BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4162
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9DAK8|LRC51_MOUSE Leucine-rich repeat-containing protein 51 OS=Mus musculus GN=Lrrc51
PE=2 SV=1
Length = 192
Score = 90.5 bits (223), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Query: 3 EYYKTSIDPEFKIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSH 62
+Y TS+ + PLD SF+ +Q + + ++ + + + S G+ T+SLWL++
Sbjct: 5 DYMNTSVQ---EPPLDYSFKSVQMVQDLVTEEPRTGLRPVRHSKS---GKSLTQSLWLNN 58
Query: 63 NKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEY 122
N ++ + + +V + + P+ + WIDLSFN++ +D + T F NL +LYLH N I
Sbjct: 59 NVLNDLKDFNQVVSQLLQHPENLAWIDLSFNDLTTIDP-VLTTFFNLSVLYLHGNGIHRL 117
Query: 123 LSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 165
V L + LR+L+L+GNPIE+ + YR V +P++ T D
Sbjct: 118 GEVNKLAVLPRLRSLTLHGNPIEEEKGYRQYVLCNLPRITTFD 160
>sp|B6CZ61|LRC51_RAT Leucine-rich repeat-containing protein 51 OS=Rattus norvegicus
GN=Lrrc51 PE=2 SV=1
Length = 192
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 91/165 (55%), Gaps = 11/165 (6%)
Query: 3 EYYKTSIDPEFKIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLV--GRYDTRSLWL 60
+Y TS+ + PLD SF+ +Q +Q L R G P G+ T+SLWL
Sbjct: 5 DYMNTSVQ---EPPLDYSFKSVQ-----MIQDLISEEPRTGLRPVKYSKSGKSLTQSLWL 56
Query: 61 SHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIE 120
++N ++ + + +V + + P+ + WIDLSFN++ +D + T F NL +LYLH N I
Sbjct: 57 NNNVLNDLKDFNQVVSQLLQHPENLAWIDLSFNDLTTIDP-VLTTFFNLSVLYLHGNSIH 115
Query: 121 EYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 165
V L + LR+L+L+GNPIE+ + YR V +P++ T D
Sbjct: 116 RLGEVNKLAVLPRLRSLTLHGNPIEEEKGYRQYVLCNLPRITTFD 160
>sp|Q5EAD8|LRC51_BOVIN Leucine-rich repeat-containing protein 51 OS=Bos taurus GN=LRRC51
PE=2 SV=1
Length = 192
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 4 YYKTSIDPEFKIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLV--GRYDTRSLWLS 61
Y TS+ + PLD SF+ I Q L R G P G+ T+SLWL+
Sbjct: 6 YMNTSVQ---EPPLDYSFRSIH-----VTQDLLSEEPRTGLRPVRHAKSGKSMTQSLWLN 57
Query: 62 HNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEE 121
+N ++ + + V + + P+ + WIDLSFN++ ++D + T F NL +LYLH N I+
Sbjct: 58 NNVLTDLRDFNHAVSQLLEHPENLAWIDLSFNDLTSIDP-VLTTFFNLSVLYLHGNSIQR 116
Query: 122 YLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 165
V L + LR+L+L+GNPIE+ + YR V +P + T D
Sbjct: 117 LGEVNKLAALPRLRSLTLHGNPIEEEKGYRQYVLCTLPHITTFD 160
>sp|B6CZ54|LRC51_PROCO Leucine-rich repeat-containing protein 51 OS=Propithecus coquereli
GN=LRTOMT PE=2 SV=1
Length = 192
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 3 EYYKTSIDPEFKIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSH 62
+Y TS+ + PLD SF+ I + + ++ + + L S G+ T+SLWL++
Sbjct: 5 DYMNTSVQ---EPPLDYSFRSIHVIQDLVNEEPRTGLRPLKRSKS---GKSLTQSLWLNN 58
Query: 63 NKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEY 122
N ++ + + + + + P+ + WIDLSFN++ ++D + T F NL +LYLH N I+
Sbjct: 59 NVLNDLRDFNQVASQLLEHPENLAWIDLSFNDLTSIDP-VLTTFFNLSVLYLHGNSIQHL 117
Query: 123 LSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 165
V L + LR+L+L+GNP+E+ + YR V +P + T D
Sbjct: 118 GEVNKLAVLPRLRSLTLHGNPMEEEKGYRQYVLCTLPHITTFD 160
>sp|B6CZ45|LRC51_MACMU Leucine-rich repeat-containing protein 51 OS=Macaca mulatta
GN=LRTOMT PE=2 SV=1
Length = 192
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 3 EYYKTSIDPEFKIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSH 62
+Y TS+ + PLD SF+ I + + ++ + + L S G+ T+SLWL++
Sbjct: 5 DYMNTSVQ---EPPLDYSFRSIHVIQDLVNEEPRTGLRPLKRSKS---GKSLTQSLWLNN 58
Query: 63 NKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEY 122
N ++ + + + + + P+ + WIDLSFN++ ++D + T F NL +LYLH N I+
Sbjct: 59 NVLNDLRDFNQVASQLLEHPENLAWIDLSFNDLTSIDP-VLTTFFNLSVLYLHGNSIQHL 117
Query: 123 LSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 165
V L + LR+L+L+GNP+E+ + YR V +P + T D
Sbjct: 118 GEVNKLAVLPRLRSLTLHGNPMEEEKGYRQYVLCTLPHITTFD 160
>sp|B6CZ40|LRC51_PANTR Leucine-rich repeat-containing protein 51 OS=Pan troglodytes
GN=LRTOMT PE=2 SV=1
