVET 136 (160)
Q Consensus 124 ~~~kqe~iDiie~ 136 (160)
.+.+++.+.|+.
T Consensus 104 -~~~~~l~~~l~~ 115 (117)
T 2xc2_A 104 -ASIAKVEDMIKK 115 (117)
T ss_dssp -SCHHHHHHHHHH
T ss_pred -CCHHHHHHHHHH
Confidence 135667776654
No 65
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.91 E-value=0.00073 Score=46.30 Aligned_cols=87 Identities=20% Similarity=0.295 Sum_probs=64.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|..+|-+.|.++...|.+++++.++ ..++.||+++-+++.+-|.+.--+|+++|-+++.+ . ++.+
T Consensus 38 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~--~-------~~~g 107 (130)
T 1wmj_A 38 VVIIDFTASWCGPCRFIAPVFAEYAKKFPG-AVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEA--D-------KVVG 107 (130)
T ss_dssp BCBEECCSSSCSCSSSSHHHHHHHHHHCTT-BCCEECCTTTSGGGHHHHTCCSSCCCCBCTTTTCC--B-------CCCT
T ss_pred EEEEEEECCCChhHHHHHHHHHHHHHHCCC-CEEEEEeccchHHHHHHcCCCccceEEEEeCCeEE--E-------EEeC
Confidence 358999999999999999999999998765 56788999999999999999665576555333322 1 2222
Q ss_pred ecCChhHHHHHHHHHhhcc
Q psy4160 123 ALEDKQEMIDIVETVYRGA 141 (160)
Q Consensus 123 ~~~~kqe~iDiie~iyrga 141 (160)
. +.+++.+.|+.+-..+
T Consensus 108 -~-~~~~l~~~l~~~~~~~ 124 (130)
T 1wmj_A 108 -A-RKDDLQNTIVKHVGAT 124 (130)
T ss_dssp -T-CTTTHHHHHHHHTSSS
T ss_pred -C-CHHHHHHHHHHHHhcc
Confidence 1 4578888888765543
No 66
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=96.89 E-value=0.0037 Score=44.12 Aligned_cols=85 Identities=16% Similarity=0.247 Sum_probs=63.5
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..+|-|..+|-+.|.++...|.+++++.++-..++.||+++-+++.+-|.+.--+|+++|=++..+. . ..+
T Consensus 40 ~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~~~-~--------~~G 110 (136)
T 2l5l_A 40 PAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKPE-M--------AQG 110 (136)
T ss_dssp CEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSCCE-E--------EES
T ss_pred EEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCcEE-E--------EeC
Confidence 4589999999999999999999999988766788999999999999999997666754441322221 1 122
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
..+.++|...|+..
T Consensus 111 -~~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 111 -AMPKASFKKAIDEF 124 (136)
T ss_dssp -CCCHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHH
Confidence 23567788777755
No 67
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=96.85 E-value=0.0029 Score=48.10 Aligned_cols=86 Identities=13% Similarity=0.070 Sum_probs=65.9
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
.++|-|..+|-+.|.++...|.+++++.+.-..++.||+++-+++.+.|.+.--+|+++| ++..+ +.--+|
T Consensus 116 ~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~~-~~~~~G------- 186 (210)
T 3apq_A 116 LWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIF-RSGMA-AVKYNG------- 186 (210)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEE-CTTSC-CEECCS-------
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEEEE-ECCCc-eeEecC-------
Confidence 348999999999999999999999998877788899999999999999999765676566 54333 222222
Q ss_pred ecCChhHHHHHHHHHh
Q psy4160 123 ALEDKQEMIDIVETVY 138 (160)
Q Consensus 123 ~~~~kqe~iDiie~iy 138 (160)
..+.++|...|+..-
T Consensus 187 -~~~~~~l~~~i~~~l 201 (210)
T 3apq_A 187 -DRSKESLVAFAMQHV 201 (210)
T ss_dssp -CCCHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHhC
Confidence 235678888877654
No 68
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=96.78 E-value=0.0022 Score=43.15 Aligned_cols=83 Identities=11% Similarity=0.187 Sum_probs=59.7
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCC-ccccccccccccccceeeeeeeCceeEEecCCCCCceee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT-KVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKIN 121 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~-~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin 121 (160)
..+|-|..+|-|.|.++...|.+++++.++ ..++.||++ +-+++.+-|.+.--+|+++ |++..+. + ++.
T Consensus 26 ~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~~~~~~~~v~~~Pt~~~-~~~G~~~-~-------~~~ 95 (111)
T 2pu9_C 26 PVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPTFKI-LKENSVV-G-------EVT 95 (111)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSBSSEEEE-ESSSSEE-E-------EEE
T ss_pred EEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchHHHHHHcCCCeeeEEEE-EeCCcEE-E-------EEc
Confidence 348999999999999999999999998777 567889998 7888888888866556544 4443221 1 222
Q ss_pred eecCChhHHHHHHHHH
Q psy4160 122 WALEDKQEMIDIVETV 137 (160)
Q Consensus 122 ~~~~~kqe~iDiie~i 137 (160)
+. +.+++...|+.+
T Consensus 96 G~--~~~~l~~~l~~~ 109 (111)
T 2pu9_C 96 GA--KYDKLLEAIQAA 109 (111)
T ss_dssp SS--CHHHHHHHHHHH
T ss_pred CC--CHHHHHHHHHHh
Confidence 22 256777777653
No 69
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.76 E-value=0.0012 Score=46.88 Aligned_cols=90 Identities=13% Similarity=0.130 Sum_probs=63.3
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeC---------CccccccccccccccceeeeeeeCceeEEecC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDI---------TKVPDFNKMYELYDPCTCMFFFRNKHIMIDLG 113 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi---------~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~G 113 (160)
.++|-|+.+|-++|.++...|.+++++.+ ..++.||+ ++-++..+-|.+.--+|++||-+++ + ++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~~G~-~-v~-- 106 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYKEGR-I-VD-- 106 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEETTE-E-EE--
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEcCCE-E-EE--
Confidence 67899999999999999999999998766 67788999 8888888888885544865554333 2 11
Q ss_pred CCCCceeeeecCChhHHHHHHHHHhhccccC
Q psy4160 114 TGNNNKINWALEDKQEMIDIVETVYRGARKG 144 (160)
Q Consensus 114 TgnnnKin~~~~~kqe~iDiie~iyrga~kG 144 (160)
++.+ ..+++.+..+++....+..++
T Consensus 107 -----~~~G-~~~~~~~~~~i~~~~~~~~~~ 131 (135)
T 3emx_A 107 -----KLVG-ATPWSLKVEKAREIYGGEGHH 131 (135)
T ss_dssp -----EEES-CCCHHHHHHHHHHHC------
T ss_pred -----EEeC-CCCHHHHHHHHHHHhCCCccc
Confidence 2222 245677888888877665443
No 70
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=96.75 E-value=0.0014 Score=50.10 Aligned_cols=86 Identities=12% Similarity=0.036 Sum_probs=69.9
Q ss_pred hhhhhccCCCC--hhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCcee
Q psy4160 43 EDVIRFGHDWD--PTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKI 120 (160)
Q Consensus 43 ~~viRFGrd~d--p~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKi 120 (160)
-+|+-|+-+|- ++|..|-=+|..+|++...-..++-||+++-|+.-.-|.+..=+|++||=+++-+ .++
T Consensus 35 ~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTlilFkdG~~v---------~~~ 105 (137)
T 2qsi_A 35 IVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSLAVVQPERTL---------GVI 105 (137)
T ss_dssp EEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEEEEEECCEEE---------EEE
T ss_pred cEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEEEEEECCEEE---------EEE
Confidence 47899999999 9999999999999998877788999999999999999999888898888655544 244
Q ss_pred eeecCChhHHHHHHHHHh
Q psy4160 121 NWALEDKQEMIDIVETVY 138 (160)
Q Consensus 121 n~~~~~kqe~iDiie~iy 138 (160)
.++ .+|+++.+.|+.+-
T Consensus 106 vG~-~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 106 AKI-QDWSSYLAQIGAML 122 (137)
T ss_dssp ESC-CCHHHHHHHHHHHH
T ss_pred eCC-CCHHHHHHHHHHHh
Confidence 443 35577777776544
No 71
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.75 E-value=0.0028 Score=49.75 Aligned_cols=64 Identities=14% Similarity=0.212 Sum_probs=55.1
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNK 106 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnk 106 (160)
.+||-|.-+|-++|.+|..+|.+++++.+.-..++.||+++-|++.+-|.+...+|++||-+++
T Consensus 28 ~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~ 91 (287)
T 3qou_A 28 PVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQ 91 (287)
T ss_dssp CEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEEEEEETTE
T ss_pred eEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeEEEEECCE
Confidence 3589999999999999999999999988776778899999999999999997766876664443
No 72
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.72 E-value=0.0026 Score=46.05 Aligned_cols=88 Identities=23% Similarity=0.425 Sum_probs=65.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..||-|..+|-+.|.+|...|.+++++.++ ..++.||+++-|++.+-|.+.--+|++||-+++-+. ++.+
T Consensus 34 ~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~---------~~~G 103 (153)
T 2wz9_A 34 LLVVHFWAPWAPQCAQMNEVMAELAKELPQ-VSFVKLEAEGVPEVSEKYEISSVPTFLFFKNSQKID---------RLDG 103 (153)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEE---------EEES
T ss_pred eEEEEEECCCCHhHHHHHHHHHHHHHHcCC-eEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEEE---------EEeC
Confidence 458999999999999999999999998755 567889999999999999997766765554333321 2223
Q ss_pred ecCChhHHHHHHHHHhhccc
Q psy4160 123 ALEDKQEMIDIVETVYRGAR 142 (160)
Q Consensus 123 ~~~~kqe~iDiie~iyrga~ 142 (160)
. +.+++.+.|+..-..+.
T Consensus 104 ~--~~~~l~~~i~~~l~~~~ 121 (153)
T 2wz9_A 104 A--HAPELTKKVQRHASSGS 121 (153)
T ss_dssp S--CHHHHHHHHHHHSCTTS
T ss_pred C--CHHHHHHHHHHHhcccc
Confidence 1 34678888887765543
No 73
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.70 E-value=0.003 Score=45.22 Aligned_cols=88 Identities=14% Similarity=0.014 Sum_probs=59.1
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
.+||-|+.+|-+.|.+|..+|.++|.+..+ ..++-||+++.+ +-|.+.--+|++||-+++-+.-=.|.-. +..
T Consensus 32 ~vvv~f~a~wC~~C~~~~p~l~~la~~~~~-v~~~~vd~~~~~---~~~~i~~~Pt~~~~~~G~~v~~~~G~~~---~~~ 104 (135)
T 2dbc_A 32 WVVIHLYRSSVPMCLVVNQHLSVLARKFPE-TKFVKAIVNSCI---EHYHDNCLPTIFVYKNGQIEGKFIGIIE---CGG 104 (135)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHCSS-EEEEEECCSSSC---SSCCSSCCSEEEEESSSSCSEEEESTTT---TTC
T ss_pred EEEEEEECCCChHHHHHHHHHHHHHHHCCC-cEEEEEEhhcCc---ccCCCCCCCEEEEEECCEEEEEEEeEEe---eCC
Confidence 368999999999999999999999997654 567889998876 6677876677766644443322223210 000
Q ss_pred ecCChhHHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVETV 137 (160)
Q Consensus 123 ~~~~kqe~iDiie~i 137 (160)
.=-+.+++...++..
T Consensus 105 ~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 105 INLKLEELEWKLSEV 119 (135)
T ss_dssp TTCCHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHc
Confidence 001567777777653
No 74
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=96.69 E-value=0.0019 Score=46.01 Aligned_cols=85 Identities=19% Similarity=0.365 Sum_probs=61.0
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeee--eCceeEEecCCCCCcee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFF--RNKHIMIDLGTGNNNKI 120 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFf--rnkHm~vD~GTgnnnKi 120 (160)
.+||-|+.+|-+.|.+|...|.+++++. + ..++.||+++-+++.+-|.+.--+|++||. +++-..+. ++
T Consensus 42 ~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~-------~~ 112 (133)
T 3cxg_A 42 SIVIKFGAVWCKPCNKIKEYFKNQLNYY-Y-VTLVDIDVDIHPKLNDQHNIKALPTFEFYFNLNNEWVLVH-------TV 112 (133)
T ss_dssp EEEEEEECTTCHHHHHTHHHHHGGGGTE-E-CEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTEEEEEE-------EE
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHhc-C-EEEEEEeccchHHHHHhcCCCCCCEEEEEEecCCCeEEEE-------EE
Confidence 3589999999999999999998887754 2 567789999999999889986656654553 34312222 22
Q ss_pred eeecCChhHHHHHHHHHh
Q psy4160 121 NWALEDKQEMIDIVETVY 138 (160)
Q Consensus 121 n~~~~~kqe~iDiie~iy 138 (160)
.+. +.++|...|+.+-
T Consensus 113 ~G~--~~~~l~~~l~~~l 128 (133)
T 3cxg_A 113 EGA--NQNDIEKAFQKYC 128 (133)
T ss_dssp ESC--CHHHHHHHHHHHS
T ss_pred cCC--CHHHHHHHHHHHH
Confidence 332 4678888887654
No 75
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.54 E-value=0.0027 Score=43.30 Aligned_cols=83 Identities=18% Similarity=0.260 Sum_probs=60.9
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINW 122 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~ 122 (160)
..++-|+.+|-|.|.++...|.+++++.++ ..++.||+++-++..+-|.+.--+|++||-+++.+. ++.+
T Consensus 21 ~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~v~---------~~~G 90 (110)
T 2l6c_A 21 DAIVFFHKNLCPHCKNMEKVLDKFGARAPQ-VAISSVDSEARPELMKELGFERVPTLVFIRDGKVAK---------VFSG 90 (110)
T ss_dssp EEEEEEECSSCSTHHHHHHHHHHHHTTCTT-SCEEEEEGGGCHHHHHHTTCCSSCEEEEEESSSEEE---------EEES
T ss_pred CEEEEEECCCCHhHHHHHHHHHHHHHHCCC-cEEEEEcCcCCHHHHHHcCCcccCEEEEEECCEEEE---------EEcC
Confidence 358899999999999999999999887654 467889999999999999997666766663343321 2333
Q ss_pred ecCChhHHHHHHHH
Q psy4160 123 ALEDKQEMIDIVET 136 (160)
Q Consensus 123 ~~~~kqe~iDiie~ 136 (160)
. .++++|...++.
T Consensus 91 ~-~~~~~l~~~~~~ 103 (110)
T 2l6c_A 91 I-MNPRELQALYAS 103 (110)
T ss_dssp C-CCHHHHHHHHHT
T ss_pred C-CCHHHHHHHHHH
Confidence 2 245777776664
No 76
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=96.52 E-value=0.0033 Score=47.37 Aligned_cols=84 Identities=19% Similarity=0.266 Sum_probs=64.8
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc---eEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCce
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF---AVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNK 119 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf---avIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnK 119 (160)
..++-|+.+|-+.|.+|-..|.++|++.+.- ..++.||.++-++..+-|.+..-+|++||-+++.+ ++ .|.
T Consensus 149 ~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~--~~-~g~--- 222 (241)
T 3idv_A 149 IILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRPY--DY-NGP--- 222 (241)
T ss_dssp EEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE--EC-CSC---
T ss_pred eEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeEE--Ee-cCC---
Confidence 3588999999999999999999999987653 77788999999999999999776687776555543 33 232
Q ss_pred eeeecCChhHHHHHHHHH
Q psy4160 120 INWALEDKQEMIDIVETV 137 (160)
Q Consensus 120 in~~~~~kqe~iDiie~i 137 (160)
.+.+++++.|+..
T Consensus 223 -----~~~~~l~~~l~~~ 235 (241)
T 3idv_A 223 -----REKYGIVDYMIEQ 235 (241)
T ss_dssp -----CSHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHhh
Confidence 3567777777654
No 77
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.47 E-value=0.0079 Score=40.66 Aligned_cols=83 Identities=14% Similarity=0.121 Sum_probs=55.7
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhc-----ceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKN-----FAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNN 117 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvkn-----favIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnn 117 (160)
.++|-|+.+|-+.|.++...|.+++++.+. -..++-||+++-+ ..+ .+..-+|+++|-+++.+.+.
T Consensus 27 ~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~~Pt~~~~~~~~~~~~~------ 97 (121)
T 2djj_A 27 DVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQGFPTIKLYPAGAKGQPV------ 97 (121)
T ss_dssp CEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSSSSEEEEECSSCTTSCC------
T ss_pred CEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCcCCeEEEEeCcCCCCce------
Confidence 458999999999999999999999998875 5677889988765 333 56555676555333222111
Q ss_pred ceeeeecCChhHHHHHHHH
Q psy4160 118 NKINWALEDKQEMIDIVET 136 (160)
Q Consensus 118 nKin~~~~~kqe~iDiie~ 136 (160)
++.+ ..+.++|.+.|+.
T Consensus 98 -~~~G-~~~~~~l~~~i~~ 114 (121)
T 2djj_A 98 -TYSG-SRTVEDLIKFIAE 114 (121)
T ss_dssp -CCCC-CSCHHHHHHHHHH
T ss_pred -EecC-CCCHHHHHHHHHh
Confidence 2222 2356777777764
No 78
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=96.43 E-value=0.0013 Score=48.84 Aligned_cols=98 Identities=7% Similarity=0.072 Sum_probs=64.3
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCcccc-cccccccc--ccceeeee-eeCceeEEecCCCCCc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPD-FNKMYELY--DPCTCMFF-FRNKHIMIDLGTGNNN 118 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpd-fn~myeL~--dP~tvmFF-frnkHm~vD~GTgnnn 118 (160)
.+||-|+-+|=|+|.++..+|.++++..+.-..++.||+++-++ ....|.+. --+|++|| -+++-+.-=.|.-...
T Consensus 48 ~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~ 127 (164)
T 1sen_A 48 PLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINENGNP 127 (164)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCTTSCT
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEEEEeCCCCcc
Confidence 34899999999999999999999876543324566788887776 67777762 24564344 2333332223433333
Q ss_pred eeeeecCChhHHHHHHHHHhhc
Q psy4160 119 KINWALEDKQEMIDIVETVYRG 140 (160)
Q Consensus 119 Kin~~~~~kqe~iDiie~iyrg 140 (160)
...+...+.++|++.|+.+...
T Consensus 128 ~~~~~~~~~~~l~~~l~~~l~~ 149 (164)
T 1sen_A 128 SYKYFYVSAEQVVQGMKEAQER 149 (164)
T ss_dssp TSTTCCCSHHHHHHHHHHHHHH
T ss_pred chhcccCCHHHHHHHHHHHHHh
Confidence 3344467889999999887654
No 79
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=96.43 E-value=0.0038 Score=43.99 Aligned_cols=83 Identities=17% Similarity=0.296 Sum_probs=56.9
Q ss_pred hhhhhccCCCCh--------------hhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCcee
Q psy4160 43 EDVIRFGHDWDP--------------TCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 43 ~~viRFGrd~dp--------------~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm 108 (160)
.++|-|+.+|-+ .|.+|...+.+++++.++-..++.||+++-++..+-|.+.--+|++|| ++..+
T Consensus 23 ~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~~ 101 (123)
T 1oaz_A 23 AILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF-KNGEV 101 (123)
T ss_dssp EEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTGGGGTCCBSSEEEEE-ESSSE
T ss_pred eEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEE-ECCEE
Confidence 358999999999 999999999999988765577889999999999999999766676666 54332
Q ss_pred EEecCCCCCceeeeecCChhHHHHHHH
Q psy4160 109 MIDLGTGNNNKINWALEDKQEMIDIVE 135 (160)
Q Consensus 109 ~vD~GTgnnnKin~~~~~kqe~iDiie 135 (160)
.- ++.+. .++++|.+.|+
T Consensus 102 ~~--------~~~G~-~~~~~l~~~l~ 119 (123)
T 1oaz_A 102 AA--------TKVGA-LSKGQLKEFLD 119 (123)
T ss_dssp EE--------EEESC-CCHHHHHHHHT
T ss_pred EE--------EEeCC-CCHHHHHHHHH
Confidence 21 22332 24567776665
No 80
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.34 E-value=0.0006 Score=44.37 Aligned_cols=60 Identities=15% Similarity=0.324 Sum_probs=50.9
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFF 102 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFF 102 (160)
..+|-|+.+|-|.|.++...|.+++++.+.-..++.+|+++-+++.+.|.+.--+|+++|
T Consensus 21 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 2yj7_A 21 PVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLF 80 (106)
Confidence 458999999999999999999999998775577788999999999999998665666555
No 81
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=96.27 E-value=0.0064 Score=44.26 Aligned_cols=93 Identities=17% Similarity=0.159 Sum_probs=58.3
Q ss_pred hhhhccCCCChhhhhhHHHH---HHHHHhhhcceEEEEEeCCccccc--------------------------ccccccc
Q psy4160 44 DVIRFGHDWDPTCMKMDEVL---YSIAEKVKNFAVIYLVDITKVPDF--------------------------NKMYELY 94 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL---~kia~kvknfavIYlvDi~~Vpdf--------------------------n~myeL~ 94 (160)
++|-|+-.|=++|.+|...+ ..+++..++-.+++-||+++-++. .+.|.+.
T Consensus 50 vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 129 (172)
T 3f9u_A 50 VMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYLQRVKFGAN 129 (172)
T ss_dssp EEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHHHHHHHSCC
T ss_pred EEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhHHHHHHcCCC
Confidence 48999999999999983333 444444443345567788765533 3445554
Q ss_pred ccceeeeeeeCceeEEecCCCCC-ceeeeecCChhHHHHHHHHHhhccccCC
Q psy4160 95 DPCTCMFFFRNKHIMIDLGTGNN-NKINWALEDKQEMIDIVETVYRGARKGR 145 (160)
Q Consensus 95 dP~tvmFFfrnkHm~vD~GTgnn-nKin~~~~~kqe~iDiie~iyrga~kGk 145 (160)
--+|++||=++ |.- .+..+...+.++|++.++.+-+..+|+|
T Consensus 130 ~~Pt~~lid~~---------G~~~~~~~G~~~~~~~l~~~l~~~l~~~~~~~ 172 (172)
T 3f9u_A 130 AQPFYVLIDNE---------GNPLNKSYAYDEDISKYINFLQTGLENYRKEK 172 (172)
T ss_dssp CSSEEEEECTT---------SCBSSCCBCSCCCHHHHHHHHHHHHHHHHHTC
T ss_pred CcceEEEECCC---------CCEEeeccCCCCCHHHHHHHHHHHHHHhhccC
Confidence 44454343121 211 3445666668999999999887777665
No 82
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=96.12 E-value=0.012 Score=40.08 Aligned_cols=63 Identities=19% Similarity=0.316 Sum_probs=46.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCcc------ccccccccccccceeeeeeeCcee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKV------PDFNKMYELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~V------pdfn~myeL~dP~tvmFFfrnkHm 108 (160)
..++-|+.+|-|.|.++-..|.+++++.+ ..++.+|++.- +++.+-|.+.--+|+++| ++..+
T Consensus 31 ~~~v~f~a~wC~~C~~~~p~l~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~-~~G~~ 99 (118)
T 1zma_A 31 TATFFIGRKTCPYCRKFAGTLSGVVAETK--AHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHI-TDGQI 99 (118)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHC--CCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEE-ETTEE
T ss_pred eEEEEEECCCCccHHHHHHHHHHHHHhcC--CeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEE-ECCEE
Confidence 45899999999999999999999988654 24566766543 466677888766776555 54433
No 83
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=96.10 E-value=0.0071 Score=45.53 Aligned_cols=87 Identities=16% Similarity=0.254 Sum_probs=64.9
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc---eEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCce
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF---AVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNK 119 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf---avIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnK 119 (160)
.++|-|..+|-+.|.++...|.+++++.+.- ..++.||.++-+++.+-|.+.--+|+++|-+++.+ ++ +|
T Consensus 34 ~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~--~~-~g---- 106 (241)
T 3idv_A 34 TVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIKILKKGQAV--DY-EG---- 106 (241)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE--EC-CS----
T ss_pred eEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEEEEEcCCCcc--cc-cC----
Confidence 3589999999999999999999999988765 77889999999999999999765676666444433 32 22
Q ss_pred eeeecCChhHHHHHHHHHhhc
Q psy4160 120 INWALEDKQEMIDIVETVYRG 140 (160)
Q Consensus 120 in~~~~~kqe~iDiie~iyrg 140 (160)
..+.+++...++..-..
T Consensus 107 ----~~~~~~l~~~i~~~~~~ 123 (241)
T 3idv_A 107 ----SRTQEEIVAKVREVSQP 123 (241)
T ss_dssp ----CSCHHHHHHHHHHHHST
T ss_pred ----cccHHHHHHHHhhccCc
Confidence 12446666666655443
No 84
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=96.07 E-value=0.0069 Score=46.39 Aligned_cols=86 Identities=9% Similarity=0.178 Sum_probs=68.8
Q ss_pred hhhhhccCCC--ChhhhhhHHHHHHHHHhhhcc-eEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCce
Q psy4160 43 EDVIRFGHDW--DPTCMKMDEVLYSIAEKVKNF-AVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNK 119 (160)
Q Consensus 43 ~~viRFGrd~--dp~Cm~mDevL~kia~kvknf-avIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnK 119 (160)
-+|+-|+-+| -++|..|.=+|..+|++...- +.++-||+++-|+.-.-|.+..=+|++||=+++-+ .+
T Consensus 36 ~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTlilFk~G~~v---------~~ 106 (140)
T 2qgv_A 36 DGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLVFTGGNYR---------GV 106 (140)
T ss_dssp SEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEEEEETTEEE---------EE
T ss_pred CEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEEEEECCEEE---------EE
Confidence 3577899887 789999999999999987655 88999999999999999999877798787656543 24
Q ss_pred eeeecCChhHHHHHHHHHh
Q psy4160 120 INWALEDKQEMIDIVETVY 138 (160)
Q Consensus 120 in~~~~~kqe~iDiie~iy 138 (160)
+.++ .+|+++.+.|+.+-
T Consensus 107 ~~G~-~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 107 LNGI-HPWAELINLMRGLV 124 (140)
T ss_dssp EESC-CCHHHHHHHHHHHH
T ss_pred EecC-CCHHHHHHHHHHHh
Confidence 4444 46678888887654
No 85
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.00 E-value=0.029 Score=42.08 Aligned_cols=83 Identities=11% Similarity=0.107 Sum_probs=61.1
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhh----cceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCcee
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVK----NFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKI 120 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvk----nfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKi 120 (160)
++-|..+|-+.|.++-..|.+++.+.+ .-..++.||+++-++..+-|.+.--+|+++| ++..... ++
T Consensus 138 ~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~~~~--------~~ 208 (226)
T 1a8l_A 138 ILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQ-VNGEDRV--------EF 208 (226)
T ss_dssp EEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEE-ETTEEEE--------EE
T ss_pred EEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEE-eCCceeE--------EE
Confidence 789999999999999999999999877 3567889999999999888999665665444 5433221 22
Q ss_pred eeecCChhHHHHHHHHH
Q psy4160 121 NWALEDKQEMIDIVETV 137 (160)
Q Consensus 121 n~~~~~kqe~iDiie~i 137 (160)
.+. .+.++|...|+..
T Consensus 209 ~G~-~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 209 EGA-YPEKMFLEKLLSA 224 (226)
T ss_dssp ESC-CCHHHHHHHHHHH
T ss_pred cCC-CCHHHHHHHHHHh
Confidence 222 3446777777654
No 86
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=95.98 E-value=0.0051 Score=42.95 Aligned_cols=62 Identities=16% Similarity=0.272 Sum_probs=50.6
Q ss_pred hhhhhccCC-------CChhhhhhHHHHHHHHHhhhcceEEEEEeC-------CccccccccccccccceeeeeeeC
Q psy4160 43 EDVIRFGHD-------WDPTCMKMDEVLYSIAEKVKNFAVIYLVDI-------TKVPDFNKMYELYDPCTCMFFFRN 105 (160)
Q Consensus 43 ~~viRFGrd-------~dp~Cm~mDevL~kia~kvknfavIYlvDi-------~~Vpdfn~myeL~dP~tvmFFfrn 105 (160)
.++|-|+-+ |-|+|.++...|.+++++.+.-..++.||+ ++-+++.+-|.+.--+|++|| ++
T Consensus 26 ~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~-~~ 101 (123)
T 1wou_A 26 TIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKY-GT 101 (123)
T ss_dssp EEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEET-TS
T ss_pred EEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEE-cC
Confidence 347889999 999999999999999988765577888999 788888888998766676444 44
No 87
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=95.90 E-value=0.0053 Score=43.36 Aligned_cols=84 Identities=11% Similarity=0.207 Sum_probs=57.4
Q ss_pred hhhhhccCCCChhhhhhHHHH---HHHHHhhhcceEEEEEeC----Cccccccccccccccceeeeee-eCceeE-EecC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVL---YSIAEKVKNFAVIYLVDI----TKVPDFNKMYELYDPCTCMFFF-RNKHIM-IDLG 113 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL---~kia~kvknfavIYlvDi----~~Vpdfn~myeL~dP~tvmFFf-rnkHm~-vD~G 113 (160)
.++|-|+.+|-+.|.+|...| .+++++.++ ..++.||+ ++.+++.+-|.+.--+|+ +|| ++..+. .
T Consensus 33 ~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~-~~~d~~G~~v~~--- 107 (134)
T 2fwh_A 33 PVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLNVLGLPTI-LFFDGQGQEHPQ--- 107 (134)
T ss_dssp CEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTTCCSSSEE-EEECTTSCBCGG---
T ss_pred cEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcCCCCCCEE-EEECCCCCEeee---
Confidence 358999999999999999888 888888887 66788998 556777788888655565 444 221110 0
Q ss_pred CCCCceeeeecCChhHHHHHHHH
Q psy4160 114 TGNNNKINWALEDKQEMIDIVET 136 (160)
Q Consensus 114 TgnnnKin~~~~~kqe~iDiie~ 136 (160)
.++.+. .++++|.+.++.
T Consensus 108 ----~~~~G~-~~~~~l~~~l~~ 125 (134)
T 2fwh_A 108 ----ARVTGF-MDAETFSAHLRD 125 (134)
T ss_dssp ----GCBCSC-CCHHHHHHHHHH
T ss_pred ----eeeeec-cCHHHHHHHHHh
Confidence 123332 346778777764
No 88
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=95.88 E-value=0.0078 Score=49.11 Aligned_cols=62 Identities=10% Similarity=0.091 Sum_probs=50.8
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCce
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKH 107 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkH 107 (160)
.+||.|..+|-++|.+|..+|.++|.+..+ ..++-||+++ +++.+-|.+.--+|++|| ++-.
T Consensus 135 ~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~-~~l~~~~~I~~~PTll~~-~~G~ 196 (245)
T 1a0r_P 135 TIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN-TGAGDRFSSDVLPTLLVY-KGGE 196 (245)
T ss_dssp EEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH-HCCTTSSCTTTCSEEEEE-ETTE
T ss_pred EEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc-HHHHHHCCCCCCCEEEEE-ECCE
Confidence 458999999999999999999999998766 6778899888 878888888766676555 4443
No 89
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=95.88 E-value=0.0072 Score=45.71 Aligned_cols=96 Identities=13% Similarity=0.023 Sum_probs=58.5
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHH---hhh-cceEEEEEeCC-ccccccccccccccceeeeee-eCceeEEecCCCCC
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAE---KVK-NFAVIYLVDIT-KVPDFNKMYELYDPCTCMFFF-RNKHIMIDLGTGNN 117 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~---kvk-nfavIYlvDi~-~Vpdfn~myeL~dP~tvmFFf-rnkHm~vD~GTgnn 117 (160)
++|-|+-+|=++|..|..++.+.++ ..+ +| +.|+++ +-++-...|++.-.+|++||= +++-+.-=.|...+
T Consensus 47 VlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~f---v~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~ 123 (151)
T 3ph9_A 47 LMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKF---IMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRADIAGRYSN 123 (151)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTC---EEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCTTCCCSCTT
T ss_pred EEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCe---EEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEEEEeCCcCC
Confidence 4899999999999999999987543 222 44 445553 334445567776677765553 23322211454344
Q ss_pred ceeeeecCChhHHHHHHHHHhhccc
Q psy4160 118 NKINWALEDKQEMIDIVETVYRGAR 142 (160)
Q Consensus 118 nKin~~~~~kqe~iDiie~iyrga~ 142 (160)
....|.-.+..++++-++.+++-..
T Consensus 124 ~~~~~~~~~~~~ll~~~~~al~~~~ 148 (151)
T 3ph9_A 124 RLYTYEPRDLPLLIENMKKALRLIQ 148 (151)
T ss_dssp STTCCCGGGHHHHHHHHHHHHSCCC
T ss_pred cccccchhhHHHHHHHHHHHHHHHh
Confidence 4445555666777777776665443
No 90
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=95.82 E-value=0.016 Score=44.84 Aligned_cols=61 Identities=18% Similarity=0.273 Sum_probs=52.3
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhc---ceEEEEEeC--Cccccccccccccccceeeeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKN---FAVIYLVDI--TKVPDFNKMYELYDPCTCMFFF 103 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvkn---favIYlvDi--~~Vpdfn~myeL~dP~tvmFFf 103 (160)
.++|-|.-+|-+.|.++...+.+++++.+. -..++.||+ ++-++..+-|.+.--+|++||-
T Consensus 32 ~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~ 97 (244)
T 3q6o_A 32 AWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFX 97 (244)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEEC
T ss_pred eEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEe
Confidence 458999999999999999999999999886 678889998 6788899999997767765554
No 91
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=95.75 E-value=0.027 Score=38.55 Aligned_cols=86 Identities=16% Similarity=0.228 Sum_probs=57.8
Q ss_pred hhhhhccCCCChhhhhhHHHH---HHHHHhhhcceEEEEEeCC--ccccccccccccccceeeeeeeCceeEEecCCCCC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVL---YSIAEKVKNFAVIYLVDIT--KVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNN 117 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL---~kia~kvknfavIYlvDi~--~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnn 117 (160)
.++|-|+.+|-|.|.+|...| ..+++..+.-..++.+|.+ +-+++.+.|.+.--+|+++|=++..+.
T Consensus 29 ~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~-------- 100 (130)
T 2kuc_A 29 LLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVV-------- 100 (130)
T ss_dssp CEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEE--------
T ss_pred eEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEE--------
Confidence 348999999999999999988 6677666555667888987 577888888886655653431222221
Q ss_pred ceeeeecCChhHHHHHHHHH
Q psy4160 118 NKINWALEDKQEMIDIVETV 137 (160)
Q Consensus 118 nKin~~~~~kqe~iDiie~i 137 (160)
.++.+ ..+.++|...|+..
T Consensus 101 ~~~~G-~~~~~~l~~~l~~~ 119 (130)
T 2kuc_A 101 YRLVG-AEDAPELLKKVKLG 119 (130)
T ss_dssp EEEES-CCCHHHHHHHHHHH
T ss_pred EEecC-CCCHHHHHHHHHHH
Confidence 11222 22567888887765
No 92
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=95.38 E-value=0.099 Score=36.74 Aligned_cols=89 Identities=20% Similarity=0.186 Sum_probs=61.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCCc-------------------------ccccccccccccc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITK-------------------------VPDFNKMYELYDP 96 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~~-------------------------Vpdfn~myeL~dP 96 (160)
.+||-|+-.|-|.|.++-..|.+++++.+.- ..++.|++++ -..+.+.|.+.--
T Consensus 31 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~ 110 (152)
T 2lrn_A 31 YVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIVGF 110 (152)
T ss_dssp EEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCCSS
T ss_pred EEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCCcC
Confidence 3588999999999999999999999887653 6677778775 2344455666433
Q ss_pred ceeeeee-eCceeEEecCCCCCceeeeecCChhHHHHHHHHHhhccccC
Q psy4160 97 CTCMFFF-RNKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKG 144 (160)
Q Consensus 97 ~tvmFFf-rnkHm~vD~GTgnnnKin~~~~~kqe~iDiie~iyrga~kG 144 (160)
+|+ |++ ++ -++.+..-+.+++.+.|+.+-.++..+
T Consensus 111 P~~-~lid~~------------G~i~~~~~~~~~l~~~l~~l~~~~~~~ 146 (152)
T 2lrn_A 111 PHI-ILVDPE------------GKIVAKELRGDDLYNTVEKFVNGAKEG 146 (152)
T ss_dssp CEE-EEECTT------------SEEEEECCCTTHHHHHHHHHHTSSSSC
T ss_pred CeE-EEECCC------------CeEEEeeCCHHHHHHHHHHHHhhcccc
Confidence 343 444 22 244444346688999999887776654
No 93
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=95.28 E-value=0.031 Score=45.68 Aligned_cols=63 Identities=19% Similarity=0.307 Sum_probs=53.7
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCC--ccccccccccccccceeeeeeeCc
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT--KVPDFNKMYELYDPCTCMFFFRNK 106 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~--~Vpdfn~myeL~dP~tvmFFfrnk 106 (160)
++|-|.-+|-+.|.++-..|.++|++++.-..+..||++ +-+++.+-|.+.--+|+++|-+++
T Consensus 38 vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g~ 102 (298)
T 3ed3_A 38 SLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPK 102 (298)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECCC
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEEECCc
Confidence 589999999999999999999999998876778888887 678899999998777876665554
No 94
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=95.21 E-value=0.029 Score=44.14 Aligned_cols=62 Identities=13% Similarity=0.303 Sum_probs=53.4
Q ss_pred hhhhccC-------CCChhhhhhHHHHHHHHHhhh-----cceEEEEEeCCccccccccccccccceeeeeeeC
Q psy4160 44 DVIRFGH-------DWDPTCMKMDEVLYSIAEKVK-----NFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRN 105 (160)
Q Consensus 44 ~viRFGr-------d~dp~Cm~mDevL~kia~kvk-----nfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrn 105 (160)
+|+-|.- .|=.+|.+|.-++.++|++.+ .-..++-||+++-|+.-+.|.+..=+|+|+|-.+
T Consensus 40 vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~~~~I~siPtl~~F~~g 113 (178)
T 3ga4_A 40 NILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVKDLKLQNVPHLVVYPPA 113 (178)
T ss_dssp EEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHHHTTCCSSCEEEEECCC
T ss_pred EEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHHHcCCCCCCEEEEEcCC
Confidence 4777876 489999999999999999876 5578899999999999999999988898777544
No 95
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=94.19 E-value=0.0033 Score=43.37 Aligned_cols=94 Identities=12% Similarity=0.216 Sum_probs=62.0
Q ss_pred hhhhhccCCCChhhhhhHHHH---HHHHHhhhcceEEEEEeC--Cccccccccccccccceeeeee-eCcee-EEecCCC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVL---YSIAEKVKNFAVIYLVDI--TKVPDFNKMYELYDPCTCMFFF-RNKHI-MIDLGTG 115 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL---~kia~kvknfavIYlvDi--~~Vpdfn~myeL~dP~tvmFFf-rnkHm-~vD~GTg 115 (160)
.++|-|+.+|-+.|.+|...| .++++..+.-..++.||+ ++-+++.+.|.+.--+|++||= ++..+ .+.
