BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4171
(309 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|347971574|ref|XP_313179.4| AGAP004261-PA [Anopheles gambiae str. PEST]
gi|347971576|ref|XP_003436763.1| AGAP004261-PB [Anopheles gambiae str. PEST]
gi|347971578|ref|XP_003436764.1| AGAP004261-PC [Anopheles gambiae str. PEST]
gi|333468729|gb|EAA44753.4| AGAP004261-PA [Anopheles gambiae str. PEST]
gi|333468730|gb|EGK97037.1| AGAP004261-PB [Anopheles gambiae str. PEST]
gi|333468731|gb|EGK97038.1| AGAP004261-PC [Anopheles gambiae str. PEST]
Length = 1056
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 244/292 (83%), Positives = 264/292 (90%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIEKNGG+ PLTYHQFQ+I+A MD+P EA +T ++ A TP DDHD+KYGVPTLE
Sbjct: 233 RIIEKNGGRAPLTYHQFQAIIASMDAPPQPEAAITLDVIGNANTPQYDDHDDKYGVPTLE 292
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF+ E L PP W GGETEA+ RLERHLERKAWVASFGRPKMTPQSLLASQTGLSP+LR
Sbjct: 293 ELGFETEALRPPVWIGGETEALARLERHLERKAWVASFGRPKMTPQSLLASQTGLSPYLR 352
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
FGCLSTRLFY+ L LYK+IKKA PPLSLHGQLLWREFFYCAAT+NP FD+M GNPICVQ
Sbjct: 353 FGCLSTRLFYYQLTDLYKKIKKACPPLSLHGQLLWREFFYCAATKNPTFDKMAGNPICVQ 412
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
IPWD N EALAKWA+ QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW+SWEEG
Sbjct: 413 IPWDRNAEALAKWASGQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWISWEEG 472
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
MK+F+ELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD+I
Sbjct: 473 MKVFEELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDYI 524
>gi|312372433|gb|EFR20390.1| hypothetical protein AND_20159 [Anopheles darlingi]
Length = 1043
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 245/292 (83%), Positives = 264/292 (90%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIEKNGG+ PLTYHQFQ+I+A MD+P E +T + ATTPL DDHD+KYGVPTLE
Sbjct: 240 RIIEKNGGRAPLTYHQFQAIIASMDAPPQPETTITLEAIGGATTPLYDDHDDKYGVPTLE 299
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF+ E L PP W GGETEA+ RLERHLERKAWVASFGRPKMTPQSLLASQTGLSP+LR
Sbjct: 300 ELGFETEALRPPVWIGGETEALARLERHLERKAWVASFGRPKMTPQSLLASQTGLSPYLR 359
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
FGCLSTRLFY+ L LYK+IKKA PPLSLHGQLLWREFFYCAAT+NP FD+M GNPICVQ
Sbjct: 360 FGCLSTRLFYYQLTDLYKKIKKACPPLSLHGQLLWREFFYCAATKNPTFDKMAGNPICVQ 419
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
IPWD N EALAKWA+ QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW+SWEEG
Sbjct: 420 IPWDRNSEALAKWASGQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWISWEEG 479
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
MK+F+ELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD+I
Sbjct: 480 MKVFEELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDYI 531
>gi|340720203|ref|XP_003398531.1| PREDICTED: cryptochrome-1-like [Bombus terrestris]
Length = 574
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 249/309 (80%), Positives = 275/309 (88%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ S+ +K++ +L IIE+NGGK PLTYHQFQ++VA MD P P+ + VT + A
Sbjct: 138 LGISVVQKVSHTLYKLDEIIERNGGKPPLTYHQFQNVVASMDPPEPSVSTVTSACIGSAY 197
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TPL++DHD+ YGVPTLEELGFD EGLLPP W GGE+EA+ RLERHLERKAWVASFGRPKM
Sbjct: 198 TPLKEDHDDHYGVPTLEELGFDTEGLLPPVWVGGESEALARLERHLERKAWVASFGRPKM 257
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
TPQSLL SQTGLSP+LRFGCLSTRLFY+ L LYK+IKKA PPLSLHGQLLWREFFYCAA
Sbjct: 258 TPQSLLPSQTGLSPYLRFGCLSTRLFYYQLTDLYKKIKKAVPPLSLHGQLLWREFFYCAA 317
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
T+NPNFDRM GNPICVQIPWD N+EALAKWAN QTGFPWIDAIMTQLREEGWIHHLARHA
Sbjct: 318 TKNPNFDRMQGNPICVQIPWDKNVEALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHA 377
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGR
Sbjct: 378 VACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGR 437
Query: 301 KADPNGDFI 309
KADPNGD+I
Sbjct: 438 KADPNGDYI 446
>gi|429544803|gb|AGA01579.1| cryptochrome 2 [Rhyparobia maderae]
Length = 586
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 247/309 (79%), Positives = 274/309 (88%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ S+ +++ +L IIE NGGK PLTYHQFQ+++A M P PAE ++P + A
Sbjct: 125 LGISVITRVSHTLYRLENIIENNGGKAPLTYHQFQTVIASMGPPPPAEPNISPKFMNGAY 184
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TP+ DDHD+KYGVPTLEELGFDIEGLLPP W+GGE EA+ RLERHLERKAWVASFGRPKM
Sbjct: 185 TPIGDDHDDKYGVPTLEELGFDIEGLLPPVWQGGEPEALARLERHLERKAWVASFGRPKM 244
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
TPQSLLASQTGLSP+LRFGCLSTRLFY+ L LY++IKKA PPLSLHGQLLWREFFYCAA
Sbjct: 245 TPQSLLASQTGLSPYLRFGCLSTRLFYYQLTDLYEKIKKACPPLSLHGQLLWREFFYCAA 304
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
TRNPNFD+M+GNPICVQIPWD N EALAKWAN QTGFPWIDAIMTQLREEGWIHHLARHA
Sbjct: 305 TRNPNFDKMMGNPICVQIPWDKNAEALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHA 364
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEGMK+F+ELLLDADWSVNAGMWMWLSC SFFQQFFHCYCPV+FGR
Sbjct: 365 VACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGMWMWLSCPSFFQQFFHCYCPVRFGR 424
Query: 301 KADPNGDFI 309
KADPNGD+I
Sbjct: 425 KADPNGDYI 433
>gi|78191297|gb|ABB29887.1| cryptochrome 2 [Anopheles gambiae]
Length = 961
Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust.
Identities = 244/292 (83%), Positives = 264/292 (90%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIEKNGG+ PLTYHQFQ+I+A MD+P EA +T ++ A TP DDHD+KYGVPTLE
Sbjct: 138 RIIEKNGGRAPLTYHQFQAIIASMDAPPQPEAAITLDVIGNANTPQYDDHDDKYGVPTLE 197
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF+ E L PP W GGETEA+ RLERHLERKAWVASFGRPKMTPQSLLASQTGLSP+LR
Sbjct: 198 ELGFETEALRPPVWIGGETEALARLERHLERKAWVASFGRPKMTPQSLLASQTGLSPYLR 257
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
FGCLSTRLFY+ L LYK+IKKA PPLSLHGQLLWREFFYCAAT+NP FD+M GNPICVQ
Sbjct: 258 FGCLSTRLFYYQLTDLYKKIKKACPPLSLHGQLLWREFFYCAATKNPTFDKMAGNPICVQ 317
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
IPWD N EALAKWA+ QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW+SWEEG
Sbjct: 318 IPWDRNAEALAKWASGQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWISWEEG 377
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
MK+F+ELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD+I
Sbjct: 378 MKVFEELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDYI 429
>gi|350420124|ref|XP_003492407.1| PREDICTED: cryptochrome-1 [Bombus impatiens]
gi|129593762|gb|ABO31112.1| cryptochrome 2 protein [Bombus impatiens]
Length = 574
Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust.
Identities = 249/309 (80%), Positives = 274/309 (88%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ S+ +K++ +L IIE+NGGK PLTYHQFQ++VA MD P P+ VT + A
Sbjct: 138 LGISVVQKVSHTLYKLDEIIERNGGKPPLTYHQFQNVVASMDPPEPSVPTVTSACIGSAY 197
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TPL++DHD+ YGVPTLEELGFD EGLLPP W GGE+EA+ RLERHLERKAWVASFGRPKM
Sbjct: 198 TPLKEDHDDHYGVPTLEELGFDTEGLLPPVWVGGESEALARLERHLERKAWVASFGRPKM 257
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
TPQSLL SQTGLSP+LRFGCLSTRLFY+ L LYK+IKKA PPLSLHGQLLWREFFYCAA
Sbjct: 258 TPQSLLPSQTGLSPYLRFGCLSTRLFYYQLTDLYKKIKKAVPPLSLHGQLLWREFFYCAA 317
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
T+NPNFDRM GNPICVQIPWD N+EALAKWAN QTGFPWIDAIMTQLREEGWIHHLARHA
Sbjct: 318 TKNPNFDRMQGNPICVQIPWDKNVEALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHA 377
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGR
Sbjct: 378 VACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGR 437
Query: 301 KADPNGDFI 309
KADPNGD+I
Sbjct: 438 KADPNGDYI 446
>gi|157131015|ref|XP_001655778.1| DNA photolyase [Aedes aegypti]
gi|108871687|gb|EAT35912.1| AAEL011967-PA [Aedes aegypti]
Length = 820
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 245/292 (83%), Positives = 265/292 (90%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIEKNGG+ PLTYHQFQ+I+A MD+P E +T + ATTP +DHD+KYGVPTLE
Sbjct: 178 RIIEKNGGRAPLTYHQFQAIIASMDAPPQPEPAITLDTIANATTPQYEDHDDKYGVPTLE 237
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF+ EGL PP W GGETEA+ RLERHLERKAWVASFGRPKMTPQSLLASQTGLSP+LR
Sbjct: 238 ELGFETEGLKPPIWVGGETEALARLERHLERKAWVASFGRPKMTPQSLLASQTGLSPYLR 297
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
FGCLSTRLFY+ L LYK+IKKA PPLSLHGQLLWREFFYCAAT+NPNFD+M GNPICVQ
Sbjct: 298 FGCLSTRLFYYQLTDLYKKIKKACPPLSLHGQLLWREFFYCAATKNPNFDKMAGNPICVQ 357
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
IPWD N EALAKWA+ QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW+SWEEG
Sbjct: 358 IPWDRNAEALAKWASGQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWISWEEG 417
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
MK+F+ELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD+I
Sbjct: 418 MKVFEELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDYI 469
>gi|307207594|gb|EFN85258.1| Cryptochrome-1 [Harpegnathos saltator]
Length = 558
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 249/309 (80%), Positives = 273/309 (88%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ S+ ++++ +L IIEKNGGK PLTYHQFQ++VA M+ P P VT + A
Sbjct: 171 LGISVVQRVSHTLYKLDEIIEKNGGKPPLTYHQFQNVVASMEPPEPPVLTVTSACIGSAY 230
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TPL+DDHD+ YGVPTLEELGFD EGLLPP W GGE+EA+ RLERHLERKAWVASFGRPKM
Sbjct: 231 TPLKDDHDDHYGVPTLEELGFDTEGLLPPVWVGGESEALARLERHLERKAWVASFGRPKM 290
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
TPQSLL SQTGLSP+LRFGCLSTRLFY+ L LYK+IKKA PPLSLHGQLLWREFFYCAA
Sbjct: 291 TPQSLLPSQTGLSPYLRFGCLSTRLFYYQLTDLYKKIKKAMPPLSLHGQLLWREFFYCAA 350
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
T+NPNFDRM GNPICVQIPWD N+EALAKWAN QTGFPWIDAIMTQLREEGWIHHLARHA
Sbjct: 351 TKNPNFDRMQGNPICVQIPWDKNVEALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHA 410
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGR
Sbjct: 411 VACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGR 470
Query: 301 KADPNGDFI 309
KADPNGD+I
Sbjct: 471 KADPNGDYI 479
>gi|383863231|ref|XP_003707085.1| PREDICTED: cryptochrome-1-like [Megachile rotundata]
Length = 589
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 249/309 (80%), Positives = 272/309 (88%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ S+ +K++ +L IIEKNGGK PLTYHQFQ++VA MD P P VT V A
Sbjct: 138 LGISVVQKVSHTLYKLDEIIEKNGGKPPLTYHQFQNVVACMDVPEPPVPTVTFACVGSAY 197
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TP+++DHD+ YGVPTLEELGFD EGLLPP W GGE+EA+ RLERHLERKAWVASFGRPKM
Sbjct: 198 TPVKEDHDDHYGVPTLEELGFDTEGLLPPVWVGGESEALARLERHLERKAWVASFGRPKM 257
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
TPQSLL SQTGLSP+LRFGCLSTRLFY+ L LYK+IKKA PPLSLHGQLLWREFFYCAA
Sbjct: 258 TPQSLLPSQTGLSPYLRFGCLSTRLFYYQLTDLYKKIKKAVPPLSLHGQLLWREFFYCAA 317
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
T NPNFDRM GNPICVQIPWD N+EALAKWAN QTGFPWIDAIMTQLREEGWIHHLARHA
Sbjct: 318 TNNPNFDRMQGNPICVQIPWDKNIEALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHA 377
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCP++FGR
Sbjct: 378 VACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPIRFGR 437
Query: 301 KADPNGDFI 309
KADPNGD+I
Sbjct: 438 KADPNGDYI 446
>gi|307611921|ref|NP_001182627.1| cryptochrome 2 [Bombyx mori]
gi|306416110|gb|ADM86933.1| cryptochrome 2 [Bombyx mori]
gi|306416114|gb|ADM86935.1| cryptochrome 2 [Bombyx mori]
Length = 730
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 237/306 (77%), Positives = 272/306 (88%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL 63
++ +++ +L +IIE+NGGK PLTYHQFQ+++A M P PAE +TP ++ ATTP+
Sbjct: 153 TVTSRVSHTLYKLDKIIERNGGKAPLTYHQFQALIASMPPPPPAEVTITPQMLNGATTPI 212
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
D+HD+++GVPTLEELGF+ EGL PP W GGE+EA+ RLERHLERKAWVASFGRPKMTPQ
Sbjct: 213 TDNHDDRFGVPTLEELGFETEGLKPPIWIGGESEALARLERHLERKAWVASFGRPKMTPQ 272
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SLLASQTGLSP+LRFGCLSTRLFY+ L +LYKR+K+ PPLSLHGQ+LWREFFYCAATRN
Sbjct: 273 SLLASQTGLSPYLRFGCLSTRLFYYQLTELYKRVKRVRPPLSLHGQILWREFFYCAATRN 332
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNFDRM GNPICVQIPW+ N +ALAKWAN QTG+PWIDAIM QLREEGWIHHL+RHAVAC
Sbjct: 333 PNFDRMEGNPICVQIPWEKNQDALAKWANGQTGYPWIDAIMIQLREEGWIHHLSRHAVAC 392
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMW SCSSFFQQFFHCYCPV+FGRK D
Sbjct: 393 FLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWFSCSSFFQQFFHCYCPVRFGRKTD 452
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 453 PNGDFI 458
>gi|404313305|gb|AFR54427.1| cryptochrome 2 [Mythimna separata]
Length = 757
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 239/306 (78%), Positives = 272/306 (88%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL 63
++ +++ +L +IIE+NGGK PLTYHQFQ+++A M P AEAP+T + ATTP+
Sbjct: 142 TVTSRVSHTLYKLDQIIERNGGKAPLTYHQFQALIASMPPPPKAEAPITAQTLNGATTPV 201
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
DDHD+++GVPTLEELGF+ EGL PP W GGE+EA+ RLERHLERKAWVASFGRPKMTPQ
Sbjct: 202 TDDHDDRFGVPTLEELGFETEGLKPPVWVGGESEALARLERHLERKAWVASFGRPKMTPQ 261
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SLLASQTGLSP+LRFGCLSTRLFY+ L +LYKR+K+ PPLSLHGQ+LWREFFYCAATRN
Sbjct: 262 SLLASQTGLSPYLRFGCLSTRLFYYQLTELYKRVKRVRPPLSLHGQILWREFFYCAATRN 321
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNFDRM GNPICVQIPW+ N EALAKWA+ QTG+PWIDAI+ QLREEGWIHHLARHAVAC
Sbjct: 322 PNFDRMEGNPICVQIPWEKNQEALAKWASGQTGYPWIDAIIIQLREEGWIHHLARHAVAC 381
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGRK D
Sbjct: 382 FLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGRKTD 441
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 442 PNGDFI 447
>gi|332021530|gb|EGI61895.1| Cryptochrome-1 [Acromyrmex echinatior]
Length = 671
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 246/309 (79%), Positives = 271/309 (87%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ S+ ++++ +L IIE+N GK PLTYHQFQ++VA MD P P VT + A
Sbjct: 140 LGISVVQRVSHTLYRLDEIIERNSGKPPLTYHQFQNVVAGMDPPEPPAPTVTAACIGSAY 199
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TPL+DDHD+ YGVPTLEELGFD E LLPP W GGE+EA+ RLERHLERKAWVASFGRPKM
Sbjct: 200 TPLKDDHDDHYGVPTLEELGFDTESLLPPVWVGGESEALARLERHLERKAWVASFGRPKM 259
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
TPQSLL SQTGLSP+LRFGCLSTRLFY+ L LYK+IKKA PPLSLHGQLLWREFFYCAA
Sbjct: 260 TPQSLLPSQTGLSPYLRFGCLSTRLFYYQLTDLYKKIKKAVPPLSLHGQLLWREFFYCAA 319
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
T+NPNFD+M GNPICVQIPWD N+EALAKWAN QTGFPWIDAIMTQLREEGWIHHLARHA
Sbjct: 320 TKNPNFDKMQGNPICVQIPWDKNVEALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHA 379
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGR
Sbjct: 380 VACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGR 439
Query: 301 KADPNGDFI 309
KADPNGD+I
Sbjct: 440 KADPNGDYI 448
>gi|167736303|dbj|BAG07408.1| cryptochrome-m [Riptortus pedestris]
Length = 538
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 243/291 (83%), Positives = 267/291 (91%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEE 78
IIE+NGG+ PLTYHQFQS+VA M+SP PVT +V A +P+ DDHDEKYGVPTLEE
Sbjct: 139 IIERNGGRAPLTYHQFQSVVASMESPPLPVPPVTSTVVGDAVSPISDDHDEKYGVPTLEE 198
Query: 79 LGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
LGFD EGLLP W+GGE+EA+ RLERHLERKAWVASFG+PKMTPQSLL SQTGLSP+LRF
Sbjct: 199 LGFDTEGLLPGVWQGGESEALSRLERHLERKAWVASFGKPKMTPQSLLPSQTGLSPYLRF 258
Query: 139 GCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQI 198
GCLSTRLFY+ LN LY++IKKA PPLSLHGQ+LWREFFYCAAT+NPNFDRM+GNPICVQ+
Sbjct: 259 GCLSTRLFYYQLNDLYRKIKKAVPPLSLHGQVLWREFFYCAATKNPNFDRMIGNPICVQV 318
Query: 199 PWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGM 258
PWD N EALAKWAN QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW+SWEEGM
Sbjct: 319 PWDKNPEALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWISWEEGM 378
Query: 259 KIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
K+F+ELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGRKADPNGD+I
Sbjct: 379 KVFEELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGRKADPNGDYI 429
>gi|444245671|gb|AGD94517.1| cryptochrome, partial [Solenopsis invicta]
Length = 573
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 245/309 (79%), Positives = 269/309 (87%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ S+ ++++ +L IIE+N GK PLTYHQFQ++VA M P VT + A
Sbjct: 140 LGISVVQRISHTLYKLDEIIERNSGKPPLTYHQFQNVVAGMGPPESPVPTVTAACIGSAY 199
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TPL+DDHD+ YGVPTLEELGFD E LLPP W GGE+EA+ RLERHLERKAWVASFGRPKM
Sbjct: 200 TPLKDDHDDHYGVPTLEELGFDTESLLPPVWVGGESEALARLERHLERKAWVASFGRPKM 259
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
TPQSLL SQTGLSP+LRFGCLSTRLFY+ L LYK+IKKA PPLSLHGQLLWREFFYCAA
Sbjct: 260 TPQSLLPSQTGLSPYLRFGCLSTRLFYYQLTDLYKKIKKAVPPLSLHGQLLWREFFYCAA 319
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
T+NPNFDRM GNPICVQIPWD N+EALAKWAN QTGFPWIDAIMTQLREEGWIHHLARHA
Sbjct: 320 TKNPNFDRMQGNPICVQIPWDKNVEALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHA 379
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGR
Sbjct: 380 VACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGR 439
Query: 301 KADPNGDFI 309
KADPNGD+I
Sbjct: 440 KADPNGDYI 448
>gi|406507547|gb|AFS34617.1| cryptochrome 2 [Clunio marinus]
Length = 657
Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust.
Identities = 238/292 (81%), Positives = 263/292 (90%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIEKN GK PLTYHQFQ+I+A M+ P PAEA + ++ TP+ DDHD++YGVPTLE
Sbjct: 146 KIIEKNNGKAPLTYHQFQAIIASMEPPPPAEATIAEDIIGNTRTPIDDDHDDRYGVPTLE 205
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGFD EGL PP W GGETEA+ RLERHLERKAWVASFGRPKM+PQSLLASQTGLSP+LR
Sbjct: 206 ELGFDTEGLKPPIWIGGETEALARLERHLERKAWVASFGRPKMSPQSLLASQTGLSPYLR 265
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
FGCLSTRLFY+ L LYK+IKK PPLSLHGQLLWREFFYC AT+NPNFD+M GNPICVQ
Sbjct: 266 FGCLSTRLFYYQLTDLYKKIKKTCPPLSLHGQLLWREFFYCCATKNPNFDKMSGNPICVQ 325
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
IPWD N EALAKWAN QTG+PWIDAIM+QLREEGWIHHLARHAVACFLTRG+LW+SWEEG
Sbjct: 326 IPWDKNPEALAKWANGQTGYPWIDAIMSQLREEGWIHHLARHAVACFLTRGNLWISWEEG 385
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
MK+F+ELLLDADWSVNAGMW+WLSCSSFFQQFFHCYCPVKFGRKADPNGD+I
Sbjct: 386 MKVFEELLLDADWSVNAGMWLWLSCSSFFQQFFHCYCPVKFGRKADPNGDYI 437
>gi|380017772|ref|XP_003692819.1| PREDICTED: cryptochrome-1-like [Apis florea]
Length = 571
Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust.
Identities = 249/309 (80%), Positives = 273/309 (88%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ S+ +K++ +L IIE+NG K+PLTYHQFQ++VA MD P P VT V A
Sbjct: 138 LGISVVQKVSHTLYKLDEIIERNGDKSPLTYHQFQTVVASMDPPEPPVPTVTSACVGSAY 197
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TPL++DHD+ YGVPTLEELGFD EGLLPP W GGE+EA+ RLERHLERKAWVASFGRPKM
Sbjct: 198 TPLKEDHDDHYGVPTLEELGFDTEGLLPPVWVGGESEALARLERHLERKAWVASFGRPKM 257
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
TPQSLL SQTGLSP+LRFGCLSTRLFY+ L LYK+IKKA PPLSLHGQLLWREFFYCAA
Sbjct: 258 TPQSLLPSQTGLSPYLRFGCLSTRLFYYQLTDLYKKIKKAVPPLSLHGQLLWREFFYCAA 317
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
T+NPNFDRM GNPICVQIPWD N+EALAKWAN QTGFPWIDAIMTQLREEGWIHHLARHA
Sbjct: 318 TKNPNFDRMQGNPICVQIPWDKNVEALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHA 377
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGR
Sbjct: 378 VACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGR 437
Query: 301 KADPNGDFI 309
KADPNGD+I
Sbjct: 438 KADPNGDYI 446
>gi|133754342|gb|ABO38435.1| cryptochrome 2 [Antheraea pernyi]
Length = 788
Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust.
Identities = 235/306 (76%), Positives = 270/306 (88%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL 63
++ +++ +L +IIE+NGGK PLTYHQFQ+++A M P PAEAP++ + A TP+
Sbjct: 154 NVISRVSHTLYKLDKIIERNGGKAPLTYHQFQALIASMPPPQPAEAPISIETLNGAKTPV 213
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
DHD+++GVPTLEELGF+ E L PP W GGE+EA+ RL+RHLERKAWVASFGRPKMTPQ
Sbjct: 214 SVDHDDRFGVPTLEELGFETEDLKPPMWMGGESEALARLDRHLERKAWVASFGRPKMTPQ 273
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SLLASQTGLSP+LRFGCLSTRLFY+ L +LYK+IK+ PPLSLHGQ+LWREFFYCAATRN
Sbjct: 274 SLLASQTGLSPYLRFGCLSTRLFYYQLTELYKKIKRVRPPLSLHGQILWREFFYCAATRN 333
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNFDRM GNPICVQIPW+ N EAL+KWAN QTG+PWIDAIM QLREEGWIHHLARHAVAC
Sbjct: 334 PNFDRMEGNPICVQIPWEKNQEALSKWANGQTGYPWIDAIMIQLREEGWIHHLARHAVAC 393
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+FDEL+LDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGRK D
Sbjct: 394 FLTRGDLWISWEEGMKVFDELMLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGRKTD 453
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 454 PNGDFI 459
>gi|136255185|ref|NP_001077099.1| cryptochrome 2 [Apis mellifera]
gi|133754347|gb|ABO38437.1| cryptochrome 2 [Apis mellifera]
Length = 570
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/309 (80%), Positives = 272/309 (88%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ S+ +K++ +L IIE+NG K PLTYHQFQ++VA MD P P VT V A
Sbjct: 138 LGISVVQKVSHTLYKLDEIIERNGDKPPLTYHQFQTVVASMDPPEPPVPTVTSACVGSAY 197
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TPL++DHD+ YGVPTLEELGFD EGLLPP W GGE+EA+ RLERHLERKAWVASFGRPKM
Sbjct: 198 TPLKEDHDDHYGVPTLEELGFDTEGLLPPVWVGGESEALARLERHLERKAWVASFGRPKM 257
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
TPQSLL SQTGLSP+LRFGCLSTRLFY+ L LYK+IKKA PPLSLHGQLLWREFFYCAA
Sbjct: 258 TPQSLLPSQTGLSPYLRFGCLSTRLFYYQLTDLYKKIKKAVPPLSLHGQLLWREFFYCAA 317
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
T+NPNFDRM GNPICVQIPWD N+EALAKWAN QTGFPWIDAIMTQLREEGWIHHLARHA
Sbjct: 318 TKNPNFDRMQGNPICVQIPWDKNVEALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHA 377
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGR
Sbjct: 378 VACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGR 437
Query: 301 KADPNGDFI 309
KADPNGD+I
Sbjct: 438 KADPNGDYI 446
>gi|307190470|gb|EFN74495.1| Cryptochrome-1 [Camponotus floridanus]
Length = 525
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 248/318 (77%), Positives = 272/318 (85%), Gaps = 9/318 (2%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ S+ +K++ +L IIE+N GK PLTYHQFQ+IVA M+ P P + VT + A
Sbjct: 140 LGISVVQKVSHTLYKLDEIIERNNGKPPLTYHQFQNIVASMNPPEPPVSTVTAACIGNAY 199
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TPL+DDHD+ YGVPTLEELGFD EGLLPP W GGE+EA+ RLERHLERKAWVASFGRPKM
Sbjct: 200 TPLKDDHDDHYGVPTLEELGFDTEGLLPPVWVGGESEALARLERHLERKAWVASFGRPKM 259
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR---------IKKAPPPLSLHGQLL 171
TPQSLL SQTGLSP+LRFGCLSTRLFY+ L LYK+ IKKA PPLSLHGQLL
Sbjct: 260 TPQSLLPSQTGLSPYLRFGCLSTRLFYYQLTDLYKKVQDDCNPIVIKKAVPPLSLHGQLL 319
Query: 172 WREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEG 231
WREFFYCAAT+N NFDRM GNPICVQIPWD N+EALAKWAN QTGFPWIDAIMTQLREEG
Sbjct: 320 WREFFYCAATKNSNFDRMQGNPICVQIPWDKNVEALAKWANGQTGFPWIDAIMTQLREEG 379
Query: 232 WIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFH 291
WIHHLARHAVACFLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFH
Sbjct: 380 WIHHLARHAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFH 439
Query: 292 CYCPVKFGRKADPNGDFI 309
CYCPV+FGRKADPNGD+I
Sbjct: 440 CYCPVRFGRKADPNGDYI 457
>gi|345483304|ref|XP_001606405.2| PREDICTED: cryptochrome-1 [Nasonia vitripennis]
Length = 627
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 241/309 (77%), Positives = 269/309 (87%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ ++ ++++ +L IIEKNGGK PLTYHQFQ+++A+MD P A VT + A
Sbjct: 180 LGITVVQRVSHTLYKLDEIIEKNGGKPPLTYHQFQNVIARMDPPEYPAAAVTAACIGSAY 239
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TPL+DDHD+ +GVPTLEELGFD EGL+ P W GGETEA+ RLERHLERKAWVASFGRPKM
Sbjct: 240 TPLKDDHDDFFGVPTLEELGFDTEGLMAPVWVGGETEALARLERHLERKAWVASFGRPKM 299
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
TPQSLL SQTGLSP+LRFGCLSTRLFY+ L LYK+IKK PPLSLHGQLLWREFFYCAA
Sbjct: 300 TPQSLLPSQTGLSPYLRFGCLSTRLFYYQLADLYKKIKKTIPPLSLHGQLLWREFFYCAA 359
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
T NPNFDRM GNPICVQIPWD N+ AL+KWAN QTGFPWIDAIMTQLREEGWIH LARHA
Sbjct: 360 TNNPNFDRMHGNPICVQIPWDKNVVALSKWANGQTGFPWIDAIMTQLREEGWIHQLARHA 419
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEGMK+FDELLLDADWS+NAGMWMWLSCSSFFQQFFHCYCPV+FGR
Sbjct: 420 VACFLTRGDLWISWEEGMKVFDELLLDADWSINAGMWMWLSCSSFFQQFFHCYCPVRFGR 479
Query: 301 KADPNGDFI 309
KADPNGD+I
Sbjct: 480 KADPNGDYI 488
>gi|77166866|gb|ABA62409.1| cryptochrome 2 [Danaus plexippus]
gi|357623166|gb|EHJ74426.1| cryptochrome 2 [Danaus plexippus]
Length = 742
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 236/305 (77%), Positives = 266/305 (87%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+ +++ +L IIEKNGGK PLTYHQFQ+++A M P AE ++ + +A TP+
Sbjct: 150 VTSRVSHTLYKLDDIIEKNGGKAPLTYHQFQALIASMPPPPSAEPTISLETLNRAVTPIS 209
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
D+HDE++GVPTLEELGFD EGL PP W GGE EA+ RLERHLERKAWVASFGRPKMTP+S
Sbjct: 210 DNHDERFGVPTLEELGFDTEGLKPPIWIGGENEALLRLERHLERKAWVASFGRPKMTPES 269
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNP 184
LL+SQTGLSP+LRFGCLSTRLFY+ L++LYKRIK+ PPLSLHGQ+LWREFFYCAATRNP
Sbjct: 270 LLSSQTGLSPYLRFGCLSTRLFYYQLSELYKRIKQERPPLSLHGQILWREFFYCAATRNP 329
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
NFDRM GNPICVQIPW+ N EAL KWAN QTGFPWIDAIM QLR +GWIHHLARHAVACF
Sbjct: 330 NFDRMEGNPICVQIPWEKNQEALKKWANGQTGFPWIDAIMIQLRNDGWIHHLARHAVACF 389
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADP 304
LTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGRK DP
Sbjct: 390 LTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGRKTDP 449
Query: 305 NGDFI 309
NGDFI
Sbjct: 450 NGDFI 454
>gi|134032019|ref|NP_001076794.1| cryptochrome 2 [Tribolium castaneum]
gi|133754349|gb|ABO38438.1| cryptochrome 2 [Tribolium castaneum]
gi|270008089|gb|EFA04537.1| cryptochrome 2 [Tribolium castaneum]
Length = 535
Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust.
Identities = 246/309 (79%), Positives = 273/309 (88%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ S+ +K++ +L + II++NGG+ PLTYHQF +I+A M P E PVT + A
Sbjct: 134 LGISVVQKVSHTLYHLQDIIDRNGGRAPLTYHQFLAIIACMGPPPQPEPPVTFNSLNGAH 193
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TPL DDHDEKYGVPTLEELGFD EG LPP W+GGE+EA+ RLERHLERKAWVASFGRPKM
Sbjct: 194 TPLTDDHDEKYGVPTLEELGFDTEGRLPPVWQGGESEALARLERHLERKAWVASFGRPKM 253
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
TPQSLL SQTGLSP+LRFGCLSTRLFY+ L LYK+IKKA PPLSLHGQLLWREFFYCAA
Sbjct: 254 TPQSLLPSQTGLSPYLRFGCLSTRLFYYQLTDLYKKIKKAFPPLSLHGQLLWREFFYCAA 313
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
T+NPNFD+M+GNPICVQIPWD N EALAKWAN QTGFPWIDAIMTQLREEGWIHHLARHA
Sbjct: 314 TKNPNFDKMIGNPICVQIPWDKNAEALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHA 373
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEGMK+F+ELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCP+KFGR
Sbjct: 374 VACFLTRGDLWLSWEEGMKVFEELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPIKFGR 433
Query: 301 KADPNGDFI 309
KADPNGD+I
Sbjct: 434 KADPNGDYI 442
>gi|333755446|gb|ADN94465.2| cryptochrome 2 [Helicoverpa armigera]
Length = 657
Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/306 (79%), Positives = 274/306 (89%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL 63
++ +++ +L +IIE+NGGK PLTYHQFQ+++A M P PAEAP++ ++ ATTPL
Sbjct: 156 TVTSRVSHTLYKLDQIIERNGGKAPLTYHQFQALIASMPPPPPAEAPISAQMLNGATTPL 215
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
DDHD+++GVPTLEELGF+ EGL PP W GGE+EA+ RLERHLERKAWVASFGRPKMTPQ
Sbjct: 216 NDDHDDRFGVPTLEELGFETEGLKPPVWIGGESEALARLERHLERKAWVASFGRPKMTPQ 275
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SLLASQTGLSP+LRFGCLSTRLFY+ L +LYKR+K+ PPLSLHGQ+LWREFFYCAATRN
Sbjct: 276 SLLASQTGLSPYLRFGCLSTRLFYYQLTELYKRVKRVRPPLSLHGQILWREFFYCAATRN 335
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNFDRM GNPICVQIPW+ N EALAKWA+ QTGFPWIDAIM QLREEGWIHHLARHAVAC
Sbjct: 336 PNFDRMEGNPICVQIPWEKNQEALAKWASGQTGFPWIDAIMIQLREEGWIHHLARHAVAC 395
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGRK D
Sbjct: 396 FLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGRKTD 455
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 456 PNGDFI 461
>gi|242020203|ref|XP_002430545.1| Deoxyribodipyrimidine photo-lyase, putative [Pediculus humanus
corporis]
gi|212515709|gb|EEB17807.1| Deoxyribodipyrimidine photo-lyase, putative [Pediculus humanus
corporis]
Length = 506
Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/306 (78%), Positives = 264/306 (86%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL 63
S+ K + +L IIEKNGG PLTYHQFQ+I+A + P E VT L+ + TPL
Sbjct: 131 SVVSKSSHTLYKLEHIIEKNGGNPPLTYHQFQTIIANIGPPPEPEETVTANLLEGSQTPL 190
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
DDHD KYGVPTLEELGF+ + L P W GGE+EA+ RLERHLERKAWVASFG PKMTPQ
Sbjct: 191 SDDHDNKYGVPTLEELGFETDKLKPTVWSGGESEALARLERHLERKAWVASFGHPKMTPQ 250
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SLLASQTGLSP+LRFGCLSTRLFY+ L +LYK+IKKA PPLSLHGQLLWREFFYCAAT+N
Sbjct: 251 SLLASQTGLSPYLRFGCLSTRLFYYQLVELYKKIKKAMPPLSLHGQLLWREFFYCAATKN 310
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNFD+M NPICVQIPWD N +ALAKWAN QTGFPWIDAIMTQLREEGWIHHLARHAVAC
Sbjct: 311 PNFDKMNENPICVQIPWDENAQALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHAVAC 370
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGRKAD
Sbjct: 371 FLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGRKAD 430
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 431 PNGDYI 436
>gi|386762985|gb|AFJ22639.1| cryptochrome 2 [Agrotis ipsilon]
Length = 812
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/306 (78%), Positives = 273/306 (89%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL 63
++ +++ +L +IIE+NGGK PLTYHQFQ+++A M P PAEAP++ + ATTP+
Sbjct: 180 TVTSRVSHTLYKLDQIIERNGGKAPLTYHQFQALIASMPPPPPAEAPISAKTLNGATTPV 239
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
DDHD+++GVPTLEELGF+ EGL PP W GGE+EA+ RLERHLERKAWVASFGRPKMTPQ
Sbjct: 240 TDDHDDRFGVPTLEELGFETEGLKPPVWIGGESEALARLERHLERKAWVASFGRPKMTPQ 299
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SLLASQTGLSP+LRFGCLSTRLFY+ L +LYKR+K+ PPLSLHGQ+LWREFFYCAATRN
Sbjct: 300 SLLASQTGLSPYLRFGCLSTRLFYYQLTELYKRVKRVRPPLSLHGQILWREFFYCAATRN 359
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNFDRM GNPICVQIPW+ N EALAKWA+ Q+GFPWIDAIM QLREEGWIHHLARHAVAC
Sbjct: 360 PNFDRMEGNPICVQIPWEKNQEALAKWASGQSGFPWIDAIMIQLREEGWIHHLARHAVAC 419
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGRK D
Sbjct: 420 FLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGRKTD 479
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 480 PNGDFI 485
>gi|148533563|gb|ABQ84983.1| antennal cryptochrome 2 [Spodoptera littoralis]
Length = 625
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/306 (79%), Positives = 274/306 (89%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL 63
++ +++ +L +IIE+NGGK PLTYHQFQ+++A M P PAEAP++ ++ ATTPL
Sbjct: 157 TVTSRVSHTLYKLDQIIERNGGKAPLTYHQFQALIASMPPPPPAEAPISAQMLNGATTPL 216
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
DDHD+++GVPTLEELGF+ EGL PP W GGE+EA+ RLERHLERKAWVASFGRPKMTPQ
Sbjct: 217 TDDHDDRFGVPTLEELGFETEGLKPPVWIGGESEALARLERHLERKAWVASFGRPKMTPQ 276
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SLLASQTGLSP+LRFGCLSTRLFY+ L +LYKR+K+ PPLSLHGQ+LWREFFYCAATRN
Sbjct: 277 SLLASQTGLSPYLRFGCLSTRLFYYQLTELYKRVKRVRPPLSLHGQILWREFFYCAATRN 336
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNFDRM GNPICVQIPW+ N EALAKWA+ QTGFPWIDAIM QLREEGWIHHLARHAVAC
Sbjct: 337 PNFDRMEGNPICVQIPWEKNQEALAKWASGQTGFPWIDAIMIQLREEGWIHHLARHAVAC 396
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV+FGRK D
Sbjct: 397 FLTRGDLWISWEEGMKVFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVRFGRKTD 456
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 457 PNGDFI 462
>gi|321471119|gb|EFX82092.1| CRY-M [Daphnia pulex]
Length = 553
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 232/298 (77%), Positives = 261/298 (87%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKY 71
+L ++IIEKNGGK PLTY QFQ+I+A +D+P P E+ +T + + TP+ + D+++
Sbjct: 139 TLYHPQKIIEKNGGKAPLTYRQFQNIIASVDAPPPPESDITFESIGRGYTPMDESMDDRF 198
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
VPTLEELGFD +GL+P W GGETEA+ RLERHLERKAWVASFGRPKMTPQSLLASQTG
Sbjct: 199 SVPTLEELGFDTDGLMPAVWHGGETEALTRLERHLERKAWVASFGRPKMTPQSLLASQTG 258
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
LSP+LRFGCLS RLF+ L LYK+IKKA PPLSLHGQ+LWREFFYCAAT NPNFD+M+G
Sbjct: 259 LSPYLRFGCLSVRLFHQQLTNLYKKIKKAQPPLSLHGQVLWREFFYCAATNNPNFDKMIG 318
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
NPICVQIPWD N EALAKWAN QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW
Sbjct: 319 NPICVQIPWDSNAEALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 378
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFF QFFHCYCPV+FGRK DPNGDFI
Sbjct: 379 ISWEEGMKVFEELLLDADWSVNAGTWMWLSCSSFFHQFFHCYCPVRFGRKVDPNGDFI 436
>gi|157130453|ref|XP_001655724.1| DNA photolyase [Aedes aegypti]
gi|108881984|gb|EAT46209.1| AAEL002602-PA [Aedes aegypti]
Length = 321
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/292 (81%), Positives = 258/292 (88%), Gaps = 2/292 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIEKNGG+ PLTYHQFQ+I+A MD+P E +T + ATTP +DHD+KYGVPTLE
Sbjct: 17 RIIEKNGGRAPLTYHQFQAIIASMDAPPQPEPAITLDTIANATTPQYEDHDDKYGVPTLE 76
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF+ EGL P W GETEA+ RLERHLERKAWVASFGRPKMTPQSLLA QTGLSP+LR
Sbjct: 77 ELGFETEGLKPLIWVRGETEALARLERHLERKAWVASFGRPKMTPQSLLARQTGLSPYLR 136
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
FGCLSTRLFY+ L LYK+IKKA PPLSL+GQLLWREFFYCAAT+NPNFD+M GNPICVQ
Sbjct: 137 FGCLSTRLFYYQLTDLYKKIKKACPPLSLYGQLLWREFFYCAATKNPNFDKMAGNPICVQ 196
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
I WD N EALAKWA+ QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW+S EEG
Sbjct: 197 ISWDRNAEALAKWASGQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWISCEEG 256
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
MK+F+ELLLDADWSVNAG MWLSCSSFFQQFFHCYCPVKFGRKADPNGD+I
Sbjct: 257 MKVFEELLLDADWSVNAG--MWLSCSSFFQQFFHCYCPVKFGRKADPNGDYI 306
>gi|225875100|emb|CAQ86665.1| cryptochrome [Euphausia superba]
Length = 545
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/309 (72%), Positives = 258/309 (83%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
M + K + +L +II KNGGK PLTY FQ++++ M+ P +PVT V A
Sbjct: 124 MGIQVIIKTSHTLYKLEKIISKNGGKLPLTYKTFQNVLSTMEPPPLPASPVTVRDVGDAF 183
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TP+ +DHDEKYGVPTLEELGF+ E L P WKGGE+EA+ RLE HLERKAWVASFGRPKM
Sbjct: 184 TPIDEDHDEKYGVPTLEELGFETENLAPSIWKGGESEALARLEHHLERKAWVASFGRPKM 243
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
TPQSL S+TGLSP+LRFGCLS R F+ +LN LY++IKK+P PLSLHGQLLWREF+Y AA
Sbjct: 244 TPQSLYPSRTGLSPYLRFGCLSARRFFAELNDLYRKIKKSPAPLSLHGQLLWREFYYTAA 303
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
T NP FD M GNPICVQIPWD N EALAKWA+ +TGFPWIDAIM+QLR+EGWIH++ARHA
Sbjct: 304 TNNPKFDHMEGNPICVQIPWDKNAEALAKWAHGRTGFPWIDAIMSQLRKEGWIHNVARHA 363
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLWVSWEEGMK+FDELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV++GR
Sbjct: 364 VACFLTRGDLWVSWEEGMKVFDELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVRYGR 423
Query: 301 KADPNGDFI 309
KADPNGD+I
Sbjct: 424 KADPNGDYI 432
>gi|170070074|ref|XP_001869456.1| cryptochrome 2 [Culex quinquefasciatus]
gi|167866000|gb|EDS29383.1| cryptochrome 2 [Culex quinquefasciatus]
Length = 828
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 220/292 (75%), Positives = 242/292 (82%), Gaps = 20/292 (6%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIEKN G+ PLTY+QFQ+I+A MD+P E +T + +A TP DDHD+KYGVPTLE
Sbjct: 182 RIIEKNNGRAPLTYNQFQAIIASMDAPPQPEPAITLAAIGRAVTPQCDDHDDKYGVPTLE 241
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF+ EGL PP W GGETEA+ RLERHL +QTGLSP+LR
Sbjct: 242 ELGFETEGLKPPIWVGGETEALARLERHL--------------------GTQTGLSPYLR 281
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
FGCLSTRLFY+ L LYK+IKKA PPLSLHGQL WREFFYCAAT+NPNFD+M GNPICVQ
Sbjct: 282 FGCLSTRLFYYQLTDLYKKIKKAYPPLSLHGQLFWREFFYCAATKNPNFDKMAGNPICVQ 341
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
IPWD N EALAKWA+ QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW+SWEEG
Sbjct: 342 IPWDRNAEALAKWASGQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWISWEEG 401
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
MK+F+ELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD+I
Sbjct: 402 MKVFEELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDYI 453
>gi|449482006|ref|XP_002196554.2| PREDICTED: cryptochrome-1 [Taeniopygia guttata]
Length = 715
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 257/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ+++++M+ P E PV TP ++++ TTP+
Sbjct: 222 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISRME---PLEMPVETITPEVMKKCTTPVS 278
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 279 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 338
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 339 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 398
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 399 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 458
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 459 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 518
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 519 PNGDYI 524
>gi|326912139|ref|XP_003202411.1| PREDICTED: cryptochrome-1 [Meleagris gallopavo]
Length = 611
Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 257/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ+++++M+ P E PV TP ++++ TTP+
Sbjct: 117 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISRME---PLEMPVETITPEVMQKCTTPVS 173
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 174 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 233
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 234 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 293
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 294 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 353
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 354 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 413
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 414 PNGDYI 419
>gi|82091801|sp|Q6ZZY0.1|CRY1_SYLBO RecName: Full=Cryptochrome-1
gi|45535501|emb|CAG14931.1| cryptochrome 1 [Sylvia borin]
Length = 620
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 257/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ+++++M+ P E PV TP ++++ TTP+
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISRME---PLEMPVETITPEVMKKCTTPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|45383636|ref|NP_989576.1| cryptochrome-1 [Gallus gallus]
gi|82104700|sp|Q8QG61.1|CRY1_CHICK RecName: Full=Cryptochrome-1
gi|19550963|gb|AAK61385.1| cryptochrome 1 [Gallus gallus]
Length = 621
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 257/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ+++++M+ P E PV TP ++++ TTP+
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISRME---PLEMPVETITPEVMQKCTTPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|426374041|ref|XP_004053891.1| PREDICTED: cryptochrome-1 [Gorilla gorilla gorilla]
Length = 583
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLETPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|390979651|ref|NP_001070765.2| cryptochrome 1a [Danio rerio]
gi|141796163|gb|AAI34839.1| Cry1a protein [Danio rerio]
gi|190337408|gb|AAI63354.1| Cryptochrome 1a [Danio rerio]
Length = 619
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/303 (71%), Positives = 253/303 (83%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
+++ +L +IIE NGG++PLTY +FQ+++++M++ +T ++ TTPL DDH
Sbjct: 127 RISHTLYDLDKIIELNGGQSPLTYKRFQTLISRMEAVETPAETITAEVMGPCTTPLSDDH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
DEK+GVP+LEELGFD EGL W GGETEA+ RLERHLERKAWVA+F RP+M SLLA
Sbjct: 187 DEKFGVPSLEELGFDTEGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT NP F
Sbjct: 247 SPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAATNNPRF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 307 DKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 367 RGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVSFGRRTDPNG 426
Query: 307 DFI 309
D+I
Sbjct: 427 DYI 429
>gi|110962429|gb|ABH03083.1| cryptochrome 1b [Sylvia borin]
Length = 587
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 257/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ+++++M+ P E PV TP ++++ TTP+
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISRME---PLEMPVETITPEVMKKCTTPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|147901097|ref|NP_001081129.1| cryptochrome 1 (photolyase-like) [Xenopus laevis]
gi|47938667|gb|AAH72120.1| Cry1-A protein [Xenopus laevis]
Length = 616
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KMD P E PV T ++ + TTP+
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMD---PLEIPVETITAEVMEKCTTPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD EGL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTEGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASTTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMDGNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FG++ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGKRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|297692835|ref|XP_002823736.1| PREDICTED: cryptochrome-1 [Pongo abelii]
Length = 586
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|291389942|ref|XP_002711467.1| PREDICTED: cryptochrome 1 (photolyase-like) [Oryctolagus cuniculus]
Length = 587
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTP+
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSDVIEKCTTPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA QTGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGQTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|115528160|gb|AAI24763.1| Cryptochrome 1a [Danio rerio]
Length = 619
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/303 (71%), Positives = 253/303 (83%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
+++ +L +IIE NGG++PLTY +FQ+++++M++ +T ++ TTPL DDH
Sbjct: 127 RISHTLYDLDKIIELNGGQSPLTYKRFQTLISRMEAVETPAETITAEVMGPCTTPLSDDH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
DEK+GVP+LEELGFD EGL W GGETEA+ RLERHLERKAWVA+F RP+M SLLA
Sbjct: 187 DEKFGVPSLEELGFDTEGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT NP F
Sbjct: 247 SPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAATNNPRF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 307 DKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 367 RGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVSFGRRTDPNG 426
Query: 307 DFI 309
D+I
Sbjct: 427 DYI 429
>gi|73969270|ref|XP_862753.1| PREDICTED: cryptochrome-1 isoform 2 [Canis lupus familiaris]
Length = 587
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T +V + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVVEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|404312667|ref|NP_001017311.2| cryptochrome 1 (photolyase-like) [Xenopus (Silurana) tropicalis]
gi|170287804|gb|AAI61038.1| Unknown (protein for MGC:184712) [Xenopus (Silurana) tropicalis]
Length = 618
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTP+
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITAEVMEKCTTPVL 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD EGL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTEGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASTTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|291290511|dbj|BAI82611.1| cryptochrome 1 [Xenopus (Silurana) tropicalis]
Length = 605
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTP+
Sbjct: 120 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITAEVMEKCTTPVL 176
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD EGL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 177 DDHDEKYGVPSLEELGFDTEGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 236
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 237 LLASTTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 296
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 297 PRFDKMEGNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 356
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 357 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 416
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 417 PNGDYI 422
>gi|296212792|ref|XP_002752992.1| PREDICTED: cryptochrome-1 [Callithrix jacchus]
Length = 586
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|302564841|ref|NP_001181088.1| cryptochrome-1 [Macaca mulatta]
gi|402887532|ref|XP_003907145.1| PREDICTED: cryptochrome-1 [Papio anubis]
gi|355564646|gb|EHH21146.1| hypothetical protein EGK_04148 [Macaca mulatta]
gi|355786488|gb|EHH66671.1| hypothetical protein EGM_03711 [Macaca fascicularis]
gi|380809804|gb|AFE76777.1| cryptochrome-1 [Macaca mulatta]
gi|383415927|gb|AFH31177.1| cryptochrome-1 [Macaca mulatta]
gi|384945408|gb|AFI36309.1| cryptochrome-1 [Macaca mulatta]
Length = 586
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|410965445|ref|XP_003989258.1| PREDICTED: cryptochrome-1 [Felis catus]
Length = 587
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T L+ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSELIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|4758072|ref|NP_004066.1| cryptochrome-1 [Homo sapiens]
gi|332241714|ref|XP_003270025.1| PREDICTED: cryptochrome-1 [Nomascus leucogenys]
gi|74735764|sp|Q16526.1|CRY1_HUMAN RecName: Full=Cryptochrome-1
gi|1304107|dbj|BAA12068.1| photolyase [Homo sapiens]
gi|1313902|dbj|BAA12710.1| photolyase homolog [Homo sapiens]
gi|22539647|gb|AAH30519.1| Cryptochrome 1 (photolyase-like) [Homo sapiens]
gi|119618201|gb|EAW97795.1| cryptochrome 1 (photolyase-like), isoform CRA_a [Homo sapiens]
gi|119618203|gb|EAW97797.1| cryptochrome 1 (photolyase-like), isoform CRA_a [Homo sapiens]
gi|121647009|gb|ABM64209.1| photolyase-like cryptochrome 1 [Homo sapiens]
gi|158254536|dbj|BAF83241.1| unnamed protein product [Homo sapiens]
gi|261858374|dbj|BAI45709.1| cryptochrome 1 [synthetic construct]
gi|325464291|gb|ADZ15916.1| cryptochrome 1 (photolyase-like) [synthetic construct]
Length = 586
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|114646730|ref|XP_509339.2| PREDICTED: cryptochrome-1 [Pan troglodytes]
gi|397525251|ref|XP_003832588.1| PREDICTED: cryptochrome-1 [Pan paniscus]
gi|410216796|gb|JAA05617.1| cryptochrome 1 (photolyase-like) [Pan troglodytes]
gi|410256668|gb|JAA16301.1| cryptochrome 1 (photolyase-like) [Pan troglodytes]
gi|410295158|gb|JAA26179.1| cryptochrome 1 (photolyase-like) [Pan troglodytes]
gi|410354849|gb|JAA44028.1| cryptochrome 1 (photolyase-like) [Pan troglodytes]
Length = 586
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|311255201|ref|XP_003126127.1| PREDICTED: cryptochrome-1 [Sus scrofa]
Length = 588
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|15341190|gb|AAK94665.1| cryptochrome 1 [Xenopus laevis]
Length = 616
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KMD P E PV T ++ + TTP+
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMD---PLEIPVETITAEVMEKCTTPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD EGL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTEGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASTTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PCFDKMDGNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FG++ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGKRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|403275987|ref|XP_003929699.1| PREDICTED: cryptochrome-1 [Saimiri boliviensis boliviensis]
Length = 586
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|355681092|gb|AER96734.1| cryptochrome 1 [Mustela putorius furo]
Length = 449
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/295 (74%), Positives = 249/295 (84%), Gaps = 7/295 (2%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLRDDHDEKYGVPT 75
IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL DDHDEKYGVP+
Sbjct: 1 IIELNGGQPPLTYKRFQTLISKME---PLEMPVETITSEVIEKCTTPLSDDHDEKYGVPS 57
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPF 135
LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP+
Sbjct: 58 LEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASSTGLSPY 117
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP FD+M GNPI
Sbjct: 118 LRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPI 177
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
CVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SW
Sbjct: 178 CVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISW 237
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
EEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNGD+I
Sbjct: 238 EEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 292
>gi|417403044|gb|JAA48347.1| Putative deoxyribodipyrimidine photolyase/cryptochrome [Desmodus
rotundus]
Length = 587
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|157427956|ref|NP_001098885.1| cryptochrome-1 [Bos taurus]
gi|157278893|gb|AAI34487.1| CRY1 protein [Bos taurus]
Length = 587
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|193211372|ref|NP_001123207.1| cryptochrome-1 [Ovis aries]
gi|152940829|gb|ABS44879.1| cryptochrome 1 [Ovis aries]
Length = 587
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVMEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|449276417|gb|EMC84949.1| Cryptochrome-1, partial [Columba livia]
Length = 570
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/306 (71%), Positives = 256/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY ++Q+++++M+ P E PV TP ++ + TTP+
Sbjct: 77 RISHTLYDLDKIIELNGGQPPLTYKRYQTLISRME---PLEMPVETITPEVMEKCTTPVS 133
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 134 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 193
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 194 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 253
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 254 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 313
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEG+K+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 314 FLTRGDLWISWEEGVKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 373
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 374 PNGDYI 379
>gi|345326794|ref|XP_001508613.2| PREDICTED: cryptochrome-1-like [Ornithorhynchus anatinus]
Length = 721
Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust.
Identities = 217/303 (71%), Positives = 252/303 (83%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
+++ +L +IIE NGG+ PLTY +FQ+++++MD + +T ++ + TPL DDH
Sbjct: 232 RISHTLYELDKIIELNGGQPPLTYKRFQTLISRMDPLAMPVETITAEVMGKCMTPLSDDH 291
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
DEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLA
Sbjct: 292 DEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLA 351
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP F
Sbjct: 352 SPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATSNPRF 411
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 412 DKMEGNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 471
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 472 RGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNG 531
Query: 307 DFI 309
D+I
Sbjct: 532 DYI 534
>gi|149067374|gb|EDM17107.1| cryptochrome 1 (photolyase-like) [Rattus norvegicus]
Length = 555
Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAP---VTPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++V+KM+ P E P +T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKME---PLEMPADTITSDVIGKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|8698584|dbj|BAA96846.1| cryptochrome 1a [Danio rerio]
Length = 556
Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/303 (71%), Positives = 253/303 (83%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
+++ +L +IIE NGG++PLTY +FQ+++++M++ +T ++ TTPL DDH
Sbjct: 127 RISHTLYDLDKIIELNGGQSPLTYKRFQTLISRMEAVVTPAETITAEVMGPCTTPLSDDH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
DEK+GVP+LEELGFD EGL W GGETEA+ RLERHLERKAWVA+F RP+M SLLA
Sbjct: 187 DEKFGVPSLEELGFDTEGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT NP F
Sbjct: 247 SPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAATNNPRF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 307 DKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 367 RGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVSFGRRTDPNG 426
Query: 307 DFI 309
D+I
Sbjct: 427 DYI 429
>gi|47215847|emb|CAG02310.1| unnamed protein product [Tetraodon nigroviridis]
Length = 606
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPL---LVRQATTPLR 64
K++ +L +IIE NGG+ PLTY +FQ+++++MD P E PV L L+ + TP+
Sbjct: 94 KISHTLYDLDKIIELNGGQPPLTYKRFQTLISRMD---PPEMPVEMLSGNLMGRCVTPIS 150
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
+DH EK+GVP+LEELGFDIEGL W GGETEA+ R+ERHLERKAWVA+F RP+M S
Sbjct: 151 EDHGEKFGVPSLEELGFDIEGLPSAVWPGGETEALTRIERHLERKAWVANFERPRMNANS 210
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LY+++KK PPLSL+GQLLWREFFY AAT N
Sbjct: 211 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNTSPPLSLYGQLLWREFFYTAATNN 270
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICV+IPWD NMEALAKWA A+TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 271 PRFDKMEGNPICVRIPWDRNMEALAKWAEAKTGFPWIDAIMTQLRQEGWIHHLARHAVAC 330
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 331 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 390
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 391 PNGDFI 396
>gi|75048080|sp|Q8WP19.1|CRY1_MACFA RecName: Full=Cryptochrome-1
gi|17026058|dbj|BAB72089.1| cryptochrome 1 [Macaca fascicularis]
Length = 586
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/306 (71%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++K+ + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKRNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|80861398|ref|NP_942045.2| cryptochrome-1 [Rattus norvegicus]
gi|118572250|sp|Q32Q86.1|CRY1_RAT RecName: Full=Cryptochrome-1
gi|78395116|gb|AAI07678.1| Cryptochrome 1 (photolyase-like) [Rattus norvegicus]
Length = 588
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAP---VTPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++V+KM+ P E P +T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKME---PLEMPADTITSDVIGKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|301784579|ref|XP_002927704.1| PREDICTED: cryptochrome-1-like [Ailuropoda melanoleuca]
gi|281347021|gb|EFB22605.1| hypothetical protein PANDA_017512 [Ailuropoda melanoleuca]
Length = 587
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|260829102|ref|XP_002609501.1| hypothetical protein BRAFLDRAFT_230263 [Branchiostoma floridae]
gi|229294858|gb|EEN65511.1| hypothetical protein BRAFLDRAFT_230263 [Branchiostoma floridae]
Length = 514
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/292 (75%), Positives = 246/292 (84%), Gaps = 1/292 (0%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEE 78
II+ NGG+ PLTY +FQ+I++KMD P +T V TTP+RDDHDEK+GVP+LEE
Sbjct: 140 IIDVNGGQPPLTYKRFQAILSKMDPPDQPVDSITASTVDNLTTPIRDDHDEKFGVPSLEE 199
Query: 79 LGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
LGFD + L P W GGETEA+ RLERHLERKAWVASF RPKMT SLLAS TGLSP+LRF
Sbjct: 200 LGFDTDNLNPVVWPGGETEALTRLERHLERKAWVASFERPKMTASSLLASPTGLSPYLRF 259
Query: 139 GCLSTRLFYHDLNKLYKRIKKAP-PPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
GCLS RLFY L +LYK++K++ PPLSL+GQLLWREFFY AAT NPNFD+M+ N ICVQ
Sbjct: 260 GCLSPRLFYKKLTELYKKVKRSNHPPLSLYGQLLWREFFYTAATNNPNFDKMVNNTICVQ 319
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
IPWD N EALAKWA QTGFPWIDAIM QL++EGWIHHLARHAVACFLTRGDLW+SWEEG
Sbjct: 320 IPWDKNPEALAKWAEGQTGFPWIDAIMAQLQQEGWIHHLARHAVACFLTRGDLWISWEEG 379
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
MK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFH YCPV FGR+ DPNGDFI
Sbjct: 380 MKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHVYCPVNFGRRTDPNGDFI 431
>gi|33333729|gb|AAQ11980.1| cryptochrome 1 [Rattus norvegicus]
Length = 588
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAP---VTPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++V+KM+ P E P +T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKME---PLEMPADTITSDVIGKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|327272394|ref|XP_003220970.1| PREDICTED: cryptochrome-1-like isoform 1 [Anolis carolinensis]
Length = 621
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/306 (71%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ+++++M+ P E PV T ++ + TTP+
Sbjct: 127 RISHTLYELDKIIELNGGQPPLTYKRFQTLISRME---PLEIPVETITAEVMSKCTTPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|405952216|gb|EKC20054.1| Cleavage stimulation factor 77 kDa subunit [Crassostrea gigas]
Length = 1237
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 248/303 (81%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
K + +L ++II NGG PLTY +FQS++AKM++PS E + + + TP+ +DH
Sbjct: 822 KTSHTLYDLQKIIAMNGGSPPLTYKRFQSVLAKMEAPSEPEETINSGFLVKTKTPIAEDH 881
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
D+KYGVPTLEELGFD EGL P + GGE EA+ RLERHLERKAWVASF RPKM+ QSL
Sbjct: 882 DDKYGVPTLEELGFDTEGLGPAVFHGGEAEALTRLERHLERKAWVASFERPKMSQQSLFP 941
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
SQ LSP+LRFGCLS RLFY L +LY+++KK PPLSLHGQLLWREFFY AT NPNF
Sbjct: 942 SQNVLSPYLRFGCLSARLFYWKLRELYRKVKKRKDPPLSLHGQLLWREFFYTVATNNPNF 1001
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
DRM NP+CVQIPWD N EALAKWA +TGFPWIDAIM QLR+ GWIH+LARH+VACFLT
Sbjct: 1002 DRMKDNPLCVQIPWDKNPEALAKWAEGKTGFPWIDAIMMQLRQTGWIHNLARHSVACFLT 1061
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV FG++ADP G
Sbjct: 1062 RGDLWISWEEGMKVFEELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVGFGKRADPTG 1121
Query: 307 DFI 309
DFI
Sbjct: 1122 DFI 1124
>gi|344266586|ref|XP_003405361.1| PREDICTED: cryptochrome-1-like [Loxodonta africana]
Length = 583
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIGKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|296487421|tpg|DAA29534.1| TPA: cryptochrome 1 (photolyase-like) [Bos taurus]
Length = 543
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|6681031|ref|NP_031797.1| cryptochrome-1 [Mus musculus]
gi|81882230|sp|P97784.1|CRY1_MOUSE RecName: Full=Cryptochrome-1
gi|5081813|gb|AAD39548.1|AF156986_1 cryptochrome 1 [Mus musculus]
gi|1816439|dbj|BAA19175.1| photolyase/blue-light receptor homolog [Mus musculus]
gi|18380944|gb|AAH22174.1| Cryptochrome 1 (photolyase-like) [Mus musculus]
gi|55716088|gb|AAH85499.1| Cryptochrome 1 (photolyase-like) [Mus musculus]
gi|74194028|dbj|BAE36931.1| unnamed protein product [Mus musculus]
gi|148689469|gb|EDL21416.1| cryptochrome 1 (photolyase-like) [Mus musculus]
Length = 606
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/306 (71%), Positives = 254/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAP---VTPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++V+KM+ P E P +T ++ + TPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKME---PLEMPADTITSDVIGKCMTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|432943720|ref|XP_004083252.1| PREDICTED: cryptochrome-1-like [Oryzias latipes]
Length = 624
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/309 (70%), Positives = 256/309 (82%), Gaps = 7/309 (2%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATT 61
+ +++ +L +IIE NGG++PLTY +FQ+++++MD P E PV T ++ + TT
Sbjct: 124 VTVRVSHTLYDLDQIIELNGGQSPLTYKRFQTLISRMD---PVEMPVESITAEVMGKCTT 180
Query: 62 PLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMT 121
PL DDHDEK+GVP+LEELGFD EGL W GGETEA+ RLERHLERKAWVA+F RP+M
Sbjct: 181 PLSDDHDEKFGVPSLEELGFDTEGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMN 240
Query: 122 PQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAA 180
SLLAS TGLSP+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AA
Sbjct: 241 ANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAA 300
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
T NP FD+M NPICVQ+PWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHA
Sbjct: 301 TNNPCFDKMESNPICVQMPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHA 360
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR
Sbjct: 361 VACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGR 420
Query: 301 KADPNGDFI 309
+ DPNGD+I
Sbjct: 421 RTDPNGDYI 429
>gi|348529122|ref|XP_003452063.1| PREDICTED: cryptochrome-1-like [Oreochromis niloticus]
Length = 630
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 217/296 (73%), Positives = 250/296 (84%), Gaps = 7/296 (2%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAP---VTPLLVRQATTPLRDDHDEKYGVP 74
+IIE NGG++PLTY +FQ+++++MD P E P +T ++ + TTPL +DHDEK+GVP
Sbjct: 137 KIIELNGGQSPLTYKRFQTLISRMD---PVEVPAESITAEIMGKCTTPLSEDHDEKFGVP 193
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGFD EGL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP
Sbjct: 194 SLEELGFDTEGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSP 253
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT NP FD+M NP
Sbjct: 254 YLRFGCLSCRLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAATNNPCFDKMESNP 313
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
ICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 314 ICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 373
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNGD+I
Sbjct: 374 WEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 429
>gi|354486342|ref|XP_003505340.1| PREDICTED: LOW QUALITY PROTEIN: cryptochrome-1-like [Cricetulus
griseus]
Length = 583
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 217/303 (71%), Positives = 251/303 (82%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
+++ +L +IIE NGG+ PLTY +FQ++V+KM+ +T ++ + TPL DDH
Sbjct: 123 RISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEPLEMPAETITSDVIGKCMTPLSDDH 182
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
DEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLA
Sbjct: 183 DEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLA 242
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP F
Sbjct: 243 SPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRF 302
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 303 DKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 362
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 363 RGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNG 422
Query: 307 DFI 309
D+I
Sbjct: 423 DYI 425
>gi|334348060|ref|XP_003342014.1| PREDICTED: LOW QUALITY PROTEIN: cryptochrome-1-like [Monodelphis
domestica]
Length = 585
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 216/303 (71%), Positives = 253/303 (83%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
+++ +L +IIE NGG+ PLTY +FQ++++KM+ + +TP ++ + TPL D+H
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLATPVETITPEVMHKCVTPLSDEH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
DEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLA
Sbjct: 187 DEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP F
Sbjct: 247 SPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 307 DKMEGNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 367 RGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNG 426
Query: 307 DFI 309
D+I
Sbjct: 427 DYI 429
>gi|327272396|ref|XP_003220971.1| PREDICTED: cryptochrome-1-like isoform 2 [Anolis carolinensis]
Length = 589
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/306 (71%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ+++++M+ P E PV T ++ + TTP+
Sbjct: 127 RISHTLYELDKIIELNGGQPPLTYKRFQTLISRME---PLEIPVETITAEVMSKCTTPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|348553110|ref|XP_003462370.1| PREDICTED: cryptochrome-1-like [Cavia porcellus]
Length = 675
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/306 (72%), Positives = 254/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T +V + TPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVVEKCVTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLWVSWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWVSWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|395819912|ref|XP_003783322.1| PREDICTED: cryptochrome-1 [Otolemur garnettii]
Length = 587
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/306 (71%), Positives = 254/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEIIEKCTTPLF 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCP FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPASFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|118572249|sp|Q5IZC5.2|CRY1_ERIRU RecName: Full=Cryptochrome-1
gi|57233429|gb|AAW48290.1| cryptochrome-1a [Erithacus rubecula]
Length = 620
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/306 (71%), Positives = 256/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ+++++M+ P E PV TP ++++ TTP+
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISRME---PLEMPVETITPEVMKKCTTPVF 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKA VA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKASVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|302745152|gb|ADL62679.1| cryptochrome 1a [Phreatichthys andruzzii]
Length = 623
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 252/303 (83%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
+++ +L +IIE NGG++PLTY +FQ+++++M++ +T ++ TTP+ DDH
Sbjct: 127 RISHTLYDLDKIIELNGGQSPLTYKRFQTLISRMEAVETPAETITAEVMGTCTTPVSDDH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
DEK+GVP+LEELGFD EGL W GGETEA+ RLERHLERKAWVA+F RP+M SLLA
Sbjct: 187 DEKFGVPSLEELGFDTEGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS +LFY L LY+++KK + PPLSL+GQLLWREFFY AT NP F
Sbjct: 247 SPTGLSPYLRFGCLSCQLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTTATNNPRF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 307 DKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 367 RGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVSFGRRTDPNG 426
Query: 307 DFI 309
D+I
Sbjct: 427 DYI 429
>gi|57233431|gb|AAW48291.1| cryptochrome-1b [Erithacus rubecula]
Length = 587
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/306 (71%), Positives = 256/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ+++++M+ P E PV TP ++++ TTP+
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISRME---PLEMPVETITPEVMKKCTTPVF 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKA VA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKASVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|149742994|ref|XP_001499263.1| PREDICTED: cryptochrome-1 [Equus caballus]
Length = 587
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/306 (71%), Positives = 254/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS GLSP+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPAGLSPYLRFGCLSCRLFYFRLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|116256289|gb|ABJ90474.1| cryptochrome 1 [Equus caballus]
Length = 378
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/306 (71%), Positives = 254/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 74 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 130
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 131 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 190
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS GLSP+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 191 LLASPAGLSPYLRFGCLSCRLFYFRLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAATNN 250
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 251 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 310
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 311 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 370
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 371 PNGDYI 376
>gi|63100688|gb|AAH95305.1| Cry2a protein [Danio rerio]
Length = 658
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 252/303 (83%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
K + +L + +IIE NGG+ PLTY +FQ+++++MD P ++ ++ TP+ +DH
Sbjct: 127 KTSHTLYNLDKIIELNGGQPPLTYKRFQTLISRMDPPEMPVETLSNSIMGCCVTPVSEDH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+KYGVP+LEELGFDIEGL W GGETEA+ R+ERHLERKAWVA+F RP+M SLLA
Sbjct: 187 GDKYGVPSLEELGFDIEGLPSAVWPGGETEALTRIERHLERKAWVANFERPRMNANSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT NP F
Sbjct: 247 SPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKTSTPPLSLYGQLLWREFFYTAATTNPRF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNPICV+IPWD N EALAKWA A+TGFPWIDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 307 DKMEGNPICVRIPWDKNPEALAKWAEAKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 367 RGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNG 426
Query: 307 DFI 309
DFI
Sbjct: 427 DFI 429
>gi|348517126|ref|XP_003446086.1| PREDICTED: cryptochrome-1-like [Oreochromis niloticus]
Length = 800
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 252/303 (83%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
K++ +L +IIE NGG+ PLTY +FQ++++++D P +T L+ + TP+ +DH
Sbjct: 127 KISHTLYDLDKIIELNGGQPPLTYKRFQTLISRLDPPEMPVEMLTDTLMGRCVTPVSEDH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+KYGVP+LEELGFD EGL W GGETEA+ R+ERHLERKAWVA+F RP+M SLLA
Sbjct: 187 GDKYGVPSLEELGFDTEGLPSAVWPGGETEALTRIERHLERKAWVANFERPRMNANSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT NP F
Sbjct: 247 SPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAATNNPRF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNPICV+IPWD N EALAKWA A+TGFPWIDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 307 DKMEGNPICVRIPWDKNPEALAKWAEAKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 367 RGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNG 426
Query: 307 DFI 309
DFI
Sbjct: 427 DFI 429
>gi|443710319|gb|ELU04573.1| hypothetical protein CAPTEDRAFT_178510 [Capitella teleta]
Length = 597
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 216/304 (71%), Positives = 253/304 (83%), Gaps = 3/304 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSP-SPAEAPVTPLLVRQATTPLRDD 66
K + +L + ++I++KN G PLTY +FQ I+A+MD P P EA VT + + TP+ D
Sbjct: 142 KTSHTLFNLQKILDKNSGVPPLTYKRFQRILARMDPPPRPVEA-VTSVTIGSVVTPINSD 200
Query: 67 HDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
HD++YGVPTLE+LGFD + L WKGGETEA+ RL+RHLERKAWVASF +PKMTPQSL+
Sbjct: 201 HDDQYGVPTLEDLGFDTDNLEAAVWKGGETEALSRLDRHLERKAWVASFEKPKMTPQSLM 260
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPP-PLSLHGQLLWREFFYCAATRNPN 185
AS TGLSP+LRFGCLSTRLFY L LY+++KK PLS+HGQLLWREFFY AAT NP
Sbjct: 261 ASPTGLSPYLRFGCLSTRLFYWRLTDLYRKVKKRTDMPLSIHGQLLWREFFYTAATNNPK 320
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
FDRM+GNPICVQ+PWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARH+VACFL
Sbjct: 321 FDRMVGNPICVQVPWDKNPEALAKWAECKTGFPWIDAIMTQLRQEGWIHHLARHSVACFL 380
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
TRGDLW+SWEEGMK+F+E LLDADWS+NAGMW+WLSCSSFFQQFFH YCP FGRKADP
Sbjct: 381 TRGDLWISWEEGMKVFEEQLLDADWSINAGMWLWLSCSSFFQQFFHTYCPASFGRKADPT 440
Query: 306 GDFI 309
GD+I
Sbjct: 441 GDYI 444
>gi|18858465|ref|NP_571866.1| cryptochrome-1 [Danio rerio]
gi|8698588|dbj|BAA96848.1| cryptochrome 2a [Danio rerio]
Length = 655
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 252/303 (83%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
K + +L + +IIE NGG+ PLTY +FQ+++++MD P ++ ++ TP+ +DH
Sbjct: 127 KTSHTLYNLDKIIELNGGQPPLTYKRFQTLISRMDPPEMPVETLSNSIMGCCVTPVAEDH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+KYGVP+LEELGFDIEGL W GGETEA+ R+ERHLERKAWVA+F RP+M SLLA
Sbjct: 187 GDKYGVPSLEELGFDIEGLPSAVWPGGETEALTRIERHLERKAWVANFERPRMNANSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT NP F
Sbjct: 247 SPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKTSTPPLSLYGQLLWREFFYTAATTNPRF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNPICV+IPWD N EALAKWA A+TGFPWIDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 307 DKMEGNPICVRIPWDKNPEALAKWAEAKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 367 RGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNG 426
Query: 307 DFI 309
DFI
Sbjct: 427 DFI 429
>gi|81864807|sp|Q70AD6.1|CRY1_SPAJD RecName: Full=Cryptochrome-1
gi|44843612|emb|CAE54425.1| sCRY1 protein [Spalax judaei]
Length = 587
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/306 (71%), Positives = 253/306 (82%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLER+AWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERRAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLT DLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTGSDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|387015300|gb|AFJ49769.1| Cryptochrome-1-like [Crotalus adamanteus]
Length = 622
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/306 (71%), Positives = 253/306 (82%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ+++++M+ P E PV T ++ TP+
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISRME---PLEMPVETITAEVMSTCITPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEG+K+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGVKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|47218319|emb|CAG04151.1| unnamed protein product [Tetraodon nigroviridis]
Length = 625
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 216/296 (72%), Positives = 248/296 (83%), Gaps = 7/296 (2%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAP---VTPLLVRQATTPLRDDHDEKYGVP 74
+IIE NGG++PLTY +FQ+++++MD P E P +T ++ + TTPL DDHD+KYGVP
Sbjct: 165 KIIELNGGQSPLTYKRFQTLISRMD---PVEVPAESITAEIMGKCTTPLSDDHDDKYGVP 221
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGFD E L W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP
Sbjct: 222 SLEELGFDTEVLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSP 281
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT NP FD+M NP
Sbjct: 282 YLRFGCLSCRLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAATNNPCFDKMENNP 341
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
ICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+
Sbjct: 342 ICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIG 401
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNGD+I
Sbjct: 402 WEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 457
>gi|399220399|gb|AFP33463.1| cryptochrome 2 [Dicentrarchus labrax]
Length = 668
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 251/303 (82%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
K + +L +IIE NG + PLTY +FQ++++++D P ++ L+ + TP+ +DH
Sbjct: 127 KTSHTLYDLDKIIELNGAQPPLTYKRFQTLISRLDPPEMPVETLSDTLMGRCVTPISEDH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+KYGVP+LEELGFDIEGL W GGETEA+ R+ERHLERKAWVA+F RP+M SLLA
Sbjct: 187 GDKYGVPSLEELGFDIEGLPTAVWPGGETEALTRIERHLERKAWVANFERPRMNANSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT NP F
Sbjct: 247 SPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAATNNPRF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNPICV+IPWD N EALAKWA A+TGFPWIDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 307 DKMEGNPICVRIPWDKNPEALAKWAEAKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 367 RGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNG 426
Query: 307 DFI 309
DFI
Sbjct: 427 DFI 429
>gi|432959668|ref|XP_004086356.1| PREDICTED: cryptochrome-1-like [Oryzias latipes]
Length = 653
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 251/303 (82%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
K++ +L +IIE NGG+ PLTY +FQ++++++D P ++ L+ TP+ +DH
Sbjct: 127 KISHTLYDLDKIIELNGGQPPLTYKRFQTLISRLDPPEMPVETLSDTLMGCCVTPVSEDH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
EKYGVP+LEELGFD EGL W GGETEA+ R+ERHLERKAWVA+F RP+M SLLA
Sbjct: 187 GEKYGVPSLEELGFDTEGLPSAVWPGGETEALTRIERHLERKAWVANFERPRMNANSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT NP F
Sbjct: 247 SPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAATNNPRF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNPICV+IPWD N EALAKWA A+TGFPWIDAIM+QLR+EGWIHHLARHAVACFLT
Sbjct: 307 DKMEGNPICVRIPWDKNPEALAKWAEARTGFPWIDAIMSQLRQEGWIHHLARHAVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 367 RGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNG 426
Query: 307 DFI 309
DFI
Sbjct: 427 DFI 429
>gi|87280964|gb|ABD36589.1| cryptochrome 1 [Podarcis siculus]
Length = 618
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/306 (71%), Positives = 252/306 (82%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ+++++M+ P E PV T ++ + TTP+
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISRME---PLEMPVETITAEVMSKCTTPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEK GVP+LEELGFD GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKCGVPSLEELGFDTGGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLAR AVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARRAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|148540005|ref|NP_571865.4| cryptochrome 1b [Danio rerio]
gi|27882364|gb|AAH44558.1| Cry1b protein [Danio rerio]
Length = 606
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/306 (70%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAP---VTPLLVRQATTPLR 64
+++ +L +IIE NGG++PLTY +FQ+++++MD P E P +T ++ + +TP+
Sbjct: 127 RISHTLYDLDKIIEFNGGQSPLTYKRFQTLISRMD---PVEMPAETITAEIMGKCSTPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHD+K+GVP+LEELGF+ EGL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDDKFGVPSLEELGFETEGLSTAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LY+++KK + P LSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSTPSLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P+FD+M NPICVQIPWD N EALAKWA QTGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PHFDKMEFNPICVQIPWDRNPEALAKWAEGQTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|410994568|gb|AFV96168.1| cryptochrome 2 [Talitrus saltator]
Length = 565
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 216/281 (76%), Positives = 237/281 (84%)
Query: 29 LTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLP 88
LTY FQ+I+A MD P P AP+ ++ A TPL+ DHD+KYGVP LE LGF+ E L P
Sbjct: 196 LTYKTFQNILAMMDPPPPPVAPIEASDLKHAYTPLQHDHDDKYGVPNLEHLGFETEHLPP 255
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
WKGGETEA+ RL+ HLERKAWVASFGRPKMTPQSL A TGLSP+LRFGCLS R FY
Sbjct: 256 AVWKGGETEALSRLKHHLERKAWVASFGRPKMTPQSLFACPTGLSPYLRFGCLSARKFYT 315
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALA 208
+LN LY +IKK P P+SLHG LLWREFFY AAT NP FD M GNPICVQIPWD N EALA
Sbjct: 316 ELNVLYTKIKKVPAPVSLHGHLLWREFFYTAATNNPKFDHMKGNPICVQIPWDKNPEALA 375
Query: 209 KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDA 268
KWA+ QTGFPWIDAIMTQLR EGWIH++ARHAVACFLTRG+LWVSWEEGMK+FDELLLDA
Sbjct: 376 KWAHGQTGFPWIDAIMTQLRTEGWIHNVARHAVACFLTRGNLWVSWEEGMKVFDELLLDA 435
Query: 269 DWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
DWSVNAG WMWLSCSSFFQQFFHCYCPV++GRKADPNGDFI
Sbjct: 436 DWSVNAGSWMWLSCSSFFQQFFHCYCPVRYGRKADPNGDFI 476
>gi|8698586|dbj|BAA96847.1| cryptochrome 1b [Danio rerio]
Length = 606
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/306 (70%), Positives = 254/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAP---VTPLLVRQATTPLR 64
+++ +L +IIE NGG++PLTY +FQ+++++MD P E P +T ++ + +TP+
Sbjct: 127 RISHTLYDLDKIIEFNGGQSPLTYKRFQTLISRMD---PVEMPAETITAEIMGKCSTPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHD K+GVP+LEELGF+ EGL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDNKFGVPSLEELGFETEGLSTAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LY+++KK + P LSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSTPSLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P+FD+M NPICVQIPWD N EALAKWA QTGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PHFDKMEFNPICVQIPWDRNPEALAKWAEGQTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|94733627|emb|CAK05311.1| cryptochrome 1b [Danio rerio]
Length = 606
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/306 (70%), Positives = 254/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAP---VTPLLVRQATTPLR 64
+++ +L +IIE NGG++PLTY +FQ+++++MD P E P +T ++ + +TP+
Sbjct: 127 RISHTLYDLDKIIEFNGGQSPLTYKRFQTLISRMD---PVEMPAETITAEIMGKCSTPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHD K+GVP+LEELGF+ EGL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDNKFGVPSLEELGFETEGLSTAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LY+++KK + P LSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSTPSLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P+FD+M NPICVQIPWD N EALAKWA QTGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PHFDKMEFNPICVQIPWDRNPEALAKWAEGQTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 424 PNGDYI 429
>gi|302745154|gb|ADL62680.1| criptochrome 1b, partial [Phreatichthys andruzzii]
Length = 564
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/306 (70%), Positives = 255/306 (83%), Gaps = 7/306 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAP---VTPLLVRQATTPLR 64
+++ +L +IIE NGG++PLTY +FQ++++KMD P E P +T ++ + TP+
Sbjct: 84 RISHTLYDLDKIIELNGGQSPLTYKRFQTLISKMD---PVEIPAETITAEVMGKCATPVS 140
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHD+K+GVP+LEELGF+ +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 141 DDHDDKFGVPSLEELGFETDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 200
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 201 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSLPPLSLYGQLLWREFFYTAATNN 260
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P+FD+M NPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 261 PHFDKMEFNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 320
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ D
Sbjct: 321 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 380
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 381 PNGDYI 386
>gi|283806654|ref|NP_001164573.1| chryptochrome 2-2 [Acyrthosiphon pisum]
gi|283476385|emb|CAY26040.1| chryptochrome 2-2 [Acyrthosiphon pisum]
Length = 512
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/310 (68%), Positives = 254/310 (81%), Gaps = 1/310 (0%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
M S+ + + +L +II NGGK PLTYH FQ ++ +D P A + + A
Sbjct: 121 MGISVITRCSHTLYQLDKIINVNGGKAPLTYHLFQKLLECIDPPERAVPSIDKEFLGNAF 180
Query: 61 TPLRDDHDEKYGVPTLEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPK 119
TP++ DHDE +GVPTLEELGF +I + W GGETEA+ RL+ HLERKA++ASFG+PK
Sbjct: 181 TPIKYDHDEIFGVPTLEELGFKEINNITRHVWVGGETEALIRLQCHLERKAFIASFGKPK 240
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCA 179
MTPQSL+AS TGL+P+L+FGCLSTRLF+ +LN+LYK+I+K+ PPLSLHGQLLWR+FFYCA
Sbjct: 241 MTPQSLVASPTGLAPYLKFGCLSTRLFFSELNELYKKIRKSQPPLSLHGQLLWRDFFYCA 300
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
+T NPNFDRM+GNPICVQIPWD N AL+KWAN QTG+PWIDAIM QLR+EGWIH +ARH
Sbjct: 301 STNNPNFDRMVGNPICVQIPWDKNPRALSKWANGQTGYPWIDAIMIQLRQEGWIHCIARH 360
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
AVACFLTRGDLW+SWEEGMK+FDELLLDADWSVNAG WMW SCSSF+Q+F HCYCPV+FG
Sbjct: 361 AVACFLTRGDLWLSWEEGMKVFDELLLDADWSVNAGYWMWYSCSSFYQEFIHCYCPVRFG 420
Query: 300 RKADPNGDFI 309
RK DPNGD+I
Sbjct: 421 RKVDPNGDYI 430
>gi|348519202|ref|XP_003447120.1| PREDICTED: cryptochrome-1-like [Oreochromis niloticus]
Length = 570
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 248/303 (81%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
+++ +L + +IIE NG + PLTY +FQ+++ +MD+ +T +++ TP+ +DH
Sbjct: 127 RISHTLYNLDKIIELNGNQPPLTYKRFQAVINRMDAVEMPAETITFEVLKNCVTPISEDH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
DEK+GVP+LEELGF+ EGL W GGETEA+ RLERHLERKAWVA+F RP+M SLLA
Sbjct: 187 DEKFGVPSLEELGFETEGLTTAVWPGGETEALMRLERHLERKAWVANFERPRMNANSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA-PPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS RLFY L LY+++KK PPLSL+GQLLWREFFY AT NP F
Sbjct: 247 SPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNHTPPLSLYGQLLWREFFYTTATNNPCF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARH VACFLT
Sbjct: 307 DKMDGNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHGVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 367 RGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNG 426
Query: 307 DFI 309
D+I
Sbjct: 427 DYI 429
>gi|399220401|gb|AFP33464.1| cryptochrome 1 [Dicentrarchus labrax]
Length = 567
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/303 (68%), Positives = 246/303 (81%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
+++ +L + +IIE N G PLTY +FQ+++ +MD+ +T ++R TP+ +DH
Sbjct: 127 QVSHTLYNLVKIIELNDGHPPLTYKRFQALINRMDAVELPAETITLEVIRNCATPISEDH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
D+K+GVP+LEELGF+ EGL W GGETEA+ RLERHLERKAWVA+F RP+M SLLA
Sbjct: 187 DDKFGVPSLEELGFETEGLTTAIWPGGETEALMRLERHLERKAWVANFERPRMNANSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA-PPPLSLHGQLLWREFFYCAATRNPNF 186
S TGLSP+LRFGCLS RLFY L LY+++KK PPLSL+GQLLWREFFY AT N F
Sbjct: 247 SPTGLSPYLRFGCLSCRLFYFRLTDLYRKVKKNNSPPLSLYGQLLWREFFYTTATNNSCF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNP+CVQIPWD N EALAKWA QTGFPWIDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 307 DKMEGNPVCVQIPWDRNPEALAKWAEGQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK+F+ELL+D DWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 367 RGDLWISWEEGMKVFEELLIDVDWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNG 426
Query: 307 DFI 309
D+I
Sbjct: 427 DYI 429
>gi|283806650|ref|NP_001164572.1| chryptochrome 2-1 [Acyrthosiphon pisum]
gi|283476383|emb|CAY26039.1| chryptochrome 2-1 [Acyrthosiphon pisum]
Length = 512
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/310 (66%), Positives = 253/310 (81%), Gaps = 1/310 (0%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ S+ + + +L +II NGGK PLTYH FQ+I+ +D P A + + A
Sbjct: 121 LGISVITRCSHTLYQLDKIINVNGGKAPLTYHLFQNILECIDPPERAVPSIDKEFLGNAF 180
Query: 61 TPLRDDHDEKYGVPTLEELGFD-IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPK 119
TP + DHD+ +GVPT+EELGF+ I + W GGETEA+ RL+ HLERKA++ASFG+PK
Sbjct: 181 TPTKYDHDKIFGVPTVEELGFEEINNIARHVWVGGETEALIRLQCHLERKAFIASFGKPK 240
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCA 179
MTPQSLLAS TGL+P+L+FGCLSTRL++ +LN+LYK+I+K+ PPLSLHGQLLWR+FFYCA
Sbjct: 241 MTPQSLLASPTGLAPYLKFGCLSTRLYFSELNELYKKIRKSQPPLSLHGQLLWRDFFYCA 300
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
+T NPNFDRM+GNPICVQIPWD N AL+KWAN QTG+PWIDAIM QLR+EGWIH +ARH
Sbjct: 301 STNNPNFDRMVGNPICVQIPWDKNPRALSKWANGQTGYPWIDAIMIQLRQEGWIHCIARH 360
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
AVACFLT GDLW+SWEEGMK+FDELLLDADWSVNAG WMW SCSSF+++F HCYCPV+FG
Sbjct: 361 AVACFLTWGDLWLSWEEGMKVFDELLLDADWSVNAGYWMWYSCSSFYKEFIHCYCPVRFG 420
Query: 300 RKADPNGDFI 309
RK DPNGD+I
Sbjct: 421 RKVDPNGDYI 430
>gi|395543767|ref|XP_003775403.1| PREDICTED: LOW QUALITY PROTEIN: cryptochrome-2 [Sarcophilus
harrisii]
Length = 597
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/294 (70%), Positives = 246/294 (83%), Gaps = 1/294 (0%)
Query: 17 RRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTL 76
RRIIE NG K PLTY +FQ+I+++M+ P + VT + + +R+DHDE YGVP+L
Sbjct: 159 RRIIELNGQKPPLTYKRFQAIISRMELPRKPVSGVTRQQMERCQAEIREDHDEAYGVPSL 218
Query: 77 EELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
EELGF +GL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+L
Sbjct: 219 EELGFPTDGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNATSLLASPTGLSPYL 278
Query: 137 RFGCLSTRLFYHDLNKLYKRIKKA-PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
RFGCLS RLFY+ L +LYK++K+ PPLSL+GQLLWREFFY AAT NP FDRM GNPIC
Sbjct: 279 RFGCLSCRLFYYRLWELYKKVKRNNTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNPIC 338
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 339 IQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWE 398
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 399 SGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 452
>gi|387015302|gb|AFJ49770.1| Cryptochrome-2-like [Crotalus adamanteus]
Length = 590
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 245/293 (83%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++MD P + +T + T ++++HDE YGVP+LE
Sbjct: 151 RIIELNGHKPPLTYKRFQAIISRMDLPKKPVSTITSQQMEMCQTKIQENHDETYGVPSLE 210
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 211 ELGFFTEGLAPAVWQGGETEALTRLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 270
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L +LYK++K+ + PPLSL+GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 271 FGCLSCRLFYYRLWELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNPICI 330
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHA ACFLTRGDLW+SWE
Sbjct: 331 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTRGDLWISWES 390
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 391 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 443
>gi|327259731|ref|XP_003214689.1| PREDICTED: cryptochrome-2-like [Anolis carolinensis]
Length = 586
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 244/293 (83%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++MD P A +T + T ++D+HDE YGVP+LE
Sbjct: 144 RIIELNGHKPPLTYKRFQTIISRMDLPKKPVASITHQQMEMCKTEIQDNHDETYGVPSLE 203
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF E L P W GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 204 ELGFPTESLAPAVWLGGETEALTRLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 263
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L +LYK++K+ + PPLSL+GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 264 FGCLSCRLFYYRLWELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNPICI 323
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SWE
Sbjct: 324 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWES 383
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVN+G WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 384 GVRVFDELLLDADFSVNSGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 436
>gi|432090377|gb|ELK23803.1| Cryptochrome-2 [Myotis davidii]
Length = 539
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/293 (70%), Positives = 243/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P A VT + ++++HDE YGVPTLE
Sbjct: 102 RIIELNGQKPPLTYKRFQAIISRMELPKKPVASVTRHQMESCPAEIQENHDETYGVPTLE 161
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 162 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 221
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 222 FGCLSCRLFYYRLWDLYKKVKRNSSPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 281
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 282 QIPWDHNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 341
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 342 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 394
>gi|149635020|ref|XP_001507425.1| PREDICTED: cryptochrome-2 [Ornithorhynchus anatinus]
Length = 582
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 244/293 (83%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P + VT + ++D+HD+ YGVP+LE
Sbjct: 143 RIIELNGQKPPLTYKRFQAIISRMELPKKPVSCVTSQQMEGCKAEIQDNHDDTYGVPSLE 202
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF +GL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 203 ELGFPTDGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 262
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL+GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 263 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPRFDRMEGNPICI 322
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 323 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 382
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GDFI
Sbjct: 383 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDFI 435
>gi|149725124|ref|XP_001490350.1| PREDICTED: cryptochrome-2-like [Equus caballus]
Length = 579
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 243/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 147 RIIELNGQKPPLTYKRFQAIISRMELPRKPVGSVTSQQMESCRADIQENHDETYGVPSLE 206
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 207 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNAASLLASPTGLSPYLR 266
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LY+++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 267 FGCLSCRLFYYRLWDLYRKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 326
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA A+TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 327 QIPWDRNPEALAKWAEAKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 386
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 387 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 439
>gi|444707572|gb|ELW48837.1| Cryptochrome-2 [Tupaia chinensis]
Length = 577
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 140 RIIELNGQKPPLTYKRFQAIISRMELPRKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 199
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 200 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 259
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 260 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 319
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 320 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 379
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 380 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 432
>gi|332211183|ref|XP_003254698.1| PREDICTED: LOW QUALITY PROTEIN: cryptochrome-2 [Nomascus
leucogenys]
Length = 543
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 243/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 179 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 238
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M+ SLLAS TGLSP+LR
Sbjct: 239 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMSANSLLASPTGLSPYLR 298
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 299 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 358
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 359 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 418
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 419 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 471
>gi|109106624|ref|XP_001113162.1| PREDICTED: cryptochrome-2-like [Macaca mulatta]
gi|402893708|ref|XP_003910033.1| PREDICTED: cryptochrome-2 [Papio anubis]
gi|355566579|gb|EHH22958.1| Cryptochrome-2 [Macaca mulatta]
gi|355752191|gb|EHH56311.1| Cryptochrome-2 [Macaca fascicularis]
Length = 593
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 156 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 215
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 216 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 275
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 276 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 335
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 336 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 395
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 396 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 448
>gi|326920457|ref|XP_003206489.1| PREDICTED: cryptochrome-2 [Meleagris gallopavo]
Length = 540
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/296 (68%), Positives = 250/296 (84%), Gaps = 7/296 (2%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATT---PLRDDHDEKYGVP 74
RIIE NG K PLTY +FQ+I+++M+ P + PV+ ++ +Q T ++++HD+ YGVP
Sbjct: 104 RIIELNGNKPPLTYKRFQAIISRMELP---KKPVSSIVSQQMETCKVDIQENHDDMYGVP 160
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGF +GL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP
Sbjct: 161 SLEELGFPTDGLAPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSP 220
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY+ L +LYK++K+ + PPLSL+GQLLWREFFY AAT NP FDRM GNP
Sbjct: 221 YLRFGCLSCRLFYYRLWELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNP 280
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
IC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 281 ICIQIPWDKNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 340
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 341 WESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 396
>gi|380797951|gb|AFE70851.1| cryptochrome-2 isoform 1, partial [Macaca mulatta]
Length = 579
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 142 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 201
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 202 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 261
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 262 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 321
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 322 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 381
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 382 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 434
>gi|19772572|gb|AAL46564.1| cryptochrome 2 [Gallus gallus]
Length = 531
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/296 (68%), Positives = 250/296 (84%), Gaps = 7/296 (2%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATT---PLRDDHDEKYGVP 74
RIIE NG K PLTY +FQ+I+++M+ P + PV+ ++ +Q T ++++HD+ YGVP
Sbjct: 95 RIIELNGNKPPLTYKRFQAIISRMELP---KKPVSSIVSQQMETCKVDIQENHDDVYGVP 151
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGF +GL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP
Sbjct: 152 SLEELGFPTDGLAPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSP 211
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY+ L +LYK++K+ + PPLSL+GQLLWREFFY AAT NP FDRM GNP
Sbjct: 212 YLRFGCLSCRLFYYRLWELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNP 271
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
IC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 272 ICIQIPWDKNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 331
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 332 WESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 387
>gi|390470436|ref|XP_003734285.1| PREDICTED: cryptochrome-2 isoform 2 [Callithrix jacchus]
Length = 560
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 123 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 182
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 183 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 242
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 243 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 302
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 303 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 362
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 363 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 415
>gi|344280774|ref|XP_003412157.1| PREDICTED: cryptochrome-2 [Loxodonta africana]
Length = 593
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 243/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 156 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 215
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 216 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 275
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L +LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 276 FGCLSCRLFYYRLWELYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 335
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 336 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 395
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 396 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 448
>gi|158255956|dbj|BAF83949.1| unnamed protein product [Homo sapiens]
Length = 593
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 156 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLE 215
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 216 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 275
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYKR+K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 276 FGCLSCRLFYYRLWDLYKRVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 335
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 336 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 395
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 396 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 448
>gi|431915736|gb|ELK16069.1| Cryptochrome-2 [Pteropus alecto]
Length = 593
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 156 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 215
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 216 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 275
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 276 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 335
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 336 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 395
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 396 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 448
>gi|426368087|ref|XP_004051044.1| PREDICTED: cryptochrome-2 isoform 1 [Gorilla gorilla gorilla]
Length = 614
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 177 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 236
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 237 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 296
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 297 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 356
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 357 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 416
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 417 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 469
>gi|344247813|gb|EGW03917.1| Cryptochrome-2 [Cricetulus griseus]
Length = 577
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HD+ YGVP+LE
Sbjct: 140 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGAVTSQQMENCRAEIQENHDDTYGVPSLE 199
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 200 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 259
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 260 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 319
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 320 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 379
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 380 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 432
>gi|332836250|ref|XP_001160595.2| PREDICTED: cryptochrome-2 isoform 1 [Pan troglodytes]
gi|397473567|ref|XP_003808279.1| PREDICTED: cryptochrome-2 isoform 1 [Pan paniscus]
Length = 614
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 177 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 236
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 237 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 296
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 297 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 356
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 357 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 416
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 417 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 469
>gi|426368089|ref|XP_004051045.1| PREDICTED: cryptochrome-2 isoform 2 [Gorilla gorilla gorilla]
Length = 532
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 95 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 154
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 155 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 214
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 215 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 274
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 275 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 334
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 335 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 387
>gi|332836252|ref|XP_003313049.1| PREDICTED: cryptochrome-2 isoform 2 [Pan troglodytes]
gi|397473569|ref|XP_003808280.1| PREDICTED: cryptochrome-2 isoform 2 [Pan paniscus]
Length = 532
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 95 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 154
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 155 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 214
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 215 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 274
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 275 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 334
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 335 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 387
>gi|296217987|ref|XP_002755255.1| PREDICTED: cryptochrome-2 isoform 1 [Callithrix jacchus]
Length = 593
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 156 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 215
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 216 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 275
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 276 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 335
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 336 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 395
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 396 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 448
>gi|395815587|ref|XP_003781307.1| PREDICTED: cryptochrome-2 [Otolemur garnettii]
Length = 612
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 175 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 234
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 235 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 294
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 295 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 354
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 355 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 414
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVN+G WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 415 GVRVFDELLLDADFSVNSGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 467
>gi|351696947|gb|EHA99865.1| Cryptochrome-2 [Heterocephalus glaber]
Length = 593
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/293 (69%), Positives = 243/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P V+ ++ ++++HD+ YGVP+LE
Sbjct: 156 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGAVSSQQMKSCRAEIQENHDDTYGVPSLE 215
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 216 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 275
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 276 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 335
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 336 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 395
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 396 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 448
>gi|45383642|ref|NP_989575.1| cryptochrome-2 [Gallus gallus]
gi|19550965|gb|AAK61386.1| cryptochrome 2 [Gallus gallus]
Length = 582
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/296 (68%), Positives = 250/296 (84%), Gaps = 7/296 (2%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATT---PLRDDHDEKYGVP 74
RIIE NG K PLTY +FQ+I+++M+ P + PV+ ++ +Q T ++++HD+ YGVP
Sbjct: 146 RIIELNGNKPPLTYKRFQAIISRMELP---KKPVSSIVSQQMETCKVDIQENHDDVYGVP 202
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGF +GL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP
Sbjct: 203 SLEELGFPTDGLAPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSP 262
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY+ L +LYK++K+ + PPLSL+GQLLWREFFY AAT NP FDRM GNP
Sbjct: 263 YLRFGCLSCRLFYYRLWELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNP 322
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
IC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 323 ICIQIPWDKNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 382
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 383 WESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 438
>gi|297688842|ref|XP_002821877.1| PREDICTED: cryptochrome-2 [Pongo abelii]
Length = 614
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 177 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 236
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 237 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 296
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 297 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 356
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 357 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 416
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 417 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 469
>gi|403254649|ref|XP_003920073.1| PREDICTED: cryptochrome-2 [Saimiri boliviensis boliviensis]
Length = 593
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 156 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMDSCRAEIQENHDETYGVPSLE 215
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 216 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 275
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 276 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 335
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 336 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 395
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 396 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 448
>gi|410973791|ref|XP_003993331.1| PREDICTED: cryptochrome-2, partial [Felis catus]
Length = 582
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RII+ NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 145 RIIDLNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRAEIQENHDEAYGVPSLE 204
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 205 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 264
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 265 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 324
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 325 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 384
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 385 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 437
>gi|118572252|sp|Q49AN0.2|CRY2_HUMAN RecName: Full=Cryptochrome-2
gi|27469701|gb|AAH41814.1| Cryptochrome 2 (photolyase-like) [Homo sapiens]
gi|119588435|gb|EAW68029.1| cryptochrome 2 (photolyase-like), isoform CRA_a [Homo sapiens]
gi|119588436|gb|EAW68030.1| cryptochrome 2 (photolyase-like), isoform CRA_a [Homo sapiens]
gi|121647012|gb|ABM64210.1| photolyase-like cryptochrome 2 [Homo sapiens]
gi|167996599|gb|ACA14134.1| growth-inhibiting protein 37 [Homo sapiens]
gi|168267486|dbj|BAG09799.1| cryptochrome-2 [synthetic construct]
gi|325463641|gb|ADZ15591.1| cryptochrome 2 (photolyase-like) [synthetic construct]
Length = 593
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 156 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLE 215
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 216 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 275
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 276 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 335
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 336 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 395
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 396 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 448
>gi|188536103|ref|NP_001120929.1| cryptochrome-2 isoform 2 [Homo sapiens]
Length = 532
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 95 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLE 154
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 155 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 214