Length = 192
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
Query: 3 EYYKTSIDPEFKIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSH 62
+Y TS+ + PLD SF+ I + + ++ + + L S G+ T+SLWL++
Sbjct: 5 DYMNTSVQ---EPPLDYSFRSIHVIQDLVNEEPRTGLRPLKRSKS---GKSLTQSLWLNN 58
Query: 63 NKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEY 122
N ++ + + + + + P+ + WIDLSFN++ ++D + T F NL +LYLH N I+
Sbjct: 59 NVLNDLRDFNQVASQLLEHPENLAWIDLSFNDLTSIDP-VLTTFFNLSVLYLHGNSIQRL 117
Query: 123 LSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEK 174
V L + LR+L+L+GNP+E+ + YR V + ++ T D + +++
Sbjct: 118 GEVNKLAVLPRLRSLTLHGNPMEEEKGYRQYVLCTLSRITTFDFAGVTKADR 169
>sp|Q96E66|LRC51_HUMAN Leucine-rich repeat-containing protein 51 OS=Homo sapiens GN=LRTOMT
PE=2 SV=1
Length = 192
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 3 EYYKTSIDPEFKIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSH 62
+Y TS+ + PLD SF+ I + + ++ + + L S G+ T+SLWL++
Sbjct: 5 DYMNTSVQ---EPPLDYSFRSIHVIQDLVNEEPRTGLRPLKRSKS---GKSLTQSLWLNN 58
Query: 63 NKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEY 122
N ++ + + + + + P+ + WIDLSFN++ ++D + T F NL +LYLH N I+
Sbjct: 59 NVLNDLRDFNQVASQLLEHPENLAWIDLSFNDLTSIDP-VLTTFFNLSVLYLHGNSIQRL 117
Query: 123 LSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 165
V L + LR+L+L+GNP+E+ + YR V + ++ T D
Sbjct: 118 GEVNKLAVLPRLRSLTLHGNPMEEEKGYRQYVLCTLSRITTFD 160
>sp|Q4R6X9|LRC48_MACFA Leucine-rich repeat-containing protein 48 OS=Macaca fascicularis
GN=LRRC48 PE=2 SV=1
Length = 523
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 28/130 (21%)
Query: 56 RSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNV----------DKNMFTN 105
R L L +N I + GL++L H + W+DLSFNNI+ + D ++F N
Sbjct: 68 RKLQLDNNIIEKIGGLENLTH--------LVWLDLSFNNIETIEGLDTLVNLEDLSLFNN 119
Query: 106 ----------FPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVS 155
L++L L NQI+ +++ LRR LRTLSL GNPI + +Y+ +
Sbjct: 120 RISKIDSLDALVKLQVLSLGNNQIDNMMNIVYLRRFQCLRTLSLSGNPISEAEDYKMFIC 179
Query: 156 TMIPQLVTLD 165
+P LV LD
Sbjct: 180 AYLPDLVYLD 189
>sp|Q9H069|LRC48_HUMAN Leucine-rich repeat-containing protein 48 OS=Homo sapiens GN=LRRC48
PE=2 SV=2
Length = 523
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 28/130 (21%)
Query: 56 RSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNV----------DKNMFTN 105
R L L +N I + GL++L H + W+DLSFNNI+ + D ++F N
Sbjct: 68 RKLQLDNNIIEKIEGLENLAH--------LVWLDLSFNNIETIEGLDTLVNLEDLSLFNN 119
Query: 106 ----------FPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVS 155
L++L L N+I+ +++ LRR LRTLSL NPI + +Y+ +
Sbjct: 120 RISKIDSLDALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRTLSLSRNPISEAEDYKMFIC 179
Query: 156 TMIPQLVTLD 165
+P L+ LD
Sbjct: 180 AYLPDLMYLD 189
>sp|Q9D5E4|LRC48_MOUSE Leucine-rich repeat-containing protein 48 OS=Mus musculus GN=Lrrc48
PE=2 SV=1
Length = 523
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 28/130 (21%)
Query: 56 RSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDK-NMFTNFPNL----- 109
+ L L++N I + GL +L+H + W+DLSFNNI+ ++ + N +L
Sbjct: 68 KKLQLNNNIIERIEGLTNLIH--------LVWLDLSFNNIEAIEGLDTLVNLEDLSLSNN 119
Query: 110 --------------KILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVS 155
++L L NQI +++ LRR LRTLSL GNP+ + EY+ +
Sbjct: 120 RISKVDSLDALVKLQVLSLGNNQISNMMNIIYLRRFPCLRTLSLAGNPVSEAEEYKMFIY 179
Query: 156 TMIPQLVTLD 165
+ LV LD
Sbjct: 180 AYLSDLVYLD 189
>sp|Q5XI54|LRC48_RAT Leucine-rich repeat-containing protein 48 OS=Rattus norvegicus
GN=Lrrc48 PE=2 SV=1
Length = 523
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 32/132 (24%)
Query: 56 RSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLH 115
R L L++N I + GL++L H + W+DLSFNNI+ ++ NL+ L L
Sbjct: 68 RKLQLNNNIIERIEGLENLTH--------LVWLDLSFNNIEAIEG--LDTLVNLEDLSLS 117
Query: 116 KNQIEEYLSV----------------------FVLRRVNSLRTLSLYGNPIEKIREYRAV 153
N+I + S+ LRR LRTLSL GNP+ + EY+
Sbjct: 118 HNRISKIDSLDPLVNLQVLSLGNNQINNMMNIIYLRRFPCLRTLSLSGNPVSEAEEYKVF 177
Query: 154 VSTMIPQLVTLD 165
+ +P LV LD
