Your job contains 1 sequence.
>psy4162
MSEYYKTSIDPEFKIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWL
SHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIE
EYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQETNAL
NAEIRSYLLPKYEKLEAATFKRTAVSVESE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4162
(210 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:1916608 - symbol:Lrrc51 "leucine rich repeat cont... 237 5.7e-20 1
RGD|1565856 - symbol:Lrrc51 "leucine rich repeat containi... 235 9.2e-20 1
UNIPROTKB|Q96E66 - symbol:LRTOMT "Leucine-rich repeat-con... 223 1.7e-18 1
ZFIN|ZDB-GENE-060929-962 - symbol:lrtomt "leucine rich tr... 219 4.6e-18 1
RGD|1309150 - symbol:Lrrc48 "leucine rich repeat containi... 171 4.9e-12 1
UNIPROTKB|F1N0Q0 - symbol:LRRC48 "Uncharacterized protein... 159 9.6e-11 1
ZFIN|ZDB-GENE-061103-349 - symbol:lrrc48 "leucine rich re... 157 1.5e-10 1
UNIPROTKB|E2RI69 - symbol:LRRC48 "Uncharacterized protein... 155 2.6e-10 1
MGI|MGI:1921915 - symbol:Lrrc48 "leucine rich repeat cont... 155 2.6e-10 1
ZFIN|ZDB-GENE-051113-288 - symbol:ppp1r7 "protein phospha... 138 1.8e-07 1
UNIPROTKB|Q9H069 - symbol:LRRC48 "Leucine-rich repeat-con... 140 2.2e-07 1
RGD|1308169 - symbol:Ppp1r7 "protein phosphatase 1, regul... 132 1.3e-06 1
UNIPROTKB|Q15435 - symbol:PPP1R7 "Protein phosphatase 1 r... 131 1.7e-06 1
ZFIN|ZDB-GENE-041114-82 - symbol:snrpa1 "small nuclear ri... 123 9.7e-06 1
TAIR|locus:2183144 - symbol:AT5G19680 species:3702 "Arabi... 124 1.0e-05 1
UNIPROTKB|Q3T0W4 - symbol:PPP1R7 "Protein phosphatase 1 r... 124 1.3e-05 1
SGD|S000006090 - symbol:MEX67 "Poly(A)RNA binding protein... 125 2.2e-05 1
MGI|MGI:1913635 - symbol:Ppp1r7 "protein phosphatase 1, r... 122 2.2e-05 1
MGI|MGI:1917680 - symbol:Tbce "tubulin-specific chaperone... 124 2.3e-05 1
GENEDB_PFALCIPARUM|MAL8P1.46 - symbol:MAL8P1.46 "outer ar... 116 2.4e-05 1
UNIPROTKB|Q8IB59 - symbol:MAL8P1.46 "Outer arm dynein lig... 116 2.4e-05 1
DICTYBASE|DDB_G0284101 - symbol:snrpA1 "U2 small nuclear ... 118 2.9e-05 1
ZFIN|ZDB-GENE-031114-4 - symbol:dnaaf1 "dynein, axonemal,... 121 6.0e-05 1
POMBASE|SPAC4A8.12c - symbol:sds22 "protein phosphatase r... 117 7.8e-05 1
MGI|MGI:1921685 - symbol:Lrriq3 "leucine-rich repeats and... 118 0.00016 1
UNIPROTKB|Q9WV82 - symbol:TLR4 "Toll-like receptor 4" spe... 119 0.00018 1
UNIPROTKB|I3LT68 - symbol:LOC100620561 "Uncharacterized p... 117 0.00022 1
UNIPROTKB|Q68Y56 - symbol:TLR4 "Toll-like receptor 4" spe... 118 0.00024 1
UNIPROTKB|Q9MYW3 - symbol:TLR4 "Toll-like receptor 4" spe... 118 0.00024 1
UNIPROTKB|F1PDB9 - symbol:TLR4 "Toll-like receptor" speci... 117 0.00030 1
UNIPROTKB|F1SMI0 - symbol:TLR4 "Toll-like receptor" speci... 117 0.00031 1
UNIPROTKB|E1BVG6 - symbol:LRRC48 "Uncharacterized protein... 114 0.00037 1
ZFIN|ZDB-GENE-040426-2448 - symbol:anp32e "acidic (leucin... 109 0.00039 1
FB|FBgn0014395 - symbol:tilB "touch insensitive larva B" ... 111 0.00055 1
ZFIN|ZDB-GENE-030131-7850 - symbol:anp32a "acidic (leucin... 107 0.00076 1
>MGI|MGI:1916608 [details] [associations]
symbol:Lrrc51 "leucine rich repeat containing 51"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1916608 GO:GO:0005737 EMBL:CH466531
eggNOG:NOG312906 HOVERGEN:HBG055282 OrthoDB:EOG4VX268
ChiTaRS:LRTOMT EMBL:EU627089 EMBL:EU627090 EMBL:AK005758
EMBL:BC025128 IPI:IPI00118755 IPI:IPI00658843 RefSeq:NP_001156446.1
RefSeq:NP_081329.1 UniGene:Mm.214841 ProteinModelPortal:Q9DAK8
SMR:Q9DAK8 PRIDE:Q9DAK8 DNASU:69358 Ensembl:ENSMUST00000098236
Ensembl:ENSMUST00000106963 Ensembl:ENSMUST00000106964
Ensembl:ENSMUST00000163903 GeneID:69358 KEGG:mmu:69358
UCSC:uc009ipx.2 UCSC:uc009ipy.2 CTD:69358
GeneTree:ENSGT00510000047925 HOGENOM:HOG000067975 InParanoid:Q9DAK8
NextBio:329212 Bgee:Q9DAK8 CleanEx:MM_LRRC51 Genevestigator:Q9DAK8
GermOnline:ENSMUSG00000064307 Uniprot:Q9DAK8
Length = 192
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 54/163 (33%), Positives = 92/163 (56%)
Query: 3 EYYKTSIDPEFKIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSH 62
+Y TS+ PLD SF+ +Q + + ++ + + + S G+ T+SLWL++
Sbjct: 5 DYMNTSVQEP---PLDYSFKSVQMVQDLVTEEPRTGLRPVRHSKS---GKSLTQSLWLNN 58
Query: 63 NKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEY 122
N ++ + + +V + + P+ + WIDLSFN++ +D + T F NL +LYLH N I
Sbjct: 59 NVLNDLKDFNQVVSQLLQHPENLAWIDLSFNDLTTIDP-VLTTFFNLSVLYLHGNGIHRL 117
Query: 123 LSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 165
V L + LR+L+L+GNPIE+ + YR V +P++ T D
Sbjct: 118 GEVNKLAVLPRLRSLTLHGNPIEEEKGYRQYVLCNLPRITTFD 160
>RGD|1565856 [details] [associations]
symbol:Lrrc51 "leucine rich repeat containing 51" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1565856 GO:GO:0005737
EMBL:CH473956 eggNOG:NOG312906 OrthoDB:EOG4VX268 CTD:69358
GeneTree:ENSGT00510000047925 HOGENOM:HOG000067975 EMBL:EU627092
IPI:IPI00199973 RefSeq:NP_001099754.1 UniGene:Rn.162471
Ensembl:ENSRNOT00000027261 GeneID:293156 KEGG:rno:293156
UCSC:RGD:1565856 OMA:RPLKHSK NextBio:635481 Genevestigator:B6CZ61
Uniprot:B6CZ61
Length = 192
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 54/163 (33%), Positives = 92/163 (56%)
Query: 3 EYYKTSIDPEFKIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSH 62
+Y TS+ PLD SF+ +Q + + ++ + + + S G+ T+SLWL++
Sbjct: 5 DYMNTSVQEP---PLDYSFKSVQMIQDLISEEPRTGLRPVKYSKS---GKSLTQSLWLNN 58
Query: 63 NKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEY 122
N ++ + + +V + + P+ + WIDLSFN++ +D + T F NL +LYLH N I
Sbjct: 59 NVLNDLKDFNQVVSQLLQHPENLAWIDLSFNDLTTIDP-VLTTFFNLSVLYLHGNSIHRL 117
Query: 123 LSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 165
V L + LR+L+L+GNPIE+ + YR V +P++ T D
Sbjct: 118 GEVNKLAVLPRLRSLTLHGNPIEEEKGYRQYVLCNLPRITTFD 160
>UNIPROTKB|Q96E66 [details] [associations]
symbol:LRTOMT "Leucine-rich repeat-containing protein 51"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005737 EMBL:CH471076
EMBL:AP000812 Orphanet:90636 EMBL:AP002490 EMBL:EU627066
EMBL:EU627067 EMBL:EU627068 EMBL:EU627069 EMBL:EU627070
EMBL:AK298997 EMBL:AK313150 EMBL:BC012855 IPI:IPI00061250
IPI:IPI00914874 IPI:IPI00914888 IPI:IPI00922825 IPI:IPI00926911
RefSeq:NP_001138779.1 RefSeq:NP_001192067.1 RefSeq:NP_001258400.1
RefSeq:NP_660352.1 UniGene:Hs.317243 ProteinModelPortal:Q96E66
