Query psy4162
Match_columns 210
No_of_seqs 151 out of 3290
Neff 9.8
Searched_HMMs 13730
Date Fri Aug 16 18:30:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4162.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/4162hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1a9na_ c.10.2.4 (A:) Spliceso 99.8 4.4E-21 3.2E-25 137.9 11.9 142 14-181 20-161 (162)
2 d1dcea3 c.10.2.2 (A:444-567) R 99.8 7.5E-19 5.5E-23 120.6 10.3 121 16-164 2-122 (124)
3 d1p9ag_ c.10.2.7 (G:) von Will 99.7 2.1E-17 1.5E-21 127.5 12.6 156 11-171 30-207 (266)
4 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 5.1E-18 3.7E-22 124.9 8.6 129 14-172 10-139 (192)
5 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 1.9E-17 1.4E-21 121.7 9.1 115 11-149 28-143 (192)
6 d1m9la_ c.10.3.1 (A:) Outer ar 99.6 1.6E-18 1.2E-22 128.2 -4.8 139 15-181 51-196 (198)
7 d1dcea3 c.10.2.2 (A:444-567) R 99.6 1.2E-15 8.9E-20 104.2 9.0 104 56-173 1-104 (124)
8 d1a9na_ c.10.2.4 (A:) Spliceso 99.6 1.3E-15 9.3E-20 108.9 8.4 112 52-175 17-128 (162)
9 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 3E-15 2.2E-19 116.1 11.1 144 19-172 88-238 (284)
10 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 3.5E-15 2.6E-19 115.7 10.9 153 11-173 31-215 (284)
11 d1xkua_ c.10.2.7 (A:) Decorin 99.5 7.6E-14 5.5E-18 108.9 11.8 157 11-172 30-255 (305)
12 d2omxa2 c.10.2.1 (A:37-235) In 99.5 9E-14 6.6E-18 102.3 11.2 139 15-173 43-186 (199)
13 d1p9ag_ c.10.2.7 (G:) von Will 99.5 3.1E-14 2.2E-18 109.4 8.8 143 15-172 13-161 (266)
14 d2ifga3 c.10.2.7 (A:36-191) Hi 99.5 6.9E-13 5.1E-17 93.8 12.9 110 15-150 11-121 (156)
15 d1h6ta2 c.10.2.1 (A:31-240) In 99.4 3.6E-13 2.6E-17 99.8 10.9 139 14-172 48-191 (210)
16 d2ifga3 c.10.2.7 (A:36-191) Hi 99.4 2.2E-13 1.6E-17 96.5 7.8 107 54-172 9-116 (156)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.4 1E-12 7.3E-17 96.5 11.4 139 17-173 23-164 (199)
18 d2omza2 c.10.2.1 (A:33-416) In 99.4 1.1E-12 7.8E-17 104.8 10.3 144 14-169 221-383 (384)
19 d1h6ta2 c.10.2.1 (A:31-240) In 99.4 2.2E-12 1.6E-16 95.5 11.2 106 50-173 65-170 (210)
20 d1h6ua2 c.10.2.1 (A:36-262) In 99.4 1.5E-12 1.1E-16 97.4 9.9 62 103-172 147-208 (227)
21 d1xkua_ c.10.2.7 (A:) Decorin 99.3 2.7E-12 2E-16 99.9 9.5 116 50-173 168-286 (305)
22 d1h6ua2 c.10.2.1 (A:36-262) In 99.3 8.7E-12 6.4E-16 93.1 11.1 79 79-167 147-225 (227)
23 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 9.4E-14 6.9E-18 102.2 -2.0 107 54-174 49-155 (198)
24 d2omza2 c.10.2.1 (A:33-416) In 99.2 4.5E-11 3.3E-15 95.2 11.3 141 14-173 199-365 (384)
25 d1ogqa_ c.10.2.8 (A:) Polygala 99.1 3.9E-11 2.8E-15 93.6 6.4 129 15-171 53-186 (313)
26 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.1 5.5E-11 4E-15 89.3 6.5 112 13-147 30-143 (242)
27 d1ogqa_ c.10.2.8 (A:) Polygala 99.1 8E-11 5.8E-15 91.8 7.6 143 14-170 151-302 (313)
28 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.0 3.2E-10 2.4E-14 84.9 8.3 108 15-149 11-120 (242)
29 d1koha1 c.10.2.3 (A:201-362) m 98.9 2.7E-11 2E-15 85.9 -1.8 93 77-170 59-157 (162)
30 d1jl5a_ c.10.2.6 (A:) Leucine 98.9 5.2E-09 3.8E-13 81.7 10.0 97 14-148 40-136 (353)
31 d1jl5a_ c.10.2.6 (A:) Leucine 98.8 1E-08 7.6E-13 80.0 9.6 95 54-172 39-133 (353)
32 d1koha1 c.10.2.3 (A:201-362) m 98.5 1.1E-08 7.7E-13 72.2 0.5 85 50-138 62-152 (162)
33 d2astb2 c.10.1.3 (B:2136-2419) 98.4 2E-07 1.4E-11 71.4 7.4 89 50-143 43-132 (284)
34 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.3 2.3E-07 1.7E-11 72.6 4.9 121 51-173 184-316 (344)
35 d2astb2 c.10.1.3 (B:2136-2419) 98.2 6.3E-07 4.6E-11 68.4 5.2 148 14-170 48-211 (284)
36 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.2 1.6E-07 1.1E-11 75.4 1.8 115 55-175 4-128 (460)
37 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.1 8.3E-07 6E-11 71.1 4.1 113 15-146 5-126 (460)
38 d1pgva_ c.10.1.1 (A:) Tropomod 98.0 1.1E-05 7.8E-10 56.5 7.9 121 53-175 15-147 (167)
39 d2ca6a1 c.10.1.2 (A:2-345) Rna 97.9 6.3E-06 4.6E-10 64.2 5.1 121 53-175 158-289 (344)
40 d1io0a_ c.10.1.1 (A:) Tropomod 97.4 0.00013 9.8E-09 50.5 5.5 122 52-175 16-148 (166)
41 d1pgva_ c.10.1.1 (A:) Tropomod 96.6 0.00066 4.8E-08 47.0 3.2 93 78-170 10-111 (167)
42 d1io0a_ c.10.1.1 (A:) Tropomod 95.1 0.008 5.8E-07 41.0 3.6 99 77-175 11-120 (166)
No 1
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=4.4e-21 Score=137.95 Aligned_cols=142 Identities=23% Similarity=0.266 Sum_probs=126.9
Q ss_pred CcceeCCCCCccccchhhhcccCCcccccCCCCCCCCCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCC
Q psy4162 14 KIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFN 93 (210)
Q Consensus 14 ~~~L~ls~n~l~~l~~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n 93 (210)
...|++++|+|+.++.. +..+++ |+.|++++|+|+.+++ +..+++|+.|++++|
T Consensus 20 lr~L~L~~n~I~~i~~~-~~~l~~-----------------L~~L~Ls~N~i~~l~~--------~~~l~~L~~L~ls~N 73 (162)
T d1a9na_ 20 DRELDLRGYKIPVIENL-GATLDQ-----------------FDAIDFSDNEIRKLDG--------FPLLRRLKTLLVNNN 73 (162)
T ss_dssp CEEEECTTSCCCSCCCG-GGGTTC-----------------CSEEECCSSCCCEECC--------CCCCSSCCEEECCSS
T ss_pred CcEEECCCCCCCccCcc-cccccc-----------------CCEEECCCCCCCccCC--------cccCcchhhhhcccc
Confidence 45699999999999764 344566 9999999999999864 667899999999999
Q ss_pred CCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccchHHHHHHhCcCcccccCCCCCHHH
Q psy4162 94 NIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSE 173 (210)
Q Consensus 94 ~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~~~~~ 173 (210)
+++.+++..+..+++|+.|++++|.++.++.+..+..+++|+.+++++|+++..+.+|...++.+|+|+.||...+...|
T Consensus 74 ~i~~l~~~~~~~l~~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD~~~i~~~e 153 (162)
T d1a9na_ 74 RICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKE 153 (162)
T ss_dssp CCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred cccCCCccccccccccccceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeCCCCCCHHH
Confidence 99999988778899999999999999998866778999999999999999999999988899999999999999999999
Q ss_pred HHHHHHHH
Q psy4162 174 KQETNALN 181 (210)
Q Consensus 174 ~~~~~~~~ 181 (210)
+..++.++
T Consensus 154 r~~A~~~~ 161 (162)
T d1a9na_ 154 RQEAEKMF 161 (162)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 98887654
No 2
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.78 E-value=7.5e-19 Score=120.56 Aligned_cols=121 Identities=23% Similarity=0.337 Sum_probs=106.7
Q ss_pred ceeCCCCCccccchhhhcccCCcccccCCCCCCCCCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCCC
Q psy4162 16 PLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNI 95 (210)
Q Consensus 16 ~L~ls~n~l~~l~~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i 95 (210)
.|++++|+|+.++.. ..++. |+.|++++|+|+.++ ..+..+++|+.|++++|++
T Consensus 2 ~L~Ls~n~l~~l~~l--~~l~~-----------------L~~L~ls~N~l~~lp-------~~~~~l~~L~~L~l~~N~i 55 (124)
T d1dcea3 2 VLHLAHKDLTVLCHL--EQLLL-----------------VTHLDLSHNRLRALP-------PALAALRCLEVLQASDNAL 55 (124)
T ss_dssp EEECTTSCCSSCCCG--GGGTT-----------------CCEEECCSSCCCCCC-------GGGGGCTTCCEEECCSSCC
T ss_pred EEEcCCCCCCCCccc--ccCCC-----------------CCEEECCCCccCcch-------hhhhhhhcccccccccccc
Confidence 589999999999864 45677 999999999999987 5678889999999999999
Q ss_pred CcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccchHHHHHHhCcCcccc
Q psy4162 96 KNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTL 164 (210)
Q Consensus 96 ~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L 164 (210)
+.++. +..+++|+.+++++|+++.++.+..+..+++|+.+++++|+++..+.++......+|+|+.+
T Consensus 56 ~~l~~--~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 56 ENVDG--VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CCCGG--GTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred cccCc--cccccccCeEECCCCccCCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 99865 88999999999999999998765678899999999999999998877776788889988765
No 3
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=2.1e-17 Score=127.51 Aligned_cols=156 Identities=20% Similarity=0.058 Sum_probs=116.3
Q ss_pred CCCCcceeCCCCCccccchhhhcccCC-cccccCCCCCC----CCCCCCccEEEccCCccccccCCc-------------
Q psy4162 11 PEFKIPLDLSFQQIQSLDKVAVQKLKP-NVHRLGESPPM----LVGRYDTRSLWLSHNKISLVYGLD------------- 72 (210)
Q Consensus 11 ~~~~~~L~ls~n~l~~l~~~~~~~l~~-~~~~~~~~~~~----~~~l~~L~~L~ls~n~l~~~~~l~------------- 72 (210)
|...+.|++++|+|+.++...|.++++ ..+.+.-..+. ++.+++|+.|++++|+++..+...
T Consensus 30 p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~ 109 (266)
T d1p9ag_ 30 PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSF 109 (266)
T ss_dssp CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCS
T ss_pred CcCCCEEECcCCcCCCcCHHHhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 345678999999999999888877666 22222222222 277888899999988887654310
Q ss_pred ----hhhhhccCCCCCCCEEECcCCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCcc
Q psy4162 73 ----SLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIR 148 (210)
Q Consensus 73 ----~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 148 (210)
.+....+..+.+++.|++++|.++.+++..+..+++++.+++++|+++.+++ ..+..+++|+.|+|++|.++.+|
T Consensus 110 ~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~L~~lp 188 (266)
T d1p9ag_ 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPA-GLLNGLENLDTLLLQENSLYTIP 188 (266)
T ss_dssp SCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCT-TTTTTCTTCCEEECCSSCCCCCC
T ss_pred cccceeeccccccccccccccccccccceeccccccccccchhcccccccccccCc-cccccccccceeecccCCCcccC
Confidence 0112344555666677777777777777767778889999999999998885 77889999999999999999998
Q ss_pred chHHHHHHhCcCcccccCCCCCH
Q psy4162 149 EYRAVVSTMIPQLVTLDSVFILP 171 (210)
Q Consensus 149 ~~~~~~l~~l~~L~~L~l~~~~~ 171 (210)
. .+..+++|+.|++++|+.