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 215 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 274
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 275 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 334
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 335 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 387
>gi|118572251|sp|Q8QG60.2|CRY2_CHICK RecName: Full=Cryptochrome-2
Length = 582
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/296 (68%), Positives = 250/296 (84%), Gaps = 7/296 (2%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATT---PLRDDHDEKYGVP 74
RIIE NG K PLTY +FQ+I+++M+ P + PV+ ++ +Q T ++++HD+ YGVP
Sbjct: 146 RIIELNGNKPPLTYKRFQAIISRMELP---KKPVSSIVSQQMETCKVDIQENHDDVYGVP 202
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGF +GL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP
Sbjct: 203 SLEELGFPTDGLAPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSP 262
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY+ L +LYK++K+ + PPLSL+GQLLWREFFY AAT NP FDRM GNP
Sbjct: 263 YLRFGCLSCRLFYYRLWELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNP 322
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
IC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 323 ICIQIPWDKNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 382
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 383 WESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 438
>gi|432862559|ref|XP_004069915.1| PREDICTED: cryptochrome-1-like [Oryzias latipes]
Length = 562
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/303 (67%), Positives = 246/303 (81%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
+++ +L RIIE NGG PLTY +FQ+++ +MD+ +T ++ TP+ ++H
Sbjct: 127 RISHTLYDLDRIIELNGGPPPLTYKRFQALINRMDAVELPAERITLETMQSCVTPVSENH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
D+K+GV +LEELGF+ EGL W GGETEA+ RLERHLERKAWVA++ RP+M SLLA
Sbjct: 187 DDKFGVLSLEELGFETEGLPTAVWPGGETEALLRLERHLERKAWVANYERPRMNANSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNF 186
+ TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AT NP F
Sbjct: 247 TPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTTATNNPCF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNP+CVQIPWD N EALAKWA +TGF WIDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 307 DKMEGNPVCVQIPWDRNPEALAKWAEGRTGFAWIDAIMTQLRQEGWIHHLARHAVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEG+K+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNG
Sbjct: 367 RGDLWISWEEGVKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNG 426
Query: 307 DFI 309
D+I
Sbjct: 427 DYI 429
>gi|3327130|dbj|BAA31633.1| KIAA0658 protein [Homo sapiens]
Length = 589
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 152 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLE 211
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 212 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 271
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 272 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 331
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 332 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 391
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 392 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 444
>gi|302745156|gb|ADL62681.1| criptochrome 2a, partial [Phreatichthys andruzzii]
Length = 488
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/281 (72%), Positives = 235/281 (83%), Gaps = 1/281 (0%)
Query: 30 TYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPP 89
TY FQ+++++MD P ++ ++ TP+ +DH +KYGVP+LEELGFDIEGL
Sbjct: 1 TYKPFQTLISRMDPPEMPAETLSNTIMGCCVTPVSEDHGDKYGVPSLEELGFDIEGLPSA 60
Query: 90 TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHD 149
W GGETEA+ R+ERHLERKAWVA+F RP+M SLLAS TGLSP+LRFGCLS RLFY
Sbjct: 61 VWPGGETEALTRIERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFK 120
Query: 150 LNKLYKRIKKA-PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALA 208
L LY+++KK PPLSL+GQLLWREFFY AAT NP FD+M GNPICV+IPWD N EALA
Sbjct: 121 LTDLYRKVKKTNTPPLSLYGQLLWREFFYTAATSNPRFDKMEGNPICVRIPWDKNPEALA 180
Query: 209 KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDA 268
KWA A+TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SWEEGMK+F+ELLLDA
Sbjct: 181 KWAEAKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDA 240
Query: 269 DWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
DWSVNAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNGDFI
Sbjct: 241 DWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDFI 281
>gi|188536100|ref|NP_066940.2| cryptochrome-2 isoform 1 [Homo sapiens]
gi|194380960|dbj|BAG64048.1| unnamed protein product [Homo sapiens]
Length = 614
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 177 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLE 236
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 237 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 296
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 297 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 356
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 357 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 416
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 417 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 469
>gi|194378884|dbj|BAG57993.1| unnamed protein product [Homo sapiens]
Length = 461
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/293 (70%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 24 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLE 83
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 84 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 143
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 144 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 203
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 204 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 263
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 264 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 316
>gi|73983386|ref|XP_540761.2| PREDICTED: cryptochrome-2 [Canis lupus familiaris]
Length = 593
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG K PLTY +FQ+I+++M+ P VT + ++D+HD+ YGVP+LE
Sbjct: 156 KIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRADIQDNHDDTYGVPSLE 215
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 216 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 275
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 276 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 335
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 336 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 395
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 396 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 448
>gi|50510573|dbj|BAD32272.1| mKIAA0658 protein [Mus musculus]
Length = 584
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/293 (69%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+++++M+ P V+ + ++++HD+ YGVP+LE
Sbjct: 147 RIIELNGQKPPLTYKRFQALISRMELPKKPAVAVSSQQMESCRAEIQENHDDTYGVPSLE 206
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 207 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 266
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 267 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 326
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 327 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 386
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 387 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 439
>gi|224051116|ref|XP_002198900.1| PREDICTED: cryptochrome-2, partial [Taeniopygia guttata]
Length = 540
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/296 (68%), Positives = 250/296 (84%), Gaps = 7/296 (2%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATT---PLRDDHDEKYGVP 74
RIIE NG K PLTY +FQ+I+++M+ P + PV+ ++ +Q T ++++HD+ YGVP
Sbjct: 104 RIIELNGHKPPLTYKRFQAIISRMELP---KKPVSTVISQQMETCKVDIQENHDDVYGVP 160
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGF +GL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP
Sbjct: 161 SLEELGFPTDGLAPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSP 220
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY+ L +LYK++K+ + PPLSL+GQLLWREFFY AAT NP FDRM GNP
Sbjct: 221 YLRFGCLSCRLFYYRLWELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNP 280
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
IC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 281 ICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 340
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 341 WESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 396
>gi|311247933|ref|XP_003122883.1| PREDICTED: cryptochrome-2 isoform 1 [Sus scrofa]
Length = 594
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/293 (69%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG K PLTY +FQ+++++M+ P VT + ++++HDE YGVP+LE
Sbjct: 157 KIIELNGQKPPLTYKRFQALISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 216
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 217 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 276
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 277 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 336
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 337 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 396
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 397 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 449
>gi|335281976|ref|XP_003353935.1| PREDICTED: cryptochrome-2 isoform 2 [Sus scrofa]
Length = 461
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/293 (69%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG K PLTY +FQ+++++M+ P VT + ++++HDE YGVP+LE
Sbjct: 24 KIIELNGQKPPLTYKRFQALISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 83
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 84 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 143
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 144 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 203
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 204 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 263
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 264 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 316
>gi|27312016|ref|NP_034093.1| cryptochrome-2 [Mus musculus]
gi|164519087|ref|NP_001106804.1| cryptochrome-2 [Mus musculus]
gi|81882058|sp|Q9R194.1|CRY2_MOUSE RecName: Full=Cryptochrome-2
gi|5670009|gb|AAD46561.1|AF156987_1 cryptochrome 2 [Mus musculus]
gi|26334673|dbj|BAC31037.1| unnamed protein product [Mus musculus]
gi|45219826|gb|AAH66799.1| Cryptochrome 2 (photolyase-like) [Mus musculus]
gi|56078856|gb|AAH54794.1| Cryptochrome 2 (photolyase-like) [Mus musculus]
gi|74227568|dbj|BAE21836.1| unnamed protein product [Mus musculus]
gi|148695658|gb|EDL27605.1| cryptochrome 2 (photolyase-like), isoform CRA_a [Mus musculus]
gi|148695659|gb|EDL27606.1| cryptochrome 2 (photolyase-like), isoform CRA_a [Mus musculus]
Length = 592
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/293 (69%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+++++M+ P V+ + ++++HD+ YGVP+LE
Sbjct: 155 RIIELNGQKPPLTYKRFQALISRMELPKKPAVAVSSQQMESCRAEIQENHDDTYGVPSLE 214
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 215 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 274
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 275 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 334
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 335 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 394
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 395 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 447
>gi|348558770|ref|XP_003465189.1| PREDICTED: cryptochrome-2 [Cavia porcellus]
Length = 593
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/293 (69%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P V+ + ++++HD+ YGVP+LE
Sbjct: 156 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGAVSSQQMESCRAEIQENHDDTYGVPSLE 215
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 216 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 275
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 276 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 335
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 336 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 395
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 396 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 448
>gi|355681095|gb|AER96735.1| cryptochrome 2 [Mustela putorius furo]
Length = 521
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/293 (69%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG K PLTY +FQ+I+++M+ P VT + ++++HD+ YGVP+LE
Sbjct: 84 KIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRADIQENHDDTYGVPSLE 143
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 144 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 203
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 204 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 263
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 264 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 323
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 324 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 376
>gi|359073433|ref|XP_002693610.2| PREDICTED: cryptochrome-2 [Bos taurus]
Length = 591
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 241/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG K PLTY +FQ+I+++M+ P VT + +++ HDE YGVP+LE
Sbjct: 154 KIIELNGQKPPLTYKRFQAIISRMELPRKPVGSVTSQQMEGCRAEIQESHDETYGVPSLE 213
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 214 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 273
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 274 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 333
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 334 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 393
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 394 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 446
>gi|440895552|gb|ELR47705.1| Cryptochrome-2, partial [Bos grunniens mutus]
Length = 564
Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 241/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG K PLTY +FQ+I+++M+ P VT + +++ HDE YGVP+LE
Sbjct: 127 KIIELNGQKPPLTYKRFQAIISRMELPRKPVGSVTSQQMEGCRAEIQESHDETYGVPSLE 186
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 187 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 246
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 247 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 306
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 307 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 366
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 367 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 419
>gi|71297422|gb|AAH35161.1| CRY2 protein [Homo sapiens]
Length = 461
Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 241/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 24 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLE 83
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 84 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 143
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 144 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 203
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 204 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 263
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSC +FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 264 GVRVFDELLLDADFSVNAGSWMWLSCGAFFQQFFHCYCPVGFGRRTDPSGDYI 316
>gi|194673414|ref|XP_585942.4| PREDICTED: cryptochrome-2 [Bos taurus]
gi|296479702|tpg|DAA21817.1| TPA: cryptochrome 2-like [Bos taurus]
Length = 585
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 241/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG K PLTY +FQ+I+++M+ P VT + +++ HDE YGVP+LE
Sbjct: 148 KIIELNGQKPPLTYKRFQAIISRMELPRKPVGSVTSQQMEGCRAEIQESHDETYGVPSLE 207
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 208 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 267
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 268 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 327
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 328 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 387
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 388 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 440
>gi|119618202|gb|EAW97796.1| cryptochrome 1 (photolyase-like), isoform CRA_b [Homo sapiens]
Length = 427
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/268 (76%), Positives = 228/268 (85%), Gaps = 4/268 (1%)
Query: 46 PAEAPV---TPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRL 102
P E PV T ++ + TTPL DDHDEKYGVP+LEELGFD +GL W GGETEA+ RL
Sbjct: 3 PLEIPVETITSEVIEKCTTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRL 62
Query: 103 ERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-AP 161
ERHLERKAWVA+F RP+M SLLAS TGLSP+LRFGCLS RLFY L LYK++KK +
Sbjct: 63 ERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSS 122
Query: 162 PPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWID 221
PPLSL+GQLLWREFFY AAT NP FD+M GNPICVQIPWD N EALAKWA +TGFPWID
Sbjct: 123 PPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWID 182
Query: 222 AIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS 281
AIMTQLR+EGWIHHLARHAVACFLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLS
Sbjct: 183 AIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLS 242
Query: 282 CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
CSSFFQQFFHCYCPV FGR+ DPNGD+I
Sbjct: 243 CSSFFQQFFHCYCPVGFGRRTDPNGDYI 270
>gi|44843616|emb|CAE54427.1| sCRY2L protein [Spalax judaei]
Length = 606
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/293 (69%), Positives = 241/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RII+ NG K PLTY +FQ+I+++M+ P VT + ++D+HD+ YGVP+LE
Sbjct: 169 RIIDLNGQKPPLTYKRFQAIISRMELPKKPVVAVTSQQMESCRAEIQDNHDDTYGVPSLE 228
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 229 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 288
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 289 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 348
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACF TRGDLWVSWE
Sbjct: 349 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFPTRGDLWVSWES 408
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 409 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 461
>gi|44843614|emb|CAE54426.1| sCRY2S protein [Spalax judaei]
Length = 591
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/293 (69%), Positives = 241/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RII+ NG K PLTY +FQ+I+++M+ P VT + ++D+HD+ YGVP+LE
Sbjct: 154 RIIDLNGQKPPLTYKRFQAIISRMELPKKPVVAVTSQQMESCRAEIQDNHDDTYGVPSLE 213
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 214 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 273
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 274 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 333
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACF TRGDLWVSWE
Sbjct: 334 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFPTRGDLWVSWES 393
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 394 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 446
>gi|281348773|gb|EFB24357.1| hypothetical protein PANDA_011308 [Ailuropoda melanoleuca]
Length = 580
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/293 (69%), Positives = 241/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG K PLTY +FQ+I+++M+ P VT + +++ HD+ YGVP+LE
Sbjct: 144 KIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRADIQESHDDTYGVPSLE 203
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 204 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 263
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 264 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 323
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 324 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 383
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 384 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 436
>gi|301773864|ref|XP_002922356.1| PREDICTED: cryptochrome-2-like, partial [Ailuropoda melanoleuca]
Length = 581
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/293 (69%), Positives = 241/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG K PLTY +FQ+I+++M+ P VT + +++ HD+ YGVP+LE
Sbjct: 144 KIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRADIQESHDDTYGVPSLE 203
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 204 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 263
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 264 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 323
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 324 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 383
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 384 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 436
>gi|149022681|gb|EDL79575.1| cryptochrome 2 (photolyase-like), isoform CRA_a [Rattus norvegicus]
gi|149022682|gb|EDL79576.1| cryptochrome 2 (photolyase-like), isoform CRA_a [Rattus norvegicus]
gi|183985822|gb|AAI66416.1| Cryptochrome 2 (photolyase-like) [Rattus norvegicus]
Length = 594
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/293 (68%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+++++M+ P V+ + ++++HD+ YGVP+LE
Sbjct: 155 RIIELNGQKPPLTYKRFQALISRMELPKKPVGAVSSQHMENCRAEIQENHDDTYGVPSLE 214
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 215 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 274
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LY+++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 275 FGCLSCRLFYYRLWDLYRKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 334
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 335 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 394
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 395 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 447
>gi|193211374|ref|NP_001123208.1| cryptochrome-2 [Ovis aries]
gi|156763811|gb|ABS44876.1| cryptochrome 2 [Ovis aries]
Length = 596
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/293 (69%), Positives = 240/293 (81%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG K PLTY +FQ+I+++M+ P VT + +++ HDE YGVP+LE
Sbjct: 159 KIIELNGQKPPLTYKRFQAIISRMELPRKPVGSVTSQQMEGCQAEIQESHDETYGVPSLE 218
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVAS+ RP+M SLLAS TGLSP+LR
Sbjct: 219 ELGFPTEGLGPAVWRGGETEALARLDKHLERKAWVASYERPRMNASSLLASPTGLSPYLR 278
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LY+++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 279 FGCLSCRLFYYRLWDLYRKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 338
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIM QLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 339 QIPWDRNPEALAKWAEGKTGFPWIDAIMAQLRQEGWIHHLARHAVACFLTRGDLWVSWES 398
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 399 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 451
>gi|2073148|dbj|BAA19864.1| photolyase/blue-light receptor homolog2 [Mus musculus]
Length = 569
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/293 (68%), Positives = 241/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+++++M+ P V+ + ++ +HD+ YGVP+LE
Sbjct: 132 RIIELNGQKPPLTYKRFQALISRMELPKKPAVAVSSSRMESCRAEIQKNHDDTYGVPSLE 191
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 192 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 251
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDR+ GNPIC+
Sbjct: 252 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRVEGNPICI 311
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 312 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 371
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 372 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 424
>gi|19173768|ref|NP_596896.1| cryptochrome-2 [Rattus norvegicus]
gi|81867613|sp|Q923I8.1|CRY2_RAT RecName: Full=Cryptochrome-2
gi|15072464|gb|AAK61419.1| cryptochrome 2 [Rattus norvegicus]
Length = 594
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/293 (68%), Positives = 242/293 (82%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+++++M+ P V+ + ++++HD+ YGVP+LE
Sbjct: 155 RIIELNGQKPPLTYKRFQALISRMELPKKPVGAVSSQHMENCRAEIQENHDDTYGVPSLE 214
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 215 ELGFPTEGLGPAVWQGGETEALVRLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 274
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LY+++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 275 FGCLSCRLFYYRLWDLYRKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 334
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 335 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 394
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 395 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 447
>gi|344253241|gb|EGW09345.1| Cryptochrome-1 [Cricetulus griseus]
Length = 428
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/265 (76%), Positives = 227/265 (85%), Gaps = 2/265 (0%)
Query: 46 PAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERH 105
PAE +T ++ + TPL DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERH
Sbjct: 7 PAET-ITSDVIGKCMTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERH 65
Query: 106 LERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPL 164
LERKAWVA+F RP+M SLLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPL
Sbjct: 66 LERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPL 125
Query: 165 SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIM 224
SL+GQLLWREFFY AAT NP FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIM
Sbjct: 126 SLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIM 185
Query: 225 TQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSS 284
TQLR+EGWIHHLARHAVACFLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSS
Sbjct: 186 TQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSS 245
Query: 285 FFQQFFHCYCPVKFGRKADPNGDFI 309
FFQQFFHCYCPV FGR+ DPNGD+I
Sbjct: 246 FFQQFFHCYCPVGFGRRTDPNGDYI 270
>gi|147901075|ref|NP_001083936.1| cryptochrome 2 (photolyase-like) [Xenopus laevis]
gi|50415857|gb|AAH77381.1| Cry2 protein [Xenopus laevis]
Length = 570
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/299 (67%), Positives = 242/299 (80%), Gaps = 1/299 (0%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKY 71
+L S R+IE NG PLTY +FQ+I+++M+ P VT + ++ +HDE Y
Sbjct: 135 TLYDSDRVIELNGHSPPLTYKRFQAIISRMELPRRLAPSVTRQQMEACRAEIKRNHDETY 194
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
GVP+LEELGF E P W GGETEA+ RL+RHLERKAWVA++ RP+M+ SLLAS TG
Sbjct: 195 GVPSLEELGFHSENKGPAIWPGGETEALARLDRHLERKAWVANYERPRMSANSLLASPTG 254
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRML 190
LSP+LRFGCLS RLFY+ L +LY+++KK +PPPLSL+GQLLWREFFY AAT NP FD+M
Sbjct: 255 LSPYLRFGCLSCRLFYYRLQELYQKVKKNSPPPLSLYGQLLWREFFYTAATNNPKFDQME 314
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
GNPICVQIPWD N +ALAKW +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDL
Sbjct: 315 GNPICVQIPWDKNPKALAKWTEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDL 374
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W SWE G+K+FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 375 WNSWECGVKVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 433
>gi|291290513|dbj|BAI82612.1| cryptochrome 2 [Xenopus (Silurana) tropicalis]
Length = 557
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/293 (69%), Positives = 239/293 (81%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG PLTY +FQ+I+++M+ P VT + ++ +HDE YGVP+L+
Sbjct: 135 RIIELNGHSPPLTYKRFQAIISRMELPRRPAPSVTRQQMEACRAEIKRNHDETYGVPSLD 194
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF E P W GGETEA+ RL+RHLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 195 ELGFHSEIKGPSIWPGGETEALARLDRHLERKAWVANYERPRMNANSLLASPTGLSPYLR 254
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L +LYK++KK +PPPLSL+GQLLWREFFY AAT NP FD+M GNPICV
Sbjct: 255 FGCLSCRLFYYRLKELYKKVKKNSPPPLSLYGQLLWREFFYTAATNNPKFDQMEGNPICV 314
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N +ALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW SWE
Sbjct: 315 QIPWDKNPKALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWNSWEC 374
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+K+FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 375 GVKVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 427
>gi|15341192|gb|AAK94666.1| cryptochrome 2a [Xenopus laevis]
Length = 501
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/293 (69%), Positives = 236/293 (80%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG PLTY +FQ+I+++M+ P VT + ++ +HDE YGVP+LE
Sbjct: 74 RIIELNGHSPPLTYKRFQAIISRMEIPRRPAPSVTRQQMEACRAEIKRNHDETYGVPSLE 133
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF E W GGETEA+ RL+RHLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 134 ELGFHRENKGSAIWPGGETEALARLDRHLERKAWVANYERPRMNANSLLASPTGLSPYLR 193
Query: 138 FGCLSTRLFYHDLNKLYKRIKKA-PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS +LFY+ L +LY+++KK PPPLSL GQLLWREFFY AAT NP FD+M GNPICV
Sbjct: 194 FGCLSCKLFYYRLQELYRKVKKNNPPPLSLFGQLLWREFFYTAATNNPKFDQMEGNPICV 253
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N +ALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW SWE
Sbjct: 254 QIPWDKNPKALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWNSWEC 313
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+K+FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DPNGDFI
Sbjct: 314 GVKVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPNGDFI 366
>gi|147903319|ref|NP_001082139.1| cryptochrome 2a [Xenopus laevis]
gi|46249526|gb|AAH68732.1| LOC398246 protein [Xenopus laevis]
Length = 568
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/293 (69%), Positives = 236/293 (80%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG PLTY +FQ+I+++M+ P VT + ++ +HDE YGVP+LE
Sbjct: 141 RIIELNGHSPPLTYKRFQAIISRMEIPRRPAPSVTRQQMEACRAEIKRNHDETYGVPSLE 200
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF E W GGETEA+ RL+RHLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 201 ELGFHRENKGSAIWPGGETEALARLDRHLERKAWVANYERPRMNANSLLASPTGLSPYLR 260
Query: 138 FGCLSTRLFYHDLNKLYKRIKKA-PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS +LFY+ L +LY+++KK PPPLSL GQLLWREFFY AAT NP FD+M GNPICV
Sbjct: 261 FGCLSCKLFYYRLQELYRKVKKNNPPPLSLFGQLLWREFFYTAATNNPKFDQMEGNPICV 320
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N +ALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW SWE
Sbjct: 321 QIPWDKNPKALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWNSWEC 380
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+K+FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DPNGDFI
Sbjct: 381 GVKVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPNGDFI 433
>gi|15341194|gb|AAK94667.1| cryptochrome 2b [Xenopus laevis]
Length = 570
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/293 (68%), Positives = 238/293 (81%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
R+IE NG PLTY +FQ+I+++M+ P VT + ++ +HDE YGVP+LE
Sbjct: 141 RVIELNGHSPPLTYKRFQAIISRMELPRRPAPSVTRQQMEACRAEIKRNHDETYGVPSLE 200
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF E W GGETEA+ RL+RHLERKAWVA++ RP+M+ SLLAS TGLSP+LR
Sbjct: 201 ELGFHSENKGHAIWPGGETEALARLDRHLERKAWVANYERPRMSANSLLASPTGLSPYLR 260
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L +LY+++KK +PPPLSL+GQLLWREFFY AAT NP FD+M GNPICV
Sbjct: 261 FGCLSCRLFYYRLQELYQKVKKNSPPPLSLYGQLLWREFFYTAATNNPKFDQMEGNPICV 320
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N +ALAKW +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW SWE
Sbjct: 321 QIPWDKNPKALAKWTEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWNSWEC 380
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+K+FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 381 GVKVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 433
>gi|40254688|ref|NP_571861.2| cryptochrome-2 [Danio rerio]
gi|28278010|gb|AAH46088.1| Cryptochrome 3 [Danio rerio]
Length = 598
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/301 (66%), Positives = 240/301 (79%), Gaps = 1/301 (0%)
Query: 10 TLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDE 69
T +L + RIIE N PLT+ +FQ+IV +++ P +T + + T + D+HDE
Sbjct: 129 THTLYNPDRIIEMNNHSPPLTFKRFQAIVNRLELPRKPLPTITQEQMARCRTQISDNHDE 188
Query: 70 KYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ 129
YGVP+LEELGF +G WKGGETEA+ RL +HL+RKAWVA+F RP+++ QSL S
Sbjct: 189 HYGVPSLEELGFRTQGDSLHVWKGGETEALERLNKHLDRKAWVANFERPRISGQSLFPSP 248
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDR 188
TGLSP+LRFGCLS R+FY++L L+ ++++ + PPLSL GQLLWREFFY A T NPNFD
Sbjct: 249 TGLSPYLRFGCLSCRVFYYNLRDLFMKLRRRSSPPLSLFGQLLWREFFYTAGTNNPNFDH 308
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRG
Sbjct: 309 MEGNPICVQIPWDHNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRG 368
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
DLW+SWE GMK+F+ELLLDADWSVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+
Sbjct: 369 DLWISWESGMKVFEELLLDADWSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDY 428
Query: 309 I 309
I
Sbjct: 429 I 429
>gi|170059953|ref|XP_001865587.1| cryptochrome-1 [Culex quinquefasciatus]
gi|167878532|gb|EDS41915.1| cryptochrome-1 [Culex quinquefasciatus]
Length = 789
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/292 (69%), Positives = 222/292 (76%), Gaps = 44/292 (15%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIEKN G+ PLTY+QFQ+I+A MD+P E +T + +A TP DDHD+KYGVPTLE
Sbjct: 184 RIIEKNNGRAPLTYNQFQAIIASMDAPPQPEPAITLAAIGRAVTPQCDDHDDKYGVPTLE 243
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF+ EGL PP W GGETEA+ RLERHLERKAW
Sbjct: 244 ELGFETEGLKPPIWVGGETEALARLERHLERKAW-------------------------- 277
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
+IKKA PPLSLHGQL WREFFYCAAT+NPNFD+M GNPICVQ
Sbjct: 278 ------------------KIKKAYPPLSLHGQLFWREFFYCAATKNPNFDKMAGNPICVQ 319
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
IPWD N EALAKWA+ QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW+SWEEG
Sbjct: 320 IPWDRNAEALAKWASGQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWISWEEG 379
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
MK+F+ELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD+I
Sbjct: 380 MKVFEELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDYI 431
>gi|8698592|dbj|BAA96850.1| cryptochrome3 [Danio rerio]
Length = 598
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/299 (66%), Positives = 239/299 (79%), Gaps = 1/299 (0%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKY 71
+L + RIIE N PLT+ +FQ+IV +++ P +T + + T + D+HDE Y
Sbjct: 131 TLYNPDRIIEMNNHSPPLTFKRFQAIVNRLELPRKPLPTITQEQMARCRTQISDNHDEHY 190
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
GVP+LEELGF +G WKGGETEA+ RL +HL+RKAWVA+F RP+++ QSL S TG
Sbjct: 191 GVPSLEELGFRTQGDSLHVWKGGETEALERLNKHLDRKAWVANFERPRISGQSLFPSPTG 250
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRML 190
LSP+LRFGCLS R+FY++L L+ ++++ + PPLSL GQLLWREFFY A T NPNFD M
Sbjct: 251 LSPYLRFGCLSCRVFYYNLRDLFMKLRRRSSPPLSLFGQLLWREFFYTAGTNNPNFDHME 310
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDL
Sbjct: 311 GNPICVQIPWDHNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDL 370
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W+SWE GMK+F+ELLLDADWSVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 371 WISWESGMKVFEELLLDADWSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 429
>gi|302745160|gb|ADL62683.1| cryptochrome 3, partial [Phreatichthys andruzzii]
Length = 475
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/302 (66%), Positives = 241/302 (79%), Gaps = 2/302 (0%)
Query: 10 TLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDE 69
T +L + RIIE N PLT+ +FQ+IV +++ P +T + + T + D+HDE
Sbjct: 107 THTLYNPDRIIEMNNHSPPLTFKRFQAIVNRLELPRKPLPTITQEQMARCRTQISDNHDE 166
Query: 70 KYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM-TPQSLLAS 128
YGVP+LEELGF + WKGGETEAM RL +HL+RK WVA+F RP++ T QSL AS
Sbjct: 167 HYGVPSLEELGFKTQRDSSHVWKGGETEAMERLNKHLDRKGWVANFERPRIITAQSLFAS 226
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFD 187
TGLSP+LRFGCLS R+FY++L +L+ ++++ + PPLSL GQLLWREFFY A T NPNFD
Sbjct: 227 PTGLSPYLRFGCLSCRVFYYNLRELFMKLRRRSSPPLSLFGQLLWREFFYTAGTNNPNFD 286
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
RM GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTR
Sbjct: 287 RMEGNPICVQIPWDHNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTR 346
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
GDLW+SWE GMK+F+ELLLDADWSVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD
Sbjct: 347 GDLWISWESGMKVFEELLLDADWSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGD 406
Query: 308 FI 309
+I
Sbjct: 407 YI 408
>gi|30088882|gb|AAP13561.1| cryptochrome 2 [Rana catesbeiana]
Length = 543
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/293 (67%), Positives = 235/293 (80%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG PLTY +FQ+IV++M+ P +T + + ++ HD+ YGVP+LE
Sbjct: 142 KIIELNGNSPPLTYKRFQAIVSRMELPRRPVPSITRQQMEKCRAEIKSTHDDTYGVPSLE 201
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF + W GGETEA+ RL+RHLERKAWVA + RP+M SLLAS TGLSP+LR
Sbjct: 202 ELGFPRDNPGAAVWPGGETEALARLDRHLERKAWVAHYERPRMNANSLLASPTGLSPYLR 261
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L +LY+++KK +PPPLSL GQLLWREFFY AAT NP FD+M GNPICV
Sbjct: 262 FGCLSCRLFYYRLRELYQKVKKNSPPPLSLFGQLLWREFFYTAATNNPKFDQMEGNPICV 321
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKW +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW SWE
Sbjct: 322 QIPWDKNPEALAKWTEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWNSWEC 381
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G+K+FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 382 GVKVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 434
>gi|380254429|dbj|BAL72539.1| cryptochrome3 [Siganus guttatus]
Length = 507
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/293 (66%), Positives = 235/293 (80%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE N PLT+ +FQ+IV +++ P AP+T + + T + D+HD+ Y +P+LE
Sbjct: 137 RIIEMNSNNPPLTFKRFQTIVRRLELPRRPLAPITQQQMDKCRTKIADNHDQLYSIPSLE 196
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL W+GGE+EA+ RL +HL++K WVA+ P++ SL AS TGLSP+LR
Sbjct: 197 ELGFRTEGLPAAVWRGGESEALDRLNKHLDKKVWVANLEHPRVNTCSLYASPTGLSPYLR 256
Query: 138 FGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS R+ Y++L +LY ++ K + PPLSL GQLLWREFFY AAT NPNFDRM GNPICV
Sbjct: 257 FGCLSCRVLYYNLRELYMKLCKHSSPPLSLFGQLLWREFFYTAATNNPNFDRMEGNPICV 316
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHH+ARHAVACFLTRGDLW+SWE
Sbjct: 317 QIPWDQNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHVARHAVACFLTRGDLWISWES 376
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
GMK+F+ELLLDADWSVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 377 GMKVFEELLLDADWSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 429
>gi|348523572|ref|XP_003449297.1| PREDICTED: cryptochrome-2-like [Oreochromis niloticus]
Length = 672
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 193/293 (65%), Positives = 233/293 (79%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE N PLT+ +FQ+IV++++ P P+T + + T + D+HD+ Y +P+LE
Sbjct: 137 RIIEMNNNSPPLTFKRFQTIVSRLELPRRPLPPITQQQMDKCHTKIGDNHDQLYSIPSLE 196
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF GL P W+GGE++A+ RL +HL++K WV S P++ SL AS TGLSP+LR
Sbjct: 197 ELGFRTAGLPPAVWRGGESQALDRLSKHLDKKVWVTSLEHPRVNTCSLYASPTGLSPYLR 256
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS R+ Y++L +LY +++K PPLSL GQLLWREFFY AAT NPNFDRM GNPICV
Sbjct: 257 FGCLSCRVLYYNLRELYMKVRKRCSPPLSLFGQLLWREFFYTAATNNPNFDRMDGNPICV 316
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SWE
Sbjct: 317 QIPWDQNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWES 376
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
GMK+F+ELLLDADWSVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP GD+I
Sbjct: 377 GMKVFEELLLDADWSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPTGDYI 429
>gi|384080881|dbj|BAM11103.1| cryptochrome 2 (photolyase-like), partial [Siebenrockiella
crassicollis]
Length = 358
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 190/277 (68%), Positives = 235/277 (84%), Gaps = 1/277 (0%)
Query: 33 QFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWK 92
+FQ+I+++M+ P + +T + + + ++++HD+ YGVP+LEELGF +GL P WK
Sbjct: 1 RFQAIISRMELPKKPVSSITSQQMEKCKSEIQENHDDMYGVPSLEELGFPTDGLAPAVWK 60
Query: 93 GGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNK 152
GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LRFGCLS RLFY+ L +
Sbjct: 61 GGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLWE 120
Query: 153 LYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWAN 212
LYK++K+ PP LSL+GQLLWREFFY AAT NP FDRM GNPIC+QIPWD N EALAKWA
Sbjct: 121 LYKKVKRTPP-LSLYGQLLWREFFYTAATNNPKFDRMEGNPICIQIPWDRNPEALAKWAE 179
Query: 213 AQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSV 272
+TGFPWIDAIMTQL++EGWIHHLARHAVACFLTRGDLW+SWE G+++FDELLLDAD+SV
Sbjct: 180 GKTGFPWIDAIMTQLKQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADFSV 239
Query: 273 NAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
NAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 240 NAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 276
>gi|66910245|gb|AAH96780.1| Cry2b protein [Danio rerio]
gi|197247271|gb|AAI64795.1| Cry2b protein [Danio rerio]
Length = 639
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/306 (65%), Positives = 241/306 (78%), Gaps = 4/306 (1%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
K++ +L RIIE NGG++PLTY +FQ++V+ M+ P P + ++ + TP+ ++H
Sbjct: 127 KISHTLYDLDRIIELNGGQSPLTYKRFQTLVSSMEPPDPPLSSPDRGMMGKCVTPISENH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHL---ERKAWVASFGRPKMTPQS 124
+KYGVP LEELGFD EGL P W GGE+EA++R+ERHL AW +F RPKM
Sbjct: 187 RDKYGVPLLEELGFDTEGLAPAVWPGGESEALKRMERHLGPDSTVAWQENFERPKMNASP 246
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
L+AS GLSP+LRFGCLS RLFY L +LYK++KK P +SL+ ++LWREFFY AAT N
Sbjct: 247 LMASPLGLSPYLRFGCLSCRLFYCKLTQLYKKVKKNMNPSISLYDKILWREFFYTAATNN 306
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FDRM GNPIC++IPWD N EALAKWA A+TGFPWIDAIM QLR+EGWIHHLARHAVAC
Sbjct: 307 PRFDRMEGNPICIRIPWDRNAEALAKWAEAKTGFPWIDAIMMQLRQEGWIHHLARHAVAC 366
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG W+ SCSSFFQQFFHCYCPV FGR+ D
Sbjct: 367 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWLCHSCSSFFQQFFHCYCPVGFGRRID 426
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 427 PNGDFI 432
>gi|18858467|ref|NP_571867.1| cryptochrome 2b [Danio rerio]
gi|8698590|dbj|BAA96849.1| cryptochrome 2b [Danio rerio]
Length = 638
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/305 (64%), Positives = 239/305 (78%), Gaps = 3/305 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
K++ +L RIIE NGG++PLTY +FQ++V+ M+ P P A ++ + TP+ ++H
Sbjct: 127 KISHTLYDLDRIIELNGGQSPLTYKRFQTLVSSMEPPDPPLASPDRGMMGKCVTPISENH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPKMTPQSL 125
+KYGVP LEELGFD EGL P W GGE+EA++R+ERHL + AW +F RPKM L
Sbjct: 187 RDKYGVPLLEELGFDTEGLAPAVWPGGESEALKRMERHLGPDSTAWQENFERPKMNASPL 246
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA-PPPLSLHGQLLWREFFYCAATRNP 184
+AS GLSP+LRFGCLS RLFY + K++KK P +SL+ ++LWREFFY AAT NP
Sbjct: 247 MASPLGLSPYLRFGCLSCRLFYCNSLSSTKKVKKNMNPSISLYDKILWREFFYTAATNNP 306
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
FDRM GNPIC++IPWD N EALAKWA A+TGFPWIDAIM QLR+EGWIHHLARHAVACF
Sbjct: 307 RFDRMEGNPICIRIPWDRNAEALAKWAEAKTGFPWIDAIMMQLRQEGWIHHLARHAVACF 366
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADP 304
LTRGDLW+SWEEGMK+F+ELLLDADWSVNAG W+ SCSSFFQQFFHCYCPV FGR+ DP
Sbjct: 367 LTRGDLWISWEEGMKVFEELLLDADWSVNAGSWLCHSCSSFFQQFFHCYCPVGFGRRIDP 426
Query: 305 NGDFI 309
NGDFI
Sbjct: 427 NGDFI 431
>gi|241701053|ref|XP_002411902.1| DNA photolyase, putative [Ixodes scapularis]
gi|215504842|gb|EEC14336.1| DNA photolyase, putative [Ixodes scapularis]
Length = 253
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/230 (84%), Positives = 208/230 (90%)
Query: 80 GFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFG 139
GFD + L W GGETEA+ RLERHLERKAWVASFG PKMTP+SLLASQTGLSP+LRFG
Sbjct: 15 GFDTDNLKDAVWPGGETEALARLERHLERKAWVASFGSPKMTPKSLLASQTGLSPYLRFG 74
Query: 140 CLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
CLS RLFYH L LY++IKK+ PPLSL GQLLWREFFYCAATRNPNFDRM NPICVQIP
Sbjct: 75 CLSARLFYHQLADLYRKIKKSNPPLSLQGQLLWREFFYCAATRNPNFDRMHNNPICVQIP 134
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
WDVN EALAKWAN QTG+PWIDAIM QLREEGWIHH+AR+AVACFLTRGDLW+SWEEGMK
Sbjct: 135 WDVNAEALAKWANGQTGYPWIDAIMRQLREEGWIHHVARYAVACFLTRGDLWLSWEEGMK 194
Query: 260 IFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+FDELLLDADWSVNAG WMWLSCSSFFQQFFH YCPV+FGRKADP+GDFI
Sbjct: 195 VFDELLLDADWSVNAGSWMWLSCSSFFQQFFHLYCPVRFGRKADPSGDFI 244
>gi|390355184|ref|XP_785873.3| PREDICTED: cryptochrome-1-like [Strongylocentrotus purpuratus]
Length = 754
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/307 (64%), Positives = 238/307 (77%), Gaps = 3/307 (0%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSP-SPAEAPVTPLLVRQATTPL 63
+ K++ +L + I+ N + PLTY +FQ I++ M P PAEA + V T +
Sbjct: 139 VISKVSHTLYDPQEILALNNNEPPLTYKRFQDIISLMGIPIYPAEA-LEAEDVEGLDTFI 197
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
+H++KYG+PTLEELGFD E + PP W GGETEA +RL+RHLERKAWVA+F RP+M+P
Sbjct: 198 DPNHEDKYGIPTLEELGFDPEDVPPPMWIGGETEAKQRLDRHLERKAWVANFERPRMSPA 257
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAP-PPLSLHGQLLWREFFYCAATR 182
SL+AS GLSP+LRFGCLS R FY L +LY++++K PLSLHGQLLWREFF+ A
Sbjct: 258 SLMASPAGLSPYLRFGCLSPRTFYWKLTELYQKVRKTTNTPLSLHGQLLWREFFFTVACN 317
Query: 183 NPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
N FD M+ NPIC+QIPWD N L KWAN +TG+PWIDAIMTQLR EGWIH LARHAVA
Sbjct: 318 NRQFDHMVDNPICIQIPWDKNTALLNKWANGETGYPWIDAIMTQLRLEGWIHPLARHAVA 377
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKA 302
CFLTRGDLW+SWEEGMK+FDE LLDADWSVNAG W+WLSCSSF+QQFFHCYCPVKFGR+
Sbjct: 378 CFLTRGDLWISWEEGMKVFDEYLLDADWSVNAGNWIWLSCSSFYQQFFHCYCPVKFGRRT 437
Query: 303 DPNGDFI 309
DPNGD++
Sbjct: 438 DPNGDYV 444
>gi|432863953|ref|XP_004070204.1| PREDICTED: cryptochrome-2-like [Oryzias latipes]
Length = 667
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/293 (64%), Positives = 229/293 (78%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE N PLT+ +FQ+IV++++ P +T + + D+HD+ Y +P+LE
Sbjct: 137 RIIELNNNSPPLTFKRFQTIVSRLELPRRPLPAITQQQMDSCQRQIGDNHDQLYSIPSLE 196
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF E L P W+GGE+EA+ RL +HL++K WVAS ++ SL AS TGLSP+LR
Sbjct: 197 ELGFRTERLPPAVWRGGESEALDRLSKHLDKKVWVASVEHTRVNKCSLYASPTGLSPYLR 256
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS R+ Y++L +LY +++K PPLSL GQLLWREFFY AAT NPNFDRM GNPICV
Sbjct: 257 FGCLSCRVLYYNLRELYMKLRKRCSPPLSLFGQLLWREFFYTAATNNPNFDRMEGNPICV 316
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SW
Sbjct: 317 QIPWDQNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWVS 376
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
GMK+F+ELLLDA WSVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 377 GMKVFEELLLDAGWSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 429
>gi|145881069|gb|ABP97098.1| cryptochrome CRY1 [Acropora millepora]
Length = 552
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 185/291 (63%), Positives = 228/291 (78%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEE 78
II+ N G PLTY +F +IV + +P A + L+ +TP+ +DH+EK+GVP+L+E
Sbjct: 162 IIKHNSGTAPLTYKKFLAIVRSLGNPQHPCATLDVHLLGGCSTPVSEDHEEKFGVPSLKE 221
Query: 79 LGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
LG D+ L W GGETEA+ RL+RHLERKAW+ASF +PK+TP SL S TGLSP+LRF
Sbjct: 222 LGLDVAKLSTEIWHGGETEALIRLDRHLERKAWIASFEKPKVTPNSLFPSPTGLSPYLRF 281
Query: 139 GCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQI 198
GCLS RLFYH L++LY+++K PP+SL+GQLLWREFF+ A NPNFD+M NP+C+QI
Sbjct: 282 GCLSPRLFYHRLSELYRKVKCKDPPISLYGQLLWREFFFTVAANNPNFDQMDENPVCLQI 341
Query: 199 PWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGM 258
PW N E L KW QTGFPWIDAIM QL++EG IHHLARHAV CFLTRGDLW+SWEEGM
Sbjct: 342 PWTANPEWLKKWEQGQTGFPWIDAIMIQLKQEGXIHHLARHAVGCFLTRGDLWISWEEGM 401
Query: 259 KIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
K+F+ LLDA+WS+NAG WMWLSCS+FFQQFF+C CPV FGRK DPNGD++
Sbjct: 402 KVFERWLLDAEWSLNAGNWMWLSCSAFFQQFFNCICPVGFGRKLDPNGDYV 452
>gi|223647560|gb|ACN10538.1| Cryptochrome-1 [Salmo salar]
Length = 643
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/312 (63%), Positives = 235/312 (75%), Gaps = 10/312 (3%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLL---VRQATT 61
+ +++ +L +IIE NGG PLT+ FQ++V DS P +APV L + + T
Sbjct: 124 VVSRISHTLYDLDKIIELNGGHPPLTFKHFQTLV---DSMPPPDAPVEALSRASMGRCVT 180
Query: 62 PLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLE---RKAWVASFGRP 118
P+ D+H +KYGVP LEELGFD EGL P W GGE+EA+ R+ER L AW +F
Sbjct: 181 PVSDNHRDKYGVPLLEELGFDTEGLAPAVWPGGESEALTRIERQLGPDLSTAWQVNFEST 240
Query: 119 KMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK-KAPPPLSLHGQLLWREFFY 177
+ T LL S GLSP+LRFGCLS RLFY L +LYK++K PP+SL+ +LLWREFFY
Sbjct: 241 RKTASPLLPSPLGLSPYLRFGCLSCRLFYSKLAELYKKVKTNGSPPISLYDKLLWREFFY 300
Query: 178 CAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLA 237
AAT NP FD+M GNPIC++IPWD N EALAKWA A+TGFPWIDAIMTQLR+EGWIHHLA
Sbjct: 301 TAATNNPRFDKMDGNPICIRIPWDRNAEALAKWAEAKTGFPWIDAIMTQLRQEGWIHHLA 360
Query: 238 RHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVK 297
RHAVACFLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG W+ SCSSFFQQFFHCYCPV
Sbjct: 361 RHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWLCHSCSSFFQQFFHCYCPVG 420
Query: 298 FGRKADPNGDFI 309
FGRK DP GDFI
Sbjct: 421 FGRKIDPKGDFI 432
>gi|410926431|ref|XP_003976682.1| PREDICTED: cryptochrome-2-like [Takifugu rubripes]
Length = 718
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/293 (63%), Positives = 226/293 (77%), Gaps = 1/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE N PLT+ +FQ+IV++++ P VT + + + D ++ Y +P+LE
Sbjct: 137 RIIEVNNNSPPLTFKRFQTIVSRLELPRRPLPTVTQHQIHKCGAKMADSQEQLYSIPSLE 196
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGE+EA+ RL +HL++K WVA+ +++ SL AS GLSP+LR
Sbjct: 197 ELGFRTEGLPPAVWRGGESEALERLHKHLDKKVWVANLEHSRVSTCSLYASPAGLSPYLR 256
Query: 138 FGCLSTRLFYHDLNKLYKRIKKA-PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS R+ Y++L +LY +++K PP SL GQLLWREFFY AAT NPNFDRM GNPICV
Sbjct: 257 FGCLSCRVLYYNLRELYVKLRKGCSPPPSLFGQLLWREFFYTAATNNPNFDRMEGNPICV 316
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA TGFPWIDAIMTQLR+EGWIHH AR AVACFLTRGDLW+SWE
Sbjct: 317 QIPWDQNPEALAKWAEGHTGFPWIDAIMTQLRQEGWIHHQARRAVACFLTRGDLWISWEC 376
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
GMK+F+ELLLDADWSVNAG WMWLSCS+FFQQFF CYCPV FGR+ DP+GD+I
Sbjct: 377 GMKVFEELLLDADWSVNAGSWMWLSCSAFFQQFFKCYCPVGFGRRTDPSGDYI 429
>gi|301609141|ref|XP_002934138.1| PREDICTED: cryptochrome-2 [Xenopus (Silurana) tropicalis]
Length = 531
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/295 (67%), Positives = 230/295 (77%), Gaps = 18/295 (6%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRDDHDEKYGVPTL 76
RIIE NG PLTY +FQ+I+++M+ P PA P + RQ G +L
Sbjct: 115 RIIELNGHSPPLTYKRFQAIISRMELPRRPA-----PSVTRQQME----------GCNSL 159
Query: 77 -EELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPF 135
GF E P W GGETEA+ RL+RHLERKAWVA++ RP+M SLLAS TGLSP+
Sbjct: 160 CIASGFHSEIKGPSIWPGGETEALARLDRHLERKAWVANYERPRMNANSLLASPTGLSPY 219
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
LRFGCLS RLFY+ L +LYK++KK +PPPLSL+GQLLWREFFY AAT NP FD+M GNPI
Sbjct: 220 LRFGCLSCRLFYYRLKELYKKVKKNSPPPLSLYGQLLWREFFYTAATNNPKFDQMEGNPI 279
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
CVQIPWD N +ALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW SW
Sbjct: 280 CVQIPWDKNPKALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWNSW 339
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
E G+K+FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 340 ECGVKVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 394
>gi|395538375|ref|XP_003771158.1| PREDICTED: cryptochrome-1 [Sarcophilus harrisii]
Length = 671
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/259 (73%), Positives = 215/259 (83%), Gaps = 4/259 (1%)
Query: 54 LLVRQATTPLRDDHDEKYGVPTL--EELGFDIEGLLPPTWKGGETEAMRRLERHLERKAW 111
++VR + T L D + G+ L +E GFD +GL W GGETEA+ RLERHLERKAW
Sbjct: 230 VIVRISHT-LYDLDKPEAGLQKLVWDEEGFDTDGLPSAVWPGGETEALTRLERHLERKAW 288
Query: 112 VASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQL 170
VA+F RP+M SLLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQL
Sbjct: 289 VANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQL 348
Query: 171 LWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREE 230
LWREFFY AAT NP FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+E
Sbjct: 349 LWREFFYTAATNNPRFDKMEGNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQE 408
Query: 231 GWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFF 290
GWIHHLARHAVACFLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFF
Sbjct: 409 GWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFF 468
Query: 291 HCYCPVKFGRKADPNGDFI 309
HCYCPV FGR+ DPNGD+I
Sbjct: 469 HCYCPVGFGRRTDPNGDYI 487
>gi|432094365|gb|ELK25942.1| Cryptochrome-1 [Myotis davidii]
Length = 535
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/306 (64%), Positives = 228/306 (74%), Gaps = 35/306 (11%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 QISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
F+TRGDLW+SWEEGMK QFFHCYCPV FGR+ D
Sbjct: 364 FVTRGDLWISWEEGMK----------------------------QFFHCYCPVGFGRRTD 395
Query: 304 PNGDFI 309
PNGD+I
Sbjct: 396 PNGDYI 401
>gi|298162590|gb|ADI59662.1| cryptochrome [Amphiprion melanopus]
Length = 308
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/269 (67%), Positives = 219/269 (81%), Gaps = 1/269 (0%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+ +++ +L +IIE NGG++PLTY +FQ+++++MD+ +T ++ + TTPL
Sbjct: 40 VTVRISHTLYDLDKIIELNGGQSPLTYKRFQTLISRMDAVEVPAESITAEIMGKCTTPLS 99
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
+DHD+K+GVP+LEELGFD EGL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 100 EDHDDKFGVPSLEELGFDTEGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 159
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+ RFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 160 LLASPTGLSPYPRFGCLSCRLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAATNN 219
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M NPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 220 PCFDKMESNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 279
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSV 272
FLTRGDLW+SWEEGMK+F+ELLLDADWSV
Sbjct: 280 FLTRGDLWISWEEGMKVFEELLLDADWSV 308
>gi|431905253|gb|ELK10298.1| Cryptochrome-1 [Pteropus alecto]
Length = 513
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/305 (61%), Positives = 219/305 (71%), Gaps = 47/305 (15%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNP 184
LLAS TGLSP+LRFGCLS RLFY L LYK+I
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKI--------------------------- 276
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
PWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACF
Sbjct: 277 --------------PWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACF 322
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADP 304
LTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ DP
Sbjct: 323 LTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDP 382
Query: 305 NGDFI 309
NGD+I
Sbjct: 383 NGDYI 387
>gi|343959648|dbj|BAK63681.1| cryptochrome 2 [Pan troglodytes]
Length = 380
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 177/231 (76%), Positives = 201/231 (87%), Gaps = 1/231 (0%)
Query: 80 GFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFG 139
GF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LRFG
Sbjct: 5 GFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFG 64
Query: 140 CLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQI 198
CLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+QI
Sbjct: 65 CLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQI 124
Query: 199 PWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGM 258
PWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE G+
Sbjct: 125 PWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGV 184
Query: 259 KIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 185 RVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 235
>gi|440907719|gb|ELR57829.1| Cryptochrome-1 [Bos grunniens mutus]
Length = 589
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/309 (62%), Positives = 230/309 (74%), Gaps = 11/309 (3%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVSWEEGMK---IFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
FLTRGDLW+SWEEGMK + ++ S+ ++ L C+ F H Y V R
Sbjct: 364 FLTRGDLWISWEEGMKQSLFYKFKNINHFASLQHHSFLVLLCNVMHTTFCHLYLIVPIMR 423
Query: 301 KADPNGDFI 309
DPNGD+I
Sbjct: 424 -TDPNGDYI 431
>gi|380254427|dbj|BAL72538.1| cryptochrome1 [Siganus guttatus]
Length = 581
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/303 (59%), Positives = 228/303 (75%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
+++ +L S +IIE N G PLTY +FQ I+++MD+ VT + + TTP+ +H
Sbjct: 127 RISHTLYSLAKIIELNDGHPPLTYKRFQDIISQMDAVEHPAETVTQRDLDKCTTPISKNH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+K+GVP+LEELGF+ EGL W GGETEA+ RLE+HLE + V + G + +SLLA
Sbjct: 187 SDKFGVPSLEELGFETEGLSAAVWPGGETEALMRLEQHLEWRESVLNHGCSHIDARSLLA 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAP-PPLSLHGQLLWREFFYCAATRNPNF 186
+ T L P+LRFGCLS RLFY L +L+K+IK+ PP + QLLW EF Y +T NP F
Sbjct: 247 NPTVLCPYLRFGCLSCRLFYFRLTELHKKIKQNNIPPPYFYDQLLWSEFLYTVSTNNPCF 306
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNP+C+QIPWD N EALAKWA +TGFPWIDAIMTQL++EGWIH LA+++VACFLT
Sbjct: 307 DKMEGNPVCIQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLKQEGWIHSLAKYSVACFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEGMK F+ELL+DADWS+NAG WMW SCSSFF+QFFHC CPV+ GR+ DP G
Sbjct: 367 RGDLWISWEEGMKAFEELLIDADWSMNAGSWMWFSCSSFFRQFFHCRCPVESGRRKDPQG 426
Query: 307 DFI 309
D+I
Sbjct: 427 DYI 429
>gi|28279917|gb|AAH44204.1| Cry5 protein, partial [Danio rerio]
Length = 545
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/306 (57%), Positives = 225/306 (73%), Gaps = 2/306 (0%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPL 63
+ K++ +L + RII++N GKTP+TY + QS+V M P P AP + R +TPL
Sbjct: 150 VTPKISHTLYNIDRIIDENNGKTPMTYIRLQSVVKAMGHPKKPIPAPTNEDM-RGVSTPL 208
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
DDH+EK+G+PTLE+LG D L P + GGE EA+RRL+ H+ER WV F +PK +P
Sbjct: 209 SDDHEEKFGIPTLEDLGLDTSSLGPHLFPGGEQEALRRLDEHMERTNWVCKFEKPKTSPN 268
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SL+ S T LSP++RFGCLS R+F+ L +Y+ + PP+SLHGQLLWREFFY A
Sbjct: 269 SLIPSTTVLSPYVRFGCLSARIFWWRLADVYRGKTHSDPPVSLHGQLLWREFFYTTAVGI 328
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNF++M GN CVQ+ WD N E LA W A+TGFP+IDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 329 PNFNKMEGNSACVQVDWDNNPEHLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVAC 388
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEG K+F+ELLLD+DWS+NAG W WLS S+FF Q+F Y P+ FG+K D
Sbjct: 389 FLTRGDLWISWEEGQKVFEELLLDSDWSLNAGNWQWLSASTFFHQYFRVYSPIAFGKKTD 448
Query: 304 PNGDFI 309
+GD+I
Sbjct: 449 KHGDYI 454
>gi|156353900|ref|XP_001623146.1| predicted protein [Nematostella vectensis]
gi|156209813|gb|EDO31046.1| predicted protein [Nematostella vectensis]
Length = 541
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/294 (59%), Positives = 219/294 (74%), Gaps = 3/294 (1%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEE 78
II++NGG PLTY +F S++ + P P + P TPL D+HDE YGVPT+EE
Sbjct: 156 IIDRNGGTPPLTYKKFLSVIEGIAPPDPPVPHIDPSAQELGHTPLSDNHDELYGVPTMEE 215
Query: 79 LGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
LG + L W GGETEA++RL+RHLERKAW+ASFG+PK+T SL+AS +G+SP+LRF
Sbjct: 216 LGLETSKLFVEVWHGGETEALKRLDRHLERKAWIASFGKPKVTSDSLMASPSGVSPYLRF 275
Query: 139 GCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQI 198
GCLS RLFY+ L LY+++K PPP SL+GQLLWREFF+ +T NPNFD+M NPIC+ I
Sbjct: 276 GCLSPRLFYYRLMDLYRKVKGGPPPTSLYGQLLWREFFFVVSTNNPNFDKMESNPICLYI 335
Query: 199 PWDVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
W + + L KW +AQTGFPWIDAIM+QL++EGWIH+LAR A+A FLTRG LW+SWE
Sbjct: 336 KWRTDKQVASDLQKWTDAQTGFPWIDAIMSQLKQEGWIHYLARVAIASFLTRGCLWISWE 395
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
GMK+F E LLDADWS NAG WMW S S+F QQFF+ CPV+F + D +GD+I
Sbjct: 396 AGMKVFAEHLLDADWSSNAGNWMWWSYSAFSQQFFNPPCPVEFSKSLDASGDYI 449
>gi|18858473|ref|NP_571863.1| cryptochrome 5 [Danio rerio]
gi|8698596|dbj|BAA96852.1| 6-4 photolyase [Danio rerio]
Length = 519
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/306 (57%), Positives = 223/306 (72%), Gaps = 2/306 (0%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPL 63
+ K++ +L + RII++N GKTP+TY + QS+V M P P AP + R +TPL
Sbjct: 124 VTPKISHTLYNIDRIIDENNGKTPMTYIRLQSVVKAMGHPKKPIPAPTNEDM-RGVSTPL 182
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
DDH+EK+G+PTLE+LG D L P + GGE EA+RRL+ H+ER WV F +PK +P
Sbjct: 183 SDDHEEKFGIPTLEDLGLDTSSLGPHLFPGGEQEALRRLDEHMERTNWVCKFEKPKTSPN 242
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SL+ S T LSP++RFGCLS R F+ L +Y+ + PP+SLHGQLLWREFFY A
Sbjct: 243 SLIPSTTVLSPYVRFGCLSARTFWWRLADVYRGKTHSDPPVSLHGQLLWREFFYTTAVGI 302
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNF++M GN CVQ+ WD N E LA W A+TGFP+ID IMTQLR+EGWIHHLARHAVAC
Sbjct: 303 PNFNKMEGNSACVQVDWDNNPEHLAAWREARTGFPFIDTIMTQLRQEGWIHHLARHAVAC 362
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEG K+F+ELLLD+DWS+NAG W WLS S+FF Q+F Y P+ FG+K D
Sbjct: 363 FLTRGDLWISWEEGQKVFEELLLDSDWSLNAGNWQWLSASTFFHQYFRVYSPIAFGKKTD 422
Query: 304 PNGDFI 309
+GD+I
Sbjct: 423 KHGDYI 428
>gi|341616316|gb|AEK86195.1| CRY1A, partial [Halichoeres trimaculatus]
Length = 309
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/288 (64%), Positives = 225/288 (78%), Gaps = 1/288 (0%)
Query: 23 NGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFD 82
N G+ P+TY +FQ+++++MD P VT ++ TP+ DHD+K+GVPTLEELGF+
Sbjct: 2 NDGQPPVTYKRFQALISQMDPVEPPAETVTLDIINSCATPISPDHDDKFGVPTLEELGFE 61
Query: 83 IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLS 142
EGL P W GGETEA++RLE+HLE+KAW A RP+M P SLLAS T LS +LRFGCLS
Sbjct: 62 TEGLSPAVWPGGETEALKRLEQHLEKKAWGAHCERPRMNPNSLLASPTELSAYLRFGCLS 121
Query: 143 TRLFYHDLNKLYKRIKKAPP-PLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWD 201
RL Y L LY ++K+ P S +GQLL REFF+ AT NP FD+M GNP+CVQIPW+
Sbjct: 122 CRLLYFKLTDLYHKVKQNNAVPYSPYGQLLCREFFFTTATNNPCFDKMEGNPVCVQIPWE 181
Query: 202 VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLAR AVACFLTRGDLW+SWEEG+K+F
Sbjct: 182 RNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARRAVACFLTRGDLWISWEEGVKVF 241
Query: 262 DELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ELL+DADWS NAG WMWLSCS+FFQQFF C CPV FGR+ DP GD+I
Sbjct: 242 EELLIDADWSGNAGSWMWLSCSAFFQQFFQCCCPVGFGRRTDPKGDYI 289
>gi|410912170|ref|XP_003969563.1| PREDICTED: uncharacterized protein LOC101062553 [Takifugu rubripes]
Length = 1321
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/303 (56%), Positives = 220/303 (72%), Gaps = 2/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRDD 66
K++ +L RIIE+N GKTPLTY Q+IV K+ P P AP L + TP +
Sbjct: 126 KVSHTLFDINRIIEENNGKTPLTYKSMQAIVKKLGPPKRPLSAPSMEDL-KDVNTPCSES 184
Query: 67 HDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
H++KY +PTLE+ G ++ L + GGE EA+RRLE H++R AWV +F +PK +P SL
Sbjct: 185 HEKKYRIPTLEDFGHNLADLPEEQFPGGEQEALRRLEEHMKRTAWVCNFEKPKTSPNSLS 244
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
S T LSP++ FGCLS R F+ L+ +Y+ K + PP+SLHGQLLWREFFY A+ NF
Sbjct: 245 PSTTVLSPYVTFGCLSVRTFWWRLSDVYEGKKHSAPPVSLHGQLLWREFFYTASVGISNF 304
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
++M+ NP+C Q+ WD+N E LA W A+TGFP+IDA+MTQLR++GWIHHLARHAVACFLT
Sbjct: 305 NKMVDNPVCTQVDWDINSEYLAAWREARTGFPFIDAVMTQLRQQGWIHHLARHAVACFLT 364
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEG K+F+ELLLD DW++NAG W WLS S+FF QFF Y PV FG+K D NG
Sbjct: 365 RGDLWISWEEGQKVFEELLLDGDWALNAGNWQWLSASAFFHQFFRVYSPVAFGKKTDKNG 424
Query: 307 DFI 309
D+I
Sbjct: 425 DYI 427
>gi|47217864|emb|CAG02357.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2050
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/303 (56%), Positives = 222/303 (73%), Gaps = 2/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRDD 66
+++ +L + R++E+N GK PLTY+ Q+IV K+ P P AP L + +TP +D
Sbjct: 126 RVSHTLYDTERVLEENNGKPPLTYNSMQAIVKKLGPPKRPISAPSMDDL-KGVSTPCLED 184
Query: 67 HDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
H++KYG+PTLE+LG D GL + GGE EA+RRLE +++ +WV +F +P+ +P SL
Sbjct: 185 HEKKYGIPTLEDLGHDPAGLPEEKFPGGEQEALRRLEDQMKKTSWVCNFEKPQTSPNSLS 244
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
S T LSP++ FGCLS R F+ L+ +Y K + PP+SLHGQLLWREFFY A+ PNF
Sbjct: 245 PSTTVLSPYVTFGCLSARTFWWRLSDVYSGKKHSAPPVSLHGQLLWREFFYTASVGIPNF 304
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
++M NP+C Q+ WD + E LA W A+TGFP+IDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 305 NKMADNPVCTQVDWDTDSEYLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLT 364
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEG K+F+ELLLD DW++NAG W WLS S+FF QFF Y PV FG+K D NG
Sbjct: 365 RGDLWISWEEGQKVFEELLLDGDWALNAGNWQWLSASAFFHQFFRVYSPVAFGKKTDKNG 424
Query: 307 DFI 309
D+I
Sbjct: 425 DYI 427
>gi|156752080|gb|ABU93792.1| cryptochrome 3 [Carassius auratus]
Length = 237
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/221 (76%), Positives = 195/221 (88%), Gaps = 1/221 (0%)
Query: 90 TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHD 149
WKGGETEA+ RL +HL+RKAWVA+F RP++T QSL AS TGLSP+LRFGCLS R+FY++
Sbjct: 9 VWKGGETEALERLNKHLDRKAWVANFERPRITAQSLFASPTGLSPYLRFGCLSCRVFYYN 68
Query: 150 LNKLYKRIKKAP-PPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALA 208
L +LY +++++ PPLSL GQLLWREFFY A T NPNFD M GNPICVQIPWD N EALA
Sbjct: 69 LWELYMKLRRSSSPPLSLFGQLLWREFFYTAGTNNPNFDHMEGNPICVQIPWDHNPEALA 128
Query: 209 KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDA 268
KWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SWE GMK+F+ELLLDA
Sbjct: 129 KWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGMKVFEELLLDA 188
Query: 269 DWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
DWSVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 189 DWSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 229
>gi|405975335|gb|EKC39908.1| Cryptochrome-1 [Crassostrea gigas]
Length = 510
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 220/302 (72%), Gaps = 7/302 (2%)
Query: 9 LTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSP-SPAEAPVTPLLVRQATTPLRDDH 67
++ +L +RII KNGGK PLTY + Q++++ + SP P ++P + T DH
Sbjct: 128 VSHTLFDPQRIISKNGGKAPLTYQRLQTVLSSLGSPPKPVDSP------SECKTKTESDH 181
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
D+KYGVP+LE+LG + P + GGETEA+RRLE + +K WV +F +PK P SL
Sbjct: 182 DKKYGVPSLEDLGKSEKECGPLLFPGGETEALRRLESMMGKKNWVCTFEKPKTAPNSLEP 241
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFD 187
S T LSP+L+FGCLS R+FY+ L ++Y + K PP+SL GQLLWREF+YC A PNFD
Sbjct: 242 STTVLSPYLKFGCLSPRMFYYKLQEVYNKAKHTSPPVSLLGQLLWREFYYCVAVDTPNFD 301
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
+M GNP+C QIPWD N L W +TG+P+IDA+MTQLR+EGWIHHLARH+VACFLTR
Sbjct: 302 KMEGNPVCKQIPWDTNESYLKAWKEGRTGYPFIDAVMTQLRQEGWIHHLARHSVACFLTR 361
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
GDLW++WEEGMK+F+E LLDADWS+NAG WMWLS S+FF Q+F Y P++FG+K D +GD
Sbjct: 362 GDLWINWEEGMKVFEEYLLDADWSLNAGNWMWLSASAFFHQYFRVYSPIEFGKKTDKDGD 421
Query: 308 FI 309
I
Sbjct: 422 NI 423
>gi|156393374|ref|XP_001636303.1| predicted protein [Nematostella vectensis]
gi|156223405|gb|EDO44240.1| predicted protein [Nematostella vectensis]
Length = 533
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/311 (54%), Positives = 226/311 (72%), Gaps = 2/311 (0%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ IE++++ +L RI+ KNGG PLTY +FQSIV+ + P+ + +V
Sbjct: 124 LGVDIEQRVSHTLYDLDRIVNKNGGTAPLTYKKFQSIVSSLGPPAAPLPAIDKKMVAGCN 183
Query: 61 TPLRDDHDEKYGVPTLEELGFDI-EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPK 119
TP +HD+ YGVPTLEE+G ++ E + GGETEA+ RLE +++++ WV F +P
Sbjct: 184 TPTTANHDKIYGVPTLEEIGQEVPEESREVLYPGGETEALERLEVYMKKEDWVCKFEKPN 243
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYC 178
P S+ S T LSP++ +GCLS RLFY L ++Y + KK + PP+SLHGQLLWREFF
Sbjct: 244 TAPNSIEPSTTVLSPYMTYGCLSARLFYTRLAEIYAKKKKHSQPPVSLHGQLLWREFFTT 303
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
AA + PNF++M+GN +C+Q+PWD N E LA WA A+TG+P+IDAIMTQLR EGW+HHLAR
Sbjct: 304 AAYKTPNFNKMVGNSLCLQVPWDQNDEYLAAWAEARTGYPYIDAIMTQLRREGWVHHLAR 363
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
H+VACFLTRGDLW+SWEEG+K+F+ LL+D DW++NAG WMWLS SSFF +F Y PV F
Sbjct: 364 HSVACFLTRGDLWISWEEGLKVFERLLIDHDWNLNAGNWMWLSASSFFHAYFRVYSPVAF 423
Query: 299 GRKADPNGDFI 309
G+K DPNGD+I
Sbjct: 424 GKKTDPNGDYI 434
>gi|260800305|ref|XP_002595074.1| hypothetical protein BRAFLDRAFT_60127 [Branchiostoma floridae]
gi|229280316|gb|EEN51085.1| hypothetical protein BRAFLDRAFT_60127 [Branchiostoma floridae]
Length = 507
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 216/310 (69%), Gaps = 3/310 (0%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
M + + +L R +E+NGG PLTY +F + +M P + T T
Sbjct: 126 MGVEVVTHVAHTLYDIDRTVERNGGTPPLTYRKFLKVYNEMGKPPKEKETATTEHFANCT 185
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
P D+K+ + TLEELG + P + GGETEA+RRLE+ LE K WV F +PK
Sbjct: 186 LPPEALQDKKFDMVTLEELGMRCD--FPAKFVGGETEALRRLEKSLEDKDWVLKFEKPKT 243
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCA 179
+P SLL S T LSP++ GCLS RLFYH L+K+Y + K + PP+SLHGQL+WREFFY A
Sbjct: 244 SPNSLLPSTTVLSPYITVGCLSARLFYHQLDKIYSKAKNHSQPPVSLHGQLIWREFFYTA 303
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
A PNF++M GN +C+QIPW+ N E L +W NAQTGFPWIDA MTQLR+EGWIHHLARH
Sbjct: 304 AAHTPNFNQMEGNRVCLQIPWNKNDEHLTRWRNAQTGFPWIDAAMTQLRKEGWIHHLARH 363
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
AVACFLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLS S+FF Q+F Y P+ FG
Sbjct: 364 AVACFLTRGDLWISWEEGMKVFEELLLDADWSLNAGNWMWLSASAFFHQYFRVYSPIVFG 423
Query: 300 RKADPNGDFI 309
+K DP G FI
Sbjct: 424 KKTDPKGTFI 433
>gi|223647614|gb|ACN10565.1| Cryptochrome-1 [Salmo salar]
Length = 523
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/303 (57%), Positives = 219/303 (72%), Gaps = 2/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRDD 66
K++ +L + RIIE+N GK PLTY++ Q++V+ + P P AP + + TP +
Sbjct: 127 KVSHTLYNIDRIIEENNGKAPLTYNRLQTLVSSIGPPKRPIPAPTCDDM-KDVKTPCSEK 185
Query: 67 HDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
H+E YG+ TLE+L D E L + GGE EA+RRL++H+ RK WV F +P+ +P SL
Sbjct: 186 HEENYGISTLEKLYQDPESLTEELFPGGEQEALRRLDQHMARKEWVCGFEKPQTSPNSLS 245
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
S T LSP++ FGCLS R F+ L +Y+ K + PP+SLHGQLLWREFFY A PNF
Sbjct: 246 PSTTVLSPYMTFGCLSARTFWWSLTDVYQGKKHSQPPVSLHGQLLWREFFYTAGLGIPNF 305
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M GNP+C Q+ WD N E LA WA A+TGFP+IDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 306 DKMEGNPVCTQVDWDSNFEYLAAWAEARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLT 365
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEG K+F+ELLLD DWS+NAG W WLS S+FF QFF Y P+ FG+K D NG
Sbjct: 366 RGDLWISWEEGQKVFEELLLDGDWSLNAGNWQWLSASTFFHQFFRVYSPIAFGKKTDKNG 425
Query: 307 DFI 309
D+I
Sbjct: 426 DYI 428
>gi|156361145|ref|XP_001625380.1| predicted protein [Nematostella vectensis]
gi|156212211|gb|EDO33280.1| predicted protein [Nematostella vectensis]
Length = 463
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 173/294 (58%), Positives = 217/294 (73%), Gaps = 3/294 (1%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEE 78
II++NGG PLTY +F S++ + P P + P + TPL D+HDE YGVPT+EE
Sbjct: 156 IIDRNGGTPPLTYKKFLSVIEGIAPPDPPVPHIDPSAQKLGHTPLSDNHDELYGVPTMEE 215
Query: 79 LGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
LG + L W GGETEA++RL+RHLERKAW+ASFG+PK+T SL+AS +G+SP+LRF
Sbjct: 216 LGLETSKLFVEVWHGGETEALKRLDRHLERKAWIASFGKPKVTSDSLMASPSGVSPYLRF 275
Query: 139 GCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQI 198
GCLS RLFY+ L LY+++K PPP SL+GQLLWREFF+ +T NPNFD+M NPIC+ I
Sbjct: 276 GCLSPRLFYYRLMDLYRKVKGGPPPTSLYGQLLWREFFFVVSTNNPNFDKMESNPICLYI 335
Query: 199 PWDVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
W + + L KW +AQTGFPWIDAIM+QL++EGWIH+LAR AVA FLTRG LW+SWE
Sbjct: 336 KWRTDKQVASDLQKWTDAQTGFPWIDAIMSQLKQEGWIHYLARVAVASFLTRGCLWISWE 395
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
GMK+F E LLDADWS NAG WMW S S+F QQFF+ CPV+F + + FI
Sbjct: 396 AGMKVFAEHLLDADWSSNAGNWMWWSYSAFSQQFFNPPCPVEFSNYSGDSLFFI 449
>gi|147906624|ref|NP_001081421.1| 6-4 photolyase [Xenopus laevis]
gi|8809676|dbj|BAA97126.1| 6-4 photolyase [Xenopus laevis]
gi|213625040|gb|AAI69683.1| 6-4 photolyase [Xenopus laevis]
gi|213627768|gb|AAI69685.1| 6-4 photolyase [Xenopus laevis]
Length = 526
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 223/306 (72%), Gaps = 2/306 (0%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPL 63
+ +K++ +L RII +N GK PLTY +FQ+++A + P P +AP + + TP
Sbjct: 124 VIQKVSNTLYDIDRIIAENNGKPPLTYVRFQTVLAPLGPPKRPIKAPTLENM-KDCHTPW 182
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
+ +DEKYGVPTLEELG D L P + GGE+EA+ RL+ H++R +WV +F +P+ P
Sbjct: 183 KSSYDEKYGVPTLEELGQDPMKLGPHLYPGGESEALSRLDLHMKRTSWVCNFKKPETEPN 242
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SL S T LSP+++FGCLS R F+ + +Y+ K + PP+SLHGQLLWREF+Y
Sbjct: 243 SLTPSTTVLSPYVKFGCLSARTFWWKIADIYQGKKHSDPPVSLHGQLLWREFYYTTGAGI 302
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNF++M GNP+CVQ+ WD N E L W+ +TG+P+IDAIMTQLR EGWIHHLARHAVAC
Sbjct: 303 PNFNKMEGNPVCVQVDWDNNKEHLEAWSEGRTGYPFIDAIMTQLRTEGWIHHLARHAVAC 362
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEG K+F+ELLLDADWS+NAG W+WLS S+FF QFF Y PV FG+K D
Sbjct: 363 FLTRGDLWISWEEGQKVFEELLLDADWSLNAGNWLWLSASAFFHQFFRVYSPVAFGKKTD 422
Query: 304 PNGDFI 309
NGD+I
Sbjct: 423 KNGDYI 428
>gi|327282060|ref|XP_003225762.1| PREDICTED: cryptochrome-1-like [Anolis carolinensis]
Length = 530
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 221/306 (72%), Gaps = 2/306 (0%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSP-SPAEAPVTPLLVRQATTPL 63
+ +K++ +L + RII +N GK PLTY + Q++VA + P P AP + + TP+
Sbjct: 123 VIQKVSHTLYDTERIIVENSGKAPLTYTRLQTLVASLGPPKQPVPAPKLEDM-KDCCTPV 181
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
++DHD +YG P+ EELG D + P + GGETEA+ RL+ H++R +WV +F +P+ P
Sbjct: 182 KEDHDLEYGTPSYEELGQDPKTAGPHLYPGGETEALARLDLHMKRTSWVCNFKKPETHPN 241
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SL S T LSP+++FGCLS R+F+ L ++Y+ K + PP+SLHGQLLWREFFY A
Sbjct: 242 SLTPSTTVLSPYVKFGCLSVRMFWWKLAEVYQGRKHSDPPVSLHGQLLWREFFYTAGAGI 301
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNFDRM NP+CVQ+ WD N E L W QTG+P+IDAIMTQLR EGWIHHLARHAVAC
Sbjct: 302 PNFDRMENNPVCVQVDWDNNQEYLRAWREGQTGYPFIDAIMTQLRTEGWIHHLARHAVAC 361
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEG K+F+ELLLDADWS+NA W WLS S+FF QFF Y PV FG+K D
Sbjct: 362 FLTRGDLWISWEEGQKVFEELLLDADWSLNAANWQWLSASAFFHQFFRVYSPVTFGKKTD 421
Query: 304 PNGDFI 309
NG++I
Sbjct: 422 KNGEYI 427
>gi|432852920|ref|XP_004067451.1| PREDICTED: cryptochrome-1-like [Oryzias latipes]
Length = 521
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/303 (55%), Positives = 215/303 (70%), Gaps = 3/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRDD 66
K++ +L RIIE+N GK PLTY++ + IV + SP P AP + + P +
Sbjct: 127 KISHTLYDIDRIIEENNGKPPLTYNRLRDIVKALGSPKKPIPAPTVEDM--KNIAPFSEK 184
Query: 67 HDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
H +YG+P+LEELG D L + GGE EA+RRL+ +++R WV SF +P +P SL
Sbjct: 185 HKPEYGIPSLEELGLDTSSLAEEIFPGGEQEALRRLDTYMQRPGWVCSFEKPNTSPNSLS 244
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
S T LSP++ FGCLS R F+ L ++Y+ K + PP+SLHGQLLWREFFY A+ PNF
Sbjct: 245 PSTTVLSPYVTFGCLSARTFWWRLAEVYQGKKHSDPPVSLHGQLLWREFFYTASVGIPNF 304
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
++M GNP C Q+ WD N E LA W A+TGFP+IDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 305 NKMTGNPACTQVDWDENQEYLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLT 364
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEG K+F++LLLD DW++NAG W WLS S+FF QFF Y PV FG+K D NG
Sbjct: 365 RGDLWISWEEGQKVFEKLLLDGDWALNAGNWQWLSASTFFHQFFRVYSPVAFGKKTDKNG 424
Query: 307 DFI 309
D+I
Sbjct: 425 DYI 427
>gi|348500170|ref|XP_003437646.1| PREDICTED: cryptochrome-1-like [Oreochromis niloticus]
Length = 522
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 168/303 (55%), Positives = 220/303 (72%), Gaps = 2/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRDD 66
K++ +L + RIIE+N GK PLTY + Q+IV + P P AP + + TP ++
Sbjct: 127 KVSHTLYNIDRIIEENNGKPPLTYTKLQAIVKTIGPPKRPIPAPTMDDM-KDVKTPSSEN 185
Query: 67 HDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
H+++YG+PTLEELG D L + GGE EA+RRL+ H++R WV SF +P+ +P SL
Sbjct: 186 HEKEYGIPTLEELGLDTAPLGEDLFPGGEQEALRRLDEHMKRTKWVCSFEKPQTSPNSLS 245
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
S T LSP++ FGCLS R F+ L ++Y+ K + PP+SLHGQLLWREFFY A+ PNF
Sbjct: 246 PSTTVLSPYVTFGCLSVRTFWWRLTEVYRGNKHSDPPVSLHGQLLWREFFYTASLGIPNF 305
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
++M GN +C Q+ WD N + LA W A+TG+P+IDAIMTQLR+EGWIHHLARHAVACFLT
Sbjct: 306 NKMEGNSVCTQVDWDTNPDYLAAWREARTGYPFIDAIMTQLRQEGWIHHLARHAVACFLT 365
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW+SWEEG K+F++LLLD DW++NAG W WLS S+FF Q+F Y PV FG+K D NG
Sbjct: 366 RGDLWISWEEGQKVFEQLLLDGDWALNAGNWQWLSASTFFHQYFRVYSPVAFGKKTDKNG 425
Query: 307 DFI 309
D+I
Sbjct: 426 DYI 428
>gi|183986194|gb|AAI66277.1| LOC100144974 protein [Xenopus (Silurana) tropicalis]
Length = 531
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 221/306 (72%), Gaps = 2/306 (0%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPL 63
+ +K++ +L + RII +N GK PLTY +FQ+++A + P P + P T ++ T
Sbjct: 124 VIQKVSNTLYAIDRIIAENNGKPPLTYVRFQTVLASLGPPKRPVQVP-TQENMKDCCTLW 182
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
+ ++EKYGVPTLEELG D L P + GGE+EA+ RLE H++R WV +F +P+ P
Sbjct: 183 KSSYNEKYGVPTLEELGQDSLKLGPRLYPGGESEALSRLELHMKRTTWVCNFKKPETEPN 242
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SL S T LSP+++FGCLS R F+ + ++Y+ K + PP+SLHGQLLWREFFY A
Sbjct: 243 SLTPSTTVLSPYVKFGCLSARTFWWRIAEIYQGKKHSDPPVSLHGQLLWREFFYTAGVGI 302
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNF++M GN +CVQ+ W N E L W+ +TG+P+IDAIMTQLR EGWIHHLARHAVAC
Sbjct: 303 PNFNKMEGNTVCVQVDWGNNKEHLQAWSEGRTGYPFIDAIMTQLRTEGWIHHLARHAVAC 362
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEG K+F+ELLLDADWS+NAG W WLS S+FF QFF Y PV FG+K D
Sbjct: 363 FLTRGDLWISWEEGQKVFEELLLDADWSLNAGNWQWLSASTFFHQFFRVYSPVAFGKKTD 422
Query: 304 PNGDFI 309
NGD+I
Sbjct: 423 KNGDYI 428
>gi|187608706|ref|NP_001120012.1| uncharacterized protein LOC100144974 [Xenopus (Silurana)
tropicalis]
gi|165970470|gb|AAI58310.1| LOC100144974 protein [Xenopus (Silurana) tropicalis]
Length = 531
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 221/306 (72%), Gaps = 2/306 (0%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPL 63
+ +K++ +L + RII +N GK PLTY +FQ+++A + P P + P T ++ T
Sbjct: 124 VIQKVSNTLYAIDRIIAENNGKPPLTYVRFQTVLASLGPPKRPVQVP-TQENMKDCCTLW 182
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
+ ++EKYGVPTLEELG D L P + GGE+EA+ RLE H++R WV +F +P+ P
Sbjct: 183 KSSYNEKYGVPTLEELGQDSLKLGPRLYPGGESEALSRLELHMKRTTWVCNFKKPETEPN 242
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SL S T LSP+++FGCLS R F+ + ++Y+ K + PP+SLHGQLLWREFFY A
Sbjct: 243 SLTPSTTVLSPYVKFGCLSARTFWWRIAEIYQGKKHSDPPVSLHGQLLWREFFYTAGVGI 302
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNF++M GN +CVQ+ W N E L W+ +TG+P+IDAIMTQLR EGWIHHLARHAVAC
Sbjct: 303 PNFNKMEGNIVCVQVDWGNNKEHLQAWSEGRTGYPFIDAIMTQLRTEGWIHHLARHAVAC 362
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEG K+F+ELLLDADWS+NAG W WLS S+FF QFF Y PV FG+K D
Sbjct: 363 FLTRGDLWISWEEGQKVFEELLLDADWSLNAGNWQWLSASTFFHQFFRVYSPVAFGKKTD 422
Query: 304 PNGDFI 309
NGD+I
Sbjct: 423 KNGDYI 428
>gi|301622212|ref|XP_002940429.1| PREDICTED: cryptochrome-1-like [Xenopus (Silurana) tropicalis]
Length = 531
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 220/306 (71%), Gaps = 2/306 (0%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPL 63
+ +K++ +L + RII +N GK PLTY +FQ+++A + P P + P T ++ T
Sbjct: 124 VIQKVSNTLYAIDRIIAENNGKPPLTYVRFQTVLALLGPPKRPVQVP-TQENMKDCCTLW 182
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
+ ++EKYGVPTLEELG D L P + GGE+EA+ RLE H++R WV +F +P+ P
Sbjct: 183 KSSYNEKYGVPTLEELGQDSLKLGPRLYPGGESEALSRLELHMKRTTWVCNFKKPETEPN 242
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SL S T LSP+++FGCLS R F+ + +Y+ K + PP+SLHGQLLWREFFY A
Sbjct: 243 SLTPSTTVLSPYVKFGCLSARTFWWRIADIYQGKKHSDPPVSLHGQLLWREFFYTAGVGI 302
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNF++M GN +CVQ+ W N E L W+ +TG+P+IDAIMTQLR EGWIHHLARHAVAC
Sbjct: 303 PNFNKMEGNTVCVQVDWGNNKEHLQAWSEGRTGYPFIDAIMTQLRTEGWIHHLARHAVAC 362
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEG K+F+ELLLDADWS+NAG W WLS S+FF QFF Y PV FG+K D
Sbjct: 363 FLTRGDLWISWEEGQKVFEELLLDADWSLNAGNWQWLSASTFFHQFFRVYSPVAFGKKTD 422
Query: 304 PNGDFI 309
NGD+I
Sbjct: 423 KNGDYI 428
>gi|148226272|ref|NP_001088990.1| Cry1 protein [Xenopus laevis]
gi|49899105|gb|AAH76838.1| Cry1 protein [Xenopus laevis]
Length = 556
Score = 357 bits (915), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 169/306 (55%), Positives = 214/306 (69%), Gaps = 3/306 (0%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+ K+ +L + I+ N GK PLTY F +++ + P +T + TTP
Sbjct: 125 VVSKVAHTLYDVKSILALNYGKPPLTYKNFLRVLSVLGDPDKPARQITLEDFIKCTTPTE 184
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
+E Y +P E+LG I P WKGGE+EA+ RLE+HLE++ WVA+F +P+ P S
Sbjct: 185 FAAEEYYRIPKPEDLG--ICRDCAPNWKGGESEALCRLEQHLEKQGWVANFQKPQTVPNS 242
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LL S TGLSP+ FGCLS R+FYH L+ +Y + K + PP+SL GQLLWREFFY AA+
Sbjct: 243 LLPSTTGLSPYFSFGCLSARVFYHRLSNIYAQSKNHSLPPVSLQGQLLWREFFYTAASST 302
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNF M+GNPIC+QI W N E L KW +TGFPWIDAIM QL EEGWIHHLARHAVAC
Sbjct: 303 PNFTHMVGNPICLQIEWYKNEEQLQKWREGKTGFPWIDAIMAQLHEEGWIHHLARHAVAC 362
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDAD+S+NAG WMWLS S+FF + +CPV+FGR+ D
Sbjct: 363 FLTRGDLWISWEEGMKVFEELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTD 422
Query: 304 PNGDFI 309
P G++I
Sbjct: 423 PEGNYI 428
>gi|197246983|gb|AAI64413.1| Cry4 protein [Danio rerio]
Length = 558
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 163/302 (53%), Positives = 216/302 (71%), Gaps = 5/302 (1%)
Query: 9 LTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD 68
++ +L +RI++ NGG PLTY +F +++ + P V+ ++ TP+ D D
Sbjct: 129 ISHTLYDVKRIVKANGGSPPLTYKKFLHVLSVLGEPEKPARDVSIEDFQRCVTPV--DVD 186
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
Y VP+L +LG +E + W GGE+ A++RLE+H + + WVA+F +P+ P SLL S
Sbjct: 187 RVYAVPSLADLGLQVEAEV--LWPGGESHALQRLEKHFQSQGWVANFSKPRTIPNSLLPS 244
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFD 187
TGLSP+L GCLS R FYH LN +Y + K + PP+SL GQ+LWREFFY A+ PNF
Sbjct: 245 TTGLSPYLSLGCLSVRTFYHRLNSIYAQSKNHSLPPVSLQGQVLWREFFYTVASATPNFT 304
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
+M GN IC+QI W + E L KW AQTGFPWIDAIMTQLR+EGWIHHLARHAVACFLTR
Sbjct: 305 KMEGNSICLQIDWYHDPERLEKWRTAQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTR 364
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
GDLW++WEEGMK+F+E LLDAD+SVNAG WMWLS S+FF ++ +CPV+FGR+ DP G+
Sbjct: 365 GDLWITWEEGMKVFEEFLLDADYSVNAGNWMWLSASAFFHKYTRIFCPVRFGRRTDPQGE 424
Query: 308 FI 309
++
Sbjct: 425 YL 426
>gi|170065332|ref|XP_001867895.1| cryptochrome-1 [Culex quinquefasciatus]
gi|167882412|gb|EDS45795.1| cryptochrome-1 [Culex quinquefasciatus]
Length = 539
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/309 (54%), Positives = 218/309 (70%), Gaps = 9/309 (2%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+EK LT+ P I++KNGGK PLTY ++ S+ + +P P P V + P +
Sbjct: 113 VEKSLTIYDPDE--ILKKNGGKIPLTYQKYGSLASMCKTPGPIGVPDK---VPAESVPEK 167
Query: 65 DDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
D + K Y PTL+EL E L + GGETEA+RRL+ ++ RK+WV +F +P
Sbjct: 168 DKRERKDGKCYDPPTLDELKVRQEDLGECKFPGGETEALRRLQDYMSRKSWVCAFEKPNT 227
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
+P SL S T LSP+++FGCLS RLF +L K+ K + PP+SL GQL+WREF+YCAA
Sbjct: 228 SPNSLEPSTTVLSPYVKFGCLSARLFMAELKKVLAGQKHSQPPVSLVGQLMWREFYYCAA 287
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
PNFD+M+GN +C+Q+PW+ N E LA W + +TG+P+IDAIM QLR+EGWIHHLARHA
Sbjct: 288 AAEPNFDKMVGNSVCLQVPWETNPEHLAAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHA 347
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEG ++F+ELLLDADW++NAG WMWLS S+FF QFF Y PV FG+
Sbjct: 348 VACFLTRGDLWISWEEGQRVFEELLLDADWALNAGNWMWLSASAFFHQFFRVYSPVAFGK 407
Query: 301 KADPNGDFI 309
K DP G +I
Sbjct: 408 KTDPEGKYI 416
>gi|27882257|gb|AAH44385.1| Cry4 protein [Danio rerio]
Length = 579
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 163/302 (53%), Positives = 216/302 (71%), Gaps = 5/302 (1%)
Query: 9 LTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD 68
++ +L +RI++ NGG PLTY +F +++ + P V+ ++ TP+ D D
Sbjct: 150 ISHTLYDVKRIVKANGGSPPLTYKKFLHVLSVLGEPEKPARDVSIEDFQRCVTPV--DVD 207
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
Y VP+L +LG +E + W GGE+ A++RLE+H + + WVA+F +P+ P SLL S
Sbjct: 208 RVYAVPSLADLGLQVEAEV--LWPGGESHALQRLEKHFQSQGWVANFSKPRTIPNSLLPS 265
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFD 187
TGLSP+L GCLS R FYH LN +Y + K + PP+SL GQ+LWREFFY A+ PNF
Sbjct: 266 TTGLSPYLSLGCLSVRTFYHRLNSIYAQSKNHSLPPVSLQGQVLWREFFYTVASATPNFT 325
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
+M GN IC+QI W + E L KW AQTGFPWIDAIMTQLR+EGWIHHLARHAVACFLTR
Sbjct: 326 KMEGNSICLQIDWYHDPERLEKWRTAQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTR 385
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
GDLW++WEEGMK+F+E LLDAD+SVNAG WMWLS S+FF ++ +CPV+FGR+ DP G+
Sbjct: 386 GDLWITWEEGMKVFEEFLLDADYSVNAGNWMWLSASAFFHKYTRIFCPVRFGRRTDPQGE 445
Query: 308 FI 309
++
Sbjct: 446 YL 447
>gi|327271582|ref|XP_003220566.1| PREDICTED: cryptochrome-1-like [Anolis carolinensis]
Length = 438
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/297 (56%), Positives = 213/297 (71%), Gaps = 9/297 (3%)
Query: 17 RRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVR--QATTPL-RDDHDEKYGV 73
R+I+E N G PLTY +F I+ + P E PV L Q PL +D DE Y V
Sbjct: 45 RKIVELNRGTPPLTYKRFLQILTTLGDP---EMPVEDLTAENSQKLCPLPEEDLDECYRV 101
Query: 74 PTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLS 133
P E+LG E L P W+GGET ++RLE H++ + W+A F +P+ P SLL S TGLS
Sbjct: 102 PLPEDLGISKEHLSP--WRGGETTGLQRLEEHMKNQGWIAKFTKPRTIPNSLLPSTTGLS 159
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGN 192
P+ GCLS R+F++ L+K+Y + K + PP+SL GQLLWREFFY A+ PNF +M+GN
Sbjct: 160 PYFSLGCLSVRMFFYRLSKIYAQSKNHSLPPVSLQGQLLWREFFYTVASATPNFTKMVGN 219
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
PIC+QI W + E L KW AQTGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+
Sbjct: 220 PICLQIEWYEDAEKLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWI 279
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
SWEEGMK+F+ELLLD+D+S+NAG WMWLS S+FF Q+ +CPV+FG++ DP G +I
Sbjct: 280 SWEEGMKVFEELLLDSDYSINAGNWMWLSASAFFHQYSRIFCPVRFGKRTDPEGHYI 336
>gi|379326851|gb|AFD01671.1| cryptochrome 1, partial [Parus major]
Length = 281
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 163/202 (80%), Positives = 179/202 (88%), Gaps = 1/202 (0%)
Query: 109 KAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLH 167
KAWVA+F RP+M SLLAS TGLSP+LRFGCLS RLFY L LYK++K+ + PPLSL+
Sbjct: 1 KAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKENSSPPLSLY 60
Query: 168 GQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQL 227
GQLLWREFFY AAT NP FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQL
Sbjct: 61 GQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQL 120
Query: 228 REEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQ 287
R+EGWIHHLARHAVACFLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQ
Sbjct: 121 RQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQ 180
Query: 288 QFFHCYCPVKFGRKADPNGDFI 309
QFFHCYCPV FGR+ DPNGD+I
Sbjct: 181 QFFHCYCPVGFGRRTDPNGDYI 202
>gi|157115313|ref|XP_001658195.1| DNA photolyase [Aedes aegypti]
gi|108883518|gb|EAT47743.1| AAEL001175-PA [Aedes aegypti]
Length = 553
Score = 352 bits (904), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 167/310 (53%), Positives = 215/310 (69%), Gaps = 9/310 (2%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL 63
IEK LT+ P + I++ N G+ PLTY ++ S+ + + P P TP + P
Sbjct: 133 QIEKSLTIYDPDA--ILKMNAGRPPLTYQKYGSLASTLKIPEPV---ATPKEIPSDCVPK 187
Query: 64 RDDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPK 119
+D ++ K Y P L ELG E L + GGETEA+RRLE H++RK+WV SF +P
Sbjct: 188 QDSNERKRANCYDPPLLVELGVKEEDLGECKFPGGETEALRRLEDHMKRKSWVCSFEKPN 247
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCA 179
+P SL S T LSP+++FGCLS RLF +L + K K + PP+SL GQL+WREF+YCA
Sbjct: 248 TSPNSLEPSTTVLSPYVKFGCLSARLFMRELQTVIKGQKHSQPPVSLIGQLMWREFYYCA 307
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
A PNFD+M+GN IC+ +PWD N E L W + +TG+P+IDAIM QLR+EGWIHHLARH
Sbjct: 308 AADEPNFDKMVGNSICLHVPWDSNKEFLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARH 367
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
AVACFLTRGDLW+SWEEG ++F+E LLDADW++NAG WMWLS S+FF Q+F Y PV FG
Sbjct: 368 AVACFLTRGDLWISWEEGQRVFEEFLLDADWALNAGNWMWLSASAFFHQYFRVYSPVAFG 427
Query: 300 RKADPNGDFI 309
+K DP G FI
Sbjct: 428 KKTDPEGKFI 437
>gi|18858471|ref|NP_571862.1| cryptochrome 4 [Danio rerio]
gi|8698594|dbj|BAA96851.1| cryptochrome 4 [Danio rerio]
Length = 558
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/299 (54%), Positives = 212/299 (70%), Gaps = 5/299 (1%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKY 71
+L +RI++ NGG PLTY +F +++ + P V+ ++ TP+ D D Y
Sbjct: 132 TLYDVKRIVKANGGSPPLTYKKFLHVLSVLGEPEKPARDVSIEDFQRCVTPV--DVDRVY 189
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
VP+L LG +E + W GGE+ A++RLE+H + + WVA+F +P+ P SLL S TG
Sbjct: 190 AVPSLAHLGLQVEAEV--LWPGGESHALQRLEKHFQSQGWVANFSKPRTIPNSLLPSTTG 247
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRML 190
LSP+L GCLS R FYH LN +Y + K + PP+SL GQ+LWREFFY A+ PNF +M
Sbjct: 248 LSPYLSLGCLSVRTFYHRLNCIYAQSKNHSLPPVSLQGQVLWREFFYTVASATPNFTKME 307
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
GN IC+QI W + E L KW AQTGFPWIDAIMTQL +EGWIHHLARHAVACFLTRGDL
Sbjct: 308 GNSICLQIDWYHDPERLEKWRTAQTGFPWIDAIMTQLLQEGWIHHLARHAVACFLTRGDL 367
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W+SWEEGMK+F+E LLDAD+SVNAG WMWLS S+FF ++ +CPV+FGR+ DP G+++
Sbjct: 368 WISWEEGMKVFEEFLLDADYSVNAGNWMWLSASAFFHKYTRIFCPVRFGRRTDPQGEYL 426
>gi|76880306|dbj|BAE45919.1| cryptochrome [Hyla japonica]
Length = 377
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 172/250 (68%), Positives = 200/250 (80%), Gaps = 7/250 (2%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTP+
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITAEVMGKCTTPVS 183
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
DDHDEKYGVP+LEELGFD EGL W GGETEA+ RLERHLERKAWVA+F RP+M S
Sbjct: 184 DDHDEKYGVPSLEELGFDTEGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS 243
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
LLAS TGLSP+LRFGCLS LFY L LYK +KK + PPLSL+GQLLWREFFY AAT N
Sbjct: 244 LLASTTGLSPYLRFGCLSCCLFYFKLTDLYKMVKKNSSPPLSLYGQLLWREFFYTAATNN 303
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 304 PRFDKMEGNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 244 FLTRGDLWVS 253
FLTRGDLW+S
Sbjct: 364 FLTRGDLWIS 373
>gi|194332801|ref|NP_001123706.1| uncharacterized protein LOC100170456 [Xenopus (Silurana)
tropicalis]
gi|189442599|gb|AAI67313.1| LOC100170456 protein [Xenopus (Silurana) tropicalis]
Length = 557
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 161/299 (53%), Positives = 210/299 (70%), Gaps = 3/299 (1%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKY 71
+L ++I+ N GK PLTY F +++ + +P +T + TP + +E Y
Sbjct: 132 TLYDIKKILALNCGKPPLTYKNFLRVLSMLGNPDKPARQITSEDFIKCITPTKLAAEEYY 191
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
+P E+LG I P W GGE+EA+ RLE+HLE++ WVA+F +P+ P SLL S TG
Sbjct: 192 RIPKPEDLG--ISKDCPTNWIGGESEALSRLEQHLEKQGWVANFKKPQTIPNSLLPSTTG 249
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRML 190
LSP+ GCLS R+F+H L+ +Y + K + PP+SL GQLLWREFFY A+ PNF M+
Sbjct: 250 LSPYFSLGCLSVRVFFHRLSNIYAQSKNHSLPPVSLQGQLLWREFFYTVASSTPNFTHMV 309
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
GNPIC+QI W N E L KW A+TGFPWIDAIMTQL EGWIHHLARHAVACFLTRGDL
Sbjct: 310 GNPICLQIDWYKNEEQLQKWKEAKTGFPWIDAIMTQLHNEGWIHHLARHAVACFLTRGDL 369
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W+SWEEGMK+F+E LLDAD+ +NAG WMWLS S+FF + +CPV+FG+++DP G++I
Sbjct: 370 WISWEEGMKVFEEFLLDADYCINAGNWMWLSASAFFHHYTRIFCPVRFGKRSDPEGNYI 428
>gi|312378885|gb|EFR25332.1| hypothetical protein AND_09443 [Anopheles darlingi]
Length = 558
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 163/313 (52%), Positives = 214/313 (68%), Gaps = 8/313 (2%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+++ +E T+ P + I+++NGGK PLTY ++ S+ + P P AP L +
Sbjct: 130 VTTHVEVSHTIFHPET--IVKRNGGKPPLTYQKYVSLASACTIPLPLPAPQK--LPGKGV 185
Query: 61 TPLRDDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFG 116
P +D + K Y PT+ EL D LL + GGETEA+ R+E+ L RKAW+ SF
Sbjct: 186 EPEKDSQERKDQSCYDPPTMNELDIDEGSLLECKFPGGETEALSRMEQCLSRKAWICSFE 245
Query: 117 RPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFF 176
+P +P SL S T LSP+L+FGCLS RLFY + + K K + PP+SL GQ++WREF+
Sbjct: 246 KPNTSPNSLEPSTTVLSPYLKFGCLSARLFYSRIQETIKGQKHSQPPVSLIGQMMWREFY 305
Query: 177 YCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHL 236
YC A PNFD+M GN +C+Q+ WD N E L W +TG+P+IDAIM QLR+EGWIHHL
Sbjct: 306 YCVAAVTPNFDKMSGNDVCIQVDWDTNKEYLNAWTEGRTGYPFIDAIMRQLRQEGWIHHL 365
Query: 237 ARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV 296
ARHAVACFLTRGDLW+SWEEG ++F+ELLLDADW++NAG WMWLS S+FF Q+F Y PV
Sbjct: 366 ARHAVACFLTRGDLWISWEEGQRVFEELLLDADWALNAGNWMWLSASAFFHQYFRVYSPV 425
Query: 297 KFGRKADPNGDFI 309
FG+K DP G +I
Sbjct: 426 AFGKKTDPEGKYI 438
>gi|110626125|ref|NP_001034685.1| cryptochrome 4 [Gallus gallus]
gi|34500076|gb|AAQ73619.1| cryptochrome-like protein [Gallus gallus]
Length = 529
Score = 346 bits (888), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 210/300 (70%), Gaps = 6/300 (2%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRDDHDEK 70
SL +++RI+E NGG PLTY +F I++ + P P P Q +P E
Sbjct: 132 SLYNTQRILELNGGTPPLTYKRFLRILSLLGDPEVPVRNPTAEDF--QRCSPPELGLAEC 189
Query: 71 YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
YGVP +L E + P W+GGE+E ++RLE+HL + WVASF +PK P SLL S T
Sbjct: 190 YGVPLPTDLKIPPESISP--WRGGESEGLQRLEQHLADQGWVASFTKPKTVPNSLLPSTT 247
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRM 189
GLSP+ GCLS R F++ L+ +Y + K + PP+SL GQLLWREFFY A+ PNF +M
Sbjct: 248 GLSPYFSTGCLSVRSFFYRLSNIYAQAKHHSLPPVSLQGQLLWREFFYTVASATPNFTKM 307
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
GNPIC+QI W + E L KW AQTGFPWIDAIMTQLR+EGWIHHLARHA ACFLTRGD
Sbjct: 308 AGNPICLQIRWYEDAERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTRGD 367
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LW+SWEEGMK+F+ELLLDAD+S+NAG WMWLS S+FF + +CPV+FGR+ DP G +I
Sbjct: 368 LWISWEEGMKVFEELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTDPEGQYI 427
>gi|224085023|ref|XP_002198533.1| PREDICTED: cryptochrome-1-like [Taeniopygia guttata]
Length = 527
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 212/301 (70%), Gaps = 8/301 (2%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVR--QATTPLRDDHDE 69
SL +++RI++ NGG PLTY +F I++ + P E PV L Q E
Sbjct: 132 SLYNTQRILDLNGGSPPLTYKRFLHILSLLGDP---ELPVRNLTAEDFQRCRAPEPGLAE 188
Query: 70 KYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ 129
Y VP +L E L P W+GGETE +RRLE+HL + WV SF +P+ +P SLL S
Sbjct: 189 CYRVPLPVDLKISPESLSP--WRGGETEGLRRLEQHLIDQGWVTSFAKPRTSPNSLLPST 246
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDR 188
TGLSP+ GCLS R F++ L+ +Y + K + PP+SL GQLLWREFFY A+ PNF +
Sbjct: 247 TGLSPYFSMGCLSVRTFFYRLSNIYAQAKHHSLPPVSLQGQLLWREFFYTVASATPNFTQ 306
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
M GNPIC+QI W + E L KW A+TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRG
Sbjct: 307 MAGNPICLQISWYKDAERLHKWKTAKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRG 366
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
DLW+SWEEGMK+F+ELLLDAD+S+NAG WMWLS S+FF Q+ +CPV+FG++ DP G++
Sbjct: 367 DLWISWEEGMKVFEELLLDADYSINAGNWMWLSASAFFHQYTRIFCPVRFGKRTDPQGNY 426
Query: 309 I 309
I
Sbjct: 427 I 427
>gi|158293404|ref|XP_314748.3| AGAP008651-PA [Anopheles gambiae str. PEST]
gi|157016689|gb|EAA10141.3| AGAP008651-PA [Anopheles gambiae str. PEST]
Length = 556
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 164/309 (53%), Positives = 211/309 (68%), Gaps = 8/309 (2%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
IEK T+ P I++KNGGK PLTY ++ ++ + P P PV L + T+P
Sbjct: 134 IEKSHTIFDPEG--IVKKNGGKPPLTYQRYATLASACKIPQPL--PVPQKLPAKETSPEA 189
Query: 65 DDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
D + K Y PT+EEL + + + GGE+EA+RR+ L RKAWV F +P
Sbjct: 190 DKEERKNPSCYDPPTMEELDIEEASMGQCKFPGGESEALRRMNEILSRKAWVCKFEKPNT 249
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
+P SL S T LSP+L+FGCLS RLFY + + K K + PP+SL GQ++WREF+YC A
Sbjct: 250 SPNSLEPSTTVLSPYLKFGCLSVRLFYSRIAETIKGQKHSQPPVSLIGQVMWREFYYCVA 309
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
PN+D+M+GN IC QI WD N + L W + +TG+P+IDAIM QLR+EGWIHHLARHA
Sbjct: 310 AATPNYDKMVGNGICTQIDWDTNKDYLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHA 369
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWEEG ++F+ELLLDADW++NAG WMWLS S+FF Q+F Y PV FG+
Sbjct: 370 VACFLTRGDLWISWEEGQRVFEELLLDADWALNAGNWMWLSASAFFHQYFRVYSPVAFGK 429
Query: 301 KADPNGDFI 309
K DP G FI
Sbjct: 430 KTDPEGKFI 438
>gi|390339199|ref|XP_788938.2| PREDICTED: cryptochrome-2-like [Strongylocentrotus purpuratus]
Length = 524
Score = 342 bits (878), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 157/303 (51%), Positives = 214/303 (70%), Gaps = 1/303 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
K++ +L + R I+ N K P+TY + +++++ +P+ E P TP++ DH
Sbjct: 128 KVSHTLYDTERTIKANKYKPPMTYQRMVGLLSEIGAPAIPELPPLMANFTGVATPVKPDH 187
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
D +YGVP+LE+LG D+EGL P + GGETE ++R++ HL RK+WV F +PK +P SL
Sbjct: 188 DNEYGVPSLEDLGLDLEGLGPRLYPGGETEGLQRMDLHLARKSWVCGFEKPKTSPNSLEP 247
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLY-KRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
S T LSP+L++GCLS R FY+ + ++Y ++ PP+SL GQL+WREFFY A PNF
Sbjct: 248 STTVLSPYLKWGCLSPRKFYYAIKEVYAQQTNCTKPPVSLMGQLIWREFFYTVAAGTPNF 307
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
+M NPIC+Q+PWD N E LA W +TG+P+IDAIMTQLR EGWIHHLARH+ ACFLT
Sbjct: 308 HQMEENPICIQVPWDENPEFLAAWKEGRTGYPYIDAIMTQLRTEGWIHHLARHSAACFLT 367
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW SW +G ++FDE LLDAD+S+NA WMWLS S+FF Q++ Y PV FG+K D G
Sbjct: 368 RGDLWQSWVKGQEVFDEWLLDADYSLNAANWMWLSSSAFFHQYYRVYSPVVFGKKTDKTG 427
Query: 307 DFI 309
++I
Sbjct: 428 EYI 430
>gi|449271617|gb|EMC81901.1| Cryptochrome-1 [Columba livia]
Length = 525
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/301 (55%), Positives = 208/301 (69%), Gaps = 8/301 (2%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVR--QATTPLRDDHDE 69
SL ++RI++ NGG PLTY +F I++++ P E PV L Q E
Sbjct: 132 SLYDTKRILDLNGGSPPLTYKRFLHILSQLGDP---EVPVRNLTAEDFQRCMSPEPGLAE 188
Query: 70 KYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ 129
+Y VP +L + L P W GGETE +RRLE+HL + WVA+F +P+ P SLL S
Sbjct: 189 RYRVPVPADLEIPPQSLSP--WTGGETEGLRRLEQHLTDQGWVANFTKPRTIPNSLLPST 246
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDR 188
TGLSP+ GCLS R F+ L+ +Y + K + PP+SL GQLLWREFFY A+ NF +
Sbjct: 247 TGLSPYFSMGCLSVRTFFQRLSNIYAQAKHHSLPPVSLQGQLLWREFFYTVASATQNFTQ 306
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
M GNPIC+QI W + E L KW AQTGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRG
Sbjct: 307 MAGNPICLQIHWYEDAERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRG 366
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
DLW+SWEEGMK+F+ELLLDAD+S+NAG WMWLS S+FF + +CPV+FG++ DP G +
Sbjct: 367 DLWISWEEGMKVFEELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGKRTDPEGQY 426
Query: 309 I 309
I
Sbjct: 427 I 427
>gi|326933621|ref|XP_003212899.1| PREDICTED: cryptochrome-1-like [Meleagris gallopavo]
Length = 530
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/302 (55%), Positives = 212/302 (70%), Gaps = 9/302 (2%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVR--QATTPLRDDHDE 69
SL +++RI+E NGG PLTY +F I++ + P E P+ L Q +P E
Sbjct: 132 SLYNTQRILELNGGTPPLTYKRFLHILSLLGDP---EMPIRNLTAEDFQRCSPPELCLAE 188
Query: 70 KYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHL-ERKAWVASFGRPKMTPQSLLAS 128
Y VP +L E + P W+GGE+E ++RLE+HL +R WVASF +PK P SLL S
Sbjct: 189 CYRVPLPTDLKIPPESISP--WRGGESEGLQRLEQHLADRSGWVASFTKPKTVPNSLLPS 246
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFD 187
TGLSP+ GCLS R F++ L+ +Y + K + PP+SL GQLLWREFFY A+ PNF
Sbjct: 247 TTGLSPYFSMGCLSVRSFFYRLSNIYAQAKHHSLPPVSLQGQLLWREFFYTVASATPNFT 306
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
+M GNPIC+QI W + E L +W AQTGFPWIDAIMTQLR+EGWIHHLARHA ACFLTR
Sbjct: 307 KMAGNPICLQIRWYEDAERLHRWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTR 366
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
GDLW+SWEEGMK+F+ELLLDAD+S+NAG WMWLS S+FF + +CPV+FGR+ DP G
Sbjct: 367 GDLWISWEEGMKVFEELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTDPEGQ 426
Query: 308 FI 309
+I
Sbjct: 427 YI 428
>gi|321474453|gb|EFX85418.1| DNA photolyase 1 [Daphnia pulex]
Length = 524
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 163/311 (52%), Positives = 214/311 (68%), Gaps = 8/311 (2%)
Query: 2 SSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPA-EAPVTPLLVRQAT 60
S ++ K++ ++ ++ + NG K PLTY +FQS+VAK +P A AP L +Q
Sbjct: 127 SVTVVAKVSHTIYDLEKVFKANGNKAPLTYVKFQSVVAKFGTPEKALNAPGK--LPKQCQ 184
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
T L D KY VP LEE+ D+ GL ++GGETEA+ R+E+++ ++ WV F +P
Sbjct: 185 TLLLSD---KYNVPLLEEMQVDLTGLGKELYRGGETEALARMEKYMSQQDWVCKFSKPDT 241
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
+P S+ S T LSP+L+FGCLS RL YH L+++ K PP SL GQ+LWREF+Y
Sbjct: 242 SPNSIEPSTTVLSPYLKFGCLSPRLMYHRLHEIIDGRKHTSPPTSLTGQMLWREFYYTCG 301
Query: 181 TRNPNFDRMLGNPICVQIPWDVN--MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
PNF+RM+GNP+C QIPW V+ E W N +TG+P+IDAIM QLR EGWIHHLAR
Sbjct: 302 AYTPNFNRMVGNPVCKQIPWKVDPEDEHFVAWKNGRTGYPFIDAIMIQLRTEGWIHHLAR 361
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
HAVACFLTRGDLWVSWE G ++F+ELLLDADW++NAG WMWLS S+FF +F Y PV F
Sbjct: 362 HAVACFLTRGDLWVSWELGQQVFEELLLDADWALNAGNWMWLSASAFFHSYFRVYSPVAF 421
Query: 299 GRKADPNGDFI 309
G+K D +GD+I
Sbjct: 422 GKKTDKHGDYI 432
>gi|302745164|gb|ADL62685.1| cryptochrome 5, partial [Phreatichthys andruzzii]
Length = 411
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 164/284 (57%), Positives = 209/284 (73%), Gaps = 2/284 (0%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRDD 66
K++ +L + RIIE+N GK P+TY +F S+V + SP P AP T ++ +TP +D
Sbjct: 127 KISHTLYNIDRIIEENNGKPPMTYVRFLSVVNAIGSPKKPVPAP-TKEDMKGVSTPFFED 185
Query: 67 HDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
H+E++ +PTLE+LG D L P + GGE EA+RRL+ H+ER WV F +P+ +P S++
Sbjct: 186 HEEEFRIPTLEDLGLDTSSLGPNLFPGGEQEALRRLDEHMERTTWVCKFEKPQTSPNSII 245
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
S T LSP++RFGCLS R F+ L +Y+ + + PP+SLHGQLLWREFFY A PNF
Sbjct: 246 PSTTVLSPYIRFGCLSARTFWWRLADVYRGKQHSEPPVSLHGQLLWREFFYTTAVGIPNF 305
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
+RM GN CVQ+ WD N E LA W A+TGFP+IDAIMTQL +EGWIHHLARHAVACFLT
Sbjct: 306 NRMEGNRHCVQVDWDNNPEHLAAWREARTGFPFIDAIMTQLCQEGWIHHLARHAVACFLT 365
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFF 290
RGDLW+SWEEG K+F+ELLLDADWS+NAG W WLS S+FF QFF
Sbjct: 366 RGDLWISWEEGQKVFEELLLDADWSLNAGNWQWLSASAFFHQFF 409
>gi|193702257|ref|XP_001946012.1| PREDICTED: cryptochrome-1-like [Acyrthosiphon pisum]
Length = 535
Score = 340 bits (871), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 157/309 (50%), Positives = 213/309 (68%), Gaps = 6/309 (1%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+E+K++ ++ ++ ++ NGG P+TY +F S+V M P+P P ++
Sbjct: 138 VEQKVSHTIYNTELVLRANGGSVPMTYQKFVSVVGSM--PTPRRPIPAPDMLPSECLLDD 195
Query: 65 DDHDEKYGVPTLEEL----GFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
D ++ ++ VPTL+EL GF+ L P + GGE EA+RRLE +++ K WV F +P
Sbjct: 196 DLNNPEFDVPTLDELLTLKGFNPAELKPCLYPGGEKEALRRLEEYMKNKTWVCKFEKPNT 255
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
+P SL S T LSP+++FGCLS FY+ L ++ + PP+SL GQL WREF+Y
Sbjct: 256 SPNSLKPSTTVLSPYMKFGCLSASHFYYRLKEVIGNSPHSKPPVSLIGQLYWREFYYTVG 315
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
PNFD+M+GN IC Q+PWD N +AL W N +TG+P+IDAIM QLR+EGWIHHLARHA
Sbjct: 316 ASTPNFDKMVGNSICCQVPWDNNPDALEAWTNGKTGYPFIDAIMRQLRDEGWIHHLARHA 375
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDLW+SWE+G+ +F+ELLLDADWS+NAG WMWLS S+FF QFF Y PV FG+
Sbjct: 376 VACFLTRGDLWISWEKGLAVFEELLLDADWSMNAGNWMWLSASAFFHQFFRVYSPVAFGK 435
Query: 301 KADPNGDFI 309
K D +GD+I
Sbjct: 436 KTDKSGDYI 444
>gi|194759941|ref|XP_001962202.1| GF14557 [Drosophila ananassae]
gi|190615899|gb|EDV31423.1| GF14557 [Drosophila ananassae]
Length = 539
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 161/311 (51%), Positives = 215/311 (69%), Gaps = 8/311 (2%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL 63
+E + ++ + +I KN GK P+TY +F IV K+ P+ + P +++ P
Sbjct: 132 KVETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVEKLKLPTVLDLPEK---LKEKVQPP 188
Query: 64 RDDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPK 119
+DD +EK Y PT+E+L E L P + GGETEA+RR+E L+ + WVA F +P
Sbjct: 189 KDDIEEKDSEAYDCPTMEQLVKRPEDLGPLKFPGGETEALRRMEESLKDELWVARFEKPN 248
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR-IKKAPPPLSLHGQLLWREFFYC 178
P SL S T LSP+L+FGCLS+RLF+ L ++ KR K + PP+SL GQ++WREF+Y
Sbjct: 249 TAPNSLEPSTTVLSPYLKFGCLSSRLFHQRLKEILKRQTKHSQPPVSLIGQMMWREFYYT 308
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
A PNFDRMLGN C+QIPW+ + + L W QTG+P+IDAIM QLR+EGWIHHLAR
Sbjct: 309 VAAAEPNFDRMLGNVYCLQIPWEEHPDHLKAWTYGQTGYPFIDAIMRQLRQEGWIHHLAR 368
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
HAVACFLTRGDLW+SWEEG ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV F
Sbjct: 369 HAVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAF 428
Query: 299 GRKADPNGDFI 309
G+K DP G++I
Sbjct: 429 GKKTDPQGNYI 439
>gi|302745162|gb|ADL62684.1| cryptochrome 4, partial [Phreatichthys andruzzii]
Length = 274
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 152/250 (60%), Positives = 190/250 (76%), Gaps = 3/250 (1%)
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
TP DH++ Y VP+L +LG ++E W GGET A++RL++H + + WV SF + +
Sbjct: 27 TPAEADHEKTYAVPSLADLGLEVE--FDVLWPGGETHALQRLDKHFQSQGWVTSFSKTRT 84
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCA 179
P SLL S TGLSP+L GCLS R FYH L+ +Y + K + PPLSL GQ+LWREFFY
Sbjct: 85 VPNSLLPSSTGLSPYLSLGCLSVRTFYHQLSSVYAQSKNHSLPPLSLQGQVLWREFFYTV 144
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
A+ PNF +M GNPIC+QI W + EAL KW AQTGFPWIDAIMTQLR+EGWIHHLARH
Sbjct: 145 ASSTPNFTKMEGNPICLQIQWYHDPEALEKWRTAQTGFPWIDAIMTQLRQEGWIHHLARH 204
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
AVACFLTRGDLW+SWEEGMK+F+ELLLDAD+S+NAG WMWLS S+FF ++ +CPV+FG
Sbjct: 205 AVACFLTRGDLWISWEEGMKVFEELLLDADYSINAGNWMWLSASAFFHKYTRIFCPVRFG 264
Query: 300 RKADPNGDFI 309
R+ DP G ++
Sbjct: 265 RRTDPQGQYL 274
>gi|45643657|gb|AAS72904.1| cryptochrome 2 variant 1, partial [Passer domesticus]
Length = 361
Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 160/238 (67%), Positives = 196/238 (82%), Gaps = 7/238 (2%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATT---PLRDDHDEKYGVP 74
RIIE NG K PLTY +FQ+I+++M+ P + PV+ ++ +Q T ++++HD+ YGVP
Sbjct: 127 RIIELNGHKPPLTYKRFQAIISRMELP---KKPVSTVISQQMETCKVDIQENHDDVYGVP 183
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGF +GL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP
Sbjct: 184 SLEELGFPTDGLAPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSP 243
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY+ L +LYK++K+ + PPLSL+GQLLWREFFY AAT NP FDRM GNP
Sbjct: 244 YLRFGCLSCRLFYYRLWELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNP 303
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
IC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW
Sbjct: 304 ICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLW 361
>gi|45643659|gb|AAS72905.1| cryptochrome 2 variant 2 [Passer domesticus]
Length = 361
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 160/238 (67%), Positives = 196/238 (82%), Gaps = 7/238 (2%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATT---PLRDDHDEKYGVP 74
RIIE NG K PLTY +FQ+I+++M+ P + PV+ ++ +Q T ++++HD+ YGVP
Sbjct: 127 RIIELNGHKPPLTYKRFQAIISRMELP---KKPVSTVISQQMETCKVDIQENHDDVYGVP 183
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGF +GL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP
Sbjct: 184 SLEELGFPTDGLAPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSP 243
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY+ L +LYK++K+ + PPLSL+GQLLWREFFY AAT NP FDRM GNP
Sbjct: 244 YLRFGCLSCRLFYYRLWELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNP 303
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
IC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW
Sbjct: 304 ICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLW 361
>gi|326437928|gb|EGD83498.1| DNA photolyase [Salpingoeca sp. ATCC 50818]
Length = 540
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 165/309 (53%), Positives = 213/309 (68%), Gaps = 16/309 (5%)
Query: 12 SLPSSRRIIEKNGG--KTPLTYHQFQSIV-------AKMDSPSPAEAPVTPLLVRQATTP 62
+L + I K GG K PLTY F ++ A + +P+ + P + LVR T
Sbjct: 133 TLHDPEQYIAKAGGADKIPLTYSSFGTLFRRLGKVPAALSAPTKEDFPQSSTLVR---TD 189
Query: 63 LRDDHDEKYGVPTLEELGFD-IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMT 121
DDH ++ VP+L+++G++ + + GGETEA+ R+ RHL+RKAW+A F +PK +
Sbjct: 190 ALDDH--RFDVPSLKDMGYEWNDDEHEVRFPGGETEALERMRRHLQRKAWIAHFEKPKTS 247
Query: 122 PQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAA 180
P +L S TGLSP+L+FGCLS RLFYH+L ++Y + A PP+SLHGQLLWREFF+
Sbjct: 248 PNTLEPSTTGLSPYLKFGCLSPRLFYHELARVYAEYRDHAKPPVSLHGQLLWREFFHMCG 307
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
NFDRM GN IC QI WD N LA W NA+TG+PWIDA MTQLR EGW+HHLARHA
Sbjct: 308 YAVKNFDRMEGNRICRQIDWDTNDALLAAWENARTGYPWIDACMTQLRREGWLHHLARHA 367
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VACFLTRGDL+ SWE+G ++FD LL+DADW +N+ WMWLSCSSFF Q+F Y PV FG+
Sbjct: 368 VACFLTRGDLYQSWEKGAQVFDRLLVDADWHLNSANWMWLSCSSFFYQYFRVYSPVAFGK 427
Query: 301 KADPNGDFI 309
K DP+G +I
Sbjct: 428 KTDPSGAYI 436
>gi|125986217|ref|XP_001356872.1| GA15376 [Drosophila pseudoobscura pseudoobscura]
gi|54645198|gb|EAL33938.1| GA15376 [Drosophila pseudoobscura pseudoobscura]
Length = 533