T Consensus 21 ~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~---- 96 (130)
T 2lst_A 21 MVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVG---- 96 (130)
Confidence 358999999999999999988 788877666456677888 4668888888886656654441 22111 011
Q ss_pred CCceeeeecCChhHHHHHHHHHhhccccC
Q psy4160 116 NNNKINWALEDKQEMIDIVETVYRGARKG 144 (160)
Q Consensus 116 nnnKin~~~~~kqe~iDiie~iyrga~kG 144 (160)
++.+. .+.++|...|+.+-.+...|
T Consensus 97 ---~~~G~-~~~~~l~~~l~~~~~~~~~~ 121 (130)
T 2lst_A 97 ---RLFGS-RPRAEFLKELRQVCVKGGAC 121 (130)
Confidence 12222 24577888887766555444
No 96
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=94.89 E-value=0.043 Score=45.58 Aligned_cols=70 Identities=17% Similarity=0.240 Sum_probs=55.6
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhh------cceEEEEEeCCccccccccccccccceeeeeeeCceeEEec
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVK------NFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDL 112 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvk------nfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~ 112 (160)
.++|-|.-+|-+.|.+|-.++.++|.+++ .-..+..||.++-++..+-|.+.--+|++||-+++.+..++
T Consensus 24 ~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~f~~G~~~~~~~ 99 (382)
T 2r2j_A 24 VALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREY 99 (382)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEESEEEEEETTEEEEEEC
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCCEEEEEeCCcEeeeee
Confidence 35899999999999999999999999884 34788999999999999999997767776554444333333
No 97
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=94.86 E-value=0.072 Score=39.91 Aligned_cols=85 Identities=14% Similarity=0.190 Sum_probs=60.6
Q ss_pred hhhccCC-CChhhhhhHHHHHHHHHhhhcceEEEEEeCCc--cccccccccccccceeeeeeeCceeEEecCCCCCceee
Q psy4160 45 VIRFGHD-WDPTCMKMDEVLYSIAEKVKNFAVIYLVDITK--VPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKIN 121 (160)
Q Consensus 45 viRFGrd-~dp~Cm~mDevL~kia~kvknfavIYlvDi~~--Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin 121 (160)
++-|.-+ |-+.|.++..+|.++|+. +.-..+..||.++ -|+..+-|.+..-+|+++|-.++.... +..
T Consensus 26 lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~--------~~~ 96 (226)
T 1a8l_A 26 LIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGV--------RYF 96 (226)
T ss_dssp EEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSE--------EEE
T ss_pred EEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeE--------EEe
Confidence 5779999 999999999999999965 4456778999998 899888899877667666533332212 222
Q ss_pred eecCChhHHHHHHHHHhh
Q psy4160 122 WALEDKQEMIDIVETVYR 139 (160)
Q Consensus 122 ~~~~~kqe~iDiie~iyr 139 (160)
+ ..+.+++.+.++.+..
T Consensus 97 G-~~~~~~l~~~l~~~l~ 113 (226)
T 1a8l_A 97 G-LPAGHEFAAFLEDIVD 113 (226)
T ss_dssp S-CCCTTHHHHHHHHHHH
T ss_pred c-cCcHHHHHHHHHHHHh
Confidence 2 2345677777776654
No 98
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=94.71 E-value=0.033 Score=47.00 Aligned_cols=68 Identities=16% Similarity=0.137 Sum_probs=56.5
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEe
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMID 111 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD 111 (160)
..++-|..+|-+.|.+|..++.++|.+++.-..++.||.++-++..+-|.+.--+|++|| ++......
T Consensus 23 ~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~-~~g~~~~~ 90 (481)
T 3f8u_A 23 LMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIF-RDGEEAGA 90 (481)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEEEE-ETTEEEEE
T ss_pred eEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEEEE-eCCceeee
Confidence 458999999999999999999999999887788899999999999999999665587666 55433333
No 99
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=94.54 E-value=0.12 Score=37.34 Aligned_cols=86 Identities=15% Similarity=0.235 Sum_probs=54.8
Q ss_pred hhhhc-cCCCChhhhhhHHHH---HHHHHhhhcceEEEEEeCCccc-----------cccccccccccceeeeee-eCce
Q psy4160 44 DVIRF-GHDWDPTCMKMDEVL---YSIAEKVKNFAVIYLVDITKVP-----------DFNKMYELYDPCTCMFFF-RNKH 107 (160)
Q Consensus 44 ~viRF-Grd~dp~Cm~mDevL---~kia~kvknfavIYlvDi~~Vp-----------dfn~myeL~dP~tvmFFf-rnkH 107 (160)
++|-| |-+|-|.|.++...| .++++..+.-..++-||+++-+ .+.+.|.+.--+|+ +|+ ++-.
T Consensus 50 vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~-~~~d~~G~ 128 (154)
T 2ju5_A 50 IGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPEL-VFIDAEGK 128 (154)
T ss_dssp EEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEE-EEECTTCC
T ss_pred EEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEE-EEEcCCCC
Confidence 47889 599999999999888 6776655333456778988765 56677777655564 444 3222
Q ss_pred eEEecCCCCCceeeeecCChhHHHHHHHHHh
Q psy4160 108 IMIDLGTGNNNKINWALEDKQEMIDIVETVY 138 (160)
Q Consensus 108 m~vD~GTgnnnKin~~~~~kqe~iDiie~iy 138 (160)
+.-..|.- -.+.++|++.|+.+-
T Consensus 129 ~~~~~G~~--------~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 129 QLARMGFE--------PGGGAAYVSKVKSAL 151 (154)
T ss_dssp EEEEECCC--------TTCHHHHHHHHHHHH
T ss_pred EEEEecCC--------CCCHHHHHHHHHHHH
Confidence 22111211 226788888887653
No 100
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=94.46 E-value=0.033 Score=43.90 Aligned_cols=63 Identities=10% Similarity=0.075 Sum_probs=49.9
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCcee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm 108 (160)
.+||-|..+|-+.|..|..+|.++|++..+ ..++-||++ -|+..+-|.+.--+|++|| ++-.+
T Consensus 122 ~vvV~F~a~wC~~C~~l~p~l~~la~~~~~-v~f~~vd~~-~~~l~~~~~i~~~PTl~~~-~~G~~ 184 (217)
T 2trc_P 122 TIVVNIYEDGVRGCDALNSSLECLAAEYPM-VKFCKIRAS-NTGAGDRFSSDVLPTLLVY-KGGEL 184 (217)
T ss_dssp EEEEEEECTTSTTHHHHHHHHHHHHTTCTT-SEEEEEEHH-HHTCSTTSCGGGCSEEEEE-ETTEE
T ss_pred EEEEEEECCCCccHHHHHHHHHHHHHHCCC-eEEEEEECC-cHHHHHHCCCCCCCEEEEE-ECCEE
Confidence 468999999999999999999999987654 566788888 7777778888766676555 55444
No 101
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=94.44 E-value=0.13 Score=36.45 Aligned_cols=88 Identities=10% Similarity=0.034 Sum_probs=62.1
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccc--cceeeeeeeCceeEEecCCCCCceee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYD--PCTCMFFFRNKHIMIDLGTGNNNKIN 121 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~d--P~tvmFFfrnkHm~vD~GTgnnnKin 121 (160)
+++-|.-.+ .+|..|-.+|.++|++.+.=+.++.||+++-|..-+.|.|.. -+|+++| ++. .|..+++.
T Consensus 26 v~v~f~a~~-~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~-~~~-------~g~~~~~~ 96 (133)
T 2djk_A 26 LAYIFAETA-EERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQ-EVA-------KNQKFPFD 96 (133)
T ss_dssp EEEEECSCS-SSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEE-CTT-------TCCBCCCC
T ss_pred EEEEEecCh-hhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEE-ecC-------cCcccCCC
Confidence 467888775 689999999999999876557889999999999999999965 5676554 431 12222222
Q ss_pred --eecCChhHHHHHHHHHhhcc
Q psy4160 122 --WALEDKQEMIDIVETVYRGA 141 (160)
Q Consensus 122 --~~~~~kqe~iDiie~iyrga 141 (160)
+++ +++.+...|+.+-.|.
T Consensus 97 ~~g~~-~~~~l~~fi~~~l~Gk 117 (133)
T 2djk_A 97 QEKEI-TFEAIKAFVDDFVAGK 117 (133)
T ss_dssp SSSCC-CHHHHHHHHHHHHHTC
T ss_pred Ccccc-CHHHHHHHHHHHHcCC
Confidence 222 4567777777766553
No 102
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=94.40 E-value=0.15 Score=34.76 Aligned_cols=43 Identities=16% Similarity=0.214 Sum_probs=36.4
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCCcccc
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITKVPD 86 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~~Vpd 86 (160)
.||-|+-.|-|.|.++-..|.+++++.+.- ..++.|++++-++
T Consensus 34 vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~ 77 (148)
T 3hcz_A 34 TILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDE 77 (148)
T ss_dssp EEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSH
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHH
Confidence 578899999999999999999999987765 6777888876665
No 103
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=94.31 E-value=0.062 Score=41.70 Aligned_cols=59 Identities=17% Similarity=0.102 Sum_probs=44.1
Q ss_pred hhhhccCCCChhhhhhHHH---HHHHHHhhhcceEEEEEeCCccccccccc--------cccccceeeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEV---LYSIAEKVKNFAVIYLVDITKVPDFNKMY--------ELYDPCTCMFF 102 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDev---L~kia~kvknfavIYlvDi~~Vpdfn~my--------eL~dP~tvmFF 102 (160)
++|-|+-+|=+.|..|... ..++++.+++-.+..-||+++-|+..+.| .+.-.+|++||
T Consensus 42 VlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l 111 (173)
T 3ira_A 42 VFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIM 111 (173)
T ss_dssp EEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEE
T ss_pred EEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeE
Confidence 4899999999999999873 24666666655566788999999987777 56544554454
No 104
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=94.19 E-value=0.048 Score=46.54 Aligned_cols=64 Identities=17% Similarity=0.171 Sum_probs=55.0
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCCccccccccccccccceeeeeeeCce
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKH 107 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkH 107 (160)
.++|-|..+|-+.|.++-.++.++|.+++.. ..+..||.++-++..+-|.+.--+|++|| ++..
T Consensus 33 ~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~g~ 97 (504)
T 2b5e_A 33 LVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKIF-KNSD 97 (504)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTC
T ss_pred eEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEEEE-eCCc
Confidence 3489999999999999999999999998876 88899999999999999999776687565 4443
No 105
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=94.16 E-value=0.014 Score=43.15 Aligned_cols=85 Identities=8% Similarity=0.180 Sum_probs=56.9
Q ss_pred hhhhhccCCC--ChhhhhhHHHHHHHHHhhhcceE--EEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCc
Q psy4160 43 EDVIRFGHDW--DPTCMKMDEVLYSIAEKVKNFAV--IYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNN 118 (160)
Q Consensus 43 ~~viRFGrd~--dp~Cm~mDevL~kia~kvknfav--IYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnn 118 (160)
.+|+-|.-+| -++|..|.-+|.+++++..+ .. ++-||+++-|+..+-|.+.-=+|++|| ++-.+ + .
T Consensus 36 ~~vv~f~~~~~~C~~C~~l~P~l~~la~~~~~-v~~~~~~Vd~d~~~~la~~~~V~~iPT~~~f-k~G~~-v-------~ 105 (142)
T 2es7_A 36 DGVILLSSDPRRTPEVSDNPVMIAELLREFPQ-FDWQVAVADLEQSEAIGDRFNVRRFPATLVF-TDGKL-R-------G 105 (142)
T ss_dssp SEEEEECCCSCC----CCHHHHHHHHHHTCTT-SCCEEEEECHHHHHHHHHTTTCCSSSEEEEE-SCC------------
T ss_pred CEEEEEECCCCCCccHHHHHHHHHHHHHHhcc-cceeEEEEECCCCHHHHHhcCCCcCCeEEEE-eCCEE-E-------E
Confidence 3577787665 68999999999999997633 55 889999999999999999765666565 55332 2 2
Q ss_pred eeeeecCChhHHHHHHHHHh
Q psy4160 119 KINWALEDKQEMIDIVETVY 138 (160)
Q Consensus 119 Kin~~~~~kqe~iDiie~iy 138 (160)
++.+. .+++++.+.|+...
T Consensus 106 ~~~G~-~~~~~l~~~i~~~l 124 (142)
T 2es7_A 106 ALSGI-HPWAELLTLMRSIV 124 (142)
T ss_dssp CEESC-CCHHHHHHHHHHHH
T ss_pred EEeCC-CCHHHHHHHHHHHh
Confidence 34443 34678888887654
No 106
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=94.10 E-value=0.29 Score=33.21 Aligned_cols=39 Identities=13% Similarity=0.111 Sum_probs=32.4
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCC
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT 82 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~ 82 (160)
.||-|+-.|-|.|.++-..|.+++++.+.-..++.|+++
T Consensus 32 ~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~ 70 (148)
T 2b5x_A 32 TLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMP 70 (148)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECC
T ss_pred EEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcC
Confidence 478999999999999999999999887654666777754
No 107
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=94.00 E-value=0.032 Score=40.54 Aligned_cols=62 Identities=15% Similarity=0.247 Sum_probs=49.9
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCcee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm 108 (160)
.|+-|+.+|=|.|.++-.+|.+++++.. ..+..|||++-|+...-|.+.-| ++++|-.++++
T Consensus 31 ~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~VP-~l~~~~dG~~v 92 (107)
T 2fgx_A 31 KLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEHLTRLYNDRVP-VLFAVNEDKEL 92 (107)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTSCS-EEEETTTTEEE
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCCCc-eEEEEECCEEE
Confidence 3778999999999999999999988643 56678999998888777777645 55667667765
No 108
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=93.96 E-value=0.047 Score=34.98 Aligned_cols=75 Identities=17% Similarity=0.268 Sum_probs=52.6
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccc----ccccccc--ccccceeeeeeeCceeEEecCCCCCc
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVP----DFNKMYE--LYDPCTCMFFFRNKHIMIDLGTGNNN 118 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vp----dfn~mye--L~dP~tvmFFfrnkHm~vD~GTgnnn 118 (160)
|+-|+.+|=|.|.++-..|.+++.+-++ ..+..+|+++-| ++.+.|. ...-+++ |.+++++- |
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~---~----- 71 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIG---G----- 71 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEE---S-----
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEE---C-----
Confidence 4559999999999999999999886555 445678887654 6777776 4444453 55676641 1
Q ss_pred eeeeecCChhHHHHHHHHHh
Q psy4160 119 KINWALEDKQEMIDIVETVY 138 (160)
Q Consensus 119 Kin~~~~~kqe~iDiie~iy 138 (160)
.+++..+++.-|
T Consensus 72 --------~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 --------YTDFAAWVKENL 83 (85)
T ss_dssp --------SHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHhc
Confidence 257777777766
No 109
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=93.81 E-value=0.22 Score=37.78 Aligned_cols=84 Identities=11% Similarity=0.058 Sum_probs=60.3
Q ss_pred cHHHHHHhhcCChhhHHhhh-----hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCcccccccccc---cc
Q psy4160 23 TLKEWARCLELNEDEIEDQC-----EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYE---LY 94 (160)
Q Consensus 23 s~~EW~~C~~L~e~~~d~rc-----~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~mye---L~ 94 (160)
...+|-.-..+.++...... .+|+-|+-+|=|+|.++--+|.+++++-++ ..++.||+++-|+...-|. +.
T Consensus 31 ~~~~~~~~~~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~-v~~~~v~~d~~~~~~~~~~~~~v~ 109 (167)
T 1z6n_A 31 RFRQKLESNGLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQPN-IELAIISKGRAEDDLRQRLALERI 109 (167)
T ss_dssp HHHHHHHHHCCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTT-EEEEEECHHHHHHHTTTTTTCSSC
T ss_pred HHHHHHHccCCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHHHHcCCC
Confidence 35667766777777554322 348899999999999999999999987655 5678899999888776665 54
Q ss_pred ccceeeeeeeCc-ee
Q psy4160 95 DPCTCMFFFRNK-HI 108 (160)
Q Consensus 95 dP~tvmFFfrnk-Hm 108 (160)
.-+|+ +||++. ++
T Consensus 110 ~iPt~-i~~~~~G~~ 123 (167)
T 1z6n_A 110 AIPLV-LVLDEEFNL 123 (167)
T ss_dssp CSSEE-EEECTTCCE
T ss_pred CcCeE-EEECCCCCE
Confidence 43454 445543 44
No 110
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=93.64 E-value=0.028 Score=39.30 Aligned_cols=52 Identities=15% Similarity=0.226 Sum_probs=41.9
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCC------ccccccccccccccceeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT------KVPDFNKMYELYDPCTCMF 101 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~------~Vpdfn~myeL~dP~tvmF 101 (160)
.|+-|+-+|-|.|.+|-.+|.+++++++ .||++ +-++..+-|.+.-.+|++|
T Consensus 15 ~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i 72 (106)
T 3kp8_A 15 GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII 72 (106)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEeCEEEE
Confidence 4889999999999999999999986554 45655 6788888999987778433
No 111
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=93.61 E-value=0.066 Score=48.22 Aligned_cols=69 Identities=12% Similarity=0.060 Sum_probs=50.7
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEec
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDL 112 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~ 112 (160)
.+++-|..+|-+.|.+|..++.++|++++.-..++.||.++-++..+-|.+.--+|++|| ++......+
T Consensus 135 ~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~g~~~~~~ 203 (780)
T 3apo_A 135 LWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIF-RSGMAAVKY 203 (780)
T ss_dssp CEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCSSCC--------CEEEEE-CTTSCCEEC
T ss_pred cEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEeCCCcHHHHHHcCCceeeeEEEE-eCCcEeeEe
Confidence 458999999999999999999999999887788999999999999999999776786555 555443333
No 112
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=93.39 E-value=0.21 Score=42.12 Aligned_cols=85 Identities=22% Similarity=0.270 Sum_probs=60.2
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhc--ceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKN--FAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKIN 121 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvkn--favIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin 121 (160)
++|-|.-+|-+.|.++-.+|.+++++.+. -.+++-+|.++- +..+-|.+.--+|++||-+++.+.+.--+|.
T Consensus 373 vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~-~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~----- 446 (481)
T 3f8u_A 373 VLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVRGFPTIYFSPANKKLNPKKYEGG----- 446 (481)
T ss_dssp EEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS-CCCTTCCCCSSSEEEEECTTCTTSCEECCSC-----
T ss_pred EEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch-hhHhhCCCcccCEEEEEeCCCeEeeeEeCCC-----
Confidence 48999999999999999999999998776 377788998765 5556677766568655544433222222222
Q ss_pred eecCChhHHHHHHHHH
Q psy4160 122 WALEDKQEMIDIVETV 137 (160)
Q Consensus 122 ~~~~~kqe~iDiie~i 137 (160)
.+.++|++.|+..
T Consensus 447 ---~~~~~l~~~l~~~ 459 (481)
T 3f8u_A 447 ---RELSDFISYLQRE 459 (481)
T ss_dssp ---CSHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHh
Confidence 3567888877764
No 113
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=93.16 E-value=0.2 Score=37.77 Aligned_cols=84 Identities=10% Similarity=0.178 Sum_probs=62.5
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeeeec
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWAL 124 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~~~ 124 (160)
++-|...|-+.|.++-.+|.+++.+.. -..++.||+++-|+..+-|.+..-+|+++ +++ + .+..+.
T Consensus 140 ~v~F~a~wC~~C~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G~-~---------~~~~G~- 205 (229)
T 2ywm_A 140 IWVFVTTSCGYCPSAAVMAWDFALAND-YITSKVIDASENQDLAEQFQVVGVPKIVI--NKG-V---------AEFVGA- 205 (229)
T ss_dssp EEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEEGGGCHHHHHHTTCCSSSEEEE--GGG-T---------EEEESC-
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHCC-CeEEEEEECCCCHHHHHHcCCcccCEEEE--CCE-E---------EEeeCC-
Confidence 567999999999999999999998764 46778999999999999999966556433 554 2 122332
Q ss_pred CChhHHHHHHHHHhhccc
Q psy4160 125 EDKQEMIDIVETVYRGAR 142 (160)
Q Consensus 125 ~~kqe~iDiie~iyrga~ 142 (160)
.+.++|...++.....++
T Consensus 206 ~~~~~l~~~l~~~~~~~~ 223 (229)
T 2ywm_A 206 QPENAFLGYIMAVYEKLK 223 (229)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhhhh
Confidence 355788888887766543
No 114
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=93.13 E-value=0.21 Score=44.98 Aligned_cols=88 Identities=11% Similarity=0.089 Sum_probs=67.4
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWA 123 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~~ 123 (160)
++|-|.-+|-++|.++-..|.++|.+.+.-..+..||+++-|+..+.|.+..-+|+++| ++..+ -.++.+.
T Consensus 678 v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~g~~--------~~~~~G~ 748 (780)
T 3apo_A 678 WVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLY-QYERA--------KKSIWEE 748 (780)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE-EEETT--------TTEEEEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCHHHHHhcCCCcCCEEEEE-cCCCc--------cccccCc
Confidence 48999999999999999999999998865577889999999999999999776676565 43211 1234443
Q ss_pred ---cCChhHHHHHHHHHhhc
Q psy4160 124 ---LEDKQEMIDIVETVYRG 140 (160)
Q Consensus 124 ---~~~kqe~iDiie~iyrg 140 (160)
-.+.+++...|+..-..
T Consensus 749 ~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 749 QINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp EECCCCHHHHHHHHHHHTTC
T ss_pred ccCCcCHHHHHHHHHHHHHH
Confidence 34678899998887643
No 115
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=93.08 E-value=0.21 Score=44.75 Aligned_cols=94 Identities=15% Similarity=0.203 Sum_probs=68.0
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhc--------ceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCC
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKN--------FAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTG 115 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvkn--------favIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTg 115 (160)
+||-|.-+|=++|.+|.-++.+++++.++ -..++-||+++-|+..+-|.+.-.+|++||-+++-....-=.|
T Consensus 45 VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~~~PTlilf~~gg~~~~~~y~G 124 (470)
T 3qcp_A 45 WIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDINFVPRLFFFYPRDSCRSNEECG 124 (470)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCCSSCEEEEEEESSCCCTTSCCC
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCCccCeEEEEECCCceEEEEeeC
Confidence 58999999999999999999999998762 3678999999999999999998888877776555433332233
Q ss_pred CC--ceeeeec--CChhHHHHHHHHH
Q psy4160 116 NN--NKINWAL--EDKQEMIDIVETV 137 (160)
Q Consensus 116 nn--nKin~~~--~~kqe~iDiie~i 137 (160)
.. ..+.|.. -+++++...++.+
T Consensus 125 ~r~~e~L~fI~k~l~~~eLe~~~e~L 150 (470)
T 3qcp_A 125 TSSLEHVAFENSHLEVDELESEVRRL 150 (470)
T ss_dssp CCCEEEEECSCTTCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCHHHHHHHHHHH
Confidence 32 2243331 2456666666644
No 116
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=93.02 E-value=0.32 Score=32.64 Aligned_cols=83 Identities=14% Similarity=0.144 Sum_probs=54.5
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCc----------------------cccccccccccccceeee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITK----------------------VPDFNKMYELYDPCTCMF 101 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~----------------------Vpdfn~myeL~dP~tvmF 101 (160)
.+|-|...|-|.|.++-..|.+++++.++ ..++.|++++ -+.+.+.|.+.--+|+ +
T Consensus 27 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~-~ 104 (136)
T 1lu4_A 27 AVLWFWTPWCPFCNAEAPSLSQVAAANPA-VTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAF-V 104 (136)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEE-E
T ss_pred EEEEEECCcChhHHHHHHHHHHHHHHCCC-cEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEE-E
Confidence 58899999999999999999999998774 4556777765 4555566666544453 4
Q ss_pred ee-eCceeEEecC--CCCCceeeeecCChhHHHHHHHHH
Q psy4160 102 FF-RNKHIMIDLG--TGNNNKINWALEDKQEMIDIVETV 137 (160)
Q Consensus 102 Ff-rnkHm~vD~G--TgnnnKin~~~~~kqe~iDiie~i 137 (160)
++ ++..+. -+. +|. .+.+++.+.|+.+
T Consensus 105 lid~~G~i~-~~~~~~g~--------~~~~~l~~~l~~l 134 (136)
T 1lu4_A 105 FYRADGTST-FVNNPTAA--------MSQDELSGRVAAL 134 (136)
T ss_dssp EECTTSCEE-EECCSSSC--------CCHHHHHHHHHHC
T ss_pred EECCCCcEE-EEEcCCCc--------cCHHHHHHHHHHH
Confidence 44 344443 211 122 2357777777653
No 117
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=93.00 E-value=0.14 Score=45.62 Aligned_cols=61 Identities=15% Similarity=0.204 Sum_probs=52.7
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhc---ceEEEEEeCC--ccccccccccccccceeeeee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKN---FAVIYLVDIT--KVPDFNKMYELYDPCTCMFFF 103 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvkn---favIYlvDi~--~Vpdfn~myeL~dP~tvmFFf 103 (160)
.++|-|.-+|-++|.+|.-++.+++++.+. -..++.||++ +-++..+-|.+.--+|++||-
T Consensus 32 ~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~ 97 (519)
T 3t58_A 32 AWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQ 97 (519)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEEC
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEc
Confidence 458999999999999999999999999887 6888999994 589999999998777865554
No 118
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=92.73 E-value=0.49 Score=35.76 Aligned_cols=98 Identities=15% Similarity=0.174 Sum_probs=62.0
Q ss_pred hhhhccCCCChhhhhhHHHH---HHHHHhhhcceEEEEEeCCc--cccccccccccccceeeeeeeCceeEEecCCCCC-
Q psy4160 44 DVIRFGHDWDPTCMKMDEVL---YSIAEKVKNFAVIYLVDITK--VPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNN- 117 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL---~kia~kvknfavIYlvDi~~--Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnn- 117 (160)
.+|-|+-+|-+.|..|++.. ..+++.+++-.+..-+|+++ -..+-+.|.+.-++|+.|+ ..+ ||..
T Consensus 45 vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fl-d~~-------~G~~l 116 (153)
T 2dlx_A 45 LMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSIL-DPR-------TGQKL 116 (153)
T ss_dssp EEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEE-CTT-------TCCCC
T ss_pred EEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEE-eCC-------CCcEe
Confidence 38999999999999998766 45566664333445668765 2346677888778886444 322 2322
Q ss_pred ceeeeecCChhHHHHHHHHHhhccccCCeeEECC
Q psy4160 118 NKINWALEDKQEMIDIVETVYRGARKGRGLVVSP 151 (160)
Q Consensus 118 nKin~~~~~kqe~iDiie~iyrga~kGk~iv~sP 151 (160)
..+.+ -+.++|+..++.+-....+=.|.-.|+
T Consensus 117 ~~~~g--~~~~~fl~~L~~~l~~~~~~~~~~~~~ 148 (153)
T 2dlx_A 117 VEWHQ--LDVSSFLDQVTGFLGEHGQLDGLSSSS 148 (153)
T ss_dssp EEESS--CCHHHHHHHHHHHHHHTCSCSSCCCCC
T ss_pred eecCC--CCHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 22434 488999999988765433222444443
No 119
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=92.62 E-value=0.47 Score=32.25 Aligned_cols=84 Identities=12% Similarity=0.104 Sum_probs=56.5
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhh-hcc-eEEEEEeCCccc-------------------------cccccccccc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKV-KNF-AVIYLVDITKVP-------------------------DFNKMYELYD 95 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kv-knf-avIYlvDi~~Vp-------------------------dfn~myeL~d 95 (160)
-.+|-|.-.|-|.|..+-..|.+++++. +.- ..++.|+++.-+ .+.+.|.+.-
T Consensus 35 ~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 114 (148)
T 3fkf_A 35 YLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAILT 114 (148)
T ss_dssp EEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCS
T ss_pred EEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCCC
Confidence 3588899999999999999999999887 443 667777776533 4455566644
Q ss_pred cceeeeeeeCceeEEecCCCCCceeeeecCChhHHHHHHHHHh
Q psy4160 96 PCTCMFFFRNKHIMIDLGTGNNNKINWALEDKQEMIDIVETVY 138 (160)
Q Consensus 96 P~tvmFFfrnkHm~vD~GTgnnnKin~~~~~kqe~iDiie~iy 138 (160)
-+|+ +++. .+-++.+...+.+++.+.|+.+-
T Consensus 115 ~P~~-~lid-----------~~G~i~~~~~~~~~l~~~l~~ll 145 (148)
T 3fkf_A 115 LPTN-ILLS-----------PTGKILARDIQGEALTGKLKELL 145 (148)
T ss_dssp SSEE-EEEC-----------TTSBEEEESCCHHHHHHHHHHHC
T ss_pred cCEE-EEEC-----------CCCeEEEecCCHHHHHHHHHHHH
Confidence 3343 3441 12245555458888888887653
No 120
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=92.56 E-value=0.94 Score=31.18 Aligned_cols=90 Identities=11% Similarity=0.060 Sum_probs=56.5
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCCccc-----------------------ccccccccccccee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITKVP-----------------------DFNKMYELYDPCTC 99 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~~Vp-----------------------dfn~myeL~dP~tv 99 (160)
.+|-|.-.|-|.|.++-..|.+++++.+.- ..++.|+.+.-+ .+.+.|.+.--+|+
T Consensus 33 ~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 112 (152)
T 2lja_A 33 IYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGIPRF 112 (152)
T ss_dssp EEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSSCCE
T ss_pred EEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCCCEE
Confidence 478899999999999999999999876542 566777776643 34445555433343
Q ss_pred eeeeeCceeEEecCCCCCceeeeecCChhHHHHHHHHHhhccc
Q psy4160 100 MFFFRNKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGAR 142 (160)
Q Consensus 100 mFFfrnkHm~vD~GTgnnnKin~~~~~kqe~iDiie~iyrga~ 142 (160)
+++...-..+....| ..+.+++..+|+.+..+-.
T Consensus 113 -~lid~~G~i~~~~~g--------~~~~~~l~~~l~~~~~~~~ 146 (152)
T 2lja_A 113 -ILLDRDGKIISANMT--------RPSDPKTAEKFNELLGLEG 146 (152)
T ss_dssp -EEECTTSCEEESSCC--------CTTCHHHHHHHHHHHTCCS
T ss_pred -EEECCCCeEEEccCC--------CCCHHHHHHHHHHHhcccc
Confidence 444311111222222 2356888888887765443
No 121
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=92.45 E-value=0.56 Score=32.55 Aligned_cols=90 Identities=13% Similarity=0.196 Sum_probs=55.9
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhc-ceEEEEEeCCccc----------------------ccccccccccccee
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITKVP----------------------DFNKMYELYDPCTC 99 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvkn-favIYlvDi~~Vp----------------------dfn~myeL~dP~tv 99 (160)
..||-|+-.|-|.|.++-..|.+++++.+. -..++.|++++-+ .+.+.|.+.--+|+
T Consensus 28 ~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 107 (151)
T 2f9s_A 28 GVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTT 107 (151)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSCEE
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCCCeE
Confidence 358899999999999999999999998765 2566677775532 34444555333343
Q ss_pred eeee-eCceeEEecCCCCCceeeeecCChhHHHHHHHHHhhccc
Q psy4160 100 MFFF-RNKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGAR 142 (160)
Q Consensus 100 mFFf-rnkHm~vD~GTgnnnKin~~~~~kqe~iDiie~iyrga~ 142 (160)
|++ ++..+. .. +.+. .+.+++.+.|+.+-++..
T Consensus 108 -~lid~~G~i~-~~-------~~G~-~~~~~l~~~l~~ll~~~~ 141 (151)
T 2f9s_A 108 -FLINPEGKVV-KV-------VTGT-MTESMIHDYMNLIKPGET 141 (151)
T ss_dssp -EEECTTSEEE-EE-------EESC-CCHHHHHHHHHHHSCC--
T ss_pred -EEECCCCcEE-EE-------EeCC-CCHHHHHHHHHHHHhhhh
Confidence 444 332222 11 1111 267899999998765543
No 122
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=92.36 E-value=0.55 Score=34.13 Aligned_cols=96 Identities=11% Similarity=0.158 Sum_probs=59.0
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCCc-----------------------------cccccccccc
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITK-----------------------------VPDFNKMYEL 93 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~~-----------------------------Vpdfn~myeL 93 (160)
+||-|+-.|-|.|.++-..|.+++++.+.- ..++.|+++. -....+.|.+
T Consensus 49 vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 128 (196)
T 2ywi_A 49 TVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYDA 128 (196)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTC
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhCC
Confidence 689999999999999888999998876643 5666677632 2223344444
Q ss_pred cccceeeeeeeCceeEEecCCCCCce--eeeecCChhHHHHHHHHHhhcc
Q psy4160 94 YDPCTCMFFFRNKHIMIDLGTGNNNK--INWALEDKQEMIDIVETVYRGA 141 (160)
Q Consensus 94 ~dP~tvmFFfrnkHm~vD~GTgnnnK--in~~~~~kqe~iDiie~iyrga 141 (160)
.--.++ |++......+..|.++++. ..+. .+.+++.+.|+.+-.+.