Sbjct: 178 IYAYLPDLVYLD 189
>sp|Q32PL1|PP1R7_DANRE Protein phosphatase 1 regulatory subunit 7 OS=Danio rerio GN=ppp1r7
PE=2 SV=1
Length = 345
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 56 RSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLH 115
R L+LSHN I ++ GL+ + + +D++ N IK ++ ++ +LK +++
Sbjct: 240 RELYLSHNGIEVMEGLE--------NNKKLSTLDIAANRIKKIEN--ISHLTDLKEFWMN 289
Query: 116 KNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFI 169
NQIE + + L+ L T+ L NP++K +YR + +P + +D+ FI
Sbjct: 290 DNQIENWADLDELKNAKGLETVYLERNPLQKDPQYRRKIMLALPSVRQIDATFI 343
>sp|Q8CIV8|TBCE_MOUSE Tubulin-specific chaperone E OS=Mus musculus GN=Tbce PE=1 SV=1
Length = 524
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 60 LSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQI 119
+ +++SL+ L L H + D IG + F + + K FP LK L ++ NQI
Sbjct: 266 IDESQLSLIADLPRLEHLVLSD---IGLSSIHFPDAEIGCKTSM--FPALKYLIVNDNQI 320
Query: 120 EEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQ 175
E+ + L ++ SL+ LS NP+ K + ++ I QL TL+ ILP E++
Sbjct: 321 SEWSFINELDKLQSLQALSCTRNPLSKADKAEEIIIAKIAQLRTLNRCQILPEERR 376
>sp|Q5HZV9|PP1R7_RAT Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus
GN=Ppp1r7 PE=1 SV=1
Length = 360
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 56 RSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLH 115
R L+LSHN I ++ GL++ T+LD ++ N IK ++ ++ L+ +++
Sbjct: 255 RELYLSHNGIEVIEGLENNNKLTMLD--------IASNRIKKIEN--ISHLTELQEFWMN 304
Query: 116 KNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFI 169
N +E + + L+ SL T+ L NP++K +YR V +P + +D+ F+
Sbjct: 305 DNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFV 358
>sp|Q14DL3|LRIQ3_MOUSE Leucine-rich repeat and IQ domain-containing protein 3 OS=Mus
musculus GN=Lrriq3 PE=2 SV=1
Length = 633
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 88 IDLSFNNIKNV-DKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEK 146
+DL N IK + DKN ++ NLK+LYLH N + ++ VL SL L+++ P+
Sbjct: 77 LDLHGNQIKTLPDKNFWSGLKNLKLLYLHDNGFSKLKNICVLSGCVSLIGLTMFDCPVSL 136
Query: 147 IREYRAVVSTMIPQLVTLDSVFILPSE 173
+ YR V+ I L LD I E
Sbjct: 137 KKGYRHVLVNSIWPLKALDHHVISDEE 163
>sp|Q15435|PP1R7_HUMAN Protein phosphatase 1 regulatory subunit 7 OS=Homo sapiens
GN=PPP1R7 PE=1 SV=1
Length = 360
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 56 RSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLH 115
R L+LSHN I ++ GL++ T+LD ++ N IK ++ ++ L+ +++
Sbjct: 255 RELYLSHNGIEVIEGLENNNKLTMLD--------IASNRIKKIEN--ISHLTELQEFWMN 304
Query: 116 KNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFI 169
N +E + + L+ SL T+ L NP++K +YR V +P + +D+ F+
Sbjct: 305 DNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFV 358
>sp|Q9NJE9|TILB_TRYBB Protein TILB homolog OS=Trypanosoma brucei brucei GN=lrrc6 PE=3
SV=1
Length = 383
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 58 LWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKN 117
L+L +N IS + GL L + + +++L+ NNI ++ L+ L L N
Sbjct: 49 LYLCNNYISRIEGLQHLKY--------LKYLNLAVNNITYIEG--LEGCEALERLDLTLN 98
Query: 118 QIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQET 177
+ + V LR L L L GNP K+ YRA V +PQL LD ++ +E+ E
Sbjct: 99 FVADVTCVERLRANAFLDQLHLTGNPCTKVAGYRAYVVHALPQLRELDGEEVIKTERLEA 158
>sp|Q3T0W4|PP1R7_BOVIN Protein phosphatase 1 regulatory subunit 7 OS=Bos taurus GN=PPP1R7
PE=1 SV=1
Length = 360
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 56 RSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLH 115
R L+LSHN I ++ GLD+ T+LD ++ N IK ++ ++ L+ +++
Sbjct: 255 RELYLSHNGIEVIEGLDNNNKLTMLD--------IASNRIKKIEN--VSHLTELQEFWMN 304
Query: 116 KNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFI 169
N ++ + + L+ SL T+ L NP+++ +YR + +P + +D+ F+
Sbjct: 305 DNLLDCWSDLDELKGARSLETVYLERNPLQRDPQYRRKIMLALPSVRQIDATFV 358
Score = 31.6 bits (70), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 30/146 (20%)
Query: 27 LDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIG 86
L KV L+ N+ + E+ L G R L L N+I + LD+L +L