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/295 (53%), Positives = 200/295 (67%), Gaps = 6/295 (2%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTP---LRDDHDEKYGVPT 75
+I KN GK P+TY +F S+V ++ P E P L ++A P + D Y PT
Sbjct: 147 VIAKNMGKAPITYQKFLSVVDQLKVPKVLELPEK--LAKKALPPKDEVEQQDDNAYDCPT 204
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPF 135
LE+L E L P + GGETE +RR++ L + WVA F +P P SL S T LSP+
Sbjct: 205 LEQLVKRPEDLGPNKFPGGETEGLRRMKESLRDELWVARFEKPNTAPNSLEPSTTVLSPY 264
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
L+FGCLS RLF+ L + KR K + PP+SL GQLLWREF+Y A PNFDRMLGN
Sbjct: 265 LKFGCLSARLFHQQLKAILKRQSKHSQPPVSLIGQLLWREFYYTVAAAEPNFDRMLGNVY 324
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
C+QIPW + L W + +TG+P+IDAIM QLR+EGWIHHLARHAVACFLTRGDLW+SW
Sbjct: 325 CLQIPWQEQADHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISW 384
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
EEG ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV FG+K DP G +I
Sbjct: 385 EEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYI 439
>gi|195484786|ref|XP_002090823.1| GE12583 [Drosophila yakuba]
gi|194176924|gb|EDW90535.1| GE12583 [Drosophila yakuba]
Length = 540
Score = 330 bits (845), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 212/310 (68%), Gaps = 8/310 (2%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+E + ++ + +I KN GK P+TY +F IV ++ P +P + T+P +
Sbjct: 133 VETYCSHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKLPKVLGSPEK---LTNITSPPK 189
Query: 65 DDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
D+ +++ Y PT+E+L E L P + GGETEA+RR+E L+ + WVA F +P
Sbjct: 190 DEVEQEDLAAYDCPTMEQLVKRPEELGPNKFPGGETEALRRMEDSLKDEIWVARFEKPNT 249
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCA 179
P SL S T LSP+L+FGCLS RLFY L ++ KR K + PP+SL GQL+WREF+Y
Sbjct: 250 APNSLEPSTTVLSPYLKFGCLSARLFYQKLTEIIKRQSKHSQPPVSLIGQLMWREFYYTV 309
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
A PNFDRMLGN C+QIPW + + L W + +TG+P+IDAIM QLR+EGWIHHLARH
Sbjct: 310 AAAEPNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARH 369
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
AVACFLTRGDLW+SWEEG ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV FG
Sbjct: 370 AVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFYQYFRVYSPVAFG 429
Query: 300 RKADPNGDFI 309
+K DP G +I
Sbjct: 430 KKTDPQGHYI 439
>gi|195351886|ref|XP_002042448.1| GM23319 [Drosophila sechellia]
gi|194124317|gb|EDW46360.1| GM23319 [Drosophila sechellia]
Length = 540
Score = 330 bits (845), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 159/311 (51%), Positives = 211/311 (67%), Gaps = 8/311 (2%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL 63
+E + ++ + +I KN GK P+TY +F IV ++ P P +++ TP
Sbjct: 132 KVETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVDQLKVPKVLGVPEK---LKKMPTPP 188
Query: 64 RDDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPK 119
+D+ ++K Y PT+E+L E L P + GGETEA+RR+E L+ + WVA F +P
Sbjct: 189 KDEVEQKDSAAYDCPTMEQLVKRPEELGPNKFPGGETEALRRMEESLKDEIWVARFEKPN 248
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYC 178
P SL S T LSP+L+FGCLS RLF L ++ KR K + PP+SL GQL+WREF+Y
Sbjct: 249 TAPNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYT 308
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
A PNFDRMLGN C+QIPW + + L W + +TG+P+IDAIM QLR+EGWIHHLAR
Sbjct: 309 VAAAEPNFDRMLGNVYCMQIPWQKHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLAR 368
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
HAVACFLTRGDLW+SWEEG ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV F
Sbjct: 369 HAVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAF 428
Query: 299 GRKADPNGDFI 309
G+K DP G +I
Sbjct: 429 GKKTDPQGHYI 439
>gi|195580452|ref|XP_002080051.1| GD21692 [Drosophila simulans]
gi|194192060|gb|EDX05636.1| GD21692 [Drosophila simulans]
Length = 540
Score = 329 bits (844), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 159/311 (51%), Positives = 211/311 (67%), Gaps = 8/311 (2%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL 63
+E + ++ + +I KN GK P+TY +F IV ++ P P +++ TP
Sbjct: 132 KVETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVDQLKVPKVLGVPEK---LKKMHTPP 188
Query: 64 RDDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPK 119
+D+ ++K Y PT+E+L E L P + GGETEA+RR+E L+ + WVA F +P
Sbjct: 189 KDEVEQKDSAAYDCPTMEQLVKRPEELGPNKFPGGETEALRRMEESLKDEIWVARFEKPN 248
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYC 178
P SL S T LSP+L+FGCLS RLF L ++ KR K + PP+SL GQL+WREF+Y
Sbjct: 249 TAPNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYT 308
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
A PNFDRMLGN C+QIPW + + L W + +TG+P+IDAIM QLR+EGWIHHLAR
Sbjct: 309 VAAAEPNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLAR 368
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
HAVACFLTRGDLW+SWEEG ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV F
Sbjct: 369 HAVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAF 428
Query: 299 GRKADPNGDFI 309
G+K DP G +I
Sbjct: 429 GKKTDPQGHYI 439
>gi|194878837|ref|XP_001974136.1| GG21562 [Drosophila erecta]
gi|190657323|gb|EDV54536.1| GG21562 [Drosophila erecta]
Length = 540
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/311 (51%), Positives = 210/311 (67%), Gaps = 8/311 (2%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL 63
+E + ++ + +I KN GK P+TY +F IV ++ P AP ++ TTP
Sbjct: 132 KVETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKLPKVLGAPEK---LQNITTPP 188
Query: 64 RDDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPK 119
D+ +++ Y PT+E+L E L P + GGETEA+RR+E L+ + WVA F +P
Sbjct: 189 NDEVEQEDSAAYDCPTMEQLVKRPEELGPNKFPGGETEALRRMEDSLKDELWVARFEKPN 248
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYC 178
P SL S T LSP+L+FGCLS RLF L ++ KR K + PP+SL GQL+WREF+Y
Sbjct: 249 TAPNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYT 308
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
A PNFDRM+GN C+QIPW + L W + +TG+P+IDAIM QLR+EGWIHHLAR
Sbjct: 309 VAAAEPNFDRMMGNVYCMQIPWQEHPNHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLAR 368
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
HAVACFLTRGDLW+SWEEG ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV F
Sbjct: 369 HAVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAF 428
Query: 299 GRKADPNGDFI 309
G+K DP G +I
Sbjct: 429 GKKTDPQGHYI 439
>gi|211939158|pdb|3CVU|A Chain A, Drosophila Melanogaster (6-4) Photolyase Bound To Ds Dna
With A T-T (6-4) Photolesion
gi|211939161|pdb|3CVY|A Chain A, Drosophila Melanogaster (6-4) Photolyase Bound To Repaired
Ds Dna
gi|225697970|pdb|2WB2|A Chain A, Drosophila Melanogaster (6-4) Photolyase Bound To Double
Stranded Dna Containing A T(6-4)c Photolesion
gi|240104285|pdb|3CVV|A Chain A, Drosophila Melanogaster (6-4) Photolyase Bound To Ds Dna
With A T-T (6-4) Photolesion And F0 Cofactor
gi|289526487|pdb|2WQ6|A Chain A, Structure Of The 6-4 Photolyase Of D. Melanogaster In
Complex With The Non-Natural N4-Methyl T(Dewar)c Lesion
gi|289526490|pdb|2WQ7|A Chain A, Structure Of The 6-4 Photolyase Of D. Melanogaster In
Complex With The Non-Natural N4-Methyl T(6-4)c Lesion
Length = 543
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 210/310 (67%), Gaps = 8/310 (2%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+E + ++ + +I KN GK P+TY +F IV ++ P P ++ TP +
Sbjct: 156 VETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKVPKVLGVPEK---LKNMPTPPK 212
Query: 65 DDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
D+ ++K Y PT+++L E L P + GGETEA+RR+E L+ + WVA F +P
Sbjct: 213 DEVEQKDSAAYDCPTMKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIWVARFEKPNT 272
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCA 179
P SL S T LSP+L+FGCLS RLF L ++ KR K + PP+SL GQL+WREF+Y
Sbjct: 273 APNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYTV 332
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
A PNFDRMLGN C+QIPW + + L W + +TG+P+IDAIM QLR+EGWIHHLARH
Sbjct: 333 AAAEPNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARH 392
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
AVACFLTRGDLW+SWEEG ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV FG
Sbjct: 393 AVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFG 452
Query: 300 RKADPNGDFI 309
+K DP G +I
Sbjct: 453 KKTDPQGHYI 462
>gi|19528415|gb|AAL90322.1| RE11660p [Drosophila melanogaster]
Length = 540
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 210/310 (67%), Gaps = 8/310 (2%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+E + ++ + +I KN GK P+TY +F IV ++ P P ++ TP +
Sbjct: 133 VETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKVPKVLGVPEK---LKNMPTPPK 189
Query: 65 DDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
D+ ++K Y PT+++L E L P + GGETEA+RR+E L+ + WVA F +P
Sbjct: 190 DEVEQKDSAAYDCPTMKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIWVARFEKPNT 249
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCA 179
P SL S T LSP+L+FGCLS RLF L ++ KR K + PP+SL GQL+WREF+Y
Sbjct: 250 APNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYTV 309
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
A PNFDRMLGN C+QIPW + + L W + +TG+P+IDAIM QLR+EGWIHHLARH
Sbjct: 310 AAAEPNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARH 369
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
AVACFLTRGDLW+SWEEG ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV FG
Sbjct: 370 AVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFG 429
Query: 300 RKADPNGDFI 309
+K DP G +I
Sbjct: 430 KKTDPQGHYI 439
>gi|17137248|ref|NP_477188.1| (6-4)-photolyase, isoform B [Drosophila melanogaster]
gi|24585455|ref|NP_724274.1| (6-4)-photolyase, isoform A [Drosophila melanogaster]
gi|442628599|ref|NP_001260632.1| (6-4)-photolyase, isoform C [Drosophila melanogaster]
gi|442628601|ref|NP_001260633.1| (6-4)-photolyase, isoform D [Drosophila melanogaster]
gi|7298691|gb|AAF53904.1| (6-4)-photolyase, isoform B [Drosophila melanogaster]
gi|22946921|gb|AAN11080.1| (6-4)-photolyase, isoform A [Drosophila melanogaster]
gi|201065459|gb|ACH92139.1| FI01404p [Drosophila melanogaster]
gi|440213996|gb|AGB93167.1| (6-4)-photolyase, isoform C [Drosophila melanogaster]
gi|440213997|gb|AGB93168.1| (6-4)-photolyase, isoform D [Drosophila melanogaster]
Length = 540
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 210/310 (67%), Gaps = 8/310 (2%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+E + ++ + +I KN GK P+TY +F IV ++ P P ++ TP +
Sbjct: 133 VETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKVPKVLGVPEK---LKNMPTPPK 189
Query: 65 DDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
D+ ++K Y PT+++L E L P + GGETEA+RR+E L+ + WVA F +P
Sbjct: 190 DEVEQKDSAAYDCPTMKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIWVARFEKPNT 249
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCA 179
P SL S T LSP+L+FGCLS RLF L ++ KR K + PP+SL GQL+WREF+Y
Sbjct: 250 APNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYTV 309
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
A PNFDRMLGN C+QIPW + + L W + +TG+P+IDAIM QLR+EGWIHHLARH
Sbjct: 310 AAAEPNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARH 369
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
AVACFLTRGDLW+SWEEG ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV FG
Sbjct: 370 AVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFG 429
Query: 300 RKADPNGDFI 309
+K DP G +I
Sbjct: 430 KKTDPQGHYI 439
>gi|194380702|dbj|BAG58504.1| unnamed protein product [Homo sapiens]
Length = 336
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 151/191 (79%), Positives = 168/191 (87%), Gaps = 1/191 (0%)
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYC 178
M SLLAS TGLSP+LRFGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY
Sbjct: 1 MNANSLLASPTGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYT 60
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
AAT NP FDRM GNPIC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLAR
Sbjct: 61 AATNNPRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLAR 120
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
HAVACFLTRGDLWVSWE G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV F
Sbjct: 121 HAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGF 180
Query: 299 GRKADPNGDFI 309
GR+ DP+GD+I
Sbjct: 181 GRRTDPSGDYI 191
>gi|195030094|ref|XP_001987903.1| GH10854 [Drosophila grimshawi]
gi|193903903|gb|EDW02770.1| GH10854 [Drosophila grimshawi]
Length = 538
Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/292 (54%), Positives = 199/292 (68%), Gaps = 6/292 (2%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEE 78
+I +N GK P+TY +F IV K+ P P + PL D + Y PTLE+
Sbjct: 147 VIVRNLGKPPITYQKFLGIVEKLKLPKVLNKPKK---LPDGMQPLADS--DIYDYPTLEQ 201
Query: 79 LGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
L E L + GGE+EA+RR+E L + WVA F +PK P SL S T LSP+L+F
Sbjct: 202 LVKRPEDLGINKFPGGESEALRRMEASLADEQWVAKFEKPKTAPNSLEPSTTVLSPYLKF 261
Query: 139 GCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
GCLS RLF+ L ++ R K + PP+SL GQLLWREF+Y A PNFDRMLGN C+Q
Sbjct: 262 GCLSARLFHERLQEILARQPKHSKPPVSLVGQLLWREFYYTVAAAEPNFDRMLGNAYCLQ 321
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
IPW E L WA+ +TG+P+IDAIM QLR+EGWIHHLARHAVACFLTRGDLW+SWEEG
Sbjct: 322 IPWQEQPEHLEAWAHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEG 381
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV FG+K DP GD+I
Sbjct: 382 QRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPKGDYI 433
>gi|195433475|ref|XP_002064736.1| GK15094 [Drosophila willistoni]
gi|194160821|gb|EDW75722.1| GK15094 [Drosophila willistoni]
Length = 546
Score = 326 bits (836), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 158/313 (50%), Positives = 207/313 (66%), Gaps = 12/313 (3%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKM------DSPSPAEAPVTPLLVR 57
+E + ++ + +I KN GK P+TY +F ++V K+ D P +A P
Sbjct: 133 KVETHCSHTIYNPELVIAKNLGKAPITYQKFLALVEKLKLAKVLDKPEKLDALTQP---- 188
Query: 58 QATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR 117
+ L ++D+ Y P+ E+L L P + GGETE +RR+E L + WVA F +
Sbjct: 189 -SRDELEQENDKVYDCPSQEQLVKKPNELGPNIFPGGETEGLRRMEDSLNDELWVARFEK 247
Query: 118 PKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNK-LYKRIKKAPPPLSLHGQLLWREFF 176
P P SL S T LSP+L+FGCLS+RLFY L + L K K + PP+SL GQ+LWREF+
Sbjct: 248 PNTAPNSLEPSTTVLSPYLKFGCLSSRLFYQRLKEILAKHPKHSQPPVSLVGQVLWREFY 307
Query: 177 YCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHL 236
Y A PNFDRMLGN C+QIPW + E L W +TG+P+IDAIM QLR+EGWIHHL
Sbjct: 308 YTVAAAEPNFDRMLGNVYCLQIPWQEHPEHLEAWTYGRTGYPFIDAIMRQLRQEGWIHHL 367
Query: 237 ARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV 296
ARHAVACFLTRGDLW+SWEEG ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV
Sbjct: 368 ARHAVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPV 427
Query: 297 KFGRKADPNGDFI 309
FG+K DP G++I
Sbjct: 428 AFGKKTDPQGNYI 440
>gi|1304062|dbj|BAA12067.1| photolyase [Drosophila melanogaster]
Length = 540
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 210/310 (67%), Gaps = 8/310 (2%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+E + ++ + + KN GK P+TY +F IV ++ P P +++ TP +
Sbjct: 133 VETHCSHTIYNPELVKAKNLGKAPITYQKFLGIVEQLKVPKVLGVPEK---LKKMPTPPK 189
Query: 65 DDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
D+ ++K Y PT+++L E L P + GGETEA+RR+E L+ + WVA F +P
Sbjct: 190 DEVEQKDSAAYDCPTIKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIWVARFEKPNT 249
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCA 179
P SL S T LSP+L+FGCLS RLF L ++ KR K + PP+SL GQL+WREF+Y
Sbjct: 250 APNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYTV 309
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
A PNFDRMLGN C+QIPW + + L W + +TG+P+IDAIM QLR+EGWIHHLARH
Sbjct: 310 AAAEPNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARH 369
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
AVACFLTRGDLW+SWEEG ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV FG
Sbjct: 370 AVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFG 429
Query: 300 RKADPNGDFI 309
+K DP G +I
Sbjct: 430 KKTDPQGHYI 439
>gi|261278633|pdb|3CVW|A Chain A, Drosophila Melanogaster (6-4) Photolyase H365n Mutant
Bound To Ds Dna With A T-T (6-4) Photolesion And
Cofactor F0
Length = 543
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 210/310 (67%), Gaps = 8/310 (2%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+E + ++ + +I KN GK P+TY +F IV ++ P P ++ TP +
Sbjct: 156 VETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKVPKVLGVPEK---LKNMPTPPK 212
Query: 65 DDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
D+ ++K Y PT+++L E L P + GGETEA+RR+E L+ + WVA F +P
Sbjct: 213 DEVEQKDSAAYDCPTMKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIWVARFEKPNT 272
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCA 179
P SL S T LSP+L+FGCLS RLF L ++ KR K + PP+SL GQL+WREF+Y
Sbjct: 273 APNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYTV 332
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
A PNFDRMLGN C+QIPW + + L W + +TG+P+IDAIM QLR+EGWIH+LARH
Sbjct: 333 AAAEPNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHNLARH 392
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
AVACFLTRGDLW+SWEEG ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV FG
Sbjct: 393 AVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFG 452
Query: 300 RKADPNGDFI 309
+K DP G +I
Sbjct: 453 KKTDPQGHYI 462
>gi|261278636|pdb|3CVX|A Chain A, Drosophila Melanogaster (6-4) Photolyase H369m Mutant
Bound To Ds Dna With A T-T (6-4) Photolesion
Length = 543
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 209/310 (67%), Gaps = 8/310 (2%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+E + ++ + +I KN GK P+TY +F IV ++ P P ++ TP +
Sbjct: 156 VETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKVPKVLGVPEK---LKNMPTPPK 212
Query: 65 DDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
D+ ++K Y PT+++L E L P + GGETEA+RR+E L+ + WVA F +P
Sbjct: 213 DEVEQKDSAAYDCPTMKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIWVARFEKPNT 272
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCA 179
P SL S T LSP+L+FGCLS RLF L ++ KR K + PP+SL GQL+WREF+Y
Sbjct: 273 APNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYTV 332
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
A PNFDRMLGN C+QIPW + + L W + +TG+P+IDAIM QLR+EGWIHHLAR
Sbjct: 333 AAAEPNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARM 392
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
AVACFLTRGDLW+SWEEG ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV FG
Sbjct: 393 AVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFG 452
Query: 300 RKADPNGDFI 309
+K DP G +I
Sbjct: 453 KKTDPQGHYI 462
>gi|242060916|ref|XP_002451747.1| hypothetical protein SORBIDRAFT_04g007140 [Sorghum bicolor]
gi|241931578|gb|EES04723.1| hypothetical protein SORBIDRAFT_04g007140 [Sorghum bicolor]
Length = 550
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/295 (53%), Positives = 201/295 (68%), Gaps = 12/295 (4%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD-EKYGVPTLE 77
II+KNGG+ PLTY F SI + P E P PL D + E VPT+E
Sbjct: 160 IIKKNGGRPPLTYQSFVSIAGEPPDPIMEEYSELP--------PLGDTGEYELLPVPTVE 211
Query: 78 ELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSPF 135
ELG+ DI P ++GGETEA+RR++ L+ K WVA F +PK P + L S T LSP+
Sbjct: 212 ELGYVDISEEEIPPFRGGETEALRRMKESLQNKEWVAKFEKPKGDPSAFLKPSTTVLSPY 271
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
L+FGCLS+R FYH + +YK ++ PP+SL GQLLWR+FFY + PNFDRM GN I
Sbjct: 272 LKFGCLSSRYFYHCIQDVYKSVRNHTKPPVSLIGQLLWRDFFYTVSYGTPNFDRMKGNKI 331
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
C QIPW N E W + QTG+PWIDAIM QLR+ GW+HHLARH+VACFLTRGD+++ W
Sbjct: 332 CKQIPWSENEELFVAWRDGQTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDMFIHW 391
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
E+G +F+ LL+D+DW++N G WMWLSCSSFF Q+ Y P+ FG+K DPNG++I
Sbjct: 392 EKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYHRIYSPITFGKKYDPNGNYI 446
>gi|195119085|ref|XP_002004062.1| GI19664 [Drosophila mojavensis]
gi|193914637|gb|EDW13504.1| GI19664 [Drosophila mojavensis]
Length = 532
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/293 (53%), Positives = 200/293 (68%), Gaps = 2/293 (0%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVT-PLLVRQATTPLRDDHDEKYGVPTLE 77
+I KN G+ P+TY +F S+V K+ P + P P V+ L + Y PTL+
Sbjct: 147 VIAKNFGRAPITYQKFLSVVEKLKLPKVLDKPQRLPNGVQPIADELEMGQSDVYECPTLD 206
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
+L + L + GGE EA+RRL+ L + WVASF +P P SL S T LSP+L+
Sbjct: 207 QLVKRPQELGINKFPGGEREALRRLDTSLSDEHWVASFEKPNTAPNSLEPSTTVLSPYLK 266
Query: 138 FGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RL + L+++ KR K + PP+SL GQLLWREF+Y AA PNFDRMLGN C+
Sbjct: 267 FGCLSARLVHQRLHEILKRHPKHSKPPVSLVGQLLWREFYYTAAAVEPNFDRMLGNVYCL 326
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPW + L WA+ +TG+P+IDAIM QLR+EGWIHHLARHAVACFLTRGDLW+SWEE
Sbjct: 327 QIPWQERPDHLDAWAHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEE 386
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G ++F+ELLLD DW++NAG WMWLS S+FF Q+F Y PV FG+K D G +I
Sbjct: 387 GQRVFEELLLDHDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDRTGAYI 439
>gi|413936069|gb|AFW70620.1| hypothetical protein ZEAMMB73_082662 [Zea mays]
Length = 548
Score = 317 bits (811), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 156/315 (49%), Positives = 210/315 (66%), Gaps = 14/315 (4%)
Query: 1 MSSSIE--KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQ 58
++S IE ++ +L II+KNGG+ PLTY F SI + +P+ E P
Sbjct: 139 LASGIEVLTPVSHTLFDPEEIIKKNGGRPPLTYQSFVSIAGEPPAPAMEEYSELP----- 193
Query: 59 ATTPLRDDHD-EKYGVPTLEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFG 116
PL D + E VPT+EELG+ DI P + GGETEA+RR++ L+ K WVA F
Sbjct: 194 ---PLGDTGEYELLPVPTVEELGYGDISQEEIPPFHGGETEALRRMKESLQNKEWVAKFE 250
Query: 117 RPKMTPQSLLA-SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWRE 174
+PK P + + S T LSP+L+FGCLS+R FYH + +++ ++ PP+SL GQLLWR+
Sbjct: 251 KPKGDPSAFVKPSTTVLSPYLKFGCLSSRYFYHCIQDVHRSVRNHTKPPVSLTGQLLWRD 310
Query: 175 FFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIH 234
FFY + PNFDRM GN IC QIPW N + W + QTG+PWIDAIM QLR GW+H
Sbjct: 311 FFYTVSYGTPNFDRMKGNKICKQIPWSENEDLFVAWRDGQTGYPWIDAIMIQLRNWGWMH 370
Query: 235 HLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYC 294
HLARH+VACFLTRGD+++ WE+G +F+ LL+D+DW++N G W+WLSCSSFF Q+ Y
Sbjct: 371 HLARHSVACFLTRGDMFIHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYHRIYS 430
Query: 295 PVKFGRKADPNGDFI 309
P+ FG+K DPNG++I
Sbjct: 431 PITFGKKYDPNGNYI 445
>gi|195387030|ref|XP_002052207.1| GJ17431 [Drosophila virilis]
gi|194148664|gb|EDW64362.1| GJ17431 [Drosophila virilis]
Length = 541
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/296 (51%), Positives = 200/296 (67%), Gaps = 8/296 (2%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEK----YGVP 74
+I KN GK P+TY +F IV K+ P + P + P+ D+ + Y P
Sbjct: 147 VIAKNLGKAPVTYQKFLGIVDKLKLP---KVLAVPEGLPDGIKPIADEFEAVDSCVYDCP 203
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
TL++L + L + GGETEA+RR+E L + WVA+F +P P SL S T LSP
Sbjct: 204 TLDQLVKRPQELGVNKFPGGETEALRRMEASLIDENWVAAFEKPNTAPNSLEPSTTVLSP 263
Query: 135 FLRFGCLSTRLFYHDLNK-LYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+L+FGCLS RL + L + L ++ K + PP+SL GQLLWREF+Y A +PNFDRMLGN
Sbjct: 264 YLKFGCLSARLLHERLKEILVRKPKHSKPPVSLVGQLLWREFYYTVAAADPNFDRMLGNA 323
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
C+QIPW + L W + +TG+P+IDAIM QLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 324 YCLQIPWQKQPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWIS 383
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE+G ++F++LLLD DW++NAG WMWLS S+FF Q+F Y PV FG+K DP G +I
Sbjct: 384 WEDGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPTGAYI 439
>gi|148905938|gb|ABR16130.1| unknown [Picea sitchensis]
Length = 431
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 149/304 (49%), Positives = 206/304 (67%), Gaps = 11/304 (3%)
Query: 9 LTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD 68
++ ++ S II+KNGGK PLTY F ++ P +P P P+ D+
Sbjct: 30 ISHTIFSPEEIIKKNGGKPPLTYQSFIKLIGLPPLPLGNGSPSIP--------PVGIDNS 81
Query: 69 EKYGVPTLEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+PTL +LGF D+ + GGETEA++R++ ++ + WVA+F +PK P + L
Sbjct: 82 NDLPIPTLTDLGFGDVSQEECNPFIGGETEALKRMDASIQDQKWVAAFEKPKGDPTAFLK 141
Query: 128 -SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPN 185
+ T LSP+L+FGCLS+RLFY L ++Y+++KK PP+SL GQLLWREFFY A P
Sbjct: 142 PATTVLSPYLKFGCLSSRLFYQRLQEVYRKVKKHTEPPVSLEGQLLWREFFYTVAYGTPK 201
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
FD+M GNPIC QIPW+ + L+ W + QTG+PWIDA+M QLR+ GW+HHLARHAVACFL
Sbjct: 202 FDQMEGNPICKQIPWNDDDSLLSAWRDGQTGYPWIDAVMVQLRKWGWMHHLARHAVACFL 261
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
TRGDL+V WE+G +FD LL+D+DW++N WMWLSCS+FF Q+ Y P+ FG+K DP+
Sbjct: 262 TRGDLFVHWEKGRDVFDRLLIDSDWAINNSNWMWLSCSAFFSQYHRIYSPISFGKKYDPD 321
Query: 306 GDFI 309
G ++
Sbjct: 322 GKYV 325
>gi|326513908|dbj|BAJ92104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 546
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/295 (51%), Positives = 196/295 (66%), Gaps = 12/295 (4%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD-EKYGVPTLE 77
IIEKNGG+ PLTY F + + P E V P P+ D E VP LE
Sbjct: 159 IIEKNGGRPPLTYQSFVATAGEPPKPVMEEYSVLP--------PIGDTGGYELLPVPKLE 210
Query: 78 ELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSPF 135
ELG+ D+ P ++GGETEA++R+ L+ K WVA F +PK P + + + T LSP+
Sbjct: 211 ELGYGDLSQEYIPPFRGGETEALKRMRESLQDKEWVAKFEKPKGDPSAFVKPATTVLSPY 270
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
L+FGCLS R FYH + +Y+ K PP+SL GQLLWR+FFY + PNFD M GNPI
Sbjct: 271 LKFGCLSVRYFYHCIQDVYRSAKTHTKPPVSLAGQLLWRDFFYTVSLGTPNFDHMEGNPI 330
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
C QIPW + E W + +TG+PWIDAIM QLR+ GW+HHLARH+VACFLTRGDL++ W
Sbjct: 331 CKQIPWRESEELFVAWRDGRTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLYIHW 390
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
E+G +F+ LL+D+DW++N G W+WLSCSSFF Q+ Y P+ FG+K DPNGD+I
Sbjct: 391 EQGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYHRIYSPISFGKKYDPNGDYI 445
>gi|133754344|gb|ABO38436.1| (6-4) photolyase [Danaus plexippus]
Length = 501
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 204/311 (65%), Gaps = 16/311 (5%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+ K++ ++ +++KN G PLTY +F S+V+ + + Q + +
Sbjct: 128 VVKRMQHTVYDFNSVVKKNNGSIPLTYQKFLSLVSDVQVKD----------IIQISKGVS 177
Query: 65 D-----DHDEK-YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRP 118
D D+D + Y +P+LEE G + L + GGE+E ++RL+ ++ +K WV +F +P
Sbjct: 178 DECKASDYDSQGYDIPSLEEFGVNESELSECKYPGGESEGLKRLDVYMAKKQWVCNFEKP 237
Query: 119 KMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYC 178
K +P S+ S T LSP++ GCLS +LFYH L ++ K PP+SL GQL+WREF+Y
Sbjct: 238 KSSPNSIEPSTTVLSPYISHGCLSAKLFYHKLKQVENGSKHTLPPVSLMGQLMWREFYYT 297
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
A + NFD+M+GN +C QIPW N L WA +TG+P++DAIM QL++EGWIHHLAR
Sbjct: 298 AGSGTENFDKMVGNSVCTQIPWKKNDAHLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 357
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
H VACFLTRGDLW+SWEEG K+F++ LLD DWS+NAG WMWLS S+FF +++ Y PV F
Sbjct: 358 HMVACFLTRGDLWISWEEGAKVFEDFLLDYDWSLNAGNWMWLSASAFFYKYYRVYSPVAF 417
Query: 299 GRKADPNGDFI 309
G+K D +G +I
Sbjct: 418 GKKTDKDGLYI 428
>gi|449491122|ref|XP_004158807.1| PREDICTED: (6-4)DNA photolyase-like [Cucumis sativus]
Length = 544
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 156/297 (52%), Positives = 204/297 (68%), Gaps = 13/297 (4%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDD-HDEKYGVPTLE 77
II+KNGG PL+Y F + + PS A AP++ + + P+ D E VPT++
Sbjct: 149 IIQKNGGSPPLSYQSFLKLAGE---PSWACAPLSTTV--SSLPPVGDTGRSEISDVPTIK 203
Query: 78 ELGFDIEGLLPPTW---KGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLS 133
+LG+ E + W +GGETEA++RL+ + K WVA F +PK P + L + T LS
Sbjct: 204 DLGY--EDMAKDDWTPFRGGETEALKRLKESMSNKDWVAKFEKPKGDPSAFLKPATTVLS 261
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIK-KAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGN 192
P+L+FGCLS+R FY + ++YK +K PP+SL GQLLWREFFY AA PNFDRM N
Sbjct: 262 PYLKFGCLSSRYFYQCIQEIYKNVKGHTSPPVSLVGQLLWREFFYTAAFGTPNFDRMKDN 321
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
IC QIPW+ + E LA W +A+TGFPWIDAIM QLR+ GW+HHLARH VACFLTRGDL+V
Sbjct: 322 KICKQIPWNDDNELLAAWRDARTGFPWIDAIMVQLRKWGWMHHLARHCVACFLTRGDLFV 381
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE+G +F+ LL+D+DW++N W+WLSCSSFF Q+ Y P+ FG+K DPNGDFI
Sbjct: 382 HWEKGRDVFERLLIDSDWAINNANWLWLSCSSFFYQYNRVYSPITFGKKYDPNGDFI 438
>gi|224073768|ref|XP_002304163.1| predicted protein [Populus trichocarpa]
gi|222841595|gb|EEE79142.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 155/296 (52%), Positives = 207/296 (69%), Gaps = 12/296 (4%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD--EKYGVPTL 76
II++NGGK PLTY F + + PS A +PLL ++ P D E VPT+
Sbjct: 150 IIQRNGGKPPLTYQSFLKLAGQ---PSWAS---SPLLTSISSLPPVGDVGSCEISEVPTI 203
Query: 77 EELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSP 134
++LG+ DIE P ++GGE+EA++RL+ + K WVA+F +PK P + + + T LSP
Sbjct: 204 KDLGYGDIEQEWIP-FRGGESEALKRLKESISDKEWVANFEKPKGNPSAFVKPATTVLSP 262
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+L+FGCLS+R FY L +YK ++K PP+SL GQLLWR+FFY A PNFDRM GN
Sbjct: 263 YLKFGCLSSRYFYQCLQDVYKNVQKHTSPPVSLAGQLLWRDFFYTVAFGTPNFDRMEGNK 322
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+C QIPW+ + E LA W A+TG+PWIDAIM QLR+ GW+HHLARH+VACFLTRGDL++
Sbjct: 323 LCKQIPWNDDDELLAAWREARTGYPWIDAIMVQLRKWGWMHHLARHSVACFLTRGDLFLH 382
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE G +F+ LL+D+DW++N G W+WLSCSSFF Q+ Y P+ FG+K DPNGD+I
Sbjct: 383 WERGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPNGDYI 438
>gi|357624446|gb|EHJ75225.1| (6-4) photolyase [Danaus plexippus]
Length = 370
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 141/297 (47%), Positives = 198/297 (66%), Gaps = 16/297 (5%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRD-----DHDEK-YG 72
+++KN G PLTY +F S+V+ + + Q + + D D+D + Y
Sbjct: 11 VVKKNNGSIPLTYQKFLSLVSDVQVKD----------IIQISKGVSDECKASDYDSQGYD 60
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+P+LEE G + L + GGE+E ++RL+ ++ +K WV +F +PK +P S+ S T L
Sbjct: 61 IPSLEEFGVNESELSECKYPGGESEGLKRLDVYMAKKQWVCNFEKPKSSPNSIEPSTTVL 120
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGN 192
SP++ GCLS +LFYH L ++ K PP+SL GQL+WREF+Y A + NFD+M+GN
Sbjct: 121 SPYISHGCLSAKLFYHKLKQVENGSKHTLPPVSLMGQLMWREFYYTAGSGTENFDKMVGN 180
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+C QIPW N L WA +TG+P++DAIM QL++EGWIHHLARH VACFLTRGDLW+
Sbjct: 181 SVCTQIPWKKNDAHLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGDLWI 240
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
SWEEG K+F++ LLD DWS+NAG WMWLS S+FF +++ Y PV FG+K D +G +I
Sbjct: 241 SWEEGAKVFEDFLLDYDWSLNAGNWMWLSASAFFYKYYRVYSPVAFGKKTDKDGLYI 297
>gi|222622395|gb|EEE56527.1| hypothetical protein OsJ_05816 [Oryza sativa Japonica Group]
Length = 551
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/296 (51%), Positives = 196/296 (66%), Gaps = 14/296 (4%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEK--YGVPTL 76
IIEKNGG+ P+TY F +I + P P++ + P D E VP +
Sbjct: 163 IIEKNGGRPPMTYQSFVAIAGE---------PPEPIMEEYSELPPVGDTGEYELLPVPRV 213
Query: 77 EELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSP 134
EELG+ DI ++GGETEA++R+ L K WVA F +PK P + L + T LSP
Sbjct: 214 EELGYGDISQEDLSLFRGGETEALKRMRESLHDKEWVAKFEKPKGDPSAFLKPATTVLSP 273
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+L+FGCLS+R FYH + +Y+ KK PP+SL GQLLWR+FFY A PNFD+M GN
Sbjct: 274 YLKFGCLSSRYFYHCIQDIYRSTKKHTNPPVSLTGQLLWRDFFYTVAFGTPNFDQMKGNK 333
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
IC QIPW N E W + +TG+PWIDAIM QLR+ GW+HHLARH+VACFLTRGDL++
Sbjct: 334 ICKQIPWTENEELFPAWRDGRTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFIH 393
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE+G +F+ LL+D+DW++N G WMWLSCSSFF Q+ Y P FG+K DPNG++I
Sbjct: 394 WEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYHRIYSPTSFGKKYDPNGNYI 449
>gi|297598791|ref|NP_001046243.2| Os02g0204400 [Oryza sativa Japonica Group]
gi|306756329|sp|Q0E2Y1.1|UVR3_ORYSJ RecName: Full=(6-4)DNA photolyase
gi|255670698|dbj|BAF08157.2| Os02g0204400 [Oryza sativa Japonica Group]
Length = 551
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/296 (51%), Positives = 196/296 (66%), Gaps = 14/296 (4%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEK--YGVPTL 76
IIEKNGG+ P+TY F +I + P P++ + P D E VP +
Sbjct: 163 IIEKNGGRPPMTYQSFVAIAGE---------PPEPIMEEYSELPPVGDTGEYELLPVPRV 213
Query: 77 EELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSP 134
EELG+ DI ++GGETEA++R+ L K WVA F +PK P + L + T LSP
Sbjct: 214 EELGYGDISQEDLSLFRGGETEALKRMRESLHDKEWVAKFEKPKGDPSAFLKPATTVLSP 273
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+L+FGCLS+R FYH + +Y+ KK PP+SL GQLLWR+FFY A PNFD+M GN
Sbjct: 274 YLKFGCLSSRYFYHCIQDIYRSTKKHTNPPVSLTGQLLWRDFFYTVAFGTPNFDQMKGNK 333
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
IC QIPW N E W + +TG+PWIDAIM QLR+ GW+HHLARH+VACFLTRGDL++
Sbjct: 334 ICKQIPWTENEELFPAWRDGRTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFIH 393
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE+G +F+ LL+D+DW++N G WMWLSCSSFF Q+ Y P FG+K DPNG++I
Sbjct: 394 WEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYHRIYSPTSFGKKYDPNGNYI 449
>gi|218190281|gb|EEC72708.1| hypothetical protein OsI_06300 [Oryza sativa Indica Group]
Length = 551
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/298 (51%), Positives = 199/298 (66%), Gaps = 18/298 (6%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEK--YGVPTL 76
IIEKNGG+ P+TY F +I + P P++ + P D E VP +
Sbjct: 163 IIEKNGGRPPMTYQSFVAIAGE---------PPEPIMEEYSELPPVGDTGEYELLPVPRV 213
Query: 77 EELGF-DI--EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGL 132
EELG+ DI E L P ++GGETEA++R+ L K WVA F +PK P + L + T L
Sbjct: 214 EELGYGDISQEDLSP--FRGGETEALKRMRESLHDKEWVAKFEKPKGDPSAFLKPATTVL 271
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
SP+L+FGCLS+R FYH + +Y+ KK PP+SL GQLLWR+FFY A PNFD+M G
Sbjct: 272 SPYLKFGCLSSRYFYHCIQDVYRSTKKHTNPPVSLTGQLLWRDFFYTVAFGTPNFDQMKG 331
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
N IC QIPW N E W + +TG+PWIDAIM QLR+ GW+HHLARH+VACFLTRGDL+
Sbjct: 332 NKICKQIPWTENEELFPAWRDGRTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLF 391
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ WE+G +F+ LL+D+DW++N G WMWLSCSSFF Q+ Y P FG+K DPNG++I
Sbjct: 392 IHWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYHRIYSPTSFGKKYDPNGNYI 449
>gi|228312124|pdb|3FY4|A Chain A, (6-4) Photolyase Crystal Structure
gi|228312125|pdb|3FY4|B Chain B, (6-4) Photolyase Crystal Structure
gi|228312126|pdb|3FY4|C Chain C, (6-4) Photolyase Crystal Structure
gi|2804280|dbj|BAA24449.1| 6-4 photolyase [Arabidopsis thaliana]
gi|3929918|dbj|BAA34711.1| 6-4 photolyase [Arabidopsis thaliana]
gi|11994334|dbj|BAB02293.1| 6-4 photolyase [Arabidopsis thaliana]
Length = 537
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 204/295 (69%), Gaps = 9/295 (3%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG-VPTLE 77
IIEKNGGK PL+Y F + + PS A++ + ++ + P+ D + VP+LE
Sbjct: 149 IIEKNGGKPPLSYQSFLKVAGE---PSCAKSEL--VMSYSSLPPIGDIGNLGISEVPSLE 203
Query: 78 ELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSPF 135
ELG+ D E ++GGE+EA++RL + + KAWVA+F +PK P + L + T +SP+
Sbjct: 204 ELGYKDDEQADWTPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPATTVMSPY 263
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
L+FGCLS+R FY L +YK +KK PP+SL GQLLWREFFY A PNFD+M GN I
Sbjct: 264 LKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKMKGNRI 323
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
C QIPW+ + LA W + +TG+PWIDAIM QL + GW+HHLARH VACFLTRGDL++ W
Sbjct: 324 CKQIPWNEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIHW 383
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
E+G +F+ LL+D+DW++N G WMWLSCSSFF QF Y P+ FG+K DP+G +I
Sbjct: 384 EQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQFNRIYSPISFGKKYDPDGKYI 438
>gi|18400841|ref|NP_566520.1| (6-4)DNA photolyase [Arabidopsis thaliana]
gi|306756349|sp|O48652.2|UVR3_ARATH RecName: Full=(6-4)DNA photolyase; AltName: Full=Protein UV repair
defective 3
gi|332642182|gb|AEE75703.1| (6-4)DNA photolyase [Arabidopsis thaliana]
Length = 556
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 204/295 (69%), Gaps = 9/295 (3%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG-VPTLE 77
IIEKNGGK PL+Y F + + PS A++ + ++ + P+ D + VP+LE
Sbjct: 168 IIEKNGGKPPLSYQSFLKVAGE---PSCAKSEL--VMSYSSLPPIGDIGNLGISEVPSLE 222
Query: 78 ELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSPF 135
ELG+ D E ++GGE+EA++RL + + KAWVA+F +PK P + L + T +SP+
Sbjct: 223 ELGYKDDEQADWTPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPATTVMSPY 282
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
L+FGCLS+R FY L +YK +KK PP+SL GQLLWREFFY A PNFD+M GN I
Sbjct: 283 LKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKMKGNRI 342
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
C QIPW+ + LA W + +TG+PWIDAIM QL + GW+HHLARH VACFLTRGDL++ W
Sbjct: 343 CKQIPWNEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIHW 402
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
E+G +F+ LL+D+DW++N G WMWLSCSSFF QF Y P+ FG+K DP+G +I
Sbjct: 403 EQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQFNRIYSPISFGKKYDPDGKYI 457
>gi|357139910|ref|XP_003571518.1| PREDICTED: (6-4)DNA photolyase-like [Brachypodium distachyon]
Length = 547
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 198/296 (66%), Gaps = 14/296 (4%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEK--YGVPTL 76
IIEKNGG+ PLTY F +I + P P++ + PL D E VP L
Sbjct: 160 IIEKNGGRPPLTYQSFLAIAGE---------PPKPVMAEYSELPLIGDTGEYELLPVPKL 210
Query: 77 EELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSP 134
EELG+ DI ++GGETEA++R+ L+ K WV+ F +PK P + L + T LSP
Sbjct: 211 EELGYGDISQENISPFRGGETEALKRMRESLQDKEWVSMFEKPKGDPSAFLKPATTVLSP 270
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+L+FGCLS+R FYH + ++Y+ KK PP+SL GQLLWR+FFY + +FD M GN
Sbjct: 271 YLKFGCLSSRYFYHCIQEVYRSTKKHTKPPVSLTGQLLWRDFFYTVSFGTLSFDHMKGNK 330
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
IC QIPW N E W + +TG+PWIDAIM QLR+ GW+HHLARH+VACFLTRGDL++
Sbjct: 331 ICKQIPWRQNEELFVAWRDGRTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFIH 390
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE+G +F+ LL+D+DW++N G W+WLSCSSFF Q+ Y P+ FG+K DPNGD+I
Sbjct: 391 WEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYHRIYSPISFGKKYDPNGDYI 446
>gi|297743390|emb|CBI36257.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 157/306 (51%), Positives = 207/306 (67%), Gaps = 11/306 (3%)
Query: 9 LTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD 68
++ +L S II+KNGG+ PL+Y F + + PS A +PLL + P D
Sbjct: 139 VSHTLFDSAEIIQKNGGRPPLSYQSFLKLAGQ---PSWAS---SPLLTTLSWLPPVGDVG 192
Query: 69 --EKYGVPTLEELGFDIEGLLPPT-WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSL 125
E VPT++ELG++ G T +KGGE+EA++RL + K WVA+F +PK P +
Sbjct: 193 TCEISNVPTVKELGYEEIGQDESTPFKGGESEALKRLRESIRDKEWVANFEKPKGDPSAF 252
Query: 126 LA-SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK-KAPPPLSLHGQLLWREFFYCAATRN 183
L + T LSP+L+FGCLS+R FY L +YK +K PP+SL GQLLWR+FFY
Sbjct: 253 LKPATTVLSPYLKFGCLSSRYFYQCLTDVYKNMKWHTSPPVSLVGQLLWRDFFYTVGFGT 312
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNFDRM GN IC QIPW+ + E LA W A+TG+PWIDAIM QLR+ GW+HHLARH VAC
Sbjct: 313 PNFDRMKGNRICKQIPWNDDDELLAAWREARTGYPWIDAIMVQLRKWGWMHHLARHCVAC 372
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDL+V WE+G +F+ LL+D+DW++N G W+WLSCSSFF Q+ Y P+ FG+K D
Sbjct: 373 FLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYD 432
Query: 304 PNGDFI 309
PNG++I
Sbjct: 433 PNGNYI 438
>gi|359483005|ref|XP_002285327.2| PREDICTED: (6-4)DNA photolyase [Vitis vinifera]
Length = 564
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 157/306 (51%), Positives = 207/306 (67%), Gaps = 11/306 (3%)
Query: 9 LTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD 68
++ +L S II+KNGG+ PL+Y F + + PS A +PLL + P D
Sbjct: 165 VSHTLFDSAEIIQKNGGRPPLSYQSFLKLAGQ---PSWAS---SPLLTTLSWLPPVGDVG 218
Query: 69 --EKYGVPTLEELGFDIEGLLPPT-WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSL 125
E VPT++ELG++ G T +KGGE+EA++RL + K WVA+F +PK P +
Sbjct: 219 TCEISNVPTVKELGYEEIGQDESTPFKGGESEALKRLRESIRDKEWVANFEKPKGDPSAF 278
Query: 126 LA-SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK-KAPPPLSLHGQLLWREFFYCAATRN 183
L + T LSP+L+FGCLS+R FY L +YK +K PP+SL GQLLWR+FFY
Sbjct: 279 LKPATTVLSPYLKFGCLSSRYFYQCLTDVYKNMKWHTSPPVSLVGQLLWRDFFYTVGFGT 338
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNFDRM GN IC QIPW+ + E LA W A+TG+PWIDAIM QLR+ GW+HHLARH VAC
Sbjct: 339 PNFDRMKGNRICKQIPWNDDDELLAAWREARTGYPWIDAIMVQLRKWGWMHHLARHCVAC 398
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGDL+V WE+G +F+ LL+D+DW++N G W+WLSCSSFF Q+ Y P+ FG+K D
Sbjct: 399 FLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYD 458
Query: 304 PNGDFI 309
PNG++I
Sbjct: 459 PNGNYI 464
>gi|255553063|ref|XP_002517574.1| DNA photolyase, putative [Ricinus communis]
gi|223543206|gb|EEF44738.1| DNA photolyase, putative [Ricinus communis]
Length = 537
Score = 306 bits (784), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 203/295 (68%), Gaps = 9/295 (3%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD-EKYGVPTLE 77
II+KNGGK PL+Y F + + PS A +P+ + + P+ D E VPTLE
Sbjct: 150 IIQKNGGKPPLSYQSFLKVAGQ---PSWASSPLPTTI--SSLPPVGDVGSCEISEVPTLE 204
Query: 78 ELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSPF 135
ELG+ D+E ++GGE+EA++RL + K WVA+F +PK P + + + T LSP+
Sbjct: 205 ELGYGDVEQDEWAPFRGGESEALKRLREKITNKEWVANFEKPKGDPSAFMKPATTVLSPY 264
Query: 136 LRFGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
L+FGCLS+R FY L +YK + K PP+SL GQLLWR+FFY A PNFD+M N I
Sbjct: 265 LKFGCLSSRYFYQCLQDVYKNVGKHTSPPVSLLGQLLWRDFFYTVAFGTPNFDQMKENRI 324
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
C QIPW+ + E L+ W A+TG+PWIDAIM QLR+ GW+HHLARH VACFLTRGDL+V W
Sbjct: 325 CKQIPWNEDDELLSAWREARTGYPWIDAIMVQLRKWGWMHHLARHCVACFLTRGDLFVHW 384
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
E+G +F+ LL+D+DW++N G W+WLSCSSFF Q+ Y P+ FG+K DPNG++I
Sbjct: 385 EKGRNVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPNGNYI 439
>gi|356526185|ref|XP_003531700.1| PREDICTED: (6-4)DNA photolyase-like [Glycine max]
Length = 535
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/298 (52%), Positives = 199/298 (66%), Gaps = 18/298 (6%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRD----DHDEKYGVP 74
IIEKNGGK PL+Y F + E P + V + P+ + D E VP
Sbjct: 149 IIEKNGGKPPLSYQSFVKLAG--------EPPSSLSTVYSSLPPVGNLGSCDISE---VP 197
Query: 75 TLEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGL 132
T+ +LG+ D E +KGGE+EA++RL+ ++ K WVA+F +PK P + L + T L
Sbjct: 198 TIRDLGYGDAEQDEFSPFKGGESEALKRLDECMKDKKWVANFEKPKGNPSAFLKPATTVL 257
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
SP+L+FGCLS R FY + +YK + K PP+SL GQLLWREFFY AA PNFDRM G
Sbjct: 258 SPYLKFGCLSPRYFYQSIQDVYKSMPKHTLPPVSLIGQLLWREFFYTAAFGTPNFDRMKG 317
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
N IC QIPW + + L W A+TGFPWIDAIM QLR+ GW+HHLARH+VACFLTRGDL+
Sbjct: 318 NRICKQIPWKDDDKLLEAWREARTGFPWIDAIMVQLRKWGWMHHLARHSVACFLTRGDLF 377
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
V WE+G +F+ LL+D+DW++N G WMWLSCSSFF Q+ Y P FG+K DPNGD+I
Sbjct: 378 VHWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPTTFGKKYDPNGDYI 435
>gi|384248771|gb|EIE22254.1| UVR3 AtUVR3-like 6-4 DNA photolyase protein [Coccomyxa
subellipsoidea C-169]
Length = 482
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 154/307 (50%), Positives = 195/307 (63%), Gaps = 13/307 (4%)
Query: 9 LTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAE----APVTPLLVRQATTPLR 64
++ +L + ++ KNGGK PLTY F+ + + P A + PL T
Sbjct: 133 VSHTLYDTSDVVAKNGGKAPLTYKGFEKAITALGPPPAPVEDPPAKLPPLAADSKGT--- 189
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
E VP+L ELG+ E KGGETEA+ RL L K WVA+F +PK P +
Sbjct: 190 --DSETTSVPSLRELGYPDEA--STDIKGGETEALARLAEQLSDKGWVAAFEKPKGDPTA 245
Query: 125 LLA-SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATR 182
+ + T LSP L+FGCLS RLFY L ++YK K+ + PP+SL GQLLWREF+Y AA
Sbjct: 246 FIKPATTVLSPHLKFGCLSPRLFYEALQRVYKEKKEHSKPPVSLLGQLLWREFYYVAAAH 305
Query: 183 NPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
PN+ RM GNPIC QIPWD N E W ++TG+PWIDAIM QLR GW+HHLARH VA
Sbjct: 306 TPNYHRMEGNPICKQIPWDNNAEFYRAWEESRTGYPWIDAIMAQLRRTGWMHHLARHCVA 365
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKA 302
CFLTRGDL+VSWE+G FD LL+D D S+N+G WMWLS SSFF Q+F Y P+ +G+K
Sbjct: 366 CFLTRGDLYVSWEKGRDTFDRLLIDGDPSLNSGNWMWLSASSFFYQYFRVYSPITYGKKY 425
Query: 303 DPNGDFI 309
DP G ++
Sbjct: 426 DPEGKYV 432
>gi|46390519|dbj|BAD16007.1| putative 6-4 photolyase (UVR3) [Oryza sativa Japonica Group]
gi|51536259|dbj|BAD38427.1| putative 6-4 photolyase (UVR3) [Oryza sativa Japonica Group]
Length = 560
Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 148/293 (50%), Positives = 193/293 (65%), Gaps = 14/293 (4%)
Query: 22 KNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEK--YGVPTLEEL 79
KNGG+ P+TY F +I + P P++ + P D E VP +EEL
Sbjct: 175 KNGGRPPMTYQSFVAIAGE---------PPEPIMEEYSELPPVGDTGEYELLPVPRVEEL 225
Query: 80 GF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSPFLR 137
G+ DI ++GGETEA++R+ L K WVA F +PK P + L + T LSP+L+
Sbjct: 226 GYGDISQEDLSLFRGGETEALKRMRESLHDKEWVAKFEKPKGDPSAFLKPATTVLSPYLK 285
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS+R FYH + +Y+ KK PP+SL GQLLWR+FFY A PNFD+M GN IC
Sbjct: 286 FGCLSSRYFYHCIQDIYRSTKKHTNPPVSLTGQLLWRDFFYTVAFGTPNFDQMKGNKICK 345
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPW N E W + +TG+PWIDAIM QLR+ GW+HHLARH+VACFLTRGDL++ WE+
Sbjct: 346 QIPWTENEELFPAWRDGRTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFIHWEK 405
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G +F+ LL+D+DW++N G WMWLSCSSFF Q+ Y P FG+K DPNG++I
Sbjct: 406 GRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYHRIYSPTSFGKKYDPNGNYI 458
>gi|449436599|ref|XP_004136080.1| PREDICTED: (6-4)DNA photolyase-like [Cucumis sativus]
Length = 549
Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 155/302 (51%), Positives = 204/302 (67%), Gaps = 18/302 (5%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDD-HDEKYGVPTLE 77
II+KNGG PL+Y F + + PS A AP++ + + P+ D E VPT++
Sbjct: 149 IIQKNGGSPPLSYQSFLKLAGE---PSWACAPLSTTV--SSLPPVGDTGRSEISDVPTIK 203
Query: 78 ELGFDIEGLLPPTW---KGGETEAMRRLERHLE-----RKAWVASFGRPKMTPQSLLA-S 128
+LG+ E + W +GGETEA++RL+ + + WVA F +PK P + L +
Sbjct: 204 DLGY--EDMAKDDWTPFRGGETEALKRLKESMSFLIGSLQDWVAKFEKPKGDPSAFLKPA 261
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIK-KAPPPLSLHGQLLWREFFYCAATRNPNFD 187
T LSP+L+FGCLS+R FY + ++YK +K PP+SL GQLLWREFFY AA PNFD
Sbjct: 262 TTVLSPYLKFGCLSSRYFYQCIQEIYKNVKGHTSPPVSLVGQLLWREFFYTAAFGTPNFD 321
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
RM N IC QIPW+ + E LA W +A+TGFPWIDAIM QLR+ GW+HHLARH VACFLTR
Sbjct: 322 RMKDNKICKQIPWNDDNELLAAWRDARTGFPWIDAIMVQLRKWGWMHHLARHCVACFLTR 381
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
GDL+V WE+G +F+ LL+D+DW++N W+WLSCSSFF Q+ Y P+ FG+K DPNGD
Sbjct: 382 GDLFVHWEKGRDVFERLLIDSDWAINNANWLWLSCSSFFYQYNRVYSPITFGKKYDPNGD 441
Query: 308 FI 309
FI
Sbjct: 442 FI 443
>gi|61816948|gb|AAX56342.1| 6-4 photolyase [Dunaliella salina]
Length = 600
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 201/310 (64%), Gaps = 11/310 (3%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPA-EAPVTPLLVRQATTPL 63
++K + +L + ++ +N GK PLT F+ +V ++ P A AP L + P
Sbjct: 172 VKKHWSHTLYDTDMLVRENKGKAPLTMQAFEKLVDRVGHPLTALPAPTARLPPVDVSLP- 230
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPT--WKGGETEAMRRLERHLERKAWVASFGRPKMT 121
D + GVPT +E+GF PT +KGGETEA++RLE +++ W ASF +P
Sbjct: 231 -GIKDAEVGVPTWQEMGFKEA----PTAIFKGGETEALKRLEHYMKDTKWXASFEKPSTD 285
Query: 122 PQSLLA-SQTGLSPFLRFGCLSTRLFYHDLNKLYK-RIKKAPPPLSLHGQLLWREFFYCA 179
P + S T LSP+L+FGCLS R F+ L +Y+ K + PP+SL GQLLWREFFY
Sbjct: 286 PSAFTEPSTTALSPYLKFGCLSARFFHQRLLDVYRLHPKHSQPPMSLRGQLLWREFFYTL 345
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
+ PNFDR+ GNPIC QI WD N L W + TG+PWIDA MTQLRE GW+HHLARH
Sbjct: 346 GSHTPNFDRIAGNPICRQITWDTNPALLKAWRDGATGYPWIDAAMTQLREWGWMHHLARH 405
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
+VACFLTRGDL++SWE G ++F+ELLLDAD+ +NA WMWLS S+FF Q+F Y PV FG
Sbjct: 406 SVACFLTRGDLYLSWESGKEVFEELLLDADYFINAANWMWLSASAFFAQYFRVYSPVVFG 465
Query: 300 RKADPNGDFI 309
+K D G +I
Sbjct: 466 KKYDKEGAYI 475
>gi|156383457|ref|XP_001632850.1| predicted protein [Nematostella vectensis]
gi|156219912|gb|EDO40787.1| predicted protein [Nematostella vectensis]
Length = 492
Score = 300 bits (768), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 148/299 (49%), Positives = 190/299 (63%), Gaps = 6/299 (2%)
Query: 13 LPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG 72
L + ++E N GK P+T+ + ++ P P V + TP+ DH EKYG
Sbjct: 131 LYDTDEVLETNDGKLPMTFDEMAKTAEQLGPPCPPCQTVDKTVFGACITPVGLDHAEKYG 190
Query: 73 VPTLEELGFDIEGLLPPT--WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
VP L + G G WKGGE EAMRRL L++K F +P ++ +LLAS
Sbjct: 191 VPQLSDFGGKELGRATAKLFWKGGELEAMRRLNLALQKK----KFIKPPLSADTLLASDR 246
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRML 190
LSP++RFGCLS L Y+R + PP +L+ LLWREFF+ A+ NP+ RM+
Sbjct: 247 ALSPYMRFGCLSPCYILDRLTTEYQRTMGSKPPETLYTNLLWREFFFATASTNPDHHRMM 306
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
GNP+ +QIPW+ + EAL+ W +TGFPWIDAIM QLREEGWIHHLAR AV CFLTRG L
Sbjct: 307 GNPLALQIPWEQHPEALSLWKQGKTGFPWIDAIMRQLREEGWIHHLARQAVGCFLTRGCL 366
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WVSWEEG K FDEL LDA+WS+NAG W+WLSCSS+ YCPV+ G++ DP G++I
Sbjct: 367 WVSWEEGFKAFDELQLDAEWSLNAGNWLWLSCSSYVHGAVPWYCPVEVGKQVDPTGEYI 425
>gi|37521318|ref|NP_924695.1| photolyase [Gloeobacter violaceus PCC 7421]
gi|35212315|dbj|BAC89690.1| photolyase [Gloeobacter violaceus PCC 7421]
Length = 490
Score = 300 bits (767), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 150/298 (50%), Positives = 192/298 (64%), Gaps = 17/298 (5%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEE 78
+IE GK P TY F + AK+ P +APV + P + D YG+PTL E
Sbjct: 137 LIELGRGKVPTTYGAFGRLAAKLGEP---DAPVA----SPSHLPPPGELDADYGIPTLAE 189
Query: 79 LGF-DIE----GLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSL-LASQTGL 132
LG+ D E G++PP GGE E +RRL +L + A F +P P + S T L
Sbjct: 190 LGYPDPECPSRGIIPP---GGEGEGLRRLHVYLSDRQRSAGFAKPDTDPTAFDPPSTTAL 246
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
L+FGCLS R FY ++ K+Y+ + + PP+SL GQ+LWREFFY PN+DR+ G
Sbjct: 247 GAHLKFGCLSARTFYAEVQKVYREVGEHTEPPMSLIGQILWREFFYTVGYATPNYDRIEG 306
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
NP+C QIPWD N E LA W+ A+TGFPWIDA MTQLR EGW+HHL+RHAVACFLTRGDLW
Sbjct: 307 NPVCRQIPWDDNPEYLAAWSEARTGFPWIDAAMTQLRTEGWLHHLSRHAVACFLTRGDLW 366
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
VSWE+G +F+ LLLD DWS+NA WMWLS S+FF ++ Y P+ F +K DP G ++
Sbjct: 367 VSWEKGQAVFERLLLDQDWSLNASNWMWLSASAFFNAYYRVYSPISFAKKYDPEGRYV 424
>gi|317106754|dbj|BAJ53248.1| JHL25H03.11 [Jatropha curcas]
Length = 536
Score = 300 bits (767), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 148/295 (50%), Positives = 202/295 (68%), Gaps = 9/295 (3%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD-EKYGVPTLE 77
II+KNGGK PLTY F + + P+ A + + P+ D E VPT+E
Sbjct: 149 IIQKNGGKPPLTYQSFLKVAGE-----PSWASSPLSISISSLPPVGDVGSCEISEVPTVE 203
Query: 78 ELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSPF 135
ELG+ D+E ++GGE+EA++ L ++ K W+A+F +PK P + + + T LSP+
Sbjct: 204 ELGYGDVEQDEWTPFRGGESEALKSLRESIKDKEWIANFEKPKGDPSAFVKPATTVLSPY 263
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
L+FGCLS+R F+ L +Y+ +KK PP+SL GQLLWR+FFY A PNFD+M N I
Sbjct: 264 LKFGCLSSRYFFQCLQDVYRNVKKHTSPPVSLVGQLLWRDFFYTVAFGTPNFDQMKDNRI 323
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
C QIPW+ + E LA W +A+TG+PWIDAIM QLR+ GW+HHLARH VACFLTRGDL+V W
Sbjct: 324 CKQIPWNEDTELLAAWRDARTGYPWIDAIMVQLRKWGWMHHLARHCVACFLTRGDLFVHW 383
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
E+G +F+ LL+D+DW++N G W+WLSCSSFF Q+ Y P+ FG+K DPNG++I
Sbjct: 384 EKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPNGNYI 438
>gi|298708156|emb|CBJ30497.1| cryptochrome 1 [Ectocarpus siliculosus]
Length = 542
Score = 299 bits (766), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 200/300 (66%), Gaps = 6/300 (2%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAP-VTPLLVRQATTPLRDDHDEK 70
+L + ++ K G TY F + P P AP ++ L +P ++D +
Sbjct: 139 NLQNYHMLMGKKQGTYLKTYGAFLKLHDNA-GPVPDCAPDISGDLPAPGASPDDAEYD-R 196
Query: 71 YGVPTLEELGFDIEGLLPP-TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ 129
+ +P+L +LG +E L ++GGE EA+ RLER + R+ W++ F +PK +P S+ S
Sbjct: 197 FSIPSLSDLG--VEPLAKALKFRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPST 254
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
T LS ++ GCLSTR F+H L K+Y + + PP+SL GQLLW+EF Y + P+FD+M
Sbjct: 255 TVLSMYISHGCLSTRRFWHALCKVYTKKGGSKPPVSLKGQLLWKEFNYFSGYSIPSFDKM 314
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
+GNP+ QIPWD + E L W A+TGFPWIDA MTQL++EGWIHHLARHAVACFLTRGD
Sbjct: 315 VGNPVIRQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGD 374
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LW SWE+G +FDELLLDADWS+N W WLSCS+FF Q+F CY P+ FG+K D NGD+I
Sbjct: 375 LWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPIAFGKKTDQNGDYI 434
>gi|168002746|ref|XP_001754074.1| UVR3 AtUVR3-like 6-4 DNA photolyase protein [Physcomitrella patens
subsp. patens]
gi|162694628|gb|EDQ80975.1| UVR3 AtUVR3-like 6-4 DNA photolyase protein [Physcomitrella patens
subsp. patens]
Length = 526
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/306 (50%), Positives = 199/306 (65%), Gaps = 25/306 (8%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD-EKYGVPTLEE 78
I KNGG+TPLTY F + K P P AP+ Q +P D +D VP LE+
Sbjct: 148 IRKNGGQTPLTYQAFLKLTGK--PPLPVTAPL------QIPSPPEDLNDVHVVPVPKLED 199
Query: 79 LGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSPFL 136
LG+ +++ P GGETEA+RRL++ L + WV F +PK P + + + T LSP+L
Sbjct: 200 LGYVNLDEEFSPH-PGGETEALRRLDKSLVNQKWVCDFEKPKGNPTAFIEPATTVLSPYL 258
Query: 137 R------------FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
+ FGCLS RLF+ L +Y + KK + PP+SL GQLLWREFFY A
Sbjct: 259 KASNLGFLLKPMLFGCLSCRLFHQRLLAVYSQNKKHSSPPVSLEGQLLWREFFYTAGYGT 318
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNFDRMLGNPIC QIPW + LA W + QTG+PWIDA M QLR+ GW+HHLARHAVAC
Sbjct: 319 PNFDRMLGNPICKQIPWKDDDRLLAAWRDGQTGYPWIDAAMVQLRKWGWMHHLARHAVAC 378
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLTRGD++V WE+G +FD LL+D+DW++N G W+WLS S+FF Q+ Y PV FG+K D
Sbjct: 379 FLTRGDMFVYWEKGRDVFDRLLIDSDWAINNGNWLWLSASAFFHQYHRIYSPVTFGKKYD 438
Query: 304 PNGDFI 309
P+G ++
Sbjct: 439 PDGLYV 444
>gi|219118654|ref|XP_002180095.1| cryptochrome photolyase family 1 [Phaeodactylum tricornutum CCAP
1055/1]
gi|217408352|gb|EEC48286.1| cryptochrome photolyase family 1 [Phaeodactylum tricornutum CCAP
1055/1]
Length = 550
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/308 (46%), Positives = 195/308 (63%), Gaps = 12/308 (3%)
Query: 14 PSSRRIIEKNGGKTPLTYHQFQSIVAKMD-SPSPAEAPVTPLLVRQATTPLRDDHDEKYG 72
P R + + P TY F I KM + E P L ++ L E
Sbjct: 153 PMERYLAQCKDHTAPSTYGSFTKIFNKMSVAKEVNEVKEVPSLPNKSVKLLEKSFAEALR 212
Query: 73 VPTLEELGF-----DIE--GLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ-S 124
+PTL++LG+ D++ G + GGE A+ L +++ R WVA+F +PK +P +
Sbjct: 213 MPTLKDLGYAAAADDMKNSGKGGYAFAGGENAAIELLAKNMARSQWVATFEKPKTSPNDA 272
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI---KKAPPPLSLHGQLLWREFFYCAAT 181
S T LSP+++ GC+S R FYH+L+K+Y + + + PP+SLHGQL+WR+F Y
Sbjct: 273 TRPSTTALSPYVKHGCISPRRFYHELSKVYSKYNSKETSKPPVSLHGQLMWRDFNYLVGY 332
Query: 182 RNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
PNFD+M+ NPI QIPWD + + L W ++TG+P+IDAIMTQLRE GWIHHLARH+V
Sbjct: 333 STPNFDKMIDNPIARQIPWDDDPDLLLAWKMSKTGYPYIDAIMTQLRETGWIHHLARHSV 392
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRK 301
ACFLTRGDLW SWE+G +F+E L+DADWS+N W WLSC++ F Q+F CY P+ FG+K
Sbjct: 393 ACFLTRGDLWQSWEDGATVFEEYLIDADWSINNFNWQWLSCTAHFYQYFRCYSPIAFGKK 452
Query: 302 ADPNGDFI 309
DPNGD+I
Sbjct: 453 TDPNGDYI 460
>gi|422295899|gb|EKU23198.1| cryptochrome [Nannochloropsis gaditana CCMP526]
Length = 560
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 135/243 (55%), Positives = 170/243 (69%), Gaps = 3/243 (1%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
+ + VP L +G+ E P + GGET A+ R++ HL ++ +F +PK +P +L S
Sbjct: 226 DDFSVPDLSGIGYP-ETDAPTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPS 284
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIK--KAPPPLSLHGQLLWREFFYCAATRNPNF 186
T LSP+L+ G LS+RLFYH L + + K PP+SL GQLLWREFFY PNF
Sbjct: 285 TTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNF 344
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
D+M+GNPIC QIPW N E L W A+TG+P+IDA MTQLREEGWIHHLARHA+ACFLT
Sbjct: 345 DKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLT 404
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDLW SWEEG ++F++ LLDADWSVN G W+WLS S+FF Q+F Y PV FG K D G
Sbjct: 405 RGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEG 464
Query: 307 DFI 309
++I
Sbjct: 465 EYI 467
>gi|302795740|ref|XP_002979633.1| hypothetical protein SELMODRAFT_233387 [Selaginella moellendorffii]
gi|300152881|gb|EFJ19522.1| hypothetical protein SELMODRAFT_233387 [Selaginella moellendorffii]
Length = 527
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/314 (49%), Positives = 198/314 (63%), Gaps = 19/314 (6%)
Query: 6 EKKLTLSLPSSRRI------IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQA 59
+K + L P S I I KNGGK PLT+ F + PA P+ A
Sbjct: 125 DKGIELHCPVSHTIFNPDLLIAKNGGKAPLTFQSFCKNLV------PATKPIGN--GPSA 176
Query: 60 TTPLRDDHDEKY-GVPTLEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR 117
P D H K VPTLEELG+ D P ++GGET A+ RLE L + WV F +
Sbjct: 177 IPPTGDLHGIKVVPVPTLEELGYADFHEDFSP-FRGGETVALTRLEDSLANEKWVCEFEK 235
Query: 118 PKMTPQSLLA-SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREF 175
PK P + + + T LSP+L+FGCLS+RL Y + ++Y R K PP+SL QLLWREF
Sbjct: 236 PKGDPTAFIKPATTVLSPYLKFGCLSSRLVYSRVKEVYSRAKSFTSPPVSLEAQLLWREF 295
Query: 176 FYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHH 235
FY AA NFD+M+GNPIC QIPW + E L+ W + +TG+PWIDA MTQLR+ GW+HH
Sbjct: 296 FYTAAYATANFDKMVGNPICKQIPWKDDDELLSAWRDGRTGYPWIDAAMTQLRKWGWMHH 355
Query: 236 LARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCP 295
LARHAVACFLTRGD++V WE+G +FD LL+DADWS+N G W+WLS S+FF Q+ Y P
Sbjct: 356 LARHAVACFLTRGDMFVYWEKGRDVFDRLLIDADWSINNGNWLWLSASAFFNQYHRIYSP 415
Query: 296 VKFGRKADPNGDFI 309
+ F +K D G++I
Sbjct: 416 ITFAKKYDRQGNYI 429
>gi|307103112|gb|EFN51376.1| hypothetical protein CHLNCDRAFT_7260, partial [Chlorella
variabilis]
Length = 491
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 188/294 (63%), Gaps = 10/294 (3%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEE 78
++++NGG+ PLT F +V + P + A VP+L +
Sbjct: 142 LLQRNGGRAPLTMQSFTKLVDGGGCAAGYRCIAAPSWPQAAALV-----SSSVAVPSLTD 196
Query: 79 LGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL-ASQTGLSPFLR 137
+G+ G P +KGGE+ A+ R+ +L K WV +F +PK P + + S T LSP+L+
Sbjct: 197 IGYPPTGTTP--FKGGESAALARMADYLSDKGWVCAFEKPKGNPAAFVRPSTTVLSPYLK 254
Query: 138 FGCLSTRLFYHDLNKLY--KRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
FGCLS RLF+ L ++Y + PP+SL GQLLWREFF PNFDRM GNPIC
Sbjct: 255 FGCLSPRLFHAKLQQIYAERNGMHTQPPVSLRGQLLWREFFTLCGAAIPNFDRMAGNPIC 314
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
QIPW + E +A W +++TG+PWIDAIM QLR++GW+HHLARH+VACFLTRGDLW SWE
Sbjct: 315 KQIPWVDDPERIAAWEHSRTGYPWIDAIMAQLRQQGWMHHLARHSVACFLTRGDLWCSWE 374
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G +FD+ L+DADWS+NA W WLS S+FF Q+F Y P+ FG++ D NGD+I
Sbjct: 375 AGQAVFDKYLIDADWSLNAANWQWLSASAFFSQYFRVYSPIAFGKQYDKNGDYI 428
>gi|302791750|ref|XP_002977641.1| hypothetical protein SELMODRAFT_417535 [Selaginella moellendorffii]
gi|300154344|gb|EFJ20979.1| hypothetical protein SELMODRAFT_417535 [Selaginella moellendorffii]
Length = 433
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/297 (49%), Positives = 189/297 (63%), Gaps = 17/297 (5%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSP---SPAEAPVTPLLVRQATTPLRDDHDEKYGVPT 75
+I KNGGK PLT+ F + P P+ P T L P VPT
Sbjct: 136 LIAKNGGKAPLTFQSFCKNLVPATKPIGNGPSSIPPTGDLHGIKVVP----------VPT 185
Query: 76 LEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLS 133
LEELG+ D P ++GGET + RLE L + WV F +PK P + + + T LS
Sbjct: 186 LEELGYTDFHEDFSP-FRGGETVGLTRLEDSLANEKWVCEFEKPKGDPTAFIKPATTVLS 244
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGN 192
P+L+FGCLS+RLFY + ++Y R K PP+SL QLLWREFFY AA NFD+M+GN
Sbjct: 245 PYLKFGCLSSRLFYSRVKEVYSRAKSFTSPPVSLEAQLLWREFFYTAAYATANFDKMVGN 304
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
P C QIPW + E L+ W + +TG+PWIDA MTQLR+ GW+HHLARHAVACFLTRGD++V
Sbjct: 305 PTCKQIPWKDDDELLSAWRDGRTGYPWIDAAMTQLRKWGWMHHLARHAVACFLTRGDMFV 364
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE+G +FD LL+DADWS+N G W+WLS S+FF Q+ Y P+ F +K D G++I
Sbjct: 365 YWEKGRDVFDRLLIDADWSINNGNWLWLSASAFFNQYHRIYSPITFAKKYDRQGNYI 421
>gi|156383455|ref|XP_001632849.1| predicted protein [Nematostella vectensis]
gi|156219911|gb|EDO40786.1| predicted protein [Nematostella vectensis]
Length = 513
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/311 (45%), Positives = 187/311 (60%), Gaps = 3/311 (0%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ + ++++ +L ++E N GK P+T+ + ++ P P V +
Sbjct: 133 LGVEVIQRVSHTLYDVETVLETNDGKLPMTFDEMAKTAEQLGPPCPPCQTVDKTVFGACL 192
Query: 61 TPLRDDHDEKYGVPTLEELGFD--IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRP 118
TP+ DH +KYGVP L E G E W GGE EA+RRL L++ A F
Sbjct: 193 TPVGPDHADKYGVPLLSEFGMKELKEATAKKYWTGGEPEALRRLSAALKKCA-ENDFEER 251
Query: 119 KMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYC 178
T + ++ LSP++RFGCLS RL+Y L Y + KK+ PP +L L+ RE F
Sbjct: 252 GWTIDEMFSNDAHLSPYMRFGCLSPRLYYQQLALTYMKEKKSIPPATLFTGLVRRELFLH 311
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
A+ N + D+ML NP+ VQ PW+ N E L +W +TGFPWIDAIM QLREEGWIHHLAR
Sbjct: 312 VASHNADLDKMLDNPLSVQFPWEENKEGLERWKEGKTGFPWIDAIMRQLREEGWIHHLAR 371
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
AV CFLTRG LWVSWEEG K FDEL LDA+WS+NA W+WLSCSS+ YCPV+
Sbjct: 372 QAVGCFLTRGCLWVSWEEGFKAFDELQLDAEWSLNASNWLWLSCSSYVHGAVPWYCPVEV 431
Query: 299 GRKADPNGDFI 309
G+K DP GD+I
Sbjct: 432 GKKVDPTGDYI 442
>gi|156378195|ref|XP_001631029.1| predicted protein [Nematostella vectensis]
gi|156218062|gb|EDO38966.1| predicted protein [Nematostella vectensis]
Length = 498
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 138/293 (47%), Positives = 191/293 (65%), Gaps = 2/293 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+I+E N GK P+ + F++IV K+ P +T P+ H EK+GVP+L
Sbjct: 139 QILEMNEGKPPVLFKDFEAIVRKLGPPENPVESITRKSFMNCICPITSTHSEKFGVPSLA 198
Query: 78 ELGFD-IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
ELG + W GGE EA+ RL LE K ++ + L S+T LSP+L
Sbjct: 199 ELGIKPADVTCGDMWVGGEREALNRLG-ILEDKILGSNSSKNCDGSSVLFPSRTQLSPYL 257
Query: 137 RFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
RFGCLS +L+Y L Y +++ +PPP+SL+ QL+WREFF+ A++NPN D++ NP+C+
Sbjct: 258 RFGCLSPKLYYKKLTGAYVKMQFSPPPMSLYRQLIWREFFFTLASKNPNMDQVNDNPLCI 317
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QI W+ N + W TGFPWIDAIM QL++EGWIHHLAR +V CFLTRG LW+SWEE
Sbjct: 318 QISWEENKDHFLCWKQGNTGFPWIDAIMRQLQKEGWIHHLARLSVGCFLTRGCLWISWEE 377
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G++ F+EL LDA+WS+N+G W+WLSCS+FF +CPV+ G+K DP+G +I
Sbjct: 378 GLRAFEELQLDAEWSMNSGSWLWLSCSAFFHGQIPWFCPVEVGKKLDPSGSYI 430
>gi|260829106|ref|XP_002609503.1| hypothetical protein BRAFLDRAFT_230208 [Branchiostoma floridae]
gi|229294860|gb|EEN65513.1| hypothetical protein BRAFLDRAFT_230208 [Branchiostoma floridae]
Length = 522
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 192/316 (60%), Gaps = 29/316 (9%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKY 71
+L + +IIE NGG PLTY QFQ ++ +P A T + PL DE+Y
Sbjct: 137 TLYNIDKIIEYNGGSAPLTYRQFQKVLKDFGAPPQASETATAEHFASCSVPLEALRDERY 196
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
+ TLEELG E P + GGETE +RR+E+HL+ + WV F +PK P SLL S TG
Sbjct: 197 NMVTLEELGMRCEH--PSKFVGGETEGLRRVEKHLQNQGWVTQFEKPKTAPTSLLPSTTG 254
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
LSP+ FGCLS R FYH L+K+Y +++ S +++ TR ML
Sbjct: 255 LSPYFSFGCLSVRHFYHRLDKIYAKLRSHQTSASSKSRVM------IERTRCVLLLEMLS 308
Query: 192 NPICVQIPWDVNMEALAKWAN------------------AQTGFPWIDAIMTQLREEGWI 233
C I + + L W N A+TGFPWIDAIM+QL++EGW+
Sbjct: 309 R-TCRLIARLIFL--LCNWHNRFLQLTISDFVACFLSSVAETGFPWIDAIMSQLQKEGWV 365
Query: 234 HHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCY 293
HHLARHAVACFLTRGDLW+SWEEG K+F+ELLLDAD+SVNAG WMWLS S+F+ Q+ +
Sbjct: 366 HHLARHAVACFLTRGDLWISWEEGQKVFEELLLDADYSVNAGNWMWLSGSAFYHQYTRIF 425
Query: 294 CPVKFGRKADPNGDFI 309
CPV+FG++ DP+G FI
Sbjct: 426 CPVRFGKRTDPDGTFI 441
>gi|159479960|ref|XP_001698054.1| cryptochrome photoreceptor [Chlamydomonas reinhardtii]
gi|158273853|gb|EDO99639.1| cryptochrome photoreceptor [Chlamydomonas reinhardtii]
Length = 595
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/303 (48%), Positives = 190/303 (62%), Gaps = 5/303 (1%)
Query: 9 LTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD 68
++ +L + ++ +NGG PLT F +V ++ P + +
Sbjct: 132 ISHTLYDTDMLVARNGGAAPLTMQSFTKLVDRVGDPPAPAPDPP-AAMPPPAEDMPSAAP 190
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA- 127
GVPT +E+GF L +KGGETEA+ RLE + WVA F +P P +
Sbjct: 191 AATGVPTWQEVGFKEPPLT--VFKGGETEALARLEAAFQDPKWVAGFQKPDTDPSAWEKP 248
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCAATRNPNF 186
+ T LSP+L+FGCLS RLF+ L ++Y+R + PP+SL GQLLWREFFY + PNF
Sbjct: 249 ATTVLSPYLKFGCLSARLFHARLLEVYRRHPAHSQPPVSLRGQLLWREFFYTVGSTTPNF 308
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
RM GNP+C QI WD N E LA W A+TGFPWIDAIMTQL GW+HHLARH+VACFLT
Sbjct: 309 HRMAGNPVCKQIDWDDNPEFLAAWREARTGFPWIDAIMTQLVTWGWMHHLARHSVACFLT 368
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
RGDL+VSWE GM++F+E L+D D +NA WMWLS S+FF Q+F Y PV FG+K DP G
Sbjct: 369 RGDLYVSWERGMEVFEEHLIDQDHYLNAANWMWLSASAFFSQYFRVYSPVVFGKKYDPEG 428
Query: 307 DFI 309
FI
Sbjct: 429 RFI 431
>gi|156752078|gb|ABU93791.1| cryptochrome 2 [Carassius auratus]
Length = 164
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/152 (85%), Positives = 140/152 (92%)
Query: 158 KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGF 217
K + PPLSL+GQLLWREFFY AAT NP FD+M GNPICV+IPWD N EALAKWA A+TGF
Sbjct: 1 KTSTPPLSLYGQLLWREFFYTAATTNPRFDKMEGNPICVRIPWDKNPEALAKWAEAKTGF 60
Query: 218 PWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMW 277
PWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG W
Sbjct: 61 PWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSW 120
Query: 278 MWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
MWLSCSSFFQQFFHCYCPV FGR+ DPNGDFI
Sbjct: 121 MWLSCSSFFQQFFHCYCPVGFGRRTDPNGDFI 152
>gi|79313247|ref|NP_001030703.1| (6-4)DNA photolyase [Arabidopsis thaliana]
gi|332642183|gb|AEE75704.1| (6-4)DNA photolyase [Arabidopsis thaliana]
Length = 445
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/280 (51%), Positives = 192/280 (68%), Gaps = 9/280 (3%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG-VPTLE 77
IIEKNGGK PL+Y F + + PS A++ + ++ + P+ D + VP+LE
Sbjct: 168 IIEKNGGKPPLSYQSFLKVAGE---PSCAKSEL--VMSYSSLPPIGDIGNLGISEVPSLE 222
Query: 78 ELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSPF 135
ELG+ D E ++GGE+EA++RL + + KAWVA+F +PK P + L + T +SP+
Sbjct: 223 ELGYKDDEQADWTPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPATTVMSPY 282
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
L+FGCLS+R FY L +YK +KK PP+SL GQLLWREFFY A PNFD+M GN I
Sbjct: 283 LKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKMKGNRI 342
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
C QIPW+ + LA W + +TG+PWIDAIM QL + GW+HHLARH VACFLTRGDL++ W
Sbjct: 343 CKQIPWNEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIHW 402
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYC 294
E+G +F+ LL+D+DW++N G WMWLSCSSFF Q +C
Sbjct: 403 EQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQALSPFC 442
>gi|167526345|ref|XP_001747506.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773952|gb|EDQ87586.1| predicted protein [Monosiga brevicollis MX1]
Length = 486
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 132/248 (53%), Positives = 174/248 (70%), Gaps = 2/248 (0%)
Query: 64 RDDHDEKYGVPTLEELGFD-IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTP 122
+D D+ Y VPTL+E+G+ I+ + GGE EA++RLE +++K W+A+F +PK P
Sbjct: 149 KDRQDKSYDVPTLKEMGYSPIKAPQMVLFPGGEREALKRLEHFIKKKNWIATFEKPKTNP 208
Query: 123 QSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAAT 181
+L TGLSP+++ GCLS R F++D+ K+Y K + PP SLHGQLL+RE F+
Sbjct: 209 AALDPDTTGLSPYMKMGCLSVRKFWYDVQKVYDEKKDHSTPPESLHGQLLFRELFHLCGY 268
Query: 182 RNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
NFD+M GN IC QI WD + + L W N++TG+PWIDA M QLR EGW+HHLARHAV
Sbjct: 269 AVKNFDKMKGNRICRQIDWDYSEKFLDAWENSKTGYPWIDACMAQLRHEGWMHHLARHAV 328
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRK 301
ACFLTRGDL+ SWE G +IF++ L+DADW +N WMWLSCSSFF Q+F Y P+ FG+K
Sbjct: 329 ACFLTRGDLYQSWEHGARIFEKHLVDADWHLNNANWMWLSCSSFFYQYFRVYSPIGFGQK 388
Query: 302 ADPNGDFI 309
D G FI
Sbjct: 389 YDKEGAFI 396
>gi|297834434|ref|XP_002885099.1| 6-4 photolyase [Arabidopsis lyrata subsp. lyrata]
gi|297330939|gb|EFH61358.1| 6-4 photolyase [Arabidopsis lyrata subsp. lyrata]
Length = 546
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/305 (48%), Positives = 199/305 (65%), Gaps = 20/305 (6%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG-VPTLE 77
+IEKNGGK PL+Y F I + PS A++ + ++ + P+ D + VP+LE
Sbjct: 149 VIEKNGGKPPLSYQSFLKIAGE---PSCAKSEL--VMSYSSLPPVGDVGNLGISEVPSLE 203
Query: 78 ELGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSP 134
ELG+ D E ++GGE+EA++RL + + KAWVA+F +PK P + L + T +SP
Sbjct: 204 ELGYRDDDEQADWTPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPATTVMSP 263
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+L+FGCLS+R FY L +YK +KK PP+SL GQLLWREFFY A PNFD+M GN
Sbjct: 264 YLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKMKGNR 323
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
IC QIPW+ + LA W + +TG+PWIDAIM QL + GW+HHLARH VACFLTRGDL++
Sbjct: 324 ICKQIPWNEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIH 383
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHC---------YCPVKFGRKADP 304
WE+G +F+ LL+D+DW++N G WMWLSCSSFF Q C V K DP
Sbjct: 384 WEQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQAIKATFVMLTLVSQCIVMVS-KYDP 442
Query: 305 NGDFI 309
+G +I
Sbjct: 443 DGKYI 447
>gi|308803621|ref|XP_003079123.1| cryptochrome-like protein 1 (ISS) [Ostreococcus tauri]
gi|116057578|emb|CAL53781.1| cryptochrome-like protein 1 (ISS) [Ostreococcus tauri]
Length = 1646
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 153/339 (45%), Positives = 196/339 (57%), Gaps = 51/339 (15%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSP-SPAEA----PVTPLLVRQATTPLRDDHDEKYGV 73
++EK G P TY F IV KM +P +P +A P + + T L + YG+
Sbjct: 1234 MLEKCKGAPPTTYQGFFKIVDKMGAPNAPIDAMEKMPGSFASSDEETKALVQGVADAYGI 1293
Query: 74 PTLEELGF----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS----- 124
PTLE+LG+ D EG GGETE +RRL L RK W+ F +P P +
Sbjct: 1294 PTLEDLGYEPLGDDEGF---PGVGGETEGLRRLRLMLARKEWIGQFEKPSTNPTTRFHGL 1350
Query: 125 --------------------------------LLASQTGLSPFLRFGCLSTRLFYHDLNK 152
++ S T LSP+++FGC+S R+FYH+L
Sbjct: 1351 SQSGKTKPKSPFEIAAGRSKDGDASTSGAEALMIPSTTALSPYMKFGCVSPRVFYHELTA 1410
Query: 153 LYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
+YK + K + PP SL GQL+WREF+Y A NFD+M GN IC QIPW + E A W
Sbjct: 1411 VYKELEGKHSKPPTSLMGQLMWREFYYLVAAGTKNFDKMEGNAICRQIPWKKDRELFAAW 1470
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
NAQTGFPWIDA MTQLR EGW+HHLARHAVACFLTRGDL++ WE G FD L+DADW
Sbjct: 1471 ENAQTGFPWIDAAMTQLRREGWLHHLARHAVACFLTRGDLFIHWEWGRDAFDRDLVDADW 1530
Query: 271 SVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++N G WMWLSCS+FF Q+F Y P+ F +K D +G ++
Sbjct: 1531 ALNNGNWMWLSCSAFFYQYFRVYSPIAFAKKYDKDGQYV 1569
>gi|147865945|emb|CAN80978.1| hypothetical protein VITISV_029095 [Vitis vinifera]
Length = 633
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/286 (51%), Positives = 195/286 (68%), Gaps = 13/286 (4%)
Query: 9 LTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD 68
++ +L S II+KNGG+ PL+Y F + + PS A +P++ L P+ D
Sbjct: 262 VSHTLFDSADIIQKNGGRPPLSYQSFLKLAGQ---PSWASSPLSTTL--SWLPPVGDVGT 316
Query: 69 -EKYGVPTLEELGFDIEG---LLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
E VPT++ELG++ G L P +KGGE+EA++RL + K WVA+F +PK P +
Sbjct: 317 CEISNVPTVKELGYEEIGQDELTP--FKGGESEALKRLRESIRDKDWVANFEKPKGDPSA 374
Query: 125 LLA-SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATR 182
L + T LSP+L+FGCLS+R FY L +YK +K+ PP+SL GQLLWR+FFY
Sbjct: 375 FLKPATTVLSPYLKFGCLSSRYFYQCLTDVYKNVKRHTSPPVSLVGQLLWRDFFYTVGFG 434
Query: 183 NPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
PNFDRM GN IC QIPW+ + E LA W A+TG+PWIDAIM QLR+ GW+HHLARH VA
Sbjct: 435 TPNFDRMKGNRICKQIPWNDDDELLAAWREARTGYPWIDAIMVQLRKWGWMHHLARHCVA 494
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ 288
CFLTRGDL+V WE+G +F+ LL+D+DW++N G W+WLSCSSFF Q
Sbjct: 495 CFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQ 540
>gi|145346348|ref|XP_001417651.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577879|gb|ABO95944.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 562
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/350 (45%), Positives = 196/350 (56%), Gaps = 55/350 (15%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-----PAEAPVTPLLVRQATTPLRDD 66
+L ++ K GK P TY QF IV KM +P+ P P + T L
Sbjct: 139 TLYDVEEMLAKCHGKPPTTYSQFLKIVDKMGAPAAALDAPKAMPAPFTGTAEETKELVAG 198
Query: 67 HDEKYGVPTLEELGF----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTP 122
+ YG+PTLEELG+ D EG GGETE +RRL R L R WV +F +P P
Sbjct: 199 VADAYGIPTLEELGYEAMHDDEGFQA---IGGETEGLRRLRRQLSRTEWVHTFQKPDTNP 255
Query: 123 QSLL---------------------------------------ASQTGLSPFLRFGCLST 143
+L S T LSP+++FGC+S
Sbjct: 256 TTLFHALGAKKPKPKSPFEIAARDAGSKNDATNTAANSDMLMTPSTTALSPYMKFGCVSP 315
Query: 144 RLFYHDLNKLYKRI----KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
R+FYH+LN + + + + PP+SL GQL+WREF+Y PNFD+M GNPIC QIP
Sbjct: 316 RVFYHELNAVLAKFEGKGQPSQPPVSLMGQLMWREFYYLVGAGTPNFDKMEGNPICRQIP 375
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ + E A W NAQTGFPWIDA MTQLR EGWIHHLARHAVACFLTRGDL+V WE G
Sbjct: 376 WNKDRELFAAWENAQTGFPWIDAAMTQLRLEGWIHHLARHAVACFLTRGDLFVHWEWGRD 435
Query: 260 IFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
FD L+DADW++N G WMWLSCS FF Q+F Y P F +K D +G ++
Sbjct: 436 TFDRDLVDADWALNNGNWMWLSCSCFFYQYFRVYGPHSFAKKYDKDGAYV 485
>gi|51948352|gb|AAU14280.1| cryptochrome-like protein 1 [Ostreococcus tauri]
Length = 559
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/339 (45%), Positives = 197/339 (58%), Gaps = 51/339 (15%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSP-SPAEA----PVTPLLVRQATTPLRDDHDEKYGV 73
++EK G P TY F IV KM +P +P +A P + + T L + YG+
Sbjct: 147 MLEKCKGAPPTTYQGFFKIVDKMGAPNAPIDAMEKMPGSFASSDEETKALVQGVADAYGI 206
Query: 74 PTLEELGF----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS----- 124
PTLE+LG+ D EG P GGETE +RRL L RK W+ F +P P +
Sbjct: 207 PTLEDLGYEPLGDDEGF-PGV--GGETEGLRRLRLMLARKEWIGQFEKPSTNPTTRFHGL 263
Query: 125 --------------------------------LLASQTGLSPFLRFGCLSTRLFYHDLNK 152
++ S T LSP+++FGC+S R+FYH+L
Sbjct: 264 SQSGKTKPKSPFEIAAGRSKDGDASTSGAEALMIPSTTALSPYMKFGCVSPRVFYHELTA 323
Query: 153 LYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
+YK + K + PP SL GQL+WREF+Y A NFD+M GN IC QIPW + E A W
Sbjct: 324 VYKELEGKHSKPPTSLMGQLMWREFYYLVAAGTKNFDKMEGNAICRQIPWKKDRELFAAW 383
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
NAQTGFPWIDA MTQLR EGW+HHLARHAVACFLTRGDL++ WE G FD L+DADW
Sbjct: 384 ENAQTGFPWIDAAMTQLRREGWLHHLARHAVACFLTRGDLFIHWEWGRDAFDRDLVDADW 443
Query: 271 SVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++N G WMWLSCS+FF Q+F Y P+ F +K D +G ++
Sbjct: 444 ALNNGNWMWLSCSAFFYQYFRVYSPIAFAKKYDKDGQYV 482
>gi|302828718|ref|XP_002945926.1| DNA photolyase [Volvox carteri f. nagariensis]
gi|300268741|gb|EFJ52921.1| DNA photolyase [Volvox carteri f. nagariensis]
Length = 621
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 137/241 (56%), Positives = 171/241 (70%), Gaps = 6/241 (2%)
Query: 72 GVPTLEELGFDIEGLLPPT-WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSL-LASQ 129
VPT +E+GF P T +KGGETEA++RL L WVA F +P P + +
Sbjct: 186 AVPTWQEVGFTEA---PTTIFKGGETEALKRLSASLADSKWVADFKKPDTDPAAFERPAT 242
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIK-KAPPPLSLHGQLLWREFFYCAATRNPNFDR 188
T LSP+++FGCLS RLF+ L ++Y+R + + PP+SL GQLLWREFFY PNF R
Sbjct: 243 TVLSPYVKFGCLSPRLFHARLLEVYRRHRGHSQPPVSLRGQLLWREFFYTVGAHTPNFHR 302
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
M GNP+C QI WD + E LA W A+TGFPWIDAIMTQLR+ GW+HHLARH+VACFLTRG
Sbjct: 303 MDGNPLCKQIDWDDDEELLAAWREARTGFPWIDAIMTQLRQWGWMHHLARHSVACFLTRG 362
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
DL+VSWE GM++F+ELL+D D +NA WMWLS S+FF Q+F Y P+ FG+K DP G F
Sbjct: 363 DLYVSWERGMQVFEELLIDQDHYLNAANWMWLSASAFFSQYFRVYSPISFGKKYDPEGKF 422
Query: 309 I 309
I
Sbjct: 423 I 423
>gi|303283874|ref|XP_003061228.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457579|gb|EEH54878.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 559
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/279 (51%), Positives = 173/279 (62%), Gaps = 44/279 (15%)
Query: 72 GVPTLEELGF----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
GVPTLEELG+ D EG +GGETE + RL R L RK W+A F +P +P SL A
Sbjct: 206 GVPTLEELGYPELPDDEGF---PARGGETEGLDRLRRMLSRKTWIAEFQKPMTSPTSLWA 262
Query: 128 -----------------------------------SQTGLSPFLRFGCLSTRLFYHDLNK 152
S T LSP+L+FGC+S R FYH+L
Sbjct: 263 VVGADGKTQKPANPFEAASKASKSKTVGAEAFLAPSTTALSPYLKFGCVSPRTFYHELKD 322
Query: 153 LYK--RIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
+ + K + PP+SL GQLLWREF+Y AA PN+ +M GNPIC QIPW + E LA W
Sbjct: 323 VLNDAKGKHSAPPVSLEGQLLWREFYYLAAFGTPNYHKMEGNPICRQIPWTWDEERLAAW 382
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
+TGFPWIDA M QLR+EGW+HHLARHAVACFLTRGDL+V WE G K+FD L+DAD
Sbjct: 383 EEGRTGFPWIDACMHQLRQEGWLHHLARHAVACFLTRGDLFVHWEAGAKVFDRDLVDADP 442
Query: 271 SVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++N G WMWLSCS FF Q+F Y PV FG+K D +G FI
Sbjct: 443 ALNYGNWMWLSCSCFFYQYFRVYGPVSFGKKYDKDGTFI 481
>gi|195148599|ref|XP_002015258.1| GL19603 [Drosophila persimilis]
gi|194107211|gb|EDW29254.1| GL19603 [Drosophila persimilis]
Length = 303
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 153/209 (73%), Gaps = 1/209 (0%)
Query: 102 LERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-A 160
++ L + WVA F +P P SL S T LSP+L+FGCLS R+F+ L + KR K +
Sbjct: 1 MKESLRDELWVARFEKPNTAPNSLEPSTTVLSPYLKFGCLSARIFHQQLKAILKRQSKHS 60
Query: 161 PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWI 220
PP+SL GQLLWREF+Y A PNFDRMLGN C+QIPW + L W + +TG+P+I
Sbjct: 61 QPPVSLIGQLLWREFYYTVAAAEPNFDRMLGNVYCLQIPWQEQADHLEAWTHGRTGYPFI 120
Query: 221 DAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL 280
DAIM QLR+EGWIHHLARHAVACFLTRGDLW+SWE G ++F++LLLD DW++NAG WMWL
Sbjct: 121 DAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEAGQRVFEQLLLDQDWALNAGNWMWL 180
Query: 281 SCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
S S+FF Q+F Y PV FG+K DP G +I
Sbjct: 181 SASAFFHQYFRVYSPVAFGKKTDPQGHYI 209
>gi|80971694|gb|ABB52817.1| cryptochrome 1 [Sesamia nonagrioides]
Length = 247
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 154/211 (72%)
Query: 70 KYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ 129
K+ +P+L+EL FD GL P + GGETE +RRL ++ R+ WV F +P +P SL S
Sbjct: 37 KFDIPSLDELEFDESGLNPLKYPGGETEGLRRLNMYMARREWVCKFEKPNSSPNSLEPST 96
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
T LSP++ GCLS +LFYH L ++ ++ PP+SL GQL+WREF+Y A NFD+M
Sbjct: 97 TVLSPYISHGCLSAKLFYHKLKEVLNSMRHTEPPVSLLGQLMWREFYYTAGAGTENFDKM 156
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
+GN +C QIPW N E L WA +TG+P++DAIM QL++EGWIHHLARH VACFLTRGD
Sbjct: 157 VGNSVCTQIPWGKNEEHLIAWAEGRTGYPFVDAIMRQLKQEGWIHHLARHMVACFLTRGD 216
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWL 280
LW+SWE+G K+F++ LLD DWS+NAG WMW+
Sbjct: 217 LWISWEQGAKVFEDYLLDYDWSLNAGNWMWV 247
>gi|46560024|gb|AAT00492.1| cryptochrome 2 [Cebus apella]
Length = 166
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/166 (75%), Positives = 144/166 (86%), Gaps = 1/166 (0%)
Query: 114 SFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLW 172
++ RP+M SLLAS TGLSP+LRFGCLS RLFY+ L LYK++K+ + PPLSL GQLLW
Sbjct: 1 NYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLW 60
Query: 173 REFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGW 232
REFFY AAT NP FDRM GNPIC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGW
Sbjct: 61 REFFYTAATNNPRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGW 120
Query: 233 IHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWM 278
IHHLARHAVACFLTRGDLWVSWE G+++FD++LLDAD+SVNAG WM
Sbjct: 121 IHHLARHAVACFLTRGDLWVSWESGVRVFDDVLLDADFSVNAGSWM 166
>gi|390351006|ref|XP_786331.2| PREDICTED: cryptochrome-1-like [Strongylocentrotus purpuratus]
Length = 439
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/315 (41%), Positives = 193/315 (61%), Gaps = 9/315 (2%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
M ++++ +L + IIEKNGG P+TY F V ++ P P+ ++ +
Sbjct: 121 MKVECIERVSHTLWNPDIIIEKNGGTPPITYSMFMECVTEIGHPP---RPMPDPILTKVN 177
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLL--PPTWKGGETEAMR--RLERHLERKAWVASFG 116
+ D +E+ +P+LE +G ++E WKGGET A+ R+ E +A+ +
Sbjct: 178 MKIPSDFEERCALPSLEVMGVNMECTEQEKKVWKGGETRALELFRVRILHEEEAFKGGYC 237
Query: 117 RPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFF 176
P LL + LS +LRFGCLS R FY ++ Y +KK P L Q++WRE+F
Sbjct: 238 LPNQYMPDLLGTPKSLSAYLRFGCLSVRRFYWKIHDTYSELKKEVSPSHLTAQVIWREYF 297
Query: 177 YCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHL 236
Y + N +F++M NPIC+ I W + E L W + +TG+PWIDA M QL+ EGWIH +
Sbjct: 298 YTMSVGNIHFNKMKENPICLNIEWKEDDEKLKAWTDGRTGYPWIDACMKQLKYEGWIHQV 357
Query: 237 ARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF--FQQFFHCYC 294
RHA ACFLTRGDLW+SWE+G+++FD+ LLDADWS+ AG WMW+S S+F F Q +C+C
Sbjct: 358 GRHATACFLTRGDLWISWEDGLQVFDKYLLDADWSICAGNWMWISSSAFEKFLQCPNCFC 417
Query: 295 PVKFGRKADPNGDFI 309
PV++GR+ DP G+++
Sbjct: 418 PVRYGRRMDPTGEYV 432
>gi|449018268|dbj|BAM81670.1| 6-4 photolyase [Cyanidioschyzon merolae strain 10D]
Length = 519
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 195/326 (59%), Gaps = 35/326 (10%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGK-TPLTYHQFQSIVAK--------MDSPSPAEAPV 51
+ + + T +L I + G + TPLTY F + V + +D+P+PA
Sbjct: 127 LGIEVRTRATHTLYDPEDIRRELGDRPTPLTYKSFYAFVTERLGQPMSALDAPAPASGFQ 186
Query: 52 TPLLVRQATTPLRDDHDEKYGVPTLEEL----GFDIEGLLPPTWKGGETEAMRRLERHL- 106
TP D + Y VP+L EL G ++E ++GGETEA+RR+E L
Sbjct: 187 TP-----------DVDLDTYTVPSLSELEAYQGLEVET----PFRGGETEALRRMENFLR 231
Query: 107 ERKAWVASFGRPKMTPQSL-LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS 165
ER V SF +P +P + +AS T LSP+ +FGCLS RLF + L + PP+S
Sbjct: 232 ERADEVRSFAKPATSPTAWPVASTTQLSPYFKFGCLSPRLFVERVRSLRPLQQ---PPVS 288
Query: 166 LHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWD--VNMEALAKWANAQTGFPWIDAI 223
L GQ+ WREFF A P+F +M GNPIC QIPW + W A+TG+PWIDA
Sbjct: 289 LIGQIWWREFFTYVAYVTPHFHQMQGNPICRQIPWREAADDARYRAWEEARTGYPWIDAC 348
Query: 224 MTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS 283
M QLR+EGW+HHLARHAVACFLTRGDLWVSWE G + FD LL+DAD+S+N W+WLS S
Sbjct: 349 MVQLRQEGWLHHLARHAVACFLTRGDLWVSWERGRETFDRLLVDADYSLNNANWLWLSSS 408
Query: 284 SFFQQFFHCYCPVKFGRKADPNGDFI 309
+FF Q++ Y P+ F +K DPNG+++
Sbjct: 409 AFFHQYYRVYSPISFPQKYDPNGEYV 434
>gi|403373370|gb|EJY86604.1| Cryptochrome 5 [Oxytricha trifallax]
Length = 570
Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 135/291 (46%), Positives = 181/291 (62%), Gaps = 8/291 (2%)
Query: 23 NGGKTPLTYHQFQSIV--AKMDSP--SPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEE 78
+ G+T Y FQ + K++SP P E P P + L+ ++ VP++ +
Sbjct: 144 DAGETCKNYGDFQKFMRDKKIESPLDKPKELPQLPNNYEKLLKHLKIEYSN--DVPSISD 201
Query: 79 LGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
L + E + + GGET+A+ +E +++ K V SF +P +P SL S T LSP+L+F
Sbjct: 202 LDRN-EKDVTTHFIGGETKALEIMEEYIKDKRRVNSFSKPFTSPNSLKPSTTALSPYLKF 260
Query: 139 GCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQI 198
GCLS RLF H+ K R PP+SL GQ+ WREFFY + NF M GNP+C QI
Sbjct: 261 GCLSIRLF-HEKVKSVLRSDCTQPPVSLIGQIYWREFFYAKSYTVKNFHFMQGNPLCKQI 319
Query: 199 PWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGM 258
W+ + E + KW QTGFP IDA+M QLR+EGW+HHLARH VACFLTRG L+ WE G
Sbjct: 320 NWNKDEEIIKKWEMGQTGFPAIDAVMNQLRQEGWMHHLARHLVACFLTRGHLYQHWERGR 379
Query: 259 KIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+FD+ LLDAD+++N WMWLSCS+FF Q++ Y PV F +K D NGDFI
Sbjct: 380 DVFDKYLLDADYALNNANWMWLSCSAFFSQYWKVYSPVSFFQKTDKNGDFI 430
>gi|405961052|gb|EKC26912.1| Cryptochrome-1 [Crassostrea gigas]
Length = 517
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 186/297 (62%), Gaps = 12/297 (4%)
Query: 22 KNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGF 81
NGG PLT+ F + + + P PV + P+ +HD+++G+PTLE+L
Sbjct: 117 NNGGSPPLTFSLFNLVTSTI---GPPPRPVEDPDFTDISLPVSQNHDKQFGIPTLEDLNV 173
Query: 82 ----DIEGLLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPKMTPQSLLASQTGLSPF 135
+ + W GGE++A+ L + E A+ + P LL+ LS
Sbjct: 174 RPECEEQNKRLVEWLGGESKALELLAIRMKHEETAYENGYVMPNQYHPDLLSPPLSLSAH 233
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKKA-PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
LRFGCLS R FY ++ ++ +K + P+SL QL+WRE+FY A N N+D+M NPI
Sbjct: 234 LRFGCLSVRKFYWSIHDKFEEVKPSIGAPVSLSAQLMWREYFYTMAINNINYDKMETNPI 293
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
C+ IPW N E KW +TG+PWIDAIM QLR EGW+HH+ARHAV+CFLTRGDLW++W
Sbjct: 294 CLNIPWYDNPEHEEKWTKGETGYPWIDAIMKQLRYEGWVHHVARHAVSCFLTRGDLWLNW 353
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQ--QFFHCYCPVKFGRKADPNGDFI 309
E G+K+F + LLDADWSV AG WMW+S S+F + Q +C+CPV++G++ DP+G+++
Sbjct: 354 EVGLKVFYKYLLDADWSVCAGNWMWVSSSAFEKVLQCPNCFCPVRYGKRMDPSGEYV 410
>gi|145881071|gb|ABP97099.1| cryptochrome CRY2 [Acropora millepora]
Length = 520
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/292 (44%), Positives = 181/292 (61%), Gaps = 8/292 (2%)
Query: 23 NGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELG-- 80
+ G PL + +F+ V + P V L TP+ DH + YGVP L+E+G
Sbjct: 157 SSGIVPLLFDEFKESVLQKRQPEKPVPKVGRKLFGACVTPVGSDHQQCYGVPRLDEIGGK 216
Query: 81 FDIEG-LLPPTWKGGETEAMRRLERHLERKAWVA--SFGRPKMTPQSLLASQTGLSPFLR 137
F G + +KGGE+EA++R+E L+ W+ F P++T SLL S T LSP+LR
Sbjct: 217 FSKSGSVCSELYKGGESEALKRMETALQ---WMVKNDFTEPEITIHSLLXSATHLSPYLR 273
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
GCLS RL + + + Y + K PP L +LLWREFF+ + P+ M+ NPI ++
Sbjct: 274 CGCLSPRLLHQRITEEYIKSKGVSPPSELFVKLLWREFFFVVGGQIPDAHEMINNPISLE 333
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
IPW+ ++E L +W TGFPWIDAIM QLR EGWIH++AR AVA FLTRG LWV+WEEG
Sbjct: 334 IPWEDSVEYLERWKKGTTGFPWIDAIMRQLRTEGWIHNIARRAVASFLTRGCLWVNWEEG 393
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
K+FDE LDA+ S+N G W+W+S S+F + +CPV G+K DP G+++
Sbjct: 394 FKVFDEFQLDAERSLNVGNWLWVSTSTFVKGPVPWFCPVGVGKKIDPTGEYV 445
>gi|255084421|ref|XP_002508785.1| predicted protein [Micromonas sp. RCC299]
gi|226524062|gb|ACO70043.1| predicted protein [Micromonas sp. RCC299]
Length = 566
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 166/282 (58%), Gaps = 44/282 (15%)
Query: 72 GVPTLEELGFD-IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSL----- 125
G+P+LE LG++ I+ +GGETE + RL + L R ++A F +P+ P L
Sbjct: 202 GIPSLERLGYEPIKAGEGFPARGGETEGLARLRKMLARTTYIAEFKKPQTNPTELWTPVL 261
Query: 126 -----------------------------------LASQTGLSPFLRFGCLSTRLFYHDL 150
+ T LSP+L+FGC+S R F+H+L
Sbjct: 262 GKEGKVKGAPPANPFEAAKKSSKEPKSTQLAEAFMAPATTALSPYLKFGCVSPRTFWHEL 321
Query: 151 NKLYK---RIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEAL 207
+ K + PP SL GQLLWREF+Y A PN+DRM GN IC QIPW + E L
Sbjct: 322 RAVLDVELGGKHSKPPESLEGQLLWREFYYLAGYGTPNYDRMAGNRICRQIPWTWDEERL 381
Query: 208 AKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLD 267
A W ++TGFPWIDA M QL++EGW+HHLARHAVACFLTRGDL+V WE G +FD L+D
Sbjct: 382 AAWEESRTGFPWIDACMMQLKQEGWMHHLARHAVACFLTRGDLFVHWEAGAAVFDRELVD 441
Query: 268 ADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
ADW++N G WMWLSCS FF Q+F Y PV FG+K D G +I
Sbjct: 442 ADWALNNGNWMWLSCSCFFYQYFRVYGPVSFGKKYDKEGAYI 483
>gi|444511893|gb|ELV09967.1| Cryptochrome-1 [Tupaia chinensis]
Length = 463
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 112/131 (85%), Positives = 121/131 (92%)
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
AAT NP FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLAR
Sbjct: 199 AATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLAR 258
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
HAVACFLTRGDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV F
Sbjct: 259 HAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGF 318
Query: 299 GRKADPNGDFI 309
GR+ DPNGD+I
Sbjct: 319 GRRTDPNGDYI 329
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 54/76 (71%), Gaps = 6/76 (7%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL
Sbjct: 127 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLS 183
Query: 65 DDHDEKYGVPTLEELG 80
DDHDEK+GVP+LEEL
Sbjct: 184 DDHDEKFGVPSLEELA 199
>gi|325180456|emb|CCA14862.1| cryptochrome putative [Albugo laibachii Nc14]
Length = 639
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/368 (39%), Positives = 194/368 (52%), Gaps = 60/368 (16%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVA-------------KMDSPSPA 47
++ +E +L ++IEKNGGK P TY F VA ++
Sbjct: 181 LNVHVETTHGYTLYDQDKVIEKNGGKAPATYTAFLRTVATFPEPPKPLPVPLRVSGWDDC 240
Query: 48 EAPVTPLLVR--QATTPLRDDHDEK---------------------YGVPTLEELGFDIE 84
+ LV Q D+ ++ + VP L E GF+
Sbjct: 241 REGLYECLVEFAQKGQDCLDEENQTTKTLSSFSQSWIDVIAGPEKLFRVPELSEFGFEKP 300
Query: 85 GLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFGCLS 142
G + GGE A++ L+ + + + V F +PK +P S+ T LSP+L FGC+S
Sbjct: 301 GRHSFIY-GGENIALKILQTYCKNEGQVVKFEKPKTSPAETCPSKSTTSLSPYLYFGCMS 359
Query: 143 TRLFYHDLNKLYKRIKKA--PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW 200
TR FYH + + R KA PP+SL GQLLWREFF+C NP FD+M GNP+C+ I W
Sbjct: 360 TRTFYHRVRDIQNRHAKASSAPPVSLDGQLLWREFFHCNGHANPQFDKMEGNPLCLYIDW 419
Query: 201 DVNM--------------EALAK-----WANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
+ E LAK W QTG+PWIDAIM QL+EEGW+HHLARH+V
Sbjct: 420 RWHTLPSTKEEEDALPEDEKLAKAQFEAWKEGQTGYPWIDAIMIQLKEEGWMHHLARHSV 479
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRK 301
ACFLTRGDL++SW G+++F E L+D DWS+N G W+WLS S+FF +F Y P FG+K
Sbjct: 480 ACFLTRGDLYISWVRGLEVFQERLIDHDWSINCGNWLWLSASAFFTAYFRVYSPSTFGKK 539
Query: 302 ADPNGDFI 309
D G FI
Sbjct: 540 WDAEGKFI 547
>gi|412988942|emb|CCO15533.1| predicted protein [Bathycoccus prasinos]
Length = 574
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/327 (44%), Positives = 184/327 (56%), Gaps = 42/327 (12%)
Query: 25 GKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVR---QATTPLRDDHDEKYGVPTLEELGF 81
G P T FQ ++A + P +R A L + G+PTLE+LG+
Sbjct: 168 GIPPSTMGAFQKVLANVGEPPSPVPEPPKNSLRVIPNAGDALSKEFKYANGIPTLEDLGY 227
Query: 82 DIEGLLPPTWKGGETEAMRRLERHLERKA----WVASFGRPKMTPQSLLA---------- 127
+ L KGGETE +RR+ L R +V F +P+ +P L A
Sbjct: 228 KAKSLSFKGGKGGETEGLRRMRGALCRGGDGYKYVQEFDKPQSSPCQLFAKEKGSGKALN 287
Query: 128 ----------------------SQTGLSPFLRFGCLSTRLFYHDLNKLYK---RIKKAPP 162
S T LSP L+FG +S R FY +L + K + K P
Sbjct: 288 PFEMAKKASSSSSPKEESLLWPSTTALSPHLKFGTVSVRQFYFELQDILKNELKGKHTNP 347
Query: 163 PLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDA 222
P SL GQ+LWREF+Y A PN+D+M+GN IC QI W + E LAKW NAQTGFPWIDA
Sbjct: 348 PTSLMGQILWREFYYVNACGTPNYDKMVGNRICKQIKWKHDPENLAKWENAQTGFPWIDA 407
Query: 223 IMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSC 282
MTQL+EEGW+HHLARHAVACFLTRGDL++SWEEG ++FD L+DADW++N G WMWLS
Sbjct: 408 AMTQLKEEGWMHHLARHAVACFLTRGDLFISWEEGARVFDRDLVDADWALNNGNWMWLSA 467
Query: 283 SSFFQQFFHCYCPVKFGRKADPNGDFI 309
SSFF Q+F Y P F +K D G ++
Sbjct: 468 SSFFYQYFRVYGPHSFAKKYDKEGAYV 494
>gi|45643655|gb|AAS72903.1| cryptochrome 4 [Passer domesticus]
Length = 359
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/241 (53%), Positives = 161/241 (66%), Gaps = 4/241 (1%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKY 71
SL +++RI++ NGG PLTY +F I++ + P VT ++ P E Y
Sbjct: 122 SLYNTQRILDLNGGSPPLTYKRFLHILSLLGDPEVPVRNVTAEDFQRCRAP-DPGLAECY 180
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
VP +L E L P W+GGETE ++RLERHL + WV SF +P+ P SLL S TG
Sbjct: 181 RVPLPVDLKISPESLSP--WRGGETEGLQRLERHLTDQGWVTSFTKPRTVPNSLLPSTTG 238
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRML 190
LSP+ GCLS R F++ L+ +Y + K + PP+SL GQLLWREFFY A+ PNF +M
Sbjct: 239 LSPYFSMGCLSVRTFFYRLSNIYAQAKHHSLPPVSLQGQLLWREFFYTVASATPNFTQMA 298
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
GNPIC+QI W + E L KW AQTGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDL
Sbjct: 299 GNPICLQICWYKDAERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDL 358
Query: 251 W 251
W
Sbjct: 359 W 359
>gi|452822749|gb|EME29765.1| deoxyribodipyrimidine photo-lyase [Galdieria sulphuraria]
Length = 545
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/300 (43%), Positives = 187/300 (62%), Gaps = 14/300 (4%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG---VPT 75
++ K G +P T Q S + ++ P P P+ + PLR + VP
Sbjct: 188 LVAKLNGNSPPT--QMTSFLKFIEQIGP---PPKPIETVRNIPPLRKELLSSISISKVPE 242
Query: 76 LEEL-GFD-IEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSL-LASQT 130
+EE+ G++ I P ++GGE++A+ R+++ L R+ W+ F +P +P SL S T
Sbjct: 243 IEEIPGYELITEPTPCPFQGGESKALERMQQALNREQGKWIVRFSKPHTSPVSLDPPSTT 302
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIK-KAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
LSP+++ G LS RLF+ +L ++ K PP+SL GQL WRE FY P+FD++
Sbjct: 303 VLSPYIKCGALSVRLFFWELKRVEDSFSVKTKPPVSLIGQLYWREHFYLLGYTIPHFDQI 362
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
GNP+C IPW+ E W AQTG+P+IDA MTQL++ GW+HHL RH VACFLTRGD
Sbjct: 363 QGNPLCKTIPWEHRQEWFQAWEQAQTGYPFIDAAMTQLKQWGWLHHLTRHVVACFLTRGD 422
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LW+SWE+G + F++ L+D DWS+NA WMWLSCS+FF ++F Y P+ F +K DP+G++I
Sbjct: 423 LWISWEKGKETFEKYLIDGDWSINAANWMWLSCSAFFTRYFRVYSPIAFPKKYDPHGNYI 482
>gi|443724902|gb|ELU12703.1| hypothetical protein CAPTEDRAFT_226189 [Capitella teleta]
Length = 564
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 187/312 (59%), Gaps = 13/312 (4%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRD 65
++++ +L +IE NGG P T+ + ++ + P P+ +P L+ + PL +
Sbjct: 150 ERISHTLFHPDDVIEANGGNPPHTFSLMKQVLNMLGDPERPSSSPDLSLV----SLPLSN 205
Query: 66 DHDEKYGVPTLEELGFDIEGLLPPT----WKGGETEAMRRLERHL--ERKAWVASFGRPK 119
D D++ + TL++ + E W GGE+ A+ L+ L E A+ F +P
Sbjct: 206 DFDDRCALDTLKDFAGEYEMEEQEEPINKWIGGESRALDLLQGRLKLEENAFKGGFLQPN 265
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCA 179
L+ LSP LRFGCLS R FY ++ +Y +++ P S+ QL+WRE+FY
Sbjct: 266 QYRPDLIGPPLTLSPHLRFGCLSVRYFYWAIHDIYSEVREELAPQSITSQLIWREYFYIM 325
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
+ +N N+ +M NPIC+QIPW + L +W +TG+PWIDA M QLR EGWIHH+ RH
Sbjct: 326 SVKNRNYAQMENNPICLQIPWYRDDNQLERWEMGKTGYPWIDACMNQLRREGWIHHVGRH 385
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQ--QFFHCYCPVK 297
AV+CFLTRGDLW+ WE+G+K+F + LLDADWSV AG WMW+S S+F Q C+ P+
Sbjct: 386 AVSCFLTRGDLWIHWEDGLKVFLKYLLDADWSVCAGNWMWVSSSAFENCLQCPQCFSPIM 445
Query: 298 FGRKADPNGDFI 309
+G + DP G+++
Sbjct: 446 YGMRMDPTGEYV 457
>gi|156752076|gb|ABU93790.1| cryptochrome 1 [Carassius auratus]
Length = 132
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 112/129 (86%), Positives = 119/129 (92%)
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
AAT NP FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLAR
Sbjct: 4 AATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLAR 63
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
HAVACFLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSCSSFFQQFFHCYCPV F
Sbjct: 64 HAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGF 123
Query: 299 GRKADPNGD 307
GR+ DPNGD
Sbjct: 124 GRRTDPNGD 132
>gi|348681082|gb|EGZ20898.1| DNA photolyase [Phytophthora sojae]
Length = 516
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 174/311 (55%), Gaps = 46/311 (14%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+I NGG+ P TY F VAK P+ P AP E P +
Sbjct: 142 VIAGNGGRAPKTYQMFLRAVAKQAKPAEPLPAP------------------ETLPAPVIP 183
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS--QTGLSPF 135
E I GGE +A+ L+ + + VA F +P +P S T LSP
Sbjct: 184 EKHSFI--------YGGEKKALSALKEYFADEERVAKFEKPNTSPAQTPPSPATTILSPH 235
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
L +GCLS R FYH L + +R K + PP+SL GQLLWREF++C NP FD+M +P
Sbjct: 236 LFYGCLSPRTFYHQLRDILQRHKNPSKPPVSLEGQLLWREFYHCHGHANPYFDKMEESPT 295
Query: 195 CVQIPWD-----------VNMEALAK-----WANAQTGFPWIDAIMTQLREEGWIHHLAR 238
C+Q+ W + + LA+ W +TGFPWIDAIM QL+EEGW+HHLAR
Sbjct: 296 CLQVDWRWHTIPEKEEDMTDDDKLARSQFEAWKEGRTGFPWIDAIMIQLKEEGWMHHLAR 355
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
H+VACFLTRGDL++SW G+++F E L+D DWS+NAG W+WLS S FF +F Y P+ F
Sbjct: 356 HSVACFLTRGDLYISWVRGLEVFQERLIDHDWSLNAGNWLWLSSSYFFTAYFRVYSPIAF 415
Query: 299 GRKADPNGDFI 309
G+K DP G FI
Sbjct: 416 GKKWDPEGKFI 426
>gi|257359518|gb|ACV53158.1| cryptochrome-like protein [Crassostrea gigas]
Length = 393
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/283 (44%), Positives = 174/283 (61%), Gaps = 12/283 (4%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSP-SPAEAPVTPLLVRQATTPLRD 65
+K++ +L IIE NGG PLT+ F + + + P P E P + P+
Sbjct: 115 EKVSHTLWDPYEIIENNGGSPPLTFSLFNLVTSTIGPPPRPVEDPD----FTDISLPVSQ 170
Query: 66 DHDEKYGVPTLEELGF----DIEGLLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPK 119
+HD+++G+P+LE+L + + W GGE++A+ L + E KA+ + P
Sbjct: 171 NHDKQFGIPSLEDLNVRPECEEQNKRLVEWLGGESKALELLAIRMKHEEKAYENGYVMPN 230
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA-PPPLSLHGQLLWREFFYC 178
LL+ LS LRFGCLS R FY ++ ++ +K + P+SL QL+WRE+FY
Sbjct: 231 QYHPDLLSPPLSLSAHLRFGCLSVRKFYWSIHDKFEEVKPSMGAPVSLSAQLMWREYFYT 290
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
A N N+D+M NPIC+ IPW N E KW +TG+PWIDAIM QLR EGW+HH+AR
Sbjct: 291 MAINNINYDKMETNPICLNIPWYDNPEHEEKWTQGETGYPWIDAIMKQLRYEGWVHHVAR 350
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS 281
HAV+CFLTRGDLW++WE G+K+F + LLDADWSV AG WMWLS
Sbjct: 351 HAVSCFLTRGDLWLNWEVGLKVFYKYLLDADWSVCAGNWMWLS 393
>gi|403177785|ref|XP_003336224.2| hypothetical protein PGTG_17805 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173202|gb|EFP91805.2| hypothetical protein PGTG_17805 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 731
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 171/267 (64%), Gaps = 32/267 (11%)
Query: 70 KYGVPTLEELGFDIEGLLPPT--WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL- 126
++ +PT+EELG + P T +GGET A+++LE +L+ K V F +PK +P
Sbjct: 330 QFEIPTMEELG-----IQPATSHHRGGETVALQKLEEYLKDKEKVLKFEKPKTSPAEFNP 384
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYK---RIKKAPPPLSLHGQLLWREFFYCAATRN 183
AS T LS +FG LS+RLFY L +L K +IK + PP SL GQLLWR+FF+ ++
Sbjct: 385 ASTTTLSAHFKFGTLSSRLFYARLKQLEKENPKIKASSPPESLIGQLLWRDFFHLQQSQI 444
Query: 184 PNFDRMLGNPICVQIPW---------DVNMEA------------LAKWANAQTGFPWIDA 222
N+ ++ GN +C W DV + L W + TGFPWIDA
Sbjct: 445 ENYHQIEGNRVCRYFDWRLKDRIRRKDVEADGPEDNQDPEAQKNLRAWIDGMTGFPWIDA 504
Query: 223 IMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSC 282
IM QL+ EGWIHHLARH+VACFLTRG L++SWE G ++FD+LL+D D S+N+G WMWLS
Sbjct: 505 IMRQLKTEGWIHHLARHSVACFLTRGHLYISWERGAEVFDDLLIDWDPSLNSGNWMWLSA 564
Query: 283 SSFFQQFFHCYCPVKFGRKADPNGDFI 309
S++FQQ+F Y P++FG+K DPNG+FI
Sbjct: 565 SAYFQQYFRVYSPIQFGKKFDPNGNFI 591
>gi|90085022|dbj|BAE91252.1| unnamed protein product [Macaca fascicularis]
Length = 278
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 105/121 (86%), Positives = 113/121 (93%)
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRG
Sbjct: 1 MEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRG 60
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
DLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNGD+
Sbjct: 61 DLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDY 120
Query: 309 I 309
I
Sbjct: 121 I 121
>gi|224002945|ref|XP_002291144.1| Cryptochrome/Photolyase family 1 [Thalassiosira pseudonana
CCMP1335]
gi|220972920|gb|EED91251.1| Cryptochrome/Photolyase family 1, partial [Thalassiosira pseudonana
CCMP1335]
Length = 556
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/297 (45%), Positives = 175/297 (58%), Gaps = 20/297 (6%)
Query: 27 TPLTYHQFQSIVAKMDS---PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDI 83
P T FQ ++ ++D P P +AP ++ L DD D +P LE
Sbjct: 169 VPSTMSSFQGLLGRIDGGNIPLPLDAPT-----KEEFPQLSDDDDSNKYLP-LEHPSDCE 222
Query: 84 EGLLPPTWKGGETEAMRRLERHL-ERKAWVASFGRPKMTPQSLLA-SQTGLSPFLRFGCL 141
+ L KGGET A+ +L+ + R W ASF +PK + + S T LSP+L GCL
Sbjct: 223 DASLTGIVKGGETLALAQLQSTVTARPDWTASFEKPKTSCTEVSTPSTTVLSPYLSLGCL 282
Query: 142 STRLFYH---DLN-KLYKRIKKAPPPLSLHGQLLWREF----FYCAATRNP-NFDRMLGN 192
S R +H D N K ++ K PP+SLHGQLLWR+F + A ++P ++ RM N
Sbjct: 283 SPRKAWHAVADANRKASSKVNKTKPPVSLHGQLLWRDFNNLIAHSANAQSPGSWGRMQDN 342
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
P C +PW + + L W + +TGFPWIDA M QLR EGWIHHL RHAVACFLTRGDLW
Sbjct: 343 PYCRNVPWSSDPKLLKAWKDGKTGFPWIDACMAQLRTEGWIHHLGRHAVACFLTRGDLWQ 402
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
SWE G F+ LLDAD+++N W+WLSCS FF Q+F CY PV F +K D NG++I
Sbjct: 403 SWEMGADHFEGELLDADYALNNFNWLWLSCSGFFYQYFRCYSPVAFQKKNDVNGNYI 459
>gi|452848446|gb|EME50378.1| hypothetical protein DOTSEDRAFT_145202, partial [Dothistroma
septosporum NZE10]
Length = 640
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 189/346 (54%), Gaps = 58/346 (16%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKM-------DSPSPAEAPVTPLLVRQATTPL-------- 63
+++ +GGK ++ +Q Q+ AK+ ++P+ P L + T P
Sbjct: 142 LVKAHGGKPTMSINQLQAAGAKIGEIEPIVETPTSLPPPGDMKLNIEQTQPAPEPDINKK 201
Query: 64 -RDDHDEKYGV-----------PTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAW 111
RD + Y P+LEELG + P KGGET + RL + LE + +
Sbjct: 202 HRDGEESSYSAGIAGPKGDFAPPSLEELG--MPAATSPH-KGGETVILERLRKILEDEDY 258
Query: 112 VASFGRPKMTPQSLLASQTGL-SPFLRFGCLSTRLFYHDLNKLYKRIKKA-----PPPLS 165
+F +PK +P + T L SP+L FG LS R FYH + ++ K+ KKA PP S
Sbjct: 259 CGTFQKPKTSPAAFEPQSTFLTSPYLHFGALSCRYFYHKIEEIVKKRKKANKTVSTPPES 318
Query: 166 LHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWD---------------------VN 203
L GQLL+R+ ++ A A +F + NP C IPW V
Sbjct: 319 LAGQLLFRDMYFAAQAALGYSFGQTYNNPNCRFIPWHLPSKIDLKTKLITGEYEVDDPVK 378
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
+WA+ TGFPWIDAIM QLR+EGWIHHLARH+VACFLTRG ++SWE G ++F+E
Sbjct: 379 ETEFKRWADGTTGFPWIDAIMRQLRQEGWIHHLARHSVACFLTRGGAYISWERGAEVFEE 438
Query: 264 LLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LL+D + + N G W WLSC++FF QF+ CY P+ FG+K DPNGD+I
Sbjct: 439 LLIDHEAACNIGNWQWLSCTAFFAQFYRCYSPIAFGKKWDPNGDYI 484
>gi|348680511|gb|EGZ20327.1| hypothetical protein PHYSODRAFT_492233 [Phytophthora sojae]
Length = 650
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 131/328 (39%), Positives = 180/328 (54%), Gaps = 38/328 (11%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSP-----SPAEAPVTPLLVRQATTPLRD-------- 65
+I N G+ P TY F +A P +P + P + + + D
Sbjct: 227 VIAGNEGEPPKTYTAFLRSLAMQSKPPKPLPTPEKLPTPTWMPSELYQQVVDYWKVRMKP 286
Query: 66 ----DHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMT 121
++++ +P + + G+ P + GGE A+ L + + V F +PK +
Sbjct: 287 EKIAGPEQQFTLPEVTDFGYAAPERHPFIY-GGEQIALSILRDYCRNEGRVVKFEKPKTS 345
Query: 122 PQSLL--ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA--PPPLSLHGQLLWREFFY 177
P AS T LSP+L FGC+S R F H + + + KA P+SL GQLLWREFF+
Sbjct: 346 PAQTTPSASTTSLSPYLYFGCISPRTFLHHVQSIQEHHAKALSATPVSLDGQLLWREFFH 405
Query: 178 CAATRNPNFDRMLGNPICVQIPWD-----------VNMEALAK-----WANAQTGFPWID 221
C NP FD+M +P C+QI W + + LA+ W + +TGFPWID
Sbjct: 406 CHGRANPYFDKMEESPTCLQIDWRWHTIPEKEEDLTDDDKLARSQFEAWKDGRTGFPWID 465
Query: 222 AIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS 281
AIM QL+EEGW+HHLARH+VACFLTRGDL++SW G++IF E L+D DWS+NAG W+WLS
Sbjct: 466 AIMIQLKEEGWMHHLARHSVACFLTRGDLYISWVRGLEIFQERLIDHDWSINAGNWLWLS 525
Query: 282 CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
S FF +F Y P FG+K DP G FI
Sbjct: 526 SSYFFSAYFRVYSPSTFGKKWDPEGLFI 553
>gi|301121222|ref|XP_002908338.1| cryptochrome, putative [Phytophthora infestans T30-4]
gi|262103369|gb|EEY61421.1| cryptochrome, putative [Phytophthora infestans T30-4]
Length = 568
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 185/346 (53%), Gaps = 60/346 (17%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLV---------------------- 56
+I + GK P TY +F V P+P E TP +
Sbjct: 140 VIASHSGKAPKTYQRFLKAVGAQ--PTPREPIPTPETLPSPTRKHSELYEQIANYWKDRK 197
Query: 57 --------------RQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRL 102
RQ +HD + +P L G++ + GGE +A+ L
Sbjct: 198 LSDEEKEDDLEERERQIDQIAGPEHD--FTLPDLTYFGYETPEKHSFIY-GGEQKALEML 254
Query: 103 ERHLERKAWVASFGRPKMTPQSL--LASQTGLSPFLRFGCLSTRLFYHDLNKLYK-RIKK 159
+ + + VA F +PK +P + S T LSP++ +GCLS R FYH + + + R K
Sbjct: 255 KNYCSDQDRVALFEKPKTSPAQIPPTPSTTVLSPYMFYGCLSPRTFYHQVRSIQRGRKKV 314
Query: 160 APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDV-----NMEALAK----- 209
+ PP+SL GQLLWR+F++C NP FD+M + C+Q+ W N E L+
Sbjct: 315 SVPPVSLIGQLLWRDFYHCHGRANPYFDKMEESSTCLQVNWRYHTIPENEEDLSDDDKLA 374
Query: 210 ------WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
W + +TGFPWIDAIM QL+EEGW+HHLARH+VACFLTRGDL++SW G+++F E
Sbjct: 375 RSQFEAWRDGRTGFPWIDAIMIQLKEEGWMHHLARHSVACFLTRGDLYISWVRGLEVFQE 434
Query: 264 LLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L+D DWS+NAG W+WLS S FF +F Y P+ FG+K+DP G FI
Sbjct: 435 RLIDHDWSLNAGNWLWLSSSYFFTAYFRVYSPISFGKKSDPEGLFI 480
>gi|413936068|gb|AFW70619.1| hypothetical protein ZEAMMB73_082662 [Zea mays]
Length = 397
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/256 (48%), Positives = 164/256 (64%), Gaps = 14/256 (5%)
Query: 1 MSSSIE--KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQ 58
++S IE ++ +L II+KNGG+ PLTY F SI + +P+ E P
Sbjct: 139 LASGIEVLTPVSHTLFDPEEIIKKNGGRPPLTYQSFVSIAGEPPAPAMEEYSELP----- 193
Query: 59 ATTPLRDDHD-EKYGVPTLEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFG 116
PL D + E VPT+EELG+ DI P + GGETEA+RR++ L+ K WVA F
Sbjct: 194 ---PLGDTGEYELLPVPTVEELGYGDISQEEIPPFHGGETEALRRMKESLQNKEWVAKFE 250
Query: 117 RPKMTPQSLLA-SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWRE 174
+PK P + + S T LSP+L+FGCLS+R FYH + +++ ++ PP+SL GQLLWR+
Sbjct: 251 KPKGDPSAFVKPSTTVLSPYLKFGCLSSRYFYHCIQDVHRSVRNHTKPPVSLTGQLLWRD 310
Query: 175 FFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIH 234
FFY + PNFDRM GN IC QIPW N + W + QTG+PWIDAIM QLR GW+H
Sbjct: 311 FFYTVSYGTPNFDRMKGNKICKQIPWSENEDLFVAWRDGQTGYPWIDAIMIQLRNWGWMH 370
Query: 235 HLARHAVACFLTRGDL 250
HLARH+VACFLTRGD+
Sbjct: 371 HLARHSVACFLTRGDM 386
>gi|351713396|gb|EHB16315.1| Cryptochrome-1 [Heterocephalus glaber]
Length = 591
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 113/131 (86%), Gaps = 8/131 (6%)
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
AAT NP FD+M GNPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLAR
Sbjct: 260 AATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLAR 319
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
HAVACFLTRGDLWV F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV F
Sbjct: 320 HAVACFLTRGDLWV--------FEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGF 371
Query: 299 GRKADPNGDFI 309
GR+ DPNGD+I
Sbjct: 372 GRRTDPNGDYI 382
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 6/75 (8%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLR 64
+++ +L +IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TPL
Sbjct: 188 RISHTLYDLDKIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCVTPLS 244
Query: 65 DDHDEKYGVPTLEEL 79
DDHDEKYGVP+LEEL
Sbjct: 245 DDHDEKYGVPSLEEL 259
>gi|226494726|ref|NP_001146620.1| uncharacterized protein LOC100280217 [Zea mays]
gi|219888051|gb|ACL54400.1| unknown [Zea mays]
Length = 421
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/261 (48%), Positives = 165/261 (63%), Gaps = 14/261 (5%)
Query: 1 MSSSIE--KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQ 58
++S IE ++ +L II+KNGG+ PLTY F SI + +P+ E P
Sbjct: 139 LASGIEVLTPVSHTLFDPEEIIKKNGGRPPLTYQSFVSIAGEPPAPAMEEYSELP----- 193
Query: 59 ATTPLRDDHD-EKYGVPTLEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFG 116
PL D + E VPT+EELG+ DI P + GGETEA+RR++ L+ K WVA F
Sbjct: 194 ---PLGDTGEYELLPVPTVEELGYGDISQEEIPPFHGGETEALRRMKESLQNKEWVAKFE 250
Query: 117 RPKMTPQSLLA-SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWRE 174
+PK P + + S T LSP+L+FGCLS+R FYH + +++ ++ PP+SL GQLLWR+
Sbjct: 251 KPKGDPSAFVKPSTTVLSPYLKFGCLSSRYFYHCIQDVHRSVRNHTKPPVSLTGQLLWRD 310
Query: 175 FFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIH 234
FFY + PNFDRM GN IC QIPW N + W + QTG+PWIDAIM QLR GW+H
Sbjct: 311 FFYTVSYGTPNFDRMKGNKICKQIPWSENEDLFVAWRDGQTGYPWIDAIMIQLRNWGWMH 370
Query: 235 HLARHAVACFLTRGDLWVSWE 255
HLARH+VACFLTRGD+ E
Sbjct: 371 HLARHSVACFLTRGDMCCRCE 391
>gi|20336481|gb|AAM19303.1| cryptochrome-2 [Gallus gallus]
Length = 266
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 100/122 (81%), Positives = 113/122 (92%)
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
RM GNPIC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTR
Sbjct: 1 RMEGNPICIQIPWDKNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTR 60
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
GDLW+SWE G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD
Sbjct: 61 GDLWISWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGD 120
Query: 308 FI 309
++
Sbjct: 121 YV 122
>gi|339649212|gb|AEJ87227.1| putative light-receptive cryptochrome [Platynereis dumerilii]
Length = 365
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/262 (46%), Positives = 159/262 (60%), Gaps = 9/262 (3%)
Query: 17 RRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTL 76
+ + + NGG+ P TY F + + P E P P+ DD D+K+G+PTL
Sbjct: 99 KAVCDANGGRPPHTYKLFCQVTDLLGKP---ETPHPDPDFSHVQMPVSDDFDDKFGLPTL 155
Query: 77 EELGFD--IEGLLPP--TWKGGETEAMRRLERHL--ERKAWVASFGRPKMTPQSLLASQT 130
+ELG + E P W+GGET A+ LE L ER A+ A + P L+
Sbjct: 156 KELGCEPECEEQEKPFNKWQGGETGALELLETRLMIERTAYKAGYIMPNQYIPDLVGPPR 215
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRML 190
+SP LRFG LS R FY DL+ Y + +L QL+WRE+FYC + NP+FD+M
Sbjct: 216 SMSPHLRFGALSIRKFYWDLHNNYAEVCGGEWLGALTAQLVWREYFYCMSYGNPSFDKME 275
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
GNPIC+QIPW + EAL KW QTGFPWIDA M QLR EGW+HH+ RHAVACFLTRGDL
Sbjct: 276 GNPICLQIPWYKDEEALEKWKQGQTGFPWIDACMRQLRYEGWMHHVGRHAVACFLTRGDL 335
Query: 251 WVSWEEGMKIFDELLLDADWSV 272
W+SW +G++ F + +LD DWSV
Sbjct: 336 WISWVDGLEAFYKYMLDGDWSV 357
>gi|124107288|dbj|BAF45421.1| cryptochrome precursor [Dianemobius nigrofasciatus]
Length = 539
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/314 (41%), Positives = 177/314 (56%), Gaps = 11/314 (3%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRD- 65