T Consensus 129 ~~~P~~-~lid~~G~i~~~~~~~~~~~~~~g~-~~~~~l~~~i~~ll~~~ 176 (196)
T 2ywi_A 129 ACTPDF-YIFDRDLKCVYRGQLDDSRPNNGIP-VTGESIRAALDALLEGR 176 (196)
T ss_dssp CEESEE-EEEETTCBEEEEECSSSCCTTTCCC-CCCHHHHHHHHHHHHTC
T ss_pred CCCCeE-EEEcCCCeEEEccccCcccccccCc-cCHHHHHHHHHHHHcCC
Confidence 322332 5554333334444444322 1222 26689999999887653
No 123
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=92.28 E-value=0.82 Score=31.50 Aligned_cols=43 Identities=14% Similarity=0.158 Sum_probs=34.8
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCCccc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITKVP 85 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~~Vp 85 (160)
..||-|...|-|.|.++-..|.+++++.+.- ..++.|+++.-+
T Consensus 30 ~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~ 73 (152)
T 3gl3_A 30 VVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKT 73 (152)
T ss_dssp EEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSH
T ss_pred EEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCH
Confidence 3578899999999999999999999987764 666777877544
No 124
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=92.17 E-value=0.84 Score=31.77 Aligned_cols=42 Identities=10% Similarity=0.176 Sum_probs=34.6
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCCccc
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITKVP 85 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~~Vp 85 (160)
.||-|+-.|-|.|.++-..|.+++++.+.- ..++.|++++-+
T Consensus 37 vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~ 79 (165)
T 3or5_A 37 YIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQL 79 (165)
T ss_dssp EEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCH
T ss_pred EEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCH
Confidence 588999999999999999999999987764 666777776643
No 125
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=92.12 E-value=0.086 Score=31.91 Aligned_cols=25 Identities=24% Similarity=0.371 Sum_probs=19.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+.+|+++||.||..||...+
T Consensus 38 ~~~~~~~~D~~~~g~i~~~ef~~~~ 62 (66)
T 3li6_A 38 LQLIFKSIDADGNGEIDQNEFAKFY 62 (66)
T ss_dssp HHHHHHHHCTTCSSSCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 4567888888888888888888764
No 126
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=91.91 E-value=0.93 Score=31.56 Aligned_cols=85 Identities=18% Similarity=0.228 Sum_probs=56.0
Q ss_pred hhhhhccCCCChh--hhhhHHHHHHHHHhh-hcc-eEEEEEeCCccc-------------------------cccccccc
Q psy4160 43 EDVIRFGHDWDPT--CMKMDEVLYSIAEKV-KNF-AVIYLVDITKVP-------------------------DFNKMYEL 93 (160)
Q Consensus 43 ~~viRFGrd~dp~--Cm~mDevL~kia~kv-knf-avIYlvDi~~Vp-------------------------dfn~myeL 93 (160)
-+||-|+..|-|+ |..+-..|.+++++. +.- ..++.|++++-+ ...+.|.+
T Consensus 35 ~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 114 (150)
T 3fw2_A 35 SLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSI 114 (150)
T ss_dssp EEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTC
T ss_pred EEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCC
Confidence 3589999999999 999999999998887 333 566777777654 23334444
Q ss_pred cccceeeeeeeCceeEEecCCCCCceeeeecCChhHHHHHHHHHhh
Q psy4160 94 YDPCTCMFFFRNKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYR 139 (160)
Q Consensus 94 ~dP~tvmFFfrnkHm~vD~GTgnnnKin~~~~~kqe~iDiie~iyr 139 (160)
.--+++ |++.. +-++.+...+.+++.+.|+.+-+
T Consensus 115 ~~~P~~-~lid~-----------~G~i~~~~~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 115 YKIPAN-ILLSS-----------DGKILAKNLRGEELKKKIENIVE 148 (150)
T ss_dssp CSSSEE-EEECT-----------TSBEEEESCCHHHHHHHHHHHHH
T ss_pred CccCeE-EEECC-----------CCEEEEccCCHHHHHHHHHHHHh
Confidence 332332 44411 12444544578888888887654
No 127
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=91.83 E-value=0.56 Score=32.54 Aligned_cols=92 Identities=12% Similarity=0.164 Sum_probs=57.7
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeC---------------------------Cccccccccccccc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDI---------------------------TKVPDFNKMYELYD 95 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi---------------------------~~Vpdfn~myeL~d 95 (160)
-.||-|+-.|-+.|.++-..|.+++++. ++ .++.|++ ++.+.+.+.|.+.-
T Consensus 32 ~vll~f~~~~C~~C~~~~~~l~~l~~~~-~v-~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 109 (154)
T 3ia1_A 32 PAVIVFWASWCTVCKAEFPGLHRVAEET-GV-PFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLG 109 (154)
T ss_dssp SEEEEEECTTCHHHHHHHHHHHHHHHHH-CC-CEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCS
T ss_pred eEEEEEEcccChhHHHHHHHHHHHHHHc-CC-eEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCc
Confidence 4588899999999999999999999987 54 4456666 24455566666644
Q ss_pred cceeeeeeeCceeEEecCCCCCceeeeecCChhHHHHHHHHHhhccccCC
Q psy4160 96 PCTCMFFFRNKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGR 145 (160)
Q Consensus 96 P~tvmFFfrnkHm~vD~GTgnnnKin~~~~~kqe~iDiie~iyrga~kGk 145 (160)
-++++++-++..+.- ++.+ ..+.+++.+.|+...++..+|-
T Consensus 110 ~P~~~lid~~G~i~~--------~~~g-~~~~~~l~~~l~~~~~~~~~~~ 150 (154)
T 3ia1_A 110 QPWTFVVDREGKVVA--------LFAG-RAGREALLDALLLAGADLEGHH 150 (154)
T ss_dssp SCEEEEECTTSEEEE--------EEES-BCCHHHHHHHHHHTTCCC----
T ss_pred ccEEEEECCCCCEEE--------EEcC-CCCHHHHHHHHHhccCcccccc
Confidence 334333323322211 1111 2457899999998887777663
No 128
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=91.72 E-value=0.8 Score=35.97 Aligned_cols=88 Identities=14% Similarity=0.121 Sum_probs=63.3
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhh----cceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCcee
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVK----NFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKI 120 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvk----nfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKi 120 (160)
|+-|...|=|.|.++-.+|.++|.+.+ .-..+..||+++-|+..+-|.+.-=+|+ ++ +++.+ ..|
T Consensus 142 vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~-~i-~G~~~----~~G----- 210 (243)
T 2hls_A 142 IETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSI-AI-NGYLV----FVG----- 210 (243)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEE-EE-TTEEE----EES-----
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeE-EE-CCEEE----EeC-----
Confidence 677999999999999999999998763 3466789999999988888888654564 33 54421 222
Q ss_pred eeecCChhHHHHHHHHHhhccccCCe
Q psy4160 121 NWALEDKQEMIDIVETVYRGARKGRG 146 (160)
Q Consensus 121 n~~~~~kqe~iDiie~iyrga~kGk~ 146 (160)
..+.++|+..|+......+.-.|
T Consensus 211 ---~~~~~~l~~~l~~~~~~~~~~~g 233 (243)
T 2hls_A 211 ---VPYEEDFLDYVKSAAEGRLTVKG 233 (243)
T ss_dssp ---CCCHHHHHHHHHHHHTTCCCCCC
T ss_pred ---CCCHHHHHHHHHHHhhcccccCC
Confidence 23568899888887655444333
No 129
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=91.48 E-value=0.99 Score=31.46 Aligned_cols=93 Identities=14% Similarity=0.123 Sum_probs=54.6
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhh-cceEEEEEeCCcccc------------------------cccccc--cccc
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVK-NFAVIYLVDITKVPD------------------------FNKMYE--LYDP 96 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvk-nfavIYlvDi~~Vpd------------------------fn~mye--L~dP 96 (160)
+||-|+-.|-|.|.++-..|.+++++.+ +=..++.|++++.+. +-+.|. +.--
T Consensus 27 vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 106 (151)
T 3raz_A 27 RIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNTVGVL 106 (151)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCCSCCS
T ss_pred EEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCccCCC
Confidence 4889999999999999999999988763 336677788764332 223333 3222
Q ss_pred ceeeeee-eCceeEEecCCCCCceeeeecCChhHHHHHHHHHhhccccCCe
Q psy4160 97 CTCMFFF-RNKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRG 146 (160)
Q Consensus 97 ~tvmFFf-rnkHm~vD~GTgnnnKin~~~~~kqe~iDiie~iyrga~kGk~ 146 (160)
+|+ |++ ++..+ +..-.| . .+.+++.+.|+.+-.+..++.+
T Consensus 107 P~~-~lid~~G~i-~~~~~g-------~-~~~~~l~~~l~~l~~~~~~~~~ 147 (151)
T 3raz_A 107 PFT-VVEAPKCGY-RQTITG-------E-VNEKSLTDAVKLAHSKCREGHH 147 (151)
T ss_dssp SEE-EEEETTTTE-EEECCS-------C-CCHHHHHHHHHHHHTC------
T ss_pred CEE-EEECCCCcE-EEEECC-------C-CCHHHHHHHHHHHHHHhhcccc
Confidence 232 444 22222 211122 1 2568999999999887766543
No 130
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=91.44 E-value=0.098 Score=31.51 Aligned_cols=25 Identities=24% Similarity=0.608 Sum_probs=18.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+.+|.++||.||..||...+
T Consensus 39 ~~~~~~~~D~~~dg~i~~~ef~~~~ 63 (67)
T 1tiz_A 39 IVKFFEEIDVDGNGELNADEFTSCI 63 (67)
T ss_dssp HHHHHHHHCCSSSSEECHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 3557777888888888888887653
No 131
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=91.30 E-value=0.69 Score=30.72 Aligned_cols=38 Identities=24% Similarity=0.280 Sum_probs=31.4
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCC
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT 82 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~ 82 (160)
.+|-|+..|-|.|.++-..|.+++++.+++ .++.|+++
T Consensus 28 ~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~~~ 65 (136)
T 1zzo_A 28 AVLWFWAPWCPTCQGEAPVVGQVAASHPEV-TFVGVAGL 65 (136)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTS-EEEEEECS
T ss_pred EEEEEEcCCChhHHHHHHHHHHHHHHcCCe-EEEEEeCC
Confidence 588999999999999999999999987754 45666664
No 132
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=91.05 E-value=0.95 Score=33.98 Aligned_cols=85 Identities=8% Similarity=0.011 Sum_probs=52.2
Q ss_pred hhhccCCC--Ch---hhhhhHHHHHHHHHhh--hcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCC
Q psy4160 45 VIRFGHDW--DP---TCMKMDEVLYSIAEKV--KNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNN 117 (160)
Q Consensus 45 viRFGrd~--dp---~Cm~mDevL~kia~kv--knfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnn 117 (160)
+|.|.-++ .| .|.++=..+.++|.+. +.-..+..||.++-|+..+-|.+.--+|+++| ++....
T Consensus 24 ~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~-~~~~~~-------- 94 (229)
T 2ywm_A 24 SIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIE-GDKDYG-------- 94 (229)
T ss_dssp EEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEE-SSSCCC--------
T ss_pred EEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEE-CCCccc--------
Confidence 44554333 45 4555555555565554 45677889999999999999999776776555 432221
Q ss_pred ceeeeecCChhHHHHHHHHHhh
Q psy4160 118 NKINWALEDKQEMIDIVETVYR 139 (160)
Q Consensus 118 nKin~~~~~kqe~iDiie~iyr 139 (160)
..+.+ ..+.++|.+.++.+..
T Consensus 95 ~~~~G-~~~~~~l~~~~~~~~~ 115 (229)
T 2ywm_A 95 IRYIG-LPAGLEFTTLINGIFH 115 (229)
T ss_dssp EEEES-CCCTTHHHHHHHHHHH
T ss_pred ceecC-CccHHHHHHHHHHHHh
Confidence 22233 3455677777766553
No 133
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=90.77 E-value=0.38 Score=29.82 Aligned_cols=58 Identities=9% Similarity=-0.116 Sum_probs=40.7
Q ss_pred hhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCcee
Q psy4160 46 IRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 46 iRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm 108 (160)
|.|.-+|=+.|.++...|.+++++.+.-..++-+| -++..+-|.+.--+|+++ +++.+
T Consensus 4 v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~ 61 (77)
T 1ilo_A 4 IQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV--DGELK 61 (77)
T ss_dssp EEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEE
T ss_pred EEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE--CCEEE
Confidence 45777899999999999999999876444455555 456667777765556444 55543
No 134
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=90.77 E-value=0.46 Score=37.35 Aligned_cols=83 Identities=12% Similarity=0.065 Sum_probs=57.4
Q ss_pred hhhhccCCC--ChhhhhhHHHHHHHHHhhhcc-----eEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCC
Q psy4160 44 DVIRFGHDW--DPTCMKMDEVLYSIAEKVKNF-----AVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGN 116 (160)
Q Consensus 44 ~viRFGrd~--dp~Cm~mDevL~kia~kvknf-----avIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgn 116 (160)
+++.|--+| .+.|.+|-.+|..+|+.-.++ ..+..+|.++-|+.-+-|.+..-+|+.+| ++ ..
T Consensus 28 v~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~-~g---~~------ 97 (243)
T 2hls_A 28 VEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL-GG---EV------ 97 (243)
T ss_dssp EEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-TT---TE------
T ss_pred EEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-CC---ce------
Confidence 356677677 788999999999999863222 66788999999988888998776676565 32 22
Q ss_pred CceeeeecCChhHHHHHHHHHhh
Q psy4160 117 NNKINWALEDKQEMIDIVETVYR 139 (160)
Q Consensus 117 nnKin~~~~~kqe~iDiie~iyr 139 (160)
+..+ ..+++++-+.++....
T Consensus 98 --~~~G-~~~~~~l~~fv~~~l~ 117 (243)
T 2hls_A 98 --RWTG-IPAGEEIRALVEVIMR 117 (243)
T ss_dssp --EEES-CCCTTHHHHHHHHHHH
T ss_pred --eEcC-CCcHHHHHHHHHHHHh
Confidence 2222 2344667777766654
No 135
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=90.69 E-value=0.56 Score=39.93 Aligned_cols=84 Identities=12% Similarity=0.129 Sum_probs=57.5
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhh-c--ceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCcee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVK-N--FAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKI 120 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvk-n--favIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKi 120 (160)
++|-|.-+|-+.|.+|-..+.+++++.+ . -..+.-+|.++-+.- + |.+.--+|++||-+++-..+.--+|
T Consensus 379 vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~~Pt~~~~~~G~~~~~~~~~G----- 451 (504)
T 2b5e_A 379 VLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIEGYPTIVLYPGGKKSESVVYQG----- 451 (504)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSSSSEEEEECCTTSCCCCBCCS-----
T ss_pred EEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCceecCeEEEEeCCceecceEecC-----
Confidence 4899999999999999999999999876 2 456677887765443 3 7786666876664333221221222
Q ss_pred eeecCChhHHHHHHHHH
Q psy4160 121 NWALEDKQEMIDIVETV 137 (160)
Q Consensus 121 n~~~~~kqe~iDiie~i 137 (160)
. .+.++|+..|+..
T Consensus 452 --~-~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 452 --S-RSLDSLFDFIKEN 465 (504)
T ss_dssp --C-CCHHHHHHHHHHH
T ss_pred --C-CCHHHHHHHHHhc
Confidence 2 3567788777764
No 136
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=90.51 E-value=0.86 Score=31.47 Aligned_cols=42 Identities=14% Similarity=0.248 Sum_probs=34.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhc-ceEEEEEeCCcc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITKV 84 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvkn-favIYlvDi~~V 84 (160)
-.||-|+..|-|.|..+-..|.+++++.+. -..++.|+++.-
T Consensus 30 ~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~ 72 (154)
T 3kcm_A 30 VVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEG 72 (154)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTT
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCc
Confidence 358889999999999999999999988765 356677787763
No 137
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=90.40 E-value=0.14 Score=30.75 Aligned_cols=25 Identities=20% Similarity=0.349 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+...+
T Consensus 3 l~~~F~~~D~d~~G~i~~~el~~~l 27 (67)
T 1tiz_A 3 AKRVFEKFDKNKDGKLSLDEFREVA 27 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 3567999999999999999999885
No 138
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=90.39 E-value=0.86 Score=36.73 Aligned_cols=60 Identities=20% Similarity=0.244 Sum_probs=47.4
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcc--eEEEEEeCCccccccccccccccceeeeeeeC
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNF--AVIYLVDITKVPDFNKMYELYDPCTCMFFFRN 105 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknf--avIYlvDi~~Vpdfn~myeL~dP~tvmFFfrn 105 (160)
++|-|.-+|-+.|.+|-.+|.++|++.+.- .++..+|.++-+ .+-|.+..-+|++||-++
T Consensus 270 ~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~~Pt~~~~~~~ 331 (361)
T 3uem_A 270 VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKFFPAS 331 (361)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCSSSEEEEECSS
T ss_pred EEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCCcccCeEEEEECC
Confidence 488999999999999999999999988764 677788887655 456778777786555333
No 139
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=90.25 E-value=0.19 Score=31.58 Aligned_cols=25 Identities=24% Similarity=0.446 Sum_probs=21.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+...+
T Consensus 5 l~~~F~~~D~~~~G~i~~~el~~~l 29 (78)
T 1k9u_A 5 MERIFKRFDTNGDGKISLSELTDAL 29 (78)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 5677889999999999999988776
No 140
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=89.85 E-value=0.81 Score=28.74 Aligned_cols=26 Identities=23% Similarity=0.281 Sum_probs=22.7
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
-.+..|+..|.++||.||..|+...+
T Consensus 8 ~l~~~F~~~D~d~~G~i~~~el~~~l 33 (83)
T 1yx7_A 8 ELEAAFKKLDANGDGYVTALELQTFM 33 (83)
T ss_dssp HHHHHHHHHSSSCSSSCSHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 35678999999999999999998875
No 141
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=89.84 E-value=0.16 Score=30.61 Aligned_cols=24 Identities=13% Similarity=0.296 Sum_probs=21.5
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+..|+..|.++||.||..|+...+
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l 26 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFV 26 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHH
T ss_pred HHHHHHHCCCCCCcccHHHHHHHH
Confidence 467899999999999999999875
No 142
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=89.63 E-value=1.6 Score=30.79 Aligned_cols=38 Identities=24% Similarity=0.559 Sum_probs=31.0
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCC
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT 82 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~ 82 (160)
.||-|.-.|-|.|.++-..|.+++++.+++ .++.|+++
T Consensus 40 ~lv~F~~~~C~~C~~~~~~l~~l~~~~~~v-~vv~i~~d 77 (165)
T 3ha9_A 40 VILWFMAAWCPSCVYMADLLDRLTEKYREI-SVIAIDFW 77 (165)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHCTTE-EEEEEECC
T ss_pred EEEEEECCCCcchhhhHHHHHHHHHHcCCc-EEEEEEec
Confidence 478899999999999999999999987744 44556665
No 143
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=89.27 E-value=1 Score=30.29 Aligned_cols=40 Identities=18% Similarity=0.352 Sum_probs=32.1
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhh-cceEEEEEeCCc
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVK-NFAVIYLVDITK 83 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvk-nfavIYlvDi~~ 83 (160)
.+|-|...|-|.|.++-..|.+++++.+ .-..++.|+++.
T Consensus 37 ~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 77 (145)
T 3erw_A 37 TILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN 77 (145)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGG
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccC
Confidence 4788999999999999999999999876 235556677643
No 144
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=88.70 E-value=0.23 Score=30.78 Aligned_cols=25 Identities=12% Similarity=0.353 Sum_probs=21.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+..|.++||.||..||...+
T Consensus 49 ~~~~~~~~D~~~dg~i~~~eF~~~~ 73 (78)
T 1cb1_A 49 LDDLFQELDKNGDGEVSFEEFQVLV 73 (78)
T ss_dssp SSHHHHHTCCCSSSSEEHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCcHHHHHHHH
Confidence 5678899999999999999998763
No 145
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=88.66 E-value=0.82 Score=31.52 Aligned_cols=41 Identities=12% Similarity=0.198 Sum_probs=33.7
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhh--cceEEEEEeCCc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVK--NFAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvk--nfavIYlvDi~~ 83 (160)
.++|-|+..|-|.|.++-..|.+++++.+ +-..++.|++++
T Consensus 30 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~ 72 (144)
T 1i5g_A 30 TVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDE 72 (144)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC
Confidence 35899999999999999999999999876 345566777765
No 146
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=88.56 E-value=0.18 Score=34.14 Aligned_cols=25 Identities=24% Similarity=0.414 Sum_probs=23.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+..++
T Consensus 7 l~~~F~~~D~d~~G~i~~~e~~~~l 31 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIEELGSAL 31 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGGGHHHHH
T ss_pred HHHHHHHhCCCCcCccCHHHHHHHH
Confidence 7889999999999999999999875
No 147
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=88.55 E-value=1.9 Score=31.07 Aligned_cols=41 Identities=12% Similarity=0.250 Sum_probs=34.1
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-e------EEEEEeCCc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-A------VIYLVDITK 83 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-a------vIYlvDi~~ 83 (160)
.+||-|+-.|-|.|.++-..|.+++++.++- . .++.|++++
T Consensus 61 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~ 108 (183)
T 3lwa_A 61 VVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD 108 (183)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC
T ss_pred EEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC
Confidence 3588999999999999999999999987764 4 777888876
No 148
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=88.47 E-value=0.39 Score=39.13 Aligned_cols=63 Identities=10% Similarity=0.055 Sum_probs=50.6
Q ss_pred hhhhhccCCCChhhhhhHHH-------HHHHHHhhhcc-eEEEEEeCCccccccccccccccceeeeeeeCc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEV-------LYSIAEKVKNF-AVIYLVDITKVPDFNKMYELYDPCTCMFFFRNK 106 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDev-------L~kia~kvknf-avIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnk 106 (160)
.++|-|.-+|-+ |.++-.. +.++|.+++.- ..+..||.++-++..+-|.+.--+|+++|-+++
T Consensus 30 ~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 100 (350)
T 1sji_A 30 VLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFDEEGSLYVLKGDR 100 (350)
T ss_dssp EEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTE
T ss_pred eEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCCccceEEEEECCc
Confidence 458999999999 9665444 88889888764 778899999999999999998878876764444
No 149
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=88.26 E-value=0.27 Score=33.13 Aligned_cols=55 Identities=13% Similarity=0.300 Sum_probs=36.7
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccc-------cccccccccccceeeeeeeCce
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVP-------DFNKMYELYDPCTCMFFFRNKH 107 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vp-------dfn~myeL~dP~tvmFFfrnkH 107 (160)
.++ |+.+|-|.|.++-..|.+++.+ + -++|++.-+ .+.+.|.+..-+|+ |.++++
T Consensus 22 vv~-f~a~~C~~C~~~~~~l~~~~~~---~---~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~ 83 (116)
T 2e7p_A 22 VVV-FSKTYCGYCNRVKQLLTQVGAS---Y---KVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQ 83 (116)
T ss_dssp EEE-EECTTCHHHHHHHHHHHHHTCC---C---EEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred EEE-EECCCChhHHHHHHHHHHcCCC---e---EEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 355 9999999999998888887543 3 345555443 46677777555564 444444
No 150
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=88.15 E-value=0.3 Score=29.71 Aligned_cols=25 Identities=28% Similarity=0.393 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 8 l~~~F~~~D~d~~G~i~~~el~~~l 32 (71)
T 2b1u_A 8 LQVAFRAFDQDGDGHITVDELRRAM 32 (71)
T ss_dssp HHHHHTTSCCSSSSEEEHHHHHHHG
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4678999999999999999999875
No 151
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=87.84 E-value=0.22 Score=30.37 Aligned_cols=25 Identities=28% Similarity=0.573 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+..|.++||.||..||...+
T Consensus 44 ~~~~~~~~d~~~~g~i~~~eF~~~~ 68 (71)
T 2b1u_A 44 LDAMIREADVDQDGRVNYEEFARML 68 (71)
T ss_dssp HHHHHHHCCSSSSSEEETTHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4678999999999999999998864
No 152
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=87.80 E-value=0.28 Score=30.72 Aligned_cols=25 Identities=20% Similarity=0.403 Sum_probs=21.9
Q ss_pred hHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 8 APFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
...|+.+|.++||.||..||...+.
T Consensus 41 ~~~~~~~D~~~dg~i~~~ef~~~~~ 65 (78)
T 1k9u_A 41 QRMMAEIDTDGDGFIDFNEFISFCN 65 (78)
T ss_dssp HHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 4678999999999999999998753
No 153
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=87.73 E-value=0.25 Score=32.60 Aligned_cols=25 Identities=12% Similarity=0.274 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+.+|+++||.||..|+..++
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l 26 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFV 26 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 3578999999999999999999875
No 154
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=87.72 E-value=0.33 Score=30.98 Aligned_cols=26 Identities=19% Similarity=0.303 Sum_probs=21.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
.+..|+..|.++||.||..|+...+.
T Consensus 13 l~~~F~~~D~d~~G~i~~~el~~~l~ 38 (86)
T 2opo_A 13 RERIFKRFDTNGDGKISSSELGDALK 38 (86)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCHHHHHHHHH
Confidence 45678889999999999999888763
No 155
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=87.70 E-value=0.26 Score=33.32 Aligned_cols=24 Identities=25% Similarity=0.487 Sum_probs=21.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+..+|...|+|+||.||..||...
T Consensus 74 ~~~~~~~~D~d~dG~Is~~EF~~~ 97 (103)
T 1snl_A 74 REHVMKNVDTNQDRLVTLEEFLAS 97 (103)
T ss_dssp HHHHHHHTCSSCSSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCCcCCHHHHHHH
Confidence 667899999999999999999875
No 156
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=87.57 E-value=0.47 Score=33.14 Aligned_cols=27 Identities=19% Similarity=0.360 Sum_probs=23.5
Q ss_pred cchhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 5 HCIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 5 ~C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.-++..|+..|+++||.||..|+...+
T Consensus 94 ~~~~~~F~~~D~d~~G~i~~~e~~~~l 120 (174)
T 1q80_A 94 GPLPLFFRAVDTNEDNNISRDEYGIFF 120 (174)
T ss_dssp THHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHH
Confidence 345678999999999999999999875
No 157
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=87.52 E-value=2.5 Score=28.98 Aligned_cols=88 Identities=15% Similarity=0.144 Sum_probs=53.9
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeC-----------------------Ccccccccccccccccee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDI-----------------------TKVPDFNKMYELYDPCTC 99 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi-----------------------~~Vpdfn~myeL~dP~tv 99 (160)
.||-|+..|-|.|.++-..|.+++++.+.- ..++.|+. +.-+.+.+.|.+.--+|+
T Consensus 31 ~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~ 110 (153)
T 2l5o_A 31 TLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQVYPTS 110 (153)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCSSSEE
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCccCeE
Confidence 588999999999999999999999887642 34444442 233445555665433343
Q ss_pred eeee-eCceeEEecCCCCCceeeeecCChhHHHHHHHHHhhcc
Q psy4160 100 MFFF-RNKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGA 141 (160)
Q Consensus 100 mFFf-rnkHm~vD~GTgnnnKin~~~~~kqe~iDiie~iyrga 141 (160)
|++ ++..+. .++.+ ..+.+++.+.|+.+-++.
T Consensus 111 -~lid~~G~i~--------~~~~g-~~~~~~l~~~l~~ll~~~ 143 (153)
T 2l5o_A 111 -VLIGKKGEIL--------KTYVG-EPDFGKLYQEIDTAWRNS 143 (153)
T ss_dssp -EEECSSSCCC--------EEEES-SCCHHHHHHHHHHHHHCC
T ss_pred -EEECCCCcEE--------EEEcC-CCCHHHHHHHHHHHHHhh
Confidence 344 222221 11122 246788999888877765
No 158
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=87.50 E-value=0.29 Score=32.29 Aligned_cols=25 Identities=16% Similarity=0.349 Sum_probs=22.6
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 29 l~~~F~~~D~d~~G~I~~~El~~~l 53 (91)
T 2pmy_A 29 LRSVFAACDANRSGRLEREEFRALC 53 (91)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCcHHHHHHHH
Confidence 5678999999999999999999875
No 159
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=87.48 E-value=1 Score=31.67 Aligned_cols=41 Identities=17% Similarity=0.311 Sum_probs=32.9
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhh-cceEEEEEeCCc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVK-NFAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvk-nfavIYlvDi~~ 83 (160)
-.||-|+-.|-|.|.++-..|.+++++.+ .-..++.|+.++
T Consensus 43 ~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 84 (158)
T 3hdc_A 43 IVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK 84 (158)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS
T ss_pred EEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH
Confidence 35889999999999999999999998876 335566677765
No 160
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=87.48 E-value=0.85 Score=33.10 Aligned_cols=41 Identities=22% Similarity=0.311 Sum_probs=33.1
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhc--ceEEEEEeCCcc
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKN--FAVIYLVDITKV 84 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvkn--favIYlvDi~~V 84 (160)
+||-|+-.|-|.|.++-..|.+++++.+. -..++.|++++-
T Consensus 51 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~ 93 (165)
T 3s9f_A 51 VFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEE 93 (165)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCS
T ss_pred EEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCC
Confidence 58999999999999999999999998763 345566666654
No 161
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=87.45 E-value=0.27 Score=30.52 Aligned_cols=25 Identities=16% Similarity=0.417 Sum_probs=18.6
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+.+|.++||.||..||...+
T Consensus 45 ~~~~~~~~d~~~~g~i~~~eF~~~~ 69 (77)
T 2joj_A 45 ILELMNEYDREGNGYIGFDDFLDIM 69 (77)
T ss_dssp HHHHHHHHCCSSSSEEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 3457777888888888888887763
No 162
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=87.04 E-value=1.1 Score=30.65 Aligned_cols=41 Identities=22% Similarity=0.374 Sum_probs=33.1
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhh--cceEEEEEeCCc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVK--NFAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvk--nfavIYlvDi~~ 83 (160)
.++|-|+-.|-|.|.++-..|.+++++.+ +-..++.|++++
T Consensus 30 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~ 72 (144)
T 1o73_A 30 TVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDE 72 (144)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS
T ss_pred EEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC
Confidence 35889999999999999999999999876 344556677765
No 163
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=87.00 E-value=3 Score=27.29 Aligned_cols=36 Identities=19% Similarity=0.262 Sum_probs=28.6
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEE
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLV 79 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlv 79 (160)
.||-|+-.|-|.|..+-..|.+++++.+.-..+..+
T Consensus 25 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i 60 (138)
T 4evm_A 25 VYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTV 60 (138)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEE
T ss_pred EEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 578999999999999999999999885533444444
No 164
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=86.79 E-value=0.37 Score=32.70 Aligned_cols=25 Identities=12% Similarity=0.010 Sum_probs=22.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+..++
T Consensus 7 l~~~F~~~D~d~~G~i~~~el~~~l 31 (140)
T 1ggw_A 7 YKQAFSLFDRHGTGRIPKTSIGDLL 31 (140)
T ss_dssp THHHHHHTCSSSSSEECHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 5678999999999999999999885
No 165
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=86.73 E-value=0.44 Score=32.36 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=22.6
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+..++
T Consensus 9 l~~~F~~~D~d~~G~i~~~el~~~l 33 (143)
T 3j04_B 9 FKEAFNMIDQNRDGFIDKEDLHDML 33 (143)
T ss_dssp HHHHHTTTCSSCTTCCCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCcCHHHHHHHH
Confidence 4678999999999999999999885
No 166
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=86.59 E-value=1.3 Score=30.70 Aligned_cols=41 Identities=12% Similarity=0.185 Sum_probs=33.1
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhh--cceEEEEEeCCc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVK--NFAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvk--nfavIYlvDi~~ 83 (160)
.++|-|+..|-+.|.++-..|.+++++.+ +-..++.|++++
T Consensus 30 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~ 72 (146)
T 1o8x_A 30 LVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDE 72 (146)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC
T ss_pred EEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCC
Confidence 35899999999999999999999999876 345566677664
No 167
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=86.42 E-value=0.41 Score=31.41 Aligned_cols=25 Identities=20% Similarity=0.438 Sum_probs=22.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+..+|+..|.|+||.||..||...+
T Consensus 58 ~~~l~~~~D~~~dg~I~~~EF~~~~ 82 (99)
T 1qls_A 58 LDRMMKKLDLDSDGQLDFQEFLNLI 82 (99)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 5678999999999999999998864
No 168
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=86.34 E-value=1.4 Score=30.30 Aligned_cols=36 Identities=14% Similarity=0.372 Sum_probs=27.8
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeC
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDI 81 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi 81 (160)
.||-|+..|-|.|.++-..|.+++++ .++. ++.|++
T Consensus 45 ~ll~f~~~~C~~C~~~~~~l~~l~~~-~~v~-~v~v~~ 80 (156)
T 1kng_A 45 SLVNVWASWCVPCHDEAPLLTELGKD-KRFQ-LVGINY 80 (156)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHTTC-TTSE-EEEEEE
T ss_pred EEEEEEcccCHhHHHHHHHHHHHHhc-CCeE-EEEEEC
Confidence 47889999999999999999988876 4444 444554
No 169
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=86.31 E-value=0.39 Score=29.59 Aligned_cols=25 Identities=12% Similarity=0.392 Sum_probs=19.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+..|.++||.||..||...+
T Consensus 47 ~~~l~~~~D~~~~g~i~~~eF~~~~ 71 (76)
T 1qx2_A 47 LDEMIEEVDKNGDGEVSFEEFLVMM 71 (76)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 4567888888889999998887763
No 170
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=86.24 E-value=0.32 Score=32.07 Aligned_cols=25 Identities=36% Similarity=0.553 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+..+|+..|.++||.||..||..++
T Consensus 63 ~~~~~~~~D~d~dg~I~~~EF~~~~ 87 (91)
T 2pmy_A 63 AEAVFQRLDADRDGAITFQEFARGF 87 (91)
T ss_dssp HHHHHHHHCTTCSSEECHHHHTHHH
T ss_pred HHHHHHHhCCCCCCCEeHHHHHHHH
Confidence 4678999999999999999998874
No 171
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=86.02 E-value=0.47 Score=29.90 Aligned_cols=21 Identities=19% Similarity=0.387 Sum_probs=19.6
Q ss_pred HhhccCCCCCCcccHHHHHHh
Q psy4160 10 FLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 10 Ff~~CD~~~D~~is~~EW~~C 30 (160)
.|+..|.++||.||..||...
T Consensus 54 ~~~~~D~~~dg~I~~~eF~~~ 74 (83)
T 1yx7_A 54 LIKMADKNSDGKISKEEFLNA 74 (83)
T ss_dssp HHTTTCSSSCSCCSHHHHHHH
T ss_pred HHHHhCCCCCCCCcHHHHHHh
Confidence 899999999999999999864
No 172
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=85.92 E-value=0.29 Score=30.89 Aligned_cols=25 Identities=20% Similarity=0.377 Sum_probs=21.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++ .|+..|.++||.||..|+...+.
T Consensus 11 l~-~F~~~D~d~~G~i~~~el~~~l~ 35 (81)
T 1c7v_A 11 LR-AFKVFDANGDGVIDFDEFKFIMQ 35 (81)
T ss_dssp HH-HHHHHSCSGGGEECHHHHHHHSS
T ss_pred HH-HHHHHCCCCCCcCCHHHHHHHHH
Confidence 56 78899999999999999988764
No 173
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=85.71 E-value=0.39 Score=30.42 Aligned_cols=24 Identities=13% Similarity=0.252 Sum_probs=17.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+...|+.+|.++||.||..||...
T Consensus 52 ~~~~~~~~d~~~~g~i~~~eF~~~ 75 (85)
T 2ktg_A 52 ISEIVKDYDKDNSGKFDQETFLTI 75 (85)
T ss_dssp HHHHHHHHSSSSCSEEEHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHH
Confidence 345677777777777777777665
No 174
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=85.32 E-value=0.33 Score=33.26 Aligned_cols=72 Identities=15% Similarity=0.199 Sum_probs=50.8
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCceeEEecCCCCCceeeeec
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWAL 124 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnnnKin~~~ 124 (160)
|+-|+++|=+.|.++-.+|.+++.+. ..-|||++-|+..+-|.+.-| |+++ -+++++- |.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~vP-tl~~-~~G~~v~------------g~~ 63 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLRVP-VLRD-PMGRELD------------WPF 63 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTTCS-EEEC-TTCCEEE------------SCC
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCCcC-eEEE-ECCEEEe------------CCC
Confidence 45699999999999999998876531 357999999998877777745 5444 4566652 323
Q ss_pred CChhHHHHHHHH
Q psy4160 125 EDKQEMIDIVET 136 (160)
Q Consensus 125 ~~kqe~iDiie~ 136 (160)
+++++...++.
T Consensus 64 -~~~~L~~~l~~ 74 (87)
T 1ttz_A 64 -DAPRLRAWLDA 74 (87)
T ss_dssp -CHHHHHHHHHT
T ss_pred -CHHHHHHHHHH
Confidence 55666666654
No 175
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=85.19 E-value=0.47 Score=32.89 Aligned_cols=25 Identities=12% Similarity=0.197 Sum_probs=22.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+..++
T Consensus 20 l~~~F~~~D~d~~G~i~~~el~~~l 44 (156)
T 1wdc_B 20 MKEAFSMIDVDRDGFVSKEDIKAIS 44 (156)
T ss_dssp HHHHHHHHCTTCSSSCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4577999999999999999999886
No 176
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=85.14 E-value=3.2 Score=29.99 Aligned_cols=39 Identities=13% Similarity=0.041 Sum_probs=31.5
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDI 81 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi 81 (160)
.+||-|+-.|-|.|.++-..|.+++++.+.-..++.|++
T Consensus 35 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~ 73 (188)
T 2cvb_A 35 LLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINA 73 (188)
T ss_dssp EEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEEC
T ss_pred EEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEc
Confidence 358899999999999988899999988665356666766
No 177
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=85.12 E-value=2.8 Score=29.61 Aligned_cols=44 Identities=14% Similarity=0.074 Sum_probs=35.7
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCCcccc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITKVPD 86 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~~Vpd 86 (160)
.+||-|+-.|-|.|..+-..|.+++++.+.- ..++.|++++.++
T Consensus 37 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~ 81 (152)
T 2lrt_A 37 VVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEH 81 (152)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHH
T ss_pred EEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHH
Confidence 3589999999999999888899998887654 6677888877664
No 178
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=85.08 E-value=0.43 Score=33.77 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=19.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+...+
T Consensus 86 ~~~~F~~~D~d~~G~I~~~E~~~~l 110 (179)
T 2f2o_A 86 IREAFRVFDKDGNGYISAAELRHVM 110 (179)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 5667788888888888888887765
No 179
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=85.04 E-value=0.47 Score=32.81 Aligned_cols=25 Identities=16% Similarity=0.309 Sum_probs=22.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+..++
T Consensus 18 l~~~F~~~D~d~~G~i~~~el~~~l 42 (153)
T 2ovk_B 18 LKEAFTMIDQDRDGFIGMEDLKDMF 42 (153)
T ss_dssp HHHHHHHHCCSTTTCCCHHHHHHHT
T ss_pred HHHHHHHhCCCCCCeECHHHHHHHH
Confidence 4568999999999999999999985
No 180
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=84.95 E-value=0.44 Score=30.34 Aligned_cols=24 Identities=21% Similarity=0.440 Sum_probs=21.4
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
...|+.+|.++||.||..||...+
T Consensus 49 ~~~~~~~D~~~dg~i~~~eF~~~~ 72 (86)
T 2opo_A 49 RRMMAEIDTDGDGFISFDEFTDFA 72 (86)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHH
Confidence 467899999999999999999875
No 181
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=84.87 E-value=2 Score=34.54 Aligned_cols=89 Identities=9% Similarity=0.032 Sum_probs=63.2
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCC--ccccccccccccc--cceeeeeeeCceeEEecCCCCCcee
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT--KVPDFNKMYELYD--PCTCMFFFRNKHIMIDLGTGNNNKI 120 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~--~Vpdfn~myeL~d--P~tvmFFfrnkHm~vD~GTgnnnKi 120 (160)
++-|-..|.++|.++-..|.++|++.+.-..+..+|.+ +-+...+.|.|.. =+|+.+|-.++. ..|.
T Consensus 139 ~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~---------~~ky 209 (361)
T 3uem_A 139 ILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEE---------MTKY 209 (361)
T ss_dssp EEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC-----------CCEE
T ss_pred EEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCc---------cccc
Confidence 57798899999999999999999998876778889998 6788888888853 345544432221 1222
Q ss_pred e--eecCChhHHHHHHHHHhhccc
Q psy4160 121 N--WALEDKQEMIDIVETVYRGAR 142 (160)
Q Consensus 121 n--~~~~~kqe~iDiie~iyrga~ 142 (160)
. .-.-+.+++.+.++....|..
T Consensus 210 ~~~~~~~~~~~l~~fi~~~l~g~~ 233 (361)
T 3uem_A 210 KPESEELTAERITEFCHRFLEGKI 233 (361)
T ss_dssp CCSSCCCCHHHHHHHHHHHHTTCS
T ss_pred CCCccccCHHHHHHHHHHHhcCCC
Confidence 2 113466888888888877653
No 182
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=84.55 E-value=0.97 Score=32.12 Aligned_cols=23 Identities=22% Similarity=0.336 Sum_probs=10.9
Q ss_pred hHHhhccCCCCCCcccHHHHHHh
Q psy4160 8 APFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
...|+.+|.++||.||..||...
T Consensus 90 ~~~~~~~D~d~~g~i~~~ef~~~ 112 (191)
T 3khe_A 90 DHILQSVDFDRNGYIEYSEFVTV 112 (191)
T ss_dssp HHHHHHTCTTCSSSEEHHHHHHH
T ss_pred HHHHHHhCCCCCCcCCHHHHHHH
Confidence 33444445555555555554443
No 183
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=84.43 E-value=0.53 Score=30.41 Aligned_cols=23 Identities=17% Similarity=0.342 Sum_probs=17.5
Q ss_pred hHHhhccCCCCCCcccHHHHHHh
Q psy4160 8 APFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
...|+.+|.++||.||..||...
T Consensus 59 ~~l~~~~D~~~dg~i~~~eF~~~ 81 (90)
T 1avs_A 59 DAIIEEVDEDGSGTIDFEEFLVM 81 (90)
T ss_dssp HHHHHHHCTTCCSSEEHHHHHHH
T ss_pred HHHHHHhCCCCCCeEeHHHHHHH
Confidence 45677778888888888888765
No 184
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=84.41 E-value=0.57 Score=31.28 Aligned_cols=24 Identities=17% Similarity=0.443 Sum_probs=16.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+...|+..|.++||.|+..||...