Sbjct: 97 LKKVKTLCLRQNLIKCIEN---LEGLQSLRELDLYDNQIRRIENLDALTELEVL------ 147
Query: 87 WIDLSFN---NIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNP 143
D+SFN NI+ +DK LK L+L N+I + ++ L + L+ L L N
Sbjct: 148 --DISFNLLRNIEGIDK-----LTRLKKLFLVNNKINKIENISSLHQ---LQMLELGSNR 197
Query: 144 IEKIREYRAVVSTMIPQLVTLDSVFI 169
I RA+ + I L L+S+F+
Sbjct: 198 I------RAIEN--IDTLTNLESLFL 215
>sp|Q7S9P4|RU2A_NEUCR U2 small nuclear ribonucleoprotein A' OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=lea-1 PE=3 SV=1
Length = 252
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 90 LSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIRE 149
L+ N I + + PNLK L L N I E + VL R L L L NP+ K
Sbjct: 69 LARNRIAQIQSTLPNATPNLKNLVLASNNIGELADLEVLGRFPRLTHLVLTDNPVTKKEN 128
Query: 150 YRAVVSTMIPQLVTLDSVFILPSEKQETNAL--NAEIRSYLLPKYEKLEAATFKRTAVSV 207
YR V + PQ+ LD V + +E+Q+ L A+ + L + +++ TF A S
Sbjct: 129 YRYWVLWLCPQVRFLDYVKVKDAERQKAKELFGTADEPTELAKTIKGIKSKTFDVGASSA 188
Query: 208 ES 209
Sbjct: 189 NG 190
>sp|Q99257|MEX67_YEAST mRNA export factor MEX67 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MEX67 PE=1 SV=1
Length = 599
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 88 IDLSFNNIKNVD--KNMFTNFPNLKILYLHKNQIEEYLSVFVLR-RVNSLRTLSLYGNPI 144
++L+ N +K++ + FPNLK L L NQI + S+ V + + LR L + NPI
Sbjct: 167 VNLADNQLKDISAISTLAQTFPNLKNLCLANNQIFRFRSLEVWKNKFKDLRELLMTNNPI 226
Query: 145 EKIREYRAVVSTMIPQLVTLDSVFILPSEKQET 177
+ YR + + P+LV LD+V + +K +T
Sbjct: 227 TTDKLYRTEMLRLFPKLVVLDNVIVRDEQKLQT 259
>sp|Q9VR52|TILB_DROME Protein TILB OS=Drosophila melanogaster GN=tilB PE=1 SV=1
Length = 395
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 87 WIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEK 146
+++++ NNI+ V+ +L L L N I E SV L +LR L L GNP
Sbjct: 70 YLNVAINNIERVEN--LEGCESLSKLDLTLNFIRELTSVESLCGNYNLRELVLIGNPCVD 127
Query: 147 IREYRAVVSTMIPQLVTLDSVFILPSEK 174
YR V +PQL +LD V I PSE+
Sbjct: 128 YPHYRDYVVATLPQLNSLDCVEITPSER 155
>sp|Q7ZV84|DAAF1_DANRE Dynein assembly factor 1, axonemal OS=Danio rerio GN=dnaaf1 PE=2
SV=2
Length = 555
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Query: 57 SLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNV-DKNMFTNFPNLKILYLH 115
+L +S+N I ++ + SL + L +S N + NV D ++ P++ +L L
Sbjct: 144 TLNVSNNYIKVIENISSLSDLSTLQ--------ISHNTLGNVCDMEELSHCPSISVLDLS 195
Query: 116 KNQIEEYLSVFVLRRVNSLRTLSLYGNP-IEKIREYRAVVSTMIPQLVTLDSVFILPSEK 174
N+I + V +L ++ LR L+L GN I+KI YR + + QL LD + P ++
Sbjct: 196 HNRISDPALVNILEKMPDLRVLNLMGNEVIKKIPNYRKTLIVRLKQLTYLDDRPVFPKDR 255
Query: 175 QETNALNA 182
A A
Sbjct: 256 ACAEAWAA 263
>sp|Q5FVQ9|TBCE_RAT Tubulin-specific chaperone E OS=Rattus norvegicus GN=Tbce PE=2 SV=1
Length = 524
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 106 FPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 165
FP L L ++ NQI E+ + L ++ SL+ LS NP+ K + ++ I QL TL+
Sbjct: 307 FPALTYLIVNDNQISEWSFINELDKLQSLQALSCARNPLTKGDKAEEIIIAKIGQLKTLN 366
Query: 166 SVFILPSEKQ 175
ILP E++
Sbjct: 367 RCQILPEERR 376
>sp|Q9MYW3|TLR4_HORSE Toll-like receptor 4 OS=Equus caballus GN=TLR4 PE=2 SV=1
Length = 843
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 88 IDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKI 147
+DLSFN +K + + F+NFP L++L L + +I E + + +N L TL L GNPI +
Sbjct: 59 LDLSFNPLKELGSHSFSNFPELQVLDLSRCEI-EMIEDDAYQGLNHLSTLILTGNPIRSL 117
Query: 148 R--EYRAVVS--TMIPQLVTLDSVFILP----SEKQETNALNAEIRSYLLPKY 192
+ + S T++ L S+ P +E N + I S+ LP+Y
Sbjct: 118 ALGAFSGLSSLQTLVAVETKLSSLEKFPIGHLKTLKELNVAHNLIHSFKLPEY 170
>sp|Q09JZ4|DAAF1_CHLRE Leucine-rich repeat-containing protein ODA7 OS=Chlamydomonas
reinhardtii GN=ODA7 PE=1 SV=1
Length = 432
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 109 LKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPI-EKIREYRAVVSTMIPQLVTLDSV 167
L+ L L N++E+ V +L+++ LR L L GNP+ I+ YR V+ T IP L LD
Sbjct: 139 LQTLDLQNNELEDPGIVDILKQIPDLRCLYLKGNPVVSNIKNYRKVLVTSIPSLTYLDDR 198
Query: 168 FILPSEKQETNA 179
+ +E++ A
Sbjct: 199 PVFDNERKIAQA 210