SMR:Q96E66 STRING:Q96E66 DMDM:74760801 PRIDE:Q96E66 DNASU:220074
Ensembl:ENST00000289488 Ensembl:ENST00000324866
Ensembl:ENST00000423494 Ensembl:ENST00000427369
Ensembl:ENST00000447974 Ensembl:ENST00000536917
Ensembl:ENST00000538478 Ensembl:ENST00000541614
Ensembl:ENST00000544409 GeneID:220074 KEGG:hsa:220074
UCSC:uc001orr.3 UCSC:uc010rqs.2 CTD:220074 GeneCards:GC11P071792
HGNC:HGNC:25033 HPA:HPA039949 MIM:612414 neXtProt:NX_Q96E66
PharmGKB:PA164722133 eggNOG:NOG312906 HOVERGEN:HBG055282
InParanoid:Q96E66 OrthoDB:EOG4VX268 PhylomeDB:Q96E66 ChiTaRS:LRTOMT
GenomeRNAi:220074 NextBio:90973 ArrayExpress:Q96E66 Bgee:Q96E66
CleanEx:HS_LRTOMT Genevestigator:Q96E66 GermOnline:ENSG00000184154
Uniprot:Q96E66
Length = 192
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 52/163 (31%), Positives = 91/163 (55%)
Query: 3 EYYKTSIDPEFKIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSH 62
+Y TS+ PLD SF+ I + + ++ + + L S G+ T+SLWL++
Sbjct: 5 DYMNTSVQEP---PLDYSFRSIHVIQDLVNEEPRTGLRPLKRSKS---GKSLTQSLWLNN 58
Query: 63 NKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEY 122
N ++ + + + + + P+ + WIDLSFN++ ++D + T F NL +LYLH N I+
Sbjct: 59 NVLNDLRDFNQVASQLLEHPENLAWIDLSFNDLTSIDP-VLTTFFNLSVLYLHGNSIQRL 117
Query: 123 LSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 165
V L + LR+L+L+GNP+E+ + YR V + ++ T D
Sbjct: 118 GEVNKLAVLPRLRSLTLHGNPMEEEKGYRQYVLCTLSRITTFD 160
>ZFIN|ZDB-GENE-060929-962 [details] [associations]
symbol:lrtomt "leucine rich transmembrane and
0-methyltransferase domain containing" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-060929-962 InterPro:IPR003603
SMART:SM00446 CTD:220074 eggNOG:NOG312906 HOVERGEN:HBG055282
OrthoDB:EOG4VX268 HOGENOM:HOG000067975 EMBL:BC124442
IPI:IPI00637356 RefSeq:NP_001070236.1 UniGene:Dr.83523
ProteinModelPortal:Q08C25 GeneID:767801 KEGG:dre:767801
InParanoid:Q08C25 NextBio:20918179 ArrayExpress:Q08C25
Uniprot:Q08C25
Length = 181
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 55/184 (29%), Positives = 93/184 (50%)
Query: 13 FKIPLDLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGR--YDTRSLWLSHNKISLVYG 70
F +D SF++I ++ V + H PP + + + S L++N I + G
Sbjct: 2 FGSSVDFSFKEINTISDVLSDVPNSSAH-----PPKRDSKKKFISMSFRLNNNSIKDLTG 56
Query: 71 LDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRR 130
L + +P + W+DLSFN IK++D ++ T L++LYLH N I+E V L
Sbjct: 57 LMDTLSALFSEPTRLAWLDLSFNEIKHID-SVLTQLKELRLLYLHGNNIQELSEVDKLAV 115
Query: 131 VNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQETNALNAEIRSYLLP 190
+ SL T++L+GNPI R+YRA + M+P + +D + E++ T+ ++
Sbjct: 116 LPSLHTITLHGNPIVSERDYRAHLIAMLPHVKMIDFSAVTKQERELTSVWQKSKNTHKST 175
Query: 191 KYEK 194
Y K
Sbjct: 176 GYSK 179
>RGD|1309150 [details] [associations]
symbol:Lrrc48 "leucine rich repeat containing 48" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 RGD:1309150
GO:GO:0005737 eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799
CTD:83450 HOGENOM:HOG000007647 HOVERGEN:HBG079481 OrthoDB:EOG4FXR86
GeneTree:ENSGT00670000097777 EMBL:BC083838 IPI:IPI00369548
RefSeq:NP_001013879.1 UniGene:Rn.137189 ProteinModelPortal:Q5XI54
PRIDE:Q5XI54 Ensembl:ENSRNOT00000032685 GeneID:287371
KEGG:rno:287371 UCSC:RGD:1309150 InParanoid:Q5XI54 NextBio:625977
Genevestigator:Q5XI54 GermOnline:ENSRNOG00000021303 Uniprot:Q5XI54
Length = 523
Score = 171 (65.3 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 15 IPLDLSFQQIQSLDKV----AVQKLKPNVHRLGESPPMLVGRYDTRSLWL--SHNKISLV 68
+ L L FQ I +D + ++KL+ N + + E L T +WL S N I +
Sbjct: 46 LALQLDFQNILRIDNLWQFENLRKLQLN-NNIIERIEGLENL--THLVWLDLSFNNIEAI 102
Query: 69 YGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVL 128
GLD+LV+ L+ DL LS N I +D NL++L L NQI +++ L
Sbjct: 103 EGLDTLVN---LE-DL----SLSHNRISKIDS--LDPLVNLQVLSLGNNQINNMMNIIYL 152
Query: 129 RRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 165
RR LRTLSL GNP+ + EY+ + +P LV LD
Sbjct: 153 RRFPCLRTLSLSGNPVSEAEEYKVFIYAYLPDLVYLD 189
>UNIPROTKB|F1N0Q0 [details] [associations]
symbol:LRRC48 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 InterPro:IPR025875 Pfam:PF12799
OMA:DKFVIIC GeneTree:ENSGT00670000097777 EMBL:DAAA02048995
EMBL:DAAA02048993 EMBL:DAAA02048994 IPI:IPI00714738
UniGene:Bt.16364 Ensembl:ENSBTAT00000011591 Uniprot:F1N0Q0
Length = 522
Score = 159 (61.0 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 55/159 (34%), Positives = 82/159 (51%)
Query: 15 IPLDLSFQQIQSLDKV----AVQKLKPNVHRLGESPPMLVGRYDTRSLWL--SHNKISLV 68
+ L L FQ I +D + ++QKL+ + + + E L TR +WL S N I +
Sbjct: 45 VSLQLDFQNILRIDNLWQFESLQKLQLD-NNIIEKIEGLENL--TRLVWLDLSFNNIEAI 101
Query: 69 YGLDSLVHRTILDPDLIGWIDLS-FNN-IKNVDKNMFTNFPNLKILYLHKNQIEEYLSVF 126
GLD+LV+ L+ DLS FNN I +D L++L L N I +++
Sbjct: 102 EGLDTLVN---LE-------DLSLFNNRISKIDS--LDALVKLQVLSLGNNHIGNMMNII 149
Query: 127 VLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 165
LRR +LRTLSL GNP+ + +Y+ + +P LV LD
Sbjct: 150 YLRRFKALRTLSLSGNPVAEDEDYKMFICAYLPDLVYLD 188
>ZFIN|ZDB-GENE-061103-349 [details] [associations]
symbol:lrrc48 "leucine rich repeat containing 48"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-061103-349 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00670000097777 EMBL:CABZ01079582 IPI:IPI00771868
Ensembl:ENSDART00000060527 OMA:RDLENIH ArrayExpress:F1R517
Bgee:F1R517 Uniprot:F1R517
Length = 513
Score = 157 (60.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 52/129 (40%), Positives = 70/129 (54%)
Query: 55 TRSLWL--SHNKISLVYGLDSLVHRTILDPDLIGWIDLS-FNNIKNVDKNMFTNFPNLKI 111
T WL S NKI ++ GL +LV DLS FNN +V +N+ T L++
Sbjct: 78 TNLTWLDLSFNKIEVIEGLQTLVKLQ----------DLSLFNNRISVIENLDT-LQRLQV 126
Query: 112 LYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILP 171
L L N I + +V LRR SLRTL+L GNPI + Y+ VS +P+LV LD +L
Sbjct: 127 LSLGNNSIAQLENVIYLRRFQSLRTLNLAGNPICEEDRYKTFVSAYLPELVYLD-YRLLD 185
Query: 172 SEKQET-NA 179
+ +ET NA
Sbjct: 186 EQTRETANA 194
>UNIPROTKB|E2RI69 [details] [associations]
symbol:LRRC48 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005737 InterPro:IPR025875
Pfam:PF12799 OMA:DKFVIIC GeneTree:ENSGT00670000097777
EMBL:AAEX03003718 EMBL:AAEX03003719 Ensembl:ENSCAFT00000029240
Uniprot:E2RI69
Length = 522
Score = 155 (59.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 47/128 (36%), Positives = 65/128 (50%)