++++ +L + +I+ NGG PLT+ F V+ + P V +V P+
Sbjct: 133 ERVSHTLWNPHDVIKTNGGIPPLTFEMFVHTVSVIGPPPRPVEDVEWSVVNFGVLPMSSI 192
Query: 66 --DHDEKYGVPTLEELGFDIE-GLLPPT--WKGGETEAMRRLERHL--ERKAWVASFGRP 118
D PT E+ G E G + W GGE++A+R L+ L E A+ + P
Sbjct: 193 PSDIKVFKNFPTPEDFGISSEVGNMNRIIQWIGGESQALRHLQERLKVEENAFREGYCLP 252
Query: 119 KMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYC 178
LL T S LRFGCLS R FY + +Y I P ++ QL+WRE+FY
Sbjct: 253 NQARPDLLGPPTSQSAALRFGCLSVRKFYWSIQDMYSSICGPSPNQNITSQLIWREYFYT 312
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEA-LAKWANAQTGFPWIDAIMTQLREEGWIHHLA 237
+ N + M NPIC+ IPW + + KW +TG+P+IDAIM QL +EGWIHH+A
Sbjct: 313 MSVGNEYYAEMDRNPICLNIPWKNDYGSDFNKWKEGKTGYPFIDAIMRQLIQEGWIHHVA 372
Query: 238 RHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQF--FHCYCP 295
R+AVACFLTRGDLW+SWEEG+ F + LLDADWSV AG WMW+S S+F Q HC CP
Sbjct: 373 RNAVACFLTRGDLWISWEEGLNFFLQYLLDADWSVCAGNWMWVSSSAFEQLLDCSHCMCP 432
Query: 296 VKFGRKADPNGDFI 309
V +GR+ DP G +I
Sbjct: 433 VNYGRRLDPWGQYI 446
>gi|389622365|ref|XP_003708836.1| cryptochrome-1 [Magnaporthe oryzae 70-15]
gi|351648365|gb|EHA56224.1| cryptochrome-1 [Magnaporthe oryzae 70-15]
gi|440473506|gb|ELQ42297.1| cryptochrome-1 [Magnaporthe oryzae Y34]
gi|440489726|gb|ELQ69353.1| cryptochrome-1 [Magnaporthe oryzae P131]
Length = 679
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 141/361 (39%), Positives = 196/361 (54%), Gaps = 69/361 (19%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDS-----------PSPAEAPVT-----PLL 55
+L S I++ NGG+ ++ + +++ AK+ S P P E P+ P +
Sbjct: 135 TLWDSDAIVKANGGEPTMSMARLRTVGAKVGSIPRPIPAPKALPDPGEMPLDFNLDLPDV 194
Query: 56 VRQATTPLRDDHDEK-----------YGVPTLEELGFDIEGLLPPT---WKGGETEAMRR 101
+ R + EK + + TLEELG+ PP +KGGE+ A+R
Sbjct: 195 GQDYNAKWRSEGKEKAYGAIAGPNGDFAIETLEELGY------PPATTPYKGGESLALRE 248
Query: 102 LERHLERKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFYH---DLNKLYKRI 157
L+ +E + + A+F +P+ +P + S T LSP + FG LS RLFYH D Y +
Sbjct: 249 LDAIIENQVYTATFRKPQTSPAAFEPQSTTLLSPAMHFGSLSVRLFYHRVQDTVDAYNQA 308
Query: 158 KK---APPPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPW------------- 200
KK + PP SL GQLL+R+ ++ A A P F + GN C IPW
Sbjct: 309 KKKGASLPPESLTGQLLFRDMYFAAQAAIGPCFSQTAGNAHCRFIPWHLPSHVEDNAVSG 368
Query: 201 --------DVNMEA----LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+V+ E +W QTGFPWIDA+M QLR EGWIHHL RH+VACFLTRG
Sbjct: 369 QVLRKFEYEVDSEQAESWFRRWEAGQTGFPWIDALMRQLRVEGWIHHLGRHSVACFLTRG 428
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
+VSWE G+ +F+ELLLD + + NAG W WLSC++FF Q+F CY P+ FG+K DP+G F
Sbjct: 429 GCYVSWERGLDVFEELLLDHEPACNAGNWQWLSCTAFFSQYFRCYSPISFGKKWDPDGTF 488
Query: 309 I 309
I
Sbjct: 489 I 489
>gi|31322270|gb|AAP22941.1| cryptochrome 2 [Arvicanthis ansorgei]
Length = 139
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 104/124 (83%), Positives = 115/124 (92%)
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
FDRM GNPIC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFL
Sbjct: 2 FDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFL 61
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
TRGDLWVSWE G+++FDELLLDAD+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+
Sbjct: 62 TRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPS 121
Query: 306 GDFI 309
GD+I
Sbjct: 122 GDYI 125
>gi|389748358|gb|EIM89535.1| DNA photolyase [Stereum hirsutum FP-91666 SS1]
Length = 629
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 194/336 (57%), Gaps = 33/336 (9%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSP-SPAEAPVTPLLVRQATTPL 63
+ K + +L + ++EKNGG+ +T + I AK+ +P SP P + T +
Sbjct: 128 VVKAVGRTLWDPKEVVEKNGGQATMTLNALMKITAKLATPASPLPTPTSLPNPGNFTLSV 187
Query: 64 RDDH-----DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRP 118
++ +++ +PTL ELG + P +GGE+ A++ L+ L K ++A+F +P
Sbjct: 188 ANEQPPGSLSDEFSIPTLAELGIPASAVTTPH-RGGESLALKNLQTLLSDKTYIATFEKP 246
Query: 119 KMTPQSLL-ASQTGLSPFLRFGCLSTRLFYHDLNKL---YKRIKKAP-PPLSLHGQLLWR 173
K P + A+ T LSP L FG LS R F+ ++ ++ Y +KA PP +L GQL +R
Sbjct: 247 KTAPTAFEPAATTILSPHLHFGSLSVRKFHFEVQRIIAEYSESRKASTPPANLPGQLYFR 306
Query: 174 EFFYCA--ATRNPNFDRMLGNPICVQIPWDVNMEA------------------LAKWANA 213
E ++CA A +P F ++ GN + IPW + +WA
Sbjct: 307 EMYFCAQYAIGHP-FSQIAGNSVARYIPWHLPSTIPYSPTTPYTIDSPLAHRWFFRWAWG 365
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
TGFP++DA+M QLR+EGWIHHL RH VACFLTRG ++SWE G +IF+ELL+D + + N
Sbjct: 366 ITGFPFVDALMRQLRQEGWIHHLGRHMVACFLTRGGAYISWERGAEIFEELLIDHEPASN 425
Query: 274 AGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
AG WMWLSC++FF Q++ CY PV FG+K DP G F+
Sbjct: 426 AGNWMWLSCTAFFSQYYRCYSPVAFGKKWDPQGIFV 461
>gi|398412077|ref|XP_003857369.1| hypothetical protein MYCGRDRAFT_66122 [Zymoseptoria tritici IPO323]
gi|339477254|gb|EGP92345.1| hypothetical protein MYCGRDRAFT_66122 [Zymoseptoria tritici IPO323]
Length = 670
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 191/357 (53%), Gaps = 58/357 (16%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKM-------DSPSPAEAPVTPLLVRQAT 60
K +L S I++KNG K +T Q ++ K+ D+P P L + T
Sbjct: 131 KFGRTLWDSDEIVKKNGNKPTMTIKQLEAAGDKIGEVEKPIDAPKKIPDPGDMSLDFEQT 190
Query: 61 TP---------LRDDHDEKYG-----------VPTLEELGFDIEGLLPPTWKGGETEAMR 100
P R+ D YG VP+LEELG + +GGET ++
Sbjct: 191 QPKTKPDFNEKFREGEDGSYGSGVAGPKGDFAVPSLEELGMPV---ATTQHRGGETIGLK 247
Query: 101 RLERHLERKAWVASFGRPKMTPQSLLASQTGL-SPFLRFGCLSTRLFYHDLNKLYKRIKK 159
+LE L+ + + +F +PK +P + T L SP+L FG LS R FYH + + ++ KK
Sbjct: 248 QLEGILKDEDYTGTFEKPKTSPAAFEPQSTFLTSPYLHFGALSVRYFYHRVQDIIEKRKK 307
Query: 160 A-----PPPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPW----DVNM----- 204
+ PP SL GQLL+R+ ++ A A+ +F + NP C IPW VN
Sbjct: 308 SKQPTSSPPESLIGQLLFRDMYFGAQASLGWSFGQTYNNPHCRFIPWHLPSKVNTASRLI 367
Query: 205 ------------EALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
E +W+N TGFPWIDAIM QLR+EGWIHHLARH+VACFLTRG ++
Sbjct: 368 TGEYEVDSPEADEWFKRWSNGTTGFPWIDAIMRQLRQEGWIHHLARHSVACFLTRGGCYI 427
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
SWE G ++F+ELL+D + + N G W WLSC++FF QF+ CY PV FG+K D G +I
Sbjct: 428 SWERGAEVFEELLIDHEAACNIGNWQWLSCTAFFAQFYRCYSPVAFGKKWDDEGAYI 484
>gi|301097563|ref|XP_002897876.1| cryptochrome, putative [Phytophthora infestans T30-4]
gi|262106624|gb|EEY64676.1| cryptochrome, putative [Phytophthora infestans T30-4]
Length = 656
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/328 (39%), Positives = 178/328 (54%), Gaps = 38/328 (11%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDS-----------PSPAEAP--VTPLLVRQATTPLRD 65
+I N G+ P TY F +A P+P P + ++ L+
Sbjct: 233 VIAGNNGEPPKTYTAFLRALAMQPKPPKPLPTPEKVPAPVYLPSELYQQVIDYWQNRLKP 292
Query: 66 DH----DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMT 121
D ++++ +P + + GF + P GGE A+ L + + V F +PK +
Sbjct: 293 DSIAGPEQQFTLPEVTDFGF-VAPERHPFIYGGEQIALGILRDYCRNEGRVVKFEKPKTS 351
Query: 122 PQSLL--ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA--PPPLSLHGQLLWREFFY 177
P AS T LSP+L FG +S R F H + + + KA P+SL GQLLWREFF+
Sbjct: 352 PAQTTPSASTTSLSPYLYFGSISPRTFLHHVRGIQEHHAKALSATPVSLDGQLLWREFFH 411
Query: 178 CAATRNPNFDRMLGNPICVQIPWD-----------VNMEALAK-----WANAQTGFPWID 221
C N FD+M +P C+QI W + + LA+ W + QTGFPWID
Sbjct: 412 CHGRANAYFDKMEESPTCLQIDWRWHTIPEREEDMTDDDKLARSQFQAWIDGQTGFPWID 471
Query: 222 AIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS 281
AIM QL+EEGW+HHLARH+VACFLTRGDL++SW G+++F E L+D DWS+N G W+WLS
Sbjct: 472 AIMIQLKEEGWMHHLARHSVACFLTRGDLYISWVRGLEVFQERLIDHDWSINCGNWLWLS 531
Query: 282 CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
S FF +F Y P FG+K DP G FI
Sbjct: 532 ASYFFSAYFRVYSPSTFGKKWDPEGLFI 559
>gi|389622363|ref|XP_003708835.1| cryptochrome-1, variant [Magnaporthe oryzae 70-15]
gi|351648364|gb|EHA56223.1| cryptochrome-1, variant [Magnaporthe oryzae 70-15]
Length = 528
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 124/275 (45%), Positives = 164/275 (59%), Gaps = 42/275 (15%)
Query: 71 YGVPTLEELGFDIEGLLPPT---WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL- 126
+ + TLEELG+ PP +KGGE+ A+R L+ +E + + A+F +P+ +P +
Sbjct: 70 FAIETLEELGY------PPATTPYKGGESLALRELDAIIENQVYTATFRKPQTSPAAFEP 123
Query: 127 ASQTGLSPFLRFGCLSTRLFYH---DLNKLYKRIKK---APPPLSLHGQLLWREFFYCA- 179
S T LSP + FG LS RLFYH D Y + KK + PP SL GQLL+R+ ++ A
Sbjct: 124 QSTTLLSPAMHFGSLSVRLFYHRVQDTVDAYNQAKKKGASLPPESLTGQLLFRDMYFAAQ 183
Query: 180 ATRNPNFDRMLGNPICVQIPW---------------------DVNMEA----LAKWANAQ 214
A P F + GN C IPW +V+ E +W Q
Sbjct: 184 AAIGPCFSQTAGNAHCRFIPWHLPSHVEDNAVSGQVLRKFEYEVDSEQAESWFRRWEAGQ 243
Query: 215 TGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNA 274
TGFPWIDA+M QLR EGWIHHL RH+VACFLTRG +VSWE G+ +F+ELLLD + + NA
Sbjct: 244 TGFPWIDALMRQLRVEGWIHHLGRHSVACFLTRGGCYVSWERGLDVFEELLLDHEPACNA 303
Query: 275 GMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W WLSC++FF Q+F CY P+ FG+K DP+G FI
Sbjct: 304 GNWQWLSCTAFFSQYFRCYSPISFGKKWDPDGTFI 338
>gi|452989588|gb|EME89343.1| hypothetical protein MYCFIDRAFT_201892 [Pseudocercospora fijiensis
CIRAD86]
Length = 655
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 134/346 (38%), Positives = 189/346 (54%), Gaps = 58/346 (16%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKM-DSPSPAEAPVT-------PLLVRQATTPLRDDHDE- 69
I++ NGGK ++ Q Q AK+ D P +AP + L + Q D +E
Sbjct: 142 IVKANGGKPTMSISQLQQAGAKIGDIEQPIDAPKSLPDPGDMTLKIEQTKPDPNPDFNES 201
Query: 70 ------------------KYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAW 111
K+ PTL ELG ++ P KGGE+ + LE L + +
Sbjct: 202 HRESDDATFDSGIAGPSGKFDPPTLAELG--MKAATSPH-KGGESVVLHSLENILADEDY 258
Query: 112 VASFGRPKMTPQSLLASQTGL-SPFLRFGCLSTRLFYHDLNKLYKRIKK-----APPPLS 165
A+F +PK +P + T L SP+L FG LS R FYH + ++ +R KK + PP S
Sbjct: 259 AATFQKPKTSPAAFEPQSTFLTSPYLHFGALSCRYFYHRVAEIVERRKKEKKPTSSPPES 318
Query: 166 LHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDV--NMEALAK------------- 209
L GQLL+R+ ++ A A+ +F + N C +PW + ++ L+K
Sbjct: 319 LAGQLLFRDMYFAAQASLGWSFGQTYNNSHCRFVPWHLPSKVDILSKRTTGAYEIDDEEK 378
Query: 210 ------WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
W + TGFPWIDAIM QLR EGWIHHLARH+VACFLTRG ++SWE G ++F+E
Sbjct: 379 EIWFQRWRSGTTGFPWIDAIMRQLRAEGWIHHLARHSVACFLTRGGCYISWERGAEVFEE 438
Query: 264 LLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LL+D + + N G W WLSC++FF QF+ CY P+ FG+K DP+GDF+
Sbjct: 439 LLIDHEAACNIGNWQWLSCTAFFAQFYRCYSPIAFGKKWDPDGDFV 484
>gi|402076336|gb|EJT71759.1| cryptochrome-1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 661
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 189/356 (53%), Gaps = 61/356 (17%)
Query: 15 SSRRIIEKNGGKTPLTYHQFQSIVAKMDS-----------PSPAEAPV---TPLLVRQAT 60
S R++ NGG+ ++ Q + AK+ P P E PV L +A+
Sbjct: 138 DSDRVVIANGGEPTMSITQLRVAGAKVGPIPLPIAAPTTLPDPGEMPVDFEVHLPNAEAS 197
Query: 61 TPLR-----DDHDEKYGVPTLEELG-----FDIEGL----LPPT---WKGGETEAMRRLE 103
+ + D YG ++ E+ F +E L PP KGGET A++RL+
Sbjct: 198 IDINSKWRSEGKDTTYGKGSVGEIAGPNGDFAVETLAELGYPPATTPHKGGETLALQRLD 257
Query: 104 RHLERKAWVASFGRPKMTPQSLLA-SQTGLSPFLRFGCLSTRLFYH---DLNKLYKRIKK 159
+ + + A+F +P+ +P S T LSPFL FG LS RLFYH D Y + +K
Sbjct: 258 ELMADQEYTATFRKPQSSPADFDPPSTTLLSPFLHFGALSVRLFYHRVQDAVDAYVKSRK 317
Query: 160 ---APPPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPW--------------- 200
+ PP SL GQLL+R+ ++ A A F + GNP C IPW
Sbjct: 318 KGASQPPESLTGQLLFRDMYFAAQAAIGDVFGQTAGNPRCRFIPWHLPSRLEGDAGPLRS 377
Query: 201 ---DVNMEA----LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
DV+ +W +TGFPWIDA+M QLR EGWIHHL RH+VACFLTRG +VS
Sbjct: 378 FAYDVDSAQAEDWFRRWEAGRTGFPWIDALMRQLRVEGWIHHLGRHSVACFLTRGGCYVS 437
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE G+ +F+ELLLD + S NAG W WLSC++FF Q+F CY PV FGRK DP G F+
Sbjct: 438 WERGLDVFEELLLDHEPSCNAGNWQWLSCTAFFSQYFRCYSPVSFGRKWDPEGTFV 493
>gi|324103935|gb|ADY17887.1| cryptochrome [Spodoptera exigua]
gi|324103937|gb|ADY17888.1| cryptochrome [Spodoptera exigua]
Length = 548
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 177/310 (57%), Gaps = 24/310 (7%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTP--LRDDHDEKYGVPTL 76
+I+ NGG PLTY F VA + P V V+ + P ++ P
Sbjct: 139 VIKANGGIPPLTYQMFLHTVATIGDPPRPVGEVDFTGVKFGSLPESFYNEFTVFDKTPKP 198
Query: 77 EELG--FDIEGLLPPTWKGGETEAMRRLERHLE-------RKAWVASFGRPKMTPQSLLA 127
E+LG + E + W GGET A++++++ L R +++ + G P LL
Sbjct: 199 EDLGVFLETEDIRMIRWVGGETTALKQMQQRLTVEYETFLRGSYLPTHGNP-----DLLG 253
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-----LHGQLLWREFFYCAATR 182
LSP LRFGCLS R FY + L++++ + + + GQL+WRE+FY +
Sbjct: 254 PPISLSPALRFGCLSVRSFYWSVQDLFRQVHQGRLTSNSASHFITGQLIWREYFYTMSVN 313
Query: 183 NPNFDRMLGNPICVQIPWDV-NMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
NPN+ +M GNPIC+ IPW + + L +W +TGFP++DA M QLR EGW+HH AR+ V
Sbjct: 314 NPNYGQMAGNPICLDIPWKTPSGDELQRWMEGRTGFPFVDAAMRQLRTEGWLHHAARNTV 373
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF--FQQFFHCYCPVKFG 299
A FLTRG LW+SWE G+ F + LLDADWSV AG WMW+S S+F C CPV+ G
Sbjct: 374 ASFLTRGTLWLSWEHGLNHFLKYLLDADWSVCAGNWMWVSSSAFEALLDSGECACPVRLG 433
Query: 300 RKADPNGDFI 309
++ DP+G+++
Sbjct: 434 QRLDPSGEYV 443
>gi|62955979|gb|AAY23345.1| antennal cryptochrome [Mamestra brassicae]
Length = 548
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 177/310 (57%), Gaps = 24/310 (7%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKY--GVPTL 76
+I+ NGG PLTY F VA + P + + V+ + P H+ P
Sbjct: 139 VIKANGGIPPLTYQMFLHTVATIGDPPRPVSDIDFTGVKFGSLPESFYHEFTVYDKTPKP 198
Query: 77 EELG--FDIEGLLPPTWKGGETEAMRRLERHLE-------RKAWVASFGRPKMTPQSLLA 127
E+LG + E + W GGET A++++++ L R +++ + G P LL
Sbjct: 199 EDLGVFLENEDIRMIRWVGGETTALKQMQQRLAVEYETFLRGSYLPTHGNP-----DLLG 253
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-----LHGQLLWREFFYCAATR 182
LSP LRFGCLS R FY + L++++ + + GQL+WRE+FY +
Sbjct: 254 PPISLSPALRFGCLSVRSFYWSVQDLFRQVHQGRLATQSASHFITGQLIWREYFYTMSVN 313
Query: 183 NPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
NPN+ +M GNPIC+ IPW + + L +W +TGFP++DA M QLR EGW+HH AR+ V
Sbjct: 314 NPNYGQMAGNPICLDIPWKEPEGDELQRWVEGRTGFPFVDAAMRQLRTEGWLHHAARNTV 373
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF--FQQFFHCYCPVKFG 299
A FLTRG LW+SWE G+ F + LLDADWSV AG WMW+S S+F C CPV+ G
Sbjct: 374 ASFLTRGTLWLSWEHGLNHFLKYLLDADWSVCAGNWMWVSSSAFEALLDSGECACPVRLG 433
Query: 300 RKADPNGDFI 309
++ DP+G+++
Sbjct: 434 QRLDPSGEYV 443
>gi|404313303|gb|AFR54426.1| cryptochrome 1 [Mythimna separata]
Length = 528
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 176/310 (56%), Gaps = 24/310 (7%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTP--LRDDHDEKYGVPTL 76
+I+ NGG PLTY F VA + P + V V+ + P + P
Sbjct: 139 VIKANGGIPPLTYQMFLHTVATIGDPPRPVSNVDFTGVKFGSLPECFYQEFTVFDKTPKP 198
Query: 77 EELG--FDIEGLLPPTWKGGETEAMRRLERHLE-------RKAWVASFGRPKMTPQSLLA 127
E+LG + E + W GGET A++++++ L R +++ + G P LL
Sbjct: 199 EDLGVFLENEDIRMIRWVGGETTALKQMQQRLAVEYETFLRGSYLPTHGNP-----DLLG 253
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA-----PPPLSLHGQLLWREFFYCAATR 182
LSP LRFGCLS R FY L L++++ + + GQL+WRE+FY +
Sbjct: 254 PPISLSPALRFGCLSVRSFYWALQDLFRQVHQGRLATQSASHVIAGQLIWREYFYTMSVN 313
Query: 183 NPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
NPN+ +M GNPIC+ IPW + + L +W +TGFP++DA M QLR EGW+HH AR+ V
Sbjct: 314 NPNYGQMAGNPICLDIPWKEPQGDELQRWVEGRTGFPFVDAAMRQLRTEGWLHHAARNTV 373
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF--FQQFFHCYCPVKFG 299
A FLTRG LW+SWE G+ F + LLDADWSV AG WMW+S S+F C CPV+ G
Sbjct: 374 ASFLTRGTLWLSWEHGLNHFLKYLLDADWSVCAGNWMWVSSSAFEALLDSGECACPVRLG 433
Query: 300 RKADPNGDFI 309
++ DP+G+++
Sbjct: 434 QRLDPSGEYV 443
>gi|342883710|gb|EGU84160.1| hypothetical protein FOXB_05337 [Fusarium oxysporum Fo5176]
Length = 637
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 186/352 (52%), Gaps = 60/352 (17%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDS-----------PSPAEAPVTPLLVRQAT 60
+L S +I+EK+GGK ++ Q Q+ +K+ P P + PV +T
Sbjct: 135 TLWDSDQIVEKHGGKPTMSITQLQTAGSKLGEIRKPIPAPKHLPDPGDMPVNFEQDEPST 194
Query: 61 TP-----LRDDHDEKY----------GVPTLEELGFDIEGLLPPT---WKGGETEAMRRL 102
P R + D+ Y + T+EELGF PP +GGET A++ L
Sbjct: 195 KPDFNAGFRTEGDKAYTRIAGPNDDFAIETMEELGF------PPATTPHRGGETRALKEL 248
Query: 103 ERHLERKAWVASFGRPKMTPQSLLASQTGL-SPFLRFGCLSTRLFYHDLNKLYKRIKK-- 159
+ + K + A+F +PK P T L SPFL FG LS RLFY + ++ K
Sbjct: 249 NKLIADKKYTATFQKPKTNPAQFEPQATTLLSPFLHFGALSVRLFYWRVREIVDSYGKGA 308
Query: 160 APPPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDV---------------- 202
+ PP SL GQLL+R+ ++ A A F + NP C IPW +
Sbjct: 309 STPPESLIGQLLFRDMYFAAQAALGYVFSQTANNPYCRFIPWHLPSKRDSETGLITGEYH 368
Query: 203 --NMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
+ EA +W TGFPWIDA+M QL++EGWIHHL RHAVACFLTRG ++ WE G
Sbjct: 369 IDSEEAEIWFRRWRVGMTGFPWIDALMRQLKDEGWIHHLGRHAVACFLTRGGCYIDWERG 428
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++F+E L+D + + NAG W WLSC++FF Q+F CY P+ FG+K D G+FI
Sbjct: 429 CEVFEEWLIDHEPACNAGNWQWLSCTAFFSQYFRCYSPIAFGQKWDKEGNFI 480
>gi|371574660|gb|AEX49898.1| cryptochrome 1 [Helicoverpa armigera]
Length = 528
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 176/310 (56%), Gaps = 24/310 (7%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTP--LRDDHDEKYGVPTL 76
+I+ NGG PLTY F VA + P + V+ + P + P
Sbjct: 139 VIKANGGIPPLTYQMFLHTVATIGDPPRPVPNIDFTGVKFGSLPECFYQEFTVYDKTPKP 198
Query: 77 EELG--FDIEGLLPPTWKGGETEAMRRLERHLE-------RKAWVASFGRPKMTPQSLLA 127
E+LG + E + W GGET A++++++ L R +++ + G P LL
Sbjct: 199 EDLGVFLENEDIRMIRWVGGETTALKQMQQRLSVEYETFLRGSYLPTHGNP-----DLLG 253
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-----LHGQLLWREFFYCAATR 182
LSP LRFGCLS R FY + L++++ + + + GQL+WRE+FY +
Sbjct: 254 PPISLSPALRFGCLSVRSFYWAVQDLFRQVHQGRLTTNSASHFITGQLIWREYFYTMSVN 313
Query: 183 NPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
NPN+ +M GNPIC+ IPW + + L +W +TGFP++DA M QLR EGW+HH AR+ V
Sbjct: 314 NPNYGQMAGNPICLDIPWKNPEGDELQRWVEGRTGFPFVDAAMRQLRTEGWLHHAARNTV 373
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF--FQQFFHCYCPVKFG 299
A FLTRG LW+SWE G+ F + LLDADWSV AG WMW+S S+F C CPV+ G
Sbjct: 374 ASFLTRGTLWLSWEHGLNHFLKYLLDADWSVCAGNWMWVSSSAFEALLDSGECACPVRLG 433
Query: 300 RKADPNGDFI 309
++ DP+G+++
Sbjct: 434 QRLDPSGEYV 443
>gi|307826658|gb|ADN94464.1| cryptochrome [Helicoverpa armigera]
Length = 548
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 176/310 (56%), Gaps = 24/310 (7%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTP--LRDDHDEKYGVPTL 76
+I+ NGG PLTY F VA + P + V+ + P + P
Sbjct: 139 VIKANGGIPPLTYQMFLHTVATIGDPPRPVPNIDFTGVKFGSLPECFYQEFTVYDKTPKP 198
Query: 77 EELG--FDIEGLLPPTWKGGETEAMRRLERHLE-------RKAWVASFGRPKMTPQSLLA 127
E+LG + E + W GGET A++++++ L R +++ + G P LL
Sbjct: 199 EDLGVFLENEDIRMIRWVGGETTALKQMQQRLSVEYETFLRGSYLPTHGNP-----DLLG 253
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-----LHGQLLWREFFYCAATR 182
LSP LRFGCLS R FY + L++++ + + + GQL+WRE+FY +
Sbjct: 254 PPISLSPALRFGCLSVRSFYWAVQDLFRQVHQGRLTTNSASHFITGQLIWREYFYTMSVN 313
Query: 183 NPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
NPN+ +M GNPIC+ IPW + + L +W +TGFP++DA M QLR EGW+HH AR+ V
Sbjct: 314 NPNYGQMAGNPICLDIPWKNPEGDELQRWVEGRTGFPFVDAAMRQLRTEGWLHHAARNTV 373
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF--FQQFFHCYCPVKFG 299
A FLTRG LW+SWE G+ F + LLDADWSV AG WMW+S S+F C CPV+ G
Sbjct: 374 ASFLTRGTLWLSWEHGLNHFLKYLLDADWSVCAGNWMWVSSSAFEALLDSGECACPVRLG 433
Query: 300 RKADPNGDFI 309
++ DP+G+++
Sbjct: 434 QRLDPSGEYV 443
>gi|307611923|ref|NP_001182628.1| cryptochrome 1 [Bombyx mori]
gi|306416108|gb|ADM86932.1| cryptochrome 1 [Bombyx mori]
gi|306416112|gb|ADM86934.1| cryptochrome 1 [Bombyx mori]
Length = 536
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 175/307 (57%), Gaps = 21/307 (6%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL--RDDHDEKYGVPTL 76
+I+ NGG PLTY F VA + P ++ T PL ++ VP
Sbjct: 139 VIKANGGIPPLTYQMFLHTVATIGDPPRPVDNAKLRGIKFGTLPLCFYEEFTVYDKVPNP 198
Query: 77 EELG--FDIEGLLPPTWKGGETEAMRRLERHLE-------RKAWVASFGRPKMTPQSLLA 127
E+LG + E + W GGET A+++++ L R +++ + G P LL
Sbjct: 199 EDLGVFLENEDIRMIRWVGGETAALKQMQHRLAVEYETFCRGSYLPTHGSP-----DLLG 253
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAP--PPLSLHGQLLWREFFYCAATRNPN 185
LSP LRFGCLS R FY L L++++ + + GQL+WRE+FY + NP+
Sbjct: 254 PPISLSPALRFGCLSVRKFYWSLQDLFQQVHQGSLCSTQYITGQLIWREYFYTMSVNNPH 313
Query: 186 FDRMLGNPICVQIPWDV-NMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ +M NPIC+ IPW + L +WA+ +TGFP++DA M QLR EGW+HH R+ VA F
Sbjct: 314 YGQMTDNPICLDIPWKSPEGDELERWASGRTGFPFVDAAMRQLRLEGWLHHAVRNTVASF 373
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF--FQQFFHCYCPVKFGRKA 302
LTRG LW+SWE G+ F + LLDADWSV AG WMW+S S+F C CPV+ G++
Sbjct: 374 LTRGTLWLSWEHGLAHFLKYLLDADWSVCAGNWMWVSSSAFEALLDSGECACPVRLGQRL 433
Query: 303 DPNGDFI 309
DP+G+++
Sbjct: 434 DPSGEYV 440
>gi|453088843|gb|EMF16883.1| FAD_binding_7-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 637
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 189/359 (52%), Gaps = 62/359 (17%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKM-DSPSPAEAPVT-------PLLVRQ- 58
K+ +L +++ NGGK ++ Q Q AK+ D P E P + L + Q
Sbjct: 131 KVGRTLYDPDALVKANGGKPTMSMTQLQHAGAKIGDIEQPVETPTSLPDPGDMTLDIEQE 190
Query: 59 ---ATTPLRDDHDEKYGV---------------PTLEELGFDIEGLLPPT--WKGGETEA 98
A + H EK V PTLEELG + P T KGGET
Sbjct: 191 EPEAVPDINAKHREKDAVTFSSGIAGPKGDFSPPTLEELG-----MAPATSPHKGGETVI 245
Query: 99 MRRLERHLERKAWVASFGRPKMTPQSLLASQTGL-SPFLRFGCLSTRLFYHDLNKLYKRI 157
+ LE+ L+ + + ++F +PK +P + T L SP+L FG LS R FYH + ++ ++
Sbjct: 246 LEALEKILQDEEYTSTFEKPKTSPAAFEPQSTFLTSPYLHFGALSCRYFYHRVAEIVEKR 305
Query: 158 KK-----APPPLSLHGQLLWREFFYCAATRNP-NFDRMLGNPICVQIPW----DVNMEA- 206
KK + PP SL GQLL+R+ ++ A + + LGN C IPW V+M+
Sbjct: 306 KKEKKPTSAPPESLTGQLLFRDMYFAAQAHGGWQYGQTLGNAHCRFIPWHLPSKVDMDTK 365
Query: 207 ----------------LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
+W+ TGFPWIDA M LR GWIHHLARH+VACFLTRG
Sbjct: 366 RITAEHEIDDEEKEEWFQRWSQGTTGFPWIDAHMRALRSTGWIHHLARHSVACFLTRGGC 425
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++SWE G ++F+ELL+D + + N G W WLSC++FF QFF CY P+ FG+K D NG +I
Sbjct: 426 YISWERGAEVFEELLIDHEAACNIGNWQWLSCTAFFSQFFRCYSPIAFGKKWDANGLYI 484
>gi|302915963|ref|XP_003051792.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732731|gb|EEU46079.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 639
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 184/349 (52%), Gaps = 54/349 (15%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDS-----------PSPAEAPVTPLLVRQAT 60
+L S +I+EK+GGK ++ Q Q A++ P P E PV + T
Sbjct: 135 TLWDSDQIVEKHGGKPTMSITQLQQAGARLGEVRKPIPAPKHLPDPGEMPVDFEQEQPKT 194
Query: 61 TP-----LRDDHDEKY----------GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERH 105
P R + D+ Y + T+EELGF P +GGET A+ L++
Sbjct: 195 KPDFNSEQRTEKDQTYTKIAGPNGDFAIETMEELGFP-SATTPH--RGGETLALEALDKI 251
Query: 106 LERKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK--APP 162
+ K + A F +PK +P S T LSPFL FG LS R FY + ++ K + P
Sbjct: 252 IADKKYTAKFEKPKTSPARFEPQSTTLLSPFLHFGALSVREFYWRVQEVVDAYGKGASTP 311
Query: 163 PLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWD-----------------VNM 204
P SL GQLL+R+ ++ A A F + + NP C IPW V+
Sbjct: 312 PESLIGQLLFRDMYFAAQAALGDVFMQTVKNPHCRFIPWHLPSKRDPKTGLVTGEYHVDS 371
Query: 205 EA----LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKI 260
E +W TGFPWIDA+M QL+EEGWIHHL RHAVACFLTRG ++ WE G ++
Sbjct: 372 EEADIWFKRWKTGMTGFPWIDALMRQLKEEGWIHHLGRHAVACFLTRGGCYIDWERGCEV 431
Query: 261 FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F+E L+D + + NAG W WLSC++FF Q+F CY PV FG+K D GDFI
Sbjct: 432 FEEWLIDHEPACNAGNWQWLSCTAFFSQYFRCYSPVSFGQKWDKQGDFI 480
>gi|449304579|gb|EMD00586.1| hypothetical protein BAUCODRAFT_175264 [Baudoinia compniacensis
UAMH 10762]
Length = 647
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 185/350 (52%), Gaps = 58/350 (16%)
Query: 15 SSRRIIEKNGGKTPLTYHQFQSIVAKM-DSPSPAEAPV-------TPLLVRQATTPLRDD 66
S I++ + GK ++ Q QS +K+ D P E P T L ++Q D
Sbjct: 138 DSDDIVKAHNGKPTMSISQLQSAGSKVGDIALPIEPPKSIPNPGDTNLDIKQERPSSEPD 197
Query: 67 HDEKY-------------------GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLE 107
+E+Y VPTL+ELG ++ P +GGE+ + +L L
Sbjct: 198 INEQYRDADEGSYSFGIAGPNGDYSVPTLKELG--LKAATTPH-RGGESVVLGKLHIILA 254
Query: 108 RKAWVASFGRPKMTPQSLLASQTGL-SPFLRFGCLSTRLFYHDLNKLYKRIKKAP----- 161
+ + +F +PK +P + T L SP+L FG LS R FYH + ++ +R +KA
Sbjct: 255 DEDYTGTFEKPKTSPAAFEPQATCLTSPYLHFGALSCRYFYHRIEEIVERRRKAKRPVSE 314
Query: 162 PPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPW-------------------- 200
PP SL GQLL+R+ ++ A A +F + N C IPW
Sbjct: 315 PPTSLTGQLLFRDMYFAAQAALGYSFGQTYNNDHCRFIPWHLPSRIDVSTKLITGDYEVD 374
Query: 201 -DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
+V +W +TGFPWIDAIM QL+ EGWIHHLARHAVACFLTRG ++SWE G +
Sbjct: 375 DEVKQREFIRWREGKTGFPWIDAIMRQLKYEGWIHHLARHAVACFLTRGGCYISWERGAE 434
Query: 260 IFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+F+E L+D + + N G W WLSC++F+ QF+ CY P+ FGRK D NGDFI
Sbjct: 435 VFEEWLIDHEAACNIGNWQWLSCTAFYSQFYRCYSPIAFGRKWDDNGDFI 484
>gi|302745158|gb|ADL62682.1| cryptochrome 2b, partial [Phreatichthys andruzzii]
Length = 180
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 110/119 (92%)
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
GNPIC++IPWD N EALAKWA A+TGFPWIDAIMTQLR+EGWIH+LAR+AV CFLTRGDL
Sbjct: 2 GNPICIRIPWDRNPEALAKWAEAKTGFPWIDAIMTQLRQEGWIHYLARNAVTCFLTRGDL 61
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W++WEEGMKIF+ELLLDADWSVNAG W+ SCSSFFQQFFHCYCPV FGR+ DPNGDFI
Sbjct: 62 WINWEEGMKIFEELLLDADWSVNAGSWLCHSCSSFFQQFFHCYCPVGFGRRIDPNGDFI 120
>gi|358055721|dbj|GAA98066.1| hypothetical protein E5Q_04748 [Mixia osmundae IAM 14324]
Length = 601
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 157/268 (58%), Gaps = 31/268 (11%)
Query: 68 DEKYGVPTLEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
D K+ VPT+EELG G+ P GGETEA++RLE +++ K + +F +PK P +
Sbjct: 220 DGKFSVPTMEELGMAKATGIHP----GGETEALKRLEAYMKDKEAIINFEKPKTNPGAFD 275
Query: 127 -ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
A+ T LSP+L+FG LS R FY L + K K PP+SL GQ LWREFF+ PN
Sbjct: 276 PAATTVLSPYLKFGALSVRTFYWRLQDVVKGTKHTQPPVSLIGQCLWREFFHYNMRVTPN 335
Query: 186 FDRMLGNPICVQIPW---------------------DVNMEA---LAKWANAQTGFPWID 221
+ + GNPIC I W D EA L W + QTGFPWID
Sbjct: 336 WHEIRGNPICKYIDWRLDDRYDDKGEPIPRSEWKLSDEEKEAEKVLEAWTHGQTGFPWID 395
Query: 222 AIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS 281
AIM QL+ GWIHHLARH+VACFLTRG ++SW G ++F+ L+D D ++N G WMWLS
Sbjct: 396 AIMRQLKMHGWIHHLARHSVACFLTRGHAYISWVRGKEVFERWLIDHDPAMNTGNWMWLS 455
Query: 282 CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
S+F+ Q+F Y + +G D +G I
Sbjct: 456 ASAFYSQWFRVYG-MAYGSNWDKSGALI 482
>gi|283476381|emb|CAY26038.1| chryptochrome 1 [Acyrthosiphon pisum]
Length = 553
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 187/321 (58%), Gaps = 20/321 (6%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVT--PLLVRQATTPLR 64
+ ++ +L + + IIEKNGG P T+ QFQ+ ++ P V ++ + ++
Sbjct: 125 ETVSHTLWNPKSIIEKNGGVPPFTFKQFQNTAKQIGHPPSPVGNVDWLSVIFEELPASIQ 184
Query: 65 DDHDEKYGVPTLEELGF--DIEGLLPPT--WKGGETEAMRRLERHLE--RKAWVASFGRP 118
D+ + PT E G ++ L T W GGET A+ +L+ LE ++A+V F P
Sbjct: 185 DEFKNLHN-PTPETFGIYPEVPENLTSTYRWYGGETRALEQLKERLEYEKEAFVNGFYLP 243
Query: 119 KMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLY--KRIKKAPPPLSLHGQLLWREFF 176
LL+ + LS LR+GCLS R FY +L KL+ K P S+ QL+WR++F
Sbjct: 244 NQVNPDLLSPPSSLSAALRYGCLSIRKFYWELTKLFINKFEGDLLPMYSVTSQLIWRDYF 303
Query: 177 YCAATRNPNFDRMLGNPICVQIPWD-----VNMEALAKWANAQTGFPWIDAIMTQLREEG 231
Y + N NF ++ NP C+ IPW+ N + L W +TG+P+IDA M QL +EG
Sbjct: 304 YTMSIDNKNFGQIEDNPACISIPWNDIKIPENKKMLECWKTGKTGYPFIDAGMRQLMQEG 363
Query: 232 WIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFH 291
WIHH+ R+++A FLTRGDLW+SW EG+ F + LLDAD+SV +G W+W+S SS F+Q
Sbjct: 364 WIHHVVRNSLASFLTRGDLWISWVEGLNHFMKYLLDADFSVCSGNWIWVS-SSTFEQLLD 422
Query: 292 ---CYCPVKFGRKADPNGDFI 309
C CPV +G + DP+G++I
Sbjct: 423 CPLCVCPVSYGLRLDPSGEYI 443
>gi|283806550|ref|NP_001164532.1| chryptochrome 1 [Acyrthosiphon pisum]
Length = 553
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 181/311 (58%), Gaps = 20/311 (6%)
Query: 17 RRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVT--PLLVRQATTPLRDDHDEKYGVP 74
+ IIEKNGG P T+ QFQ+ ++ P V ++ + ++D+ + P
Sbjct: 135 KSIIEKNGGVPPFTFKQFQNTAKQIGHPPSPVGNVDWLSVIFEELPASIQDEFKNLHN-P 193
Query: 75 TLEELGF--DIEGLLPPT--WKGGETEAMRRLERHLE--RKAWVASFGRPKMTPQSLLAS 128
T E G ++ L T W GGET A+ +L+ LE ++A+V F P LL+
Sbjct: 194 TPETFGIYPEVPENLTSTYRWYGGETRALEQLKERLEYEKEAFVNGFYLPNQVNPDLLSP 253
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLY--KRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
+ LS LR+GCLS R FY +L KL+ K P S+ QL+WR++FY + N NF
Sbjct: 254 PSSLSAALRYGCLSIRKFYWELTKLFINKFEGDLLPMYSVTSQLIWRDYFYTMSIDNKNF 313
Query: 187 DRMLGNPICVQIPWD-----VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
++ NP C+ IPW+ N + L W +TG+P+IDA M QL +EGWIHH+ R+++
Sbjct: 314 GQIEDNPACISIPWNDIKIPENKKMLECWKTGKTGYPFIDAGMRQLMQEGWIHHVVRNSL 373
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFH---CYCPVKF 298
A FLTRGDLW+SW EG+ F + LLDAD+SV +G W+W+S SS F+Q C CPV +
Sbjct: 374 ASFLTRGDLWISWVEGLNHFMKYLLDADFSVCSGNWIWVS-SSTFEQLLDCPLCVCPVSY 432
Query: 299 GRKADPNGDFI 309
G + DP+G++I
Sbjct: 433 GLRLDPSGEYI 443
>gi|397603437|gb|EJK58421.1| hypothetical protein THAOC_21454 [Thalassiosira oceanica]
Length = 564
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 147/227 (64%), Gaps = 9/227 (3%)
Query: 92 KGGETEAMRRLERHL-ERKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFYHD 149
GGE+ A+ RL++ + R W A + +PK + + S T LSP+L GC+S R +H
Sbjct: 243 NGGESYALDRLQKTITARPNWTAQYEKPKTSCTEVSDPSTTVLSPYLSIGCISPRTVWHA 302
Query: 150 LNKLYKRIK--KAPPPLSLHGQLLWREF----FYCAATRNP-NFDRMLGNPICVQIPWDV 202
+ K+ K + PP+SLHGQLLWR+F + A +++ ++ ++ N C IPW
Sbjct: 303 IETANKQAKTNRTQPPVSLHGQLLWRDFNNLMAHSANSQHAGSWGQIKNNAFCRDIPWSS 362
Query: 203 NMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFD 262
+ L+ W +TG+PWIDA M QLR EGWIHHL RHAVACFLTRGDLW SW EG F+
Sbjct: 363 DPNMLSSWKEGRTGYPWIDACMAQLRSEGWIHHLGRHAVACFLTRGDLWQSWVEGADHFE 422
Query: 263 ELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD+++N+ WMWLS S FF Q+F CY P++F +K DPNG++I
Sbjct: 423 AELLDADYALNSFNWMWLSASGFFYQYFRCYSPIQFQKKNDPNGNYI 469
>gi|346324524|gb|EGX94121.1| cryptochrome-2 [Cordyceps militaris CM01]
Length = 902
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/345 (39%), Positives = 177/345 (51%), Gaps = 54/345 (15%)
Query: 16 SRRIIEKNGGKTPLTYHQFQSIVAKMDS-----------PSPAEAPV-----TPLLVRQA 59
S I+ KN GK ++ Q QS K+ + P P E P+ P A
Sbjct: 139 SDAIVAKNNGKPTMSTTQLQSAGKKLGAIDRPIPAPSSLPDPGEMPLDFEHEQPTSKPDA 198
Query: 60 TTPLRDDHDEKY----------GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERK 109
+ R D +Y + T+EELGF P KGGET A++ L+ + K
Sbjct: 199 NSERRTKKDTEYRSIAGPKGDFSIETMEELGFP-SATTP--HKGGETRALKLLDDIAKDK 255
Query: 110 AWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAP--PPLSL 166
+ A+F +PK +P S T LSPFL FG LS R FY + + + K PP SL
Sbjct: 256 KYTATFEKPKTSPAQFEPQSTTLLSPFLHFGALSVREFYWRVQDIVDKYGKGASMPPASL 315
Query: 167 HGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPW----DVNMEA--------------- 206
GQL +R+ ++ A A P F + LGN C IPW V+ E
Sbjct: 316 TGQLFFRDMYFAAQAAIGPKFTQTLGNDHCRFIPWHLPSKVDEETGLSTGEYRVDSPEAE 375
Query: 207 --LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDEL 264
+W TGFPWIDA+M QLR +GWIHHL RH+VACFLTRG +V WE G ++F+E
Sbjct: 376 QWFQRWKVGMTGFPWIDALMRQLRHDGWIHHLGRHSVACFLTRGGCYVDWERGAEVFEEY 435
Query: 265 LLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LLD + + NAG W WLSC++FF Q+F Y PV F +K D NGDF+
Sbjct: 436 LLDHEPACNAGNWQWLSCTAFFSQYFRMYSPVSFPQKWDKNGDFV 480
>gi|321466446|gb|EFX77441.1| CRY-D [Daphnia pulex]
Length = 525
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 172/302 (56%), Gaps = 12/302 (3%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKM-DSPSPAEAPVTPLLVRQATTPLRDDHDEKYG-VPTL 76
II NGG PLTY F + + D P P P + P + +G VPTL
Sbjct: 135 IIASNGGTPPLTYEMFVHVAMSVGDPPKPVADPEWKGVKFLTLEPFESNRFTLFGGVPTL 194
Query: 77 EELGF--DIEGLLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPKMTPQSLLASQTGL 132
++G + G GGET A++ L E A+ + F +P LL L
Sbjct: 195 SQIGVPENPVGCRGRRIFGGETNALKHFAIRLQAEETAFRSGFYQPNQARPDLLGPPLSL 254
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPP--LSLHGQLLWREFFYCAATRNPNFDRML 190
S + G +S RLFY +++++ ++ + PP L + GQ++WR++FY + NP FD+ +
Sbjct: 255 SAAISVGAISVRLFYWRIHEIFDKVNRGNPPAWLGITGQIIWRDYFYAMSRMNPKFDKEV 314
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
NPIC+QIPW N E KW N QTG+P+IDA M QL +EGW+HH R+AVA FLTRGDL
Sbjct: 315 DNPICLQIPWVENEEFFEKWKNGQTGYPFIDAGMRQLNQEGWMHHSVRNAVAMFLTRGDL 374
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYC---PVKFGRKADPNGD 307
W++W+ G + L+D+DWSVN+G WMW+S SS F++ C V +G++ +P+GD
Sbjct: 375 WLNWDIGAEYMANQLVDSDWSVNSGNWMWVS-SSAFERLLDCSVCINSVLYGKRLEPSGD 433
Query: 308 FI 309
+I
Sbjct: 434 YI 435
>gi|46124775|ref|XP_386941.1| hypothetical protein FG06765.1 [Gibberella zeae PH-1]
Length = 685
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/351 (37%), Positives = 182/351 (51%), Gaps = 59/351 (16%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDS-----------PSPAEAPVT-----PLL 55
+L S +I+EK+GGK ++ Q Q+ +K+ P P + PV P
Sbjct: 187 TLWDSDQIVEKHGGKPTMSITQLQAAGSKLGQVKKPIPAPKNLPDPGDMPVNFDQDEPDT 246
Query: 56 VRQATTPLRDDHDEKY----------GVPTLEELGFDIEGLLPPT---WKGGETEAMRRL 102
+ +R + D+ Y + T+EELGF PP +GGET A++ L
Sbjct: 247 KPDFNSEIRTEGDKTYTKISGPKGDFAIETMEELGF------PPATTPHRGGETLALKAL 300
Query: 103 ERHLERKAWVASFGRPKMTPQSLLASQTGL-SPFLRFGCLSTRLFYHDLNKLYKRIKKAP 161
+ + K + A+F +PK +P T L SP L FG LS R FY + + K A
Sbjct: 301 DEIIADKKYTATFQKPKTSPAQFEPQATTLLSPHLHFGSLSVREFYWRVKDVVDSYKGAS 360
Query: 162 -PPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWD-----------------V 202
PP SL GQLL+R+ ++ A A F + NP C IPW V
Sbjct: 361 SPPESLIGQLLFRDMYFAAQAALGYVFSQTANNPYCRFIPWHLPSKRDPETGLVTGEYHV 420
Query: 203 NMEA----LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGM 258
+ E +W TGFPWIDA+M QL++EGWIHHL RHAVACFLTRG ++ WE G
Sbjct: 421 DSEEADIWFKRWKAGMTGFPWIDALMRQLKDEGWIHHLGRHAVACFLTRGGCYIDWERGC 480
Query: 259 KIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++F+E L+D + + N G W WLSCS+FF Q+F CY PV FG+K D G+FI
Sbjct: 481 EVFEEWLIDHEPACNVGNWQWLSCSAFFSQYFRCYSPVAFGQKWDKKGEFI 531
>gi|62001759|gb|AAX58599.1| cryptochrome [Danaus plexippus]
gi|357603254|gb|EHJ63675.1| cryptochrome [Danaus plexippus]
Length = 534
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 183/327 (55%), Gaps = 25/327 (7%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ S + + +L + +I+ NGG PLTY F V + +P V V +
Sbjct: 121 IGVSCREHVAHTLWNPDTVIKANGGIPPLTYQMFLHTVEIIGNPPRPVDDVDLNGVNFGS 180
Query: 61 TPLRDDHDEKYGV----PTLEELG--FDIEGLLPPTWKGGETEAMRRLERHLE------- 107
P + ++ V P E+LG + E + W GGET A+++++ L
Sbjct: 181 LP--ESFYREFVVFDKAPKPEDLGVFLENEDIRMIRWVGGETAALKQMQERLAVEYETFC 238
Query: 108 RKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-- 165
R +++ + G P LL LSP LRFGCLS R FY L L++++ + +
Sbjct: 239 RGSYLPTHGNP-----DLLGPPISLSPALRFGCLSVRRFYWSLQDLFQQVHQGRLASTQF 293
Query: 166 LHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIM 224
+ GQL+WRE+FY + NPN+ +M GNPIC+ IPW + + L +W +TGFP++DA M
Sbjct: 294 ITGQLIWREYFYTMSVNNPNYAQMSGNPICLDIPWKEPENDELQRWKEGRTGFPFVDAAM 353
Query: 225 TQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSS 284
QLR EGW+HH+ R+ VA FLTRG LW+SWE G++ F + LLDADWSV AG WMW+S S+
Sbjct: 354 RQLRTEGWLHHVVRNTVASFLTRGTLWLSWEHGLQHFLKYLLDADWSVCAGNWMWVSSSA 413
Query: 285 F--FQQFFHCYCPVKFGRKADPNGDFI 309
F C CPV+ GR+ +P G ++
Sbjct: 414 FEALLDSGECACPVRLGRRLEPTGHYV 440
>gi|408391364|gb|EKJ70743.1| hypothetical protein FPSE_09113 [Fusarium pseudograminearum CS3096]
Length = 637
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 134/351 (38%), Positives = 182/351 (51%), Gaps = 59/351 (16%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDS-----------PSPAEAPVTPLLVRQAT 60
+L S +I+EK+GGK ++ Q Q+ +K+ P P + PV T
Sbjct: 135 TLWDSDQIVEKHGGKPTMSITQLQAAGSKLGQVKKPIPAPKNLPDPGDMPVNFDQNEPDT 194
Query: 61 TP-----LRDDHDEKY----------GVPTLEELGFDIEGLLPPT---WKGGETEAMRRL 102
P +R + D+ Y + T+EELGF PP +GGET A++ L
Sbjct: 195 KPDFNSEIRTEGDKAYTKISGPKGDFAIETMEELGF------PPAATPHRGGETLALKAL 248
Query: 103 ERHLERKAWVASFGRPKMTPQSLLASQTGL-SPFLRFGCLSTRLFYHDLNKLYKRIKKAP 161
+ + K + A+F +PK +P T L SP L FG LS R FY + + K A
Sbjct: 249 DEIIADKKYTATFQKPKTSPAQFEPQATTLLSPHLHFGSLSVREFYWRVKDVVDSYKGAS 308
Query: 162 -PPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWD-----------------V 202
PP SL GQLL+R+ ++ A A F + NP C IPW V
Sbjct: 309 SPPESLIGQLLFRDMYFAAQAALGYVFSQTANNPYCRFIPWHLPSKRDPETGLVTGEYHV 368
Query: 203 NMEA----LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGM 258
+ E +W TGFPWIDA+M QL++EGWIHHL RHAVACFLTRG ++ WE G
Sbjct: 369 DSEEAEIWFKRWRAGMTGFPWIDALMRQLKDEGWIHHLGRHAVACFLTRGGCYIDWERGC 428
Query: 259 KIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++F+E L+D + + NAG W WLSCS+FF Q+F CY PV FG+K D G+ I
Sbjct: 429 EVFEEWLIDHEPACNAGNWQWLSCSAFFSQYFRCYSPVAFGQKWDKKGELI 479
>gi|340376095|ref|XP_003386569.1| PREDICTED: cryptochrome-2-like [Amphimedon queenslandica]
Length = 550
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 186/312 (59%), Gaps = 12/312 (3%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQA 59
M+ +E+ +L S +I+ N GK LT+ F+++++K+ P+ P +P T +
Sbjct: 179 MNIEVEEFHNHTLYSPTELIKLNEGKPILTFKDFRTLLSKLKPPAVPISSPSTKQKYNED 238
Query: 60 TTPLRDDHDEKYGVPTLEELG-FDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRP 118
P+ + + +P+L LG +D+E P W GGETEA++RL+ + ++ +P
Sbjct: 239 NIPMFKV--QTFQIPSLASLGCYDVELGTGP-WVGGETEALKRLDNYCTVRS------KP 289
Query: 119 KMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK-KAPPPLSLHGQLLWREFFY 177
L +T LSP++RFGCLS R F+H + +L K K + +LL REF++
Sbjct: 290 FDNFLDCLFDKTSLSPYVRFGCLSVRHFWHYVRQLASTDKSKMTLVQEVSSKLLQREFYF 349
Query: 178 CAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLA 237
+++ PNFD NPIC+Q+PW+ + + L +W + TG+PWIDA + Q+ +EGWIH+L
Sbjct: 350 LVSSQVPNFDTDTQNPICIQLPWEFDADGLRRWRSGMTGYPWIDAAIRQMLKEGWIHNLL 409
Query: 238 RHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVK 297
R ++A FLTRGDLW+SW +G + F+ +LD + SV+ G WM S ++F Y P+
Sbjct: 410 RESIATFLTRGDLWISWLKGAESFEMYMLDYEPSVSCGCWMKSSSTAFITGTIEHYNPIS 469
Query: 298 FGRKADPNGDFI 309
+G++ DPNGD+I
Sbjct: 470 YGQQLDPNGDYI 481
>gi|284506739|dbj|BAI67363.1| cryptochrome [Bactrocera cucurbitae]
Length = 547
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 175/321 (54%), Gaps = 18/321 (5%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSP-SPAEAPV-TPLLVRQATTPLR 64
+K++ +L R +I NGG PLTY F V + P P E P + + T +
Sbjct: 136 EKVSHTLWDPRTVISTNGGIPPLTYQMFLHTVEIIGVPPRPVEDPDWDGVEFLKLTDNML 195
Query: 65 DDHDEKYGVPTLEELGF---DIEGLLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPK 119
+ + + PT E+ ++ + W GGE +A+ L+ L E +A+ + P
Sbjct: 196 MELNAFWRFPTPEDFNVYPDNVSYVAKVKWHGGEQQALLHLDERLKVEERAFKNGYYLPN 255
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--------GQLL 171
++L S +S LRFGCLS R FY ++ L+K ++ +H GQL+
Sbjct: 256 QANPNILESPKSMSAHLRFGCLSVRRFYWSVHDLFKHVQIEALRQRVHMAGGEHITGQLI 315
Query: 172 WREFFYCAATRNPNFDRMLGNPICVQIPWDV-NMEALAKWANAQTGFPWIDAIMTQLREE 230
WRE+FY + NP +DRM GN IC+ IPW N E L W + QTGFP IDA M QL E
Sbjct: 316 WREYFYTMSVNNPYYDRMEGNAICLNIPWAAPNKEQLQSWRSGQTGFPLIDAAMRQLLAE 375
Query: 231 GWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFF 290
GW+HH R+ VA FLTRG LW SWE G++ F + LLDADWSV AG WMW+S S+F +
Sbjct: 376 GWLHHTLRNTVATFLTRGALWQSWEHGLRHFLKYLLDADWSVCAGNWMWVSSSAFERLLD 435
Query: 291 HCY--CPVKFGRKADPNGDFI 309
CP+ F ++ DP G++I
Sbjct: 436 SSLVSCPIAFSKRLDPKGEYI 456
>gi|386762983|gb|AFJ22638.1| cryptochrome 1 [Agrotis ipsilon]
Length = 528
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 173/305 (56%), Gaps = 14/305 (4%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTP--LRDDHDEKYGVPTL 76
+I+ NGG PLTY F V + P + V+ + P ++ P
Sbjct: 139 VIKANGGIPPLTYQMFLHTVTTIGDPPRPVHDIDLRRVKFGSLPECFYNEFTVFDKAPKP 198
Query: 77 EELG--FDIEGLLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPKMTPQSLLASQTGL 132
E+LG + E + W GGE+ A++++++ L E + ++ P LL L
Sbjct: 199 EDLGVFLENEDIRMIRWVGGESTALKQMQQRLAVEHETFLRGSYLPTHGNPDLLGPPISL 258
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-----LHGQLLWREFFYCAATRNPNFD 187
SP LRFGCLS R FY + L++++ + + GQL+WRE+F+ + NPN+
Sbjct: 259 SPALRFGCLSVRSFYWSVQDLFRKVHQGRLTTQSASHFITGQLIWREYFHTMSVNNPNYG 318
Query: 188 RMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
+M GNPIC+ IPW + + L +W + +TGFP++DA M QL+ EGW+HH AR+ VA FLT
Sbjct: 319 QMSGNPICLDIPWKNPEGDELKRWEDGRTGFPFVDATMRQLKTEGWLHHAARNTVASFLT 378
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF--FQQFFHCYCPVKFGRKADP 304
RG LW+SWE G+ F + LLD DWSV AG WMW+S S+F C CPV+ G++ DP
Sbjct: 379 RGTLWLSWEHGLNHFLKYLLDVDWSVCAGNWMWVSSSAFEALLDSGECACPVRLGQRLDP 438
Query: 305 NGDFI 309
+G+++
Sbjct: 439 SGEYV 443
>gi|13022111|gb|AAK11644.1|AF333998_1 cryptochrome [Antheraea pernyi]
Length = 525
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 171/304 (56%), Gaps = 15/304 (4%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGV----P 74
+I NGG PLTY F V + P V + T P D +++ V P
Sbjct: 139 VIRANGGIPPLTYQMFLHTVTIVGDPPRPVPDVDMSGITFGTLP--DCFYQEFTVFDKTP 196
Query: 75 TLEELG--FDIEGLLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPKMTPQSLLASQT 130
E+LG + E + W GGET A++++++ L E + + P LL
Sbjct: 197 KPEDLGVFLENEDIRMIRWVGGETAALKQMQQRLAVEHETFRKGSYLPTHGSPDLLGPPI 256
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS--LHGQLLWREFFYCAATRNPNFDR 188
LSP LRFGCLS R FY + L++++ + + + GQL+WRE+FY + NPN+ +
Sbjct: 257 SLSPALRFGCLSVRSFYWSVQDLFRQVHQGRLSSAHFITGQLIWREYFYTMSVNNPNYGQ 316
Query: 189 MLGNPICVQIPWD-VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
M NPIC+ IPW + L +W +TGFP+IDA M QLR EGW+HH R+ VA FLTR
Sbjct: 317 MADNPICLDIPWKHPEGDELQRWIEGRTGFPFIDAAMRQLRAEGWLHHAVRNTVASFLTR 376
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF--FQQFFHCYCPVKFGRKADPN 305
G LW+SWE G+ F + LLDADWSV AG WMW+S S+F C CPV+ G++ DP+
Sbjct: 377 GTLWLSWEHGLNHFLKYLLDADWSVCAGNWMWVSSSAFEALLDSGECACPVRLGQRLDPS 436
Query: 306 GDFI 309
G+++
Sbjct: 437 GEYV 440
>gi|310791567|gb|EFQ27094.1| DNA photolyase [Glomerella graminicola M1.001]
Length = 628
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 180/352 (51%), Gaps = 60/352 (17%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDS-----------PSPAEAPVTPLLVRQAT 60
+L S ++ K+GGK ++ Q Q+ AK+ P+P E PV T
Sbjct: 136 TLWDSDAVVAKHGGKPTMSISQLQTAGAKVGPIAKPIPAPQSLPNPGEMPVDFGQTPPET 195
Query: 61 TP-----LRDDHDEKYG----------VPTLEELGFDIEGLLPPT---WKGGETEAMRRL 102
P R + D Y + T+EELGF PP +GGET A+ L
Sbjct: 196 EPDFNAEQRTEGDAAYAKIAGPEGDFAIETMEELGF------PPASTPHRGGETRALGML 249
Query: 103 ERHLERKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAP 161
E L K + A+F +PK +P + S T +SPFL FG LS R FY + + K
Sbjct: 250 EEILADKKYTATFEKPKTSPAAFEPQSTTFMSPFLHFGALSVREFYWRVRAVVDAYGKGA 309
Query: 162 P--PLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDVNMEALAK--------- 209
P SL GQLL+R+ ++ A A +F + NP C IPW + + AK
Sbjct: 310 SKVPESLLGQLLFRDMYFAAHAALGYSFTQTANNPYCRFIPWHLPSKVDAKTGLVTGEYH 369
Query: 210 ------------WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
W TGFPWIDA+M QLREEGWIHHL RH+VACFLTRG ++ WE G
Sbjct: 370 VDSTQADEWFRRWKYGVTGFPWIDALMRQLREEGWIHHLGRHSVACFLTRGGCYIDWERG 429
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++F+E LLD + + NAG W WLSC++FF Q+F CY PV FG+K D G ++
Sbjct: 430 CEVFEEWLLDHEPACNAGNWQWLSCTAFFSQYFRCYSPVSFGQKWDKQGAYV 481
>gi|392587897|gb|EIW77230.1| hypothetical protein CONPUDRAFT_129501 [Coniophora puteana
RWD-64-598 SS2]
Length = 658
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/278 (43%), Positives = 158/278 (56%), Gaps = 42/278 (15%)
Query: 68 DEKYGVPTLEELGFDIEGLLPP---TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
+ ++ +P+++ELG LPP + GGETEA+RRL+ + K VA+F +PK +P
Sbjct: 223 NNEFAIPSMDELG------LPPATTSIYGGETEALRRLDAYCRDKVRVATFAKPKTSPAE 276
Query: 125 LLA-SQTGLSPFLRFGCLSTRLF----------YHDLNKLYKRIKKAP-PPLSLHGQLLW 172
+ T LSP+L+FGCLS+R F Y N K+ K A PP +L GQLL+
Sbjct: 277 FDPPATTLLSPYLKFGCLSSREFLWRVRDAVDEYVKSNGDAKKSKPASKPPENLEGQLLF 336
Query: 173 REFFYCA-ATRNPNFDRMLGNPICVQIPWD--------------------VNMEALAKWA 211
RE +Y A + NF ++ GN IC I W V+ E W
Sbjct: 337 REMYYAAECAQGINFGQVRGNSICRFIDWKLPNQYAADGSKLVPRPRGNAVDEERFQSWK 396
Query: 212 NAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWS 271
+TGFPWIDAIM QLR EGWIHHLARH+VACFLTRG ++SWE G ++FDELL+D D
Sbjct: 397 EGKTGFPWIDAIMRQLRLEGWIHHLARHSVACFLTRGQCYISWERGAEVFDELLIDWDPC 456
Query: 272 VNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
NAG WMWLSCS+FF ++ Y F K D G +
Sbjct: 457 SNAGNWMWLSCSAFFSSYYRVYGVKSFPEKFDKTGKLV 494
>gi|343429136|emb|CBQ72710.1| related to Deoxyribodipyrimidine photolyase [Sporisorium reilianum
SRZ2]
Length = 684
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 179/370 (48%), Gaps = 80/370 (21%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKM-DSPSPAEAPVT---PLLVRQATTPLRD--------- 65
++++N GK + Q IVA M D P P +AP P L + PL+D
Sbjct: 143 VVKRNKGKPTMALSTLQKIVANMGDVPKPIDAPTDLPLPTLNDSKSKPLKDTLSELATSL 202
Query: 66 ----------------------------------------DHDEKYGVPTLEELGFDIEG 85
D E +GVPTL LG D
Sbjct: 203 DGLPHYTGKGREGPASVDLNSSELGGQRDEKVTCYETVSGDASELFGVPTLASLGMDASK 262
Query: 86 LLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA--SQTGLSPFLRFGCLST 143
+ T KGGE A+ +L + + +VA+F +PK +P S T +SP+L+FGCLS
Sbjct: 263 VRD-TIKGGEPLALEKLAKICKDAEYVATFAKPKTSPGDSAEDPSTTLMSPYLKFGCLSV 321
Query: 144 RLFYHDL---NKLYKRIKKAPPPLSLHGQLLWREFFYCAA-TRNPNFDRMLGNPICVQIP 199
R F+ D+ K YK K PP +L+GQLL+R+ + CA +F R+ GN +C +
Sbjct: 322 RKFWWDVEEAKKKYKGGSKTGPPENLNGQLLFRDMYACAEHAIGDDFQRVRGNEVCRYMD 381
Query: 200 W------DVNMEA--------------LAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
W D N E L+ + QTGFPWIDA+M QLR EGW+HHL RH
Sbjct: 382 WYLPTQYDKNGEVIVPRPAGDAVSEARLSAYKLGQTGFPWIDALMRQLRLEGWMHHLGRH 441
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
+VA FLTRG W+SWE G +IFDE L+D D N G WMWLSCS+FF Q+F Y F
Sbjct: 442 SVAAFLTRGQCWISWERGAEIFDEYLIDWDPCSNPGNWMWLSCSAFFTQYFRLYGLATFP 501
Query: 300 RKADPNGDFI 309
K D G +
Sbjct: 502 AKYDKTGALV 511
>gi|330915233|ref|XP_003296949.1| hypothetical protein PTT_07199 [Pyrenophora teres f. teres 0-1]
gi|311330639|gb|EFQ94953.1| hypothetical protein PTT_07199 [Pyrenophora teres f. teres 0-1]
Length = 655
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 187/356 (52%), Gaps = 60/356 (16%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQS-----------IVAKMDSPSPAEAPVTPLLV 56
K +L ++ +N GK ++ Q Q+ I A P+P + +
Sbjct: 131 KTGRTLYDPDELVMQNHGKPTMSITQVQAAGKKIGRIPRPIPAPKSIPNPGDTDLKFDQE 190
Query: 57 RQATTP-----LRDDHDEKY----------GVPTLEELGFDIEGLLPPT--WKGGETEAM 99
R + P RD H+ Y VPT+EELG L P T +GGETEA+
Sbjct: 191 RPESQPDVNAIQRDGHEASYTALAGPNSDFAVPTMEELG-----LKPATTAHRGGETEAL 245
Query: 100 RRLERHLERKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFY---HDLNKLYK 155
R L+ + + + A+F +PK P + S T LSP + FG LS RLFY D+ +K
Sbjct: 246 RALDEIIANEEYTATFEKPKTAPTAFEPQSTTLLSPHMHFGSLSCRLFYWRAQDVVDKFK 305
Query: 156 RIKKAPPPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDV------------ 202
K + PP+SL GQLL+R+ ++ A A +F + NP C IPW +
Sbjct: 306 G-KASQPPVSLTGQLLFRDMYFGAQAALGYSFGQTYNNPNCRFIPWHLPSKIDTKSGLIT 364
Query: 203 ------NMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
N EA +W + QTGFPWIDA+M QL +EGWIHHL RHAVACFLTRG ++
Sbjct: 365 GEYMVDNAEAETHFQRWKHGQTGFPWIDALMRQLAQEGWIHHLGRHAVACFLTRGGCYID 424
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE G ++F+E L+D + + N G W WLSC++FF QF+ CY P+ F +K D G+F+
Sbjct: 425 WERGAEVFEEWLIDHEAACNIGNWQWLSCTAFFAQFYRCYSPIAFPQKWDKEGEFV 480
>gi|210136298|gb|ACJ08741.1| cryptochrome [Neobellieria bullata]
Length = 542
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/323 (38%), Positives = 175/323 (54%), Gaps = 22/323 (6%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDD 66
++++ +L +++I NGG PLTY F V + P P P P L +
Sbjct: 131 ERISHTLWDPKKVINTNGGIPPLTYQMFLHTVQIIGLP-PRPVP-DPDWHNVKFVKLSEK 188
Query: 67 HDEKYGV----PTLEELGF---DIEGLLPPTWKGGETEAMRRLERHL--ERKAWVASFGR 117
+ GV PT E+ + L W GGET+A+ L++ L E A+ +
Sbjct: 189 LIKDLGVFLESPTPEDFSVYPDSLSYLAKVKWIGGETQALLHLDQRLKVEESAFKCGYYL 248
Query: 118 PKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL--------HGQ 169
P ++L S +S LRFGCLS R FY D++ L+K +++ L + GQ
Sbjct: 249 PNQAKPNILESPKSMSAHLRFGCLSVRKFYWDVHDLFKDVQQQAECLGMLMSGGAHITGQ 308
Query: 170 LLWREFFYCAATRNPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLR 228
L+WRE+FY + NPN+DRM GN IC+ IPW + N L +W +TGFP IDA M QL
Sbjct: 309 LIWREYFYTMSVNNPNYDRMEGNEICLNIPWAETNHIQLQRWTQGKTGFPLIDAAMRQLL 368
Query: 229 EEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ 288
EGW+HH R+ VA FLTRG LW +WE G++ F + LLDADWSV AG WMW+S S+F +
Sbjct: 369 AEGWLHHTLRNTVATFLTRGGLWQNWEHGLRYFLKYLLDADWSVCAGNWMWVSSSAFERL 428
Query: 289 FFH--CYCPVKFGRKADPNGDFI 309
CP+ ++ DP G +I
Sbjct: 429 LDSSLVTCPIALAKRLDPMGQYI 451
>gi|388582367|gb|EIM22672.1| hypothetical protein WALSEDRAFT_53945 [Wallemia sebi CBS 633.66]
Length = 554
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 181/344 (52%), Gaps = 55/344 (15%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTP--------LLVRQATTPLRDDHD-- 68
+IEKN G+ T F+++V M+ P P E P + +R+ + HD
Sbjct: 139 VIEKNKGEPTTTAQGFKNLVKDMEIPRPTEGPTSMPKADNLKLEAIRKEVKLFKPGHDIN 198
Query: 69 ------------------EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKA 110
+ PTLEELG+D++ GGE EA+RRL++ ++ +
Sbjct: 199 AEHRKGRMTVYDSVTGVKDILASPTLEELGYDVKEATTQI-PGGEDEALRRLDKWIQDED 257
Query: 111 WVASFGRPKMTPQSLLA-SQTGLSPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLH 167
A+F +P+ +P + T LSP+++FG L R FY + L + + + P +L
Sbjct: 258 ATATFRKPQTSPAEYDPPATTQLSPYIKFGALGVREFYWKVVDLMDQYDGETSSEPENLP 317
Query: 168 GQLLWREFFYCA--ATRNPNFDRMLGNPICVQIPWDV--------------------NME 205
GQL++RE ++ A A P F ++ GN IC I W + + E
Sbjct: 318 GQLIFREMYFAAQLAIGKP-FGQIRGNKICRLIDWKLCNVYDENGEQIIPRPKGPKEDEE 376
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
AL KWA+ TGFPWIDA M QL++EGW+HHLARH+VACFLTRG L++SWE G ++FD L
Sbjct: 377 ALQKWADGFTGFPWIDAAMRQLKQEGWMHHLARHSVACFLTRGQLYISWERGAEVFDRYL 436
Query: 266 LDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + NAG WMWLSCS FF Q++ Y F K D G +
Sbjct: 437 VDRDPASNAGNWMWLSCSCFFHQYYRNYGTTTFPAKYDKTGKLV 480
>gi|51944883|gb|AAU14170.1| cryptochrome [Bactrocera tryoni]
Length = 547
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 175/321 (54%), Gaps = 18/321 (5%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSP-SPAEAPV-TPLLVRQATTPLR 64
+K++ +L R +I NG PLTY F V + +P P E P + + T +
Sbjct: 136 EKVSHTLWDPRTVISTNGRIPPLTYQMFLHTVEIIGAPPRPVEDPEWDGVEFLKLTDNML 195
Query: 65 DDHDEKYGVPTLEELGF---DIEGLLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPK 119
+ + + PT E+ +I + W+GGE +A+ L L E +A+ + P
Sbjct: 196 MELNAFWQFPTPEDFNIFPDNISYVAKVKWRGGEQQALLHLAERLKVEERAFKNGYYLPN 255
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--------GQLL 171
++L S +S LRFGCLS R FY ++ L+K ++ +H GQL+
Sbjct: 256 QANPNILESPKSMSAHLRFGCLSVRRFYWSVHDLFKHVQIEAFYHRIHMAGGEHITGQLI 315
Query: 172 WREFFYCAATRNPNFDRMLGNPICVQIPWDV-NMEALAKWANAQTGFPWIDAIMTQLREE 230
WRE+FY + NP +DRM GN IC+ IPW N E L W + QTGFP IDA M QL E
Sbjct: 316 WREYFYTMSVNNPYYDRMEGNEICLNIPWAPPNQEQLQSWRSGQTGFPLIDAAMRQLLAE 375
Query: 231 GWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFF 290
GW+HH R+ VA FLTRG LW SWE G++ F + LLDADWSV AG WMW+S S+F +
Sbjct: 376 GWLHHTLRNTVATFLTRGALWQSWEHGLRHFLKYLLDADWSVCAGNWMWVSSSAFERLLD 435
Query: 291 HCY--CPVKFGRKADPNGDFI 309
CP+ F ++ DP G++I
Sbjct: 436 SSLVSCPIAFSKRLDPKGEYI 456
>gi|170878123|gb|ACB38886.1| putative 6-4 photolyase [Cercospora zeae-maydis]
Length = 691
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 190/379 (50%), Gaps = 80/379 (21%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQ-------SIVAKMDSPSPAEAPVTPLLVRQAT 60
K+ +L I++ NGGK ++ Q Q I +++P+ P L + T
Sbjct: 131 KVGRTLYDPDEIVKNNGGKPTMSITQLQHAGNKIGEIEEPVETPTSLPDPGEMKLEIEHT 190
Query: 61 TP-----LRDDHDEKYGV---------------PTLEELGFDIEGLLPPTWKGGETEAMR 100
P + H EK V PTLEELG + P KGGE+ +
Sbjct: 191 EPEAEPDINAKHREKDTVTFSSGIAGPKGDFSPPTLEELG--MPAATSPH-KGGESVVLE 247
Query: 101 RLERHLERKAWVASFGRPKMTPQSLLASQTGL-SPFLRFGCLSTRLFYHDLNKLYKRIKK 159
RLE + + + +F +PK +P + T L SP+L FG LS R FYH + ++ + K
Sbjct: 248 RLEEMFKDEDYTGTFQKPKTSPAAFEPQSTFLTSPYLHFGALSCRYFYHRVAEIVAKRNK 307
Query: 160 -----APPPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPW----DVNMEA--- 206
+ PP SL GQLL+R+ ++ A A F + LGN C IPW V+M +
Sbjct: 308 EKKPTSSPPESLAGQLLFRDMYFAAQAALGWQFGQTLGNSHCRFIPWHLPSKVDMSSKRI 367
Query: 207 --------------LAKWANAQTGFPWIDA----------------------IMTQLREE 230
L +W + TGFPWID+ IM QLR E
Sbjct: 368 TGAHEIDSEETELWLQRWTHGITGFPWIDSEETELWLQRWTHGTTGFPWIDVIMRQLRHE 427
Query: 231 GWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFF 290
GWIHHLARH+VACFLTRG ++SWE G+++F+ELL+D + + N G W WLSC++FF QF+
Sbjct: 428 GWIHHLARHSVACFLTRGGCYISWERGLEVFEELLIDHESACNIGNWQWLSCTAFFAQFY 487
Query: 291 HCYCPVKFGRKADPNGDFI 309
CY PV FG+K D NGDFI
Sbjct: 488 RCYSPVAFGKKWDENGDFI 506
>gi|400602563|gb|EJP70165.1| DNA photolyase [Beauveria bassiana ARSEF 2860]
Length = 623
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 179/345 (51%), Gaps = 54/345 (15%)
Query: 16 SRRIIEKNGGKTPLTYHQFQSIVAKMDS-----------PSPAEAPVT-----PLLVRQA 59
S +I+ KN GK ++ Q Q+ K+ P P + P+ P
Sbjct: 139 SDQIVAKNHGKPTMSITQLQAAGKKLGPIDRPIPAPSSLPDPGDMPLDFEHEHPSSKPDV 198
Query: 60 TTPLRDDHDEKY----------GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERK 109
+ R +D +Y G+ T+EELGF P +GGET A++ L+ + K
Sbjct: 199 NSVRRTKNDTEYKSIAGPKGDFGIETMEELGFP-SATTP--HRGGETRALKMLDDIAKDK 255
Query: 110 AWVASFGRPKMTP-QSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK--APPPLSL 166
+ A+F +PK +P Q S T LSPFL FG LS R Y + + K + PP SL
Sbjct: 256 KYTATFEKPKTSPAQFEPQSTTLLSPFLHFGALSVRELYWRVQDIVTAYGKGASSPPASL 315
Query: 167 HGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDVNMEA------------------- 206
GQLL+R+ ++ A A P+F + GN C IPW + +
Sbjct: 316 TGQLLFRDMYFAAQAAIGPSFTQTNGNGHCKFIPWHLPSKVDLATGISTGEYRVDSPEAE 375
Query: 207 --LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDEL 264
A+W TGFPWIDA+M QLR +GWIHHL RH+VACFLTRG +V WE G ++F+E
Sbjct: 376 QWFARWKAGMTGFPWIDALMRQLRHDGWIHHLGRHSVACFLTRGGCYVDWERGAQVFEEY 435
Query: 265 LLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LLD + + NAG W WLSC++FF Q+F Y PV F +K D NGDF+
Sbjct: 436 LLDHEPACNAGNWQWLSCTAFFSQYFRMYSPVSFPQKWDKNGDFV 480
>gi|358385715|gb|EHK23311.1| putative photolyase class 1 [Trichoderma virens Gv29-8]
Length = 627
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 183/352 (51%), Gaps = 60/352 (17%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQS-----------IVAKMDSPSPAEAPVT-----PLL 55
+L S I++ +GGK ++ Q Q+ I A P P + PV P
Sbjct: 135 TLWDSDDIVKHHGGKPTMSITQLQAAGKKIGPVAKPIPAPESLPDPGDMPVDFERHLPET 194
Query: 56 VRQATTPLRDDHDEKY----------GVPTLEELGFDIEGLLPPT---WKGGETEAMRRL 102
R + D +Y + TLEELGF PP +GGET A++ L
Sbjct: 195 KPDFNESYRSEEDTEYKHIAGPNGDFAIETLEELGF------PPATTPHRGGETRALKAL 248
Query: 103 ERHLERKAWVASFGRPKMTP-QSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAP 161
+ L+ K + A+F +PK +P Q S T LSPF FG LS RLFY ++ + + KA
Sbjct: 249 DELLKDKKYTATFQKPKTSPAQFNPQSTTLLSPFFHFGALSVRLFYWRVHAIVESYGKAA 308
Query: 162 --PPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDV---------------- 202
PP SL GQ+L+R+ ++ A A +F + NP C IPW +
Sbjct: 309 SSPPESLIGQVLFRDMYFAAQAALGASFAQTAMNPYCRFIPWHLPSKRDPDTGLATGDHH 368
Query: 203 --NMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
N +A +W TGFPWIDA+M QLR +GWIHHL RH+VACFLTRG +V WE G
Sbjct: 369 IDNQQAETWFQRWKAGVTGFPWIDALMRQLRHDGWIHHLGRHSVACFLTRGGCYVDWERG 428
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++F+E L+D + + N G W WLSC++FF Q+F CY PV FG+K D +G I
Sbjct: 429 AEVFEEWLIDHEPACNIGNWQWLSCTAFFTQYFRCYSPVSFGQKWDKDGALI 480
>gi|284506737|dbj|BAI67362.1| cryptochrome [Bactrocera cucurbitae]
Length = 547
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 173/321 (53%), Gaps = 18/321 (5%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSP-SPAEAPV-TPLLVRQATTPLR 64
+K++ +L R +I NGG PLTY F V + P P E P + + T +
Sbjct: 136 EKVSHTLWDPRTVISTNGGIPPLTYQMFLHTVEIIGVPPRPVEDPDWDGVEFLKLTDNML 195
Query: 65 DDHDEKYGVPTLEELGF---DIEGLLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPK 119
+ + + PT E+ ++ + W GGE +A+ L+ L E +A+ + P
Sbjct: 196 MELNAFWRFPTPEDFNVYPDNVSYVAKVKWHGGEQQALLHLDERLKVEERAFKNGYYLPN 255
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--------GQLL 171
++L S +S LRFGCLS R FY ++ L+K ++ +H GQL+
Sbjct: 256 QANPNILESPKSMSAHLRFGCLSVRRFYWRVHDLFKHVQIEALRQRVHMAGGEHITGQLI 315
Query: 172 WREFFYCAATRNPNFDRMLGNPICVQIPWDV-NMEALAKWANAQTGFPWIDAIMTQLREE 230
WRE+FY + NP +DRM GN IC+ IPW N E L W + QTGFP IDA M QL E
Sbjct: 316 WREYFYTMSVNNPYYDRMEGNAICLNIPWAAPNKEQLQSWRSGQTGFPLIDAAMRQLLAE 375
Query: 231 GWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFF 290
GW+HH R+ VA FLTR LW SWE G++ F LLDADWSV AG WMW+S S+F +
Sbjct: 376 GWLHHTLRNTVATFLTRXALWQSWEHGLRXFLXYLLDADWSVCAGNWMWVSSSAFERLLD 435
Query: 291 HCY--CPVKFGRKADPNGDFI 309
CP+ F ++ DP G++I
Sbjct: 436 SSLVSCPIAFSKRLDPKGEYI 456
>gi|325180459|emb|CCA14865.1| cryptochrome putative [Albugo laibachii Nc14]
Length = 616
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 173/344 (50%), Gaps = 56/344 (16%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSP-----SPAEAPV--------------- 51
+L + I+ N + PL + F IV+ M P +P++ P
Sbjct: 201 TLHDPKEIVTLNHNQVPLDFQNFLDIVSDMPQPRLPLLTPSQLPSFESVISVETLCECFQ 260
Query: 52 ------TPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWK----GGETEAMRR 101
+ L + +A + + YG+ T+ L D+ G L P+ GGE+ A+ R
Sbjct: 261 AEYLSQSLLNITEAQLLIDTIIGKAYGLLTIPAL--DVFGYLTPSQHSFLYGGESVALER 318
Query: 102 LERHLERKAWVASFGRPKMTP-QSLLASQTGLSPFLRFGCLSTRLFYHDLNKL---YKRI 157
LE + V F +PK +P Q S T LSP+L FGCLS R ++ + + + +
Sbjct: 319 LEVFCSIEERVGCFEKPKTSPVQMNPPSTTALSPYLAFGCLSVRALFYRIMFIQLNFSSV 378
Query: 158 KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWD---------------- 201
K P SL GQL+WREFFYC A P F NP+C +I W
Sbjct: 379 SKGSPATSLDGQLMWREFFYCYAHNVPEFASPEQNPLCRKIGWRLQNEDSDPLTTHSSSK 438
Query: 202 ----VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
V E WA +TGFPWIDAIM Q+ EGW HHLARHAVACFLTRGDL++SW G
Sbjct: 439 EEDLVASEQFTCWARGKTGFPWIDAIMRQILTEGWAHHLARHAVACFLTRGDLYISWIHG 498
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRK 301
K+F ELL+D DW++N G W+W+S S FF F + + P F ++
Sbjct: 499 AKLFQELLIDMDWAINVGNWLWVSASCFFHDFQNVFSPSTFPQQ 542
>gi|358394356|gb|EHK43749.1| DNA photolyase [Trichoderma atroviride IMI 206040]
Length = 625
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 185/351 (52%), Gaps = 58/351 (16%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDS-----------PSPAEAPV-----TPLL 55
+L S I+EK+GGK ++ Q Q+ K+ P P + PV P
Sbjct: 135 TLWDSDGIVEKHGGKPTMSITQLQAAGKKIGPVAKPLPAPERFPDPGDMPVDFEQHVPDK 194
Query: 56 VRQATTPLRDDHDEKY----------GVPTLEELGFDIEGLLPPT--WKGGETEAMRRLE 103
R + D Y + TLEELGF P T +GGE+ A++ L+
Sbjct: 195 HPDFNAGYRSEKDTGYNAIAGPNGDFAIETLEELGF-----APATTPHRGGESIALKTLD 249
Query: 104 RHLERKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK--A 160
++ K + A+F +PK +P S T LSPF FG LS RLFY ++++ + K +
Sbjct: 250 GLIKNKRYTATFEKPKTSPAQFEPQSTTLLSPFFHFGALSVRLFYWRVHEVVESYGKGAS 309
Query: 161 PPPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPW---------------DVNM 204
PP SL GQ+L+R+ ++ A A +F + N C IPW D ++
Sbjct: 310 TPPASLIGQVLFRDMYFAAQAALGQSFAQTATNAYCRFIPWHLPSKRDPETGFATGDYHI 369
Query: 205 EA------LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGM 258
+ +W TGFPWIDA+M QL++EGWIHHL RH++ACFLTRG +V WE G
Sbjct: 370 DKPKAEEWFQRWKAGVTGFPWIDALMRQLKQEGWIHHLGRHSLACFLTRGGCYVDWERGA 429
Query: 259 KIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++F+ELL+D + + N G W WL+C +FF Q++ CY PV FG+K D NGDFI
Sbjct: 430 EVFEELLIDHEPACNIGNWQWLACVAFFAQYYRCYSPVSFGQKWDKNGDFI 480
>gi|312371404|gb|EFR19605.1| hypothetical protein AND_22153 [Anopheles darlingi]
Length = 608
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 123/331 (37%), Positives = 176/331 (53%), Gaps = 27/331 (8%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKM-DSPSPAEAP--------V 51
M + ++ +L + +I+ NG PLTY F V + + P P AP
Sbjct: 188 MDVKCVENVSHTLWNPNEVIQTNGDIPPLTYQMFLHTVDIIGEPPRPVGAPDFEFIEFGR 247
Query: 52 TPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEG---LLPPTWKGGETEAMRRLERHL-- 106
P ++ + H +P EE G +G + W GGET A+ L L
Sbjct: 248 IPAILASELKLYQQQH-----MPGPEEFGLTYDGNADIAFQKWIGGETRALESLGARLKQ 302
Query: 107 ERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK-----KAP 161
E +A+ + P +L T +S LRFGCLS R+FY ++ L+ +++ K P
Sbjct: 303 EEEAFREGYYLPTQAKPEILGPATSMSAALRFGCLSVRMFYWCVHDLFAKVQASSQFKCP 362
Query: 162 PPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWI 220
+ GQL+WRE+FY + RNP++ M NPIC+ IPW + ++L +W +TGFP I
Sbjct: 363 IGQHITGQLIWREYFYTMSVRNPHYGEMDRNPICLNIPWYEPVDDSLVRWKEGRTGFPLI 422
Query: 221 DAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL 280
DA M QL EGW+HH+ R+ A FLTRG LW+SWE G++ F + LLDADWSV AG WMW+
Sbjct: 423 DAAMRQLLAEGWLHHILRNITATFLTRGGLWISWEAGLQHFLKYLLDADWSVCAGNWMWV 482
Query: 281 SCSSFFQQF--FHCYCPVKFGRKADPNGDFI 309
S S+F + C CPV + DP GD++
Sbjct: 483 SSSAFERLLDSSKCTCPVALAYRLDPTGDYV 513
>gi|195157984|ref|XP_002019874.1| GL12637 [Drosophila persimilis]
gi|198455482|ref|XP_001360014.2| GA17677 [Drosophila pseudoobscura pseudoobscura]
gi|205696352|sp|Q293P8.2|CRY1_DROPS RecName: Full=Cryptochrome-1
gi|194116465|gb|EDW38508.1| GL12637 [Drosophila persimilis]
gi|198133263|gb|EAL29166.2| GA17677 [Drosophila pseudoobscura pseudoobscura]
Length = 540
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 173/323 (53%), Gaps = 22/323 (6%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSP-SPA-EAPVTPLLVRQATTPLR 64
+K++ +L R +IE NGG PLTY F V + P PA +A + Q LR
Sbjct: 134 EKVSHTLWDPRLVIETNGGIPPLTYQMFLHTVQIIGVPPRPAIDAHINDATFIQLAPELR 193
Query: 65 DDHDEKYGVPTLEELGF--DIEGLLPP-TWKGGETEAMRRLERHL--ERKAWVASFGRPK 119
VP E D G L W+GGET+A+ LE L ER A+ + P
Sbjct: 194 QHLGCFDQVPNPEHFNIYSDNMGFLAKINWRGGETQALALLEERLKVERNAFERGYYLPN 253
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--------GQLL 171
++ + +S LRFGCLS R FY ++ L++ ++ A + GQL+
Sbjct: 254 QANPNIQEAPKSMSAHLRFGCLSVRRFYWSVHDLFENVQLAACVRGVQIEGGAHITGQLI 313
Query: 172 WREFFYCAATRNPNFDRMLGNPICVQIPW---DVNMEALAKWANAQTGFPWIDAIMTQLR 228
WRE+FY + NPN+DRM GN IC+ IPW D N+ L +W QTGFP ID M QL
Sbjct: 314 WREYFYTMSVNNPNYDRMEGNEICLTIPWAKPDENL--LQRWRLGQTGFPLIDGAMRQLL 371
Query: 229 EEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ 288
EGW+HH R+ VA FLTRG LW SWE G+K F + LLDADWSV AG WMW+S S+F +
Sbjct: 372 AEGWLHHTLRNTVATFLTRGGLWQSWEPGLKHFLKYLLDADWSVCAGNWMWVSSSAFERL 431
Query: 289 FFHCY--CPVKFGRKADPNGDFI 309
CPV ++ DP G +I
Sbjct: 432 LDSSLVTCPVALAKRLDPEGVYI 454
>gi|157104635|ref|XP_001648498.1| DNA photolyase [Aedes aegypti]
gi|122106526|sp|Q17DK5.1|CRY1_AEDAE RecName: Full=Cryptochrome-1
gi|108880271|gb|EAT44496.1| AAEL004146-PA [Aedes aegypti]
Length = 545
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/325 (37%), Positives = 177/325 (54%), Gaps = 16/325 (4%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSP-SPAEAPVTPLLVRQA 59
M +K++ +L ++II NGG PLTY F V + P P AP + +
Sbjct: 126 MDVKCVEKVSHTLWDPQQIIRTNGGIPPLTYQMFLHTVDIIGKPPRPVAAPSFEFVEFGS 185
Query: 60 TTPLRDDHDEKYGVPTL--EELGFDIEG---LLPPTWKGGETEAMRRLERHL--ERKAWV 112
+ + V L E+ G EG + W GGET+A+ L L E +A++
Sbjct: 186 IPSILAQEVKLQQVRNLSPEDFGIYYEGNPDISHQQWMGGETKALECLGHRLKQEEEAFL 245
Query: 113 ASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK-----KAPPPLSLH 167
+ P L T +S LRFGCLS R+FY ++ LY++++ + P +
Sbjct: 246 GGYFLPTQAKPEFLVPPTSMSAALRFGCLSVRMFYWCVHDLYEKVQANNQYRNPGGQHIT 305
Query: 168 GQLLWREFFYCAATRNPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQ 226
GQL+WRE+FY + NP++ M NPIC+ IPW + ++L +W +TGFP IDA M Q
Sbjct: 306 GQLIWREYFYTMSVHNPHYAEMEANPICLNIPWYEPKDDSLDRWKEGRTGFPMIDAAMRQ 365
Query: 227 LREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFF 286
L EGW+HH+ R+ A FLTRG LW+SWE G++ F + LLDADWSV AG WMW+S S+F
Sbjct: 366 LLAEGWLHHILRNITATFLTRGALWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSSAFE 425
Query: 287 QQF--FHCYCPVKFGRKADPNGDFI 309
+ C P+ R+ DP G+++
Sbjct: 426 KLLDSSSCTSPIALARRLDPKGEYV 450
>gi|346975848|gb|EGY19300.1| cryptochrome-1 [Verticillium dahliae VdLs.17]
Length = 652
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 175/347 (50%), Gaps = 56/347 (16%)
Query: 16 SRRIIEKNGGKTPLTYHQFQS-----------IVAKMDSPSPAEAPVTPLLVRQATTP-- 62
S I+ NGGK ++ Q Q + A P P E PV R TTP
Sbjct: 139 SDDIVRANGGKPTMSMSQLQKAGSRVGDIPRPVAAPTKLPDPGEMPVDFEQERPNTTPDF 198
Query: 63 -----LRDDHDEKY----------GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLE 107
+ D+ Y G+ T+EELGF P +GGE+ A+ L+ ++
Sbjct: 199 NAAQRTAEAGDQGYASIAGPNGDFGIETMEELGF-PSATTP--HRGGESRALETLKEVMK 255
Query: 108 RKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAP--PPL 164
+ A+F +P+ +P + S T LSP + FG LS R FY K K PP
Sbjct: 256 DVKYAATFRKPQTSPAAFEPQSTTLLSPHMHFGSLSVREFYWQAVDAVKAFGKGASGPPE 315
Query: 165 SLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPW----DVNMEA------------- 206
SL GQLL+R+ ++ A A F++ GN C IPW VN E
Sbjct: 316 SLTGQLLFRDMYFAAQAALGYKFEQTRGNAYCRFIPWHLPSKVNTETGLITGEYHVDSEE 375
Query: 207 ----LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFD 262
+W QTGFPWIDA+M QL EEGWIHHL RH+VACFLTRG ++ WE G ++F+
Sbjct: 376 ADLWFRRWKAGQTGFPWIDALMRQLAEEGWIHHLGRHSVACFLTRGGCYIDWERGCEVFE 435
Query: 263 ELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
E L+D + + NAG W WLSC++FF Q+F CY PV FG+K D G F+
Sbjct: 436 EWLIDHEPACNAGNWQWLSCAAFFSQYFRCYSPVSFGQKWDKEGLFV 482
>gi|134082999|emb|CAK42762.1| unnamed protein product [Aspergillus niger]
Length = 567
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 178/312 (57%), Gaps = 22/312 (7%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQ--ATTPLRDDHDE 69
+L S ++++N G+ ++ HQ + + ++++ P P + +RD +
Sbjct: 138 TLFDSDEVVKQNKGEPTMSIHQVEKAIEQINNGVPDRPVDAPERIPDPLGEEKMRDISPK 197
Query: 70 -KYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLER-KAWVASFGRPKMTPQSLLA 127
+ +PTL+EL D P GGE+ A+ L +L++ + ++A+F +PK +P +
Sbjct: 198 GDFSIPTLDELSIDPSQATSPH-HGGESIALEMLTTYLQQNEDYIATFEKPKTSPAAFHP 256
Query: 128 SQTGL-SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-----LHGQLLWREFFYCA-A 180
T L SP L FG LS R F+HD+ ++ + A P S L GQLL+RE F+ A A
Sbjct: 257 QATTLLSPHLHFGSLSVRKFWHDVQDTLQQRESAHKPTSDLPTNLPGQLLFREMFFAAQA 316
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLA 237
P + + GN I V +A +W +TGFPWIDA+M QL+ EGWIHHL
Sbjct: 317 ALGPVYAQTRGNKI-------VRFQAEVWFRRWKEGRTGFPWIDALMRQLKNEGWIHHLG 369
Query: 238 RHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVK 297
RH+VACFLTRG +V WE G ++F+E L+D + + N G WMWLSC++FF Q+ CY PV
Sbjct: 370 RHSVACFLTRGGCYVHWERGAEVFEEWLIDHETASNVGNWMWLSCTAFFTQYNRCYSPVA 429
Query: 298 FGRKADPNGDFI 309
FG+K DP G FI
Sbjct: 430 FGKKWDPEGRFI 441
>gi|158301399|ref|XP_321104.4| AGAP001958-PA [Anopheles gambiae str. PEST]
gi|205696380|sp|Q7PYI7.4|CRY1_ANOGA RecName: Full=Cryptochrome-1; Short=agCRY1
gi|78191295|gb|ABB29886.1| cryptochrome 1 [Anopheles gambiae]
gi|157012451|gb|EAA01270.4| AGAP001958-PA [Anopheles gambiae str. PEST]
Length = 545
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 169/306 (55%), Gaps = 15/306 (4%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKM-DSPSPAEAPVTPLL-VRQATTPLRDDHDEKYGVPTL 76
+I+ NG PLTY F V + D P P AP + + L + +P
Sbjct: 146 VIQTNGDIPPLTYQMFLHTVNIIGDPPRPVGAPNFEYVEFGRVPALLASELKLCQQMPAP 205
Query: 77 EELGFDIEG---LLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPKMTPQSLLASQTG 131
++ G +G + W GGET A+ L L E +A+ + P +L T
Sbjct: 206 DDFGIHYDGNARIAFQKWIGGETRALEALGARLKQEEEAFREGYYLPTQAKPEILGPATS 265
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIK-----KAPPPLSLHGQLLWREFFYCAATRNPNF 186
+S LRFGCLS R+FY ++ L+ +++ K P + GQL+WRE+FY + +NP++
Sbjct: 266 MSAALRFGCLSVRMFYWCVHDLFAKVQSNSQFKYPGGHHITGQLIWREYFYTMSVQNPHY 325
Query: 187 DRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
M NPIC+ IPW ++L +W +TGFP IDA M QL EGW+HH+ R+ A FL
Sbjct: 326 GEMERNPICLNIPWYKPEDDSLTRWKEGRTGFPMIDAAMRQLLAEGWLHHILRNITATFL 385
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQF--FHCYCPVKFGRKAD 303
TRG LW+SWEEG++ F + LLDADWSV AG WMW+S S+F + C CP+ R+ D
Sbjct: 386 TRGGLWLSWEEGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSKCTCPIALARRLD 445
Query: 304 PNGDFI 309
P GD++
Sbjct: 446 PKGDYV 451
>gi|189188250|ref|XP_001930464.1| cryptochrome-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972070|gb|EDU39569.1| cryptochrome-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 655
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 188/356 (52%), Gaps = 60/356 (16%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQS-----------IVAKMDSPSPAEAPVTPLLV 56
K +L ++++N GK ++ Q Q+ I A P+P + +
Sbjct: 131 KTGRTLYDPDELVKQNHGKPTMSITQVQAAGKKIGRIPRPIPAPKSFPNPGDTDLKFDQE 190
Query: 57 RQATTP----LRDDHDE-----------KYGVPTLEELGFDIEGLLPPT--WKGGETEAM 99
R + P ++ D DE + VPT+EELG L P T +GGETEA+
Sbjct: 191 RPESQPDVNAIQRDGDEASYTALAGPNGDFAVPTMEELG-----LKPATTAHRGGETEAL 245
Query: 100 RRLERHLERKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFY---HDLNKLYK 155
R L+ + + + A+F +PK P + S T LSP + FG LS RLFY D+ +K
Sbjct: 246 RALDEIIANEEYTATFEKPKTAPTAFEPQSTTLLSPHMHFGSLSCRLFYWRAQDVVDKFK 305
Query: 156 RIKKAPPPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDV------------ 202
K + PP+SL GQLL+R+ ++ A A +F + NP C IPW +
Sbjct: 306 G-KASQPPVSLTGQLLFRDMYFGAQAALGYSFGQTYNNPNCRFIPWHLPSKIDTKSGLIT 364
Query: 203 ------NMEALA---KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
N EA A +W + QTGFPWIDA+M QL +EGWIHHL RHAVACFLTRG ++
Sbjct: 365 GEYMVDNAEAEAHFQRWKHGQTGFPWIDALMRQLAQEGWIHHLGRHAVACFLTRGGCYID 424
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE G ++F+E L+D + + N G W WLSC++FF QF+ CY P+ F +K D G +
Sbjct: 425 WERGAEVFEEWLIDHEAACNIGNWQWLSCTAFFAQFYRCYSPIAFPQKWDKEGKLV 480
>gi|194744725|ref|XP_001954843.1| GF16541 [Drosophila ananassae]
gi|190627880|gb|EDV43404.1| GF16541 [Drosophila ananassae]
Length = 542
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/332 (38%), Positives = 178/332 (53%), Gaps = 40/332 (12%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSP----------SPAEAPVTPLLV 56
+K++ +L + + +IE NGG PLTY F V + P + + P L+
Sbjct: 134 EKVSHTLWNPQSVIETNGGIPPLTYQMFLHTVQILGLPPRPVNDARLEDASFVQMDPELL 193
Query: 57 R------QATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHL--ER 108
R Q TP +H YG + +GF L W+GGE +A+ L+ L E+
Sbjct: 194 RNLGYLEQIPTP---EHFNVYG----DNMGF----LSKIRWRGGERQALLLLDERLKVEQ 242
Query: 109 KAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK--------KA 160
A+ + P ++ + +SP LRFGCLS R FY ++ L+K ++ +
Sbjct: 243 HAFEKGYYMPNQALPNIQETPKSMSPHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQM 302
Query: 161 PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEA-LAKWANAQTGFPW 219
+ GQL+WRE+FY + NPN+DRM GN IC+ IPW E L KW QTGFP
Sbjct: 303 TGGAHITGQLIWREYFYTMSVNNPNYDRMDGNEICLSIPWAKRDETQLQKWRLGQTGFPL 362
Query: 220 IDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW 279
IDA M QL EGW+HH+ R+ VA FLTRG LW SWE G++ F LLDADWSV AG WMW
Sbjct: 363 IDAAMRQLLAEGWLHHVLRNTVATFLTRGGLWQSWEHGVQHFLRYLLDADWSVCAGNWMW 422
Query: 280 LSCSSFFQQFFHCY--CPVKFGRKADPNGDFI 309
+S S+F + CPV ++ DP+G +I
Sbjct: 423 VSSSAFERLLDSSLVTCPVALAKRLDPDGAYI 454
>gi|169617021|ref|XP_001801925.1| hypothetical protein SNOG_11687 [Phaeosphaeria nodorum SN15]
gi|160703316|gb|EAT80731.2| hypothetical protein SNOG_11687 [Phaeosphaeria nodorum SN15]
Length = 1229
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/354 (37%), Positives = 181/354 (51%), Gaps = 56/354 (15%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDS-PSPAEAPVT-------------- 52
K+ +L ++++N GK ++ Q Q+ K+ + P P AP T
Sbjct: 698 KVGRTLYDPDELVKENNGKPTMSITQVQNAGKKIGAIPRPIPAPKTLPDPGKTDFNFDQE 757
Query: 53 -PLLVRQATTPLRDDHDEKY----------GVPTLEELGFDIEGLLPPTWKGGETEAMRR 101
P RD + Y VPT++ELG +GGET A++
Sbjct: 758 KPAQDPDINAVQRDGDEASYSTLAGPNGDFAVPTMQELGLKEATT---QHRGGETLALKT 814
Query: 102 LERHLERKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFY---HDLNKLYKRI 157
L+ + + A+F +PK P + S T LSP L FG LS R FY D+ +K
Sbjct: 815 LDETIANSEYTATFEKPKTAPTAFSPQSTTLLSPHLHFGSLSVREFYWRVQDIVTSFKG- 873
Query: 158 KKAPPPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDV--------NM---- 204
K + PP SL GQLL+R+ ++ A A +F + NP C IPW + N+
Sbjct: 874 KASQPPASLTGQLLFRDMYFGAQAALGYSFGQTYNNPACRFIPWHLPSAIDPATNLITGK 933
Query: 205 ----EALA-----KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
ALA +W + +TGFPWIDA+M QL EGWIHHL RHAVACFLTRG ++ WE
Sbjct: 934 YLVDSALAESHFQRWKHGRTGFPWIDALMRQLAREGWIHHLGRHAVACFLTRGGCYIDWE 993
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G ++F+E L+D + + N G W WLSC++FF QFF CY PV F K D NGDF+
Sbjct: 994 RGAEVFEEFLIDHESACNIGNWQWLSCTAFFAQFFRCYSPVAFPAKWDKNGDFV 1047
>gi|429854958|gb|ELA29939.1| DNA photolyase [Colletotrichum gloeosporioides Nara gc5]
Length = 445
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/266 (43%), Positives = 155/266 (58%), Gaps = 27/266 (10%)
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL- 126
D + + T+EELGF P +GGET+A+ LE L+ K + A+F +PK +P +
Sbjct: 35 DGDFAIETMEELGFP-SATTPH--RGGETKALAMLEEILKDKKYTATFEKPKTSPAAFEP 91
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPP-PLSLHGQLLWREFFYCA-ATRNP 184
S T LSPFL FG LS R FY + + K A P +L GQLL+R+ ++ A A
Sbjct: 92 QSTTLLSPFLHFGALSVREFYWRAKEGIDKYKGAAKIPENLLGQLLFRDMYFAAHAALGY 151
Query: 185 NFDRMLGNPICVQIPW------DVNM---------------EALAKWANAQTGFPWIDAI 223
F + NP C IPW D N E +W TGFPWIDA+
Sbjct: 152 KFTQTANNPYCRFIPWHLPSKVDSNTGLITGEYHVDSKQADEWFRRWKYGLTGFPWIDAL 211
Query: 224 MTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS 283
M Q+REEGWIHHL RH+VACFLTRG ++ WE G ++F+E L+D + + NAG W WLSC+
Sbjct: 212 MRQMREEGWIHHLGRHSVACFLTRGGCYIDWERGCEVFEEWLIDHEPAANAGNWQWLSCT 271
Query: 284 SFFQQFFHCYCPVKFGRKADPNGDFI 309
+FF Q+F CY PV FG+K D +GDF+
Sbjct: 272 AFFSQYFRCYSPVSFGQKWDKHGDFV 297
>gi|289741509|gb|ADD19502.1| deoxyribodipyrimidine photolyase/cryptochrome [Glossina morsitans
morsitans]
Length = 536
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/324 (39%), Positives = 175/324 (54%), Gaps = 24/324 (7%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMD-SPSPAEAP----VTPLLVRQATT 61
+K++ +L + R++I+ NGG PLTY F V + P PAE V L + +
Sbjct: 128 EKISHTLWNPRQVIQTNGGIPPLTYQMFLHTVQVIGLPPRPAENANWKGVDILNINETIL 187
Query: 62 PLRDDHDEKYGVPTLEELGF---DIEGLLPPTWKGGETEAMRRLERHL--ERKAWVASFG 116
E +P E+ D+ L WKGGETEA+ LE L E +A+ +
Sbjct: 188 EKLPGFTE---IPQPEQFNVFAEDLNRLALVKWKGGETEALILLEERLKVEGEAFKRGYY 244
Query: 117 RPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--------G 168
P ++L + +SP LRFGCLS R FY ++ L++ +++ G
Sbjct: 245 LPNQANPNILETPKSMSPHLRFGCLSVRKFYWAVHDLFEDVQQHVKMFGFQIMSGAHITG 304
Query: 169 QLLWREFFYCAATRNPNFDRMLGNPICVQIPWD-VNMEALAKWANAQTGFPWIDAIMTQL 227
QL+WRE+FY + NP +DRM N IC+ IPW VN E L W +TGFP +DA M QL
Sbjct: 305 QLIWREYFYTMSVNNPYYDRMEENEICLNIPWAPVNDEQLENWKLGKTGFPLVDAAMRQL 364
Query: 228 REEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQ 287
EGWIHH R+ VA FLTRG LW +WE G++ F + LLDADWSV AG WMW+S S+F +
Sbjct: 365 LAEGWIHHTLRNTVATFLTRGGLWFNWEHGLQHFLKYLLDADWSVCAGNWMWVSSSAFER 424
Query: 288 QFFH--CYCPVKFGRKADPNGDFI 309
CP+ ++ DP G +I
Sbjct: 425 LLDSSLVTCPLAMAKRLDPFGQYI 448
>gi|195353691|ref|XP_002043337.1| GM26830 [Drosophila sechellia]
gi|194127451|gb|EDW49494.1| GM26830 [Drosophila sechellia]
Length = 542
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 180/340 (52%), Gaps = 44/340 (12%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIV------------AKMDSPSPAE 48
+S +K++ +L + +IE NGG PLTY F V A++D + E
Sbjct: 128 LSIDFVEKVSHTLWDPQLVIETNGGIPPLTYQMFLHTVQIIGLPPRPTADARLDDATFVE 187
Query: 49 APVTPLLVR------QATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRL 102
+ P R Q TP +H YG + +GF L W+GGET+A+ L
Sbjct: 188 --LDPEFCRSLKLFDQLPTP---EHFNVYG----DNMGF----LAKINWRGGETQALLLL 234
Query: 103 ERHL--ERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK-- 158
+ L E+ A+ F P ++ S +S LRFGCLS R FY ++ L+K ++
Sbjct: 235 DERLKVEQHAFERGFYLPNQALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQLR 294
Query: 159 ------KAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW-DVNMEALAKWA 211
+ + GQL+WRE+FY + NPN+DRM GN IC+ IPW N + L +W
Sbjct: 295 ACVRGVQMTGGAHITGQLIWREYFYTMSVNNPNYDRMEGNEICLSIPWAKPNEDLLQRWR 354
Query: 212 NAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWS 271
QTGFP ID M QL EGW+HH R+ VA FLTRG LW SWE G++ F + LLDADWS
Sbjct: 355 LGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLLDADWS 414
Query: 272 VNAGMWMWLSCSSFFQQFFHCY--CPVKFGRKADPNGDFI 309
V AG WMW+S S+F + CPV ++ DP+G +I
Sbjct: 415 VCAGNWMWVSSSAFERLLDSSLVTCPVALAKRLDPDGTYI 454
>gi|195389935|ref|XP_002053627.1| GJ24000 [Drosophila virilis]
gi|194151713|gb|EDW67147.1| GJ24000 [Drosophila virilis]
Length = 539
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 173/321 (53%), Gaps = 18/321 (5%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMD-SPSPAEAP-VTPLLVRQATTPLR 64
+K++ +L R +I+ NGG PLTY F V + P P P + + Q LR
Sbjct: 134 EKVSHTLWDPRTVIDTNGGIAPLTYQMFLHTVQIIGLPPRPIPDPNFEGVSIAQLPQELR 193
Query: 65 DDHDEKYGVPTLEELGF--DIEGLLPP-TWKGGETEAMRRLERHL--ERKAWVASFGRPK 119
D PT E+ D G L W GGET+A+ L L E+ A+ + P
Sbjct: 194 KDIGCLEKTPTPEDFNIYSDNMGYLAKMNWIGGETQALSLLGERLKVEQHAFERGYYLPN 253
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK--------KAPPPLSLHGQLL 171
++L + +S LRFGCLS R FY ++ L+K ++ + + GQL+
Sbjct: 254 QALPNILETPKSMSAHLRFGCLSVRRFYWSMHDLFKNVQMRACVRGVQMTGGAHITGQLI 313
Query: 172 WREFFYCAATRNPNFDRMLGNPICVQIPWDV-NMEALAKWANAQTGFPWIDAIMTQLREE 230
WRE+FY + NP +DRM GN IC+ IPW + + L +W QTGFP ID+ M QL E
Sbjct: 314 WREYFYTMSVNNPQYDRMEGNEICLSIPWSKPDADQLQRWRLGQTGFPLIDSAMRQLLAE 373
Query: 231 GWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFF 290
GW+HH R+ VA FLTRG LW +WE G++ F + LLDADWSV AG WMW+S S+F +
Sbjct: 374 GWLHHTLRNTVATFLTRGGLWQNWELGLEHFLKYLLDADWSVCAGNWMWVSSSAFERLLD 433
Query: 291 HCY--CPVKFGRKADPNGDFI 309
CPV ++ DPNG +I
Sbjct: 434 SSLVTCPVALAKRLDPNGAYI 454
>gi|302417194|ref|XP_003006428.1| cryptochrome-1 [Verticillium albo-atrum VaMs.102]
gi|261354030|gb|EEY16458.1| cryptochrome-1 [Verticillium albo-atrum VaMs.102]
Length = 626
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/351 (37%), Positives = 176/351 (50%), Gaps = 56/351 (15%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQS-----------IVAKMDSPSPAEAPVTPLLVRQAT 60
+L S I+ NGGK ++ Q Q + A P P E PV R T
Sbjct: 135 TLWDSDDIVRANGGKPTMSMSQLQKAGSRVGDIPRPVAAPTKLPDPGEMPVDFEQERPDT 194
Query: 61 TP-------LRDDHDEKY----------GVPTLEELGFDIEGLLPPTWKGGETEAMRRLE 103
TP + D+ Y G+ T+EELGF P +GGE+ A+ L+
Sbjct: 195 TPDFNAAQRTVEAGDQGYASIAGPNGDFGIETMEELGFP-SATTPH--RGGESRALETLK 251
Query: 104 RHLERKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAP- 161
++ + A+F +P+ +P + S T LSP + FG LS R FY K K
Sbjct: 252 EVMKDVKYAATFRKPQTSPAAFEPQSTTLLSPHMHFGSLSVREFYWQAVDAVKAFGKGAS 311
Query: 162 -PPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPW----DVNMEA--------- 206
PP SL GQLL+R+ ++ A A F++ GN C IPW VN E
Sbjct: 312 GPPESLTGQLLFRDMYFAAQAALGYKFEQTRGNAYCRFIPWHLPSKVNTETGLITGQYHV 371
Query: 207 --------LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGM 258
+W QTGFPWIDA+M QL EEGWIHHL RH+VACFLTRG ++ WE G
Sbjct: 372 DSEEADLWFRRWKAGQTGFPWIDALMRQLAEEGWIHHLGRHSVACFLTRGGCYIDWERGC 431
Query: 259 KIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++F+E L+D + + NAG W WLSC++FF Q+F CY PV FG+K D G I
Sbjct: 432 EVFEEWLIDHEPACNAGNWQWLSCAAFFSQYFRCYSPVSFGQKWDKEGLLI 482
>gi|322698418|gb|EFY90188.1| cryptochrome-2 [Metarhizium acridum CQMa 102]
Length = 604
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 172/349 (49%), Gaps = 54/349 (15%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDS-----------PSPAEAPV-----TPLL 55
+L S I+ + GK ++ Q S K+ P P + P+ P
Sbjct: 126 TLWDSDEIVAHHDGKPTMSMTQLLSAAKKVGQVPRPIAAPKGLPDPGDMPLDFEQHVPSN 185
Query: 56 VRQATTPLRDDHDEKY----------GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERH 105
R+ D Y + TLEELGF ++GGE+ A++ L
Sbjct: 186 APDVNAQAREKKDTAYKSIAGPKGDFAIETLEELGFPAATT---PYRGGESIALKDLAEI 242
Query: 106 LERKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK--APP 162
+E K + A+F +PK +P S T LSPFL FG LS R FY + + + K + P
Sbjct: 243 IENKKYTATFEKPKTSPAQFEPQSTTLLSPFLHFGALSVREFYWRVQDVVEAYGKGASTP 302
Query: 163 PLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDVNMEA--------------- 206
P SL GQL++R+ ++ A A F + GNP C IPW + E
Sbjct: 303 PASLTGQLIFRDMYFAAQAAVGAKFTQTAGNPYCRFIPWHLPSERDSQTGLVTDKYKVDS 362
Query: 207 ------LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKI 260
+W TGFPWIDA+M QL GW+HHL RH+VACFLTRG +V WE G ++
Sbjct: 363 DDAEKWFQRWKRGVTGFPWIDALMRQLVHTGWMHHLGRHSVACFLTRGGCYVDWERGAEV 422
Query: 261 FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F+ LLD + + NAG W WLSC++FF Q+F CY PV FG+K D NGD I
Sbjct: 423 FEVHLLDHEPACNAGNWQWLSCTAFFSQYFRCYSPVSFGQKWDKNGDLI 471
>gi|322707152|gb|EFY98731.1| cryptochrome-2 [Metarhizium anisopliae ARSEF 23]
gi|374257344|gb|AEZ01569.1| (6-4)PP photolyase [Metarhizium robertsii]
Length = 566
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 173/350 (49%), Gaps = 56/350 (16%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDS-----------PSPAEAPV-----TPLL 55
+L S I+ + GK ++ Q S K+ P P + P+ P
Sbjct: 87 TLWDSDEIVAHHDGKPAMSMTQLLSAAKKVGQVPRPIAAPKSLPDPGDMPLDFGQHVPSS 146
Query: 56 VRQATTPLRDDHDEKY----------GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERH 105
V R+ D Y + TLEELGF ++GGE+ A++ L
Sbjct: 147 VPDVNAQTREKKDTAYKSIAGPKGDFAIETLEELGFPA---ATTPYRGGESIALKNLADI 203
Query: 106 LERKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFY---HDLNKLYKRIKKAP 161
+ K + A+F +PK +P S T LSPFL FG LS R FY D+ + Y + +
Sbjct: 204 AKNKKYTATFEKPKTSPAQFEPQSTTLLSPFLHFGALSVREFYWRVQDVVEAYGK-GAST 262
Query: 162 PPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDVNMEA-------------- 206
PP SL GQL++R+ ++ A A F + GNP C IPW + E
Sbjct: 263 PPASLTGQLIFRDMYFAAQAAVGAKFTQTAGNPYCRFIPWHLPSERDSQTGLVTDKYTVD 322
Query: 207 -------LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
+W TGFPWIDA+M QL GWIHHL RH++ACFLTRG +V WE G +
Sbjct: 323 SDDAEKWFQRWKRGVTGFPWIDALMRQLLHTGWIHHLGRHSLACFLTRGGCYVDWERGAE 382
Query: 260 IFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+F+ LLD + + NAG W WLSC++FF Q+F CY PV FG+K D NGD I
Sbjct: 383 VFEVHLLDHEPACNAGNWQWLSCTAFFSQYFRCYSPVSFGQKWDKNGDLI 432
>gi|121705010|ref|XP_001270768.1| DNA photolyase, putative [Aspergillus clavatus NRRL 1]
gi|119398914|gb|EAW09342.1| DNA photolyase, putative [Aspergillus clavatus NRRL 1]
Length = 613
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 178/354 (50%), Gaps = 64/354 (18%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQA------------------- 59
++ KNGGK ++ Q Q K+ +PA+ P V
Sbjct: 141 LVRKNGGKPTMSIAQVQKAAEKIGDGTPAQPLEAPQSVPDPWKWEKMGLDGLGQDVVDAR 200
Query: 60 ---TTPLRDDHDEKY----------GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHL 106
P R D +Y VPT+EE+G D P +GGET A+R L ++
Sbjct: 201 PDLNAPYRTSSDVQYSALMGPGRDFAVPTMEEIGIDGSLARSPH-RGGETAALRVLAGYI 259
Query: 107 ERKAWVASFGRPKMTPQSLLASQTG-LSPFLRFGCLSTRLFYHDLNKLYKRIKK-----A 160
+ +V +F +PK +P + T LSP L FG LS R F+ D+ + ++ +K A
Sbjct: 260 QDGEYVGTFEKPKTSPAAFEPQATTLLSPHLHFGSLSVRKFWWDVQGVLQQRRKQKKANA 319
Query: 161 PPPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDVNMEALA----------- 208
P +L GQLL+R+ ++ A A F + LGN I W + +
Sbjct: 320 SIPTNLPGQLLFRDMYFAAQAAIGHAFGQTLGNKYVRFIDWHLPTNYITTEEGKYQPDGT 379
Query: 209 -------------KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
+W +TGFPWIDA+M QL+ EGWIHHL RH+VACFLTRG +VSWE
Sbjct: 380 YTVDSSEAENWFRRWKEGRTGFPWIDALMRQLKLEGWIHHLGRHSVACFLTRGGCYVSWE 439
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G ++F++ L+D + + N G W WLSC++F+ Q++HCY P+ FG+K DP G+F+
Sbjct: 440 RGAEVFEDWLVDHETACNVGNWQWLSCTAFYSQYYHCYSPIAFGKKWDPEGEFV 493
>gi|3986298|dbj|BAA35000.1| blue light photoreceptor [Drosophila melanogaster]
Length = 542
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/332 (38%), Positives = 173/332 (52%), Gaps = 40/332 (12%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV--------------- 51
+K++ +L + +IE NGG PLTY F V + P A
Sbjct: 134 EKVSHTLWDPQLVIETNGGIPPLTYQMFLHTVQIIGLPPRPTADARLEDATFVELDPEFC 193
Query: 52 -TPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHL--ER 108
+ L Q TP +H YG + +GF L W+GGET+A+ L+ L E+
Sbjct: 194 RSLKLFEQLPTP---EHFNVYG----DNMGF----LAKINWRGGETQALHLLDERLKVEQ 242
Query: 109 KAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK--------KA 160
A+ F P ++ S +S LRFGCLS R FY ++ L+K ++ +
Sbjct: 243 HAFERGFYLPNQALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQM 302
Query: 161 PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPW 219
+ GQL+WRE+FY + NPN+DRM GN IC+ IPW N + L W QTGFP
Sbjct: 303 TGGAHITGQLIWREYFYTMSVNNPNYDRMEGNEICLSIPWAKPNEDLLQSWRLGQTGFPL 362
Query: 220 IDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW 279
ID M QL EGW+HH R+ VA FLTRG LW SWE G++ F + LLDADWSV AG WMW
Sbjct: 363 IDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMW 422
Query: 280 LSCSSFFQQFFH--CYCPVKFGRKADPNGDFI 309
+S S+F + CPV ++ DP+G +I
Sbjct: 423 VSSSAFERLLDSSLVTCPVALAKRLDPDGTYI 454
>gi|195569723|ref|XP_002102858.1| GD19278 [Drosophila simulans]
gi|194198785|gb|EDX12361.1| GD19278 [Drosophila simulans]
Length = 542
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 178/338 (52%), Gaps = 40/338 (11%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIV------------AKMDSPSPAE 48
+S +K++ +L + +IE NGG PLTY F V A++D + E
Sbjct: 128 LSIDFVEKVSHTLWDPQLVIETNGGIPPLTYQMFLHTVQIIGLPPRPTADARLDDATFVE 187
Query: 49 AP----VTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLER 104
+ L Q P +H YG + +GF L W+GGET+A+ L+
Sbjct: 188 LEPEFCRSLKLFEQLPMP---EHFNVYG----DNMGF----LAKINWRGGETQALLLLDE 236
Query: 105 HL--ERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK---- 158
L E+ A+ F P ++ S +S LRFGCLS R FY ++ L+K ++
Sbjct: 237 RLKVEQHAFERGFYLPNQALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQLRAC 296
Query: 159 ----KAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW-DVNMEALAKWANA 213
+ + GQL+WRE+FY + NPN+DRM GN IC+ IPW N + L +W
Sbjct: 297 VRGVQMTGGAHITGQLIWREYFYTMSVNNPNYDRMEGNEICLSIPWAKPNEDLLQRWRLG 356
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
QTGFP ID M QL EGW+HH R+ VA FLTRG LW SWE G++ F + LLDADWSV
Sbjct: 357 QTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLLDADWSVC 416
Query: 274 AGMWMWLSCSSFFQQFFHCY--CPVKFGRKADPNGDFI 309
AG WMW+S S+F + CPV ++ DP+G +I
Sbjct: 417 AGNWMWVSSSAFERLLDSSLVTCPVALAKRLDPDGTYI 454
>gi|195107460|ref|XP_001998330.1| GI23904 [Drosophila mojavensis]
gi|193914924|gb|EDW13791.1| GI23904 [Drosophila mojavensis]
Length = 539
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/321 (39%), Positives = 172/321 (53%), Gaps = 18/321 (5%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMD-SPSPAEAP-VTPLLVRQATTPLR 64
+K++ +L R +I+ NGG PLTY F V + P P P + Q + LR
Sbjct: 134 EKVSHTLWDPRTVIDTNGGIAPLTYQMFLHTVQIIGLPPRPVRDPNFEGVKFVQLSPELR 193
Query: 65 DDHDEKYGVPTLEELGF--DIEGLLPP-TWKGGETEAMRRLERHL--ERKAWVASFGRPK 119
D PT E D G L W GGET+A+ L L E+ A+ + P
Sbjct: 194 HDIGCFEMTPTPEHFNVYSDNMGYLAKINWVGGETQALLLLGERLKVEQHAFERGYYLPN 253
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK--------KAPPPLSLHGQLL 171
++L + +S LRFGCLS R FY ++ L+K ++ + + GQL+
Sbjct: 254 QAMPNILDTPKSMSAHLRFGCLSVRRFYWCMHDLFKNVQLRACVRGVQMSGGAHITGQLI 313
Query: 172 WREFFYCAATRNPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREE 230
WRE+FY + NP +DRM GN IC+ IPW + E L +W QTGFP ID+ M QL E
Sbjct: 314 WREYFYTMSVNNPQYDRMEGNEICLSIPWAKPDAEQLQRWRLGQTGFPLIDSAMRQLLAE 373
Query: 231 GWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFF 290
GW+HH R+ VA FLTRG LW +WE G++ F + LLDADWSV AG WMW+S S+F +
Sbjct: 374 GWLHHTLRNTVATFLTRGGLWQNWEFGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLD 433
Query: 291 HCY--CPVKFGRKADPNGDFI 309
CPV ++ DPNG +I
Sbjct: 434 SSLVTCPVALAKRLDPNGQYI 454
>gi|425767796|gb|EKV06352.1| DNA photolyase, putative [Penicillium digitatum Pd1]
gi|425769478|gb|EKV07970.1| DNA photolyase, putative [Penicillium digitatum PHI26]
Length = 604
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 182/361 (50%), Gaps = 60/361 (16%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLV----------- 56
K+ +L ++ KN GK ++ Q + K+++ +P + +P +
Sbjct: 136 KMGRTLFDPDDVVRKNNGKPTMSITQLEKAAVKINNGNPEKPLDSPNSIPDPWDEERMDL 195
Query: 57 ---RQATTPLRDDHDEKYGVPTLEE-----------------LGFDIEGLLPPTWKGGET 96
++ + R D + +Y T E+ +G D+ P +GGE
Sbjct: 196 SSLKRESIENRPDLNAEYRTKTDEQFADLMGPSRDFAVPWQDIGIDLSQATTPH-RGGEQ 254
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFYHDLNKLYK 155
EA+R L ++ + ++ F +P +P S T LSP L FG LS R F+ D+ +
Sbjct: 255 EALRILGECIKNEDYIGRFEKPNTSPADFEPQSTTLLSPHLHFGSLSVRKFWWDVEGVLN 314
Query: 156 RIKKAPPPLS-----LHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDVNM----- 204
+ +KA P+S L GQLL+R+ ++ A A F R GN I I W +
Sbjct: 315 KHRKAKKPVSTVPTNLPGQLLFRDMYFAAQAPLGHAFSRTYGNEIARFIDWHLQTNPPSQ 374
Query: 205 ----------------EALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
E +W + +TGFPWIDA+M QLR+EGWIHHL RH+VACFLTRG
Sbjct: 375 DGSIEGSYEVDSQEAEEWFQRWKDGRTGFPWIDALMRQLRQEGWIHHLGRHSVACFLTRG 434
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
+VSWE G +F+ELL+D + + N G WMWLSC++FF QF+ CY P+ FG+K DP G
Sbjct: 435 GCYVSWERGAAVFEELLIDHEVACNVGNWMWLSCTAFFAQFYRCYSPIAFGKKWDPEGSL 494
Query: 309 I 309
I
Sbjct: 495 I 495
>gi|451997801|gb|EMD90266.1| hypothetical protein COCHEDRAFT_1139413, partial [Cochliobolus
heterostrophus C5]
Length = 650
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 179/345 (51%), Gaps = 60/345 (17%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDS-PSPAEAPVT---------------PLLVRQATTP 62
+++ N GK ++ Q Q+ K+ P P AP T P +
Sbjct: 142 LVKNNNGKPTMSMAQVQAAAKKIGPVPRPIPAPKTLPDPGEVHLEFDQEKPESQPDINSI 201
Query: 63 LRDDHDEKY----------GVPTLEELGFDIEGLLPPT--WKGGETEAMRRLERHLERKA 110
RD + Y VPT+EELG L P T +GGET A++ L++ + +
Sbjct: 202 QRDGKEASYTALAGPNGDFAVPTMEELG-----LKPATTPHRGGETIALQALDKIIANEK 256
Query: 111 WVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFY---HDLNKLYKRIKKAPPPLSL 166
+ A+F +P P + S T LSP + FG LS RLFY D+ YK K + PP SL
Sbjct: 257 YTATFEKPNTAPTAFEPQSTTLLSPHMHFGSLSCRLFYWRAQDVADKYKG-KASQPPTSL 315
Query: 167 HGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDV------------------NMEA- 206
GQLL+R+ ++ A A+ +F + N C IPW + N EA
Sbjct: 316 TGQLLFRDMYFGAQASLGYSFGQTYNNSHCRFIPWHLPSKIDASSGLITGEYTIDNAEAE 375
Query: 207 --LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDEL 264
+W +TGFPWIDA+M QL +EGWIHHL RHAVACFLTRG ++ WE G ++F+E
Sbjct: 376 SHFQRWKQGRTGFPWIDALMRQLAQEGWIHHLGRHAVACFLTRGGCYIDWERGAEVFEEW 435
Query: 265 LLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L+D + + N G W WLSC++FF QF+ CY PV F +K D G+FI
Sbjct: 436 LIDHEAACNIGNWQWLSCTAFFAQFYRCYSPVAFPQKWDKEGNFI 480
>gi|24648152|ref|NP_732407.1| cryptochrome [Drosophila melanogaster]
gi|74960862|sp|O77059.1|CRY1_DROME RecName: Full=Cryptochrome-1; Short=DmCRY1; Short=dcry; AltName:
Full=Blue light photoreceptor
gi|3724370|dbj|BAA33787.1| blue-light receptor [Drosophila melanogaster]
gi|3983154|gb|AAC83828.1| cryptochrome [Drosophila melanogaster]
gi|7300494|gb|AAF55649.1| cryptochrome [Drosophila melanogaster]
gi|15291339|gb|AAK92938.1| GH16672p [Drosophila melanogaster]
gi|220945540|gb|ACL85313.1| cry-PA [synthetic construct]
gi|220955344|gb|ACL90215.1| cry-PA [synthetic construct]
Length = 542
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/332 (38%), Positives = 172/332 (51%), Gaps = 40/332 (12%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV--------------- 51
+K++ +L + +IE NGG PLTY F V + P A
Sbjct: 134 EKVSHTLWDPQLVIETNGGIPPLTYQMFLHTVQIIGLPPRPTADARLEDATFVELDPEFC 193
Query: 52 -TPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHL--ER 108
+ L Q TP +H YG + +GF L W+GGET+A+ L+ L E+
Sbjct: 194 RSLKLFEQLPTP---EHFNVYG----DNMGF----LAKINWRGGETQALLLLDERLKVEQ 242
Query: 109 KAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK--------KA 160
A+ F P ++ S +S LRFGCLS R FY ++ L+K ++ +
Sbjct: 243 HAFERGFYLPNQALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQM 302
Query: 161 PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPW 219
+ GQL+WRE+FY + NPN+DRM GN IC+ IPW N L W QTGFP
Sbjct: 303 TGGAHITGQLIWREYFYTMSVNNPNYDRMEGNDICLSIPWAKPNENLLQSWRLGQTGFPL 362
Query: 220 IDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW 279
ID M QL EGW+HH R+ VA FLTRG LW SWE G++ F + LLDADWSV AG WMW
Sbjct: 363 IDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMW 422
Query: 280 LSCSSFFQQFFHCY--CPVKFGRKADPNGDFI 309
+S S+F + CPV ++ DP+G +I
Sbjct: 423 VSSSAFERLLDSSLVTCPVALAKRLDPDGTYI 454
>gi|406867153|gb|EKD20192.1| cryptochrome-2 [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 650
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 179/349 (51%), Gaps = 54/349 (15%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDS-PSPAEAPVTPLLVRQATTPLRDDHDEK 70
+L S +++KN GK ++ Q Q+ K+ P P AP + + + H E+
Sbjct: 135 TLWDSDELVKKNRGKPTMSISQVQAAGPKVGPIPRPIPAPESIPDPGETSLDFEQHHPER 194
Query: 71 -------------------------YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERH 105
+ PTLEELGF +GGET A++ L++
Sbjct: 195 DPDFNRRTREKSDKSYESIAGPNGDFAPPTLEELGFPA---ATTPHRGGETVALKALDKL 251
Query: 106 LERKAWVASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI--KKAPP 162
+ + + A+F +P P + S T LSP L FG L R FY + + K + P
Sbjct: 252 IANEKYTATFEKPNTAPTAFEPQSTTLLSPHLHFGSLGIREFYWRVQDVVDSFSGKASGP 311
Query: 163 PLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPW----DVNMEA----------- 206
P+SL GQLL+R+ ++ A A+ F + + N C IPW VN +
Sbjct: 312 PVSLTGQLLFRDMYFGAQASLGYAFGQTMYNSHCRFIPWHLPSKVNHDTKLVMGEYHIDS 371
Query: 207 ------LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKI 260
+W N TGFPWIDA+M QL++EGWIHHL RHAVACFLTRG ++SWE G ++
Sbjct: 372 PQAEEWFQRWKNGVTGFPWIDALMRQLKQEGWIHHLGRHAVACFLTRGGCYISWERGAEV 431
Query: 261 FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F+ELLLD + + NAG W WLSC++FF QF+ CY PV F +K D G F+
Sbjct: 432 FEELLLDHETACNAGNWQWLSCTAFFAQFYRCYSPVAFPQKWDKEGKFV 480
>gi|406855882|pdb|4GU5|A Chain A, Structure Of Full-Length Drosophila Cryptochrome
gi|406855883|pdb|4GU5|B Chain B, Structure Of Full-Length Drosophila Cryptochrome
Length = 539
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/332 (38%), Positives = 172/332 (51%), Gaps = 40/332 (12%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV--------------- 51
+K++ +L + +IE NGG PLTY F V + P A
Sbjct: 134 EKVSHTLWDPQLVIETNGGIPPLTYQMFLHTVQIIGLPPRPTADARLEDATFVELDPEFC 193
Query: 52 -TPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHL--ER 108
+ L Q TP +H YG + +GF L W+GGET+A+ L+ L E+
Sbjct: 194 RSLKLFEQLPTP---EHFNVYG----DNMGF----LAKINWRGGETQALLLLDERLKVEQ 242
Query: 109 KAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK--------KA 160
A+ F P ++ S +S LRFGCLS R FY ++ L+K ++ +
Sbjct: 243 HAFERGFYLPNQALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQM 302
Query: 161 PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPW 219
+ GQL+WRE+FY + NPN+DRM GN IC+ IPW N L W QTGFP
Sbjct: 303 TGGAHITGQLIWREYFYTMSVNNPNYDRMEGNDICLSIPWAKPNENLLQSWRLGQTGFPL 362
Query: 220 IDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW 279
ID M QL EGW+HH R+ VA FLTRG LW SWE G++ F + LLDADWSV AG WMW
Sbjct: 363 IDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMW 422
Query: 280 LSCSSFFQQFFHCY--CPVKFGRKADPNGDFI 309
+S S+F + CPV ++ DP+G +I
Sbjct: 423 VSSSAFERLLDSSLVTCPVALAKRLDPDGTYI 454
>gi|396460940|ref|XP_003835082.1| hypothetical protein LEMA_P072250.1 [Leptosphaeria maculans JN3]
gi|312211632|emb|CBX91717.1| hypothetical protein LEMA_P072250.1 [Leptosphaeria maculans JN3]
Length = 709
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 151/264 (57%), Gaps = 28/264 (10%)
Query: 71 YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+ VPT++ELG L T +GGET A+ LE+ + + + A+F +PK P + T
Sbjct: 266 FAVPTMKELGLK---LATSTHRGGETLALEALEKIIANEEYTATFEKPKTAPTAFEPQAT 322
Query: 131 GL-SPFLRFGCLSTRLFYHDLNKLYKRIK--KAPPPLSLHGQLLWREFFYCA-ATRNPNF 186
L SP L FG LS R FY + + R K + PP SL GQLL+R+ ++ A A +F
Sbjct: 323 TLLSPHLHFGSLSCREFYWRVQDVVDRFKGKASQPPTSLTGQLLFRDMYFGAQAALGYSF 382
Query: 187 DRMLGNPICVQIPWDV------------------NMEA---LAKWANAQTGFPWIDAIMT 225
+ NP C IPW + + EA +W TGFPWIDA+M
Sbjct: 383 SQTYNNPQCRFIPWHLPSKIDIKSSMTTGEYLVDDAEAEIHFKRWKEGCTGFPWIDALMR 442
Query: 226 QLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF 285
QL+ EGWIHHL RHAVACFLTRG ++ WE G ++F+E L+D + + N G W WLSC++F
Sbjct: 443 QLKREGWIHHLGRHAVACFLTRGGCYIDWERGAEVFEEWLIDHEAACNIGNWQWLSCTAF 502
Query: 286 FQQFFHCYCPVKFGRKADPNGDFI 309
F QFF CY P+ F +K D G+F+
Sbjct: 503 FAQFFRCYSPIAFPQKWDKEGEFV 526
>gi|195497880|ref|XP_002096288.1| GE25590 [Drosophila yakuba]
gi|194182389|gb|EDW96000.1| GE25590 [Drosophila yakuba]
Length = 542
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 128/324 (39%), Positives = 169/324 (52%), Gaps = 24/324 (7%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDD 66
+K++ +L + +IE NGG PLTY F V + P P + AT D
Sbjct: 134 EKVSHTLWDPQLVIETNGGIPPLTYQMFLHTVQIIGLPP---RPTADARLEDATFVELDS 190
Query: 67 HD-------EKYGVPTLEELGFDIEGLLPP-TWKGGETEAMRRLERHL--ERKAWVASFG 116
EK P + D G L W+GGET+A+ L+ L E+ A+ F
Sbjct: 191 EFCRSLNLFEKLPAPDHFNVYTDNMGFLAKINWRGGETQALLLLDERLKVEQHAFERGFY 250
Query: 117 RPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK--------KAPPPLSLHG 168
P ++ S +S LRFGCLS R FY ++ L+K ++ + L G
Sbjct: 251 LPNQALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQMTGGAHLTG 310
Query: 169 QLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNME-ALAKWANAQTGFPWIDAIMTQL 227
QL+WRE+FY + NPN+DRM GN IC+ IPW E L +W QTGFP ID M QL
Sbjct: 311 QLIWREYFYTMSVNNPNYDRMEGNEICLSIPWAKPKEDLLQRWRLGQTGFPLIDGAMRQL 370
Query: 228 REEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQ 287
EGW+HH R+ VA FLTRG LW SWE G++ F + LLDADWSV AG WMW+S S+F +
Sbjct: 371 LAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSSAFER 430
Query: 288 QFFHCY--CPVKFGRKADPNGDFI 309
CPV ++ DP G +I
Sbjct: 431 LLDSSLVTCPVALAKRLDPEGTYI 454
>gi|340518659|gb|EGR48899.1| DNA photolyase [Trichoderma reesei QM6a]
Length = 628
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/266 (42%), Positives = 156/266 (58%), Gaps = 32/266 (12%)
Query: 71 YGVPTLEELGFDIEGLLPPTW--KGGETEAMRRLERHLERKAWVASFGRPKMTP-QSLLA 127
+ + TLEELGF P T +GGET A+ RL+ ++ K ++A+F +PK +P Q
Sbjct: 220 FAIETLEELGF-----APATTPIRGGETLALERLDELIKDKTYIATFKKPKTSPAQFDPP 274
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK--KAPPPLSLHGQLLWREFFYCA-ATRNP 184
+ T LSPF FG LS RLFYH + ++ + PP SL GQ+L+R+ ++ A A
Sbjct: 275 ATTLLSPFFHFGALSVRLFYHRVQEVIDSFGPGASSPPESLIGQVLFRDMYFAAQAALGA 334
Query: 185 NFDRMLGNPICVQIPW---------------DVNMEA------LAKWANAQTGFPWIDAI 223
+F + NP C +PW D ++++ +W TGFPWIDA+
Sbjct: 335 SFAQTATNPYCRFVPWHLPSKRDPHTGLTTGDHHIDSDQAETWFRRWKAGTTGFPWIDAL 394
Query: 224 MTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS 283
M QLR +GWIHHL RH+VACFLTRG +V WE G ++F+ELLLD + + N G W WLSC
Sbjct: 395 MRQLRHDGWIHHLGRHSVACFLTRGGCYVDWERGAEVFEELLLDHEPACNIGNWQWLSCV 454
Query: 284 SFFQQFFHCYCPVKFGRKADPNGDFI 309
+FF Q++ Y PV FG+K D +G I
Sbjct: 455 AFFAQYYRVYSPVSFGQKWDRDGALI 480
>gi|317036499|ref|XP_001397458.2| DNA photolyase [Aspergillus niger CBS 513.88]
Length = 641
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/361 (34%), Positives = 183/361 (50%), Gaps = 64/361 (17%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQ--ATTPLRD---- 65
+L S ++++N G+ ++ HQ + + ++++ P P + +RD
Sbjct: 138 TLFDSDEVVKQNKGEPTMSIHQVEKAIEQINNGVPDRPVDAPERIPDPLGEEKMRDISGL 197
Query: 66 -----DHDEK-----------------------YGVPTLEELGFDIEGLLPPTWKGGETE 97
DH++ + +PTL+EL D P GGE+
Sbjct: 198 EHEVPDHEDDINAAHRTKHNDNQYNNIAGPKGDFSIPTLDELSIDPSQATSPH-HGGESI 256
Query: 98 AMRRLERHLER-KAWVASFGRPKMTPQSLLASQTGL-SPFLRFGCLSTRLFYHDLNKLYK 155
A+ L +L++ + ++A+F +PK +P + T L SP L FG LS R F+HD+ +
Sbjct: 257 ALEMLTTYLQQNEDYIATFEKPKTSPAAFHPQATTLLSPHLHFGSLSVRKFWHDVQDTLQ 316
Query: 156 RIKKAPPPLS-----LHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPW--------- 200
+ + A P S L GQLL+RE F+ A A P + + GN I +PW
Sbjct: 317 QRESAHKPTSDLPTNLPGQLLFREMFFAAQAALGPVYAQTRGNKIVRFVPWHLQSNHDKE 376
Query: 201 -----------DVNMEA-LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
D E +W +TGFPWIDA+M QL+ EGWIHHL RH+VACFLTRG
Sbjct: 377 TGLVDRTYTVDDEQAEVWFRRWKEGRTGFPWIDALMRQLKNEGWIHHLGRHSVACFLTRG 436
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
+V WE G ++F+E L+D + + N G WMWLSC++FF Q+ CY PV FG+K DP G F
Sbjct: 437 GCYVHWERGAEVFEEWLIDHETASNVGNWMWLSCTAFFTQYNRCYSPVAFGKKWDPEGRF 496
Query: 309 I 309
I
Sbjct: 497 I 497
>gi|350633368|gb|EHA21733.1| Hypothetical protein ASPNIDRAFT_184343 [Aspergillus niger ATCC
1015]
Length = 640
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 154/270 (57%), Gaps = 30/270 (11%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLER-KAWVASFGRPKMTPQSLLA 127
+ + VPTL+EL D P GGE+ A+ L +L++ + ++A+F +PK +P +
Sbjct: 229 DDFSVPTLDELSIDPSQATSPH-HGGESIALEMLTTYLQQNEDFIATFEKPKTSPAAFHP 287
Query: 128 SQTGL-SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-----LHGQLLWREFFYCA-A 180
T L SP L FG LS R F+HD+ ++ + A P S L GQLL+RE F+ A A
Sbjct: 288 QATTLLSPHLHFGSLSVRKFWHDVQDTLQQHESAHKPTSDLPTNLPGQLLFREMFFAAQA 347
Query: 181 TRNPNFDRMLGNPICVQIPW--------------------DVNMEA-LAKWANAQTGFPW 219
P + + GN I +PW D E +W +TGFPW
Sbjct: 348 ALGPVYAQTRGNKIVRFVPWHLQSNHDKETGLVDRTYTVDDEQAEVWFRRWKEGRTGFPW 407
Query: 220 IDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW 279
IDA+M QL+ EGWIHHL RH+VACFLTRG +V WE G ++F+E L+D + + N G WMW
Sbjct: 408 IDALMRQLKNEGWIHHLGRHSVACFLTRGGCYVHWERGAEVFEEWLIDHETASNVGNWMW 467
Query: 280 LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LSC++FF Q+ CY PV FG+K DP G F+
Sbjct: 468 LSCTAFFTQYNRCYSPVAFGKKWDPEGRFV 497
>gi|47212597|emb|CAF93039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 127/182 (69%), Gaps = 1/182 (0%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RI+E N PLT+ +FQ+IV++++ P VT + + TP+ D+HD+ Y +P+LE
Sbjct: 173 RIVEMNNNSPPLTFKRFQTIVSRLELPRRPLPSVTQQQMDKCGTPVADNHDQLYSIPSLE 232
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF GL P W+GGE+EA+ RL +HLE+K WV+ + SL AS GLSP+LR
Sbjct: 233 ELGFRTGGLAPAVWRGGESEALERLRKHLEKKVWVSHLEHSRANTCSLYASPAGLSPYLR 292
Query: 138 FGCLSTRLFYHDLNKLYKRI-KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS R+FY++L + Y R+ K PPLSL GQLLWREFFY AAT NPNFDRM GNPICV
Sbjct: 293 FGCLSCRVFYYNLREHYIRLCKGCSPPLSLFGQLLWREFFYTAATNNPNFDRMAGNPICV 352
Query: 197 QI 198
Q+
Sbjct: 353 QV 354
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 67/94 (71%), Gaps = 21/94 (22%)
Query: 237 ARHAVACFLTRGDLWVSWEEGMKI---------------------FDELLLDADWSVNAG 275
AR AVACFLTRGDLW+SWE GMK+ F+ELLLDADWSVNAG
Sbjct: 453 ARRAVACFLTRGDLWISWECGMKVGGAAWSRRRRRRLSARLLPQVFEELLLDADWSVNAG 512
Query: 276 MWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WMWLSCS+FFQQFF CYCPV FGR+ DP+GD+I
Sbjct: 513 SWMWLSCSAFFQQFFKCYCPVGFGRRTDPSGDYI 546
>gi|451847270|gb|EMD60578.1| hypothetical protein COCSADRAFT_244496 [Cochliobolus sativus
ND90Pr]
Length = 654
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 178/343 (51%), Gaps = 56/343 (16%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDS-PSPAEAPVT---------------PLLVRQATTP 62
+++ N GK ++ Q Q+ K+ P P AP + P +
Sbjct: 142 LVKNNNGKPTMSMAQVQAAAKKIGPVPRPIPAPKSLPDPGEVHLQFDQEKPESHPDINSI 201
Query: 63 LRDDHDEKY----------GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWV 112
RD ++ Y VPT+E+LG L +GGET A++ L++ + + +
Sbjct: 202 QRDGNEASYTALAGPNGDFAVPTMEDLGLK---LATTPHRGGETVALQALDKIIADEEYT 258
Query: 113 ASFGRPKMTPQSLL-ASQTGLSPFLRFGCLSTRLFY---HDLNKLYKRIKKAPPPLSLHG 168
A+F +P P + S T LSP + FG LS RLFY D+ YK + + PP SL G
Sbjct: 259 ATFEKPNTAPTAFEPQSTTLLSPHMHFGSLSCRLFYWRAQDVADKYKG-RASQPPTSLTG 317
Query: 169 QLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDV------------------NMEA--- 206
QLL+R+ ++ A A+ +F + N C IPW + N EA
Sbjct: 318 QLLFRDMYFGAQASLGYSFGQTYNNSHCRFIPWHLPSKVDTSSSLITGEYTIDNAEAESH 377
Query: 207 LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLL 266
+W +TGFPWIDA+M QL +EGWIHHL RHAVACFLTRG ++ WE G ++F+E L+
Sbjct: 378 FQRWKQGRTGFPWIDALMRQLAQEGWIHHLGRHAVACFLTRGGCYIDWERGAEVFEEWLI 437
Query: 267 DADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
D + + N G W WLSC++FF QF+ CY PV F +K D G+FI
Sbjct: 438 DHEAACNIGNWQWLSCTAFFAQFYRCYSPVAFPQKWDKEGNFI 480
>gi|392574712|gb|EIW67847.1| hypothetical protein TREMEDRAFT_21150, partial [Tremella
mesenterica DSM 1558]
Length = 548
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 171/339 (50%), Gaps = 58/339 (17%)
Query: 23 NGGKTPLTYHQFQSI---VAKMDSPS------PAEAPVTPLLVRQA--------TTPLRD 65
NGGK +T Q+Q+I + K++ PS P T R+ LR
Sbjct: 143 NGGKPTMTLQQWQNITKKIGKVEQPSLTPTILPDPGETTLRYSRKVYKWDKVDLNAHLRT 202
Query: 66 DHDE----------KYGVPTLEELGFDIEGLLPPT---WKGGETEAMRRLERHLERKAWV 112
D + VPTL ++G+ PP+ +GG T+A RL L V
Sbjct: 203 GKDTCFDHFTGPEGDFSVPTLSQMGY------PPSTTSIRGGTTQAHLRLNTFLSHPQAV 256
Query: 113 ASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK--KAPPPLSLHGQL 170
A+F +P P +L S T LSP+L+FGC+ R + ++ + K K P ++ GQL
Sbjct: 257 ATFSKPHTAPTALEPSTTLLSPYLKFGCVGVREIWWGCKRVVEAYKGEKTKEPENMFGQL 316
Query: 171 LWREFFYCAATRNPNFDRMLGNPICVQIPWDVNME--------------------ALAKW 210
+R+ + CA P+F+R+ GN +C I W + + W
Sbjct: 317 EFRDMYACAEALQPHFERIRGNSVCRYIDWGLQNQYDEQGREILPRPRGKEEDERRFEAW 376
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
TGFPWIDA M QL+ EGWIHHLARH+VACFLTRG ++SWE GM++FDE L+D D
Sbjct: 377 REGCTGFPWIDACMRQLKSEGWIHHLARHSVACFLTRGQCYISWERGMEVFDEWLIDWDP 436
Query: 271 SVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G WMWLSCS+FF Q++ Y V + +K D G +
Sbjct: 437 ASNPGNWMWLSCSAFFSQYYRVYGLVSWPQKTDKTGALV 475
>gi|195055524|ref|XP_001994667.1| GH17366 [Drosophila grimshawi]
gi|193892430|gb|EDV91296.1| GH17366 [Drosophila grimshawi]
Length = 539
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 165/311 (53%), Gaps = 18/311 (5%)
Query: 17 RRIIEKNGGKTPLTYHQFQSIVAKMD-SPSPAEAP-VTPLLVRQATTPLRDDHDEKYGVP 74
R +I+ NGG PLTY F V + P P P + Q + +R + P
Sbjct: 144 RTVIDTNGGIAPLTYQMFLHTVHIIGLPPRPVHDPQFDGVGFVQLSAEMRREIGCLEKTP 203
Query: 75 TLEELGF---DIEGLLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPKMTPQSLLASQ 129
+ E ++ L W GGE++A+ L L E+ A+ + P +++
Sbjct: 204 SPEHFNVYSDNMGTLAKINWVGGESQALLLLGERLKVEQHAFERGYYLPNQALPNIVDKP 263
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIK--------KAPPPLSLHGQLLWREFFYCAAT 181
+S LRFGCLS R FY +++ L+K ++ + + GQL+WRE+FY +
Sbjct: 264 KSMSAHLRFGCLSVRRFYWNVHDLFKNVQLRACIRGVQMTSGAHITGQLIWREYFYTMSV 323
Query: 182 RNPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
NP +DRM GN IC+ IPW N + L +W QTGFP IDA M QL EGW+HH R+
Sbjct: 324 NNPQYDRMEGNEICLNIPWAKPNEDHLQRWRLGQTGFPLIDAAMRQLLAEGWLHHTLRNT 383
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF--FQQFFHCYCPVKF 298
VA FLTRG LW +WE G++ F + LLDADWSV AG WMW+S S+F CPV
Sbjct: 384 VATFLTRGGLWQNWEFGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDTSQVSCPVAL 443
Query: 299 GRKADPNGDFI 309
++ DPNG +I
Sbjct: 444 AKRFDPNGVYI 454
>gi|348680515|gb|EGZ20331.1| DNA photolyase cryptochrome [Phytophthora sojae]
Length = 708
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 179/373 (47%), Gaps = 69/373 (18%)
Query: 1 MSSSIEKKLT----LSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLV 56
++ +++ K+T ++L II NGG+ P Y + I M P+ L
Sbjct: 238 VAETLDVKVTSIRGVTLYDPHEIIRLNGGQPPTDYERLLEITDNMPQPAQPIPAPVKLSN 297
Query: 57 RQATTP----------LRDD----------HDEKYG-------VPTLEELGFDIEGLLPP 89
A TP R D EK G VP L LG L PP
Sbjct: 298 AAAFTPDQLFSWLKHFYRQDPSAANVIAGVEAEKEGATPEPFVVPPLTALG-----LTPP 352
Query: 90 T----WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSL-LASQTGLSPFLRFGCLSTR 144
+ + GGE+EAM+RL+ + + V F +PK +P + S T LS +L FGCLS R
Sbjct: 353 SPHAAFYGGESEAMKRLDAFCQEERRVGLFEKPKTSPVAFDPPSTTTLSAYLTFGCLSAR 412
Query: 145 LFYHDLN--KLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDV 202
F++ + +L ++ P ++L GQL+WREFFYC A P FD NP C QI W +
Sbjct: 413 EFFYRIMFIQLKFPLRPGPTQVTLEGQLMWREFFYCYACGTPGFDSQKQNPGCKQIDWRL 472
Query: 203 NMEA--------------------------LAKWANAQTGFPWIDAIMTQLREEGWIHHL 236
E L W +TGFPWIDA+M Q+ +EGW HH
Sbjct: 473 RAEVYDSHPEQHHQGAIVTKDADEKLALHQLQCWKEGRTGFPWIDAVMRQINQEGWAHHA 532
Query: 237 ARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV 296
RHAVACFLTRG L++SW +G F E L+D DW +N G W+W+S S FF + P
Sbjct: 533 GRHAVACFLTRGVLYISWLQGAAYFQEKLIDMDWPINIGNWLWVSASCFFSNYRRVASPT 592
Query: 297 KFGRKADPNGDFI 309
F ++ D +G+FI
Sbjct: 593 TFPQRWDQHGEFI 605
>gi|194900020|ref|XP_001979555.1| GG23184 [Drosophila erecta]
gi|190651258|gb|EDV48513.1| GG23184 [Drosophila erecta]
Length = 542
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 170/321 (52%), Gaps = 18/321 (5%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS--PAEAPVTPLLVRQATTPLR 64
+K++ +L + +IE NGG PLTY F V + P A+A + + R
Sbjct: 134 EKVSHTLWDPQLVIETNGGIPPLTYQMFLHTVQIIGLPPRPTADARLEDATFVELDPEFR 193
Query: 65 DDHD--EKYGVPTLEELGFDIEGLLPPT-WKGGETEAMRRLERHL--ERKAWVASFGRPK 119
+ EK P + D G L W+GGE +A+ L L E+ A+ F P
Sbjct: 194 RSINMFEKLPTPHHFNVYEDNMGFLAKIKWRGGEKQALLLLGERLKVEQHAFERGFYLPN 253
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK--------KAPPPLSLHGQLL 171
++ S +S LRFGCLS R FY ++ L+K ++ + + GQL+
Sbjct: 254 QALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQMTGGAHITGQLI 313
Query: 172 WREFFYCAATRNPNFDRMLGNPICVQIPWDVNME-ALAKWANAQTGFPWIDAIMTQLREE 230
WRE+FY + NPN+DRM GN IC+ IPW E L +W QTGFP ID M QL E
Sbjct: 314 WREYFYTMSVNNPNYDRMEGNEICLSIPWAKPKEDLLQRWRLGQTGFPLIDGAMRQLLAE 373
Query: 231 GWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFF 290
GW+HH R+ VA FLTRG LW SWE G++ F + LLDADWSV AG WMW+S S+F +
Sbjct: 374 GWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLD 433
Query: 291 HCY--CPVKFGRKADPNGDFI 309
CPV ++ DP+G +I
Sbjct: 434 SSLVTCPVALAKRLDPDGTYI 454
>gi|443894766|dbj|GAC72113.1| deoxyribodipyrimidine photolyase [Pseudozyma antarctica T-34]
Length = 685
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/267 (43%), Positives = 149/267 (55%), Gaps = 27/267 (10%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA- 127
E + VPTLE +G D T KGGE A+ +L + + +VA+F +PK +P
Sbjct: 246 ELFAVPTLESIGMDASKG-KDTIKGGEPLALEKLAKICKDAEYVATFAKPKTSPGQSAED 304
Query: 128 -SQTGLSPFLRFGCLSTRLFYHDL---NKLYKRIKKAPPPLSLHGQLLWREFFYCAA-TR 182
S T LSP+L+FGCLS R + D K YK K PP +L+GQLL+R+ + CA
Sbjct: 305 PSTTLLSPYLKFGCLSVRKLWWDAEEAKKKYKGGSKTGPPENLNGQLLFRDMYACAEHAI 364
Query: 183 NPNFDRMLGNPICVQIPW------DVNMEA--------------LAKWANAQTGFPWIDA 222
+F R+ GN +C + W D N E L+ + QTGFPWIDA
Sbjct: 365 GDDFQRVRGNEVCRYMDWYLPTHYDKNGEVILPRPPGDAVSEARLSAFKLGQTGFPWIDA 424
Query: 223 IMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSC 282
+M QLR EGW+HHL RH+VA FLTRG W+SWE G +IFDE L+D D N G WMWLSC
Sbjct: 425 LMRQLRLEGWMHHLGRHSVAAFLTRGQCWISWERGAEIFDEYLIDWDPCSNPGNWMWLSC 484
Query: 283 SSFFQQFFHCYCPVKFGRKADPNGDFI 309
S+FF Q+F Y F K D G +
Sbjct: 485 SAFFTQYFRLYGLATFPAKYDKTGALV 511
>gi|380479795|emb|CCF42805.1| DNA photolyase [Colletotrichum higginsianum]
Length = 461
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/267 (43%), Positives = 150/267 (56%), Gaps = 34/267 (12%)
Query: 71 YGVPTLEELGFDIEGLLPPT---WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL- 126
+ + T+EELGF PP +GGET A+ LE + + A+F +PK +P +
Sbjct: 69 FAIETMEELGF------PPASTPHRGGETRALAMLEAMAADEKYTATFEKPKTSPAAFEP 122
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPP--PLSLHGQLLWREFFYCA-ATRN 183
S T LSPFL FG LS R FY + + R K P SL GQLL+R+ ++ A A
Sbjct: 123 QSTTFLSPFLHFGALSVREFYWRVQGVVARYGKGASKVPESLTGQLLFRDMYFAAHAALG 182
Query: 184 PNFDRMLGNPICVQIPWDVNMEALA---------------------KWANAQTGFPWIDA 222
F + NP C IPW + + A +W TGFPWIDA
Sbjct: 183 HRFTQTANNPYCRFIPWHLPSKVDAETGLVTGEYHVDSEQADEWFRRWKYGMTGFPWIDA 242
Query: 223 IMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSC 282
+M QLREEGWIHHL RHAVACFLTRG +V WE G ++F+E LLD + + NAG W WLSC
Sbjct: 243 LMRQLREEGWIHHLGRHAVACFLTRGGCYVDWERGCEVFEEWLLDHEPACNAGNWQWLSC 302
Query: 283 SSFFQQFFHCYCPVKFGRKADPNGDFI 309
++FF Q+F CY PV FG+K D G F+
Sbjct: 303 TAFFSQYFRCYSPVAFGQKWDRQGAFV 329
