BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4164
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P83877|TXN4A_MOUSE Thioredoxin-like protein 4A OS=Mus musculus GN=Txnl4a PE=2 SV=1
Length = 142
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDRVV+
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVV 27
>sp|P83876|TXN4A_HUMAN Thioredoxin-like protein 4A OS=Homo sapiens GN=TXNL4A PE=1 SV=1
Length = 142
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDRVV+
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVV 27
>sp|P87215|DIMI_SCHPO Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=dim1 PE=1 SV=1
Length = 142
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSY L HLH+GW VDQAILSE++R+V+
Sbjct: 1 MSYFLPHLHSGWHVDQAILSEQERLVV 27
>sp|Q4R6X9|LRC48_MACFA Leucine-rich repeat-containing protein 48 OS=Macaca fascicularis
GN=LRRC48 PE=2 SV=1
Length = 523
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 73
I+ +++ LRR LRTLSL GNPI + +Y+ + +P LV LD
Sbjct: 143 IDNMMNIVYLRRFQCLRTLSLSGNPISEAEDYKMFICAYLPDLVYLD 189
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 18/80 (22%)
Query: 41 SLRTLSLYGNPIEKIREYRAVVSTMI-----PQLVTLDSVLY-------------GNPIE 82
+L LSL+ N I KI A+V + Q+ + +++Y GNPI
Sbjct: 110 NLEDLSLFNNRISKIDSLDALVKLQVLSLGNNQIDNMMNIVYLRRFQCLRTLSLSGNPIS 169
Query: 83 KIREYRAVVSTMIPQLVTLD 102
+ +Y+ + +P LV LD
Sbjct: 170 EAEDYKMFICAYLPDLVYLD 189
>sp|Q5EAD8|LRC51_BOVIN Leucine-rich repeat-containing protein 51 OS=Bos taurus GN=LRRC51
PE=2 SV=1
Length = 192
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRA 60
+S +L H N +D LS D I+ L+ F +L L L+GN I+++ E
Sbjct: 71 VSQLLEHPENLAWID---LSFNDLTSIDPVLTTFF-----NLSVLYLHGNSIQRLGEVNK 122
Query: 61 VVSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLD 102
+ + +P+L +L L+GNPIE+ + YR V +P + T D
Sbjct: 123 LAA--LPRLRSL--TLHGNPIEEEKGYRQYVLCTLPHITTFD 160
>sp|B6CZ61|LRC51_RAT Leucine-rich repeat-containing protein 51 OS=Rattus norvegicus
GN=Lrrc51 PE=2 SV=1
Length = 192
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRA 60
+S +L H N +D LS D I+ L+ F +L L L+GN I ++ E
Sbjct: 71 VSQLLQHPENLAWID---LSFNDLTTIDPVLTTFF-----NLSVLYLHGNSIHRLGEVNK 122
Query: 61 VVSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLD 102
+ ++P+L +L L+GNPIE+ + YR V +P++ T D
Sbjct: 123 LA--VLPRLRSL--TLHGNPIEEEKGYRQYVLCNLPRITTFD 160
>sp|Q9DAK8|LRC51_MOUSE Leucine-rich repeat-containing protein 51 OS=Mus musculus GN=Lrrc51
PE=2 SV=1
Length = 192
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRA 60
+S +L H N +D LS D I+ L+ F +L L L+GN I ++ E
Sbjct: 71 VSQLLQHPENLAWID---LSFNDLTTIDPVLTTFF-----NLSVLYLHGNGIHRLGEVNK 122
Query: 61 VVSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLD 102
+ ++P+L +L L+GNPIE+ + YR V +P++ T D
Sbjct: 123 LA--VLPRLRSL--TLHGNPIEEEKGYRQYVLCNLPRITTFD 160
>sp|B6CZ54|LRC51_PROCO Leucine-rich repeat-containing protein 51 OS=Propithecus coquereli
GN=LRTOMT PE=2 SV=1
Length = 192
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 2 SYMLGHLHNGWQVDQAILSEEDRVVIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAV 61
S +L H N +D LS D I+ L+ F +L L L+GN I+ + E +
Sbjct: 72 SQLLEHPENLAWID---LSFNDLTSIDPVLTTFF-----NLSVLYLHGNSIQHLGEVNKL 123