Query: 58 LWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNV----------DKNMFTN-- 105
L L +N I + GL+ LVH L+ W+DLSFNNI+ + D ++F N
Sbjct: 70 LQLDNNIIEKIEGLEQLVH-------LV-WLDLSFNNIEAIEGLDTLVNLEDLSLFNNRI 121
Query: 106 --------FPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTM 157
L++L L NQI +++ LRR LRTLSL GNPI + +Y+ V
Sbjct: 122 SKIDSLDALVKLQVLSLGNNQIGNMMNIIYLRRFKDLRTLSLSGNPIAESEDYKMFVCAY 181
Query: 158 IPQLVTLD 165
+P LV LD
Sbjct: 182 LPDLVYLD 189
>MGI|MGI:1921915 [details] [associations]
symbol:Lrrc48 "leucine rich repeat containing 48"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921915 GO:GO:0005737
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 EMBL:AL596090
CTD:83450 HOGENOM:HOG000007647 HOVERGEN:HBG079481 OMA:DKFVIIC
OrthoDB:EOG4FXR86 EMBL:AK015430 EMBL:BC018412 IPI:IPI00648572
RefSeq:NP_083320.1 UniGene:Mm.133570 ProteinModelPortal:Q9D5E4
SMR:Q9D5E4 PaxDb:Q9D5E4 PRIDE:Q9D5E4 Ensembl:ENSMUST00000108723
GeneID:74665 KEGG:mmu:74665 UCSC:uc007jfu.1
GeneTree:ENSGT00670000097777 InParanoid:Q9D5E4 NextBio:341334
Bgee:Q9D5E4 CleanEx:MM_LRRC48 Genevestigator:Q9D5E4
GermOnline:ENSMUSG00000056598 Uniprot:Q9D5E4
Length = 523
Score = 155 (59.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 54/155 (34%), Positives = 76/155 (49%)
Query: 15 IPLDLSFQQIQSLDKV----AVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYG 70
+ L L FQ I +D + ++KL+ N + + E L L LS N I + G
Sbjct: 46 LSLQLDFQNILRIDNLWQFENLKKLQLN-NNIIERIEGLTNLIHLVWLDLSFNNIEAIEG 104
Query: 71 LDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRR 130
LD+LV+ L+ DL LS N I VD L++L L NQI +++ LRR
Sbjct: 105 LDTLVN---LE-DL----SLSNNRISKVDS--LDALVKLQVLSLGNNQISNMMNIIYLRR 154
Query: 131 VNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 165
LRTLSL GNP+ + EY+ + + LV LD
Sbjct: 155 FPCLRTLSLAGNPVSEAEEYKMFIYAYLSDLVYLD 189
>ZFIN|ZDB-GENE-051113-288 [details] [associations]
symbol:ppp1r7 "protein phosphatase 1, regulatory
(inhibitor) subunit 7" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-051113-288 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00670000097777 CTD:5510 HOGENOM:HOG000211189
HOVERGEN:HBG082161 OMA:PQYRRKI OrthoDB:EOG4894MX EMBL:BC108074
IPI:IPI00501923 RefSeq:NP_001032463.1 UniGene:Dr.76971
ProteinModelPortal:Q32PL1 STRING:Q32PL1 Ensembl:ENSDART00000022356
GeneID:560323 KEGG:dre:560323 InParanoid:Q32PL1 NextBio:20883385
Bgee:Q32PL1 Uniprot:Q32PL1
Length = 345
Score = 138 (53.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 42/151 (27%), Positives = 79/151 (52%)
Query: 23 QIQSLD---KVAVQKLKPN-VHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRT 78
Q+Q+LD + V ++ N + +L E LV + R L+LSHN I ++ GL++
Sbjct: 207 QLQNLDGLHNLTVLSIQSNRITKL-EGLQNLV---NLRELYLSHNGIEVMEGLEN----- 257
Query: 79 ILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLS 138
+ +D++ N IK ++ ++ +LK +++ NQIE + + L+ L T+
Sbjct: 258 ---NKKLSTLDIAANRIKKIEN--ISHLTDLKEFWMNDNQIENWADLDELKNAKGLETVY 312
Query: 139 LYGNPIEKIREYRAVVSTMIPQLVTLDSVFI 169
L NP++K +YR + +P + +D+ FI
Sbjct: 313 LERNPLQKDPQYRRKIMLALPSVRQIDATFI 343
>UNIPROTKB|Q9H069 [details] [associations]
symbol:LRRC48 "Leucine-rich repeat-containing protein 48"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005737 eggNOG:COG4886
InterPro:IPR025875 Pfam:PF12799 EMBL:AL136926 EMBL:AK293011
EMBL:BC040276 EMBL:BC047873 EMBL:BC050419 EMBL:BC050665
IPI:IPI00337516 IPI:IPI00737755 RefSeq:NP_001123562.1
RefSeq:NP_001123563.1 RefSeq:NP_001123564.1 RefSeq:NP_112584.3
UniGene:Hs.579264 ProteinModelPortal:Q9H069 SMR:Q9H069
DMDM:74761374 PaxDb:Q9H069 PRIDE:Q9H069 DNASU:83450
Ensembl:ENST00000313838 Ensembl:ENST00000399182
Ensembl:ENST00000399184 Ensembl:ENST00000399185
Ensembl:ENST00000399187 Ensembl:ENST00000411504
Ensembl:ENST00000448396 Ensembl:ENST00000584166 GeneID:83450
KEGG:hsa:83450 UCSC:uc010vxe.2 UCSC:uc021trj.1 CTD:83450
GeneCards:GC17P017816 HGNC:HGNC:25384 HPA:HPA036040
neXtProt:NX_Q9H069 PharmGKB:PA142671508 HOGENOM:HOG000007647
HOVERGEN:HBG079481 InParanoid:Q9H069 OMA:DKFVIIC OrthoDB:EOG4FXR86
GenomeRNAi:83450 NextBio:72364 Bgee:Q9H069 CleanEx:HS_LRRC48
Genevestigator:Q9H069 GermOnline:ENSG00000171962 Uniprot:Q9H069
Length = 523
Score = 140 (54.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 42/124 (33%), Positives = 61/124 (49%)
Query: 56 RSLWLSHNKISLVYGLDSLVHRTILD------------PDLIGWIDLS-FNN-IKNVDKN 101
R L L +N I + GL++L H LD L+ DLS FNN I +D
Sbjct: 68 RKLQLDNNIIEKIEGLENLAHLVWLDLSFNNIETIEGLDTLVNLEDLSLFNNRISKIDS- 126
Query: 102 MFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQL 161
L++L L N+I+ +++ LRR LRTLSL NPI + +Y+ + +P L
Sbjct: 127 -LDALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRTLSLSRNPISEAEDYKMFICAYLPDL 185
Query: 162 VTLD 165
+ LD
Sbjct: 186 MYLD 189
>RGD|1308169 [details] [associations]
symbol:Ppp1r7 "protein phosphatase 1, regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 RGD:1308169
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00670000097777
CTD:5510 HOGENOM:HOG000211189 HOVERGEN:HBG082161 OMA:PQYRRKI
OrthoDB:EOG4894MX EMBL:BC088868 IPI:IPI00358083
RefSeq:NP_001009825.1 UniGene:Rn.19437 ProteinModelPortal:Q5HZV9
IntAct:Q5HZV9 STRING:Q5HZV9 PhosphoSite:Q5HZV9 PRIDE:Q5HZV9
Ensembl:ENSRNOT00000022854 GeneID:301618 KEGG:rno:301618
UCSC:RGD:1308169 InParanoid:Q5HZV9 NextBio:649024
Genevestigator:Q5HZV9 GermOnline:ENSRNOG00000016974 Uniprot:Q5HZV9
Length = 360
Score = 132 (51.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/148 (26%), Positives = 75/148 (50%)
Query: 22 QQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTILD 81
Q + +L + V ++ N RL + L + R L+LSHN I ++ GL++ T+LD
Sbjct: 224 QNLDALSNLTVLSMQSN--RLTKIEG-LQNLVNLRELYLSHNGIEVIEGLENNNKLTMLD 280
Query: 82 PDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYG 141
++ N IK ++ ++ L+ +++ N +E + + L+ SL T+ L
Sbjct: 281 --------IASNRIKKIEN--ISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLER 330
Query: 142 NPIEKIREYRAVVSTMIPQLVTLDSVFI 169
NP++K +YR V +P + +D+ F+
Sbjct: 331 NPLQKDPQYRRKVMLALPSVRQIDATFV 358
>UNIPROTKB|Q15435 [details] [associations]
symbol:PPP1R7 "Protein phosphatase 1 regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0030234 "enzyme
regulator activity" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0008599 "protein phosphatase type 1 regulator
