BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4163
(85 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P34714|SPRC_CAEEL SPARC OS=Caenorhabditis elegans GN=ost-1 PE=1 SV=1
Length = 264
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%)
Query: 21 RSVSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIEDQC 77
+SVS HEL PI A + +E CI PFL CDA++D I++KEW +CL L E EI+++C
Sbjct: 208 KSVSHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264
>sp|P23499|SPRL1_COTJA SPARC-like protein 1 OS=Coturnix coturnix japonica GN=SPARCL1 PE=2
SV=1
Length = 676
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 17 QH-VGRSVSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIED 75
QH V RS++ EL P+RA+ + +EHCI F +CD D D LITLKEW C + E++I +
Sbjct: 613 QHPVDRSLTHSELAPLRASLVPMEHCITRFFQECDGDQDKLITLKEWCHCFAIKEEDINE 672
>sp|P24054|SPRL1_RAT SPARC-like protein 1 OS=Rattus norvegicus GN=Sparcl1 PE=2 SV=1
Length = 634
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 21 RSVSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIED 75
R ++ EL P+RA+ + +EHCI F +CD + D ITLKEW C + E++I++
Sbjct: 576 RILTHSELAPLRASLVPMEHCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDE 630
>sp|P70663|SPRL1_MOUSE SPARC-like protein 1 OS=Mus musculus GN=Sparcl1 PE=1 SV=3
Length = 650
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 21 RSVSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIED 75
R ++ EL P+RA+ + +EHCI F +CD + D ITLKEW C + E++I++
Sbjct: 592 RILTHSELAPLRASLVPMEHCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDE 646
>sp|Q14515|SPRL1_HUMAN SPARC-like protein 1 OS=Homo sapiens GN=SPARCL1 PE=1 SV=2
Length = 664
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 21 RSVSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIED 75
R ++ EL P+RA+ + +EHCI F +CD + D ITLKEW C + E++I++
Sbjct: 606 RVLTHSELAPLRASLVPMEHCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDE 660
>sp|P36378|SPRC_XENLA SPARC OS=Xenopus laevis GN=sparc PE=1 SV=1
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 17 QH-VGRSVSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 74
QH + +S EL P+RA + +EHC F ++CD DDD I L+EWA+C + E +++
Sbjct: 237 QHPIDGYLSHTELSPLRAPLIPMEHCTTRFFDECDIDDDKYIALEEWAKCFGIKEQDVD 295
>sp|O93390|SPRC_COTJA SPARC OS=Coturnix coturnix japonica GN=SPARC PE=2 SV=1
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 QH-VGRSVSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 74
QH + +S EL P+RA + +EHC F CD D+D I L+EWA C + E +I+
Sbjct: 235 QHPIDGYLSHTELAPLRAPLIPMEHCTTRFFEACDLDNDKYIALEEWASCFGIKEKDID 293
>sp|P16975|SPRC_RAT SPARC OS=Rattus norvegicus GN=Sparc PE=1 SV=4
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 23 VSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEI 73
+S EL P+RA + +EHC F CD D+D I L+EWA C + E +I
Sbjct: 245 LSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALEEWAGCFGIKEQDI 295
>sp|P07214|SPRC_MOUSE SPARC OS=Mus musculus GN=Sparc PE=1 SV=1
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 23 VSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEI 73
+S EL P+RA + +EHC F CD D+D I L+EWA C + E +I
Sbjct: 246 LSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALEEWAGCFGIKEQDI 296
>sp|P20112|SPRC_PIG SPARC OS=Sus scrofa GN=SPARC PE=1 SV=2
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 23 VSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 74
+S EL P+RA + +EHC F CD D+D I L EWA C + E +I+
Sbjct: 244 LSHTELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDID 295
>sp|P13213|SPRC_BOVIN SPARC OS=Bos taurus GN=SPARC PE=1 SV=2
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 QH-VGRSVSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 74
QH + +S EL P+RA + +EHC F CD D+D I L EWA C + E +I+
Sbjct: 240 QHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKEKDID 298
>sp|P36377|SPRC_CHICK SPARC OS=Gallus gallus GN=SPARC PE=2 SV=1
Length = 298
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 QH-VGRSVSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 74
QH + +S EL P+RA + +EHC F CD D D I L+EWA C + E +I+
Sbjct: 235 QHPIDGYLSHTELAPLRAPLIPMEHCTTRFFEACDLDFDKYIALEEWASCFGIKEQDID 293
>sp|Q5R767|SPRC_PONAB SPARC OS=Pongo abelii GN=SPARC PE=2 SV=1
Length = 303
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 23 VSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 74