Query: 62 VSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLD 102
++P+L +L L+GNP+E+ + YR V +P + T D
Sbjct: 124 A--VLPRLRSL--TLHGNPMEEEKGYRQYVLCTLPHITTFD 160
>sp|B6CZ45|LRC51_MACMU Leucine-rich repeat-containing protein 51 OS=Macaca mulatta
GN=LRTOMT PE=2 SV=1
Length = 192
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 2 SYMLGHLHNGWQVDQAILSEEDRVVIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAV 61
S +L H N +D LS D I+ L+ F +L L L+GN I+ + E +
Sbjct: 72 SQLLEHPENLAWID---LSFNDLTSIDPVLTTFF-----NLSVLYLHGNSIQHLGEVNKL 123
Query: 62 VSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLD 102
++P+L +L L+GNP+E+ + YR V +P + T D
Sbjct: 124 A--VLPRLRSL--TLHGNPMEEEKGYRQYVLCTLPHITTFD 160
>sp|Q75BD8|DIB1_ASHGO Spliceosomal protein DIB1 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DIB1 PE=3 SV=1
Length = 143
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 2 SYMLGHLHNGWQVDQAILSEEDRVVIEEYLS 32
S L HLH+GW VDQAI++EE+R+V+ + S
Sbjct: 3 SVFLPHLHSGWHVDQAIVTEEERLVVIRFGS 33
>sp|Q5XI54|LRC48_RAT Leucine-rich repeat-containing protein 48 OS=Rattus norvegicus
GN=Lrrc48 PE=2 SV=1
Length = 523
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 36 LRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 73
LRR LRTLSL GNP+ + EY+ + +P LV LD
Sbjct: 152 LRRFPCLRTLSLSGNPVSEAEEYKVFIYAYLPDLVYLD 189
>sp|B6CZ40|LRC51_PANTR Leucine-rich repeat-containing protein 51 OS=Pan troglodytes
GN=LRTOMT PE=2 SV=1
Length = 192
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 2 SYMLGHLHNGWQVDQAILSEEDRVVIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAV 61
S +L H N +D LS D I+ L+ F +L L L+GN I+++ E +
Sbjct: 72 SQLLEHPENLAWID---LSFNDLTSIDPVLTTFF-----NLSVLYLHGNSIQRLGEVNKL 123
Query: 62 VSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEK 111
++P+L +L L+GNP+E+ + YR V + ++ T D + +++
Sbjct: 124 A--VLPRLRSL--TLHGNPMEEEKGYRQYVLCTLSRITTFDFAGVTKADR 169
>sp|Q9D5E4|LRC48_MOUSE Leucine-rich repeat-containing protein 48 OS=Mus musculus GN=Lrrc48
PE=2 SV=1
Length = 523
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 27 IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLD 73
I +++ LRR LRTLSL GNP+ + EY+ + + LV LD
Sbjct: 143 ISNMMNIIYLRRFPCLRTLSLAGNPVSEAEEYKMFIYAYLSDLVYLD 189
>sp|Q9H069|LRC48_HUMAN Leucine-rich repeat-containing protein 48 OS=Homo sapiens GN=LRRC48
PE=2 SV=2
Length = 523
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 27 IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIEKIRE 86
I+ +++ LRR LRTLSL NPI + +Y+ + +P L+ LD + +K+ E
Sbjct: 143 IDNMMNIIYLRRFKCLRTLSLSRNPISEAEDYKMFICAYLPDLMYLDYRRIDDHTKKLAE 202
Query: 87 YR 88
+
Sbjct: 203 AK 204
>sp|Q96E66|LRC51_HUMAN Leucine-rich repeat-containing protein 51 OS=Homo sapiens GN=LRTOMT
PE=2 SV=1
Length = 192
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 2 SYMLGHLHNGWQVDQAILSEEDRVVIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAV 61
S +L H N +D LS D I+ L+ F +L L L+GN I+++ E +
Sbjct: 72 SQLLEHPENLAWID---LSFNDLTSIDPVLTTFF-----NLSVLYLHGNSIQRLGEVNKL 123
Query: 62 VSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLD 102
++P+L +L L+GNP+E+ + YR V + ++ T D
