Your job contains 1 sequence.
>psy4164
MSYMLGHLHNGWQVDQAILSEEDRVVIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYRA
VVSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLDSVFILPSEKQETNALNAE
IRSYLLPKYEKLEAATFKRTAVSVESE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4164
(147 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031601 - symbol:Dim1 "Dim1" species:7227 "Drosoph... 134 4.7e-09 1
UNIPROTKB|E1C1X5 - symbol:TXNL4A "Uncharacterized protein... 134 4.7e-09 1
UNIPROTKB|F1MTU6 - symbol:TXNL4A "Uncharacterized protein... 134 4.7e-09 1
UNIPROTKB|E2R204 - symbol:TXNL4A "Uncharacterized protein... 134 4.7e-09 1
UNIPROTKB|K7EJU2 - symbol:TXNL4A "Thioredoxin-like protei... 134 4.7e-09 1
UNIPROTKB|K7EMX5 - symbol:TXNL4A "Thioredoxin-like protei... 134 4.7e-09 1
UNIPROTKB|K7EPA6 - symbol:TXNL4A "Thioredoxin-like protei... 134 4.7e-09 1
UNIPROTKB|K7ES07 - symbol:TXNL4A "Thioredoxin-like protei... 134 4.7e-09 1
UNIPROTKB|O14835 - symbol:TXNL4A "Dim1p homolog" species:... 134 4.7e-09 1
UNIPROTKB|P83876 - symbol:TXNL4A "Thioredoxin-like protei... 134 4.7e-09 1
UNIPROTKB|F1RZA0 - symbol:TXNL4A "Uncharacterized protein... 134 4.7e-09 1
ZFIN|ZDB-GENE-041010-25 - symbol:txnl4a "thioredoxin-like... 129 1.6e-08 1
ZFIN|ZDB-GENE-060929-962 - symbol:lrtomt "leucine rich tr... 113 7.8e-07 1
POMBASE|SPCC16A11.05c - symbol:dim1 "U4/U6 x U5 tri-snRNP... 109 2.1e-06 1
TAIR|locus:2150768 - symbol:YLS8 "AT5G08290" species:3702... 107 3.4e-06 1
RGD|1565856 - symbol:Lrrc51 "leucine rich repeat containi... 106 1.9e-05 1
MGI|MGI:1916608 - symbol:Lrrc51 "leucine rich repeat cont... 105 3.2e-05 1
GENEDB_PFALCIPARUM|PFL1520w - symbol:PFL1520w "dim1 prote... 97 0.00012 1
>FB|FBgn0031601 [details] [associations]
symbol:Dim1 "Dim1" species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR004123
Pfam:PF02966 PIRSF:PIRSF017199 GO:GO:0007067 GO:GO:0007052
EMBL:AE014134 GO:GO:0022008 Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF52833 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
eggNOG:COG0526 GeneTree:ENSGT00390000010779 KO:K12859 OMA:YRNKHIM
PANTHER:PTHR12052 EMBL:AY071048 RefSeq:NP_608830.3 UniGene:Dm.20462
SMR:Q8SZ87 IntAct:Q8SZ87 MINT:MINT-752530 STRING:Q8SZ87
EnsemblMetazoa:FBtr0077435 GeneID:33645 KEGG:dme:Dmel_CG3058
UCSC:CG3058-RA CTD:50547 FlyBase:FBgn0031601 InParanoid:Q8SZ87
OrthoDB:EOG4F1VKG GenomeRNAi:33645 NextBio:784589 Uniprot:Q8SZ87
Length = 142
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDRVV+
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVV 27
>UNIPROTKB|E1C1X5 [details] [associations]
symbol:TXNL4A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] InterPro:IPR004123 Pfam:PF02966
PIRSF:PIRSF017199 GO:GO:0007067 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005681
GeneTree:ENSGT00390000010779 KO:K12859 OMA:YRNKHIM
PANTHER:PTHR12052 CTD:10907 EMBL:AADN02027364 EMBL:AADN02027365
EMBL:AADN02027366 IPI:IPI00592671 RefSeq:XP_418903.1
ProteinModelPortal:E1C1X5 Ensembl:ENSGALT00000028084 GeneID:420811
KEGG:gga:420811 NextBio:20823673 Uniprot:E1C1X5
Length = 142
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDRVV+
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVV 27
>UNIPROTKB|F1MTU6 [details] [associations]
symbol:TXNL4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007067 "mitosis" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] InterPro:IPR004123