T Consensus 67 ~~~l~~~~D~d~dG~I~~~EF~~~ 90 (94)
T 2kz2_A 67 VDEMIREADIDGDGQVNYEEFVQM 90 (94)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHH
Confidence 345666677777777777777665
No 185
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=84.41 E-value=0.47 Score=29.36 Aligned_cols=25 Identities=16% Similarity=0.202 Sum_probs=22.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|....+
T Consensus 9 l~~~F~~~D~d~~G~i~~~el~~~l 33 (77)
T 2joj_A 9 IKEAFDLFDTNKTGSIDYHELKVAM 33 (77)
T ss_dssp HHHHHHHHCCSSSSEEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCcHHHHHHHH
Confidence 4567999999999999999999875
No 186
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=84.07 E-value=0.61 Score=29.49 Aligned_cols=25 Identities=20% Similarity=0.298 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+..|.++||.||..|....+
T Consensus 16 l~~~F~~~D~d~~G~i~~~el~~~l 40 (85)
T 2ktg_A 16 YKEAFQLFDKDNDNKLTAEELGTVM 40 (85)
T ss_dssp HHHHHHHTCTTCCSEEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4677999999999999999999875
No 187
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=83.91 E-value=0.59 Score=32.21 Aligned_cols=25 Identities=4% Similarity=0.135 Sum_probs=22.9
Q ss_pred hhHHhhccC-CCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCD-ADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD-~~~D~~is~~EW~~C~ 31 (160)
++..|+..| .++||.||..|+..++
T Consensus 15 l~~~F~~~D~~~~~G~i~~~e~~~~l 40 (158)
T 2jnf_A 15 LETAFRDFETPEGSGRVSTDQIGIIL 40 (158)
T ss_dssp HHHHHHHSBCSSSCSSEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCcCcHHHHHHHH
Confidence 567899999 9999999999999986
No 188
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=83.84 E-value=0.63 Score=30.71 Aligned_cols=24 Identities=13% Similarity=0.324 Sum_probs=21.0
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
...|+..|.|+||.||..||...+
T Consensus 52 ~~l~~~~D~d~dG~I~~~EF~~~~ 75 (93)
T 1xk4_A 52 DVWFKELDINTDGAVNFQEFLILV 75 (93)
T ss_dssp HHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCcHHHHHHHH
Confidence 678899999999999999998763
No 189
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=83.80 E-value=0.73 Score=31.73 Aligned_cols=25 Identities=12% Similarity=0.162 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+.-|+..|.++||.||..|....+
T Consensus 13 ~~~~F~~~D~d~dG~Is~~el~~~l 37 (99)
T 1qjt_A 13 YEKYYRQVEAGNTGRVLALDAAAFL 37 (99)
T ss_dssp HHHHHHHHCCTTSSCCCSHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 4667999999999999999998874
No 190
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=83.70 E-value=0.54 Score=32.83 Aligned_cols=25 Identities=24% Similarity=0.418 Sum_probs=22.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+.+|+|+||.||..|+..++
T Consensus 8 l~~~F~~~D~d~~G~i~~~El~~~l 32 (174)
T 1q80_A 8 MKTYFNRIDFDKDGAITRMDFESMA 32 (174)
T ss_dssp HHHHHHHHCTTCSSEESHHHHHHHH
T ss_pred HHHHHHhcCCCCCCcEeHHHHHHHH
Confidence 4678999999999999999999874
No 191
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=83.70 E-value=0.37 Score=31.14 Aligned_cols=25 Identities=12% Similarity=0.351 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+..|.++||.||..||..++
T Consensus 54 ~~~~~~~~D~d~dg~i~~~eF~~~~ 78 (93)
T 1k2h_A 54 VDKIMKELDENGDGEVDFQEFVVLV 78 (93)
T ss_dssp HHHHHHHHHHCTTSCCCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4678999999999999999999874
No 192
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=83.65 E-value=0.33 Score=34.21 Aligned_cols=24 Identities=13% Similarity=0.158 Sum_probs=21.4
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+.-|+..|+|+||.||..|+..++
T Consensus 13 ~~~F~~~D~d~~G~I~~~El~~~l 36 (148)
T 2lmt_A 13 KDAFVQFDKEGTGKIATRELGTLM 36 (148)
T ss_dssp HHHHHHHHCSSCCEEEGGGHHHHH
T ss_pred HHHHHHHcCCCCCeECHHHHHHHH
Confidence 456899999999999999999875
No 193
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=83.46 E-value=0.61 Score=30.01 Aligned_cols=25 Identities=16% Similarity=0.488 Sum_probs=20.7
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+.+|.++||.||..||...+
T Consensus 47 ~~~l~~~~d~~~dg~i~~~eF~~~~ 71 (92)
T 2kn2_A 47 VEQMIKEADLDGDGQVNYEEFVKMM 71 (92)
T ss_dssp HHHHHHHHCSSCCSSEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 4567888899999999999998764
No 194
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=83.39 E-value=0.38 Score=30.64 Aligned_cols=23 Identities=17% Similarity=0.322 Sum_probs=14.3
Q ss_pred hHHhhccCCCCCCcccHHHHHHh
Q psy4160 8 APFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
..+|+..|.++||.||..||..+
T Consensus 62 ~~l~~~~d~~~~g~i~~~eF~~~ 84 (87)
T 1s6j_A 62 KDLMDAADIDKSGTIDYGEFIAA 84 (87)
T ss_dssp HHHHHHHCTTCSSEECHHHHTTC
T ss_pred HHHHHHhCCCCCCcCcHHHHHHH
Confidence 44566666666666666666553
No 195
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=83.31 E-value=0.64 Score=33.98 Aligned_cols=27 Identities=19% Similarity=0.175 Sum_probs=24.4
Q ss_pred cchhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 5 HCIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 5 ~C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.-+..+|+..|+|+||.||..||...+
T Consensus 157 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 183 (207)
T 2d8n_A 157 KRAEKIWKYFGKNDDDKLTEKEFIEGT 183 (207)
T ss_dssp HHHHHHHHHTTCCTTCCEEHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence 357889999999999999999999985
No 196
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=83.20 E-value=0.92 Score=30.56 Aligned_cols=25 Identities=20% Similarity=0.166 Sum_probs=21.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+.-|+..|.|+||.||..|-...+
T Consensus 12 ~~~~F~~~D~d~dG~I~~~el~~~l 36 (95)
T 1c07_A 12 YDEIFLKTDKDMDGFVSGLEVREIF 36 (95)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 3567999999999999999998874
No 197
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=83.13 E-value=1.1 Score=31.60 Aligned_cols=34 Identities=18% Similarity=0.369 Sum_probs=27.2
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEe
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVD 80 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvD 80 (160)
.||-|+-.|-|.|.++-..|.+++++ ++.+ +.|+
T Consensus 54 vll~F~a~~C~~C~~~~~~l~~l~~~--~v~v-v~v~ 87 (168)
T 2b1k_A 54 VLLNVWATWCPTCRAEHQYLNQLSAQ--GIRV-VGMN 87 (168)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHT--TCCE-EEEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHC--CCEE-EEEE
Confidence 58899999999999999999998886 5544 4444
No 198
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=83.08 E-value=0.33 Score=30.97 Aligned_cols=25 Identities=24% Similarity=0.507 Sum_probs=22.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+..+|+..|.|+||.||..||...+
T Consensus 53 ~~~~~~~~D~~~dg~i~~~eF~~~~ 77 (90)
T 1k8u_A 53 IARLMEDLDRNKDQEVNFQEYVTFL 77 (90)
T ss_dssp HHHHHHHHHHTTTCEEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCcHHHHHHHH
Confidence 4678999999999999999998763
No 199
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=83.07 E-value=0.43 Score=32.71 Aligned_cols=58 Identities=22% Similarity=0.372 Sum_probs=40.9
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCC--ccccccccccccccceeeeeeeCcee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT--KVPDFNKMYELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~--~Vpdfn~myeL~dP~tvmFFfrnkHm 108 (160)
.|+-|+.+|=|.|.++-..|.+++.. ..+..+|++ +-|+..+-|...-| + +|.+++++
T Consensus 18 ~v~~f~~~~C~~C~~~~~~L~~l~~~----i~~~~vdi~~~~~~el~~~~g~~vP-~--l~~~g~~~ 77 (100)
T 1wjk_A 18 VLTLFTKAPCPLCDEAKEVLQPYKDR----FILQEVDITLPENSTWYERYKFDIP-V--FHLNGQFL 77 (100)
T ss_dssp EEEEEECSSCHHHHHHHHHTSTTSSS----SEEEEEETTSSTTHHHHHHSSSSCS-E--EEESSSEE
T ss_pred EEEEEeCCCCcchHHHHHHHHHhhhC----CeEEEEECCCcchHHHHHHHCCCCC-E--EEECCEEE
Confidence 36669999999999999888776543 466789998 66776666662235 4 34555543
No 200
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=83.07 E-value=0.35 Score=33.06 Aligned_cols=25 Identities=12% Similarity=0.084 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+..++
T Consensus 6 l~~~F~~~D~d~~G~i~~~el~~~l 30 (148)
T 1m45_A 6 NKDIFTLFDKKGQGAIAKDSLGDYL 30 (148)
T ss_dssp CTTCHHHHCTTCCSEEEGGGHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 4567999999999999999998875
No 201
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=82.99 E-value=0.69 Score=31.21 Aligned_cols=25 Identities=16% Similarity=0.033 Sum_probs=22.6
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+..++
T Consensus 10 l~~~F~~~D~~~~G~i~~~el~~~l 34 (149)
T 2mys_C 10 FKEAFLLFDRTGDAKITASQVGDIA 34 (149)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 5678999999999999999998875
No 202
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=82.91 E-value=0.86 Score=30.12 Aligned_cols=25 Identities=4% Similarity=0.141 Sum_probs=19.7
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+..+|+.+|.++||.|+..||...+
T Consensus 62 ~~~l~~~~d~~~~g~i~~~eF~~~~ 86 (105)
T 1wlz_A 62 FDRLWNEMPVNAKGRLKYPDFLSRF 86 (105)
T ss_dssp HHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCcHHHHHHHH
Confidence 4567788888888888888888764
No 203
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=82.81 E-value=0.65 Score=31.05 Aligned_cols=25 Identities=12% Similarity=0.278 Sum_probs=22.1
Q ss_pred chhHHhhccCCCCCCcccHHHHHHh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
=+...|+..|+|+||.|+..|+..-
T Consensus 53 ~v~~~~~~~D~d~dG~I~f~EF~~~ 77 (92)
T 3rm1_A 53 VVDKVMETLDSNGDGECDFQEFMAF 77 (92)
T ss_dssp HHHHHHHHHCTTSSSSBCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCcHHHHHHH
Confidence 3567899999999999999999875
No 204
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=82.42 E-value=0.62 Score=31.38 Aligned_cols=25 Identities=20% Similarity=0.230 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 13 l~~~F~~~D~~~~G~i~~~e~~~~l 37 (147)
T 4ds7_A 13 FKEAFALFDKDNSGSISASELATVM 37 (147)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCHHHHHHHH
Confidence 4567999999999999999998875
No 205
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=82.37 E-value=6.5 Score=28.14 Aligned_cols=40 Identities=15% Similarity=0.215 Sum_probs=32.0
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhh-cceEEEEEeCCc
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVK-NFAVIYLVDITK 83 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvk-nfavIYlvDi~~ 83 (160)
+||-|+-.|-+.|.++-..|.+++++.+ +-..++.|+++.
T Consensus 63 vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~ 103 (186)
T 1jfu_A 63 LLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDT 103 (186)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCC
T ss_pred EEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCC
Confidence 5899999999999999899999998876 335566666654
No 206
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=82.20 E-value=0.68 Score=31.83 Aligned_cols=25 Identities=20% Similarity=0.283 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+|+||.||..|+...+
T Consensus 6 l~~~F~~~D~d~dG~i~~~E~~~~l 30 (166)
T 3akb_A 6 IAARFTTFDQDGNGHIDRSDFSGAA 30 (166)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHhHHcCCCCCCcCHHHHHHHH
Confidence 5678999999999999999998853
No 207
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=82.15 E-value=1.8 Score=35.81 Aligned_cols=65 Identities=14% Similarity=0.031 Sum_probs=50.1
Q ss_pred hhhhhccCCCChhhhhhH------HHHHHHHHhhhcc-eEEEEEeCCccccccccccccccceeeeeeeCce
Q psy4160 43 EDVIRFGHDWDPTCMKMD------EVLYSIAEKVKNF-AVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKH 107 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mD------evL~kia~kvknf-avIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkH 107 (160)
-+++-|.-+|-+.|..+- -++.++|..++.- ..+.-||.++-|+..+-|.+.--+|+++|-+++.
T Consensus 32 ~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~~PTl~~f~~G~~ 103 (367)
T 3us3_A 32 VLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTEEDSIYVFKEDEV 103 (367)
T ss_dssp EEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTEE
T ss_pred eEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCcCceEEEEECCcE
Confidence 458899999988774433 2677888877653 7789999999999999999988889876654443
No 208
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=82.05 E-value=0.67 Score=33.52 Aligned_cols=25 Identities=20% Similarity=0.303 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+..|+|+||.||..||..++
T Consensus 41 l~~~F~~~D~d~~G~i~~~El~~~l 65 (180)
T 3mse_B 41 INELFYKLDTNHNGSLSHREIYTVL 65 (180)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 4578999999999999999999885
No 209
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=81.89 E-value=1.4 Score=28.27 Aligned_cols=24 Identities=25% Similarity=0.274 Sum_probs=21.5
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+..|+..|.++||.||..|+...+
T Consensus 23 ~~~F~~~D~d~~G~i~~~el~~~l 46 (90)
T 1avs_A 23 KAAFDMFDADGGGDISTKELGTVM 46 (90)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHCCCCCCcCcHHHHHHHH
Confidence 567999999999999999999875
No 210
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=81.81 E-value=4.6 Score=29.73 Aligned_cols=41 Identities=12% Similarity=0.054 Sum_probs=32.3
Q ss_pred hhhhhcc-CCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCCc
Q psy4160 43 EDVIRFG-HDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFG-rd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~~ 83 (160)
.+||-|+ -.|-|.|..+=..|.+++++.+.- ..++.|++++
T Consensus 35 ~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~ 77 (198)
T 1zof_A 35 GVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDS 77 (198)
T ss_dssp EEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred cEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCC
Confidence 3689999 789999999888888888876543 5667777764
No 211
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=81.73 E-value=0.73 Score=32.10 Aligned_cols=25 Identities=24% Similarity=0.263 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+..++
T Consensus 30 l~~~F~~~D~d~~G~i~~~el~~~l 54 (169)
T 3qrx_A 30 IREAFDLFDTDGSGTIDAKELKVAM 54 (169)
T ss_dssp HHHHHHHHCTTCCSEECHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4678999999999999999999876
No 212
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=81.70 E-value=0.89 Score=34.28 Aligned_cols=26 Identities=23% Similarity=0.392 Sum_probs=23.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++.+|+..|.|+||.||..||...+.
T Consensus 168 ~~~~f~~~D~d~dG~I~~~EF~~~~~ 193 (226)
T 2zfd_A 168 IDKTFEEADTKHDGKIDKEEWRSLVL 193 (226)
T ss_dssp HHHHHHHHCSSCSSEECHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 46788999999999999999999864
No 213
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=81.64 E-value=0.75 Score=33.92 Aligned_cols=26 Identities=15% Similarity=0.263 Sum_probs=23.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++..|+.+|+|+||.||..|+..++.
T Consensus 59 l~~~F~~~D~d~~G~i~~~el~~~l~ 84 (196)
T 3dtp_E 59 FKEAFQLIDQDKDGFISKNDIRATFD 84 (196)
T ss_dssp HHHHHHHHCCSCSSBCCHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 46789999999999999999999863
No 214
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=81.58 E-value=0.83 Score=29.10 Aligned_cols=23 Identities=17% Similarity=0.177 Sum_probs=17.6
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+...|+..|.++||.||. ||...
T Consensus 55 ~~~~~~~~d~~~~g~i~~-eF~~~ 77 (86)
T 1j7q_A 55 IMKEARGPKGDKKNIGPE-EWLTL 77 (86)
T ss_dssp HHHHHHCSSCSSCCBCTT-HHHHH
T ss_pred HHHHHHHhCCCCCCcCCH-HHHHH
Confidence 346777888888888888 88765
No 215
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=81.57 E-value=1.1 Score=32.69 Aligned_cols=26 Identities=15% Similarity=0.285 Sum_probs=23.7
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
-++..|+..|.|+||.||..||...+
T Consensus 149 ~~~~~f~~~D~d~dG~Is~~Ef~~~~ 174 (204)
T 1jba_A 149 VVDRIFLLVDENGDGQLSLNEFVEGA 174 (204)
T ss_dssp HHHHHHHHHCCSCCSCBCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 46788999999999999999999986
No 216
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=81.57 E-value=2.2 Score=34.40 Aligned_cols=60 Identities=13% Similarity=0.198 Sum_probs=46.7
Q ss_pred hhhhhccC--CCChhhhhhHHHHHHHHHhhh--cceEEEEEeCCc-----ccccccccccc--ccceeeeeeeCc
Q psy4160 43 EDVIRFGH--DWDPTCMKMDEVLYSIAEKVK--NFAVIYLVDITK-----VPDFNKMYELY--DPCTCMFFFRNK 106 (160)
Q Consensus 43 ~~viRFGr--d~dp~Cm~mDevL~kia~kvk--nfavIYlvDi~~-----Vpdfn~myeL~--dP~tvmFFfrnk 106 (160)
.+++-|.- +|-+ |..++.++|+..+ .-..++-||+++ -|+..+-|.+. .-+|++||-+++
T Consensus 24 ~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~PTl~~f~~G~ 94 (240)
T 2qc7_A 24 FVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGD 94 (240)
T ss_dssp EEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGCSEEEEEETTC
T ss_pred CEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCCCEEEEEeCCC
Confidence 45788988 6654 8889999999875 347889999765 78888999998 788887775444
No 217
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=81.50 E-value=0.78 Score=32.11 Aligned_cols=27 Identities=19% Similarity=0.340 Sum_probs=23.8
Q ss_pred cchhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 5 HCIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 5 ~C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.-++..|+..|.|+||.||..|+...+
T Consensus 105 ~~~~~~F~~~D~d~dG~Is~~E~~~~l 131 (185)
T 2sas_A 105 NRIPFLFKGMDVSGDGIVDLEEFQNYC 131 (185)
T ss_dssp HHHHHHHHHHCTTSSSCCCHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCeEcHHHHHHHH
Confidence 346789999999999999999999874
No 218
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=81.37 E-value=0.98 Score=31.20 Aligned_cols=25 Identities=20% Similarity=0.321 Sum_probs=21.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++.-|+..|.|+||.||..|...++
T Consensus 38 l~~~F~~~D~d~~G~I~~~El~~~l 62 (100)
T 2lv7_A 38 IREAFKVFDRDGNGFISKQELGTAM 62 (100)
T ss_dssp HHHHHHHTCSSCSSCBCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCCHHHHHHHH
Confidence 3566999999999999999998875
No 219
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=81.33 E-value=1.9 Score=28.22 Aligned_cols=25 Identities=24% Similarity=0.371 Sum_probs=22.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+.+|.++||.||..||...+
T Consensus 38 ~~~~~~~~D~~~~g~i~~~ef~~~~ 62 (134)
T 1jfj_A 38 LQLIFKSIDADGNGEIDQNEFAKFY 62 (134)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHT
T ss_pred HHHHHHHHcCCCCCeEcHHHHHHHH
Confidence 5678999999999999999999886
No 220
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=81.13 E-value=0.85 Score=32.39 Aligned_cols=25 Identities=12% Similarity=0.298 Sum_probs=22.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+..|+|+||.||..|+..++
T Consensus 16 l~~~F~~~D~d~dG~i~~~El~~~l 40 (186)
T 2hps_A 16 MKTRMQRVDVTGDGFISREDYELIA 40 (186)
T ss_dssp HHHHHHTTCTTCSSEEEHHHHHHHH
T ss_pred HHHHhhhcCCCCCCccCHHHHHHHH
Confidence 4678999999999999999999987
No 221
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=81.12 E-value=0.77 Score=32.66 Aligned_cols=26 Identities=15% Similarity=0.253 Sum_probs=23.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++..|+..|+|+||.||..|+..++.
T Consensus 42 l~~~F~~~D~d~~G~i~~~e~~~~l~ 67 (191)
T 3khe_A 42 LTQIFRQLDNNGDGQLDRKELIEGYR 67 (191)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCcHHHHHHHHH
Confidence 46789999999999999999999863
No 222
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=81.11 E-value=2.3 Score=29.75 Aligned_cols=21 Identities=14% Similarity=0.159 Sum_probs=10.2
Q ss_pred HhhccCCCCCCcccHHHHHHh
Q psy4160 10 FLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 10 Ff~~CD~~~D~~is~~EW~~C 30 (160)
.|+..|.++||.||..|+...
T Consensus 75 ~F~~~D~d~~G~i~~~el~~~ 95 (165)
T 1k94_A 75 NFMTVDQDGSGTVEHHELRQA 95 (165)
T ss_dssp HHHHHCTTCCSBCCHHHHHHH
T ss_pred HHHHhCCCCCceECHHHHHHH
Confidence 344445555555555554444
No 223
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=81.08 E-value=0.74 Score=31.62 Aligned_cols=25 Identities=24% Similarity=0.276 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+.+|+++||.||..|+...+
T Consensus 22 l~~~F~~~D~d~~G~i~~~e~~~~l 46 (162)
T 1top_A 22 FKAAFDMFDADGGGDISTKELGTVM 46 (162)
T ss_dssp HHHHHHTTTCSCSSEEEGGGHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 4567899999999999999999886
No 224
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=81.06 E-value=0.99 Score=32.80 Aligned_cols=28 Identities=18% Similarity=0.326 Sum_probs=24.5
Q ss_pred cchhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 5 HCIAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 5 ~C~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
.-+...|+.+|+|+||.||..||...+.
T Consensus 131 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 158 (198)
T 2r2i_A 131 EFTNMVFDKIDINGDGELSLEEFMEGVQ 158 (198)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 3467889999999999999999999764
No 225
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=81.04 E-value=1.4 Score=29.73 Aligned_cols=25 Identities=12% Similarity=0.170 Sum_probs=19.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+...+
T Consensus 81 ~~~~F~~~D~d~~G~i~~~el~~~l 105 (142)
T 2bl0_C 81 LRQAFRTFDPEGTGYIPKAALQDAL 105 (142)
T ss_dssp HHHHHHHTCCSSCSCEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4567888888888888888887764
No 226
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=81.04 E-value=0.87 Score=31.84 Aligned_cols=25 Identities=12% Similarity=0.211 Sum_probs=22.6
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+..++
T Consensus 27 l~~~F~~~D~d~~G~i~~~el~~~l 51 (166)
T 2mys_B 27 FKEAFTVIDQNADGIIDKDDLRETF 51 (166)
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 4678999999999999999999886
No 227
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=81.04 E-value=0.78 Score=32.10 Aligned_cols=25 Identities=16% Similarity=0.191 Sum_probs=22.2
Q ss_pred hhHHhhcc-CCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKC-DADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~C-D~~~D~~is~~EW~~C~ 31 (160)
++..|+.. |+|+||.||..|+..++
T Consensus 10 l~~~F~~~~D~d~dG~i~~~E~~~~l 35 (185)
T 2sas_A 10 IKFTFDFFLDMNHDGSIQDNDFEDMM 35 (185)
T ss_dssp HHHHHHHHTCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHheeCCCCCeEcHHHHHHHH
Confidence 46789999 99999999999998774
No 228
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=81.00 E-value=1 Score=30.29 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|...++
T Consensus 34 l~~~F~~~D~d~~G~I~~~el~~~l 58 (107)
T 2d58_A 34 FKEKYMEFDLNGNGDIDIMSLKRML 58 (107)
T ss_dssp HHHHHTTSCCCTTSCEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4567999999999999999999885
No 229
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=80.94 E-value=6.8 Score=29.68 Aligned_cols=96 Identities=15% Similarity=0.195 Sum_probs=59.2
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCC-----------------------------cccccccccc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDIT-----------------------------KVPDFNKMYE 92 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~-----------------------------~Vpdfn~mye 92 (160)
.+||-|+..|-|.|..+=..|.+++++.+.- ..+..|+++ .-....+.|.
T Consensus 61 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~ 140 (218)
T 3u5r_E 61 ALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYG 140 (218)
T ss_dssp EEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHT
T ss_pred eEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcC
Confidence 3689999999999999999999999987653 666777773 1233444555
Q ss_pred ccccceeeeee-eCceeEEecCCCCCcee-eeecCChhHHHHHHHHHhhc
Q psy4160 93 LYDPCTCMFFF-RNKHIMIDLGTGNNNKI-NWALEDKQEMIDIVETVYRG 140 (160)
Q Consensus 93 L~dP~tvmFFf-rnkHm~vD~GTgnnnKi-n~~~~~kqe~iDiie~iyrg 140 (160)
+.--.++ |++ ++..|. --|..+...- .-.-.+.+++...|+.+-.|
T Consensus 141 v~~~P~~-~liD~~G~i~-~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 141 AACTPDF-FLYDRERRLV-YHGQFDDARPGNGKDVTGADLRAAVDAVLKG 188 (218)
T ss_dssp CCEESEE-EEECTTCBEE-EEECSSSCCTTSCCCCCCHHHHHHHHHHHTT
T ss_pred CCCCCeE-EEECCCCcEE-EeccccccccccccccCHHHHHHHHHHHHcC
Confidence 5332343 555 344443 3333332210 01123468899999988665
No 230
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=80.87 E-value=0.79 Score=31.44 Aligned_cols=26 Identities=15% Similarity=0.272 Sum_probs=22.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++..|+.+|.++||.||..|+..++.
T Consensus 25 l~~~F~~~D~~~~G~i~~~e~~~~l~ 50 (161)
T 3fwb_A 25 IYEAFSLFDMNNDGFLDYHELKVAMK 50 (161)
T ss_dssp HHHHHHHHCTTSSSEECHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 46789999999999999999988753
No 231
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=80.64 E-value=0.78 Score=31.02 Aligned_cols=25 Identities=16% Similarity=0.193 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+...+
T Consensus 8 l~~~F~~~D~d~~G~i~~~el~~~l 32 (142)
T 2bl0_C 8 FKEAFELFDSERTGFITKEGLQTVL 32 (142)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4678999999999999999999875
No 232
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=80.57 E-value=0.4 Score=32.44 Aligned_cols=25 Identities=20% Similarity=0.503 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+..++
T Consensus 13 l~~~F~~~D~d~~G~i~~~el~~~l 37 (153)
T 3ox6_A 13 LREAFREFDKDKDGYINCRDLGNCM 37 (153)
T ss_dssp HHHHHHHHHHHCSSSCCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4677999999999999999999875
No 233
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=80.44 E-value=1.1 Score=32.91 Aligned_cols=25 Identities=16% Similarity=0.143 Sum_probs=22.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+..|+|+||.||..|+..++
T Consensus 38 l~~~F~~~D~d~~G~i~~~El~~~l 62 (208)
T 2hpk_A 38 LYKRFDTFDLDSDGKMEMDEVLYWP 62 (208)
T ss_dssp HHHHHHHHCTTCSSEECHHHHTHHH
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 4678999999999999999999987
No 234
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=80.21 E-value=1 Score=31.21 Aligned_cols=26 Identities=31% Similarity=0.404 Sum_probs=22.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++..|+..|+++||.||..|+...+.
T Consensus 29 l~~~F~~~D~~~~G~i~~~e~~~~l~ 54 (166)
T 2aao_A 29 LKEMFNMIDADKSGQITFEELKAGLK 54 (166)
T ss_dssp HHHHHHHHCTTCCSSBCHHHHHHHGG
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 35679999999999999999988753
No 235
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=80.08 E-value=1.3 Score=30.94 Aligned_cols=28 Identities=21% Similarity=0.396 Sum_probs=24.4
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhh
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKV 70 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kv 70 (160)
..||-|+-.|-|.|.++-..|.+++++.
T Consensus 40 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~ 67 (164)
T 2h30_A 40 PTLIKFWASWCPLCLSELGQAEKWAQDA 67 (164)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHTCG
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 3589999999999999999999988863
No 236
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=80.02 E-value=0.97 Score=31.05 Aligned_cols=25 Identities=32% Similarity=0.444 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+...+
T Consensus 100 ~~~~F~~~D~d~~G~i~~~E~~~~l 124 (166)
T 3akb_A 100 LHAALGVADTDGDGAVTVADTARAL 124 (166)
T ss_dssp HHHHHHHHCSSSSSCCBHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 5678899999999999999998874
No 237
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=79.96 E-value=1 Score=33.19 Aligned_cols=26 Identities=23% Similarity=0.368 Sum_probs=23.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++..|+..|+++||.||..|+..++.
T Consensus 12 l~~~F~~~D~d~dG~I~~~E~~~~l~ 37 (188)
T 1s6i_A 12 LKELFKMIDTDNSGTITFDELKDGLK 37 (188)
T ss_dssp HHHHHHTTSSSSSSCEEHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 56789999999999999999998864
No 238
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=79.90 E-value=1.4 Score=33.43 Aligned_cols=31 Identities=23% Similarity=0.484 Sum_probs=25.7
Q ss_pred cchhHHhhccCCCCCCcccHHHHHHhhcCCh
Q psy4160 5 HCIAPFLNKCDADDDHLITLKEWARCLELNE 35 (160)
Q Consensus 5 ~C~~~Ff~~CD~~~D~~is~~EW~~C~~L~e 35 (160)
.-+..+|+..|.|+||.||..||...+.-.+
T Consensus 173 ~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~ 203 (224)
T 1s1e_A 173 QHVDVFFQKMDKNKDGIVTLDEFLESCQEDD 203 (224)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHTCH
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHhCH
Confidence 3467899999999999999999999864433
No 239
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=79.86 E-value=0.84 Score=32.34 Aligned_cols=28 Identities=18% Similarity=0.274 Sum_probs=24.5
Q ss_pred cchhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 5 HCIAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 5 ~C~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
.=++..|+..|+++||.||..|+..++.
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~ 34 (172)
T 2znd_A 7 SFLWNVFQRVDKDRSGVISDTELQQALS 34 (172)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHCC
T ss_pred hHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 3467889999999999999999999864
No 240
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=79.81 E-value=1 Score=30.34 Aligned_cols=26 Identities=15% Similarity=0.183 Sum_probs=23.5
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
=++..|+..|+|+||.||..|....+
T Consensus 21 ~~~~~F~~~D~d~dG~I~~~El~~~l 46 (103)
T 1snl_A 21 NPKTFFILHDINSDGVLDEQELEALF 46 (103)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHH
T ss_pred CHHHHHHHHcCCCCCcccHHHHHHHH
Confidence 46788999999999999999999875
No 241
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=79.75 E-value=1.7 Score=32.07 Aligned_cols=64 Identities=9% Similarity=0.064 Sum_probs=46.8
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCcccc----cccccccc-ccceeeeeeeCceeEE
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPD----FNKMYELY-DPCTCMFFFRNKHIMI 110 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpd----fn~myeL~-dP~tvmFFfrnkHm~v 110 (160)
++|-|--.|=++|..+-..+.+.+++ .=+.+|.||+++.++ --+-|.+. .-+|++ +|+|.-+.-
T Consensus 27 vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~i-l~k~G~~v~ 95 (112)
T 3iv4_A 27 VFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAF-YFVNGEMVW 95 (112)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEE-EEETTEEEE
T ss_pred EEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCCeEE-EEECCEEEE
Confidence 35555566999999999999999985 457779999999877 56777776 346654 446654443
No 242
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=79.70 E-value=2.6 Score=30.61 Aligned_cols=25 Identities=12% Similarity=0.111 Sum_probs=21.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 113 l~~~F~~~D~d~~G~I~~~E~~~~l 137 (207)
T 2ehb_A 113 VKFAFKLYDLRQTGFIEREELKEMV 137 (207)
T ss_dssp HHHHHHHHCTTCCSSEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4567899999999999999998765
No 243
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=79.63 E-value=1.2 Score=32.60 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=24.4
Q ss_pred ccchhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 4 EHCIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 4 E~C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+.=++..|+..|+|+||.||..|+...+
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l 53 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGAISVPELNAAL 53 (191)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHH
Confidence 4456788999999999999999999987
No 244
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=79.60 E-value=0.91 Score=32.49 Aligned_cols=23 Identities=22% Similarity=0.501 Sum_probs=20.2
Q ss_pred HhhccCCCCCCcccHHHHHHhhc
Q psy4160 10 FLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 10 Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
+|+.+|+|+||.||..||..++.
T Consensus 69 ~~~~~D~d~dG~i~~~Ef~~~~~ 91 (191)
T 2ccm_A 69 LRKYADENEDEQVTKEEWLKMWA 91 (191)
T ss_dssp HHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHhcCCCCCCeECHHHHHHHHH
Confidence 34999999999999999998763
No 245
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=79.46 E-value=1.6 Score=31.27 Aligned_cols=25 Identities=16% Similarity=0.256 Sum_probs=22.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.|+||.||..|+...+
T Consensus 70 l~~~F~~~D~d~dG~I~~~El~~~l 94 (143)
T 3a4u_B 70 QLHYFKMHDYDGNNLLDGLELSTAI 94 (143)
T ss_dssp HHHHHHHTCTTCSSCEEHHHHHHTC
T ss_pred HHHHHHHhCCCCCCccCHHHHHHHH
Confidence 4556999999999999999999875
No 246
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=79.35 E-value=0.93 Score=33.08 Aligned_cols=26 Identities=19% Similarity=0.454 Sum_probs=22.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++.+|+..|.|+||.||..||...+.
T Consensus 157 ~~~~f~~~D~d~dG~I~~~Ef~~~~~ 182 (207)
T 2ehb_A 157 VDKAFVQADRKNDGKIDIDEWKDFVS 182 (207)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 46788999999999999999999753
No 247
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=79.33 E-value=1.1 Score=31.64 Aligned_cols=25 Identities=28% Similarity=0.312 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+..++
T Consensus 13 l~~~F~~~D~d~~G~i~~~e~~~~l 37 (179)
T 2f2o_A 13 FKEAFSLFDKDGDGTITTKELGTVM 37 (179)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4577899999999999999999886
No 248
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=79.33 E-value=1.1 Score=29.50 Aligned_cols=25 Identities=16% Similarity=0.189 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+..++
T Consensus 26 l~~~F~~~D~d~~G~i~~~el~~~l 50 (105)
T 1wlz_A 26 ITQEFENFDTMKTNTISREEFRAIC 50 (105)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4667999999999999999999885
No 249
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=79.31 E-value=1 Score=32.65 Aligned_cols=24 Identities=17% Similarity=0.283 Sum_probs=21.5
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+.-|+..|+|+||.||..|...++
T Consensus 19 k~~F~~~D~d~dG~I~~~El~~~l 42 (153)
T 3i5g_B 19 KEAFTMIDQDRDGFIGMEDLKDMF 42 (153)
T ss_dssp HHHHHHHCCSTTSCCCHHHHHHHH
T ss_pred HHHHHHHCCCCCCeEcHHHHHHHH
Confidence 456999999999999999998885
No 250
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=79.17 E-value=1 Score=29.74 Aligned_cols=25 Identities=24% Similarity=0.251 Sum_probs=21.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 44 l~~~F~~~D~d~~G~i~~~el~~~l 68 (109)
T 3fs7_A 44 IKKVFGILDQDKSGFIEEEELQLFL 68 (109)
T ss_dssp HHHHHHHHSTTCSSSBCHHHHHTTG
T ss_pred HHHHHHHHCCCCCCeEeHHHHHHHH
Confidence 5667999999999999999998875
No 251
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=79.08 E-value=1 Score=30.29 Aligned_cols=25 Identities=4% Similarity=0.311 Sum_probs=22.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+..|.++||.||..||...+
T Consensus 70 ~~~l~~~~D~d~dg~i~~~eF~~~~ 94 (107)
T 2d58_A 70 LKKLIGEVSSGSGETFSYPDFLRMM 94 (107)
T ss_dssp HHHHHHHHCSSSSSEECHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 4568899999999999999999874
No 252
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=78.91 E-value=0.65 Score=29.18 Aligned_cols=24 Identities=17% Similarity=0.394 Sum_probs=21.1
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
...|+.+|.++||.||..||...+
T Consensus 48 ~~~~~~~D~~~dg~i~~~eF~~~~ 71 (81)
T 1c7v_A 48 EEAMKEADEDGNGVIDIPEFMDLI 71 (81)
T ss_dssp HHHHHHHCSSGGGSEEHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHH
Confidence 457889999999999999999875
No 253
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=78.74 E-value=12 Score=25.71 Aligned_cols=39 Identities=10% Similarity=0.004 Sum_probs=28.7
Q ss_pred hhhhhccCCCChhhhhh-HHHHHHHHHhhhc-ceEEEEEeC
Q psy4160 43 EDVIRFGHDWDPTCMKM-DEVLYSIAEKVKN-FAVIYLVDI 81 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~m-DevL~kia~kvkn-favIYlvDi 81 (160)
.+||-|+-.|-|.|.++ =..|.+++++.+. =..++.|++
T Consensus 30 ~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~ 70 (158)
T 3eyt_A 30 VIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHT 70 (158)
T ss_dssp EEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEEC
T ss_pred EEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEe
Confidence 35788999999999995 7889999988762 234444443
No 254
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=78.73 E-value=0.57 Score=35.29 Aligned_cols=25 Identities=20% Similarity=0.473 Sum_probs=19.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+..|.|+||.||..|+...+
T Consensus 132 l~~~F~~~D~d~~G~Is~~El~~~l 156 (219)
T 3cs1_A 132 LTVMFDEIDASGNMLVDEEEFKRAV 156 (219)
T ss_dssp HHHHHHTTCSSSSSEEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4566788888888888888877766
No 255
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=78.67 E-value=1.1 Score=28.75 Aligned_cols=25 Identities=16% Similarity=0.278 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|....+
T Consensus 11 l~~~F~~~D~d~~G~i~~~el~~~l 35 (92)
T 2kn2_A 11 LKEAFKVFDKDQNGYISASELRHVM 35 (92)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHHCCCCCCeEcHHHHHHHH
Confidence 4678999999999999999998874
No 256
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=78.55 E-value=0.39 Score=33.89 Aligned_cols=30 Identities=7% Similarity=0.069 Sum_probs=3.9
Q ss_pred cccchhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 3 LEHCIAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 3 ~E~C~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
|||-.+..|+..|+++||.||..||...+.