Sbjct: 124 A--VLPRLRSL--TLHGNPMEEEKGYRQYVLCTLSRITTFD 160
>sp|B3DH20|TILB_DANRE Protein TILB homolog OS=Danio rerio GN=lrrc6 PE=1 SV=1
Length = 440
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 32 SVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDS--VLYGNPIEKIREYRA 89
SV L+ L+ L L GNP + + YR V +PQL +LD + I+ ++E A
Sbjct: 105 SVETLKHNLHLKELYLVGNPCAEYQGYRQYVVATVPQLQSLDGKEISRAERIQALQELDA 164
Query: 90 VVSTMIPQLVTLDSVFILPSEKQETNA 116
V + ++ Q ++ ++ EKQ++NA
Sbjct: 165 VRTRVLQQ----ETKYLEEREKQKSNA 187
>sp|Q6FMI2|DIB1_CANGA Spliceosomal protein DIB1 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DIB1
PE=3 SV=1
Length = 142
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 21/23 (91%)
Query: 5 LGHLHNGWQVDQAILSEEDRVVI 27
L +LH+GW VDQAI++EE+R+V+
Sbjct: 4 LYNLHSGWHVDQAIVTEEERLVV 26
>sp|Q5Y2C3|H2AY_TETTS Histone H2A.Y OS=Tetrahymena thermophila (strain SB210) GN=HTAY
PE=2 SV=2
Length = 388
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 36 LRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMI 95
LR L+TL L N IE+I + + + + +L+ LD L NP+ YR +V +
Sbjct: 95 LRGSRHLQTLMLGANQIEEIEDLKRL--GQMRELIQLD--LLNNPVVNTNNYRNLVFNLF 150
Query: 96 PQLVTLDSV 104
P LV LD++
Sbjct: 151 PSLVILDTL 159
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 36 LRRVNSLR---TLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIEKIREYRAVVS 92
L+R+ +R L L NP+ YR +V + P LV LD+ L N I++ + + +
Sbjct: 117 LKRLGQMRELIQLDLLNNPVVNTNNYRNLVFNLFPSLVILDT-LDKNGIDQEKAALDISA 175
Query: 93 TMIP 96
+ +P
Sbjct: 176 SRVP 179
>sp|Q5A449|RU2A_CANAL U2 small nuclear ribonucleoprotein A' OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=LEA1 PE=3 SV=1
Length = 233
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 40 NSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLV 99
N + +++L+ N I +++ P+L TL +L GNPI ++ YR + +IP L
Sbjct: 88 NHITSITLFNN---NIYQFQKSFKDKFPKLETL--ILLGNPITEMENYRYFIIWLIPSLK 142
Query: 100 TLD 102
LD
Sbjct: 143 VLD 145
>sp|Q09JZ4|DAAF1_CHLRE Leucine-rich repeat-containing protein ODA7 OS=Chlamydomonas
reinhardtii GN=ODA7 PE=1 SV=1
Length = 432
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 32 SVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTM--IPQLVTLDSVLYGNPI-EKIREYR 88
SV L +L+TL L N +E +V + IP L L L GNP+ I+ YR
Sbjct: 129 SVAHLAECKALQTLDLQNNELEDP----GIVDILKQIPDLRCL--YLKGNPVVSNIKNYR 182
Query: 89 AVVSTMIPQLVTLDSVFILPSEKQ 112
V+ T IP L LD + +E++
Sbjct: 183 KVLVTSIPSLTYLDDRPVFDNERK 206
>sp|Q6FV04|RU2A_CANGA U2 small nuclear ribonucleoprotein A' OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=LEA1 PE=3 SV=1
Length = 266
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 8 LHNGWQVDQAILSEEDRVVIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIP 67
LH+ ++ +LS+ +V++ L + L++LSL N IE + + P
Sbjct: 70 LHHRDDIETLLLSKNRLMVLDAAL------LPSKLKSLSLAFNGIENFETL--IPLSHCP 121
Query: 68 QLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQE 113
V D VL GNPI + EYR + ++P L LD + +EK +
Sbjct: 122 STVR-DLVLIGNPICHLSEYRQRILALVPSLEVLDFKLVSQAEKAQ 166
>sp|Q9VR52|TILB_DROME Protein TILB OS=Drosophila melanogaster GN=tilB PE=1 SV=1
Length = 395