Pfam:PF02966 PIRSF:PIRSF017199 GO:GO:0007067 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005681
GeneTree:ENSGT00390000010779 OMA:YRNKHIM PANTHER:PTHR12052
EMBL:DAAA02055999 IPI:IPI00696854 UniGene:Bt.22492
ProteinModelPortal:F1MTU6 Ensembl:ENSBTAT00000018067 Uniprot:F1MTU6
Length = 142
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDRVV+
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVV 27
>UNIPROTKB|E2R204 [details] [associations]
symbol:TXNL4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007067 "mitosis" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] InterPro:IPR004123
Pfam:PF02966 PIRSF:PIRSF017199 GO:GO:0007067 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005681
GeneTree:ENSGT00390000010779 KO:K12859 OMA:YRNKHIM
PANTHER:PTHR12052 CTD:10907 EMBL:AAEX03000011 RefSeq:XP_533363.2
ProteinModelPortal:E2R204 Ensembl:ENSCAFT00000000009 GeneID:476156
KEGG:cfa:476156 NextBio:20851871 Uniprot:E2R204
Length = 142
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDRVV+
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVV 27
>UNIPROTKB|K7EJU2 [details] [associations]
symbol:TXNL4A "Thioredoxin-like protein 4A" species:9606
"Homo sapiens" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] InterPro:IPR004123 Pfam:PF02966
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
PANTHER:PTHR12052 HGNC:HGNC:30551 EMBL:AC090360
Ensembl:ENST00000588162 Uniprot:K7EJU2
Length = 57
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDRVV+
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVV 27
>UNIPROTKB|K7EMX5 [details] [associations]
symbol:TXNL4A "Thioredoxin-like protein 4A" species:9606
"Homo sapiens" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] InterPro:IPR004123 Pfam:PF02966
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
PANTHER:PTHR12052 HGNC:HGNC:30551 EMBL:AC090360
Ensembl:ENST00000586295 Uniprot:K7EMX5
Length = 86
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDRVV+
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVV 27
>UNIPROTKB|K7EPA6 [details] [associations]
symbol:TXNL4A "Thioredoxin-like protein 4A" species:9606
"Homo sapiens" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] InterPro:IPR004123 Pfam:PF02966
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
PANTHER:PTHR12052 HGNC:HGNC:30551 EMBL:AC090360
Ensembl:ENST00000585769 Ensembl:ENST00000586825 Uniprot:K7EPA6
Length = 54
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDRVV+
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVV 27
>UNIPROTKB|K7ES07 [details] [associations]
symbol:TXNL4A "Thioredoxin-like protein 4A" species:9606
"Homo sapiens" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] InterPro:IPR004123 Pfam:PF02966
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
PANTHER:PTHR12052 HGNC:HGNC:30551 EMBL:AC090360
Ensembl:ENST00000591711 Uniprot:K7ES07
Length = 103
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDRVV+
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVV 27
>UNIPROTKB|O14835 [details] [associations]
symbol:TXNL4A "Dim1p homolog" species:9606 "Homo sapiens"
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR004123
Pfam:PF02966 GO:GO:0005634 GO:GO:0005737 GO:GO:0007067
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005681
EMBL:CH471117 HOGENOM:HOG000198385 PANTHER:PTHR12052