T Consensus 1 ~~p~~~~l~~~~D~d~~G~I~~~EF~~~~~ 30 (135)
T 3h4s_E 1 MEPTEKSMLLETTSTTKMETKYEDMLPVMA 30 (135)
T ss_dssp ------------------CCCC--------
T ss_pred CChhHHHHHHHHcCCCCCcEeHHHHHHHHH
Confidence 577888999999999999999999987653
No 257
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=78.39 E-value=1.3 Score=28.11 Aligned_cols=25 Identities=8% Similarity=0.203 Sum_probs=21.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++.-|+..|.++||.||..|...++
T Consensus 16 l~~~F~~~D~d~~G~I~~~el~~~l 40 (86)
T 1j7q_A 16 CMKIFDIFDRNAENIAPVSDTMDML 40 (86)
T ss_dssp HHHHHHHHSTTTTSCBCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 3567899999999999999998875
No 258
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=78.31 E-value=1.2 Score=30.47 Aligned_cols=25 Identities=24% Similarity=0.389 Sum_probs=21.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 98 ~~~~F~~~D~d~~G~I~~~e~~~~l 122 (162)
T 1top_A 98 LANCFRIFDKNADGFIDIEELGEIL 122 (162)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4567999999999999999998875
No 259
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=78.20 E-value=3.9 Score=30.38 Aligned_cols=25 Identities=24% Similarity=0.283 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 105 l~~~F~~~D~d~~G~i~~~el~~~l 129 (263)
T 2f33_A 105 FMKTWRKYDTDHSGFIETEELKNFL 129 (263)
T ss_dssp HHHHHTTSSTTTCSSBCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCHHHHHHHH
Confidence 4578999999999999999999875
No 260
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=78.18 E-value=1.2 Score=30.99 Aligned_cols=23 Identities=9% Similarity=0.297 Sum_probs=21.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHH
Q psy4160 7 IAPFLNKCDADDDHLITLKEWAR 29 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~ 29 (160)
++..|+.+|+|+||.||..|+..
T Consensus 9 l~~~F~~~D~d~~G~i~~~el~~ 31 (176)
T 1nya_A 9 LKKRFDRWDFDGNGALERADFEK 31 (176)
T ss_dssp HHHHHHHCCSSCCSSBCSHHHHH
T ss_pred HHHHHHHHcCCCCCcccHHHHHH
Confidence 56789999999999999999988
No 261
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=77.98 E-value=1.9 Score=30.10 Aligned_cols=26 Identities=15% Similarity=0.029 Sum_probs=22.6
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
.+..|+..|.|+||.||..|....+.
T Consensus 16 l~~~F~~~D~d~dG~I~~~El~~~l~ 41 (111)
T 2kgr_A 16 YRQLFNSHDKTMSGHLTGPQARTILM 41 (111)
T ss_dssp HHHHHHTTSCSSCCEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 35679999999999999999998764
No 262
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=77.97 E-value=1.1 Score=32.25 Aligned_cols=25 Identities=28% Similarity=0.542 Sum_probs=22.8
Q ss_pred hhHHhhccCC-CCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDA-DDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~-~~D~~is~~EW~~C~ 31 (160)
+..+|+..|. |+||.||..|+...+
T Consensus 154 ~~~~~~~~D~~d~dg~Is~~EF~~~~ 179 (204)
T 3e3r_A 154 LRRFLDNFDSSEKDGQVTLAEFQDYY 179 (204)
T ss_dssp HHHHHHHHSCSSCCSCEEHHHHHHHH
T ss_pred HHHHHHHhhccCCCCcCcHHHHHHHH
Confidence 5789999998 999999999999974
No 263
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=77.94 E-value=1.2 Score=33.86 Aligned_cols=25 Identities=16% Similarity=0.353 Sum_probs=17.7
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+..+|+..|.|+||.||..||...+
T Consensus 172 ~~~~~~~~D~d~dG~Is~~EF~~~~ 196 (226)
T 2lvv_A 172 ATTVFNEIDTNGSGVVTFDEFSCWA 196 (226)
T ss_dssp CHHHHHHHCCSCSSCEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 4566777777777777777777664
No 264
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=77.90 E-value=1.1 Score=30.83 Aligned_cols=25 Identities=28% Similarity=0.296 Sum_probs=21.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+++||.||..|+..++
T Consensus 12 l~~~F~~~D~d~~G~i~~~el~~~l 36 (148)
T 1exr_A 12 FKEAFALFDKDGDGTITTKELGTVM 36 (148)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 3567899999999999999999875
No 265
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=77.85 E-value=1.3 Score=30.11 Aligned_cols=26 Identities=15% Similarity=0.353 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
+...|+.+|.++||.||..||..++.
T Consensus 40 ~~~~~~~~D~~~~g~i~~~ef~~~~~ 65 (155)
T 3ll8_B 40 VQRVIDIFDTDGNGEVDFKEFIEGVS 65 (155)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHG
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 46788999999999999999988764
No 266
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=77.82 E-value=8.2 Score=28.61 Aligned_cols=41 Identities=10% Similarity=0.013 Sum_probs=32.0
Q ss_pred hhhhhcc-CCCChhhhhhHHHHHHHHHhhhc-ceEEEEEeCCc
Q psy4160 43 EDVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFG-rd~dp~Cm~mDevL~kia~kvkn-favIYlvDi~~ 83 (160)
-.||-|. ..|-|.|..+=..|.+++++.+. -+.++.|++++
T Consensus 38 ~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~ 80 (202)
T 1uul_A 38 WLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDS 80 (202)
T ss_dssp EEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSC
T ss_pred eEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3689999 88999999988888888887753 35667777764
No 267
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=77.78 E-value=1.1 Score=29.49 Aligned_cols=25 Identities=20% Similarity=0.270 Sum_probs=21.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|....+
T Consensus 43 l~~~F~~~D~d~~G~I~~~el~~~l 67 (109)
T 1rwy_A 43 VKKVFHILDKDKSGFIEEDELGSIL 67 (109)
T ss_dssp HHHHHHHHSTTCSSEECHHHHHTHH
T ss_pred HHHHHHHHCCCCCCeEcHHHHHHHH
Confidence 4567999999999999999998875
No 268
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=77.73 E-value=1.3 Score=29.22 Aligned_cols=25 Identities=20% Similarity=0.182 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|....+
T Consensus 43 l~~~F~~~D~d~~G~I~~~el~~~l 67 (108)
T 2pvb_A 43 VKKAFYVIDQDKSGFIEEDELKLFL 67 (108)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHTGG
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 4567999999999999999999875
No 269
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=77.63 E-value=1.4 Score=29.31 Aligned_cols=26 Identities=19% Similarity=0.190 Sum_probs=22.8
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
=++..|+..|.++||.||..|....+
T Consensus 30 ~l~~~F~~~D~d~~G~I~~~El~~~l 55 (94)
T 2kz2_A 30 EIREAFRVEDKDGNGYISAAELRHVM 55 (94)
T ss_dssp HHHHHHHHHCTTCCSCBCHHHHHHHH
T ss_pred HHHHHHHHHCCCCcCcCCHHHHHHHH
Confidence 35678999999999999999998874
No 270
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=77.61 E-value=1.3 Score=30.85 Aligned_cols=27 Identities=26% Similarity=0.458 Sum_probs=23.5
Q ss_pred cchhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 5 HCIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 5 ~C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.-++..|+..|+++||.||..|+...+
T Consensus 102 ~~~~~~F~~~D~d~~G~I~~~e~~~~l 128 (176)
T 1nya_A 102 PVVKGIVGMCDKNADGQINADEFAAWL 128 (176)
T ss_dssp HHHHHHHHHTCSSCCSEEEHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 346788999999999999999998874
No 271
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=77.61 E-value=1.2 Score=32.16 Aligned_cols=26 Identities=23% Similarity=0.433 Sum_probs=22.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++..|+..|+|+||.||..|+..++.
T Consensus 39 l~~~F~~~D~d~~G~i~~~e~~~~l~ 64 (204)
T 3e3r_A 39 LARFFRQLDRDGSRSLDADEFRQGLA 64 (204)
T ss_dssp -CHHHHHHCTTCCSSBCHHHHHHHHH
T ss_pred HHHHHHHHccCCCCCcCHHHHHHHHH
Confidence 46789999999999999999998863
No 272
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=77.60 E-value=1.5 Score=30.87 Aligned_cols=26 Identities=19% Similarity=0.172 Sum_probs=22.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++.-|+.+|.++||.||..|+...+.
T Consensus 42 l~~~F~~~D~d~~G~I~~~el~~~l~ 67 (135)
T 3h4s_E 42 LCKGFSLLADPERHLITAESLRRNSG 67 (135)
T ss_dssp HHHHHHHHSBTTTTBBCHHHHHHHGG
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 56678999999999999999988764
No 273
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=77.59 E-value=1.5 Score=32.39 Aligned_cols=24 Identities=21% Similarity=0.236 Sum_probs=21.2
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+.-|+..|+|+||.||..|+..++
T Consensus 14 k~~F~~~D~d~dG~I~~~El~~~l 37 (176)
T 2lhi_A 14 KEAFALFDKDNNGSISSSELATVM 37 (176)
T ss_dssp HHHHHTTCSSCSSCBCHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHH
Confidence 445899999999999999999875
No 274
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=77.36 E-value=1.1 Score=31.68 Aligned_cols=22 Identities=23% Similarity=0.270 Sum_probs=20.4
Q ss_pred hhHHhhccCCCCCCcccHHHHH
Q psy4160 7 IAPFLNKCDADDDHLITLKEWA 28 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~ 28 (160)
.+..|+..|+|+||.||..|+.
T Consensus 18 l~~~F~~~D~d~~G~i~~~El~ 39 (191)
T 1uhk_A 18 HKHMFNFLDVNHNGKISLDEMV 39 (191)
T ss_dssp HHHHHHHHCTTCCSEEEHHHHH
T ss_pred HHHHHhhccCCCCCcCcHHHHH
Confidence 5678999999999999999998
No 275
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=77.31 E-value=1.7 Score=32.54 Aligned_cols=25 Identities=8% Similarity=0.056 Sum_probs=21.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.|+||.||..|+..-+
T Consensus 198 ~~~~F~~~D~d~~G~Is~~E~~~~l 222 (272)
T 2be4_A 198 FEKIFAHYDVSRTGALEGPEVDGFV 222 (272)
T ss_dssp HHHHHHHHCTTCCSEEETHHHHHHH
T ss_pred HHHHHHHhCCCCCCeecHHHHHHHH
Confidence 5678999999999999999977654
No 276
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=77.24 E-value=2 Score=31.55 Aligned_cols=25 Identities=20% Similarity=0.214 Sum_probs=22.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+..|+++||.||..|+...+
T Consensus 54 l~~~F~~~D~d~~G~i~~~El~~~l 78 (191)
T 3k21_A 54 LKSTFLVLDEDGKGYITKEQLKKGL 78 (191)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCcHHHHHHHH
Confidence 4567899999999999999999886
No 277
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=77.11 E-value=1.2 Score=31.23 Aligned_cols=25 Identities=28% Similarity=0.417 Sum_probs=22.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+.+|.|+||.||..||...+
T Consensus 50 ~~~i~~~~D~d~dG~I~~~EF~~~~ 74 (111)
T 2kgr_A 50 LASIWNLSDIDQDGKLTAEEFILAM 74 (111)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCcHHHHHHHH
Confidence 4568899999999999999998874
No 278
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=76.90 E-value=1.2 Score=29.71 Aligned_cols=25 Identities=24% Similarity=0.436 Sum_probs=21.7
Q ss_pred chhHHhhccCCCCCCcccHHHHHHh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
=+...|+..|+|+||.|+..||...
T Consensus 51 ~i~~~~~~~D~d~dG~I~f~EF~~~ 75 (92)
T 2kax_A 51 SIDDLMKSLDKNSDQEIDFKEYSVF 75 (92)
T ss_dssp THHHHHHHHTTTCSSEEEHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 3567899999999999999999875
No 279
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=76.83 E-value=1.9 Score=29.38 Aligned_cols=25 Identities=12% Similarity=0.037 Sum_probs=22.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 89 l~~~F~~~D~d~~G~I~~~el~~~l 113 (151)
T 1w7j_B 89 YLEGFRVFDKEGNGKVMGAELRHVL 113 (151)
T ss_dssp CHHHHHTTCTTSSSEEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4568999999999999999998875
No 280
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=76.70 E-value=1.4 Score=29.30 Aligned_cols=25 Identities=8% Similarity=-0.000 Sum_probs=21.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+.-|+..|.|+||.||..|-...+
T Consensus 11 ~~~~F~~~D~d~dG~I~~~el~~~l 35 (92)
T 1fi6_A 11 YVNQFKTIQPDLNGFIPGSAAKEFF 35 (92)
T ss_dssp HHHHHTTTCCSTTCEEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 3557999999999999999988874
No 281
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=76.66 E-value=1.5 Score=29.84 Aligned_cols=26 Identities=23% Similarity=0.169 Sum_probs=22.9
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
-.+..|+..|.++||.||..|+...+
T Consensus 76 ~~~~~F~~~D~d~~G~i~~~e~~~~l 101 (155)
T 3ll8_B 76 KLRFAFRIYDMDKDGYISNGELFQVL 101 (155)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 35678999999999999999998875
No 282
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=76.57 E-value=1.1 Score=30.76 Aligned_cols=25 Identities=24% Similarity=0.364 Sum_probs=21.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 97 ~~~~F~~~D~d~~G~i~~~El~~~l 121 (161)
T 1dtl_A 97 LSDLFRMFDKNADGYIDLEELKIML 121 (161)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHGGGG
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4667889999999999999998875
No 283
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=78.25 E-value=0.52 Score=32.09 Aligned_cols=42 Identities=17% Similarity=0.263 Sum_probs=31.5
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhh---cceEEEEEeCCcc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVK---NFAVIYLVDITKV 84 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvk---nfavIYlvDi~~V 84 (160)
..+|-|+..|-|.|.++-..|.+++++.+ +-..++.|++++-
T Consensus 28 ~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~ 72 (143)
T 2lus_A 28 IIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRS 72 (143)
Confidence 46899999999999999999999888762 2234455666543
No 284
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=76.48 E-value=1.2 Score=30.61 Aligned_cols=25 Identities=16% Similarity=0.177 Sum_probs=22.5
Q ss_pred hhHHhhccCCCC-CCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADD-DHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~-D~~is~~EW~~C~ 31 (160)
++..|+..|+++ ||.||..|+..++
T Consensus 20 l~~~F~~~D~~~~~G~i~~~e~~~~l 45 (161)
T 1dtl_A 20 FKAAFDIFVLGAEDGSISTKELGKVM 45 (161)
T ss_dssp HHHHHHHHTTTCGGGSBCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence 467789999999 9999999999986
No 285
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=76.36 E-value=1.3 Score=31.29 Aligned_cols=25 Identities=12% Similarity=0.199 Sum_probs=20.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+..|+|+||.||..||...+
T Consensus 112 ~~~~~~~~d~~~dg~i~~~eF~~~~ 136 (172)
T 2znd_A 112 HDILIRKFDRQGRGQIAFDDFIQGC 136 (172)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4567888899999999999998874
No 286
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=76.24 E-value=6.8 Score=28.40 Aligned_cols=35 Identities=26% Similarity=0.495 Sum_probs=27.5
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeC
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDI 81 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi 81 (160)
+||-|+-.|-|.|.++-..|.+++++ ++ .++.|++
T Consensus 61 vll~F~a~~C~~C~~~~~~l~~l~~~--~v-~vv~vs~ 95 (176)
T 3kh7_A 61 ALVNVWGTWCPSCRVEHPELTRLAEQ--GV-VIYGINY 95 (176)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHT--TC-EEEEEEE
T ss_pred EEEEEECCcCHHHHHHHHHHHHHHHC--CC-EEEEEeC
Confidence 58899999999999998889998886 44 4444553
No 287
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=76.22 E-value=0.93 Score=31.19 Aligned_cols=27 Identities=19% Similarity=0.373 Sum_probs=23.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhcC
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLEL 33 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~L 33 (160)
+...++.+|.|+||.|+..||...+.+
T Consensus 47 l~~i~~~~D~d~dG~i~~~EF~~~~~~ 73 (99)
T 1qjt_A 47 LGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp HHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 567889999999999999999997643
No 288
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=76.16 E-value=1.5 Score=28.87 Aligned_cols=25 Identities=24% Similarity=0.291 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|....+
T Consensus 44 l~~~F~~~D~d~~G~I~~~el~~~l 68 (110)
T 1pva_A 44 VKKVFKAIDADASGFIEEEELKFVL 68 (110)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHTGG
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4567999999999999999999875
No 289
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=75.97 E-value=1.8 Score=32.39 Aligned_cols=25 Identities=28% Similarity=0.320 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+|+||.||..|+...+
T Consensus 13 l~~~F~~~D~d~~G~i~~~El~~~l 37 (272)
T 2be4_A 13 FLQIWQHFDADDNGYIEGKELDDFF 37 (272)
T ss_dssp HHHHHHHHCTTCCSEEEGGGHHHHH
T ss_pred HHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 4678999999999999999999875
No 290
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=75.95 E-value=1.5 Score=32.04 Aligned_cols=25 Identities=8% Similarity=0.234 Sum_probs=20.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+..|+|+||.||..||...+
T Consensus 131 ~~~~~~~~D~d~dg~i~~~eF~~~~ 155 (191)
T 1y1x_A 131 FQALMRKFDRQRRGSLGFDDYVELS 155 (191)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHH
Confidence 4567888899999999999988874
No 291
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=75.93 E-value=1.9 Score=29.45 Aligned_cols=25 Identities=24% Similarity=0.279 Sum_probs=15.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 98 ~~~~F~~~D~d~~G~i~~~el~~~l 122 (161)
T 3fwb_A 98 IKRAFQLFDDDHTGKISIKNLRRVA 122 (161)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHHcCCCCCeEeHHHHHHHH
Confidence 3445666666666666666666653
No 292
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=75.92 E-value=1.3 Score=28.01 Aligned_cols=25 Identities=24% Similarity=0.367 Sum_probs=22.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+..|.++||.||..|....+
T Consensus 25 ~~~~F~~~D~d~~G~i~~~el~~~l 49 (87)
T 1s6j_A 25 LKELFKMIDTDNSGTITFDELKDGL 49 (87)
T ss_dssp TTTHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4677999999999999999999875
No 293
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=75.85 E-value=14 Score=26.03 Aligned_cols=40 Identities=18% Similarity=0.183 Sum_probs=32.4
Q ss_pred hhhhcc-CCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCCc
Q psy4160 44 DVIRFG-HDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITK 83 (160)
Q Consensus 44 ~viRFG-rd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~~ 83 (160)
+||-|+ -.|-|.|..+=..|.+++++.+.- ..++.|..+.
T Consensus 32 vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~ 73 (161)
T 3drn_A 32 IVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDD 73 (161)
T ss_dssp EEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCC
T ss_pred EEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 689999 889999999888899988887653 6667777763
No 294
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=75.81 E-value=3.3 Score=35.89 Aligned_cols=62 Identities=10% Similarity=-0.040 Sum_probs=51.0
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccccccccceeeeeeeCcee
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMYELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~myeL~dP~tvmFFfrnkHm 108 (160)
.|.-|...|=|.|..+-.+|.++|.+-. -..++.+|+++-|+.-+-|.+..=+|+ |++++++
T Consensus 120 ~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~~~~~~~~i~svPt~--~i~g~~~ 181 (521)
T 1hyu_A 120 EFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQNEITERNVMGVPAV--FVNGKEF 181 (521)
T ss_dssp EEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCSSSEE--EETTEEE
T ss_pred ceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhHHHHHHhCCCccCEE--EECCEEE
Confidence 3788999999999999999999998654 466678999999999998988665664 3388876
No 295
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=75.80 E-value=1.3 Score=29.79 Aligned_cols=26 Identities=15% Similarity=0.123 Sum_probs=22.9
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
-++..|+..|+++||.||..|+...+
T Consensus 77 ~l~~~F~~~D~d~~G~i~~~e~~~~l 102 (145)
T 2bl0_B 77 EMLDAFRALDKEGNGTIQEAELRQLL 102 (145)
T ss_dssp HHHHHHHHHCSSSSSEEEHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 35678999999999999999999875
No 296
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=75.79 E-value=1.3 Score=29.17 Aligned_cols=25 Identities=24% Similarity=0.171 Sum_probs=21.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 44 l~~~F~~~D~d~~G~I~~~el~~~l 68 (109)
T 1bu3_A 44 IKKAFFVIDQDKSGFIEEDELKLFL 68 (109)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHTHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4677899999999999999998874
No 297
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=75.77 E-value=2.7 Score=30.85 Aligned_cols=27 Identities=22% Similarity=0.208 Sum_probs=23.1
Q ss_pred cchhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 5 HCIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 5 ~C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.-++.-|+..|.|+||.||..|+...+
T Consensus 113 ~~l~~~F~~~D~d~dG~Is~~El~~~l 139 (208)
T 2ct9_A 113 NKLHFAFRLYDLDKDDKISRDELLQVL 139 (208)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCEEcHHHHHHHH
Confidence 345677999999999999999998875
No 298
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=75.60 E-value=1.3 Score=29.14 Aligned_cols=25 Identities=20% Similarity=0.274 Sum_probs=21.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+.+|.++||.||..|....+
T Consensus 43 l~~~F~~~D~d~~G~i~~~el~~~l 67 (109)
T 5pal_A 43 VKEVFEILDKDQSGFIEEEELKGVL 67 (109)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHTHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4567899999999999999988764
No 299
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=75.59 E-value=1.4 Score=31.31 Aligned_cols=22 Identities=23% Similarity=0.231 Sum_probs=20.2
Q ss_pred hhHHhhccCCCCCCcccHHHHH
Q psy4160 7 IAPFLNKCDADDDHLITLKEWA 28 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~ 28 (160)
.+..|+..|.|+||.||..|+.
T Consensus 22 l~~~F~~~D~d~~G~i~~~El~ 43 (195)
T 1qv0_A 22 HKHMFDFLDINGNGKITLDEIV 43 (195)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHH
T ss_pred HHHHHhHcCCCCCCcCcHHHHH
Confidence 4578999999999999999998
No 300
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=75.56 E-value=1.2 Score=29.35 Aligned_cols=25 Identities=16% Similarity=0.173 Sum_probs=22.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+..|.++||.||..|....+
T Consensus 43 l~~~F~~~D~d~~G~I~~~el~~~l 67 (108)
T 1rro_A 43 VKDIFRFIDNDQSGYLDGDELKYFL 67 (108)
T ss_dssp HHHHHHHHCTTCSSEECTHHHHTGG
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 4578999999999999999998875
No 301
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.52 E-value=2.1 Score=30.53 Aligned_cols=78 Identities=15% Similarity=0.238 Sum_probs=46.1
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCcc---cc----ccccccccccceeeeeeeCceeEEecCCCC
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKV---PD----FNKMYELYDPCTCMFFFRNKHIMIDLGTGN 116 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~V---pd----fn~myeL~dP~tvmFFfrnkHm~vD~GTgn 116 (160)
+++ |+.+|-|.|.++-.+|.+... .| ..+|+++. |+ +.+.|....-+++ |.+++++- .
T Consensus 29 vvv-f~~~~Cp~C~~~~~~L~~~~i---~~---~~vdid~~~~~~~~~~~l~~~~g~~~vP~l--~i~G~~ig------g 93 (130)
T 2cq9_A 29 VVI-FSKTSCSYCTMAKKLFHDMNV---NY---KVVELDLLEYGNQFQDALYKMTGERTVPRI--FVNGTFIG------G 93 (130)
T ss_dssp EEE-EECSSCSHHHHHHHHHHHHTC---CC---EEEETTTSTTHHHHHHHHHHHHSSCCSSEE--EETTEEEE------E
T ss_pred EEE-EEcCCChHHHHHHHHHHHcCC---Cc---EEEECcCCcCcHHHHHHHHHHhCCCCcCEE--EECCEEEc------C
Confidence 344 999999999999888887632 22 46788776 44 4455555444453 45665541 1
Q ss_pred CceeeeecCChhHHHHHHHHH
Q psy4160 117 NNKINWALEDKQEMIDIVETV 137 (160)
Q Consensus 117 nnKin~~~~~kqe~iDiie~i 137 (160)
..-+.. +..+.+|..+++.+
T Consensus 94 ~~~l~~-~~~~~~L~~~L~~~ 113 (130)
T 2cq9_A 94 ATDTHR-LHKEGKLLPLVHQC 113 (130)
T ss_dssp HHHHHH-HHHHTSSHHHHHHH
T ss_pred hHHHHH-HHHcCcHHHHHHHc
Confidence 011111 33456677777664
No 302
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=75.48 E-value=1.1 Score=29.92 Aligned_cols=25 Identities=24% Similarity=0.416 Sum_probs=22.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...++..|.|+||.||..||...+
T Consensus 45 ~~~i~~~~D~d~dG~i~~~EF~~~~ 69 (92)
T 1fi6_A 45 LSHIWELSDFDKDGALTLDEFCAAF 69 (92)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 4667889999999999999999875
No 303
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=75.47 E-value=15 Score=25.24 Aligned_cols=41 Identities=17% Similarity=0.275 Sum_probs=31.4
Q ss_pred hhhhhccCCCChh-hhhhHHHHHHHHHhhhc-----ceEEEEEeCCc
Q psy4160 43 EDVIRFGHDWDPT-CMKMDEVLYSIAEKVKN-----FAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFGrd~dp~-Cm~mDevL~kia~kvkn-----favIYlvDi~~ 83 (160)
.+||-|+-.|-|+ |..+=..|.+++++.+. =..+..|.++.
T Consensus 25 ~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~ 71 (164)
T 2ggt_A 25 WLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDP 71 (164)
T ss_dssp EEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCT
T ss_pred EEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCC
Confidence 3588999999997 99988889999887753 34556666654
No 304
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=75.47 E-value=0.84 Score=31.20 Aligned_cols=25 Identities=12% Similarity=0.093 Sum_probs=22.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+..|.++||.||..|+...+
T Consensus 12 l~~~F~~~D~d~~G~i~~~el~~~l 36 (151)
T 1w7j_B 12 FKEAFELFDRVGDGKILYSQCGDVM 36 (151)
T ss_dssp HHHHHHHHCCSSSSEEESTTHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4678999999999999999999875
No 305
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=75.42 E-value=1.4 Score=32.68 Aligned_cols=25 Identities=16% Similarity=0.203 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+..|+++||.||..|+..++
T Consensus 59 l~~~F~~~D~d~~G~Is~~El~~~l 83 (197)
T 3pm8_A 59 LRNIFIALDVDNSGTLSSQEILDGL 83 (197)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 3567999999999999999999986
No 306
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=75.32 E-value=1.7 Score=29.24 Aligned_cols=26 Identities=15% Similarity=0.224 Sum_probs=22.8
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
-++..|+..|.++||.||..|+...+
T Consensus 89 ~~~~~F~~~D~d~~G~i~~~el~~~l 114 (153)
T 3ox6_A 89 ELRDAFREFDTNGDGEISTSELREAM 114 (153)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 35678999999999999999998874
No 307
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=75.18 E-value=13 Score=25.43 Aligned_cols=39 Identities=10% Similarity=0.014 Sum_probs=29.6
Q ss_pred hhhhhccCCCChhhhh-hHHHHHHHHHhhhcc-eEEEEEeC
Q psy4160 43 EDVIRFGHDWDPTCMK-MDEVLYSIAEKVKNF-AVIYLVDI 81 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~-mDevL~kia~kvknf-avIYlvDi 81 (160)
.+||-|+..|-|.|.+ +-..|.+++++.+.- ..+..|++
T Consensus 32 ~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~ 72 (160)
T 3lor_A 32 VVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHS 72 (160)
T ss_dssp EEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEEC
T ss_pred EEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEec
Confidence 3588999999999998 588899999887642 44455543
No 308
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=75.18 E-value=3.9 Score=30.67 Aligned_cols=25 Identities=16% Similarity=0.126 Sum_probs=20.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.|+||.||..|+...+
T Consensus 124 l~~~F~~~D~d~~G~Is~~E~~~~l 148 (226)
T 2zfd_A 124 IHFSFQLYDLKQQGFIERQEVKQMV 148 (226)
T ss_dssp HHHHHHHHCTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcccHHHHHHHH
Confidence 4567888999999999999988765
No 309
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=75.10 E-value=1.5 Score=31.37 Aligned_cols=25 Identities=20% Similarity=0.416 Sum_probs=22.4
Q ss_pred hhHHhhcc-CCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKC-DADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~C-D~~~D~~is~~EW~~C~ 31 (160)
++..|+.. |+|+||.||..|+..++
T Consensus 14 l~~~F~~~~D~d~dG~i~~~E~~~~l 39 (191)
T 2ccm_A 14 ILRVFNTFYDCNHDGVIEWDDFELAI 39 (191)
T ss_dssp HHHHHHHHTCTTCSSEECHHHHHHHH
T ss_pred HHHhccccccCCCCCeeeHHHHHHHH
Confidence 56789999 99999999999998875
No 310
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=75.09 E-value=1.5 Score=30.38 Aligned_cols=25 Identities=28% Similarity=0.320 Sum_probs=22.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++.-|+..|+|+||.||..|...++
T Consensus 8 l~~~F~~~D~d~~G~I~~~el~~~l 32 (143)
T 2obh_A 8 IREAFDLFDADGTGTIDVKELKVAM 32 (143)
T ss_dssp HHHHHHTTCTTCCSEEEGGGHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 3567899999999999999999876
No 311
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=74.80 E-value=3.6 Score=33.38 Aligned_cols=81 Identities=11% Similarity=0.190 Sum_probs=56.8
Q ss_pred hhhhhcc--CCCChhhhhhHHHHHHHHHhhhc---ceEEEEEeCCc-----ccccccccccc--ccceeeeeeeCc-eeE
Q psy4160 43 EDVIRFG--HDWDPTCMKMDEVLYSIAEKVKN---FAVIYLVDITK-----VPDFNKMYELY--DPCTCMFFFRNK-HIM 109 (160)
Q Consensus 43 ~~viRFG--rd~dp~Cm~mDevL~kia~kvkn---favIYlvDi~~-----Vpdfn~myeL~--dP~tvmFFfrnk-Hm~ 109 (160)
-+++-|. -+|-+ |..++.++|++.+. -..|+-||+++ -|+..+-|.+. .-+|++||- ++ ...
T Consensus 35 ~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~PTl~~F~-G~~~~~ 109 (248)
T 2c0g_A 35 YSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKNFPSIFLFK-GNADEY 109 (248)
T ss_dssp EEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTSCCEEEEES-SSSSSE
T ss_pred CEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCCCCeEEEEe-CCcCcc
Confidence 3578898 66655 88899999998743 57889999988 88999999998 778887775 55 223
Q ss_pred EecC-CCCCceeeeecCChhHHHHHHHH
Q psy4160 110 IDLG-TGNNNKINWALEDKQEMIDIVET 136 (160)
Q Consensus 110 vD~G-TgnnnKin~~~~~kqe~iDiie~ 136 (160)
.++. +|. .++++|++.|+.
T Consensus 110 ~~y~~~G~--------~~~~~L~~fi~~ 129 (248)
T 2c0g_A 110 VQLPSHVD--------VTLDNLKAFVSA 129 (248)
T ss_dssp EECCTTSC--------CCHHHHHHHHHH
T ss_pred eeecccCC--------CCHHHHHHHHHH
Confidence 4441 222 344566666654
No 312
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=74.79 E-value=1.6 Score=32.23 Aligned_cols=25 Identities=20% Similarity=0.367 Sum_probs=22.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+.+|.|+||.||..|+...+
T Consensus 100 l~~~F~~~D~d~dG~Is~~El~~~l 124 (179)
T 3a8r_A 100 LRTFFDMVDKNADGRLTAEEVKEII 124 (179)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 5678999999999999999999875
No 313
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=74.63 E-value=2.3 Score=30.08 Aligned_cols=25 Identities=20% Similarity=0.189 Sum_probs=18.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+.+|.++||.||..|+...+
T Consensus 94 ~~~~f~~~D~d~~G~i~~~e~~~~~ 118 (183)
T 1s6c_A 94 LRWTFNLYDINKDGYINKEEMMDIV 118 (183)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 4567788888888888888887764
No 314
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=74.59 E-value=1.4 Score=32.51 Aligned_cols=24 Identities=25% Similarity=0.501 Sum_probs=21.1
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
..+|+..|.|+||.||..||...+
T Consensus 157 ~~~~~~~D~d~dG~Is~~EF~~~~ 180 (208)
T 2ct9_A 157 DRTIQEADQDGDSAISFTEFVKVL 180 (208)
T ss_dssp HHHHHHHCSSSSSSEEHHHHHHTT
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHH
Confidence 345999999999999999999874
No 315
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=74.52 E-value=1.3 Score=28.31 Aligned_cols=58 Identities=10% Similarity=0.079 Sum_probs=35.9
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCC---ccccccccccccccceeeeeeeCc
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT---KVPDFNKMYELYDPCTCMFFFRNK 106 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~---~Vpdfn~myeL~dP~tvmFFfrnk 106 (160)
++=|..+|=|.|.++-.+|.+++++.. ..+-++|++ +-++..+-|.+..-+|+ |++++
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~gv~~vPt~--~i~g~ 64 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSK--YTVEIVHLGTDKARIAEAEKAGVKSVPAL--VIDGA 64 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTT--EEEEEEETTTCSSTHHHHHHHTCCEEEEE--EETTE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcC--CeEEEEEecCChhhHHHHHHcCCCcCCEE--EECCE
Confidence 445888999999999998888765422 223455655 34555555665444453 33554
No 316
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=74.46 E-value=1.6 Score=29.74 Aligned_cols=24 Identities=13% Similarity=0.390 Sum_probs=21.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+...++..|+|+||.|+..|+..-
T Consensus 55 v~~~i~~~D~d~DG~Idf~EF~~~ 78 (93)
T 4eto_A 55 FQKLMSNLDSNRDNEVDFQEYCVF 78 (93)
T ss_dssp HHHHHHHHCTTSSSSBCHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCcHHHHHHH
Confidence 567889999999999999999764
No 317
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=74.41 E-value=1.8 Score=30.05 Aligned_cols=25 Identities=28% Similarity=0.345 Sum_probs=20.7
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+..|.++||.||..|+...+
T Consensus 103 ~~~~F~~~D~d~~G~i~~~el~~~l 127 (169)
T 3qrx_A 103 ILKAFRLFDDDNSGTITIKDLRRVA 127 (169)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 4456888999999999999998875
No 318
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=74.36 E-value=2.3 Score=30.41 Aligned_cols=25 Identities=16% Similarity=0.117 Sum_probs=18.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|....+
T Consensus 50 l~~~F~~~D~d~dG~I~~~El~~~l 74 (147)
T 1wy9_A 50 FKVKYMEFDLNGNGDIDIMSLKRML 74 (147)
T ss_dssp HHHHHTTSCCCTTSSEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4556777788888888877777654
No 319
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=74.30 E-value=1.6 Score=32.41 Aligned_cols=27 Identities=26% Similarity=0.411 Sum_probs=23.9
Q ss_pred cchhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 5 HCIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 5 ~C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.-+...|+..|.|+||.||..||...+
T Consensus 135 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 161 (211)
T 2ggz_A 135 EFINLVFHKIDINNDGELTLEEFINGM 161 (211)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCcHHHHHHHH
Confidence 346788999999999999999999975
No 320
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=73.93 E-value=1.5 Score=32.70 Aligned_cols=26 Identities=19% Similarity=0.179 Sum_probs=23.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++..|+..|+++||.||..|+..++.