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 29 EYLSVFV--LRRVNSLR---TLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIEK 83
EYL+V + + RV +L +LS + IRE +V S + + VL GNP
Sbjct: 69 EYLNVAINNIERVENLEGCESLSKLDLTLNFIRELTSVES-LCGNYNLRELVLIGNPCVD 127
Query: 84 IREYRAVVSTMIPQLVTLDSVFILPSEK 111
YR V +PQL +LD V I PSE+
Sbjct: 128 YPHYRDYVVATLPQLNSLDCVEITPSER 155
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 27 IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIEKIRE 86
I E SV L +LR L L GNP YR V +PQL +LD V P E++R
Sbjct: 100 IRELTSVESLCGNYNLRELVLIGNPCVDYPHYRDYVVATLPQLNSLDCVEI-TPSERLRA 158
Query: 87 YR 88
R
Sbjct: 159 LR 160
>sp|Q9EST6|AN32B_RAT Acidic leucine-rich nuclear phosphoprotein 32 family member B
OS=Rattus norvegicus GN=Anp32b PE=2 SV=1
Length = 272
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 36 LRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDS 74
L+R++ L++L L+G + +YR V ++PQL LD
Sbjct: 109 LKRLDCLKSLDLFGCEVTNRSDYRETVFRLLPQLSYLDG 147
>sp|Q9EST5|AN32B_MOUSE Acidic leucine-rich nuclear phosphoprotein 32 family member B
OS=Mus musculus GN=Anp32b PE=1 SV=1
Length = 272
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 36 LRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDS 74
L+R++ L++L L+G + +YR V ++PQL LD
Sbjct: 109 LKRLDCLKSLDLFGCEVTNRSDYRETVFRLLPQLSYLDG 147
>sp|Q3V0L5|LRC43_MOUSE Leucine-rich repeat-containing protein 43 OS=Mus musculus GN=Lrrc43
PE=2 SV=1
Length = 667
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 75 VLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQETNALN 118
VL GNP+ + YR + L LD + + P+EK + LN
Sbjct: 252 VLQGNPLSLVPYYRGFTIDSLAHLCVLDDITVSPNEKHQFRGLN 295
>sp|Q6C417|RU2A_YARLI U2 small nuclear ribonucleoprotein A' OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=LEA1 PE=3 SV=1
Length = 230
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 36 LRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMI 95
++ + L TL L N I + ++ S + +TLD GNP++ + YR+ + +++
Sbjct: 110 VKNIAKLETLVLTQNGIATLGALESLKSLVNLTAITLD----GNPVQHVPRYRSYMISIL 165
Query: 96 PQLVTLDSVFILPSEKQETNALNAEI 121
P L LD + E+ E A+ ++
Sbjct: 166 PSLRMLDFQRVTQKERDEAEAMEFDV 191
>sp|Q02246|CNTN2_HUMAN Contactin-2 OS=Homo sapiens GN=CNTN2 PE=1 SV=1
Length = 1040
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 58 YRAVVSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPS 109
+ A ++ Q VTL+ +GNP+ +I+ +R V ++ PQ T + +PS
Sbjct: 245 FPAETYALVGQQVTLECFAFGNPVPRIK-WRKVDGSLSPQWTTAEPTLQIPS 295
>sp|P22063|CNTN2_RAT Contactin-2 OS=Rattus norvegicus GN=Cntn2 PE=1 SV=1
Length = 1040
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 65 MIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPS 109
++ Q VTL+ +GNP+ +I+ +R V ++ PQ T + +PS
Sbjct: 254 LVGQQVTLECFAFGNPVPRIK-WRKVDGSLSPQWATAEPTLQIPS 297
>sp|Q9NJE9|TILB_TRYBB Protein TILB homolog OS=Trypanosoma brucei brucei GN=lrrc6 PE=3
SV=1
Length = 383
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 76 LYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQET 114
L GNP K+ YRA V +PQL LD ++ +E+ E
Sbjct: 120 LTGNPCTKVAGYRAYVVHALPQLRELDGEEVIKTERLEA 158
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 38 RVNS-LRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDS 74