>gi|195451205|ref|XP_002072813.1| GK13802 [Drosophila willistoni]
gi|194168898|gb|EDW83799.1| GK13802 [Drosophila willistoni]
Length = 543
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 166/309 (53%), Gaps = 18/309 (5%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMD-SPSPAEAPV-TPLLVRQATTPLRDDHDEKYGVPTL 76
+IE NGG PLTY F V + P P P + + + L+ + PT
Sbjct: 148 VIETNGGIPPLTYQMFLHTVEIIGLPPRPTNDPNWNNVGFVEISQELQRELKYLQHFPTP 207
Query: 77 EELGF--DIEGLLPP-TWKGGETEAMRRLERHL--ERKAWVASFGRPKMTPQSLLASQTG 131
E D G L W+GGETEA+ L+ L E+ A+ + P ++L +
Sbjct: 208 EYFNIYCDNMGYLAKINWRGGETEALLLLQERLKVEQSAFERGYYLPNQALPNILDTPKS 267
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIK--------KAPPPLSLHGQLLWREFFYCAATRN 183
+SP LRFGCLS R FY +++ L+K ++ + + GQL+WRE+FY + N
Sbjct: 268 MSPHLRFGCLSVRRFYWNVHDLFKNVQLQACVRGVQMTGGSHITGQLIWREYFYTMSVNN 327
Query: 184 PNFDRMLGNPICVQIPWDV-NMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
N+DRM GN IC+ IPW + E L +W QTGFP ID M QL EGW+HH R+ VA
Sbjct: 328 SNYDRMDGNEICLNIPWSKPHEEKLERWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVA 387
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCY--CPVKFGR 300
FLTRG LW SWE G++ F + LLDADWSV AG WMW+S S+F + C +
Sbjct: 388 TFLTRGGLWQSWEHGVQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSLVTCSQAMAK 447
Query: 301 KADPNGDFI 309
+ DP+G +I
Sbjct: 448 RLDPDGLYI 456
>gi|71009567|ref|XP_758291.1| hypothetical protein UM02144.1 [Ustilago maydis 521]
gi|46098033|gb|EAK83266.1| hypothetical protein UM02144.1 [Ustilago maydis 521]
Length = 684
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/371 (36%), Positives = 174/371 (46%), Gaps = 80/371 (21%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKM-DSPSPAEAP------------------VTPLLVRQ 58
+++ KN GK ++ Q IVA M D P P +AP P L R
Sbjct: 142 QVVNKNKGKPTMSMSTLQKIVADMGDVPKPIDAPEDLPLPTLKDSKSKSLQDTLPELARS 201
Query: 59 --------------------ATTPLRDDHDEK--------------YGVPTLEELGFDIE 84
+T L D+K + PTL LG D
Sbjct: 202 LEGLPYYTGKGREGPESIDLNSTELGGQRDKKVSCYDTVQGEASELFSAPTLASLGMDAS 261
Query: 85 GLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA--SQTGLSPFLRFGCLS 142
+ T KGGE A+ +L + +VA+F +PK +P S T LSP+L+FGCLS
Sbjct: 262 KV-KDTIKGGEPIALEKLANICKDAKYVATFAKPKTSPGQSAEDPSTTLLSPYLKFGCLS 320
Query: 143 TRLFYHDLNKLYKRIK---KAPPPLSLHGQLLWREFFYCAA-TRNPNFDRMLGNPICVQI 198
R + D + R K K PP +L+GQLL+R+ + CA F R+ GN +C +
Sbjct: 321 VRKLWWDAEEAKNRYKGGSKTGPPENLNGQLLFRDMYACAEYAIGDAFGRVRGNEVCRYM 380
Query: 199 PW------DVNMEA--------------LAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
W D N E L+ + QTGFPWIDA+M QLR EGW+HHL R
Sbjct: 381 DWYLPTHYDENGEVVLPRPAGDAVSEARLSAYKLGQTGFPWIDALMRQLRLEGWMHHLGR 440
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
H+VA FLTRG W+SWE G +IFDE L+D D N G WMWLSCS+FF Q+F Y F
Sbjct: 441 HSVAAFLTRGQCWISWERGAEIFDEYLIDWDPCSNPGNWMWLSCSAFFTQYFRLYGLATF 500
Query: 299 GRKADPNGDFI 309
K D G +
Sbjct: 501 PAKYDKTGALV 511
>gi|301097555|ref|XP_002897872.1| cryptochrome, putative [Phytophthora infestans T30-4]
gi|262106620|gb|EEY64672.1| cryptochrome, putative [Phytophthora infestans T30-4]
Length = 694
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/360 (34%), Positives = 166/360 (46%), Gaps = 66/360 (18%)
Query: 11 LSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPL--------------- 54
++L + II N G+ P Y + I KM P+ P APV L
Sbjct: 232 VTLYNPHEIIRLNSGQAPTDYERLLEITEKMPQPTQPIPAPVKLLNAACFSTDKLFSLLE 291
Query: 55 -----------LVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPT----WKGGETEAM 99
++ ++ E + P L G L PPT GGE+ AM
Sbjct: 292 DVCQQNPSEADVIAGVAGDVKKTESELFVAPPLTAFG-----LTPPTPHAPLIGGESAAM 346
Query: 100 RRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSPFLRFGCLSTRLFYHDLNKL---YK 155
+RL+ E + V F +PK +P S+ S T LS +L FGCLS R F++ + + Y
Sbjct: 347 KRLDDFCEDERRVGQFEKPKTSPVSIDGPSTTTLSAYLSFGCLSAREFFYRIMFIQLQYP 406
Query: 156 RIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW--------------- 200
P ++L GQL+WREFFYC NFD NP C QI W
Sbjct: 407 HRPGLPTQVTLEGQLMWREFFYCYMCGTRNFDSQELNPSCKQIDWRLLNEYYVSHPEYDE 466
Query: 201 -----------DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
+ M L W + +TGFPWIDA+M Q+ +EGW HH RHAVACFLTRG
Sbjct: 467 QEPKKVTEADEKLAMRQLQCWKDGRTGFPWIDAVMRQINQEGWTHHAGRHAVACFLTRGV 526
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L++SW G F E ++D DW +N G W+W+S S FF + P F ++ D G FI
Sbjct: 527 LYISWLRGATYFQEKMIDLDWPINVGNWLWVSASCFFTNYRRMASPSTFPQRWDQQGQFI 586
>gi|340376121|ref|XP_003386582.1| PREDICTED: cryptochrome-2-like [Amphimedon queenslandica]
Length = 544
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 159/296 (53%), Gaps = 12/296 (4%)
Query: 19 IIEKNGGKTPLTYHQFQSI---VAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPT 75
I+ N G+ P +Y + + + V + P P PV +L+RQ + +D + + +P+
Sbjct: 186 ILRANNGRFPHSYKELRRLLPLVGRPREPFPEPDPVL-VLLRQNSPEDQDLEEPENRIPS 244
Query: 76 LEELGFDIE-GLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
L++LGF +E L +W GGETE + RL R++ + P + L S+ L P
Sbjct: 245 LQDLGFGLEETLYTNSWVGGETEGLSRLSNFCSRRSTQPN------EPITWLISKDSLGP 298
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGNP 193
++RFGCLS R + L + K + L LL REF Y P FD M NP
Sbjct: 299 YIRFGCLSVRQLFSQLRQYASTSSKGQVLFAELTKNLLMREFAYMVGLTVPKFDTMKDNP 358
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+C+Q+PW+ N W +TG+PWIDA M Q+ +GW H+ R ++A FLTRG LW+S
Sbjct: 359 LCIQLPWEENERFFYAWKEGRTGYPWIDAAMRQIVRDGWSHYSTRQSIAVFLTRGYLWIS 418
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
WE+G++ F E +LD + V+ WM SCS FF F Y P G++ D +G FI
Sbjct: 419 WEKGLEFFQEHMLDFELPVSTVCWMQSSCSGFFVDFIESYDPCYIGKQMDSDGHFI 474
>gi|47212596|emb|CAF93038.1| unnamed protein product [Tetraodon nigroviridis]
Length = 662
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/135 (68%), Positives = 102/135 (75%), Gaps = 21/135 (15%)
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHH AR A ACFLTRGDLW+SWE
Sbjct: 451 LQIPWDQNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHQARRASACFLTRGDLWISWE 510
Query: 256 EGMK---------------------IFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYC 294
GMK +F+ELLLDADWSVNAG WMWLSCS+FFQQFF CYC
Sbjct: 511 CGMKVGGPPWSRRRRRRLSARLLPQVFEELLLDADWSVNAGSWMWLSCSAFFQQFFKCYC 570
Query: 295 PVKFGRKADPNGDFI 309
PV FGR+ DP+GD+I
Sbjct: 571 PVGFGRRTDPSGDYI 585
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RI+E N PLT+ +FQ+IV++++ P VT + + TP+ D+HD+ Y +P+LE
Sbjct: 173 RIVEMNNNSPPLTFKRFQTIVSRLELPRRPLPSVTQQQMDKCGTPVADNHDQLYSIPSLE 232
Query: 78 ELG 80
EL
Sbjct: 233 ELA 235
>gi|361124167|gb|EHK96280.1| putative Cryptochrome-2 [Glarea lozoyensis 74030]
Length = 586
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 177/348 (50%), Gaps = 60/348 (17%)
Query: 16 SRRIIEKNGGKTPLTYHQFQSIVAKMDS-PSPAEAPVT-------PLLVRQATTPLRDD- 66
S +++KNGG +T Q Q+ K+ P P AP + L Q + D
Sbjct: 88 SDELVKKNGGNATMTITQVQTAGPKVGPVPRPIPAPKSIPDPGELELHFEQEQPTSKPDF 147
Query: 67 ------HDEK-----------YGVPTLEELGFDIEGLLPPTWK--GGETEAMRRLERHLE 107
HD+K + VP+LEELG + P T K GGE+ A++ L + +
Sbjct: 148 NSGPRRHDDKSYENISGPNGDFAVPSLEELG-----MQPATTKHRGGESLALKALSKIIA 202
Query: 108 RKAWVASFGRPKMTPQSLLASQTGL-SPFLRFGCLSTRLFY---HDLNKLYKRIKKAPPP 163
K + A+F +PK P T L SP L FG LS R FY D YK K + PP
Sbjct: 203 DKKYTATFEKPKTAPTDFEPQATTLLSPHLHFGSLSIREFYWQVQDTIASYKG-KSSEPP 261
Query: 164 LSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPW--------DVNM---------- 204
+SL GQL +R+ ++ A A + + + NP C IP+ D +
Sbjct: 262 VSLLGQLYFRDMYFGAQAAGGWYYAQTINNPHCRFIPFSLPAKIDPDTKLITGEFQSTDS 321
Query: 205 ---EALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
E +W TGFPWIDA+M QLR EGWIHHL RHAVACFLTRG ++ WE G ++F
Sbjct: 322 QAEEWFVRWKYGLTGFPWIDALMRQLRLEGWIHHLGRHAVACFLTRGGCFIHWERGAEVF 381
Query: 262 DELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+E L+D + + N G W WLSC++F+ ++ Y P+ FG+K DP G F+
Sbjct: 382 EEWLIDHEVASNVGNWQWLSCTAFYSMYYRMYSPIAFGQKWDPEGKFV 429
>gi|293321543|emb|CAZ66367.1| cryptochrome [Suberites domuncula]
Length = 517
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 158/294 (53%), Gaps = 8/294 (2%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+I N G+ PL+Y +F+ ++ M P+ P+ + P + + +P L+
Sbjct: 161 NVIALNNGRVPLSYKEFRRLMPLMGKPASPIPEPHPMSLCMKAPPSELVPEPEGKIPKLQ 220
Query: 78 ELGFDIE-GLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
+LG E L +W GGETEA+ RL R+A + + P L S+ LSP++
Sbjct: 221 DLGLSDEFALYTNSWVGGETEALSRLSSFCSRRAAIPN------EPVHWLMSKDTLSPYI 274
Query: 137 RFGCLSTRLFYHDLNKLYKRIKKAPPPLSL-HGQLLWREFFYCAATRNPNFDRMLGNPIC 195
+FGCLS R + L + K L LL REF + + +P FD M GN +C
Sbjct: 275 KFGCLSVRQLFSQLLQFASTSSKGQELFELLTKNLLLREFAFLVGSSSPKFDVMEGNSLC 334
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
+Q+PW+ N + + N QTG+PWIDAI+ Q+R++GW H LAR ++A FLTRG LW+SW
Sbjct: 335 IQLPWESNNVFIQAFRNGQTGYPWIDAIIRQIRQDGWAHFLARQSIAVFLTRGYLWISWV 394
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G + F E ++D + V++ WM SCS FF Y P G++ D +G +I
Sbjct: 395 LGKEFFQEFMIDFELPVSSVCWMQSSCSGFFCTQIESYDPCLVGKQIDTDGHYI 448
>gi|52699557|gb|AAU86901.1| cryptochrome 2 [Sylvia borin]
Length = 244
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 94/100 (94%)
Query: 210 WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDAD 269
WA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SWE G+++FDELLLDAD
Sbjct: 1 WAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDAD 60
Query: 270 WSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+SVNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD++
Sbjct: 61 FSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 100
>gi|170047814|ref|XP_001851403.1| DNA photolyase [Culex quinquefasciatus]
gi|205694137|sp|B0WRR9.1|CRY1_CULQU RecName: Full=Cryptochrome-1
gi|167870095|gb|EDS33478.1| DNA photolyase [Culex quinquefasciatus]
Length = 499
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 146/250 (58%), Gaps = 13/250 (5%)
Query: 73 VPTLEELGFDIEG---LLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPKMTPQSLLA 127
P E+ G EG + W GGE +A+ L R L E +A+ + P LA
Sbjct: 155 APVPEDFGIYYEGNADIARQRWTGGEAKALELLGRRLKQEEEAFREGYYLPTQARPDFLA 214
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK-----KAPPPLSLHGQLLWREFFYCAATR 182
+ +S LRFGCLS R+FY ++ L+ R++ K P + GQL+WRE+FY +
Sbjct: 215 PPSSMSAALRFGCLSVRMFYWCVHDLFARVQANNQLKHPGGHHITGQLIWREYFYTMSVH 274
Query: 183 NPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
NP++ M NPIC+ IPW + ++L +W +TGFP IDA M QL EGW+HH+ R+
Sbjct: 275 NPHYAVMELNPICLNIPWYEAKDDSLDRWKEGRTGFPLIDAAMRQLMAEGWLHHILRNIT 334
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQF--FHCYCPVKFG 299
A FLTRG LW+SWE G++ F + LLDADWSV AG WMW+S S+F + C PV
Sbjct: 335 ATFLTRGGLWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSSAFEKLLDSSSCTSPVALA 394
Query: 300 RKADPNGDFI 309
R+ DP G+++
Sbjct: 395 RRLDPKGEYV 404
>gi|313228844|emb|CBY17995.1| unnamed protein product [Oikopleura dioica]
Length = 525
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 171/320 (53%), Gaps = 28/320 (8%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKY 71
+L + II+ N G+ PL+ +F S++ +D P+ VT + + + + ++H Y
Sbjct: 137 TLYDPQEIIDANEGQVPLSLDEFYSVIPSLDVPALPAPTVTAEMFKSCSVRIEENHQAIY 196
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM----------- 120
GVPT+ LG + W GGET A+ RL+ +++ P
Sbjct: 197 GVPTMASLGLECPRA-HTRWPGGETVALERLKYKMKQNTLYEFNQGPSTSKAANHEYEIP 255
Query: 121 -TPQSLLASQ---TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFF 176
T + +Q TGLSP++ G +S R F+H ++++ ++ GQ+++REFF
Sbjct: 256 GTSEPWFETQPETTGLSPYINLGSISPRTFWHGAKNCSEKMRT-----TVQGQMIYREFF 310
Query: 177 YCAATRNPNFDRMLGNPICVQIPW------DVNMEALAKWANAQTGFPWIDAIMTQLREE 230
Y A NF R+ GN IC I W + E + K+ TG+PWIDA + Q++ E
Sbjct: 311 YTVAYTVNNFTRIEGNRICKDIKWSDPKTNERAAEWIEKFKQGMTGYPWIDAAVRQMKTE 370
Query: 231 GWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQF- 289
GWI H++R ++A FLT G +W SWE G ++F+E LLDAD+++NAG ++W++ S+F Q
Sbjct: 371 GWITHISRFSLASFLTVGQMWCSWEVGQQLFEEFLLDADYALNAGNFLWVTGSAFANQIP 430
Query: 290 FHCYCPVKFGRKADPNGDFI 309
PVK RK D +G FI
Sbjct: 431 VKALDPVKLARKWDTHGSFI 450
>gi|358368155|dbj|GAA84772.1| DNA photolyase [Aspergillus kawachii IFO 4308]
Length = 664
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 186/383 (48%), Gaps = 86/383 (22%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDS---PSPAEAPVT---------------- 52
+L S +++ N G+ ++ HQ + V ++++ P +AP +
Sbjct: 139 TLFDSDEVVKHNKGEPTMSIHQVEKAVEQINNGVPDRPVDAPKSVPDPLGEEEMRAICGV 198
Query: 53 ----PLLVRQATTPLRDDHDEK-----------YGVPTLEELGFDIEGLLPPTWKGGETE 97
P R +H++ + +P LEEL D P GGE+
Sbjct: 199 EHEVPDQEDDLNAAHRTEHNDNQYKNIAGTNGDFSIPKLEELSIDPSQATTPH-HGGESI 257
Query: 98 AMRRLERHLER-KAWVASFGRPKMTPQSL-LASQTGLSPFLRFGCLSTRLFYHDL-NKLY 154
A+ L +L++ + +VA+F +PK +P + L + T LSP L FG LS R F+HD+ + L+
Sbjct: 258 ALEMLRTYLQQNEDFVATFEKPKTSPAAFHLQATTLLSPHLHFGSLSVRKFWHDVQDTLH 317
Query: 155 KRIKKAPP----PLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPW--------- 200
+R P P +L GQLL+RE F+ A A P + + GN I IPW
Sbjct: 318 ERESAHKPTSNLPTNLPGQLLFREMFFAAQAALGPVYAQARGNKIARFIPWHLQSNYDEE 377
Query: 201 -----------DVNMEA-LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
D E +W +TGFPWIDA+M QL+ EGWIHHL RH+VACFLTRG
Sbjct: 378 TGLVDRTYTIDDEQAEVWFRRWKEGRTGFPWIDALMRQLKYEGWIHHLGRHSVACFLTRG 437
Query: 249 DLWVSWEEGMKIFDELLLD----------------------ADWSVNAGMWMWLSCSSFF 286
+V WE G ++F+E L+D + + N G W WLSC++FF
Sbjct: 438 GCYVHWERGAEVFEEWLVDRISPILFSRSDFDSYDTNNRVIDETASNVGNWSWLSCTAFF 497
Query: 287 QQFFHCYCPVKFGRKADPNGDFI 309
QF+ CY PV FG+K DP G F+
Sbjct: 498 TQFYRCYSPVAFGKKWDPEGLFV 520
>gi|13543860|gb|AAH06077.1| Cry2 protein, partial [Mus musculus]
Length = 243
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 92/98 (93%)
Query: 212 NAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWS 271
+TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE G+++FDELLLDAD+S
Sbjct: 1 EGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFS 60
Query: 272 VNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
VNAG WMWLSCS+FFQQFFHCYCPV FGR+ DP+GD+I
Sbjct: 61 VNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 98
>gi|378728105|gb|EHY54564.1| cryptochrome [Exophiala dermatitidis NIH/UT8656]
Length = 987
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 144/261 (55%), Gaps = 43/261 (16%)
Query: 92 KGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSPFLRFGCLSTRLFYHDL 150
KGGET + L H+ + ++A+F +P P + + T LSP + FG +S R F+ +
Sbjct: 370 KGGETTGLALLAHHISDETYIATFEKPLTAPTAFDPPATTMLSPHMHFGSVSVRRFWWAV 429
Query: 151 NKLYKRIKK-----------APPPLSLHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQI 198
+ ++ ++ +P P++L GQLL+R+ ++ A A F + +GNP+ +
Sbjct: 430 QDVLEQRRRRSLENKISLPISPHPVNLPGQLLFRDMYFAAYAAVGATFGQAVGNPVARFV 489
Query: 199 PWDVNMEA------------------------------LAKWANAQTGFPWIDAIMTQLR 228
PWD+ EA +W TGFPWIDA+M QLR
Sbjct: 490 PWDLQSEASGSSLATSDQLSGRDPTATYMVSNPQAEEYFRRWKYGCTGFPWIDALMRQLR 549
Query: 229 EEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ 288
+EGWIHHL RHAVA FLTRG +VSWE G ++F+E LLD + + NAG WMWLSC +FF Q
Sbjct: 550 QEGWIHHLGRHAVASFLTRGGCYVSWERGAEVFEEWLLDHEVACNAGNWMWLSCVAFFSQ 609
Query: 289 FFHCYCPVKFGRKADPNGDFI 309
F Y PV F +K DP G+F+
Sbjct: 610 FHRVYSPVSFPKKWDPEGNFV 630
>gi|34147967|gb|AAQ62559.1| cryptochrome 1 [Ovis aries]
Length = 161
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/153 (64%), Positives = 118/153 (77%), Gaps = 7/153 (4%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLRDDHDEKYGVP 74
+IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL DDHDEKYGVP
Sbjct: 12 KIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVMEKCTTPLSDDHDEKYGVP 68
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP
Sbjct: 69 SLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSP 128
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSL 166
+LRFGCLS RLFY L LYK++KK + PPLSL
Sbjct: 129 YLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSL 161
>gi|345570555|gb|EGX53376.1| hypothetical protein AOL_s00006g242 [Arthrobotrys oligospora ATCC
24927]
Length = 637
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 150/273 (54%), Gaps = 38/273 (13%)
Query: 71 YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL-ASQ 129
+ VPT+EEL + P +GGE A+ LE ++ K + A+F +P+ P + AS
Sbjct: 223 FSVPTMEEL--KMTATTPH--RGGEKIALEVLENVIKDKEYTATFSKPETAPTAFQPAST 278
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA-----PPPLSLHGQLLWREFFYCA-ATRN 183
LSP + FG +S R FY D+ ++ + +K+ PP SL GQL +R+ ++ A A
Sbjct: 279 CLLSPHMHFGSISCRKFYWDVLEVVEEWEKSGKKATEPPCSLTGQLFFRDMYFAAQAGIG 338
Query: 184 PNFDRMLGNPICVQIPWDV---------------------------NMEALAKWANAQTG 216
F + L N IPW++ E +W +TG
Sbjct: 339 TCFGQTLHNSKVRYIPWNLPSKHQPNPDDPKKSLSIKGTYHVDSEEAEEWFIRWREGRTG 398
Query: 217 FPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGM 276
FPWIDAIM QL+ EGWIHHLARHAVACFLTRG ++ WE G ++F+E LLD + S NAG
Sbjct: 399 FPWIDAIMIQLKTEGWIHHLARHAVACFLTRGGCYIDWERGAEVFEEWLLDHEISCNAGN 458
Query: 277 WMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W WLSC++FF Q+ Y P+ F +K D G+++
Sbjct: 459 WQWLSCTAFFSQYMRIYSPIAFPQKTDKEGNYV 491
>gi|375267550|emb|CCD28225.1| DNA photolyase, cryptochrome, partial [Plasmopara viticola]
Length = 259
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 134/207 (64%), Gaps = 19/207 (9%)
Query: 93 GGETEAMRRLERHLERKAWVASFGRPKMTPQSL--LASQTGLSPFLRFGCLSTRLFYHDL 150
GGE +A+ L+ + + + VA F +PK +P S T LSP++ +GCLS R FYH +
Sbjct: 53 GGEQKALETLDNYCKDEDRVARFEKPKTSPAQPPPNPSTTVLSPYMFYGCLSPRTFYHRV 112
Query: 151 NKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLG--NPICVQ--IPWDVN-- 203
+ KR KK + PP+SL GQLLWR+F++C NP F G N + Q +P D
Sbjct: 113 QDIQKRRKKGSQPPVSLIGQLLWRDFYHCHGHDNPYFXXXGGESNLLTSQLAVPXDSRER 172
Query: 204 -----MEALAK-----WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+ LA+ W + +TGFPWIDAIM QL+EEGW+HHLARHAVACFLTRGDL++S
Sbjct: 173 KGHERRDKLARSQFEAWRDGRTGFPWIDAIMIQLKEEGWMHHLARHAVACFLTRGDLYIS 232
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWL 280
W G+++F E L+D DWSVNAG W+WL
Sbjct: 233 WVRGLEVFQERLIDHDWSVNAGNWLWL 259
>gi|313212920|emb|CBY36823.1| unnamed protein product [Oikopleura dioica]
Length = 476
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 163/313 (52%), Gaps = 19/313 (6%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
M + L +L +I KNGGK P+ +F + +A M+ P VT + +
Sbjct: 123 MEIKTKSFLGHTLYDQDEVIAKNGGKIPMDLSEFYAAIADMEQPGAPCPTVTAKHFKLGS 182
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPP----TWKGGETEAMRRLERHLERKAWVASFG 116
+ + L F + G P ++GGE +A++ L+ + G
Sbjct: 183 KKII--------IFKKSILAFGVWGHQAPRSLPIYRGGERQALKVLQAKINDPTLFTLNG 234
Query: 117 RPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFF 176
+ ++ L T LS + +GC+STR F+ KL + L GQ+++REFF
Sbjct: 235 FNQGV-KTKLPHTTYLSAYQNYGCISTRHFWKAAEKL-----PESKTIMLRGQIMYREFF 288
Query: 177 YCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHL 236
Y AA++ NF +M GN IC QI W N E L+ W +TG+P+IDA+M QL EG+IHHL
Sbjct: 289 YVAASQVNNFTKMAGNRICRQIEWYKNEEHLSAWQEGRTGYPYIDAVMRQLVTEGFIHHL 348
Query: 237 ARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFH-CYCP 295
R AVA FLT G LW++WE G ++F+E +D D+++NAG WMW + S+F P
Sbjct: 349 NRWAVASFLTNGQLWLNWEHGQEMFEEHQIDGDYAMNAGCWMWCTGSAFMDSISEKTLDP 408
Query: 296 VKFGRKADPNGDF 308
VKF R+ DP G F
Sbjct: 409 VKFARRWDPEGHF 421
>gi|323650256|gb|ADX97214.1| cryptochrome 1a isoform 1 [Perca flavescens]
Length = 278
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 80/90 (88%), Positives = 86/90 (95%)
Query: 220 IDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW 279
IDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+ WEEGMK+F+ELLLDADWSVNAG WMW
Sbjct: 1 IDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIGWEEGMKVFEELLLDADWSVNAGSWMW 60
Query: 280 LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LSCSSFFQQFFHCYCPV FGR+ DPNGD+I
Sbjct: 61 LSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 90
>gi|323455593|gb|EGB11461.1| hypothetical protein AURANDRAFT_20741 [Aureococcus anophagefferens]
Length = 529
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 140/246 (56%), Gaps = 11/246 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKA--WVASFGRPKM--TPQSLLAS 128
VPTLE +G++ GGE+ + RLE L R W +F +PK T + S
Sbjct: 195 VPTLEAMGYEAPPAAAFGVAGGESAGLARLEAALARDGGKWARAFEKPKTKSTKFDVDPS 254
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDR 188
T LSP+L+FGC+S RLF L +Y A PP SL GQL +RE Y A ++
Sbjct: 255 TTVLSPYLKFGCVSARLFRARLADVYAGGSHAQPPTSLLGQLYFREMAYANALKHGAAFA 314
Query: 189 MLGNPICVQIPWD------VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
+P+C IPWD L W +TG+P++DA M QLRE GWIHHLARHAVA
Sbjct: 315 ASPSPVCADIPWDDPATDAAAAARLRAWEAGETGYPFVDAAMRQLRETGWIHHLARHAVA 374
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRK 301
CFLTRGDLW+ W EG ++FD LLDADW+VN W+ L+ +S+ FF Y PV ++
Sbjct: 375 CFLTRGDLWLPWTEGARVFDRDLLDADWAVNNFNWLGLAGVASWSPPFFRVYSPVPNHKQ 434
Query: 302 ADPNGD 307
+ N D
Sbjct: 435 SSLNVD 440
>gi|80971696|gb|ABB52818.1| cryptochrome 2 [Sesamia nonagrioides]
Length = 264
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 152/271 (56%), Gaps = 26/271 (9%)
Query: 29 LTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGV----PTLEELG--FD 82
LTY F VA + P + V+ + P D +++ V P E+LG +
Sbjct: 1 LTYQMFLHTVATIGDPPRPVGDIDFTGVKFGSLP--DSFYQEFTVFDKIPKPEDLGVFLE 58
Query: 83 IEGLLPPTWKGGETEAMRRLERHLE-------RKAWVASFGRPKMTPQSLLASQTGLSPF 135
E + W GGET A++++++ L R +++ + G P LL LSP
Sbjct: 59 NEDVRMIRWVGGETTALKQMQQRLAVKYETFLRGSYLPTHGNP-----DLLGRPISLSPA 113
Query: 136 LRFGCLSTRLFYHDLNKLYK-----RIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRML 190
LRFGCLS R F + L++ R+ + GQL+WRE+FY + NPN+ +M
Sbjct: 114 LRFGCLSVRSFCWSVQDLFREVHQGRLATQSASHFITGQLIWREYFYTMSVNNPNYGQMS 173
Query: 191 GNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
GNPIC+ IPW + + L +W +TGFP++DA M QLR EGW+HH+AR+ VA FLTRG
Sbjct: 174 GNPICLDIPWKNPEGDELQRWVEGRTGFPFVDAAMRQLRTEGWLHHVARNTVAFFLTRGT 233
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWL 280
LW+SWE G+ F + LLDADWSV AG WMW+
Sbjct: 234 LWLSWEHGLNHFLKYLLDADWSVCAGNWMWV 264
>gi|31321921|gb|AAM50087.1| cryptochrome 4 [Gallus gallus]
Length = 140
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 92/110 (83%)
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W + E L KW AQTGFPWIDAIMTQLR+EGWIHHLARHA ACFLTRGDLW+SWEEGMK
Sbjct: 2 WYEDAERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTRGDLWISWEEGMK 61
Query: 260 IFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+F+ELLLDAD+S+NAG WMWLS S+FF + +CPV+FGR+ DP G +I
Sbjct: 62 VFEELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTDPEGQYI 111
>gi|390988287|gb|AFM36775.1| cryptochrome, partial [Amphiprion clarkii]
Length = 97
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/97 (84%), Positives = 88/97 (90%)
Query: 176 FYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHH 235
FY AAT NP FD+M NPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHH
Sbjct: 1 FYTAATNNPCFDKMESNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHH 60
Query: 236 LARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSV 272
LARHAVACFLTRGDLW+SWEEGMK+F+ELLLDADWSV
Sbjct: 61 LARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSV 97
>gi|298162610|gb|ADI59672.1| cryptochrome [Haliotis discus hannai]
Length = 96
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/96 (84%), Positives = 87/96 (90%)
Query: 177 YCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHL 236
Y AAT NP FD+M NPICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHL
Sbjct: 1 YTAATNNPCFDKMESNPICVQIPWDRNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHL 60
Query: 237 ARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSV 272
ARHAVACFLTRGDLW+SWEEGMK+F+ELLLDADWSV
Sbjct: 61 ARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSV 96
>gi|379136508|gb|AFC93483.1| cryptochrome 1, partial [Gadus morhua]
Length = 109
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 79/108 (73%), Positives = 89/108 (82%)
Query: 158 KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGF 217
K + PP+SLHGQLLWREFFY A+ PNFDRML NP+C QI WD E L+ W A+TGF
Sbjct: 2 KHSAPPVSLHGQLLWREFFYTASVGVPNFDRMLDNPVCTQIDWDTXPEYLSAWKEARTGF 61
Query: 218 PWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
P+IDAIMTQLR EGWIHHLARHAVACFLTRGDLW+SWEEG K+F+ LL
Sbjct: 62 PFIDAIMTQLRREGWIHHLARHAVACFLTRGDLWISWEEGKKVFEGLL 109
>gi|313234987|emb|CBY24933.1| unnamed protein product [Oikopleura dioica]
Length = 374
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 142/258 (55%), Gaps = 15/258 (5%)
Query: 9 LTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD 68
L +L +I KNGGK P+ +F + +A M+ P A P + + P D+H+
Sbjct: 131 LGHTLYDQDEVIAKNGGKIPMDLSEFYAAIADMEQPG-APCPTSCI------APAVDNHE 183
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
YG+P + G LP ++GGE +A++ L+ + G + ++ L
Sbjct: 184 STYGIPKISVWGHQAPRSLP-IYRGGERQALKALQAKINDPTLFTLNGFNQGV-KTKLPH 241
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDR 188
T LS + +GC+STR F+ KL + L GQ+++REFFY AA++ NF +
Sbjct: 242 TTYLSAYQNYGCISTRHFWKAAEKL-----PESKTIMLRGQIMYREFFYVAASQVNNFTK 296
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
M GN IC QI W N E L+ W +TG+P+IDA+M QL EG+IHHL R AVA FLT G
Sbjct: 297 MAGNRICRQIEWYKNEEHLSAWQEGRTGYPYIDAVMRQLVTEGFIHHLNRWAVASFLTNG 356
Query: 249 DLWVSWEEGMK-IFDELL 265
LW++WE G + +F +L+
Sbjct: 357 QLWLNWEHGQESMFYDLI 374
>gi|374279322|gb|AEZ03843.1| cryptochrome 3, partial [Gadus morhua]
Length = 99
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/71 (84%), Positives = 67/71 (94%)
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
HAVACFLTRGDLW+SWE GMK+F+ELLLDADWSVNAG WMWLSCS+FFQQFFHCYCPV F
Sbjct: 1 HAVACFLTRGDLWISWESGMKVFEELLLDADWSVNAGSWMWLSCSAFFQQFFHCYCPVGF 60
Query: 299 GRKADPNGDFI 309
GR+ DP+GD+I
Sbjct: 61 GRRTDPSGDYI 71
>gi|320166331|gb|EFW43230.1| photolyase [Capsaspora owczarzaki ATCC 30864]
Length = 559
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 106/187 (56%), Gaps = 9/187 (4%)
Query: 28 PLTYHQFQSIVAKMDSP-SPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGL 86
PLTY +F S++ + P +P +AP L + P G+P+L ELG E
Sbjct: 135 PLTYGKFLSLIESIGPPVAPLDAPHR--LAERG--PAGQTDAATGGIPSLAELGIS-EPH 189
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQTGLSPFLRFGCLSTRL 145
P + GGET R+ +L A VA+F +P++ P S + +SP+LRFGC+S R
Sbjct: 190 TPLMFHGGETAGQARMHHYLGDLARVANFSKPELDPTLFEEPSSSVMSPYLRFGCVSPRR 249
Query: 146 FYHDLNKLYKRIKKAP--PPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
F+ ++NK+Y P PP+SL GQL WREFFY A PNFDR GNPIC QI WDVN
Sbjct: 250 FFFEINKVYIDSGVTPTQPPVSLLGQLYWREFFYLVAAGTPNFDRAAGNPICKQIQWDVN 309
Query: 204 MEALAKW 210
E LA W
Sbjct: 310 PEYLAAW 316
>gi|260586482|gb|ACX46123.1| cryptochrome 4 [Sylvia borin]
Length = 78
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 69/78 (88%)
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
I W + E L KW AQTGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRG LW+SWEEG
Sbjct: 1 ICWYKDAERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGHLWISWEEG 60
Query: 258 MKIFDELLLDADWSVNAG 275
MK+F+ELL+DAD+S+NAG
Sbjct: 61 MKVFEELLIDADYSINAG 78
>gi|335346423|gb|AEH41599.1| cry1-like protein [Favia fragum]
Length = 120
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 66/74 (89%)
Query: 236 LARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCP 295
LARHAV CFLTRGDLW+SWEEGM++FD LLDA+WS+NAG WMWLS S+FFQQFF+C CP
Sbjct: 1 LARHAVGCFLTRGDLWISWEEGMRVFDRWLLDAEWSLNAGNWMWLSYSAFFQQFFNCLCP 60
Query: 296 VKFGRKADPNGDFI 309
V FGRK DPNGD++
Sbjct: 61 VGFGRKLDPNGDYV 74
>gi|298162586|gb|ADI59660.1| cryptochrome [Paralichthys olivaceus]
Length = 96
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 72/96 (75%)
Query: 177 YCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHL 236
Y AT NP F M PICV IPWD N +ALAKWA + FPWI AIMTQL +G I HL
Sbjct: 1 YTDATNNPCFYNMDSTPICVMIPWDRNPKALAKWAEGRRSFPWIHAIMTQLTLDGRIDHL 60
Query: 237 ARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSV 272
ARHAVACFLTRG L ++W+EG+K+F+ELLLDADW V
Sbjct: 61 ARHAVACFLTRGHLRITWKEGLKVFEELLLDADWRV 96
>gi|18857915|dbj|BAB85473.1| CRYPTOCHROME [Sarcophaga crassipalpis]
Length = 216
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 188 RMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
RM N IC+ IPW N E L +W +TGFP IDA M QL EGW+HH R+ VA FLT
Sbjct: 1 RMEDNEICLNIPWAQTNHEQLQRWYQGKTGFPLIDAAMRQLLAEGWLHHTLRNTVATFLT 60
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCY--CPVKFGRKADP 304
RG LW +WE G++ F + LLDADWSV AG WMW+S S+F + CP+ ++ DP
Sbjct: 61 RGGLWQNWEHGLRYFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPIALAKRLDP 120
Query: 305 NGDFI 309
G +I
Sbjct: 121 MGQYI 125
>gi|31322268|gb|AAP22940.1| cryptochrome 1 [Arvicanthis ansorgei]
Length = 155
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 59/62 (95%)
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
GDLW+SWEEGMK+F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNGD
Sbjct: 1 GDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGD 60
Query: 308 FI 309
+I
Sbjct: 61 YI 62
>gi|313217172|emb|CBY38333.1| unnamed protein product [Oikopleura dioica]
Length = 571
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 133/274 (48%), Gaps = 34/274 (12%)
Query: 13 LPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRDDHDEKY 71
L S R II+ +GG PLT+ F + +++ P P P + +++ + +DHDE
Sbjct: 201 LYSPRDIIKASGGMPPLTFPSFVGVASQLPEPEKPINVPESDIVM----CSVSEDHDE-- 254
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
P E LG + L W GGETEA R L + W+ R + L A
Sbjct: 255 -APQNEILG---KKDLDFPWAGGETEARARFMSAL--RHWL--INRETQSTPDLRA---- 302
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
++P++ GCLS R YHD+N++Y+ I+ L LH L R+F Y A PN D
Sbjct: 303 VTPYIVQGCLSVRQVYHDVNRVYEEIQGEKATLKLHFAALHRDFLYNLAVV-PNDD---- 357
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
+ + + +D + + W TGFPW+DA+M Q R EGW+ R AV FLTRG LW
Sbjct: 358 --LNLDVSFDCDEARIRTWLEGNTGFPWVDAVMRQFRTEGWVAPTLRQAVLWFLTRGVLW 415
Query: 252 VSWEEGMKIFDEL-LLD-------ADWSVNAGMW 277
+ E ++ E LLD A W+ G W
Sbjct: 416 QTPEIAVQFMSEFCLLDLPLAKGYAAWASGTGAW 449
>gi|406507545|gb|AFS34616.1| cryptochrome 1, partial [Clunio marinus]
Length = 378
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 123/260 (47%), Gaps = 22/260 (8%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMD-SPSPAEAPVTPLLVRQA 59
+ + +K++ +L + II NGG PLTY V + P P V V
Sbjct: 123 LGIEVVEKVSHTLWNPEDIIRINGGFAPLTYQMLLHTVNVLGLPPRPVNNEVDFSQVNFG 182
Query: 60 TTPLRDDHDEKY--GVPTLEEL-------GFDIEGLLPPTWKGGETEAMRRLERHL--ER 108
T P + + +P+ E+ G D+ W GGE A+ ++ + E
Sbjct: 183 TIPEHHKINLRLMKSIPSPEDFLIFPENTGSDVY----VNWNGGERHALEQMIDRVKHEE 238
Query: 109 KAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK-----KAPPP 163
+A+ + P L+ S +S LRFGCLS R FY+ ++ + ++ K P
Sbjct: 239 EAFASGTYLPNQANVDLMGSPKSMSAALRFGCLSVRRFYYTIHDKFNEVQDKMVYKLPGG 298
Query: 164 LSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNME-ALAKWANAQTGFPWIDA 222
+ GQL+WRE+FY + NP + ++ NPIC+ IPW + E + KW +TG P IDA
Sbjct: 299 HHITGQLMWREYFYTMSINNPYYGQIKNNPICLNIPWKSSEEDEILKWKQGRTGVPIIDA 358
Query: 223 IMTQLREEGWIHHLARHAVA 242
M QL EGW+HH R+ A
Sbjct: 359 SMRQLLAEGWLHHTLRNLTA 378
>gi|219847792|ref|YP_002462225.1| deoxyribodipyrimidine photo-lyase [Chloroflexus aggregans DSM 9485]
gi|219542051|gb|ACL23789.1| Deoxyribodipyrimidine photo-lyase [Chloroflexus aggregans DSM 9485]
Length = 479
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 116/224 (51%), Gaps = 14/224 (6%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSL--LASQTGLSPFLRFGCLSTRLF 146
P + GET A LE + +A++ T + L +A + LSP+LRFG LS R
Sbjct: 197 PRFATGETAARAALEHFIHNA--IANYA----TARDLVAIAGTSRLSPYLRFGVLSPR-- 248
Query: 147 YHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEA 206
+ P P S G+L+WREF+ P+ R P+ +I W +
Sbjct: 249 --QCVVAARAAPSGPGPESWIGELIWREFYIQVLYHFPHALRGSFKPVYDRIVWPNDPAL 306
Query: 207 LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLL 266
A W +TG+P +DA M QL++EGW+H+ AR VA FLT+ DL + W G + F LL+
Sbjct: 307 FAAWQQGRTGYPIVDAAMRQLQQEGWMHNRARMIVASFLTK-DLLIDWRWGERHFMHLLI 365
Query: 267 DADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
D D + N G W W + + + Q +F + PV G+K DP+G ++
Sbjct: 366 DGDPAANNGGWQWAAGTGTDAQPYFRIFNPVSQGQKFDPDGAYV 409
>gi|448310167|ref|ZP_21500013.1| deoxyribodipyrimidine photolyase [Natronolimnobius innermongolicus
JCM 12255]
gi|445608328|gb|ELY62179.1| deoxyribodipyrimidine photolyase [Natronolimnobius innermongolicus
JCM 12255]
Length = 468
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 120/254 (47%), Gaps = 13/254 (5%)
Query: 62 PLRDDHDEKYG--VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPK 119
P DD + G +P+ LGFD PPT T A RRLE + A + + +
Sbjct: 163 PTEDDLADPNGEPIPSPSALGFDEPESTPPTVT--PTAARRRLESFCD--ANIYRYADER 218
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFF 176
P + S+ LS L++G + R Y + +R S+ QL WREF+
Sbjct: 219 DVPSAGATSR--LSIHLKWGTVGVRTVYDATDAAAERASDDDDRKSVAAFQRQLAWREFY 276
Query: 177 YCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHL 236
NP + +IPW + + LA W +TGFP +DA M QLR EGWIH+
Sbjct: 277 VHVLAFNPETVTENFSGYENEIPWRNDPDELAAWKAGETGFPIVDAGMRQLRREGWIHNR 336
Query: 237 ARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCP 295
R VA FLT+ DL + W +G F LL D D + + G W W S + Q +F + P
Sbjct: 337 VRMLVAAFLTK-DLLIDWRKGYAHFRRLLADHDTASDVGGWQWAASTGTDAQPYFRVFNP 395
Query: 296 VKFGRKADPNGDFI 309
K GR+ DP+ ++
Sbjct: 396 SKQGREYDPDATYV 409
>gi|229918519|ref|YP_002887165.1| deoxyribodipyrimidine photo-lyase [Exiguobacterium sp. AT1b]
gi|229469948|gb|ACQ71720.1| Deoxyribodipyrimidine photo-lyase [Exiguobacterium sp. AT1b]
Length = 450
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 111/221 (50%), Gaps = 11/221 (4%)
Query: 91 WKG-GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHD 149
WKG GETEA +RL R + + + + + P +A + LSP+LR G LS R
Sbjct: 192 WKGLGETEAKKRLTRFVNDR--MVDYDEKRDIPS--IAGTSRLSPYLRTGVLSIRTITEQ 247
Query: 150 LNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAK 209
+ L R K + + +LLWREF+Y + N I W+ N E K
Sbjct: 248 V--LSARQSKGRD--TYYDELLWREFYYMVMAKFHGLKDQPFNDKYKSIEWEDNEEQFEK 303
Query: 210 WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDAD 269
W N +TG+P +DA M QL E GW+H+ R VA FL++ L + W +G + F++ L+D +
Sbjct: 304 WCNGETGYPIVDAAMRQLNETGWMHNRLRMIVASFLSKH-LLLDWRKGERYFEQKLIDYE 362
Query: 270 WSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G W W S + +F + P + DP+G FI
Sbjct: 363 AASNIGGWQWAASVGTDAVPYFRIFNPTTQSERFDPDGTFI 403
>gi|332662834|ref|YP_004445622.1| DASH family cryptochrome [Haliscomenobacter hydrossis DSM 1100]
gi|332331648|gb|AEE48749.1| cryptochrome, DASH family [Haliscomenobacter hydrossis DSM 1100]
Length = 454
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 126/245 (51%), Gaps = 12/245 (4%)
Query: 73 VPTLEELGFDIEGLLPP-----TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+P+LEELG +++ ++KGGETE ++RL+ +L + ++ K T LL
Sbjct: 193 IPSLEELGHNVDDFAKDPRAVLSFKGGETEGIKRLQYYLWETDLIKNY---KETRNGLLG 249
Query: 128 SQ--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L GCLS +L YH+L K + L +LLWR+FF + N
Sbjct: 250 GDYSSKLSPWLAQGCLSPKLIYHELKKYEAQRGANESTYWLFFELLWRDFFRFMGKKYGN 309
Query: 186 FDRMLGNPICVQIP-WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+G P W N + L KW + TG P+IDA M +L+ G++ + R VA F
Sbjct: 310 KIFQIGGTRGQADPRWTENPQVLQKWIDGTTGVPFIDANMLELKHTGFMSNRGRQNVASF 369
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADP 304
L + DL ++W+ G + F+ +L+D D N G W +++ + + + ++ DP
Sbjct: 370 LVK-DLNINWQMGAEYFESILIDYDVCSNWGNWNYIAGVGSDPREDRYFNTLTQAKRYDP 428
Query: 305 NGDFI 309
+GD++
Sbjct: 429 HGDYV 433
>gi|407796462|ref|ZP_11143416.1| deoxyribodipyrimidine photo-lyase [Salimicrobium sp. MJ3]
gi|407019247|gb|EKE31965.1| deoxyribodipyrimidine photo-lyase [Salimicrobium sp. MJ3]
Length = 472
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 109/219 (49%), Gaps = 10/219 (4%)
Query: 94 GETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLN 151
GE A +RL R L+ + R P SL+ S +LR G +S R YH +
Sbjct: 201 GEEAAEQRLTRFLDEPIYYYDEDRDIPSKDGTSLM------SRYLRTGAISPRTVYHRVQ 254
Query: 152 KLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWA 211
+ K+ S +L +R+F++ +P D IPW+ + E +W
Sbjct: 255 QETDGRKRQDGVESFIRELAFRDFYHMVYYNHPEADDQELTEKFRDIPWNEDEEIFDRWK 314
Query: 212 NAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWS 271
A+TGFP+IDA M Q+ E GW+H+ AR AVA FLT+ DL + W +G + F+ L D + +
Sbjct: 315 EARTGFPFIDAAMAQMNESGWMHNRARMAVASFLTK-DLLIDWRKGERYFNRKLADYEAA 373
Query: 272 VNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
N G W W S + +F + PV+ + D +GD+I
Sbjct: 374 SNIGGWQWAASTGTDAVPYFRVFNPVRQSERFDKHGDYI 412
>gi|422759394|ref|ZP_16813156.1| deoxyribodipyrimidine photolyase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322412229|gb|EFY03137.1| deoxyribodipyrimidine photolyase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 474
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPP---LSLHGQLLWREFFYCAATRNPNFDR 188
LSP+LR G +S R +Y+ + +AP +L WR+F++ NPN +
Sbjct: 231 LSPYLRLGMVSIR-------TVYQAVSQAPASSGQAVFLKELAWRDFYHMVYVANPNQKK 283
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+ + WD N W QTG+P IDA M QLR GW+H+ R VA FLT+
Sbjct: 284 LAIQEAFRHLEWDENPATFKAWKEGQTGYPIIDAAMKQLRATGWMHNRLRMVVASFLTK- 342
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G F E L+D D + N G W W S + +F + PV G++ DP+GD
Sbjct: 343 DLQIDWRLGEAYFQEQLIDYDAASNIGGWQWAASVGTDAVPYFRIFNPVTQGKRFDPDGD 402
Query: 308 FI 309
FI
Sbjct: 403 FI 404
>gi|254422518|ref|ZP_05036236.1| deoxyribodipyrimidine photolyase family [Synechococcus sp. PCC
7335]
gi|196190007|gb|EDX84971.1| deoxyribodipyrimidine photolyase family [Synechococcus sp. PCC
7335]
Length = 480
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 12/242 (4%)
Query: 73 VPTLEELGFDIEG--LLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+PT + LG++ E LL P GE A+ +LE+ + + +A + + + P +A +
Sbjct: 192 LPTAKALGYEWENELLLQP----GEAAALAQLEKFCDDRRVIAEYDQQRDYPS--IAGTS 245
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFD 187
LS L+FG L R + + Y R + ++ +L WREF+ PN
Sbjct: 246 TLSAALKFGTLGIRTVWEAASDAYSRARSEETHRNIRTWQQELAWREFYQSVMYTFPNLA 305
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
PWD + + W +TG+P +DA M QL + GW+H+ R VA FLT+
Sbjct: 306 EGPYREPLKDFPWDNDEDLFQAWCEGKTGYPIVDAAMRQLNQTGWMHNRCRMIVASFLTK 365
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G K F + L D D S N G W W + S + + P +K DP +
Sbjct: 366 -DLIIDWRWGEKYFMQHLFDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAKKYDPEAE 424
Query: 308 FI 309
+I
Sbjct: 425 YI 426
>gi|156744316|ref|YP_001434445.1| deoxyribodipyrimidine photo-lyase [Roseiflexus castenholzii DSM
13941]
gi|156235644|gb|ABU60427.1| Deoxyribodipyrimidine photo-lyase [Roseiflexus castenholzii DSM
13941]
Length = 487
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 130/266 (48%), Gaps = 18/266 (6%)
Query: 51 VTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKA 110
+ P L+R A + D VP +LG + +PP GGET RL ++ A
Sbjct: 170 IEPPLLRPAPEAVADQ-----TVPDHADLGIVVSQRIPP---GGETHGAARLAAFVDLAA 221
Query: 111 WVASFGRPKMTPQSLLA--SQTGLSPFLRFGCLSTRLFYHDLNKLYKRI----KKAPPPL 164
+ G + + LLA + + LSP+LRFGC++ R +L + +
Sbjct: 222 AHSIAGYAE--GRDLLAEPATSRLSPYLRFGCVAPRQALRAALRLLDIVGDDHRTVRSIE 279
Query: 165 SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIM 224
+ G+L WR+F+Y P+ R P + W+ + W +TG+P IDA M
Sbjct: 280 TWIGELAWRDFYYQILWHYPHVVRRSFKPQYDALAWENDPALFDAWKEGRTGYPIIDAAM 339
Query: 225 TQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS- 283
QLR+E W+H+ AR VA FLT+ DL + W G + F + L+D D + N G W W + +
Sbjct: 340 HQLRQEAWMHNRARMIVASFLTK-DLLIDWRWGERYFMQQLVDGDHAANNGGWQWSAGTG 398
Query: 284 SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ Q +F + PV G+K DP G ++
Sbjct: 399 TDAQPYFRIFNPVSQGQKFDPKGLYV 424
>gi|193216116|ref|YP_001997315.1| deoxyribodipyrimidine photo-lyase [Chloroherpeton thalassium ATCC
35110]
gi|193089593|gb|ACF14868.1| Deoxyribodipyrimidine photo-lyase [Chloroherpeton thalassium ATCC
35110]
Length = 477
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 141/304 (46%), Gaps = 35/304 (11%)
Query: 17 RRIIEKNGG-KTPLTYHQFQ--SIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGV 73
+R+++ NG T T +Q + ++ + +P PA ++ + P D +K+ V
Sbjct: 136 QRVLKDNGQPYTVFTPYQKKWLALSGNIPTPQPALTRISTPELPSIPLPKTSDIRKKFSV 195
Query: 74 PTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTG 131
P +GGE + ++RL L + + R P SLL++
Sbjct: 196 Q--------------PIVQGGEPKGLKRLRAFLSQNIYHYKELRDFPATNATSLLSAD-- 239
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPL-----SLHGQLLWREFFYCAATRNPNF 186
LRFG LS R +H+ +L + +A P + +L+WREF++ P+
Sbjct: 240 ----LRFGTLSIRHVFHESMRL---VPQASEPAREGIQTFISELIWREFYFQILDHFPHV 292
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
++ P + W+ N W N QTG+P +DA M LR+ GW+H+ R VA FLT
Sbjct: 293 EKHSFKPEFENLKWENNEVFFEAWKNGQTGYPIVDAAMRALRQTGWMHNRLRMIVASFLT 352
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPN 305
+ DL + W G F + L+D D + N G W W S + Q +F + PV +K DP
Sbjct: 353 K-DLLIDWRWGELYFMQHLIDGDLAANNGGWQWSASTGTDAQPYFRIFNPVLQSQKFDPK 411
Query: 306 GDFI 309
G+FI
Sbjct: 412 GEFI 415
>gi|320160751|ref|YP_004173975.1| deoxyribodipyrimidine photolyase [Anaerolinea thermophila UNI-1]
gi|319994604|dbj|BAJ63375.1| deoxyribodipyrimidine photolyase [Anaerolinea thermophila UNI-1]
Length = 466
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE EA+RRLE L A + GR ++ + LSP+ RFG LS R + K+
Sbjct: 188 GELEALRRLENFLSGPAREYADGRNRLDQ----PGTSFLSPYFRFGMLSPRWAVFQVRKM 243
Query: 154 YKRIKKAPPPLSLH----GQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAK 209
+ I +P + +L+WREF+ P+ M NP I W L
Sbjct: 244 IQ-ITSSPDEKRGYEAWLNELIWREFYISILYHYPHVLAMAFNPALRAIEWRDAPSELQA 302
Query: 210 WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDAD 269
W +TG+P +DA M QL+ GW+H+ AR VA FLT+ DL ++W+EG + F + L+D D
Sbjct: 303 WKEGKTGYPVVDAAMRQLKATGWMHNRARMIVASFLTK-DLLINWQEGEQWFMQNLVDGD 361
Query: 270 WSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G W W + + +F + PV K DP G +I
Sbjct: 362 PAANNGGWQWTAGVGTDAAPYFRIFNPVLQSAKFDPQGRYI 402
>gi|433459950|ref|ZP_20417586.1| deoxyribodipyrimidine photo-lyase [Halobacillus sp. BAB-2008]
gi|432192066|gb|ELK48979.1| deoxyribodipyrimidine photo-lyase [Halobacillus sp. BAB-2008]
Length = 474
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 125/271 (46%), Gaps = 19/271 (7%)
Query: 44 PSPAEAPVTPLLVRQATTPLRDDHDEKYGV--PTLEELGFDIEGLLPPTWKGGETEAMRR 101
P PA V L+++A R E LE++ D G+ GE +A R
Sbjct: 159 PKPAVQKVDDELLKKAAVDERASFKEGESAYADLLEKIEADFGGV-------GEADAWAR 211
Query: 102 LERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK 159
LE+ L+ + R P + SL+ S +LR G +S R YH ++ KK
Sbjct: 212 LEQFLDADIYDYDERRDFPAVDGTSLM------SRYLRTGAISVRSVYHQIHDQVDFRKK 265
Query: 160 APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPW 219
+ +L WR+F+ PN IPW+ + + L +W +TGFP
Sbjct: 266 TEGVETYISELAWRDFYNMIYHFYPNAHDEEVVEKYQGIPWNNDEDVLERWKEGRTGFPI 325
Query: 220 IDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW 279
IDA M QL E GW+H+ R AVA FLT+ DL + W +G + F E L+D D + N G W W
Sbjct: 326 IDAAMRQLNESGWMHNRLRMAVASFLTK-DLLMDWRKGERYFQEKLVDYDPASNIGGWQW 384
Query: 280 -LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
S + +F + P + + DP+G FI
Sbjct: 385 AASTGTDPVPYFRVFNPTRQSERFDPHGRFI 415
>gi|66910424|gb|AAH97079.1| Cry4 protein [Danio rerio]
Length = 418
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 86/143 (60%), Gaps = 4/143 (2%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKY 71
+L +RI++ NGG PLTY +F +++ + P V+ ++ TP+ D D Y
Sbjct: 132 TLYDVKRIVKANGGSPPLTYKKFLHVLSVLGEPEKPARDVSIEDFQRCVTPV--DVDRVY 189
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
VP+L LG +E + W GGE+ A++RLE+H + + WVA+F +P+ P SLL S TG
Sbjct: 190 AVPSLAHLGLQVEAEV--LWPGGESHALQRLEKHFQSQGWVANFSKPRTIPNSLLPSTTG 247
Query: 132 LSPFLRFGCLSTRLFYHDLNKLY 154
LSP+L GCLS R FYH +++
Sbjct: 248 LSPYLSLGCLSVRTFYHKYTRIF 270
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAAT---- 181
+A + GL + C+S L+ D+ ++ K +PP L +++F + +
Sbjct: 117 VAQENGLQTYT---CVSHTLY--DVKRIVKANGGSPP-------LTYKKFLHVLSVLGEP 164
Query: 182 RNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
P D + + P DV+ A + A G ++ E + L +H
Sbjct: 165 EKPARDVSIEDFQRCVTPVDVD-RVYAVPSLAHLGLQVEAEVLWPGGESHALQRLEKH-- 221
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWM-WLSCSSFFQQFFHCYCPVKFGR 300
F ++G WV+ + LL + ++ + + LS +F+ ++ +CPV+FGR
Sbjct: 222 --FQSQG--WVANFSKPRTIPNSLLPSTTGLSPYLSLGCLSVRTFYHKYTRIFCPVRFGR 277
Query: 301 KADPNGDFI 309
+ DP G+++
Sbjct: 278 RTDPQGEYL 286
>gi|226941562|ref|YP_002796636.1| PhrB [Laribacter hongkongensis HLHK9]
gi|226716489|gb|ACO75627.1| PhrB [Laribacter hongkongensis HLHK9]
Length = 469
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 128/274 (46%), Gaps = 20/274 (7%)
Query: 38 VAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETE 97
+A++ AE PV P L R P + +P+L +GF GL W+ G T
Sbjct: 158 LARLAPADMAEWPVAPYLDRLCPLPAQP-------LPSLASMGFTDTGLAALGWQAGSTG 210
Query: 98 AMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI 157
A L + L R + + + P L + + LSP LRFG LS R L +L
Sbjct: 211 AQAALAQFLPR---LPLYHEERDFPA--LDATSRLSPHLRFGTLSVR----QLVRLATDA 261
Query: 158 KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNMEALAKWANAQTG 216
L+ +L+WR+F++ P + P+ Q+ W + A W +TG
Sbjct: 262 GHEGAQAWLN-ELVWRDFYHQVLWHRPQLAQGHAFKPVYDQLDWPGEADHFAAWTEGRTG 320
Query: 217 FPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGM 276
+P +DA M QLR+ GW+H+ R A FL + DL + W G F E LLD D++ N G
Sbjct: 321 YPLVDAAMRQLRQTGWMHNRLRMICASFLAK-DLLLDWRLGEAWFAECLLDFDFAANNGG 379
Query: 277 WMWLSCSSF-FQQFFHCYCPVKFGRKADPNGDFI 309
W W + + Q +F + PV RK DP+G FI
Sbjct: 380 WQWAASTGCDAQPYFRIFNPVSQSRKFDPDGHFI 413
>gi|58176791|pdb|1TEZ|A Chain A, Complex Between Dna And The Dna Photolyase From Anacystis
Nidulans
gi|58176792|pdb|1TEZ|B Chain B, Complex Between Dna And The Dna Photolyase From Anacystis
Nidulans
gi|58176793|pdb|1TEZ|C Chain C, Complex Between Dna And The Dna Photolyase From Anacystis
Nidulans
gi|58176794|pdb|1TEZ|D Chain D, Complex Between Dna And The Dna Photolyase From Anacystis
Nidulans
Length = 474
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 118/241 (48%), Gaps = 12/241 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+PTL++LGFD +G P + GET A+ RL+ +R +A + + P A +GL
Sbjct: 189 LPTLKQLGFDWDGGFPV--EPGETAAIARLQEFCDRA--IADYDPQRNFPAE--AGTSGL 242
Query: 133 SPFLRFGCLSTR--LFYHDLNKLYKRIKKAPPPLSL-HGQLLWREFFYCAATRNPNFDRM 189
SP L+FG + R R +A + + +L WREF+ A P+
Sbjct: 243 SPALKFGAIGIRQAWQAASAAHALSRSDEARNSIRVWQQELAWREFYQHALYHFPSLADG 302
Query: 190 LGNPICVQIPWDVNMEAL-AKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+ Q PW+ N EAL W AQTG+P +DA M QL E GW+H+ R VA FLT+
Sbjct: 303 PYRSLWQQFPWE-NREALFTAWTQAQTGYPIVDAAMRQLTETGWMHNRCRMIVASFLTK- 360
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
DL + W G + F + L+D D + N G W W + S + + P +K D +
Sbjct: 361 DLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDPKPLRIFNPASQAKKFDATATY 420
Query: 309 I 309
I
Sbjct: 421 I 421
>gi|81298923|ref|YP_399131.1| deoxyribodipyrimidine photo-lyase type I [Synechococcus elongatus
PCC 7942]
gi|79621|pir||S00757 deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) [validated] -
Synechococcus sp. (Anacystis nidulans)
gi|48425154|pdb|1OWL|A Chain A, Structure Of Apophotolyase From Anacystis Nidulans
gi|48425155|pdb|1OWM|A Chain A, Data1:dna Photolyase RECEIVED X-Rays Dose 1.2 Exp15
PhotonsMM2
gi|48425156|pdb|1OWN|A Chain A, Data3:dna Photolyase RECEIVED X-Rays Dose 4.8 Exp15
PhotonsMM2
gi|48425157|pdb|1OWO|A Chain A, Data4:photoreduced Dna Photolyase RECEIVED X-Rays Dose
1.2 Exp15 PhotonsMM2
gi|48425158|pdb|1OWP|A Chain A, Data6:photoreduced Dna Pholyase RECEIVED X-Rays Dose 4.8
Exp15 PhotonsMM2
gi|157833609|pdb|1QNF|A Chain A, Structure Of Photolyase
gi|580717|emb|CAA30190.1| unnamed protein product [Synechococcus elongatus PCC 6301]
gi|81167804|gb|ABB56144.1| Deoxyribodipyrimidine photo-lyase type I [Synechococcus elongatus
PCC 7942]
Length = 484
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 118/241 (48%), Gaps = 12/241 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+PTL++LGFD +G P + GET A+ RL+ +R +A + + P A +GL
Sbjct: 190 LPTLKQLGFDWDGGFPV--EPGETAAIARLQEFCDRA--IADYDPQRNFPAE--AGTSGL 243
Query: 133 SPFLRFGCLSTR--LFYHDLNKLYKRIKKAPPPLSL-HGQLLWREFFYCAATRNPNFDRM 189
SP L+FG + R R +A + + +L WREF+ A P+
Sbjct: 244 SPALKFGAIGIRQAWQAASAAHALSRSDEARNSIRVWQQELAWREFYQHALYHFPSLADG 303
Query: 190 LGNPICVQIPWDVNMEAL-AKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+ Q PW+ N EAL W AQTG+P +DA M QL E GW+H+ R VA FLT+
Sbjct: 304 PYRSLWQQFPWE-NREALFTAWTQAQTGYPIVDAAMRQLTETGWMHNRCRMIVASFLTK- 361
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
DL + W G + F + L+D D + N G W W + S + + P +K D +
Sbjct: 362 DLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDPKPLRIFNPASQAKKFDATATY 421
Query: 309 I 309
I
Sbjct: 422 I 422
>gi|372487277|ref|YP_005026842.1| deoxyribodipyrimidine photolyase [Dechlorosoma suillum PS]
gi|359353830|gb|AEV25001.1| deoxyribodipyrimidine photolyase [Dechlorosoma suillum PS]
Length = 482
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 120/246 (48%), Gaps = 26/246 (10%)
Query: 72 GVPTLEELGF---DIEGL-LPPTWKGGET---EAMRRLERHLERKAWVASFGRPKMTPQS 124
GVP+L ++GF D+E + + P GG + +RLER+ E++ + A G
Sbjct: 186 GVPSLADIGFLPTDLERIGVVPGMSGGAARWQDFRQRLERYAEQRDFPAVKG-------- 237
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNP 184
+ LS +LRFGCLS R + + P + +L+WR+F++ R P
Sbjct: 238 ----VSYLSVYLRFGCLSIRQLAGEAWR-----SGGPGAATWLSELIWRDFYFMVLDRFP 288
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
P ++ WD LA W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 289 QLPDGCFKPEFDRVLWDEAPALLAAWREGRTGYPLVDAAMRQLAQTGWMHNRLRMVVASF 348
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G F +LLLD D S N G W W + + Q +F + PV K D
Sbjct: 349 LTK-DLGLDWRLGEGHFADLLLDFDLSANNGGWQWAASTGCDAQPWFRIFNPVTQSEKFD 407
Query: 304 PNGDFI 309
P G FI
Sbjct: 408 PQGRFI 413
>gi|297585056|ref|YP_003700836.1| deoxyribodipyrimidine photo-lyase [Bacillus selenitireducens MLS10]
gi|297143513|gb|ADI00271.1| Deoxyribodipyrimidine photo-lyase [Bacillus selenitireducens MLS10]
Length = 474
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 9/222 (4%)
Query: 90 TWKG-GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
TW+ GE A RLE+ + + + +G + P +A + LSP+L+ G LS YH
Sbjct: 199 TWQALGEDHAHERLEQFVTDR--LTHYGESRDFPA--VAGTSRLSPYLKTGVLSVAQVYH 254
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALA 208
L+++ A ++ +L WR+F+ N + W+ + E L
Sbjct: 255 AAYPLFEKGDDAA--VTFIKELAWRDFYTMIHYHFENLRNQEFQEKYRTLSWNEDDELLE 312
Query: 209 KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDA 268
W QTGFP IDA M QL GW+H+ R A A FLT+ D + W EG + F E L+D
Sbjct: 313 YWKQGQTGFPLIDAAMRQLNTTGWMHNRLRMATASFLTK-DYRIDWREGERYFAEKLIDY 371
Query: 269 DWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
D + N G W W S + +F + PV+ ++ DP G FI
Sbjct: 372 DEASNTGGWQWAASVGTDAVPYFRVFNPVRQSKRFDPEGTFI 413
>gi|408402028|ref|YP_006859992.1| deoxyribodipyrimidine photolyase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|407968257|dbj|BAM61495.1| deoxyribodipyrimidine photolyase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 474
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPP---LSLHGQLLWREFFYCAATRNPNFDR 188
LSP+LR G +S R +Y+ + +AP +L WR+F++ NPN +
Sbjct: 231 LSPYLRLGMVSIR-------TVYQAVSQAPASSGQAVFLKELAWRDFYHMVYVANPNQKK 283
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+ + WD N A W QTG+P IDA M QL GW+H+ R VA FLT+
Sbjct: 284 LAIQEAFRHLEWDENPAAFKAWKEGQTGYPIIDAAMKQLLATGWMHNRLRMVVASFLTK- 342
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G F E L+D D + N G W W S + +F + PV G++ DP+G+
Sbjct: 343 DLQIDWRLGEAYFQEQLIDYDAASNIGGWQWAASVGTDAVPYFRIFNPVTQGKRFDPDGE 402
Query: 308 FI 309
FI
Sbjct: 403 FI 404
>gi|293321545|emb|CAZ66368.1| cryptochrome [Crateromorpha meyeri]
Length = 520
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 145/289 (50%), Gaps = 23/289 (7%)
Query: 29 LTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGL-- 86
+T +F I+ +M+ +T L + ++ P D +P+L E G E +
Sbjct: 142 ITRSEFFRIITQMEPELSLPEELTEFLSKFSSFP---DPFINKKIPSLSEFGITNETMSS 198
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ-SLLASQTGLSPFLRFGCLSTRL 145
+ ++GGET A+ +LE+ +A+ P P+ + L +SP ++FGC+S R
Sbjct: 199 IDTKFRGGETAAILQLEK------LIANRCEPNNLPKVAQLNQYDAISPAIKFGCISVRT 252
Query: 146 FYHDLNKL---YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDV 202
Y+ ++KL Y +K ++ L R++ PN D G+ +PWDV
Sbjct: 253 IYNRVSKLEPKYNEVKN-----QIYDGLRNRDYCILVGGNCPNIDNQ-GSIYTYILPWDV 306
Query: 203 NMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFD 262
+A ++ +TG+P+IDA + QL+ EG+IH+ ++ + LT +W+ W EG+++F
Sbjct: 307 KQDASTRFQTGRTGYPFIDAAIAQLKREGFIHNSVKNILVRTLTCDLMWIGWHEGVRMFY 366
Query: 263 ELLLDADWSVNAGMWMWLSCSSFFQQFFHC--YCPVKFGRKADPNGDFI 309
+ LD + ++ A WM S S++ + P++ ++ D +GD+I
Sbjct: 367 KWSLDYNAAICALSWMHGSKSTWLLEEISISQINPIEEAKEIDKDGDYI 415
>gi|386317413|ref|YP_006013577.1| deoxyribodipyrimidine photolyase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|410495305|ref|YP_006905151.1| deoxyribodipyrimidine photolyase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417752618|ref|ZP_12400804.1| putative deoxyribodipyrimidine photo-lyase [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|323127700|gb|ADX24997.1| deoxyribodipyrimidine photolyase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333771615|gb|EGL48541.1| putative deoxyribodipyrimidine photo-lyase [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|410440465|emb|CCI63093.1| deoxyribodipyrimidine photolyase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 474
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPP---LSLHGQLLWREFFYCAATRNPNFDR 188
LSP+LR G +S R +Y+ + +AP +L WR+F++ NPN +
Sbjct: 231 LSPYLRLGMVSIR-------TVYQAVSQAPASSGQAVFLKELAWRDFYHMVYVANPNQKK 283
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+ + WD N A W QTG+P IDA M QL GW+H+ R VA FLT+
Sbjct: 284 LAIQEAFRHLEWDENPAAFKAWKEGQTGYPIIDAAMKQLLATGWMHNRLRMVVASFLTK- 342
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G F E L+D D + N G W W S + +F + PV G++ DP+G+
Sbjct: 343 DLQIDWRLGEAYFQEQLIDYDAASNIGGWQWAASVGTDAVPYFRIFNPVTQGKRFDPDGE 402
Query: 308 FI 309
FI
Sbjct: 403 FI 404
>gi|251782896|ref|YP_002997199.1| deoxyribodipyrimidine photolyase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242391526|dbj|BAH81985.1| deoxyribodipyrimidine photolyase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 474
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPP---LSLHGQLLWREFFYCAATRNPNFDR 188
LSP+LR G +S R +Y+ + +AP +L WR+F++ NPN +
Sbjct: 231 LSPYLRLGMVSIR-------TVYQAVSQAPASSGQAVFLKELAWRDFYHMVYVANPNQKK 283
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+ + WD N A W QTG+P IDA M QL GW+H+ R VA FLT+
Sbjct: 284 LAIQEAFRHLEWDENPAAFKAWKEGQTGYPIIDAAMKQLLATGWMHNRLRMVVASFLTK- 342
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G F E L+D D + N G W W S + +F + PV G++ DP+G+
Sbjct: 343 DLQIDWRLGEAYFQEQLIDYDAASNIGGWQWAASVGTDAVPYFRIFNPVTQGKRFDPDGE 402
Query: 308 FI 309
FI
Sbjct: 403 FI 404
>gi|417927065|ref|ZP_12570453.1| putative deoxyribodipyrimidine photo-lyase [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
gi|340764939|gb|EGR87465.1| putative deoxyribodipyrimidine photo-lyase [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
Length = 474
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPP---LSLHGQLLWREFFYCAATRNPNFDR 188
LSP+LR G +S R +Y+ + +AP +L WR+F++ NPN +
Sbjct: 231 LSPYLRLGMVSIR-------TVYQAVSQAPASSGQAVFLKELAWRDFYHMVYVANPNQKK 283
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+ + WD N A W QTG+P IDA M QL GW+H+ R VA FLT+
Sbjct: 284 LAIQEAFRHLEWDENPAAFKAWKEGQTGYPIIDAAMKQLLATGWMHNRLRMVVASFLTK- 342
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G F E L+D D + N G W W S + +F + PV G++ DP+G+
Sbjct: 343 DLQIDWRLGEAYFQEQLIDYDAASNIGGWQWAASVGTDAVPYFRIFNPVTQGKRFDPDGE 402
Query: 308 FI 309
FI
Sbjct: 403 FI 404
>gi|428773120|ref|YP_007164908.1| deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific)
[Cyanobacterium stanieri PCC 7202]
gi|428687399|gb|AFZ47259.1| deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific)
[Cyanobacterium stanieri PCC 7202]
Length = 486
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 126/247 (51%), Gaps = 19/247 (7%)
Query: 73 VPTLEELGF-----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+PTL +LG D G+L T+ GGETEA++RL+ +L ++++ K T +L
Sbjct: 189 IPTLSDLGLEEFTKDDRGVL--TFMGGETEAIKRLQYYLWETDNISNY---KKTRNGMLG 243
Query: 128 SQ--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFF--YCAATRN 183
+ SP+L GCLS RL Y ++ K + K L +LLWR+FF C N
Sbjct: 244 GDYSSKFSPWLAQGCLSPRLIYTEIEKYEQERVKNDSTYWLIFELLWRDFFRFTCLKYGN 303
Query: 184 PNFDRM-LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
F + L N +QIPW N W +TG+P IDA M +L+ G++ + R VA
Sbjct: 304 SVFHKSGLQN---IQIPWQENQNLFELWCQGKTGYPLIDANMRELKATGFMSNRGRQNVA 360
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKA 302
FLT+ +L ++W+ G + F+ LL+D D N G W + + + F + K +
Sbjct: 361 SFLTK-NLGINWQMGAEWFESLLIDYDVCSNWGNWNYTAGVGNDARGFRYFNIPKQSKDY 419
Query: 303 DPNGDFI 309
D GD++
Sbjct: 420 DYQGDYL 426
>gi|448345411|ref|ZP_21534308.1| deoxyribodipyrimidine photolyase [Natrinema altunense JCM 12890]
gi|445635409|gb|ELY88579.1| deoxyribodipyrimidine photolyase [Natrinema altunense JCM 12890]
Length = 469
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 131/300 (43%), Gaps = 33/300 (11%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEEL 79
I N G + F D +PA+ P + L + P +PTL +L
Sbjct: 133 ITPNQGDHYSVFSYFWKKWRDRDKRAPADEPESSDLAAVSGDP----------IPTLADL 182
Query: 80 GFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL------ASQTGLS 133
GFD PPT T A R ER VA F + + L + + LS
Sbjct: 183 GFDEPEATPPTVT---TAAAR------ER---VADFCSGPIYEYAALRDYPAESGTSRLS 230
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRML 190
P L++G + R Y + R ++ S+ QL WREF+ NPN
Sbjct: 231 PHLKWGTIGPRELYAATERAADRAERDADRESVREFQRQLAWREFYAHVLAFNPNTVTED 290
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
+ +I W + +AL W TG+P IDA M QLR +GW+H+ R VA FLT+ DL
Sbjct: 291 FSGYDNEIDWRDDPDALEAWKAGTTGYPIIDAGMRQLRADGWMHNRVRMLVASFLTK-DL 349
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWL-SCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F E L D D + + G W W S + Q +F + P+K GR+ DP+ ++I
Sbjct: 350 LTDWRAGYAWFREKLADHDTANDVGGWQWAGSTGTDAQPYFRVFNPMKQGREYDPDAEYI 409
>gi|347754095|ref|YP_004861659.1| deoxyribodipyrimidine photo-lyase type I [Candidatus
Chloracidobacterium thermophilum B]
gi|347586613|gb|AEP11143.1| deoxyribodipyrimidine photo-lyase type I [Candidatus
Chloracidobacterium thermophilum B]
Length = 475
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 113/238 (47%), Gaps = 13/238 (5%)
Query: 74 PTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG-L 132
P+L++LGF PP GGET A RL+ ++ R L A T L
Sbjct: 182 PSLKDLGFATSVSPPP---GGETSAQARLQGFIQN-----GLARYATERDVLSADGTSRL 233
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGN 192
SP+LRFGCLS R Y + + +P S +L+WR+F+ P +
Sbjct: 234 SPYLRFGCLSPRRAYWAAREAVP--EGSPGMESWIAELIWRDFYRQILFHFPYVETGAFR 291
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+ W+ N W +TGFP +DA M QL GW+H+ AR VA FLT+ DL +
Sbjct: 292 RAYDDLAWENNASWFDLWCQGKTGFPIVDAAMRQLLTTGWMHNRARMIVASFLTK-DLLI 350
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G + F + L+D D + N G W W S + Q +F + P G+K DP G ++
Sbjct: 351 DWRWGERHFMKHLVDGDLAANNGGWQWAASTGTDAQPYFRIFNPTAQGKKFDPTGAYV 408
>gi|421499090|ref|ZP_15946150.1| deoxyribodipyrimidine photolyase [Aeromonas media WS]
gi|407181883|gb|EKE55880.1| deoxyribodipyrimidine photolyase [Aeromonas media WS]
Length = 474
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 117/242 (48%), Gaps = 13/242 (5%)
Query: 76 LEELGFDIEGL----LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
L E F EGL L P W GE EA+RRL LE+ V +G + P LA +
Sbjct: 184 LAERAFVDEGLGELTLDPRWPVGEAEALRRLHAFLEQG--VLDYGETRDFPA--LAGTSI 239
Query: 132 LSPFLRFGCLSTRLFYHDLN-KLYKRIK-KAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
LSP+L G +S R L +L R + KA P +L+WREF+ P
Sbjct: 240 LSPYLAAGIVSPRQCVAALQQRLGARPQSKAQPGFVWLNELIWREFYRHLLVLIPTLSMN 299
Query: 190 LG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
P V +PW + +A A W +TG+P +DA M L GW+H+ R VA FLT+
Sbjct: 300 RPFKPETVALPWSWDPDAFAAWCAGRTGYPIVDAAMRCLNATGWMHNRLRMIVASFLTK- 358
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G F L+D D + N G W W + + + +F + P G++ DP G+
Sbjct: 359 DLHIHWRLGEDYFMSQLIDGDLAANNGGWQWAAGTGADAAPYFRVFNPTTQGQRFDPQGE 418
Query: 308 FI 309
FI
Sbjct: 419 FI 420
>gi|443927307|gb|ELU45814.1| cryptochrome-2 [Rhizoctonia solani AG-1 IA]
Length = 572
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 88/156 (56%), Gaps = 26/156 (16%)
Query: 128 SQTGLSPFLRFGCLSTRLFY---------------HDLNKLYKRI--KKAPPPLSLHGQL 170
S T +SP+L+FGC+ R Y +D + + R K A P +L GQL
Sbjct: 299 STTLMSPYLKFGCVGVRECYWSWHDILVYVELHCPYDCSHIVPRNAPKSAKKPENLLGQL 358
Query: 171 LWREFFY----CAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQ 226
EF Y C + + D+++ P Q P E LA WA +TGFPWIDA+M Q
Sbjct: 359 ---EFSYIPWRCQTVYSDDGDQVIPRPKDDQHPQ--AEEWLAAWAEGRTGFPWIDALMRQ 413
Query: 227 LREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFD 262
LREEGW+HHL RH+VACFLTRG ++SWE G ++FD
Sbjct: 414 LREEGWMHHLGRHSVACFLTRGQCYISWERGAEVFD 449
>gi|407477681|ref|YP_006791558.1| deoxyribodipyrimidine photo-lyase [Exiguobacterium antarcticum B7]
gi|407061760|gb|AFS70950.1| Deoxyribodipyrimidine photo-lyase [Exiguobacterium antarcticum B7]
Length = 451
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 136/291 (46%), Gaps = 20/291 (6%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEEL 79
++KN G + +++ K + P P +T L R T + + V ++
Sbjct: 133 VKKNDGSYYKVFTPYKNAFLKKELPVPYSVNLTCLQERYQTRR----QNNTFMVEYFKQA 188
Query: 80 GFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFG 139
G D+ +K GE +A +RL++ L+ +AS+ + P + + +S +LR G
Sbjct: 189 GSDV------AFKPGEEQAKKRLDQFLQTS--LASYEEQRDVPS--IDGTSLMSRYLRTG 238
Query: 140 CLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
+ R + +++ + + + +L+WREF+Y P R+ N I
Sbjct: 239 EIGIRTIFEAVSQK----EDSKGKQTYITELIWREFYYTILLHYPEAKRLPVNEQYTNIE 294
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ + + W +TG+P +DA M QL GW+H+ R VA FLT+ DL + W++G +
Sbjct: 295 WEEDEKGFQAWCEGKTGYPIVDAAMRQLNTTGWMHNRLRMIVASFLTK-DLLIDWQKGER 353
Query: 260 IFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F + L+D + + N G W W S + +F + P +K D +G FI
Sbjct: 354 YFQQKLVDYEAASNIGGWQWAASVGTDAVPYFRVFNPTTQSKKFDKDGTFI 404
>gi|163849034|ref|YP_001637078.1| deoxyribodipyrimidine photo-lyase [Chloroflexus aurantiacus
J-10-fl]
gi|222527000|ref|YP_002571471.1| deoxyribodipyrimidine photo-lyase [Chloroflexus sp. Y-400-fl]
gi|163670323|gb|ABY36689.1| Deoxyribodipyrimidine photo-lyase [Chloroflexus aurantiacus
J-10-fl]
gi|222450879|gb|ACM55145.1| Deoxyribodipyrimidine photo-lyase [Chloroflexus sp. Y-400-fl]
Length = 479
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+P L +L D LP + GE A+ LER + + GR M +A + L
Sbjct: 182 LPHLTDLLPDAPATLP-RFPAGEAVALEALERFVRGPLASYAQGRDLMA----VAGTSRL 236
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGN 192
SP+LR G LS R S G+L+WR+F+ P+ R
Sbjct: 237 SPYLRLGVLSPRQCVAAALAAPPGPGPE----SWIGELIWRDFYVQVLYHFPHALRGSFK 292
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
P +I W + A W TG+P +DA M QL+ EGW+H+ AR VA FLT+ DL +
Sbjct: 293 PAYNRIDWPNDPVLFAAWQQGLTGYPIVDAAMRQLQREGWMHNRARMIVASFLTK-DLLI 351
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
W G + F LL+D D + N G W W + + + Q FF + PV G+K DP G ++
Sbjct: 352 DWRWGERHFMHLLIDGDPAANNGGWQWAAGTGTDAQPFFRIFNPVSQGQKFDPEGAYV 409
>gi|453328412|dbj|GAC89303.1| deoxyribodipyrimidine photolyase [Gluconobacter thailandicus NBRC
3255]
Length = 483
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 131/294 (44%), Gaps = 18/294 (6%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGV--PTLE 77
++ G+ + F D P P + P + PL DD KY + TL
Sbjct: 146 VQTKEGRFYQVFTAFWKAFQSQDVPVPLDPPA-----HLSFHPLPDDLLSKYRLDETTLL 200
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
D L TW+ GE EA LE L GR +M + + LSP+L
Sbjct: 201 PTHPDWAAGLRATWEPGEREAHEHLEDFLRHDCARYGKGRDEMGREGT----SRLSPYLA 256
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF-DRMLGNPICV 196
G +S R + + K + A LS ++ WREF P D LG
Sbjct: 257 SGAISPRQVWEAIQKKGAHDEGARIFLS---EIGWREFAKYTLFHQPRLPDVSLGQKFG- 312
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
++PW + + L W +TG P +DA M QL + GW+H+ AR V FLT+ L + W +
Sbjct: 313 KMPWRKSEQDLTAWQQGRTGVPVVDAGMRQLWKTGWMHNRARMIVGSFLTK-HLLIDWRQ 371
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
G F + L+DADW+ NA W W++ + FF + P + G K DP+GD+I
Sbjct: 372 GEAWFRDTLVDADWASNAMNWQWVAGTGIDASPFFRIFNPTRQGVKFDPDGDYI 425
>gi|414342179|ref|YP_006983700.1| deoxyribodipyrimidine photolyase [Gluconobacter oxydans H24]
gi|411027514|gb|AFW00769.1| deoxyribodipyrimidine photolyase [Gluconobacter oxydans H24]
Length = 502
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 131/294 (44%), Gaps = 18/294 (6%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGV--PTLE 77
++ G+ + F D P P + P + PL DD KY + TL
Sbjct: 165 VQTKEGRFYQVFTAFWKAFQSQDVPVPLDPPA-----HLSFHPLPDDLLSKYRLDETTLL 219
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
D L TW+ GE EA LE L GR +M + + LSP+L
Sbjct: 220 PTHPDWAAGLRATWEPGEREAHEHLEDFLRHDCARYGKGRDEMGREGT----SRLSPYLA 275
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF-DRMLGNPICV 196
G +S R + + K + A LS ++ WREF P D LG
Sbjct: 276 SGAISPRQVWEAIQKKGAHDEGARIFLS---EIGWREFAKYTLFHQPRLPDVSLGQKFG- 331
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
++PW + + L W +TG P +DA M QL + GW+H+ AR V FLT+ L + W +
Sbjct: 332 KMPWRKSEQDLTAWQQGRTGVPVVDAGMRQLWKTGWMHNRARMIVGSFLTK-HLLIDWRQ 390
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
G F + L+DADW+ NA W W++ + FF + P + G K DP+GD+I
Sbjct: 391 GEAWFRDTLVDADWASNAMNWQWVAGTGIDASPFFRIFNPTRQGVKFDPDGDYI 444
>gi|56751401|ref|YP_172102.1| DNA photolyase [Synechococcus elongatus PCC 6301]
gi|118595452|sp|P05327.4|PHR_SYNP6 RecName: Full=Deoxyribodipyrimidine photo-lyase; AltName: Full=DNA
photolyase; AltName: Full=Photoreactivating enzyme
gi|56686360|dbj|BAD79582.1| DNA photolyase [Synechococcus elongatus PCC 6301]
Length = 484
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 117/241 (48%), Gaps = 12/241 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+PTL++LGFD +G P + GET A+ RL+ +R +A + + P A +GL
Sbjct: 190 LPTLKQLGFDWDGGFPV--EPGETAAIARLQEFCDRA--IADYDPQRNFPAE--AGTSGL 243
Query: 133 SPFLRFGCLSTR--LFYHDLNKLYKRIKKAPPPLSL-HGQLLWREFFYCAATRNPNFDRM 189
SP L+FG + R R +A + + +L WREF+ A P+
Sbjct: 244 SPALKFGAIGIRQAWRAASAAHALSRSDEARNSIRVWQQELAWREFYQHALYHFPSLADG 303
Query: 190 LGNPICVQIPWDVNMEAL-AKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+ Q PW+ N EAL W AQTG+P +DA M QL E GW+H+ VA FLT+
Sbjct: 304 PYRSLWQQFPWE-NREALFTAWTQAQTGYPIVDAAMRQLTETGWMHNRCWMIVASFLTK- 361
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
DL + W G + F + L+D D + N G W W + S + + P +K D +
Sbjct: 362 DLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDPKPLRIFNPASQAKKFDATATY 421
Query: 309 I 309
I
Sbjct: 422 I 422
>gi|433461813|ref|ZP_20419414.1| DASH family cryptochrome [Halobacillus sp. BAB-2008]
gi|432189636|gb|ELK46722.1| DASH family cryptochrome [Halobacillus sp. BAB-2008]
Length = 481
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 139/285 (48%), Gaps = 15/285 (5%)
Query: 28 PLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLL 87
P T+ QF+ + K + S +A P QA P+ + +PTLE LGFD
Sbjct: 149 PDTFSQFRKRLEKSGT-SVRKAIAPPAPEDQAELPVPEG-----DIPTLETLGFD-PADE 201
Query: 88 PPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFGCLSTRL 145
P + GG +EA +RL ++ K + + K T +L + SP+L GCLS R+
Sbjct: 202 APRYPGGSSEARKRLIDYIFTKDRLKIY---KQTRNGMLKEDDSSKFSPYLANGCLSPRV 258
Query: 146 FYHDLNKLYKRIKKA-PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNM 204
Y + + Y+R A L+ +LLWR++F+ + + IPW+ +
Sbjct: 259 VYEQI-QAYERTNGANESTYMLYFELLWRDYFHLVHRKYGDRIFYRSGLSGKAIPWERDE 317
Query: 205 EALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDEL 264
+ L W + +TG+P +DA M +L+E G++ + R VA F T+ +L + W G + F+
Sbjct: 318 QLLQAWIDGKTGYPLVDAGMRELKETGFLSNRGRQNVASFFTK-NLGLDWRIGARWFESQ 376
Query: 265 LLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L+D D S N G W++++ F + K + DP+G ++
Sbjct: 377 LVDYDVSSNYGNWLYIAGVGNDAVPFRAFNVEKQAKDYDPDGSYL 421
>gi|428776176|ref|YP_007167963.1| deoxyribodipyrimidine photo-lyase type I [Halothece sp. PCC 7418]
gi|428690455|gb|AFZ43749.1| deoxyribodipyrimidine photo-lyase type I [Halothece sp. PCC 7418]
Length = 477
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 115/243 (47%), Gaps = 10/243 (4%)
Query: 70 KYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ 129
K +PTL +LG + LP GET A RLE+ +R + + + + P +
Sbjct: 187 KISLPTLNDLGLTWDNDLPLL--PGETAARERLEQFCDRA--ILDYDQNRNYP--AIDGT 240
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNF 186
+ LS L+FG +S R + L++ + ++ +L WREF+ A P
Sbjct: 241 SVLSAALKFGAISIREIWQTTVTLWEDTRSDEARDNITAWRQELAWREFYQHALYFFPEL 300
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
PWD N + W + +TG+P +DA M QL GW+H+ R VA FLT
Sbjct: 301 ADGPDRDQFKDFPWDNNPDHFQAWCDGKTGYPIVDAAMRQLNTTGWMHNRCRMIVASFLT 360
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
+ DL ++W+ G K F + L D D + N G W W + S + + P +K DP+G
Sbjct: 361 K-DLIINWQWGEKYFMQTLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQAQKFDPDG 419
Query: 307 DFI 309
++I
Sbjct: 420 EYI 422
>gi|244539057|dbj|BAH83100.1| deoxyribodipyrimidine photolyas [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 477
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 105/220 (47%), Gaps = 11/220 (5%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE A+ LE K + S+ P L S + LSP+L G +S R + L
Sbjct: 203 GEESALNLLEIFCSTK--ITSYATQTNLPS--LYSTSYLSPYLAVGIISPRQCLNTLLNH 258
Query: 154 YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC---VQIPWDVNMEALAKW 210
Y + + +S QL+WREF+ + P +G P I W+ + E L W
Sbjct: 259 YPNLLENNIAVSWFNQLIWREFYNHTLAKYPFL--CMGKPYIDWTNNIVWNTDEEHLIAW 316
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
N TG+P IDA M QL GW+H+ R A FL + DL + W G K F LLD +
Sbjct: 317 QNGYTGYPIIDAGMRQLNSTGWMHNRIRMITASFLVK-DLLIDWRIGEKYFMLHLLDGNL 375
Query: 271 SVNAGMWMWLSCSSFFQ-QFFHCYCPVKFGRKADPNGDFI 309
++N G W W+S + +F + P G+K DPNGDFI
Sbjct: 376 ALNNGNWQWISSTGNNSWPYFRSFNPTTQGKKIDPNGDFI 415
>gi|422303261|ref|ZP_16390615.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9806]
gi|389791796|emb|CCI12426.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9806]
Length = 474
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 111/248 (44%), Gaps = 10/248 (4%)
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
D E +PTLE LGF + LP T GE A RLE + + ++ + P
Sbjct: 179 DKLTETINLPTLENLGFTWQNPLPLT--PGEKAAHSRLEEFCQ--GVINNYQEDRNFP-- 232
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAAT 181
+ LS L+FG + R + +L + + S+ +L WREF+
Sbjct: 233 AFDGTSRLSAALKFGAIGIRTIWTATLELLENCRAEEAKNSIITWQQELAWREFYQHCLY 292
Query: 182 RNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
P PW N E W QTG+P +DA M QL E GW+H+ R V
Sbjct: 293 FFPELAEGAYRKEFRHFPWQDNEEHFQAWCQGQTGYPIVDAAMRQLNETGWMHNRCRMIV 352
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRK 301
A FLT+ DL ++W++G K F + L D D + N G W W + S + + P +K
Sbjct: 353 ASFLTK-DLIINWQKGEKYFMQKLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQTQK 411
Query: 302 ADPNGDFI 309
DP G++I
Sbjct: 412 FDPEGEYI 419
>gi|117618175|ref|YP_855643.1| deoxyribodipyrimidine photolyase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559582|gb|ABK36530.1| deoxyribodipyrimidine photolyase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 473
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 108/225 (48%), Gaps = 9/225 (4%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P W GE EA RRL LE+ V +G + P +A + LSP+L G +S R
Sbjct: 201 PRWPVGEAEASRRLNDFLEQA--VLDYGETRDFPA--IAGTSVLSPYLAAGIISPRQCVA 256
Query: 149 DLNKL--YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNME 205
L + Y+ KA P +L+WREF+ + P P +PW + +
Sbjct: 257 ALQQRLGYRPQSKAQPGFVWLNELIWREFYRHLLVQIPTLSMNRPFKPETAALPWSWDPD 316
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
A A W +TG+P +DA M L GW+H+ R VA FLT+ DL + W G F L
Sbjct: 317 AFAAWCEGRTGYPIVDAAMRCLNATGWMHNRLRMIVASFLTK-DLHIHWRLGEDYFMSRL 375
Query: 266 LDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W + + + +F + P G++ DP G+FI
Sbjct: 376 IDGDLAANNGGWQWAAGTGADAAPYFRVFNPTTQGQRFDPQGEFI 420
>gi|67925725|ref|ZP_00519034.1| Deoxyribodipyrimidine photolyase [Crocosphaera watsonii WH 8501]
gi|67852431|gb|EAM47881.1| Deoxyribodipyrimidine photolyase [Crocosphaera watsonii WH 8501]
Length = 486
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 138/292 (47%), Gaps = 23/292 (7%)
Query: 26 KTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG-VPTLEEL----- 79
K P + F+ V K + V P+L+ + LR D + G VP+LEEL
Sbjct: 150 KLPEVFTSFRKKVEK-------NSTVNPILI--SPRKLRSLPDIEVGNVPSLEELELEKP 200
Query: 80 GFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLR 137
+D G+L +KGGETE ++RL + + + + K T +L + + SP+L
Sbjct: 201 KYDSRGVL--EFKGGETEGIQRLNNYFWERNCLKEY---KETRNGMLGADYSSKFSPWLA 255
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
GCLS R Y ++ K ++ K L +LLWR++F + ++ N V
Sbjct: 256 NGCLSPRYIYEEVQKYEEKRIKNNSTYWLIFELLWRDYFRFISAKHGNKIFYQSGLQGVD 315
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
IPW + E W TG+P +D M +L G++ + R VA FLT+ +L ++W G
Sbjct: 316 IPWKEDQERFKLWQEGNTGYPLVDGNMRELAATGFMSNRGRQNVASFLTK-NLGINWIMG 374
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ F+ LL+D D N G W + + + F + K + DP G++I
Sbjct: 375 AEWFESLLIDYDVCSNYGNWNYTAGVGNDARGFRYFNIPKQSKDYDPKGEYI 426
>gi|381182363|ref|ZP_09891174.1| deoxyribodipyrimidine photolyase [Listeriaceae bacterium TTU
M1-001]
gi|380317741|gb|EIA21049.1| deoxyribodipyrimidine photolyase [Listeriaceae bacterium TTU
M1-001]
Length = 463
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 16/221 (7%)
Query: 93 GGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNK 152
GE +A+++L+ + K + ++ + + P L + + LSP++R G +S R
Sbjct: 197 SGEKQALKQLDTFI--KHHLHTYEKNRDFPA--LDATSRLSPYIRTGAISIRT------- 245
Query: 153 LYKRIKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAK 209
+Y + +AP + +L WR+F++ NP+ + + W+ N K
Sbjct: 246 VYDAVMQAPYSEGRETFMKELAWRDFYHMIYKENPHQKNLEIKEHYRGLNWNTNQAHFDK 305
Query: 210 WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDAD 269
W QTGFP +DA M QL E GW+H+ R VA FLT+ DL W G + F+E+L+D D
Sbjct: 306 WKKGQTGFPIVDAAMRQLNETGWMHNRLRMIVASFLTK-DLLTDWRLGERYFEEMLIDYD 364
Query: 270 WSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G W W S + +F + P G + DP+G FI
Sbjct: 365 PASNIGGWQWAASTGTDAVPYFRIFNPTTQGERFDPHGHFI 405
>gi|428769113|ref|YP_007160903.1| deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific)
[Cyanobacterium aponinum PCC 10605]
gi|428683392|gb|AFZ52859.1| deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific)
[Cyanobacterium aponinum PCC 10605]
Length = 491
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 121/246 (49%), Gaps = 15/246 (6%)
Query: 72 GVPTLEELG---FDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
+P L +LG F++ L +KGGETEA++RL+ + K + + K T +L
Sbjct: 193 NIPILSDLGLENFEVSQLAVLPFKGGETEAIKRLKSYFWEKDCLKVY---KETRNGMLGG 249
Query: 129 Q--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
+ SP+L GCLS R Y ++ K + K L +LLWR+FF A + N
Sbjct: 250 DYSSKFSPWLALGCLSPRYIYEEVEKYEQERVKNDSTYWLIFELLWRDFFRFTAVKYGN- 308
Query: 187 DRMLGNPICVQ---IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
L P +Q IPW N W QTG+P IDA M +L+ G++ + R VA
Sbjct: 309 --RLFYPSGIQNISIPWQENWLIFEAWCEGQTGYPLIDANMRELKTTGFMSNRGRQNVAS 366
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLT+ +L ++W+ G + F+ LL+D D N G W + + + F + K + D
Sbjct: 367 FLTK-NLGINWQMGAEWFESLLIDYDVCSNWGNWNYTAGIGNDARGFRYFNIPKQSKDYD 425
Query: 304 PNGDFI 309
GD++
Sbjct: 426 YRGDYL 431
>gi|423205555|ref|ZP_17192111.1| hypothetical protein HMPREF1168_01746 [Aeromonas veronii AMC34]
gi|404623830|gb|EKB20679.1| hypothetical protein HMPREF1168_01746 [Aeromonas veronii AMC34]
Length = 473
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 108/225 (48%), Gaps = 9/225 (4%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P W GE EA+RRL LE+ V +G + P +A + LSP+L G +S R
Sbjct: 201 PRWPVGEVEALRRLNIFLEQA--VLDYGETRDFPA--IAGTSVLSPYLAAGIISPRQCVA 256
Query: 149 DLNKL--YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNME 205
L + Y+ KA P +L+WREF+ P P +PW + +
Sbjct: 257 ALQQRLGYRPQSKAQPGFVWLNELVWREFYRHLLVLIPTLSMNRPFKPETADLPWSWDPD 316
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
A A W +TG+P +DA M L GW+H+ R VA FLT+ DL + W G F L
Sbjct: 317 AFAAWCEGRTGYPIVDAAMRCLNATGWMHNRLRMIVASFLTK-DLHIHWRLGEDYFMSRL 375
Query: 266 LDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W + + + +F + P G++ DP G+FI
Sbjct: 376 IDGDLAANNGGWQWAAGTGADAAPYFRVFNPTTQGQRFDPQGEFI 420
>gi|423202670|ref|ZP_17189249.1| hypothetical protein HMPREF1167_02832 [Aeromonas veronii AER39]
gi|404614866|gb|EKB11845.1| hypothetical protein HMPREF1167_02832 [Aeromonas veronii AER39]
Length = 473
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 113/237 (47%), Gaps = 12/237 (5%)
Query: 77 EELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
E LG E + P W GE EA+RRL LE+ V +G + P +A + LSP+L
Sbjct: 192 EALG---ELTVDPHWPVGEAEALRRLNIFLEQA--VLDYGETRDFPA--IAGTSVLSPYL 244
Query: 137 RFGCLSTRLFYHDLNKL--YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NP 193
G +S R L + Y+ KA P +L+WREF+ P P
Sbjct: 245 AAGIISPRQCVAALQQRLGYRPQSKAQPGFVWLNELIWREFYRHLLVLIPTLSMNRPFKP 304
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+PW + +A A W +TG+P +DA M L GW+H+ R VA FLT+ DL +
Sbjct: 305 ETAALPWSWDPDAFAAWCEGRTGYPIVDAAMRCLNATGWMHNRLRMIVASFLTK-DLHIH 363
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F L+D D + N G W W + + + +F + P G++ DP G+FI
Sbjct: 364 WRLGEDYFMSRLIDGDLAANNGGWQWAAGTGADAAPYFRVFNPTTQGQRFDPQGEFI 420
>gi|28625001|emb|CAD24679.1| photolyase related protein [Aphrocallistes vastus]
Length = 563
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 117/227 (51%), Gaps = 14/227 (6%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
++GGE L + E + S G +P + A G+SP LRFGC++ R H
Sbjct: 260 FQGGERRTEDYLNEYREARLRDVS-GDEDASP--IAAKAMGISPHLRFGCITPR---HLF 313
Query: 151 NKLYKRIKKAPPPL----SLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNM- 204
N L K IK A + ++ R+F + +R++ N IC+ IPWD N
Sbjct: 314 NFLVKTIKDANYSRIKINKVLAGIMARDFALQVSQLQTIPERIISLNKICLPIPWDKNNN 373
Query: 205 EALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDEL 264
E + K +AQTGFP+ DA +TQL+ EG++ + A+A F+T LWVSWEEG F +
Sbjct: 374 EIVEKLTDAQTGFPFFDAAITQLKTEGYVINEVSEALATFVTNSLLWVSWEEGQNFFSQH 433
Query: 265 LLDADWSVNAGMWMWLSCSSFFQQFFHCYC-PVKF-GRKADPNGDFI 309
L+ D +++ W+ S S+ Y P+ F +K DPNG++I
Sbjct: 434 LICFDLAMSTHSWLEASGSTMVTGRQKSYQDPLLFVSKKLDPNGEYI 480
>gi|428222871|ref|YP_007107041.1| DASH family cryptochrome [Synechococcus sp. PCC 7502]
gi|427996211|gb|AFY74906.1| cryptochrome, DASH family [Synechococcus sp. PCC 7502]
Length = 501
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 123/242 (50%), Gaps = 9/242 (3%)
Query: 73 VPTLEELGFDIEGLLPPT---WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ 129
+PTLEELG + P + GGET+A+ RL+ + + +A++ K T ++L
Sbjct: 188 MPTLEELGLEPAIADPRAVIKFIGGETQALERLDYYFWQSDLIATY---KETRNAMLGGN 244
Query: 130 --TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFD 187
+ SP+L GC+S R Y + K + K L +LLWR++F AT++ N
Sbjct: 245 YSSKFSPWLALGCISPRYIYAQIQKYEQERIKNDSTYWLVFELLWRDYFRFIATKHGNRI 304
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
+ + +PW +++ W +TGFP IDA M +L G++ + R VA FLT+
Sbjct: 305 FKVSGLQGINLPWSEDLDKFKLWQMGKTGFPLIDANMQELAATGFMSNRGRQNVASFLTK 364
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
++ ++W+ G + F+ +L+D D N G W + + + F + +K + DP G
Sbjct: 365 -NMGINWQLGAEWFESMLIDYDVCSNWGNWNYTAGVGNDARGFRYFNILKQSQDYDPEGK 423
Query: 308 FI 309
++
Sbjct: 424 YV 425
>gi|448336574|ref|ZP_21525671.1| deoxyribodipyrimidine photolyase [Natrinema pallidum DSM 3751]
gi|445628896|gb|ELY82195.1| deoxyribodipyrimidine photolyase [Natrinema pallidum DSM 3751]
Length = 469
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 113/244 (46%), Gaps = 17/244 (6%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVAS---FGRPKMTPQSLLASQ 129
+PTL +LG D PPT T A R ER A S + M +
Sbjct: 176 IPTLADLGVDEPEATPPTVT---TAAAR------ERVADFCSGPIYEYAAMRDYPAESGT 226
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNF 186
+ LSP L++G + R Y + R ++ S+ QL WREF+ NPN
Sbjct: 227 SRLSPHLKWGTIGPRELYAATERAADRAERDADRESVREFQRQLAWREFYAHVLAFNPNT 286
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
+ +I W + +AL W TG+P +DA M QLR +GW+H+ R VA FLT
Sbjct: 287 VTENFSGYENEIDWRDDPDALEAWKAGTTGYPIVDAGMRQLRADGWMHNRVRMLVASFLT 346
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL-SCSSFFQQFFHCYCPVKFGRKADPN 305
+ DL W G F E L D D + + G W W S + Q +F + P+K GR+ DP+
Sbjct: 347 K-DLLTDWRAGYAWFREKLADHDTANDVGGWQWAGSTGTDAQPYFRVFNPMKQGREYDPD 405
Query: 306 GDFI 309
++I
Sbjct: 406 AEYI 409
>gi|330830812|ref|YP_004393764.1| deoxyribodipyrimidine photolyase [Aeromonas veronii B565]
gi|423208514|ref|ZP_17195068.1| hypothetical protein HMPREF1169_00586 [Aeromonas veronii AER397]
gi|328805948|gb|AEB51147.1| Deoxyribodipyrimidine photolyase [Aeromonas veronii B565]
gi|404618359|gb|EKB15279.1| hypothetical protein HMPREF1169_00586 [Aeromonas veronii AER397]
Length = 473
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 111/226 (49%), Gaps = 11/226 (4%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P W GE EA+RRL LE+ V +G + P +A + LSP+L G +S R
Sbjct: 201 PRWPVGEAEALRRLNIFLEQA--VLDYGETRDFPA--IAGTSVLSPYLAAGIISPRQCVA 256
Query: 149 DLNKL--YKRIKKAPPPLSLHGQLLWREFFYCAATRNP--NFDRMLGNPICVQIPWDVNM 204
L + Y+ KA P +L+WREF+ P + +R P +PW +
Sbjct: 257 VLQQRLGYRPQSKAQPGFVWLNELIWREFYRHLLVLIPALSMNRPF-KPETAALPWSWDP 315
Query: 205 EALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDEL 264
+A A W +TG+P +DA M L GW+H+ R VA FLT+ DL + W G F
Sbjct: 316 DAFAAWCEGRTGYPIVDAAMRCLNTTGWMHNRLRMIVASFLTK-DLHIHWRLGEDYFMSR 374
Query: 265 LLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
L+D D + N G W W + + + +F + P G++ DP G+FI
Sbjct: 375 LIDGDLAANNGGWQWAAGTGADAAPYFRVFNPTTQGQRFDPQGEFI 420
>gi|300710895|ref|YP_003736709.1| deoxyribodipyrimidine photo-lyase [Halalkalicoccus jeotgali B3]
gi|448297012|ref|ZP_21487062.1| deoxyribodipyrimidine photolyase [Halalkalicoccus jeotgali B3]
gi|299124578|gb|ADJ14917.1| deoxyribodipyrimidine photo-lyase [Halalkalicoccus jeotgali B3]
gi|445580689|gb|ELY35067.1| deoxyribodipyrimidine photolyase [Halalkalicoccus jeotgali B3]
Length = 459
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 118/273 (43%), Gaps = 24/273 (8%)
Query: 42 DSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDI-EGLLPPTWKGGETEAMR 100
D P P AP + D D+ G+P L +LGF+ EG +P G A
Sbjct: 150 DKPDPVSAPESV-----------SDPDDPGGIPALSDLGFEAPEGSVP---DAGPDAAEN 195
Query: 101 RLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA 160
RLE + + + + P S+ LS L+FG + R Y
Sbjct: 196 RLETFCD--GPIRRYEEDRDYPSRGGTSR--LSVDLKFGTVGIRRVYAATENAKAEAGSK 251
Query: 161 PPPLSL---HGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGF 217
S+ QL WREF+ +PN +I W + E W +TG+
Sbjct: 252 EERGSVEEFQSQLAWREFYTQVLYYHPNVVTKNYKTYDGEIEWRTDEEGFDAWTEGKTGY 311
Query: 218 PWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMW 277
P +DA M QLREE W+H+ R VA FLT+ DL V W EG F + L+D D + G W
Sbjct: 312 PIVDAGMRQLREESWMHNRVRMLVAAFLTK-DLLVDWREGYDWFRKHLVDHDTGNDTGGW 370
Query: 278 MW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W S + Q +F + P+ G + DP+ ++I
Sbjct: 371 QWAASTGTDAQPYFRIFNPMTQGERYDPDAEYI 403
>gi|406675941|ref|ZP_11083127.1| hypothetical protein HMPREF1170_01335 [Aeromonas veronii AMC35]
gi|404626164|gb|EKB22974.1| hypothetical protein HMPREF1170_01335 [Aeromonas veronii AMC35]
Length = 473
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 114/241 (47%), Gaps = 19/241 (7%)
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
TL EL D P W GE EA RRL LE+ V +G + P +A + LSP
Sbjct: 193 TLGELTTD------PRWPVGEAEARRRLNDFLEQA--VLDYGETRDFPA--IAGTSVLSP 242
Query: 135 FLRFGCLSTRLFYHDLNKL--YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGN 192
+L G +S R L + Y+ KA P +L+WREF+ P +
Sbjct: 243 YLAAGIISPRQCVAALQQRLGYRPQSKAQPGFVWLNELIWREFYRHLLVLIPTLS--MNR 300
Query: 193 PICVQ---IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
P + +PW + +A A W +TG+P +DA M L GW+H+ R VA FLT+ D
Sbjct: 301 PFKAETAALPWSWDPDAFAAWCEGRTGYPIVDAAMRCLNTTGWMHNRLRMIVASFLTK-D 359
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDF 308
L + W G F L+D D + N G W W + + + +F + P G++ DP G+F
Sbjct: 360 LHIHWRLGEDYFMSRLIDGDLAANNGGWQWAAGTGADAAPYFRVFNPTTQGQRFDPQGEF 419
Query: 309 I 309
I
Sbjct: 420 I 420
>gi|425471493|ref|ZP_18850353.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9701]
gi|389882607|emb|CCI36943.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9701]
Length = 474
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 111/248 (44%), Gaps = 10/248 (4%)
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
D E +PTLE LGF + LP T GE A RLE + + ++ + P
Sbjct: 179 DKLTETINLPTLENLGFTWQNPLPLT--PGEKAAHSRLEEFCQ--GVINNYQEDRNFP-- 232
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAAT 181
+ LS L+FG + R + +L + + S+ +L WREF+
Sbjct: 233 AFDGTSRLSAALKFGAIGIRTIWTATLELLENCRAEEAKDSIITWQQELAWREFYQHCLY 292
Query: 182 RNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
P PW N E W +TG+P +DA M QL E GW+H+ R V
Sbjct: 293 FFPELAEGAYRKEFRHFPWQDNEEHFQAWCQGKTGYPIVDAAMRQLNETGWMHNRCRMIV 352
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRK 301
A FLT+ DL ++W++G K F + L D D + N G W W + S + + P +K
Sbjct: 353 ASFLTK-DLIINWQKGEKYFMQKLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQTQK 411
Query: 302 ADPNGDFI 309
DP G++I
Sbjct: 412 FDPEGEYI 419
>gi|254414764|ref|ZP_05028529.1| deoxyribodipyrimidine photolyase family [Coleofasciculus
chthonoplastes PCC 7420]
gi|196178612|gb|EDX73611.1| deoxyribodipyrimidine photolyase family [Coleofasciculus
chthonoplastes PCC 7420]
Length = 475
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 118/269 (43%), Gaps = 17/269 (6%)
Query: 49 APVTPLLVRQATTPLRDDHDEKYGV---PTLEELGF--DIEGLLPPTWKGGETEAMRRLE 103
AP L + T D +K GV PT +ELGF D +L P GE A +RLE
Sbjct: 163 APAESLKNGEGLTETEQDVVKKVGVMELPTAKELGFTWDNSLMLEP----GEKAAKQRLE 218
Query: 104 RHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPP 163
+R + + + P + + LS L+FG + R + +R +
Sbjct: 219 EFCDRA--IDDYQHQRNLP--AIDGTSRLSAALKFGAIGIRTVWQATQTAIERSRSDETR 274
Query: 164 LSLHG---QLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWI 220
+ +L WREF+ A P PWD N W +TG+P +
Sbjct: 275 DGIQTWQQELAWREFYQHALYFFPELASGPYRDTFENFPWDNNQTLFQAWCEGRTGYPIV 334
Query: 221 DAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL 280
DA M QL + GW+H+ R VA FLT+ DL ++W+ G F + L D D + N G W W
Sbjct: 335 DAAMRQLNQTGWMHNRCRMIVASFLTK-DLIINWQWGETYFMQKLYDGDLAANNGGWQWS 393
Query: 281 SCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ S + + P +K DP+G++I
Sbjct: 394 ASSGMDPKPLRIFNPASQAQKYDPDGEYI 422
>gi|322369279|ref|ZP_08043844.1| deoxyribodipyrimidine photo-lyase [Haladaptatus paucihalophilus
DX253]
gi|320551011|gb|EFW92660.1| deoxyribodipyrimidine photo-lyase [Haladaptatus paucihalophilus
DX253]
Length = 464
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 13/247 (5%)
Query: 68 DEKYGVPTLEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
+E +PTL +LGF D E +PP TEA R L V + + + P
Sbjct: 170 EEGIEIPTLADLGFEDPEAEIPP----AGTEAARDLLSAFCEDD-VYRYDKARDYPAR-- 222
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRN 183
S + LSP L+FG + R + + + S+ GQL WREF+
Sbjct: 223 ESTSRLSPHLKFGTVGIREVWEATERAKDAAESEDAAESVEEFQGQLAWREFYAHVLDDT 282
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P+ I W + + + W + +TG+P +DA M QLREE W+H+ R +A
Sbjct: 283 PSVVVENYKDYQYDIAWRDDPDGVRAWKDGETGYPIVDAGMRQLREEAWVHNRVRMIIAS 342
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKA 302
FLT+ DL V W EG + L+D D + + G W W S + Q +F + P G +
Sbjct: 343 FLTK-DLLVDWREGYDWYRRKLVDHDTANDNGGWQWAASTGTDAQPYFRVFNPTTQGERF 401
Query: 303 DPNGDFI 309
DP+ ++I
Sbjct: 402 DPDAEYI 408
>gi|428779785|ref|YP_007171571.1| deoxyribodipyrimidine photolyase [Dactylococcopsis salina PCC 8305]
gi|428694064|gb|AFZ50214.1| deoxyribodipyrimidine photolyase [Dactylococcopsis salina PCC 8305]
Length = 476
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 10/240 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+P L +LGF E LP T GE+ A RL+ +R + + + + P + + L
Sbjct: 189 LPKLNDLGFSWENELPLT--PGESAARDRLQWFCDRA--ILDYDQNRNYP--AIEGTSIL 242
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNFDRM 189
S L+FG + R + N+ + + +++ +L WREF+ A P +
Sbjct: 243 SAALKFGAIGIREVWEATNQAEENTRSDEARDNINAWRQELAWREFYQHALYFFPELAKG 302
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
PW+ N + W N +TG+P +DA M QL GW+H+ R VA FLT+ D
Sbjct: 303 PYREQFKSFPWENNQDHFEAWCNGETGYPIVDAAMRQLNTTGWMHNRCRMIVASFLTK-D 361
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L ++W+ G F + L D D + N G W W + S + + P +K DP+G++I
Sbjct: 362 LIINWQWGEAYFMQTLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQAQKFDPDGEYI 421
>gi|425452606|ref|ZP_18832423.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 7941]
gi|389765542|emb|CCI08602.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 7941]
Length = 474
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 111/244 (45%), Gaps = 10/244 (4%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
E +PTLE LGF + LP T GE A+ RLE + + ++ + P
Sbjct: 183 ETINLPTLENLGFTWQNPLPLT--PGEKAALSRLEEFCQ--GVINNYQEDRNFP--AFDG 236
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPN 185
+ LS L+FG + R + +L + + S+ +L WREF+ P
Sbjct: 237 TSRLSAALKFGTIGIRTIWTATLELLENCRAEEAKNSIITWQQELAWREFYQHCLYFFPE 296
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
PW N E W +TG+P +DA M QL E GW+H+ R VA FL
Sbjct: 297 LAVGAYRKEFRHFPWQDNEEHFQAWCQGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFL 356
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
T+ DL ++W++G K F + L D D + N G W W + S + + P +K DP
Sbjct: 357 TK-DLIINWQKGEKYFMQKLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQTQKFDPE 415
Query: 306 GDFI 309
G++I
Sbjct: 416 GEYI 419
>gi|411010414|ref|ZP_11386743.1| deoxyribodipyrimidine photolyase [Aeromonas aquariorum AAK1]
Length = 473
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 107/225 (47%), Gaps = 9/225 (4%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P W GE EA RRL LE+ V +G + P +A + LSP+L G +S R
Sbjct: 201 PRWPVGEAEASRRLNDFLEQA--VLDYGETRDFPA--IAGTSVLSPYLAAGIISPRQCVA 256
Query: 149 DLNKL--YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNME 205
L + Y+ KA P +L+WREF+ P P +PW + +
Sbjct: 257 ALQQRLGYRPQSKAQPGFVWLNELIWREFYRHLLVLIPTLSMNRPFKPETSALPWSWDPD 316
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
A A W +TG+P +DA M L GW+H+ R VA FLT+ DL + W G F L
Sbjct: 317 AFAAWCEGRTGYPIVDAAMRCLNATGWMHNRLRMIVASFLTK-DLHIHWRLGEDYFMSRL 375
Query: 266 LDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W + + + +F + P G++ DP G+FI
Sbjct: 376 IDGDLAANNGGWQWAAGTGADAAPYFRVFNPTTQGQRFDPQGEFI 420
>gi|374292340|ref|YP_005039375.1| deoxyribodipyrimidine photo-lyase [Azospirillum lipoferum 4B]
gi|357424279|emb|CBS87146.1| Deoxyribodipyrimidine photo-lyase [Azospirillum lipoferum 4B]
Length = 494
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 106/221 (47%), Gaps = 7/221 (3%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GET A+ L L+ V ++ + P + LSP+L FG + R +H
Sbjct: 213 WVPGETAALSHLADFLDGP--VGAYATERDRPDR--DGTSALSPYLAFGEIGPRQVWHAA 268
Query: 151 NKLYKRIKKAPPPL-SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAK 209
+ P + S ++ WREF Y P +P PW + L
Sbjct: 269 RHAADARPELAPGIDSFLREVGWREFQYHLLHHAPELPDRPLDPRFADFPWREDAAGLLA 328
Query: 210 WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDAD 269
W +TG+P +DA M QL E GW+H+ R VA FL + DL + W+EG + F + L+DAD
Sbjct: 329 WQRGRTGYPIVDAGMRQLWETGWMHNRVRMIVASFLVK-DLLLPWQEGERWFWDTLVDAD 387
Query: 270 WSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ NAG W W++ C + FF + PV G K DP GD++
Sbjct: 388 LAQNAGNWQWVAGCGADAAPFFRVFNPVLQGEKFDPEGDYV 428
>gi|334121002|ref|ZP_08495078.1| Deoxyribodipyrimidine photo-lyase [Microcoleus vaginatus FGP-2]
gi|333455721|gb|EGK84364.1| Deoxyribodipyrimidine photo-lyase [Microcoleus vaginatus FGP-2]
Length = 504
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 128/297 (43%), Gaps = 16/297 (5%)
Query: 22 KNGGKTPLT-YHQFQSIVAKMDSPSPAEA-PVTPLLVRQATTPLRDDHDEKYG----VPT 75
++G KTP T Y F P E P+T L + T + + G VPT
Sbjct: 139 RSGTKTPYTIYTPFWKKWNSKPKAQPVETLPITYLELMTGLTTEEQELANEAGAIETVPT 198
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPF 135
LGF E P + GE A ++LE +R + + + +P SQ LS
Sbjct: 199 ASSLGFIWEN--PLVIEPGEDAAQQKLEEFCDRA--IYQYQGQRNSPAINGTSQ--LSAA 252
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRMLGN 192
L+FG + R + + S+ ++ WREF+ A P
Sbjct: 253 LKFGAIGIRTVWQATQIVMDTCHSEEAYTSIRTWQQEIAWREFYQHAMYNFPELADGPYR 312
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
P PWD + + W +TG+P IDA M QL + GW+H+ R VA FLT+ DL +
Sbjct: 313 PAFKDFPWDNDEKLFQAWCRGKTGYPIIDAAMRQLNQTGWMHNRCRMIVASFLTK-DLII 371
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+W+ G K F + L+D D N G W W + S + + P +K DP G++I
Sbjct: 372 NWQWGEKYFMQKLIDGDLCANNGGWQWSASSGMDPKPLRIFNPATQAQKFDPEGEYI 428
>gi|395763919|ref|ZP_10444588.1| deoxyribodipyrimidine photo-lyase [Janthinobacterium lividum PAMC
25724]
Length = 487
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 107/241 (44%), Gaps = 10/241 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+P+L ELGF+ L G + A E L R VA + + P L + L
Sbjct: 191 LPSLGELGFEASNLAELAIPTGMSGASELFEDFLAR---VARYDVARDFPA--LKGPSYL 245
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGN 192
S LRFG +S R + L R +L+WR+F+ +NP+
Sbjct: 246 SMHLRFGTVSLRYLVRSVVDLMDRGSGGDGAPVWLAELIWRDFYAMILYQNPHVAGAAFK 305
Query: 193 PICVQIPWDVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
P I W+ +EA A W +TG+P +DA M QL + G++H+ R ACFL + D
Sbjct: 306 PAYDAIAWETGLEADAAFAAWCEGRTGYPLVDAAMAQLNQTGYMHNRLRMVTACFLIK-D 364
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDF 308
L + W G F L D D + N G W W S S Q +F + PV K D NG F
Sbjct: 365 LGIDWRRGEAYFALHLNDFDLASNNGGWQWASSSGCDSQPYFRIFNPVTQSEKFDANGRF 424
Query: 309 I 309
I
Sbjct: 425 I 425
>gi|423197809|ref|ZP_17184392.1| hypothetical protein HMPREF1171_02424 [Aeromonas hydrophila SSU]
gi|404630927|gb|EKB27571.1| hypothetical protein HMPREF1171_02424 [Aeromonas hydrophila SSU]
Length = 473
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 106/225 (47%), Gaps = 9/225 (4%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P W GE EA RRL LE+ V +G + P +A + LSP+L G +S R
Sbjct: 201 PRWPVGEAEASRRLNDFLEQA--VLDYGETRDFPA--IAGTSVLSPYLAAGIISPRQCVA 256
Query: 149 DLNKL--YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNME 205
L + Y+ KA P +L+WREF+ P P +PW + +
Sbjct: 257 ALQQRLGYRPQSKAQPGFVWLNELIWREFYRHLLVLIPTLSMNRPFKPETSALPWSWDPD 316
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
A A W +TG+P +DA M L GW+H+ R VA FLT+ DL + W G F L
Sbjct: 317 AFAAWCEGRTGYPIVDAAMRCLNATGWMHNRLRMIVASFLTK-DLHIHWRLGEDYFMSRL 375
Query: 266 LDADWSVNAGMWMWLSCSSF-FQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W + + +F + P G++ DP G+FI
Sbjct: 376 IDGDLAANNGGWQWAAGTGADAAPYFRVFNPTTQGQRFDPQGEFI 420
>gi|423581405|ref|ZP_17557516.1| hypothetical protein IIA_02920 [Bacillus cereus VD014]
gi|401216170|gb|EJR22885.1| hypothetical protein IIA_02920 [Bacillus cereus VD014]
Length = 476
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MEAIWDPTEEGAYKVFKKFFSSKLAFYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NKLYKRIKK--APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWD 201
L YH L NK +R +S QL+WREF Y P N PW+
Sbjct: 247 LMYHYLINKSTERQCSLFEKQVISFIRQLIWREFSYYLLYHYPFTVYKPLNKNFEHFPWN 306
Query: 202 VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L +SW+EG K F
Sbjct: 307 KEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLISWQEGAKWF 365
Query: 262 DELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 366 MDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|289580258|ref|YP_003478724.1| deoxyribodipyrimidine photo-lyase [Natrialba magadii ATCC 43099]
gi|448281497|ref|ZP_21472802.1| deoxyribodipyrimidine photolyase [Natrialba magadii ATCC 43099]
gi|289529811|gb|ADD04162.1| Deoxyribodipyrimidine photo-lyase [Natrialba magadii ATCC 43099]
gi|445578544|gb|ELY32948.1| deoxyribodipyrimidine photolyase [Natrialba magadii ATCC 43099]
Length = 468
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 128/300 (42%), Gaps = 33/300 (11%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEEL 79
I G+T Y F + SP AP L + L P+ E L
Sbjct: 134 ITTQQGETYAVYSYFWKKWRDREKESPVSAPDGEQLASVSGDSL----------PSQEAL 183
Query: 80 GFDI-EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
GFD E +P G A RRLE + + + P + S GLSP L++
Sbjct: 184 GFDDPEATIP---DAGMEAARRRLETFCADP--IYRYADQRDDPAADATS--GLSPHLKW 236
Query: 139 GCLSTRLFYHDLNKLYKRIKKAPPPLS---LHGQLLWREFFYCAATRNP-----NFDRML 190
G + R Y L++ S QL WR F+ NP N+ R
Sbjct: 237 GTIGIRTVYEALDRAKSEAPDEAAADSCEEFESQLAWRAFYAHVLDTNPHTVTANY-RSY 295
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
NPI W + AL W + +TG+P +DA M QLR E ++H+ R VA FLT+ DL
Sbjct: 296 ENPIQ----WQTDAAALQAWKDGKTGYPIVDAGMRQLRAEAFMHNRLRMIVASFLTK-DL 350
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ W EG F E L D D + + G W W S + + Q +F + P+ G + DP+ ++I
Sbjct: 351 MLDWREGYAWFREKLADHDTASDVGGWQWASGTGTDAQPYFRIFNPMTQGERHDPDAEYI 410
>gi|365160129|ref|ZP_09356302.1| hypothetical protein HMPREF1014_01765 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363624172|gb|EHL75256.1| hypothetical protein HMPREF1014_01765 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 476
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MEAIWEPTEEGAYKTFKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NKLYKRIKK--APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWD 201
L YH L NK +R +S QL+WREF Y P N PWD
Sbjct: 247 LMYHYLINKSTERQCSFFEKQVISFIRQLIWREFSYYLLYHYPFTVYRPLNKSFENFPWD 306
Query: 202 VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F
Sbjct: 307 KEEELLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWF 365
Query: 262 DELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 366 MDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|427705816|ref|YP_007048193.1| deoxyribodipyrimidine photo-lyase type I [Nostoc sp. PCC 7107]
gi|427358321|gb|AFY41043.1| deoxyribodipyrimidine photo-lyase type I [Nostoc sp. PCC 7107]
Length = 479
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 128/296 (43%), Gaps = 20/296 (6%)
Query: 22 KNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG---VPTLEE 78
+ G TP T + + K + P PV L + TP + + G +PT ++
Sbjct: 140 RTGSNTPYTVY---TPFWKNWTSKPKAPPVATLQTVEGLTPAEQEIAQNAGAIPLPTAKD 196
Query: 79 LGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
LGF D + +L P GE A RL + + + + P + SQ LS L
Sbjct: 197 LGFIWDSDLILSP----GEASAQARLAEFTYKT--ITEYQEQRNFPATDGTSQ--LSAAL 248
Query: 137 RFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRMLGNP 193
+FG + R + + + S+ +L WREF+ A P
Sbjct: 249 KFGAIGIRTVWQATVAAQENSRSEETTTSIRTWQQELAWREFYQHAMYSFPELAEGAYRD 308
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
PW+ N W +TG+P +DA M QL + GW+H+ R VA FLT+ DL +S
Sbjct: 309 AFKNFPWETNDAHFQAWCEGKTGYPIVDAAMRQLNQSGWMHNRCRMIVASFLTK-DLLIS 367
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ G K F + L+D D S N G W W + S + + P +K DP+G++I
Sbjct: 368 PQLGEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPLRIFNPASQTQKFDPDGEYI 423
>gi|332711249|ref|ZP_08431182.1| deoxyribodipyrimidine photo-lyase type I [Moorea producens 3L]
gi|332350063|gb|EGJ29670.1| deoxyribodipyrimidine photo-lyase type I [Moorea producens 3L]
Length = 474
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 121/268 (45%), Gaps = 17/268 (6%)
Query: 50 PVTPLLVRQATTPLRDDHDEKYGV---PTLEELGF--DIEGLLPPTWKGGETEAMRRLER 104
PV L ++ T + D+ GV P+ +LG+ + E L+PP GE A LE
Sbjct: 164 PVATLTRVESLTEIEQDNALAAGVTDLPSAIDLGYVWENELLVPP----GEKVAQEILEE 219
Query: 105 HLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPL 164
+R + + + P + + LS L+FG + R + Y +
Sbjct: 220 FCDRT--IGDYHEQRNFPG--VDGTSKLSAALKFGVIGIRRVWQAAQNAYNLSRSDEARQ 275
Query: 165 SLHG---QLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWID 221
S+ +L WREF+ A P + PWD N E W +TG+P +D
Sbjct: 276 SIQTWQQELAWREFYQHAMYFFPELAQGPYRQKFQDFPWDNNPEFFQAWCEGKTGYPIVD 335
Query: 222 AIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS 281
A M QL + GW+H+ R VA FLT+ DL ++W+ G K F + L D D S N G W W +
Sbjct: 336 AAMRQLNQTGWMHNRCRMIVASFLTK-DLIINWQWGEKYFMQRLSDGDLSANNGGWQWSA 394
Query: 282 CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
S + + P +K DP+G++I
Sbjct: 395 SSGMDPKPLRIFNPASQAKKFDPDGEYI 422
>gi|422415100|ref|ZP_16492057.1| deoxyribodipyrimidine photo-lyase [Listeria innocua FSL J1-023]
gi|313624820|gb|EFR94752.1| deoxyribodipyrimidine photo-lyase [Listeria innocua FSL J1-023]
Length = 467
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 107/225 (47%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P + GE A RL + K +AS+ + + P L + LS +LR G +S R +
Sbjct: 189 PAFDSGEKAANTRLANFV--KEDLASYDKARDVP--ALDKTSHLSRYLRTGEISIRTVWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L K +A + +L WR+F+ +F + PI I W+ N E
Sbjct: 245 ALQKEEATEGRA----TFEKELCWRDFYNMIYV---SFPKQKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
KW QTGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKKWQEGQTGFPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P K DP+G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSEKFDPDGTFI 401
>gi|448717562|ref|ZP_21702731.1| deoxyribodipyrimidine photolyase [Halobiforma nitratireducens JCM
10879]
gi|445785862|gb|EMA36647.1| deoxyribodipyrimidine photolyase [Halobiforma nitratireducens JCM
10879]
Length = 470
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 136/314 (43%), Gaps = 47/314 (14%)
Query: 18 RIIEKNGGKTPLT---YHQFQSIVAK---MDSPSPAEAPVTPLLV----RQATTPLRDDH 67
RI+ + G TP + Y F K + P+P + P L + T PL
Sbjct: 126 RIVHEPGSITPNSGEHYSVFSYFWKKWRDREKPAPVDPPTDADLADLQEKDVTEPL---- 181
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASF-GRP-------K 119
P+LEELGFD E +A R + VASF G P +
Sbjct: 182 ------PSLEELGFD------------EPDASPRTVTQTAARDRVASFCGGPIYEYDDRR 223
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK---KAPPPLSLHGQLLWREFF 176
P S S+ LS ++G + R Y + R + + + QL +REF+
Sbjct: 224 DYPASGATSR--LSVHFKWGTIGPRAVYAATERAMDRAEADAERDGVTAFRRQLAFREFY 281
Query: 177 YCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHL 236
NP + +I W + + A W +TG+P +DA M QLREEGW+H+
Sbjct: 282 AHVLAFNPEIVSENFSDAAGEIDWRDDPDEFAAWTAGETGYPIVDAGMRQLREEGWMHNR 341
Query: 237 ARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCP 295
R VA FLT+ DL + W +G F L D D + + G W W + + Q +F + P
Sbjct: 342 VRMLVAAFLTK-DLLIDWRKGYDWFRRRLADHDTANDVGGWQWAASTGMDAQPYFRVFNP 400
Query: 296 VKFGRKADPNGDFI 309
VK GR+ DP+ +++
Sbjct: 401 VKQGREYDPDAEYV 414
>gi|425456019|ref|ZP_18835730.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9807]
gi|389802953|emb|CCI18036.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9807]
Length = 474
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 111/244 (45%), Gaps = 10/244 (4%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
E +PTLE LGF + LP T GE A RLE + + ++ + P +
Sbjct: 183 ETINLPTLENLGFTWQNPLPLT--PGEKAANSRLEEFCQ--GVINNYQEDRNFP--AVDG 236
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPN 185
+ LS L+FG + R + +L + + S+ +L WREF+ P
Sbjct: 237 TSRLSAALKFGAIGIRTIWTATLELLENCRAQEAKDSIITWQQELAWREFYQHCLYFFPE 296
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
PW N E W +TG+P +DA M QL E GW+H+ R VA FL
Sbjct: 297 LAVGAYRKEFRHFPWQDNEEHFQAWCQGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFL 356
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
T+ DL ++W++G K F + L D D + N G W W + S + + P +K DP
Sbjct: 357 TK-DLIINWQKGEKYFMQKLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQTQKFDPE 415
Query: 306 GDFI 309
G++I
Sbjct: 416 GEYI 419
>gi|209965317|ref|YP_002298232.1| deoxyribodipyrimidine photolyase family protein [Rhodospirillum
centenum SW]
gi|209958783|gb|ACI99419.1| deoxyribodipyrimidine photolyase family protein [Rhodospirillum
centenum SW]
Length = 489
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 125/282 (44%), Gaps = 19/282 (6%)
Query: 34 FQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKG 93
++++ + D P P AP L T P D + +PT D G L W+
Sbjct: 154 WRAVSSSPDWPEPLAAPDR--LEAPPTAPASDPLESWGLLPTTP----DWAGGLRQAWQP 207
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE RL LE A A + + P S S+ LSP+L FG +S R +
Sbjct: 208 GEAAVAARLRAFLEGAA--ADYAEGRDRPGSDGTSR--LSPYLHFGEISPRQVWAATRDA 263
Query: 154 YKRIKKAPPPLSLHGQ-----LLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALA 208
+ PP H + L WREF Y P NP PW + AL
Sbjct: 264 M--LSGNPPEHRRHAESFLRELGWREFCYNLLYHFPKLPERPLNPRFEDFPWQPDSAALD 321
Query: 209 KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDA 268
W +TG+P +DA M QL GW+H+ R V FL + L + W+EG + F + L+DA
Sbjct: 322 SWQRGRTGYPIVDAGMRQLWTTGWMHNRVRMIVGSFLVK-HLLLPWQEGQRWFWDTLVDA 380
Query: 269 DWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
D + NA W W++ C + +F + PV G K DP+G ++
Sbjct: 381 DLANNAAGWQWIAGCGADAAPYFRVFNPVLQGGKFDPDGRYV 422
>gi|448357813|ref|ZP_21546508.1| deoxyribodipyrimidine photolyase [Natrialba chahannaoensis JCM
10990]
gi|445648121|gb|ELZ01083.1| deoxyribodipyrimidine photolyase [Natrialba chahannaoensis JCM
10990]
Length = 466
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 128/300 (42%), Gaps = 33/300 (11%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEEL 79
I G+T Y F + SP AP L + PL P+ E L
Sbjct: 132 ITTQQGETYAVYSYFWKKWRDREKESPVPAPNGEQLASVSGDPL----------PSQEAL 181
Query: 80 GFDI-EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
GFD E +P T G A RRLE + + + P + S GLSP L++
Sbjct: 182 GFDEPEANIPDT---GMEAARRRLETFCADP--IYRYADQRDDPAADATS--GLSPHLKW 234
Query: 139 GCLSTRLFYHDLNKLYKRIKKAPPPLS---LHGQLLWREFFYCAATRNP-----NFDRML 190
G + R Y + + S QL WR F+ NP N+ R
Sbjct: 235 GTIGIRTVYEAVERAKSEAPDDATADSCEEFESQLAWRAFYAHVLATNPHTVTTNY-RSY 293
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
NPI W + AL W + TG+P +DA M QLR E ++H+ R VA FLT+ DL
Sbjct: 294 ENPIQ----WRTDAAALQAWKDGTTGYPIVDAGMRQLRAEAFMHNRLRMIVASFLTK-DL 348
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ W EG F E L D D + + G W W S + + Q +F + P+ G + DP+ ++I
Sbjct: 349 LLDWREGYAWFREKLADHDTASDVGGWQWASGTGTDAQPYFRIFNPMTQGERHDPDAEYI 408
>gi|221633352|ref|YP_002522577.1| deoxyribodipyrimidine photo-lyase [Thermomicrobium roseum DSM 5159]
gi|221156145|gb|ACM05272.1| deoxyribodipyrimidine photo-lyase [Thermomicrobium roseum DSM 5159]
Length = 467
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 93/184 (50%), Gaps = 2/184 (1%)
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
+ + LSP+ RFG LS R + + A + +LLWREF+ P
Sbjct: 222 SGSSQLSPYFRFGLLSVREAWCAAARYLDEPDAAAGARAWLDELLWREFYQHLLAAWPES 281
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
RM P + W + +ALA+W +TGFP +DA M QL EGW+ + AR VA FL+
Sbjct: 282 ARMSMQPEFRDVAWPGSNDALARWQEGRTGFPVVDAAMRQLVSEGWMSNRARMIVASFLS 341
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPN 305
+ L V W EG + F L+D D + N G W W + + + +F + PV G + DPN
Sbjct: 342 K-LLLVDWREGERFFRRELVDGDLAANVGGWQWSAGTGTDAAPYFRIFNPVLQGEQHDPN 400
Query: 306 GDFI 309
G ++
Sbjct: 401 GSWV 404
>gi|434402615|ref|YP_007145500.1| deoxyribodipyrimidine photolyase [Cylindrospermum stagnale PCC
7417]
gi|428256870|gb|AFZ22820.1| deoxyribodipyrimidine photolyase [Cylindrospermum stagnale PCC
7417]
Length = 480
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 127/293 (43%), Gaps = 16/293 (5%)
Query: 23 NGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG---VPTLEEL 79
+G KTP T + + K S P PV L + T + + G +P+ ++L
Sbjct: 141 SGAKTPYTVY---TPFWKNWSSKPKAKPVETLENAEGLTADEQEIAKLAGAIELPSAKDL 197
Query: 80 GFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFG 139
GF EG L GE A RLE + + + P SQ LS L+FG
Sbjct: 198 GFVWEGEL--VISPGEAAAQARLEAFTNNA--ITEYQEQRNFPAVDGTSQ--LSAALKFG 251
Query: 140 CLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRMLGNPICV 196
+ R + + + + S+ +L WREF+ A P
Sbjct: 252 VIGIRTVWQATIEALENSRSGETEASIRTWQQELAWREFYQHAMYHFPELAEGAYRETFK 311
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
PW+ N E W +TGFP +DA M QL E GW+H+ R VA FLT+ DL ++ +
Sbjct: 312 NFPWENNQEHFQAWCEGRTGFPIVDAAMRQLNEIGWMHNRCRMIVASFLTK-DLQINPQW 370
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G K F + L+D D S N G W W + S + + P +K DP+G++I
Sbjct: 371 GEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAQKFDPDGEYI 423
>gi|119484468|ref|ZP_01619085.1| deoxyribopyrimidine photolyase [Lyngbya sp. PCC 8106]
gi|119457942|gb|EAW39065.1| deoxyribopyrimidine photolyase [Lyngbya sp. PCC 8106]
Length = 479
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 112/242 (46%), Gaps = 14/242 (5%)
Query: 73 VPTLEELGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+P E+LGF + E +L P GE A RLE +R + + + P + SQ
Sbjct: 192 LPLAEDLGFVWENELILEP----GEEAAQNRLEEFCDRA--LFEYDEQRNFPANDGTSQ- 244
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNFD 187
LS L+FG +S R + + + + ++ +L WREF+ A P
Sbjct: 245 -LSAALKFGVISIRTVWAKTVEAMENTRSDEARNNIKAWQQELAWREFYQQAMYHFPELA 303
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
PW N E W +TG+P +DA M QL E GW+H+ R VA FLT+
Sbjct: 304 NGPYRDHFKDFPWSENQEHFQAWCEGKTGYPIVDAAMRQLNEIGWMHNRCRMIVANFLTK 363
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL ++W+ G K F + L+D D S N G W W + S + + P +K DP G+
Sbjct: 364 -DLMINWQWGEKYFMQKLMDGDLSANNGGWQWSASSGMDPKPLRIFNPTTQAQKYDPEGE 422
Query: 308 FI 309
+I
Sbjct: 423 YI 424
>gi|425443748|ref|ZP_18823817.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9443]
gi|389735029|emb|CCI01399.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9443]
Length = 474
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 110/244 (45%), Gaps = 10/244 (4%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
E +PTLE LGF + LP T GE A RLE + + ++ + P
Sbjct: 183 ETINLPTLENLGFTWQNPLPLT--PGEKAASSRLEEFCQ--GVINNYQEDRNFP--AFDG 236
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPN 185
+ LS L+FG + R + +L + + S+ +L WREF+ P
Sbjct: 237 TSRLSAALKFGAIGIRTIWTATLELLENCRAQEAKDSIITWQQELAWREFYQHCLYFFPE 296
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
PW N E W +TG+P +DA M QL E GW+H+ R VA FL
Sbjct: 297 LAVGAYRKEFRHFPWQDNEEHFQAWCQGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFL 356
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
T+ DL ++W++G K F + L D D + N G W W + S + + P +K DP
Sbjct: 357 TK-DLIINWQKGEKYFMQKLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQTQKFDPE 415
Query: 306 GDFI 309
G++I
Sbjct: 416 GEYI 419
>gi|330817717|ref|YP_004361422.1| Deoxyribodipyrimidine photolyase [Burkholderia gladioli BSR3]
gi|327370110|gb|AEA61466.1| Deoxyribodipyrimidine photolyase [Burkholderia gladioli BSR3]
Length = 487
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 116/253 (45%), Gaps = 36/253 (14%)
Query: 79 LGFDIEGLLP--PTWKGG--------ETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
L D GLLP P W GG E A+ LER L++K + +G + P S
Sbjct: 189 LKIDALGLLPTRPDWAGGLREAWVPTEEAALELLERFLDKK--IRGYGEARDRPDRPATS 246
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKR--IKKAPPPLSLHGQLLWREF-------FYCA 179
+ LSP+LRFG LS R +H + A +L WREF F
Sbjct: 247 R--LSPYLRFGQLSARQVWHAAMAAAREGGAAVAADIEKFVSELGWREFDTSLLYHFPEL 304
Query: 180 ATRN--PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLA 237
TRN FD M PW + W +TG+P +DA M +L GW+H+
Sbjct: 305 PTRNYRERFDAM---------PWRDDEAGFTAWCRGRTGYPLVDAGMRELWTTGWMHNRV 355
Query: 238 RHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPV 296
R VA FL + L + W G + F + L+DAD + N+ W W++ C + +F + PV
Sbjct: 356 RMVVASFLIK-HLLIDWRAGERWFWDTLVDADIANNSANWQWVAGCGADAAPYFRIFNPV 414
Query: 297 KFGRKADPNGDFI 309
GRK DP GD++
Sbjct: 415 TQGRKFDPEGDYV 427
>gi|409989683|ref|ZP_11273203.1| deoxyribodipyrimidine photo-lyase [Arthrospira platensis str.
Paraca]
gi|409939453|gb|EKN80597.1| deoxyribodipyrimidine photo-lyase [Arthrospira platensis str.