T Consensus 18 l~~~F~~~D~d~~G~i~~~El~~~l~ 43 (263)
T 2f33_A 18 FFEIWLHFDADGSGYLEGKELQNLIQ 43 (263)
T ss_dssp HHHHHHHHCTTCSSSBCSHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence 56789999999999999999998863
No 321
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=73.92 E-value=1.7 Score=29.13 Aligned_cols=25 Identities=24% Similarity=0.321 Sum_probs=21.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
....|+..|.++||.||..|+...+
T Consensus 86 ~~~~F~~~D~d~~G~i~~~e~~~~l 110 (147)
T 4ds7_A 86 LLEAFKVFDKNGDGLISAAELKHVL 110 (147)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeECHHHHHHHH
Confidence 4567888999999999999988875
No 322
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=73.87 E-value=2.3 Score=28.68 Aligned_cols=26 Identities=19% Similarity=0.139 Sum_probs=22.6
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
=++..|+..|+++||.||..|+...+
T Consensus 77 ~~~~~F~~~D~d~~G~i~~~el~~~l 102 (140)
T 1ggw_A 77 EFVKGFQVFDKDATGMIGVGELRYVL 102 (140)
T ss_dssp HHHHHHHTTCSSCSSCCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 35678999999999999999998864
No 323
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=73.80 E-value=0.75 Score=31.49 Aligned_cols=25 Identities=4% Similarity=-0.102 Sum_probs=22.5
Q ss_pred hhHHhhccCCCC-CCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADD-DHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~-D~~is~~EW~~C~ 31 (160)
++..|+..|+++ ||.||..|+..++
T Consensus 16 l~~~F~~~D~d~~~G~i~~~el~~~l 41 (146)
T 2qac_A 16 ESDVRIYFNEKSSGGKISIDNASYNA 41 (146)
T ss_dssp HHHHHHHHHHHCBTTBEEHHHHHHHH
T ss_pred HHHHHHHhCccCCCCcccHHHHHHHH
Confidence 467899999999 9999999999884
No 324
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=73.77 E-value=2.2 Score=30.38 Aligned_cols=26 Identities=15% Similarity=0.500 Sum_probs=23.1
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
-+...|+..|.++||.||..||...+
T Consensus 67 ~~~~l~~~~D~d~~g~i~~~EF~~~~ 92 (195)
T 1qv0_A 67 CVEAFFRGCGMEYGKEIAFPQFLDGW 92 (195)
T ss_dssp HHHHHHHHTTCCTTCCBCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCceEcHHHHHHHH
Confidence 35678999999999999999999875
No 325
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=73.73 E-value=1.6 Score=29.02 Aligned_cols=59 Identities=24% Similarity=0.255 Sum_probs=37.7
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccc-------cccccccccccceeeeeeeCcee
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVP-------DFNKMYELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vp-------dfn~myeL~dP~tvmFFfrnkHm 108 (160)
|+=|+.+|-|.|.++-.+|.+.+..-++ +..+|+++-| .+.+.+....-++ +|.+++++
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~--i~~~g~~i 79 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEGL---LEFVDITATSDTNEIQDYLQQLTGARTVPR--VFIGKECI 79 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTTS---EEEEEGGGSTTHHHHHHHHHHHHSCCCSCE--EEETTEEE
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCCc---cEEEEccCCCCHHHHHHHHHHHhCCCCcCe--EEECCEEE
Confidence 5569999999999988888776443222 4567887753 2444555444445 35566654
No 326
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=73.69 E-value=1 Score=31.24 Aligned_cols=25 Identities=12% Similarity=0.131 Sum_probs=22.5
Q ss_pred hhHHhhccC--CCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCD--ADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD--~~~D~~is~~EW~~C~ 31 (160)
++..|+..| +++||.||..|+..++
T Consensus 11 l~~~F~~~D~~~d~~G~i~~~el~~~l 37 (159)
T 2ovk_C 11 VREVFDLFDFWDGRDGDVDAAKVGDLL 37 (159)
T ss_dssp HHHHHHHHHHHTTSSSEEEGGGHHHHH
T ss_pred HHHHHHHhCCCCCCCCCCcHHHHHHHH
Confidence 467899999 9999999999999876
No 327
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=73.39 E-value=2.1 Score=29.76 Aligned_cols=24 Identities=21% Similarity=0.339 Sum_probs=21.7
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+...++..|+|+||.|+..|+..-
T Consensus 57 v~~~i~~~D~d~DG~Idf~EF~~~ 80 (100)
T 3nxa_A 57 ADKLIQNLDANHDGRISFDEYWTL 80 (100)
T ss_dssp HHHHHHHSCCCSSCCBCHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCcHHHHHHH
Confidence 577899999999999999999874
No 328
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=73.10 E-value=0.99 Score=30.39 Aligned_cols=26 Identities=19% Similarity=0.356 Sum_probs=22.8
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
-+...++..|.|+||.|+..||...+
T Consensus 45 ~~~~i~~~~D~d~dG~i~~~EF~~~~ 70 (95)
T 1c07_A 45 LLAHIWSLCDTKDCGKLSKDQFALAF 70 (95)
T ss_dssp HHHHHHHHHCTTCSSSEETTTHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 35678899999999999999998875
No 329
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=73.04 E-value=1.9 Score=30.06 Aligned_cols=26 Identities=15% Similarity=0.371 Sum_probs=22.5
Q ss_pred cchhHHhhccCCCCCCcccHHHHHHh
Q psy4160 5 HCIAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 5 ~C~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
.=+...|+..|.|+||.||..||..-
T Consensus 56 ~~v~~l~~~~D~d~dG~I~f~EF~~~ 81 (113)
T 1xk4_C 56 KVIEHIMEDLDTNADKQLSFEEFIML 81 (113)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCEeHHHHHHH
Confidence 34577899999999999999999864
No 330
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=73.01 E-value=2.9 Score=30.07 Aligned_cols=24 Identities=25% Similarity=0.248 Sum_probs=14.0
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
...|+.+|.++||.||..||...+
T Consensus 76 ~~~~~~~D~d~~g~i~~~Ef~~~~ 99 (180)
T 3mse_B 76 NRILQALDINDRGNITYTEFMAGC 99 (180)
T ss_dssp HHHHHHHCTTCCSEECHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHH
Confidence 455566666666666666665544
No 331
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=72.92 E-value=1.8 Score=31.43 Aligned_cols=25 Identities=20% Similarity=0.420 Sum_probs=22.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..||...+
T Consensus 54 ~~~~f~~~D~d~~G~I~~~Ef~~~~ 78 (198)
T 2r2i_A 54 VEQMFETFDFNKDGYIDFMEYVAAL 78 (198)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCeEcHHHHHHHH
Confidence 5678999999999999999999876
No 332
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=72.76 E-value=1.7 Score=29.34 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=22.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|....+
T Consensus 78 l~~~F~~~D~d~~G~I~~~El~~~l 102 (143)
T 3j04_B 78 IRNAFACFDEEASGFIHEDHLRELL 102 (143)
T ss_dssp HHHHHTTSCSSSCCCCCTTTHHHHH
T ss_pred HHHHHHHHCCCCCCeEcHHHHHHHH
Confidence 5677999999999999999999875
No 333
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=72.70 E-value=1.8 Score=31.70 Aligned_cols=23 Identities=9% Similarity=0.216 Sum_probs=20.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHH
Q psy4160 7 IAPFLNKCDADDDHLITLKEWAR 29 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~ 29 (160)
+...++..|.|+||.|+..|+..
T Consensus 57 v~~~i~~~D~d~DG~IdF~EF~~ 79 (121)
T 4drw_A 57 VDKIMKDLDQCRDGKVGFQSFFS 79 (121)
T ss_dssp HHHHHHHHCTTCSSCCCHHHHHH
T ss_pred HHHHHHHHcCCCCCcCcHHHHHH
Confidence 56789999999999999999986
No 334
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=72.70 E-value=2 Score=30.39 Aligned_cols=27 Identities=4% Similarity=0.069 Sum_probs=23.4
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
-+...|+..|+++||.||..||...+.
T Consensus 63 ~~~~l~~~~D~d~~g~i~~~EF~~~~~ 89 (191)
T 1uhk_A 63 AVEAFFGGAGMKYGVETDWPAYIEGWK 89 (191)
T ss_dssp HHHHHHHHTTCCTTCEEEHHHHHHHHH
T ss_pred HHHHHHHHhCcCCCCcCcHHHHHHHHH
Confidence 356799999999999999999988753
No 335
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=72.69 E-value=1.5 Score=31.91 Aligned_cols=23 Identities=4% Similarity=0.062 Sum_probs=19.5
Q ss_pred hHHhhccCCCCCCcccHHHHHHh
Q psy4160 8 APFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+..|+.+|+|+||.||..|+..+
T Consensus 32 ~~~F~~~D~d~dG~I~~~El~~~ 54 (202)
T 2bec_A 32 HHRFRALDRNKKGYLSRMDLQQI 54 (202)
T ss_dssp HHHHHHHCSSCSSCCCHHHHHTC
T ss_pred HHHHHHHCCCCCCCcCHHHHHHH
Confidence 45688999999999999998875
No 336
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=72.64 E-value=9.7 Score=25.98 Aligned_cols=41 Identities=12% Similarity=0.020 Sum_probs=31.0
Q ss_pred hhhhccCCCChhhhhhHHHHHH---HHHhhhc-ceEEEEEeCCcc
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYS---IAEKVKN-FAVIYLVDITKV 84 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~k---ia~kvkn-favIYlvDi~~V 84 (160)
+||-|.-.|-+.|.++-..|.+ ++++.++ =..+..|+.++-
T Consensus 34 vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~ 78 (142)
T 3eur_A 34 TLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEE 78 (142)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSC
T ss_pred EEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCC
Confidence 5888999999999998888988 8877643 244455666654
No 337
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=72.49 E-value=1.5 Score=26.94 Aligned_cols=26 Identities=15% Similarity=0.284 Sum_probs=22.8
Q ss_pred chhHHhhccCC-CCCC-cccHHHHHHhh
Q psy4160 6 CIAPFLNKCDA-DDDH-LITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~-~~D~-~is~~EW~~C~ 31 (160)
-++..|+..|. ++|| .||..|....+
T Consensus 8 ~l~~~F~~~D~~d~~G~~i~~~el~~~l 35 (78)
T 1cb1_A 8 ELKSIFEKYAAKEGDPNQLSKEELKQLI 35 (78)
T ss_dssp HHHHHHHHHHTTSSSTTEECHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcCEeCHHHHHHHH
Confidence 35678999999 9999 99999999875
No 338
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=72.42 E-value=2.5 Score=28.99 Aligned_cols=25 Identities=16% Similarity=0.147 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|....+
T Consensus 87 l~~~F~~~D~d~~G~I~~~el~~~l 111 (153)
T 2ovk_B 87 LRNAFSMFDEDGQGFIPEDYLKDLL 111 (153)
T ss_dssp HHHHHHTTCSSCSSCCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCeEcHHHHHHHH
Confidence 5677999999999999999998875
No 339
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=72.34 E-value=5.1 Score=30.23 Aligned_cols=25 Identities=20% Similarity=0.210 Sum_probs=20.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++.-|+..|.|+||.||..|....+
T Consensus 131 l~~~F~~~D~d~dG~Is~~El~~~l 155 (214)
T 2l4h_A 131 SHYAFRIFDFDDDGTLNREDLSRLV 155 (214)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 4567888999999999999987764
No 340
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=72.27 E-value=12 Score=26.00 Aligned_cols=40 Identities=15% Similarity=0.231 Sum_probs=30.6
Q ss_pred hhhhhccCCCChh-hhhhHHHHHHHHHhhh-----cceEEEEEeCC
Q psy4160 43 EDVIRFGHDWDPT-CMKMDEVLYSIAEKVK-----NFAVIYLVDIT 82 (160)
Q Consensus 43 ~~viRFGrd~dp~-Cm~mDevL~kia~kvk-----nfavIYlvDi~ 82 (160)
.+||-|+-.|-|+ |..+=..|.+++++.+ .-..+..|.++
T Consensus 28 ~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d 73 (171)
T 2rli_A 28 WVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVD 73 (171)
T ss_dssp EEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESC
T ss_pred EEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEEC
Confidence 3588999999997 9998888999988874 23455566665
No 341
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=72.26 E-value=1.7 Score=31.21 Aligned_cols=25 Identities=4% Similarity=0.296 Sum_probs=19.7
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+.+|.++||.||..||...+
T Consensus 88 ~~~l~~~~D~d~dg~I~~~eF~~~~ 112 (150)
T 2jjz_A 88 MKKMISEVTGGVSDTISYRDFVNMM 112 (150)
T ss_dssp HHHHHHHHHTTSCSSBCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHH
Confidence 3467788888888888888888775
No 342
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=72.25 E-value=2 Score=29.75 Aligned_cols=24 Identities=17% Similarity=0.434 Sum_probs=21.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+...++..|+|+||.|+..|+..-
T Consensus 56 v~~~i~~~D~d~DG~Idf~EF~~~ 79 (98)
T 3n22_A 56 LKKLMGSLDENSDQQVDFQEYAVF 79 (98)
T ss_dssp HHHHHHHHCTTSSSSBCHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCcHHHHHHH
Confidence 567889999999999999999763
No 343
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=72.12 E-value=2 Score=29.41 Aligned_cols=24 Identities=25% Similarity=0.428 Sum_probs=21.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+...++..|.|+||.|+..|+..-
T Consensus 54 v~~l~~~~D~d~dG~I~f~EF~~~ 77 (100)
T 1psr_A 54 LADVFEKKDKNEDKKIDFSEFLSL 77 (100)
T ss_dssp GGTHHHHHCTTCSSCBCHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHH
Confidence 567889999999999999999875
No 344
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=72.03 E-value=8.9 Score=26.20 Aligned_cols=41 Identities=10% Similarity=0.114 Sum_probs=31.0
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhc-ceEEEEEeCCc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvkn-favIYlvDi~~ 83 (160)
.+||-|+-.|-++|.++-..|.+++++.+. =..+..|++++
T Consensus 34 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~ 75 (143)
T 4fo5_A 34 YTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDE 75 (143)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCS
T ss_pred EEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccC
Confidence 358899999999999988888888887642 24556666663
No 345
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=71.87 E-value=2.4 Score=30.14 Aligned_cols=25 Identities=20% Similarity=0.413 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+..++
T Consensus 65 ~~~~f~~~D~d~~G~i~~~ef~~~~ 89 (190)
T 1fpw_A 65 ANHLFTVFDKDNNGFIHFEEFITVL 89 (190)
T ss_dssp HHHHHHTCCSSCSSEECHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHH
Confidence 5678999999999999999999875
No 346
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=71.86 E-value=2 Score=29.51 Aligned_cols=27 Identities=11% Similarity=0.122 Sum_probs=23.6
Q ss_pred cchhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 5 HCIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 5 ~C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.-++..|+..|+++||.||..|+...+
T Consensus 91 ~~~~~~F~~~D~d~~G~I~~~el~~~l 117 (158)
T 2jnf_A 91 QELREAFRLYDKEGNGYISTDVMREIL 117 (158)
T ss_dssp STHHHHHHHHCSSSSSSEEHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 346778999999999999999998875
No 347
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=71.76 E-value=1.1 Score=32.69 Aligned_cols=25 Identities=28% Similarity=0.326 Sum_probs=21.6
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++. |...|+++||.||..|+..++.
T Consensus 35 l~~-F~~~D~d~~G~i~~~el~~~l~ 59 (198)
T 1juo_A 35 LYG-YFAAVAGQDGQIDADELQRCLT 59 (198)
T ss_dssp THH-HHHHHHTTTTEECHHHHHHHHH
T ss_pred HHH-HHHHhCCCCCcCCHHHHHHHHH
Confidence 356 7899999999999999998863
No 348
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=71.68 E-value=1.9 Score=31.42 Aligned_cols=25 Identities=20% Similarity=0.453 Sum_probs=21.7
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|+|+||.||..||..++
T Consensus 61 ~~~~f~~~D~d~~G~i~~~Ef~~~~ 85 (204)
T 1jba_A 61 VEAMFRAFDTNGDNTIDFLEYVAAL 85 (204)
T ss_dssp HHHHHHHHCCSSSSEECHHHHHHHH
T ss_pred HHHHHHHHcCCCCCeEeHHHHHHHH
Confidence 4567899999999999999998876
No 349
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=71.66 E-value=2.3 Score=25.90 Aligned_cols=26 Identities=15% Similarity=0.146 Sum_probs=22.6
Q ss_pred chhHHhhcc-CCCCC-CcccHHHHHHhh
Q psy4160 6 CIAPFLNKC-DADDD-HLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~C-D~~~D-~~is~~EW~~C~ 31 (160)
=++..|+.. |.++| |.||..|....+
T Consensus 6 ~l~~~F~~~~D~d~~~G~i~~~el~~~l 33 (76)
T 1qx2_A 6 EIKGAFEVFAAKEGDPNQISKEELKLVM 33 (76)
T ss_dssp HHHHHHHHHHTSSSCTTSEEHHHHHHHH
T ss_pred HHHHHHHHHcccCCCcCeECHHHHHHHH
Confidence 356789999 99999 999999998874
No 350
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=71.61 E-value=3.9 Score=31.02 Aligned_cols=25 Identities=20% Similarity=0.189 Sum_probs=20.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+.+|.|+||.||..|+...+
T Consensus 127 l~~~F~~~D~d~dG~Is~~E~~~~l 151 (224)
T 1s1e_A 127 LRWTFNLYDINKDGYINKEEMMDIV 151 (224)
T ss_dssp HHHHHHHHCTTCCSEECHHHHHHHH
T ss_pred HHHHHHHHcCCCCCeECHHHHHHHH
Confidence 4567888899999999999988875
No 351
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=71.55 E-value=12 Score=31.66 Aligned_cols=95 Identities=12% Similarity=-0.072 Sum_probs=57.8
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhc-ceEEEEEeCCcc---------------------------ccccccccccc
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITKV---------------------------PDFNKMYELYD 95 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvkn-favIYlvDi~~V---------------------------pdfn~myeL~d 95 (160)
+||-|+-.|-|.|.++-..|.+++++.+. =..+..|++++. ....+.|.+.-
T Consensus 85 vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~~ 164 (352)
T 2hyx_A 85 VLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNRY 164 (352)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCCE
T ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCCc
Confidence 58999999999999999999999998764 245556655431 22333344432
Q ss_pred cceeeeeeeCceeEEecCCCCCceeeeecCChhHHHHHHHHHhhccccCCee
Q psy4160 96 PCTCMFFFRNKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRGL 147 (160)
Q Consensus 96 P~tvmFFfrnkHm~vD~GTgnnnKin~~~~~kqe~iDiie~iyrga~kGk~i 147 (160)
-+|++++-++..+. . ++.+ ..+.+++.+.|+.+-+.+..|..+
T Consensus 165 ~Pt~~lID~~G~Iv-~-------~~~G-~~~~~~l~~~I~~lL~e~~~~~~l 207 (352)
T 2hyx_A 165 WPAEYLIDATGTVR-H-------IKFG-EGDYNVTETLVRQLLNDAKPGVKL 207 (352)
T ss_dssp ESEEEEECTTSBEE-E-------EEES-BCCHHHHHHHHHHHHHHHSTTCCC
T ss_pred cCEEEEEeCCCeEE-E-------EEcC-CCCHHHHHHHHHHHHhhccCCCCC
Confidence 23332332332221 1 1111 235688999999988877766544
No 352
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=71.52 E-value=1.1 Score=30.89 Aligned_cols=59 Identities=22% Similarity=0.209 Sum_probs=38.4
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccc-------cccccccccccceeeeeeeCcee
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVP-------DFNKMYELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vp-------dfn~myeL~dP~tvmFFfrnkHm 108 (160)
|+=|+.+|-|.|.++-.+|.+.+..-.+ +..+|+++-| .+.+.|....-+++ |++++++
T Consensus 21 vv~f~~~~Cp~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v--~i~g~~i 86 (114)
T 2hze_A 21 VTIFVKYTCPFCRNALDILNKFSFKRGA---YEIVDIKEFKPENELRDYFEQITGGKTVPRI--FFGKTSI 86 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHTTSCBCTTS---EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEE--EETTEEE
T ss_pred EEEEEeCCChhHHHHHHHHHHcCCCcCc---eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEE
Confidence 6669999999999988877665322111 5678988776 45555555443453 5566653
No 353
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=71.48 E-value=2.3 Score=28.59 Aligned_cols=25 Identities=16% Similarity=0.114 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 87 ~~~~F~~~D~d~~G~i~~~el~~~l 111 (149)
T 2mys_C 87 FVEGLRVFDKEGNGTVMGAELRHVL 111 (149)
T ss_pred HHHHHHHhCCCCCceEcHHHHHHHH
Confidence 5677999999999999999998875
No 354
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=71.33 E-value=2.3 Score=31.10 Aligned_cols=25 Identities=16% Similarity=0.311 Sum_probs=22.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.|+||.||..|+...+
T Consensus 130 ~~~~F~~~D~d~~G~Is~~El~~~l 154 (208)
T 2hpk_A 130 SNSYYDVLDDDGDGTVDVDELKTMM 154 (208)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 4668999999999999999998764
No 355
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=71.21 E-value=2.5 Score=29.27 Aligned_cols=26 Identities=23% Similarity=0.342 Sum_probs=23.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
+...|+.+|.++||.||..||...+.
T Consensus 65 ~~~~~~~~d~~~~g~i~~~ef~~~~~ 90 (166)
T 2aao_A 65 ILDLMQAADVDNSGTIDYKEFIAATL 90 (166)
T ss_dssp HHHHHHHHCTTCCSSBCHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 56789999999999999999998753
No 356
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=71.03 E-value=2.4 Score=28.76 Aligned_cols=26 Identities=8% Similarity=0.094 Sum_probs=22.7
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
-++..|+..|+++||.||..|+...+
T Consensus 84 ~~~~~F~~~D~d~~G~I~~~el~~~l 109 (148)
T 1m45_A 84 DFVKAFQVFDKESTGKVSVGDLRYML 109 (148)
T ss_dssp HHHHHHHTTCSSSSSEEEHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 35678999999999999999998874
No 357
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=70.61 E-value=1.6 Score=30.75 Aligned_cols=25 Identities=28% Similarity=0.320 Sum_probs=20.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
.++ |...|+|+||.||..|+..++.
T Consensus 4 ~~~-F~~~D~d~~G~i~~~el~~~l~ 28 (167)
T 1gjy_A 4 LYG-YFASVAGQDGQIDADELQRCLT 28 (167)
T ss_dssp THH-HHHHHCCTTSCBCHHHHHHHHH
T ss_pred HHH-HHHHHcCCCCcCCHHHHHHHHH
Confidence 455 5588999999999999998853
No 358
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=70.59 E-value=2 Score=30.50 Aligned_cols=25 Identities=24% Similarity=0.352 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+..|.++||.||..|+...+
T Consensus 65 ~~~~f~~~D~d~~g~i~~~ef~~~~ 89 (190)
T 1g8i_A 65 ATFVFNVFDENKDGRIEFSEFIQAL 89 (190)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEeHHHHHHHH
Confidence 5678999999999999999999875
No 359
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=70.53 E-value=18 Score=27.48 Aligned_cols=41 Identities=10% Similarity=0.030 Sum_probs=31.2
Q ss_pred hhhhhcc-CCCChhhhhhHHHHHHHHHhhh-cceEEEEEeCCc
Q psy4160 43 EDVIRFG-HDWDPTCMKMDEVLYSIAEKVK-NFAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFG-rd~dp~Cm~mDevL~kia~kvk-nfavIYlvDi~~ 83 (160)
-+||-|. -.|-|.|..+=..|.+++++.+ +=+.++.|.+++
T Consensus 54 ~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~ 96 (213)
T 2i81_A 54 YVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDS 96 (213)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred eEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3689999 8899999998888888888764 235556667664
No 360
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=70.40 E-value=3 Score=29.81 Aligned_cols=25 Identities=16% Similarity=0.185 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|...++
T Consensus 52 l~~~F~~~D~d~~G~I~~~el~~~l 76 (150)
T 2jjz_A 52 FKEKYMEFDLNNEGEIDLMSLKRMM 76 (150)
T ss_dssp HHHHHTTSCCCTTSSBCHHHHHHHH
T ss_pred HHHHHHHhCCCCcCcCCHHHHHHHH
Confidence 4567999999999999999999875
No 361
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=70.35 E-value=1.4 Score=29.05 Aligned_cols=25 Identities=20% Similarity=0.244 Sum_probs=21.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+..|.++||.||..|....+
T Consensus 43 l~~~F~~~D~d~~G~I~~~el~~~l 67 (108)
T 2kyc_A 43 LKEIFRILDNDQSGFIEEDELKYFL 67 (108)
T ss_dssp HHHHCSSSCSCCSSCCCGGGTTTSH
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 4567899999999999999988764
No 362
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=70.22 E-value=2.5 Score=30.08 Aligned_cols=25 Identities=24% Similarity=0.306 Sum_probs=19.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 101 ~~~~f~~~D~d~~G~i~~~e~~~~~ 125 (190)
T 2l2e_A 101 LIWAFQLYDLDNNGLISYDEMLRIV 125 (190)
T ss_dssp HHHHHHHHCTTSCSCBCHHHHHHHH
T ss_pred HHHHHhHccCCCCCcCcHHHHHHHH
Confidence 4556788888888888888887764
No 363
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=70.16 E-value=2.7 Score=30.62 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=15.0
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+..|+..|.++||.||..|+...+
T Consensus 106 ~~~F~~~D~d~~G~I~~~el~~~l 129 (198)
T 1juo_A 106 RQHFISFDTDRSGTVDPQELQKAL 129 (198)
T ss_dssp HHHHHTTCTTCCSEECHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCCHHHHHHHH
Confidence 344666666666666666666553
No 364
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=69.79 E-value=2.3 Score=30.08 Aligned_cols=25 Identities=12% Similarity=0.291 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+..|.++||.||..||...+
T Consensus 58 ~~~~f~~~D~d~~g~i~~~Ef~~~~ 82 (183)
T 1s6c_A 58 AHYLFNAFDTTQTGSVKFEDFVTAL 82 (183)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 4568999999999999999999875
No 365
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=69.64 E-value=2.9 Score=29.93 Aligned_cols=26 Identities=4% Similarity=0.208 Sum_probs=21.5
Q ss_pred hHHhhccCCCCCCcccHHHHHHhhcC
Q psy4160 8 APFLNKCDADDDHLITLKEWARCLEL 33 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~~L 33 (160)
...|+.+|.++||.||..||...+.-
T Consensus 87 ~~l~~~~D~d~dg~I~~~eF~~~~~~ 112 (147)
T 1wy9_A 87 KRLIREVSSGSEETFSYSDFLRMMLG 112 (147)
T ss_dssp HHHHHHHCSSCTTEECHHHHHHHHCS
T ss_pred HHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 45788899999999999999987643
No 366
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=69.56 E-value=3 Score=30.29 Aligned_cols=27 Identities=11% Similarity=0.158 Sum_probs=23.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhcC
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLEL 33 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~L 33 (160)
+...|+..|.++||.||..||...+..
T Consensus 63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~ 89 (202)
T 2bec_A 63 GDRIIESFFPDGSQRVDFPGFVRVLAH 89 (202)
T ss_dssp HHHHHHTTSCSSCCCCCHHHHHHHHGG
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 678899999999999999999987643
No 367
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=69.56 E-value=1.2 Score=30.63 Aligned_cols=25 Identities=8% Similarity=0.054 Sum_probs=22.3
Q ss_pred hhHHhhccCC--CCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDA--DDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~--~~D~~is~~EW~~C~ 31 (160)
++..|+..|. ++||.||..|+...+
T Consensus 11 l~~~F~~~D~~~d~~G~i~~~el~~~l 37 (156)
T 1wdc_C 11 LKDVFELFDFWDGRDGAVDAFKLGDVC 37 (156)
T ss_dssp HHHHHHHHHHHTCSSSCEEGGGHHHHH
T ss_pred HHHHHHHHccCCCCCCCCcHHHHHHHH
Confidence 4678999999 999999999999875
No 368
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=69.42 E-value=2.7 Score=28.99 Aligned_cols=25 Identities=20% Similarity=0.248 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|....+
T Consensus 87 l~~~F~~~D~d~~G~I~~~El~~~l 111 (159)
T 2ovk_C 87 FMEAFKTFDREGQGLISSAEIRNVL 111 (159)
T ss_dssp HHHHHHHTCTTSSSEECHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 5667999999999999999998875
No 369
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=69.30 E-value=2.2 Score=30.26 Aligned_cols=25 Identities=24% Similarity=0.211 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 101 ~~~~f~~~D~d~~G~i~~~e~~~~l 125 (190)
T 1g8i_A 101 LRWAFKLYDLDNDGYITRNEMLDIV 125 (190)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred HHHHHHhhcCCCCCeECHHHHHHHH
Confidence 4668999999999999999999875
No 370
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=69.24 E-value=2.6 Score=28.60 Aligned_cols=25 Identities=8% Similarity=0.216 Sum_probs=21.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...++..|.|+||.|+..|+..-+
T Consensus 51 v~~l~~~~D~d~dG~I~f~EF~~~~ 75 (96)
T 1a4p_A 51 VDKIMKDLDQCRDGKVGFQSFFSLI 75 (96)
T ss_dssp HHHHHHHHCTTSSSCBCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 5678899999999999999998753
No 371
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=69.13 E-value=2.6 Score=28.38 Aligned_cols=24 Identities=21% Similarity=0.408 Sum_probs=21.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+...++..|+|+||.|+..|+..-
T Consensus 57 v~~~~~~~D~d~dG~I~f~EF~~~ 80 (95)
T 2wcb_A 57 IDEIFQGLDANQDEQVDFQEFISL 80 (95)
T ss_dssp HHHHHTTSSSSTTSEEEHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCcHHHHHHH
Confidence 467889999999999999999875
No 372
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=69.01 E-value=1.2 Score=37.37 Aligned_cols=71 Identities=11% Similarity=0.170 Sum_probs=49.8
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCC------ccccccccccccccceeeeeeeCceeEEecCCCCC
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT------KVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNN 117 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~------~Vpdfn~myeL~dP~tvmFFfrnkHm~vD~GTgnn 117 (160)
.|+-|+-+|=|.|.+|-.++.++|++++ .+|++ +-|+..+-|.+.-=+| +|.++++
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~vPT--~~i~G~~---------- 261 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPT--WIINGRT---------- 261 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCSTTE--EEETTEE----------
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCcccCe--EEECCEE----------
Confidence 4889999999999999999999987653 23433 3677778888877667 4445542
Q ss_pred ceeeeecCChhHHHHHHH
Q psy4160 118 NKINWALEDKQEMIDIVE 135 (160)
Q Consensus 118 nKin~~~~~kqe~iDiie 135 (160)
+.+ ..+++++.+.++
T Consensus 262 --~~G-~~~~~~L~~~l~ 276 (291)
T 3kp9_A 262 --YTG-VRSLEALAVASG 276 (291)
T ss_dssp --EES-CCCHHHHHHHTC
T ss_pred --ecC-CCCHHHHHHHHC
Confidence 333 345677776654
No 373
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=68.83 E-value=2.3 Score=30.26 Aligned_cols=26 Identities=23% Similarity=0.368 Sum_probs=22.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++..|+..|.++||.||..|+...+.
T Consensus 65 ~~~~f~~~D~d~~g~i~~~Ef~~~~~ 90 (193)
T 1bjf_A 65 AEHVFRTFDANGDGTIDFREFIIALS 90 (193)
T ss_dssp HHHHHHHHCSSCSSEEEHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 56789999999999999999998753
No 374
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=68.48 E-value=5.6 Score=26.03 Aligned_cols=43 Identities=12% Similarity=0.052 Sum_probs=29.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhcCChhhHHhhhhhhhhccCC
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLELNEDEIEDQCEDVIRFGHD 51 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~L~e~~~d~rc~~viRFGrd 51 (160)
++..|+.+|. ||.||..||...+.+.........+.--.|-++
T Consensus 11 i~~~~~~~d~--~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d 53 (109)
T 5pal_A 11 INKAISAFKD--PGTFDYKRFFHLVGLKGKTDAQVKEVFEILDKD 53 (109)
T ss_dssp HHHHHHHTCS--TTCCCHHHHHHHHTCTTCCHHHHHHHHHHHCTT
T ss_pred HHHHHHHhCC--CCcCcHHHHHHHHhhccCcHHHHHHHHHHHCCC
Confidence 5778999997 999999999999877544333333333334333
No 375
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=68.43 E-value=2.8 Score=29.18 Aligned_cols=26 Identities=19% Similarity=0.082 Sum_probs=23.0
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
-++..|+..|.++||.||..|+...+
T Consensus 96 ~l~~~F~~~D~d~~G~I~~~el~~~l 121 (166)
T 2mys_B 96 VIMGAFKVLDPDGKGSIKKSFLEELL 121 (166)
T ss_pred HHHHHHHHhCCCCCcceeHHHHHHHH
Confidence 45678999999999999999998875
No 376
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=68.40 E-value=2.4 Score=30.10 Aligned_cols=25 Identities=20% Similarity=0.231 Sum_probs=22.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 101 ~~~~f~~~D~d~~G~i~~~ef~~~~ 125 (190)
T 1fpw_A 101 LSWAFELYDLNHDGYITFDEMLTIV 125 (190)
T ss_dssp HHHHHHHHCSSCSSEEEHHHHHHHH
T ss_pred HHHHHHHhcCCCCCcCcHHHHHHHH
Confidence 4668999999999999999999874
No 377
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=68.39 E-value=10 Score=25.63 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=29.4
Q ss_pred hhhhhccCCCChhhhhhHHHHHH---HHHhhhcc-eEEEEEeCCc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYS---IAEKVKNF-AVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~k---ia~kvknf-avIYlvDi~~ 83 (160)
.+||-|+-.|-|.|.++=..|.+ ++++.+.- ..+..|++++
T Consensus 29 ~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~ 73 (142)
T 3ewl_A 29 YTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDE 73 (142)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSS
T ss_pred EEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecC
Confidence 35888999999999997666666 66655432 5566677664
No 378
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=68.36 E-value=2.7 Score=29.55 Aligned_cols=25 Identities=12% Similarity=0.381 Sum_probs=21.6
Q ss_pred chhHHhhccCCCCCCcccHHHHHHh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
=+...++..|+|+||.|+..|+..-
T Consensus 57 ev~~~i~~~D~dgDG~Idf~EF~~~ 81 (104)
T 3zwh_A 57 AFQKLMSNLDSNRDNEVDFQEYCVF 81 (104)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCcHHHHHHH
Confidence 3567899999999999999999763
No 379
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=68.30 E-value=2.6 Score=29.98 Aligned_cols=25 Identities=16% Similarity=0.145 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 101 ~~~~f~~~D~d~~G~I~~~E~~~~~ 125 (193)
T 1bjf_A 101 LKWAFSMYDLDGNGYISKAEMLEIV 125 (193)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHhhcCCCCCCeECHHHHHHHH
Confidence 4567999999999999999999875
No 380
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=68.29 E-value=1.9 Score=30.32 Aligned_cols=23 Identities=30% Similarity=0.352 Sum_probs=14.1
Q ss_pred hHHhhccCCCCCCcccHHHHHHh
Q psy4160 8 APFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
...++.+|.|+||.|+..||...
T Consensus 59 ~~i~~~~D~d~dG~I~~~EF~~~ 81 (110)
T 1iq3_A 59 SYIWELSDADCDGALTLPEFCAA 81 (110)
T ss_dssp HHHHHHHCSSSCSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCcCcHHHHHHH
Confidence 44556666666666666666654
No 381
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=68.17 E-value=3.3 Score=29.49 Aligned_cols=26 Identities=19% Similarity=0.166 Sum_probs=20.7
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
-++.-|+..|.++||.||..|+...+
T Consensus 99 ~l~~~F~~~D~d~~G~I~~~El~~~l 124 (183)
T 1dgu_A 99 KSHYAFRIFDFDDDGTLNREDLSRLV 124 (183)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 35667888899999999998887764
No 382
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=68.12 E-value=2.8 Score=31.39 Aligned_cols=25 Identities=12% Similarity=0.097 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+..|+|+||.||..|+...+
T Consensus 50 l~~~F~~~D~d~dG~I~~~El~~~l 74 (219)
T 3cs1_A 50 RIELFKKFDKNETGKLCYDEVYSGC 74 (219)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4578999999999999999998764
No 383
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=68.07 E-value=2.6 Score=30.64 Aligned_cols=25 Identities=16% Similarity=0.135 Sum_probs=20.6
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 109 ~~~~f~~~D~d~~G~I~~~E~~~~l 133 (207)
T 2d8n_A 109 LEWAFSLYDVDGNGTISKNEVLEIV 133 (207)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHhcCCCCCeEcHHHHHHHH
Confidence 4667888899999999999988765
No 384
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=67.94 E-value=2.5 Score=28.51 Aligned_cols=24 Identities=21% Similarity=0.397 Sum_probs=21.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+...++..|.|+||.|+..|+..-
T Consensus 54 v~~l~~~~D~d~dG~I~f~EF~~~ 77 (95)
T 1j55_A 54 VDKLLKDLDANGDAQVDFSEFIVF 77 (95)
T ss_dssp HHHHHHHHCSSSSSSEEHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHH
Confidence 567889999999999999999875
No 385
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=67.82 E-value=5.8 Score=25.96 Aligned_cols=28 Identities=18% Similarity=0.350 Sum_probs=23.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhcCChh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLELNED 36 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~L~e~ 36 (160)
+...|+.+| +||.||..||...+.+...
T Consensus 12 i~~~~~~~D--~~g~i~~~eF~~~~~~~~~ 39 (109)
T 3fs7_A 12 IESALSSCQ--AADSFNYKSFFSTVGLSSK 39 (109)
T ss_dssp HHHHHHHTC--STTCCCHHHHHHHHTCTTC
T ss_pred HHHHHHhcC--CCCcCcHHHHHHHHhcCCC
Confidence 567889998 8999999999998766443
No 386
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=67.80 E-value=2.4 Score=31.39 Aligned_cols=26 Identities=19% Similarity=0.411 Sum_probs=22.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++..|+..|.++||.||..||...+.
T Consensus 59 ~~~~f~~~D~d~dG~I~~~Ef~~~~~ 84 (211)
T 2ggz_A 59 IDQVYNTFDTNKDGFVDFLEFIAAVN 84 (211)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCeEeHHHHHHHHH
Confidence 46788999999999999999988763
No 387
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=67.59 E-value=2.8 Score=29.47 Aligned_cols=23 Identities=17% Similarity=0.268 Sum_probs=14.0
Q ss_pred HHhhccCCCCCCcccHHHHHHhh
Q psy4160 9 PFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 9 ~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
..|+..|.++||.||..|+...+
T Consensus 76 ~~F~~~D~d~~G~i~~~el~~~l 98 (167)
T 1gjy_A 76 QHFISFDSDRSGTVDPQELQKAL 98 (167)
T ss_dssp HHHHHHCTTCCSEECHHHHHHHH
T ss_pred HHHHHhCCCCCCcCCHHHHHHHH
Confidence 34566666666666666666553
No 388
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=67.40 E-value=3.3 Score=28.45 Aligned_cols=24 Identities=21% Similarity=0.279 Sum_probs=18.7
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
..-|+..|.++||.||..|+...+
T Consensus 86 ~~~F~~~D~d~~G~I~~~el~~~l 109 (148)
T 1exr_A 86 IEAFKVFDRDGNGLISAAELRHVM 109 (148)
T ss_dssp HHHHHHHSTTCSSCBCHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCCHHHHHHHH
Confidence 346788888888888888887764
No 389
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=67.38 E-value=3.2 Score=28.21 Aligned_cols=26 Identities=12% Similarity=0.134 Sum_probs=22.6
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
-.+..|+..|.++||.||..|....+
T Consensus 85 ~l~~~F~~~D~d~~G~I~~~el~~~l 110 (146)
T 2qac_A 85 ELIKMFAHFDNNCTGYLTKSQMKNIL 110 (146)
T ss_dssp HHHHHHHTTCTTCSSEEEHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 35678999999999999999998864
No 390
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=67.29 E-value=2.7 Score=28.82 Aligned_cols=24 Identities=17% Similarity=0.423 Sum_probs=21.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+...++..|+|+||.|+..|+..-
T Consensus 55 v~~l~~~~D~d~dG~I~f~EF~~~ 78 (99)
T 2y5i_A 55 VEKIMNDLDSNKDNEVDFNEFVVL 78 (99)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHH
Confidence 467889999999999999999875
No 391
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=67.18 E-value=2.5 Score=32.07 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=21.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.|+||.||..|+..++
T Consensus 53 l~~~F~~~D~d~~G~I~~~El~~~l 77 (220)
T 3sjs_A 53 IYQWFMGVDRDRSGTLEINELMMGQ 77 (220)
T ss_dssp HHHHHHHHCTTCCSSBCHHHHHHCC
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 3567999999999999999999875
No 392
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=67.15 E-value=3.6 Score=31.24 Aligned_cols=26 Identities=15% Similarity=0.378 Sum_probs=22.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
+...|+..|.|+||.||..||...+.