R N+ L L L GNP K+ YRA V +PQL LD
Sbjct: 110 RANAFLDQLHLTGNPCTKVAGYRAYVVHALPQLRELDG 147
>sp|Q86X45|TILB_HUMAN Protein TILB homolog OS=Homo sapiens GN=LRRC6 PE=1 SV=3
Length = 466
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 18/36 (50%)
Query: 76 LYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEK 111
L GNP YR V +PQL LD I PSE+
Sbjct: 120 LMGNPCASFDHYREFVVATLPQLKWLDGKEIEPSER 155
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 27 IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIEKIRE 86
I E S+ L+ L+ L L GNP YR V +PQL LD G IE
Sbjct: 100 IGELSSIKNLQHNIHLKELFLMGNPCASFDHYREFVVATLPQLKWLD----GKEIEPSER 155
Query: 87 YRAV--VSTMIPQL 98
+A+ S + PQ+
Sbjct: 156 IKALQDYSVIEPQI 169
>sp|Q4R3F0|TILB_MACFA Protein TILB homolog OS=Macaca fascicularis GN=LRCC6 PE=2 SV=1
Length = 466
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 76 LYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEK----QETNALNAEIR 122
L GNP YR V +PQL LD I PSE+ QE + + +IR
Sbjct: 120 LMGNPCAFFDHYREFVVATLPQLKWLDGKGIEPSERIKALQEYSIIEPQIR 170
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 22/48 (45%)
Query: 27 IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDS 74
I E S+ L+ L+ L L GNP YR V +PQL LD
Sbjct: 100 IGELSSIKTLKHNIHLKELFLMGNPCAFFDHYREFVVATLPQLKWLDG 147
>sp|Q7ZUP0|AN32A_DANRE Acidic leucine-rich nuclear phosphoprotein 32 family member A
OS=Danio rerio GN=anp32a PE=2 SV=1
Length = 254
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 27 IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDS 74
I++ ++ L+++ SL++L L+ + + +YR V ++PQL LD
Sbjct: 100 IKDLSTIEPLKKLESLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147
>sp|Q6P1U7|AN32B_XENTR Acidic leucine-rich nuclear phosphoprotein 32 family member B
OS=Xenopus tropicalis GN=anp32b PE=2 SV=1
Length = 242
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 38 RVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQ 97
R +L L+L GN I++I + +P L++LD L+ + + YR V ++PQ
Sbjct: 86 RTPNLTHLNLSGNKIKEINTLEPL--KKLPHLMSLD--LFNCEVTMLNNYRESVFELLPQ 141
Query: 98 LVTLDS 103
L LD
Sbjct: 142 LTFLDG 147
>sp|Q73MD3|MIAB_TREDE (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Treponema denticola (strain ATCC 35405 / CIP 103919 /
DSM 14222) GN=miaB PE=3 SV=1
Length = 451
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 29 EYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIEKIREYR 88
++ S +L+R+N + T+ Y N I++++E IP + +L G P E + +
Sbjct: 276 QHGSDTILKRMNRVYTIEHYKNRIKRLKE-------TIPDIALSTDILMGFPGETEDDVK 328
Query: 89 AVVSTMIPQLVTLDSVFILPSEKQE-TNALN 118
A + M Q + DS F+ +E T A N
Sbjct: 329 ATLDLM--QEIEFDSAFMYHYNPREGTKAFN 357
>sp|A2AL36|CNTRL_MOUSE Centriolin OS=Mus musculus GN=Cntrl PE=2 SV=2
Length = 2334
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 29 EYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDS-VLYGNPIEKIREY 87
E++ V+ +++ SLR L+L GN I +++ VS + P L L S VL NP+ + Y
Sbjct: 182 EHIPVWFAKKLKSLRVLNLKGNKISSLQD----VSKLKP-LQDLTSLVLIDNPVVALPHY 236
Query: 88 RAVVSTMIPQLVTLDSVFILPSEKQETNALNAEIRSYLLPKYEKLEAATFKRTAVSVE 145
+ + L +L+ + ++QE + L + E+LE K+T + E
Sbjct: 237 LQFIIFHLRSLESLEGQPVTTQDRQEA------FERFSLEEIERLEKDLEKKTVETEE 288