activity" evidence=TAS] [GO:0050790 "regulation of catalytic
activity" evidence=NAS] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005634 GO:GO:0005737 EMBL:CH471063 eggNOG:COG4886
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
GO:GO:0008599 CTD:5510 HOGENOM:HOG000211189 HOVERGEN:HBG082161
OMA:PQYRRKI OrthoDB:EOG4894MX EMBL:Z50749 EMBL:AF067136
EMBL:AF067130 EMBL:AF067132 EMBL:AF067133 EMBL:AF067134
EMBL:AF067135 EMBL:AF067131 EMBL:BT007296 EMBL:BT020134
EMBL:AK294043 EMBL:BC000910 EMBL:BC012397 EMBL:BC013001
IPI:IPI00033600 IPI:IPI00395771 IPI:IPI00759705 IPI:IPI00759816
PIR:S68209 RefSeq:NP_002703.1 UniGene:Hs.36587
ProteinModelPortal:Q15435 SMR:Q15435 DIP:DIP-1005N IntAct:Q15435
STRING:Q15435 PhosphoSite:Q15435 DMDM:74762145
REPRODUCTION-2DPAGE:IPI00033600 PaxDb:Q15435 PRIDE:Q15435
DNASU:5510 Ensembl:ENST00000234038 Ensembl:ENST00000272983
Ensembl:ENST00000401987 Ensembl:ENST00000406106
Ensembl:ENST00000407025 GeneID:5510 KEGG:hsa:5510 UCSC:uc002was.3
UCSC:uc002wat.1 UCSC:uc002wau.1 GeneCards:GC02P242088
HGNC:HGNC:9295 HPA:HPA034501 MIM:602877 neXtProt:NX_Q15435
PharmGKB:PA33658 InParanoid:Q15435 PhylomeDB:Q15435 ChiTaRS:PPP1R7
GenomeRNAi:5510 NextBio:21312 ArrayExpress:Q15435 Bgee:Q15435
CleanEx:HS_PPP1R7 Genevestigator:Q15435 GermOnline:ENSG00000115685
Uniprot:Q15435
Length = 360
Score = 131 (51.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 39/148 (26%), Positives = 75/148 (50%)
Query: 22 QQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTILD 81
Q + +L + V ++ N RL + L + R L+LSHN I ++ GL++ T+LD
Sbjct: 224 QNLDALTNLTVLSMQSN--RLTKIEG-LQNLVNLRELYLSHNGIEVIEGLENNNKLTMLD 280
Query: 82 PDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYG 141
++ N IK ++ ++ L+ +++ N +E + + L+ SL T+ L
Sbjct: 281 --------IASNRIKKIEN--ISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLER 330
Query: 142 NPIEKIREYRAVVSTMIPQLVTLDSVFI 169
NP++K +YR V +P + +D+ F+
Sbjct: 331 NPLQKDPQYRRKVMLALPSVRQIDATFV 358
>ZFIN|ZDB-GENE-041114-82 [details] [associations]
symbol:snrpa1 "small nuclear ribonucleoprotein
polypeptide A'" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-041114-82 InterPro:IPR003603
SMART:SM00446 KO:K11092 GeneTree:ENSGT00510000047131 CTD:6627
EMBL:CU856378 IPI:IPI00992962 RefSeq:NP_001007384.2
UniGene:Dr.14067 Ensembl:ENSDART00000128530 GeneID:492511
KEGG:dre:492511 NextBio:20865071 Bgee:F1R300 Uniprot:F1R300
Length = 277
Score = 123 (48.4 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 36/108 (33%), Positives = 50/108 (46%)
Query: 93 NNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRA 152
N I + +N+ P+LK L L N I+E + L V SL LSL NP+ + YR
Sbjct: 74 NRICRIGENLEQALPDLKELILTSNNIQELGDLDPLATVKSLSLLSLLRNPVTNKKHYRL 133
Query: 153 VVSTMIPQLVTLDSVFILPSEKQETNALNAEIRSYLLPKYEKLEAATF 200
V IPQ+ LD + E+QE + R L K ++ TF
Sbjct: 134 YVINKIPQIRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAKQSKTF 181
>TAIR|locus:2183144 [details] [associations]
symbol:AT5G19680 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000211189
HSSP:Q9XHH2 EMBL:BT003139 EMBL:AK228123 IPI:IPI00542629
RefSeq:NP_197469.1 UniGene:At.23794 ProteinModelPortal:Q84WJ9
SMR:Q84WJ9 IntAct:Q84WJ9 PaxDb:Q84WJ9 PRIDE:Q84WJ9
EnsemblPlants:AT5G19680.1 GeneID:832088 KEGG:ath:AT5G19680
TAIR:At5g19680 InParanoid:Q84WJ9 OMA:ANIQKVQ PhylomeDB:Q84WJ9
ProtClustDB:CLSN2687164 Genevestigator:Q84WJ9 Uniprot:Q84WJ9
Length = 328
Score = 124 (48.7 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 39/111 (35%), Positives = 57/111 (51%)
Query: 58 LWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKN 117
L+LSHN IS + GL +LV+ +LD +S N + +VD N L+ L+L+ N
Sbjct: 224 LYLSHNGISKMEGLSALVNLRVLD--------VSNNKLTSVDD--IQNLTKLEDLWLNDN 273
Query: 118 QIE--EYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDS 166
QIE E ++ V L T+ L NP K +Y A V + P + +DS
Sbjct: 274 QIESLEAITEAVTGSKEKLTTIYLENNPCAKSSDYVAAVRQIFPNVEQIDS 324
>UNIPROTKB|Q3T0W4 [details] [associations]
symbol:PPP1R7 "Protein phosphatase 1 regulatory subunit 7"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00670000097777 EMBL:BC102228 IPI:IPI00685276
RefSeq:NP_001029410.1 UniGene:Bt.48815 ProteinModelPortal:Q3T0W4
STRING:Q3T0W4 PRIDE:Q3T0W4 Ensembl:ENSBTAT00000001045 GeneID:505297
KEGG:bta:505297 CTD:5510 HOGENOM:HOG000211189 HOVERGEN:HBG082161
InParanoid:Q3T0W4 OMA:PQYRRKI OrthoDB:EOG4894MX NextBio:20867069
Uniprot:Q3T0W4
Length = 360
Score = 124 (48.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/148 (25%), Positives = 76/148 (51%)
Query: 22 QQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTILD 81
Q + +L + V ++ N E LV + R L+LSHN I ++ GLD+ T+LD
Sbjct: 224 QNLDALTNLTVLSMQSNRLTKIEGLQSLV---NLRELYLSHNGIEVIEGLDNNNKLTMLD 280
Query: 82 PDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYG 141
++ N IK ++ N+ ++ L+ +++ N ++ + + L+ SL T+ L
Sbjct: 281 --------IASNRIKKIE-NV-SHLTELQEFWMNDNLLDCWSDLDELKGARSLETVYLER 330
Query: 142 NPIEKIREYRAVVSTMIPQLVTLDSVFI 169
NP+++ +YR + +P + +D+ F+
Sbjct: 331 NPLQRDPQYRRKIMLALPSVRQIDATFV 358
>SGD|S000006090 [details] [associations]
symbol:MEX67 "Poly(A)RNA binding protein involved in nuclear
mRNA export" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006406 "mRNA
export from nucleus" evidence=IMP] [GO:0017056 "structural
constituent of nuclear pore" evidence=IDA] [GO:0042272 "nuclear RNA
export factor complex" evidence=IPI] [GO:0000055 "ribosomal large
subunit export from nucleus" evidence=IGI;IMP] [GO:0003723 "RNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IDA] InterPro:IPR001611 InterPro:IPR005637
InterPro:IPR009060 Pfam:PF03943 PROSITE:PS51281 PROSITE:PS51450
SMART:SM00804 SGD:S000006090 GO:GO:0005737 GO:GO:0005643
GO:GO:0003723 EMBL:BK006949 GO:GO:0006406 EMBL:X96770
SUPFAM:SSF46934 GO:GO:0042272 GO:GO:0000055 InterPro:IPR018222
PROSITE:PS50177 TCDB:9.A.14.1.1 GO:GO:0017056 eggNOG:NOG324438
KO:K14284 OMA:GFVITLH OrthoDB:EOG4H49CN EMBL:Z73525 PIR:S65180
RefSeq:NP_015156.1 PDB:1OF5 PDB:2JP7 PDB:2KHH PDBsum:1OF5
PDBsum:2JP7 PDBsum:2KHH ProteinModelPortal:Q99257 SMR:Q99257
DIP:DIP-3984N IntAct:Q99257 MINT:MINT-441559 STRING:Q99257
PaxDb:Q99257 PeptideAtlas:Q99257 EnsemblFungi:YPL169C GeneID:855934
KEGG:sce:YPL169C CYGD:YPL169c GeneTree:ENSGT00390000007539
HOGENOM:HOG000248843 EvolutionaryTrace:Q99257 NextBio:980681