T Consensus 189 ~----~~~~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 189 K----GFFGSHLLPFAFLHGNPW 207 (266)
T ss_dssp T----TTTTTCCCSEEECCSCCB
T ss_pred h----hHCCCCCCCEEEecCCCC
Confidence 7 567889999999999963
No 4
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.73 E-value=5.1e-18 Score=124.88 Aligned_cols=129 Identities=18% Similarity=0.193 Sum_probs=103.4
Q ss_pred CcceeCCCCCccccchhhhcccCCcccccCCCCCCCCCCCCccEEEccCCcccc-ccCCchhhhhccCCCCCCCEEECcC
Q psy4162 14 KIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISL-VYGLDSLVHRTILDPDLIGWIDLSF 92 (210)
Q Consensus 14 ~~~L~ls~n~l~~l~~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~ls~n~l~~-~~~l~~~~~~~~~~l~~L~~L~Ls~ 92 (210)
..+++.++++++++|.... ++ ++.|+|++|+|+. ++. ..|..+++|+.|++++
T Consensus 10 ~~~v~Cs~~~L~~iP~~lp---~~-----------------l~~L~Ls~N~i~~~~~~------~~f~~l~~L~~L~L~~ 63 (192)
T d1w8aa_ 10 GTTVDCTGRGLKEIPRDIP---LH-----------------TTELLLNDNELGRISSD------GLFGRLPHLVKLELKR 63 (192)
T ss_dssp TTEEECTTSCCSSCCSCCC---TT-----------------CSEEECCSCCCCSBCCS------CSGGGCTTCCEEECCS
T ss_pred CCEEEEeCCCcCccCCCCC---CC-----------------CCEEEeCCCCCcccccc------cccCCCceEeeeeccc
Confidence 3568999999999986432 34 8888888888875 444 6677888888888888
Q ss_pred CCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccchHHHHHHhCcCcccccCCCCCHH
Q psy4162 93 NNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPS 172 (210)
Q Consensus 93 n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 172 (210)
|++..+++..+..+++|+.|++++|+++.+++ ..|.++++|+.|+|++|.++.++. ..+..+++|+.|++++|+..
T Consensus 64 N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~-~~F~~l~~L~~L~L~~N~l~~i~~---~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 64 NQLTGIEPNAFEGASHIQELQLGENKIKEISN-KMFLGLHQLKTLNLYDNQISCVMP---GSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp SCCCCBCTTTTTTCTTCCEEECCSCCCCEECS-SSSTTCTTCCEEECCSSCCCEECT---TSSTTCTTCCEEECTTCCBC
T ss_pred cccccccccccccccccceeeeccccccccCH-HHHhCCCcccccccCCccccccCH---HHhcCCcccccccccccccc
Confidence 88888888778888888888888888888876 778888888888888888888766 46778888888888888754
No 5
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.70 E-value=1.9e-17 Score=121.72 Aligned_cols=115 Identities=24% Similarity=0.254 Sum_probs=105.2
Q ss_pred CCCCcceeCCCCCccc-cchhhhcccCCcccccCCCCCCCCCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEE
Q psy4162 11 PEFKIPLDLSFQQIQS-LDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWID 89 (210)
Q Consensus 11 ~~~~~~L~ls~n~l~~-l~~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~ 89 (210)
|...+.|++++|+|+. ++...|.++++ |+.|++++|.+..++. ..|..++.|+.|+
T Consensus 28 p~~l~~L~Ls~N~i~~~~~~~~f~~l~~-----------------L~~L~L~~N~i~~~~~------~~~~~~~~L~~L~ 84 (192)
T d1w8aa_ 28 PLHTTELLLNDNELGRISSDGLFGRLPH-----------------LVKLELKRNQLTGIEP------NAFEGASHIQELQ 84 (192)
T ss_dssp CTTCSEEECCSCCCCSBCCSCSGGGCTT-----------------CCEEECCSSCCCCBCT------TTTTTCTTCCEEE
T ss_pred CCCCCEEEeCCCCCcccccccccCCCce-----------------Eeeeeccccccccccc------cccccccccceee
Confidence 3467789999999986 66777777777 9999999999999987 8999999999999
Q ss_pred CcCCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccc
Q psy4162 90 LSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIRE 149 (210)
Q Consensus 90 Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 149 (210)
+++|+++.+++..|..+++|+.|+|++|+|+.+++ +.|..+++|+++++++|++.+...
T Consensus 85 Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~-~~f~~l~~L~~l~L~~N~~~~~~~ 143 (192)
T d1w8aa_ 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMP-GSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECT-TSSTTCTTCCEEECTTCCBCCSGG
T ss_pred eccccccccCHHHHhCCCcccccccCCccccccCH-HHhcCCcccccccccccccccccc
Confidence 99999999999999999999999999999999987 889999999999999999998765
No 6
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.62 E-value=1.6e-18 Score=128.25 Aligned_cols=139 Identities=27% Similarity=0.404 Sum_probs=107.4
Q ss_pred cceeCCCCCccccchhhhcccCCcccccCCCCCCCCCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCC
Q psy4162 15 IPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNN 94 (210)
Q Consensus 15 ~~L~ls~n~l~~l~~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~ 94 (210)
..|++++|+|+.++. +.++++ |+.|++++|.|+.++++. ..++.|+.|++++|+
T Consensus 51 ~~L~Ls~n~I~~i~~--l~~l~~-----------------L~~L~Ls~N~i~~i~~~~-------~~~~~L~~L~l~~N~ 104 (198)
T d1m9la_ 51 KHLALSTNNIEKISS--LSGMEN-----------------LRILSLGRNLIKKIENLD-------AVADTLEELWISYNQ 104 (198)
T ss_dssp CEEECSEEEESCCCC--HHHHTT-----------------CCEEECCEEEECSCSSHH-------HHHHHCCEEECSEEE
T ss_pred ceeECcccCCCCccc--ccCCcc-----------------ccChhhcccccccccccc-------ccccccccccccccc
Confidence 346677777766654 334455 999999999998887532 223578999999999
Q ss_pred CCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCc-------cchHHHHHHhCcCcccccCC
Q psy4162 95 IKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKI-------REYRAVVSTMIPQLVTLDSV 167 (210)
Q Consensus 95 i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~-------~~~~~~~l~~l~~L~~L~l~ 167 (210)
++.+++ +..+++|+.|++++|.++.++.+..+..+++|+.|++++|++... +.||...+..+|+|+.||..
T Consensus 105 i~~l~~--~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD~~ 182 (198)
T d1m9la_ 105 IASLSG--IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLDGM 182 (198)
T ss_dssp CCCHHH--HHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEESSG
T ss_pred cccccc--ccccccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeCCc
Confidence 988754 677889999999999998887556788899999999999987532 44666778999999999998
Q ss_pred CCCHHHHHHHHHHH
Q psy4162 168 FILPSEKQETNALN 181 (210)
Q Consensus 168 ~~~~~~~~~~~~~~ 181 (210)
.+...||..++.+.
T Consensus 183 ~I~~~er~~A~~~~ 196 (198)
T d1m9la_ 183 PVDVDEREQANVAR 196 (198)
T ss_dssp GGTTTTTTHHHHHH
T ss_pred cCCHHHHHHHHHhh
Confidence 88888888887764
No 7
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.61 E-value=1.2e-15 Score=104.23 Aligned_cols=104 Identities=20% Similarity=0.271 Sum_probs=91.0
Q ss_pred cEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcC
Q psy4162 56 RSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLR 135 (210)
Q Consensus 56 ~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~ 135 (210)
+.|++++|.++.+++ +..+++|++|++++|+++.+++. +..+++|+.|++++|.++.++. +..+++|+
T Consensus 1 R~L~Ls~n~l~~l~~--------l~~l~~L~~L~ls~N~l~~lp~~-~~~l~~L~~L~l~~N~i~~l~~---~~~l~~L~ 68 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH--------LEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALENVDG---VANLPRLQ 68 (124)
T ss_dssp SEEECTTSCCSSCCC--------GGGGTTCCEEECCSSCCCCCCGG-GGGCTTCCEEECCSSCCCCCGG---GTTCSSCC
T ss_pred CEEEcCCCCCCCCcc--------cccCCCCCEEECCCCccCcchhh-hhhhhcccccccccccccccCc---cccccccC
Confidence 579999999998875 45668999999999999999875 8889999999999999998863 78899999
Q ss_pred EEeeeCCCCCCccchHHHHHHhCcCcccccCCCCCHHH
Q psy4162 136 TLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSE 173 (210)
Q Consensus 136 ~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~~~~~ 173 (210)
.+++++|++..++.. ..+..+++|+.|++++|++.+
T Consensus 69 ~L~l~~N~i~~~~~~--~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 69 ELLLCNNRLQQSAAI--QPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp EEECCSSCCCSSSTT--GGGGGCTTCCEEECTTSGGGG
T ss_pred eEECCCCccCCCCCc--hhhcCCCCCCEEECCCCcCCc
Confidence 999999999987652 257889999999999998754
No 8
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.3e-15 Score=108.94 Aligned_cols=112 Identities=22% Similarity=0.183 Sum_probs=96.8
Q ss_pred CCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCCCCcCCcccccCCCCccEEEccCCccCccccccccccC
Q psy4162 52 RYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRV 131 (210)
Q Consensus 52 l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l 131 (210)
+..++.|++++|+|+.+++ .+..+++|+.|++++|+|+.++. +..+++|+.|++++|.++.+++ ..+..+
T Consensus 17 ~~~lr~L~L~~n~I~~i~~-------~~~~l~~L~~L~Ls~N~i~~l~~--~~~l~~L~~L~ls~N~i~~l~~-~~~~~l 86 (162)
T d1a9na_ 17 AVRDRELDLRGYKIPVIEN-------LGATLDQFDAIDFSDNEIRKLDG--FPLLRRLKTLLVNNNRICRIGE-GLDQAL 86 (162)
T ss_dssp TTSCEEEECTTSCCCSCCC-------GGGGTTCCSEEECCSSCCCEECC--CCCCSSCCEEECCSSCCCEECS-CHHHHC
T ss_pred cCcCcEEECCCCCCCccCc-------cccccccCCEEECCCCCCCccCC--cccCcchhhhhcccccccCCCc-cccccc
Confidence 3349999999999999974 45667899999999999999864 8889999999999999999885 667789
Q ss_pred CCcCEEeeeCCCCCCccchHHHHHHhCcCcccccCCCCCHHHHH
Q psy4162 132 NSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQ 175 (210)
Q Consensus 132 ~~L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~ 175 (210)
++|+.|++++|.++.+++. ..+..+++|+.|++++|++.+..