Paraca]
Length = 474
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 110/243 (45%), Gaps = 14/243 (5%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQ 129
+PT ++LGF P + GET A RLE +R + GR P + S+L
Sbjct: 188 ALPTAKDLGFIWSE--PFILEPGETAASDRLEIFCDRAIYEYDEGRNFPAIDGTSVL--- 242
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNF 186
SP LRFG + R + ++ + + +L WREF+ A P
Sbjct: 243 ---SPALRFGAIGIRTLWQKTQEIMALTRSDEARHHIQTWQQELAWREFYQQALYHFPAL 299
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
+ PW N E W +TG+P +DA M QL E GW+H+ R VA FLT
Sbjct: 300 ATGAFRQPFDRFPWSDNQEHFQAWCQGRTGYPIVDAAMRQLNETGWMHNRCRMIVASFLT 359
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
+ DL ++W+ G K F + L+D D + N G W W S S + + P +K DP
Sbjct: 360 K-DLIINWQWGEKYFMQTLIDGDLASNNGGWQWSSSSGMDPKPLRIFNPASQTQKYDPEA 418
Query: 307 DFI 309
++I
Sbjct: 419 EYI 421
>gi|257059330|ref|YP_003137218.1| deoxyribodipyrimidine photo-lyase [Cyanothece sp. PCC 8802]
gi|256589496|gb|ACV00383.1| Deoxyribodipyrimidine photo-lyase [Cyanothece sp. PCC 8802]
Length = 481
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 14/242 (5%)
Query: 73 VPTLEELGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+PT++ELG+ D +L P GET A RL+ + A + + + P SQ
Sbjct: 190 LPTVKELGYRWDYPLILSP----GETAAAERLDYFCD--AAINEYQEQRNFPAIEGTSQ- 242
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFD 187
LSP L+FG + R + K + + S+ +L WREF+ P
Sbjct: 243 -LSPALKFGVIGIRTVWQATLKAMENSRSDEVRESIVTWQKELAWREFYQHCLYFFPELA 301
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
PWD N W + +TG+P +DA M QL E GW+H+ R VA FLT+
Sbjct: 302 EGPYREDFQDFPWDNNEVLFQAWCDGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFLTK 361
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL ++W+ G K F + L+D D + N G W W + S + + P +K DP+ D
Sbjct: 362 -DLMINWQWGEKYFMQTLIDGDLAANNGGWQWSASSGMDPKPLRIFNPASQAQKFDPDAD 420
Query: 308 FI 309
+I
Sbjct: 421 YI 422
>gi|62910844|gb|AAY21157.1| deoxyribopyrimidine photolyase [Prochloron didemni]
Length = 475
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 112/242 (46%), Gaps = 14/242 (5%)
Query: 73 VPTLEELGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+PT ++LG+ D E +L P GET A +LE ER +A + + P + +
Sbjct: 190 LPTGKDLGYYWDGELILTP----GETAAREQLEEFSERA--IAQYQEQRNFP--AVEGTS 241
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFD 187
LSP LRFG + R + + K ++ +L WREF+ A P
Sbjct: 242 LLSPALRFGVIGIRTVWQATLEATKNSYSEEVRANIETWQKELAWREFYQHALYHFPQLT 301
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
PWD N E W +TG+P +DA M QL E GW+H+ R VA FLT+
Sbjct: 302 VEPYRQQFKDFPWDNNPEHFQAWCEGKTGYPMVDAAMRQLNETGWMHNRCRMIVASFLTK 361
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL ++W+ G + F + L D D + N G W W + + + P +K DP G+
Sbjct: 362 -DLIINWQWGEQYFMQKLCDGDLASNNGGWQWSASCGMDPKPLRIFNPASQAKKFDPEGE 420
Query: 308 FI 309
+I
Sbjct: 421 YI 422
>gi|422412010|ref|ZP_16488969.1| deoxyribodipyrimidine photo-lyase, partial [Listeria innocua FSL
S4-378]
gi|313620250|gb|EFR91701.1| deoxyribodipyrimidine photo-lyase [Listeria innocua FSL S4-378]
Length = 302
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 107/225 (47%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P + GE A RL + K +A + + + P L + LS +LR G +S R +
Sbjct: 24 PAFDSGEKAANTRLANFV--KEDLADYDKARDVP--ALDKTSHLSRYLRTGEISIRTVWQ 79
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L K +A + +L WR+F+ +F + PI I W+ N E
Sbjct: 80 ALQKEEATEGRA----TFEKELCWRDFYNMIYV---SFPKQKNEPIQENYRFIEWENNRE 132
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
KW + QTGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 133 FFKKWQDGQTGFPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRFGEKYFQQML 191
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P K DP+G FI
Sbjct: 192 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSEKFDPDGTFI 236
>gi|309791051|ref|ZP_07685587.1| Deoxyribodipyrimidine photo-lyase [Oscillochloris trichoides DG-6]
gi|308226906|gb|EFO80598.1| Deoxyribodipyrimidine photo-lyase [Oscillochloris trichoides DG6]
Length = 459
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
LSP+LRFG ++ R + P + +L WR+F+ +P+ R
Sbjct: 230 LSPYLRFGMIAVRQCL-----AVAQAHPGPGADTWIAELAWRDFYIQVLFHHPHVLRGAF 284
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
P + W+ + + A W TG+P +DA M QL++EGW+H+ AR VA FLT+ DL
Sbjct: 285 KPQYDDLAWENDPDLFAAWCAGHTGYPMVDAAMRQLQQEGWMHNRARMIVASFLTK-DLL 343
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ W G + F ++LLD D + N G W W S + Q +F + P G+K DP+GD+I
Sbjct: 344 IDWRWGERYFMQMLLDGDPAANNGGWQWAASTGTDAQPYFRIFNPTCQGQKFDPHGDYI 402
>gi|17230217|ref|NP_486765.1| deoxyribopyrimidine photolyase [Nostoc sp. PCC 7120]
gi|17131818|dbj|BAB74424.1| deoxyribopyrimidine photolyase [Nostoc sp. PCC 7120]
Length = 479
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 20/296 (6%)
Query: 22 KNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGV---PTLEE 78
++G TP T + + K S P PV L + T + +K GV PT ++
Sbjct: 140 RSGSNTPYTVY---TPFWKNWSSKPKAKPVETLQNAEGLTESEQELAQKAGVKTLPTAKD 196
Query: 79 LGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
LGF D + ++ P GE A +LE + + + + P SQ LS L
Sbjct: 197 LGFFWDADLIIAP----GEAAAQAKLEEFTAKA--ITEYQEQRNFPAVDGTSQ--LSAAL 248
Query: 137 RFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRMLGNP 193
+FG + R + + + + ++ +L WREF+ A P
Sbjct: 249 KFGVIGIRTVWQATLEALENSRSEEASAAIRTWQQELAWREFYQHAMYNFPELADGAYRE 308
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
PW+ N E W +TG+P +DA M Q+ E GW+H+ R VA FLT+ DL ++
Sbjct: 309 TFKNFPWETNEEHFQAWREGKTGYPIVDAAMRQMNESGWMHNRCRMIVASFLTK-DLLIN 367
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ G K F + L+D D S N G W W + S + + P +K DP+ ++I
Sbjct: 368 PQLGEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPLRIFNPASQSQKFDPDAEYI 423
>gi|334703517|ref|ZP_08519383.1| deoxyribodipyrimidine photolyase [Aeromonas caviae Ae398]
Length = 474
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GE EA RRL L++ V +G + P LA + LSP+L G +S R L
Sbjct: 203 WPVGEAEASRRLHAFLDQA--VLDYGETRDFPA--LAGTSVLSPYLAAGIISARQCVGAL 258
Query: 151 NKL--YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNMEAL 207
+ Y+ KA P +L+WREF+ P+ P +PW + +A
Sbjct: 259 QQRLGYRPQSKAQPGFVWLNELIWREFYRHLLVLIPSLSMNRPFKPETAALPWSWDPDAF 318
Query: 208 AKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLD 267
A W +TG+P +DA M L GW+H+ R VA FLT+ DL + W G F L+D
Sbjct: 319 AAWCEGRTGYPVVDAAMRCLNATGWMHNRLRMIVASFLTK-DLHIHWRLGEDYFMSRLID 377
Query: 268 ADWSVNAGMWMWLSCSSF-FQQFFHCYCPVKFGRKADPNGDFI 309
D + N G W W + + +F + P G++ DP G+FI
Sbjct: 378 GDLAANNGGWQWAAGTGADAAPYFRVFNPTTQGQRFDPQGEFI 420
>gi|425438323|ref|ZP_18818728.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9432]
gi|440755927|ref|ZP_20935128.1| deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa TAIHU98]
gi|389676549|emb|CCH94466.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9432]
gi|440173149|gb|ELP52607.1| deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa TAIHU98]
Length = 474
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 110/244 (45%), Gaps = 10/244 (4%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
E +PTLE LGF + LP T GE A RLE + + ++ + P
Sbjct: 183 ETINLPTLENLGFTWQNPLPLT--PGEKAADSRLEEFCQ--GVINNYQEDRNFP--AFDG 236
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPN 185
+ LS L+FG + R + +L + + S+ +L WREF+ P
Sbjct: 237 TSRLSAALKFGAIGIRTIWTATLELLENCRAEEAKNSIITWQQELAWREFYQHCLYFFPE 296
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
PW N E W +TG+P +DA M QL E GW+H+ R VA FL
Sbjct: 297 LAVGAYRKEFRHFPWQDNEEHFQAWCQGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFL 356
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
T+ DL ++W++G K F + L D D + N G W W + S + + P +K DP
Sbjct: 357 TK-DLIINWQKGEKYFMQKLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQTQKFDPE 415
Query: 306 GDFI 309
G++I
Sbjct: 416 GEYI 419
>gi|119497467|ref|XP_001265492.1| deoxyribodipyrimidine photo-lyase Phr1, putative [Neosartorya
fischeri NRRL 181]
gi|119413654|gb|EAW23595.1| deoxyribodipyrimidine photo-lyase Phr1, putative [Neosartorya
fischeri NRRL 181]
Length = 584
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 13/244 (5%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
P ++L + + L + GE EA+RRLE LE K R +++++ QT
Sbjct: 290 AAPENKQLSEEEKQHLGQLYPAGEHEALRRLEAFLEEKV------RDYAEARNMVSGQTT 343
Query: 132 --LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFFYCAATRNPNF- 186
LSP+ G LS R + K + P +H G++ WREF+ P+
Sbjct: 344 SILSPYFASGLLSARTAIEHARRANKGSLQHGDPGLVHWIGEVAWREFYRHVLVHWPSIC 403
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
P + W+ + + W +TGFP +DA M Q++++ W+H+ R VA FL+
Sbjct: 404 MNKCFKPEFTNLEWEYDEDRFTTWCEGKTGFPIVDAAMRQVKQDKWMHNRTRMIVASFLS 463
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFF-QQFFHCYCPVKFGRKADPN 305
+ DL + W G + F E L+D D++ N G W + S + Q +F + P++ + DP+
Sbjct: 464 K-DLLIDWRRGERYFMETLIDGDFASNHGGWGFGSSTGVDPQPYFRIFNPLRQSERFDPD 522
Query: 306 GDFI 309
G++I
Sbjct: 523 GEYI 526
>gi|441519651|ref|ZP_21001324.1| deoxyribodipyrimidine photo-lyase [Gordonia sihwensis NBRC 108236]
gi|441460909|dbj|GAC59285.1| deoxyribodipyrimidine photo-lyase [Gordonia sihwensis NBRC 108236]
Length = 465
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 113/234 (48%), Gaps = 28/234 (11%)
Query: 87 LPPTWKGGETEAMRR-------LERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFG 139
LPP GE A+RR ER L+R + RP L + T LSP+L+FG
Sbjct: 190 LPPA---GEAAALRRWRRFRQDAERGLDR--YSDDRDRPD------LDATTRLSPYLKFG 238
Query: 140 CLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
C R HDL R + ++L +L WR+F+ R P+ R + +
Sbjct: 239 CAHPRTLLHDL-----RGRGDAGAVALRSELAWRDFYADVLHRRPDTARANYHAAFDALE 293
Query: 200 WDVNMEALAK---WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
+ +A A W +TG+P +DA M QL EGW+H+ R VA FLT+ DL + W
Sbjct: 294 YHSGPDADAAFDAWCAGRTGYPIVDAGMRQLLAEGWMHNRVRMIVASFLTK-DLHLPWWR 352
Query: 257 GMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G + F + L+D D + N W W + C + FF + PV G + DP+GD++
Sbjct: 353 GARHFMKHLVDGDLASNQHGWQWTAGCGTDAAPFFRIFNPVSQGERFDPDGDYV 406
>gi|146293808|ref|YP_001184232.1| deoxyribodipyrimidine photo-lyase [Shewanella putrefaciens CN-32]
gi|145565498|gb|ABP76433.1| Deoxyribodipyrimidine photo-lyase type I [Shewanella putrefaciens
CN-32]
Length = 493
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 19/246 (7%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+P + L + + W GE +A R L +++K V + + + P L + +
Sbjct: 193 LPEPKALNLAVNKVSSEQWGAGEGQAKRLLCDFIQQK--VQDYKQDRDFPA--LDGTSCI 248
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFF------YCAATRNP 184
SP+L G LS R L + + + L +L+WREF+ + ++N
Sbjct: 249 SPYLAIGVLSARQCVAALLQRFPEVIVDDTSLGRTWLNELVWREFYRHLLVAFPDLSKNH 308
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
NF+R Q+ W N+E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 309 NFNRQAD-----QVQWRNNIEEFKAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVVASF 363
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKAD 303
LT+ L + W G + F + L+D D + N G W W + C Q +F + P+ K D
Sbjct: 364 LTK-HLLIDWRWGERYFRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFD 422
Query: 304 PNGDFI 309
P+G FI
Sbjct: 423 PDGSFI 428
>gi|218231250|ref|YP_002367872.1| deoxyribodipyrimidine photolyase [Bacillus cereus B4264]
gi|218159207|gb|ACK59199.1| deoxyribodipyrimidine photo-lyase [Bacillus cereus B4264]
Length = 476
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MEAIWEPTEEGAYKTFKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NKLYKRIKK--APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWD 201
L YH L NK +R +S QL+WREF Y P N PW+
Sbjct: 247 LMYHYLINKSTERQCSFFEKQVISFIRQLIWREFSYYLLYHYPFTAYKPLNKNFEHFPWN 306
Query: 202 VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F
Sbjct: 307 KEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWF 365
Query: 262 DELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 366 MDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|453362943|dbj|GAC81211.1| deoxyribodipyrimidine photo-lyase [Gordonia malaquae NBRC 108250]
Length = 442
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 105/225 (46%), Gaps = 14/225 (6%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GET A+ R L +A +G + P L + LS +L+ GCL R H
Sbjct: 179 PLAPAGETAALDRWHDFLTDD--LADYGTNRDRPD--LDRTSRLSAYLKTGCLHPRTLLH 234
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN---ME 205
D+ R + +L WREF+ P+ + N ++P D E
Sbjct: 235 DM-----RSRTDDGAAKFRSELCWREFYADVLHHRPDSAYIEFNEKFRRMPHDTGSDAQE 289
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
A W +TG+P +DA M QL EGW+H+ R VA FLT+ DL + W+ G + F + L
Sbjct: 290 AFRAWCEGRTGYPIVDAGMRQLAAEGWMHNRVRMIVASFLTK-DLHLPWQWGARHFMDFL 348
Query: 266 LDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N W W++ C + +F + P G K DP GD++
Sbjct: 349 IDGDLASNQHGWQWVAGCGTDASPYFRVFNPTTQGEKFDPTGDYV 393
>gi|209525318|ref|ZP_03273859.1| Deoxyribodipyrimidine photo-lyase [Arthrospira maxima CS-328]
gi|209494169|gb|EDZ94483.1| Deoxyribodipyrimidine photo-lyase [Arthrospira maxima CS-328]
Length = 474
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 112/243 (46%), Gaps = 14/243 (5%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQ 129
+PT ++LGF P + GET A RL+ +R + GR P + SLL
Sbjct: 188 ALPTAKDLGFIWSE--PFILEPGETAASDRLQLFCDRAIYEYDQGRNFPAIDGTSLL--- 242
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLY--KRIKKAPPPLSL-HGQLLWREFFYCAATRNPNF 186
SP LRFG + R + ++ R +A + ++ WREF+ A P
Sbjct: 243 ---SPALRFGAIGIRTLWQKTQEIMALTRSDEARDHIQTWQQEIAWREFYQQALYHFPAL 299
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
+ PW N E W +TG+P +DA M QL E GW+H+ R VA FLT
Sbjct: 300 ATGAFRQPFDRFPWSDNQEHFQAWCQGRTGYPIVDAAMRQLNETGWMHNRCRMIVASFLT 359
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
+ DL ++W+ G K F + L+D D + N G W W S S + + P +K DP
Sbjct: 360 K-DLIINWQWGEKYFMQRLIDGDLASNNGGWQWSSSSGMDPKPLRIFNPASQAQKYDPEA 418
Query: 307 DFI 309
++I
Sbjct: 419 EYI 421
>gi|376004880|ref|ZP_09782483.1| deoxyribodipyrimidine photolyase, FAD-binding [Arthrospira sp. PCC
8005]
gi|375326730|emb|CCE18236.1| deoxyribodipyrimidine photolyase, FAD-binding [Arthrospira sp. PCC
8005]
Length = 474
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 112/243 (46%), Gaps = 14/243 (5%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQ 129
+PT ++LGF P + GET A RL+ +R + GR P + SLL
Sbjct: 188 ALPTAKDLGFIWSE--PFILEPGETAASDRLQLFCDRAIYEYDQGRNFPAIDGTSLL--- 242
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYK--RIKKAPPPLSL-HGQLLWREFFYCAATRNPNF 186
SP LRFG + R + ++ R +A + ++ WREF+ A P
Sbjct: 243 ---SPALRFGAIGIRTLWQKTQEIMALTRSDEARDHIQTWQQEIAWREFYQQALYHFPAL 299
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
+ PW N E W +TG+P +DA M QL E GW+H+ R VA FLT
Sbjct: 300 ATGAFRQPFDRFPWSDNQEHFQAWCQGRTGYPIVDAAMRQLNETGWMHNRCRMIVASFLT 359
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
+ DL ++W+ G K F + L+D D + N G W W S S + + P +K DP
Sbjct: 360 K-DLIINWQWGEKYFMQRLIDGDLASNNGGWQWSSSSGMDPKPLRIFNPASQAQKYDPEA 418
Query: 307 DFI 309
++I
Sbjct: 419 EYI 421
>gi|218246283|ref|YP_002371654.1| deoxyribodipyrimidine photo-lyase [Cyanothece sp. PCC 8801]
gi|218166761|gb|ACK65498.1| Deoxyribodipyrimidine photo-lyase [Cyanothece sp. PCC 8801]
Length = 481
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 112/242 (46%), Gaps = 14/242 (5%)
Query: 73 VPTLEELGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+PT++ELG+ D +L P GET A RL+ + A + + + P SQ
Sbjct: 190 LPTVQELGYRWDYPLILSP----GETAAAERLDYFCD--AAINEYQEQRNFPAIEGTSQ- 242
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFD 187
LSP L+FG + R + K + + S+ +L WREF+ P
Sbjct: 243 -LSPALKFGVIGIRTVWQATLKAMENSRSDEVRESIVTWQKELAWREFYQHCLYFFPELA 301
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
PWD N W +TG+P +DA M QL E GW+H+ R VA FLT+
Sbjct: 302 EGPYREDFQDFPWDNNEVLFQAWCEGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFLTK 361
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL ++W+ G K F + L+D D + N G W W + S + + P +K DP+ D
Sbjct: 362 -DLMINWQWGEKYFMQTLIDGDLAANNGGWQWSASSGMDPKPLRIFNPASQAQKFDPDAD 420
Query: 308 FI 309
+I
Sbjct: 421 YI 422
>gi|344924235|ref|ZP_08777696.1| deoxyribodipyrimidine photo-lyase [Candidatus Odyssella
thessalonicensis L13]
Length = 473
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 121/245 (49%), Gaps = 24/245 (9%)
Query: 81 FDIE--GLLPP----------TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
FD++ GLLP TW GE A ++L + R +A + + + P S
Sbjct: 173 FDLKKLGLLPTKPDWASGLRQTWTPGEVGAQQKLANFISR---IAGYKQNRNYPAQQATS 229
Query: 129 QTGLSPFLRFGCLSTRLFYHDLN---KLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
LSP L +G +S R +H ++ +LY +++ L+ ++ WREF Y P
Sbjct: 230 L--LSPHLAWGEISVRQLWHAIHTQIRLYPVLEQDA--LNFLSEIGWREFSYHLLYHVPT 285
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
PW + AL KW+ QTG+P IDA M +L G++H+ R VA FL
Sbjct: 286 LPTHPLRQQFANFPWQQDENALRKWSQGQTGYPIIDAGMRELWHTGYMHNRVRMIVASFL 345
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADP 304
+ DL +SW++G F + L+DAD + N+ W W++ C + +F + PV G K DP
Sbjct: 346 VK-DLLLSWQQGEAWFWDTLVDADLANNSASWQWVAGCGADAAPYFRVFNPVLQGEKFDP 404
Query: 305 NGDFI 309
G+++
Sbjct: 405 EGEYV 409
>gi|16799672|ref|NP_469940.1| hypothetical protein lin0597 [Listeria innocua Clip11262]
gi|16413037|emb|CAC95829.1| lin0597 [Listeria innocua Clip11262]
Length = 467
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 107/225 (47%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P + GE A RL + K +A + + + P L + LS +LR G +S R +
Sbjct: 189 PAFDSGEKAANTRLANFV--KEDLADYDKARDVP--ALDKTSHLSRYLRTGEISIRTVWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L K +A + +L WR+F+ +F + PI I W+ N E
Sbjct: 245 ALQKEEATEGRA----TFEKELCWRDFYNMIYV---SFPKQKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
KW + QTGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKKWQDGQTGFPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P K DP+G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSEKFDPDGTFI 401
>gi|229191248|ref|ZP_04318236.1| Deoxyribodipyrimidine photolyase [Bacillus cereus ATCC 10876]
gi|228592263|gb|EEK50094.1| Deoxyribodipyrimidine photolyase [Bacillus cereus ATCC 10876]
Length = 476
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MEAIWEPTEEGAYKTFKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NKLYKRIKK--APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWD 201
L YH L NK +R +S QL+WREF Y P N PW+
Sbjct: 247 LMYHYLINKSTERQCSFFEKQVISFIRQLIWREFSYYLLYHYPFTVYKPLNKNFEHFPWN 306
Query: 202 VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F
Sbjct: 307 KEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWF 365
Query: 262 DELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 366 MDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|423065610|ref|ZP_17054400.1| deoxyribodipyrimidine photo-lyase [Arthrospira platensis C1]
gi|406713053|gb|EKD08228.1| deoxyribodipyrimidine photo-lyase [Arthrospira platensis C1]
Length = 474
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 112/243 (46%), Gaps = 14/243 (5%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQ 129
+PT ++LGF P + GET A RL+ +R + GR P + SLL
Sbjct: 188 ALPTAKDLGFIWSE--PFILEPGETAASDRLQLFCDRAIYEYDEGRNFPAIDGTSLL--- 242
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLY--KRIKKAPPPLSL-HGQLLWREFFYCAATRNPNF 186
SP LRFG + R + ++ R +A + ++ WREF+ A P
Sbjct: 243 ---SPALRFGAIGIRTLWQKTQEIMALTRSDEARDHIQTWQQEIAWREFYQQALYHFPAL 299
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
+ PW N E W +TG+P +DA M QL E GW+H+ R VA FLT
Sbjct: 300 ATGAFRQPFDRFPWSDNQEHFQAWCQGRTGYPIVDAAMRQLNETGWMHNRCRMIVASFLT 359
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
+ DL ++W+ G K F + L+D D + N G W W S S + + P +K DP
Sbjct: 360 K-DLIINWQWGEKYFMQRLIDGDLASNNGGWQWSSSSGMDPKPLRIFNPASQAQKYDPEA 418
Query: 307 DFI 309
++I
Sbjct: 419 EYI 421
>gi|386314555|ref|YP_006010720.1| deoxyribodipyrimidine photo-lyase [Shewanella putrefaciens 200]
gi|319427180|gb|ADV55254.1| Deoxyribodipyrimidine photo-lyase [Shewanella putrefaciens 200]
Length = 493
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 19/246 (7%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+P + L + + W GE +A R L +++K V + + + P L + +
Sbjct: 193 LPEPKALNLAVNKVSSEQWGAGEGQAKRLLCDFVQQK--VQDYKQDRDFPA--LDGTSCI 248
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFF------YCAATRNP 184
SP+L G LS R L + + + L +L+WREF+ + ++N
Sbjct: 249 SPYLAIGVLSARQCVAALLQRFPEVIVDDTSLGRTWLNELVWREFYRHLLVAFPDLSKNH 308
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
NF+R Q+ W N+E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 309 NFNRQAD-----QVQWRNNIEEFKAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVVASF 363
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKAD 303
LT+ L + W G + F + L+D D + N G W W + C Q +F + P+ K D
Sbjct: 364 LTK-HLLIDWRWGERYFRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFD 422
Query: 304 PNGDFI 309
P+G FI
Sbjct: 423 PDGSFI 428
>gi|423099697|ref|ZP_17087404.1| putative deoxyribodipyrimidine photo-lyase [Listeria innocua ATCC
33091]
gi|370793782|gb|EHN61607.1| putative deoxyribodipyrimidine photo-lyase [Listeria innocua ATCC
33091]
Length = 467
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 107/225 (47%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P + GE A RL + K +A + + + P L + LS +LR G +S R +
Sbjct: 189 PAFDSGEKAANTRLANFV--KEDLADYDKARDVP--ALDKTSHLSRYLRTGEISIRTVWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L K +A + +L WR+F+ +F + PI I W+ N E
Sbjct: 245 ALQKEEATEGRA----TFEKELCWRDFYNMIYV---SFPKQKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
KW + QTGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKKWQDGQTGFPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P K DP+G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSEKFDPDGTFI 401
>gi|120598121|ref|YP_962695.1| deoxyribodipyrimidine photo-lyase [Shewanella sp. W3-18-1]
gi|120558214|gb|ABM24141.1| Deoxyribodipyrimidine photo-lyase type I [Shewanella sp. W3-18-1]
Length = 493
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 19/246 (7%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+P + L + + W GE +A R L +++K V + + + P L + +
Sbjct: 193 LPEPKALNLAVNKVSSEQWGAGEGQAKRLLCDFVQQK--VQDYKQDRDFPA--LDGTSCI 248
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFF------YCAATRNP 184
SP+L G LS R L + + + L +L+WREF+ + ++N
Sbjct: 249 SPYLAIGVLSARQCVAALLQRFPEVIVDDTSLGRTWLNELVWREFYRHLLVAFPDLSKNY 308
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
NF+R Q+ W N+E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 309 NFNRQAD-----QVQWRNNIEEFKAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVVASF 363
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKAD 303
LT+ L + W G + F + L+D D + N G W W + C Q +F + P+ K D
Sbjct: 364 LTK-HLLIDWRWGERYFRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFD 422
Query: 304 PNGDFI 309
P+G FI
Sbjct: 423 PDGSFI 428
>gi|443310722|ref|ZP_21040364.1| deoxyribodipyrimidine photolyase [Synechocystis sp. PCC 7509]
gi|442779247|gb|ELR89498.1| deoxyribodipyrimidine photolyase [Synechocystis sp. PCC 7509]
Length = 476
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 138/313 (44%), Gaps = 22/313 (7%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQ--FQSIVAKMDSPSPAEAPVTPLLVRQATTP 62
IEK L S I + G TP T + +++ ++K P PV L T
Sbjct: 125 IEKNWDQLLHSPEDI--RTGSNTPYTVYSPFWRNWLSK-----PKAEPVAALKDLTGLTA 177
Query: 63 LRDDHDEKYGV---PTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPK 119
+ K GV PT ++LGF+ E L GET A ++LE + + +
Sbjct: 178 AEKNLAIKAGVIALPTAKDLGFNWENEL--VIAPGETAATQKLEEFTYLA--INEYKEQR 233
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFF 176
P SQ LS L+FG + R + + + + S+ G +L WREF+
Sbjct: 234 NFPAVNGTSQ--LSAALKFGVIGIRTVWAATKEALENSRSDETNTSIVGWQQELAWREFY 291
Query: 177 YCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHL 236
A P + + P+D N + W +TG+P +DA M Q+ E GW+H+
Sbjct: 292 QHAMYNFPELETGAYREVFKNFPYDNNEKYFQAWCEGKTGYPIVDAAMRQMNELGWMHNR 351
Query: 237 ARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPV 296
R VA FLT+ DL ++ + G K F + L+D D S N G W W + S + + P
Sbjct: 352 CRMIVASFLTK-DLIINPQLGEKYFYQHLIDGDLSANNGGWQWSASSGMDPKPIRIFNPA 410
Query: 297 KFGRKADPNGDFI 309
+K DP GD+I
Sbjct: 411 SQAQKFDPEGDYI 423
>gi|398817002|ref|ZP_10575637.1| deoxyribodipyrimidine photolyase [Brevibacillus sp. BC25]
gi|398031514|gb|EJL24900.1| deoxyribodipyrimidine photolyase [Brevibacillus sp. BC25]
Length = 484
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 108/219 (49%), Gaps = 8/219 (3%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE A +RL++ L + ++ + P + + + LS L G LS R YH + ++
Sbjct: 205 GERAAQKRLQQFLNGD--IYTYKEKRDMPG--VNATSRLSFALNTGTLSIRTVYHSVQEV 260
Query: 154 YKRIK--KAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWA 211
R + + + +L+WREF+ +P+ P + W+ + +W
Sbjct: 261 LARARGEQVTSIEAFLTELIWREFYQQVLYFHPHTTDHAYLPQFETVAWENRKDLFTRWC 320
Query: 212 NAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWS 271
+ +TG+P +DA M QL E GW+H+ R A FLT+ DL V W GM F + L+D D +
Sbjct: 321 HGETGYPIVDAAMKQLNETGWMHNRLRMITASFLTK-DLLVDWRWGMAYFAQQLVDFDEA 379
Query: 272 VNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
N G W W S + Q +F + PV G K DP+G F+
Sbjct: 380 ANIGGWQWSASTGTDAQPYFRIFNPVTQGEKFDPDGAFV 418
>gi|229179435|ref|ZP_04306788.1| Deoxyribodipyrimidine photolyase [Bacillus cereus 172560W]
gi|228603936|gb|EEK61404.1| Deoxyribodipyrimidine photolyase [Bacillus cereus 172560W]
Length = 476
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MEAIWEPTEEGAYKTFKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NKLYKRIKK--APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWD 201
L YH L NK +R +S QL+WREF Y P N PW+
Sbjct: 247 LMYHYLINKSTERQCSFFEKQVISFIRQLIWREFSYYLLYHYPFTVYKPLNKNFEHFPWN 306
Query: 202 VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F
Sbjct: 307 KEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWF 365
Query: 262 DELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 366 MDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|326384210|ref|ZP_08205892.1| deoxyribodipyrimidine photo-lyase [Gordonia neofelifaecis NRRL
B-59395]
gi|326197075|gb|EGD54267.1| deoxyribodipyrimidine photo-lyase [Gordonia neofelifaecis NRRL
B-59395]
Length = 480
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 10/188 (5%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
L + + LSP+L+FGCL R HDL R + +L +L WR+F+ P
Sbjct: 237 LDATSRLSPYLKFGCLHPRTILHDL-----RARTDDGATTLRSELAWRDFYADVLFHRPE 291
Query: 186 FDRMLGNPICVQIPWDVNMEALAK---WANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
R + Q+ +D +A A W +TG+P +DA M QL EGW+H+ R VA
Sbjct: 292 TARTGVDAKFDQMEYDSGPDADAAFDAWCRGRTGYPIVDAGMRQLLAEGWMHNRVRMIVA 351
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRK 301
FLT+ DL + W G + F L+D D + N W W + C + +F + PV G +
Sbjct: 352 SFLTK-DLHLPWWRGARYFMTHLVDGDLASNQHGWQWTAGCGTDAAPYFRVFNPVSQGER 410
Query: 302 ADPNGDFI 309
DP+GD++
Sbjct: 411 FDPSGDYV 418
>gi|423436667|ref|ZP_17413648.1| hypothetical protein IE9_02848 [Bacillus cereus BAG4X12-1]
gi|401122403|gb|EJQ30190.1| hypothetical protein IE9_02848 [Bacillus cereus BAG4X12-1]
Length = 476
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 113/227 (49%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W+ E A + ++ K S GR P S+LA P+L FG +S +L +H
Sbjct: 197 WEPTEEGAYKTFKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVKLMFH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PWD
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVSKPLNKSFENFPWDKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L+ W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F +
Sbjct: 309 EELLSVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|365087758|ref|ZP_09327644.1| deoxyribodipyrimidine photo-lyase [Acidovorax sp. NO-1]
gi|363417381|gb|EHL24461.1| deoxyribodipyrimidine photo-lyase [Acidovorax sp. NO-1]
Length = 496
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 117/248 (47%), Gaps = 26/248 (10%)
Query: 73 VPTLEELGFDIEGL----LPPTWKGGET---EAMRRLERHLERKAWVASFGRPKMTPQSL 125
VPTL++LGF+ L LP +G + + + R+ER+ + + + A G
Sbjct: 201 VPTLQDLGFEPTALSQLRLPTGARGAQQLFDDFLGRVERYEDTRNFPAVKG--------- 251
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LS LRFG +S RL ++L + + P + +L+WR+F++ +P+
Sbjct: 252 ---PSYLSVHLRFGTISPRLLARTAHRLMQ--EGNPGATTWLSELIWRDFYFQILHHHPH 306
Query: 186 FDRMLGNPICVQIPWDVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
P I W+ EA A W +TG+P +DA M Q+ + G++H+ R VA
Sbjct: 307 VVGQSFKPAYDAIAWETGPEADALFAAWCEGRTGYPLVDAAMAQINQTGYMHNRLRMVVA 366
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRK 301
FL + DL + W G F L D D + N G W W S S Q +F + PV K
Sbjct: 367 SFLVK-DLGIDWRRGEAYFATHLNDFDLAANNGGWQWASSSGCDAQPYFRIFNPVSQSEK 425
Query: 302 ADPNGDFI 309
DP G FI
Sbjct: 426 FDPEGKFI 433
>gi|300864867|ref|ZP_07109715.1| deoxyribopyrimidine photolyase [Oscillatoria sp. PCC 6506]
gi|300337160|emb|CBN54865.1| deoxyribopyrimidine photolyase [Oscillatoria sp. PCC 6506]
Length = 482
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 10/240 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+P+ +ELGF P + GE A +L+ +R + + + + P L + L
Sbjct: 195 LPSAKELGFVWNA--PLIIEPGEDGAQEKLDDFCDRA--IYDYDKQRNFP--ALDGTSQL 248
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNFDRM 189
S L+FG + R + + ++ +++ +L WREF+ A P
Sbjct: 249 SAALKFGAIGIRTVWQATVTVMEKCHTEAARINIQTWQQELAWREFYQHAMYNFPELANG 308
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
PWD N E W +TG+P IDA M Q+ + GW+H+ R VA FLT+ D
Sbjct: 309 AYREAFKDFPWDNNQELFQAWCEGKTGYPIIDAAMRQMNQTGWMHNRCRMIVASFLTK-D 367
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L ++W+ G K F + L+D D S N G W W + S + + P G+K DP ++I
Sbjct: 368 LIINWQWGEKYFMQNLIDGDLSANNGGWQWSASSGMDPKPLRIFNPFTQGQKFDPKSEYI 427
>gi|217972489|ref|YP_002357240.1| deoxyribodipyrimidine photo-lyase [Shewanella baltica OS223]
gi|217497624|gb|ACK45817.1| Deoxyribodipyrimidine photo-lyase [Shewanella baltica OS223]
Length = 499
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 23/230 (10%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTR----LF 146
W GE +A R L +++K V + + + P + + +SP+L G +S R
Sbjct: 218 WAAGEGQAKRILSAFIQQK--VQDYKQDRDFPS--IDGTSSISPYLAIGVVSPRQCVAAL 273
Query: 147 YHDLNKLYKRIKKAPPPLSLHGQLLWREFF------YCAATRNPNFDRMLGNPICVQIPW 200
HD ++ + P + +L WREF+ + ++N NF+R + + W
Sbjct: 274 LHDFPEVI--VDDTSPARTWLNELTWREFYRHLLVAFPDLSKNHNFNRQADH-----VQW 326
Query: 201 DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKI 260
N + A W +TG+P +DA M QL + GW+H+ R VA FLT+ L + W G +
Sbjct: 327 RNNPQEFAAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERY 385
Query: 261 FDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F + L+D D + N G W W + C Q +F + P+ K DP+G FI
Sbjct: 386 FRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFDPDGSFI 435
>gi|113474888|ref|YP_720949.1| deoxyribodipyrimidine photo-lyase type I [Trichodesmium erythraeum
IMS101]
gi|110165936|gb|ABG50476.1| Deoxyribodipyrimidine photo-lyase type I [Trichodesmium erythraeum
IMS101]
Length = 474
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 19/266 (7%)
Query: 52 TPLLVRQATTPLRDDHDEKYGV---PTLEELGF--DIEGLLPPTWKGGETEAMRRLERHL 106
TP+L + T + + +K GV PT ++LGF D + +L P GET A+ +LE+
Sbjct: 167 TPVL--KGLTEDQLQYTKKIGVIDLPTAKQLGFNWDNKLILEP----GETAALEKLEKF- 219
Query: 107 ERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL 166
++S+ + P L + LS L+FG + R + +L + + ++
Sbjct: 220 -SNGAISSYQEQRNFPS--LDGTSQLSVALKFGTIGIRTVWAKTQELIENCYSSEVFENI 276
Query: 167 ---HGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAI 223
++ WREF+ P + PW N W TG+P +DA
Sbjct: 277 ETWQKEIAWREFYQYVMYHYPELETGPYREHWKNFPWKNNKAHFQAWCEGNTGYPIVDAA 336
Query: 224 MTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS 283
M QL E GW+H+ R VA FLT+ DL ++W+ G K F + L+D D N G W W + S
Sbjct: 337 MRQLNETGWMHNRCRMIVASFLTK-DLIINWQWGEKYFMQNLIDGDLCANNGGWQWSASS 395
Query: 284 SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ + PV +K DP G++I
Sbjct: 396 GMDPKPLRIFNPVSQTQKYDPEGEYI 421
>gi|144897443|emb|CAM74307.1| Deoxyribodipyrimidine photo-lyase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 457
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 108/223 (48%), Gaps = 16/223 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W+ GE A RL L+ V ++ R + P + LSP L FG +S R +H
Sbjct: 189 WQPGEAGAAARLADFLDGP--VETYQRDRDLPAK--PGTSLLSPHLAFGEISPRQIWHAA 244
Query: 151 NKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEAL 207
L PP +H +L WREF R P+ + P PW + EAL
Sbjct: 245 RAL-------PPGDGIHTFLKELGWREFSRHLLARQPDLATIPLRPEFRAFPWRDDPEAL 297
Query: 208 AKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLD 267
KW +TG+P IDA + QL + GW+H+ R VA FL + DL + W+ G F + L+D
Sbjct: 298 RKWQMGRTGYPIIDAGLRQLWQTGWMHNRVRMIVASFLIK-DLLIPWQAGEAWFWDTLVD 356
Query: 268 ADWSVNAGMWMWLSCSSF-FQQFFHCYCPVKFGRKADPNGDFI 309
AD + NA W W++ S FF + PV G K DP+G ++
Sbjct: 357 ADSANNAASWQWVAGSGADAAPFFRIFNPVTQGEKFDPDGTYV 399
>gi|160876317|ref|YP_001555633.1| deoxyribodipyrimidine photo-lyase [Shewanella baltica OS195]
gi|378709517|ref|YP_005274411.1| deoxyribodipyrimidine photo-lyase [Shewanella baltica OS678]
gi|418024064|ref|ZP_12663048.1| Deoxyribodipyrimidine photo-lyase [Shewanella baltica OS625]
gi|160861839|gb|ABX50373.1| Deoxyribodipyrimidine photo-lyase [Shewanella baltica OS195]
gi|315268506|gb|ADT95359.1| Deoxyribodipyrimidine photo-lyase [Shewanella baltica OS678]
gi|353536937|gb|EHC06495.1| Deoxyribodipyrimidine photo-lyase [Shewanella baltica OS625]
Length = 499
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 23/230 (10%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTR----LF 146
W GE +A R L +++K V + + + P + + +SP+L G +S R
Sbjct: 218 WAAGEGQAKRILSAFIQQK--VQDYKQDRDFPA--IDGTSSISPYLAIGVVSPRQCVAAL 273
Query: 147 YHDLNKLYKRIKKAPPPLSLHGQLLWREFF------YCAATRNPNFDRMLGNPICVQIPW 200
HD ++ + P + +L WREF+ + ++N NF+R + + W
Sbjct: 274 LHDFPEVI--VDDTSPARTWLNELTWREFYRHLLVAFPDLSKNYNFNRQADH-----VQW 326
Query: 201 DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKI 260
N + A W +TG+P +DA M QL + GW+H+ R VA FLT+ L + W G +
Sbjct: 327 RNNQQEFAAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERN 385
Query: 261 FDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F + L+D D + N G W W + C Q +F + P+ K DP+G FI
Sbjct: 386 FRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFDPDGSFI 435
>gi|407940619|ref|YP_006856260.1| deoxyribodipyrimidine photo-lyase [Acidovorax sp. KKS102]
gi|407898413|gb|AFU47622.1| deoxyribodipyrimidine photo-lyase [Acidovorax sp. KKS102]
Length = 496
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 116/248 (46%), Gaps = 26/248 (10%)
Query: 73 VPTLEELGF---DIEGLLPPTWKGGETEA----MRRLERHLERKAWVASFGRPKMTPQSL 125
VPTL++LGF D+ L PT G + + R+ER+ + + + A G
Sbjct: 201 VPTLQDLGFEPTDLSQLRLPTGARGAQQLFDDFLGRIERYEDTRNFPAVKG--------- 251
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LS LRFG +S RL ++L ++ P + +L+WR+F++ +P+
Sbjct: 252 ---PSYLSVHLRFGTISPRLLARTAHRLM--LEGNPGATTWLSELIWRDFYFQILHHHPH 306
Query: 186 FDRMLGNPICVQIPWDVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
P I W+ EA A W +TG+P +DA M Q+ + G++H+ R VA
Sbjct: 307 VVGQSFKPAYDAIAWETGPEADALFAAWCEGRTGYPLVDAAMAQINQTGYMHNRLRMVVA 366
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRK 301
FL + DL + W G F L D D + N G W W S S Q +F + PV K
Sbjct: 367 SFLVK-DLGIDWRRGEAYFATHLNDFDLAANNGGWQWASSSGCDAQPYFRIFNPVSQSEK 425
Query: 302 ADPNGDFI 309
DP G FI
Sbjct: 426 FDPEGKFI 433
>gi|56807956|ref|ZP_00365772.1| COG0415: Deoxyribodipyrimidine photolyase [Streptococcus pyogenes
M49 591]
Length = 381
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
EA ++L R ++ + +A++ + P L S+ LSPFLR G + R YH
Sbjct: 129 EASKQLNRFIQDQ--LAAYHANRDFPAQLGTSR--LSPFLRIGAIGIRTVYH-------A 177
Query: 157 IKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
+++AP L + +L WR+F+ P+ QI W N + W
Sbjct: 178 VRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPDWFQLWKEG 237
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
+TG+P +DA M QL++ GW+H+ R VA FLT+ DL W G + F + L+D D + N
Sbjct: 238 KTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK-DLLCDWRLGEQYFQQQLIDYDAASN 296
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + PV G++ DP G+FI
Sbjct: 297 IGGWQWAASTGTDAVPYFRIFNPVTQGKRFDPKGEFI 333
>gi|114564201|ref|YP_751715.1| deoxyribodipyrimidine photo-lyase [Shewanella frigidimarina NCIMB
400]
gi|114335494|gb|ABI72876.1| Deoxyribodipyrimidine photo-lyase type I [Shewanella frigidimarina
NCIMB 400]
Length = 477
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 23/248 (9%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+ T E+ F+ + W GE A R L++ L + VA + + P L + L
Sbjct: 183 LATPNEVVFNCYKMSSEQWPAGEGAAKRILDQFLANQ--VADYQAERDFPA--LEGTSRL 238
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKR--IKKAPPPLSLHGQLLWREFF------YCAATRNP 184
SPFL G +S+R + Y + ++ P + +L+WREF+ + + N
Sbjct: 239 SPFLAIGVISSRQCVAAILARYPQALVEDTCPAKTWLNELIWREFYRHLLVAFPRLSMNH 298
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
NF+ LG+ I W N+ W + QTG+P IDA M QL + GW+H+ R VA F
Sbjct: 299 NFNE-LGDGIV----WRNNLAEFTAWCDGQTGYPIIDAAMRQLNQTGWMHNRLRMVVASF 353
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS---CSSFFQQFFHCYCPVKFGRK 301
LT+ L V W G + F + L+D D + N G W W + C + Q +F + P+ K
Sbjct: 354 LTK-HLLVDWRWGERYFRQKLIDGDLAANNGGWQWSAGTGCDA--QPYFRVFNPMTQSSK 410
Query: 302 ADPNGDFI 309
DP+ FI
Sbjct: 411 FDPDASFI 418
>gi|228921829|ref|ZP_04085144.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228837834|gb|EEM83160.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 476
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W E A + ++ K S GR P S+LA P+L FG + +
Sbjct: 193 MEAIWDPTEEGAYKVFKKFFSSKLAFYSEGRDFPNQNAHSMLA------PYLSFGQIPVK 246
Query: 145 LFYHDL-NKLYKRIKK--APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWD 201
L YH L NK +R +S QL+WREF Y P N PW+
Sbjct: 247 LMYHYLINKSTERQCSLFEKQVISFIRQLIWREFSYYLLYHYPFTVYKPLNKNFEHFPWN 306
Query: 202 VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L +SW+EG K F
Sbjct: 307 KEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLISWQEGAKWF 365
Query: 262 DELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 366 MDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|423528953|ref|ZP_17505398.1| hypothetical protein IGE_02505 [Bacillus cereus HuB1-1]
gi|402449821|gb|EJV81656.1| hypothetical protein IGE_02505 [Bacillus cereus HuB1-1]
Length = 476
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 122/265 (46%), Gaps = 26/265 (9%)
Query: 62 PLRDDHDEKYGVPTLEELGFDIEGLLP---------PTWKGGETEAMRRLERHLERKAWV 112
P+R K+G L LLP W E A + ++ K
Sbjct: 159 PIRKVQSIKWGSSLPASLSVSELHLLPTIPWTSHMEAIWNPTEEGAYKTFKKFFSSKLVS 218
Query: 113 ASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL-NKLYKR----IKKAPPPLS 165
S GR P S+LA P+L FG +S +L +H L NK +R +K S
Sbjct: 219 YSEGRDFPDQNVHSMLA------PYLSFGQISVKLMFHYLINKSTERQCSLFEKQVN--S 270
Query: 166 LHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMT 225
QL+WREF Y P N PWD E L+ W +TG+P+IDA M
Sbjct: 271 FIRQLIWREFSYYLLYHYPFTVSKPLNKSFENFPWDKEEELLSVWQKGETGYPFIDAGMR 330
Query: 226 QLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-S 284
+L + G++H+ AR AVA FL + L + W+EG K F + LLDAD + N W W++ S +
Sbjct: 331 ELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMDTLLDADIANNTMGWQWVAGSGA 389
Query: 285 FFQQFFHCYCPVKFGRKADPNGDFI 309
+F + P+ G K D NG++I
Sbjct: 390 DASPYFRIFNPITQGEKFDKNGEYI 414
>gi|126175256|ref|YP_001051405.1| deoxyribodipyrimidine photo-lyase [Shewanella baltica OS155]
gi|386342009|ref|YP_006038375.1| deoxyribodipyrimidine photo-lyase [Shewanella baltica OS117]
gi|125998461|gb|ABN62536.1| Deoxyribodipyrimidine photo-lyase type I [Shewanella baltica OS155]
gi|334864410|gb|AEH14881.1| Deoxyribodipyrimidine photo-lyase [Shewanella baltica OS117]
Length = 505
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 23/230 (10%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTR----LF 146
W GE +A R L +++K V + + + P + + +SP+L G +S R
Sbjct: 223 WAAGEGQAKRILSAFIQQK--VQDYKQDRDFPA--IDGTSSISPYLAIGVISPRQCVAAL 278
Query: 147 YHDLNKLYKRIKKAPPPLSLHGQLLWREFF------YCAATRNPNFDRMLGNPICVQIPW 200
HD ++ + P + +L WREF+ + ++N NF+R + + W
Sbjct: 279 LHDFPEVI--VDDTSPARTWLNELTWREFYRHLLVAFPDLSKNHNFNRQADH-----VQW 331
Query: 201 DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKI 260
N + A W +TG+P +DA M QL + GW+H+ R VA FLT+ L + W G +
Sbjct: 332 RNNPQEFAAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERY 390
Query: 261 FDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F + L+D D + N G W W + C Q +F + P+ K DP+G FI
Sbjct: 391 FRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFDPDGSFI 440
>gi|373950404|ref|ZP_09610365.1| Deoxyribodipyrimidine photo-lyase [Shewanella baltica OS183]
gi|386323758|ref|YP_006019875.1| deoxyribodipyrimidine photo-lyase [Shewanella baltica BA175]
gi|333817903|gb|AEG10569.1| Deoxyribodipyrimidine photo-lyase [Shewanella baltica BA175]
gi|373887004|gb|EHQ15896.1| Deoxyribodipyrimidine photo-lyase [Shewanella baltica OS183]
Length = 503
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 23/230 (10%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTR----LF 146
W GE +A R L +++K V + + + P + + +SP+L G +S R
Sbjct: 223 WAAGEGQAKRILSAFIQQK--VQDYKQDRDFPA--IDGTSSISPYLAIGVVSPRQCVAAL 278
Query: 147 YHDLNKLYKRIKKAPPPLSLHGQLLWREFF------YCAATRNPNFDRMLGNPICVQIPW 200
HD ++ + P + +L WREF+ + ++N NF+R + + W
Sbjct: 279 LHDFPEVI--VDDTSPARTWLNELTWREFYRHLLVAFPDLSKNHNFNRQADH-----VQW 331
Query: 201 DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKI 260
N + A W +TG+P +DA M QL + GW+H+ R VA FLT+ L + W G +
Sbjct: 332 RNNPQEFAAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERY 390
Query: 261 FDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F + L+D D + N G W W + C Q +F + P+ K DP+G FI
Sbjct: 391 FRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFDPDGSFI 440
>gi|389848325|ref|YP_006350564.1| deoxyribodipyrimidine photolyase [Haloferax mediterranei ATCC
33500]
gi|448618531|ref|ZP_21666768.1| deoxyribodipyrimidine photolyase [Haloferax mediterranei ATCC
33500]
gi|388245631|gb|AFK20577.1| deoxyribodipyrimidine photolyase [Haloferax mediterranei ATCC
33500]
gi|445746902|gb|ELZ98360.1| deoxyribodipyrimidine photolyase [Haloferax mediterranei ATCC
33500]
Length = 482
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 17/300 (5%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSP-----AEAPVTPLLVRQATTPLRD-DHDEKYG- 72
I N G Y F D P P A++ V ++ A+ L D D D G
Sbjct: 132 ITTNAGDPYSVYTYFWKKWRDRDKPDPYPEPDADSLVDAAVLEAASETLSDADFDVAVGD 191
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+PT+ +LGFD G A +RL E + + + P S+ L
Sbjct: 192 LPTISDLGFDEPS--ADIVSAGTDAARKRLADFCEDA--IYRYADDRDYPARNATSR--L 245
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRML 190
S L+FG + R Y + + + ++ + QL WREF+ NPN
Sbjct: 246 STDLKFGTIGIREVYAATAEAREGVGGEQDESVETFQSQLAWREFYAHVLRYNPNVVTEN 305
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
I W + + LA W +TG+P +DA M QL++E ++H+ R VA FLT+ DL
Sbjct: 306 YKEYEHDIQWRDDSDELAAWKEGRTGYPIVDAGMRQLKKEAYMHNRVRMIVASFLTK-DL 364
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+W G F E L D D + + G W W S + Q +F + P+ G + DP+G++I
Sbjct: 365 LCNWRHGYDHFREYLSDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDGEYI 424
>gi|298708262|emb|CBJ48325.1| cryptochrome 2 [Ectocarpus siliculosus]
Length = 571
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 126/270 (46%), Gaps = 23/270 (8%)
Query: 27 TPLTYHQFQSIV-----AKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGF 81
P + QF+ V KM P P +P P V TT + +PT EELG
Sbjct: 186 VPEIFTQFRKSVESKYSCKMRPPVPLPSPFRP--VPTGTTQDDGEASAPGAIPTTEELGL 243
Query: 82 ------DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS--QTGLS 133
D + P + GGET +RR++ ++ + + + K+T LL S + S
Sbjct: 244 GTAPERDARSVFP--FNGGETAGLRRVQSYIWDEDRLREY---KVTRNGLLGSGFSSKFS 298
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
P+L GCLS R ++ K L +LLWR+FF +A +N N LG P
Sbjct: 299 PWLALGCLSPRTIVKEIRKYETDRIANDSTYWLIFELLWRDFFRYSAVKNGNSIFHLGGP 358
Query: 194 --ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
+ W + +L W +TG+P IDA M +L+ G++ + R VA F TR DL
Sbjct: 359 RRDTGRQRWLDDAGSLEAWKEGETGYPLIDANMRELKASGFMSNRGRQVVASFFTR-DLQ 417
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMWLS 281
+ W G + F+E LLD D + N G W +++
Sbjct: 418 MDWRLGAEHFEEYLLDHDPASNWGNWNYVA 447
>gi|423465178|ref|ZP_17441946.1| hypothetical protein IEK_02365 [Bacillus cereus BAG6O-1]
gi|402418939|gb|EJV51227.1| hypothetical protein IEK_02365 [Bacillus cereus BAG6O-1]
Length = 476
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W E A + ++ K S GR P S+LA P+L FG +S R
Sbjct: 193 MEAIWDPTEEGAYKTFKKFFSSKLVFYSEGRDFPDQNVHSMLA------PYLSFGQISVR 246
Query: 145 LFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L YH L NK +R +K S QL+WREF Y P N P
Sbjct: 247 LMYHYLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNNEEELLTVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|423636149|ref|ZP_17611802.1| hypothetical protein IK7_02558 [Bacillus cereus VD156]
gi|401276137|gb|EJR82094.1| hypothetical protein IK7_02558 [Bacillus cereus VD156]
Length = 476
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W E A + ++ K S GR P S+LA P+L FG + +
Sbjct: 193 MEAIWDPTEEGAYKVFKKFFSSKLAFYSEGRDFPNQNAHSMLA------PYLSFGQIPVK 246
Query: 145 LFYHDL-NKLYKRIKK--APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWD 201
L YH L NK +R +S QL+WREF Y P N PW+
Sbjct: 247 LMYHYLINKSTERQCSLFEKQVISFIRQLIWREFSYYLLYHYPFTVYKPLNKNFEHFPWN 306
Query: 202 VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L +SW+EG K F
Sbjct: 307 KEEELLRVWQRGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLISWQEGAKWF 365
Query: 262 DELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 366 MDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|91204921|ref|YP_537276.1| deoxyribodipyrimidine photo-lyase [Rickettsia bellii RML369-C]
gi|91068465|gb|ABE04187.1| Deoxyribodipyrimidine photo-lyase [Rickettsia bellii RML369-C]
Length = 475
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 11/188 (5%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFFYCAATRN 183
L + +SP+LRFG +S R Y K A P S+ +L+WREF+
Sbjct: 246 LDGTSTISPYLRFGLVSIRECYR------KAFNAASNPGSITWINELIWREFYATILYHF 299
Query: 184 PN-FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
PN + +IPW+ E K+ NA+TG+P IDA + QL +GW+H+ AR VA
Sbjct: 300 PNTVNEEFLEKYKNKIPWNNKKEYFDKFINAETGYPIIDAAVKQLVGDGWMHNRARMIVA 359
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL-SCSSFFQQFFHCYCPVKFGRK 301
F ++ +L + W +G + F + L+D + + N G W W SC + Q +F + P G+
Sbjct: 360 SFFSK-NLLLDWRKGEEFFAQYLMDYELASNVGGWQWASSCGTDAQPYFRIFNPYTQGKN 418
Query: 302 ADPNGDFI 309
DP+ ++I
Sbjct: 419 FDPDAEYI 426
>gi|126658357|ref|ZP_01729506.1| deoxyribopyrimidine photolyase [Cyanothece sp. CCY0110]
gi|126620289|gb|EAZ91009.1| deoxyribopyrimidine photolyase [Cyanothece sp. CCY0110]
Length = 476
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 14/242 (5%)
Query: 73 VPTLEELGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+PT ++LG+ D LL P GET A +L + + S+ + P + + +
Sbjct: 191 LPTAKDLGYSWDAPLLLEP----GETAAKEQLNYFSDNA--IYSYQEQRNLP--AIDATS 242
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNFD 187
LSP +FG + R + + Y+ + ++ ++ WREF+ P
Sbjct: 243 KLSPAFKFGIIGIREVWQATVEAYENTRSDEARENIQTWQQEIAWREFYQHCLYFFPELA 302
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
+ PWD N + W +TG+P +DA M QL E GW+H+ R VA FLT+
Sbjct: 303 EGPYRDEFKEFPWDNNEQHFQAWCEGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFLTK 362
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL ++W+ G K F + L+D D S N G W W + S + + P +K DP+G+
Sbjct: 363 -DLIINWQWGEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAQKYDPDGE 421
Query: 308 FI 309
+I
Sbjct: 422 YI 423
>gi|229097643|ref|ZP_04228601.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock3-29]
gi|229116646|ref|ZP_04246032.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock1-3]
gi|423379068|ref|ZP_17356352.1| hypothetical protein IC9_02421 [Bacillus cereus BAG1O-2]
gi|423442112|ref|ZP_17419018.1| hypothetical protein IEA_02442 [Bacillus cereus BAG4X2-1]
gi|423534525|ref|ZP_17510943.1| hypothetical protein IGI_02357 [Bacillus cereus HuB2-9]
gi|423540200|ref|ZP_17516591.1| hypothetical protein IGK_02292 [Bacillus cereus HuB4-10]
gi|423546432|ref|ZP_17522790.1| hypothetical protein IGO_02867 [Bacillus cereus HuB5-5]
gi|423623773|ref|ZP_17599551.1| hypothetical protein IK3_02371 [Bacillus cereus VD148]
gi|228666818|gb|EEL22274.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock1-3]
gi|228685782|gb|EEL39702.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock3-29]
gi|401173735|gb|EJQ80947.1| hypothetical protein IGK_02292 [Bacillus cereus HuB4-10]
gi|401181001|gb|EJQ88155.1| hypothetical protein IGO_02867 [Bacillus cereus HuB5-5]
gi|401257696|gb|EJR63893.1| hypothetical protein IK3_02371 [Bacillus cereus VD148]
gi|401633514|gb|EJS51291.1| hypothetical protein IC9_02421 [Bacillus cereus BAG1O-2]
gi|402416068|gb|EJV48387.1| hypothetical protein IEA_02442 [Bacillus cereus BAG4X2-1]
gi|402462942|gb|EJV94645.1| hypothetical protein IGI_02357 [Bacillus cereus HuB2-9]
Length = 476
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W E A + ++ K S GR P S+LA P+L FG +S R
Sbjct: 193 MEAIWDPTEEGAYKTFKKFFSSKLVFYSEGRDFPDQNVHSMLA------PYLSFGQISVR 246
Query: 145 LFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L YH L NK +R +K S QL+WREF Y P N P
Sbjct: 247 LMYHYLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNNEEELLTVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|157827751|ref|YP_001496815.1| deoxyribodipyrimidine photo-lyase [Rickettsia bellii OSU 85-389]
gi|157803055|gb|ABV79778.1| Deoxyribodipyrimidine photo-lyase [Rickettsia bellii OSU 85-389]
Length = 475
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 11/188 (5%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFFYCAATRN 183
L + +SP+LRFG +S R Y K A P S+ +L+WREF+
Sbjct: 246 LDGTSTISPYLRFGLVSIRECYR------KAFNAASNPGSITWINELIWREFYATILYHF 299
Query: 184 PN-FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
PN + +IPW+ E K+ NA+TG+P IDA + QL +GW+H+ AR VA
Sbjct: 300 PNTVNEEFLEKYKNKIPWNNKKEYFDKFINAETGYPIIDAAVKQLVGDGWMHNRARMIVA 359
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL-SCSSFFQQFFHCYCPVKFGRK 301
F ++ +L + W +G + F + L+D + + N G W W SC + Q +F + P G+
Sbjct: 360 SFFSK-NLLLDWRKGEEFFAQYLMDYELASNVGGWQWASSCGTDAQPYFRIFNPYTQGKN 418
Query: 302 ADPNGDFI 309
DP+ ++I
Sbjct: 419 FDPDAEYI 426
>gi|226315066|ref|YP_002774962.1| deoxyribodipyrimidine photolyase [Brevibacillus brevis NBRC 100599]
gi|226098016|dbj|BAH46458.1| deoxyribodipyrimidine photolyase [Brevibacillus brevis NBRC 100599]
Length = 484
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 118/241 (48%), Gaps = 9/241 (3%)
Query: 73 VPTLEELGFDIE-GLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
VPT+E G + G + GE A +RL++ L+R + ++ + P + + +
Sbjct: 183 VPTVEAFGRNRPMGTEWEMEQFGERAARKRLQQFLDRD--IYTYKEKRDMPG--VNATSR 238
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYK--RIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
LS L G LS R YH + ++ R ++ + +L+WREF+ +P+
Sbjct: 239 LSFALNAGTLSIRTVYHRVQEVLASARGEQVTSIEAFLTELIWREFYQQVLYFHPHTTNH 298
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
P ++ W+ + +W +TG+P +DA M QL E GW+H+ R A FLT+ D
Sbjct: 299 AYLPQFEEVAWENKKDLFVRWCQGETGYPIVDAAMKQLNETGWMHNRLRMITASFLTK-D 357
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
L V W GM F + L+D D + N G W W S + Q +F + PV G K D +G F
Sbjct: 358 LLVDWRWGMAYFAQQLIDFDEAANIGGWQWSASTGTDAQPYFRIFNPVTQGEKFDRDGVF 417
Query: 309 I 309
+
Sbjct: 418 V 418
>gi|423641840|ref|ZP_17617458.1| hypothetical protein IK9_01785 [Bacillus cereus VD166]
gi|401277790|gb|EJR83729.1| hypothetical protein IK9_01785 [Bacillus cereus VD166]
Length = 476
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 112/227 (49%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W E A + ++ RK S GR P S+LA P+L FG +S +L +H
Sbjct: 197 WDPTEEGAYKTFKKFFSRKLVSYSEGRDFPGQNVHSMLA------PYLSFGQISVKLMFH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PWD
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFENFPWDKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F +
Sbjct: 309 EELLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|448402770|ref|ZP_21572126.1| deoxyribodipyrimidine photolyase [Haloterrigena limicola JCM 13563]
gi|445664862|gb|ELZ17552.1| deoxyribodipyrimidine photolyase [Haloterrigena limicola JCM 13563]
Length = 465
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 111/244 (45%), Gaps = 17/244 (6%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG- 131
+P+L +LGFD PPT T A R ER A + Q +++G
Sbjct: 175 IPSLADLGFDEPEATPPTVT---TAAAR------ERVAAFCAGPIYDYAAQRDYPAESGT 225
Query: 132 --LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNF 186
LSP L++G + R Y + R S+ QL WREF+ NP
Sbjct: 226 SRLSPHLKWGTIGPRELYATTERAAGRAPTDDDRESVRAFQRQLAWREFYAHVLEFNPET 285
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
+ +I W + L W +TG+P +DA M QLR EGW+H+ R VA FLT
Sbjct: 286 VTENFSGYENEIEWRNDPAELEAWKAGETGYPIVDAGMRQLRAEGWMHNRVRMLVASFLT 345
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL-SCSSFFQQFFHCYCPVKFGRKADPN 305
+ DL W G F L D D + + G W W S + Q +F + P+K GR+ DP+
Sbjct: 346 K-DLLTDWRAGYDWFRAKLADHDTANDVGGWQWAGSTGTDAQPYFRVFNPMKQGREYDPD 404
Query: 306 GDFI 309
G++I
Sbjct: 405 GEYI 408
>gi|407705549|ref|YP_006829134.1| hypothetical protein MC28_2313 [Bacillus thuringiensis MC28]
gi|407383234|gb|AFU13735.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis MC28]
Length = 476
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 116/235 (49%), Gaps = 21/235 (8%)
Query: 83 IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGC 140
IE + PT +G A + ++ K S GR P S+LA P+L FG
Sbjct: 193 IESIWEPTEEG----AYKTCKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQ 242
Query: 141 LSTRLFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
+S RL YH L NK +R +K S QL+WREF Y P N
Sbjct: 243 ISVRLMYHYLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+
Sbjct: 301 EHFPWNNEDELLTVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 360 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|383480261|ref|YP_005389155.1| deoxyribodipyrimidine photolyase protein PhrB [Streptococcus
pyogenes MGAS15252]
gi|383494243|ref|YP_005411919.1| deoxyribodipyrimidine photolyase protein PhrB [Streptococcus
pyogenes MGAS1882]
gi|378928251|gb|AFC66457.1| deoxyribodipyrimidine photolyase protein PhrB [Streptococcus
pyogenes MGAS15252]
gi|378929970|gb|AFC68387.1| deoxyribodipyrimidine photolyase protein PhrB [Streptococcus
pyogenes MGAS1882]
Length = 469
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
EA ++L R ++ + +A++ + P L S+ LSPFLR G + R YH
Sbjct: 200 EASKQLNRFIQDQ--LAAYHANRDFPAQLGTSR--LSPFLRIGAIGIRTVYH-------A 248
Query: 157 IKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
+++AP L + +L WR+F+ P+ QI W N + W
Sbjct: 249 VRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPDWFQLWKEG 308
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
+TG+P +DA M QL++ GW+H+ R VA FLT+ DL W G + F + L+D D + N
Sbjct: 309 KTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK-DLLCDWRLGEQYFQQQLIDYDAASN 367
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + PV G++ DP G+FI
Sbjct: 368 IGGWQWAASTGTDAVPYFRIFNPVTQGKRFDPKGEFI 404
>gi|75910490|ref|YP_324786.1| deoxyribodipyrimidine photo-lyase type I [Anabaena variabilis ATCC
29413]
gi|75704215|gb|ABA23891.1| deoxyribodipyrimidine photo-lyase type I [Anabaena variabilis ATCC
29413]
Length = 479
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 129/296 (43%), Gaps = 20/296 (6%)
Query: 22 KNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGV---PTLEE 78
++G TP T + + K S P PV L + T + +K GV PT ++
Sbjct: 140 RSGSNTPYTVY---TPFWKNWSSKPKAKPVETLHNVEGLTEAEQELAQKAGVKALPTAKD 196
Query: 79 LGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
LGF D + ++ P GE A +L + + + + P SQ LS L
Sbjct: 197 LGFFWDADLIIAP----GEAAAQAKLAEFTAKA--ITEYQEQRNFPGVNGTSQ--LSAAL 248
Query: 137 RFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRMLGNP 193
+FG + R + + + + S+ +L WREF+ A P
Sbjct: 249 KFGVIGIRTVWQTTLEALENSRSEETTTSIRTWQQELAWREFYQHAMYNFPELADGAYRA 308
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
PW+ N E W +TG+P +DA M Q+ E GW+H+ R VA FLT+ DL ++
Sbjct: 309 TFKNFPWETNEEHFQAWCEGKTGYPIVDAAMRQMNESGWMHNRCRMIVASFLTK-DLLIN 367
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ G K F + L+D D S N G W W + S + + P +K DP+ ++I
Sbjct: 368 PQWGEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPLRIFNPASQSQKFDPDAEYI 423
>gi|19746457|ref|NP_607593.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes MGAS8232]
gi|306827047|ref|ZP_07460345.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes ATCC
10782]
gi|19748660|gb|AAL98092.1| putative deoxyribodipyrimidine photolyase [Streptococcus pyogenes
MGAS8232]
gi|304430793|gb|EFM33804.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes ATCC
10782]
Length = 469
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
EA ++L R ++ + +A++ + P L S+ LSPFLR G + R YH
Sbjct: 200 EASKQLNRFIQDQ--LAAYHANRDFPAQLGTSR--LSPFLRIGAIGIRTVYH-------A 248
Query: 157 IKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
+++AP L + +L WR+F+ P+ QI W N + W
Sbjct: 249 VRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPDWFQLWKEG 308
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
+TG+P +DA M QL++ GW+H+ R VA FLT+ DL W G + F + L+D D + N
Sbjct: 309 KTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK-DLLCDWRLGEQYFQQQLIDYDAASN 367
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + PV G++ DP G+FI
Sbjct: 368 IGGWQWAASTGTDAVPYFRIFNPVTQGKRFDPKGEFI 404
>gi|15675407|ref|NP_269581.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes SF370]
gi|71911049|ref|YP_282599.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes MGAS5005]
gi|410680903|ref|YP_006933305.1| deoxyribodipyrimidine photo-lyase [Streptococcus pyogenes A20]
gi|13622594|gb|AAK34302.1| putative deoxyribodipyrimidine photolyase [Streptococcus pyogenes
M1 GAS]
gi|71853831|gb|AAZ51854.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes MGAS5005]
gi|395454290|dbj|BAM30629.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes M1 476]
gi|409693492|gb|AFV38352.1| deoxyribodipyrimidine photo-lyase [Streptococcus pyogenes A20]
Length = 469
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
EA ++L R ++ + +A++ + P L S+ LSPFLR G + R YH
Sbjct: 200 EASKQLNRFIQDQ--LAAYHANRDFPAQLGTSR--LSPFLRIGAIGIRTVYH-------A 248
Query: 157 IKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
+++AP L + +L WR+F+ P+ QI W N + W
Sbjct: 249 VRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPDWFQLWKEG 308
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
+TG+P +DA M QL++ GW+H+ R VA FLT+ DL W G + F + L+D D + N
Sbjct: 309 KTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK-DLLCDWRLGEQYFQQQLIDYDAASN 367
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + PV G++ DP G+FI
Sbjct: 368 IGGWQWAASTGTDAVPYFRIFNPVTQGKRFDPKGEFI 404
>gi|119486492|ref|ZP_01620550.1| probable bacterial cryptochrome [Lyngbya sp. PCC 8106]
gi|119456394|gb|EAW37525.1| probable bacterial cryptochrome [Lyngbya sp. PCC 8106]
Length = 515
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 135/297 (45%), Gaps = 31/297 (10%)
Query: 25 GKTPLTYHQFQSIVAKMDS-----PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEEL 79
+ P + QF+ V K + P+P P+ P + E +PTL++L
Sbjct: 171 NRIPEVFTQFRKQVEKNGTIYASFPTPQRLPILPQI-------------EVGELPTLQKL 217
Query: 80 G-----FDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGL 132
G FD +L ++GGET + RL ++ + + + K T +L + +
Sbjct: 218 GLETPQFDQRSVL--KFQGGETAGISRLTDYIWEQDCLKDY---KQTRNGMLGANYSSKF 272
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGN 192
SP+L GCLS R Y + ++ K L +LLWR++F ++ N L
Sbjct: 273 SPWLALGCLSPRFIYDHVQDYEEQRVKNDSTYWLVFELLWRDYFRFICLKHGNKIFRLSG 332
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
V IPW + E W TGFP +DA M +L G++ + R VA FLT+ +L +
Sbjct: 333 LQGVSIPWKEDWERFECWRTGTTGFPLVDANMRELAATGFMSNRGRQNVASFLTK-NLGI 391
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+W+ G + F+ LL+D D N G W + + + F + K + D NGD++
Sbjct: 392 NWKMGAEWFESLLVDYDVCSNWGNWNYTAGVGNDARGFRYFNIPKQAKDYDSNGDYV 448
>gi|326315673|ref|YP_004233345.1| deoxyribodipyrimidine photo-lyase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323372509|gb|ADX44778.1| Deoxyribodipyrimidine photo-lyase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 495
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 23/247 (9%)
Query: 73 VPTLEELGFDIEGL----LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
VP L ++GF+ GL LPP +G T L+ L+R + +G + P +
Sbjct: 197 VPALADIGFEPAGLDRLPLPPGMEGART----LLDDFLQR---IDQYGEARDFPA--VKG 247
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL-HGQLLWREFFYCAATRNPNFD 187
+ LS LRFG LS R ++R+++ + +L+WR+F++ +P
Sbjct: 248 PSYLSVHLRFGTLSPRRA---ARAAHERMRQGSTGAATWLSELIWRDFYFQVLAHHPQVA 304
Query: 188 RMLG-NPICVQIPWDVN---MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P IPW+ E A W +TG+P +DA M Q+ + G++H+ R VA
Sbjct: 305 GGASFKPAYDAIPWEDGPQAQERFAAWCEGRTGYPLVDAAMAQINQTGYMHNRLRMVVAS 364
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF-FQQFFHCYCPVKFGRKA 302
FL + DL V W G + F E L D D S N G W W S S Q +F + PV RK
Sbjct: 365 FLVK-DLGVDWRRGERYFAEKLNDFDLSANNGGWQWASSSGCDAQPYFRIFNPVSQSRKF 423
Query: 303 DPNGDFI 309
DP G FI
Sbjct: 424 DPKGRFI 430
>gi|94994739|ref|YP_602837.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes MGAS10750]
gi|94548247|gb|ABF38293.1| Deoxyribodipyrimidine photolyase [Streptococcus pyogenes MGAS10750]
Length = 477
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
EA ++L R ++ + +A++ + P L S+ LSPFLR G + R YH
Sbjct: 208 EASKQLNRFIQDQ--LAAYHANRDFPAQLGTSR--LSPFLRIGAIGIRTVYH-------A 256
Query: 157 IKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
+++AP L + +L WR+F+ P+ QI W N + W
Sbjct: 257 VRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPDWFQLWKEG 316
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
+TG+P +DA M QL++ GW+H+ R VA FLT+ DL W G + F + L+D D + N
Sbjct: 317 KTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK-DLLCDWRLGEQYFQQQLIDYDAASN 375
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + PV G++ DP G+FI
Sbjct: 376 IGGWQWAASTGTDAVPYFRIFNPVTQGKRFDPKGEFI 412
>gi|425462955|ref|ZP_18842418.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9808]
gi|389823910|emb|CCI27577.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9808]
Length = 474
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 109/244 (44%), Gaps = 10/244 (4%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
E +PTLE LGF + LP GE A RLE + + ++ + P
Sbjct: 183 ETINLPTLENLGFTWQNPLPLA--PGEKAARSRLEEFCQ--GVINNYQEDRNFP--AFDG 236
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPN 185
+ LS L+FG + R + +L + + S+ +L WREF+ P
Sbjct: 237 TSRLSAALKFGAIGIRTIWTATLELLENCRAQEAKDSIITWQQELAWREFYQHCLYFFPE 296
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
PW N E W +TG+P +DA M QL E GW+H+ R VA FL
Sbjct: 297 LAVGAYRKEFRHFPWQDNEEHFQAWCQGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFL 356
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
T+ DL ++W++G K F + L D D + N G W W + S + + P +K DP
Sbjct: 357 TK-DLIINWQKGEKYFMQKLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQTQKFDPE 415
Query: 306 GDFI 309
G++I
Sbjct: 416 GEYI 419
>gi|434387598|ref|YP_007098209.1| deoxyribodipyrimidine photolyase [Chamaesiphon minutus PCC 6605]
gi|428018588|gb|AFY94682.1| deoxyribodipyrimidine photolyase [Chamaesiphon minutus PCC 6605]
Length = 478
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 123/297 (41%), Gaps = 24/297 (8%)
Query: 23 NGGKTPLT-YHQFQSIVAKMDSPSPAEAPVTPL------LVRQATTPLRDDHDEKYGVPT 75
G K P T Y F P+P E + P L A P D +PT
Sbjct: 140 TGNKQPYTVYTPFWRNWNSRSKPAPVEVKLPPCQLDATELTDLAQVPTID-------LPT 192
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPF 135
++LGF E P + G + A R L +R + + + P L +GLS
Sbjct: 193 AKDLGFTWEN--PLKLEPGTSAAARELAEFCDRS--ICEYDEQRNYPA--LTGTSGLSAA 246
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRMLGN 192
L+FG + R + + + + +L WREF+ A P+ +
Sbjct: 247 LKFGVIGIRTVWAATIEAMAQTSSDEARAGITTWQQELAWREFYQQAMYHFPSLAQGAYR 306
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
PW + W +TG+P +DA M QL E GW+H+ R VA FLT+ DL +
Sbjct: 307 DPLKHFPWQDDQNRFDAWCRGETGYPIVDAAMRQLNEIGWMHNRCRMIVASFLTK-DLII 365
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+W+ G K F + L+D D S N G W W + S + + P +K DP D+I
Sbjct: 366 NWQWGEKYFMQRLIDGDLSANNGGWQWSASSGMDPKPLRIFNPYTQAQKFDPEADYI 422
>gi|94544269|gb|ABF34317.1| Deoxyribodipyrimidine photolyase [Streptococcus pyogenes MGAS10270]
Length = 477
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
EA ++L R ++ + +A++ + P L S+ LSPFLR G + R YH
Sbjct: 208 EASKQLNRFIQDQ--LAAYHANRDFPAQLGTSR--LSPFLRIGAIGIRTVYH-------A 256
Query: 157 IKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
+++AP L + +L WR+F+ P+ QI W N + W
Sbjct: 257 VRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPDWFQLWKEG 316
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
+TG+P +DA M QL++ GW+H+ R VA FLT+ DL W G + F + L+D D + N
Sbjct: 317 KTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK-DLLCDWRLGEQYFQQQLIDYDAASN 375
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + PV G++ DP G+FI
Sbjct: 376 IGGWQWAASTGTDAVPYFRIFNPVTQGKRFDPKGEFI 412
>gi|443475122|ref|ZP_21065081.1| Deoxyribodipyrimidine photo-lyase [Pseudanabaena biceps PCC 7429]
gi|443020045|gb|ELS34048.1| Deoxyribodipyrimidine photo-lyase [Pseudanabaena biceps PCC 7429]
Length = 489
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 10/240 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+P+L EL F + LP + GE+ A+ LE + + + + P A + L
Sbjct: 203 LPSLRELKFINDITLP---ESGESAALALLEAFCDGNG-ILRYQTERDFPAH--AGTSTL 256
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRM 189
SP LRFG + R + + ++ + +L WREF+ P
Sbjct: 257 SPHLRFGTVGIRRVWEKAIAAQQLVRSDEDLAGITIWQQELAWREFYQHVLFHFPALATG 316
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
P PWD + E W TG+P +DA M QL + GW+H+ R VA FLT+ D
Sbjct: 317 AYRPQMQSFPWDDDPEKFEAWCAGLTGYPIVDAAMRQLNQTGWMHNRCRMIVASFLTK-D 375
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L ++W+ G + F + LLD D + N G W W + S + + P RK DP G++I
Sbjct: 376 LIINWQLGERYFMQKLLDGDLAANNGGWQWSASSGMDPKPLRIFNPASQARKYDPEGEYI 435
>gi|21910695|ref|NP_664963.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes MGAS315]
gi|28895615|ref|NP_801965.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes SSI-1]
gi|21904898|gb|AAM79766.1| putative deoxyribodipyrimidine photolyase [Streptococcus pyogenes
MGAS315]
gi|28810864|dbj|BAC63798.1| putative deoxyribodipyrimidine photolyase [Streptococcus pyogenes
SSI-1]
Length = 469
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
EA ++L R ++ + +A++ + P L S+ LSPFLR G + R YH
Sbjct: 200 EASKQLNRFIQDQ--LAAYHANRDFPAQLGTSR--LSPFLRIGAIGIRTVYH-------A 248
Query: 157 IKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
+++AP L + +L WR+F+ P+ QI W N + W
Sbjct: 249 VRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPDWFQLWKEG 308
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
+TG+P +DA M QL++ GW+H+ R VA FLT+ DL W G + F + L+D D + N
Sbjct: 309 KTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK-DLLCDWRLGEQYFQQQLIDYDAASN 367
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + PV G++ DP G+FI
Sbjct: 368 IGGWQWAASTGTDAVPYFRIFNPVTQGKRFDPKGEFI 404
>gi|347758242|ref|YP_004865804.1| DNA photolyase family protein [Micavibrio aeruginosavorus ARL-13]
gi|347590760|gb|AEP09802.1| DNA photolyase family protein [Micavibrio aeruginosavorus ARL-13]
Length = 476
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 110/225 (48%), Gaps = 15/225 (6%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GE A RL + L+ + + + P S+ LSP L FG +S R +H +
Sbjct: 203 WTPGEHGARERLGQFLDHG--LKGYKEGRNHPDRENVSR--LSPHLHFGEISPRTAWHAV 258
Query: 151 NKLYKRIKKAPPPLSLHG-----QLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNME 205
+ +A P + G +L WREF Y +P+ PWD N +
Sbjct: 259 ----RHAMEADPTIETDGDCFLSELGWREFSYSLLYTHPDLPTQPLQHKFAGFPWDKNDK 314
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
AL W +TG+P +DA M QL + GW+H+ R VA FL + DL + W G + F + L
Sbjct: 315 ALRAWQMGKTGYPIVDAGMRQLWQTGWMHNRVRMIVASFLIK-DLMLPWTAGEEWFWDTL 373
Query: 266 LDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+DAD + NA W W++ C + +F + PV G K DP+G++I
Sbjct: 374 VDADLANNAASWQWVAGCGADAAPYFRIFNPVTQGTKFDPDGNYI 418
>gi|386363038|ref|YP_006072369.1| deoxyribodipyrimidine photo-lyase [Streptococcus pyogenes Alab49]
gi|421892494|ref|ZP_16323147.1| Deoxyribodipyrimidine photolyase [Streptococcus pyogenes NS88.2]
gi|350277447|gb|AEQ24815.1| deoxyribodipyrimidine photo-lyase [Streptococcus pyogenes Alab49]
gi|379981746|emb|CCG26869.1| Deoxyribodipyrimidine photolyase [Streptococcus pyogenes NS88.2]
Length = 469
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
EA ++L R ++ + +A++ + P L S+ LSPFLR G + R YH
Sbjct: 200 EASKQLNRFIQDQ--LAAYHANRDFPAQLGTSR--LSPFLRIGAIGIRTVYH-------A 248
Query: 157 IKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
+++AP L + +L WR+F+ P+ QI W N + W
Sbjct: 249 VRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPDWFQLWKEG 308
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
+TG+P +DA M QL++ GW+H+ R VA FLT+ DL W G + F + L+D D + N
Sbjct: 309 KTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK-DLLCDWRLGEQYFQQQLIDYDAASN 367
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + PV G++ DP G+FI
Sbjct: 368 IGGWQWAASTGTDAVPYFRIFNPVTQGKRFDPKGEFI 404
>gi|291570180|dbj|BAI92452.1| deoxyribopyrimidine photolyase [Arthrospira platensis NIES-39]
Length = 474
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 110/243 (45%), Gaps = 14/243 (5%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQ 129
+PT ++LGF P + GET A RLE +R + GR P + S+L
Sbjct: 188 ALPTAKDLGFIWSE--PFILEPGETAASDRLEIFCDRAIYEYDEGRNFPAIDGTSVL--- 242
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNF 186
SP LRFG + R + ++ + + +L WREF+ A P
Sbjct: 243 ---SPALRFGAIGIRTLWQKTQEIIALTRSDEARHHIQTWQQELAWREFYQQALYHFPAL 299
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
+ PW N E W +TG+P +DA M QL + GW+H+ R VA FLT
Sbjct: 300 AIGAFRQPFDRFPWSDNQEHFQAWCQGRTGYPIVDAAMRQLNQTGWMHNRCRMIVASFLT 359
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
+ DL ++W+ G K F + L+D D + N G W W S S + + P +K DP
Sbjct: 360 K-DLIINWQWGEKYFMQTLIDGDLASNNGGWQWSSSSGMDPKPLRIFNPASQTQKYDPEA 418
Query: 307 DFI 309
++I
Sbjct: 419 EYI 421
>gi|71903837|ref|YP_280640.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes MGAS6180]
gi|71802932|gb|AAX72285.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes MGAS6180]
Length = 477
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
EA ++L R ++ + +A++ + P L S+ LSPFLR G + R YH
Sbjct: 208 EASKQLNRFIQDQ--LAAYHANRDFPAQLGTSR--LSPFLRIGAIGIRTVYH-------A 256
Query: 157 IKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
+++AP L + +L WR+F+ P+ QI W N + W
Sbjct: 257 VRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPDWFQLWKEG 316
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
+TG+P +DA M QL++ GW+H+ R VA FLT+ DL W G + F + L+D D + N
Sbjct: 317 KTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK-DLLCDWRLGEQYFQQQLIDYDAASN 375
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + PV G++ DP G+FI
Sbjct: 376 IGGWQWAASTGTDAVPYFRIFNPVTQGKRFDPKGEFI 412
>gi|423384690|ref|ZP_17361946.1| hypothetical protein ICE_02436 [Bacillus cereus BAG1X1-2]
gi|401639360|gb|EJS57099.1| hypothetical protein ICE_02436 [Bacillus cereus BAG1X1-2]
Length = 476
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 113/231 (48%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MEAIWDPTEEGAYKTFKKFFSSKLASYSEGRDFPDQNVHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L +H L NK +R +K S QL+WREF Y P N P
Sbjct: 247 LMFHYLVNKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVSKPLNKSFENFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
WD E L+ W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WDKEEELLSVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|206969086|ref|ZP_03230041.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
AH1134]
gi|206736127|gb|EDZ53285.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
AH1134]
Length = 476
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 113/231 (48%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MEAIWDPTEEGAYKTFKKFFSSKLASYSEGRDFPDQNVHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L +H L NK +R +K S QL+WREF Y P N P
Sbjct: 247 LMFHYLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVSKPLNKSFENFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
WD E L+ W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WDKEEELLSVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|383763855|ref|YP_005442837.1| deoxyribodipyrimidine photolyase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384123|dbj|BAM00940.1| deoxyribodipyrimidine photolyase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 475
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 107/221 (48%), Gaps = 8/221 (3%)
Query: 94 GETEAMRRLERHLE-RKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTR---LFYHD 149
GE EA RL R +A + ++ + + P L S + LSP+LRFG LS R L +
Sbjct: 197 GEAEAQARLRRFTTGDEAPIYAYAQARDFPD--LDSTSKLSPYLRFGMLSARQAALAAYQ 254
Query: 150 LNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAK 209
++ + +L+WR+F+Y P+ R I W+ N A
Sbjct: 255 AMDAAANAEQRTGAETWLTELIWRDFYYSILYHFPHVARGCFQRAYDAIIWENNPTHFAA 314
Query: 210 WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDAD 269
W TG+P+IDA M QL GW+H+ AR AVA FL + DL + W G K F + LLD D
Sbjct: 315 WCAGLTGYPFIDAAMRQLAATGWMHNRARMAVASFLVK-DLLIDWRWGEKWFMQRLLDGD 373
Query: 270 WSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G W W + + +F + P G+K DP G +I
Sbjct: 374 LAANNGGWQWSAGVGTDAAPYFRIFNPTAQGQKFDPRGVYI 414
>gi|427730047|ref|YP_007076284.1| deoxyribodipyrimidine photo-lyase, 8-HDF type [Nostoc sp. PCC 7524]
gi|427365966|gb|AFY48687.1| deoxyribodipyrimidine photo-lyase, 8-HDF type [Nostoc sp. PCC 7524]
Length = 479
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 133/298 (44%), Gaps = 24/298 (8%)
Query: 22 KNGGKTPLTYHQ--FQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG---VPTL 76
++G TP T + +++ ++K P PV L T + + ++ G +PT
Sbjct: 140 RSGSNTPYTVYTPFWKNWISK-----PKAQPVATLENTAGLTEKQQELAKQAGAIALPTA 194
Query: 77 EELGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+ELGF D + ++ P GE A +LE + + + + P SQ LS
Sbjct: 195 KELGFVWDTDLIISP----GEAAAQEKLEEFTAKA--ITEYQEQRNFPAVDGTSQ--LSA 246
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRMLG 191
L+FG + R + + + S+ +L WREF+ A P
Sbjct: 247 ALKFGVIGIRTVWQATTAVLEDCNSEEVTTSIRTWQQELAWREFYQHAMYHFPELAEGAY 306
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
I PW+ N E W +TG+P +DA M Q+ E GW+H+ R VA FLT+ DL
Sbjct: 307 RDIFKSFPWENNEEHFLAWCEGKTGYPIVDAAMRQMNEIGWMHNRCRMIVASFLTK-DLL 365
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++ + G K F + L+D D S N G W W + S + + P +K DP+ ++I
Sbjct: 366 INPQWGEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPVRIFNPASQAQKFDPDAEYI 423
>gi|70732464|ref|YP_262226.1| deoxyribodipyrimidine photolyase [Pseudomonas protegens Pf-5]
gi|68346763|gb|AAY94369.1| deoxyribodipyrimidine photolyase [Pseudomonas protegens Pf-5]
Length = 481
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 109/237 (45%), Gaps = 15/237 (6%)
Query: 83 IEGLLPPT------WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
+EG PT W G+ EA RRLE+ + + + + + P SQ LSP+L
Sbjct: 188 VEGFPSPTQALRELWPAGDDEAQRRLEKFSDEQ--IHYYQSERDFPAKPGTSQ--LSPYL 243
Query: 137 RFGCLSTRLFYHDL--NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NP 193
G +S R H + +P ++ +LLWREF+ P R P
Sbjct: 244 AAGVISPRQCLHAALRGNQGEFESGSPGAVTWINELLWREFYKHILVGYPRVSRHRAFRP 303
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+ W E LA W A+TG P IDA M QL E GW+H+ R VA FLT+ +L +
Sbjct: 304 ETEAVKWRHAPEELAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTK-NLLID 362
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
W EG + F L+D D + N G W W S + +F + P+ +K D G FI
Sbjct: 363 WREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPISQSQKFDSEGRFI 419
>gi|298208129|ref|YP_003716308.1| cryptochrome [Croceibacter atlanticus HTCC2559]
gi|83848050|gb|EAP85920.1| probable bacterial cryptochrome [Croceibacter atlanticus HTCC2559]
Length = 421
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 9/237 (3%)
Query: 48 EAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPT---WKGGETEAMRRLER 104
+A V PL+ + P + +E Y +P L++ G + P T +KGGETE ++R+
Sbjct: 151 KAVVRPLVNLEINLPKTNLLNEDYAIPKLKDFGLSEFTVHPNTAFPYKGGETEGLKRINE 210
Query: 105 HLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPP 162
+ +AS+ K T ++ S+ + S +L G +S R Y D+ K++KK
Sbjct: 211 YHWDTNHIASY---KETRNGMIGSEYSSKYSAWLANGSISARQIYWDIKDYEKKVKKNQS 267
Query: 163 PLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDA 222
+ +L+WR++F + + N L + W+ + AL +W N T + +++A
Sbjct: 268 TYWMIFELIWRDYFMYISLKYGNSIFKLNGILSKDYNWNKSKSALKQWINGTTPYDFVNA 327
Query: 223 IMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW 279
M +L+E GW+ + R VA + + +L W G F+ LL+D D N G WM+
Sbjct: 328 NMIELKETGWMSNRGRQNVASYWAK-ELQQDWRIGASYFESLLIDYDVHSNYGNWMY 383
>gi|148467519|gb|ABQ65680.1| antennal cryptochrome 1 [Spodoptera littoralis]
Length = 348
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 106/214 (49%), Gaps = 22/214 (10%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTP--LRDDHDEKYGVPTL 76
+I+ NGG PLTY F VA + P V V+ + P ++ P
Sbjct: 139 VIKANGGIPPLTYQMFLHTVATIGDPPRPVGEVDFTGVKFGSLPESFYNEFTVFDKTPKP 198
Query: 77 EELG--FDIEGLLPPTWKGGETEAMRRLERHLE-------RKAWVASFGRPKMTPQSLLA 127
E+LG + E + W GGET A++++++ L R +++ + G P LL
Sbjct: 199 EDLGVFLENEDIRMIRWVGGETTALKQMQQRLAVEYETFLRGSYLPTHGNP-----DLLG 253
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-----LHGQLLWREFFYCAATR 182
LSP LRFGCLS R FY + L++++ + + + GQL+WRE+FY +
Sbjct: 254 PPISLSPALRFGCLSVRSFYWSVQDLFRQVHQGRLTSNSASHFITGQLIWREYFYTMSVN 313
Query: 183 NPNFDRMLGNPICVQIPWDVNM-EALAKWANAQT 215
NPN+ +M GNPIC+ IPW + L +W +T
Sbjct: 314 NPNYGQMAGNPICLDIPWKTPAGDELQRWVEGRT 347
>gi|425439515|ref|ZP_18819837.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9717]
gi|389720241|emb|CCH96030.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9717]
Length = 474
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 109/244 (44%), Gaps = 10/244 (4%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
E +PTLE LGF + LP GE A RLE + + ++ + P
Sbjct: 183 ETINLPTLENLGFTWQNPLPLA--PGEKAARSRLEEFCQ--GVINNYQEDRNFPA--FDG 236
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPN 185
+ LS L+FG + R + +L + + S+ +L WREF+ P
Sbjct: 237 TSRLSAALKFGAIGIRTIWTATLELLENCRAEEAKDSIITWQQELAWREFYQHCLYFFPE 296
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
PW N E W +TG+P +DA M QL E GW+H+ R VA FL
Sbjct: 297 LAVGAYRKEFRHFPWQDNEEHFQAWCQGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFL 356
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
T+ DL ++W++G K F + L D D + N G W W + S + + P +K DP
Sbjct: 357 TK-DLIINWQKGEKYFMQKLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQTQKFDPE 415
Query: 306 GDFI 309
G++I
Sbjct: 416 GEYI 419
>gi|289208005|ref|YP_003460071.1| deoxyribodipyrimidine photo-lyase [Thioalkalivibrio sp. K90mix]
gi|288943636|gb|ADC71335.1| Deoxyribodipyrimidine photo-lyase [Thioalkalivibrio sp. K90mix]
Length = 469
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 106/230 (46%), Gaps = 7/230 (3%)
Query: 81 FDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGC 140
D G L TW GE A RLER LE+ +A + + P S+ LSP L FG
Sbjct: 193 IDWAGGLRATWTPGERGARDRLERFLEQA--IAGYADSRDRPDQDGTSR--LSPHLHFGE 248
Query: 141 LSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW 200
+S R L + P S +L WR+F + P+ NP PW
Sbjct: 249 VSPRQVLRALRDAGVSLDHKGPE-SFVRELGWRDFAHHVLYHFPHTTEQPLNPRFEDFPW 307
Query: 201 DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKI 260
+ LA W +TG P +DA M QL E GW+H+ R V FLT+ +L + W G +
Sbjct: 308 RESEADLAAWQQGRTGIPIVDAAMRQLWETGWMHNRLRMVVGSFLTK-NLRLHWGHGARW 366
Query: 261 FDELLLDADWSVNAGMWMWL-SCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F + L+DAD + N W W C + +F + P + G + DP+G F+
Sbjct: 367 FWDTLVDADLASNTLGWQWAGGCGADAAPYFRIFNPQRQGEQYDPDGRFV 416
>gi|448343517|ref|ZP_21532441.1| deoxyribodipyrimidine photolyase [Natrinema gari JCM 14663]
gi|445622861|gb|ELY76302.1| deoxyribodipyrimidine photolyase [Natrinema gari JCM 14663]
Length = 469
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL------ 126
+P+L+E+GFD PPT T A R ER VA F + + L
Sbjct: 176 IPSLDEVGFDDPEATPPTVT---TAAAR------ER---VADFCSGPIYEYAALRDYPAE 223
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRN 183
+ + LSP L++G + R Y + +R S+ QL WREF+ N
Sbjct: 224 SGTSRLSPHLKWGTIGPRELYAATERAAERAASDGDRESVREFQRQLAWREFYAHVLAFN 283
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PN + +I W + +AL W TG+P +DA M QLR +GW+H+ R VA
Sbjct: 284 PNTVTEDFSGYDNEIDWHDDPDALEAWKAGTTGYPIVDAGMRQLRADGWMHNRVRMLVAS 343
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL-SCSSFFQQFFHCYCPVKFGRKA 302
FLT+ DL W G F E L D D + + G W W S + Q +F + P+K GR+
Sbjct: 344 FLTK-DLLTDWRAGYAWFREKLADHDTANDVGGWQWAGSTGTDAQPYFRVFNPMKQGREY 402
Query: 303 DPNGDFI 309
DP+ ++I
Sbjct: 403 DPDAEYI 409
>gi|397774714|ref|YP_006542260.1| DNA photolyase FAD-binding protein [Natrinema sp. J7-2]
gi|397683807|gb|AFO58184.1| DNA photolyase FAD-binding protein [Natrinema sp. J7-2]
Length = 469
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL------ 126
+P+L+E+GFD PPT T A R ER VA F + + L
Sbjct: 176 IPSLDEVGFDDPEATPPTVT---TAAAR------ER---VADFCSGPIYEYAALRDYPAE 223
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRN 183
+ + LSP L++G + R Y + +R S+ QL WREF+ N
Sbjct: 224 SGTSRLSPHLKWGTIGPRELYAATERAAERAASDGDRESVREFQRQLAWREFYAHVLAFN 283
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PN + +I W + +AL W TG+P +DA M QLR +GW+H+ R VA
Sbjct: 284 PNTVTEDFSGYDNEIDWHDDPDALEAWKAGTTGYPIVDAGMRQLRADGWMHNRVRMLVAS 343
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL-SCSSFFQQFFHCYCPVKFGRKA 302
FLT+ DL W G F E L D D + + G W W S + Q +F + P+K GR+
Sbjct: 344 FLTK-DLLTDWRAGYAWFREKLADHDTANDVGGWQWAGSTGTDAQPYFRVFNPMKQGREY 402
Query: 303 DPNGDFI 309
DP+ ++I
Sbjct: 403 DPDAEYI 409
>gi|166363455|ref|YP_001655728.1| DNA photolyase [Microcystis aeruginosa NIES-843]
gi|166085828|dbj|BAG00536.1| DNA photolyase [Microcystis aeruginosa NIES-843]
Length = 474
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 110/244 (45%), Gaps = 10/244 (4%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
E +PTLE LGF + LP T GE A RLE + + ++ + P
Sbjct: 183 ETINLPTLENLGFTWQNPLPLT--PGEKAAHSRLEEFCQ--GVINNYQEDRNFP--AFDG 236
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRI---KKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LS L+FG + R + +L + + ++ +L WREF+ P
Sbjct: 237 TSRLSAALKFGAIGIRTIWTATLELLENCCAQEAKDSIITWQQELAWREFYQHCLYFFPE 296
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
PW N E W +TG+P +DA M QL E GW+H+ R VA FL
Sbjct: 297 LAVGAYRKEFRHFPWQDNEEHFQAWCQGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFL 356
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
T+ DL ++W++G K F + L D D + N G W W + S + + P +K DP
Sbjct: 357 TK-DLIINWQKGEKYFMQKLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQTQKFDPE 415
Query: 306 GDFI 309
G++I
Sbjct: 416 GEYI 419
>gi|423447663|ref|ZP_17424542.1| hypothetical protein IEC_02271 [Bacillus cereus BAG5O-1]
gi|401130074|gb|EJQ37743.1| hypothetical protein IEC_02271 [Bacillus cereus BAG5O-1]
Length = 476
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W E A + ++ K S GR P S+LA P+L FG +S R
Sbjct: 193 MEAIWDPTEEGAYKTFKKFFSSKLVFYSEGRDFPDQNVHSMLA------PYLSFGQISVR 246
Query: 145 LFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L YH L NK +R +K S QL+WREF Y P N P
Sbjct: 247 LMYHYLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNNEEELLTVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + L+DAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 364 WFMDTLIDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|172037341|ref|YP_001803842.1| DNA photolyase [Cyanothece sp. ATCC 51142]
gi|354553774|ref|ZP_08973080.1| Deoxyribodipyrimidine photo-lyase [Cyanothece sp. ATCC 51472]
gi|171698795|gb|ACB51776.1| DNA photolyase [Cyanothece sp. ATCC 51142]
gi|353554491|gb|EHC23881.1| Deoxyribodipyrimidine photo-lyase [Cyanothece sp. ATCC 51472]
Length = 476
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 10/240 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+PT ++LG+ + +P + GET A +L H + + S+ + P + + L
Sbjct: 191 LPTAKDLGYGWD--IPLLLELGETAAKEQL--HYFCNSTIYSYQEQRNFP--AIDGTSKL 244
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNFDRM 189
SP +FG + R + + Y+ + ++ ++ WREF+ P
Sbjct: 245 SPAFKFGVIGIREVWQTTIEAYENTRSDEARENIQTWQQEIAWREFYQHCLYFFPELAEG 304
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
PWD N + W +TG+P +DA M QL E GW+H+ R VA FLT+ D
Sbjct: 305 PYREEFQDFPWDNNEDHFQAWCEGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFLTK-D 363
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L ++W+ G K F + L+D D S N G W W + S + + P +K DP+G++I
Sbjct: 364 LMINWQWGEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAQKYDPDGEYI 423
>gi|335346425|gb|AEH41600.1| cry2-like protein [Favia fragum]
Length = 72
Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/70 (70%), Positives = 58/70 (82%)
Query: 219 WIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWM 278
WIDAIM QLR EGWI H+AR AV CFLTRG LWV+WEEG K+FDEL LDA+WS+N G W+
Sbjct: 1 WIDAIMRQLRIEGWIPHVARQAVGCFLTRGCLWVNWEEGYKVFDELQLDAEWSLNVGNWL 60
Query: 279 WLSCSSFFQQ 288
WLS S+F ++
Sbjct: 61 WLSGSTFVKE 70
>gi|443646532|ref|ZP_21129464.1| deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa
DIANCHI905]
gi|159027902|emb|CAO89709.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335725|gb|ELS50187.1| deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa
DIANCHI905]
Length = 474
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 110/244 (45%), Gaps = 10/244 (4%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
E +PTLE LGF + LP T GE A LE + + ++ + P +
Sbjct: 183 ETINLPTLENLGFTWQNPLPLT--PGEKAANSTLEEFCQ--GVINNYQEDRNFP--AVDG 236
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPN 185
+ LS L+FG + R + +L + + S+ +L WREF+ P
Sbjct: 237 TSRLSAALKFGTIGIRTIWTATLELLENCRAQEAKDSIITWQQELAWREFYQHCLYFFPE 296
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
PW N E W +TG+P +DA M QL E GW+H+ R VA FL
Sbjct: 297 LAVGAYRKEFRHFPWQDNEEHFQAWCQGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFL 356
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
T+ DL ++W++G K F + L D D + N G W W + S + + P +K DP
Sbjct: 357 TK-DLIINWQKGEKYFMQKLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQTQKFDPE 415
Query: 306 GDFI 309
G++I
Sbjct: 416 GEYI 419
>gi|448328561|ref|ZP_21517870.1| deoxyribodipyrimidine photolyase [Natrinema versiforme JCM 10478]
gi|445615302|gb|ELY68951.1| deoxyribodipyrimidine photolyase [Natrinema versiforme JCM 10478]
Length = 468
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 131/303 (43%), Gaps = 39/303 (12%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEEL 79
I N G+ + F + D PA P L + P PTL L
Sbjct: 133 ITPNQGEHYSVFSYFWTKWRDRDKRDPAAEPAADDLAAVSGEP----------TPTLAAL 182
Query: 80 GFDIEGLLPPTWKGGETEAMRR---------LERHLERKAWVASFGRPKMTPQSLLASQT 130
GF+ PPT T A R + ++ER+ + A G +++PQ
Sbjct: 183 GFNEPAATPPTVT---TAAARERVADFCSGPIYDYVERRDFPAESGTSRLSPQ------- 232
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFD 187
L++G + R Y + +R + S+ QL WREF+ NP
Sbjct: 233 -----LKWGTIGPRELYAATERAAERAEGDGNRESVREFQRQLAWREFYAHVLAFNPETV 287
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
+ +I W + +ALA W +TG+P +DA M QLR EGW+H+ R VA FLT+
Sbjct: 288 TENFSGYEHEIEWREDPDALAAWQAGETGYPIVDAGMRQLRREGWMHNRVRMLVAAFLTK 347
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNG 306
DL + W G F L D D + + G W W S + + Q +F + P+K GR+ DP+
Sbjct: 348 -DLLLDWRAGYDWFRRTLADHDTANDVGGWQWASSTGTDAQPYFRVFNPMKQGREYDPDA 406
Query: 307 DFI 309
++I
Sbjct: 407 EYI 409
>gi|153001581|ref|YP_001367262.1| deoxyribodipyrimidine photo-lyase [Shewanella baltica OS185]
gi|151366199|gb|ABS09199.1| Deoxyribodipyrimidine photo-lyase [Shewanella baltica OS185]
Length = 500
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 19/228 (8%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GE +A R L +++K V + + + P + + +SP+L G +S R L
Sbjct: 218 WAAGEGQAKRILSAFIQQK--VQDYKQDRDFPA--IDGTSSISPYLAIGVISPRQCVAAL 273
Query: 151 NKLYKRI--KKAPPPLSLHGQLLWREFF------YCAATRNPNFDRMLGNPICVQIPWDV 202
+ + P + +L WREF+ + ++N NF+R + + W
Sbjct: 274 LHHFPEVIVDDTSPARTWLNELTWREFYRHLLVAFPDLSKNHNFNRQADH-----VQWRN 328
Query: 203 NMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFD 262
N + A W +TG+P +DA M QL + GW+H+ R VA FLT+ L + W G + F
Sbjct: 329 NPQEFAAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERYFR 387
Query: 263 ELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ L+D D + N G W W + C Q +F + P+ K DP+G FI
Sbjct: 388 QKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPISQSEKFDPDGSFI 435
>gi|218437350|ref|YP_002375679.1| DASH family cryptochrome [Cyanothece sp. PCC 7424]
gi|218170078|gb|ACK68811.1| cryptochrome, DASH family [Cyanothece sp. PCC 7424]
Length = 488
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 21/320 (6%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKT-------PLTYHQFQSIVAKMDSPSPAEAPVTPLLV 56
++EK+L +L +E G T P +Q + ++ V P+L
Sbjct: 114 TVEKRLKKALAKCNIKVESFWGTTLYHPDNLPFEIYQLPELFTNFRKQVERKSTVAPVLP 173
Query: 57 RQATTPLRDDHDEKYGVPTLEELG-----FDIEGLLPPTWKGGETEAMRRLERHLERKAW 111
+ P D D +P+L ELG F+ G+L ++GGE RL+ ++ +K
Sbjct: 174 APKSLPPLPDLDIG-NLPSLSELGLEPAVFEPRGVL--KFQGGEIAGRERLQDYIWQKNC 230
Query: 112 VASFGRPKMTPQSLLASQ--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQ 169
+ ++ K T +L + + SP+L GCLS R Y ++ K + K L +
Sbjct: 231 LKNY---KETRNEMLGADYSSKFSPWLAHGCLSPRYIYEEVQKYEHQRVKNDSTYWLIFE 287
Query: 170 LLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLRE 229
LLWR+FF ++ N + +PW + + W +TG+P +DA M +L
Sbjct: 288 LLWRDFFRFICAKHGNKIFFSQGLQGIDLPWKEDWQRFKLWQEGKTGYPLVDANMRELAT 347
Query: 230 EGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQF 289
G++ + R VA FLT+ +L ++W G + F+ LL+D D N G W + + +
Sbjct: 348 TGFMSNRGRQNVASFLTK-NLGINWLMGAEWFESLLIDYDVCSNYGNWNYTAGVGNDARG 406
Query: 290 FHCYCPVKFGRKADPNGDFI 309
F + K + DP GD++
Sbjct: 407 FRYFNIPKQSKDYDPKGDYL 426
>gi|347760850|ref|YP_004868411.1| deoxyribodipyrimidine photo-lyase [Gluconacetobacter xylinus NBRC
3288]
gi|347579820|dbj|BAK84041.1| deoxyribodipyrimidine photo-lyase [Gluconacetobacter xylinus NBRC
3288]
Length = 466
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 9/221 (4%)
Query: 90 TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHD 149
TW+ GE RL+ + ++ +A + R + P + + LSP+LRFG +S+R +H
Sbjct: 204 TWQPGEQAGQARLDSFVAKR--MAGYARQRDLPAR--PATSALSPYLRFGHVSSRQVWHA 259
Query: 150 LNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAK 209
+ + + LS G WR+F + P P ++PW + AL
Sbjct: 260 VAAGKEMDEDGACFLSEVG---WRDFAHATLFEFPEMATRSLRPEYDRMPWRTDPAALQA 316
Query: 210 WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDAD 269
W +TG+P +DA M +L GW+H+ R VA FLT+ L + W G + F + L+DAD
Sbjct: 317 WQQGRTGYPIVDAGMRELWHTGWMHNRVRMIVASFLTK-HLLLDWRAGERWFADTLVDAD 375
Query: 270 WSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N W W++ C +F + PV G K DP GD++
Sbjct: 376 GASNPFNWQWVAGCGLDAAPYFRIFNPVLQGEKFDPAGDYV 416
>gi|262403201|ref|ZP_06079761.1| deoxyribodipyrimidine photolyase [Vibrio sp. RC586]
gi|262350700|gb|EEY99833.1| deoxyribodipyrimidine photolyase [Vibrio sp. RC586]
Length = 469
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 113/239 (47%), Gaps = 17/239 (7%)
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
E FD E + W E E +R R R+ V + + + P + LSP+L
Sbjct: 189 EQAFDYERVDSSQWPV-EFETIRNQLRDFCRER-VQDYHQWRDFPAR--TGTSSLSPYLA 244
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQ-----LLWREFFYCAATRNPNFDRMLG- 191
G LS R + +LY+ + A L Q L+WREF+ R PN +
Sbjct: 245 IGALSAR---QCVARLYR--ESAMGVLGEGAQVWLSELIWREFYQHLVAREPNLSKSRDF 299
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
+ + W + E +W QTG+P +DA M QL + GW+H+ R VA FLT+ DL
Sbjct: 300 HEWGSHLEWWNDHEKFQRWCEGQTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTK-DLH 358
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
+ W G + F L+D D++ N G W W + + Q +F + PV G K DPNGDFI
Sbjct: 359 IDWRWGERYFMSQLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFI 417
>gi|206974530|ref|ZP_03235446.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
H3081.97]
gi|206747173|gb|EDZ58564.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
H3081.97]
Length = 476
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 111/231 (48%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTCKKFFSSKLVSYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDLNKLYKRIKKAPPPL-----SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L YH L + K +K S QL+WREF Y P N P
Sbjct: 247 LMYHYL--INKSNEKQCSLFEKQVNSFIRQLIWREFSYYLLYHYPFTVYKPLNKSFENFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
WD E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WDKEEELLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|392307549|ref|ZP_10270083.1| deoxyribodipyrimidine photolyase [Pseudoalteromonas citrea NCIMB
1889]
Length = 462
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPP--LSLHGQLLWREFFYCAATRN 183
+ +GLSP+L G +S + ++ + I + P + +L+WREF+
Sbjct: 226 IKGTSGLSPYLAIGAISVKQLIAEVQCHFPDILQTPSKDEFTWINELIWREFYRHLIVAY 285
Query: 184 PNFDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
PN + N + W+ N E + W TG+P +DA M QL + GW+H+ R VA
Sbjct: 286 PNLCKYRNFNSKYDTVVWNDNEELFSAWCRGDTGYPIVDAAMRQLNQTGWMHNRLRMIVA 345
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRK 301
FLT+ L + W +G + F E L+D D++ N+G W W + + Q +F + PV +K
Sbjct: 346 SFLTK-HLLIDWRKGERYFMEKLIDGDFASNSGGWQWAASTGCDAQPYFRIFNPVTQSKK 404
Query: 302 ADPNGDFI 309
DP G+FI
Sbjct: 405 FDPEGNFI 412
>gi|423398956|ref|ZP_17376156.1| hypothetical protein ICU_04649 [Bacillus cereus BAG2X1-1]
gi|423410080|ref|ZP_17387228.1| hypothetical protein ICY_04764 [Bacillus cereus BAG2X1-3]
gi|401645588|gb|EJS63241.1| hypothetical protein ICU_04649 [Bacillus cereus BAG2X1-1]
gi|401650994|gb|EJS68562.1| hypothetical protein ICY_04764 [Bacillus cereus BAG2X1-3]
Length = 476
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MEAIWDSTEEGAYKAFKKFFSSKLVSYSEGRDFPDQNVHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L +H L NK +R +K S QL+WREF Y P N P
Sbjct: 247 LMFHYLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFENFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
WD E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WDKEEELLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|354568677|ref|ZP_08987840.1| deoxyribodipyrimidine photo-lyase, 8-HDF type [Fischerella sp.
JSC-11]
gi|353539931|gb|EHC09411.1| deoxyribodipyrimidine photo-lyase, 8-HDF type [Fischerella sp.
JSC-11]
Length = 480
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 122/272 (44%), Gaps = 17/272 (6%)
Query: 46 PAEAPVTPLLVRQATTPLRDDHDEKYGV---PTLEELGF--DIEGLLPPTWKGGETEAMR 100
P PV L + T + + GV P+ ++LGF D E ++ P GE A
Sbjct: 161 PKAEPVATLENAEGLTEKEKEIAKSAGVIALPSAKDLGFVWDGELIIAP----GEQAAQE 216
Query: 101 RLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA 160
RLE +R + + + P + + LS L+FG + R + ++++ +
Sbjct: 217 RLEEFCDRA--INEYQEQRNFP--AVDGTSRLSAALKFGAIGIRRVWQATQQVWENSRSE 272
Query: 161 PPPLSL---HGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGF 217
++ +L WREF+ A P PW++N E W +TG+
Sbjct: 273 ETQSNIRTWQQELAWREFYQHAMYNFPELAAGAYRDAFKNFPWEINHEHFQAWCEGKTGY 332
Query: 218 PWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMW 277
P +DA M Q+ E GW+H+ R VA FLT+ DL ++ + G + F + L+D D S N G W
Sbjct: 333 PIVDAAMRQMNEIGWMHNRCRMIVASFLTK-DLLINPQMGERYFMQKLIDGDLSANNGGW 391
Query: 278 MWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W + S + + P +K DP ++I
Sbjct: 392 QWSASSGMDPKPVRIFNPASQAQKFDPEAEYI 423
>gi|428314222|ref|YP_007125199.1| deoxyribodipyrimidine photolyase [Microcoleus sp. PCC 7113]
gi|428255834|gb|AFZ21793.1| deoxyribodipyrimidine photolyase [Microcoleus sp. PCC 7113]
Length = 478
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 117/269 (43%), Gaps = 17/269 (6%)
Query: 49 APVTPLLVRQATTPLRDDHDEKYG---VPTLEELGF--DIEGLLPPTWKGGETEAMRRLE 103
APV L + TP + ++ G +PT ++LGF D E L P GE A +L
Sbjct: 163 APVDTLHQAEGLTPEEQETAQQAGAIALPTAKDLGFVWDNELLTQP----GEEAAQAKLA 218
Query: 104 RHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPP 163
+ + + P + + LS L+FG + R + K +
Sbjct: 219 EFSTHA--ITEYEEQRNFP--AIKGTSELSAALKFGAIGIRTVWAATIAALKNSRSDETQ 274
Query: 164 LSLHG---QLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWI 220
S+ +L WREF+ A P PWD N + W +TG+P +
Sbjct: 275 ASIQAWQKELAWREFYQHALYHFPELADGPYRDTFKDFPWDNNPQLFQAWCEGKTGYPIV 334
Query: 221 DAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL 280
DA M QL GW+H+ R VA FLT+ DL ++W+ G K F + L DAD S N G W W
Sbjct: 335 DAAMRQLNTLGWMHNRCRMIVASFLTK-DLLINWQWGEKYFLQKLYDADLSANNGGWQWS 393
Query: 281 SCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ S + + P +K DP G++I
Sbjct: 394 ASSGMDPKPLRIFNPASQAKKFDPEGEYI 422
>gi|374851431|dbj|BAL54391.1| deoxyribodipyrimidine photo-lyase [uncultured gamma
proteobacterium]
Length = 491
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 114/224 (50%), Gaps = 18/224 (8%)
Query: 90 TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHD 149
TW+ GE A+ RLE R +A + + P L + + LSP L FG +S +
Sbjct: 204 TWRPGEAGALARLEAF--RSGPLAEYASLRDRPD--LPATSRLSPHLHFGEISPKQVAAS 259
Query: 150 LNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQI---PWDVNMEA 206
+ + + +L+WREF + +F ++ G P+ + PW V +A
Sbjct: 260 I------LASGHSGEAFLRELIWREFSHHLLY---HFPKLPGQPLDQRFHAFPWRVAKDA 310
Query: 207 LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLL 266
LA W QTG P +DA M +L GW+H+ R A FL + +L +SW+EG + F + L+
Sbjct: 311 LAAWQQGQTGIPLVDAGMRELWATGWMHNRIRMVAASFLVK-NLLISWQEGARWFWDTLV 369
Query: 267 DADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
DAD + N+ W W++ C + FF + PV GRK DP G++I
Sbjct: 370 DADLANNSQNWQWVAGCGADAAPFFRIFNPVLQGRKFDPLGNYI 413
>gi|330502050|ref|YP_004378919.1| deoxyribodipyrimidine photo-lyase type I [Pseudomonas mendocina
NK-01]
gi|328916336|gb|AEB57167.1| deoxyribodipyrimidine photo-lyase type I [Pseudomonas mendocina
NK-01]
Length = 478
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 135/300 (45%), Gaps = 27/300 (9%)
Query: 19 IIEKNGGKTPLTYHQFQSIV-AKMDSPSPA----EAPVTPLLVRQATTPLRDDHDEKYGV 73
++ ++GG + Y QF+ + ++ S PA TP+ V+ P D + +
Sbjct: 139 VLTRSGGYFQV-YSQFRKVCYERLHSALPALVTQPKAQTPMDVKSDIIP---DSVKGFAT 194
Query: 74 PTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLS 133
P+ E L W GE A++RLER + + VA + + P SQ LS
Sbjct: 195 PS-ESLRL--------LWPAGEQAALQRLERFADEQ--VAFYKDERDFPAKPGTSQ--LS 241
Query: 134 PFLRFGCLSTRLFYHD-LNKLYKRIKKAPPP-LSLHGQLLWREFFYCAATRNPNFDRMLG 191
+L G LS R H L+ ++ +LLWREF+ P R
Sbjct: 242 AYLAAGILSPRQCLHAALSANRGEFDSGNQGVITWINELLWREFYKHILVGYPRVSRHRA 301
Query: 192 -NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
P +PW E LA W +TG P IDA M QL E GW+H+ R VA FLT+ +L
Sbjct: 302 FRPETEAVPWRNAPEELAAWQEGRTGLPIIDAAMRQLLETGWMHNRLRMIVAMFLTK-NL 360
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ W EG + F L+D D + N G W W S + +F + P+ +K DP+G FI
Sbjct: 361 LIDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDAAPYFRIFNPISQSQKFDPDGQFI 420
>gi|95929775|ref|ZP_01312516.1| Deoxyribodipyrimidine photolyase [Desulfuromonas acetoxidans DSM
684]
gi|95134071|gb|EAT15729.1| Deoxyribodipyrimidine photolyase [Desulfuromonas acetoxidans DSM
684]
Length = 475
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 130/287 (45%), Gaps = 29/287 (10%)
Query: 27 TPLTYHQFQSIVAKMDSPSPAE---APVTPL-LVRQATTPLRDDHDEKYGVPTLEELGFD 82
TP H S+ + P PAE A VTP ++ A LR +H + L
Sbjct: 150 TPFYRHARDSVPVRSPLPRPAEIALAAVTPYSALKLADLELRPNH--PWADKVLHH---- 203
Query: 83 IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLS 142
W+ GE A +R + +E + + +G + P S+ LSP + +G +S
Sbjct: 204 --------WQPGEAGAQQRWQTFMEEE--LLGYGEGRDLPAQPHVSR--LSPAIHWGEIS 251
Query: 143 TRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDV 202
+HD + L+ QL WREF +P+ DR+ + PW
Sbjct: 252 VHQLWHDAQAIGHEDA-----LAFQRQLAWREFSVTQLFHHPDMDRINLDRRFNLFPWHD 306
Query: 203 NMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFD 262
+ E L +W TG P++DA M +L + G +H+ R V FL + +L + W G F
Sbjct: 307 DAEKLNRWQQGLTGIPFVDAGMRELWQTGTMHNRVRMVVGSFLVK-NLGIHWHHGAAWFW 365
Query: 263 ELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDF 308
+ LLDAD + N+ W W++ C + +F + PV G+K DP+GD+
Sbjct: 366 DCLLDADLANNSASWQWIAGCGADAAPYFRIFNPVTQGQKFDPHGDY 412
>gi|262277239|ref|ZP_06055032.1| deoxyribodipyrimidine photo-lyase [alpha proteobacterium HIMB114]
gi|262224342|gb|EEY74801.1| deoxyribodipyrimidine photo-lyase [alpha proteobacterium HIMB114]
Length = 470
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 111/246 (45%), Gaps = 36/246 (14%)
Query: 83 IEGLLPPT---------WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLS 133
IE +LP W GE A+++++ K + + + + P + + LS
Sbjct: 182 IETILPKKKWYEKFEKYWFPGEDIALKKIKSFNSEK--INFYDKNRDFPS--IEGTSKLS 237
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNP--------- 184
P L FG +S + Y + K+ K ++ WREF Y P
Sbjct: 238 PHLAFGEISPKKIYDECTKIKN---KKIGVTKFLNEIGWREFAYHLINHFPIMLKKNLRK 294
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
NFD+ PW N + L KW TG+P +DA M QL E GW+H+ R V F
Sbjct: 295 NFDKF---------PWSENKKFLDKWKKGNTGYPIVDAAMKQLYETGWMHNRLRMVVGSF 345
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKAD 303
L + L ++W EG K F + LLD D + N W W++ C + +F + P+ G K D
Sbjct: 346 LVKH-LRINWTEGEKYFKDTLLDYDTANNVSGWQWIAGCGADAAPYFRIFNPITQGEKFD 404
Query: 304 PNGDFI 309
PNG+F+
Sbjct: 405 PNGEFV 410
>gi|218437085|ref|YP_002375414.1| deoxyribodipyrimidine photo-lyase [Cyanothece sp. PCC 7424]
gi|218169813|gb|ACK68546.1| Deoxyribodipyrimidine photo-lyase [Cyanothece sp. PCC 7424]
Length = 475
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 10/240 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+PT ++LG+ E P GET A RL+ K + ++ + P + + L
Sbjct: 190 LPTAKDLGYLWEN--PLMLNPGETAAKERLQEFC--KTSINNYQEQRDLP--AIDGTSRL 243
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNFDRM 189
S L+FG + R + +LY+ + S+ +L WREF+ P
Sbjct: 244 SAALKFGAIGIRTVWQATLELYENSRSDEVRESIQTWQQELAWREFYQHCMYFFPELADG 303
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
+ PWD + + W +TG+P +DA M QL E GW+H+ R VA FLT+ D
Sbjct: 304 PYRKEFREFPWDNDEDLFQAWCEGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFLTK-D 362
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L ++W+ G K F + L D D S N G W W + S + + P +K DP+G++I
Sbjct: 363 LIINWQWGEKYFMQKLYDGDLSANNGGWQWSASSGMDPKPLRIFNPASQSQKYDPDGEYI 422
>gi|428208935|ref|YP_007093288.1| deoxyribodipyrimidine photo-lyase type I [Chroococcidiopsis
thermalis PCC 7203]
gi|428010856|gb|AFY89419.1| deoxyribodipyrimidine photo-lyase type I [Chroococcidiopsis
thermalis PCC 7203]
Length = 477
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 13/273 (4%)
Query: 43 SPSPAEAPVTPLLVRQATTPLRDDHDEKYG---VPTLEELGFDIEGLLPPTWKGGETEAM 99
S P AP L + + EK G +PT ++LGF+ E L + GET A
Sbjct: 158 SSKPKAAPAQALQDVEGLSEQELQTAEKVGAIALPTAKDLGFNWENGL--VIEPGETPAR 215
Query: 100 RRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK 159
RLE+ R + + + P SQ LS L+FG + R + + + +
Sbjct: 216 ERLEQFCHRA--IEEYKEQRNFPAYDGTSQ--LSAALKFGAIGIRRVWAATVEAMENTRS 271
Query: 160 APPPLSLHG---QLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTG 216
S+ +L WREF+ A P ++ P++ N E W +TG
Sbjct: 272 DEAQTSIRAWQQELAWREFYQHAMYHFPELEQGAYRQQFKNFPYENNEEYFQAWCEGRTG 331
Query: 217 FPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGM 276
+P +DA M Q+ GW+H+ R VA FLT+ DL + G K F + L+D D S N G
Sbjct: 332 YPIVDAAMRQMNNIGWMHNRCRMIVANFLTK-DLLIDPRLGEKYFYQRLIDGDLSANNGG 390
Query: 277 WMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W W + S + + P +K DP+G++I
Sbjct: 391 WQWSASSGMDPKPIRIFNPASQAQKFDPDGEYI 423
>gi|428220832|ref|YP_007105002.1| deoxyribodipyrimidine photolyase [Synechococcus sp. PCC 7502]
gi|427994172|gb|AFY72867.1| deoxyribodipyrimidine photolyase [Synechococcus sp. PCC 7502]
Length = 481
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 137/314 (43%), Gaps = 26/314 (8%)
Query: 9 LTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHD 68
L ++L + + I K+ G+ Y F PSP P L ++ D
Sbjct: 129 LDIALHAPQAIATKSTGEPYKVYSPFWKNWITQPKPSPLPKPQKLLGLKNC------DGL 182
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
+ +P+L ELGF +P + GE A + L + + + ++ + + P +
Sbjct: 183 DAIPLPSLAELGFSHNQTIPAS---GEEIAQKLLTEFCDSQK-LYNYKKDRDFP--AIDG 236
Query: 129 QTGLSPFLRFGCLSTR---------LFYHDLNKLYKRIKKAPPPL----SLHGQLLWREF 175
+ LSP LRFG + R + + + ++ ++ L + +L WREF
Sbjct: 237 TSNLSPHLRFGTIGIRDCWAATVAVMIDAEADITSEQDQRNAQKLEGIQTWRQELAWREF 296
Query: 176 FYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHH 235
+ P + P + WD N E W+N +TG+P +DA M QL + GW+H+
Sbjct: 297 YQHVLFHFPQLSQSAYRPQMQRFAWDQNHEYFQAWSNGRTGYPIVDAAMRQLNQTGWMHN 356
Query: 236 LARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCP 295
R VA FLT+ DL ++W+ G F + L+D D + N G W W + S Q + P
Sbjct: 357 RCRMIVASFLTK-DLILNWQWGELYFMQKLIDGDLAANNGGWQWSASSGMDTQPLRIFNP 415
Query: 296 VKFGRKADPNGDFI 309
K DP G +I
Sbjct: 416 SSQALKFDPEGTYI 429
>gi|172039222|ref|YP_001805723.1| DNA photolyase [Cyanothece sp. ATCC 51142]
gi|354552505|ref|ZP_08971813.1| cryptochrome, DASH family [Cyanothece sp. ATCC 51472]
gi|171700676|gb|ACB53657.1| DNA photolyase [Cyanothece sp. ATCC 51142]
gi|353555827|gb|EHC25215.1| cryptochrome, DASH family [Cyanothece sp. ATCC 51472]
Length = 491
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 148/325 (45%), Gaps = 27/325 (8%)
Query: 2 SSSIEKKLTLSLPSSRRIIEKNGGKT-------PLTYHQFQSIVAKMDSPSPAEAPVTPL 54
+++EK++ +L + ++ G T P +Q + + V P
Sbjct: 117 ETTVEKEVKQALKPLKVKVQGFWGSTLYHWDDLPFEVNQLPEVFTSFRKKVEKSSTVNPT 176
Query: 55 LVRQATTPLR---DDHDEKYGVPTLEELG-----FDIEGLLPPTWKGGETEAMRRLERHL 106
L+ TP++ + E +PTLEELG + G+L +KGGET ++RL+ +
Sbjct: 177 LI----TPIKLLPFPNIELGKIPTLEELGLEKPDYHSRGML--NFKGGETGGIKRLKEYF 230
Query: 107 ERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPL 164
+ + + K T +L + + SP+L GCLS R Y ++ K K
Sbjct: 231 WERNCLKEY---KETRNGMLGADYSSKFSPWLAQGCLSPRYIYEEVQKYEDARVKNNSTY 287
Query: 165 SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIM 224
L +LLWR++F ++ N + IPW + E W ++TG+P +DA M
Sbjct: 288 WLIFELLWRDYFRFICAKHGNKIFYESGLQGLDIPWKEDKERFKLWQESKTGYPLVDANM 347
Query: 225 TQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSS 284
++ G++ + R VA FLT+ +L ++W G + F+ LL+D D N G W + +
Sbjct: 348 REIAATGFMSNRGRQNVASFLTK-NLGINWIMGAEWFESLLIDYDVCSNYGNWNYTAGVG 406
Query: 285 FFQQFFHCYCPVKFGRKADPNGDFI 309
+ F + K + DP GD++
Sbjct: 407 NDARGFRYFNIPKQSKDYDPKGDYL 431
>gi|255022161|ref|ZP_05294164.1| Deoxyribodipyrimidine photolyase [Acidithiobacillus caldus ATCC
51756]
gi|340782929|ref|YP_004749536.1| Deoxyribodipyrimidine photolyase [Acidithiobacillus caldus SM-1]
gi|254968425|gb|EET25984.1| Deoxyribodipyrimidine photolyase [Acidithiobacillus caldus ATCC
51756]
gi|340557080|gb|AEK58834.1| Deoxyribodipyrimidine photolyase [Acidithiobacillus caldus SM-1]
Length = 476
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 113/226 (50%), Gaps = 17/226 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W+ GE A RRL ++ +A + + P S+ LSP+L G +S R + L
Sbjct: 199 WEVGEEAAWRRLRDFVDEG--LAHYAEGRNLPGKPFVSR--LSPYLAHGEISPRQIWWHL 254
Query: 151 NKL------YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNM 204
++L ++R A +L WREF + P+ R P + PW +
Sbjct: 255 SRLAEEQGAWRRNVDA-----FLRELGWREFSWHLLYHFPDLPREPLRPEFQRFPWRQDP 309
Query: 205 EALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDEL 264
AL W A+TG+P IDA M +L E GW+H+ R VA FL + DL + W+EG F +
Sbjct: 310 AALRAWTRARTGYPIIDAGMRELWESGWMHNRVRMIVASFLVK-DLRIPWQEGEAWFWDT 368
Query: 265 LLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L+DAD + N+ W W++ C + +F + PV +K DP GD++
Sbjct: 369 LVDADLANNSASWQWVAGCGADAAPYFRVFNPVLQAQKFDPQGDYV 414
>gi|425901487|ref|ZP_18878078.1| deoxyribodipyrimidine photolyase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397883811|gb|EJL00298.1| deoxyribodipyrimidine photolyase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 481
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 104/223 (46%), Gaps = 9/223 (4%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GET A +RL R E A + + + P SQ LSP+L G LS R H
Sbjct: 202 WPAGETAAQQRLARFAE--AQLDHYQAERDLPARPGTSQ--LSPYLAAGVLSPRQCLHAA 257
Query: 151 --NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNMEAL 207
N + +P ++ +LLWREF+ P R P + W E L
Sbjct: 258 LQNNRGEFASGSPGAVTWINELLWREFYKHILVGYPRVSRHRAFRPETEAVAWRDAPEEL 317
Query: 208 AKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLD 267
A W A+TG P IDA M QL E GW+H+ R VA FLT+ +L + W +G + F L+D
Sbjct: 318 AAWQQARTGLPIIDAAMRQLLETGWMHNRLRMIVAMFLTK-NLLIDWRQGERFFMRHLID 376
Query: 268 ADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
D + N G W W S + +F + P+ ++ D G FI
Sbjct: 377 GDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSQRFDSQGAFI 419
>gi|257868228|ref|ZP_05647881.1| deoxyribodipyrimidine photo-lyase type I [Enterococcus
casseliflavus EC30]
gi|257874499|ref|ZP_05654152.1| deoxyribodipyrimidine photo-lyase type I [Enterococcus
casseliflavus EC10]
gi|257802342|gb|EEV31214.1| deoxyribodipyrimidine photo-lyase type I [Enterococcus
casseliflavus EC30]
gi|257808663|gb|EEV37485.1| deoxyribodipyrimidine photo-lyase type I [Enterococcus
casseliflavus EC10]
Length = 469
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 109/217 (50%), Gaps = 10/217 (4%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE A ++L+ ++++ +A++ + + P + + LSPFL FG +S R + ++
Sbjct: 202 GEDYAHKQLQAFVQKR--LAAYEKDRDIPS--IKGTSRLSPFLSFGQISIRKVWAACQEM 257
Query: 154 YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
KA + +L WR+F++ +P + W + EAL KW
Sbjct: 258 PSSTGKA----TFLKELAWRDFYHMIYFTHPEQKNYELIEKYRNMDWQKDEEALNKWQAG 313
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
QTG+P IDA M QL + GW+H+ R VA FLT+ DL + W +G F L+D D + N
Sbjct: 314 QTGYPIIDAAMRQLNQTGWMHNRLRMIVASFLTK-DLLIDWRQGEAYFARQLIDYDAASN 372
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + P+ G+K D +G FI
Sbjct: 373 IGGWQWAASTGTDAVPYFRIFNPITQGKKFDKDGTFI 409
>gi|448729676|ref|ZP_21711991.1| deoxyribodipyrimidine photolyase [Halococcus saccharolyticus DSM
5350]
gi|445794978|gb|EMA45516.1| deoxyribodipyrimidine photolyase [Halococcus saccharolyticus DSM
5350]
Length = 466
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 112/242 (46%), Gaps = 13/242 (5%)
Query: 73 VPTLEELGFDI-EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
+P L++LGF+ + LPP G A RL+R E + + + P S+
Sbjct: 175 LPALDDLGFEEPDATLPP---AGTEAARERLDRFCESP--IFEYDEEREYPARGGTSR-- 227
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNFDR 188
LS L++G + R + S+ +L WREF+ NPN
Sbjct: 228 LSQDLKYGTIGIREVTERTAAALDDAENEDERESVETYREELAWREFYTQVTYYNPNVVT 287
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
QI W + E LA W +TG+P +DA M QLREE ++H+ R VA FLT+
Sbjct: 288 RNYKDYENQIEWREDAEDLAAWKAGETGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK- 346
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G F E L+D D + + G W W S + Q +F + P+ G + DP+ +
Sbjct: 347 DLLLDWRAGYDHFRERLVDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDAE 406
Query: 308 FI 309
+I
Sbjct: 407 YI 408
>gi|354611090|ref|ZP_09029046.1| Deoxyribodipyrimidine photo-lyase [Halobacterium sp. DL1]
gi|353195910|gb|EHB61412.1| Deoxyribodipyrimidine photo-lyase [Halobacterium sp. DL1]
Length = 467
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 105/241 (43%), Gaps = 11/241 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+P LGF+ P G A RLE ER V + + P S+ L
Sbjct: 175 LPDAATLGFEEPDAEIPA--AGTDAARERLEAFCERD--VFRYEDARDYPAERATSR--L 228
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRM 189
S L+FG L R Y + S+ GQL WREF+ NP
Sbjct: 229 SADLKFGTLGVRELYERTEQAMTDADDDDERASVEEFQGQLAWREFYAQVLYFNPEVVTE 288
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
I W + L W + +TG+P +DA M QLR+E ++H+ R VA FLT+ D
Sbjct: 289 NFKEYAQPIEWRDDPTELRAWKDGETGYPIVDAGMRQLRDEAYVHNRVRMLVAAFLTK-D 347
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
L V W EG F E L+D D + + G W W S + Q +F + P G + DP+ +F
Sbjct: 348 LLVDWREGYAHFREHLVDHDTANDTGGWQWAASTGTDAQPYFRVFNPTTQGERYDPDAEF 407
Query: 309 I 309
+
Sbjct: 408 V 408
>gi|145300128|ref|YP_001142969.1| deoxyribodipyrimidine photolyase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418357828|ref|ZP_12960518.1| deoxyribodipyrimidine photolyase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142852900|gb|ABO91221.1| deoxyribodipyrimidine photolyase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356689067|gb|EHI53615.1| deoxyribodipyrimidine photolyase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 473
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 103/225 (45%), Gaps = 9/225 (4%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P W GE EA RRL LE V + + P A + LSP+L G +S R
Sbjct: 201 PRWPVGEAEAQRRLHAFLEPA--VLDYEETRDFPAQ--AGTSILSPYLAAGIISPRQCVG 256
Query: 149 DLNKL--YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNME 205
L + ++ KA P +L+WREF+ P L P +PW +
Sbjct: 257 VLQQRLGHRPQSKAQPGFVWLNELVWREFYRHLLVLVPTLSMNLPFKPETATLPWSWDPV 316
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
A A W +TG+P +DA M L GW+H+ R VA FLT+ DL + W G F L
Sbjct: 317 AFAAWCEGRTGYPIVDAAMRCLHATGWMHNRLRMIVASFLTK-DLHIHWRLGEDYFMSQL 375
Query: 266 LDADWSVNAGMWMWLSCSSF-FQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W + + +F + P G++ DP GDFI
Sbjct: 376 IDGDLAANNGGWQWAAGTGADAAPYFRVFNPTTQGQRFDPQGDFI 420
>gi|343497166|ref|ZP_08735244.1| deoxyribodipyrimidine photolyase [Vibrio nigripulchritudo ATCC
27043]
gi|342819829|gb|EGU54664.1| deoxyribodipyrimidine photolyase [Vibrio nigripulchritudo ATCC
27043]
Length = 479
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 12/187 (6%)
Query: 132 LSPFLRFGCLS-----TRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
LSP+L GCLS RL Y + ++L + + +L+WREF+ P
Sbjct: 244 LSPYLALGCLSPRQCIARLTYQENDRLKNFDELNEGEQTWLSELIWREFYQHLLEFEPKL 303
Query: 187 DRMLGNPIC---VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
+ G P + + W + + L +W N +TG+P +DA M QL + GW+H+ R VA
Sbjct: 304 SK--GLPFVDWSIDLEWHNDEDWLTRWKNGETGYPIVDAAMRQLNQTGWMHNRLRMVVAS 361
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKA 302
FLT+ DL + W +G F L+D D++ N G W W S Q +F + P+ G K
Sbjct: 362 FLTK-DLLIDWRKGEDYFMSKLIDGDYAANNGGWQWSASTGCDGQPYFRIFNPISQGEKF 420
Query: 303 DPNGDFI 309
D G+FI
Sbjct: 421 DAQGEFI 427
>gi|228953466|ref|ZP_04115511.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|423425266|ref|ZP_17402297.1| hypothetical protein IE5_02955 [Bacillus cereus BAG3X2-2]
gi|423506140|ref|ZP_17482730.1| hypothetical protein IG1_03704 [Bacillus cereus HD73]
gi|449089482|ref|YP_007421923.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228806205|gb|EEM52779.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|401112481|gb|EJQ20359.1| hypothetical protein IE5_02955 [Bacillus cereus BAG3X2-2]
gi|402449071|gb|EJV80909.1| hypothetical protein IG1_03704 [Bacillus cereus HD73]
gi|449023239|gb|AGE78402.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 476
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MEAIWEPTEEGAYKTFKKFFSSKLASYSEGRDFPNQNVHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NKLYKRIKK--APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWD 201
L +H L NK +R S QL+WREF Y P N PW+
Sbjct: 247 LMFHYLINKSTERQSSLFEKQVNSFIRQLIWREFSYYLLYHYPFTVYKPLNKSFEHFPWN 306
Query: 202 VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F
Sbjct: 307 KEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWF 365
Query: 262 DELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 366 MDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|452207964|ref|YP_007488086.1| deoxyribodipyrimidine photolyase [Natronomonas moolapensis 8.8.11]
gi|452084064|emb|CCQ37397.1| deoxyribodipyrimidine photolyase [Natronomonas moolapensis 8.8.11]
Length = 466
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 24/248 (9%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
+PTL +LGFD P G A LE L+ + + + P S+
Sbjct: 174 AIPTLSDLGFDAPAAEVPA--AGTDVARTLLESFLDDDVY--RYEESRDYPAEECTSR-- 227
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS---------LHGQLLWREFFYCAATR 182
LS L+FG + R ++ KR++ A S QL WREF+
Sbjct: 228 LSVHLKFGTIGIR-------EVDKRVRDALESASGERRESVAEFRSQLAWREFYTHVLYF 280
Query: 183 NPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
NP+ I W+ + + LA W +TG+P +DA M QLR EG++H+ R VA
Sbjct: 281 NPDVVTTNYTSYENPIEWENDDDLLAAWKRGETGYPIVDAGMRQLRAEGFMHNRVRMIVA 340
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRK 301
FLT+ DL + W G + F +LL+D D + + G W W S + Q +F + P+ G +
Sbjct: 341 SFLTK-DLLIDWRHGYEHFRDLLVDHDTANDNGGWQWAASTGTDSQPYFRIFNPMTQGER 399
Query: 302 ADPNGDFI 309
DP+ +I
Sbjct: 400 YDPDAAYI 407
>gi|47564301|ref|ZP_00235346.1| deoxyribodipyrimidine photolyase classI [Bacillus cereus G9241]
gi|47558453|gb|EAL16776.1| deoxyribodipyrimidine photolyase classI [Bacillus cereus G9241]
Length = 476
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W E A + ++ K S GR P S+LA P+L FG +S +L +H
Sbjct: 197 WNPTEEGAYKTFKKFFSSKLTFYSEGRDFPNQNVHSMLA------PYLSFGQISVKLMFH 250
Query: 149 DL-NKLYKRIKK--APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNME 205
L NK +R S QL+WREF Y P N PWD E
Sbjct: 251 YLINKSTERQSSLFEKQVNSFIRQLIWREFSYYLLYHYPFTVYKPLNKNFEHFPWDKEEE 310
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F + L
Sbjct: 311 LLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMDTL 369
Query: 266 LDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 370 LDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 414
>gi|114570041|ref|YP_756721.1| deoxyribodipyrimidine photo-lyase type I [Maricaulis maris MCS10]
gi|114340503|gb|ABI65783.1| deoxyribodipyrimidine photo-lyase type I [Maricaulis maris MCS10]
Length = 499
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 108/225 (48%), Gaps = 16/225 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W+ GE A+ RLE L + +A + + + P S+ LSP L +G +S R +H +
Sbjct: 208 WEPGEDGALNRLEAFLANE--LADYPQSRDRPDEDGTSR--LSPHLAWGEISPRTIWHTV 263
Query: 151 NKLYKRIKKAPPPLSLHGQLLWREF-----FYCAATRNPNFDRMLGNPICVQIPWDVNME 205
+R +L WR+F + + R+ NF+R + PW N
Sbjct: 264 RDHAERGGSFQGGEKFLSELGWRDFAIYLAHHFGSLRDENFNRQFDH-----FPWRSNPA 318
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
L W QTG P +DA M QL GW+H+ R A FL + L V W +GM F++ L
Sbjct: 319 GLDAWKRGQTGIPIVDAGMRQLWTTGWMHNRVRMITASFLIK-HLGVHWRDGMAWFEDTL 377
Query: 266 LDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
+DAD +VNA W W++ S +F + PV G + DP G ++
Sbjct: 378 VDADLNVNAASWQWVAGSGADAAPYFRIFNPVTQGERFDPQGLYV 422
>gi|386052851|ref|YP_005970409.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes Finland
1998]
gi|346645502|gb|AEO38127.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes Finland
1998]
Length = 467
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 105/225 (46%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL ++ +A + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDSGEKTANTRLANFIKHD--IADYDKARDFPE--LDKTSHLSRYLRTGEISIRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A + +L WR+F+ PN PI I W+ N E
Sbjct: 245 ALQETEATEGRA----TFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W + +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKAWQDGKTGFPLVDAAMRQLKETGWMHNRLRMVTASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K DP G FI
Sbjct: 357 IDYDSASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTGKFI 401
>gi|409405685|ref|ZP_11254147.1| deoxyribodipyrimidine photolyase [Herbaspirillum sp. GW103]
gi|386434234|gb|EIJ47059.1| deoxyribodipyrimidine photolyase [Herbaspirillum sp. GW103]
Length = 497
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 121/273 (44%), Gaps = 24/273 (8%)
Query: 44 PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGF---DIEGLLPPTWKGGETEAMR 100
P P E L A TP +G+P+ E LGF +++ L PT G EA+
Sbjct: 177 PYPVEKYFKALARPAAKTP--------HGLPSHEALGFRPSNLDELKIPTGMSG-AEAL- 226
Query: 101 RLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA 160
LE L R + ++G + P + + LS LRFG +S R + + A
Sbjct: 227 -LEDFLGR---IGAYGTARDFPA--VKGPSYLSIHLRFGTVSIRTLARAAMQAMHAGQGA 280
Query: 161 PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEA---LAKWANAQTGF 217
+L WR+F++ +P P I W+ A A W +TG+
Sbjct: 281 AGAAVWLSELTWRDFYFMILHHHPRVTDQAFKPEYDAIRWEQGQHAEELFAAWCEGRTGY 340
Query: 218 PWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMW 277
P +DA M Q+ + G++H+ R VA FLT+ DL + W G K F L D D S N G W
Sbjct: 341 PLVDAAMAQINQTGYMHNRLRMVVASFLTK-DLGIDWRRGEKYFARHLNDFDLSANNGGW 399
Query: 278 MWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
W S S Q +F + PV K DP+G FI
Sbjct: 400 QWASSSGCDAQPYFRIFNPVTQSEKFDPDGKFI 432
>gi|390437938|ref|ZP_10226447.1| Deoxyribodipyrimidine photo-lyase [Microcystis sp. T1-4]
gi|389838649|emb|CCI30571.1| Deoxyribodipyrimidine photo-lyase [Microcystis sp. T1-4]
Length = 474
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 109/244 (44%), Gaps = 10/244 (4%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
E +PTLE LGF + LP T GE A RLE + + ++ + P
Sbjct: 183 ETINLPTLENLGFTWQNPLPLT--PGEKAATSRLEEFCQ--GVINNYQEDRNFP--AFDG 236
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPN 185
+ LS L+FG + R + +L + + S+ +L WREF+ P
Sbjct: 237 TSRLSAALKFGAIGIRTIWTATLELLENCRAEEAKNSIITWQQELAWREFYQHCLYFFPE 296
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
PW N E W +TG+P +DA M QL E GW+H+ R VA FL
Sbjct: 297 LAVGAYRKEFRHFPWQDNEEHFQAWCQGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFL 356
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
T+ DL ++W++G K F + L D D + N G W W + S + + P +K D
Sbjct: 357 TK-DLIINWQKGEKYFMQKLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQTQKFDLE 415
Query: 306 GDFI 309
G++I
Sbjct: 416 GEYI 419
>gi|410944062|ref|ZP_11375803.1| deoxyribodipyrimidine photolyase [Gluconobacter frateurii NBRC
101659]
Length = 483
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 129/294 (43%), Gaps = 18/294 (6%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGV--PTLE 77
++ G+ + F D P P +P PL D +Y + TL
Sbjct: 146 VQTKEGRFYQVFTTFWKAFQAQDVPEPLGSPANLSFY-----PLSDSLLAQYWLDESTLL 200
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
D L +W+ GE EA LE + GR +++ + + LSP+L
Sbjct: 201 PTHPDWAAGLRASWEPGEKEAHEHLEDFVRHDCSRYGKGRDELSREGT----SRLSPYLA 256
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF-DRMLGNPICV 196
G +S R + L K + A LS ++ WREF D LG
Sbjct: 257 SGAISPRQIWAALQKKGAHDEGARIFLS---EIGWREFAKYTLFHQARLPDTSLGQKF-E 312
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
++PW + + L W +TG P +DA M QL + GW+H+ AR V FLT+ L + W E
Sbjct: 313 KMPWRKSEKDLLAWQQGRTGVPIVDAGMRQLWKTGWMHNRARMIVGSFLTK-HLLIDWRE 371
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
G F + L+DADW+ NA W W++ + FF + P + G K DP+GD+I
Sbjct: 372 GEAWFRDTLVDADWASNAMNWQWVAGTGIDASPFFRIFNPTRQGVKFDPDGDYI 425
>gi|404450368|ref|ZP_11015352.1| DASH family cryptochrome [Indibacter alkaliphilus LW1]
gi|403764104|gb|EJZ25020.1| DASH family cryptochrome [Indibacter alkaliphilus LW1]
Length = 473
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 9/242 (3%)
Query: 73 VPTLEELGFDIEGLLPPT---WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ 129
+P+L+ G + P + ++GGE E +RRL+ + + + + K T LL +
Sbjct: 188 IPSLKSFGLEKPDADPRSVLVFEGGEEEGLRRLQTYFWKNDCLKDY---KQTRNGLLGAD 244
Query: 130 --TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFD 187
+ SP+L GCLS R Y ++ K K +KK L +L+WR++F A ++ N
Sbjct: 245 YSSKFSPWLALGCLSPRYIYEEIQKYEKAVKKNQSTYWLIFELIWRDYFRFIAKKHGNRI 304
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
LG W N + WAN +TG P++DA M +L G++ + R VA FL
Sbjct: 305 FQLGGIKSNVDKWLRNEDLFWIWANGKTGIPFVDANMRELNTTGFMSNRGRQNVASFLV- 363
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G F+ L+D D N G WM+++ + + ++ + D GD
Sbjct: 364 NDLGIDWRWGAAYFESQLIDYDVCSNWGNWMYVAGVGNDPRENRYFNILRQAQNYDKKGD 423
Query: 308 FI 309
++
Sbjct: 424 YV 425
>gi|282897058|ref|ZP_06305060.1| DNA photolyase, FAD-binding [Raphidiopsis brookii D9]
gi|281197710|gb|EFA72604.1| DNA photolyase, FAD-binding [Raphidiopsis brookii D9]
Length = 479
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 139/314 (44%), Gaps = 22/314 (7%)
Query: 4 SIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL 63
++EK L S I+ +G +TP T + + K P P+ L + T
Sbjct: 124 TLEKNWDQLLHSPETIL--SGTRTPYTVY---TPFWKKWHSQPKLEPIEILANCENLTAR 178
Query: 64 RDDHDEKYGV---PTLEELGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRP 118
++ EK GV PT +LGF D E +L P GE A RL L+ + +
Sbjct: 179 EEEIAEKSGVIKLPTARDLGFIWDGELILEP----GEVAAWERLTDFLD--CAIDEYEEK 232
Query: 119 KMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLY---KRIKKAPPPLSLHGQLLWREF 175
+ P + + LSP L+FG + R + +L + + ++ +L WREF
Sbjct: 233 RNYPA--IDGTSLLSPALKFGVIGIRTIWQKTQELLAISNSQEFSNGIITWQKELAWREF 290
Query: 176 FYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHH 235
+ A P + PW N + W +TG+P +DA M QL E GW+H+
Sbjct: 291 YQHAMYHFPELAEGAYRDVFKNFPWSDNQDHFQSWCEGKTGYPIVDAAMRQLNETGWMHN 350
Query: 236 LARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCP 295
R VA FLT+ DL ++ + G K F + L+D D S N G W W + S + + P
Sbjct: 351 RCRMIVASFLTK-DLIINPQWGEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPLRIFNP 409
Query: 296 VKFGRKADPNGDFI 309
+K D +G++I
Sbjct: 410 SSQAQKFDGDGEYI 423
>gi|421852148|ref|ZP_16284838.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371479515|dbj|GAB30041.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 473
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 102/225 (45%), Gaps = 6/225 (2%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLF 146
LPP W GE A L R +E +A + + + + LSP++R G +S R
Sbjct: 203 LPPGWTSGEKAAHANLHRFIENA--LADYETQRDRADAPHGTSL-LSPYIRVGQISVRQI 259
Query: 147 YHDLNKL-YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNME 205
+H + ++ A +L WR+F + P+ +PW +
Sbjct: 260 WHAIRHAEHQNPHLATAAEKFLAELGWRDFAWMQMFTTPDLATRNLRAEFDHMPWRADAA 319
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
LA W QTGFP +DA M QL GW+H+ R VA FLT+ L W EG + F L
Sbjct: 320 DLAAWQQGQTGFPLVDAGMRQLARTGWMHNRVRMVVASFLTK-HLLTDWREGERWFYAQL 378
Query: 266 LDADWSVNAGMWMWLSCSSF-FQQFFHCYCPVKFGRKADPNGDFI 309
LDAD +VNA W W + + +F + PV K DP G +I
Sbjct: 379 LDADAAVNAMNWQWGAGTGIDAAPWFRIFNPVGQSEKYDPAGQYI 423
>gi|167570597|ref|ZP_02363471.1| deoxyribodipyrimidine photolyase [Burkholderia oklahomensis C6786]
Length = 486
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 76 LEELGF-----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
L+ LG D G L TW GE A RRL ++ + + GR + P + AS +
Sbjct: 192 LDALGLAPARPDWAGGLRETWTCGEDAAHRRLRAFVDSRLGGYATGRDR--PGA--ASTS 247
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPL-SLHGQLLWREFFYCAATRNPNFDRM 189
LSPF+RFG LS R +H + L + +L WREF Y R P+ R
Sbjct: 248 RLSPFVRFGNLSVRQVWHAAVDAHAHGAATQADLDTFCRELGWREFCYGQLYRFPDLARR 307
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
+PW + ALA W TG+P++DA M +L GW+H+ AR A FL +
Sbjct: 308 NLRHNLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRARMVCASFLVK-H 366
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDF 308
L + W EG F + L+DAD + NA W W++ C + +F + P+ G+K DP+G +
Sbjct: 367 LLIDWREGDAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPIAQGKKFDPDGAY 426
Query: 309 I 309
+
Sbjct: 427 V 427
>gi|302864753|ref|YP_003833390.1| deoxyribodipyrimidine photo-lyase [Micromonospora aurantiaca ATCC
27029]
gi|302567612|gb|ADL43814.1| Deoxyribodipyrimidine photo-lyase [Micromonospora aurantiaca ATCC
27029]
Length = 440
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 107/227 (47%), Gaps = 18/227 (7%)
Query: 84 EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG-LSPFLRFGCLS 142
+G P GGET A RRL AW+ + R + +T LSP+LRFGC+S
Sbjct: 185 KGDSPDAAVGGETVARRRL------TAWLPTLDRYDDIHDDMAGDETSRLSPYLRFGCVS 238
Query: 143 TRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDV 202
+ R P QL WR+F++ P+ + + W
Sbjct: 239 P-------LAVANRAGDRDGPFVR--QLCWRDFYHQVVAGFPDLS-TVAYRRGAREDWRD 288
Query: 203 NMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFD 262
+ A WA +TG P +DA M QLR EGW+H+ AR A +LT+ L + W G++IF
Sbjct: 289 DPHAFDAWAEGRTGMPIVDAGMRQLRAEGWMHNRARLITAGYLTK-HLGLDWRPGLEIFF 347
Query: 263 ELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LLD D N+G W W++ + + + + PV+ + DP+G ++
Sbjct: 348 RWLLDGDRVNNSGNWQWVAGTGNDTRPYRGFNPVRQAERYDPDGAYV 394
>gi|229075148|ref|ZP_04208142.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock4-18]
gi|228707925|gb|EEL60104.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock4-18]
Length = 476
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 111/227 (48%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W E A + ++ K S GR P S+LA P+L FG +S +L +H
Sbjct: 197 WDPTEEGAYKTFKKFFSSKLVSYSEGRDFPNQNVHSMLA------PYLSFGQISVKLMFH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PWD
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFENFPWDKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F +
Sbjct: 309 EELLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|448381750|ref|ZP_21561726.1| deoxyribodipyrimidine photolyase [Haloterrigena thermotolerans DSM
11522]
gi|445662831|gb|ELZ15594.1| deoxyribodipyrimidine photolyase [Haloterrigena thermotolerans DSM
11522]
Length = 468
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 114/247 (46%), Gaps = 23/247 (9%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM---TPQSLLASQ 129
+PTL +LGFD PPT T A R WVA F + + ++
Sbjct: 176 IPTLSDLGFDEPEATPPTVT---TAAARE---------WVADFCSGPIYDYADRRDYPAE 223
Query: 130 TG---LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRN 183
+G LSP L++G + R Y + +R + S+ QL WREF+ N
Sbjct: 224 SGTSRLSPQLKWGTIGPRELYVATERAAERAESDDDRESVREFQRQLAWREFYAHVLAFN 283
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P + I W + +AL W +TG P +DA M QL+ EGW+H+ R VA
Sbjct: 284 PETVTEDFSGYENDIEWRDDPDALEAWRAGETGCPIVDAGMRQLQAEGWMHNRVRMLVAS 343
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKA 302
FLT+ DL + W G F L D D + + G W W S + Q +F + P+K GR+
Sbjct: 344 FLTK-DLLLDWRAGYDWFRRKLADHDTANDVGGWQWAASTGTDAQPYFRVFNPMKQGREY 402
Query: 303 DPNGDFI 309
DP+ ++I
Sbjct: 403 DPDAEYI 409
>gi|97047702|sp|Q4KML2.2|CRYD_DANRE RecName: Full=Cryptochrome DASH; AltName: Full=Protein CRY-DASH;
Short=zCRY-DASH
Length = 520
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 131/292 (44%), Gaps = 20/292 (6%)
Query: 25 GKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGF--- 81
G P Y QF+ V P + TP V+ + L E+ +PT + LG
Sbjct: 153 GGLPDVYTQFRKAVEAQGRVRPVLS--TPEQVKSPPSGL-----EEGPIPTFDSLGQTEP 205
Query: 82 --DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLR 137
D P +GGETEA+ RL+ + VA++ K T ++ T SP+L
Sbjct: 206 LDDCRSAFP--CRGGETEALARLKHYFWDTNAVATY---KETRNGMIGVDFSTKFSPWLA 260
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
GC+S R Y + K + +LLWR++F A + N +
Sbjct: 261 LGCISPRYIYEQIKKYEVERTANQSTYWVIFELLWRDYFKFVALKYGNRIFYMNGLQDKH 320
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
+PW+ +M+ W +TG P++DA M +L G++ + R VA FLT+ DL + W G
Sbjct: 321 VPWNTDMKMFDAWKEGRTGVPFVDANMRELALTGFMSNRGRQNVASFLTK-DLGLDWRLG 379
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ F+ LL+D D N G W++ + + + +K G D NGD++
Sbjct: 380 AEWFEYLLVDHDVCSNYGNWLYSAGIGNDPRENRKFNMIKQGLDYDNNGDYV 431
>gi|68534519|gb|AAH98514.1| Cryptochrome DASH [Danio rerio]
Length = 520
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 131/292 (44%), Gaps = 20/292 (6%)
Query: 25 GKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGF--- 81
G P Y QF+ V P + TP V+ + L E+ +PT + LG
Sbjct: 153 GGLPDVYTQFRKAVEAQGRVRPVLS--TPEQVKSPPSGL-----EEGPIPTFDSLGQTEP 205
Query: 82 --DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLR 137
D P +GGETEA+ RL+ + VA++ K T ++ T SP+L
Sbjct: 206 LDDCRSAFP--CRGGETEALARLKHYFWDTNAVATY---KETRNGMIGVDFSTKFSPWLA 260
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
GC+S R Y + K + +LLWR++F A + N +
Sbjct: 261 LGCISPRYIYEQIKKYEVERTANQSTYWVIFELLWRDYFKFVALKYGNRIFYMNGLQDKH 320
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
+PW+ +M+ W +TG P++DA M +L G++ + R VA FLT+ DL + W G
Sbjct: 321 VPWNTDMKMFDAWKEGRTGVPFVDANMRELALTGFMSNRGRQNVASFLTK-DLGLDWRLG 379
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ F+ LL+D D N G W++ + + + +K G D NGD++
Sbjct: 380 AEWFEYLLVDHDVCSNYGNWLYSAGIGNDPRENRKFNMIKQGLDYDNNGDYV 431
>gi|428218359|ref|YP_007102824.1| deoxyribodipyrimidine photo-lyase [Pseudanabaena sp. PCC 7367]
gi|427990141|gb|AFY70396.1| Deoxyribodipyrimidine photo-lyase [Pseudanabaena sp. PCC 7367]
Length = 489
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 132/305 (43%), Gaps = 15/305 (4%)
Query: 9 LTLSLPSSRRIIEKNGGKTPLTYHQF-QSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
L L P + I N G Y F +S +AK P P +P + + T+ R
Sbjct: 141 LALHAPDA---ISTNSGTPYKVYTPFWRSWIAKA-KPQPLPSPAKLVGLDGRTSESRSIE 196
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+ +P L +LGF + +P G A + L+ + + ++ + + P +
Sbjct: 197 AKAIALPRLADLGFSCDQDIP---TAGIKAAEQCLQDFCDTNK-IFNYQQERNFPANPGT 252
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNP 184
S LSP LRFG + R + + I+ L +L WREF+ P
Sbjct: 253 SM--LSPHLRFGTIGIRQVWQATVAATEHIRSDEEKAGLQTWRQELAWREFYQHVLFHFP 310
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ WD + A W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 311 DLATGAYRSQMQVFEWDDDEAKFAAWCKGETGYPIVDAAMRQLNQTGWMHNRCRMIVASF 370
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADP 304
LT+ DL ++W+ G + F E L+D D + N G W W + S + + P RK D
Sbjct: 371 LTK-DLIINWQWGERYFMEKLVDGDQAANNGGWQWSASSGMDPKPLRIFNPASQARKYDK 429
Query: 305 NGDFI 309
+G++I
Sbjct: 430 DGEYI 434
>gi|423655980|ref|ZP_17631279.1| hypothetical protein IKG_02968 [Bacillus cereus VD200]
gi|401292211|gb|EJR97875.1| hypothetical protein IKG_02968 [Bacillus cereus VD200]
Length = 476
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 111/227 (48%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W E A + ++ K S GR P S+LA P+L FG +S +L +H
Sbjct: 197 WDPTEEGAYKTFKKFFSSKLVSYSEGRDFPGQNVHSMLA------PYLSFGQISVKLMFH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PWD
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFENFPWDKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F +
Sbjct: 309 EELLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|427429184|ref|ZP_18919220.1| Deoxyribodipyrimidine photolyase [Caenispirillum salinarum AK4]
gi|425880864|gb|EKV29558.1| Deoxyribodipyrimidine photolyase [Caenispirillum salinarum AK4]
Length = 481
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 107/229 (46%), Gaps = 9/229 (3%)
Query: 82 DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCL 141
D G L +W GE A L ++ +A + + P + S+ LSP LRFG +
Sbjct: 205 DWAGGLRESWTPGEDGAWACLHTFIDGA--LARYRTGRNLPAEVGTSR--LSPHLRFGEI 260
Query: 142 STRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWD 201
S R ++ + + + LS ++ WREF NP+ R P PW
Sbjct: 261 SARQVWNAVRSMAEPNASTDAYLS---EIGWREFNRYQLFHNPDLHRTPLRPEFRLFPWR 317
Query: 202 VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
+ + W TG+P +DA M +L E GW+H+ R V FL + DL W+ G F
Sbjct: 318 EDDADIRAWRKGLTGYPIVDAGMRELWETGWMHNRVRMIVGSFLVK-DLLAPWQVGEAWF 376
Query: 262 DELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ L+DADW N G W W++ C + FF + PV G K DP GD++
Sbjct: 377 WDTLVDADWGSNPGNWQWVAGCGADAAPFFRVFNPVLQGEKFDPRGDYV 425
>gi|421851103|ref|ZP_16284024.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus NBRC
101655]
gi|371458034|dbj|GAB29227.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus NBRC
101655]
Length = 473
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 102/225 (45%), Gaps = 6/225 (2%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLF 146
LP W GE A L R +E +A + + + + LSP++R G +S R
Sbjct: 203 LPSGWTSGEKAAHANLHRFIENA--LADYETQRDRADAPHGTSL-LSPYIRVGQISVRQI 259
Query: 147 YHDLNKL-YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNME 205
+H + ++ A P +L WR+F + P+ +PW +
Sbjct: 260 WHAIRHAEHQNPHLATPAEKFLAELGWRDFAWMQMFTTPDLATRNLRAEFDHMPWRADAA 319
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
LA W QTGFP +DA M QL GW+H+ R VA FLT+ L W EG + F L
Sbjct: 320 DLAAWQQGQTGFPLVDAGMRQLARTGWMHNRVRMVVASFLTK-HLLTDWREGERWFYAQL 378
Query: 266 LDADWSVNAGMWMWLSCSSF-FQQFFHCYCPVKFGRKADPNGDFI 309
LDAD +VNA W W + + +F + PV K DP G +I
Sbjct: 379 LDADAAVNAMNWQWGAGTGIDAAPWFRIFNPVGQSEKYDPAGQYI 423
>gi|218898230|ref|YP_002446641.1| deoxyribodipyrimidine photolyase [Bacillus cereus G9842]
gi|218544312|gb|ACK96706.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
G9842]
Length = 476
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 111/227 (48%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W+ E A + ++ K S GR P S+LA P+L FG +S +L YH
Sbjct: 197 WEPTEEGAYKTFKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVKLMYH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PW+
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKNFEHFPWNKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ R AVA FL + L + W+EG K F +
Sbjct: 309 EELLRVWQKGETGYPFIDAGMRELWQTGFMHNRTRMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|282899861|ref|ZP_06307822.1| DNA photolyase, FAD-binding [Cylindrospermopsis raciborskii CS-505]
gi|281195131|gb|EFA70067.1| DNA photolyase, FAD-binding [Cylindrospermopsis raciborskii CS-505]
Length = 484
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 121/272 (44%), Gaps = 17/272 (6%)
Query: 46 PAEAPVTPLLVRQATTPLRDDHDEKYGV---PTLEELGFDIEG--LLPPTWKGGETEAMR 100
P P+ L + T ++ EK GV PT +LGF G +L P GE A
Sbjct: 166 PKVEPIEILANCENLTAREEEIAEKSGVIKLPTARDLGFIWSGELILEP----GEVAAWE 221
Query: 101 RLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLY---KRI 157
RL L+ + + + P + + LSP L+FG + R + +L
Sbjct: 222 RLTDFLD--CAIDEYEEKRNYPA--IDGTSLLSPALKFGVIGIRTIWQKTQELLAISNSQ 277
Query: 158 KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGF 217
+ + ++ +L WREF+ A P + PW N E W +TG+
Sbjct: 278 EFSNGIITWQKELAWREFYQHAMYHFPELAEGAYRDVFKNFPWSDNQEHFQAWCEGKTGY 337
Query: 218 PWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMW 277
P +DA M QL E GW+H+ R VA FLT+ DL ++ + G K F + L+D D S N G W
Sbjct: 338 PIVDAAMRQLNETGWMHNRCRMIVASFLTK-DLIINPQWGEKYFMQKLIDGDLSANNGGW 396
Query: 278 MWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W + S + + P +K D +G++I
Sbjct: 397 QWSASSGMDPKPLRIFNPSSQAQKFDSDGEYI 428
>gi|75763261|ref|ZP_00743014.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74489251|gb|EAO52714.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 478
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 111/227 (48%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W+ E A + ++ K S GR P S+LA P+L FG +S +L YH
Sbjct: 199 WEPTEEGAYKTFKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVKLMYH 252
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PW+
Sbjct: 253 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKNFEHFPWNKE 310
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ R AVA FL + L + W+EG K F +
Sbjct: 311 EELLRVWQKGETGYPFIDAGMRELWQTGFMHNRTRMAVASFLVK-HLLIPWQEGAKWFMD 369
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 370 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 416
>gi|229522729|ref|ZP_04412145.1| deoxyribodipyrimidine photolyase [Vibrio cholerae TM 11079-80]
gi|229340714|gb|EEO05720.1| deoxyribodipyrimidine photolyase [Vibrio cholerae TM 11079-80]
Length = 469
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 91/185 (49%), Gaps = 9/185 (4%)
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH---GQLLWREFFYCAATRNPNF 186
+ LSP+L G LS R + +LY P +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSAR---QCVARLYHESSMGEPSEGAQVWLSELIWREFYQHLVAIEPNL 293
Query: 187 DRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
+ L ++ W + E W +TG+P +DA M QL + GW+H+ R VA FL
Sbjct: 294 SKSLDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFL 353
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADP 304
T+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K DP
Sbjct: 354 TK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDP 412
Query: 305 NGDFI 309
NGDFI
Sbjct: 413 NGDFI 417
>gi|434376106|ref|YP_006610750.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis HD-789]
gi|401874663|gb|AFQ26830.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis HD-789]
Length = 476
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 115/235 (48%), Gaps = 21/235 (8%)
Query: 83 IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGC 140
IE + PT +G A + ++ K S GR P S+LA P+L FG
Sbjct: 193 IESIWEPTEEG----AYKTFKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQ 242
Query: 141 LSTRLFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
+S +L YH L NK +R +K S QL+WREF Y P N
Sbjct: 243 ISVKLMYHYLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKNF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W +TG+P+IDA M +L + G++H+ R AVA FL + L + W+
Sbjct: 301 EHFPWNKEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRTRMAVASFLVK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 360 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|292657024|ref|YP_003536921.1| deoxyribodipyrimidine photolyase [Haloferax volcanii DS2]
gi|448293624|ref|ZP_21483728.1| deoxyribodipyrimidine photolyase [Haloferax volcanii DS2]
gi|291372710|gb|ADE04937.1| deoxyribodipyrimidine photolyase [Haloferax volcanii DS2]
gi|445569955|gb|ELY24522.1| deoxyribodipyrimidine photolyase [Haloferax volcanii DS2]
Length = 484
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 126/302 (41%), Gaps = 19/302 (6%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT--TPLRD--DHDEKY---- 71
I N G T Y F D P P P LV AT + D + D ++
Sbjct: 132 ITTNAGDTYSVYTYFWKKWRDRDKPDPYPEPDADDLVDAATLESAAEDLTNGDAEFDIAV 191
Query: 72 -GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
G+PT+ +LGF E G A RL + + R T + +
Sbjct: 192 GGLPTISDLGF--EEPSASVQPAGTEAARERLSAFCADAIYRYADDRDYPTRDAT----S 245
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDR 188
LS L+FG + R Y + + ++ QL WREF+ +PN
Sbjct: 246 RLSTDLKFGTIGIREVYAATAAAREGVGGERDESVEEFQSQLAWREFYAHVLRGHPNVVT 305
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
I W + E LA W +TG+P +DA M QLREE ++H+ R VA FLT+
Sbjct: 306 ENYKEYEEDIAWRDDDEELAAWKAGETGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK- 364
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL W G F E L D D + + G W W S + Q +F + P+ G + DP+G+
Sbjct: 365 DLLCDWRHGYAHFREHLADHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDGE 424
Query: 308 FI 309
+I
Sbjct: 425 YI 426
>gi|257877829|ref|ZP_05657482.1| deoxyribodipyrimidine photo-lyase type I [Enterococcus
casseliflavus EC20]
gi|257811995|gb|EEV40815.1| deoxyribodipyrimidine photo-lyase type I [Enterococcus
casseliflavus EC20]
Length = 473
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 10/217 (4%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE A ++L+ ++++ +A++ + + P + + LSPFL FG +S R + +
Sbjct: 206 GEDYAHKQLQAFVQKR--LAAYEKDRDIPS--IKGTSRLSPFLSFGQISIRKVWAACQGM 261
Query: 154 YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
KA + +L WR+F++ +P + W N E L KW
Sbjct: 262 PSSTGKA----TFLKELAWRDFYHMIYFSHPEQKNYELIEKYRNMDWRKNEEELTKWQAG 317
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
QTG+P IDA M QL + GW+H+ R VA FLT+ DL + W +G F L+D D + N
Sbjct: 318 QTGYPIIDAAMRQLNQTGWMHNRLRMIVASFLTK-DLLIDWRQGEAYFARQLIDYDAASN 376
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + P+ G+K D +G FI
Sbjct: 377 IGGWQWAASTGTDAVPYFRIFNPITQGKKFDKDGTFI 413
>gi|288958781|ref|YP_003449122.1| deoxyribodipyrimidine photo-lyase [Azospirillum sp. B510]
gi|288911089|dbj|BAI72578.1| deoxyribodipyrimidine photo-lyase [Azospirillum sp. B510]
Length = 504
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 113/251 (45%), Gaps = 19/251 (7%)
Query: 73 VPTLEELGFDIEGL-LPPT-----------WKGGETEAMRRLERHLERKAWVASFGRPKM 120
P G +EG LPPT W GET A+ L L+ V + R +
Sbjct: 193 APATAPAGDALEGWGLPPTAPDWAAGLRKRWVPGETAALSHLADFLDGPVGVYATERDRP 252
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH-GQLLWREFFYCA 179
+ LSP L FG + R +H + + + ++ WREF Y
Sbjct: 253 DRHG----TSTLSPHLAFGEIGPRQVWHAARHAAEARPELAAGIDFFLREVGWREFQYHL 308
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
P +P PW + L W +TG+P +DA M QL E GW+H+ R
Sbjct: 309 LHHAPELPERPLDPRFADFPWREDAAGLQAWRRGRTGYPIVDAGMRQLWETGWMHNRVRM 368
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKF 298
VA FL + DL + W+EG + F + L+DAD + NAG W W++ C + FF + PV
Sbjct: 369 IVASFLVK-DLLLPWQEGERWFWDTLVDADLAQNAGNWQWVAGCGADAAPFFRVFNPVLQ 427
Query: 299 GRKADPNGDFI 309
G K DP+GD++
Sbjct: 428 GEKFDPDGDYV 438
>gi|420263503|ref|ZP_14766140.1| deoxyribodipyrimidine photolyase [Enterococcus sp. C1]
gi|394769460|gb|EJF49316.1| deoxyribodipyrimidine photolyase [Enterococcus sp. C1]
Length = 473
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 16/220 (7%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE A ++L+ ++++ +A++ + + P + + LSPFL FG LS R K+
Sbjct: 206 GEDYAHKQLQAFVQKR--LAAYEKDRDLPS--IKGTSRLSPFLSFGQLSIR-------KV 254
Query: 154 YKRIKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
+ + PP + +L WR+F++ +P + W + EA KW
Sbjct: 255 WAACQGMPPSTGKATFLKELAWRDFYHMIYFTHPEQKNYELIEKYRNMDWQKDEEAFNKW 314
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
QTG+P IDA M QL + GW+H+ R VA FLT+ DL + W +G F L+D D
Sbjct: 315 QAGQTGYPIIDAAMRQLNQTGWMHNRLRMIVASFLTK-DLLIDWRQGEAYFARQLIDYDA 373
Query: 271 SVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G W W S + +F + P+ G+K D G FI
Sbjct: 374 ASNIGGWQWAASTGTDAVPYFRIFNPITQGKKFDKEGTFI 413
>gi|228959394|ref|ZP_04121085.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|423628269|ref|ZP_17604018.1| hypothetical protein IK5_01121 [Bacillus cereus VD154]
gi|228800294|gb|EEM47220.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|401270133|gb|EJR76158.1| hypothetical protein IK5_01121 [Bacillus cereus VD154]
Length = 476
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 111/227 (48%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W E A + ++ K S GR P S+LA P+L FG +S +L +H
Sbjct: 197 WDPTEEGAYKTFKKFFSSKLVSYSEGRDFPGQNVHSMLA------PYLSFGQISVKLMFH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PWD
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFENFPWDKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F +
Sbjct: 309 EELLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|425464194|ref|ZP_18843516.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9809]
gi|389833855|emb|CCI21283.1| Deoxyribodipyrimidine photo-lyase [Microcystis aeruginosa PCC 9809]
Length = 474
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 109/244 (44%), Gaps = 10/244 (4%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
E +PTLE LGF + LP GE A RLE + + ++ + P
Sbjct: 183 ETINLPTLENLGFTWQNPLPLA--PGEKAAHSRLEEFCQ--GVINNYQEDRNFP--AFDG 236
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRI---KKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LS L+FG + R + +L + + ++ +L WREF+ P
Sbjct: 237 TSRLSAALKFGAIGIRTIWTATLELLENCCAQEAKDSIITWQQELAWREFYQHCLYFFPE 296
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
PW N E W +TG+P +DA M QL E GW+H+ R VA FL
Sbjct: 297 LAVGAYRKEFRHFPWQDNEEHFQAWCQGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFL 356
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
T+ DL ++W++G K F + L D D + N G W W + S + + P +K DP
Sbjct: 357 TK-DLIINWQKGEKYFMQKLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQTQKFDPE 415
Query: 306 GDFI 309
G++I
Sbjct: 416 GEYI 419
>gi|159898493|ref|YP_001544740.1| deoxyribodipyrimidine photo-lyase [Herpetosiphon aurantiacus DSM
785]
gi|159891532|gb|ABX04612.1| Deoxyribodipyrimidine photo-lyase [Herpetosiphon aurantiacus DSM
785]
Length = 486
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 128/288 (44%), Gaps = 26/288 (9%)
Query: 27 TPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGL 86
+ L YHQ + +V +PS AP + L A+ P +P+L +LGF+++
Sbjct: 157 SELAYHQAEQLVP---APSKFVAPPSDL----ASLP----------IPSLADLGFELQQT 199
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLF 146
+P + GET A +RL + +R+ ++ K A + LS LR G +S R
Sbjct: 200 IP---QVGETIAQQRLAQFFDRRQKLSVLKYTKAREVPAEAGTSQLSVDLRMGTISIRQC 256
Query: 147 YHDLNKLYKRIKKAPPPLSLH---GQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L A + +L WR+++ NP +P QI W +
Sbjct: 257 LKQAVDLLTEPLNAEQRQGVDTWLKELAWRDYYTQLIYHNPYMLNGSLDPRYDQIIWRND 316
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
W QTG+P +DA QL + W+H+ R A FL + DL + W G + F +
Sbjct: 317 PSEFLAWQQGQTGYPIVDAGQRQLNQMAWMHNRVRMISASFLIK-DLLIDWRWGERYFMQ 375
Query: 264 LLLDADWSVNAGMWMWLSCSS--FFQQFFHCYCPVKFGRKADPNGDFI 309
L D D + N G W W + SS Q +F + P+ +K DP+G +I
Sbjct: 376 QLCDGDPTANNGGWQWAAGSSGPSAQPYFRIFNPIAQSKKHDPDGQYI 423
>gi|449669082|ref|XP_002166544.2| PREDICTED: cryptochrome DASH-like [Hydra magnipapillata]
Length = 526
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 19/250 (7%)
Query: 73 VPTLEELGFD-------IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSL 125
VP L ELGFD + + P + G E +A++RL +L + + ++ K T L
Sbjct: 200 VPLLNELGFDKNEYEIDVRSVFP--FNGSEVDAVKRLNEYLWGNSAILTY---KETRNGL 254
Query: 126 LASQ--TGLSPFLRFGCLSTRLFYHDLNKL--YKRIKKAPPPLSLHGQLLWREFF--YCA 179
L T SP+L G LS R+ YH + K+IK+ + +L+WR++F C+
Sbjct: 255 LGKDYSTKFSPWLALGSLSPRMIYHKIKDFEEQKKIKENDSTYWVVFELIWRDYFKFICS 314
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
N F + W ++ KWAN TG P++DA M +L GW+ + R
Sbjct: 315 KHGNKVFFKGGLKGGKGPWTWKQDLNLFMKWANGDTGIPFVDANMKELLATGWMSNRGRQ 374
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFG 299
VA FL + DL + W G + F+ LL+D+D N G W +++ + + +K
Sbjct: 375 NVASFLVK-DLNLDWRMGAEWFESLLIDSDVCSNYGNWNYIAGIGNDPRSNRKFNVIKQA 433
Query: 300 RKADPNGDFI 309
D GD++
Sbjct: 434 ADYDEEGDYV 443
>gi|228966105|ref|ZP_04127168.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402559511|ref|YP_006602235.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis HD-771]
gi|423359850|ref|ZP_17337353.1| hypothetical protein IC1_01830 [Bacillus cereus VD022]
gi|228793590|gb|EEM41130.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|401083011|gb|EJP91275.1| hypothetical protein IC1_01830 [Bacillus cereus VD022]
gi|401788163|gb|AFQ14202.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis HD-771]
Length = 476
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 111/227 (48%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W+ E A + ++ K S GR P S+LA P+L FG +S +L YH
Sbjct: 197 WEPTEEGAYKTFKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVKLMYH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PW+
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKNFEHFPWNKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ R AVA FL + L + W+EG K F +
Sbjct: 309 EELLRVWQKGETGYPFIDAGMRELWQTGFMHNRTRMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|329904543|ref|ZP_08273850.1| Deoxyribodipyrimidine photolyase [Oxalobacteraceae bacterium
IMCC9480]
gi|327547937|gb|EGF32686.1| Deoxyribodipyrimidine photolyase [Oxalobacteraceae bacterium
IMCC9480]
Length = 504
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 118/264 (44%), Gaps = 16/264 (6%)
Query: 50 PVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERK 109
PV PL R A +P+ + +PTL ELGF G + + ++ +ER
Sbjct: 182 PVEPLADRFAVSPV------AHVMPTLAELGFAPTNFAQLKIPTGMSGGQQLVDNFMER- 234
Query: 110 AWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQ 169
+ + + + P + + LS LRFG +S R + + A + +
Sbjct: 235 --IDKYKQTRDFPA--IKGPSYLSVHLRFGTVSIRHLARRACEAARIAADASGANTWLAE 290
Query: 170 LLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALA---KWANAQTGFPWIDAIMTQ 226
L+WR+F++ +P P I W+ A A W + +TG+P +DA M Q
Sbjct: 291 LVWRDFYFMILQHHPRVVHGAFKPDYDAIQWETGPAADALFQAWCDGRTGYPLVDAAMAQ 350
Query: 227 LREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFF 286
+ + G++H+ R ACFL + DL + W G F E L+D D S N G W W S S
Sbjct: 351 INQTGYMHNRLRMVTACFLIK-DLGIDWRRGEAYFAEKLIDFDLSANNGGWQWASSSGCD 409
Query: 287 QQ-FFHCYCPVKFGRKADPNGDFI 309
Q +F + P+ K D +G FI
Sbjct: 410 AQPYFRIFNPITQSEKFDTDGRFI 433
>gi|304321394|ref|YP_003855037.1| blue light photoreceptor cryptochrome [Parvularcula bermudensis
HTCC2503]
gi|303300296|gb|ADM09895.1| blue light photoreceptor cryptochrome [Parvularcula bermudensis
HTCC2503]
Length = 478
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 130/296 (43%), Gaps = 20/296 (6%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEEL 79
IE G Y + + + + P A P T L + P D D+ +P
Sbjct: 138 IETKSGDPYKVYTPYWKSLQQKEGPR-AALPRTDKLNAPPSLPSTDRLDDWNLLPRSPNW 196
Query: 80 GFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFG 139
E P W GE A RL L+ A AS+ + P S+ LSP L FG
Sbjct: 197 AEGFE----PVWTPGEKGARARLRAWLDTDA--ASYDDCRNRPDQDRTSR--LSPHLHFG 248
Query: 140 CLSTRLFYHDLNKLYK--RIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC-- 195
+S + +H ++ + I K S ++ WREF Y +P M P+
Sbjct: 249 EISPVVLWHSVSDAMEAGDIPKDQG-TSFLSEIAWREFSYQLLYYHPT---MRDQPLMEK 304
Query: 196 -VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
WD + +AL W +TG+P +DA M QL EGW+H+ R V FL + DL + W
Sbjct: 305 FTDFEWDTDKKALNAWQRGRTGYPIVDAGMRQLWTEGWMHNRVRMIVGSFLVK-DLLLDW 363
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+GM+ F + L+DAD + N W W++ C + FF + P K DP+G +I
Sbjct: 364 RDGMRWFWDCLVDADPANNTASWQWIAGCGADAAPFFRIFNPTTQSEKFDPDGAYI 419
>gi|453074873|ref|ZP_21977663.1| deoxyribodipyrimidine photo-lyase [Rhodococcus triatomae BKS 15-14]
gi|452763822|gb|EME22097.1| deoxyribodipyrimidine photo-lyase [Rhodococcus triatomae BKS 15-14]
Length = 446
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 108/234 (46%), Gaps = 19/234 (8%)
Query: 83 IEGL-LPPTWKGGETEAMRRLE--RHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFG 139
+EGL PP + GE A+RR R E + RP + S L SP+L+FG
Sbjct: 177 VEGLDGPPLPRAGEAAALRRWREFRDDELAGYADGRDRPDLDATSRL------SPYLKFG 230
Query: 140 CLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
C+ R D+ + +L +L WR+F+ P+ R + ++
Sbjct: 231 CIHPRTVLRDIAD-----RTDAGATTLRSELAWRDFYADVLHHRPDTARGNVDHRFDELV 285
Query: 200 WDVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
D +A WA +TGFP +DA M QL EGW+H+ R VA FLT+ DL + W
Sbjct: 286 HDSGPDADRAFEAWAQGRTGFPIVDAGMRQLLAEGWMHNRVRMIVASFLTK-DLHLPWWR 344
Query: 257 GMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G + F L+D D + N W W + C + +F + P G K DP GD++
Sbjct: 345 GARHFMRHLVDGDLASNQHGWQWTAGCGTDAAPYFRVFNPTVQGEKFDPAGDYV 398
>gi|422408691|ref|ZP_16485652.1| deoxyribodipyrimidine photo-lyase, partial [Listeria monocytogenes
FSL F2-208]
gi|313610351|gb|EFR85579.1| deoxyribodipyrimidine photo-lyase [Listeria monocytogenes FSL
F2-208]
Length = 467
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 105/225 (46%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL + K +A + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDSGERAANTRLANFI--KHDIADYDKARDFPE--LDKTSHLSRYLRTGEISIRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A + +L WR+F+ PN PI I W+ N E
Sbjct: 245 ALQETEATEGRA----TFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKAWQEGETGFPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K DP G+FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTGEFI 401
>gi|229145749|ref|ZP_04274130.1| Deoxyribodipyrimidine photolyase [Bacillus cereus BDRD-ST24]
gi|296503680|ref|YP_003665380.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis BMB171]
gi|228637730|gb|EEK94179.1| Deoxyribodipyrimidine photolyase [Bacillus cereus BDRD-ST24]
gi|296324732|gb|ADH07660.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis BMB171]
Length = 476
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 111/227 (48%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W E A + ++ K S GR P S+LA P+L FG +S +L +H
Sbjct: 197 WDPTEEGAYKTFKKFFSSKLVSYSEGRDFPGQNVHSMLA------PYLSFGQISVKLMFH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PWD
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFENFPWDKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F +
Sbjct: 309 EELLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|298490155|ref|YP_003720332.1| deoxyribodipyrimidine photo-lyase ['Nostoc azollae' 0708]
gi|298232073|gb|ADI63209.1| Deoxyribodipyrimidine photo-lyase ['Nostoc azollae' 0708]
Length = 479
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 128/295 (43%), Gaps = 20/295 (6%)
Query: 23 NGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG---VPTLEEL 79
+G KTP T + + K S P PV L + T + ++ G +P+ ++L
Sbjct: 141 SGSKTPYTVY---TPFWKNWSSKPKANPVATLKNSEGLTAAEQEIAKQSGAINLPSAQDL 197
Query: 80 GF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
GF D E ++ P GE A RLE + + + P SQ LS L+
Sbjct: 198 GFIWDGELIIEP----GEAVAKARLETFTTSA--INEYQEQRNFPTVHGTSQ--LSAALK 249
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRMLGNPI 194
FG + R + +L + S+ + WREF+ A P I
Sbjct: 250 FGVIGIRTIWQATKELLETSNSEEVTASIRTWQQEFAWREFYQHAMYHFPALANGAYRDI 309
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
+ PW N W +TG+P +DA M QL E GW+H+ R VA FLT+ DL ++
Sbjct: 310 FKKFPWQNNQAHFQAWCEGKTGYPIVDAAMRQLNEIGWMHNRCRMIVASFLTK-DLIINP 368
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ G K F + L+D D S N G W W + S + + P +K D +G++I
Sbjct: 369 QWGEKYFMQKLIDGDLSANNGGWQWSASSGMDSKPLRIFNPASQAQKFDIDGEYI 423
>gi|336126045|ref|YP_004578001.1| deoxyribodipyrimidine photolyase [Vibrio anguillarum 775]
gi|335343762|gb|AEH35044.1| Deoxyribodipyrimidine photolyase [Vibrio anguillarum 775]
Length = 470
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 3/186 (1%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
L S + LSP+L G LS R L + I + + +++WREF+ P+
Sbjct: 233 LDSTSALSPYLAIGALSARQCMARLYAESQHIGLSEGAQTWLSEIIWREFYQHLIGFRPD 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ P + W N A +W QTGFP +DA M QL + GW+H+ R VA F
Sbjct: 293 LCKGKDFAPWGKHVSWWENSTAFERWQQGQTGFPIVDAAMRQLNKTGWMHNRLRMVVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F + L+D D++ N G W W + + Q +F + P G + D
Sbjct: 353 LTK-DLHIDWRLGEQYFMQTLVDGDYASNNGGWQWCASTGCDGQPYFRIFNPTSQGERFD 411
Query: 304 PNGDFI 309
P GDFI
Sbjct: 412 PKGDFI 417
>gi|300311186|ref|YP_003775278.1| deoxyribodipyrimidine photolyase [Herbaspirillum seropedicae SmR1]
gi|300073971|gb|ADJ63370.1| deoxyribodipyrimidine photolyase (photoreactivation) protein
[Herbaspirillum seropedicae SmR1]
Length = 494
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 117/264 (44%), Gaps = 14/264 (5%)
Query: 50 PVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERK 109
PV L A+ P + H +P+ +LGF L G + A L+ L+R
Sbjct: 179 PVEKYLTALASPPGKAGH----ALPSHRQLGFAPSNLQELKIPTGMSGAQSLLDEFLDR- 233
Query: 110 AWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQ 169
+ S+G + P + + LS LRFG +S R + + A +
Sbjct: 234 --IGSYGAARDFPA--VKGPSYLSVHLRFGTISIRTLARAAMQAMHAGQGAAGAAVWLSE 289
Query: 170 LLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEA---LAKWANAQTGFPWIDAIMTQ 226
L WR+F++ +P R P I W+ +A A W +TG+P +DA M Q
Sbjct: 290 LTWRDFYFMILHHHPRVTRHAFKPEYDAIQWEQGPQAEALFAAWCEGRTGYPLVDAAMAQ 349
Query: 227 LREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFF 286
+ + G++H+ R VA FLT+ DL + W G + F L D D + N G W W S S
Sbjct: 350 INQSGYMHNRLRMVVASFLTK-DLGIDWRWGERYFARHLNDFDLAANNGGWQWASSSGCD 408
Query: 287 QQ-FFHCYCPVKFGRKADPNGDFI 309
Q +F + PV K DP+G FI
Sbjct: 409 AQPYFRIFNPVTQSEKFDPDGKFI 432
>gi|220905687|ref|YP_002480998.1| deoxyribodipyrimidine photo-lyase [Cyanothece sp. PCC 7425]
gi|219862298|gb|ACL42637.1| Deoxyribodipyrimidine photo-lyase [Cyanothece sp. PCC 7425]
Length = 475
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 119/273 (43%), Gaps = 13/273 (4%)
Query: 43 SPSPAEAPVTPLLVRQATTPLRDDHDEKYG---VPTLEELGFDIEGLLPPTWKGGETEAM 99
S P E PV L TP ++ G +PT ++LGF + LP + GET A
Sbjct: 157 SRQPKEPPVPSLATATGLTPTEQQAADQVGAIALPTAKDLGFIWDTPLP--LEPGETAAQ 214
Query: 100 RRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK 159
RLE+ +R + ++ + + P + SQ LS L+FG L R + + +
Sbjct: 215 ERLEQFCQRA--IYAYQQERNFPATTGTSQ--LSAALKFGVLGIRTVWATTQSALESSRS 270
Query: 160 APPPLSLHG---QLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTG 216
S+ +L WREF+ A P PW + W +TG
Sbjct: 271 QEAEDSIQTWQQELAWREFYQHALYWFPALAEGAYRQPFKTFPWQNRPDYFQAWCEGRTG 330
Query: 217 FPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGM 276
+P +DA M Q+ GW+H+ R VA FLT+ DL + G K F + L+D D + N G
Sbjct: 331 YPIVDAAMRQMNTIGWMHNRCRMIVASFLTK-DLLIDPRWGEKYFMQKLVDGDLAANNGG 389
Query: 277 WMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W W + S + + P +K DP D+I
Sbjct: 390 WQWSASSGMDPKPLRIFNPASQSQKFDPEADYI 422
>gi|30021247|ref|NP_832878.1| deoxyribodipyrimidine photolyase [Bacillus cereus ATCC 14579]
gi|229130975|ref|ZP_04259903.1| Deoxyribodipyrimidine photolyase [Bacillus cereus BDRD-Cer4]
gi|29896801|gb|AAP10079.1| Deoxyribodipyrimidine photolyase [Bacillus cereus ATCC 14579]
gi|228652473|gb|EEL08383.1| Deoxyribodipyrimidine photolyase [Bacillus cereus BDRD-Cer4]
Length = 476
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 111/227 (48%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W E A + ++ K S GR P S+LA P+L FG +S +L +H
Sbjct: 197 WDPTEEGAYKTFKKFFSSKLVSYSEGRDFPGQNVHSMLA------PYLSFGQISVKLMFH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PWD
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFENFPWDKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F +
Sbjct: 309 EELLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|186682403|ref|YP_001865599.1| DNA photolyase [Nostoc punctiforme PCC 73102]
gi|186464855|gb|ACC80656.1| DNA photolyase, FAD-binding [Nostoc punctiforme PCC 73102]
Length = 481
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 24/298 (8%)
Query: 22 KNGGKTPLTYHQ--FQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG---VPTL 76
+ GG +P T + +++ + K P PV L + T + + G +P+
Sbjct: 140 RTGGNSPYTVYTPFWKNWITK-----PKANPVETLQNVEGLTEAEQEIAKLSGSLTLPSA 194
Query: 77 EELGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
++LGF D + ++ P GE A RLE + + + + P SQ LS
Sbjct: 195 KDLGFIWDEQLIISP----GEAAAQERLEEFTNKA--ITEYQEQRNFPAVDGTSQ--LSA 246
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRMLG 191
L+FG + R + + + + +++ +L WREF+ A P
Sbjct: 247 ALKFGVIGIRTVWQATIEALENSRSEETAVNIRTWQQELAWREFYQHAMYNFPELADGAF 306
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
PW+ N E W +TG+P +DA M Q+ E GW+H+ R VA FLT+ DL
Sbjct: 307 RDTFKNFPWETNEEHFQAWCEGRTGYPIVDAAMRQMNESGWMHNRCRMIVASFLTK-DLL 365
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++ + G K F + L+D D S N G W W + S + + P +K DP G++I
Sbjct: 366 INPQLGEKYFMKHLIDGDLSANNGGWQWSASSGMDPKPVRIFNPASQTQKFDPEGEYI 423
>gi|359774690|ref|ZP_09278046.1| deoxyribodipyrimidine photo-lyase [Gordonia effusa NBRC 100432]
gi|359308173|dbj|GAB20824.1| deoxyribodipyrimidine photo-lyase [Gordonia effusa NBRC 100432]
Length = 461
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 106/226 (46%), Gaps = 14/226 (6%)
Query: 88 PPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFY 147
P GE A +R +L + S+ + P L + T LS +L+FGCL R
Sbjct: 195 PQLLAAGERAAQKRWRAYLHDD--LDSYSDERDRPD--LDTTTRLSAYLKFGCLHPRTIL 250
Query: 148 HDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEAL 207
HD+ R + +L +L WR+F+ R P+ R N + D A
Sbjct: 251 HDI-----RSRSDENARTLRSELAWRDFYADVLYRRPDTARHNYNKKFDNLRHDSGPHAD 305
Query: 208 AK---WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDEL 264
A W + +TG+P +DA M QL EGW+H+ R VA FLT+ DL + W G + F
Sbjct: 306 AAFEAWCSGRTGYPIVDAGMRQLLAEGWMHNRVRMIVASFLTK-DLHLPWWWGARHFMTY 364
Query: 265 LLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L+D D + N W W + C + +F + P G + DPNGD++
Sbjct: 365 LVDGDLASNQHGWQWTAGCGTDAAPYFRVFNPTGQGERFDPNGDYV 410
>gi|291277653|ref|YP_003495244.1| deoxyribodipyrimidine photo-lyase [Candidatus Rickettsia amblyommii
AaR/Sc]
gi|383327305|ref|YP_005353190.1| deoxyribodipyrimidine photo-lyase [Candidatus Rickettsia amblyommii
str. GAT-30V]
gi|289657737|gb|ADD14598.1| deoxyribodipyrimidine photo-lyase [Candidatus Rickettsia amblyommii
AaR/Sc]
gi|378931931|gb|AFC70437.1| deoxyribodipyrimidine photo-lyase [Candidatus Rickettsia amblyommii
str. GAT-30V]
Length = 478
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 13/185 (7%)
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA---PPPLSLHGQLLWREFFYCAATRNPN- 185
+ +SP+LRFG +S R + Y++ A P ++ +L+WREF+ PN
Sbjct: 250 STISPYLRFGLISIR-------ECYRKAFNASLNPGTVTWINELIWREFYATILYHFPNT 302
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
+ +IPW+ E K+ NA+TG+P IDA + QL +GW+H+ +R VA F
Sbjct: 303 VNEEFLEKYRNKIPWNNKKEYFNKFINAETGYPIIDAAVKQLISDGWMHNRSRMIVASFF 362
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL-SCSSFFQQFFHCYCPVKFGRKADP 304
T+ +L + W +G + F + L+D + + N G W W SC + Q +F + P G+ DP
Sbjct: 363 TK-NLLLDWRKGEEFFAQYLMDYELASNVGGWQWASSCGTDAQPYFRIFNPYTQGQHFDP 421
Query: 305 NGDFI 309
+ ++I
Sbjct: 422 DAEYI 426
>gi|423649036|ref|ZP_17624606.1| hypothetical protein IKA_02823 [Bacillus cereus VD169]
gi|401284534|gb|EJR90400.1| hypothetical protein IKA_02823 [Bacillus cereus VD169]
Length = 476
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 111/227 (48%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W E A + ++ K S GR P S+LA P+L FG +S +L +H
Sbjct: 197 WDPTEEGAYKTFKKFFSSKLVSYSEGRDFPGQNVHSMLA------PYLSFGQISVKLMFH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PWD
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFENFPWDKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F +
Sbjct: 309 EELLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|423562452|ref|ZP_17538728.1| hypothetical protein II5_01856 [Bacillus cereus MSX-A1]
gi|401200617|gb|EJR07502.1| hypothetical protein II5_01856 [Bacillus cereus MSX-A1]
Length = 476
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 111/227 (48%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W+ E A + ++ K S GR P S+LA P+L FG +S +L YH
Sbjct: 197 WEPTEEGAYKTFKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVKLMYH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PW+
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKNFEHFPWNKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ R AVA FL + L + W+EG K F +
Sbjct: 309 EELLRVWQKGETGYPFIDAGMRELWKTGFMHNRTRMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|257058615|ref|YP_003136503.1| DASH family cryptochrome [Cyanothece sp. PCC 8802]
gi|256588781|gb|ACU99667.1| cryptochrome, DASH family [Cyanothece sp. PCC 8802]
Length = 488
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 13/245 (5%)
Query: 72 GVPTLEELG-----FDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
+PTL ELG FD G+L + GGE+E ++RL ++ +K + + K T +L
Sbjct: 190 NIPTLAELGLETPEFDSRGVL--EFIGGESEGIKRLNQYFWQKNRLKDY---KETRNGML 244
Query: 127 ASQ--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNP 184
S + SP+L GCLS R Y ++ K K L +LLWR++F ++
Sbjct: 245 GSDYSSKFSPWLALGCLSPRYIYEEVTKYELERVKNDSTYWLIFELLWRDYFRFICAKHG 304
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
N +PW + + W TG+P +DA MT+L G++ + R VA F
Sbjct: 305 NKVFYSSGLQGFNLPWKEDWQRFQLWQTGNTGYPLVDANMTELAATGFMSNRGRQNVASF 364
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADP 304
LT+ +L ++W G + F+ +L+D D N G W + + + F + K + DP
Sbjct: 365 LTK-NLGINWLMGAEWFESVLIDYDVCSNYGNWNYTAGVGNDARGFRYFNIPKQSKDYDP 423
Query: 305 NGDFI 309
G+++
Sbjct: 424 KGNYL 428
>gi|139473471|ref|YP_001128187.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes str.