Genevestigator:Q99257 GermOnline:YPL169C Uniprot:Q99257
Length = 599
Score = 125 (49.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 31/93 (33%), Positives = 51/93 (54%)
Query: 88 IDLSFNNIKNVD--KNMFTNFPNLKILYLHKNQIEEYLSVFVLR-RVNSLRTLSLYGNPI 144
++L+ N +K++ + FPNLK L L NQI + S+ V + + LR L + NPI
Sbjct: 167 VNLADNQLKDISAISTLAQTFPNLKNLCLANNQIFRFRSLEVWKNKFKDLRELLMTNNPI 226
Query: 145 EKIREYRAVVSTMIPQLVTLDSVFILPSEKQET 177
+ YR + + P+LV LD+V + +K +T
Sbjct: 227 TTDKLYRTEMLRLFPKLVVLDNVIVRDEQKLQT 259
>MGI|MGI:1913635 [details] [associations]
symbol:Ppp1r7 "protein phosphatase 1, regulatory (inhibitor)
subunit 7" species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1913635
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00670000097777
CTD:5510 HOGENOM:HOG000211189 HOVERGEN:HBG082161 OMA:PQYRRKI
OrthoDB:EOG4894MX EMBL:AF067129 EMBL:AF222867 EMBL:AK009870
EMBL:AK145136 EMBL:AK162517 EMBL:BC013524 IPI:IPI00129319
RefSeq:NP_075689.1 UniGene:Mm.88704 ProteinModelPortal:Q3UM45
SMR:Q3UM45 STRING:Q3UM45 REPRODUCTION-2DPAGE:Q3UM45 PaxDb:Q3UM45
PRIDE:Q3UM45 Ensembl:ENSMUST00000027494 GeneID:66385 KEGG:mmu:66385
UCSC:uc007cdv.1 InParanoid:Q3UM45 NextBio:321517 Bgee:Q3UM45
Genevestigator:Q3UM45 GermOnline:ENSMUSG00000026275 Uniprot:Q3UM45
Length = 361
Score = 122 (48.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/148 (25%), Positives = 75/148 (50%)
Query: 22 QQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTILD 81
Q + +L + V ++ N RL + L + R L+LS+N I ++ GL++ T+LD
Sbjct: 225 QNLDALTNLTVLSVQSN--RLAKIEG-LQSLVNLRELYLSNNGIEVIEGLENNNKLTMLD 281
Query: 82 PDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYG 141
++ N IK ++ ++ L+ +++ N +E + + L+ SL T+ L
Sbjct: 282 --------IASNRIKKIEN--ISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLER 331
Query: 142 NPIEKIREYRAVVSTMIPQLVTLDSVFI 169
NP++K +YR V +P + +D+ ++
Sbjct: 332 NPLQKDPQYRRKVMLALPSVRQIDATYV 359
>MGI|MGI:1917680 [details] [associations]
symbol:Tbce "tubulin-specific chaperone E" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006457 "protein folding"
evidence=TAS] [GO:0007021 "tubulin complex assembly" evidence=TAS]
[GO:0007023 "post-chaperonin tubulin folding pathway" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0008344 "adult
locomotory behavior" evidence=IMP] [GO:0009791 "post-embryonic
development" evidence=IMP] [GO:0014889 "muscle atrophy"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IMP] [GO:0051082 "unfolded protein binding" evidence=TAS]
InterPro:IPR000938 MGI:MGI:1917680 Pfam:PF01302 GO:GO:0005737
GO:GO:0000226 GO:GO:0005856 GO:GO:0051082 GO:GO:0008344
GO:GO:0009791 GO:GO:0048589 GO:GO:0007021 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
eggNOG:NOG245706 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 CTD:6905
HOGENOM:HOG000154513 HOVERGEN:HBG084170 OMA:CLRNPLT
OrthoDB:EOG41NTKV EMBL:AY082332 EMBL:AK167383 EMBL:BC050206
IPI:IPI00229931 RefSeq:NP_848027.1 UniGene:Mm.260209 PDB:1WJN
PDBsum:1WJN ProteinModelPortal:Q8CIV8 SMR:Q8CIV8 STRING:Q8CIV8
PhosphoSite:Q8CIV8 PaxDb:Q8CIV8 PRIDE:Q8CIV8
Ensembl:ENSMUST00000039894 GeneID:70430 KEGG:mmu:70430
UCSC:uc007pmq.1 InParanoid:Q8CIV8 EvolutionaryTrace:Q8CIV8
NextBio:331607 Bgee:Q8CIV8 CleanEx:MM_TBCE Genevestigator:Q8CIV8
GermOnline:ENSMUSG00000039233 Uniprot:Q8CIV8
Length = 524
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 60 LSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQI 119
+ +++SL+ L L H + D IG + F + + K FP LK L ++ NQI
Sbjct: 266 IDESQLSLIADLPRLEHLVLSD---IGLSSIHFPDAEIGCKTSM--FPALKYLIVNDNQI 320
Query: 120 EEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQ 175
E+ + L ++ SL+ LS NP+ K + ++ I QL TL+ ILP E++
Sbjct: 321 SEWSFINELDKLQSLQALSCTRNPLSKADKAEEIIIAKIAQLRTLNRCQILPEERR 376
>GENEDB_PFALCIPARUM|MAL8P1.46 [details] [associations]
symbol:MAL8P1.46 "outer arm dynein light chain
2" species:5833 "Plasmodium falciparum" [GO:0003774 "motor
activity" evidence=ISS] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0003774 HOGENOM:HOG000230603 KO:K10411 EMBL:AL844507
HSSP:Q9XHH2 RefSeq:XP_001349300.1 ProteinModelPortal:Q8IB59
EnsemblProtists:MAL8P1.46:mRNA GeneID:2655387 KEGG:pfa:MAL8P1.46
EuPathDB:PlasmoDB:PF3D7_0822500 OMA:FQYPPIE ProtClustDB:CLSZ2432051
Uniprot:Q8IB59
Length = 199
Score = 116 (45.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 53/174 (30%), Positives = 86/174 (49%)
Query: 15 IPL-DLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDS 73
IPL + I +L+K ++L + +R+ + PM G + L L N I + L+
Sbjct: 38 IPLIEKLDNSINTLEKC--KRLSLSTNRIEKLIPMS-GLKNIEILSLGRNCIKKIQYLED 94
Query: 74 LVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNS 133
+ T+ L W LS+N I +D N+ + L++LY+ N+I+ + L +
Sbjct: 95 -ISGTL--KQL--W--LSYNYIDKLD-NL-QSLKKLQVLYIFHNKIKSIEEIDKLNTLPE 145
Query: 134 LRTLSLYGNPIE--KIREY-RAVVSTMIPQLVTLDSVFILPSEKQETNALNAEI 184
L L L GNPI K EY + ++ +PQL +D+ I +EKQ +AL EI
Sbjct: 146 LVELGLKGNPIYEGKTNEYMKLLILKKLPQLKIVDNETI--TEKQRNDALTFEI 197
>UNIPROTKB|Q8IB59 [details] [associations]
symbol:MAL8P1.46 "Outer arm dynein light chain 2, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003774 "motor
activity" evidence=ISS] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0003774 HOGENOM:HOG000230603 KO:K10411 EMBL:AL844507
HSSP:Q9XHH2 RefSeq:XP_001349300.1 ProteinModelPortal:Q8IB59
EnsemblProtists:MAL8P1.46:mRNA GeneID:2655387 KEGG:pfa:MAL8P1.46
EuPathDB:PlasmoDB:PF3D7_0822500 OMA:FQYPPIE ProtClustDB:CLSZ2432051
Uniprot:Q8IB59
Length = 199
Score = 116 (45.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 53/174 (30%), Positives = 86/174 (49%)
Query: 15 IPL-DLSFQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDS 73
IPL + I +L+K ++L + +R+ + PM G + L L N I + L+
Sbjct: 38 IPLIEKLDNSINTLEKC--KRLSLSTNRIEKLIPMS-GLKNIEILSLGRNCIKKIQYLED 94
Query: 74 LVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNS 133
+ T+ L W LS+N I +D N+ + L++LY+ N+I+ + L +
Sbjct: 95 -ISGTL--KQL--W--LSYNYIDKLD-NL-QSLKKLQVLYIFHNKIKSIEEIDKLNTLPE 145
Query: 134 LRTLSLYGNPIE--KIREY-RAVVSTMIPQLVTLDSVFILPSEKQETNALNAEI 184
L L L GNPI K EY + ++ +PQL +D+ I +EKQ +AL EI
Sbjct: 146 LVELGLKGNPIYEGKTNEYMKLLILKKLPQLKIVDNETI--TEKQRNDALTFEI 197
>DICTYBASE|DDB_G0284101 [details] [associations]