T Consensus 87 ~~L~~L~L~~N~i~~~~~l--~~l~~l~~L~~L~l~~N~i~~~~ 128 (162)
T d1a9na_ 87 PDLTELILTNNSLVELGDL--DPLASLKSLTYLCILRNPVTNKK 128 (162)
T ss_dssp TTCCEEECCSCCCCCGGGG--GGGGGCTTCCEEECCSSGGGGST
T ss_pred cccccceeccccccccccc--cccccccccchhhcCCCcccccc
Confidence 9999999999999988653 24789999999999999886644
No 9
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=3e-15 Score=116.08 Aligned_cols=144 Identities=20% Similarity=0.195 Sum_probs=119.8
Q ss_pred CCCCCccccchhhhcccCC-cccccCCCCC---C---CCCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECc
Q psy4162 19 LSFQQIQSLDKVAVQKLKP-NVHRLGESPP---M---LVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLS 91 (210)
Q Consensus 19 ls~n~l~~l~~~~~~~l~~-~~~~~~~~~~---~---~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls 91 (210)
...+.++.+++..+.++++ ..+.+..... . ...+.+|+.+++++|+++.++. ..|..+++|+.|+++
T Consensus 88 ~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~------~~f~~~~~L~~L~l~ 161 (284)
T d1ozna_ 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPD------DTFRDLGNLTHLFLH 161 (284)
T ss_dssp CSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT------TTTTTCTTCCEEECC
T ss_pred ccccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccCh------hHhccccchhhcccc
Confidence 4566777777777766655 2222222221 1 2567789999999999999987 788899999999999
Q ss_pred CCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccchHHHHHHhCcCcccccCCCCCH
Q psy4162 92 FNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILP 171 (210)
Q Consensus 92 ~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~~~ 171 (210)
+|+++.+++..|..+++|+.+++++|++..+.+ ..+..+++|+.|++++|.+..++. ..+..+++|+.|++++|+.
T Consensus 162 ~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~-~~f~~l~~L~~L~l~~N~i~~~~~---~~~~~~~~L~~L~l~~N~l 237 (284)
T d1ozna_ 162 GNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP-HAFRDLGRLMTLYLFANNLSALPT---EALAPLRALQYLRLNDNPW 237 (284)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCSCCCH---HHHTTCTTCCEEECCSSCE
T ss_pred cCcccccchhhhccccccchhhhhhccccccCh-hHhhhhhhcccccccccccccccc---cccccccccCEEEecCCCC
Confidence 999999999889999999999999999999876 889999999999999999999887 5789999999999999976
Q ss_pred H
Q psy4162 172 S 172 (210)
Q Consensus 172 ~ 172 (210)
.
T Consensus 238 ~ 238 (284)
T d1ozna_ 238 V 238 (284)
T ss_dssp E
T ss_pred C
Confidence 4
No 10
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=3.5e-15 Score=115.69 Aligned_cols=153 Identities=18% Similarity=0.162 Sum_probs=121.2
Q ss_pred CCCCcceeCCCCCccccchhhhcccCC-cccccC----------------------------CCCCC---CCCCCCccEE
Q psy4162 11 PEFKIPLDLSFQQIQSLDKVAVQKLKP-NVHRLG----------------------------ESPPM---LVGRYDTRSL 58 (210)
Q Consensus 11 ~~~~~~L~ls~n~l~~l~~~~~~~l~~-~~~~~~----------------------------~~~~~---~~~l~~L~~L 58 (210)
|...+.|++++|+|+.+++..|.++++ ..+.+. +.... ++++++|+.|
T Consensus 31 p~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L 110 (284)
T d1ozna_ 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (284)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEE
Confidence 345567899999998888876666554 000000 00111 2667889999
Q ss_pred EccCCccccccCCchhhhhccCCCCCCCEEECcCCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEe
Q psy4162 59 WLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLS 138 (210)
Q Consensus 59 ~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~ 138 (210)
++++|.+..++. ..+..+..|+.+++++|+++.+++..|..+.+|+.|++++|.++.+++ ..+.++++|+.++
T Consensus 111 ~l~~n~~~~~~~------~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~-~~f~~l~~L~~l~ 183 (284)
T d1ozna_ 111 HLDRCGLQELGP------GLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE-RAFRGLHSLDRLL 183 (284)
T ss_dssp ECTTSCCCCCCT------TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT-TTTTTCTTCCEEE
T ss_pred ecCCcccccccc------cccchhcccchhhhccccccccChhHhccccchhhcccccCcccccch-hhhccccccchhh
Confidence 999999888776 777888899999999999999988888889999999999999999886 8889999999999
Q ss_pred eeCCCCCCccchHHHHHHhCcCcccccCCCCCHHH
Q psy4162 139 LYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSE 173 (210)
Q Consensus 139 l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~~~~~ 173 (210)
+++|.+..+.+ ..+..+++|+.||++.|.+..
T Consensus 184 l~~N~l~~i~~---~~f~~l~~L~~L~l~~N~i~~ 215 (284)
T d1ozna_ 184 LHQNRVAHVHP---HAFRDLGRLMTLYLFANNLSA 215 (284)
T ss_dssp CCSSCCCEECT---TTTTTCTTCCEEECCSSCCSC
T ss_pred hhhccccccCh---hHhhhhhhccccccccccccc
Confidence 99999998755 378999999999999988754
No 11
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.50 E-value=7.6e-14 Score=108.93 Aligned_cols=157 Identities=20% Similarity=0.128 Sum_probs=98.5
Q ss_pred CCCCcceeCCCCCccccchhhhcccCC-ccccc---CCCCCC---CCCCCCccEEEccCCccccccCCc-----------
Q psy4162 11 PEFKIPLDLSFQQIQSLDKVAVQKLKP-NVHRL---GESPPM---LVGRYDTRSLWLSHNKISLVYGLD----------- 72 (210)
Q Consensus 11 ~~~~~~L~ls~n~l~~l~~~~~~~l~~-~~~~~---~~~~~~---~~~l~~L~~L~ls~n~l~~~~~l~----------- 72 (210)
|...+.|++++|+|+.+++..|.++++ ..+.+ .+.... +..+..|+.|++++|+++.++...
T Consensus 30 ~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~~~~~l~~L~~~~ 109 (305)
T d1xkua_ 30 PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHE 109 (305)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSCCTTCCEEECCS
T ss_pred CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCcCccchhhhhhhhhccc
Confidence 345677999999999999887777666 11122 122221 377899999999999988764410
Q ss_pred ----hhh--------------------------hhccCCCCCCCEEECcCCCCC---------------------cCCcc
Q psy4162 73 ----SLV--------------------------HRTILDPDLIGWIDLSFNNIK---------------------NVDKN 101 (210)
Q Consensus 73 ----~~~--------------------------~~~~~~l~~L~~L~Ls~n~i~---------------------~~~~~ 101 (210)
.+. ...+..++.|+.+++++|.+. ...+.
T Consensus 110 n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~~~~~L~~L~l~~n~~~~~~~~ 189 (305)
T d1xkua_ 110 NEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAA 189 (305)
T ss_dssp SCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEECTG
T ss_pred cchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccccCcccCCccCEEECCCCcCCCCChh
Confidence 000 112333344444444444443 33333
Q ss_pred cccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccchHHHHHHhCcCcccccCCCCCHH
Q psy4162 102 MFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPS 172 (210)
Q Consensus 102 ~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 172 (210)
.+..++.++.|++++|.+.+.++ ..+.++++|+.|++++|+++.++. .+..+++|+.|+++.|.+.
T Consensus 190 ~~~~~~~l~~L~~s~n~l~~~~~-~~~~~l~~L~~L~L~~N~L~~lp~----~l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 190 SLKGLNNLAKLGLSFNSISAVDN-GSLANTPHLRELHLNNNKLVKVPG----GLADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp GGTTCTTCCEEECCSSCCCEECT-TTGGGSTTCCEEECCSSCCSSCCT----TTTTCSSCCEEECCSSCCC
T ss_pred Hhhcccccccccccccccccccc-ccccccccceeeeccccccccccc----ccccccCCCEEECCCCccC
Confidence 45556666777777777766654 566677777777777777777765 5677777777777777643
No 12
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.50 E-value=9e-14 Score=102.28 Aligned_cols=139 Identities=21% Similarity=0.248 Sum_probs=97.3
Q ss_pred cceeCCCCCccccchhhhcccCC-cccccCCCCCC----CCCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEE
Q psy4162 15 IPLDLSFQQIQSLDKVAVQKLKP-NVHRLGESPPM----LVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWID 89 (210)
Q Consensus 15 ~~L~ls~n~l~~l~~~~~~~l~~-~~~~~~~~~~~----~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~ 89 (210)
..|++++|+++.++... .+++ ..+.++-..+. .+++++|+.|++++|.+..++ .+..++.|+.++
T Consensus 43 ~~L~l~~~~i~~l~~l~--~l~nL~~L~Ls~N~l~~~~~l~~l~~L~~L~l~~n~~~~~~--------~l~~l~~L~~L~ 112 (199)
T d2omxa2 43 TTLQADRLGIKSIDGVE--YLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADIT--------PLANLTNLTGLT 112 (199)
T ss_dssp CEEECTTSCCCCCTTGG--GCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCG--------GGTTCTTCSEEE
T ss_pred CEEECCCCCCCCccccc--cCCCcCcCccccccccCcccccCCccccccccccccccccc--------cccccccccccc
Confidence 45888999888877643 3344 11111111111 256666777777777776654 256667888888
Q ss_pred CcCCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccchHHHHHHhCcCcccccCCCC
Q psy4162 90 LSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFI 169 (210)
Q Consensus 90 Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~ 169 (210)
+++|.+..+.+ +..+++|+.+++++|++..++. +..+++|+.|++.+|.++++++ +..+++|+.|++++|
T Consensus 113 l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~---l~~~~~L~~L~l~~n~l~~l~~-----l~~l~~L~~L~ls~N 182 (199)
T d2omxa2 113 LFNNQITDIDP--LKNLTNLNRLELSSNTISDISA---LSGLTSLQQLNFSSNQVTDLKP-----LANLTTLERLDISSN 182 (199)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCCCCGG-----GTTCTTCCEEECCSS
T ss_pred ccccccccccc--cchhhhhHHhhhhhhhhccccc---ccccccccccccccccccCCcc-----ccCCCCCCEEECCCC
Confidence 88887776654 6778888888888888876543 6678888888888888888765 678888999999888
Q ss_pred CHHH
Q psy4162 170 LPSE 173 (210)
Q Consensus 170 ~~~~ 173 (210)
++.+
T Consensus 183 ~i~~ 186 (199)
T d2omxa2 183 KVSD 186 (199)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7644
No 13
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=3.1e-14 Score=109.38 Aligned_cols=143 Identities=18% Similarity=0.177 Sum_probs=99.5
Q ss_pred cceeCCCCCccccchhhhcccCCcccccCCCCC---C---CCCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEE
Q psy4162 15 IPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPP---M---LVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWI 88 (210)
Q Consensus 15 ~~L~ls~n~l~~l~~~~~~~l~~~~~~~~~~~~---~---~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L 88 (210)
.++|.++++|+.+|.....++. .+.+.-..+ . +.++++|+.|++++|+|+.++. +..+++|+.|
T Consensus 13 ~~v~C~~~~L~~iP~~lp~~l~--~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~--------~~~l~~L~~L 82 (266)
T d1p9ag_ 13 LEVNCDKRNLTALPPDLPKDTT--ILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--------DGTLPVLGTL 82 (266)
T ss_dssp CEEECTTSCCSSCCSCCCTTCC--EEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--------CSCCTTCCEE
T ss_pred eEEEccCCCCCeeCcCcCcCCC--EEECcCCcCCCcCHHHhhcccccccccccccccccccc--------cccccccccc
Confidence 4589999999999864322111 111111111 1 2667778888888887777653 3456778888
Q ss_pred ECcCCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccchHHHHHHhCcCcccccCCC
Q psy4162 89 DLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVF 168 (210)
Q Consensus 89 ~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~ 168 (210)
++++|+++..+.. +..+++|+.|++++|.+..+.. ..+..+.++..|++++|.+..++. ..+..++.++.+++++
T Consensus 83 ~Ls~N~l~~~~~~-~~~l~~L~~L~l~~~~~~~~~~-~~~~~l~~l~~L~l~~n~l~~l~~---~~~~~l~~l~~l~l~~ 157 (266)
T d1p9ag_ 83 DLSHNQLQSLPLL-GQTLPALTVLDVSFNRLTSLPL-GALRGLGELQELYLKGNELKTLPP---GLLTPTPKLEKLSLAN 157 (266)
T ss_dssp ECCSSCCSSCCCC-TTTCTTCCEEECCSSCCCCCCS-STTTTCTTCCEEECTTSCCCCCCT---TTTTTCTTCCEEECTT
T ss_pred ccccccccccccc-cccccccccccccccccceeec-cccccccccccccccccccceecc---ccccccccchhccccc
Confidence 8888877776554 6677788888888887777765 666777888888888888887766 4567788888888888
Q ss_pred CCHH
Q psy4162 169 ILPS 172 (210)
Q Consensus 169 ~~~~ 172 (210)
|.+.