>sp|Q3UM45|PP1R7_MOUSE Protein phosphatase 1 regulatory subunit 7 OS=Mus musculus
GN=Ppp1r7 PE=1 SV=2
Length = 361
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 56 RSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLH 115
R L+LS+N I ++ GL++ T+LD ++ N IK ++ ++ L+ +++
Sbjct: 256 RELYLSNNGIEVIEGLENNNKLTMLD--------IASNRIKKIEN--ISHLTELQEFWMN 305
Query: 116 KNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFI 169
N +E + + L+ SL T+ L NP++K +YR V +P + +D+ ++
Sbjct: 306 DNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATYV 359
>sp|Q68Y56|TLR4_PIG Toll-like receptor 4 OS=Sus scrofa GN=TLR4 PE=2 SV=1
Length = 841
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 82 PDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYG 141
P + +DLSFN + ++D N F++FP L++L L + +I+ + + +N L TL L G
Sbjct: 53 PTSVKILDLSFNYLSHLDSNSFSSFPELQVLDLSRCEIQT-IDDDAYQGLNYLSTLILTG 111
Query: 142 NPIEKI 147
NPI+ +
Sbjct: 112 NPIQSL 117
>sp|Q9WV82|TLR4_CRIGR Toll-like receptor 4 OS=Cricetulus griseus GN=TLR4 PE=2 SV=1
Length = 838
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 82 PDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYG 141
P + +DLSFN +K + + F NFP LK+L L + +IE + + ++ L TL L G
Sbjct: 52 PSSVKHLDLSFNPLKTLGSHSFFNFPELKLLDLSRCEIET-IEDKAYQGLHQLTTLILTG 110
Query: 142 NPIEKIREYR----AVVSTMIPQLVTLDSVFILPSEK----QETNALNAEIRSYLLPKY 192
NPI+ + + A + ++ + L S+ LP ++ N + I S+ LP+Y
Sbjct: 111 NPIQNLSKGTFSGLANLQNLVAVEIKLASLDSLPIGHLVTLKKLNVAHNLIHSFKLPEY 169
>sp|Q5RFS7|PP1R7_PONAB Protein phosphatase 1 regulatory subunit 7 OS=Pongo abelii
GN=PPP1R7 PE=2 SV=1
Length = 360
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 56 RSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLH 115
+ L+LSHN I ++ GL++ T+LD ++ N IK ++ ++ + +++
Sbjct: 255 QELYLSHNGIEVIEGLENNNKLTMLD--------IASNRIKKIEN--ISHLTEPQEFWMN 304
Query: 116 KNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFI 169
N +E + + L+ SL T+ L NP++K +YR V +P + +D+ F+
Sbjct: 305 DNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFV 358
>sp|Q4R3F0|TILB_MACFA Protein TILB homolog OS=Macaca fascicularis GN=LRCC6 PE=2 SV=1
Length = 466
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 54 DTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILY 113
D + L+L +N I + + L + +++L+ NNI+ ++ L L
Sbjct: 45 DLKILYLQNNLIGKIENVSKLKK--------LEYLNLALNNIEKIEN--LEGCEELAKLD 94
Query: 114 LHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSE 173
L N I E S+ L+ L+ L L GNP YR V +PQL LD I PSE
Sbjct: 95 LTVNFIGELSSIKTLKHNIHLKELFLMGNPCAFFDHYREFVVATLPQLKWLDGKGIEPSE 154
Query: 174 K----QETNALNAEIR 185
+ QE + + +IR
Sbjct: 155 RIKALQEYSIIEPQIR 170
>sp|Q6FV04|RU2A_CANGA U2 small nuclear ribonucleoprotein A' OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=LEA1 PE=3 SV=1
Length = 266
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 26/180 (14%)
Query: 51 GRYDT------RSLWLSHNKISLVYGLDSLVHRT-ILD---------PDL-----IGWID 89
G+Y+T R+L L + I++ L+ L T ILD PDL I +
Sbjct: 21 GKYNTQKCVILRNLGLEGDDIAMPASLNHLAKPTHILDLTNNDLVFFPDLHHRDDIETLL 80
Query: 90 LSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRV-NSLRTLSLYGNPIEKIR 148
LS N + +D + + LK L L N IE + ++ L +++R L L GNPI +
Sbjct: 81 LSKNRLMVLDAALLPS--KLKSLSLAFNGIENFETLIPLSHCPSTVRDLVLIGNPICHLS 138
Query: 149 EYRAVVSTMIPQLVTLDSVFILPSEKQETNALNAEIRSYLLPKYEKLEAATFKRTAVSVE 208
EYR + ++P L LD F L S+ ++ A+ + K + + K+ A++ E
Sbjct: 139 EYRQRILALVPSLEVLD--FKLVSQAEKAQAVKDHVAVMKKIKEDNRQIHQRKKKALAAE 196
>sp|Q7ZUP0|AN32A_DANRE Acidic leucine-rich nuclear phosphoprotein 32 family member A
OS=Danio rerio GN=anp32a PE=2 SV=1
Length = 254
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 89 DLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIR 148
+LS N I + + PNL L L N+I++ ++ L+++ SL++L L+ + +
Sbjct: 70 ELSDNRISGGLEVLAGKCPNLTHLNLSGNKIKDLSTIEPLKKLESLKSLDLFNCEVTNLN 129
Query: 149 EYRAVVSTMIPQLVTLDSVFILPSEKQETNALNAEIRSYL 188
+YR V ++PQL LD +K++ A +++ +Y+
Sbjct: 130 DYRENVFKLLPQLTYLDGY-----DKEDKEAPDSDAEAYV 164