symbol:snrpA1 "U2 small nuclear ribonucleoprotein A'"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001611 PROSITE:PS51450
dictyBase:DDB_G0284101 GenomeReviews:CM000153_GR eggNOG:COG4886
EMBL:AAFI02000063 InterPro:IPR003603 SMART:SM00446 KO:K11092
OMA:KPTHILD RefSeq:XP_638751.1 ProteinModelPortal:Q54Q46 SMR:Q54Q46
STRING:Q54Q46 EnsemblProtists:DDB0233176 GeneID:8624421
KEGG:ddi:DDB_G0284101 InParanoid:Q54Q46 ProtClustDB:CLSZ2728949
Uniprot:Q54Q46
Length = 244
Score = 118 (46.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 29/105 (27%), Positives = 57/105 (54%)
Query: 90 LSFNN--IKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKI 147
L FNN IK+ +++ ++ P+L+ L L N+I + L +++ ++ +SL NP+ K
Sbjct: 68 LLFNNNHIKSFEEDFGSSLPHLRALILSNNRINNLSDLEPLTKLSEIKFISLLENPVSKK 127
Query: 148 REYRAVVSTMIPQLVTLDSVFILPSEKQETNALNAEIRSYLLPKY 192
YR + ++P L +D + E++E+ L + + +L KY
Sbjct: 128 PNYRLYLIHLVPHLKIIDFRKVKKIEREESKKLFGQSK-LILEKY 171
>ZFIN|ZDB-GENE-031114-4 [details] [associations]
symbol:dnaaf1 "dynein, axonemal, assembly factor 1"
species:7955 "Danio rerio" [GO:0003143 "embryonic heart tube
morphogenesis" evidence=IMP] [GO:0003146 "heart jogging"
evidence=IMP] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0035083
"cilium axoneme assembly" evidence=IMP] [GO:0042384 "cilium
assembly" evidence=IMP] [GO:0045502 "dynein binding" evidence=IMP]
[GO:0001539 "ciliary or flagellar motility" evidence=IMP]
[GO:0048793 "pronephros development" evidence=IMP] [GO:0035085
"cilium axoneme" evidence=ISS] [GO:0042995 "cell projection"
evidence=IEA] [GO:0005929 "cilium" evidence=IEA] [GO:0060027
"convergent extension involved in gastrulation" evidence=IMP]
[GO:0003305 "cell migration involved in heart jogging"
evidence=IMP] [GO:0003314 "heart rudiment morphogenesis"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-031114-4 GO:GO:0001947 GO:GO:0060027 GO:GO:0001539
GO:GO:0035083 GO:GO:0048793 GeneTree:ENSGT00670000097803
EMBL:CR376738 IPI:IPI00639781 Ensembl:ENSDART00000145762
ArrayExpress:F1Q654 Bgee:F1Q654 GO:GO:0003305 GO:GO:0003314
Uniprot:F1Q654
Length = 562
Score = 121 (47.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 36/120 (30%), Positives = 63/120 (52%)
Query: 57 SLWLSHNKISLVYGLDSLVHRTILDPDLIGWIDLSFNNIKNV-DKNMFTNFPNLKILYLH 115
+L +S+N I ++ + SL DL + +S N ++NV D ++ P++ +L L
Sbjct: 144 TLNVSNNYIKVIENISSL-------SDL-STLQISHNTLENVCDMEELSHCPSISVLDLS 195
Query: 116 KNQIEEYLSVFVLRRVNSLRTLSLYGNP-IEKIREYRAVVSTMIPQLVTLDSVFILPSEK 174
N+I + V +L ++ LR L+L GN I+KI YR + + QL LD + P ++
Sbjct: 196 HNRISDPALVNILEKMPDLRVLNLMGNEVIKKIPNYRKTLIVRLKQLTYLDDRPVFPKDR 255
>POMBASE|SPAC4A8.12c [details] [associations]
symbol:sds22 "protein phosphatase regulatory subunit
Sds22" species:4896 "Schizosaccharomyces pombe" [GO:0000070
"mitotic sister chromatid segregation" evidence=ISO] [GO:0000164
"protein phosphatase type 1 complex" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009966 "regulation of
signal transduction" evidence=IC] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0051457
"maintenance of protein location in nucleus" evidence=ISO]
[GO:0071862 "protein phosphatase type 1 activator activity"
evidence=IGI] InterPro:IPR001611 PROSITE:PS51450
PomBase:SPAC4A8.12c GO:GO:0005829 GO:GO:0005634 GO:GO:0009966
EMBL:CU329670 GO:GO:0051301 GenomeReviews:CU329670_GR GO:GO:0030071
eggNOG:COG4886 GO:GO:0000070 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 GO:GO:0051457 GO:GO:0000164
GO:GO:0071862 HOGENOM:HOG000211189 OMA:PQYRRKI EMBL:M57495
PIR:S43988 RefSeq:NP_593824.1 ProteinModelPortal:P22194
STRING:P22194 EnsemblFungi:SPAC4A8.12c.1 GeneID:2543597
KEGG:spo:SPAC4A8.12c OrthoDB:EOG4B01ZB NextBio:20804604
Uniprot:P22194
Length = 332
Score = 117 (46.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 40/158 (25%), Positives = 75/158 (47%)
Query: 21 FQQIQSLDKVAVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLDSLVHRTIL 80
F+ + L K+++ ++ N R+ + + + R L++SHN ++ G++ L + IL
Sbjct: 185 FENFEKLQKLSLLSIQSN--RITQFENLACLSHCLRELYVSHNGLTSFSGIEVLENLEIL 242
Query: 81 DPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVF-VLRRVNSLRTLSL 139
D +S N IK++ + NL L+ N++ + + L + L T+
Sbjct: 243 D--------VSNNMIKHL--SYLAGLKNLVELWASNNELSSFQEIEDELSGLKKLETVYF 292
Query: 140 YGNPIEKIRE--YRAVVSTMIPQLVTLDSVFILPSEKQ 175
GNP++K YR V +PQL +D+ I + KQ
Sbjct: 293 EGNPLQKTNPAVYRNKVRLCLPQLRQIDATIIPKTSKQ 330
>MGI|MGI:1921685 [details] [associations]
symbol:Lrriq3 "leucine-rich repeats and IQ motif containing
3" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001611
InterPro:IPR000048 PROSITE:PS50096 PROSITE:PS51450 SMART:SM00015
MGI:MGI:1921685 EMBL:AK015333 EMBL:AK015758 EMBL:AK016634
EMBL:BC112424 EMBL:BC113130 IPI:IPI00137079 IPI:IPI00137889
IPI:IPI00874867 RefSeq:NP_083214.2 UniGene:Mm.195711
ProteinModelPortal:Q14DL3 SMR:Q14DL3 PhosphoSite:Q14DL3
PRIDE:Q14DL3 Ensembl:ENSMUST00000029833 GeneID:74435 KEGG:mmu:74435
UCSC:uc008ruw.1 UCSC:uc008rux.1 CTD:127255 eggNOG:NOG296556
GeneTree:ENSGT00390000004404 HOGENOM:HOG000113383
HOVERGEN:HBG095683 InParanoid:Q14DL3 OMA:KYYTEQK OrthoDB:EOG4001HT
NextBio:340747 Bgee:Q14DL3 Genevestigator:Q14DL3 Uniprot:Q14DL3
Length = 633
Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
Identities = 37/122 (30%), Positives = 56/122 (45%)
Query: 88 IDLSFNNIKNV-DKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEK 146
+DL N IK + DKN ++ NLK+LYLH N + ++ VL SL L+++ P+
Sbjct: 77 LDLHGNQIKTLPDKNFWSGLKNLKLLYLHDNGFSKLKNICVLSGCVSLIGLTMFDCPVSL 136
Query: 147 IREYRAVVSTMIPQLVTLDSVFILPSEKQETNALNAEIRSYLLPKYEKLEAATFKRTAVS 206
+ YR V+ I L LD I E + L +++ + L A K T
Sbjct: 137 KKGYRHVLVNSIWPLKALDHHVISDEEIIQNWRLPERFKTFSPSLFFNLYPALIKGTTYE 196
Query: 207 VE 208
E
Sbjct: 197 DE 198
>UNIPROTKB|Q9WV82 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:10029
"Cricetulus griseus" [GO:0001875 "lipopolysaccharide receptor
activity" evidence=ISS] [GO:0032497 "detection of
lipopolysaccharide" evidence=ISS] [GO:0046696 "lipopolysaccharide
receptor complex" evidence=ISS] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR017241 InterPro:IPR027168
Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 GO:GO:0005622
InterPro:IPR025875 Pfam:PF12799 GO:GO:0004888 GO:GO:0046696
SUPFAM:SSF52200 GO:GO:0001875 GO:GO:0032497 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 CTD:7099 EMBL:AF153676 RefSeq:NP_001233691.1