T Consensus 158 N~l~ 161 (266)
T d1p9ag_ 158 NNLT 161 (266)
T ss_dssp SCCS
T ss_pred cccc
Confidence 8754
No 14
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=6.9e-13 Score=93.82 Aligned_cols=110 Identities=16% Similarity=0.153 Sum_probs=89.9
Q ss_pred cceeCCCCCccccchhhhcccCCcccccCCCCCCCCCCCCccEEEccCC-ccccccCCchhhhhccCCCCCCCEEECcCC
Q psy4162 15 IPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHN-KISLVYGLDSLVHRTILDPDLIGWIDLSFN 93 (210)
Q Consensus 15 ~~L~ls~n~l~~l~~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~ls~n-~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n 93 (210)
..++.+.+++.+.+.. +.++++ |+.|++++| .++.++. ..|.++++|+.|++++|
T Consensus 11 ~~l~c~~~~~~~~p~~-l~~l~~-----------------l~~L~l~~n~~l~~i~~------~~f~~l~~L~~L~Ls~N 66 (156)
T d2ifga3 11 SGLRCTRDGALDSLHH-LPGAEN-----------------LTELYIENQQHLQHLEL------RDLRGLGELRNLTIVKS 66 (156)
T ss_dssp SCEECCSSCCCTTTTT-SCSCSC-----------------CSEEECCSCSSCCEECG------GGSCSCCCCSEEECCSS
T ss_pred CeEEecCCCCccCccc-ccCccc-----------------cCeeecCCCccccccCc------hhhccccccCcceeecc
Confidence 4477777777766543 333444 999999766 5999887 88999999999999999
Q ss_pred CCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccch
Q psy4162 94 NIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREY 150 (210)
Q Consensus 94 ~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 150 (210)
+|+.+++..|..+++|+.|+|++|+++.++. ..+..+ +|+.|+|++|++.+....
T Consensus 67 ~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~-~~~~~~-~l~~L~L~~Np~~C~C~~ 121 (156)
T d2ifga3 67 GLRFVAPDAFHFTPRLSRLNLSFNALESLSW-KTVQGL-SLQELVLSGNPLHCSCAL 121 (156)
T ss_dssp CCCEECTTGGGSCSCCCEEECCSSCCSCCCS-TTTCSC-CCCEEECCSSCCCCCGGG
T ss_pred ccCCcccccccccccccceeccCCCCcccCh-hhhccc-cccccccCCCcccCCchH
Confidence 9999998889999999999999999999885 666654 699999999999876653
No 15
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.44 E-value=3.6e-13 Score=99.83 Aligned_cols=139 Identities=24% Similarity=0.247 Sum_probs=88.8
Q ss_pred CcceeCCCCCccccchhhhcccCC-cccccCCCCC---C-CCCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEE
Q psy4162 14 KIPLDLSFQQIQSLDKVAVQKLKP-NVHRLGESPP---M-LVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWI 88 (210)
Q Consensus 14 ~~~L~ls~n~l~~l~~~~~~~l~~-~~~~~~~~~~---~-~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L 88 (210)
...|+++.|.++.+.... .+++ ..+.+....+ . .+.+++|+.|++++|+++.++. +..+++|+.|
T Consensus 48 L~~L~l~~~~i~~l~~l~--~l~~L~~L~L~~n~i~~l~~~~~l~~L~~L~l~~n~i~~l~~--------l~~l~~L~~L 117 (210)
T d1h6ta2 48 IDQIIANNSDIKSVQGIQ--YLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSS--------LKDLKKLKSL 117 (210)
T ss_dssp CCEEECTTSCCCCCTTGG--GCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCGGG--------GTTCTTCCEE
T ss_pred ccEEECcCCCCCCchhHh--hCCCCCEEeCCCccccCccccccCcccccccccccccccccc--------cccccccccc
Confidence 345888888888877643 3344 1111111111 1 2556667777777777776542 4555677777
Q ss_pred ECcCCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccchHHHHHHhCcCcccccCCC
Q psy4162 89 DLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVF 168 (210)
Q Consensus 89 ~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~ 168 (210)
++++|.+..++. +..++.++.+++++|.++.... +..+++|+.+++++|.+.++++ +..+++|+.|++++
T Consensus 118 ~l~~~~~~~~~~--l~~l~~l~~l~~~~n~l~~~~~---~~~l~~L~~l~l~~n~l~~i~~-----l~~l~~L~~L~Ls~ 187 (210)
T d1h6ta2 118 SLEHNGISDING--LVHLPQLESLYLGNNKITDITV---LSRLTKLDTLSLEDNQISDIVP-----LAGLTKLQNLYLSK 187 (210)
T ss_dssp ECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG---GGGCTTCSEEECCSSCCCCCGG-----GTTCTTCCEEECCS
T ss_pred cccccccccccc--cccccccccccccccccccccc---cccccccccccccccccccccc-----ccCCCCCCEEECCC
Confidence 777776665543 5566667777777776665442 4567778888888888877654 66778888888887
Q ss_pred CCHH
Q psy4162 169 ILPS 172 (210)
Q Consensus 169 ~~~~ 172 (210)
|.+.
T Consensus 188 N~i~ 191 (210)
T d1h6ta2 188 NHIS 191 (210)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 7654
No 16
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=2.2e-13 Score=96.48 Aligned_cols=107 Identities=10% Similarity=0.004 Sum_probs=92.8
Q ss_pred CccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCC-CCCcCCcccccCCCCccEEEccCCccCccccccccccCC
Q psy4162 54 DTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFN-NIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVN 132 (210)
Q Consensus 54 ~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n-~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~ 132 (210)
..+.++.+++.+...+ ..+..+++|++|++++| .++.+++..|..+++|+.|++++|+++.+++ ..|.+++
T Consensus 9 ~~~~l~c~~~~~~~~p-------~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~-~~f~~l~ 80 (156)
T d2ifga3 9 GSSGLRCTRDGALDSL-------HHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP-DAFHFTP 80 (156)
T ss_dssp SSSCEECCSSCCCTTT-------TTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT-TGGGSCS
T ss_pred CCCeEEecCCCCccCc-------ccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccc-ccccccc
Confidence 3567888888888876 56778899999999876 5999999889999999999999999999986 8899999
Q ss_pred CcCEEeeeCCCCCCccchHHHHHHhCcCcccccCCCCCHH
Q psy4162 133 SLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPS 172 (210)
Q Consensus 133 ~L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 172 (210)
+|+.|+|++|.++.++. ..+. ...|+.|++++|+..
T Consensus 81 ~L~~L~Ls~N~l~~l~~---~~~~-~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 81 RLSRLNLSFNALESLSW---KTVQ-GLSLQELVLSGNPLH 116 (156)
T ss_dssp CCCEEECCSSCCSCCCS---TTTC-SCCCCEEECCSSCCC
T ss_pred cccceeccCCCCcccCh---hhhc-cccccccccCCCccc
Confidence 99999999999999987 3444 446999999999863
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.41 E-value=1e-12 Score=96.54 Aligned_cols=139 Identities=19% Similarity=0.180 Sum_probs=101.3
Q ss_pred eeCCCCCccccchh-hhcccCCcc-cccCCCCCC-CCCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCC
Q psy4162 17 LDLSFQQIQSLDKV-AVQKLKPNV-HRLGESPPM-LVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFN 93 (210)
Q Consensus 17 L~ls~n~l~~l~~~-~~~~l~~~~-~~~~~~~~~-~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n 93 (210)
..++.+.++..... .+.++.... ...++..+. ...+++|+.|++++|+++.+++ +..+++|+.|++++|
T Consensus 23 ~~l~~~~~~~~~~~~~l~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~~--------l~~l~~L~~L~l~~n 94 (199)
T d2omxa2 23 TVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--------LKNLTKLVDILMNNN 94 (199)
T ss_dssp HHTTCSSTTSEECHHHHTTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--------GTTCTTCCEEECCSS
T ss_pred HHhCCCCCCCccCHHHhcCCCEEECCCCCCCCccccccCCCcCcCccccccccCccc--------ccCCccccccccccc
Confidence 45666776665433 222222100 111222222 2668899999999999888753 677789999999999
Q ss_pred CCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccchHHHHHHhCcCcccccCCCCCHHH
Q psy4162 94 NIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSE 173 (210)
Q Consensus 94 ~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~~~~~ 173 (210)
.+..+++ +..++.|+.+++++|.+..... +.++++|+.+++++|.+..++. +..+++|+.|++.+|.+.+
T Consensus 95 ~~~~~~~--l~~l~~L~~L~l~~~~~~~~~~---~~~l~~L~~L~l~~n~l~~~~~-----l~~~~~L~~L~l~~n~l~~ 164 (199)
T d2omxa2 95 QIADITP--LANLTNLTGLTLFNNQITDIDP---LKNLTNLNRLELSSNTISDISA-----LSGLTSLQQLNFSSNQVTD 164 (199)
T ss_dssp CCCCCGG--GTTCTTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCCCCGG-----GTTCTTCSEEECCSSCCCC
T ss_pred ccccccc--cccccccccccccccccccccc---cchhhhhHHhhhhhhhhccccc-----ccccccccccccccccccC
Confidence 9888775 7888999999999998877653 6788999999999999988765 7788999999999987654
No 18
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.37 E-value=1.1e-12 Score=104.83 Aligned_cols=144 Identities=22% Similarity=0.262 Sum_probs=81.3
Q ss_pred CcceeCCCCCccccchhhhcccCC-cccccCC---CCCC-CCCCCCccEEEccCCccccccCCchhh-------------
Q psy4162 14 KIPLDLSFQQIQSLDKVAVQKLKP-NVHRLGE---SPPM-LVGRYDTRSLWLSHNKISLVYGLDSLV------------- 75 (210)
Q Consensus 14 ~~~L~ls~n~l~~l~~~~~~~l~~-~~~~~~~---~~~~-~~~l~~L~~L~ls~n~l~~~~~l~~~~------------- 75 (210)
...+++++|.++.++... .+++ ..+.+.- .... ...+++|+.|++++++++.++++..+.
T Consensus 221 L~~L~l~~n~l~~~~~l~--~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~ 298 (384)
T d2omza2 221 LDELSLNGNQLKDIGTLA--SLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLE 298 (384)
T ss_dssp CCEEECCSSCCCCCGGGG--GCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCS
T ss_pred CCEEECCCCCCCCcchhh--cccccchhccccCccCCCCcccccccCCEeeccCcccCCCCccccccccccccccccccc
Confidence 456899999998876543 2233 1122221 2222 377888999999999888765421111
Q ss_pred -hhccCCCCCCCEEECcCCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccchHHHH
Q psy4162 76 -HRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVV 154 (210)
Q Consensus 76 -~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 154 (210)
...+..++.++.|++++|+++.+.+ +..+++|+.|++++|.++.++ .+.++++|+.|++++|+++++++
T Consensus 299 ~~~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~~l~---~l~~l~~L~~L~l~~N~l~~l~~----- 368 (384)
T d2omza2 299 DISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDVS---SLANLTNINWLSAGHNQISDLTP----- 368 (384)
T ss_dssp CCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCCG---GGGGCTTCCEEECCSSCCCBCGG-----
T ss_pred cccccchhcccCeEECCCCCCCCCcc--cccCCCCCEEECCCCCCCCCh---hHcCCCCCCEEECCCCcCCCChh-----
Confidence 0123444555666666666655543 455566666666666655543 24555666666666666665543
Q ss_pred HHhCcCcccccCCCC
Q psy4162 155 STMIPQLVTLDSVFI 169 (210)
Q Consensus 155 l~~l~~L~~L~l~~~ 169 (210)
+..+++|+.|+++.|
T Consensus 369 l~~l~~L~~L~L~~N 383 (384)
T d2omza2 369 LANLTRITQLGLNDQ 383 (384)
T ss_dssp GTTCTTCSEEECCCE
T ss_pred hccCCCCCEeeCCCC
Confidence 455566666665544
No 19
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.37 E-value=2.2e-12 Score=95.51 Aligned_cols=106 Identities=25% Similarity=0.293 Sum_probs=89.4
Q ss_pred CCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCCCCcCCcccccCCCCccEEEccCCccCccccccccc
Q psy4162 50 VGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLR 129 (210)
Q Consensus 50 ~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~ 129 (210)
..+++|+.|++++|+++.+++ +..+++|+.|++++|+++.++. +..+++|+.|++++|.+..++. +.