>sp|Q6DIQ3|PP1R7_XENTR Protein phosphatase 1 regulatory subunit 7 OS=Xenopus tropicalis
GN=ppp1r7 PE=2 SV=1
Length = 346
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 56 RSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLH 115
R L+LS N I ++ GL++ T LD L+ N IK ++ + L+ +++
Sbjct: 241 RELYLSDNGIQVIEGLENNNKLTTLD--------LASNRIKRIEN--IKHLSELQEFWMN 290
Query: 116 KNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFI 169
N +E + + L L+T+ L NP++K +YR + +P + +D+ F+
Sbjct: 291 DNLVENWSDLEELSGAPGLQTVYLERNPLQKDAQYRRKIMLALPSVRQIDATFV 344
>sp|Q6NUW5|AN32E_DANRE Acidic leucine-rich nuclear phosphoprotein 32 family member E
OS=Danio rerio GN=anp32e PE=1 SV=1
Length = 250
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 88 IDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKI 147
++LS NNI + + NL L L N+I+E ++ L+ + +L++L L+ I +
Sbjct: 69 LELSDNNISGTLETLAEKCANLTYLNLSGNKIKELSTLEALQNLKNLKSLDLFNCEITTL 128
Query: 148 REYRAVVSTMIPQLVTLDS 166
+YR + ++PQ+ LD
Sbjct: 129 EDYRESIFELLPQVTYLDG 147
>sp|Q6AYL8|LRIQ3_RAT Leucine-rich repeat and IQ domain-containing protein 3 OS=Rattus
norvegicus GN=Lrriq3 PE=2 SV=1
Length = 633
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 88 IDLSFNNIKNV-DKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEK 146
+DL N IK + D+ + NLK+LYLH N + ++ VL +L L+++ P+
Sbjct: 77 LDLHGNQIKTLPDRTFWNGLKNLKLLYLHDNGFAKLKNICVLSGCVNLVGLTMFDCPVSL 136
Query: 147 IREYRAVVSTMIPQLVTLDSVFILPSE 173
+ YR V+ I L LD I E
Sbjct: 137 KKGYRHVLVNSIWPLKALDHHVISDEE 163
>sp|Q28CU0|LRC23_XENTR Leucine-rich repeat-containing protein 23 OS=Xenopus tropicalis
GN=lrrc23 PE=2 SV=1
Length = 350
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 56 RSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLH 115
R L+L N IS + GL++LV+ T L L N ++++D + L+ L L
Sbjct: 219 RELYLGQNNISRLEGLEALVNLTTLH--------LRDNQLESLD-GFSEHLQALQYLNLR 269
Query: 116 KNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVF 168
N + + V L + LR L L NP E+ YR +PQL LD F
Sbjct: 270 SNMVAKLQEVQKLYCLPRLRALVLRENPCEEEEGYRMETLIALPQLERLDKDF 322
>sp|Q15813|TBCE_HUMAN Tubulin-specific chaperone E OS=Homo sapiens GN=TBCE PE=1 SV=1
Length = 527
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 106 FPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEK----IREYRAVVSTMIPQL 161
FP+LK L ++ NQI ++ L ++ SLR LS NP+ K R ++ I QL
Sbjct: 306 FPSLKYLVVNDNQISQWSFFNELEKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQL 365
Query: 162 VTLDSVFILPSEKQ 175
TL+ ILP E++
Sbjct: 366 KTLNKCEILPEERR 379
>sp|Q8CDN9|LRRC9_MOUSE Leucine-rich repeat-containing protein 9 OS=Mus musculus GN=Lrrc9
PE=2 SV=2
Length = 1456
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 18/126 (14%)
Query: 58 LWLSHNKISLVYGLDSLV--HRTILDPDLI-GWIDLSF-------------NNIKNVDKN 101
L+L N+IS V GLD+L+ ++D + I + D +F N ++ + K
Sbjct: 1221 LFLQGNEISQVEGLDNLIVLQELVVDHNRIRAFNDTAFSKPSSLLMLHLEENRLRELSK- 1279
Query: 102 MFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQL 161
+ L+ L+L N+I++ + L + SLR L++YGNPI + +R V+ +P L
Sbjct: 1280 -LQSLVKLEKLFLGYNKIQDITELEKLDVIPSLRELTVYGNPICRKMVHRHVLIFRLPNL 1338
Query: 162 VTLDSV 167
LD +
Sbjct: 1339 QMLDGI 1344
Score = 34.3 bits (77), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 58 LWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKN 117
LWL+HN I + GL +L + + D +L G N + ++ + + N L+ L L N
Sbjct: 125 LWLNHNMIKNIEGLQTL--KNLKDLNLAG------NLVSSIGRCLDPN-EQLEKLNLSGN 175
Query: 118 QIEEYLSVFVLRRVNSLRTLSL-----YGNPIEKIREYRAVVSTMIPQLVTLDS 166
QI + + L ++ L+ L L NP+ ++ Y V +P L LD+
Sbjct: 176 QITSFKDLTNLTKLTRLKDLCLNDPQYKSNPVCQLCNYSTHVLYHLPSLQRLDT 229
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 37/158 (23%)
Query: 60 LSHNKISLVYGLDSLVH--RTILDPDLIGWID----------LSFNN--IKNVDKNMFTN 105
S+N +S + GL+S V+ LD + I I+ LS NN + ++K+ F N
Sbjct: 906 FSNNNLSKMEGLESCVNLEELTLDGNCISKIEGITRLTKLSRLSMNNNLLTGLEKHTFDN 965
Query: 106 F--------PNLKI--------------LYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNP 143
N +I LY+ N I ++ L+ + +L L +YGN