ProteinModelPortal:Q9WV82 SMR:Q9WV82 GeneID:100689329
Uniprot:Q9WV82
Length = 838
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 40/120 (33%), Positives = 65/120 (54%)
Query: 82 PDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYG 141
P + +DLSFN +K + + F NFP LK+L L + +IE + + ++ L TL L G
Sbjct: 52 PSSVKHLDLSFNPLKTLGSHSFFNFPELKLLDLSRCEIET-IEDKAYQGLHQLTTLILTG 110
Query: 142 NPIEKIREYR----AVVSTMIP---QLVTLDSVFI--LPSEKQETNALNAEIRSYLLPKY 192
NPI+ + + A + ++ +L +LDS+ I L + K+ A N I S+ LP+Y
Sbjct: 111 NPIQNLSKGTFSGLANLQNLVAVEIKLASLDSLPIGHLVTLKKLNVAHNL-IHSFKLPEY 169
>UNIPROTKB|I3LT68 [details] [associations]
symbol:LOC100620561 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050829 "defense response to Gram-negative
bacterium" evidence=IEA] [GO:0050707 "regulation of cytokine
secretion" evidence=IEA] [GO:0046696 "lipopolysaccharide receptor
complex" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0042116 "macrophage activation" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0001875 "lipopolysaccharide
receptor activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR027168 PROSITE:PS51450 InterPro:IPR000483 SMART:SM00082
GeneTree:ENSGT00700000104185 PANTHER:PTHR24365:SF9
Ensembl:ENSSSCT00000029553 Uniprot:I3LT68
Length = 653
Score = 117 (46.2 bits), Expect = 0.00022, P = 0.00022
Identities = 35/119 (29%), Positives = 61/119 (51%)
Query: 82 PDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYG 141
P + +DLSFN + ++D N F++FP L++L L + +I+ + + +N L TL L G
Sbjct: 53 PTSVKILDLSFNYLSHLDSNSFSSFPELQVLDLSRCEIQT-IDDDAYQGLNYLSTLILTG 111
Query: 142 NPIEKIR--EYRAVVST--MIPQLVTLDSVFILP----SEKQETNALNAEIRSYLLPKY 192
NPI+ + + + S ++ L S+ P +E N + I S+ LP+Y
Sbjct: 112 NPIQSLALGAFSGLPSLQKLVAVETNLASLEDFPIGHLKTLKELNVAHNHIHSFKLPEY 170
>UNIPROTKB|Q68Y56 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9823 "Sus
scrofa" [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0006954 "inflammatory response" evidence=IEA] [GO:0050829
"defense response to Gram-negative bacterium" evidence=IEA]
[GO:0050707 "regulation of cytokine secretion" evidence=IEA]
[GO:0042116 "macrophage activation" evidence=IEA] [GO:0034142
"toll-like receptor 4 signaling pathway" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0006954 InterPro:IPR000483 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0004888 GO:GO:0046696 SUPFAM:SSF52200
GO:GO:0001875 GO:GO:0032497 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 eggNOG:NOG249751 HOGENOM:HOG000037951
OrthoDB:EOG4P8FHQ EMBL:AB188301 UniGene:Ssc.19703
ProteinModelPortal:Q68Y56 SMR:Q68Y56 STRING:Q68Y56 Uniprot:Q68Y56
Length = 841
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 37/119 (31%), Positives = 62/119 (52%)
Query: 82 PDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYG 141
P + +DLSFN + ++D N F++FP L++L L + +I+ + + +N L TL L G
Sbjct: 53 PTSVKILDLSFNYLSHLDSNSFSSFPELQVLDLSRCEIQT-IDDDAYQGLNYLSTLILTG 111
Query: 142 NPIEKIR--EYRAVVST--MIPQLVTLDSVFILPSEKQET-NALNA---EIRSYLLPKY 192
NPI+ + + + S ++ L S+ P +T N LN I S+ LP+Y
Sbjct: 112 NPIQSLALGAFSGLPSLQKLVAVETNLASLEDFPIGHLKTLNELNVAHNHIHSFKLPEY 170
>UNIPROTKB|Q9MYW3 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9796 "Equus
caballus" [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0042116 "macrophage activation" evidence=ISS]
[GO:0046696 "lipopolysaccharide receptor complex" evidence=ISS]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR017241
InterPro:IPR027168 Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0006954 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0042116 GO:GO:0004888 GO:GO:0046696
SUPFAM:SSF52200 GO:GO:0001875 GO:GO:0032497 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 CTD:7099 eggNOG:NOG249751
HOGENOM:HOG000037951 KO:K10160 OrthoDB:EOG4P8FHQ EMBL:AY005808
RefSeq:NP_001093239.1 UniGene:Eca.2625 ProteinModelPortal:Q9MYW3
SMR:Q9MYW3 STRING:Q9MYW3 GeneID:100066890 KEGG:ecb:100066890
InParanoid:Q9MYW3 Uniprot:Q9MYW3
Length = 843
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 36/113 (31%), Positives = 58/113 (51%)
Query: 88 IDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKI 147
+DLSFN +K + + F+NFP L++L L + +IE + + +N L TL L GNPI +
Sbjct: 59 LDLSFNPLKELGSHSFSNFPELQVLDLSRCEIE-MIEDDAYQGLNHLSTLILTGNPIRSL 117
Query: 148 R--EYRAVVS--TMIPQLVTLDSVFILP----SEKQETNALNAEIRSYLLPKY 192
+ + S T++ L S+ P +E N + I S+ LP+Y
Sbjct: 118 ALGAFSGLSSLQTLVAVETKLSSLEKFPIGHLKTLKELNVAHNLIHSFKLPEY 170
>UNIPROTKB|F1PDB9 [details] [associations]
symbol:TLR4 "Toll-like receptor" species:9615 "Canis lupus
familiaris" [GO:0045087 "innate immune response" evidence=IEA]
[GO:0006954 "inflammatory response" evidence=IEA] [GO:0050829
"defense response to Gram-negative bacterium" evidence=IEA]
[GO:0050707 "regulation of cytokine secretion" evidence=IEA]
[GO:0046696 "lipopolysaccharide receptor complex" evidence=IEA]
[GO:0042116 "macrophage activation" evidence=IEA] [GO:0034142
"toll-like receptor 4 signaling pathway" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0001875 "lipopolysaccharide receptor activity"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0006954 InterPro:IPR000483 SMART:SM00082
GO:GO:0045087 GO:GO:0005622 InterPro:IPR025875 Pfam:PF12799
GO:GO:0004888 GeneTree:ENSGT00700000104185 SUPFAM:SSF52200
PANTHER:PTHR24365:SF9 CTD:7099 KO:K10160 OMA:PESWDPC
EMBL:AAEX03008139 RefSeq:NP_001002950.2 Ensembl:ENSCAFT00000005653
GeneID:403417 KEGG:cfa:403417 Uniprot:F1PDB9
Length = 833
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 34/113 (30%), Positives = 61/113 (53%)
Query: 88 IDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKI 147
+DLSFN ++++ + F+NFP L++L L + +I+ + + +N L L L GNPI+++
Sbjct: 59 LDLSFNPLRHLGSHCFSNFPKLQVLDLSRCEIQ-VIEDDAYQGLNHLSILILTGNPIQRL 117
Query: 148 --REYRAVVS--TMIPQLVTLDSVFILP----SEKQETNALNAEIRSYLLPKY 192
R + + S T++ + L S+ P +E N + I S+ LP Y
Sbjct: 118 FPRAFSGLSSLKTLVAKETKLTSLEDFPIGHLKTLKELNVAHNLIHSFKLPAY 170
>UNIPROTKB|F1SMI0 [details] [associations]
symbol:TLR4 "Toll-like receptor" species:9823 "Sus scrofa"
[GO:0045087 "innate immune response" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0050829 "defense response
to Gram-negative bacterium" evidence=IEA] [GO:0050707 "regulation