+S EL P+RA + +EHC F CD D+D I L EWA C + + +I+
Sbjct: 247 LSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDID 298
>sp|P09486|SPRC_HUMAN SPARC OS=Homo sapiens GN=SPARC PE=1 SV=1
Length = 303
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 23 VSRHELFPIRANFMALEHCIAPFLNKCDADDDHLITLKEWARCLELNEDEIE 74
+S EL P+RA + +EHC F CD D+D I L EWA C + + +I+
Sbjct: 247 LSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDID 298
>sp|Q9BQ16|TICN3_HUMAN Testican-3 OS=Homo sapiens GN=SPOCK3 PE=1 SV=2
Length = 436
Score = 33.9 bits (76), Expect = 0.30, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 39 EHCIAPFLNKCDADDDHLITLKEWARCLELNED 71
E C F N CD D LI+ EW C + +D
Sbjct: 282 EQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQD 314
>sp|Q8BKV0|TICN3_MOUSE Testican-3 OS=Mus musculus GN=Spock3 PE=2 SV=2
Length = 436
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 39 EHCIAPFLNKCDADDDHLITLKEWARCLELNED 71
E C F N CD D LI+ EW C + +D
Sbjct: 282 EQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQD 314
>sp|Q5RD69|TICN3_PONAB Testican-3 OS=Pongo abelii GN=SPOCK3 PE=2 SV=2
Length = 436
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 39 EHCIAPFLNKCDADDDHLITLKEWARCLELNED 71
E C F N CD D LI+ EW C + +D
Sbjct: 282 EQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQD 314
>sp|Q92563|TICN2_HUMAN Testican-2 OS=Homo sapiens GN=SPOCK2 PE=1 SV=1
Length = 424
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 34 NFMALEHCIAPFLNKCDADDDHLITLKEWARCL 66
N E CI PF N CD D ++ EW C
Sbjct: 274 NLDKYEVCIRPFFNSCDTYKDGRVSTAEWCFCF 306
>sp|Q9ER58|TICN2_MOUSE Testican-2 OS=Mus musculus GN=Spock2 PE=2 SV=1
Length = 423
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 34 NFMALEHCIAPFLNKCDADDDHLITLKEWARCL 66
N E CI PF N CD D ++ EW C
Sbjct: 273 NLDKYEVCIRPFFNSCDTYKDGRVSTAEWCFCF 305
>sp|Q08629|TICN1_HUMAN Testican-1 OS=Homo sapiens GN=SPOCK1 PE=1 SV=1
Length = 439
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 39 EHCIAPFLNKCDADDDHLITLKEWARCLE 67
E CI P N CD+ D ++ EW C +
Sbjct: 278 EPCIKPLFNSCDSFKDGKLSNNEWCYCFQ 306
>sp|Q62288|TICN1_MOUSE Testican-1 OS=Mus musculus GN=Spock1 PE=2 SV=2
Length = 442
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 39 EHCIAPFLNKCDADDDHLITLKEWARCLE 67
E CI P N CD+ D ++ EW C +
Sbjct: 281 EPCIKPLFNSCDSFKDGKLSNNEWCYCFQ 309
>sp|P79387|STF1_PIG Steroidogenic factor 1 OS=Sus scrofa GN=NR5A1 PE=2 SV=3
Length = 461
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 43 APFLNKCDADDDHLITLKEWA-RCLELNEDEIEDQCEDVRN 82
APF C D I++ +WA RC+ E E+ DQ ++N
Sbjct: 260 APFSLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQN 300
>sp|Q95L87|STF1_MACEU Steroidogenic factor 1 OS=Macropus eugenii GN=NR5A1 PE=2 SV=1
Length = 463
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 44 PFLNKCDADDDHLITLKEWAR-CLELNEDEIEDQCEDVRN 82
PF C D L ++ EWAR C+ E E+ DQ + ++N
Sbjct: 263 PFGLMCKMADQTLFSIVEWARSCVVFKELEVADQMKLLQN 302
>sp|P50569|STF1_RAT Steroidogenic factor 1 OS=Rattus norvegicus GN=Nr5a1 PE=2 SV=1
Length = 462
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 43 APFLNKCDADDDHLITLKEWA-RCLELNEDEIEDQCEDVRN 82
APF C D I++ +WA RC+ E E+ DQ ++N
Sbjct: 261 APFSLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQN 301
>sp|P33242|STF1_MOUSE Steroidogenic factor 1 OS=Mus musculus GN=Nr5a1 PE=1 SV=3
Length = 462
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 43 APFLNKCDADDDHLITLKEWA-RCLELNEDEIEDQCEDVRN 82
APF C D I++ +WA RC+ E E+ DQ ++N
Sbjct: 261 APFSLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQN 301
>sp|Q04752|STF1_BOVIN Steroidogenic factor 1 OS=Bos taurus GN=NR5A1 PE=1 SV=1
Length = 461
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 43 APFLNKCDADDDHLITLKEWA-RCLELNEDEIEDQCEDVRN 82
APF C D I++ +WA RC+ E E+ DQ ++N
Sbjct: 260 APFSLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQN 300
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,188,888
Number of Sequences: 539616
Number of extensions: 1127073
Number of successful extensions: 3209
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3182
Number of HSP's gapped (non-prelim): 33
length of query: 85
length of database: 191,569,459
effective HSP length: 56
effective length of query: 29
effective length of database: 161,350,963
effective search space: 4679177927
effective search space used: 4679177927
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)