Sbjct: 966 LLHLHSLSLENNRITSLSALQKTFTLIELYISNNYIAVNQEIYNLKGLCNLVILDMYGNI 1025
Query: 144 IEKIRE-YRAVVSTMIPQLVTLDSVFILPSEKQETNAL 180
I +E YR V +P+L LD V I SE + L
Sbjct: 1026 IIWNQENYRFFVIFHLPELKALDGVSIETSETETAKDL 1063
>sp|Q96M69|LRGUK_HUMAN Leucine-rich repeat and guanylate kinase domain-containing protein
OS=Homo sapiens GN=LRGUK PE=2 SV=1
Length = 825
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 58 LWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKN 117
L LS+N+I ++ GL+ L + +DLS N I ++ N L+++ L N
Sbjct: 263 LCLSNNQIEMITGLEDL--------KALQNLDLSHNQISSLQG--LENHDLLEVINLEDN 312
Query: 118 QIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEK 174
+I E + ++ + LR L+L NPI++ EY V M+ +L LD I EK
Sbjct: 313 KIAELREIEYIKNLPILRVLNLLENPIQEKSEYWFFVIFMLLRLTELDQKKIKVEEK 369
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 17/96 (17%)
Query: 48 MLVGRYDTRSLW---LSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDK-NMF 103
M+ G D ++L LSHN+IS + GL+ + DL+ I+L N I + +
Sbjct: 272 MITGLEDLKALQNLDLSHNQISSLQGLE--------NHDLLEVINLEDNKIAELREIEYI 323
Query: 104 TNFPNLKILYLHKNQIEE-----YLSVFVLRRVNSL 134
N P L++L L +N I+E + +F+L R+ L
Sbjct: 324 KNLPILRVLNLLENPIQEKSEYWFFVIFMLLRLTEL 359
>sp|P22194|SDS22_SCHPO Protein phosphatase 1 regulatory subunit SDS22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sds22 PE=1 SV=2
Length = 332
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 20 SFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTI 79
+F+++Q L +++Q +R+ + + + R L++SHN ++ G++ L + I
Sbjct: 187 NFEKLQKLSLLSIQS-----NRITQFENLACLSHCLRELYVSHNGLTSFSGIEVLENLEI 241
Query: 80 LDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVF-VLRRVNSLRTLS 138
L D+S N IK++ + NL L+ N++ + + L + L T+
Sbjct: 242 L--------DVSNNMIKHL--SYLAGLKNLVELWASNNELSSFQEIEDELSGLKKLETVY 291
Query: 139 LYGNPIEKIRE--YRAVVSTMIPQLVTLDSVFILPSEKQ 175
GNP++K YR V +PQL +D+ I + KQ
Sbjct: 292 FEGNPLQKTNPAVYRNKVRLCLPQLRQIDATIIPKTSKQ 330
>sp|P58727|TLR4_FELCA Toll-like receptor 4 OS=Felis catus GN=TLR4 PE=2 SV=1
Length = 833
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 88 IDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKI 147
+D+SFN ++N+ + F+NFP L++L L + +I + + + +N L L L GNPI+++
Sbjct: 59 LDMSFNPLRNLGSHSFSNFPELQVLDLSRCEI-QIIEDDAYQGLNHLSILILTGNPIQRL 117
Query: 148 --REYRAVVS--TMIPQLVTLDSVFILP----SEKQETNALNAEIRSYLLPKY 192
+ + S T++ + S+ P +E N + I S+ LP+Y
Sbjct: 118 FPGAFSGLSSLQTLVAVETNIASLEDFPIGHLKTLKELNVAHNLIHSFKLPEY 170
>sp|Q86X45|TILB_HUMAN Protein TILB homolog OS=Homo sapiens GN=LRRC6 PE=1 SV=3
Length = 466
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 54 DTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILY 113
D + L+L +N I + + L + +++L+ NNI+ ++ L L
Sbjct: 45 DLKILYLQNNLIGKIENVSKLKK--------LEYLNLALNNIEKIEN--LEGCEELAKLD 94
Query: 114 LHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSE 173
L N I E S+ L+ L+ L L GNP YR V +PQL LD I PSE
Sbjct: 95 LTVNFIGELSSIKNLQHNIHLKELFLMGNPCASFDHYREFVVATLPQLKWLDGKEIEPSE 154
Query: 174 K----QETNALNAEIR 185
+ Q+ + + +IR
Sbjct: 155 RIKALQDYSVIEPQIR 170
>sp|Q5RBD9|TBCE_PONAB Tubulin-specific chaperone E OS=Pongo abelii GN=TBCE PE=2 SV=1
Length = 527
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 106 FPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEK----IREYRAVVSTMIPQL 161
FP+LK L ++ NQI ++ L ++ SLR LS NP+ K R ++ I QL
Sbjct: 306 FPSLKYLVVNDNQISQWSFFNELDKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQL 365
Query: 162 VTLDSVFILPSEKQ 175
TL+ ILP E++
Sbjct: 366 KTLNKCEILPEERR 379
>sp|A6PVS8|LRIQ3_HUMAN Leucine-rich repeat and IQ domain-containing protein 3 OS=Homo
sapiens GN=LRRIQ3 PE=2 SV=1
Length = 624
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 88 IDLSFNNIKNVDKNMFTN-FPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEK 146
+DL N IK++ F N NLK+LYLH N + ++ VL +L L+++ P+
Sbjct: 77 LDLHGNQIKSLPNTKFWNGLKNLKLLYLHDNGFAKLKNICVLSACPTLIALTMFDCPVSL 136
Query: 147 IREYRAVVSTMIPQLVTLDSVFILPSE 173
+ YR V+ I L LD I E
Sbjct: 137 KKGYRHVLVNSIWPLKALDHHVISDEE 163