T Consensus 65 ~~l~~L~~L~L~~n~i~~l~~--------~~~l~~L~~L~l~~n~i~~l~~--l~~l~~L~~L~l~~~~~~~~~~---l~ 131 (210)
T d1h6ta2 65 QYLPNVTKLFLNGNKLTDIKP--------LANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSLEHNGISDING---LV 131 (210)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--------GTTCTTCCEEECCSSCCCCGGG--GTTCTTCCEEECTTSCCCCCGG---GG
T ss_pred hhCCCCCEEeCCCccccCccc--------cccCcccccccccccccccccc--cccccccccccccccccccccc---cc
Confidence 668889999999999988753 4677899999999999988764 7888999999999998877653 67
Q ss_pred cCCCcCEEeeeCCCCCCccchHHHHHHhCcCcccccCCCCCHHH
Q psy4162 130 RVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSE 173 (210)
Q Consensus 130 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~~~~~ 173 (210)
+++.++.+++++|.+.+.+. +..+++|+.+++++|.+.+
T Consensus 132 ~l~~l~~l~~~~n~l~~~~~-----~~~l~~L~~l~l~~n~l~~ 170 (210)
T d1h6ta2 132 HLPQLESLYLGNNKITDITV-----LSRLTKLDTLSLEDNQISD 170 (210)
T ss_dssp GCTTCCEEECCSSCCCCCGG-----GGGCTTCSEEECCSSCCCC
T ss_pred cccccccccccccccccccc-----ccccccccccccccccccc
Confidence 88899999999999987764 6788999999999998754
No 20
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.36 E-value=1.5e-12 Score=97.40 Aligned_cols=62 Identities=23% Similarity=0.299 Sum_probs=42.5
Q ss_pred ccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccchHHHHHHhCcCcccccCCCCCHH
Q psy4162 103 FTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPS 172 (210)
Q Consensus 103 ~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 172 (210)
+..+++|+.|++++|.+....+ +.++++|+.|++++|.+.++++ ++.+++|+.|++++|.+.
T Consensus 147 ~~~~~~L~~L~l~~n~~~~~~~---l~~l~~L~~L~Ls~n~l~~l~~-----l~~l~~L~~L~Ls~N~lt 208 (227)
T d1h6ua2 147 LAGLTNLQYLSIGNAQVSDLTP---LANLSKLTTLKADDNKISDISP-----LASLPNLIEVHLKNNQIS 208 (227)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCCGG-----GGGCTTCCEEECTTSCCC
T ss_pred hccccccccccccccccccchh---hcccccceecccCCCccCCChh-----hcCCCCCCEEECcCCcCC
Confidence 4456667777777777765543 5667777777777777777654 567777777777777654
No 21
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.32 E-value=2.7e-12 Score=99.95 Aligned_cols=116 Identities=22% Similarity=0.148 Sum_probs=97.6
Q ss_pred CCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCCCCcCCcccccCCCCccEEEccCCccCccccccccc
Q psy4162 50 VGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLR 129 (210)
Q Consensus 50 ~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~ 129 (210)
..+++|+.|++++|.+....+ ..|..++.++.|++++|.+.++++..+..+++|+.|++++|.++.++ ..+.
T Consensus 168 ~~~~~L~~L~l~~n~~~~~~~------~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp--~~l~ 239 (305)
T d1xkua_ 168 GLPPSLTELHLDGNKITKVDA------ASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVP--GGLA 239 (305)
T ss_dssp SCCTTCSEEECTTSCCCEECT------GGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCC--TTTT
T ss_pred ccCCccCEEECCCCcCCCCCh------hHhhccccccccccccccccccccccccccccceeeecccccccccc--cccc
Confidence 445679999999999998876 88899999999999999999998888899999999999999999886 5688
Q ss_pred cCCCcCEEeeeCCCCCCccchHH---HHHHhCcCcccccCCCCCHHH
Q psy4162 130 RVNSLRTLSLYGNPIEKIREYRA---VVSTMIPQLVTLDSVFILPSE 173 (210)
Q Consensus 130 ~l~~L~~L~l~~n~l~~~~~~~~---~~l~~l~~L~~L~l~~~~~~~ 173 (210)
.+++|+.|++++|+|+.++...+ .....+++|+.|++.+|+...
T Consensus 240 ~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~ 286 (305)
T d1xkua_ 240 DHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 286 (305)
T ss_dssp TCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred cccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCcc
Confidence 89999999999999998754100 123456789999999998543
No 22
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.31 E-value=8.7e-12 Score=93.11 Aligned_cols=79 Identities=14% Similarity=0.248 Sum_probs=44.5
Q ss_pred cCCCCCCCEEECcCCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCccchHHHHHHhC
Q psy4162 79 ILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMI 158 (210)
Q Consensus 79 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l 158 (210)
+..+++|+.|++++|.+....+ ++.+++|+.|++++|+++++++ +.++++|+.|++++|+++++++ +..+
T Consensus 147 ~~~~~~L~~L~l~~n~~~~~~~--l~~l~~L~~L~Ls~n~l~~l~~---l~~l~~L~~L~Ls~N~lt~i~~-----l~~l 216 (227)
T d1h6ua2 147 LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP---LASLPNLIEVHLKNNQISDVSP-----LANT 216 (227)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG---GGGCTTCCEEECTTSCCCBCGG-----GTTC
T ss_pred hccccccccccccccccccchh--hcccccceecccCCCccCCChh---hcCCCCCCEEECcCCcCCCCcc-----cccC
Confidence 3444555566665555554433 4556666666666666655442 4555666666666666665544 4556
Q ss_pred cCcccccCC
Q psy4162 159 PQLVTLDSV 167 (210)
Q Consensus 159 ~~L~~L~l~ 167 (210)
++|+.|+++
T Consensus 217 ~~L~~L~ls 225 (227)
T d1h6ua2 217 SNLFIVTLT 225 (227)
T ss_dssp TTCCEEEEE
T ss_pred CCCCEEEee
Confidence 666665553
No 23
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.26 E-value=9.4e-14 Score=102.22 Aligned_cols=107 Identities=21% Similarity=0.167 Sum_probs=90.0
Q ss_pred CccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCC
Q psy4162 54 DTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNS 133 (210)
Q Consensus 54 ~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~ 133 (210)
+|+.|++++|.|+.+++ +..+++|+.|++++|.++.++.. +..+++|+.|++++|.++.+++ +..+++
T Consensus 49 ~L~~L~Ls~n~I~~i~~--------l~~l~~L~~L~Ls~N~i~~i~~~-~~~~~~L~~L~l~~N~i~~l~~---~~~l~~ 116 (198)
T d1m9la_ 49 ACKHLALSTNNIEKISS--------LSGMENLRILSLGRNLIKKIENL-DAVADTLEELWISYNQIASLSG---IEKLVN 116 (198)
T ss_dssp TCCEEECSEEEESCCCC--------HHHHTTCCEEECCEEEECSCSSH-HHHHHHCCEEECSEEECCCHHH---HHHHHH
T ss_pred ccceeECcccCCCCccc--------ccCCccccChhhccccccccccc-cccccccccccccccccccccc---cccccc
Confidence 39999999999999865 44558999999999999988753 4445689999999999998753 678899
Q ss_pred cCEEeeeCCCCCCccchHHHHHHhCcCcccccCCCCCHHHH
Q psy4162 134 LRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEK 174 (210)
Q Consensus 134 L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~ 174 (210)
|+.|++++|.++.++.. ..+..+++|+.|++++|++.+.
T Consensus 117 L~~L~L~~N~i~~~~~~--~~l~~l~~L~~L~L~~N~l~~~ 155 (198)
T d1m9la_ 117 LRVLYMSNNKITNWGEI--DKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp SSEEEESEEECCCHHHH--HHHTTTTTCSEEEECSSHHHHH
T ss_pred ccccccccchhcccccc--ccccCCCccceeecCCCccccC
Confidence 99999999999988652 3588999999999999987554
No 24
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.21 E-value=4.5e-11 Score=95.20 Aligned_cols=141 Identities=18% Similarity=0.175 Sum_probs=100.5
Q ss_pred CcceeCCCCCccccchhhhcccCCcccccCCC-----CCC-CCCCCCccEEEccCCccccccCCchhhhhccCCCCCCCE
Q psy4162 14 KIPLDLSFQQIQSLDKVAVQKLKPNVHRLGES-----PPM-LVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGW 87 (210)
Q Consensus 14 ~~~L~ls~n~l~~l~~~~~~~l~~~~~~~~~~-----~~~-~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~ 87 (210)
...++++.|.++.+.+.... ++ ...+.+. ... ...+.+|+.+++++|.++.+++ +..+++|+.