Manfredo]
gi|134271718|emb|CAM29951.1| putative deoxyribodipyrimidine photolyase [Streptococcus pyogenes
str. Manfredo]
Length = 469
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
EA ++L R ++ + +A++ + P L S+ LSPFLR G + R YH
Sbjct: 200 EASKQLNRFIQDQ--LAAYHANRDFPAQLGTSR--LSPFLRIGAIGIRTVYH-------A 248
Query: 157 IKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
+++AP L + +L WR+F+ P+ QI W N + W
Sbjct: 249 VRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPDWFQLWKEG 308
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
+TG+P +DA M QL++ GW+H+ R VA FLT+ DL W G + F + L+D D + N
Sbjct: 309 KTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK-DLLCDWRLGEQYFQQQLIDYDAASN 367
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + PV ++ DP G+FI
Sbjct: 368 IGGWQWAASTGTDAVPYFRIFNPVTQSKRFDPKGEFI 404
>gi|89073732|ref|ZP_01160246.1| deoxyribodipyrimidine photolyase [Photobacterium sp. SKA34]
gi|89050507|gb|EAR55999.1| deoxyribodipyrimidine photolyase [Photobacterium sp. SKA34]
Length = 489
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W E +RLE E KA ++ + + P + + LSP+L G LS R H L
Sbjct: 213 WPVDEETIAQRLETFCETKA--ETYHQNRDFPA--IDGTSCLSPYLAIGALSARQCLHQL 268
Query: 151 NKLYKR---IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ-IPWDVNMEA 206
+ + I K + +++WREF+ R P + Q + W +
Sbjct: 269 QQYFPNAFEINKDDGAFTWLNEIVWREFYGHLLHRYPELSKHQPFQKFTQFVKWKDDEAL 328
Query: 207 LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLL 266
L W +TGFP +DA M QLR GW+H+ R A FLT+ DL W G + F + L+
Sbjct: 329 LKAWQEGKTGFPIVDAGMRQLRATGWMHNRLRMITASFLTK-DLLCDWRVGEQWFMQHLI 387
Query: 267 DADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
D D+S N G W W S + Q +F + P G++ DP GDFI
Sbjct: 388 DGDFSSNNGGWQWAASTGTDAQPYFRVFNPTLQGQRFDPKGDFI 431
>gi|433591509|ref|YP_007281005.1| deoxyribodipyrimidine photolyase [Natrinema pellirubrum DSM 15624]
gi|448333271|ref|ZP_21522481.1| deoxyribodipyrimidine photolyase [Natrinema pellirubrum DSM 15624]
gi|433306289|gb|AGB32101.1| deoxyribodipyrimidine photolyase [Natrinema pellirubrum DSM 15624]
gi|445623512|gb|ELY76922.1| deoxyribodipyrimidine photolyase [Natrinema pellirubrum DSM 15624]
Length = 467
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 110/243 (45%), Gaps = 16/243 (6%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG- 131
+PTL +LGFD PPT T A R ER A S + +++G
Sbjct: 176 IPTLADLGFDDPEATPPTVT---TAAAR------ERVADFCSGPIYDYADRRDYPAESGT 226
Query: 132 --LSPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFD 187
LSP L++G + R Y K +R QL WREF+ NP
Sbjct: 227 SRLSPHLKWGTIGPRELYAATEKAAERAAGDDRESVREFQRQLAWREFYAHVLAFNPETV 286
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
+ +I W + +AL W +TG P +DA M QL EGW+H+ R VA FLT+
Sbjct: 287 TEDFSGYEHEIEWRDDPDALEAWQAGETGCPIVDAGMRQLHAEGWMHNRVRMLVASFLTK 346
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNG 306
DL + W G F L D D + + G W W S + Q +F + P+K GR+ DP+
Sbjct: 347 -DLLLDWRAGYDWFRRKLADHDTANDVGGWQWAASTGTDAQPYFRVFNPMKQGREYDPDA 405
Query: 307 DFI 309
++I
Sbjct: 406 EYI 408
>gi|170079382|ref|YP_001736020.1| deoxyribopyrimidine photolyase [Synechococcus sp. PCC 7002]
gi|169887051|gb|ACB00765.1| deoxyribopyrimidine photolyase [Synechococcus sp. PCC 7002]
Length = 477
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 122/273 (44%), Gaps = 13/273 (4%)
Query: 43 SPSPAEAPVTPLLVRQATTPLRDDHDEKYG---VPTLEELGFDIEGLLPPTWKGGETEAM 99
S APVT L Q + + G +PTL +LGF + P T GET ++
Sbjct: 157 SQKSKAAPVTALRDCQGLSDAEQKLAKDLGAIALPTLADLGFSWDK--PFTVPVGETASL 214
Query: 100 RRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYK--RI 157
+L+R E ++ + + P + S+ LS L+FG + R + R
Sbjct: 215 GQLDRFTEN--FIEKYDGDRNFPATDGTSR--LSAALKFGAIGIRTVWQATETALNHCRS 270
Query: 158 KKAPPP-LSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTG 216
K+A ++ +L WREF+ P + PW+ + E W QTG
Sbjct: 271 KEAEAGVITWQQELAWREFYQHCLFFFPELAQGPYREEFKDFPWENDEEKFQAWCAGQTG 330
Query: 217 FPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGM 276
+P IDA M QL E GW+H+ R VA FLT+ DL + W G K F + L+D D + N G
Sbjct: 331 YPIIDAAMRQLNETGWMHNRCRMIVASFLTK-DLIIDWRWGEKYFMQTLVDGDLAANNGG 389
Query: 277 WMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W W + S + + P +K DP D+I
Sbjct: 390 WQWSASSGMDPKPLRIFNPYTQAQKFDPEADYI 422
>gi|359457825|ref|ZP_09246388.1| deoxyribodipyrimidine photolyase [Acaryochloris sp. CCMEE 5410]
Length = 484
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 19/288 (6%)
Query: 28 PLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRD-DHDEKYGVPTLEELGFDIEGL 86
P + QF+ V K + P P Q+ + L D D E +P LE+ G L
Sbjct: 149 PEVFTQFRKQVEK------SAKPKAPFPAPQSLSALPDIDPGE---LPQLEDWGLSSPKL 199
Query: 87 LPPT---WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA--SQTGLSPFLRFGCL 141
P + GGET A+ RL+ ++ + + + K T +L + T SP+ GC+
Sbjct: 200 DPRAMMQFSGGETAALARLQDYIWEQDCLKQY---KETRNGMLQPNNSTKFSPWFALGCV 256
Query: 142 STRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWD 201
S R + + + K L +L+WR++F ++ L + +PW
Sbjct: 257 SPRYIHQQVKAYEQERVKNNSTYWLIFELIWRDYFRFICAKHGKRVFRLSGLQGLALPWQ 316
Query: 202 VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
N E KW QTGFP IDA M +L G++ + R VA FLT+ +L ++W+ G + F
Sbjct: 317 DNRETFEKWQTGQTGFPLIDANMRELAATGFMSNRGRQNVASFLTK-NLGLNWQMGAEWF 375
Query: 262 DELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ L+D D N G W + + + F + VK + DP GD++
Sbjct: 376 ESCLIDYDVCSNWGNWNYAAGVGNDARGFRFFNIVKQAKDCDPQGDYV 423
>gi|258541536|ref|YP_003186969.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-01]
gi|384041457|ref|YP_005480201.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-12]
gi|384049972|ref|YP_005477035.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-03]
gi|384053082|ref|YP_005486176.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-07]
gi|384056314|ref|YP_005488981.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-22]
gi|384058955|ref|YP_005498083.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-26]
gi|384062249|ref|YP_005482891.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-32]
gi|384118325|ref|YP_005500949.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256632614|dbj|BAH98589.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-01]
gi|256635671|dbj|BAI01640.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-03]
gi|256638726|dbj|BAI04688.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-07]
gi|256641780|dbj|BAI07735.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-22]
gi|256644835|dbj|BAI10783.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-26]
gi|256647890|dbj|BAI13831.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-32]
gi|256650943|dbj|BAI16877.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256653934|dbj|BAI19861.1| deoxyribodipyrimidine photolyase [Acetobacter pasteurianus IFO
3283-12]
Length = 309
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 102/225 (45%), Gaps = 6/225 (2%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLF 146
LP W GE A L R +E +A + + + + LSP++R G +S R
Sbjct: 39 LPSGWTSGEKAAHANLHRFIENA--LADYETQRDRADAPHGTSL-LSPYIRVGQISVRQI 95
Query: 147 YHDLNKL-YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNME 205
+H + ++ A P +L WR+F + P+ +PW +
Sbjct: 96 WHAIRHAEHQNPHLATPAEKFLAELGWRDFAWMQMFTTPDLATRNLRAEFDHMPWRADAA 155
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
LA W QTGFP +DA M QL GW+H+ R VA FLT+ L W EG + F L
Sbjct: 156 DLAAWQQGQTGFPLVDAGMRQLARTGWMHNRVRMVVASFLTK-HLLTDWREGERWFYAQL 214
Query: 266 LDADWSVNAGMWMWLSCSSF-FQQFFHCYCPVKFGRKADPNGDFI 309
LDAD +VNA W W + + +F + PV K DP G +I
Sbjct: 215 LDADAAVNAMNWQWGAGTGIDAAPWFRIFNPVGQSEKYDPAGQYI 259
>gi|386845211|ref|YP_006263224.1| deoxyribodipyrimidine photo-lyase [Actinoplanes sp. SE50/110]
gi|359832715|gb|AEV81156.1| deoxyribodipyrimidine photo-lyase [Actinoplanes sp. SE50/110]
Length = 436
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 105/228 (46%), Gaps = 18/228 (7%)
Query: 85 GLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG-LSPFLRFGCLST 143
G P GGETE RRL+ AW R + A T LS +LRFGCLS
Sbjct: 177 GDSPDAVAGGETEGRRRLQ------AWQKEMARYAEDHDDMAADNTSRLSAYLRFGCLSP 230
Query: 144 RLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP--WD 201
L + +P + QL WR+F+Y F + P+ + W
Sbjct: 231 LEL-----ALAAKADDSPGAQAYLRQLCWRDFYYQVTA---TFPEISTRPLREKADQNWR 282
Query: 202 VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
+ +AL W + TG P +DA M QLR EGW+H+ AR A FLT+ L + W G++ F
Sbjct: 283 YDDDALRHWQDGLTGVPIVDAGMRQLRAEGWMHNRARLITAAFLTK-HLGIDWRPGLQWF 341
Query: 262 DELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LLD D N+G W W + + + + + P++ ++ D G ++
Sbjct: 342 FRWLLDGDVPNNSGNWQWTAGTGNDTRPYRRFNPIRQAQRFDAQGVYV 389
>gi|325003004|ref|ZP_08124116.1| deoxyribodipyrimidine photo-lyase [Pseudonocardia sp. P1]
Length = 464
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 14/220 (6%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GET A R L+ VA + + P +G+SP+L++GC+ R DL
Sbjct: 199 GETAAAARWADFLDEG--VAEYESQRDMPAK--KGTSGMSPYLKYGCVHPRTLLADLGSR 254
Query: 154 YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEA---LAKW 210
KA ++ WREF+ R P+ R + +P + A L +W
Sbjct: 255 RGDSVKA-----YRTEIAWREFYADVLYRRPDSARRNYDTGFDHLPLRTDEAAYDDLERW 309
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
+ +TGFP +DA M QLR E W+H+ R VA FL + DL + W G + F +LL+D D
Sbjct: 310 KDGRTGFPIVDAGMRQLRAEAWMHNRVRMVVASFLVK-DLHLPWWWGARHFMQLLVDGDL 368
Query: 271 SVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N W W + S + +F + P+ G + DP+GD++
Sbjct: 369 ASNQHGWQWTAGSGTDAAPYFRIFNPITQGERFDPDGDYV 408
>gi|383449827|ref|YP_005356548.1| Deoxyribodipyrimidine photolyase PhrB3 [Flavobacterium indicum
GPTSA100-9]
gi|380501449|emb|CCG52491.1| Deoxyribodipyrimidine photolyase PhrB3 [Flavobacterium indicum
GPTSA100-9]
Length = 437
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 72 GVPTLEELGF-----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
VPT+EELG+ D P +KGGE+EA++ L++++ + ++ K T L+
Sbjct: 189 AVPTVEELGYSSLQVDERSAFP--FKGGESEALQHLKKYIWEHQQIKTY---KDTRNELV 243
Query: 127 ASQ--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNP 184
Q T L+P+L G LS R YH++ K + + + + +LLWR+FF C + +
Sbjct: 244 GIQYSTKLAPWLANGSLSVRTVYHEVRKFEQEVLENDSTYWVLFELLWRDFFKCVSIKYG 303
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
N L + W N + +A W N T + +I+A M +L+ GW+ + R VA +
Sbjct: 304 NQLFQLSGILNRNYNWKRNEKVIADWINGNTRYDFINANMLELKNTGWMSNRGRQNVASY 363
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS 281
+ ++ W G F+ L+D D N G W +L+
Sbjct: 364 FAK-EMEQDWRIGASYFEAFLIDYDVHSNYGNWNYLA 399
>gi|406707087|ref|YP_006757439.1| FAD-binding protein, DNA photolyase family,DNA photolyase [alpha
proteobacterium HIMB59]
gi|406652863|gb|AFS48262.1| FAD-binding protein, DNA photolyase family,DNA photolyase [alpha
proteobacterium HIMB59]
Length = 447
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 9/220 (4%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GE A +L R+L+ + R + L + LSP+LRFG +S R L
Sbjct: 179 WTPGEKAAQDQLSRYLKTDIDIYKDARDRPD----LDQTSKLSPYLRFGEISPRTVV--L 232
Query: 151 NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
N L K + L+ ++ WREF Y + N + N PW +++ L W
Sbjct: 233 NIL-KSKNLSTSVLTYLSEIGWREFSYSLLYYSKNLSSVPINLKFQNFPWRKSVKDLDLW 291
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
+ +TG P +DA M Q+ E+GW+H+ R V FL + +L ++W G + F E LLD D
Sbjct: 292 KSGKTGIPLVDAAMRQIYEKGWMHNRLRMVVGSFLVK-NLLLNWTLGEQYFQETLLDYDE 350
Query: 271 SVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ NA W W++ C + +F + P+ + DP FI
Sbjct: 351 ASNAAGWQWIAGCGADASPYFRVFNPILQSERFDPQAKFI 390
>gi|228908916|ref|ZP_04072746.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis IBL 200]
gi|228850638|gb|EEM95462.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis IBL 200]
Length = 476
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 115/235 (48%), Gaps = 21/235 (8%)
Query: 83 IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGC 140
IE + PT +G A + ++ K S GR P S+LA P+L FG
Sbjct: 193 IESMWEPTEEG----AYKTFKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQ 242
Query: 141 LSTRLFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
+S +L YH L NK +R +K S QL+WREF Y P N
Sbjct: 243 ISVKLMYHYLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFAVYKPLNKNF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W +TG+P+IDA M +L + G++H+ R AVA FL + L + W+
Sbjct: 301 EHFPWNKEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRTRMAVASFLVK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 360 EGAKWFMDTLLDADIANNIMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|336173299|ref|YP_004580437.1| DASH family cryptochrome [Lacinutrix sp. 5H-3-7-4]
gi|334727871|gb|AEH02009.1| cryptochrome, DASH family [Lacinutrix sp. 5H-3-7-4]
Length = 437
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 9/214 (4%)
Query: 73 VPTLEELGFD---IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ 129
VPTL++LGF I +KGGETEA +RLE + ++ G K T L+ +
Sbjct: 192 VPTLKDLGFSDFKIHNQSAFPFKGGETEAFKRLENYFFQEK---KLGFYKKTRNGLIGTD 248
Query: 130 --TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFD 187
+ LS +L G +S + Y + + K L +L+WR++F + +N N
Sbjct: 249 YSSKLSAWLANGSISAKTIYWKVKEFETLHFKNQSTYWLIFELIWRDYFKYVSKKNNNKI 308
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
+G + W N +A+ KW N++T P+I+A M +L + GW+ + R VA + +
Sbjct: 309 FKIGGILDKTYQWKDNKDAVNKWINSETNEPFINANMNELNKTGWMSNRGRQNVASYFAK 368
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS 281
+L + W G F+ LL+D D N G WM++S
Sbjct: 369 -ELLLDWRIGAAYFESLLIDYDVHSNYGNWMYVS 401
>gi|448633777|ref|ZP_21674276.1| deoxyribodipyrimidine photolyase [Haloarcula vallismortis ATCC
29715]
gi|445750468|gb|EMA01906.1| deoxyribodipyrimidine photolyase [Haloarcula vallismortis ATCC
29715]
Length = 465
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 109/239 (45%), Gaps = 10/239 (4%)
Query: 74 PTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLS 133
PTL +LGF+ PT G EA L+ L+ V + + P S+ LS
Sbjct: 176 PTLADLGFEEPEADVPT--AGTDEARALLDDFLDEN--VYEYEERRDFPADECTSR--LS 229
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
L+FG + R Y + + QL WREF+ +P+
Sbjct: 230 AHLKFGTIGIREVYERTQDAKEGTGGDRRESVREFQSQLAWREFYTQVLFAHPHVVSSNY 289
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
I W+ + E L W + +TG+P +DA M QLREE ++H+ R VA FLT+ DL
Sbjct: 290 KSYENPIEWENDEELLQAWKDGETGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK-DLL 348
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ W G + F E L+D D + + G W W S + Q +F + P+ G DPN ++I
Sbjct: 349 IDWRHGYEWFREKLVDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGEDYDPNAEYI 407
>gi|424841446|ref|ZP_18266071.1| cryptochrome, DASH family [Saprospira grandis DSM 2844]
gi|395319644|gb|EJF52565.1| cryptochrome, DASH family [Saprospira grandis DSM 2844]
Length = 460
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 142/303 (46%), Gaps = 45/303 (14%)
Query: 27 TPLTYHQFQSIVAKMD---SPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDI 83
TP + QF+ V K+ +P P P R PL D +P L + G+++
Sbjct: 157 TPDIFTQFRKEVEKLTPIRAPLPKPQAFPPWSHR---LPLGD-------LPQLSDFGWEM 206
Query: 84 EGLLPPT---WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRF 138
P T +KGGETE ++RL+ +L +AS+ K T LL + + SP+L
Sbjct: 207 PPQDPRTVLQFKGGETEGLKRLQYYLWESDCIASY---KETRNGLLGADYSSKFSPWLAQ 263
Query: 139 GCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQI 198
GCLS + Y ++ + K K L+ +LLWR+FF R++G QI
Sbjct: 264 GCLSPKQIYAEIKRYEKERTKNKSTYWLYFELLWRDFF-----------RLMGKKYGSQI 312
Query: 199 ------------PWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
NM+A W +TG P+IDA M +L + G++ + R VA +L
Sbjct: 313 FLPTGLRGKKKKKLSNNMQAFESWLLGKTGQPFIDANMRELAQTGFMSNRGRQNVASYLI 372
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
DL V+W+ G + F+ L+D D + N W++++ + + P+ ++ DP+G
Sbjct: 373 -NDLKVNWQLGAEYFESTLIDYDVTSNWVNWLYIAGLGNDPREDRYFNPINQSKRYDPDG 431
Query: 307 DFI 309
++I
Sbjct: 432 EYI 434
>gi|406662895|ref|ZP_11070977.1| Cryptochrome DASH [Cecembia lonarensis LW9]
gi|405553063|gb|EKB48369.1| Cryptochrome DASH [Cecembia lonarensis LW9]
Length = 474
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 126/289 (43%), Gaps = 16/289 (5%)
Query: 26 KTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGF---D 82
+TP + QF+ K A V P L ++ ++ +P L G D
Sbjct: 149 QTPEVFTQFRKECEKF-------AKVQPTLPTPKQIKFPNNLNDLGEMPELSTFGLKEPD 201
Query: 83 IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFGC 140
+KGGETE +RRL+ + K + + K T LL S + S +L GC
Sbjct: 202 HSSRSVLVFKGGETEGIRRLQAYFWEKDLLKVY---KETRNGLLGSDYSSKFSAWLSMGC 258
Query: 141 LSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW 200
LS R Y ++ + K KK L +L+WR++F ++ LG W
Sbjct: 259 LSPRFIYEEVKRYEKERKKNQSTYWLIFELIWRDYFRFICKKHGEKVFQLGGIKNNVDKW 318
Query: 201 DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKI 260
N +WAN +TG P+IDA M +L E G++ + R VA FL DL + W G
Sbjct: 319 SRNENYFWRWANGETGIPFIDANMRELNETGFMSNRGRQNVASFLV-NDLGIDWRWGAMY 377
Query: 261 FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F+ L+D D N G WM+++ + + ++ + D GD+I
Sbjct: 378 FESQLIDYDVCSNWGNWMYVAGVGNDPRENRYFNIMRQAQNYDRKGDYI 426
>gi|407973400|ref|ZP_11154312.1| blue light photoreceptor cryptochrome [Nitratireductor indicus
C115]
gi|407431241|gb|EKF43913.1| blue light photoreceptor cryptochrome [Nitratireductor indicus
C115]
Length = 489
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 111/232 (47%), Gaps = 14/232 (6%)
Query: 82 DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFG 139
D G L W GET A +RLE A++ G+ T + +AS+ + LSP L G
Sbjct: 207 DWAGGLRKAWTPGETGAHKRLE------AFLDGGGKGYETLRDRMASEATSSLSPHLSHG 260
Query: 140 CLSTRLFYHDLNKLYKRIKKAPPPL-SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQI 198
++ Y L R P L + +L WREF + NP N
Sbjct: 261 EITP---YQIWQHLEHRNDLTPGDLQTFRKELGWREFCWHLLFHNPQLAAKNFNSDFDAF 317
Query: 199 PWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGM 258
PW+ + AL W +TG+P +DA M QL + GW+H+ AR VA FL + DL + W EG
Sbjct: 318 PWNRDDGALQAWQRGRTGYPVVDAAMRQLWQTGWMHNRARMIVASFLVK-DLRLDWREGE 376
Query: 259 KIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
+ F + L+DAD + N W W++ S +F + PV G K D GD+I
Sbjct: 377 QWFWDTLVDADPASNPANWQWVAGSGADAAPYFRIFNPVLQGEKFDSGGDYI 428
>gi|45387783|ref|NP_991249.1| cryptochrome DASH [Danio rerio]
gi|41688004|dbj|BAD08600.1| cryptochrome dash [Danio rerio]
Length = 520
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 130/292 (44%), Gaps = 20/292 (6%)
Query: 25 GKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGF--- 81
G P Y QF+ V P + TP V+ + L E+ +PT + LG
Sbjct: 153 GGLPDVYTQFRKAVEAQGRVRPVLS--TPEQVKSPPSGL-----EEGPIPTFDSLGQTEP 205
Query: 82 --DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLR 137
D P +GGETEA+ RL+ + VA++ K T ++ T SP+L
Sbjct: 206 LDDCRSAFP--CRGGETEALARLKHYFWDTNAVATY---KETRNGMIGVDFSTKFSPWLA 260
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
GC+S R Y + K + +LLWR++F A + N +
Sbjct: 261 LGCISPRYIYEQIKKYEVERTANQSTYWVIFELLWRDYFKFVALKYGNRIFYMNGLQDKH 320
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
+PW +M+ W +TG P++DA M +L G++ + R VA FLT+ DL + W G
Sbjct: 321 VPWKTDMKMFDAWKEGRTGVPFVDANMRELALTGFMSNRGRQNVASFLTK-DLGLDWRLG 379
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ F+ LL+D D N G W++ + + + +K G D NGD++
Sbjct: 380 AEWFEYLLVDHDVCSNYGNWLYSAGIGNDPRENRKFNMIKQGLDYDNNGDYV 431
>gi|443316924|ref|ZP_21046350.1| deoxyribodipyrimidine photolyase [Leptolyngbya sp. PCC 6406]
gi|442783454|gb|ELR93368.1| deoxyribodipyrimidine photolyase [Leptolyngbya sp. PCC 6406]
Length = 478
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 110/240 (45%), Gaps = 8/240 (3%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+P+ +LGF + LP + GE A+++LE + + ++ + P +L S+ L
Sbjct: 191 LPSTTDLGFSWDQPLPV--EPGEGAALQQLEAFCSQDQAIGAYDEQRNFPFALGTSR--L 246
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRM 189
S L+FG + R + + +R + S+ +L WREF+ P
Sbjct: 247 SAALKFGVIGIRTVWAAAAEAMERCRSDETRQSVTTWQQELAWREFYQHVMYFFPQLATG 306
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
P PW + W +TG+P +DA M QL E GW+H+ R VA FLT+ D
Sbjct: 307 PYRPQWQNFPWVNDEAQFQAWCAGRTGYPIVDAAMRQLNETGWMHNRCRMIVASFLTK-D 365
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L + W G K F + L+D D S N G W W + S + + P +K DP ++I
Sbjct: 366 LIIDWRWGEKYFMQTLVDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAKKFDPEAEYI 425
>gi|160902458|ref|YP_001568039.1| deoxyribodipyrimidine photo-lyase [Petrotoga mobilis SJ95]
gi|160360102|gb|ABX31716.1| Deoxyribodipyrimidine photo-lyase [Petrotoga mobilis SJ95]
Length = 462
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 92 KGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLN 151
KGG E + +ER ++ K ++ + TP + T LSP L+FG +S R Y +N
Sbjct: 211 KGGRKEGLSYIERIVKLK----NYSETRNTPS--IDGTTKLSPHLKFGTVSVREVYGKVN 264
Query: 152 KLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI---CVQIPWDVNMEALA 208
+ + + QL WR+FF P+ +LGN QI W+ +++
Sbjct: 265 ENFGN------EHEIITQLHWRDFFTHILYHFPH---VLGNSFKEKYNQIQWENDVDKFK 315
Query: 209 KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDA 268
W +TG+P +DA M QL GW+H+ R FL + DL + W G K F + L+D
Sbjct: 316 AWCTGRTGYPIVDAGMRQLNLTGWMHNRVRMITGSFLVK-DLHIDWRWGEKYFAQRLVDY 374
Query: 269 DWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
D ++N G W W++ + Q FF + P+ +K DP ++I
Sbjct: 375 DPAINNGNWQWVASTGCDAQPFFRIFNPILQQQKFDPECNYI 416
>gi|434400657|ref|YP_007134661.1| Deoxyribodipyrimidine photo-lyase [Stanieria cyanosphaera PCC 7437]
gi|428271754|gb|AFZ37695.1| Deoxyribodipyrimidine photo-lyase [Stanieria cyanosphaera PCC 7437]
Length = 475
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 111/243 (45%), Gaps = 14/243 (5%)
Query: 72 GVPTLEELGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ 129
+PT ++LG+ D +L P GET A RL R + + + P SQ
Sbjct: 190 NLPTAKDLGYIWDNPLILAP----GETAAKERLVEFCSRA--INEYDEQRNYPAVDGTSQ 243
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNF 186
LS L+FG + R + + ++ + ++ +L WREF+ P
Sbjct: 244 --LSAALKFGAIGIRTVWEASTEAHENCRSDETRDNIRSWQQELAWREFYQHCMYFFPEL 301
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
++ PW+ N + W +TG+P +DA M QL E GW+H+ R VA FLT
Sbjct: 302 EQGAYRREFKDFPWENNEDYFQAWCEGKTGYPIVDAAMRQLNEIGWMHNRCRMIVASFLT 361
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNG 306
+ DL ++W+ G K F + L D D S N G W W + S + + P +K DP G
Sbjct: 362 K-DLIINWQWGEKYFMQKLFDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAQKYDPEG 420
Query: 307 DFI 309
++I
Sbjct: 421 EYI 423
>gi|421506155|ref|ZP_15953086.1| deoxyribodipyrimidine photolyase [Pseudomonas mendocina DLHK]
gi|400343105|gb|EJO91484.1| deoxyribodipyrimidine photolyase [Pseudomonas mendocina DLHK]
Length = 477
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 132/299 (44%), Gaps = 25/299 (8%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAK---MDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPT 75
I+ ++GG + Y QF+ + + M P PV QA TPL D +P
Sbjct: 139 ILTRSGGYFQV-YSQFRKVCYEHLHMALPGLVARPVA-----QAPTPLASD-----AIPH 187
Query: 76 LEELGFDIEG-LLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+ GF + L W GE A +RLER + + + + + P L + LSP
Sbjct: 188 AVD-GFAMPSEQLRSLWPAGEEAARQRLERFADEQ--IGYYKDERDFPA--LPGTSQLSP 242
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKKAPPP--LSLHGQLLWREFFYCAATRNPNFDRMLG- 191
+L G LS R H + + ++ +LLWREF+ P R
Sbjct: 243 YLAAGVLSPRQCLHAALAANRGEFDSGNAGVVTWVNELLWREFYKHILVGYPRVSRHRAF 302
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
P + W E LA W +TG P IDA M QL E GW+H+ R VA FLT+ +L
Sbjct: 303 RPETEAVAWRRAPEELAAWQQGRTGLPIIDAAMRQLLETGWMHNRLRMIVAMFLTK-NLL 361
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ W EG + F L+D D + N G W W S + +F + P+ +K DP G FI
Sbjct: 362 IDWREGERFFMCHLIDGDLAANNGGWQWSASTGTDAAPYFRIFNPISQSQKFDPEGRFI 420
>gi|399519482|ref|ZP_10760277.1| deoxyribodipyrimidine photo-lyase type I [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112578|emb|CCH36835.1| deoxyribodipyrimidine photo-lyase type I [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 478
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 24/285 (8%)
Query: 29 LTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLP 88
+ Y + + + + +P A+ TPL + P + E + P+ L
Sbjct: 156 VCYERLHTALPALIAPPKAQ---TPLAIGSEAIP---ETAEGFATPSAS---------LR 200
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W GE A++RL+R E + V + + P SQ LS +L G +S R H
Sbjct: 201 LLWPAGEEAALQRLQRFSEEQ--VTYYKDERDFPAKPGTSQ--LSAYLAAGVVSPRQCLH 256
Query: 149 DLNKLYKRIKKAPPP--LSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ-IPWDVNME 205
+ + P ++ +LLWREF+ P R + + +PW E
Sbjct: 257 AALAANQGEFDSGNPGVITWINELLWREFYKHTLVGYPRVSRHRAFRLETEAVPWRHAPE 316
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
LA W +TG P IDA M QL E GW+H+ R VA FLT+ +L + W EG + F L
Sbjct: 317 DLAAWQEGRTGLPIIDAAMRQLLETGWMHNRLRMIVAMFLTK-NLLIDWREGERFFMRHL 375
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P+ +K DP G FI
Sbjct: 376 IDGDLAANNGGWQWSASTGTDAAPYFRIFNPISQSQKFDPEGQFI 420
>gi|351729025|ref|ZP_08946716.1| deoxyribodipyrimidine photo-lyase [Acidovorax radicis N35]
Length = 496
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 124/281 (44%), Gaps = 30/281 (10%)
Query: 40 KMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGL----LPPTWKGGE 95
K+D+ PV R A P + + VPTL LGF+ L LP G +
Sbjct: 172 KVDAFQLTSYPVERHAHRLAPRP----QEHRQAVPTLASLGFEATALSQLKLPTGASGAQ 227
Query: 96 T---EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNK 152
+ + R+ER+ + + + A G + LS LRFG +S RL +
Sbjct: 228 QLFDDFLGRIERYEDTRNFPAVKG------------PSYLSVHLRFGTISPRLLARTAHG 275
Query: 153 LYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEA---LAK 209
L ++ P + +L+WR+F++ +P+ P I W+ EA A
Sbjct: 276 LM--LQGNPGATTWLSELIWRDFYFQILHHHPHVVGHSFKPAYDAIQWESGPEADALFAA 333
Query: 210 WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDAD 269
W +TG+P +DA M Q+ + G++H+ R VA FL + DL + W G F L D D
Sbjct: 334 WCEGRTGYPLVDAAMAQINQTGYMHNRLRMVVASFLVK-DLGIDWRWGEAYFATHLNDFD 392
Query: 270 WSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
+ N G W W S S Q +F + PV K DP G FI
Sbjct: 393 LAANNGGWQWASSSGCDAQPYFRIFNPVSQSEKFDPEGKFI 433
>gi|448622754|ref|ZP_21669403.1| deoxyribodipyrimidine photolyase [Haloferax denitrificans ATCC
35960]
gi|445753262|gb|EMA04679.1| deoxyribodipyrimidine photolyase [Haloferax denitrificans ATCC
35960]
Length = 484
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 121/302 (40%), Gaps = 19/302 (6%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR----DDHDEKYGV-- 73
I N G T Y F D P P P L T D D ++ V
Sbjct: 132 ITTNAGDTYSVYTYFWKKWRDRDKPEPYPEPTADDLADAGTLETAAESLSDGDAEFDVAV 191
Query: 74 ---PTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
PT+ +LGF E G A RL + + R T + +
Sbjct: 192 GDLPTISDLGF--EEPTAAVQSAGTEAARERLSAFCADAIYRYADDRDYPTRDAT----S 245
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDR 188
LS L+FG + R Y + + ++ QL WREF+ +P+
Sbjct: 246 RLSTDLKFGTIGIREVYAATAAAREGVGGERDESVEEFQSQLAWREFYAHVLREHPSVVT 305
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
I W + E LA W +TG+P +DA M QLREE ++H+ R VA FLT+
Sbjct: 306 ENYKEYEEDIAWRDDAEELAAWKEGKTGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK- 364
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL W G F E L D D + + G W W S + Q +F + P+ G + DP+G+
Sbjct: 365 DLLCDWRHGYAHFREHLADHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDGE 424
Query: 308 FI 309
+I
Sbjct: 425 YI 426
>gi|449145685|ref|ZP_21776486.1| deoxyribodipyrimidine photolyase [Vibrio mimicus CAIM 602]
gi|449078633|gb|EMB49566.1| deoxyribodipyrimidine photolyase [Vibrio mimicus CAIM 602]
Length = 469
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 94/185 (50%), Gaps = 13/185 (7%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQ-----LLWREFFYCAATRNPNF 186
LSP+L G LS R + +LY+ + A LS Q L+WREF+ PN
Sbjct: 239 LSPYLAIGALSAR---QCVARLYR--ESAMSALSEGAQVWLSELIWREFYQHLVAIEPNI 293
Query: 187 DRMLGN-PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
+ ++ W + E +W QTG+P +DA M QL + GW+H+ R VA FL
Sbjct: 294 SKSRDFLEWGARLEWWNDSEKFQRWCEGQTGYPIVDAAMRQLNQTGWMHNRLRMIVASFL 353
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADP 304
T+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K DP
Sbjct: 354 TK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDP 412
Query: 305 NGDFI 309
NGDFI
Sbjct: 413 NGDFI 417
>gi|386042915|ref|YP_005961720.1| deoxyribodipyrimidine photo-lyase [Listeria monocytogenes 10403S]
gi|404409820|ref|YP_006695408.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC5850]
gi|345536149|gb|AEO05589.1| deoxyribodipyrimidine photo-lyase [Listeria monocytogenes 10403S]
gi|404229646|emb|CBY51050.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC5850]
Length = 467
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL ++ VA + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDSGEKTANTRLANFIKHD--VADYDKARDFPE--LDKTSHLSRYLRTGEISVRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A +L WR+F+ PN PI I W+ N E
Sbjct: 245 ALQENEATEGRA----IFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W + +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKAWQDGKTGFPLVDAAMRQLKETGWMHNRLRMVTASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K DP G FI
Sbjct: 357 IDYDSASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTGKFI 401
>gi|94988861|ref|YP_596962.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes MGAS9429]
gi|94992751|ref|YP_600850.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes MGAS2096]
gi|94542369|gb|ABF32418.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes MGAS9429]
gi|94546259|gb|ABF36306.1| Deoxyribodipyrimidine photolyase [Streptococcus pyogenes MGAS2096]
Length = 480
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
EA ++L R ++ + +A++ + P L S+ LSPFLR G + R YH
Sbjct: 211 EASKQLNRFIQDQ--LAAYHANRDFPAQLGTSR--LSPFLRIGAIGIRTVYH-------A 259
Query: 157 IKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
+++AP L + +L WR+F+ P+ QI W N + W
Sbjct: 260 VRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPDWFQLWKEG 319
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
+TG+P +DA M QL++ GW+H+ R VA FLT+ DL W G + F + L+D D + N
Sbjct: 320 KTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK-DLLCDWRLGEQHFQQQLIDYDAASN 378
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + PV ++ DP G+FI
Sbjct: 379 IGGWQWAASTGTDAVPYFRVFNPVTQSKRFDPKGEFI 415
>gi|417856580|ref|ZP_12501639.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes HKU
QMH11M0907901]
gi|387933535|gb|EIK41648.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes HKU
QMH11M0907901]
Length = 469
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
EA ++L R ++ + +A++ + P L S+ LSPFLR G + R YH
Sbjct: 200 EASKQLNRFIQDQ--LAAYHANRDFPAQLGTSR--LSPFLRIGAIGIRTVYH-------A 248
Query: 157 IKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
+++AP L + +L WR+F+ P+ QI W N + W
Sbjct: 249 VRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPDWFQLWKEG 308
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
+TG+P +DA M QL++ GW+H+ R VA FLT+ DL W G + F + L+D D + N
Sbjct: 309 KTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK-DLLCDWRLGEQHFQQQLIDYDAASN 367
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + PV ++ DP G+FI
Sbjct: 368 IGGWQWAASTGTDAVPYFRVFNPVTQSKRFDPKGEFI 404
>gi|386715963|ref|YP_006182287.1| deoxyribodipyrimidine photo-lyase [Halobacillus halophilus DSM
2266]
gi|384075520|emb|CCG47015.1| deoxyribodipyrimidine photo-lyase [Halobacillus halophilus DSM
2266]
Length = 480
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
+S FLR G +S R YH ++ K + +L WR+F+ PN G
Sbjct: 238 MSRFLRTGAISIRTVYHLIHDQVDYRKNTEGVETYISELAWRDFYNMIYHFYPN----AG 293
Query: 192 NPICVQ----IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
+ V+ +PW+ + + +W +TGFP IDA M Q+ E GW+H+ R AVA FLT+
Sbjct: 294 DEEMVEKYRGLPWNYDEDLFNQWKEGRTGFPIIDAAMRQMNETGWMHNRLRMAVASFLTK 353
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNG 306
DL + W G + F E L+D D + N G W W S + +F + P + + DP+G
Sbjct: 354 -DLLMDWRAGERYFAEQLIDYDPASNIGGWQWAASTGTDPVPYFRVFNPTRQSERFDPHG 412
Query: 307 DFI 309
FI
Sbjct: 413 RFI 415
>gi|229070649|ref|ZP_04203886.1| Deoxyribodipyrimidine photolyase [Bacillus cereus F65185]
gi|229080332|ref|ZP_04212857.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock4-2]
gi|228703001|gb|EEL55462.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock4-2]
gi|228712471|gb|EEL64409.1| Deoxyribodipyrimidine photolyase [Bacillus cereus F65185]
Length = 476
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MEAIWDPTEEGAYKTFKKFFSSKLVSYSEGRDFPDQNVHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L +H L NK +R +K S QL+WREF Y P N P
Sbjct: 247 LMFHYLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNKEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|229185362|ref|ZP_04312545.1| Deoxyribodipyrimidine photolyase [Bacillus cereus BGSC 6E1]
gi|376267016|ref|YP_005119728.1| Deoxyribodipyrimidine photolyase [Bacillus cereus F837/76]
gi|228598095|gb|EEK55732.1| Deoxyribodipyrimidine photolyase [Bacillus cereus BGSC 6E1]
gi|364512816|gb|AEW56215.1| Deoxyribodipyrimidine photolyase [Bacillus cereus F837/76]
Length = 476
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 111/235 (47%), Gaps = 25/235 (10%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTCKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NK--------LYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
L YH L NK K++ S QL+WREF Y P N
Sbjct: 247 LIYHYLINKSTESQCSLFEKQVN------SFIRQLIWREFSYYMLYHYPFTAYKPLNKSF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W +TG+P+IDA M +L + G++H+ R AVA FL + L + W+
Sbjct: 301 EHFPWNNEKELLRVWQKGETGYPFIDAGMRELWQTGFMHNRTRMAVASFLIK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 360 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|379729344|ref|YP_005321540.1| deoxyribodipyrimidine photolyase [Saprospira grandis str. Lewin]
gi|378574955|gb|AFC23956.1| deoxyribodipyrimidine photolyase [Saprospira grandis str. Lewin]
Length = 466
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 142/307 (46%), Gaps = 53/307 (17%)
Query: 27 TPLTYHQFQSIVAKMD---SPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDI 83
TP + QF+ V K+ +P P P R PL D +P L + G++
Sbjct: 159 TPDIFTQFRKEVEKLTPVRAPLPKPKAFNPWSHR---LPLGD-------LPQLSDFGWE- 207
Query: 84 EGLLPPT-------WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSP 134
+PP +KGGETE ++RL +L +AS+ K T LL + + SP
Sbjct: 208 ---MPPQDDRTVLQFKGGETEGLKRLHYYLWESDCIASY---KETRNGLLGADYSSKFSP 261
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
+L GCLS + Y ++ + K K L+ +LLWR+FF R++G
Sbjct: 262 WLAQGCLSPKQIYDEIKRYEKERTKNKSTYWLYFELLWRDFF-----------RLMGKKY 310
Query: 195 CVQI------------PWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
QI NM+A W +TG P+IDA M +L + G++ + R VA
Sbjct: 311 GSQIFLPTGLRGKKKKKLSNNMQAFESWLLGKTGQPFIDANMRELAQTGFMSNRGRQNVA 370
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKA 302
+L DL V+W+ G + F+ +L+D D + N W++++ + + P+ ++
Sbjct: 371 SYLI-NDLKVNWQLGAEYFESVLIDYDVTSNWVNWLYIAGLGNDPREDRYFNPISQSKRY 429
Query: 303 DPNGDFI 309
DP+G++I
Sbjct: 430 DPDGEYI 436
>gi|291303346|ref|YP_003514624.1| deoxyribodipyrimidine photo-lyase [Stackebrandtia nassauensis DSM
44728]
gi|290572566|gb|ADD45531.1| Deoxyribodipyrimidine photo-lyase [Stackebrandtia nassauensis DSM
44728]
Length = 436
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 52 TPLLVRQATTPLRDDHDEKYGVPTLEELGFD--------IEGLLPPTWKGGETEAMRRLE 103
TP L + TP R +H+ + ++ D +EG GGET +RR +
Sbjct: 182 TPYLRSWSATPWRPEHEAPQAIRLPADVTGDDPASVIGPVEGGSSDVVDGGETAGLRRWD 241
Query: 104 RHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPP 163
++R+ P + T LS +LRFGC+S + D P
Sbjct: 242 SWIDREP-----DYPAIHDDLAADDTTRLSGYLRFGCVSPLVVAADPRT----------P 286
Query: 164 LSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAI 223
+L QL WR+F++ P P + W + AL W + +TG P +DA
Sbjct: 287 EALVRQLCWRDFYHQVLHGFPRLATDNYRP-GARDAWVDDEPALRAWQDGETGVPLVDAG 345
Query: 224 MTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS 283
M QLR +GW+H+ AR A +LT+ DL + W G FD L+DAD + N G W W + +
Sbjct: 346 MRQLRTQGWMHNRARMVAASYLTK-DLGIDWRHGAAWFDRWLVDADVANNYGNWQWTAGT 404
Query: 284 SFFQQFFHCYCPVKFGRKADPNGDF 308
+ + + P + ++ DP ++
Sbjct: 405 GNDSRPYRRFNPARQAQRYDPRHEY 429
>gi|392349314|ref|XP_003750352.1| PREDICTED: cryptochrome-1-like, partial [Rattus norvegicus]
Length = 281
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W S E ++F+ELLLDADWS+NAG WMWLSCSSFFQQFFHCYCPV FGR+ DPNGD+I
Sbjct: 124 WKSAAE--QVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 180
>gi|118478461|ref|YP_895612.1| deoxyribodipyrimidine photo-lyase type I [Bacillus thuringiensis
str. Al Hakam]
gi|196042568|ref|ZP_03109807.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
03BB108]
gi|118417686|gb|ABK86105.1| deoxyribodipyrimidine photo-lyase type I [Bacillus thuringiensis
str. Al Hakam]
gi|196026052|gb|EDX64720.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
03BB108]
Length = 476
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 111/235 (47%), Gaps = 25/235 (10%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTCKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NK--------LYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
L YH L NK K++ S QL+WREF Y P N
Sbjct: 247 LIYHYLINKSTESQCSLFEKQVN------SFIRQLIWREFSYYMLYHYPFTAYKPLNKSF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W +TG+P+IDA M +L + G++H+ R AVA FL + L + W+
Sbjct: 301 EHFPWNNEKELLRVWQKGETGYPFIDAGMRELWQTGFMHNRTRMAVASFLIK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 360 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|389581360|ref|ZP_10171387.1| deoxyribodipyrimidine photolyase [Desulfobacter postgatei 2ac9]
gi|389402995|gb|EIM65217.1| deoxyribodipyrimidine photolyase [Desulfobacter postgatei 2ac9]
Length = 471
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 96/186 (51%), Gaps = 7/186 (3%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+A +GLSP+L G +S+R+ + +++ + +LLWR+F++ P+
Sbjct: 239 VAGTSGLSPYLAIGAVSSRMCLAGVIS----AEQSRGGTTWKNELLWRDFYHHLMFFIPD 294
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
R + ++ WD N E LA W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 295 LSRQACFHAWGDRLLWDDNPELLAAWQAGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 354
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKAD 303
LT+ DL + W G F L+D D+ N G W W S Q +F + PV G+K D
Sbjct: 355 LTK-DLHIDWRHGQAYFMRHLVDGDFPANNGGWQWSASTGCDAQPYFRIFNPVSQGKKFD 413
Query: 304 PNGDFI 309
P G F+
Sbjct: 414 PGGRFV 419
>gi|434375590|ref|YP_006610234.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis HD-789]
gi|401874147|gb|AFQ26314.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis HD-789]
Length = 476
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 117/263 (44%), Gaps = 22/263 (8%)
Query: 62 PLRDDHDEKYGVPTLEELGFDIEGLLP---------PTWKGGETEAMRRLERHLERKAWV 112
P+R K+G L LLP W E A + ++ K
Sbjct: 159 PIRKVQSIKWGNSLPASLSVSELHLLPTIPWTSHMEAIWDPTEEGAYKAFKKFFSSKLAS 218
Query: 113 ASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL-NKLYKRIKK--APPPLSLH 167
S GR P S+LA P+L FG +S YH L NK +R S
Sbjct: 219 YSEGRDFPNQNTHSMLA------PYLSFGQISVSWMYHYLINKSTERQCSLFEEQVNSFI 272
Query: 168 GQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQL 227
QL+WREF Y P N PWD E L W +TG+P+IDA M +L
Sbjct: 273 RQLIWREFSYYLLYHYPFTVYKPLNKSFENFPWDKEEELLRVWQKGKTGYPFIDAGMREL 332
Query: 228 REEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFF 286
+ G++H+ AR AVA FL + L + W+EG K F + LLDAD + N W W++ S +
Sbjct: 333 WQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMDTLLDADIANNTMGWQWVAGSGADA 391
Query: 287 QQFFHCYCPVKFGRKADPNGDFI 309
+F + P+ G K D NG++I
Sbjct: 392 SPYFRIFNPITQGEKFDKNGEYI 414
>gi|312114970|ref|YP_004012566.1| DNA photolyase FAD-binding protein [Rhodomicrobium vannielii ATCC
17100]
gi|311220099|gb|ADP71467.1| DNA photolyase FAD-binding protein [Rhodomicrobium vannielii ATCC
17100]
Length = 484
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 116/263 (44%), Gaps = 7/263 (2%)
Query: 49 APVTPLLVRQA-TTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLE 107
AP TPL Q P + LE D G + W+ GET A RL +E
Sbjct: 166 APATPLPAPQKLAAPDSWPRSDALASLALEPTRPDWAGGIRAAWRPGETAARERLTAFIE 225
Query: 108 RKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH 167
A + S+ + P + + LSP L FG + R +H + + +
Sbjct: 226 --AALPSYRTRRDEPG--IDGTSRLSPHLAFGEIGPRQIWHAVQAAAEAAGDHAAADAYL 281
Query: 168 GQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQL 227
++ WREF Y P+ P PW + +AL W +TG+P +DA M QL
Sbjct: 282 REVGWREFSYHLLFHFPHLPEAPFRPEFTAFPWRDDADALEAWQRGRTGYPIVDAGMRQL 341
Query: 228 REEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF-F 286
+ GW+H+ R VA FL + L W+ G F + L+DAD + NA W W++ S
Sbjct: 342 WQTGWMHNRVRMIVASFLIK-HLLSPWQTGADWFWDTLVDADLANNAASWQWVAGSGADA 400
Query: 287 QQFFHCYCPVKFGRKADPNGDFI 309
+F + PV G K DP GD++
Sbjct: 401 APYFRIFNPVLQGEKFDPRGDYV 423
>gi|422808697|ref|ZP_16857108.1| Deoxyribodipyrimidine photolyase [Listeria monocytogenes FSL
J1-208]
gi|378752311|gb|EHY62896.1| Deoxyribodipyrimidine photolyase [Listeria monocytogenes FSL
J1-208]
Length = 467
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 104/225 (46%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL ++ +A + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDSGERAANTRLANFIKHD--IADYDKARDFPE--LDKTSHLSRYLRTGEISIRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A + +L WR+F+ PN PI I W+ N E
Sbjct: 245 ALQETEATEGRA----TFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKAWQEGETGFPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K DP G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQAQKFDPTGKFI 401
>gi|392382530|ref|YP_005031727.1| deoxyribodipyrimidine photo-lyase [Azospirillum brasilense Sp245]
gi|356877495|emb|CCC98335.1| deoxyribodipyrimidine photo-lyase [Azospirillum brasilense Sp245]
Length = 485
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 107/230 (46%), Gaps = 7/230 (3%)
Query: 82 DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCL 141
D G L W GE A RL L+ VA++ + P + +SP L FG +
Sbjct: 198 DWAGGLRERWTPGEEAARERLADFLDGP--VAAYPAERDRPDH--DGTSAMSPHLAFGEI 253
Query: 142 STRLFYHDLNKLY-KRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW 200
R +H +R + A + +L WREF + P + + PW
Sbjct: 254 GPRQIWHAARHAADQRHELAAGAEAFLRELGWREFNHHLLREEPGIPDTPLDTRFARFPW 313
Query: 201 DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKI 260
+ L W + +TG+P +DA M QL + GW+H+ R V FL + DL + W+EG
Sbjct: 314 RTDKAGLRAWQSGRTGYPIVDAGMRQLWQTGWMHNRVRMIVGSFLIK-DLLIPWQEGESW 372
Query: 261 FDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F + L+DAD + NAG W W++ C + FF + P+ G K DP G ++
Sbjct: 373 FWDTLVDADIANNAGNWQWVAGCGADAAPFFRVFNPILQGEKFDPEGAYV 422
>gi|126658972|ref|ZP_01730114.1| probable bacterial cryptochrome [Cyanothece sp. CCY0110]
gi|126619770|gb|EAZ90497.1| probable bacterial cryptochrome [Cyanothece sp. CCY0110]
Length = 486
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 131/290 (45%), Gaps = 16/290 (5%)
Query: 28 PLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG-VPTLEELGF----- 81
P +Q + + V P L+ L D + G +P+LEELG
Sbjct: 145 PFEVNQLPEVFTSFRKKVEKNSTVNPTLI--TPRKLLSLPDVEIGNIPSLEELGLKKSDS 202
Query: 82 DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFG 139
D G+L +KGGET ++RL+ + + + + K T +L + + SP+L G
Sbjct: 203 DSRGVL--NFKGGETAGIKRLQDYFWERNCLKEY---KETRNGMLGADYSSKFSPWLAHG 257
Query: 140 CLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
CLS R Y ++ K + K L +LLWR++F ++ N + IP
Sbjct: 258 CLSPRYIYEEVQKYEEERVKNNSTYWLIFELLWRDYFRFICAKHGNKIFYKSGLQGLDIP 317
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W + + W +TG+P +DA M ++ G++ + R VA FLT+ +L ++W G +
Sbjct: 318 WKEDQDRFILWQEGKTGYPLVDANMREIAATGFMSNRGRQNVASFLTK-NLGINWIMGAE 376
Query: 260 IFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F+ LL+D D N G W + + + F + K + D GD++
Sbjct: 377 WFESLLIDYDVCSNYGNWNYTAGVGNDARGFRYFNIPKQSKDYDSKGDYL 426
>gi|209884870|ref|YP_002288727.1| deoxyribodipyrimidine photo-lyase [Oligotropha carboxidovorans OM5]
gi|337741487|ref|YP_004633215.1| deoxyribodipyrimidine photolyase PhrB [Oligotropha carboxidovorans
OM5]
gi|386030503|ref|YP_005951278.1| deoxyribodipyrimidine photolyase PhrB [Oligotropha carboxidovorans
OM4]
gi|209873066|gb|ACI92862.1| deoxyribodipyrimidine photo-lyase [Oligotropha carboxidovorans OM5]
gi|336095571|gb|AEI03397.1| deoxyribodipyrimidine photolyase PhrB [Oligotropha carboxidovorans
OM4]
gi|336099151|gb|AEI06974.1| deoxyribodipyrimidine photolyase PhrB [Oligotropha carboxidovorans
OM5]
Length = 487
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 134/317 (42%), Gaps = 27/317 (8%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ + I + L+ PS R E +G + + + + P PA + P + +
Sbjct: 130 VETHISRSDLLASPSMIRNKEGHGLRVFTPFWKRVRALGDPPPPLPAMKKLPPSVASVES 189
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
+ D LE L D G L WK GE A ++L+ L+ + GR
Sbjct: 190 ESIEDWQ--------LEPLHPDWAGGLRARWKPGEAGARKKLDAFLDDAIDGYASGR--- 238
Query: 121 TPQSLLASQTG-LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH------GQLLWR 173
L QT LS LRFG +S R +H R A P H +L WR
Sbjct: 239 --DDLARDQTSHLSAHLRFGEISPRQVFH-----ATRFAAAHNPALSHDVEKFLSELGWR 291
Query: 174 EFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWI 233
EF P+ R P PW + AL+ W +TG+P +DA M +L G +
Sbjct: 292 EFCRHLLFDQPDLHRQDLQPSFDNFPWRTDRAALSAWQQGRTGYPIVDAGMRELWHTGTM 351
Query: 234 HHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHC 292
H+ R A FL + L + W EG + F + L+DAD N G W W++ C + +F
Sbjct: 352 HNRVRMVAASFLVK-HLLIDWREGERWFWDTLVDADPGSNPGNWQWVAGCGADAAPYFRI 410
Query: 293 YCPVKFGRKADPNGDFI 309
+ PV G K DP+G ++
Sbjct: 411 FNPVLQGEKFDPDGAYV 427
>gi|148657549|ref|YP_001277754.1| deoxyribodipyrimidine photolyase [Roseiflexus sp. RS-1]
gi|148569659|gb|ABQ91804.1| Deoxyribodipyrimidine photo-lyase type I [Roseiflexus sp. RS-1]
Length = 491
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 119/250 (47%), Gaps = 19/250 (7%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA--SQT 130
+P +L + +P GGET RL L+ +A G ++LLA + +
Sbjct: 187 IPDNPDLDVSVIQRIP---AGGETTGAARLAAFLDPRATHGIAG--YADGRNLLAEPATS 241
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRI---KKAPPPLSLH-------GQLLWREFFYCAA 180
LSP+LRFGC++ R L R + A +L G+L WR+F+Y
Sbjct: 242 RLSPYLRFGCVAPRAALRAALNLLDRAGEEQDAECAATLTRSIETWIGELAWRDFYYQIL 301
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
+P+ R P + W+ + W +TG+P +DA M QL E W+H+ AR
Sbjct: 302 WHHPHVLRSAFKPQYDALEWENDPALFDAWKEGRTGYPVVDAAMRQLNREAWMHNRARMI 361
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFG 299
VA FLT+ DL + W G + F + L+D D + N G W W + + + Q +F + PV G
Sbjct: 362 VASFLTK-DLLIDWRWGERYFMQQLVDGDHAANNGGWQWSAGTGTDAQPYFRIFNPVSQG 420
Query: 300 RKADPNGDFI 309
+ DP G ++
Sbjct: 421 QTFDPKGAYV 430
>gi|448666718|ref|ZP_21685363.1| deoxyribodipyrimidine photolyase [Haloarcula amylolytica JCM 13557]
gi|445771849|gb|EMA22905.1| deoxyribodipyrimidine photolyase [Haloarcula amylolytica JCM 13557]
Length = 465
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 111/242 (45%), Gaps = 12/242 (4%)
Query: 72 GVPTLEELGFDI-EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+PTL +LGFD E +P G EA L+ L+ V + + P S+
Sbjct: 174 ALPTLADLGFDEPEADVP---AAGTDEARALLDDFLDEN--VYEYEERRDFPADECTSR- 227
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDR 188
LS L+FG + R Y + + QL WREF+ +P+
Sbjct: 228 -LSAHLKFGTIGIREVYDRTEDAKEGTGGDRRESVREFQSQLAWREFYTQVLFAHPHVVS 286
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
I W+ + E L W + +TG+P +DA M QLREE ++H+ R VA FLT+
Sbjct: 287 SNYKSYENPIEWENDEELLQAWKDGETGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK- 345
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL V W G + F E L+D D + + G W W S + Q +F + P+ G DP+ +
Sbjct: 346 DLLVDWRHGYEWFREKLVDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGEDYDPDAE 405
Query: 308 FI 309
+I
Sbjct: 406 YI 407
>gi|448301230|ref|ZP_21491223.1| deoxyribodipyrimidine photolyase [Natronorubrum tibetense GA33]
gi|445583966|gb|ELY38290.1| deoxyribodipyrimidine photolyase [Natronorubrum tibetense GA33]
Length = 482
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNP 184
+ + LS L++G + R Y + R + S+ QL WREF+ NP
Sbjct: 238 TTSRLSVHLKWGTIGVREVYAATERARDRAETDEQRASVAAFQRQLAWREFYAHVLAFNP 297
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ +IPW + + LA W +TG+P +DA M QL EGW+H+ R VA F
Sbjct: 298 ETVTENFSGYENEIPWRNDPDELAAWKAGETGYPIVDAGMRQLLAEGWMHNRVRMLVAAF 357
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKAD 303
LT+ DL + W EG F L D D + + G W W S + Q +F + P K GR+ D
Sbjct: 358 LTK-DLLIDWREGYDWFRRKLADHDTANDVGGWQWAASTGTDAQPYFRVFNPTKQGREYD 416
Query: 304 PNGDFI 309
P+ ++I
Sbjct: 417 PDAEYI 422
>gi|404412670|ref|YP_006698257.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC7179]
gi|404238369|emb|CBY59770.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC7179]
Length = 467
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL ++ VA + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDSGEKTANTRLANFIKHD--VADYDKARDFPE--LDKTSHLSRYLRTGEISVRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A +L WR+F+ PN PI I W+ N E
Sbjct: 245 ALQENEATEGRA----IFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W + +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKAWQDGKTGFPLVDAAMRQLKETGWMHNRLRMVTASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K DP G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTGKFI 401
>gi|47096881|ref|ZP_00234460.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes str. 1/2a
F6854]
gi|254911267|ref|ZP_05261279.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes J2818]
gi|254935594|ref|ZP_05267291.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes F6900]
gi|386046246|ref|YP_005964578.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes J0161]
gi|47014746|gb|EAL05700.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes serotype
1/2a str. F6854]
gi|258608175|gb|EEW20783.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes F6900]
gi|293589198|gb|EFF97532.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes J2818]
gi|345533237|gb|AEO02678.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes J0161]
Length = 467
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL ++ VA + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDSGEKTANTRLANFIKHD--VADYDKARDFPE--LDKTSHLSRYLRTGEISVRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A +L WR+F+ PN PI I W+ N E
Sbjct: 245 ALQENEATEGRA----IFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W + +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKAWQDGKTGFPLVDAAMRQLKETGWMHNRLRMVTASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K DP G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTGKFI 401
>gi|228940236|ref|ZP_04102807.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228973152|ref|ZP_04133742.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228979734|ref|ZP_04140058.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis Bt407]
gi|384187171|ref|YP_005573067.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410675484|ref|YP_006927855.1| deoxyribodipyrimidine photo-lyase Phr [Bacillus thuringiensis
Bt407]
gi|452199537|ref|YP_007479618.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228780047|gb|EEM28290.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis Bt407]
gi|228786555|gb|EEM34544.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228819362|gb|EEM65416.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326940880|gb|AEA16776.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409174613|gb|AFV18918.1| deoxyribodipyrimidine photo-lyase Phr [Bacillus thuringiensis
Bt407]
gi|452104930|gb|AGG01870.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 476
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 111/227 (48%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W E A + ++ K S GR P S+LA P+L FG +S +L +H
Sbjct: 197 WDPTEEGAYKTFKKFFSSKLVSYSEGRDFPDQNVHSMLA------PYLSFGQISVKLMFH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PW+
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYRPLNKSFENFPWNKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F +
Sbjct: 309 EELLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|120609600|ref|YP_969278.1| deoxyribodipyrimidine photo-lyase type I [Acidovorax citrulli
AAC00-1]
gi|120588064|gb|ABM31504.1| deoxyribodipyrimidine photo-lyase type I [Acidovorax citrulli
AAC00-1]
Length = 493
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 118/251 (47%), Gaps = 23/251 (9%)
Query: 69 EKYGVPTLEELGFDIEGL----LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
E+ GVP L ++GF+ GL LPP G A L+ L+R + +G + P
Sbjct: 191 ERGGVPALADIGFEPAGLDRLPLPPGMDG----ARALLDDFLQR---IDQYGEARDFPA- 242
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL-HGQLLWREFFYCAATRN 183
+ + LS LRFG LS R ++R+++ + +L+WR+F++ +
Sbjct: 243 -VKGPSYLSVHLRFGTLSPRRA---ARAAHERMRQGSTGAATWLNELIWRDFYFQVLAHH 298
Query: 184 PNFDRMLG-NPICVQIPWDVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
P P I W+ +A A W +TG+P +DA M Q+ G++H+ R
Sbjct: 299 PQVAGGASFKPAYDAIAWEDGPQARERFAAWCEGRTGYPLVDAAMAQINRTGYMHNRLRM 358
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKF 298
VA FL + DL V W G + F E L D D S N G W W S S Q +F + PV
Sbjct: 359 VVASFLVK-DLGVDWRWGERYFAEKLNDFDLSANNGGWQWASSSGCDAQPYFRIFNPVSQ 417
Query: 299 GRKADPNGDFI 309
RK DP G FI
Sbjct: 418 SRKFDPKGRFI 428
>gi|323137318|ref|ZP_08072396.1| DNA photolyase, FAD-binding [Methylocystis sp. ATCC 49242]
gi|322397305|gb|EFX99828.1| DNA photolyase, FAD-binding [Methylocystis sp. ATCC 49242]
Length = 472
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 122/268 (45%), Gaps = 19/268 (7%)
Query: 47 AEAPVTPLLVRQATT----PLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRL 102
AEAP PL + T P D + +PT D G L TW+ GE A+ RL
Sbjct: 159 AEAPDAPLPAPKKLTAAPPPASDALADWRLLPTKP----DWAGGLRETWRAGEHAALERL 214
Query: 103 ERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPP 162
+++ R M + + + +SP L FG +S R + ++ + A
Sbjct: 215 AEFAKKRVRDYKIDRDFMAREGV----SRMSPHLHFGEVSPRRIWAEITEAAGDAGAA-- 268
Query: 163 PLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDA 222
++ WREF + NP + PW + AL W QTG+P +DA
Sbjct: 269 ---YLREIGWREFCHHLLVANPQMPERALDERFRDFPWREDAAALEAWRRGQTGYPLVDA 325
Query: 223 IMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS- 281
M +L G +H+ AR A FL + L + W+EG + F + L+DAD + N+G W W++
Sbjct: 326 AMRELWITGNMHNRARMVAASFLVK-HLLIPWQEGERWFWDTLVDADLANNSGGWQWVAG 384
Query: 282 CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
C + +F + PV G K DP GD++
Sbjct: 385 CGADAAPYFRVFNPVLQGEKFDPEGDYL 412
>gi|363422380|ref|ZP_09310456.1| deoxyribodipyrimidine photo-lyase [Rhodococcus pyridinivorans AK37]
gi|359732979|gb|EHK81983.1| deoxyribodipyrimidine photo-lyase [Rhodococcus pyridinivorans AK37]
Length = 461
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 107/229 (46%), Gaps = 22/229 (9%)
Query: 89 PTWKGGETEAMRR----LERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTR 144
PT GE A+ R L+ LER + RP +GLSP+L+FGC+ R
Sbjct: 196 PTPPPGEAAALERWREFLDDGLER--YATDRDRPAYD------GTSGLSPYLKFGCIHPR 247
Query: 145 LFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNM 204
HD+ R + ++ +L WR+F+ + P R N I +D
Sbjct: 248 TLLHDM-----RNRSDEGAVTFRSELAWRDFYADVLFQRPETARTNYNSDFDAITYDSGP 302
Query: 205 EA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
+A A W +TGFP +DA M QL EG +H+ R VA FLT+ DL + W G + F
Sbjct: 303 DADALFAAWCEGRTGFPIVDAGMRQLLAEGVMHNRVRMIVASFLTK-DLHLPWWRGARHF 361
Query: 262 DELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ L+D D N W W + S + +F + P + G K DP G+++
Sbjct: 362 MKHLVDGDLVSNQHNWQWTAGSGTDAAPYFRVFNPTRQGEKFDPTGEYV 410
>gi|440229885|ref|YP_007343678.1| deoxyribodipyrimidine photolyase [Serratia marcescens FGI94]
gi|440051590|gb|AGB81493.1| deoxyribodipyrimidine photolyase [Serratia marcescens FGI94]
Length = 476
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 106/222 (47%), Gaps = 13/222 (5%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE A+RRL + V + + + P L + +GLSP+L G LS R ++ L
Sbjct: 205 GEEHALRRLRAFCREQ--VEDYRQQRDFPA--LDATSGLSPYLALGVLSPRQCFNRLRLT 260
Query: 154 YKRIKKAPPPLSLH--GQLLWREFFYCAATRNPNFDR---MLGNPICVQIPWDVNMEALA 208
+ P + +L+WREF+ +P R +G V+ W+ + EAL
Sbjct: 261 CPDLLTQPESGAFTWLNELIWREFYRHLLVAHPALCRHRPFIGWTDAVR--WNPDAEALQ 318
Query: 209 KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDA 268
W +TG+P +DA M QL GW+H+ R VA FL + DL + W G + F LLD
Sbjct: 319 AWQQGRTGYPIVDAAMRQLNHTGWMHNRLRMIVASFLVK-DLLIDWRAGERYFMRQLLDG 377
Query: 269 DWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
D++ N G W W S + +F + P G + DP G FI
Sbjct: 378 DFAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGAFI 419
>gi|423458833|ref|ZP_17435630.1| hypothetical protein IEI_01973 [Bacillus cereus BAG5X2-1]
gi|401145461|gb|EJQ52985.1| hypothetical protein IEI_01973 [Bacillus cereus BAG5X2-1]
Length = 476
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 135/299 (45%), Gaps = 24/299 (8%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEE 78
II+K + F + K + P P + ++ P E + +PT+
Sbjct: 132 IIKKKDNTEYKVFTPFYNAFQKQEIPKPISK--VQRIKGGSSLPASLSVSELHLLPTIPW 189
Query: 79 LGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFL 136
IE + PT +G A + ++ K S GR P S+LA P+L
Sbjct: 190 TS-HIESIWEPTEEG----AYKACKKFFSSKLASYSEGRDFPNQNAHSMLA------PYL 238
Query: 137 RFGCLSTRLFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
FG +S R YH L NK +R +K S Q +WREF Y P
Sbjct: 239 SFGQISVRWMYHYLINKSTERQCSLFEKQVN--SFIRQFIWREFSYYLLYHYPFTVYKPL 296
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
N PW+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L
Sbjct: 297 NKSFEHFPWNNEEELLTVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLL 355
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ W+EG K F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 356 IPWQEGAKWFLDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|365538417|ref|ZP_09363592.1| deoxyribodipyrimidine photolyase [Vibrio ordalii ATCC 33509]
Length = 470
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 6/217 (2%)
Query: 95 ETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLY 154
E +A+R R R V ++ + + P L S + LSP+L G LS R L
Sbjct: 205 EFDAIRAKLRQFCRDK-VQNYHQQRDFP--ALDSTSALSPYLATGALSARQCMARLYAES 261
Query: 155 KRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNMEALAKWANA 213
+ I + + +++WREF+ P+ + P + W N A +W
Sbjct: 262 QHIGLSEGAQTWLSEIIWREFYQHLIGFRPDLCKGKDFAPWGKYVSWWENSTAFERWQQG 321
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
QTGFP +DA M QL + GW+H+ R VA FLT+ DL + W G + F + L+D D++ N
Sbjct: 322 QTGFPIVDAAMRQLNKTGWMHNRLRMVVASFLTK-DLHIDWRLGEQYFMQTLVDGDYASN 380
Query: 274 AGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
G W W + + Q +F + P G + DP GDFI
Sbjct: 381 NGGWQWCASTGCDGQPYFRIFNPTSQGERFDPKGDFI 417
>gi|448583039|ref|ZP_21646508.1| deoxyribodipyrimidine photolyase [Haloferax gibbonsii ATCC 33959]
gi|445729996|gb|ELZ81588.1| deoxyribodipyrimidine photolyase [Haloferax gibbonsii ATCC 33959]
Length = 482
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 121/300 (40%), Gaps = 17/300 (5%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT--TPLRDDHDEKYGV---- 73
I N G T Y F D P P P L T T D ++ V
Sbjct: 132 ITTNAGDTYSVYTYFWKKWRDRDKPEPYPEPDADDLADANTLETAAEALADAEFDVAAGD 191
Query: 74 -PTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
PT+ +LGF E G A RL + + R T + + L
Sbjct: 192 LPTMSDLGF--EEPSAAVQSAGTEAARERLSAFCADAIYRYADDRDYPTRDAT----SRL 245
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRML 190
S L+FG + R Y + + ++ QL WREF+ +PN
Sbjct: 246 STDLKFGTIGIREVYAATAAAREGVGGERDESVEEFQSQLAWREFYAHVLREHPNVVTEN 305
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
I W + E LA W +TG+P +DA M QLREE ++H+ R VA FLT+ DL
Sbjct: 306 YKEYENDIAWRDDAEELAAWKEGKTGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK-DL 364
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F E L D D + + G W W S + Q +F + P+ G + DP+G++I
Sbjct: 365 LCDWRHGYAHFREHLADHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDGEYI 424
>gi|229046850|ref|ZP_04192484.1| Deoxyribodipyrimidine photolyase [Bacillus cereus AH676]
gi|229110596|ref|ZP_04240162.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock1-15]
gi|423586430|ref|ZP_17562517.1| hypothetical protein IIE_01842 [Bacillus cereus VD045]
gi|228672847|gb|EEL28125.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock1-15]
gi|228724483|gb|EEL75806.1| Deoxyribodipyrimidine photolyase [Bacillus cereus AH676]
gi|401229948|gb|EJR36456.1| hypothetical protein IIE_01842 [Bacillus cereus VD045]
Length = 476
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 111/227 (48%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W E A + ++ K S GR P S+LA P+L FG +S +L +H
Sbjct: 197 WDPTEEGAYKTFKKFFSSKLVSYSEGRDFPGQNVHSMLA------PYLSFGQISVKLMFH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PW+
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFEHFPWNKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F +
Sbjct: 309 EELLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|228934418|ref|ZP_04097254.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228825271|gb|EEM71067.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 476
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 111/235 (47%), Gaps = 25/235 (10%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTCKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NK--------LYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
L YH L NK K++ S QL+WREF Y P N
Sbjct: 247 LIYHYLINKSTESQCSLFEKQVN------SFIRQLIWREFSYYLLYHYPFTAYKPLNKSF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W +TG+P+IDA M +L + G++H+ R AVA FL + L + W+
Sbjct: 301 EHFPWNNEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRTRMAVASFLIK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 360 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|161522875|ref|YP_001585804.1| deoxyribodipyrimidine photo-lyase [Burkholderia multivorans ATCC
17616]
gi|189348291|ref|YP_001941487.1| deoxyribodipyrimidine photo lyase [Burkholderia multivorans ATCC
17616]
gi|160346428|gb|ABX19512.1| Deoxyribodipyrimidine photo-lyase [Burkholderia multivorans ATCC
17616]
gi|189338429|dbj|BAG47497.1| deoxyribodipyrimidine photo lyase [Burkholderia multivorans ATCC
17616]
Length = 505
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 123/263 (46%), Gaps = 31/263 (11%)
Query: 67 HDEKYGVPTLEELGF-----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMT 121
H+ V TL LG D L TW+ GE A +RL+ LE + + +
Sbjct: 188 HNVTPHVCTLRALGLQPTAPDWASGLRLTWRCGEEAARQRLDAFLEHS--LRDYADMRDL 245
Query: 122 PQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLY---KRIKKAP-------PPLSLHGQLL 171
P + S+ LSP+LRFG +S R ++ + +R +KA P ++
Sbjct: 246 PAAHATSR--LSPYLRFGNISVRQVWYAASSAASAMQRTRKADLGDPQSGPLNKFLSEIG 303
Query: 172 WREFFYCAATRNP-----NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQ 226
WREF Y P NF R + +PW + AL KW TG+P +DA M +
Sbjct: 304 WREFSYHLLYHFPPLHQVNFRRQFDS-----MPWRDDPNALRKWQTGHTGYPLVDAGMRE 358
Query: 227 LREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SF 285
L GW+H+ R VA FL++ L + W EG F + L+DAD + N W W+S S +
Sbjct: 359 LWHTGWMHNRVRMVVASFLSK-HLLIDWREGEAWFWDTLVDADEASNPASWQWVSGSGAD 417
Query: 286 FQQFFHCYCPVKFGRKADPNGDF 308
+F + PV G+K DP G++
Sbjct: 418 AAPYFRIFNPVLQGQKFDPQGEY 440
>gi|113477930|ref|YP_723991.1| deoxyribodipyrimidine photo-lyase type I [Trichodesmium erythraeum
IMS101]
gi|110168978|gb|ABG53518.1| Deoxyribodipyrimidine photo-lyase type I [Trichodesmium erythraeum
IMS101]
Length = 498
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 123/245 (50%), Gaps = 15/245 (6%)
Query: 73 VPTLEELGF-----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+PTL +L + +G+L +KGGET A R++ + ++ ++ + K T +L
Sbjct: 189 LPTLSDLNLEKPPLNSQGVL--EFKGGETAAKERVKNYFWQQDYLKVY---KETRNGMLG 243
Query: 128 SQ--TGLSPFLRFGCLSTRLFYHDLNKL-YKRIKKAPPPLSLHGQLLWREFFYCAATRNP 184
+ + SP+L GCLS R Y ++ + Y+R+K L +L+WR++F ++
Sbjct: 244 ANYSSKFSPWLALGCLSPRYIYEEVKEYEYQRVKNQST-YWLIFELIWRDYFRFICQKHG 302
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
N + IPW + E KW QTGFP +DA M +L G++ + R VA F
Sbjct: 303 NKIFHKSGLQGIAIPWQEDWEKFRKWQAGQTGFPLVDANMRELLATGFMSNRGRQNVASF 362
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADP 304
LT+ +L ++W+ G + F+ LL+D D N G W + + + F + K + DP
Sbjct: 363 LTK-NLGINWQMGAEWFESLLIDYDVCSNWGNWNYTAGVGNDGRGFRYFNIPKQAKDYDP 421
Query: 305 NGDFI 309
G ++
Sbjct: 422 EGKYV 426
>gi|392553658|ref|ZP_10300795.1| deoxyribodipyrimidine photolyase [Pseudoalteromonas spongiae
UST010723-006]
Length = 467
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 13/214 (6%)
Query: 102 LERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-- 159
L R L K V + R + P + +G+SP+L G +S + +DL Y I +
Sbjct: 205 LPRFLNDK--VIDYARDRDFPA--IKGTSGISPYLTIGAISPKRVLYDLLSYYPHILEDV 260
Query: 160 APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ-IPWDVNMEALAKWANAQTGFP 218
P + +L+WREF+ PN +++ + W + W A+TGFP
Sbjct: 261 KAPIFTWLNELIWREFYRNVLLSFPNLNKLHDFQGKFKGFDWPNDHAKFTAWCEAKTGFP 320
Query: 219 WIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWM 278
+DA M QL++ GW+H+ R VA FLT+ L V W G F + L+D D + N+G W
Sbjct: 321 IVDAAMRQLKQTGWMHNRLRMIVASFLTKH-LLVDWRLGEAFFMQHLIDGDLAANSGGWQ 379
Query: 279 WLS---CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W + C + Q +F + P+ K DP+G FI
Sbjct: 380 WAAGTGCDA--QPYFRIFNPITQSEKFDPDGSFI 411
>gi|389686026|ref|ZP_10177349.1| deoxyribodipyrimidine photolyase [Pseudomonas chlororaphis O6]
gi|388550368|gb|EIM13638.1| deoxyribodipyrimidine photolyase [Pseudomonas chlororaphis O6]
Length = 481
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 107/235 (45%), Gaps = 10/235 (4%)
Query: 80 GFDIEG-LLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
GF G L W GET A +RL E + + + + P SQ LSP+L
Sbjct: 190 GFPTPGPHLQALWPAGETAAQQRLAHFAETQ--LVHYQAERDLPAKPGTSQ--LSPYLAA 245
Query: 139 GCLSTRLFYHDL--NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPIC 195
G LS R H N + +P ++ +LLWREF+ P R P
Sbjct: 246 GVLSPRQCLHAALQNNRGEFASGSPGAVTWINELLWREFYKHILVGYPRVSRHRAFRPET 305
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
+ W + LA W A+TG P IDA M QL E GW+H+ R VA FLT+ +L + W
Sbjct: 306 EAVAWRDAPDELAAWQQARTGLPIIDAAMRQLLETGWMHNRLRMIVAMFLTK-NLLIDWR 364
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
+G + F L+D D + N G W W S + +F + P+ ++ D G FI
Sbjct: 365 QGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSQRFDSQGTFI 419
>gi|434399467|ref|YP_007133471.1| cryptochrome, DASH family [Stanieria cyanosphaera PCC 7437]
gi|428270564|gb|AFZ36505.1| cryptochrome, DASH family [Stanieria cyanosphaera PCC 7437]
Length = 488
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 26/273 (9%)
Query: 44 PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELG-----FDIEGLLPPTWKGGETEA 98
P+P E P P + E +P + +LG FD +L +KGGETEA
Sbjct: 173 PTPKELPSLPSI-------------ELGQIPQISDLGLTTPIFDKRAVL--NFKGGETEA 217
Query: 99 MRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFGCLSTRLFYHDLNKLYKR 156
+ RL ++ + + + K T +L + + SP+L GC+S R Y + K +
Sbjct: 218 LTRLNQYFWQLDCLKEY---KETRNGMLGANYSSKFSPWLARGCISPRYIYEQVQKYETK 274
Query: 157 IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTG 216
K L +L+WR+FF+ ++ N + IPW + + W +TG
Sbjct: 275 RIKNDSTYWLIFELIWRDFFHFICAKHGNKIFYQSGLQGIDIPWKEDWKRFNLWQEGKTG 334
Query: 217 FPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGM 276
+P +DA M +L G++ + R VA FLT+ +L ++W+ G + F+ LL+D D N G
Sbjct: 335 YPLVDANMRELAATGFMSNRGRQNVASFLTK-NLGINWQIGAEWFESLLVDYDVCSNWGN 393
Query: 277 WMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W + + + F + K + DP GD++
Sbjct: 394 WNYTAGVGNDARGFRYFNIPKQSKYYDPKGDYL 426
>gi|42782239|ref|NP_979486.1| deoxyribodipyrimidine photolyase [Bacillus cereus ATCC 10987]
gi|42738164|gb|AAS42094.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
ATCC 10987]
Length = 476
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 115/235 (48%), Gaps = 21/235 (8%)
Query: 83 IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGC 140
IE + PT +G A + ++ K S GR P S+LA P+L FG
Sbjct: 193 IESIWDPTEEG----AYKTCKKFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQ 242
Query: 141 LSTRLFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
+S R YH L NK +R +K S QL+WREF Y P N
Sbjct: 243 ISVRWMYHYLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKNF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+
Sbjct: 301 EHFPWNNEEELLTVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 360 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 414
>gi|209559671|ref|YP_002286143.1| deoxyribodipyrimidine photolyase [Streptococcus pyogenes NZ131]
gi|209540872|gb|ACI61448.1| Putative deoxyribodipyrimidine photolyase [Streptococcus pyogenes
NZ131]
Length = 469
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 97 EAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
EA ++L R ++ + +A++ + P L S+ LSPFLR G + R YH
Sbjct: 200 EASKQLNRFIQDQ--LAAYHANRDFPAQLGTSR--LSPFLRIGAIGIRTVYH-------A 248
Query: 157 IKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANA 213
+++AP L + +L WR+F+ P+ QI W N + W
Sbjct: 249 VRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPDWFQLWKEG 308
Query: 214 QTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVN 273
+TG+P +DA M QL++ GW+H+ R VA FLT+ DL G + F + L+D D + N
Sbjct: 309 KTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK-DLLCDGRLGEQYFQQQLIDYDAASN 367
Query: 274 AGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + PV G++ DP G+FI
Sbjct: 368 IGGWQWAASTGTDAVPYFRIFNPVTQGKRFDPKGEFI 404
>gi|428213636|ref|YP_007086780.1| deoxyribodipyrimidine photolyase [Oscillatoria acuminata PCC 6304]
gi|428002017|gb|AFY82860.1| deoxyribodipyrimidine photolyase [Oscillatoria acuminata PCC 6304]
Length = 479
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 14/251 (5%)
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMT 121
R + + +PTL++LG + P + GE+ A +LE +R + R P +
Sbjct: 181 RAKNAGEVALPTLKDLGLSWDN--PLMLEPGESAARSQLEEFSDRTIYDYDEQRNFPAVP 238
Query: 122 PQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYC 178
SLL S L+FG + R ++ ++ + + +L WREF+
Sbjct: 239 GTSLL------SAALKFGAIGIRTVWNATLNAAEQCRSDETRKGVQTWQQELAWREFYQQ 292
Query: 179 AATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
A P PW+ N E W QTG+P +DA M QL E GW+H+ R
Sbjct: 293 ALYHFPELATGPYRDTWKDFPWENNEELFHAWCQGQTGYPIVDAAMRQLNETGWMHNRCR 352
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKF 298
VA FLT+ DL ++W+ G + F + L D D + N G W W + S + + P
Sbjct: 353 MIVASFLTK-DLIINWQWGEQYFMQKLYDGDLAANNGGWQWSASSGMDPKPLRIFNPTTQ 411
Query: 299 GRKADPNGDFI 309
+K DP GD+I
Sbjct: 412 TQKFDPEGDYI 422
>gi|121997706|ref|YP_001002493.1| deoxyribodipyrimidine photo-lyase [Halorhodospira halophila SL1]
gi|121589111|gb|ABM61691.1| Deoxyribodipyrimidine photo-lyase [Halorhodospira halophila SL1]
Length = 477
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 109/227 (48%), Gaps = 9/227 (3%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLF 146
L P W+ G A +RLER L+ ++G + P S+ LSP L FG +S R
Sbjct: 197 LAPCWQPGAAGAQQRLERFLDGAG--PAYGERRDFPAQPGTSR--LSPHLHFGEISIRAV 252
Query: 147 YHDLNKLYKRIKKAPPPL-SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW--DVN 203
+H + + A L + +L WREF Y + P R + + PW D +
Sbjct: 253 WHAVRDAQQMQPAAADALDTFLAELGWREFAYHLLWQQPELHRTPIDERFSRFPWREDPD 312
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
L W TG P +DA M +L GW+H+ R V FL + +L + W+ G F +
Sbjct: 313 GALLDAWRRGATGIPLVDAGMRELWATGWMHNRVRMVVGSFLVK-NLRLPWQHGEAHFRD 371
Query: 264 LLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L+D D + N+ W W+S C + +F + PV+ G + DP+GD++
Sbjct: 372 TLVDWDLASNSMGWQWVSGCGADAAPYFRIFNPVRQGERFDPDGDYV 418
>gi|452959038|gb|EME64379.1| deoxyribodipyrimidine photo-lyase [Rhodococcus ruber BKS 20-38]
Length = 454
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 117/249 (46%), Gaps = 22/249 (8%)
Query: 66 DHDEKYGVPTLEELGFDIEGL-LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS 124
D D + +P + D++G LPP GE A+ R H R + + + P
Sbjct: 172 DLDARVAIPADD----DLDGTTLPPA---GEAAALHRW--HEFRDDDLPHYDTDRDRPD- 221
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNP 184
L + LSP+L+FGC+ R HD+ R ++ L +L WR+F+ P
Sbjct: 222 -LDRTSRLSPYLKFGCIHPRTLLHDV-----RSDRSAGANRLRSELAWRDFYADVLHHRP 275
Query: 185 NFDRMLGNPICVQIPWDVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
+ R N I +D +A A W +TGFP +DA M QL EGW+H+ R V
Sbjct: 276 DTARRNYNRRFDDIAYDSGPDAERNFAAWQQGRTGFPIVDAGMRQLLAEGWMHNRLRMIV 335
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGR 300
A FL + DL + W G + F + L+D D + N W W + S + +F + P+ G
Sbjct: 336 ASFLAK-DLHLPWWWGARHFMDRLVDGDLASNQHGWQWTAGSGTDAAPYFRVFNPITQGE 394
Query: 301 KADPNGDFI 309
K DP G+++
Sbjct: 395 KFDPTGEYV 403
>gi|145588429|ref|YP_001155026.1| deoxyribodipyrimidine photo-lyase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145046835|gb|ABP33462.1| deoxyribodipyrimidine photo-lyase type I [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 492
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 117/246 (47%), Gaps = 22/246 (8%)
Query: 73 VPTLEELGF---DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ 129
+PTLE +GF IE LPP +GG+ LE L R + + + P +
Sbjct: 196 IPTLESMGFCKTGIEAYLPPGAEGGQA----FLEDFLPR---IDQYQVGRDFPA--IKGV 246
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL-HGQLLWREFFYCAATRNPNFDR 188
+ LS LRFG LS R + + ++R+ ++ +L+WR+F++ +P +
Sbjct: 247 SYLSTHLRFGMLSIRGL---VREAHRRMLAGSMGATIWLSELIWRDFYFMILANHPRLAK 303
Query: 189 MLG-NPICVQIPWD---VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
P I W+ V + A W +TG+P +DA M QL + G++H+ R VA F
Sbjct: 304 GASFKPDYDNIVWEQGSVAKKLFAAWCEGKTGYPLVDAAMHQLNQSGYMHNRLRMVVASF 363
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL V W G F E L D + S N G W W S S Q +F + P+ K D
Sbjct: 364 LTK-DLGVDWRWGEAYFAEHLNDFELSSNNGGWQWASSSGCDAQPYFRIFNPITQSEKFD 422
Query: 304 PNGDFI 309
P G FI
Sbjct: 423 PEGKFI 428
>gi|393796398|ref|ZP_10379762.1| deoxyribodipyrimidine photo-lyase [Candidatus Nitrosoarchaeum
limnia BG20]
Length = 318
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 20/222 (9%)
Query: 92 KGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLN 151
+GG A++ L+ E K + + P L T LS +RFG +S R
Sbjct: 63 EGGRRNALKILKNISEYKNYQKTRDYPG------LDKTTKLSAHIRFGTISVR------- 109
Query: 152 KLYKRIKKA-PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
+ Y+ IK+ L QL WREFF PN +IPW N + W
Sbjct: 110 EAYQAIKENLGIDHILINQLYWREFFTYVLHHFPNSKSETFKKKFRKIPWSTNKQEYHTW 169
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
+TGFP +DA M QL + G++H+ R VA FLT+ D+ + W+ G + F E L+D D
Sbjct: 170 CKGETGFPIVDAGMRQLNKTGFMHNRVRMIVASFLTK-DMHIDWKLGERYFAEKLVDYDP 228
Query: 271 SVNAGMWMWLS---CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+VNAG W W + C + Q+F + P K D N ++I
Sbjct: 229 AVNAGNWQWAASTGCDAV--QYFRIFNPWIQQEKFDSNCNYI 268
>gi|448546468|ref|ZP_21626632.1| deoxyribodipyrimidine photolyase [Haloferax sp. ATCC BAA-646]
gi|448548505|ref|ZP_21627724.1| deoxyribodipyrimidine photolyase [Haloferax sp. ATCC BAA-645]
gi|448557855|ref|ZP_21632841.1| deoxyribodipyrimidine photolyase [Haloferax sp. ATCC BAA-644]
gi|445702921|gb|ELZ54861.1| deoxyribodipyrimidine photolyase [Haloferax sp. ATCC BAA-646]
gi|445713992|gb|ELZ65763.1| deoxyribodipyrimidine photolyase [Haloferax sp. ATCC BAA-644]
gi|445714263|gb|ELZ66028.1| deoxyribodipyrimidine photolyase [Haloferax sp. ATCC BAA-645]
Length = 484
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 123/302 (40%), Gaps = 19/302 (6%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR----DDHDEKY---- 71
I N G T Y F D P P P L AT D D ++
Sbjct: 132 ITTNAGDTYSVYTYFWKKWRDRDKPDPYPEPDADDLADAATLETAAESLSDADAEFDIAV 191
Query: 72 -GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
G+PT+ +LGF E G A RL + + R T + +
Sbjct: 192 GGLPTISDLGF--EEPSASVRSAGTEAARERLSAFCADAIYRYADDRDYPTRDAT----S 245
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDR 188
LS L+FG + R Y + + ++ QL WREF+ +PN
Sbjct: 246 RLSTDLKFGTIGIREVYAATAAAREGVGGERDESVEEFQSQLAWREFYAHVLREHPNVVT 305
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
I W + E LA W +TG+P +DA M QLREE ++H+ R VA FLT+
Sbjct: 306 ENYKEYENDIAWRDDDEELAAWKAGETGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK- 364
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL W G F E L D D + + G W W S + Q +F + P+ G + DP+G+
Sbjct: 365 DLLCDWRHGYAHFREHLADHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDGE 424
Query: 308 FI 309
+I
Sbjct: 425 YI 426
>gi|172058000|ref|YP_001814460.1| deoxyribodipyrimidine photo-lyase [Exiguobacterium sibiricum
255-15]
gi|171990521|gb|ACB61443.1| Deoxyribodipyrimidine photo-lyase [Exiguobacterium sibiricum
255-15]
Length = 451
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 94 GETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLN 151
GE A +RL L+ A+ P + SL+ S +LR G + R + +
Sbjct: 197 GEETARKRLRSFLKNNLSAYEEQRDLPAVDGTSLM------SRYLRTGEIGIRTIFDAV- 249
Query: 152 KLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWA 211
++ + + + +L+WREF+Y P R+ N +I W+ + + WA
Sbjct: 250 ---QQEQDSKGKQTYLTELIWREFYYTILMHYPESKRLPVNEQYTKIEWETDEKGFKAWA 306
Query: 212 NAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWS 271
+TG+P +DA M QL GW+H+ R VA FLT+ DL V W++G + F + L+D + +
Sbjct: 307 EGKTGYPIVDAAMRQLNTTGWMHNRLRMIVASFLTK-DLLVDWQKGERYFQQKLVDYEAA 365
Query: 272 VNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
N G W W S + +F + P +K D +G FI
Sbjct: 366 SNIGGWQWAASVGTDAVPYFRVFNPTTQSKKFDKDGTFI 404
>gi|408673564|ref|YP_006873312.1| cryptochrome, DASH family [Emticicia oligotrophica DSM 17448]
gi|387855188|gb|AFK03285.1| cryptochrome, DASH family [Emticicia oligotrophica DSM 17448]
Length = 475
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 60 TTPLRDDHDEKYGVPTLEELG-----FDIEGLLPPTWKGGETEAMRRLERHLERKAWVAS 114
T P D + +PTLE LG FD +L ++GGET A+ RL+ ++ K +
Sbjct: 174 TLPKVDKSVDLGEMPTLESLGYEKPKFDKRSVL--AFRGGETSALYRLDEYIWDKDLPKT 231
Query: 115 FGRPKMTPQSLLASQ--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLW 172
+ K T L+ T S +L GC+S R Y ++ K K ++ + +L+W
Sbjct: 232 Y---KETRNGLVGGDYSTKFSAWLSLGCISPRTIYEEVKKYEKEVEANESTYWIIFELIW 288
Query: 173 REFFYCAATR-NPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEG 231
R++F+ A + + G + W N E KW N +TG P+IDA M +L+ G
Sbjct: 289 RDYFHFIALKFGTRIFKQSGVKNDLMKQWKRNQEVFEKWKNGETGVPFIDANMKELKLTG 348
Query: 232 WIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS 281
++ + R VACFL++ DL + W G F+ L+D D N G W +++
Sbjct: 349 FMSNRGRQNVACFLSK-DLGIDWTWGAAYFESQLIDYDVCSNWGNWNYVA 397
>gi|218245570|ref|YP_002370941.1| DASH family cryptochrome [Cyanothece sp. PCC 8801]
gi|218166048|gb|ACK64785.1| cryptochrome, DASH family [Cyanothece sp. PCC 8801]
Length = 488
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 13/245 (5%)
Query: 72 GVPTLEELG-----FDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
+PTL ELG FD G+L + GGE+E ++RL ++ +K + + K T +L
Sbjct: 190 NIPTLAELGLETPEFDSRGVL--EFIGGESEGIKRLNQYFWQKNRLKDY---KETRNEML 244
Query: 127 ASQ--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNP 184
S + SP+L GCLS R Y ++ K K L +LLWR++F ++
Sbjct: 245 GSDYSSKFSPWLALGCLSPRYIYEEVTKYELERVKNDSTYWLIFELLWRDYFRFICAKHG 304
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
N + +PW + + W TG+P +DA M +L G++ + R VA F
Sbjct: 305 NKVFYSSGLQGLNLPWKEDWQRFQLWQTGNTGYPLVDANMRELAATGFMSNRGRQNVASF 364
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADP 304
LT+ +L ++W G + F+ +L+D D N G W + + + F + K + DP
Sbjct: 365 LTK-NLGINWLMGAEWFESVLIDYDVCSNYGNWNYTAGVGNDARGFRYFNIPKQSKDYDP 423
Query: 305 NGDFI 309
G+++
Sbjct: 424 KGNYL 428
>gi|443328462|ref|ZP_21057059.1| deoxyribodipyrimidine photolyase [Xenococcus sp. PCC 7305]
gi|442791916|gb|ELS01406.1| deoxyribodipyrimidine photolyase [Xenococcus sp. PCC 7305]
Length = 474
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 14/242 (5%)
Query: 73 VPTLEELGFDIEG--LLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+PT E+LG+ E LL P GET A RLE + + + + P +
Sbjct: 190 LPTAEDLGYSWETPLLLAP----GETAAQARLEEF--SHSAIYQYDEQRNFP--FNQGTS 241
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFD 187
LS L+FG +S R + + + + +++ +L WREF+ P +
Sbjct: 242 LLSAALKFGVISLRAIWQTTVEALENCRSEEARVNVITWQKELAWREFYQHCLYFFPELE 301
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
+ P PWD N E W +TG+P +DA M QL+ GW+H+ R VA FLT+
Sbjct: 302 QGPYRPAFKNFPWDNNPEHFQAWCQGKTGYPIVDAAMRQLQSTGWMHNRCRMIVASFLTK 361
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G K F + L D D + N G W W + S + + P +K D +
Sbjct: 362 -DLIIDWRWGEKYFMQTLFDGDLASNNGGWQWSASSGMDPKPLRIFNPASQAQKFDSEAE 420
Query: 308 FI 309
+I
Sbjct: 421 YI 422
>gi|392573131|gb|EIW66272.1| hypothetical protein TREMEDRAFT_35180, partial [Tremella
mesenterica DSM 1558]
Length = 547
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 139/333 (41%), Gaps = 41/333 (12%)
Query: 11 LSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPL------LVRQATTPLR 64
L +P R I GK + +Q AK+ P V+PL VRQ PL+
Sbjct: 164 LVVPPGR--ITSQAGKPMSVFSPWQRQWAKLLEKEPNLLEVSPLPQGNDPSVRQG--PLK 219
Query: 65 DDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFG-------- 116
D D +++ + + LL W G A + L+R L KA F
Sbjct: 220 DLFDATSVPEDIKDFVPEDKHLLKECWPEGTDAARQLLDRFLHTKARKKQFQLVSPLTEG 279
Query: 117 ----------RPKMTPQSLLASQTG--LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPL 164
R ++L+ LSP+L G +S R+ ++ KL K +
Sbjct: 280 AEEDDKHSRVREYQDGRNLVDGDNSSRLSPYLALGVISGRMVLNEAAKLGKGKRLESGRD 339
Query: 165 SLHG----QLLWREFFYCAATRNPNFDRMLGNPIC---VQIPWDVNMEALAKWANAQTGF 217
+ G ++ WR+F+ R P +G P + W++N E L W + +TG+
Sbjct: 340 TGVGMWVQEVSWRDFYNHVMARCPRVS--MGRPFLEKFADVQWEINEENLQAWKDGKTGY 397
Query: 218 PWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMW 277
P +DA M + GW+ + R ACFL + L + W G K F E +D D + N G W
Sbjct: 398 PIVDAAMRACKARGWMENRVRMVSACFLVKS-LLLDWRLGEKYFMESFIDGDLAANNGGW 456
Query: 278 MWL-SCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W S + Q +F + + +K DPNGD+I
Sbjct: 457 QWTASTGTDPQPYFRIFNTLTQSQKCDPNGDYI 489
>gi|325568101|ref|ZP_08144542.1| deoxyribodipyrimidine photolyase [Enterococcus casseliflavus ATCC
12755]
gi|325158302|gb|EGC70453.1| deoxyribodipyrimidine photolyase [Enterococcus casseliflavus ATCC
12755]
Length = 473
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 16/220 (7%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE A ++L+ ++++ +A++ + + P + + LSPFL FG +S R K+
Sbjct: 206 GEDYAHKQLQAFVQKR--LAAYEKDRDLPS--IKGTSRLSPFLSFGQISIR-------KV 254
Query: 154 YKRIKKAPPPL---SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
+ + PP + +L WR+F++ +P + W + EA KW
Sbjct: 255 WAACQGMPPSTGKATFLKELAWRDFYHMIYFTHPEQKNYELIEKYRNMDWQKDEEAFNKW 314
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
QTG+P IDA M QL + GW+H+ R VA FLT+ DL + W +G F L+D D
Sbjct: 315 QAGQTGYPIIDAAMRQLNQTGWMHNRLRMIVASFLTK-DLLIDWRQGEAYFARQLIDYDA 373
Query: 271 SVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G W W S + +F + P+ G+K D G +I
Sbjct: 374 ASNIGGWQWAASTGTDAVPYFRIFNPITQGKKFDKEGTYI 413
>gi|228915743|ref|ZP_04079325.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228843918|gb|EEM88985.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 476
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTFKKFFSSKLVSYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDLNKLYKRIKKAPPPL-----SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L YH L + K +K S Q +WREF Y P N P
Sbjct: 247 LIYHYL--INKSNEKQCSLFEQQVNSFIRQFIWREFSYYLLYHYPFTVNKPLNKNFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNNEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 414
>gi|385680952|ref|ZP_10054880.1| deoxyribodipyrimidine photo-lyase [Amycolatopsis sp. ATCC 39116]
Length = 433
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 7/183 (3%)
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFD 187
+ T LSP+LR+GC+ R DL+ + + + SL +L WREF+ P
Sbjct: 207 ATTRLSPYLRWGCIHPRTLLADLDTRHGKDVE-----SLRSELAWREFYADVLHHRPETA 261
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
R + ++ +D + E+ +W + +TG+P +DA M QL EGW+H+ R VA FL +
Sbjct: 262 RENYDKRFDKLAYDTDQESFDRWRDGRTGYPIVDAGMRQLLAEGWMHNRVRMIVASFLVK 321
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFF-QQFFHCYCPVKFGRKADPNG 306
DL W G + F L+D D + N W W++ + FF + P G K DP+G
Sbjct: 322 -DLHQPWWLGARHFMNHLVDGDLASNQLNWQWVAGTGTDPAPFFRVFNPTTQGEKFDPDG 380
Query: 307 DFI 309
++
Sbjct: 381 AYV 383
>gi|146306105|ref|YP_001186570.1| deoxyribodipyrimidine photo-lyase type I [Pseudomonas mendocina
ymp]
gi|145574306|gb|ABP83838.1| deoxyribodipyrimidine photo-lyase type I [Pseudomonas mendocina
ymp]
Length = 477
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 131/299 (43%), Gaps = 25/299 (8%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAK---MDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPT 75
I+ ++GG + Y QF+ + + M P PV QA TPL D +P
Sbjct: 139 ILTRSGGYFQV-YSQFRKVCYEHLHMALPGLVARPVA-----QAPTPLASD-----AIPH 187
Query: 76 LEELGFDIEG-LLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+ GF + L W GE A +RLER + + + + + P L + LSP
Sbjct: 188 AVD-GFAMPSEQLRSLWPAGEEAARQRLERFADEQ--IGYYKDERDFPA--LPGTSQLSP 242
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKKAPPP--LSLHGQLLWREFFYCAATRNPNFDRMLG- 191
+L G LS R H + + ++ +LLWREF+ P R
Sbjct: 243 YLAAGVLSPRQCLHAALAANRGEFDSGNAGVVTWVNELLWREFYKHILVGYPRVSRHRAF 302
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
P + W E LA W +TG P IDA M QL E GW+H+ R VA FLT+ +L
Sbjct: 303 RPETEAVAWRRAPEELAAWQQGRTGLPIIDAAMRQLLETGWMHNRLRMIVAMFLTK-NLL 361
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ W EG + F L+D D + N G W W S + +F + P+ +K D G FI
Sbjct: 362 IDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDAAPYFRIFNPISQSQKFDSEGRFI 420
>gi|24374895|ref|NP_718938.1| deoxyribodipyrimidine photolyase PhrB [Shewanella oneidensis MR-1]
gi|24349596|gb|AAN56382.1| deoxyribodipyrimidine photolyase PhrB [Shewanella oneidensis MR-1]
Length = 512
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 13/225 (5%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GE +A R L + +++K V + + + P + + +SP+L G LS R L
Sbjct: 233 WAAGEGQAKRLLNQFIQQK--VQDYKQDRDFPA--IDGTSVISPYLAIGVLSPRQCVAAL 288
Query: 151 NKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
+ + + P + +L+WREF+ P+ + GN Q + W N
Sbjct: 289 LQRFPEVIVDDTSPGRTWLNELIWREFYRHLLVAFPDLSK--GNNFNRQADHVLWRNNQS 346
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W +TG+P +DA M QL + GW+H+ R VA FLT+ L + W G + F + L
Sbjct: 347 EFLAWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERYFRQHL 405
Query: 266 LDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W + C Q +F + P+ K DP+G FI
Sbjct: 406 IDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFDPDGRFI 450
>gi|433427372|ref|ZP_20407032.1| deoxyribodipyrimidine photolyase, partial [Haloferax sp. BAB2207]
gi|432196390|gb|ELK52848.1| deoxyribodipyrimidine photolyase, partial [Haloferax sp. BAB2207]
Length = 400
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
G+PT+ +LGF E G A RL + + R T + +
Sbjct: 109 GLPTISDLGF--EEPSASVQSAGTEAARERLSAFCADAIYRYADDRDYPTRDAT----SR 162
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
LS L+FG + R Y + + ++ QL WREF+ +PN
Sbjct: 163 LSTDLKFGTIGIREVYAATAAAREGVGGERDESVEEFQSQLAWREFYAHVLREHPNVVTE 222
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
I W + E LA W +TG+P +DA M QLREE ++H+ R VA FLT+ D
Sbjct: 223 NYKEYEEDIAWRDDDEELAAWKAGETGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK-D 281
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
L W G F E L D D + + G W W S + Q +F + P+ G + DP+G++
Sbjct: 282 LLCDWRHGYAHFREHLADHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDGEY 341
Query: 309 I 309
I
Sbjct: 342 I 342
>gi|134291309|ref|YP_001115078.1| deoxyribodipyrimidine photo-lyase type I [Burkholderia
vietnamiensis G4]
gi|134134498|gb|ABO58823.1| deoxyribodipyrimidine photo-lyase type I [Burkholderia
vietnamiensis G4]
Length = 505
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 127/257 (49%), Gaps = 31/257 (12%)
Query: 73 VPTLEELGF-----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
V TL EL D G L TW+ GE A +LE LE ++ + + P +
Sbjct: 194 VCTLRELELQPSAPDWAGGLRETWQCGEQAASDQLEAFLENS--LSDYPTLRDFPAARAT 251
Query: 128 SQTGLSPFLRFGCLSTR-LFYHDLN--------KLYKRIKKAPPPLS-LHGQLLWREF-- 175
S+ LSP+LRFG +S R ++Y L+ ++ + + PLS ++ WREF
Sbjct: 252 SR--LSPYLRFGNISVRQVWYATLSAADAMRSARIVRGVDSKDGPLSKFLSEIGWREFSY 309
Query: 176 ---FYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGW 232
++ A NF R + +PW + ++L KW +TG+P +DA M +L GW
Sbjct: 310 HLLYHFAPLHQVNFRRQFDS-----MPWRDDAKSLRKWQTGRTGYPLVDAGMRELWHTGW 364
Query: 233 IHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFH 291
+H+ R A FL++ L + W +G F + L+DAD + N W W+S S + +F
Sbjct: 365 MHNRVRMVAASFLSK-HLLIDWRQGEAWFWDTLVDADEASNPASWQWVSGSGADAAPYFR 423
Query: 292 CYCPVKFGRKADPNGDF 308
+ PV +K DP+GD+
Sbjct: 424 IFNPVLQAQKFDPHGDY 440
>gi|448568084|ref|ZP_21637692.1| deoxyribodipyrimidine photolyase [Haloferax lucentense DSM 14919]
gi|445727546|gb|ELZ79157.1| deoxyribodipyrimidine photolyase [Haloferax lucentense DSM 14919]
Length = 484
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
G+PT+ +LGF E G A RL + + R T + +
Sbjct: 193 GLPTISDLGF--EEPSASVQSAGTEAARERLSAFCADAIYRYADDRDYPTRDAT----SR 246
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
LS L+FG + R Y + + ++ QL WREF+ +PN
Sbjct: 247 LSTDLKFGTIGIREVYAATAAAREGVGGERDESVEEFQSQLAWREFYAHVLREHPNVVTE 306
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
I W + E LA W +TG+P +DA M QLREE ++H+ R VA FLT+ D
Sbjct: 307 NYKEYEEDIAWRDDDEELAAWKAGETGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK-D 365
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
L W G F E L D D + + G W W S + Q +F + P+ G + DP+G++
Sbjct: 366 LLCDWRHGYAHFREHLADHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDGEY 425
Query: 309 I 309
I
Sbjct: 426 I 426
>gi|113969509|ref|YP_733302.1| deoxyribodipyrimidine photo-lyase type I [Shewanella sp. MR-4]
gi|113884193|gb|ABI38245.1| Deoxyribodipyrimidine photo-lyase type I [Shewanella sp. MR-4]
Length = 493
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 19/228 (8%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GE +A R L +++KA + + + P L + +SP+L G LS R L
Sbjct: 214 WAAGEGQAKRILTAFIQQKA--QDYKQDRDFPA--LEGTSVISPYLALGVLSPRQCIAAL 269
Query: 151 NKLYKRI--KKAPPPLSLHGQLLWREFF------YCAATRNPNFDRMLGNPICVQIPWDV 202
+ + P + +L+WREF+ + ++ NF+R + + W
Sbjct: 270 LGRFPEVIVDDTSPGRTWLNELIWREFYRHLLVAFPDLSKGHNFNRQADH-----VQWRN 324
Query: 203 NMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFD 262
N W +TG+P +DA M QL + GW+H+ R VA FLT+ L + W G + F
Sbjct: 325 NQAEFLAWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERYFR 383
Query: 263 ELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ L+D D + N G W W + C Q +F + P+ K DP+G FI
Sbjct: 384 QHLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPISQSEKFDPDGSFI 431
>gi|238028072|ref|YP_002912303.1| deoxyribodipyrimidine photolyase [Burkholderia glumae BGR1]
gi|237877266|gb|ACR29599.1| Deoxyribodipyrimidine photolyase [Burkholderia glumae BGR1]
Length = 489
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 110/242 (45%), Gaps = 18/242 (7%)
Query: 81 FDIEGLLP--PTWKGGETEA--------MRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
D GLLP P W GG EA + RLE L+++ + +G + P S+
Sbjct: 193 IDALGLLPVRPDWAGGLREAWEPSEEGGLARLEAFLDKQ--IRGYGDARDRPDRPATSR- 249
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPP--LSLHGQLLWREFFYCAATRNPNFDR 188
LSP+LRFG LS R +H + A +L WREF P
Sbjct: 250 -LSPYLRFGQLSARQVWHAAQAAGREGGAAVAADIEKFLSELGWREFNTSLLYHFPELPM 308
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+PW + A A W +TG+P +DA M +L GW+H+ R A FL +
Sbjct: 309 RNYRDRFDAMPWRSDEAAFAAWCRGRTGYPLVDAGMRELWATGWMHNRVRMVTASFLIK- 367
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGD 307
L + W G + F + L+DAD + N+ W W++ S +F + PV GRK DP+G
Sbjct: 368 HLLIDWRAGERWFWDTLVDADIANNSANWQWVAGSGADAAPYFRIFNPVMQGRKFDPDGA 427
Query: 308 FI 309
++
Sbjct: 428 YV 429
>gi|395650278|ref|ZP_10438128.1| deoxyribodipyrimidine photolyase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 481
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 109/237 (45%), Gaps = 15/237 (6%)
Query: 83 IEGLLPPT------WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
+EG PP+ W GE EA RRL+ E++ ++ + + P SQ LS +L
Sbjct: 188 VEGFEPPSDTLRALWPAGEDEARRRLDAFAEQR--ISDYKDQRDFPAKPGTSQ--LSAYL 243
Query: 137 RFGCLSTRLFYHD-LNKLYKRIKKAP-PPLSLHGQLLWREFFYCAATRNPNFDRMLG-NP 193
G +S R H L + ++ +LLWREF+ P R P
Sbjct: 244 AAGVVSPRQCLHAALQSNGGEFESGDVGTITWISELLWREFYKHILVGYPRVSRHRAFRP 303
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+ W + LA W A+TG P IDA M QL E GW+H+ R VA FLT+ +L +
Sbjct: 304 ETEAVAWRDAPQDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTK-NLLID 362
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
W EG + F L+D D + N G W W S + +F + P+ K D +G FI
Sbjct: 363 WREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDGDGVFI 419
>gi|83858274|ref|ZP_00951796.1| Deoxyribodipyrimidine photolyase [Oceanicaulis sp. HTCC2633]
gi|83853097|gb|EAP90949.1| Deoxyribodipyrimidine photolyase [Oceanicaulis sp. HTCC2633]
Length = 480
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 107/230 (46%), Gaps = 10/230 (4%)
Query: 82 DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCL 141
D G L W GE A RL + L KA V+ + + P S+ LSP L FG +
Sbjct: 197 DWSGGLQENWTPGEAAAHGRLGQFL--KAAVSDYSDRRDLPGQSGTSR--LSPHLHFGEI 252
Query: 142 STRLFYHDLNKL-YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW 200
S R +H + + + R A LS ++ WREF Y P+ W
Sbjct: 253 SPRQVWHAVKQSDHARTGGADTYLS---EIAWREFSYNLLYHFPDLPEANFQSKFDAFEW 309
Query: 201 DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKI 260
D + L W QTG+P +DA M +L GW+H+ R VA FL + DL++ W G
Sbjct: 310 DECEDKLKAWQKGQTGYPIVDAGMRELWATGWMHNRVRMIVASFLIK-DLFIHWRRGEDW 368
Query: 261 FDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + L+DAD + NA W W + S + +F + PV K DP GD++
Sbjct: 369 FWDTLVDADLASNAASWQWTAGSGADAAPYFRVFNPVGQSEKFDPKGDYL 418
>gi|16802631|ref|NP_464116.1| hypothetical protein lmo0588 [Listeria monocytogenes EGD-e]
gi|386049515|ref|YP_005967506.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes FSL
R2-561]
gi|404283027|ref|YP_006683924.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC2372]
gi|405757582|ref|YP_006686858.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC2479]
gi|16409964|emb|CAC98667.1| lmo0588 [Listeria monocytogenes EGD-e]
gi|346423361|gb|AEO24886.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes FSL
R2-561]
gi|404232529|emb|CBY53932.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC2372]
gi|404235464|emb|CBY56866.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC2479]
Length = 467
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 103/225 (45%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL ++ VA + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDSGEKTANTRLANFIKHD--VADYDKARDFPE--LDKTSHLSRYLRTGEISVRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A +L WR+F+ PN PI I W+ N E
Sbjct: 245 ALQENEATEGRA----IFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMVTASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K DP G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTGKFI 401
>gi|116871975|ref|YP_848756.1| deoxyribodipyrimidine photolyase [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116740853|emb|CAK19973.1| deoxyribodipyrimidine photolyase [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 470
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE A RL+ ++R +A + + + P S S LS +LR G +S R + L
Sbjct: 197 GEEAANTRLKNFIKRD--LAEYAKARDIPDSDQTSH--LSRYLRTGEISIRTVWQAL--- 249
Query: 154 YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNMEALAKW 210
++ K +L WR+F+ PN PI I W+ N E +W
Sbjct: 250 -QQTKPTEGRAIFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNREFFKQW 305
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
+TG+P +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L+D D
Sbjct: 306 QEGKTGYPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRYGEKYFQQMLIDYDP 364
Query: 271 SVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N W W S + +F + P K DP+G FI
Sbjct: 365 ASNISGWQWAASTGTDAVPYFRIFNPTTQSEKFDPSGKFI 404
>gi|124383478|ref|YP_001028857.1| deoxyribodipyrimidine photolyase [Burkholderia mallei NCTC 10229]
gi|254357787|ref|ZP_04974060.1| deoxyribodipyrimidine photolyase [Burkholderia mallei 2002721280]
gi|124291498|gb|ABN00767.1| deoxyribodipyrimidine photolyase [Burkholderia mallei NCTC 10229]
gi|148026914|gb|EDK84935.1| deoxyribodipyrimidine photolyase [Burkholderia mallei 2002721280]
Length = 534
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 245 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 298
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 299 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLR 358
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 359 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 417
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 418 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 475
>gi|443324015|ref|ZP_21052973.1| cryptochrome, DASH family [Xenococcus sp. PCC 7305]
gi|442796190|gb|ELS05502.1| cryptochrome, DASH family [Xenococcus sp. PCC 7305]
Length = 491
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 21/291 (7%)
Query: 26 KTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELG----- 80
+ P + F+ V K S + + A V Q PL D + + +P L +LG
Sbjct: 150 QIPELFTNFRKSVEKKSSVASSFA------VPQELPPLPDINLGE--LPQLSDLGLEAPK 201
Query: 81 FDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRF 138
FD +L +KGGET A+ RL+ ++ ++ + K T +L + + SP+L
Sbjct: 202 FDSRAVL--DFKGGETAALARLDSYIWSGDYLKDY---KKTRNGMLGADYSSKFSPWLAL 256
Query: 139 GCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQI 198
GCLS RL Y + + + K L +LLWR+FFY T++ + + I
Sbjct: 257 GCLSPRLIYEQVQEYEAQRVKNDSTYWLIFELLWRDFFYFIGTKHGDRIFRQSGLQGITI 316
Query: 199 PWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGM 258
W + W +TGFP +DA M +L G++ + R VA FLT+ +L ++W+ G
Sbjct: 317 SWKEDWTRFKLWQEGKTGFPLVDANMRELATTGFMSNRGRQNVASFLTK-NLGINWQMGA 375
Query: 259 KIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ F+ L+D D N G W + + + F + K + DP G+++
Sbjct: 376 EWFESCLIDYDVCSNWGNWNYTAGVGNDARGFRYFNIPKQSKNYDPQGEYL 426
>gi|114046742|ref|YP_737292.1| deoxyribodipyrimidine photo-lyase type I [Shewanella sp. MR-7]
gi|113888184|gb|ABI42235.1| Deoxyribodipyrimidine photo-lyase type I [Shewanella sp. MR-7]
Length = 493
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 19/228 (8%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GE +A R L +++KA + + + P L + +SP+L G LS R L
Sbjct: 214 WAAGEGQAKRILTAFIQQKA--QDYKQDRDFPA--LEGTSVISPYLALGVLSPRQCIAAL 269
Query: 151 NKLYKRI--KKAPPPLSLHGQLLWREFF------YCAATRNPNFDRMLGNPICVQIPWDV 202
+ + P + +L+WREF+ + ++ NF+R + + W
Sbjct: 270 LGRFPEVIVDDTSPGRTWLNELIWREFYRHLLVAFPDLSKGHNFNRQADH-----VQWRN 324
Query: 203 NMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFD 262
N W +TG+P +DA M QL + GW+H+ R VA FLT+ L + W G + F
Sbjct: 325 NQAEFLAWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERYFR 383
Query: 263 ELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ L+D D + N G W W + C Q +F + P+ K DP+G FI
Sbjct: 384 QHLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPISQSEKFDPDGSFI 431
>gi|78778672|ref|YP_396784.1| deoxyribodipyrimidine photo-lyase type I [Prochlorococcus marinus
str. MIT 9312]
gi|78712171|gb|ABB49348.1| deoxyribodipyrimidine photo-lyase type I [Prochlorococcus marinus
str. MIT 9312]
Length = 478
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 103/219 (47%), Gaps = 7/219 (3%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH---DL 150
GE A LE+ + K + S+ + P + LS LRFG +S R ++ DL
Sbjct: 215 GENGAEILLEKFINEKN-IYSYNSARDLPSH--NGTSFLSASLRFGTISIRKVWNATLDL 271
Query: 151 NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
N ++ + + + +L+WREF+ P ++ Q PW N E W
Sbjct: 272 NSDFESHENSLSIETWQKELVWREFYQHCLFHFPELEKGPYRKKWGQFPWQNNNEWFQHW 331
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
+N +TG P +DA M QL GW+H+ R VA FL + DL SW+ G K F E L+D D
Sbjct: 332 SNGETGVPIVDAAMRQLNSTGWMHNRCRMIVASFLVK-DLICSWQMGEKKFMETLVDGDL 390
Query: 271 SVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G W W + S + + P +K DP ++I
Sbjct: 391 AANNGGWQWSASSGMDPKPLRIFNPYTQAKKFDPICEYI 429
>gi|349701797|ref|ZP_08903426.1| deoxyribodipyrimidine photo-lyase [Gluconacetobacter europaeus LMG
18494]
Length = 466
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 9/220 (4%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W+ GE A RL+ + + V + + P + +GLSP+LRFG +S R +H +
Sbjct: 205 WQPGEAAAHARLDAFVAER--VHGYATQRELPAQ--PATSGLSPYLRFGHVSPRQVWHAV 260
Query: 151 NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
L + + LS ++ WR+F + P P +PW + AL W
Sbjct: 261 ETLGPGDQDSACFLS---EVGWRDFAHATLFDFPGMGTGNLRPEYDNMPWRHDPVALRAW 317
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
+TG+P IDA M +L GW+H+ R VA FLT+ L + W G F + L+DAD
Sbjct: 318 QKGKTGYPIIDAGMRELWHTGWMHNRVRMVVASFLTK-HLLLDWRVGEAWFADTLVDADA 376
Query: 271 SVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N W W++ C +F + PV G K DP GD++
Sbjct: 377 ASNPFNWQWVAGCGLDAAPYFRVFNPVAQGEKFDPAGDYV 416
>gi|104780105|ref|YP_606603.1| deoxyribodipyrimidine photolyase [Pseudomonas entomophila L48]
gi|95109092|emb|CAK13789.1| deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding
[Pseudomonas entomophila L48]
Length = 484
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 103/223 (46%), Gaps = 9/223 (4%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHD- 149
W GE EA RRL R ++ V + + + P SQ LSP+L G +S R H
Sbjct: 202 WPAGEEEAQRRLSRFIDET--VEDYPQLRDLPAKAGTSQ--LSPYLAAGVISPRQCLHAA 257
Query: 150 LNKLYKRIKKAPPPLSL-HGQLLWREFFYCAATRNPNFDRMLGNPICVQ-IPWDVNMEAL 207
L + + +LLWREF+ P R + + +PW + L
Sbjct: 258 LASNHGEFDSGNAGVQTWVNELLWREFYKHILVGYPQVSRHRAFRVHTEALPWRNAPDDL 317
Query: 208 AKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLD 267
W +TGFP IDA M QL E GW+H+ R VA FL++ +L + W EG + F L+D
Sbjct: 318 EAWKQGRTGFPIIDAAMRQLLETGWMHNRLRMIVAMFLSK-NLLIDWREGERHFMRHLID 376
Query: 268 ADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
D + N G W W S + +F + P ++ DP G FI
Sbjct: 377 GDLAANNGGWQWSASTGTDAVPYFRIFNPTTQSQRFDPKGTFI 419
>gi|290892787|ref|ZP_06555778.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes FSL
J2-071]
gi|404407050|ref|YP_006689765.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC2376]
gi|290557599|gb|EFD91122.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes FSL
J2-071]
gi|404241199|emb|CBY62599.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC2376]
Length = 467
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 104/225 (46%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL ++ +A + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDSGERAANTRLANFIKHD--IADYDKARDFPE--LDKTSHLSRYLRTGEISIRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
+L + +A + +L WR+F+ PN PI I W+ N E
Sbjct: 245 ELQETEATEGRA----TFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K DP FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTAKFI 401
>gi|427722807|ref|YP_007070084.1| deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific)
[Leptolyngbya sp. PCC 7376]
gi|427354527|gb|AFY37250.1| deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific)
[Leptolyngbya sp. PCC 7376]
Length = 518
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 133/296 (44%), Gaps = 28/296 (9%)
Query: 26 KTPLTYHQFQSIVAKMDS-----PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELG 80
+ P + QF+ V K + P+P E P P + A L PTL++LG
Sbjct: 150 QVPEVFTQFRKTVEKYANIVQALPTPQELPPLPSELAMALGEL----------PTLKQLG 199
Query: 81 F-----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLS 133
D G+L ++GGET A+ RL+ + R + S+ K T LL + S
Sbjct: 200 LSTPESDRRGVL--AFQGGETAALERLQDYFWRGNHLKSY---KQTRNGLLGGDYSSKFS 254
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
P+L GCLS R +++ L +LLWR++F + ++
Sbjct: 255 PWLALGCLSARQIAAQVSRYETERVANDSTYWLIFELLWRDYFRWISAKHGIKIFQPKGL 314
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
V+IPW + EA W QTG P++DA M +L + G++ + R V FLT+ +L +
Sbjct: 315 QGVKIPWKQDREAFELWRTGQTGIPFVDANMRELLQTGFMSNRGRQNVGSFLTK-NLGLD 373
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G + F+ L+D D N G W + + + F + K + DP G+++
Sbjct: 374 WRMGAEWFESQLIDYDVCSNWGNWNYTAGVGNDARGFRYFNIPKQAKDYDPQGEYV 429
>gi|426411468|ref|YP_007031567.1| deoxyribodipyrimidine photolyase [Pseudomonas sp. UW4]
gi|426269685|gb|AFY21762.1| deoxyribodipyrimidine photolyase [Pseudomonas sp. UW4]
Length = 480
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 108/243 (44%), Gaps = 15/243 (6%)
Query: 77 EELGFDIEGLLPP------TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+ + +EG P W GETEA RRL+ E A + + + P SQ
Sbjct: 182 DAIPLSVEGFATPGDHLRSLWPAGETEARRRLDNFSE--AQIEHYQNERDFPAKPGTSQ- 238
Query: 131 GLSPFLRFGCLSTRLFYHD-LNKLYKRIKKAPP-PLSLHGQLLWREFFYCAATRNPNFDR 188
LS +L G +S R H LN + ++ +LLWREF+ P R
Sbjct: 239 -LSAYLAAGVISPRQCLHAALNSNQGEFESGNTGAVTWINELLWREFYKHILVGYPRVSR 297
Query: 189 MLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
P + W + LA W A+TG P IDA M QL GW+H+ R VA FLT+
Sbjct: 298 HRAFRPETEALAWRDAPDELAAWQQARTGLPIIDAAMRQLLATGWMHNRLRMVVAMFLTK 357
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNG 306
+L + W EG + F L+D D + N G W W S + +F + P+ K DP G
Sbjct: 358 -NLLIDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSEKFDPEG 416
Query: 307 DFI 309
FI
Sbjct: 417 VFI 419
>gi|53719958|ref|YP_108944.1| DNA photolyase [Burkholderia pseudomallei K96243]
gi|126453768|ref|YP_001066985.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1106a]
gi|134277838|ref|ZP_01764553.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 305]
gi|226200012|ref|ZP_03795562.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei
Pakistan 9]
gi|242315962|ref|ZP_04814978.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1106b]
gi|254195952|ref|ZP_04902378.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei S13]
gi|254296960|ref|ZP_04964413.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 406e]
gi|386861077|ref|YP_006274026.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1026b]
gi|418380478|ref|ZP_12966443.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 354a]
gi|418537248|ref|ZP_13102889.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1026a]
gi|418540357|ref|ZP_13105904.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1258a]
gi|418546604|ref|ZP_13111810.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1258b]
gi|418552828|ref|ZP_13117676.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 354e]
gi|52210372|emb|CAH36352.1| putative DNA photolyase [Burkholderia pseudomallei K96243]
gi|126227410|gb|ABN90950.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1106a]
gi|134251488|gb|EBA51567.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 305]
gi|157807746|gb|EDO84916.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 406e]
gi|169652697|gb|EDS85390.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei S13]
gi|225928068|gb|EEH24105.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei
Pakistan 9]
gi|242139201|gb|EES25603.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1106b]
gi|385350248|gb|EIF56796.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1026a]
gi|385362092|gb|EIF67936.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1258a]
gi|385364061|gb|EIF69807.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1258b]