T Consensus 104 ~~~lf~~~D~d~~G~I~~~Ef~~~l~ 129 (229)
T 3dd4_A 104 AHFLFNAFDTDHNGAVSFEDFIKGLS 129 (229)
T ss_dssp HHHHHHTTCSSCCSSCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCeEeHHHHHHHHH
Confidence 45789999999999999999998753
No 393
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=66.99 E-value=19 Score=26.34 Aligned_cols=41 Identities=15% Similarity=0.008 Sum_probs=32.0
Q ss_pred hhhhhcc-CCCChhhhhhHHHHHHHHHhhhc-ceEEEEEeCCc
Q psy4160 43 EDVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFG-rd~dp~Cm~mDevL~kia~kvkn-favIYlvDi~~ 83 (160)
.+||-|. ..|-|.|..+=..|.+++++.+. =..++.|++++
T Consensus 36 ~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~ 78 (197)
T 1qmv_A 36 YVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDS 78 (197)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSC
T ss_pred eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3689999 88999999977788888887753 35667777765
No 394
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=66.78 E-value=2.9 Score=29.80 Aligned_cols=26 Identities=31% Similarity=0.395 Sum_probs=23.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
++..|+..|.++||.||..|+...+.
T Consensus 65 ~~~~f~~~D~d~~G~i~~~ef~~~~~ 90 (190)
T 2l2e_A 65 AEYVFNVFDADKNGYIDFKEFICALS 90 (190)
T ss_dssp HHHHHHHHCSSSTTCEEHHHHHHHHT
T ss_pred HHHHHHHhcCCCCCeEeHHHHHHHHH
Confidence 56689999999999999999998864
No 395
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=66.76 E-value=2.6 Score=27.00 Aligned_cols=25 Identities=16% Similarity=0.254 Sum_probs=22.1
Q ss_pred hhHHhhccC-CCCCC-cccHHHHHHhh
Q psy4160 7 IAPFLNKCD-ADDDH-LITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD-~~~D~-~is~~EW~~C~ 31 (160)
++..|+..| .++|| .||..|....+
T Consensus 11 l~~~F~~~D~~d~~G~~I~~~el~~~l 37 (93)
T 1k2h_A 11 LINVFHAHSGKEGDKYKLSKKELKDLL 37 (93)
T ss_dssp HHHHHHHHHTTSSCCSSCCHHHHHHHH
T ss_pred HHHHHHHHcccCCCcCccCHHHHHHHH
Confidence 567899999 69999 99999999875
No 396
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=66.33 E-value=12 Score=27.25 Aligned_cols=41 Identities=12% Similarity=0.055 Sum_probs=31.0
Q ss_pred hhhhhcc-CCCChhhhhhHHHHHHHHHhhh-cceEEEEEeCCc
Q psy4160 43 EDVIRFG-HDWDPTCMKMDEVLYSIAEKVK-NFAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFG-rd~dp~Cm~mDevL~kia~kvk-nfavIYlvDi~~ 83 (160)
.+||-|+ -.|-|.|..+=..|.+++++.+ +-+.++.|.+++
T Consensus 33 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~ 75 (192)
T 2h01_A 33 YVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDS 75 (192)
T ss_dssp EEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCC
Confidence 4689999 8899999987777888887764 235567777764
No 397
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=66.28 E-value=28 Score=25.08 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=32.5
Q ss_pred hhhhhcc-CCCChhhhhhHHHHHHHHHhhhc-ceEEEEEeCCc
Q psy4160 43 EDVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFG-rd~dp~Cm~mDevL~kia~kvkn-favIYlvDi~~ 83 (160)
..||-|+ -.|-|.|..+=..|.+++++.+. =..++.|+++.
T Consensus 33 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~ 75 (187)
T 1we0_A 33 WSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDT 75 (187)
T ss_dssp EEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCC
Confidence 3589999 88999999988888888887764 35667777765
No 398
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=66.05 E-value=2.7 Score=29.58 Aligned_cols=25 Identities=20% Similarity=0.372 Sum_probs=17.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
....++..|.|+||.|+..|+....
T Consensus 50 l~~i~~~~D~d~dG~id~~EF~~~m 74 (106)
T 1eh2_A 50 LGRVWELSDIDHDGMLDRDEFAVAM 74 (106)
T ss_dssp HHHHHHHHCSSCSSBCCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCcHHHHHHHH
Confidence 3456667777777777777777654
No 399
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=65.97 E-value=3.9 Score=28.10 Aligned_cols=26 Identities=12% Similarity=0.138 Sum_probs=22.6
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
-++..|+..|.++||.||..|....+
T Consensus 88 ~l~~~F~~~D~d~~G~I~~~el~~~l 113 (156)
T 1wdc_B 88 TIRNAFAMFDEQETKKLNIEYIKDLL 113 (156)
T ss_dssp HHHHHHHTTCTTCCSCEEHHHHHHHH
T ss_pred HHHHHHHHHCcCCCCccCHHHHHHHH
Confidence 35677999999999999999998875
No 400
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=65.72 E-value=3.5 Score=28.24 Aligned_cols=25 Identities=16% Similarity=0.187 Sum_probs=21.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 86 l~~~F~~~D~d~~G~I~~~el~~~l 110 (156)
T 1wdc_C 86 YMEAFKTFDREGQGFISGAELRHVL 110 (156)
T ss_dssp HHHHHHTTCSSSSSEEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 5667899999999999999998864
No 401
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=65.61 E-value=3.7 Score=28.30 Aligned_cols=25 Identities=24% Similarity=0.296 Sum_probs=20.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++.-|+..|.++||.||..|....+
T Consensus 81 l~~~F~~~D~d~~G~I~~~el~~~l 105 (143)
T 2obh_A 81 ILKAFKLFDDDETGKISFKNLKRVA 105 (143)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4567888999999999999988764
No 402
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=65.17 E-value=3.9 Score=34.14 Aligned_cols=23 Identities=22% Similarity=0.362 Sum_probs=11.2
Q ss_pred hHHhhccCCCCCCcccHHHHHHh
Q psy4160 8 APFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
...|+..|.|+||.||..|+...
T Consensus 385 ~~~~~~~D~d~~g~i~~~Ef~~~ 407 (484)
T 3nyv_A 385 DQVLDAVDFDKNGYIEYSEFVTV 407 (484)
T ss_dssp HHHHHHHTCCTTSEEEHHHHHHH
T ss_pred HHHHHHhCCCCCCeEeHHHHHHH
Confidence 34444555555555555555443
No 403
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=64.91 E-value=5.1 Score=29.32 Aligned_cols=25 Identities=16% Similarity=-0.028 Sum_probs=21.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+..|.++||.||..|+...+
T Consensus 128 l~~~F~~~D~d~~G~Is~~El~~~l 152 (196)
T 3dtp_E 128 IVNAFNLFDEGDGKCKEETLKRSLT 152 (196)
T ss_dssp HHHHHHTTCSSSSCCBHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 4567899999999999999998875
No 404
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=64.34 E-value=18 Score=27.52 Aligned_cols=41 Identities=15% Similarity=0.094 Sum_probs=31.0
Q ss_pred hhhhhcc-CCCChhhhhhHHHHHHHHHhhhc-ceEEEEEeCCc
Q psy4160 43 EDVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFG-rd~dp~Cm~mDevL~kia~kvkn-favIYlvDi~~ 83 (160)
-.||-|. -.|-|.|..+=..|.+++++.+. =+.++.|.+++
T Consensus 58 ~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~ 100 (220)
T 1zye_A 58 YLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDS 100 (220)
T ss_dssp EEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3588999 78999999987888888887642 35566676664
No 405
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=64.22 E-value=3.4 Score=30.29 Aligned_cols=26 Identities=23% Similarity=0.264 Sum_probs=21.5
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
-++..|+..|+++||.||..|+...+
T Consensus 83 ~l~~~F~~~D~d~dG~Is~~El~~~l 108 (188)
T 1s6i_A 83 NLVSAFSYFDKDGSGYITLDEIQQAC 108 (188)
T ss_dssp STHHHHHHTTTTCSSEEEHHHHHHTT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 35678889999999999999988764
No 406
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=64.13 E-value=3.2 Score=27.20 Aligned_cols=25 Identities=12% Similarity=0.183 Sum_probs=22.2
Q ss_pred hhHHhhccCC-CCCC-cccHHHHHHhh
Q psy4160 7 IAPFLNKCDA-DDDH-LITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~-~~D~-~is~~EW~~C~ 31 (160)
++..|+..|. ++|| .||..|....+
T Consensus 12 l~~~F~~~D~~d~dG~~I~~~El~~~l 38 (93)
T 1xk4_A 12 IIDVYHKYSLIKGNFHAVYRDDLKKLL 38 (93)
T ss_dssp HHHHHHHHHTSSSCTTCBCHHHHHHHH
T ss_pred HHHHHHHHhhcCCCcCeECHHHHHHHH
Confidence 4567899999 9999 99999999886
No 407
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=63.82 E-value=3.3 Score=31.33 Aligned_cols=25 Identities=24% Similarity=0.510 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.|+||.||..|+..-+
T Consensus 135 l~~~F~~~D~d~dG~Is~~El~~~l 159 (226)
T 2lvv_A 135 LTVMFDTMDKDGSLLLELQEFKEAL 159 (226)
T ss_dssp HHHHHHHHSCSSCCEECHHHHHHHH
T ss_pred HHHHHHHHcCCCCCeEcHHHHHHHH
Confidence 4567999999999999999999875
No 408
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=63.75 E-value=4.1 Score=28.45 Aligned_cols=25 Identities=8% Similarity=0.111 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+..|+++||.||..||...+
T Consensus 42 ~~~l~~~~D~~~~g~i~~~eF~~~~ 66 (165)
T 1k94_A 42 CRIMIAMLDRDHTGKMGFNAFKELW 66 (165)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 5678999999999999999998865
No 409
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=63.39 E-value=7.6 Score=28.35 Aligned_cols=25 Identities=20% Similarity=0.319 Sum_probs=22.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+.+|.++||.||..||...+
T Consensus 89 ~~~l~~~~D~d~~g~i~~~EF~~~~ 113 (191)
T 3k21_A 89 FDLLLDQIDSDGSGKIDYTEFIAAA 113 (191)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHH
Confidence 4678999999999999999999875
No 410
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=63.10 E-value=1.5 Score=31.43 Aligned_cols=24 Identities=8% Similarity=-0.011 Sum_probs=0.0
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
..-|++.|+|+||.||..||...+
T Consensus 30 ~~~f~~~D~d~dG~I~~~Ef~~~l 53 (143)
T 3a4u_B 30 FSQPGSMGLDKNTVHDQEHIMEHL 53 (143)
T ss_dssp ------------------------
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHH
Confidence 357899999999999999998764
No 411
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=62.52 E-value=3.9 Score=29.32 Aligned_cols=24 Identities=13% Similarity=0.390 Sum_probs=21.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+...++..|+|+||.|+..|+..-
T Consensus 67 v~~li~~~D~dgdG~Idf~EF~~~ 90 (113)
T 2lnk_A 67 FQKLMSNLDSNRDNEVDFQEYCVF 90 (113)
T ss_dssp HHHHHHHHCSSSSSCBCHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHH
Confidence 567899999999999999999874
No 412
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=62.47 E-value=13 Score=28.54 Aligned_cols=25 Identities=24% Similarity=0.199 Sum_probs=20.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+.+|.++||.||..|+...+
T Consensus 167 l~~~F~~~D~d~dG~I~~~Ef~~~l 191 (256)
T 2jul_A 167 LKWAFNLYDINKDGCITKEEMLAIM 191 (256)
T ss_dssp HHHHHHHTCCSSSSCBCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4567888899999999999888765
No 413
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=62.10 E-value=3 Score=27.72 Aligned_cols=25 Identities=12% Similarity=0.247 Sum_probs=21.7
Q ss_pred hhHHhhccC-CCCCC-cccHHHHHHhh
Q psy4160 7 IAPFLNKCD-ADDDH-LITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD-~~~D~-~is~~EW~~C~ 31 (160)
++.-|+..| .++|| .||..|+...+
T Consensus 12 l~~~F~~~D~~d~dG~~I~~~El~~~l 38 (92)
T 2kax_A 12 MVTTFHKYSGREGSKLTLSRKELKELI 38 (92)
T ss_dssp HHHHHHHHHTTSSCSSEEEHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCeeCHHHHHHHH
Confidence 456788899 99999 99999999875
No 414
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=61.38 E-value=7.7 Score=25.33 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=22.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhcCCh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLELNE 35 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~L~e 35 (160)
+...|+.+| +||.||..||...+.+..
T Consensus 12 ~~~~~~~~d--~~g~i~~~eF~~~~~~~~ 38 (109)
T 1bu3_A 12 VAAALKACE--AADSFNYKAFFAKVGLTA 38 (109)
T ss_dssp HHHHHHHTC--STTCCCHHHHHHHHTGGG
T ss_pred HHHHHHHhC--CCCcCcHHHHHHHHHcCh
Confidence 567888998 899999999999876543
No 415
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=61.29 E-value=5.5 Score=27.59 Aligned_cols=26 Identities=8% Similarity=0.098 Sum_probs=22.0
Q ss_pred hhHHhhccCC-CCCC-cccHHHHHHhhc
Q psy4160 7 IAPFLNKCDA-DDDH-LITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~-~~D~-~is~~EW~~C~~ 32 (160)
++.-|+..|. ++|| .||..|+...+.
T Consensus 14 l~~~F~~fD~~dgdG~~Is~~El~~~l~ 41 (113)
T 1xk4_C 14 IINTFHQYSVKLGHPDTLNQGEFKELVR 41 (113)
T ss_dssp HHHHHHHHHTTSSSTTSBCHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCEECHHHHHHHHH
Confidence 4567899995 9999 999999998763
No 416
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=61.16 E-value=5.6 Score=24.86 Aligned_cols=55 Identities=5% Similarity=0.095 Sum_probs=34.3
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCcccccccc---ccccccceeeeeeeCce
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKM---YELYDPCTCMFFFRNKH 107 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~m---yeL~dP~tvmFFfrnkH 107 (160)
|+=|+.+|-|.|.++-..|.+.. ..+..+|+++-|+..+. |....-+++ |.++++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~~------i~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~~ 60 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENRG------FDFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDLS 60 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT------CCCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTEE
T ss_pred EEEEcCCCChhHHHHHHHHHHCC------CCeEEEECCCCHHHHHHHHHhCCCccCEE--EECCEE
Confidence 34599999999999888877642 22357898876654433 333333443 445554
No 417
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=61.06 E-value=4 Score=28.68 Aligned_cols=24 Identities=17% Similarity=0.328 Sum_probs=21.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+...++..|.|+||.|+..|+..-
T Consensus 64 v~~li~~~D~d~dG~Idf~EF~~~ 87 (106)
T 2h2k_A 64 LDEKMKSLDVNQDSELKFNEYWRL 87 (106)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCcHHHHHHH
Confidence 567889999999999999999875
No 418
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=60.69 E-value=3.3 Score=26.13 Aligned_cols=25 Identities=16% Similarity=0.368 Sum_probs=21.8
Q ss_pred hhHHhhccCC-CCCC-cccHHHHHHhh
Q psy4160 7 IAPFLNKCDA-DDDH-LITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~-~~D~-~is~~EW~~C~ 31 (160)
++..|+..|+ ++|| .||..|....+
T Consensus 12 l~~~F~~~D~~d~~G~~i~~~el~~~l 38 (90)
T 1k8u_A 12 LVAIFHKYSGREGDKHTLSKKELKELI 38 (90)
T ss_dssp HHHHHHHHHTSSSCTTEEEHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCcCCHHHHHHHH
Confidence 4667999995 9999 99999999875
No 419
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=60.14 E-value=11 Score=26.16 Aligned_cols=40 Identities=13% Similarity=-0.147 Sum_probs=31.9
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDIT 82 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~ 82 (160)
.+||-|+-.|-|.|.++=..|.+++++.+.- ..|+.|+++
T Consensus 34 ~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d 74 (170)
T 2p5q_A 34 VLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCN 74 (170)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred EEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECC
Confidence 3588999999999999888899998887654 566677654
No 420
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=60.11 E-value=4.2 Score=26.39 Aligned_cols=26 Identities=15% Similarity=0.298 Sum_probs=22.4
Q ss_pred hhHHhhccC-CCCCC-cccHHHHHHhhc
Q psy4160 7 IAPFLNKCD-ADDDH-LITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD-~~~D~-~is~~EW~~C~~ 32 (160)
++..|+..| .++|| .||..|....+.
T Consensus 15 l~~~F~~~Dd~d~~G~~I~~~el~~~l~ 42 (99)
T 1qls_A 15 LIAIFQKHAGRDGNNTKISKTEFLIFMN 42 (99)
T ss_dssp HHHHHHHHHTTSSCTTCBCHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCcCeeCHHHHHHHHH
Confidence 456788897 99999 999999999864
No 421
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=60.03 E-value=3.9 Score=28.73 Aligned_cols=25 Identities=8% Similarity=0.017 Sum_probs=21.6
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+.-|+..|.++||.||..|-...+
T Consensus 24 ~~~~F~~~D~d~dG~Is~~el~~~l 48 (110)
T 1iq3_A 24 YVNQFRSLQPDPSSFISGSVAKNFF 48 (110)
T ss_dssp HHHHHHHHCCSSSSEEEHHHHHHHC
T ss_pred HHHHHHHHCCCCCCeEcHHHHHHHH
Confidence 3456999999999999999998873
No 422
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=59.99 E-value=4.8 Score=30.50 Aligned_cols=25 Identities=24% Similarity=0.224 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+.+|.|+||.||..|+...+
T Consensus 140 l~~~F~~~D~d~dG~Is~~E~~~~l 164 (229)
T 3dd4_A 140 LNWAFNLYDINKDGYITKEEMLDIM 164 (229)
T ss_dssp HHHHHHHHCTTCSSCCBHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeECHHHHHHHH
Confidence 5678999999999999999998875
No 423
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=59.85 E-value=5 Score=30.40 Aligned_cols=26 Identities=15% Similarity=0.193 Sum_probs=22.3
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
+...|+.+|.++||.||..|+..++.
T Consensus 89 ~~~l~~~~D~d~dg~I~~~EF~~~~~ 114 (220)
T 3sjs_A 89 ALRMMRIFDTDFNGHISFYEFMAMYK 114 (220)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 45688999999999999999998753
No 424
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=59.58 E-value=8.8 Score=26.87 Aligned_cols=23 Identities=4% Similarity=0.092 Sum_probs=20.2
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+.-|+..|. +||.||..|-...|
T Consensus 18 ~~~F~~~D~-~dG~Is~~el~~~l 40 (106)
T 1eh2_A 18 DAIFDSLSP-VNGFLSGDKVKPVL 40 (106)
T ss_dssp HHHHTTSCC-SSSCCBHHHHHHHH
T ss_pred HHHHHHhCC-CCCeEcHHHHHHHH
Confidence 456899999 99999999998874
No 425
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=59.48 E-value=8.8 Score=32.44 Aligned_cols=24 Identities=29% Similarity=0.256 Sum_probs=12.3
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+..|+..|.|+||.||..|+...+
T Consensus 438 ~~~F~~~D~d~dG~Is~~El~~~l 461 (504)
T 3q5i_A 438 RRAFNLFDTDKSGKITKEELANLF 461 (504)
T ss_dssp HHHHHHHCTTCCSEECHHHHHHHT
T ss_pred HHHHHHhcCCCCCcCcHHHHHHHH
Confidence 334555555555555555555543
No 426
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=59.45 E-value=3.8 Score=28.95 Aligned_cols=21 Identities=14% Similarity=0.303 Sum_probs=10.8
Q ss_pred hHHhhccCCCCCCcccHHHHH
Q psy4160 8 APFLNKCDADDDHLITLKEWA 28 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~ 28 (160)
...|+..|.++||.||..|+.
T Consensus 50 ~~l~~~~D~~~~g~i~~~eF~ 70 (173)
T 1alv_A 50 RSMVAVMDSDTTGKLGFEEFK 70 (173)
T ss_dssp HHHHHHHCTTCSSSBCHHHHH
T ss_pred HHHHHHHcCCCCCccCHHHHH
Confidence 344555555555555555543
No 427
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=59.10 E-value=4.9 Score=29.65 Aligned_cols=28 Identities=18% Similarity=0.133 Sum_probs=21.6
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhhcC
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCLEL 33 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~~L 33 (160)
-++..|+..|.++||.||..|+...+..
T Consensus 130 ~l~~~F~~~D~d~~G~Is~~El~~~l~~ 157 (197)
T 3pm8_A 130 VCLIPFKFFDIDGNGKISVEELKRIFGR 157 (197)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHC-
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 4566788888888888888888887643
No 428
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=58.95 E-value=5.7 Score=32.52 Aligned_cols=27 Identities=4% Similarity=0.158 Sum_probs=24.2
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
.++..|...|+|+||.||..|+..++.
T Consensus 123 ~l~~~F~~~D~d~dG~Is~~El~~~L~ 149 (323)
T 1ij5_A 123 ILRQLFLSSAVSGSGKFSFQDLKQVLA 149 (323)
T ss_dssp HHHHHHTSSSSTTSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcHHHHHHHHH
Confidence 467889999999999999999999863
No 429
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=58.78 E-value=30 Score=25.22 Aligned_cols=41 Identities=20% Similarity=0.200 Sum_probs=32.5
Q ss_pred hhhhhcc-CCCChhhhhhHHHHHHHHHhhhc-ceEEEEEeCCc
Q psy4160 43 EDVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFG-rd~dp~Cm~mDevL~kia~kvkn-favIYlvDi~~ 83 (160)
.+||-|+ -.|-|.|..+=..|.+++++.+. =..++.|+++.
T Consensus 47 ~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~ 89 (195)
T 2bmx_A 47 WRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDS 89 (195)
T ss_dssp EEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSC
T ss_pred cEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3589999 88999999988888888888764 35667777765
No 430
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=56.78 E-value=6.2 Score=25.44 Aligned_cols=56 Identities=13% Similarity=0.140 Sum_probs=36.0
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCC--ccccccccc-cccccceeeeeeeCcee
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT--KVPDFNKMY-ELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~--~Vpdfn~my-eL~dP~tvmFFfrnkHm 108 (160)
|+=|+.+|-|.|.++-..|.+.. .....+|++ .-+++.+.+ ....-+++ |.+++++
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~~------i~~~~vdv~~~~~~~l~~~~~~~~~vP~l--~~~g~~i 66 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKKG------VKYTDIDASTSLRQEMVQRANGRNTFPQI--FIGDYHV 66 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHHT------CCEEEECSCHHHHHHHHHHHHSSCCSCEE--EETTEEC
T ss_pred EEEEECCCChhHHHHHHHHHHcC------CCcEEEECCHHHHHHHHHHhCCCCCcCEE--EECCEEE
Confidence 45599999999999877776642 234578888 455566656 55444453 4455543
No 431
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=56.78 E-value=7.1 Score=28.77 Aligned_cols=78 Identities=15% Similarity=0.280 Sum_probs=45.0
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCcc---cc----ccccccccccceeeeeeeCceeEEecCCCCC
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKV---PD----FNKMYELYDPCTCMFFFRNKHIMIDLGTGNN 117 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~V---pd----fn~myeL~dP~tvmFFfrnkHm~vD~GTgnn 117 (160)
|+=|+.+|-|.|.++-.+|.+... .| ..+|+++- |+ +.+.|....-+++ |.++++| | ..
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~~i---~~---~~vdId~~~~~~~~~~~L~~~~g~~tvP~i--fi~G~~i----g--G~ 116 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDMNV---NY---KVVELDLLEYGNQFQDALYKMTGERTVPRI--FVNGTFI----G--GA 116 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHTC---CC---EEEEGGGCTTHHHHHHHHHHHHSCCCSCEE--EETTEEE----E--SH
T ss_pred EEEEECCCChhHHHHHHHHHHcCC---Ce---EEEECccCcCCHHHHHHHHHHhCCCCcCeE--EECCEEE----e--Cc
Confidence 333999999999998888887642 22 45777765 43 4445555444453 4566654 1 11
Q ss_pred ceeeeecCChhHHHHHHHHH
Q psy4160 118 NKINWALEDKQEMIDIVETV 137 (160)
Q Consensus 118 nKin~~~~~kqe~iDiie~i 137 (160)
..+.. +..+.+|..+++.+
T Consensus 117 d~l~~-l~~~g~L~~~L~~~ 135 (146)
T 2ht9_A 117 TDTHR-LHKEGKLLPLVHQC 135 (146)
T ss_dssp HHHHH-HHHTTCHHHHHHHT
T ss_pred hHHHH-HHHcChHHHHHHHc
Confidence 11111 23445666666654
No 432
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=55.66 E-value=13 Score=24.13 Aligned_cols=28 Identities=14% Similarity=0.144 Sum_probs=23.2
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhcCChh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLELNED 36 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~L~e~ 36 (160)
+...|+.+| +||.||..|+...+.+...
T Consensus 12 ~~~~~~~~d--~~g~i~~~ef~~~~~~~~~ 39 (110)
T 1pva_A 12 IKKALDAVK--AEGSFNHKKFFALVGLKAM 39 (110)
T ss_dssp HHHHHHHTC--STTCCCHHHHHHHHTCTTS
T ss_pred HHHHHHhcC--CCCcCcHHHHHHHHccCcc
Confidence 567888888 8999999999998766543
No 433
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=55.34 E-value=34 Score=24.54 Aligned_cols=38 Identities=11% Similarity=0.090 Sum_probs=29.7
Q ss_pred hhhhhccCCC-ChhhhhhHHHHHHHHHhhhcceEEEEEeCC
Q psy4160 43 EDVIRFGHDW-DPTCMKMDEVLYSIAEKVKNFAVIYLVDIT 82 (160)
Q Consensus 43 ~~viRFGrd~-dp~Cm~mDevL~kia~kvknfavIYlvDi~ 82 (160)
..||-|+..| -|.|..+=..|.+++++ +++ .++.|+++
T Consensus 46 ~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~~v-~vv~Is~D 84 (175)
T 1xvq_A 46 SVLLNIFPSVDTPVCATSVRTFDERAAA-SGA-TVLCVSKD 84 (175)
T ss_dssp CEEEEECSCCCSSCCCHHHHHHHHHHHH-TTC-EEEEEESS
T ss_pred EEEEEEEeCCCCchHHHHHHHHHHHHhh-cCC-EEEEEECC
Confidence 3589999998 89999988888888887 554 45666666
No 434
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=55.16 E-value=9.5 Score=32.15 Aligned_cols=23 Identities=22% Similarity=0.354 Sum_probs=11.0
Q ss_pred hHHhhccCCCCCCcccHHHHHHh
Q psy4160 8 APFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
...|+..|+|+||.||..||...
T Consensus 393 ~~~~~~~D~d~~G~I~~~EF~~~ 415 (494)
T 3lij_A 393 DAILGAADFDRNGYIDYSEFVTV 415 (494)
T ss_dssp HHHHHHHCTTCSSSEEHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHH
Confidence 33444445555555555554443
No 435
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=55.07 E-value=3.2 Score=29.18 Aligned_cols=23 Identities=22% Similarity=0.442 Sum_probs=20.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHH
Q psy4160 7 IAPFLNKCDADDDHLITLKEWAR 29 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~ 29 (160)
+...++..|+|+||.|+..|+..
T Consensus 55 v~~~i~~~D~dgDG~Idf~EF~~ 77 (101)
T 3nso_A 55 YNKFMSVLDTNKDCEVDFVEYVR 77 (101)
T ss_dssp HHHHHHHHHHCCCSCEEHHHHHH
T ss_pred HHHHHHHhCCCCCCCCcHHHHHH
Confidence 45778999999999999999975
No 436
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=54.44 E-value=7.2 Score=27.49 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=21.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++..|+..|.++||.||..|+...+
T Consensus 79 ~~~~F~~~D~d~~G~i~~~el~~~l 103 (173)
T 1alv_A 79 WQAIYKQFDVDRSGTIGSSELPGAF 103 (173)
T ss_dssp HHHHHHHHCTTCCSSBCTTTHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 3567899999999999999998875
No 437
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=54.32 E-value=5 Score=28.34 Aligned_cols=24 Identities=29% Similarity=0.407 Sum_probs=21.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+...++..|.|+||.|+..||...
T Consensus 82 i~~~~~~~D~d~dG~I~~~EF~~~ 105 (123)
T 2kld_A 82 IEAIFTKYDQDGDQELTEHEHQQM 105 (123)
T ss_dssp HHHHHHHHSSSSCCEECSHHHHHC
T ss_pred HHHHHHHHcCCCCCcCcHHHHHHH
Confidence 456789999999999999999875
No 438
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=53.80 E-value=39 Score=24.51 Aligned_cols=39 Identities=10% Similarity=-0.188 Sum_probs=29.7
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDI 81 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi 81 (160)
.+||-|+-.|-|+|.++=..|.+++++.+.- ..|..|.+
T Consensus 48 ~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~ 87 (187)
T 3dwv_A 48 PLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPS 87 (187)
T ss_dssp CEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEB
T ss_pred EEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEEC
Confidence 3588999999999999888899998886653 44444443
No 439
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=53.30 E-value=13 Score=24.19 Aligned_cols=26 Identities=23% Similarity=0.404 Sum_probs=21.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhcCC
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLELN 34 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~L~ 34 (160)
+...|+.+| +||.||..||...+.+.
T Consensus 11 ~~~~~~~~d--~~g~i~~~eF~~~~~~~ 36 (108)
T 1rro_A 11 IAAALQECQ--DPDTFEPQKFFQTSGLS 36 (108)
T ss_dssp HHHHHHHTC--STTCCCHHHHHHHHSGG
T ss_pred HHHHHHHcc--CCCCcCHHHHHHHHhcC
Confidence 567788888 89999999999876543
No 440
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=52.63 E-value=6.4 Score=33.28 Aligned_cols=25 Identities=20% Similarity=0.280 Sum_probs=21.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+..|+..|+|+||.||..|+...+
T Consensus 357 l~~~F~~~D~d~dG~I~~~El~~~l 381 (504)
T 3q5i_A 357 LTDIFKKLDKNGDGQLDKKELIEGY 381 (504)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHeeCCCCCCeEcHHHHHHHH
Confidence 3567999999999999999998765
No 441
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=52.19 E-value=5.5 Score=29.92 Aligned_cols=25 Identities=24% Similarity=0.327 Sum_probs=16.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
....++..|.|+||.|+..|+....
T Consensus 86 l~~I~~~~D~d~dG~Ld~~EF~~am 110 (139)
T 2jq6_A 86 LGKIWKLADVDKDGLLDDEEFALAN 110 (139)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 3455666777777777777776654
No 442
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=51.98 E-value=5.9 Score=29.43 Aligned_cols=29 Identities=17% Similarity=0.210 Sum_probs=23.0
Q ss_pred hHHhhccCCCCCCcccHHHHHHhhcCChh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCLELNED 36 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~~L~e~ 36 (160)
...++.+|.|+||.|+..|++...+|-+-
T Consensus 69 ~~Iw~laD~d~dG~Ld~~EF~~aM~Li~~ 97 (121)
T 3fia_A 69 AQIWALADMNNDGRMDQVEFSIAMKLIKL 97 (121)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHHHHHHHH
Confidence 45677899999999999999987655443
No 443
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=51.80 E-value=23 Score=24.79 Aligned_cols=40 Identities=13% Similarity=0.143 Sum_probs=31.2
Q ss_pred hhhhhccCCC-ChhhhhhHHHHHHHHHhhhcceEEEEEeCCc
Q psy4160 43 EDVIRFGHDW-DPTCMKMDEVLYSIAEKVKNFAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFGrd~-dp~Cm~mDevL~kia~kvknfavIYlvDi~~ 83 (160)
..||-|+..| -|.|..+=..|.+++++.++ ..++.|++++
T Consensus 46 ~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~-~~vv~is~d~ 86 (167)
T 2jsy_A 46 VTIISVIPSIDTGVCDAQTRRFNEEAAKLGD-VNVYTISADL 86 (167)
T ss_dssp CEEEEECSCSTTSHHHHTHHHHHHHHHHHSS-CEEEEEECSS
T ss_pred eEEEEEecCCCCCchHHHHHHHHHHHHHcCC-CEEEEEECCC
Confidence 3589999998 99999988888888887744 4556666664
No 444
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=51.77 E-value=6.3 Score=33.24 Aligned_cols=25 Identities=12% Similarity=0.211 Sum_probs=22.0
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++.-|+..|+|+||.||..|+...+
T Consensus 348 l~~~F~~~D~d~dG~I~~~El~~~l 372 (494)
T 3lij_A 348 LTDIFRHIDKNGDGQLDRQELIDGY 372 (494)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHTT
T ss_pred HHHHHHHhCcCCCCeEcHHHHHHHH
Confidence 3567999999999999999998875
No 445
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=51.75 E-value=14 Score=24.00 Aligned_cols=26 Identities=23% Similarity=0.323 Sum_probs=21.5
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhcCC
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLELN 34 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~L~ 34 (160)
+...|+..| +||.||..||...+.+.
T Consensus 11 ~~~l~~~~d--~~g~i~~~eF~~~~~~~ 36 (108)
T 2pvb_A 11 VAAALAACS--AADSFKHKEFFAKVGLA 36 (108)
T ss_dssp HHHHHHHTC--STTCCCHHHHHHHHTGG
T ss_pred HHHHHHHhC--CCCcCcHHHHHHHHhCC
Confidence 567888888 89999999999986543
No 446
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=51.37 E-value=7.1 Score=29.97 Aligned_cols=25 Identities=24% Similarity=0.348 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...|+..|.|+||.||..|+...+
T Consensus 131 ~~~~f~~~D~d~dG~I~~~Ef~~~l 155 (256)
T 2jul_A 131 AHFLFNAFDADGNGAIHFEDFVVGL 155 (256)
T ss_dssp HHHHHHHSSCSCCSEECSHHHHHHH
T ss_pred HHHHHHHhccCCCCcCcHHHHHHHH
Confidence 5678999999999999999999875
No 447
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=51.31 E-value=4.5 Score=29.76 Aligned_cols=22 Identities=18% Similarity=0.336 Sum_probs=15.4
Q ss_pred hHHhhccCCCCCCcccHHHHHHh
Q psy4160 8 APFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
..+++..| |+||+||..|+..=
T Consensus 123 ~~l~~~~d-d~dG~I~~~EF~~~ 144 (176)
T 2lhi_A 123 DDMLREVS-DGSGEINIQQFAAL 144 (176)
T ss_dssp HHHHHHHH-TTSSCBCTTHHHHH
T ss_pred HHHHHhhc-CCCCeEeHHHHHHH
Confidence 45666677 77777777777763
No 448
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=51.27 E-value=15 Score=23.78 Aligned_cols=27 Identities=11% Similarity=0.160 Sum_probs=22.4
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhcCCh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLELNE 35 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~L~e 35 (160)
+...|+..| +||.||..|+..-+.+..
T Consensus 11 ~~~~~~~~d--~~g~i~~~eF~~~~~~~~ 37 (109)
T 1rwy_A 11 IKKAIGAFT--AADSFDHKKFFQMVGLKK 37 (109)
T ss_dssp HHHHHHTTC--STTCCCHHHHHHHHTGGG
T ss_pred HHHHHHHcC--CCCcEeHHHHHHHHhcCc
Confidence 567888988 899999999999876543
No 449
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=51.14 E-value=36 Score=23.45 Aligned_cols=41 Identities=10% Similarity=0.092 Sum_probs=29.9
Q ss_pred hhhhhcc-CCCChhhhhhHHHHHHHHHhhhc-ceEEEEEeCCc
Q psy4160 43 EDVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFG-rd~dp~Cm~mDevL~kia~kvkn-favIYlvDi~~ 83 (160)
..||-|. -.|-|.|..+=..|.+++++.+. =..++.|++++
T Consensus 38 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~ 80 (160)
T 1xvw_A 38 NVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGP 80 (160)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCC
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCC
Confidence 3688895 99999999977778887777643 25556666654
No 450
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=50.43 E-value=20 Score=24.77 Aligned_cols=40 Identities=10% Similarity=-0.192 Sum_probs=30.7
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDIT 82 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~ 82 (160)
.+||-|+-.|-|.|..+=..|.+++++.+.- ..+..|+++
T Consensus 33 ~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d 73 (169)
T 2v1m_A 33 VCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCN 73 (169)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred EEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 3588999999999998888888888876652 555666654
No 451
>2zci_A Phosphoenolpyruvate carboxykinase [GTP], phosphoenolpyruvate; GTP-dependent, signaling protein, lyase; 2.30A {Corynebacterium glutamicum}
Probab=50.06 E-value=9.1 Score=35.99 Aligned_cols=37 Identities=38% Similarity=0.486 Sum_probs=29.7
Q ss_pred EecCCCCCceeeeecCChhHHHHHHHHHhhccccCCeeEECCC
Q psy4160 110 IDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRGLVVSPK 152 (160)
Q Consensus 110 vD~GTgnnnKin~~~~~kqe~iDiie~iyrga~kGk~iv~sP~ 152 (160)
-|.|..|| --+.+|+...+...|+|.||||.+-|-|.
T Consensus 95 ~dagptnn------w~~p~e~~~~l~~~f~G~M~GRTMYViPf 131 (610)
T 2zci_A 95 EDAGPTNN------WAPPQAMKDEMSKHYAGSMKGRTMYVVPF 131 (610)
T ss_dssp TTTCTTSC------CCCHHHHHHHHHHHHTTTTTTSEEEEEEE
T ss_pred hhcCCCcC------ccCHHHHHHHHHHhCCcccCCCEEEEEee
Confidence 35555554 24678999999999999999999988775
No 452
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=48.47 E-value=7.6 Score=32.57 Aligned_cols=23 Identities=22% Similarity=0.472 Sum_probs=19.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHH
Q psy4160 7 IAPFLNKCDADDDHLITLKEWAR 29 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~ 29 (160)
++.-|+..|+|+||.||..|+..