T Consensus 199 ~~~l~l~~n~i~~~~~~~~~--~~-L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--------~~~~~~L~~ 267 (384)
T d2omza2 199 LESLIATNNQISDITPLGIL--TN-LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--------LSGLTKLTE 267 (384)
T ss_dssp CSEEECCSSCCCCCGGGGGC--TT-CCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--------GTTCTTCSE
T ss_pred cceeeccCCccCCCCccccc--CC-CCEEECCCCCCCCcchhhcccccchhccccCccCCCCc--------ccccccCCE
Confidence 45589999999988765432 22 1112222 122 2778899999999999988754 455677777
Q ss_pred EECcCCCCCcCCc--------------------ccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCc
Q psy4162 88 IDLSFNNIKNVDK--------------------NMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKI 147 (210)
Q Consensus 88 L~Ls~n~i~~~~~--------------------~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 147 (210)
+++++++++.+.+ ..+..+++++.|++++|.++++++ +..+++|+.|++++|+++++
T Consensus 268 L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l~~---l~~l~~L~~L~L~~n~l~~l 344 (384)
T d2omza2 268 LKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP---VSSLTKLQRLFFANNKVSDV 344 (384)
T ss_dssp EECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG---GGGCTTCCEEECCSSCCCCC
T ss_pred eeccCcccCCCCccccccccccccccccccccccccchhcccCeEECCCCCCCCCcc---cccCCCCCEEECCCCCCCCC
Confidence 7777777665432 124556777888888888877653 67788999999999998887
Q ss_pred cchHHHHHHhCcCcccccCCCCCHHH
Q psy4162 148 REYRAVVSTMIPQLVTLDSVFILPSE 173 (210)
Q Consensus 148 ~~~~~~~l~~l~~L~~L~l~~~~~~~ 173 (210)
+. +..+++|+.|++++|.+.+
T Consensus 345 ~~-----l~~l~~L~~L~l~~N~l~~ 365 (384)
T d2omza2 345 SS-----LANLTNINWLSAGHNQISD 365 (384)
T ss_dssp GG-----GGGCTTCCEEECCSSCCCB
T ss_pred hh-----HcCCCCCCEEECCCCcCCC
Confidence 64 7788999999999887643
No 25
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.11 E-value=3.9e-11 Score=93.63 Aligned_cols=129 Identities=15% Similarity=0.146 Sum_probs=94.1
Q ss_pred cceeCCCCCccccc--hhhhcccCCcccccCCCCCCCCCCCCccEEEccC-CccccccCCchhhhhccCCCCCCCEEECc
Q psy4162 15 IPLDLSFQQIQSLD--KVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSH-NKISLVYGLDSLVHRTILDPDLIGWIDLS 91 (210)
Q Consensus 15 ~~L~ls~n~l~~l~--~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~ls~-n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls 91 (210)
+.|++++++++... +..+.++++ |+.|++++ |.+.+..+ ..+..+++|+.|+++
T Consensus 53 ~~L~L~~~~l~g~~~lp~~l~~L~~-----------------L~~L~Ls~~N~l~g~iP------~~i~~L~~L~~L~Ls 109 (313)
T d1ogqa_ 53 NNLDLSGLNLPKPYPIPSSLANLPY-----------------LNFLYIGGINNLVGPIP------PAIAKLTQLHYLYIT 109 (313)
T ss_dssp EEEEEECCCCSSCEECCGGGGGCTT-----------------CSEEEEEEETTEESCCC------GGGGGCTTCSEEEEE
T ss_pred EEEECCCCCCCCCCCCChHHhcCcc-----------------ccccccccccccccccc------cccccccccchhhhc
Confidence 34777777776421 123444555 99999986 77774333 678888899999999
Q ss_pred CCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCC-ccchHHHHHHhCcCc-ccccCCCC
Q psy4162 92 FNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEK-IREYRAVVSTMIPQL-VTLDSVFI 169 (210)
Q Consensus 92 ~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~l~~L-~~L~l~~~ 169 (210)
+|++.++.+..+..+..|+.+++++|.+....+ ..+..++.++.+++++|.+.+ +|. .+..+..+ +.++++.|
T Consensus 110 ~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p-~~l~~l~~L~~l~l~~n~l~~~ip~----~~~~l~~l~~~l~~~~n 184 (313)
T d1ogqa_ 110 HTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLP-PSISSLPNLVGITFDGNRISGAIPD----SYGSFSKLFTSMTISRN 184 (313)
T ss_dssp EECCEEECCGGGGGCTTCCEEECCSSEEESCCC-GGGGGCTTCCEEECCSSCCEEECCG----GGGCCCTTCCEEECCSS
T ss_pred cccccccccccccchhhhcccccccccccccCc-hhhccCcccceeecccccccccccc----ccccccccccccccccc
Confidence 999888887778888889999999888776654 678888889999999988874 444 46666665 66777766
Q ss_pred CH
Q psy4162 170 LP 171 (210)
Q Consensus 170 ~~ 171 (210)
..
T Consensus 185 ~l 186 (313)
T d1ogqa_ 185 RL 186 (313)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 26
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=5.5e-11 Score=89.27 Aligned_cols=112 Identities=18% Similarity=0.219 Sum_probs=66.6
Q ss_pred CCcceeCCCCCccccchhhhcccCCcccccCCCCCCCCCCCCccEEEccCCccccc-cCCchhhhhccCCCCCCCEEECc
Q psy4162 13 FKIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLV-YGLDSLVHRTILDPDLIGWIDLS 91 (210)
Q Consensus 13 ~~~~L~ls~n~l~~l~~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~ls~n~l~~~-~~l~~~~~~~~~~l~~L~~L~Ls 91 (210)
..+.|++++|.|+.++...|.++++ |+.|++++|.+... +. ..|..++.++++.+.
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~-----------------L~~L~ls~n~~~~~i~~------~~f~~l~~l~~l~~~ 86 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGD-----------------LEKIEISQNDVLEVIEA------DVFSNLPKLHEIRIE 86 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTT-----------------CCEEEEESCTTCCEECS------SSEESCTTCCEEEEE
T ss_pred CCCEEECcCCcCCccChhHhhccch-----------------hhhhhhccccccceeec------ccccccccccccccc
Confidence 4566888888888777777766666 77777777776553 33 456666666666654
Q ss_pred C-CCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCc
Q psy4162 92 F-NNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKI 147 (210)
Q Consensus 92 ~-n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 147 (210)
. |.+...++..|..+++|+.+++++|.+...+....+..+..+..+...++.+..+
T Consensus 87 ~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i 143 (242)
T d1xwdc1 87 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTI 143 (242)
T ss_dssp CCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhcccccccccccccccccccccccccccc
Confidence 3 4566666655666667777777666666554322233333333333344444433
No 27
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.10 E-value=8e-11 Score=91.78 Aligned_cols=143 Identities=14% Similarity=-0.021 Sum_probs=96.4
Q ss_pred CcceeCCCCCccccchhhhcccCCcccccCCCCCC--------CCCCCCccEEEccCCccccccCCchhhhhccCCCCCC
Q psy4162 14 KIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPM--------LVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLI 85 (210)
Q Consensus 14 ~~~L~ls~n~l~~l~~~~~~~l~~~~~~~~~~~~~--------~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L 85 (210)
...+++++|.++..-+..+..+......+...... ...+ ....++++++......+ ..+..++.+
T Consensus 151 L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l-~~~~l~l~~~~~~~~~~------~~~~~~~~l 223 (313)
T d1ogqa_ 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDAS------VLFGSDKNT 223 (313)
T ss_dssp CCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC-CCSEEECCSSEEEECCG------GGCCTTSCC
T ss_pred cceeecccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccc------ccccccccc
Confidence 35688999988754444333333311111111110 0222 23356666666665544 667778889
Q ss_pred CEEECcCCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCC-ccchHHHHHHhCcCcccc
Q psy4162 86 GWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEK-IREYRAVVSTMIPQLVTL 164 (210)
Q Consensus 86 ~~L~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~l~~L~~L 164 (210)
+.+++++|.+....+. +..+++|+.|++++|++++..+ ..++++++|+.|+|++|.+++ +|. +..+++|+.+
T Consensus 224 ~~l~~~~~~l~~~~~~-~~~~~~L~~L~Ls~N~l~g~iP-~~l~~L~~L~~L~Ls~N~l~g~iP~-----~~~L~~L~~l 296 (313)
T d1ogqa_ 224 QKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLP-QGLTQLKFLHSLNVSFNNLCGEIPQ-----GGNLQRFDVS 296 (313)
T ss_dssp SEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCC-GGGGGCTTCCEEECCSSEEEEECCC-----STTGGGSCGG
T ss_pred cccccccccccccccc-cccccccccccCccCeecccCC-hHHhCCCCCCEEECcCCcccccCCC-----cccCCCCCHH
Confidence 9999999988776654 7778899999999999985443 668889999999999999884 554 5677888888
Q ss_pred cCCCCC
Q psy4162 165 DSVFIL 170 (210)
Q Consensus 165 ~l~~~~ 170 (210)
++.+|+
T Consensus 297 ~l~~N~ 302 (313)
T d1ogqa_ 297 AYANNK 302 (313)
T ss_dssp GTCSSS
T ss_pred HhCCCc
Confidence 888886
No 28
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=3.2e-10 Score=84.93 Aligned_cols=108 Identities=13% Similarity=0.199 Sum_probs=89.5
Q ss_pred cceeCCCCCccccchhhhcccCCcccccCCCCCCCCCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCC
Q psy4162 15 IPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNN 94 (210)
Q Consensus 15 ~~L~ls~n~l~~l~~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~ 94 (210)
..++.+.++++.+|...+ .+ ++.|++++|+|+.++. ..|.++++|++|++++|.
T Consensus 11 ~~i~c~~~~l~~iP~~l~---~~-----------------l~~L~Ls~n~i~~l~~------~~f~~l~~L~~L~ls~n~ 64 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP---RN-----------------AIELRFVLTKLRVIQK------GAFSGFGDLEKIEISQND 64 (242)
T ss_dssp SEEEEESCSCSSCCSCSC---SC-----------------CSEEEEESCCCCEECT------TTTTTCTTCCEEEEESCT
T ss_pred CEEEEeCCCCCCcCCCCC---CC-----------------CCEEECcCCcCCccCh------hHhhccchhhhhhhcccc
Confidence 457788888888876432 35 9999999999999987 789999999999999998
Q ss_pred CCc-CCcccccCCCCccEEEccC-CccCccccccccccCCCcCEEeeeCCCCCCccc
Q psy4162 95 IKN-VDKNMFTNFPNLKILYLHK-NQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIRE 149 (210)
Q Consensus 95 i~~-~~~~~~~~~~~L~~L~l~~-n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 149 (210)
+.. +++..|..++.+..+.+.. |.+...++ ..+.++++|+.+++++|.+...+.
T Consensus 65 ~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~-~~~~~l~~L~~l~l~~~~l~~~~~ 120 (242)
T d1xwdc1 65 VLEVIEADVFSNLPKLHEIRIEKANNLLYINP-EAFQNLPNLQYLLISNTGIKHLPD 120 (242)
T ss_dssp TCCEECSSSEESCTTCCEEEEECCTTCCEECT-TSEECCTTCCEEEEESCCCCSCCC
T ss_pred ccceeecccccccccccccccccccccccccc-ccccccccccccccchhhhccccc
Confidence 765 5666788899999988764 67777775 778999999999999999886654
No 29
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.91 E-value=2.7e-11 Score=85.93 Aligned_cols=93 Identities=24% Similarity=0.286 Sum_probs=75.5
Q ss_pred hccCCCCCCCEEECcCCCCCcCCc--ccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCc----cch
Q psy4162 77 RTILDPDLIGWIDLSFNNIKNVDK--NMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKI----REY 150 (210)
Q Consensus 77 ~~~~~l~~L~~L~Ls~n~i~~~~~--~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~ 150 (210)
..+..+++|+.|++++|+|+.+.+ ..+..+++|+.|++++|.|+.++++..+. ...|+.+++++|++... ..|
T Consensus 59 ~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~-~~~L~~L~L~~Npl~~~~~~~~~y 137 (162)
T d1koha1 59 IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIK-GLKLEELWLDGNSLSDTFRDQSTY 137 (162)
T ss_dssp HHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHT-TCCCSSCCCTTSTTSSSSSSHHHH
T ss_pred HHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhh-ccccceeecCCCCcCcCcccchhH
Confidence 344567899999999999998864 33567899999999999999998644444 45799999999999853 457
Q ss_pred HHHHHHhCcCcccccCCCCC
Q psy4162 151 RAVVSTMIPQLVTLDSVFIL 170 (210)
Q Consensus 151 ~~~~l~~l~~L~~L~l~~~~ 170 (210)
|..++..+|+|+.||....+
T Consensus 138 ~~~i~~~~P~L~~LDg~~v~ 157 (162)
T d1koha1 138 ISAIRERFPKLLRLDGHELP 157 (162)
T ss_dssp HHHHHTTSTTCCEETTEECC
T ss_pred HHHHHHHCCCCCEECcCCCc
Confidence 88889999999999987653
No 30
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.87 E-value=5.2e-09 Score=81.74 Aligned_cols=97 Identities=23% Similarity=0.278 Sum_probs=74.5
Q ss_pred CcceeCCCCCccccchhhhcccCCcccccCCCCCCCCCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCC
Q psy4162 14 KIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFN 93 (210)
Q Consensus 14 ~~~L~ls~n~l~~l~~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n 93 (210)
..+||+++++++.+|.. .++ |+.|++++|+|+.+|. . +.+|+.|++++|
T Consensus 40 l~~LdLs~~~L~~lp~~----~~~-----------------L~~L~Ls~N~l~~lp~-------~---~~~L~~L~l~~n 88 (353)
T d1jl5a_ 40 AHELELNNLGLSSLPEL----PPH-----------------LESLVASCNSLTELPE-------L---PQSLKSLLVDNN 88 (353)
T ss_dssp CSEEECTTSCCSCCCSC----CTT-----------------CSEEECCSSCCSSCCC-------C---CTTCCEEECCSS
T ss_pred CCEEEeCCCCCCCCCCC----CCC-----------------CCEEECCCCCCccccc-------c---hhhhhhhhhhhc
Confidence 35699999999998853 255 8999999999988874 1 357888889888
Q ss_pred CCCcCCcccccCCCCccEEEccCCccCccccccccccCCCcCEEeeeCCCCCCcc
Q psy4162 94 NIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIR 148 (210)
Q Consensus 94 ~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 148 (210)
+++.++. + .+.|+.|++++|.+..++. ++.++.|+.+++++|.+...+
T Consensus 89 ~l~~l~~--l--p~~L~~L~L~~n~l~~lp~---~~~l~~L~~L~l~~~~~~~~~ 136 (353)
T d1jl5a_ 89 NLKALSD--L--PPLLEYLGVSNNQLEKLPE---LQNSSFLKIIDVDNNSLKKLP 136 (353)
T ss_dssp CCSCCCS--C--CTTCCEEECCSSCCSSCCC---CTTCTTCCEEECCSSCCSCCC
T ss_pred ccchhhh--h--ccccccccccccccccccc---hhhhccceeeccccccccccc
Confidence 8887754 2 2468889999998888764 456788888888888776543
No 31
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.80 E-value=1e-08 Score=79.96 Aligned_cols=95 Identities=19% Similarity=0.136 Sum_probs=79.7
Q ss_pred CccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCCCCcCCcccccCCCCccEEEccCCccCccccccccccCCC
Q psy4162 54 DTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNS 133 (210)
Q Consensus 54 ~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~l~~ 133 (210)
+++.|+++++.++.+|. .+++|+.|++++|+|+.++.. ..+|+.|++++|+++.++.+ .+.