of cytokine secretion" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=IEA] [GO:0042116
"macrophage activation" evidence=IEA] [GO:0034142 "toll-like
receptor 4 signaling pathway" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0001875 "lipopolysaccharide receptor activity"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0006954 InterPro:IPR000483 SMART:SM00082
GO:GO:0045087 GO:GO:0005622 GO:GO:0004888
GeneTree:ENSGT00700000104185 SUPFAM:SSF52200 PANTHER:PTHR24365:SF9
EMBL:CR938718 Ensembl:ENSSSCT00000006051 OMA:RNATCQI
ArrayExpress:F1SMI0 Uniprot:F1SMI0
Length = 841
Score = 117 (46.2 bits), Expect = 0.00031, P = 0.00031
Identities = 35/119 (29%), Positives = 61/119 (51%)
Query: 82 PDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYG 141
P + +DLSFN + ++D N F++FP L++L L + +I+ + + +N L TL L G
Sbjct: 53 PTSVKILDLSFNYLSHLDSNSFSSFPELQVLDLSRCEIQT-IDDDAYQGLNYLSTLILTG 111
Query: 142 NPIEKIR--EYRAVVST--MIPQLVTLDSVFILP----SEKQETNALNAEIRSYLLPKY 192
NPI+ + + + S ++ L S+ P +E N + I S+ LP+Y
Sbjct: 112 NPIQSLALGAFSGLPSLQKLVAVETNLASLEDFPIGHLKTLKELNVAHNHIHSFKLPEY 170
>UNIPROTKB|E1BVG6 [details] [associations]
symbol:LRRC48 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005737 InterPro:IPR025875
Pfam:PF12799 OMA:DKFVIIC GeneTree:ENSGT00670000097777
EMBL:AADN02023718 IPI:IPI00582477 Ensembl:ENSGALT00000007861
Uniprot:E1BVG6
Length = 525
Score = 114 (45.2 bits), Expect = 0.00037, P = 0.00037
Identities = 56/186 (30%), Positives = 88/186 (47%)
Query: 17 LDLSFQQIQSLDKV----AVQKLKPNVHRLGESPPMLVGRYDTRSLWLSHNKISLVYGLD 72
L LSF+ I +D + + KL+ + + + E L L LS N I ++ GLD
Sbjct: 47 LQLSFRNILQIDNLWQFENLTKLQLD-NNIIEKIEALESLVHLVWLDLSFNNIEVIEGLD 105
Query: 73 SLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVN 132
+LV + D + L N I ++ +M T L+I + KN + +V LR+
Sbjct: 106 TLVK--LQD------LSLYNNRISKIE-HMDT-LQELQIFSIGKNNLTTLENVVYLRKFK 155
Query: 133 SLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQETNAL-NAEIRSYLLPK 191
+L TL+L GNP +Y V +P LV LD F L S+ A+ N + LL +
Sbjct: 156 NLHTLNLTGNPFCNEEQYMLFVVAHLPGLVYLD--FKLVSDTTREVAISNYHYLTDLL-E 212
Query: 192 YEKLEA 197
+E+ +A
Sbjct: 213 HEEAQA 218
>ZFIN|ZDB-GENE-040426-2448 [details] [associations]
symbol:anp32e "acidic (leucine-rich) nuclear
phosphoprotein 32 family, member E" species:7955 "Danio rerio"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-040426-2448 GO:GO:0005634 GO:GO:0005737
eggNOG:NOG322008 GeneTree:ENSGT00560000077130 InterPro:IPR003603
SMART:SM00446 HOVERGEN:HBG053102 CTD:81611 EMBL:BC056543
EMBL:BC068403 EMBL:BC098881 IPI:IPI00500537 RefSeq:NP_998442.1
UniGene:Dr.33193 ProteinModelPortal:Q6NUW5 SMR:Q6NUW5 PRIDE:Q6NUW5
Ensembl:ENSDART00000077059 Ensembl:ENSDART00000126393 GeneID:406562
KEGG:dre:406562 InParanoid:Q6NUW5 OMA:RCVNGEI OrthoDB:EOG4HMJBK
NextBio:20818122 ArrayExpress:Q6NUW5 Bgee:Q6NUW5 Uniprot:Q6NUW5
Length = 250
Score = 109 (43.4 bits), Expect = 0.00039, P = 0.00039
Identities = 34/116 (29%), Positives = 59/116 (50%)
Query: 65 ISLV-YGLDSLVHRTILDPDLIGWIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYL 123
+S+V GL SL L P L ++LS NNI + + NL L L N+I+E
Sbjct: 47 LSMVNVGLTSLAKLPSL-PKLRK-LELSDNNISGTLETLAEKCANLTYLNLSGNKIKELS 104
Query: 124 SVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQETNA 179
++ L+ + +L++L L+ I + +YR + ++PQ+ LD +E ++ A
Sbjct: 105 TLEALQNLKNLKSLDLFNCEITTLEDYRESIFELLPQVTYLDGFDAEDNEAPDSEA 160
>FB|FBgn0014395 [details] [associations]
symbol:tilB "touch insensitive larva B" species:7227
"Drosophila melanogaster" [GO:0007605 "sensory perception of sound"
evidence=IMP] [GO:0045433 "male courtship behavior, veined wing
generated song production" evidence=IMP] [GO:0010378 "temperature
compensation of the circadian clock" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0035083 "cilium axoneme assembly"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005737
GO:GO:0019861 GO:GO:0030425 EMBL:AE014298 GO:GO:0007605
GO:GO:0031514 InterPro:IPR003603 SMART:SM00446 GO:GO:0045433
PROSITE:PS51203 GO:GO:0060285 GO:GO:0060286 GO:GO:0035083
GO:GO:0010378 GeneTree:ENSGT00590000083127 OMA:DFDGYRQ
RefSeq:NP_608460.1 HSSP:Q9XHH2 ProteinModelPortal:Q9VR52 SMR:Q9VR52
IntAct:Q9VR52 MINT:MINT-1571663 STRING:Q9VR52
EnsemblMetazoa:FBtr0077345 GeneID:33130 KEGG:dme:Dmel_CG14620
UCSC:CG14620-RA CTD:33130 FlyBase:FBgn0014395 InParanoid:Q9VR52
PhylomeDB:Q9VR52 GenomeRNAi:33130 NextBio:782055 Bgee:Q9VR52
Uniprot:Q9VR52
Length = 395
Score = 111 (44.1 bits), Expect = 0.00055, P = 0.00055
Identities = 37/105 (35%), Positives = 54/105 (51%)
Query: 87 WIDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEK 146
+++++ NNI+ V+ N+ +L L L N I E SV L +LR L L GNP
Sbjct: 70 YLNVAINNIERVE-NL-EGCESLSKLDLTLNFIRELTSVESLCGNYNLRELVLIGNPCVD 127
Query: 147 IREYRAVVSTMIPQLVTLDSVFILPSEKQETNALNAEIRSYLLPK 191
YR V +PQL +LD V I PSE+ ++ RS ++ K
Sbjct: 128 YPHYRDYVVATLPQLNSLDCVEITPSERLRALRELSKNRSIIVQK 172
>ZFIN|ZDB-GENE-030131-7850 [details] [associations]
symbol:anp32a "acidic (leucine-rich) nuclear
phosphoprotein 32 family, member A" species:7955 "Danio rerio"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISS] [GO:0006913 "nucleocytoplasmic
transport" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-030131-7850
GeneTree:ENSGT00560000077130 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 EMBL:BX914196 IPI:IPI00932297
Ensembl:ENSDART00000114041 ArrayExpress:F1QTN7 Bgee:F1QTN7
Uniprot:F1QTN7
Length = 263
Score = 107 (42.7 bits), Expect = 0.00076, P = 0.00076
Identities = 27/101 (26%), Positives = 55/101 (54%)
Query: 88 IDLSFNNIKNVDKNMFTNFPNLKILYLHKNQIEEYLSVFVLRRVNSLRTLSLYGNPIEKI 147
++LS N I + + PNL L L N+I++ ++ L+++ SL++L L+ + +
Sbjct: 78 LELSDNRISGGLEVLAGKCPNLTHLNLSGNKIKDLSTIEPLKKLESLKSLDLFNCEVTNL 137
Query: 148 REYRAVVSTMIPQLVTLDSVFILPSEKQETNALNAEIRSYL 188
+YR V ++PQL LD +K++ A +++ +Y+
Sbjct: 138 NDYRENVFKLLPQLTYLDGY-----DKEDKEAPDSDAEAYV 173
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 210 210 0.00080 112 3 11 22 0.37 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 575 (61 KB)
Total size of DFA: 154 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 19.24u 0.07s 19.31t Elapsed: 00:00:21
Total cpu time: 19.24u 0.07s 19.31t Elapsed: 00:00:27
Start: Thu Aug 15 13:07:36 2013 End: Thu Aug 15 13:08:03 2013