>sp|Q61330|CNTN2_MOUSE Contactin-2 OS=Mus musculus GN=Cntn2 PE=2 SV=2
Length = 1040
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 65 MIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPS 109
++ Q VTL+ +GNP+ +I+ +R V ++ PQ T + +PS
Sbjct: 254 LVGQQVTLECFAFGNPVPRIK-WRKVDGSLSPQWGTAEPTLQIPS 297
>sp|Q8CDN9|LRRC9_MOUSE Leucine-rich repeat-containing protein 9 OS=Mus musculus GN=Lrrc9
PE=2 SV=2
Length = 1456
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 41 SLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSV 75
SLR L++YGNPI + +R V+ +P L LD +
Sbjct: 1310 SLRELTVYGNPICRKMVHRHVLIFRLPNLQMLDGI 1344
>sp|Q9CDR6|EZRA_LACLA Septation ring formation regulator EzrA OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=ezrA PE=3 SV=1
Length = 576
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 27 IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIE 82
I+E L ++ R + LYG I ++ ++ A + T Q VTL+S G+PIE
Sbjct: 145 IQESLDLYDNLRSDIADNADLYGTVITELEKHLANIETEFSQFVTLNST--GDPIE 198
>sp|A2RNU8|EZRA_LACLM Septation ring formation regulator EzrA OS=Lactococcus lactis
subsp. cremoris (strain MG1363) GN=ezrA PE=3 SV=1
Length = 576
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 27 IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIE 82
I+E L ++ R + LYG I ++ ++ A + T Q VTL+S G+PIE
Sbjct: 145 IQESLDLYDNLRSDIADNADLYGTVITELEKHLANIETEFSQFVTLNST--GDPIE 198
>sp|Q02VY0|EZRA_LACLS Septation ring formation regulator EzrA OS=Lactococcus lactis
subsp. cremoris (strain SK11) GN=ezrA PE=3 SV=1
Length = 576
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 27 IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIE 82
I+E L ++ R + LYG I ++ ++ A + T Q VTL+S G+PIE
Sbjct: 145 IQESLDLYDNLRSDIADNADLYGTVITELEKHLANIETEFSQFVTLNST--GDPIE 198
>sp|B9DP91|KHSE_STACT Homoserine kinase OS=Staphylococcus carnosus (strain TM300) GN=thrB
PE=3 SV=1
Length = 304
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 73 DSVLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQETNALNAEIRSYLLPKYEKL 132
DS +G+ ++ Y A+ +TM+ L+ D ++L + E + + R L+P++EK+
Sbjct: 188 DSFKHGDAVQ----YSAISNTMLSALIQHD--YVLAGKLMEMDGFHEPFRQKLIPEFEKV 241
Query: 133 EA 134
++
Sbjct: 242 KS 243
>sp|P51122|AN32A_BOVIN Acidic leucine-rich nuclear phosphoprotein 32 family member A
OS=Bos taurus GN=ANP32A PE=1 SV=2
Length = 249
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 29/48 (60%)
Query: 27 IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDS 74
I++ ++ L+++ +L++L L+ + + +YR V ++PQL LD
Sbjct: 100 IKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147
>sp|Q8CBC6|LRRN3_MOUSE Leucine-rich repeat neuronal protein 3 OS=Mus musculus GN=Lrrn3
PE=2 SV=1
Length = 707
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 21/100 (21%)
Query: 35 VLRRVNSLRTLSLYGNPIEKIREYRAVVSTMI----------PQLVTLDSVLYGNPIEKI 84
L++ +L+ L L NPI +IR R S M+ P+LV++DS+ ++ +
Sbjct: 255 ALQKAVNLKFLDLNKNPINRIR--RGDFSNMLHLKELGINNMPELVSIDSLA----VDNL 308
Query: 85 REYRAVVSTMIPQL--VTLDSVFILPSEKQ---ETNALNA 119
+ R + +T P+L + ++ F LP + TNAL+A
Sbjct: 309 PDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNTNALSA 348