>sp|A6H759|LRC72_BOVIN Leucine-rich repeat-containing protein 72 OS=Bos taurus GN=LRRC72
PE=2 SV=1
Length = 288
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 58 LWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKN 117
LWL HNK+ +G+ L L +L NN D P+L IL LH N
Sbjct: 73 LWLHHNKL---HGITFLTRNYCL-------AELYLNNNAIFDIEGLHYLPSLHILLLHHN 122
Query: 118 Q-IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQ 175
+ I +V L+ + +L+TL+LY NP+ + YR + +P + LD + E++
Sbjct: 123 ELINLDATVKELKGMLNLKTLTLYQNPLCQYNLYRLYIIYHLPGVELLDRNQVTEKERR 181
>sp|Q9XHH2|DNAL1_CHLRE Dynein light chain 1, axonemal OS=Chlamydomonas reinhardtii GN=LC1
PE=1 SV=1
Length = 198
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 16/137 (11%)
Query: 49 LVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPN 108
L G + R L L N I + LD++ D + + +S+N I ++ N
Sbjct: 66 LSGMENLRILSLGRNLIKKIENLDAVA-------DTLEELWISYNQIASLSG--IEKLVN 116
Query: 109 LKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPI-------EKIREYRAVVSTMIPQL 161
L++LY+ N+I + + L ++ L L L GNP+ EYR V +P L
Sbjct: 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNL 176
Query: 162 VTLDSVFILPSEKQETN 178
LD + + E+++ N
Sbjct: 177 KKLDGMPVDVDEREQAN 193
>sp|Q5Y2C3|H2AY_TETTS Histone H2A.Y OS=Tetrahymena thermophila (strain SB210) GN=HTAY
PE=2 SV=2
Length = 388
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 82 PDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYG 141
P LI +DL FN I +L+ L L NQIEE + L ++ L L L
Sbjct: 75 PSLI-RLDLVFNKITGDQLQYLRGSRHLQTLMLGANQIEEIEDLKRLGQMRELIQLDLLN 133
Query: 142 NPIEKIREYRAVVSTMIPQLVTLDSV 167
NP+ YR +V + P LV LD++
Sbjct: 134 NPVVNTNNYRNLVFNLFPSLVILDTL 159
>sp|P34390|YLS5_CAEEL Uncharacterized protein F09G8.5 OS=Caenorhabditis elegans
GN=F09G8.5 PE=4 SV=2
Length = 461
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 84 LIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNP 143
L+ + LS N +K++ + NLK +YL KN +E + L+ + +LRTL + NP
Sbjct: 141 LLEVLSLSVNEVKSLAP--LQHCKNLKEVYLRKNCLESLDELEYLKELPNLRTLWIDENP 198
Query: 144 I--EKIREYRAVVSTMIPQLVTLDSVFILPSEKQET 177
E +EYR V ++P L LD + ++ QE
Sbjct: 199 CVGEGGQEYRRKVIRVLPNLTKLDDKPVTTTDHQEA 234
>sp|Q6PAF6|AN32A_XENLA Acidic leucine-rich nuclear phosphoprotein 32 family member A
OS=Xenopus laevis GN=anp32a PE=2 SV=1
Length = 244
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 89 DLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIR 148
+LS NNI + + PNL L L N+I++ ++ L+++ L++L L+ + +
Sbjct: 70 ELSDNNISGGLEVLAEKCPNLTHLNLSGNRIKDLSTIEPLKKLEHLKSLDLFNCEVTNLN 129
Query: 149 EYRAVVSTMIPQLVTLDS 166
+YR + ++PQL LD
Sbjct: 130 DYRENLFKLLPQLTYLDG 147
>sp|Q8BGA3|LRRT2_MOUSE Leucine-rich repeat transmembrane neuronal protein 2 OS=Mus
musculus GN=Lrrtm2 PE=2 SV=1
Length = 515
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 56 RSLWLSHNKIS-LVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYL 114
+L+L NKIS L G+D T+ DL G N IK +D +F PNLKIL +
Sbjct: 232 HTLFLQWNKISNLTCGMD-WTWSTLEKLDLTG------NEIKAIDLTVFETMPNLKILLM 284
Query: 115 HKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVS 155
N++ L +L + SL T+ L GN E A+ S
Sbjct: 285 DNNKLNS-LDSKILNSLKSLTTVGLSGNLWECSPRVCALAS 324
Score = 34.7 bits (78), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 24/131 (18%)
Query: 17 LDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVH 76
LDLSF Q+ SL P + G ++L L N L ++
Sbjct: 138 LDLSFNQLSSLH-----------------PELFYGLRKLQTLHLRSNS------LRTIPV 174
Query: 77 RTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRT 136
R D + ++DLS N ++++ +N F L+ L+L NQ+ + L R++SL T
Sbjct: 175 RLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFL-RLSSLHT 233
Query: 137 LSLYGNPIEKI 147
L L N I +
Sbjct: 234 LFLQWNKISNL 244
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,242,275
Number of Sequences: 539616
Number of extensions: 2964216
Number of successful extensions: 9724
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 8819
Number of HSP's gapped (non-prelim): 1034
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)