UniGene:Hs.465498 HGNC:HGNC:30551 ChiTaRS:TXNL4A EMBL:AC090360
EMBL:AF023612 IPI:IPI00384845 SMR:O14835 MINT:MINT-1440192
STRING:O14835 Ensembl:ENST00000355491 UCSC:uc002lnr.3
Uniprot:O14835
Length = 91
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDRVV+
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVV 27
>UNIPROTKB|P83876 [details] [associations]
symbol:TXNL4A "Thioredoxin-like protein 4A" species:9606
"Homo sapiens" [GO:0051301 "cell division" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=TAS] [GO:0000245 "spliceosomal complex assembly"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0007067 "mitosis" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR004123 Pfam:PF02966
PIRSF:PIRSF017199 EMBL:AF146373 GO:GO:0005654 GO:GO:0051301
GO:GO:0007067 Reactome:REACT_1675 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005681 EMBL:CH471117
GO:GO:0000245 PDB:1SYX PDBsum:1SYX eggNOG:COG0526
HOGENOM:HOG000198385 KO:K12859 OMA:YRNKHIM PANTHER:PTHR12052
EMBL:AF023611 EMBL:AK314901 EMBL:BC001046 EMBL:BC019272
IPI:IPI00216338 RefSeq:NP_006692.1 UniGene:Hs.465498 PDB:1PQN
PDB:1QGV PDBsum:1PQN PDBsum:1QGV ProteinModelPortal:P83876
SMR:P83876 IntAct:P83876 MINT:MINT-1783239 STRING:P83876
PhosphoSite:P83876 DMDM:46577662 PaxDb:P83876 PRIDE:P83876
DNASU:10907 Ensembl:ENST00000269601 GeneID:10907 KEGG:hsa:10907
UCSC:uc002lnp.3 CTD:10907 GeneCards:GC18M077732 HGNC:HGNC:30551
MIM:611595 neXtProt:NX_P83876 PharmGKB:PA134937290
HOVERGEN:HBG053996 InParanoid:P83876 OrthoDB:EOG4BG8X8
PhylomeDB:P83876 ChiTaRS:TXNL4A EvolutionaryTrace:P83876
GenomeRNAi:10907 NextBio:41427 ArrayExpress:P83876 Bgee:P83876
CleanEx:HS_TXNL4A Genevestigator:P83876 GermOnline:ENSG00000141759
Uniprot:P83876
Length = 142
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDRVV+
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVV 27
>UNIPROTKB|F1RZA0 [details] [associations]
symbol:TXNL4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007067 "mitosis" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] InterPro:IPR004123
Pfam:PF02966 PIRSF:PIRSF017199 GO:GO:0007067 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005681
GeneTree:ENSGT00390000010779 KO:K12859 OMA:YRNKHIM
PANTHER:PTHR12052 CTD:10907 EMBL:CU041273 RefSeq:XP_001924886.1
UniGene:Ssc.17509 ProteinModelPortal:F1RZA0
Ensembl:ENSSSCT00000006353 GeneID:100155820 KEGG:ssc:100155820
Uniprot:F1RZA0
Length = 142
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDRVV+
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVV 27
>ZFIN|ZDB-GENE-041010-25 [details] [associations]
symbol:txnl4a "thioredoxin-like 4A" species:7955
"Danio rerio" [GO:0007067 "mitosis" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] InterPro:IPR004123
Pfam:PF02966 PIRSF:PIRSF017199 ZFIN:ZDB-GENE-041010-25
GO:GO:0007067 Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
GO:GO:0005681 KO:K12859 PANTHER:PTHR12052 CTD:10907
HOVERGEN:HBG053996 EMBL:BC083448 IPI:IPI00503866
RefSeq:NP_001005953.1 UniGene:Dr.82160 ProteinModelPortal:Q5XJ58
SMR:Q5XJ58 STRING:Q5XJ58 GeneID:449780 KEGG:dre:449780
InParanoid:Q5XJ58 NextBio:20832856 ArrayExpress:Q5XJ58
Uniprot:Q5XJ58
Length = 142
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSYML HLHNGWQVDQAILSEEDR ++
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRAIV 27
>ZFIN|ZDB-GENE-060929-962 [details] [associations]