>sp|Q5R482|LRRN3_PONAB Leucine-rich repeat neuronal protein 3 OS=Pongo abelii GN=LRRN3
PE=2 SV=1
Length = 708
Score = 31.6 bits (70), Expect = 1.8, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 20/102 (19%)
Query: 36 LRRVNSLRTLSLYGNPIEKIREYRAVVSTMI----------PQLVTLDSVLYGNPIEKIR 85
L++V +L+ L L NPI +IR R S M+ P+L+++DS+ ++ +
Sbjct: 256 LQKVVNLKFLDLNKNPINRIR--RGDFSNMLHLKELGINNMPELISIDSL----AVDNLP 309
Query: 86 EYRAVVSTMIPQLVTL--DSVFILPSEKQETNALNAEIRSYL 125
+ R + +T P+L + ++ F LP K E+ LN+ S L
Sbjct: 310 DLRKIEATNNPRLSYIHPNAFFRLP--KLESLMLNSNALSAL 349
>sp|Q9H3W5|LRRN3_HUMAN Leucine-rich repeat neuronal protein 3 OS=Homo sapiens GN=LRRN3
PE=2 SV=1
Length = 708
Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 20/102 (19%)
Query: 36 LRRVNSLRTLSLYGNPIEKIREYRAVVSTMI----------PQLVTLDSVLYGNPIEKIR 85
L++V +L+ L L NPI +IR R S M+ P+L+++DS+ ++ +
Sbjct: 256 LQKVVNLKFLDLNKNPINRIR--RGDFSNMLHLKELGINNMPELISIDSL----AVDNLP 309
Query: 86 EYRAVVSTMIPQLVTL--DSVFILPSEKQETNALNAEIRSYL 125
+ R + +T P+L + ++ F LP K E+ LN+ S L
Sbjct: 310 DLRKIEATNNPRLSYIHPNAFFRLP--KLESLMLNSNALSAL 349
>sp|Q8HY67|AN32A_CANFA Acidic leucine-rich nuclear phosphoprotein 32 family member A
OS=Canis familiaris GN=ANP32A PE=2 SV=1
Length = 249
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 29/48 (60%)
Query: 27 IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDS 74
I++ ++ L+++ +L++L L+ + + +YR V ++PQL LD
Sbjct: 100 IKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147
>sp|Q06819|DIB1_YEAST Spliceosomal protein DIB1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DIB1 PE=1 SV=1
Length = 143
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 2 SYMLGHLHNGWQVDQAILSEEDRVVI 27
S +L L GW VDQAI++E R+V+
Sbjct: 3 SVLLPQLRTGWHVDQAIVTETKRLVV 28
>sp|P39687|AN32A_HUMAN Acidic leucine-rich nuclear phosphoprotein 32 family member A
OS=Homo sapiens GN=ANP32A PE=1 SV=1
Length = 249
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 29/48 (60%)
Query: 27 IEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDS 74
I++ ++ L+++ +L++L L+ + + +YR V ++PQL LD
Sbjct: 100 IKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147
>sp|Q6A1I3|AN32B_SHEEP Acidic leucine-rich nuclear phosphoprotein 32 family member B
OS=Ovis aries GN=ANP32B PE=2 SV=1
Length = 261
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 36 LRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDS 74
L+++ L++L L+ + + +YR V ++PQL LD
Sbjct: 109 LKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDG 147
>sp|Q92688|AN32B_HUMAN Acidic leucine-rich nuclear phosphoprotein 32 family member B
OS=Homo sapiens GN=ANP32B PE=1 SV=1
Length = 251
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 36 LRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDS 74
L+++ L++L L+ + + +YR V ++PQL LD
Sbjct: 109 LKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDG 147
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,576,390
Number of Sequences: 539616
Number of extensions: 1691613
Number of successful extensions: 4810
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 4694
Number of HSP's gapped (non-prelim): 170
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)