T Consensus 333 l~~~F~~~D~d~dG~I~~~El~~ 355 (486)
T 3mwu_A 333 LTEIFRKLDTNNDGMLDRDELVR 355 (486)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHH
T ss_pred HHHHHHHhCCCCCceeeHHHHHH
Confidence 35679999999999999999943
No 453
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=48.44 E-value=49 Score=26.54 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=31.0
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhc-ceEEEEEeCCcc
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITKV 84 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvkn-favIYlvDi~~V 84 (160)
+++-|.-+|-|.|...=..|.+++++.++ -+.++.|+++++
T Consensus 37 VL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~ 78 (249)
T 3a2v_A 37 VLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSV 78 (249)
T ss_dssp EEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCH
T ss_pred EEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCH
Confidence 35578999999999977777777776654 366778888764
No 454
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=48.31 E-value=6.3 Score=27.58 Aligned_cols=59 Identities=8% Similarity=0.261 Sum_probs=36.1
Q ss_pred hhhccCCCChhhhhh-HHHHHHHHHhhhcceEEEEEeCCcccc-------ccccccccccceeeeeeeCcee
Q psy4160 45 VIRFGHDWDPTCMKM-DEVLYSIAEKVKNFAVIYLVDITKVPD-------FNKMYELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 45 viRFGrd~dp~Cm~m-DevL~kia~kvknfavIYlvDi~~Vpd-------fn~myeL~dP~tvmFFfrnkHm 108 (160)
|+=|+.+|=|.|.++ -.+|.+... .-.....+|+++-|+ ..+.|....-++ +|.++++|
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~--vfi~g~~i 93 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPN--IYINGKHI 93 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCE--EEETTEEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCE--EEECCEEE
Confidence 556999999999997 555544331 113456789887763 333444433334 36677765
No 455
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=47.95 E-value=8.1 Score=32.40 Aligned_cols=26 Identities=19% Similarity=0.213 Sum_probs=20.4
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
=+...|+..|.|+||.||..||...+
T Consensus 382 ~~~~~~~~~D~d~dG~I~~~Ef~~~~ 407 (486)
T 3mwu_A 382 QIDSLMPLLDMDGSGSIEYSEFIASA 407 (486)
T ss_dssp HHHHHHHHHCTTCCSSBCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence 35677888888888888888887654
No 456
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=53.49 E-value=3.9 Score=28.51 Aligned_cols=42 Identities=19% Similarity=0.172 Sum_probs=29.8
Q ss_pred hhhhhccCCCChhhhhhHHHHHH-HHHhhh--cceEEEEEeCCcc
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYS-IAEKVK--NFAVIYLVDITKV 84 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~k-ia~kvk--nfavIYlvDi~~V 84 (160)
..+|-|+-.|-|.|.++-..|.+ ++++.+ .-..++.|++++-
T Consensus 35 ~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~ 79 (159)
T 2ls5_A 35 VVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEP 79 (159)
Confidence 35889999999999998888887 766554 2344555665543
No 457
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=47.10 E-value=23 Score=25.61 Aligned_cols=40 Identities=3% Similarity=-0.165 Sum_probs=31.6
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDIT 82 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~ 82 (160)
.+||-|+-.|-|.|.++=..|.+++++.++- ..|+.|+++
T Consensus 51 ~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d 91 (181)
T 2p31_A 51 VSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCN 91 (181)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred EEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECc
Confidence 4589999999999998888888888887653 566667654
No 458
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=46.88 E-value=7.9 Score=28.48 Aligned_cols=27 Identities=11% Similarity=0.370 Sum_probs=22.0
Q ss_pred hHHhhccCCCCCCcccHHHHHHhhcCChh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCLELNED 36 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~~L~e~ 36 (160)
+.-|+..| +||.||..|...|+|+.+.
T Consensus 31 ~~~F~~~D--~dG~I~~~el~~~lg~~~~ 57 (179)
T 3a8r_A 31 EKRFNQLQ--VDGVLLRSRFGKCIGMDGS 57 (179)
T ss_dssp HHHHHHHC--BTTBEEGGGHHHHHTCCSC
T ss_pred HHHHhccC--CCCCCcHHHHHHHHCCCCc
Confidence 34577788 8999999999999987643
No 459
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=46.39 E-value=14 Score=23.92 Aligned_cols=26 Identities=19% Similarity=0.335 Sum_probs=22.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhcCC
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLELN 34 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~L~ 34 (160)
+...|+.+| +||.|+..|+...+.+.
T Consensus 11 ~~~l~~~~d--~~g~i~~~eF~~~~~~~ 36 (108)
T 2kyc_A 11 IAAALRDCQ--APDSFSPKKFFQISGMS 36 (108)
T ss_dssp HHHHHTTSC--STTTCCHHHHHHHHTCT
T ss_pred HHHHHHHcC--CCCcCCHHHHHHHHhhC
Confidence 567888888 89999999999987654
No 460
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=46.29 E-value=17 Score=21.93 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=26.0
Q ss_pred hhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCcccccc
Q psy4160 46 IRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFN 88 (160)
Q Consensus 46 iRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn 88 (160)
+=|+.+|-|.|.++-..|.+. + .....+|+++-|+.-
T Consensus 4 ~~y~~~~C~~C~~~~~~l~~~-----~-i~~~~~di~~~~~~~ 40 (75)
T 1r7h_A 4 TLYTKPACVQCTATKKALDRA-----G-LAYNTVDISLDDEAR 40 (75)
T ss_dssp EEEECTTCHHHHHHHHHHHHT-----T-CCCEEEETTTCHHHH
T ss_pred EEEeCCCChHHHHHHHHHHHc-----C-CCcEEEECCCCHHHH
Confidence 448999999999987777654 2 234567888766533
No 461
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=45.85 E-value=5.4 Score=28.89 Aligned_cols=56 Identities=16% Similarity=0.157 Sum_probs=33.6
Q ss_pred hHHhhccCC--CCCCcccHHHHHHhh---cCC--hhhHHhhhhhhhhccCCCChhhhhhHHHHHHHHH
Q psy4160 8 APFLNKCDA--DDDHLITLKEWARCL---ELN--EDEIEDQCEDVIRFGHDWDPTCMKMDEVLYSIAE 68 (160)
Q Consensus 8 ~~Ff~~CD~--~~D~~is~~EW~~C~---~L~--e~~~d~rc~~viRFGrd~dp~Cm~mDevL~kia~ 68 (160)
+.-|+..|+ |+||.||..|...++ |+. +.++.. ++..-. .+.-....+|-|.-.+.
T Consensus 12 re~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~----~~~~d~-~~~g~i~f~eFl~~~~~ 74 (159)
T 3i5g_C 12 REVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQ----HGGTKK-MGEKAYKLEEILPIYEE 74 (159)
T ss_dssp HHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHT----TTCCSS-TTSCEECHHHHHHHHHH
T ss_pred HHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHH----HHcccc-cCCCcccHHHHHHHHHH
Confidence 445788886 899999999999885 332 333332 222211 22345666776665544
No 462
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=45.71 E-value=8.5 Score=26.74 Aligned_cols=24 Identities=21% Similarity=0.211 Sum_probs=20.1
Q ss_pred hhHHhhccCCCCCCcccHHHHHHh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
++.-|+..|.+++|.||..|...-
T Consensus 85 l~~aF~~~D~d~~G~I~~~El~~~ 108 (148)
T 2lmt_A 85 MREAFKIFDRDGDGFISPAELRFV 108 (148)
T ss_dssp HHHHHHHHHSSCSSEECHHHHHHH
T ss_pred HHHHHHHHCCCCcCcCcHHHHHHH
Confidence 456689999999999999998765
No 463
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=45.17 E-value=10 Score=27.97 Aligned_cols=24 Identities=8% Similarity=0.051 Sum_probs=19.8
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+...++..| ++||.||..||..++
T Consensus 117 ~~~l~~~~d-d~dG~I~~~EF~~~~ 140 (174)
T 2i7a_A 117 LHLVTLRYS-DSVGRVSFPSLVCFL 140 (174)
T ss_dssp HHHHHHHHS-CTTSEECHHHHHHHH
T ss_pred HHHHHHHHc-CCCCeEcHHHHHHHH
Confidence 456778888 899999999998874
No 464
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=44.83 E-value=22 Score=25.85 Aligned_cols=40 Identities=10% Similarity=-0.174 Sum_probs=31.4
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDIT 82 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~ 82 (160)
.+||-|+-.|-|.|..+=..|.+++++.++- ..|+.|+++
T Consensus 50 ~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 90 (190)
T 2vup_A 50 PLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCN 90 (190)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECC
T ss_pred EEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcC
Confidence 3588999999999988888888888887653 556667665
No 465
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=44.82 E-value=12 Score=26.44 Aligned_cols=24 Identities=4% Similarity=0.119 Sum_probs=20.6
Q ss_pred hHHhhccCCCCCCc-ccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHL-ITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~-is~~EW~~C~ 31 (160)
...|+..|.++||. ||..||...+
T Consensus 63 ~~l~~~~D~d~~G~~I~~~EF~~~~ 87 (183)
T 1dgu_A 63 ERICRVFSTSPAKDSLSFEDFLDLL 87 (183)
T ss_dssp HHHHHHHSCSSSSCCCCHHHHHHHH
T ss_pred HHHHHHhCCCCCCCEecHHHHHHHH
Confidence 46788889999999 9999998875
No 466
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=43.84 E-value=14 Score=24.84 Aligned_cols=56 Identities=13% Similarity=0.091 Sum_probs=34.1
Q ss_pred hhhccC-----CCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccc-c---ccccccceeeeeeeCcee
Q psy4160 45 VIRFGH-----DWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNK-M---YELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 45 viRFGr-----d~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~-m---yeL~dP~tvmFFfrnkHm 108 (160)
|+=|.. +|=|.|.++-.+|.+.. .....+|+++-|..-+ + +....-++ +|.+++||
T Consensus 19 vvvf~~g~~~~~~C~~C~~~~~~L~~~~------i~~~~vdi~~~~~~~~~l~~~~g~~~vP~--v~i~g~~i 83 (105)
T 2yan_A 19 VMLFMKGNKQEAKCGFSKQILEILNSTG------VEYETFDILEDEEVRQGLKAYSNWPTYPQ--LYVKGELV 83 (105)
T ss_dssp EEEEESBCSSSBCTTHHHHHHHHHHHHT------CCCEEEEGGGCHHHHHHHHHHHTCCSSCE--EEETTEEE
T ss_pred EEEEEecCCCCCCCccHHHHHHHHHHCC------CCeEEEECCCCHHHHHHHHHHHCCCCCCe--EEECCEEE
Confidence 334887 89999999888887653 2235678887665322 2 22222233 35667665
No 467
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=43.64 E-value=10 Score=34.06 Aligned_cols=25 Identities=28% Similarity=0.312 Sum_probs=22.7
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++.-|+..|.|+||.||..|...+|
T Consensus 304 LREaF~~fDkDgdG~IS~eELk~aL 328 (440)
T 3u0k_A 304 FKEAFSLFDKDGDGTITTKELGTVM 328 (440)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHHcCCCCCEECHHHHHHHH
Confidence 5677999999999999999999886
No 468
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=42.91 E-value=9.2 Score=31.28 Aligned_cols=24 Identities=17% Similarity=0.290 Sum_probs=19.8
Q ss_pred hHHhhccCCCCCCcccHHHHHHhh
Q psy4160 8 APFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
...|+..|.++||.||..|+...+
T Consensus 191 ~~~F~~~D~d~dG~Is~~El~~~l 214 (323)
T 1ij5_A 191 VADFRKIDTNSNGTLSRKEFREHF 214 (323)
T ss_dssp CCCHHHHCTTCCSEECHHHHHHHH
T ss_pred HHHHHHHCCCCCCcCcHHHHHHHH
Confidence 445788899999999999998876
No 469
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=41.98 E-value=25 Score=23.00 Aligned_cols=24 Identities=4% Similarity=0.144 Sum_probs=19.9
Q ss_pred hhHHhhccCCCCCC---cccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDH---LITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~---~is~~EW~~C~ 31 (160)
++.-|+..| ++|| .||..|+..-+
T Consensus 11 l~~~F~~~D-~~dG~~g~Is~~EL~~~l 37 (92)
T 3rm1_A 11 LIDVFHQYS-GREGDKHKLKKSELKELI 37 (92)
T ss_dssp HHHHHHHHH-TSSSSTTSBCHHHHHHHH
T ss_pred HHHHHHHHc-cCCCCcCeECHHHHHHHH
Confidence 355688899 8888 99999998875
No 470
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=41.63 E-value=31 Score=24.74 Aligned_cols=40 Identities=5% Similarity=-0.154 Sum_probs=31.1
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDIT 82 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~ 82 (160)
.+||-|+-.|-|.|..+=..|.+++++.+.- ..++.|+++
T Consensus 49 ~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 89 (183)
T 2obi_A 49 VCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCN 89 (183)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred EEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECC
Confidence 3588999999999998888888888887653 556666654
No 471
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=41.24 E-value=9.2 Score=30.96 Aligned_cols=23 Identities=26% Similarity=0.371 Sum_probs=12.5
Q ss_pred EEecCCCCCceeeeecCChhHHHHHHHH
Q psy4160 109 MIDLGTGNNNKINWALEDKQEMIDIVET 136 (160)
Q Consensus 109 ~vD~GTgnnnKin~~~~~kqe~iDiie~ 136 (160)
-+|+||||++ |.++++|++++..
T Consensus 10 ~~~~~~~~~~-----~~~~~~~~~~l~~ 32 (232)
T 3mjd_A 10 GVDLGTENLY-----FQSNAMFIEFALK 32 (232)
T ss_dssp -------CCS-----SCCCCCHHHHHHH
T ss_pred ccccCCCCCC-----CCcHHHHHHHHHH
Confidence 4899999975 7788999887754
No 472
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=41.08 E-value=12 Score=31.20 Aligned_cols=25 Identities=20% Similarity=0.206 Sum_probs=22.0
Q ss_pred hHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 8 APFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
+..|+..|.|+||.||..|+...++
T Consensus 421 ~~~F~~~D~d~dG~I~~~El~~~l~ 445 (484)
T 3nyv_A 421 ERAFRMFDSDNSGKISSTELATIFG 445 (484)
T ss_dssp HHHHHHHCTTCCSEEEHHHHHHHHH
T ss_pred HHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 4579999999999999999998764
No 473
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=40.80 E-value=17 Score=25.25 Aligned_cols=41 Identities=20% Similarity=0.220 Sum_probs=31.6
Q ss_pred hhhhhccCCCChh-hhhhHHHHHHHHHhhhc----ceEEEEEeCCc
Q psy4160 43 EDVIRFGHDWDPT-CMKMDEVLYSIAEKVKN----FAVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFGrd~dp~-Cm~mDevL~kia~kvkn----favIYlvDi~~ 83 (160)
.+||-|+-.|-|+ |..+-..|.+++++.+. -..++.|+++.
T Consensus 37 ~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~ 82 (172)
T 2k6v_A 37 VVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDP 82 (172)
T ss_dssp EEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCT
T ss_pred EEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECC
Confidence 3589999999997 99988889998887663 24566777653
No 474
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=39.04 E-value=14 Score=32.83 Aligned_cols=26 Identities=27% Similarity=0.305 Sum_probs=22.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
.+..|+..|+++||.||..|+...+.
T Consensus 314 l~~~F~~fD~D~dG~Is~~EL~~~L~ 339 (450)
T 3sg6_A 314 FKEAFSLFDKDGDGTITTKELGTVMR 339 (450)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 45779999999999999999998863
No 475
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=38.58 E-value=19 Score=23.03 Aligned_cols=55 Identities=20% Similarity=0.311 Sum_probs=33.8
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCcccc----cccccccc-ccceeeeeeeCcee
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPD----FNKMYELY-DPCTCMFFFRNKHI 108 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpd----fn~myeL~-dP~tvmFFfrnkHm 108 (160)
|+=|+.++-|.|.++-..|.+.. .....+|+++-|. +.+.+... -| ++ |.+++++
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~~------i~~~~~di~~~~~~~~~l~~~~~~~~vP-~l--~~~g~~i 67 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARKG------AEFNEIDASATPELRAEMQERSGRNTFP-QI--FIGSVHV 67 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT------CCCEEEESTTSHHHHHHHHHHHTSSCCC-EE--EETTEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcC------CCcEEEECCCCHHHHHHHHHHhCCCCcC-EE--EECCEEE
Confidence 45599999999999777776542 2235678876554 33344443 35 43 4566543
No 476
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=37.37 E-value=17 Score=27.20 Aligned_cols=24 Identities=8% Similarity=-0.061 Sum_probs=20.7
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
.+.-|+..| ++||.||..|-...|
T Consensus 53 l~~~F~~fD-d~dG~Is~~El~~~l 76 (139)
T 2jq6_A 53 YDEIFYTLS-PVNGKITGANAKKEM 76 (139)
T ss_dssp HHHHHHHSC-CSSSEEEHHHHHHHH
T ss_pred HHHHHHHhC-CCCCeECHHHHHHHH
Confidence 456799999 999999999998874
No 477
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=36.22 E-value=29 Score=21.31 Aligned_cols=56 Identities=18% Similarity=0.154 Sum_probs=33.4
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCcccc----ccccccccccceeeeeeeCcee
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPD----FNKMYELYDPCTCMFFFRNKHI 108 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpd----fn~myeL~dP~tvmFFfrnkHm 108 (160)
|+=|+.++-|.|.++-..|.... .....+|+++-|. +.+.+....-+++ |.+++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~------i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l--~~~g~~i 62 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSKG------VSFQELPIDGNAAKREEMIKRSGRTTVPQI--FIDAQHI 62 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHT------CCCEEEECTTCSHHHHHHHHHHSSCCSCEE--EETTEEE
T ss_pred EEEEECCCChhHHHHHHHHHHCC------CCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEEE
Confidence 34489999999999877776541 1234678776443 3444444444443 4455543
No 478
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=35.95 E-value=43 Score=23.72 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=21.5
Q ss_pred hhHHhhccC-CCCCC-cccHHHHHHhh
Q psy4160 7 IAPFLNKCD-ADDDH-LITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD-~~~D~-~is~~EW~~C~ 31 (160)
++.-|+..| .+.|| .||..|....+
T Consensus 24 l~~aF~~fD~~dgdGG~Is~~EL~~~l 50 (113)
T 2lnk_A 24 MVSTFHKYSGKEGDKFKLNKSELKELL 50 (113)
T ss_dssp HHHHHHHTTTTTSCTTCBCHHHHHHHH
T ss_pred HHHHHHHHcccCCCCCEECHHHHHHHH
Confidence 456789999 89997 99999999886
No 479
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=34.96 E-value=26 Score=25.02 Aligned_cols=25 Identities=16% Similarity=0.147 Sum_probs=21.7
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
++.-|+..|.+++|.||..|...-+
T Consensus 87 l~~aF~~fD~d~~G~I~~~el~~~l 111 (153)
T 3i5g_B 87 LRNAFSMFDEDGQGFIPEDYLKDLL 111 (153)
T ss_dssp HHHHHHTTCSSCSSCCCHHHHHHHH
T ss_pred HHHHHhccccCCCCeEeHHHHHHHH
Confidence 5667999999999999999987754
No 480
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=34.82 E-value=14 Score=27.21 Aligned_cols=18 Identities=6% Similarity=0.087 Sum_probs=9.2
Q ss_pred HHhhccCCCCCCcccHHH
Q psy4160 9 PFLNKCDADDDHLITLKE 26 (160)
Q Consensus 9 ~Ff~~CD~~~D~~is~~E 26 (160)
..|+..|+++||.|+..|
T Consensus 50 ~l~~~~D~d~~G~I~f~E 67 (174)
T 2i7a_A 50 SLVALMELKVNGRLDQEE 67 (174)
T ss_dssp HHHHHHCSSCSSEECHHH
T ss_pred HHHHHHCCCCCCcCCHHH
Confidence 344555555555555544
No 481
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=34.00 E-value=27 Score=23.93 Aligned_cols=58 Identities=21% Similarity=0.427 Sum_probs=34.7
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCcccccc---ccc-ccccccee-eeeeeCcee
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFN---KMY-ELYDPCTC-MFFFRNKHI 108 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn---~my-eL~dP~tv-mFFfrnkHm 108 (160)
|+=|++++-|.|.+.-++|.+.. + .| -.+|++..++-. +.. ++..-.|+ ..|.+++||
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~~--i-~~---~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi~g~~i 81 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSLG--V-EC---NVLELDQVDDGARVQEVLSEITNQKTVPNIFVNKVHV 81 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT--C-CC---EEEETTTSTTHHHHHHHHHHHHSCCSSCEEEETTEEE
T ss_pred EEEEEcCCCCcHHHHHHHHHHcC--C-Cc---EEEEecCCCChHHHHHHHHHHhCCCccCEEEECCEEE
Confidence 44499999999999888887652 1 22 467777655421 211 23221222 346688877
No 482
>2faf_A Phosphoenolpyruvate carboxykinase; pepck, phosphoryl transfer, lyase; HET: 20S EPE 1PE; 1.70A {Gallus gallus} PDB: 2fah_A* 2qzy_A*
Probab=33.89 E-value=20 Score=33.76 Aligned_cols=27 Identities=26% Similarity=0.370 Sum_probs=24.6
Q ss_pred ChhHHHHHHHHHhhccccCCeeEECCC
Q psy4160 126 DKQEMIDIVETVYRGARKGRGLVVSPK 152 (160)
Q Consensus 126 ~kqe~iDiie~iyrga~kGk~iv~sP~ 152 (160)
+.+|+...+...|+|.||||.+-|-|.
T Consensus 105 ~p~e~~~~l~~~f~G~M~GRTMYViPF 131 (608)
T 2faf_A 105 SPNAFQAAVQERFPGCMAGRPLYVIPF 131 (608)
T ss_dssp CHHHHHHHHHHHSTTTTTTSEEEEEEE
T ss_pred CHHHHHHHHHHhCCcccCCCEEEEEee
Confidence 678999999999999999999988775
No 483
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=33.89 E-value=38 Score=23.88 Aligned_cols=38 Identities=11% Similarity=-0.202 Sum_probs=28.9
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDI 81 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi 81 (160)
.+||-|+-.|-|.|. +=..|.+++++.++- ..|+.|++
T Consensus 34 ~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~ 72 (171)
T 3cmi_A 34 VVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPC 72 (171)
T ss_dssp EEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred EEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEEC
Confidence 358889999999999 666788998887653 55566654
No 484
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=33.57 E-value=33 Score=23.80 Aligned_cols=41 Identities=20% Similarity=0.039 Sum_probs=30.1
Q ss_pred hhhhhccC-CCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCCc
Q psy4160 43 EDVIRFGH-DWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITK 83 (160)
Q Consensus 43 ~~viRFGr-d~dp~Cm~mDevL~kia~kvknf-avIYlvDi~~ 83 (160)
..||-|+. .|-|.|...=..|.++.++.+.- ..+..|..+.
T Consensus 37 ~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~ 79 (163)
T 3gkn_A 37 WLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDS 79 (163)
T ss_dssp CEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46889998 89999999777777777765542 4556666663
No 485
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=33.35 E-value=49 Score=23.69 Aligned_cols=38 Identities=3% Similarity=-0.235 Sum_probs=29.6
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEe
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVD 80 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvD 80 (160)
.+||-|+-.|-|.|.++=..|.+++++.+.- ..|..|.
T Consensus 40 ~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is 78 (180)
T 3kij_A 40 VSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFP 78 (180)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEE
T ss_pred EEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 4589999999999999888899998886653 4445553
No 486
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=33.11 E-value=18 Score=24.39 Aligned_cols=78 Identities=15% Similarity=0.321 Sum_probs=43.9
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCcc----ccccc----cccccccceeeeeeeCceeEEecCCCC
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKV----PDFNK----MYELYDPCTCMFFFRNKHIMIDLGTGN 116 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~V----pdfn~----myeL~dP~tvmFFfrnkHm~vD~GTgn 116 (160)
|+=|+.+|-|.|.++=.+|.+... .| -.+|+++. |+..+ .+....-++ +|.+++||- +
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~~i---~~---~~~di~~~~~~~~~~~~~l~~~~g~~tvP~--ifi~g~~ig------G 86 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRLGV---QP---LVVELDQLGPQGPQLQKVLERLTGQHTVPN--VFVCGKHIG------G 86 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTC---CC---EEEEGGGSTTHHHHHHHHHHHHHSCCSSCE--EEETTEEEE------S
T ss_pred EEEEECCCChhHHHHHHHHHHcCC---CC---eEEEeecCCCChHHHHHHHHHHhCCCCcCE--EEECCEEEc------C
Confidence 566999999999998888776532 23 35677764 33222 222223344 367788772 2
Q ss_pred CceeeeecCChhHHHHHHHHH
Q psy4160 117 NNKINWALEDKQEMIDIVETV 137 (160)
Q Consensus 117 nnKin~~~~~kqe~iDiie~i 137 (160)
...+ -.+..+.+|.++++.+
T Consensus 87 ~~~~-~~~~~~g~L~~~l~~~ 106 (113)
T 3rhb_A 87 CTDT-VKLNRKGDLELMLAEA 106 (113)
T ss_dssp HHHH-HHHHHHTHHHHHHTC-
T ss_pred cHHH-HHHHHcCCHHHHHHHH
Confidence 1222 2244445666666543
No 487
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=32.28 E-value=53 Score=23.67 Aligned_cols=40 Identities=5% Similarity=-0.127 Sum_probs=30.3
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDIT 82 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~ 82 (160)
.+||-|+-.|-|.|..+=..|.+++++.+.- ..+..|.++
T Consensus 51 ~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 51 VCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred EEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 3588999999999988777888888876643 555666554
No 488
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=31.53 E-value=23 Score=26.56 Aligned_cols=25 Identities=4% Similarity=0.117 Sum_probs=21.4
Q ss_pred hHHhhccCCCCCCc-ccHHHHHHhhc
Q psy4160 8 APFLNKCDADDDHL-ITLKEWARCLE 32 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~-is~~EW~~C~~ 32 (160)
...|+..|.++||. ||..||...+.
T Consensus 94 ~~lf~~~D~d~dG~~I~f~EF~~~~~ 119 (214)
T 2l4h_A 94 ERICRVFSTSPAKDSLSFEDFLDLLS 119 (214)
T ss_dssp HHHHHHHCCSSSCCSEEHHHHHHHHH
T ss_pred HHHHHHhCcCCCCCEecHHHHHHHHH
Confidence 45788899999999 99999988753
No 489
>3u5i_q A0, L10E, 60S acidic ribosomal protein P0; translation, ribosome, ribosomal R ribosomal protein, STM1; 3.00A {Saccharomyces cerevisiae} PDB: 4b6a_q 3izc_s 3izs_s 3j16_G* 3o5h_M 3jyw_8
Probab=31.09 E-value=31 Score=29.24 Aligned_cols=74 Identities=14% Similarity=0.239 Sum_probs=53.0
Q ss_pred HHHHHHHHhhhcceEEEEEeCCccccccccccc----cccceeeeeeeCceeEEecCCC---------------CCceee
Q psy4160 61 EVLYSIAEKVKNFAVIYLVDITKVPDFNKMYEL----YDPCTCMFFFRNKHIMIDLGTG---------------NNNKIN 121 (160)
Q Consensus 61 evL~kia~kvknfavIYlvDi~~Vpdfn~myeL----~dP~tvmFFfrnkHm~vD~GTg---------------nnnKin 121 (160)
++..++.+.++++-.+|++|.+-++ =++|=+| ..- .++++.+|+-|+.=++.- .|+-+-
T Consensus 10 ~~v~el~e~l~~~~~v~vv~~~gl~-v~ql~~LR~~lR~~-~~~~V~KNTL~r~Al~~~~~~~~~le~L~~~L~G~~gl~ 87 (312)
T 3u5i_q 10 EYFAKLREYLEEYKSLFVVGVDNVS-SQQMHEVRKELRGR-AVVLMGKNTMVRRAIRGFLSDLPDFEKLLPFVKGNVGFV 87 (312)
T ss_dssp HHHHHHHHHHHHCSEEEEEECSSCC-HHHHHHHHHHHSSS-CEEEECCHHHHHHHHHTTSSSSCGGGGTGGGCCSSEEEE
T ss_pred HHHHHHHHHHHhCCEEEEEecCCCC-HHHHHHHHHHHhcC-ceEEEeehHHHHHHHhhCcccccChHHHHHhccCCEEEE
Confidence 5778889999999999999998876 3555566 333 578899999999887661 124455
Q ss_pred eecCChhHHHHHHHH
Q psy4160 122 WALEDKQEMIDIVET 136 (160)
Q Consensus 122 ~~~~~kqe~iDiie~ 136 (160)
|.-+|..+..++++.
T Consensus 88 Ft~~dp~~v~k~l~~ 102 (312)
T 3u5i_q 88 FTNEPLTEIKNVIVS 102 (312)
T ss_dssp EESSCHHHHHHHHHT
T ss_pred EECCCHHHHHHHHHh
Confidence 555666666666654
No 490
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=30.98 E-value=33 Score=23.79 Aligned_cols=39 Identities=15% Similarity=0.113 Sum_probs=30.4
Q ss_pred hhhhccCCCCh-hhhhhHHHHHHHHHhhhcc---eEEEEEeCC
Q psy4160 44 DVIRFGHDWDP-TCMKMDEVLYSIAEKVKNF---AVIYLVDIT 82 (160)
Q Consensus 44 ~viRFGrd~dp-~Cm~mDevL~kia~kvknf---avIYlvDi~ 82 (160)
+||-|+-.|-| .|...=..|.+++++.+.. ..+..|.++
T Consensus 36 vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d 78 (174)
T 1xzo_A 36 WLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVD 78 (174)
T ss_dssp EEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred EEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeC
Confidence 58899999999 9988778888888876653 556666665
No 491
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=30.60 E-value=24 Score=25.62 Aligned_cols=28 Identities=18% Similarity=0.280 Sum_probs=22.2
Q ss_pred cccc---hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 3 LEHC---IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 3 ~E~C---~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+|.+ +..-|+..|.+ ||.||..|....+
T Consensus 10 lE~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l 40 (121)
T 4drw_A 10 MEHAMETMMFTFHKFAGD-KGYLTKEDLRVLM 40 (121)
T ss_dssp HHHHHHHHHHTTGGGSCT-TCSCCHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCC-CCEEcHHHHHHHH
Confidence 4554 44568899988 8999999999875
No 492
>3moe_A Phosphoenolpyruvate carboxykinase, cytosolic [GTP; gluconeogenesis, lyase; HET: GTP SPV 1PE; 1.25A {Rattus norvegicus} PDB: 3mof_A* 3moh_A* 3dtb_A* 2qey_A* 2qf1_A* 2qew_A* 2rk7_A 2rk8_A 2rka_A* 2rkd_A 2rke_A 2qf2_A* 3dt2_A* 3dt7_A* 3dt4_A* 1khb_A* 1khe_A* 1khf_A* 1khg_A 1m51_A* ...
Probab=28.57 E-value=18 Score=34.15 Aligned_cols=27 Identities=22% Similarity=0.432 Sum_probs=24.3
Q ss_pred ChhHHHHHHHHHhhccccCCeeEECCC
Q psy4160 126 DKQEMIDIVETVYRGARKGRGLVVSPK 152 (160)
Q Consensus 126 ~kqe~iDiie~iyrga~kGk~iv~sP~ 152 (160)
+.+|+...+...|+|.||||.+-|-|.
T Consensus 120 ~p~e~~~~l~~~f~G~M~GRTMYViPF 146 (624)
T 3moe_A 120 SEEDFEKAFNARFPGCMKGRTMYVIPF 146 (624)
T ss_dssp CHHHHHHHHHTTSTTTTTTSEEEEEEE
T ss_pred CHHHHHHHHHhhCcccccCCeEEEEee
Confidence 568999999999999999999998775
No 493
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=28.28 E-value=20 Score=29.75 Aligned_cols=27 Identities=19% Similarity=0.284 Sum_probs=22.6
Q ss_pred chhHHhhccCCCCCCcccHHHHHHhhc
Q psy4160 6 CIAPFLNKCDADDDHLITLKEWARCLE 32 (160)
Q Consensus 6 C~~~Ff~~CD~~~D~~is~~EW~~C~~ 32 (160)
+..-+|+..|+++||.|+..|.-..|.
T Consensus 133 ~a~~lf~~FD~~~~G~I~f~ef~~aLs 159 (261)
T 1eg3_A 133 CLNWLLNVYDTGRTGRIRVLSFKTGII 159 (261)
T ss_dssp HHHHHHHHHCTTCCSEEEHHHHHHHHH
T ss_pred HHHHHHHHccCCCCceEeHHHHHHHHH
Confidence 455589999999999999999977654
No 494
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=27.75 E-value=19 Score=32.82 Aligned_cols=25 Identities=12% Similarity=0.308 Sum_probs=21.9
Q ss_pred hhHHhhccCCCCCCcccHHHHHHhh
Q psy4160 7 IAPFLNKCDADDDHLITLKEWARCL 31 (160)
Q Consensus 7 ~~~Ff~~CD~~~D~~is~~EW~~C~ 31 (160)
+..+|..+|.|+||.||..||..++
T Consensus 763 ~~~~~~~~D~d~dG~I~~~EF~~~~ 787 (863)
T 1sjj_A 763 FARIMSIVDPNRMGVVTFQAFIDFM 787 (863)
T ss_dssp HHHHHHHHCTTSCSEEETTHHHHTH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 5678899999999999999999875
No 495
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=27.43 E-value=41 Score=22.73 Aligned_cols=56 Identities=14% Similarity=0.124 Sum_probs=35.5
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCccccccccc-ccc----ccceeeeeeeCcee
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKVPDFNKMY-ELY----DPCTCMFFFRNKHI 108 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~Vpdfn~my-eL~----dP~tvmFFfrnkHm 108 (160)
|+=|+.++=|.|.++-.+|.+..- . .-.+||++-|+..+.+ ++. .-++ +|.++++|
T Consensus 18 v~vy~~~~Cp~C~~ak~~L~~~~i---~---y~~idI~~~~~~~~~l~~~~~g~~~vP~--ifi~g~~i 78 (99)
T 3qmx_A 18 IEIYTWSTCPFCMRALALLKRKGV---E---FQEYCIDGDNEAREAMAARANGKRSLPQ--IFIDDQHI 78 (99)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHTC---C---CEEEECTTCHHHHHHHHHHTTTCCCSCE--EEETTEEE
T ss_pred EEEEEcCCChhHHHHHHHHHHCCC---C---CEEEEcCCCHHHHHHHHHHhCCCCCCCE--EEECCEEE
Confidence 556999999999998888876531 2 2357888877654432 222 2234 35666655
No 496
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=26.17 E-value=71 Score=24.06 Aligned_cols=40 Identities=8% Similarity=-0.048 Sum_probs=30.6
Q ss_pred hhhhhccCCCChhhhhhHHHHHHHHHhhhcc-eEEEEEeCC
Q psy4160 43 EDVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDIT 82 (160)
Q Consensus 43 ~~viRFGrd~dp~Cm~mDevL~kia~kvknf-avIYlvDi~ 82 (160)
.+||-|+-.|-|+|.++=..|.+++++.+.- ..|..|.++
T Consensus 49 ~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 49 VLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred EEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 3589999999999999667788888876653 556666654
No 497
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=25.47 E-value=66 Score=23.26 Aligned_cols=39 Identities=21% Similarity=0.274 Sum_probs=30.1
Q ss_pred hhhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCC
Q psy4160 44 DVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT 82 (160)
Q Consensus 44 ~viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~ 82 (160)
.|+-|...+-|.|.++...|.+++++...-..+..+++.
T Consensus 28 ~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 28 EVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred EEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 477899999999999999999998876543445555554
No 498
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=25.22 E-value=36 Score=24.41 Aligned_cols=23 Identities=17% Similarity=0.198 Sum_probs=19.7
Q ss_pred hHHhhccCCCCCCcccHHHHHHh
Q psy4160 8 APFLNKCDADDDHLITLKEWARC 30 (160)
Q Consensus 8 ~~Ff~~CD~~~D~~is~~EW~~C 30 (160)
+.-|+..|.+++|.||..|.-.-
T Consensus 88 ~~aF~~fD~d~~G~I~~~el~~~ 110 (159)
T 3i5g_C 88 MEAFKTFDREGQGLISSAEIRNV 110 (159)
T ss_dssp HHHHHHHCTTSSSEECHHHHHHH
T ss_pred HHHHHHHhcCCCCcCcHHHHHHH
Confidence 44589999999999999998765
No 499
>1gxg_A Colicin E8 immunity protein; inhibitor, inhibitor protein of DNAse colicin E8, bacteriocin immunity, plasmid,; NMR {Escherichia coli} SCOP: a.28.2.1 PDB: 1gxh_A
Probab=25.06 E-value=36 Score=24.08 Aligned_cols=17 Identities=18% Similarity=0.266 Sum_probs=14.8
Q ss_pred CChhHHHHHHHHHhhcc
Q psy4160 125 EDKQEMIDIVETVYRGA 141 (160)
Q Consensus 125 ~~kqe~iDiie~iyrga 141 (160)
-+.+|||++|+.|+.+.
T Consensus 10 yTe~Efi~lv~~I~~~~ 26 (85)
T 1gxg_A 10 YTETEFKKIIEDIINCE 26 (85)
T ss_dssp SCHHHHHHHHHHHHHTS
T ss_pred cCHHHHHHHHHHHHhCC
Confidence 36799999999999884
No 500
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=24.96 E-value=30 Score=21.52 Aligned_cols=73 Identities=14% Similarity=0.090 Sum_probs=40.6
Q ss_pred hhhccCCCChhhhhhHHHHHHHHHhhhcceEEEEEeCCcc----ccccccccc-----cccceeeeeeeCceeEEecCCC
Q psy4160 45 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITKV----PDFNKMYEL-----YDPCTCMFFFRNKHIMIDLGTG 115 (160)
Q Consensus 45 viRFGrd~dp~Cm~mDevL~kia~kvknfavIYlvDi~~V----pdfn~myeL-----~dP~tvmFFfrnkHm~vD~GTg 115 (160)
|+=|+.++-|.|.++-.+|.+.. -.|-. .-+|+.+- +++.+.+.. ..-++ .|.+++|+-
T Consensus 6 v~ly~~~~Cp~C~~~~~~L~~~~---i~~~~-~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~--i~i~g~~i~------ 73 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWFEENN---IAFDE-TIIDDYAQRSKFYDEMNQSGKVIFPISTVPQ--IFIDDEHIG------ 73 (89)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT---CCCEE-EECCSHHHHHHHHHHHHTTTCCSSCCCSSCE--EEETTEEEE------
T ss_pred EEEEEcCCChhHHHHHHHHHHcC---CCceE-EEeecCCChhHHHHHHHHhCCCCCCCCccCE--EEECCEEEe------
Confidence 44589999999999777775542 23322 33454432 345544444 23334 245666551
Q ss_pred CCceeeeecCChhHHHHHHHHHhh
Q psy4160 116 NNNKINWALEDKQEMIDIVETVYR 139 (160)
Q Consensus 116 nnnKin~~~~~kqe~iDiie~iyr 139 (160)
.-+++..+++.+|.
T Consensus 74 ----------g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 74 ----------GFTELKANADKILN 87 (89)
T ss_dssp ----------SHHHHHHTHHHHTT
T ss_pred ----------ChHHHHHHHHHHhc
Confidence 23566666666553
Done!