symbol:lrtomt "leucine rich transmembrane and
0-methyltransferase domain containing" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-060929-962 InterPro:IPR003603
SMART:SM00446 CTD:220074 eggNOG:NOG312906 HOVERGEN:HBG055282
OrthoDB:EOG4VX268 HOGENOM:HOG000067975 EMBL:BC124442
IPI:IPI00637356 RefSeq:NP_001070236.1 UniGene:Dr.83523
ProteinModelPortal:Q08C25 GeneID:767801 KEGG:dre:767801
InParanoid:Q08C25 NextBio:20918179 ArrayExpress:Q08C25
Uniprot:Q08C25
Length = 181
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 29/97 (29%), Positives = 51/97 (52%)
Query: 35 VLRRVNSLRTLSLYGNPIEKIREYRAVVSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTM 94
VL ++ LR L L+GN I+++ E + ++P L T+ L+GNPI R+YRA + M
Sbjct: 87 VLTQLKELRLLYLHGNNIQELSEVDKLA--VLPSLHTI--TLHGNPIVSERDYRAHLIAM 142
Query: 95 IPQLVTLDSVFILPSEKQETNALNAEIRSYLLPKYEK 131
+P + +D + E++ T+ ++ Y K
Sbjct: 143 LPHVKMIDFSAVTKQERELTSVWQKSKNTHKSTGYSK 179
>POMBASE|SPCC16A11.05c [details] [associations]
symbol:dim1 "U4/U6 x U5 tri-snRNP complex subunit
Dim1" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISS] InterPro:IPR004123 Pfam:PF02966
PIRSF:PIRSF017199 PomBase:SPCC16A11.05c GO:GO:0051301 GO:GO:0007067
EMBL:CU329672 GenomeReviews:CU329672_GR Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005681 GO:GO:0046540
GO:GO:0045292 eggNOG:COG0526 HOGENOM:HOG000198385 KO:K12859
OrthoDB:EOG48KVMN PANTHER:PTHR12052 EMBL:AF001214 PIR:T41078
RefSeq:NP_587992.1 ProteinModelPortal:P87215 SMR:P87215
STRING:P87215 EnsemblFungi:SPCC16A11.05c.1 GeneID:2539369
KEGG:spo:SPCC16A11.05c OMA:RINWAVE NextBio:20800534 Uniprot:P87215
Length = 142
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSY L HLH+GW VDQAILSE++R+V+
Sbjct: 1 MSYFLPHLHSGWHVDQAILSEQERLVV 27
>TAIR|locus:2150768 [details] [associations]
symbol:YLS8 "AT5G08290" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0007067 "mitosis" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0000902 "cell
morphogenesis" evidence=RCA] [GO:0006623 "protein targeting to
vacuole" evidence=RCA] [GO:0006944 "cellular membrane fusion"
evidence=RCA] [GO:0007030 "Golgi organization" evidence=RCA]
[GO:0007033 "vacuole organization" evidence=RCA] [GO:0016049 "cell
growth" evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0016197 "endosomal transport" evidence=RCA]
[GO:0048193 "Golgi vesicle transport" evidence=RCA]
InterPro:IPR004123 Pfam:PF02966 PIRSF:PIRSF017199 GO:GO:0005634
GO:GO:0005737 EMBL:CP002688 GO:GO:0007067 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005681 EMBL:AL392174
KO:K12859 OMA:YRNKHIM PANTHER:PTHR12052 EMBL:AF324685 EMBL:AF326857
EMBL:AF339680 EMBL:AF375407 EMBL:AY066051 EMBL:AB047811
IPI:IPI00526885 RefSeq:NP_196446.1 UniGene:At.10132
ProteinModelPortal:Q9FE62 SMR:Q9FE62 STRING:Q9FE62 PRIDE:Q9FE62
EnsemblPlants:AT5G08290.1 GeneID:830725 KEGG:ath:AT5G08290
TAIR:At5g08290 InParanoid:Q9FE62 PhylomeDB:Q9FE62
ProtClustDB:PLN00410 ArrayExpress:Q9FE62 Genevestigator:Q9FE62
Uniprot:Q9FE62
Length = 142
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 18/27 (66%), Positives = 25/27 (92%)
Query: 1 MSYMLGHLHNGWQVDQAILSEEDRVVI 27
MSY+L HLH+GW VDQ+IL+EE+R+V+
Sbjct: 1 MSYLLPHLHSGWAVDQSILAEEERLVV 27
>RGD|1565856 [details] [associations]
symbol:Lrrc51 "leucine rich repeat containing 51" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1565856 GO:GO:0005737