T Consensus 39 ~l~~LdLs~~~L~~lp~----------~~~~L~~L~Ls~N~l~~lp~~----~~~L~~L~l~~n~l~~l~~l-----p~~ 99 (353)
T d1jl5a_ 39 QAHELELNNLGLSSLPE----------LPPHLESLVASCNSLTELPEL----PQSLKSLLVDNNNLKALSDL-----PPL 99 (353)
T ss_dssp TCSEEECTTSCCSCCCS----------CCTTCSEEECCSSCCSSCCCC----CTTCCEEECCSSCCSCCCSC-----CTT
T ss_pred CCCEEEeCCCCCCCCCC----------CCCCCCEEECCCCCCcccccc----hhhhhhhhhhhcccchhhhh-----ccc
Confidence 38999999999999874 137899999999999998753 56899999999999887631 256
Q ss_pred cCEEeeeCCCCCCccchHHHHHHhCcCcccccCCCCCHH
Q psy4162 134 LRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPS 172 (210)
Q Consensus 134 L~~L~l~~n~l~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 172 (210)
|+.|++++|.+..++. ++.++.|+.|++.++...
T Consensus 100 L~~L~L~~n~l~~lp~-----~~~l~~L~~L~l~~~~~~ 133 (353)
T d1jl5a_ 100 LEYLGVSNNQLEKLPE-----LQNSSFLKIIDVDNNSLK 133 (353)
T ss_dssp CCEEECCSSCCSSCCC-----CTTCTTCCEEECCSSCCS
T ss_pred cccccccccccccccc-----hhhhccceeecccccccc
Confidence 9999999999999987 567899999999887653
No 32
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.47 E-value=1.1e-08 Score=72.19 Aligned_cols=85 Identities=19% Similarity=0.151 Sum_probs=66.4
Q ss_pred CCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCCCCcCCcccccCCCCccEEEccCCccCccccc----
Q psy4162 50 VGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSV---- 125 (210)
Q Consensus 50 ~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~---- 125 (210)
..+++|+.|++++|+|+.+.++. ..+..+++|+.|++++|.|+.+.+-.+.....|+.+++.+|.+......
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~----~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y 137 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMS----SIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTY 137 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGG----THHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhH----HHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhH
Confidence 45778999999999999986533 4456679999999999999998774444556799999999999765320
Q ss_pred --cccccCCCcCEEe
Q psy4162 126 --FVLRRVNSLRTLS 138 (210)
Q Consensus 126 --~~~~~l~~L~~L~ 138 (210)
..+..+|+|+.||
T Consensus 138 ~~~i~~~~P~L~~LD 152 (162)
T d1koha1 138 ISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHTTSTTCCEET
T ss_pred HHHHHHHCCCCCEEC
Confidence 2256789999886
No 33
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.45 E-value=2e-07 Score=71.36 Aligned_cols=89 Identities=17% Similarity=0.098 Sum_probs=57.0
Q ss_pred CCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCCCCcCCcccccCCCCccEEEccCC-ccCcccccccc
Q psy4162 50 VGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKN-QIEEYLSVFVL 128 (210)
Q Consensus 50 ~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~L~l~~n-~i~~~~~~~~~ 128 (210)
.....|+.|+++++.++.-.- ...+..+++|+.|+++++.++......+..+++|+.|+++++ .+++..-....
T Consensus 43 ~~~~~L~~LdLs~~~i~~~~l-----~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~ 117 (284)
T d2astb2 43 FSPFRVQHMDLSNSVIEVSTL-----HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLL 117 (284)
T ss_dssp CCCBCCCEEECTTCEECHHHH-----HHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHH
T ss_pred ccCCCCCEEECCCCccCHHHH-----HHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhh
Confidence 445568888888887764210 144666778888888888776544444666778888888774 45543210223
Q ss_pred ccCCCcCEEeeeCCC
Q psy4162 129 RRVNSLRTLSLYGNP 143 (210)
Q Consensus 129 ~~l~~L~~L~l~~n~ 143 (210)
.++++|+.|+++++.
T Consensus 118 ~~~~~L~~L~ls~c~ 132 (284)
T d2astb2 118 SSCSRLDELNLSWCF 132 (284)
T ss_dssp HHCTTCCEEECCCCT
T ss_pred HHHHhcccccccccc
Confidence 457778888887753
No 34
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.31 E-value=2.3e-07 Score=72.64 Aligned_cols=121 Identities=20% Similarity=0.127 Sum_probs=77.5
Q ss_pred CCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCCCCcCC----cccccCCCCccEEEccCCccCcccccc
Q psy4162 51 GRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVD----KNMFTNFPNLKILYLHKNQIEEYLSVF 126 (210)
Q Consensus 51 ~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~----~~~~~~~~~L~~L~l~~n~i~~~~~~~ 126 (210)
....|+.|++++|.++.-. ........+..+++|+.|++++|.++... ...+..+++|+.|++++|.+..... .
T Consensus 184 ~~~~L~~L~L~~n~i~~~g-~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~-~ 261 (344)
T d2ca6a1 184 SHRLLHTVKMVQNGIRPEG-IEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGA-A 261 (344)
T ss_dssp HCTTCCEEECCSSCCCHHH-HHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHH-H
T ss_pred hhhhhcccccccccccccc-cccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhh-H
Confidence 3566888888888876521 11111144566788888999888875532 1235667888889999888876432 2
Q ss_pred c----cc--cCCCcCEEeeeCCCCCCccchH-HHHH-HhCcCcccccCCCCCHHH
Q psy4162 127 V----LR--RVNSLRTLSLYGNPIEKIREYR-AVVS-TMIPQLVTLDSVFILPSE 173 (210)
Q Consensus 127 ~----~~--~l~~L~~L~l~~n~l~~~~~~~-~~~l-~~l~~L~~L~l~~~~~~~ 173 (210)
. +. ..+.|+.|++++|.+....... ...+ ..+++|+.|++++|.+.+
T Consensus 262 ~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 262 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 2 22 2357888999998877532110 1123 357788888998887644
No 35
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.21 E-value=6.3e-07 Score=68.44 Aligned_cols=148 Identities=15% Similarity=0.039 Sum_probs=77.8
Q ss_pred CcceeCCCCCccccchh-hhcccCCcccccCCCCCC--------CCCCCCccEEEccCC-ccccccCCchhhhhccCCCC
Q psy4162 14 KIPLDLSFQQIQSLDKV-AVQKLKPNVHRLGESPPM--------LVGRYDTRSLWLSHN-KISLVYGLDSLVHRTILDPD 83 (210)
Q Consensus 14 ~~~L~ls~n~l~~l~~~-~~~~l~~~~~~~~~~~~~--------~~~l~~L~~L~ls~n-~l~~~~~l~~~~~~~~~~l~ 83 (210)
...||++++.++.-... .+.+.++ ...+.+.... .+.+++|+.|+++++ .++... +. ..+..++
T Consensus 48 L~~LdLs~~~i~~~~l~~l~~~c~~-L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~-l~----~l~~~~~ 121 (284)
T d2astb2 48 VQHMDLSNSVIEVSTLHGILSQCSK-LQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFA-LQ----TLLSSCS 121 (284)
T ss_dssp CCEEECTTCEECHHHHHHHHTTBCC-CSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHH-HH----HHHHHCT
T ss_pred CCEEECCCCccCHHHHHHHHHhCCC-cccccccccCCCcHHHHHHhcCCCCcCccccccccccccc-cc----hhhHHHH
Confidence 45689998887643222 2333343 2222222221 155667777777663 444311 00 2233456
Q ss_pred CCCEEECcCC-CCCcC--CcccccCCCCccEEEccCC--ccCccccccccccCCCcCEEeeeCCC-CCCccchHHHHHHh
Q psy4162 84 LIGWIDLSFN-NIKNV--DKNMFTNFPNLKILYLHKN--QIEEYLSVFVLRRVNSLRTLSLYGNP-IEKIREYRAVVSTM 157 (210)
Q Consensus 84 ~L~~L~Ls~n-~i~~~--~~~~~~~~~~L~~L~l~~n--~i~~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~ 157 (210)
+|+.|+++++ .++.. .......+++|+.|+++++ .++...-.....++++|+.|++++|. +++... ..+..
T Consensus 122 ~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~---~~l~~ 198 (284)
T d2astb2 122 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCF---QEFFQ 198 (284)
T ss_dssp TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGG---GGGGG
T ss_pred hccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhh---hhhcc
Confidence 7777777765 34321 1111122456777777654 23332210223567888888888765 443322 24677
Q ss_pred CcCcccccCCCCC
Q psy4162 158 IPQLVTLDSVFIL 170 (210)
Q Consensus 158 l~~L~~L~l~~~~ 170 (210)
+++|+.|++++|.
T Consensus 199 ~~~L~~L~L~~C~ 211 (284)
T d2astb2 199 LNYLQHLSLSRCY 211 (284)
T ss_dssp CTTCCEEECTTCT
T ss_pred cCcCCEEECCCCC
Confidence 8888888888764
No 36
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.21 E-value=1.6e-07 Score=75.44 Aligned_cols=115 Identities=14% Similarity=0.057 Sum_probs=78.5
Q ss_pred ccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCCCCcCC----cccccCCCCccEEEccCCccCcccccccc--
Q psy4162 55 TRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVD----KNMFTNFPNLKILYLHKNQIEEYLSVFVL-- 128 (210)
Q Consensus 55 L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~----~~~~~~~~~L~~L~l~~n~i~~~~~~~~~-- 128 (210)
|+.||+++|+++... +. ..+..+++++.|+|++|.++... ...+..+++|+.|++++|.++..+- ..+
T Consensus 4 l~~ld~~~~~i~~~~-~~----~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~-~~l~~ 77 (460)
T d1z7xw1 4 IQSLDIQCEELSDAR-WA----ELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGV-HCVLQ 77 (460)
T ss_dssp EEEEEEESCCCCHHH-HH----HHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHH-HHHHH
T ss_pred CCEEEeeCCcCChHH-HH----HHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHH-HHHHH
Confidence 889999999998743 11 33445578899999999877432 1234678889999999998865321 112
Q ss_pred --c-cCCCcCEEeeeCCCCCCccch-HHHHHHhCcCcccccCCCCCHHHHH
Q psy4162 129 --R-RVNSLRTLSLYGNPIEKIREY-RAVVSTMIPQLVTLDSVFILPSEKQ 175 (210)
Q Consensus 129 --~-~l~~L~~L~l~~n~l~~~~~~-~~~~l~~l~~L~~L~l~~~~~~~~~ 175 (210)
. ...+|+.|++++|.+++.... -...+..+++|+.|++++|.+.+..