EMBL:CH473956 eggNOG:NOG312906 OrthoDB:EOG4VX268 CTD:69358
GeneTree:ENSGT00510000047925 HOGENOM:HOG000067975 EMBL:EU627092
IPI:IPI00199973 RefSeq:NP_001099754.1 UniGene:Rn.162471
Ensembl:ENSRNOT00000027261 GeneID:293156 KEGG:rno:293156
UCSC:RGD:1565856 OMA:RPLKHSK NextBio:635481 Genevestigator:B6CZ61
Uniprot:B6CZ61
Length = 192
Score = 106 (42.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 34/103 (33%), Positives = 54/103 (52%)
Query: 1 MSYMLGHLHN-GWQVDQAILSEEDRVVIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYR 59
+S +L H N W +D LS D I+ L+ F +L L L+GN I ++ E
Sbjct: 71 VSQLLQHPENLAW-ID---LSFNDLTTIDPVLTTFF-----NLSVLYLHGNSIHRLGEVN 121
Query: 60 AVVSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLD 102
+ ++P+L +L L+GNPIE+ + YR V +P++ T D
Sbjct: 122 KLA--VLPRLRSL--TLHGNPIEEEKGYRQYVLCNLPRITTFD 160
>MGI|MGI:1916608 [details] [associations]
symbol:Lrrc51 "leucine rich repeat containing 51"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1916608 GO:GO:0005737 EMBL:CH466531
eggNOG:NOG312906 HOVERGEN:HBG055282 OrthoDB:EOG4VX268
ChiTaRS:LRTOMT EMBL:EU627089 EMBL:EU627090 EMBL:AK005758
EMBL:BC025128 IPI:IPI00118755 IPI:IPI00658843 RefSeq:NP_001156446.1
RefSeq:NP_081329.1 UniGene:Mm.214841 ProteinModelPortal:Q9DAK8
SMR:Q9DAK8 PRIDE:Q9DAK8 DNASU:69358 Ensembl:ENSMUST00000098236
Ensembl:ENSMUST00000106963 Ensembl:ENSMUST00000106964
Ensembl:ENSMUST00000163903 GeneID:69358 KEGG:mmu:69358
UCSC:uc009ipx.2 UCSC:uc009ipy.2 CTD:69358
GeneTree:ENSGT00510000047925 HOGENOM:HOG000067975 InParanoid:Q9DAK8
NextBio:329212 Bgee:Q9DAK8 CleanEx:MM_LRRC51 Genevestigator:Q9DAK8
GermOnline:ENSMUSG00000064307 Uniprot:Q9DAK8
Length = 192
Score = 105 (42.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 34/103 (33%), Positives = 54/103 (52%)
Query: 1 MSYMLGHLHN-GWQVDQAILSEEDRVVIEEYLSVFVLRRVNSLRTLSLYGNPIEKIREYR 59
+S +L H N W +D LS D I+ L+ F +L L L+GN I ++ E
Sbjct: 71 VSQLLQHPENLAW-ID---LSFNDLTTIDPVLTTFF-----NLSVLYLHGNGIHRLGEVN 121
Query: 60 AVVSTMIPQLVTLDSVLYGNPIEKIREYRAVVSTMIPQLVTLD 102
+ ++P+L +L L+GNPIE+ + YR V +P++ T D
Sbjct: 122 KLA--VLPRLRSL--TLHGNPIEEEKGYRQYVLCNLPRITTFD 160
>GENEDB_PFALCIPARUM|PFL1520w [details] [associations]
symbol:PFL1520w "dim1 protein homolog, putative"
species:5833 "Plasmodium falciparum" [GO:0000245 "spliceosomal
complex assembly" evidence=ISS] InterPro:IPR004123 Pfam:PF02966
PIRSF:PIRSF017199 GO:GO:0007067 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005681 EMBL:AE014188
HOGENOM:HOG000198385 KO:K12859 OMA:YRNKHIM PANTHER:PTHR12052
ProtClustDB:CLSZ2429039 RefSeq:XP_001350710.1
ProteinModelPortal:Q8I5A5 SMR:Q8I5A5 EnsemblProtists:PFL1520w:mRNA
GeneID:811356 KEGG:pfa:PFL1520w EuPathDB:PlasmoDB:PF3D7_1231500
Uniprot:Q8I5A5
Length = 139
Score = 97 (39.2 bits), Expect = 0.00012, P = 0.00012
Identities = 18/23 (78%), Positives = 21/23 (91%)
Query: 4 MLGHLHNGWQVDQAILSEEDRVV 26
ML HLH+GW VDQAILSEE+R+V
Sbjct: 1 MLYHLHSGWDVDQAILSEEERLV 23
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.361 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 147 147 0.00091 103 3 11 22 0.46 31
30 0.50 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 504 (54 KB)
Total size of DFA: 107 KB (2074 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.48u 0.09s 15.57t Elapsed: 00:00:03
Total cpu time: 15.49u 0.09s 15.58t Elapsed: 00:00:04
Start: Thu Aug 15 13:10:29 2013 End: Thu Aug 15 13:10:33 2013