T Consensus 78 ~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~ 128 (460)
T d1z7xw1 78 GLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAG 128 (460)
T ss_dssp TTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHH
T ss_pred HHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhh
Confidence 1 235799999999988765321 1124566888999999998876543
No 37
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.11 E-value=8.3e-07 Score=71.09 Aligned_cols=113 Identities=13% Similarity=0.150 Sum_probs=78.0
Q ss_pred cceeCCCCCccccchhh-hcccCCcccccCCCCCCCCCCCCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCC
Q psy4162 15 IPLDLSFQQIQSLDKVA-VQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFN 93 (210)
Q Consensus 15 ~~L~ls~n~l~~l~~~~-~~~l~~~~~~~~~~~~~~~~l~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n 93 (210)
+.||++.|+++...... +..+.+ ++.|+|++|.++... +..+. ..+..+++|+.|++++|
T Consensus 5 ~~ld~~~~~i~~~~~~~l~~~l~~-----------------l~~L~L~~~~i~~~~-~~~l~-~~L~~~~~L~~LdLs~N 65 (460)
T d1z7xw1 5 QSLDIQCEELSDARWAELLPLLQQ-----------------CQVVRLDDCGLTEAR-CKDIS-SALRVNPALAELNLRSN 65 (460)
T ss_dssp EEEEEESCCCCHHHHHHHHHHHTT-----------------CSEEEEESSCCCHHH-HHHHH-HHHHTCTTCCEEECTTC
T ss_pred CEEEeeCCcCChHHHHHHHHhCCC-----------------CCEEEeCCCCCCHHH-HHHHH-HHHhcCCCCCEEECcCC
Confidence 46999999998865443 344556 999999999887532 11111 45667789999999999
Q ss_pred CCCcCCc----cccc-CCCCccEEEccCCccCcccc--c-cccccCCCcCEEeeeCCCCCC
Q psy4162 94 NIKNVDK----NMFT-NFPNLKILYLHKNQIEEYLS--V-FVLRRVNSLRTLSLYGNPIEK 146 (210)
Q Consensus 94 ~i~~~~~----~~~~-~~~~L~~L~l~~n~i~~~~~--~-~~~~~l~~L~~L~l~~n~l~~ 146 (210)
+|+.... ..+. ...+|+.|++++|.++.... + ..+..+++|+.|++++|.+..
T Consensus 66 ~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 66 ELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp CCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred cCChHHHHHHHHHHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccchh
Confidence 8864221 1122 23579999999999876531 0 345678899999999998653
No 38
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.01 E-value=1.1e-05 Score=56.52 Aligned_cols=121 Identities=12% Similarity=0.145 Sum_probs=84.7
Q ss_pred CCccEEEccCC-ccccccCCchhhhhccCCCCCCCEEECcCCCCCcCCc----ccccCCCCccEEEccCCccCccccc--
Q psy4162 53 YDTRSLWLSHN-KISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDK----NMFTNFPNLKILYLHKNQIEEYLSV-- 125 (210)
Q Consensus 53 ~~L~~L~ls~n-~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~----~~~~~~~~L~~L~l~~n~i~~~~~~-- 125 (210)
+.|+.|+|+++ .++.- ++..+. ..+...+.|+.|++++|.+..... ..+...+.|+.|++++|.+......
T Consensus 15 ~~L~~L~L~~~~~i~~~-~~~~l~-~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKE-RIRSLI-EAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp SSCCEEECTTCCSSCHH-HHHHHH-HHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHH-HHHHHH-HHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence 45999999974 45432 222222 456677899999999999875322 2344578899999999999875421
Q ss_pred -cccccCCCcCEEeeeCCCCCCccch----HHHHHHhCcCcccccCCCCCHHHHH
Q psy4162 126 -FVLRRVNSLRTLSLYGNPIEKIREY----RAVVSTMIPQLVTLDSVFILPSEKQ 175 (210)
Q Consensus 126 -~~~~~l~~L~~L~l~~n~l~~~~~~----~~~~l~~l~~L~~L~l~~~~~~~~~ 175 (210)
..+...++|+.|++++|.+..+..- -...+...++|+.|+++.+....+.
T Consensus 93 ~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~~~~~ 147 (167)
T d1pgva_ 93 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASMEARH 147 (167)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHHHHH
T ss_pred HHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCchHHH
Confidence 2356678899999999987654221 1235677899999999888765443
No 39
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.87 E-value=6.3e-06 Score=64.16 Aligned_cols=121 Identities=17% Similarity=0.079 Sum_probs=74.7
Q ss_pred CCccEEEccCCccccccCCchhhhhccCCCCCCCEEECcCCCCCcC-----CcccccCCCCccEEEccCCccCcccc--c
Q psy4162 53 YDTRSLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNV-----DKNMFTNFPNLKILYLHKNQIEEYLS--V 125 (210)
Q Consensus 53 ~~L~~L~ls~n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~-----~~~~~~~~~~L~~L~l~~n~i~~~~~--~ 125 (210)
+.|+.+++++|.++.-.. .. +...+...+.|+.|++++|+++.. ....+..+++|+.|++++|.++.... +
T Consensus 158 ~~L~~l~l~~n~i~~~~~-~~-l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L 235 (344)
T d2ca6a1 158 PPLRSIICGRNRLENGSM-KE-WAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSAL 235 (344)
T ss_dssp CCCCEEECCSSCCTGGGH-HH-HHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHH
T ss_pred cccceeeccccccccccc-cc-ccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccc
Confidence 345555555555443210 00 113345567889999999888652 12235667889999999998765421 0
Q ss_pred -cccccCCCcCEEeeeCCCCCCccch-HHHHHHh--CcCcccccCCCCCHHHHH
Q psy4162 126 -FVLRRVNSLRTLSLYGNPIEKIREY-RAVVSTM--IPQLVTLDSVFILPSEKQ 175 (210)
Q Consensus 126 -~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~--l~~L~~L~l~~~~~~~~~ 175 (210)
..+..++.|+.|++++|.+.+.... -...+.. .+.|+.||+++|.+.+..
T Consensus 236 ~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~ 289 (344)
T d2ca6a1 236 AIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDA 289 (344)
T ss_dssp HHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHH
T ss_pred cccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHH
Confidence 3456788899999999998754321 1123333 356889999999875543
No 40
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.37 E-value=0.00013 Score=50.47 Aligned_cols=122 Identities=16% Similarity=0.083 Sum_probs=82.8
Q ss_pred CCCccEEEccC-CccccccCCchhhhhccCCCCCCCEEECcCCCCCcCCc----ccccCCCCccEEEccCCccCcccc--
Q psy4162 52 RYDTRSLWLSH-NKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDK----NMFTNFPNLKILYLHKNQIEEYLS-- 124 (210)
Q Consensus 52 l~~L~~L~ls~-n~l~~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~----~~~~~~~~L~~L~l~~n~i~~~~~-- 124 (210)
.+.|+.|++++ +.++.-. +..+. ..+...++|+.|++++|.++.... ..+....+++.+++++|.+.....
T Consensus 16 ~~~L~~L~L~~~~~i~~~~-~~~l~-~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~ 93 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPT-LKACA-EALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 93 (166)
T ss_dssp CTTCCEEECTTCTTCCHHH-HHHHH-HHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred CCCCcEEEcCCCCCCCHHH-HHHHH-HHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHH
Confidence 44599999997 4565422 12222 556678899999999998876432 234567899999999998876431
Q ss_pred -ccccccCCCcCEEee--eCCCCCCcc-chHHHHHHhCcCcccccCCCCCHHHHH
Q psy4162 125 -VFVLRRVNSLRTLSL--YGNPIEKIR-EYRAVVSTMIPQLVTLDSVFILPSEKQ 175 (210)
Q Consensus 125 -~~~~~~l~~L~~L~l--~~n~l~~~~-~~~~~~l~~l~~L~~L~l~~~~~~~~~ 175 (210)
...+...++|+.++| ++|++.... ..-...+...++|+.|++..+....+.
T Consensus 94 l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~~~~~ 148 (166)
T d1io0a_ 94 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGPRL 148 (166)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHHHH
T ss_pred HHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCCcHHH
Confidence 134567788987666 566776432 112245778999999999888765543
No 41
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.57 E-value=0.00066 Score=46.96 Aligned_cols=93 Identities=11% Similarity=0.024 Sum_probs=65.4
Q ss_pred ccCCCCCCCEEECcCC-CCCcCC----cccccCCCCccEEEccCCccCcccc--c-cccccCCCcCEEeeeCCCCCCccc
Q psy4162 78 TILDPDLIGWIDLSFN-NIKNVD----KNMFTNFPNLKILYLHKNQIEEYLS--V-FVLRRVNSLRTLSLYGNPIEKIRE 149 (210)
Q Consensus 78 ~~~~l~~L~~L~Ls~n-~i~~~~----~~~~~~~~~L~~L~l~~n~i~~~~~--~-~~~~~l~~L~~L~l~~n~l~~~~~ 149 (210)
.....+.|++|+|+++ .++... ...+....+|+.|++++|.+..... + ..+...+.|+.|++++|.+.....
T Consensus 10 l~~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~ 89 (167)
T d1pgva_ 10 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 89 (167)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHH
Confidence 3445689999999974 464421 1235567889999999999876432 1 234567899999999999986432
Q ss_pred h-HHHHHHhCcCcccccCCCCC
Q psy4162 150 Y-RAVVSTMIPQLVTLDSVFIL 170 (210)
Q Consensus 150 ~-~~~~l~~l~~L~~L~l~~~~ 170 (210)
. -...+...++|+.|++.++.
T Consensus 90 ~~l~~aL~~n~sL~~L~l~~n~ 111 (167)
T d1pgva_ 90 ARLLRSTLVTQSIVEFKADNQR 111 (167)
T ss_dssp HHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHHhCCcCCEEECCCCc
Confidence 1 11346667889999998774
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.13 E-value=0.008 Score=41.01 Aligned_cols=99 Identities=13% Similarity=0.060 Sum_probs=67.0
Q ss_pred hccCCCCCCCEEECcC-CCCCcCC----cccccCCCCccEEEccCCccCccccc---cccccCCCcCEEeeeCCCCCCcc
Q psy4162 77 RTILDPDLIGWIDLSF-NNIKNVD----KNMFTNFPNLKILYLHKNQIEEYLSV---FVLRRVNSLRTLSLYGNPIEKIR 148 (210)
Q Consensus 77 ~~~~~l~~L~~L~Ls~-n~i~~~~----~~~~~~~~~L~~L~l~~n~i~~~~~~---~~~~~l~~L~~L~l~~n~l~~~~ 148 (210)
......+.|+.|++++ +.++... ...+...++|+.|++++|.+...... ..+...+.++.+++++|.+....
T Consensus 11 ~~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g 90 (166)
T d1io0a_ 11 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 90 (166)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchh
Confidence 4456678999999997 4565432 12345788999999999998764320 23567789999999999988542
Q ss_pred ch-HHHHHHhCcCccc--ccCCCCCHHHHH
Q psy4162 149 EY-RAVVSTMIPQLVT--LDSVFILPSEKQ 175 (210)
Q Consensus 149 ~~-~~~~l~~l~~L~~--L~l~~~~~~~~~ 175 (210)
.. -...+...++|+. |++..|.+.+..
T Consensus 91 ~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~ 120 (166)
T d1io0a_ 91 ILALVEALQSNTSLIELRIDNQSQPLGNNV 120 (166)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHH
T ss_pred HHHHHHHHHhCccccEEeeccCCCcCcHHH
Confidence 21 1124566778876 555667765543
Done!