gi|385372519|gb|EIF77626.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 354e]
gi|385377308|gb|EIF81897.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 354a]
gi|385658205|gb|AFI65628.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1026b]
Length = 486
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 197 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 250
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 251 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLR 310
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 311 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 369
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 370 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 427
>gi|423551107|ref|ZP_17527434.1| hypothetical protein IGW_01738 [Bacillus cereus ISP3191]
gi|401188440|gb|EJQ95508.1| hypothetical protein IGW_01738 [Bacillus cereus ISP3191]
Length = 476
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTFKKFFSSKLVSYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDLNKLYKRIKKAPPPL-----SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L YH L + K +K S Q +WREF Y P N P
Sbjct: 247 LIYHYL--INKSNEKQCSLFEQQVNSFIRQFIWREFSYYLLYHYPFTVYKPLNKNFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNNEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 414
>gi|443288138|ref|ZP_21027232.1| Deoxyribodipyrimidine photo-lyase [Micromonospora lupini str. Lupac
08]
gi|385881715|emb|CCH22325.1| Deoxyribodipyrimidine photo-lyase [Micromonospora lupini str. Lupac
08]
Length = 441
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 18/226 (7%)
Query: 85 GLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG-LSPFLRFGCLST 143
G P GGE A +RL W+ GR + T LSP+LRFGC+S
Sbjct: 187 GESPDAATGGERIARQRL------TDWLPELGRYDDQHDDMAGDDTSRLSPYLRFGCVSP 240
Query: 144 RLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L+ + ++ P + Q+ WR+F+Y P + W +
Sbjct: 241 ------LSVANRAGDRSGPFVR---QVCWRDFYYQVTAAFPEISTAAYRRGATE-QWRYD 290
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
+AL WA +TG P +DA M Q+R +GW H+ AR A +LT+ L W G+ +F
Sbjct: 291 DDALTAWAEGRTGMPIVDAGMRQMRAQGWQHNRARLITAGYLTK-HLGQDWRAGVAVFFR 349
Query: 264 LLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LLD D + N+G W W++ + + + + PV+ + DP GD++
Sbjct: 350 WLLDGDVANNSGNWQWVAGTGNDTKPYRGFNPVRQAERYDPAGDYV 395
>gi|15790367|ref|NP_280191.1| photolyase/cryptochrome [Halobacterium sp. NRC-1]
gi|10580849|gb|AAG19671.1| photolyase/cryptochrome [Halobacterium sp. NRC-1]
Length = 489
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 111/246 (45%), Gaps = 20/246 (8%)
Query: 73 VPTLEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
+P+++ELGF + E +P T A R L + + + P S+
Sbjct: 197 LPSVQELGFAEPEAAVP----DAGTAAARSLLDAFRESGDIYRYEDRRDYPHEEPTSR-- 250
Query: 132 LSPFLRFGCLSTRLFYH-------DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNP 184
LSP L+FG + R Y D + +R A + GQL WREF+ N
Sbjct: 251 LSPHLKFGTIGIRTVYEAARAAKSDADTDDERENVA----AFIGQLAWREFYAQVLYFNQ 306
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
N I W + AL W + +TG+P +DA M QLR E ++H+ R VA F
Sbjct: 307 NVVSENFKAYEHPIEWRDDPAALQAWKDGETGYPIVDAGMRQLRAEAYMHNRVRMIVAAF 366
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKAD 303
LT+ DL V W G F E L D D + + G W W S + Q +F + P+ G + D
Sbjct: 367 LTK-DLLVDWRAGYDWFREKLADHDTANDNGGWQWAASTGTDAQPYFRVFNPMTQGERYD 425
Query: 304 PNGDFI 309
P+ D+I
Sbjct: 426 PDADYI 431
>gi|217421243|ref|ZP_03452748.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 576]
gi|217396655|gb|EEC36672.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 576]
Length = 486
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 197 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 250
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 251 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLR 310
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 311 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 369
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 370 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 427
>gi|255950764|ref|XP_002566149.1| Pc22g22550 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593166|emb|CAP99543.1| Pc22g22550 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 581
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 117/245 (47%), Gaps = 27/245 (11%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG--LS 133
L+E EGL P GE EA++RL+ LE K G+ +S+L+ ++ LS
Sbjct: 298 LDEEQKRFEGLYP----AGEHEALQRLDNFLEEK------GKEYEETRSMLSGESTSVLS 347
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKA------PPPLSLHGQLLWREFFYCAATRNPNFD 187
P+ G LS R KRI K P ++ +L WR+F+ P F
Sbjct: 348 PYFACGALSARTAV----ATAKRINKGHIDRYNPGYMTWISELAWRDFYKHVLVNWP-FI 402
Query: 188 RMLG--NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
M P I W+ + + W + +TGFP +DA M QLR W+H+ R V+ F
Sbjct: 403 CMNKCFKPEHTNIEWEYDKDQFQAWCDGKTGFPIVDAAMRQLRHCAWMHNRTRMVVSSFF 462
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFF-QQFFHCYCPVKFGRKADP 304
T+ DL + W G + F E L+D D++ N G W + S + Q +F + P++ + DP
Sbjct: 463 TK-DLMLDWRRGERYFMENLIDGDFASNHGGWGFGSSTGVDPQPYFRIFNPLRQSERFDP 521
Query: 305 NGDFI 309
G++I
Sbjct: 522 EGEYI 526
>gi|448612276|ref|ZP_21662501.1| deoxyribodipyrimidine photolyase [Haloferax mucosum ATCC BAA-1512]
gi|445741508|gb|ELZ93008.1| deoxyribodipyrimidine photolyase [Haloferax mucosum ATCC BAA-1512]
Length = 482
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 122/300 (40%), Gaps = 17/300 (5%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPL------RDDHDEKYG- 72
I N G Y F D P P P LV T D D G
Sbjct: 132 ITTNAGDIYSVYTYFWKKWRDRDKPDPYPEPEAGDLVDAETLETVAERCADDAFDVAVGD 191
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
VPT+ LGF E G A RL E + +G + P S+ L
Sbjct: 192 VPTISSLGF--EAPAADVVSAGTEVARDRLSAFCEDA--IFRYGDDRDYPARDATSR--L 245
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRML 190
S L+FG + R Y + + +K QL WREF+ NP+
Sbjct: 246 STDLKFGTIGIREVYAATVDAREGVGGEKDESVEEFQSQLAWREFYTHVLWDNPSVVTEN 305
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
I W + + LA W + +TG+P +DA M QL++E ++H+ R VA FLT+ DL
Sbjct: 306 YKQYENDIQWRDDPDELAAWKDGRTGYPIVDAGMRQLKQEAYMHNRVRMIVASFLTK-DL 364
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F E L D D + + G W W S + Q +F + P+ G + DP+G++I
Sbjct: 365 LCDWRHGYDHFREYLSDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDGEYI 424
>gi|448601043|ref|ZP_21656326.1| deoxyribodipyrimidine photolyase [Haloferax alexandrinus JCM 10717]
gi|445734646|gb|ELZ86204.1| deoxyribodipyrimidine photolyase [Haloferax alexandrinus JCM 10717]
Length = 484
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
G+PT+ +LGF E G A RL + + R T + +
Sbjct: 193 GLPTISDLGF--EEPSASVQSAGTEAARERLSAFCADAIYRYADDRDYPTRDAT----SR 246
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
LS L+FG + R Y + + ++ QL WREF+ +PN
Sbjct: 247 LSTDLKFGTIGIREVYAATAAAREGVGGERDESVEEFQSQLAWREFYAHVLREHPNVVTE 306
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
I W + E LA W +TG+P +DA M QLREE ++H+ R VA FLT+ D
Sbjct: 307 NYKEYEEDIAWRDDDEELAAWKAGETGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK-D 365
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
L W G F E L D D + + G W W S + Q +F + P+ G + DP+G++
Sbjct: 366 LLCDWRHGYAHFREHLADHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDGEY 425
Query: 309 I 309
I
Sbjct: 426 I 426
>gi|254184299|ref|ZP_04890889.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1655]
gi|184214830|gb|EDU11873.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1655]
Length = 534
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 245 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 298
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 299 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLR 358
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 359 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 417
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 418 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 475
>gi|254191331|ref|ZP_04897835.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei Pasteur
52237]
gi|157939003|gb|EDO94673.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei Pasteur
52237]
Length = 534
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 245 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 298
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 299 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLR 358
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 359 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 417
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 418 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 475
>gi|448565094|ref|ZP_21636065.1| deoxyribodipyrimidine photolyase [Haloferax prahovense DSM 18310]
gi|445715753|gb|ELZ67506.1| deoxyribodipyrimidine photolyase [Haloferax prahovense DSM 18310]
Length = 482
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 122/300 (40%), Gaps = 17/300 (5%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT--TPLRDDHDEKYGV---- 73
I N G T Y F D P P P L T T D ++ V
Sbjct: 132 ITTNAGDTYSVYTYFWKKWRDRDKPDPYPEPDADDLADANTLETAAEALADAEFDVAAGD 191
Query: 74 -PTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
PT+ +LGF E G A RL + + R T + + L
Sbjct: 192 LPTISDLGF--EEPSASVQPAGTEAARERLSAFCSDAIYRYADDRDYPTRDAT----SRL 245
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRML 190
S L+FG + R Y + + ++ QL WREF+ +PN
Sbjct: 246 STDLKFGTIGIREVYAATAAAREGVGGERDESVEEFQSQLAWREFYAHVLREHPNVVTEN 305
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
I W + + LA W +TG+P +DA M QLREE ++H+ R VA FLT+ DL
Sbjct: 306 YKEYENDIAWRDDADELAAWKEGKTGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK-DL 364
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F E L D D + + G W W S + + Q +F + P+ G + DP+G++I
Sbjct: 365 LCDWRHGYAHFREHLADHDTANDNGGWQWASSTGTDAQPYFRIFNPMTQGERYDPDGEYI 424
>gi|301054669|ref|YP_003792880.1| deoxyribodipyrimidine photolyase [Bacillus cereus biovar anthracis
str. CI]
gi|300376838|gb|ADK05742.1| deoxyribodipyrimidine photolyase [Bacillus cereus biovar anthracis
str. CI]
Length = 476
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTFKKFFSSKLVSYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDLNKLYKRIKKAPPPL-----SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L YH L + K +K S Q +WREF Y P N P
Sbjct: 247 LIYHYL--INKSNEKQCSLFEQQVNSFIRQFIWREFSYYLLYHYPFTVYKPLNKNFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNNEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 414
>gi|150261312|pdb|2J4D|A Chain A, Cryptochrome 3 From Arabidopsis Thaliana
gi|150261313|pdb|2J4D|B Chain B, Cryptochrome 3 From Arabidopsis Thaliana
gi|28971609|dbj|BAC65244.1| cryptochrome dash [Arabidopsis thaliana]
Length = 525
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 132/286 (46%), Gaps = 16/286 (5%)
Query: 28 PLTYHQF-QSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGL 86
P Y QF +S+ AK S P++ TP DD + VPTLE+LG + + +
Sbjct: 191 PDVYTQFRKSVEAKCSIRSSTRIPLS-----LGPTPSVDDWGD---VPTLEKLGVEPQEV 242
Query: 87 LPPT-WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFGCLST 143
+ GGE+ + R+ + +K + + K T +L T SP+L FGC+S
Sbjct: 243 TRGMRFVGGESAGVGRVFEYFWKKDLLKVY---KETRNGMLGPDYSTKFSPWLAFGCISP 299
Query: 144 RLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
R Y ++ + K + +L+WR++F + + N LG P VQ W +
Sbjct: 300 RFIYEEVQRYEKERVANNSTYWVLFELIWRDYFRFLSIKCGNSLFHLGGPRNVQGKWSQD 359
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
+ W +A+TG+P IDA M +L G++ + R V FL R D+ + W G + F+
Sbjct: 360 QKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVR-DMGLDWRMGAEWFET 418
Query: 264 LLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LLD D N G W + + + + K + DP G+++
Sbjct: 419 CLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYV 464
>gi|146340206|ref|YP_001205254.1| deoxyribodipyrimidine photo-lyase [Bradyrhizobium sp. ORS 278]
gi|146193012|emb|CAL77021.1| Deoxyribodipyrimidine photo-lyase (DNA photolyase)
(Photoreactivating enzyme) [Bradyrhizobium sp. ORS 278]
Length = 415
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 124/290 (42%), Gaps = 19/290 (6%)
Query: 25 GKTPLTYHQF-QSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDI 83
G+ P + F + ++A D P P P +V T DD LE D
Sbjct: 78 GRGPRVFTPFWKRVLALGDPPKPLPTPARLPMVPDVTGLTVDDL-------RLEPTKPDW 130
Query: 84 EGLLPPTWKGGETEAMRRLERHLER--KAWVASFGRPKMTPQSLLASQTGLSPFLRFGCL 141
G L TW+ GE A +RL LE + A RP + S L SP LRFG +
Sbjct: 131 AGGLRATWQAGERAAQQRLRSFLESTVSGYAADRDRPDIDATSRL------SPHLRFGEI 184
Query: 142 STRLFYHDLN-KLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW 200
+ R +H +R +A ++ WREF NP+ P PW
Sbjct: 185 TPRQIWHAARFAAEERPAQAKGIDKFLSEIGWREFSRHLLYNNPDLASRNLQPSFDPFPW 244
Query: 201 DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKI 260
+ ALA W +TG+P +DA + +L G +H+ R A L + L + W +G +
Sbjct: 245 VQDDAALAAWQRGRTGYPIVDAGLRELWHTGSMHNRVRMVAASLLVK-HLLIDWRQGEQW 303
Query: 261 FDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + L+DAD N W W++ S + +F + PV G K D NG ++
Sbjct: 304 FWDTLVDADPGSNPASWQWVAGSGADAAPYFRVFNPVLQGEKFDANGSYV 353
>gi|228986230|ref|ZP_04146370.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228773492|gb|EEM21918.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 476
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTFKKFFSSKLVSYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDLNKLYKRIKKAPPPL-----SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L YH L + K +K S Q +WREF Y P N P
Sbjct: 247 LIYHYL--INKSNEKQCSLFEQQVNSFIRQFIWREFSYYLLYHYPFTVYKPLNKNFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNNEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 414
>gi|284800868|ref|YP_003412733.1| hypothetical protein LM5578_0616 [Listeria monocytogenes 08-5578]
gi|284994054|ref|YP_003415822.1| hypothetical protein LM5923_0615 [Listeria monocytogenes 08-5923]
gi|284056430|gb|ADB67371.1| hypothetical protein LM5578_0616 [Listeria monocytogenes 08-5578]
gi|284059521|gb|ADB70460.1| hypothetical protein LM5923_0615 [Listeria monocytogenes 08-5923]
Length = 467
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 104/225 (46%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL ++ +A + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDSGERAANTRLANFIKHD--IADYDKARDFPE--LDKTSHLSRYLRTGEISVRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A +L WR+F+ PN PI I W+ N E
Sbjct: 245 ALQENEATEGRA----IFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W + +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKAWQDGKTGFPLVDAAMRQLKETGWMHNRLRMVTASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K DP G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTGKFI 401
>gi|76808656|ref|YP_334184.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1710b]
gi|254258748|ref|ZP_04949802.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1710a]
gi|76578109|gb|ABA47584.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1710b]
gi|254217437|gb|EET06821.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 1710a]
Length = 486
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 197 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 250
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 251 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLR 310
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 311 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 369
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 370 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 427
>gi|237813094|ref|YP_002897545.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei
MSHR346]
gi|237504878|gb|ACQ97196.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei
MSHR346]
Length = 486
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 197 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 250
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 251 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLR 310
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 311 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 369
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 370 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 427
>gi|357032216|ref|ZP_09094156.1| deoxyribodipyrimidine photolyase [Gluconobacter morbifer G707]
gi|356414443|gb|EHH68090.1| deoxyribodipyrimidine photolyase [Gluconobacter morbifer G707]
Length = 481
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 131/301 (43%), Gaps = 29/301 (9%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH-DEKYGVPTL 76
RI K GG + Y F + P P + P R A + ++ D DE +P
Sbjct: 143 RIRTKEGGFYRV-YTSFWKALQGQAVPEPLDLPSDFPFFRVAPSLMKTDRLDEAALLPRH 201
Query: 77 EELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSP 134
D G L TW+ GE EA L L + V +GR + L+A + + LSP
Sbjct: 202 P----DWAGGLRSTWEPGEREAHEHLTDFLHHE--VDHYGRGR----DLMAEEGTSRLSP 251
Query: 135 FLRFGCLSTRLFY-----HDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
+L G +S R + H LN RI ++ ++ WREF P
Sbjct: 252 YLASGAISPRQVWATVGEHGLNGEDARIFRS--------EIGWREFARYTLYHFPQLCER 303
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
N + W E L W QTG P +DA M QL + GW+H+ AR V FLT+
Sbjct: 304 NLNRKFDALSWRRAPEDLRAWQKGQTGIPVVDAAMRQLWQTGWMHNRARMIVGSFLTK-H 362
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDF 308
L V W EG F + L+DAD + N W W++ + FF + P + K DP+GD+
Sbjct: 363 LLVDWREGEAWFWDTLVDADRANNTMNWQWVAGTGIDAAPFFRVFNPSRQAEKFDPDGDY 422
Query: 309 I 309
I
Sbjct: 423 I 423
>gi|307151428|ref|YP_003886812.1| deoxyribodipyrimidine photo-lyase [Cyanothece sp. PCC 7822]
gi|306981656|gb|ADN13537.1| Deoxyribodipyrimidine photo-lyase [Cyanothece sp. PCC 7822]
Length = 476
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 14/242 (5%)
Query: 73 VPTLEELGFDIEG--LLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+PT ++LG+ E LL P GET A +RLE + + + P + +
Sbjct: 190 LPTAKKLGYAWENPLLLDP----GETAAKKRLEEFCSSA--INEYQEQRNFPA--VDGTS 241
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFD 187
LS L+FG + R + ++Y+ + S+ +L WREF+ P
Sbjct: 242 RLSAALKFGAIGIRTVWKATLEVYENSRSDEARKSIETWQQELAWREFYQHCMYFFPELA 301
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
PW N + W +TG+P +DA M QL E W+H+ R VA FLT+
Sbjct: 302 EGSYRKDFRSFPWQNNEDYFQAWCEGKTGYPIVDAAMRQLNETAWMHNRCRMIVASFLTK 361
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL ++W+ G K F + L D D S N G W W + S + + P +K DP G+
Sbjct: 362 -DLIINWQWGEKYFMQKLYDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAQKFDPEGE 420
Query: 308 FI 309
+I
Sbjct: 421 YI 422
>gi|403519410|ref|YP_006653544.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei BPC006]
gi|403075053|gb|AFR16633.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei BPC006]
Length = 497
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 208 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 261
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 262 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLR 321
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 322 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 380
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 381 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 438
>gi|22327046|ref|NP_568461.2| cryptochrome DASH [Arabidopsis thaliana]
gi|119390180|pdb|2IJG|X Chain X, Crystal Structure Of Cryptochrome 3 From Arabidopsis
Thaliana
gi|238828067|pdb|2VTB|A Chain A, Structure Of Cryptochrome 3 - Dna Complex
gi|238828069|pdb|2VTB|C Chain C, Structure Of Cryptochrome 3 - Dna Complex
gi|238828070|pdb|2VTB|D Chain D, Structure Of Cryptochrome 3 - Dna Complex
gi|238828071|pdb|2VTB|E Chain E, Structure Of Cryptochrome 3 - Dna Complex
gi|238828072|pdb|2VTB|F Chain F, Structure Of Cryptochrome 3 - Dna Complex
gi|18086429|gb|AAL57669.1| AT5g24850/F6A4_60 [Arabidopsis thaliana]
gi|20857182|gb|AAM26705.1| AT5g24850/F6A4_60 [Arabidopsis thaliana]
gi|332005986|gb|AED93369.1| cryptochrome DASH [Arabidopsis thaliana]
Length = 526
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 132/286 (46%), Gaps = 16/286 (5%)
Query: 28 PLTYHQF-QSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGL 86
P Y QF +S+ AK S P++ TP DD + VPTLE+LG + + +
Sbjct: 192 PDVYTQFRKSVEAKCSIRSSTRIPLS-----LGPTPSVDDWGD---VPTLEKLGVEPQEV 243
Query: 87 LPPT-WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFGCLST 143
+ GGE+ + R+ + +K + + K T +L T SP+L FGC+S
Sbjct: 244 TRGMRFVGGESAGVGRVFEYFWKKDLLKVY---KETRNGMLGPDYSTKFSPWLAFGCISP 300
Query: 144 RLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
R Y ++ + K + +L+WR++F + + N LG P VQ W +
Sbjct: 301 RFIYEEVQRYEKERVANNSTYWVLFELIWRDYFRFLSIKCGNSLFHLGGPRNVQGKWSQD 360
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
+ W +A+TG+P IDA M +L G++ + R V FL R D+ + W G + F+
Sbjct: 361 QKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVR-DMGLDWRMGAEWFET 419
Query: 264 LLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LLD D N G W + + + + K + DP G+++
Sbjct: 420 CLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYV 465
>gi|13476703|ref|NP_108272.1| blue light photoreceptor cryptochrome [Mesorhizobium loti
MAFF303099]
gi|14027464|dbj|BAB53733.1| blue light photoreceptor cryptochrome [Mesorhizobium loti
MAFF303099]
Length = 477
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 106/224 (47%), Gaps = 11/224 (4%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLF 146
L TW GE A RL + +E +A++ R + P S + LSP L FG ++
Sbjct: 204 LRETWTPGEKGAQARLGQFIEHG--LANYERQRDYPGQ--PSTSRLSPHLTFGEITPFQI 259
Query: 147 YHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEA 206
+ L R K+ ++ WREF Y NP+ P + W ++ A
Sbjct: 260 FAAL-----RRSKSSGTSKFRAEIGWREFSYHLLFHNPDLSGRNFRPEFDAMSWRDDIRA 314
Query: 207 LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLL 266
L W TG+P +DA M +L GW+H+ R VA FL + DL + W G K F + L+
Sbjct: 315 LRTWQRGLTGYPIVDAGMRELWRTGWMHNRVRMIVASFLIK-DLMIDWRHGEKWFWDTLV 373
Query: 267 DADWSVNAGMWMWLSCSSFF-QQFFHCYCPVKFGRKADPNGDFI 309
DAD + N W W++ S +F + PV G K DP+GD++
Sbjct: 374 DADAANNPASWQWVAGSGADPAPYFRIFNPVLQGEKFDPHGDYV 417
>gi|410027954|ref|ZP_11277790.1| DASH family cryptochrome [Marinilabilia sp. AK2]
Length = 474
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 111/242 (45%), Gaps = 9/242 (3%)
Query: 73 VPTLEELGF---DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ 129
+P L G D+ +KGGETE +RRL+ + + + + K T LL +
Sbjct: 189 LPRLSTFGLKEPDLSSRAVLVFKGGETEGIRRLQTYFWEQDLLKEY---KETRNGLLGAD 245
Query: 130 --TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFD 187
+ S ++ GCLS R Y ++ + K KK L +L+WR++F ++ N
Sbjct: 246 YSSKFSAWISLGCLSPRYIYEEVKRYEKERKKNQSTYWLIFELIWRDYFRFICKKHGNKV 305
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
LG W N KWA QTG P+IDA M +L E G++ + R VA FL
Sbjct: 306 FQLGGIKNNVDKWSRNENHFWKWALGQTGIPFIDANMRELNETGFMSNRGRQNVASFLV- 364
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G F+ L+D D N G WM+++ + + ++ + D GD
Sbjct: 365 NDLGIDWRWGAMYFESQLVDYDVCSNWGNWMYVAGVGNDPRENRYFNIMRQAQNYDRKGD 424
Query: 308 FI 309
FI
Sbjct: 425 FI 426
>gi|302541523|ref|ZP_07293865.1| deoxyribodipyrimidine photolyase [Streptomyces hygroscopicus ATCC
53653]
gi|302459141|gb|EFL22234.1| deoxyribodipyrimidine photolyase [Streptomyces himastatinicus ATCC
53653]
Length = 445
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 92 KGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA--SQTGLSPFLRFGCLSTRLFYHD 149
+GGE RRL+ AW+ S Q LA + + LSP+L FGCLS H
Sbjct: 202 EGGERAGRRRLD------AWLRSGLGAYADRQDDLAGDATSRLSPYLHFGCLSPVELVHR 255
Query: 150 LNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAK 209
K P + QL WR+F + P+ P + W + A+A
Sbjct: 256 ARK-----SGGPGADAFVRQLAWRDFHHQVLAARPDASHTDYRPRGDR--WRSDDAAVAA 308
Query: 210 WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDAD 269
W +TG+P +DA M QL EGW+H+ AR VA FLT+ L+V W G + F +LL+D D
Sbjct: 309 WKAGRTGYPIVDAGMRQLAAEGWMHNRARLLVASFLTK-TLYVDWRVGARHFLDLLVDGD 367
Query: 270 WSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N W W++ + + P+ R+ DP+G ++
Sbjct: 368 VANNQLNWQWVAGTGTDTRPNRVLNPLAQARRFDPDGTYV 407
>gi|119944756|ref|YP_942436.1| deoxyribodipyrimidine photo-lyase [Psychromonas ingrahamii 37]
gi|119863360|gb|ABM02837.1| deoxyribodipyrimidine photo-lyase type I [Psychromonas ingrahamii
37]
Length = 453
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 90 TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHD 149
W GET A+RRL L + + + + P L +GLS +L+FG +S + ++
Sbjct: 193 AWPAGETAALRRLRHFLLQD--IEDYHHNRDIPS--LDGTSGLSAYLKFGVISAKRCVYE 248
Query: 150 LNKLYKRIKKAPPP--LSLHGQLLWREFFYCAATRNP------NFDRMLGNPICVQIPWD 201
+ + A S +++WREF+ NP NF+++ N I W
Sbjct: 249 VLAAFPDALDAQDSSVFSWINEIVWREFYRHLMIFNPQLCKGKNFNKLADN-----ITWS 303
Query: 202 VNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIF 261
N + W +TG+ +DA M QL + GW+H+ R A FLT+ L + W G F
Sbjct: 304 NNPDDFKAWCEGRTGYGLVDAAMRQLNQTGWMHNRLRMVTASFLTK-HLLIDWRWGEAYF 362
Query: 262 DELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
E L+D D + N G W W + + Q +F + P+ +K DP G FI
Sbjct: 363 REHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPIIQSQKFDPKGLFI 411
>gi|226946177|ref|YP_002801250.1| Deoxyribodipyrimidine photolyase [Azotobacter vinelandii DJ]
gi|226721104|gb|ACO80275.1| Deoxyribodipyrimidine photolyase [Azotobacter vinelandii DJ]
Length = 468
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 106/223 (47%), Gaps = 13/223 (5%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GE A RRL +E + +A++ + P S+ LSP+L G LS R H +
Sbjct: 203 WPAGEIAAQRRLHEFVENR--LAAYAEARDFPAEPGTSR--LSPYLAAGVLSPRQCLHAV 258
Query: 151 NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNMEAL 207
L P + +LLWREF+ +P +G + + +PW + L
Sbjct: 259 --LRTGGFDRPEASAWFDELLWREFYKHILAGHPRVS--MGRALRTETEALPWRDAPQEL 314
Query: 208 AKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLD 267
A W +TGFP IDA M QL GW+H+ R VA FL++ +L + W G + F L+D
Sbjct: 315 AAWQQGRTGFPLIDAAMRQLLATGWMHNRLRMVVAMFLSK-NLLIDWRHGERWFMHHLID 373
Query: 268 ADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
D + N G W W S + +F + P+ R+ DP G FI
Sbjct: 374 GDLAANNGGWQWCASTGTDAVPYFRLFNPLAQSRRFDPEGRFI 416
>gi|381405296|ref|ZP_09929980.1| deoxyribodipyrimidine photolyase [Pantoea sp. Sc1]
gi|380738495|gb|EIB99558.1| deoxyribodipyrimidine photolyase [Pantoea sp. Sc1]
Length = 474
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 86 LLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRL 145
L PP GET A++RL RH ++ P L + + LS +L G LS R
Sbjct: 202 LFPP----GETAALKRL-RHFAKQP---VLDYPDKRDLPALDATSRLSVYLATGVLSPRQ 253
Query: 146 FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV---QIPWDV 202
H + + + + +L+WREF+ P+ R P ++ W
Sbjct: 254 CLHRVLHEHPDVLDNSRAFTWLNELIWREFYRHLLVAYPSLCRH--KPFVDWTHRVEWQS 311
Query: 203 NMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFD 262
N W +TGFP +DA M Q++E GW+H+ R A FL + DL + W EG + F
Sbjct: 312 NEAHFDAWKAGKTGFPIVDAAMRQMKEMGWMHNRLRMITASFLVK-DLLIDWREGERYFM 370
Query: 263 ELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ L+D D + N G W W S + +F + P G + DP GDFI
Sbjct: 371 QQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGDFI 418
>gi|258622171|ref|ZP_05717197.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio mimicus VM573]
gi|424808742|ref|ZP_18234131.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio mimicus SX-4]
gi|258585495|gb|EEW10218.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio mimicus VM573]
gi|342323694|gb|EGU19477.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio mimicus SX-4]
Length = 469
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 93/185 (50%), Gaps = 13/185 (7%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQ-----LLWREFFYCAATRNPNF 186
LSP+L G LS R + +LY+ + A LS Q L+WREF+ PN
Sbjct: 239 LSPYLAIGALSAR---QCVARLYR--ESAMSALSEGAQVWLSELIWREFYQHLVAIEPNI 293
Query: 187 DRMLGN-PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
+ ++ W + E +W TG+P +DA M QL + GW+H+ R VA FL
Sbjct: 294 SKSRDFLEWGARLEWWNDSEKFQRWCEGNTGYPIVDAAMRQLNQTGWMHNRLRMIVASFL 353
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADP 304
T+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K DP
Sbjct: 354 TK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDP 412
Query: 305 NGDFI 309
NGDFI
Sbjct: 413 NGDFI 417
>gi|222096635|ref|YP_002530692.1| deoxyribodipyrimidine photolyase [Bacillus cereus Q1]
gi|221240693|gb|ACM13403.1| deoxyribodipyrimidine photolyase [Bacillus cereus Q1]
Length = 476
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTFKKFFSSKLVSYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDLNKLYKRIKKAPPPL-----SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L YH L + K +K S Q +WREF Y P N P
Sbjct: 247 LMYHYL--INKSNEKQCSLFEQQVNSFIRQFIWREFSYYLLYHYPFTVYKPLNKNFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNNEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 414
>gi|448639842|ref|ZP_21676990.1| deoxyribodipyrimidine photolyase [Haloarcula sinaiiensis ATCC
33800]
gi|445762369|gb|EMA13590.1| deoxyribodipyrimidine photolyase [Haloarcula sinaiiensis ATCC
33800]
Length = 465
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 113/243 (46%), Gaps = 14/243 (5%)
Query: 72 GVPTLEELGFDI-EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+PTL +LGF+ E +P G EA L+ L+ V + + P S+
Sbjct: 174 ALPTLADLGFEEPEADVP---AAGTEEARALLDDFLDEN--VYEYEERRDFPADECTSR- 227
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFD 187
LS L+FG + R Y D + K S+ QL WREF+ +P+
Sbjct: 228 -LSAHLKFGTIGIREVY-DRTQAAKEGTGGDRRDSVREFQSQLAWREFYTQVLFAHPHVV 285
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
I W+ + E L W + TG+P +DA M QLREE ++H+ R VA FLT+
Sbjct: 286 SSNYKSYENPIEWENDEELLQAWKDGDTGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK 345
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNG 306
DL + W G + F E L+D D + + G W W S + Q +F + P+ G DPN
Sbjct: 346 -DLLIDWRHGYEWFREKLVDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGEDYDPNA 404
Query: 307 DFI 309
++I
Sbjct: 405 EYI 407
>gi|262164645|ref|ZP_06032383.1| deoxyribodipyrimidine photolyase [Vibrio mimicus VM223]
gi|262027025|gb|EEY45692.1| deoxyribodipyrimidine photolyase [Vibrio mimicus VM223]
Length = 469
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 93/185 (50%), Gaps = 13/185 (7%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQ-----LLWREFFYCAATRNPNF 186
LSP+L G LS R + +LY+ + A LS Q L+WREF+ PN
Sbjct: 239 LSPYLAIGALSAR---QCVARLYR--ESAMSALSEGAQVWLSELIWREFYQHLVAIEPNI 293
Query: 187 DRMLGN-PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
+ ++ W + E +W TG+P +DA M QL + GW+H+ R VA FL
Sbjct: 294 SKSRDFLEWGARLEWWNDSEKFQRWCEGNTGYPIVDAAMRQLNQTGWMHNRLRMIVASFL 353
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADP 304
T+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K DP
Sbjct: 354 TK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDP 412
Query: 305 NGDFI 309
NGDFI
Sbjct: 413 NGDFI 417
>gi|121601607|ref|YP_993682.1| deoxyribodipyrimidine photolyase [Burkholderia mallei SAVP1]
gi|126448880|ref|YP_001081232.1| deoxyribodipyrimidine photolyase [Burkholderia mallei NCTC 10247]
gi|238562973|ref|ZP_00439583.2| deoxyribodipyrimidine photolyase [Burkholderia mallei GB8 horse 4]
gi|254178225|ref|ZP_04884880.1| deoxyribodipyrimidine photolyase [Burkholderia mallei ATCC 10399]
gi|254199318|ref|ZP_04905684.1| deoxyribodipyrimidine photolyase [Burkholderia mallei FMH]
gi|254205631|ref|ZP_04911983.1| deoxyribodipyrimidine photolyase [Burkholderia mallei JHU]
gi|121230417|gb|ABM52935.1| deoxyribodipyrimidine photolyase [Burkholderia mallei SAVP1]
gi|126241750|gb|ABO04843.1| deoxyribodipyrimidine photolyase [Burkholderia mallei NCTC 10247]
gi|147748914|gb|EDK55988.1| deoxyribodipyrimidine photolyase [Burkholderia mallei FMH]
gi|147753074|gb|EDK60139.1| deoxyribodipyrimidine photolyase [Burkholderia mallei JHU]
gi|160699264|gb|EDP89234.1| deoxyribodipyrimidine photolyase [Burkholderia mallei ATCC 10399]
gi|238521576|gb|EEP85026.1| deoxyribodipyrimidine photolyase [Burkholderia mallei GB8 horse 4]
Length = 486
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 197 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 250
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 251 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLR 310
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 311 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 369
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 370 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 427
>gi|423605178|ref|ZP_17581071.1| hypothetical protein IIK_01759 [Bacillus cereus VD102]
gi|401244326|gb|EJR50690.1| hypothetical protein IIK_01759 [Bacillus cereus VD102]
Length = 476
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTFKKFFSSKLVSYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDLNKLYKRIKKAPPPL-----SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L YH L + K +K S Q +WREF Y P N P
Sbjct: 247 LIYHYL--INKSNEKQCSLFEQQVNSFIRQFIWREFSYYLLYHYPFTVYKPLNKNFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNNEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 414
>gi|317148478|ref|XP_001822264.2| deoxyribodipyrimidine photo-lyase [Aspergillus oryzae RIB40]
Length = 588
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 115/251 (45%), Gaps = 27/251 (10%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
G P + L + + GE E + RLE LE KA R ++ Q+ +
Sbjct: 293 GAPNNKRLSDEEREHFRQLYPAGEHEGLDRLESFLEEKATAYDDMRNSLSKQTT----SV 348
Query: 132 LSPFLRFGCLSTRLFYH----------DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAAT 181
LSP+ G LS R D N+L +S ++ WR+F+
Sbjct: 349 LSPYFASGSLSARTAVAKAKKANKNQLDRNEL--------GFVSWISEVAWRDFYKHVLV 400
Query: 182 RNPNFDRMLG--NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
R P F M P + W+ NM+ W +TGFP +DA M Q++ W+H+ +R
Sbjct: 401 RWP-FICMNKCFKPEFTDLEWEYNMDYFNAWCEGRTGFPIVDAAMRQMKSSAWMHNRSRM 459
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFF-QQFFHCYCPVKF 298
VA FL++ DL + W G + F E L+D D++ N G W + S + Q +F + P++
Sbjct: 460 IVASFLSK-DLLIDWRRGERYFMEHLIDGDFASNHGGWGFGSSTGVDPQPYFRIFSPLRQ 518
Query: 299 GRKADPNGDFI 309
+ DP+GD+I
Sbjct: 519 SERFDPDGDYI 529
>gi|398889396|ref|ZP_10643239.1| deoxyribodipyrimidine photolyase [Pseudomonas sp. GM55]
gi|398189518|gb|EJM76792.1| deoxyribodipyrimidine photolyase [Pseudomonas sp. GM55]
Length = 485
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 105/237 (44%), Gaps = 15/237 (6%)
Query: 83 IEGLLPPT------WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
IEG P W GETEA RRL + A + + + P SQ LS +L
Sbjct: 188 IEGFATPADNLRQLWPAGETEARRRLNSFTD--AQIDHYQNERDFPAKPGTSQ--LSAYL 243
Query: 137 RFGCLSTRLFYHD-LNKLYKRIKKAPP-PLSLHGQLLWREFFYCAATRNPNFDRMLG-NP 193
G +S R H LN + ++ +LLWREF+ P R P
Sbjct: 244 AAGVISPRQCLHAALNNNQGEFESGKTGAVTWINELLWREFYKHILVGYPRVSRHRAFRP 303
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+ W E LA W +TG P IDA M QL GW+H+ R VA FLT+ +L +
Sbjct: 304 ETEALAWRNAPEELAAWQQGRTGLPIIDAAMRQLLATGWMHNRLRMVVAMFLTK-NLLID 362
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
W EG + F + L+D D + N G W W S + +F + P+ K DP G FI
Sbjct: 363 WREGERFFMQHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSEKFDPEGLFI 419
>gi|254428910|ref|ZP_05042617.1| deoxyribodipyrimidine photolyase family [Alcanivorax sp. DG881]
gi|196195079|gb|EDX90038.1| deoxyribodipyrimidine photolyase family [Alcanivorax sp. DG881]
Length = 501
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 7/225 (3%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLF 146
L W GE A ++L++ +E+ +A + R + P +A +GLS L G LS
Sbjct: 207 LTQQWLPGEEAAWQQLDQFVEQA--LAGYRRQRDFPD--IAGTSGLSAALSAGALSVASC 262
Query: 147 YHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNME 205
Y ++ G+L WR+F+ + P R P + WD + E
Sbjct: 263 YRAASQAMADAGSRDGATCWIGELAWRDFYRQIMAQFPRVSRGQAFRPETDLLQWDQDDE 322
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
A W +TG+P +DA M QL GW+H+ R A FL++ LW+ W G F L
Sbjct: 323 RFAAWCEGRTGYPLVDAAMRQLVATGWMHNRLRMVTAMFLSK-HLWLDWRRGEAFFMAHL 381
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D++ N G W W S + +F + PV+ G++ D G FI
Sbjct: 382 MDGDFAANNGGWQWSASAGTDAVPYFRVFNPVRQGQRFDSEGRFI 426
>gi|298708263|emb|CBJ48326.1| cryptochrome 3 [Ectocarpus siliculosus]
Length = 549
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 24/283 (8%)
Query: 40 KMDSPSPAEAPVTPL---LVRQATTPLRDDHDEKYGVPTLEELGF------DIEGLLPPT 90
K+ SP P +P PL L A TP +PT EELG D +L
Sbjct: 202 KIRSPVPLPSPFRPLPAGLHDNAVTPTL-----TVAIPTTEELGLGTAPERDARSVL--H 254
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS--QTGLSPFLRFGCLSTRLFYH 148
+ GGET +RR++ ++ + + + K+T LL + SP+L GCLS R
Sbjct: 255 FIGGETAGLRRVQTYIWEEDHLREY---KVTRNGLLGGGFSSKFSPWLALGCLSPRTIVK 311
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP--ICVQIPWDVNMEA 206
++ K L +LL R+FF +A + N LG + W +
Sbjct: 312 EIRKYETDRIANDSTYWLIFELLVRDFFRYSAVKYGNAIFHLGGSRRDSDRQTWRDDAGL 371
Query: 207 LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLL 266
LA W +TG+P++DA M +L+ G++ + R VA F T+ DL + W G + F+E LL
Sbjct: 372 LAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTK-DLEMDWRLGAEHFEEYLL 430
Query: 267 DADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
D D + N G W +++ F + + K R D +GD++
Sbjct: 431 DYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDADGDYV 473
>gi|70990122|ref|XP_749910.1| deoxyribodipyrimidine photo-lyase Phr1 [Aspergillus fumigatus
Af293]
gi|66847542|gb|EAL87872.1| deoxyribodipyrimidine photo-lyase Phr1, putative [Aspergillus
fumigatus Af293]
gi|159130392|gb|EDP55505.1| deoxyribodipyrimidine photo-lyase Phr1, putative [Aspergillus
fumigatus A1163]
Length = 586
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 118/245 (48%), Gaps = 15/245 (6%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
P ++L + + L + GE EA+RRLE LE K GR +++++ QT
Sbjct: 292 AAPEHKQLSEEEKQHLGHLYPAGEHEALRRLEAFLEEK------GRDYAEERNMVSGQTT 345
Query: 132 --LSPFLRFGCLSTRLFYHDLNKLYK-RIKKAPPPLSL-HGQLLWREFFYCAATRNPNFD 187
LSP+ G LS R + K ++ P L G++ WREF+ P F
Sbjct: 346 SILSPYFASGLLSARTAIEHARRANKGSLQHGDPGLVRWIGEVAWREFYRHVLVHWP-FI 404
Query: 188 RMLG--NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
M P + W+ + W +TGFP +DA M Q +++ W+H+ R VA FL
Sbjct: 405 CMNKCFKPEFTNLEWEYEEDRFTAWREGKTGFPIVDAAMRQAKQDKWMHNRTRMIVASFL 464
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFF-QQFFHCYCPVKFGRKADP 304
++ DL + W G + F E L+D D++ N G W + S + Q +F + P+ + DP
Sbjct: 465 SK-DLLLDWRRGERYFMETLIDGDFASNHGGWGFGSSTGVDPQPYFRIFNPLLQSERFDP 523
Query: 305 NGDFI 309
+G++I
Sbjct: 524 DGEYI 528
>gi|83770999|dbj|BAE61131.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391865291|gb|EIT74581.1| deoxyribodipyrimidine photolyase [Aspergillus oryzae 3.042]
Length = 624
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 115/251 (45%), Gaps = 27/251 (10%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
G P + L + + GE E + RLE LE KA R ++ Q+ +
Sbjct: 329 GAPNNKRLSDEEREHFRQLYPAGEHEGLDRLESFLEEKATAYDDMRNSLSKQTT----SV 384
Query: 132 LSPFLRFGCLSTRLFYH----------DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAAT 181
LSP+ G LS R D N+L +S ++ WR+F+
Sbjct: 385 LSPYFASGSLSARTAVAKAKKANKNQLDRNEL--------GFVSWISEVAWRDFYKHVLV 436
Query: 182 RNPNFDRMLG--NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
R P F M P + W+ NM+ W +TGFP +DA M Q++ W+H+ +R
Sbjct: 437 RWP-FICMNKCFKPEFTDLEWEYNMDYFNAWCEGRTGFPIVDAAMRQMKSSAWMHNRSRM 495
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFF-QQFFHCYCPVKF 298
VA FL++ DL + W G + F E L+D D++ N G W + S + Q +F + P++
Sbjct: 496 IVASFLSK-DLLIDWRRGERYFMEHLIDGDFASNHGGWGFGSSTGVDPQPYFRIFSPLRQ 554
Query: 299 GRKADPNGDFI 309
+ DP+GD+I
Sbjct: 555 SERFDPDGDYI 565
>gi|258624237|ref|ZP_05719186.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio mimicus VM603]
gi|258583388|gb|EEW08188.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio mimicus VM603]
Length = 469
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 93/185 (50%), Gaps = 13/185 (7%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQ-----LLWREFFYCAATRNPNF 186
LSP+L G LS R + +LY+ + A LS Q L+WREF+ PN
Sbjct: 239 LSPYLAIGALSAR---QCVARLYR--ESAMSALSEGAQVWLSELIWREFYQHLVAIEPNI 293
Query: 187 DRMLGN-PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
+ ++ W + E +W TG+P +DA M QL + GW+H+ R VA FL
Sbjct: 294 SKSRDFLEWGARLEWWNDSEKFQRWCEGNTGYPIVDAAMRQLNQTGWMHNRLRMIVASFL 353
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADP 304
T+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K DP
Sbjct: 354 TK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDP 412
Query: 305 NGDFI 309
NGDFI
Sbjct: 413 NGDFI 417
>gi|423413073|ref|ZP_17390193.1| hypothetical protein IE1_02377 [Bacillus cereus BAG3O-2]
gi|423431142|ref|ZP_17408146.1| hypothetical protein IE7_02958 [Bacillus cereus BAG4O-1]
gi|401102633|gb|EJQ10619.1| hypothetical protein IE1_02377 [Bacillus cereus BAG3O-2]
gi|401118167|gb|EJQ25999.1| hypothetical protein IE7_02958 [Bacillus cereus BAG4O-1]
Length = 476
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W E A + ++ K S GR P S+LA+ +L FG +S +
Sbjct: 193 MEAIWDPTEEGAYKTFKKFFSSKLVSYSEGRDFPDQNVHSMLAT------YLSFGQISVK 246
Query: 145 LFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L +H L NK +R +K S QL+WREF Y P N P
Sbjct: 247 LMFHYLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNKEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|421877716|ref|ZP_16309257.1| Deoxyribodipyrimidine photolyase [Leuconostoc citreum LBAE C10]
gi|372556494|emb|CCF25377.1| Deoxyribodipyrimidine photolyase [Leuconostoc citreum LBAE C10]
Length = 478
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 124/280 (44%), Gaps = 40/280 (14%)
Query: 44 PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPP----------TWKG 93
P+P + VT L +Q + +E L EGLL +
Sbjct: 162 PTPVKVSVTSLQEKQ--------------MANIEPLHLHQEGLLTSLINEKHDKQLVGQV 207
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE +A++ L+ ++ + +A + + P L + + LS +LR G ++ R +
Sbjct: 208 GEAKALQTLKDFIQ--SHLAEYDTQRDLP--FLDATSHLSRYLRTGEIAIR-------TI 256
Query: 154 YKRIKKAPPP---LSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
Y+ + P + +L WR+++ NP + P +I W N W
Sbjct: 257 YQAVINEPESEGQQTFIKELAWRDYYNMIYAMNPQQNTQSLRPEFQKIAWRNNHNDFLLW 316
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
QTGFP +DA M QL + GW+H+ R VA FLT+ DL + W G + F + LLD D
Sbjct: 317 QTGQTGFPIVDAAMRQLNQTGWMHNRLRMIVASFLTK-DLLIDWRWGEQYFHDQLLDYDP 375
Query: 271 SVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G W W S + +F + P + +K DP+G FI
Sbjct: 376 ASNIGGWQWAASTGTDSVPYFRIFNPTRQSQKFDPDGQFI 415
>gi|97047673|sp|Q84KJ5.2|CRYD_ARATH RecName: Full=Cryptochrome DASH, chloroplastic/mitochondrial;
AltName: Full=Cryptochrome-3; Flags: Precursor
Length = 569
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 132/286 (46%), Gaps = 16/286 (5%)
Query: 28 PLTYHQF-QSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGL 86
P Y QF +S+ AK S P++ TP DD + VPTLE+LG + + +
Sbjct: 235 PDVYTQFRKSVEAKCSIRSSTRIPLS-----LGPTPSVDDWGD---VPTLEKLGVEPQEV 286
Query: 87 LPPT-WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA--SQTGLSPFLRFGCLST 143
+ GGE+ + R+ + +K + + K T +L T SP+L FGC+S
Sbjct: 287 TRGMRFVGGESAGVGRVFEYFWKKDLLKVY---KETRNGMLGPDYSTKFSPWLAFGCISP 343
Query: 144 RLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
R Y ++ + K + +L+WR++F + + N LG P VQ W +
Sbjct: 344 RFIYEEVQRYEKERVANNSTYWVLFELIWRDYFRFLSIKCGNSLFHLGGPRNVQGKWSQD 403
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
+ W +A+TG+P IDA M +L G++ + R V FL R D+ + W G + F+
Sbjct: 404 QKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVR-DMGLDWRMGAEWFET 462
Query: 264 LLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LLD D N G W + + + + K + DP G+++
Sbjct: 463 CLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYV 508
>gi|53725670|ref|YP_102418.1| deoxyribodipyrimidine photolyase [Burkholderia mallei ATCC 23344]
gi|52429093|gb|AAU49686.1| deoxyribodipyrimidine photolyase [Burkholderia mallei ATCC 23344]
Length = 497
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 208 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 261
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 262 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLR 321
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 322 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 380
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 381 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 438
>gi|398952323|ref|ZP_10674712.1| deoxyribodipyrimidine photolyase [Pseudomonas sp. GM33]
gi|398155251|gb|EJM43701.1| deoxyribodipyrimidine photolyase [Pseudomonas sp. GM33]
Length = 480
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 106/239 (44%), Gaps = 15/239 (6%)
Query: 81 FDIEGLLPP------TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+EG P W GETEA RRL+ E A + + + P SQ LS
Sbjct: 186 LSVEGFATPGDPLSSLWPAGETEARRRLDSFSE--AQIDHYQNERDFPAKPGTSQ--LSA 241
Query: 135 FLRFGCLSTRLFYHD-LNKLYKRIKKAPP-PLSLHGQLLWREFFYCAATRNPNFDRMLG- 191
+L G +S R H LN + ++ +LLWREF+ P R
Sbjct: 242 YLAAGVISPRQCLHAALNSNQGEFESGNTGAVTWINELLWREFYKHILVGYPRVSRHRAF 301
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
P + W + LA W A+TG P IDA M QL GW+H+ R VA FLT+ +L
Sbjct: 302 RPETEALAWRNAPDELAAWQQARTGLPIIDAAMRQLLATGWMHNRLRMVVAMFLTK-NLL 360
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
+ W EG + F L+D D + N G W W S + +F + P+ K DP G FI
Sbjct: 361 IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSEKFDPEGVFI 419
>gi|169236101|ref|YP_001689301.1| deoxyribodipyrimidine photo-lyase [Halobacterium salinarum R1]
gi|47117035|sp|Q9HQ46.2|PHR_HALSA RecName: Full=Deoxyribodipyrimidine photo-lyase; AltName: Full=DNA
photolyase; AltName: Full=Photoreactivating enzyme
gi|148793|gb|AAA72749.1| photolyase (EC 4.1.99.3) [Halobacterium salinarum]
gi|167727167|emb|CAP13953.1| deoxyribodipyrimidine photolyase [Halobacterium salinarum R1]
Length = 481
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 111/246 (45%), Gaps = 20/246 (8%)
Query: 73 VPTLEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
+P+++ELGF + E +P T A R L + + + P S+
Sbjct: 189 LPSVQELGFAEPEAAVP----DAGTAAARSLLDAFRESGDIYRYEDRRDYPHEEPTSR-- 242
Query: 132 LSPFLRFGCLSTRLFYH-------DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNP 184
LSP L+FG + R Y D + +R A + GQL WREF+ N
Sbjct: 243 LSPHLKFGTIGIRTVYEAARAAKSDADTDDERENVA----AFIGQLAWREFYAQVLYFNQ 298
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
N I W + AL W + +TG+P +DA M QLR E ++H+ R VA F
Sbjct: 299 NVVSENFKAYEHPIEWRDDPAALQAWKDGETGYPIVDAGMRQLRAEAYMHNRVRMIVAAF 358
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKAD 303
LT+ DL V W G F E L D D + + G W W S + Q +F + P+ G + D
Sbjct: 359 LTK-DLLVDWRAGYDWFREKLADHDTANDNGGWQWAASTGTDAQPYFRVFNPMTQGERYD 417
Query: 304 PNGDFI 309
P+ D+I
Sbjct: 418 PDADYI 423
>gi|428320773|ref|YP_007118655.1| deoxyribodipyrimidine photo-lyase type I [Oscillatoria
nigro-viridis PCC 7112]
gi|428244453|gb|AFZ10239.1| deoxyribodipyrimidine photo-lyase type I [Oscillatoria
nigro-viridis PCC 7112]
Length = 484
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 108/240 (45%), Gaps = 10/240 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
VPT LGF E P + GE A ++LE +R + + + P SQ L
Sbjct: 199 VPTALSLGFIWEN--PLVIEPGEDAAQQKLEEFCDRA--IYEYQGQRNFPAINGTSQ--L 252
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRM 189
S L+FG + R + + + S+ ++ WREF+ A P
Sbjct: 253 SAALKFGAIGIRTVWQATQIVMDTCRSEEACTSIRTWQQEIAWREFYQHAMYNFPELADG 312
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
PW+ + + W +TG+P IDA M QL + GW+H+ R VA FLT+ D
Sbjct: 313 PYRQAFKDFPWENDEKLFQAWCRGKTGYPIIDAAMRQLNQTGWMHNRCRMIVASFLTK-D 371
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L ++W+ G K F + L+D D S N G W W + S + + P +K DP G++I
Sbjct: 372 LMINWQWGEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPLRIFNPGSQAQKFDPEGEYI 431
>gi|409200723|ref|ZP_11228926.1| deoxyribodipyrimidine photolyase [Pseudoalteromonas flavipulchra
JG1]
Length = 459
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 14/252 (5%)
Query: 62 PLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMT 121
PL H+ + PT E+ E W + + + R ++ K +A + +
Sbjct: 167 PLDKQHEANFKKPTFFEMTNGSE-----KWPVDDNAVVTIVNRFIKDK--LADYQDDRDF 219
Query: 122 PQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAP--PPLSLHGQLLWREFFYCA 179
P + +GLSP+L G +S + ++ Y + + P P +L+WREF+
Sbjct: 220 PA--IKGTSGLSPYLALGIVSPKQLIAEIQLHYPEVLENPSKPEFCWVNELIWREFYRHL 277
Query: 180 ATRNPNFDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
P + N + W + +A W N QTG+P +DA M +L + GW+H+ R
Sbjct: 278 IVAFPRLCKGFNFNDKYNAVRWRDDSQAFELWCNGQTGYPIVDAAMRKLNKTGWMHNRLR 337
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVK 297
VA FLT+ L + W +G F L+D D + N G W W + + Q +F + P+
Sbjct: 338 MIVASFLTK-HLLIDWRKGEAYFMSKLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPIT 396
Query: 298 FGRKADPNGDFI 309
K DP+G FI
Sbjct: 397 QSEKFDPDGSFI 408
>gi|254828345|ref|ZP_05233032.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes FSL
N3-165]
gi|258600738|gb|EEW14063.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes FSL
N3-165]
Length = 467
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 103/225 (45%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL ++ VA + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDSGEKTANTRLANFIKHD--VADYDKARDFPE--LDKTSHLSRYLRTGEISVRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A +L WR+F+ PN PI I W+ N E
Sbjct: 245 ALQENEATEGRA----IFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMVTASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K DP G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTIQSQKFDPTGKFI 401
>gi|71909505|ref|YP_287092.1| deoxyribodipyrimidine photo-lyase type I [Dechloromonas aromatica
RCB]
gi|71849126|gb|AAZ48622.1| deoxyribodipyrimidine photo-lyase type I [Dechloromonas aromatica
RCB]
Length = 470
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 110/250 (44%), Gaps = 30/250 (12%)
Query: 69 EKYGVPTLEELGF---DIEGL-LPPTWKGG----ETEAMRRLERHLERKAWVASFGRPKM 120
E G+PTLEE+GF D+ L + P G + + R+ER+ + + A G
Sbjct: 180 ELAGIPTLEEIGFTPTDLAELGIQPGMSGAKGLWDDFSRDRIERYGSLRDFPAVKG---- 235
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
+ LS LRFG +S R R A + +L+WR+F++
Sbjct: 236 --------VSYLSVHLRFGTISIRQLV--------RQALAHQADTWLSELIWRDFYFMIL 279
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
P+ P I W EA A W TG+P +DA M QL GW+H+ R
Sbjct: 280 DHFPHVAGHAFKPEYDAIQWASRPEAFAAWCEGCTGYPLVDAAMRQLNFSGWMHNRLRMV 339
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFG 299
VA FLT+ DL + W G K F E L D D S N G W W S S Q +F + PV
Sbjct: 340 VASFLTK-DLGIDWRLGEKYFAEQLNDFDLSANNGGWQWASSSGCDAQPYFRIFNPVTQS 398
Query: 300 RKADPNGDFI 309
K D G FI
Sbjct: 399 EKFDAEGKFI 408
>gi|315501047|ref|YP_004079934.1| deoxyribodipyrimidine photo-lyase [Micromonospora sp. L5]
gi|315407666|gb|ADU05783.1| Deoxyribodipyrimidine photo-lyase [Micromonospora sp. L5]
Length = 440
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 106/227 (46%), Gaps = 18/227 (7%)
Query: 84 EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG-LSPFLRFGCLS 142
+G P GGE A RRL AW+ + R + +T LSP+LRFGC+S
Sbjct: 185 KGDSPDAAVGGEAVARRRL------TAWLPTLDRYDDIHDDMAGDETSRLSPYLRFGCVS 238
Query: 143 TRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDV 202
+ R P QL WR+F++ P+ + + W
Sbjct: 239 P-------LAVATRAGGWDGPFVR--QLCWRDFYHQVVAGFPDLS-TVAYRRGAREDWRD 288
Query: 203 NMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFD 262
+ A WA +TG P +DA M QLR EGW+H+ AR A +LT+ L + W G++IF
Sbjct: 289 DPHAFDAWAEGRTGMPIVDAGMRQLRAEGWMHNRARLITAGYLTK-HLGLDWRPGLEIFF 347
Query: 263 ELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LLD D N+G W W++ + + + + PV+ + DP+G ++
Sbjct: 348 RWLLDGDRVNNSGNWQWVAGTGNDTRPYRGFNPVRQAERYDPDGAYV 394
>gi|390445350|ref|ZP_10233099.1| DASH family cryptochrome [Nitritalea halalkaliphila LW7]
gi|389662339|gb|EIM73907.1| DASH family cryptochrome [Nitritalea halalkaliphila LW7]
Length = 460
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 127/292 (43%), Gaps = 20/292 (6%)
Query: 25 GKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFD-- 82
G+TP + QF+ K PA L P D +PTL LG +
Sbjct: 134 GQTPEVFTQFRKECEKFSKIRPAYPAPDELYYPFPDVPKGD-------IPTLAVLGLEEP 186
Query: 83 ---IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLR 137
G+L ++GGE A+ RL+ + + + K T LL + + SP+L
Sbjct: 187 EVSDRGVL--VFEGGEGPALARLQTYFWENDCLKVY---KETRNGLLGADYSSKFSPWLA 241
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
GC+S R Y ++ + K KK L +L+WR++F A ++ N L
Sbjct: 242 LGCISPRYIYEEVARYEKERKKNQSTYWLVFELIWRDYFKFIAKKHGNKIFWLQGIKPNA 301
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
W N +W QTG P++DA M +L E G++ + R VA FL DL + W G
Sbjct: 302 EKWQRNEALFQRWVEGQTGIPFVDANMRELAETGFMSNRGRQNVASFLV-NDLNIDWRWG 360
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F+ +L+D D N G WM+++ + + +K + D GD++
Sbjct: 361 ASYFESVLIDYDVCSNWGNWMYVAGVGNDPRENRYFAILKQAKNYDAKGDYV 412
>gi|58039440|ref|YP_191404.1| deoxyribodipyrimidine photolyase [Gluconobacter oxydans 621H]
gi|58001854|gb|AAW60748.1| Deoxyribodipyrimidine photolyase [Gluconobacter oxydans 621H]
Length = 479
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 101/221 (45%), Gaps = 9/221 (4%)
Query: 90 TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHD 149
TW+ GE E LE L+ GR ++ + + LSP+L G +S R +
Sbjct: 209 TWEPGEAEGQEHLEDFLKNSVAGYPRGRDRVAEEGT----SRLSPYLASGAVSPRQVWAA 264
Query: 150 LNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAK 209
L K P +L WREF P +P + W + L
Sbjct: 265 LQKHGAHTDG---PRIFLSELGWREFARYTLYHLPKLPFENLSPKFSGMHWRRSAADLKA 321
Query: 210 WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDAD 269
W QTG P +DA M QL + GW+H+ AR V FLT+ L + W+EG F + L+DAD
Sbjct: 322 WQRGQTGVPIVDAGMRQLWQTGWMHNRARMIVGSFLTK-HLLIDWKEGDAWFRDTLVDAD 380
Query: 270 WSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
++ NA W W++ + FF + P + K DPNGD+I
Sbjct: 381 FANNAMNWQWVAGTGIEATPFFRIFNPTRQAEKFDPNGDYI 421
>gi|217965318|ref|YP_002350996.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes HCC23]
gi|386007316|ref|YP_005925594.1| phr [Listeria monocytogenes L99]
gi|386025906|ref|YP_005946682.1| putative deoxyribodipyrimidine photolyase [Listeria monocytogenes
M7]
gi|217334588|gb|ACK40382.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes HCC23]
gi|307570126|emb|CAR83305.1| phr [Listeria monocytogenes L99]
gi|336022487|gb|AEH91624.1| putative deoxyribodipyrimidine photolyase [Listeria monocytogenes
M7]
Length = 467
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 102/225 (45%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL ++ +A + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDSGERAANTRLANFIKHD--IADYDKARDFPE--LDKTSHLSRYLRTGEISIRTVWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + K + +L WR+F+ PN PI I W+ N E
Sbjct: 245 AL----QETKATEGRATFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K DP FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTAKFI 401
>gi|170017540|ref|YP_001728459.1| deoxyribodipyrimidine photolyase [Leuconostoc citreum KM20]
gi|169804397|gb|ACA83015.1| Deoxyribodipyrimidine photolyase [Leuconostoc citreum KM20]
Length = 478
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 125/280 (44%), Gaps = 40/280 (14%)
Query: 44 PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPP----------TWKG 93
P+P +A VT L +Q + +E L EGLL +
Sbjct: 162 PTPVKASVTSLQGKQ--------------MANIEPLHLHQEGLLTSLINEKHDKQLVGQV 207
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE +A++ L+ ++ + ++ + + P L + + LS +LR G ++ R +
Sbjct: 208 GEAKALQTLKDFIQ--SHLSEYDTQRDLP--FLDATSHLSRYLRTGEIAIR-------TI 256
Query: 154 YKRIKKAPPP---LSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
Y+ + P + +L WR+++ NP + P +I W N W
Sbjct: 257 YQAVINEPESEGQQTFIKELAWRDYYNMIYAMNPQQNTQSLRPEFQKIAWRNNHNDFLLW 316
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
QTGFP +DA M QL + GW+H+ R VA FLT+ DL + W G + F + LLD D
Sbjct: 317 QTGQTGFPIVDAAMRQLNQTGWMHNRLRMIVASFLTK-DLLIDWRWGEQYFHDQLLDYDP 375
Query: 271 SVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G W W S + +F + P + +K DP+G FI
Sbjct: 376 ASNIGGWQWAASTGTDSVPYFRIFNPTRQSQKFDPDGKFI 415
>gi|126439700|ref|YP_001059701.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 668]
gi|126219193|gb|ABN82699.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 668]
Length = 486
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 197 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 250
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 251 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTLLHHFPDLPRRNLR 310
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 311 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 369
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 370 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 427
>gi|256372081|ref|YP_003109905.1| deoxyribodipyrimidine photo-lyase [Acidimicrobium ferrooxidans DSM
10331]
gi|256008665|gb|ACU54232.1| Deoxyribodipyrimidine photo-lyase [Acidimicrobium ferrooxidans DSM
10331]
Length = 456
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 95 ETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLY 154
+ A+ RLER ++ + +A + + P +A+ + LSP L G + R L L
Sbjct: 186 QRTALERLERFVDSR--LAHYAADRDRPA--VAATSELSPALHIGAIHPRTILAALGDLD 241
Query: 155 KRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAK---WA 211
+ + +L WREF+ A +P+ + +P QI WD EA A+ W
Sbjct: 242 RADR-------FVRELAWREFYAHALWHHPDLVDLELDPTLRQIAWDEGDEADARFRAWC 294
Query: 212 NAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWS 271
+ +TGFP +DA M +L GW+H+ R VA L + DL + W G F+ L DAD +
Sbjct: 295 DGRTGFPIVDAGMRELAATGWLHNRVRMIVASLLVK-DLHLDWRRGAAWFEATLADADIA 353
Query: 272 VNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
N G W W++ + +F + P G+K DP+G ++
Sbjct: 354 SNRGNWQWVAGTGLDAAPYFRVFNPTLQGKKFDPDGHYV 392
>gi|229151347|ref|ZP_04279551.1| Deoxyribodipyrimidine photolyase [Bacillus cereus m1550]
gi|228632137|gb|EEK88762.1| Deoxyribodipyrimidine photolyase [Bacillus cereus m1550]
Length = 476
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 110/227 (48%), Gaps = 17/227 (7%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W E A + ++ K S GR P S+LA P+L F +S +L +H
Sbjct: 197 WDPTEEGAYKTFKKFFSSKLVSYSEGRDFPDQNVHSMLA------PYLSFSQISVKLMFH 250
Query: 149 DL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
L NK +R +K S QL+WREF Y P N PW+
Sbjct: 251 YLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKSFEHFPWNKE 308
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K F +
Sbjct: 309 EELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAKWFMD 367
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 368 TLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|448309458|ref|ZP_21499316.1| deoxyribodipyrimidine photolyase [Natronorubrum bangense JCM 10635]
gi|445589881|gb|ELY44104.1| deoxyribodipyrimidine photolyase [Natronorubrum bangense JCM 10635]
Length = 467
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 120/269 (44%), Gaps = 23/269 (8%)
Query: 46 PAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERH 105
P +AP + L + PL P+L LGF+ PP+ T+A R ER
Sbjct: 160 PVDAPASEALAAISGEPL----------PSLSALGFEEPSSTPPS----VTQAAAR-ERV 204
Query: 106 LER-KAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPL 164
E + + + P SQ LS L++G + R Y + R
Sbjct: 205 TEFCSGPIYRYADDRDKPAVDGTSQ--LSVHLKWGTIGIREVYEATVRAATRAATDDDRE 262
Query: 165 SLHG---QLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWID 221
S+ QL WREF+ NP + IPW + + L W +TG+P +D
Sbjct: 263 SVSAFQRQLAWREFYAHVLEFNPETVTENFSGYEHDIPWRQDPDELEAWKAGETGYPIVD 322
Query: 222 AIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL- 280
A M QL+ EGW+H+ R VA FLT+ DL + W EG F L D + + + G W W
Sbjct: 323 AGMRQLQAEGWMHNRVRMLVASFLTK-DLLIDWREGYDWFRAKLADHETANDVGGWQWAG 381
Query: 281 SCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
S + Q +F + P+K GR+ DP+ D+I
Sbjct: 382 STGTDAQPYFRVFNPMKQGREYDPDADYI 410
>gi|313126193|ref|YP_004036463.1| deoxyribodipyrimidine photo-lyase type i [Halogeometricum
borinquense DSM 11551]
gi|448286034|ref|ZP_21477270.1| deoxyribodipyrimidine photolyase [Halogeometricum borinquense DSM
11551]
gi|312292558|gb|ADQ67018.1| deoxyribodipyrimidine photo-lyase type I [Halogeometricum
borinquense DSM 11551]
gi|445575333|gb|ELY29809.1| deoxyribodipyrimidine photolyase [Halogeometricum borinquense DSM
11551]
Length = 469
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 110/242 (45%), Gaps = 13/242 (5%)
Query: 73 VPTLEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
+PT+EELGF D + + + G A RL E + + + P+ S+
Sbjct: 175 LPTIEELGFSDPDATIQ---EAGTEAARERLAAFCEDA--IYRYATDRDYPERNATSR-- 227
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDR 188
LS L++G + R Y + + S+ QL WREF+ NP+
Sbjct: 228 LSADLKWGTIGIREVYAATEEAAENADSDDEAKSVEEFQSQLAWREFYTHVLYFNPDVVT 287
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
I W + EAL W +TG+P +DA M QLREE ++H+ R VA FLT+
Sbjct: 288 QNYKEYENDIAWREDEEALTAWKEGRTGYPIVDAGMRQLREEAYMHNRMRMIVASFLTK- 346
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W EG F L D D + + G W W S + Q +F + P+ G + DP+
Sbjct: 347 DLLIDWREGYAHFRAYLADHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDAT 406
Query: 308 FI 309
+I
Sbjct: 407 YI 408
>gi|329764714|ref|ZP_08256309.1| Deoxyribodipyrimidine photolyase [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329138764|gb|EGG43005.1| Deoxyribodipyrimidine photolyase [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 451
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 93 GGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNK 152
GG A++ L+ E K + + P L T LS +RFG +S R Y + +
Sbjct: 197 GGRRNALKILKNISEYKNYQKTRDYPG------LDKTTKLSAHIRFGTISVREAYQAIKE 250
Query: 153 LYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWAN 212
+L QL WREFF PN +IPW N + W
Sbjct: 251 ------NLGIDHTLINQLYWREFFTYVLHHFPNSKSRTFKKKFRKIPWSTNKQEYHTWCK 304
Query: 213 AQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSV 272
+TGFP +DA M QL + G++H+ R VA FLT+ D+ + W+ G + F E L+D D +V
Sbjct: 305 GETGFPIVDAGMRQLNKTGFMHNRVRMIVASFLTK-DMHIDWKLGERYFAEKLVDYDPAV 363
Query: 273 NAGMWMWLS---CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
NAG W W + C + +F + P K D N ++I
Sbjct: 364 NAGNWQWAASTGCDAV--PYFRIFNPWIQQEKFDSNCNYI 401
>gi|344211748|ref|YP_004796068.1| deoxyribodipyrimidine photolyase [Haloarcula hispanica ATCC 33960]
gi|343783103|gb|AEM57080.1| deoxyribodipyrimidine photolyase [Haloarcula hispanica ATCC 33960]
Length = 465
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 110/242 (45%), Gaps = 12/242 (4%)
Query: 72 GVPTLEELGFDI-EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+PTL +LGFD E +P G EA L+ L V + + P S+
Sbjct: 174 ALPTLADLGFDEPEADVP---AAGTDEARALLDDFLAEN--VYEYEERRDFPADECTSR- 227
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDR 188
LS L+FG + R Y + + QL WREF+ +P+
Sbjct: 228 -LSAHLKFGTIGIREVYDRTEDAKEGTGGDRRESVREFQSQLAWREFYTQVLFAHPHVVS 286
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
I W+ + E L W + +TG+P +DA M QLREE ++H+ R VA FLT+
Sbjct: 287 SNYKSYENPIEWENDEELLQAWKDGETGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK- 345
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G + F E L+D D + + G W W S + Q +F + P+ G DP+ +
Sbjct: 346 DLLIDWRHGYEWFREKLVDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGEDYDPDAE 405
Query: 308 FI 309
+I
Sbjct: 406 YI 407
>gi|117919615|ref|YP_868807.1| deoxyribodipyrimidine photo-lyase type I [Shewanella sp. ANA-3]
gi|117611947|gb|ABK47401.1| Deoxyribodipyrimidine photo-lyase type I [Shewanella sp. ANA-3]
Length = 493
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 19/228 (8%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GE +A R L +++K V + + + P L + +SP+L G LS R L
Sbjct: 214 WAAGEGQAKRILTAFIKQK--VQDYKQDRDFPA--LDGTSVISPYLALGVLSPRQCIAAL 269
Query: 151 NKLYKRI--KKAPPPLSLHGQLLWREFF------YCAATRNPNFDRMLGNPICVQIPWDV 202
+ + P + +L+WREF+ + ++ NF+R + + W
Sbjct: 270 LGRFPDVIVDDTSPGRTWLNELIWREFYRHLLVAFPDLSKGHNFNRQADH-----VQWRN 324
Query: 203 NMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFD 262
N W +TG+P +DA M QL + GW+H+ R VA FLT+ L + W G + F
Sbjct: 325 NQAEFLAWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERYFR 383
Query: 263 ELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ L+D D + N G W W + C Q +F + P+ K DP+G FI
Sbjct: 384 QHLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPISQSEKFDPDGSFI 431
>gi|407781615|ref|ZP_11128833.1| deoxyribodipyrimidine photolyase family protein [Oceanibaculum
indicum P24]
gi|407207832|gb|EKE77763.1| deoxyribodipyrimidine photolyase family protein [Oceanibaculum
indicum P24]
Length = 497
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 125/303 (41%), Gaps = 35/303 (11%)
Query: 20 IEKNGGKTPLTYHQF-QSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEE 78
+E G+ Y F ++ +AK P AP T + A+ P D + +PT
Sbjct: 155 VENKSGEPFRVYSAFWRACLAKGKPDKPLPAPET---LVAASAPASDSIGDWKLLPTKPN 211
Query: 79 LGFDIEGLLPPTWKGGETEAMRRLERHLERKA--WVASFGRPKMTPQSLLASQTGLSPFL 136
E W GE A RL L+ + A RP + S L SP L
Sbjct: 212 WAKRFES----AWTPGENGAQERLTGFLDEAVNRYKAERDRPDIEATSRL------SPHL 261
Query: 137 RFGCLSTRLFYH---------DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFD 187
FG + R +H DLN+ ++ WREF + N
Sbjct: 262 HFGEIGPRQIWHATRAAMAAHDLNEASAE--------KFLSEVGWREFSHHLLYHNDALP 313
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
P PW N +AL W TG+P +DA M +L GW+H+ R VA FL +
Sbjct: 314 EHPLRPEFADFPWHENDKALTAWQRGLTGYPIVDAGMRELWATGWMHNRVRMIVASFLVK 373
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNG 306
DL + W+EG F + L+DAD + NA W W++ C + +F + PV G K DP G
Sbjct: 374 -DLLIPWQEGEAWFWDTLVDADLANNAASWQWVAGCGADAAPYFRIFNPVLQGEKFDPEG 432
Query: 307 DFI 309
++
Sbjct: 433 AYV 435
>gi|47528471|ref|YP_019820.1| deoxyribodipyrimidine photolyase [Bacillus anthracis str. 'Ames
Ancestor']
gi|47503619|gb|AAT32295.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. 'Ames Ancestor']
Length = 469
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 109/235 (46%), Gaps = 25/235 (10%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + + K S GR P S+LA P+L FG +S +
Sbjct: 186 MESIWEPTEEGAYKTWKEFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVK 239
Query: 145 LFYHDL-NK--------LYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
L YH L NK K++ S QL+WREF Y P N
Sbjct: 240 LIYHYLINKSTESQCSLFEKQVN------SFIRQLIWREFSYYLLYHYPFTAYKPLNKSF 293
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W TG+P+IDA M +L + G++H+ R AVA FL + L + W+
Sbjct: 294 EHFPWNNEEELLRVWQKGDTGYPFIDAGMRELWQTGFMHNRTRMAVASFLVK-HLLIPWQ 352
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 353 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 407
>gi|421138201|ref|ZP_15598271.1| DNA photolyase, FAD-binding protein [Pseudomonas fluorescens
BBc6R8]
gi|404510624|gb|EKA24524.1| DNA photolyase, FAD-binding protein [Pseudomonas fluorescens
BBc6R8]
Length = 481
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 125/285 (43%), Gaps = 24/285 (8%)
Query: 29 LTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLP 88
+ Y + + ++ + A+AP+T ++ P DH E + P+ L
Sbjct: 155 VCYSRLHGALPRLVATPKAQAPLT---LKSDEVP---DHVEGFATPS---------EALR 199
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
W GE EA RRL++ + A ++ + + P SQ LS +L G +S R H
Sbjct: 200 ALWPAGEAEARRRLDQFAD--AQISYYKDERDFPAKPGTSQ--LSAYLAAGVVSPRQCLH 255
Query: 149 D-LNKLYKRIKKAP-PPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNME 205
L + ++ +LLWREF+ P R P + W + E
Sbjct: 256 AALQSNQGEFESGDIGAITWINELLWREFYKHILVGYPRVSRHRAFRPETEAVAWRNSPE 315
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
L W A+TG P IDA M QL E GW+H+ R VA FLT+ +L + W EG + F L
Sbjct: 316 DLKAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTK-NLLIDWREGERFFMRHL 374
Query: 266 LDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P+ K D G FI
Sbjct: 375 IDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDGEGVFI 419
>gi|392532976|ref|ZP_10280113.1| deoxyribodipyrimidine photolyase [Pseudoalteromonas arctica A
37-1-2]
Length = 464
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFFYCAATRNPNFD 187
+GLSP+L G +ST+ ++ + Y I + +L+WREF+ P
Sbjct: 230 SGLSPYLALGIVSTKQLLINIQQRYPDILTTSKSKTFTWINELVWREFYRHLIAEFPKLS 289
Query: 188 RMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
R N + W + W +TGFP +DA M QL++ GW+H+ R VA FLT
Sbjct: 290 RGDNFNEKYNAVVWRKSENEFTAWCEGRTGFPLVDAAMLQLKQTGWMHNRLRMVVASFLT 349
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPN 305
+ L + W EG + F + L+D D + N G W W + + Q +F + P++ + DP
Sbjct: 350 KH-LLIDWREGERFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRVFNPIRQSERFDPT 408
Query: 306 GDFI 309
G FI
Sbjct: 409 GKFI 412
>gi|218904303|ref|YP_002452137.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
AH820]
gi|218535120|gb|ACK87518.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
AH820]
Length = 476
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 109/235 (46%), Gaps = 25/235 (10%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + + K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTWKEFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NK--------LYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
L YH L NK K++ S QL+WREF Y P N
Sbjct: 247 LIYHYLINKSTESQCSLFEKQVN------SFIRQLIWREFSYYLLYHYPFTAYKPLNKSF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W TG+P+IDA M +L + G++H+ R AVA FL + L + W+
Sbjct: 301 EHFPWNNEEELLRVWQKGDTGYPFIDAGMRELWQTGFMHNRTRMAVASFLVK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 360 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|410663651|ref|YP_006916022.1| deoxyribodipyrimidine photo-lyase [Simiduia agarivorans SA1 = DSM
21679]
gi|409026008|gb|AFU98292.1| deoxyribodipyrimidine photo-lyase [Simiduia agarivorans SA1 = DSM
21679]
Length = 437
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 70 KYGVPTLEELGFDIEGLLPPT---WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
K PT+ F + +P W GE+EA +RL R + + +G + P L
Sbjct: 151 KVNAPTISRDAFGLSEDVPAMAALWPAGESEAHKRLVRFTRER--LMQYGEQRDFPA--L 206
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
+GLSP+L G +S R H + P +L WR+F+ P
Sbjct: 207 EGTSGLSPYLAVGAISARQCAHAWLLASEGDWHHPRSDVWLSELGWRDFYQYIMWHFPRV 266
Query: 187 DRMLGNPICV---QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
R P Q+ W E W +TG P +DA M QL GW+H+ R VA
Sbjct: 267 SR--NQPFVEKTRQLAWRSADEDFLAWCQGRTGIPLVDAAMRQLHATGWMHNRLRMVVAM 324
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKA 302
FLT+ +L V W G F + L+D D++ N G W W S + +F + PV ++
Sbjct: 325 FLTK-NLLVDWRRGEAYFMQQLVDGDFAANNGGWQWSASTGTDAAPYFRVFNPVSQSQRF 383
Query: 303 DPNGDFI 309
DP G FI
Sbjct: 384 DPEGQFI 390
>gi|448321022|ref|ZP_21510503.1| deoxyribodipyrimidine photolyase [Natronococcus amylolyticus DSM
10524]
gi|445604422|gb|ELY58370.1| deoxyribodipyrimidine photolyase [Natronococcus amylolyticus DSM
10524]
Length = 472
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 126/298 (42%), Gaps = 23/298 (7%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRD-DHDEKYGVPTLEE 78
I N G + F + PA AP T L L D E +P+L E
Sbjct: 132 ISPNEGDHYSVFSYFWKKWRDREKADPAPAPTTDELA-----DLEDASESEANPIPSLSE 186
Query: 79 LGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
LGFD PP A RLE + + + P + S+ LS L++
Sbjct: 187 LGFDEPDADPPAVT--RDAARERLETFCSDA--IYRYADERDVPAAGTTSR--LSTHLKW 240
Query: 139 GCLSTRLFYHDLNKLYKRIKKAPPP------LSLHGQLLWREFFYCAATRNPNFDRMLGN 192
G + R Y + + ++ AP ++ QL +REF+ NP +
Sbjct: 241 GTIGPREVYVETERA---LEDAPDEDARESVVAFRRQLAFREFYVHLLAFNPETVTEDFS 297
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+ W + + LA W +TG+P +DA M QLR EGW+H+ R VA FLT+ DL V
Sbjct: 298 GYESDLEWRNDPDELAAWRAGETGYPIVDAGMRQLRSEGWVHNRVRMLVASFLTK-DLLV 356
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W EG + L D + S + W W S + Q +F + P K GR+ DP+ +I
Sbjct: 357 DWREGYDWYRHYLADHETSSDVAGWQWAASTGADAQPYFRVFNPTKQGREYDPDAAYI 414
>gi|448677847|ref|ZP_21689037.1| deoxyribodipyrimidine photolyase [Haloarcula argentinensis DSM
12282]
gi|445773522|gb|EMA24555.1| deoxyribodipyrimidine photolyase [Haloarcula argentinensis DSM
12282]
Length = 465
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 111/241 (46%), Gaps = 12/241 (4%)
Query: 73 VPTLEELGFDI-EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
+PTL +LGF+ E +P G +A L+ L+ V + + P S+
Sbjct: 175 IPTLADLGFEEPEATVP---AAGTDDARALLDDFLDEN--VYEYEERRDFPADECTSR-- 227
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
LS L+FG + R Y + + QL WREF+ +P+
Sbjct: 228 LSAHLKFGTIGIREVYDRTQDAKEGTGGDRRESVREFQSQLAWREFYTQVLFAHPHVVTS 287
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
I W+ + E L W + +TG+P +DA M QLREE ++H+ R VA FLT+ D
Sbjct: 288 NYKSYENPIEWENDEELLQTWKDGETGYPIVDAGMRQLREEAYMHNRVRMIVASFLTK-D 346
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
L + W G + F E L+D D + + G W W S + Q +F + P+ G DP+ ++
Sbjct: 347 LLIDWRHGYEWFREKLVDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGEDYDPDAEY 406
Query: 309 I 309
I
Sbjct: 407 I 407
>gi|49185961|ref|YP_029213.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. Sterne]
gi|65320437|ref|ZP_00393396.1| COG0415: Deoxyribodipyrimidine photolyase [Bacillus anthracis str.
A2012]
gi|165868433|ref|ZP_02213093.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. A0488]
gi|167631730|ref|ZP_02390057.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. A0442]
gi|167637299|ref|ZP_02395579.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. A0193]
gi|170684891|ref|ZP_02876116.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. A0465]
gi|177649852|ref|ZP_02932853.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. A0174]
gi|190564773|ref|ZP_03017694.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. Tsiankovskii-I]
gi|227814024|ref|YP_002814033.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. CDC 684]
gi|229603798|ref|YP_002867382.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. A0248]
gi|254685712|ref|ZP_05149571.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. CNEVA-9066]
gi|254723122|ref|ZP_05184910.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. A1055]
gi|254738183|ref|ZP_05195886.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. Western North America USA6153]
gi|254742647|ref|ZP_05200332.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. Kruger B]
gi|254752497|ref|ZP_05204533.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. Vollum]
gi|254761013|ref|ZP_05213037.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. Australia 94]
gi|270000553|ref|NP_845490.2| deoxyribodipyrimidine photolyase [Bacillus anthracis str. Ames]
gi|386736907|ref|YP_006210088.1| Deoxyribodipyrimidine photolyase [Bacillus anthracis str. H9401]
gi|421510721|ref|ZP_15957609.1| deoxyribodipyrimidine photolyase [Bacillus anthracis str. UR-1]
gi|421636758|ref|ZP_16077356.1| deoxyribodipyrimidine photolyase [Bacillus anthracis str. BF1]
gi|49179888|gb|AAT55264.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. Sterne]
gi|164715159|gb|EDR20676.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. A0488]
gi|167514806|gb|EDR90172.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. A0193]
gi|167532028|gb|EDR94664.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. A0442]
gi|170671151|gb|EDT21889.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. A0465]
gi|172083804|gb|EDT68863.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. A0174]
gi|190564090|gb|EDV18054.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. Tsiankovskii-I]
gi|227005678|gb|ACP15421.1| deoxyribodipyrimidine photo-lyase [Bacillus anthracis str. CDC 684]
gi|229268206|gb|ACQ49843.1| deoxyribodipyrimidine photolyase family protein [Bacillus anthracis
str. A0248]
gi|269850227|gb|AAP26976.2| deoxyribodipyrimidine photo-lyase [Bacillus anthracis str. Ames]
gi|384386759|gb|AFH84420.1| Deoxyribodipyrimidine photolyase [Bacillus anthracis str. H9401]
gi|401819244|gb|EJT18426.1| deoxyribodipyrimidine photolyase [Bacillus anthracis str. UR-1]
gi|403395554|gb|EJY92792.1| deoxyribodipyrimidine photolyase [Bacillus anthracis str. BF1]
Length = 476
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 109/235 (46%), Gaps = 25/235 (10%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + + K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTWKEFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NK--------LYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
L YH L NK K++ S QL+WREF Y P N
Sbjct: 247 LIYHYLINKSTESQCSLFEKQVN------SFIRQLIWREFSYYLLYHYPFTAYKPLNKSF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W TG+P+IDA M +L + G++H+ R AVA FL + L + W+
Sbjct: 301 EHFPWNNEEELLRVWQKGDTGYPFIDAGMRELWQTGFMHNRTRMAVASFLVK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 360 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|209524800|ref|ZP_03273346.1| cryptochrome, DASH family [Arthrospira maxima CS-328]
gi|376007766|ref|ZP_09784952.1| Cryptochrome DASH [Arthrospira sp. PCC 8005]
gi|423063001|ref|ZP_17051791.1| cryptochrome DASH family [Arthrospira platensis C1]
gi|209494679|gb|EDZ94988.1| cryptochrome, DASH family [Arthrospira maxima CS-328]
gi|375323871|emb|CCE20705.1| Cryptochrome DASH [Arthrospira sp. PCC 8005]
gi|406715580|gb|EKD10734.1| cryptochrome DASH family [Arthrospira platensis C1]
Length = 486
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 117/244 (47%), Gaps = 13/244 (5%)
Query: 73 VPTLEELG-----FDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+PTL ELG FD +L + GGET + RL + ++ + ++ K T +L
Sbjct: 191 IPTLAELGITKLPFDSRAVL--DFVGGETAGLTRLNDYFWQRDCLKNY---KQTRNGMLG 245
Query: 128 SQ--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
S + SP+L GCLS R Y + ++ K L +LLWR++F ++
Sbjct: 246 SDYSSKFSPWLANGCLSPRWIYQQVCDYEQQRVKNDSTYWLVFELLWRDYFRFICLKHGR 305
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
V+IPW N + W + TGFP +DA M +L G++ + R VA FL
Sbjct: 306 KVFYKSGLQGVKIPWGENWQQFQSWCDGLTGFPLVDANMRELAATGFMSNRGRQNVASFL 365
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
T+ +L ++W+ G + F+ LL+D D N G W + + + F + K + DP
Sbjct: 366 TK-NLGINWQMGAEWFESLLIDYDVCSNWGNWNYTAGVGNDGRGFRYFNIAKQSQDYDPM 424
Query: 306 GDFI 309
GD++
Sbjct: 425 GDYV 428
>gi|407278627|ref|ZP_11107097.1| deoxyribodipyrimidine photo-lyase [Rhodococcus sp. P14]
Length = 454
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 112/233 (48%), Gaps = 18/233 (7%)
Query: 82 DIEG-LLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGC 140
D++G LPP GE A+ R H R + + + P L + LSP+L+FGC
Sbjct: 184 DLDGATLPPA---GEAAALHRW--HEFRDDDLPHYDTDRDRPD--LDRTSRLSPYLKFGC 236
Query: 141 LSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW 200
+ R HD+ R +++ L +L WR+F+ P+ R N I +
Sbjct: 237 IHPRTLLHDV-----RSERSAGANRLRSELAWRDFYADVLYHRPDTARRNYNRRFDDIAY 291
Query: 201 DVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
D +A A W +TGFP +DA M QL EGW+H+ R VA FL + DL + W G
Sbjct: 292 DRGPDAERNFAAWKQGRTGFPIVDAGMRQLLAEGWMHNRLRMIVASFLAK-DLHLPWWWG 350
Query: 258 MKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
+ F + L+D D + N W W + S + +F + P+ G K DP G+++
Sbjct: 351 ARHFMDRLVDGDLASNQHGWQWTAGSGTDAAPYFRVFNPLTQGEKFDPTGEYV 403
>gi|424745709|ref|ZP_18173970.1| FAD binding domain of DNA photolyase [Acinetobacter baumannii
WC-141]
gi|422941898|gb|EKU36961.1| FAD binding domain of DNA photolyase [Acinetobacter baumannii
WC-141]
Length = 373
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 123/276 (44%), Gaps = 38/276 (13%)
Query: 53 PLLVRQATTPLRDDHDEKYGVPTLEELGFD--IEGLLPPTWKGGETEAMRRL----ERHL 106
P+ +Q P D + + G+ +E FD + W GE A+ +L E HL
Sbjct: 67 PIPGKQTANPESDSNIKSLGLEDIEAF-FDSSVSKEQQDLWPTGEDYALEQLDLFIEDHL 125
Query: 107 ERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL 166
F K T Q LSP+L G LS R L L+ R + L+
Sbjct: 126 SHYKSERDFSNVKGTSQ--------LSPYLNLGILSIR---QCLQALF-RAEHGNFHLAN 173
Query: 167 HGQ------LLWREFF------YCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQ 214
GQ LLWREF+ + +++ F + + N I W+ N L W Q
Sbjct: 174 EGQQTWLDELLWREFYQHILFDFPKVSKHYPFKQNMQN-----IKWENNQAHLLAWQTGQ 228
Query: 215 TGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNA 274
TG P IDA M QL++ GW+H+ R A FL + +L + W G + F + L+D D + N
Sbjct: 229 TGIPIIDAGMRQLQKTGWMHNRVRMITAMFLCK-NLLIDWRIGEQWFMQHLIDGDLAANN 287
Query: 275 GMWMWL-SCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G W W S + +F + P+ +K DPNGD+I
Sbjct: 288 GGWQWCASTGTDAVPYFRIFNPIAQSKKFDPNGDYI 323
>gi|428203429|ref|YP_007082018.1| DASH family cryptochrome [Pleurocapsa sp. PCC 7327]
gi|427980861|gb|AFY78461.1| cryptochrome, DASH family [Pleurocapsa sp. PCC 7327]
Length = 488
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 8/236 (3%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA--SQTGLS 133
+EEL FD +L ++GGET+ + RL + K + ++ K T +L + S
Sbjct: 197 IEELIFDERAVL--KFQGGETKGLVRLHNYFWEKDCLRTY---KETRNGMLGLDYSSKFS 251
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
P+L GCLS RL Y + K K L +L+WR+FF ++ N
Sbjct: 252 PWLALGCLSPRLIYEQVQKYESERIKNDSTYWLVFELMWRDFFRFICAKHGNRIFRKSGL 311
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+ IPW + + W +TG+P +DA M +L G++ + R VA FLT+ +L ++
Sbjct: 312 QGLDIPWKEDWKRFQLWQEGKTGYPLVDANMRELAATGFMSNRGRQNVASFLTK-NLGIN 370
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W+ G + F+ LL+D D N G W + + + F + +K + D GD++
Sbjct: 371 WQMGAEWFESLLIDYDVCSNYGNWNYTAGVGNDARGFRYFNVLKQSKDYDSKGDYL 426
>gi|441518362|ref|ZP_21000085.1| deoxyribodipyrimidine photo-lyase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441454765|dbj|GAC58046.1| deoxyribodipyrimidine photo-lyase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 470
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 88/182 (48%), Gaps = 10/182 (5%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
LSP+L+FGCL R DL R + P S +L WR+F+ P R
Sbjct: 238 LSPYLKFGCLHPRTVLADL-----RGRTDPGAESWRSELAWRDFYADVLHHRPETARGNA 292
Query: 192 NPICVQIPWDVN---MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+ + +D EA A W + +TG+P +DA M QLR +GW+H+ R A FLT+
Sbjct: 293 DTKFDALEYDTGPAADEAFAAWCSGRTGYPIVDAGMRQLRAQGWMHNRVRMITASFLTK- 351
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G + F L+D D N W W + S + +F + P G + DP GD
Sbjct: 352 DLHLPWWRGARYFMTQLVDGDLPSNQHGWQWTAGSGTDAAPYFRVFNPTAQGERFDPEGD 411
Query: 308 FI 309
+I
Sbjct: 412 YI 413
>gi|409728146|ref|ZP_11271017.1| deoxyribodipyrimidine photolyase [Halococcus hamelinensis 100A6]
gi|448723116|ref|ZP_21705641.1| deoxyribodipyrimidine photolyase [Halococcus hamelinensis 100A6]
gi|445788071|gb|EMA38793.1| deoxyribodipyrimidine photolyase [Halococcus hamelinensis 100A6]
Length = 466
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 13/242 (5%)
Query: 73 VPTLEELGFDI-EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
+PT ++LGFD + LP + G A RL+ E A + + + P A +
Sbjct: 173 LPTSDDLGFDEPDATLP---EAGTEAARDRLDSFCE--AAIGEYETEREYPAR--AGTSR 225
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNFDR 188
LS L++G + R + + R S+ +L WREF+ NP
Sbjct: 226 LSQDLKYGTIGIREVSERVAEAADRADGDDVRESIETYREELAWREFYTQVLRYNPEVVT 285
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+ I W + + L W + +TG+P +DA M QL EE +IH+ R VA FLT+
Sbjct: 286 ENYSSYENPIEWRESDDDLDAWKDGETGYPIVDAGMRQLHEEAYIHNRVRMIVAAFLTK- 344
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G F ELL+D D + + G W W S + Q +F + P+ G + DP+ +
Sbjct: 345 DLLLDWRAGYDHFRELLVDHDTANDNGGWQWAASTGTDAQPYFRVFNPMTQGERYDPDAE 404
Query: 308 FI 309
+I
Sbjct: 405 YI 406
>gi|414596902|ref|ZP_11446474.1| Deoxyribodipyrimidine photolyase [Leuconostoc citreum LBAE E16]
gi|390482266|emb|CCF28535.1| Deoxyribodipyrimidine photolyase [Leuconostoc citreum LBAE E16]
Length = 478
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 40/280 (14%)
Query: 44 PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPP----------TWKG 93
P P + VT L +Q + +E L EGLL +
Sbjct: 162 PKPVKVSVTSLQEKQ--------------MANIEPLHLHQEGLLTSLINEKHDKQLVGQV 207
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE +A++ L+ ++ + +A + + P L + + LS +LR G ++ R +
Sbjct: 208 GEAKALQTLKDFIQ--SHLAEYDTQRDLP--FLDATSHLSRYLRTGEIAIR-------TI 256
Query: 154 YKRIKKAPPP---LSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
Y+ + P + +L WR+++ NP + P +I W N W
Sbjct: 257 YQAVINEPESEGQQTFIKELAWRDYYNMIYAMNPQQNTQSLRPEFQKIAWRNNHNDFLLW 316
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
QTGFP +DA M QL + GW+H+ R VA FLT+ DL + W G + F + LLD D
Sbjct: 317 QTGQTGFPIVDAAMRQLNQTGWMHNRLRMIVASFLTK-DLLIDWRWGEQYFHDQLLDYDP 375
Query: 271 SVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G W W S + +F + P + +K DP+G FI
Sbjct: 376 ASNIGGWQWAASTGTDSVPYFRIFNPTRQSQKFDPDGQFI 415
>gi|196037804|ref|ZP_03105114.1| deoxyribodipyrimidine photo-lyase [Bacillus cereus NVH0597-99]
gi|196031074|gb|EDX69671.1| deoxyribodipyrimidine photo-lyase [Bacillus cereus NVH0597-99]
Length = 476
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 109/235 (46%), Gaps = 25/235 (10%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + + K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTWKEFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NK--------LYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
L YH L NK K++ S QL+WREF Y P N
Sbjct: 247 LIYHYLINKSTESQCSLFEKQVN------SFIRQLIWREFSYYLLYHYPFTAYKPLNKSF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W TG+P+IDA M +L + G++H+ R AVA FL + L + W+
Sbjct: 301 EHFPWNNEEELLRVWQKGDTGYPFIDAGMRELWQTGFMHNRTRMAVASFLVK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 360 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|196032015|ref|ZP_03099429.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus W]
gi|228928215|ref|ZP_04091256.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228946776|ref|ZP_04109081.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229122697|ref|ZP_04251907.1| Deoxyribodipyrimidine photolyase [Bacillus cereus 95/8201]
gi|195994766|gb|EDX58720.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus W]
gi|228660748|gb|EEL16378.1| Deoxyribodipyrimidine photolyase [Bacillus cereus 95/8201]
gi|228812900|gb|EEM59216.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228831262|gb|EEM76858.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 476
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 109/235 (46%), Gaps = 25/235 (10%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + + K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTWKEFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NK--------LYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
L YH L NK K++ S QL+WREF Y P N
Sbjct: 247 LIYHYLINKSTESQCSLFEKQVN------SFIRQLIWREFSYYLLYHYPFTAYKPLNKSF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W TG+P+IDA M +L + G++H+ R AVA FL + L + W+
Sbjct: 301 EHFPWNNEEELLRVWQKGDTGYPFIDAGMRELWQTGFMHNRTRMAVASFLVK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 360 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|167816639|ref|ZP_02448319.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 91]
Length = 291
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 2 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 55
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 56 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLR 115
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 116 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 174
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 175 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 232
>gi|49478047|ref|YP_037258.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49329603|gb|AAT60249.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 476
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 109/235 (46%), Gaps = 25/235 (10%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + + K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTWKEFFSSKLASYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDL-NK--------LYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
L YH L NK K++ S QL+WREF Y P N
Sbjct: 247 LIYHYLINKSTESQCSLFEKQVN------SFIRQLIWREFSYYLLYHYPFTAYKPLNKSF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W TG+P+IDA M +L + G++H+ R AVA FL + L + W+
Sbjct: 301 EHFPWNNEEELLRVWQKGDTGYPFIDAGMRELWQTGFMHNRTRMAVASFLVK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 360 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|146303224|ref|YP_001190540.1| deoxyribodipyrimidine photo-lyase type I [Metallosphaera sedula DSM
5348]
gi|145701474|gb|ABP94616.1| deoxyribodipyrimidine photo-lyase type I [Metallosphaera sedula DSM
5348]
Length = 435
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 114/240 (47%), Gaps = 32/240 (13%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+P E L ++E +P GG E ++RLER + +F + T T L
Sbjct: 168 LPGTEVLKLEVERGIP----GGRQEGLKRLERARNLNYSMRNFPGVEGT--------TKL 215
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGN 192
SP+++FG +S R Y +N+ +R QL WR+F+ A NP+ + G+
Sbjct: 216 SPYIKFGVVSPREVYWAVNEEIRR------------QLYWRDFYTLLAYYNPH---VFGH 260
Query: 193 PICVQ---IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
+ IPW N L W +TG+P +DA M +L E G++H+ R A FL +
Sbjct: 261 SYKREYDCIPWKWNEAHLEAWKQGKTGYPIVDAGMRELNETGFMHNRTRMITASFLVKV- 319
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L V W G + F L+D D SVN G W W++ S+ F + P RK DP+ +I
Sbjct: 320 LHVDWRIGERYFATKLVDYDPSVNNGNWQWVA-STGADYMFRVFNPWLQQRKFDPDAVYI 378
>gi|167919769|ref|ZP_02506860.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei BCC215]
Length = 299
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 10 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 63
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 64 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLR 123
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 124 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 182
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 183 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 240
>gi|421879677|ref|ZP_16311138.1| PhrB protein [Leuconostoc citreum LBAE C11]
gi|390446444|emb|CCF27258.1| PhrB protein [Leuconostoc citreum LBAE C11]
Length = 478
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 40/280 (14%)
Query: 44 PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPP----------TWKG 93
P P + VT L +Q + +E L EGLL +
Sbjct: 162 PKPVKVSVTSLQEKQ--------------MANIEPLHLHQEGLLTSLINEKHDKQLVGQV 207
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE +A++ L+ ++ + +A + + P L + + LS +LR G ++ R +
Sbjct: 208 GEAKALQTLKDFIQ--SHLAEYDTQRDLP--FLDATSHLSRYLRTGEIAIR-------TI 256
Query: 154 YKRIKKAPPP---LSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
Y+ + P + +L WR+++ NP + P +I W N W
Sbjct: 257 YQAVINEPESEGQQTFIKELAWRDYYNMIYAMNPQQNTQSLRPEFQKIAWRNNHNDFLLW 316
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
QTGFP +DA M QL + GW+H+ R VA FLT+ DL + W G + F + LLD D
Sbjct: 317 QTGQTGFPIVDAAMRQLNQTGWMHNRLRMIVASFLTK-DLLIDWRWGEQYFHDQLLDYDP 375
Query: 271 SVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G W W S + +F + P + +K DP+G FI
Sbjct: 376 ASNIGGWQWAASTGTDSVPYFRIFNPTRQSQKFDPDGQFI 415
>gi|167903517|ref|ZP_02490722.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei NCTC
13177]
Length = 302
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLS 133
LE G D G L W+ GE A RRL ++ + + A RP +AS + LS
Sbjct: 13 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLS 66
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGN 192
P++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 67 PYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLR 126
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 127 HTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLI 185
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 186 DWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 243
>gi|242812722|ref|XP_002486016.1| DNA photolyase, putative [Talaromyces stipitatus ATCC 10500]
gi|218714355|gb|EED13778.1| DNA photolyase, putative [Talaromyces stipitatus ATCC 10500]
Length = 356
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 166 LHGQLLWREFFYCA-ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIM 224
L GQLL+ E F+ A A + GN I N+ L + ++ F
Sbjct: 180 LLGQLLFGEMFFSAQAALGHTSSQTFGNKIAHSFHGGCNL--LIQSHQTESSFEITRMPS 237
Query: 225 TQLR-EEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS 283
Q + + G+++ + CFLTRG +VSWE+G+++F E L+D + + N G WMWLSC+
Sbjct: 238 IQKKPQHGFVNGV------CFLTRGGCYVSWEQGVEVFQEWLIDHEEASNVGNWMWLSCT 291
Query: 284 SFFQQFFHCYCPVKFGRKADPNGDFI 309
+FF Q++ CY P+ FGR+ DPNGDF+
Sbjct: 292 AFFSQYYRCYSPIAFGRRWDPNGDFV 317
>gi|37520404|ref|NP_923781.1| cryptochrome [Gloeobacter violaceus PCC 7421]
gi|81834455|sp|Q7NMD1.1|CRYD_GLOVI RecName: Full=Cryptochrome DASH
gi|35211397|dbj|BAC88776.1| phrA [Gloeobacter violaceus PCC 7421]
Length = 500
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 116/244 (47%), Gaps = 13/244 (5%)
Query: 73 VPTLEELGF-----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+P L +LG D +L +KGGET + RLE + +K+ + S+ K T +L
Sbjct: 189 IPQLADLGLESPVTDERAVL--QFKGGETSGLARLEEYFWQKSLLKSY---KQTRNGMLG 243
Query: 128 SQ--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ + S +L GCLS R + + + K L +LLWR++F A ++ +
Sbjct: 244 ADYSSKFSAWLALGCLSARYIHEQVQTYETKRIKNDSTYWLIFELLWRDYFRFIAAKHGD 303
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
+ IPW + E W QTGFP +DA M +L G++ + R VA FL
Sbjct: 304 RLFYTAGLRGLDIPWKEDWERFELWRTGQTGFPLVDANMRELAATGFMSNRGRQNVASFL 363
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
T+ +L + W G + F+ L+D D + N G W + + + F + +K R DP+
Sbjct: 364 TK-NLGIHWHMGAEWFESRLIDYDVASNWGNWNYTAGVGNDARGFRFFNILKQARDYDPD 422
Query: 306 GDFI 309
G ++
Sbjct: 423 GAYV 426
>gi|414162215|ref|ZP_11418462.1| hypothetical protein HMPREF9697_00363 [Afipia felis ATCC 53690]
gi|410879995|gb|EKS27835.1| hypothetical protein HMPREF9697_00363 [Afipia felis ATCC 53690]
Length = 485
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 136/315 (43%), Gaps = 23/315 (7%)
Query: 1 MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT 60
+ + I L+ P S R E NG + + ++ + ++ D P P A VR+
Sbjct: 128 VETHISPSDLLASPPSIRNKEGNGLRVFTPF--WKRVRSQGDPPRPLPA------VRKLP 179
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
P+ E LE D G L TW GE+ A RRL L+ + GR
Sbjct: 180 PPVASVKSENLKDWKLEPTHPDWAGGLRETWTPGESGAHRRLNDFLDEAIKGYAIGRD-- 237
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH-----GQLLWREF 175
P AS LSP LRFG +S R +H + + P LS +L WREF
Sbjct: 238 FPGRDHASH--LSPHLRFGEISPRQVFH----AARFAAEQHPALSRDVEKFLSELGWREF 291
Query: 176 FYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHH 235
+P+ R PW + +AL W +TG+P +DA M +L G + +
Sbjct: 292 CRHLLFDHPDLHRRNLQSSFDDFPWRRDAKALRAWQQGRTGYPIVDAGMRELWHTGTMQN 351
Query: 236 LARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYC 294
R A FL + L + W EG F + L+DAD N G W W++ C + +F +
Sbjct: 352 RVRMVTASFLVK-HLLLDWREGEAWFWDTLVDADPGSNPGNWQWVAGCGADAAPYFRIFN 410
Query: 295 PVKFGRKADPNGDFI 309
P+ G K DP+G ++
Sbjct: 411 PILQGEKFDPDGAYV 425
>gi|229156755|ref|ZP_04284842.1| Deoxyribodipyrimidine photolyase [Bacillus cereus ATCC 4342]
gi|228626675|gb|EEK83415.1| Deoxyribodipyrimidine photolyase [Bacillus cereus ATCC 4342]
Length = 476
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 115/235 (48%), Gaps = 21/235 (8%)
Query: 83 IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGC 140
IE + PT +G A + ++ K S GR P S+LA P+L FG
Sbjct: 193 IESIWNPTEEG----AYKTCKKFFFSKLASYSEGRDFPNENAHSMLA------PYLSFGQ 242
Query: 141 LSTRLFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
+S R YH L NK +R +K S QL+WREF Y P N
Sbjct: 243 ISVRWMYHYLINKSTERQCSLFEKQVN--SFIRQLIWREFSYYLLYHYPFTVYKPLNKNF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+
Sbjct: 301 EHFPWNKEEELLTVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 360 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 414
>gi|170727122|ref|YP_001761148.1| deoxyribodipyrimidine photo-lyase [Shewanella woodyi ATCC 51908]
gi|169812469|gb|ACA87053.1| Deoxyribodipyrimidine photo-lyase [Shewanella woodyi ATCC 51908]
Length = 469
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 88/188 (46%), Gaps = 5/188 (2%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRN 183
+ +GLSP+L G LS R Y L Y ++ P +L+WR+F+
Sbjct: 232 IKGTSGLSPYLAIGALSPRTLYQQLLARYPQLIEDDNHPAFCWLNELIWRDFYKHLLFHY 291
Query: 184 PNFDRMLGN-PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
P + + W W+ +TG+P +DA M QL GW+H+ R VA
Sbjct: 292 PRLSKQTSFLEKYAKTQWPGTQAEFDAWSKGETGYPLVDAAMRQLVRTGWMHNRLRMVVA 351
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRK 301
FLT+ L V W +G + F L+D D S N G W W + + Q +F + P+ +K
Sbjct: 352 SFLTK-HLLVDWRQGEQFFMSHLIDGDHSANNGGWQWAASTGCDAQPYFRVFNPILQSQK 410
Query: 302 ADPNGDFI 309
DPNGDFI
Sbjct: 411 FDPNGDFI 418
>gi|308049190|ref|YP_003912756.1| deoxyribodipyrimidine photo-lyase [Ferrimonas balearica DSM 9799]
gi|307631380|gb|ADN75682.1| Deoxyribodipyrimidine photo-lyase [Ferrimonas balearica DSM 9799]
Length = 456
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 10/220 (4%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GE A R L R +++ ++++ + P A + LSP+ G LS R H L
Sbjct: 190 WPAGEQAAARTLARFCQQR--LSAYHDDRDWPAK--AGTSALSPYFAAGVLSPRQAAHAL 245
Query: 151 NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
++ S +LLWREF+ + R + W+ N E L +W
Sbjct: 246 SQQ----ADGEGAQSWLNELLWREFYRYLLYHHARLSRHDALFPAKEARWEANDEWLRRW 301
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
+TGFP +DA M QL GW+H+ R A FL + DL + W G F + L+D D
Sbjct: 302 QQGRTGFPLVDAGMRQLNATGWMHNRVRMLCASFLVK-DLHIDWRLGEAYFMQQLVDGDL 360
Query: 271 SVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G W W + C + +F + P + + DP+GD+I
Sbjct: 361 ASNNGGWQWAAGCGADAAPYFRSFSPYRQSERFDPDGDYI 400
>gi|363581247|ref|ZP_09314057.1| cryptochrome-like DNA photolyase [Flavobacteriaceae bacterium HQM9]
Length = 432
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 9/224 (4%)
Query: 63 LRDDHDEKYGVPTLEELGFDIEGLLPPT---WKGGETEAMRRLERHLERKAWVASFGRPK 119
L++ + K + L +LGF T +KGGE A+ RL + +A + K
Sbjct: 177 LQNPIENKTKILNLTDLGFTYFETPSHTAFPFKGGENSALERLNSYFWETKKLAYY---K 233
Query: 120 MTPQSLLASQ--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFY 177
T LL + + S +L G +S + Y + K K IKK L +LLWR++F
Sbjct: 234 KTRNGLLGTDYSSKFSAWLANGSISAKTIYIQVKKFEKEIKKNDSTYWLIFELLWRDYFK 293
Query: 178 CAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLA 237
+ ++ N +G + W +ME + W + TG P++DA M +L++ GW+ +
Sbjct: 294 YISLKHGNSIFKIGGILNKNYNWSTDMEVVQHWIHGNTGKPFVDANMLELQQTGWMSNRG 353
Query: 238 RHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS 281
R V +L + DL V W G F+ +L+D D N G WM+++
Sbjct: 354 RQNVGSYLAK-DLLVDWRIGAAYFESMLIDYDVHSNYGNWMYVA 396
>gi|119509710|ref|ZP_01628855.1| deoxyribopyrimidine photolyase [Nodularia spumigena CCY9414]
gi|119465576|gb|EAW46468.1| deoxyribopyrimidine photolyase [Nodularia spumigena CCY9414]
Length = 482
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 125/294 (42%), Gaps = 16/294 (5%)
Query: 22 KNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGV---PTLEE 78
+ G K+P T + S K S P V L T + ++ GV PT +
Sbjct: 140 RTGTKSPYTVY---SPFWKNWSSKPKAKSVETLQNAAGLTEAEQEIAKQAGVIPLPTARD 196
Query: 79 LGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
LGF +G L + GE A RL+ + + + + P + + LS L+F
Sbjct: 197 LGFIWDGEL--SISPGEAAAQERLQEFTDSA--ITEYQEQRNLPG--VDGTSRLSAALKF 250
Query: 139 GCLSTRLFYH---DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
G + R + + + + + A + +L WREF+ A P
Sbjct: 251 GVIGIRQVWEATLEAQEFSRSEETAASIRTWQQELAWREFYQHAMYNFPELAEGAYRDTF 310
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW N E W +TG+P +DA M QL E GW+H+ R VA FLT+ DL ++ +
Sbjct: 311 KNFPWQNNDEYFQAWCEGRTGYPIVDAAMRQLNEMGWMHNRCRMIVASFLTK-DLMINPQ 369
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G K F + L+D D S N G W W + S + + P +K D G++I
Sbjct: 370 LGEKYFMQKLIDGDLSANNGGWQWSTSSGMDPKPLRIFNPASQAQKFDGEGEYI 423
>gi|348503387|ref|XP_003439246.1| PREDICTED: cryptochrome DASH-like [Oreochromis niloticus]
Length = 521
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 20/291 (6%)
Query: 26 KTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVR-QATTPLRDDHDEKYGVPTLEELGFDIE 84
+ P Y QF+ V +E V P+ + PL +E +PT E+L E
Sbjct: 154 RLPDVYTQFRKAVE-------SEGRVRPVFSTPEKLNPLPPGLEEG-AIPTAEDLQ-QTE 204
Query: 85 GLLPPTWK----GGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRF 138
+ P GGE++A+ RL+ + VA++ K T L+ T SP+L
Sbjct: 205 PVTDPRSAFPCGGGESQALARLKHYFWDTDAVATY---KETRNGLIGVDYSTKFSPWLAM 261
Query: 139 GCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQI 198
GC+S R YH + + K + +LLWR++F + + N + +
Sbjct: 262 GCISPRYIYHQIKQYEKERTANQSTYWVIFELLWRDYFRFVSVKYGNRIFQVKGLQDKSV 321
Query: 199 PWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGM 258
PW +M+ W +TG P++DA M +L G++ + R VA FLT+ DL + W G
Sbjct: 322 PWKKDMKLFDAWKEGRTGVPFVDANMRELAATGFMSNRGRQNVASFLTK-DLGLDWRMGA 380
Query: 259 KIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ F+ LL+D D N G W++ + + + +K G D NGD++
Sbjct: 381 EWFESLLIDHDVCSNYGNWLYSAGIGNDPRENRKFNMIKQGLDYDNNGDYV 431
>gi|429862926|gb|ELA37522.1| deoxyribodipyrimidine photo-lyase [Colletotrichum gloeosporioides
Nara gc5]
Length = 594
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 106/231 (45%), Gaps = 16/231 (6%)
Query: 85 GLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTR 144
PP GE EA RLE+ E K V + + P A + LS L G +S+R
Sbjct: 315 AFFPP----GEHEARSRLEKFCEEK--VGQYHNKRNIPYD--AGTSTLSVHLASGTISSR 366
Query: 145 L---FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG--NPICVQIP 199
+ D NK K ++ WR+F+ P F M P I
Sbjct: 367 TCVRYARDRNKTKKLDAGNEGIRVWISEVAWRDFYKHVLVNWP-FVCMNKPFKPEYANIE 425
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W +M+ W + +TGFP +DA M Q+ E GW+H+ R VACFL + DL + W G +
Sbjct: 426 WSYDMDDFKAWCDGKTGFPIVDAAMRQMHEMGWMHNRCRMIVACFLAK-DLLIDWRMGER 484
Query: 260 IFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F E L+D D++ N G W + S Q +F + P+ K DPNGD+I
Sbjct: 485 HFMENLIDGDFASNNGGWGFSASVGVDPQPYFRIFNPLLQSEKFDPNGDYI 535
>gi|55377670|ref|YP_135520.1| deoxyribodipyrimidine photolyase [Haloarcula marismortui ATCC
43049]
gi|55230395|gb|AAV45814.1| deoxyribodipyrimidine photolyase [Haloarcula marismortui ATCC
43049]
Length = 465
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 14/243 (5%)
Query: 72 GVPTLEELGFDI-EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+PTL +LGF+ E +P G EA L+ L+ V + + P S+
Sbjct: 174 ALPTLADLGFEEPEADVP---AAGTEEARALLDDFLDEN--VYEYEERRDFPADECTSR- 227
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFD 187
LS L+FG + R Y D + K S+ QL WREF+ +P+
Sbjct: 228 -LSAHLKFGTIGIREVY-DRTQAAKEGTGGDRRDSVREFQSQLAWREFYTQVLFAHPHVV 285
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
I W+ + E L W + TG+P +DA M QLR+E ++H+ R VA FLT+
Sbjct: 286 SSNYKSYENPIEWENDEELLQAWKDGDTGYPIVDAGMRQLRDEAYMHNRVRMIVASFLTK 345
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNG 306
DL + W G + F E L+D D + + G W W S + Q +F + P+ G DPN
Sbjct: 346 -DLLIDWRHGYEWFREKLVDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGEDYDPNA 404
Query: 307 DFI 309
++I
Sbjct: 405 EYI 407
>gi|77362362|ref|YP_341936.1| deoxyribodipyrimidine photolyase [Pseudoalteromonas haloplanktis
TAC125]
gi|76877273|emb|CAI89490.1| putative deoxyribodipyrimidine photolyase [Pseudoalteromonas
haloplanktis TAC125]
Length = 468
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 5/188 (2%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFFYCAATRN 183
+ +GLSP+L G +ST+ ++ + Y I + +L+WREF+ +
Sbjct: 230 IKGTSGLSPYLALGIISTKQLLINIQQRYPDILSTSKSKTFTWVNELIWREFYRHLIAQF 289
Query: 184 PNFDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
P R N + W + + W +TG+P +DA M QL + GW+H+ R VA
Sbjct: 290 PKLSRGDNFNEKYNAVVWRSSDDDFKAWCEGRTGYPLVDAAMRQLLQTGWMHNRLRMVVA 349
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRK 301
FLT+ L + W +G + F + L+D D + N G W W + + Q +F + P++ +
Sbjct: 350 SFLTK-HLLIDWRKGERFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRVFNPIRQSER 408
Query: 302 ADPNGDFI 309
DPNG+FI
Sbjct: 409 FDPNGEFI 416
>gi|34557872|ref|NP_907687.1| deoxyribodipyrimidine photo-lyase [Wolinella succinogenes DSM 1740]
gi|34483590|emb|CAE10587.1| DEOXYRIBODIPYRIMIDINE PHOTOLYASE DNA PHOTOLYASEPHOTOREACTIVATING
ENZYME [Wolinella succinogenes]
Length = 447
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 121/241 (50%), Gaps = 24/241 (9%)
Query: 74 PTLEELGFDIEGLLPPTWKGGETEAMRRL-ERHLERKAWVASFGRPKMTPQSLLASQT-G 131
P+LE +GF LL E+++ L ++ LE + + R + SL A T G
Sbjct: 173 PSLESMGFSPLPLL---------ESLKILPQKRLEE--FSSKITRYALDRDSLEAEATSG 221
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKR--IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
LS FLRFG L R L K+++ IK AP + Q+LWREF+ P+ +R
Sbjct: 222 LSLFLRFGTLGVREVIRRL-KVWQEEGIKVAP----FYRQILWREFYAMLLYHFPHSERE 276
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
P+ Q+ W + E L +W + G P +DA M +L G++H+ AR A FLT+ +
Sbjct: 277 DFKPM--QMRWSESQERLERWQKGECGVPLVDAGMRELNHTGFMHNRARMVCASFLTK-N 333
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDF 308
L + W G + F LLD D + NAG W W + S + Q FF + P K DP G++
Sbjct: 334 LHLHWSWGERYFASKLLDYDVAQNAGNWQWCAGSGADAQPFFRIFNPYTQSLKFDPKGEY 393
Query: 309 I 309
+
Sbjct: 394 V 394
>gi|428306556|ref|YP_007143381.1| deoxyribodipyrimidine photo-lyase type I [Crinalium epipsammum PCC
9333]
gi|428248091|gb|AFZ13871.1| deoxyribodipyrimidine photo-lyase type I [Crinalium epipsammum PCC
9333]
Length = 474
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 19/273 (6%)
Query: 47 AEAPVTPLLVRQATTPLRDDHDE---KYGV---PTLEELGF--DIEGLLPPTWKGGETEA 98
++A TP Q L D E + GV PT LGF + ++ P GE A
Sbjct: 158 SKAKSTPAPALQNAIRLTDTEKEAARQAGVVELPTASYLGFIWNNNLVISP----GEAAA 213
Query: 99 MRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK 158
+L +R + + + P SQ LS L+FG + R + + LY+
Sbjct: 214 QAKLATFCDRT--IDQYQEQRNFPAVDGTSQ--LSAALKFGAIGIRTVWDAIATLYQNSP 269
Query: 159 KAPPP--LSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTG 216
++ + +L WREF+ A P+ + PW+ N E W +TG
Sbjct: 270 ESAQASIQTWQQELAWREFYQHAIYNFPDLAKGAYREAFKDFPWNDNSEHFQAWCEGKTG 329
Query: 217 FPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGM 276
+P +DA M Q+ GW+H+ R VA FLT+ DL ++W+ G K F + L+D D S N G
Sbjct: 330 YPIVDAAMRQMNTIGWMHNRCRMIVASFLTK-DLLLNWQLGEKYFMQKLIDGDLSANNGG 388
Query: 277 WMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W W + S + + P +K D +G +I
Sbjct: 389 WQWSASSGMDPKPVRIFNPASQAQKFDLDGSYI 421
>gi|424590980|ref|ZP_18030413.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1037(10)]
gi|408033486|gb|EKG70033.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1037(10)]
Length = 469
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQAWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|226326776|ref|ZP_03802294.1| hypothetical protein PROPEN_00636 [Proteus penneri ATCC 35198]
gi|225204613|gb|EEG86967.1| FAD binding domain of DNA photolyase [Proteus penneri ATCC 35198]
Length = 256
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRI-----KKAPPPLSLHGQLLWREFFYCAATRNPNF 186
LSP+L G LS R + N+LY+ +L+WREF+ NPN
Sbjct: 19 LSPYLSIGLLSIRQCF---NRLYQTEPNFLENNTSGAFVWFNELIWREFYQHLIVANPNL 75
Query: 187 DRMLGNPICVQ-IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
+ + + + I W N + W TGFP IDA M QL + GW+H+ R A FL
Sbjct: 76 CKHIAFQLWTEKINWRNNQDEFNAWTQGSTGFPIIDAAMRQLNQTGWMHNRLRMLTASFL 135
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADP 304
+ DL + W G + F L+D D++ N G W W S + +F + P GRK DP
Sbjct: 136 IK-DLLIDWRWGERYFMSQLIDGDFASNNGGWQWAASTGTDAVPYFRIFNPTTQGRKFDP 194
Query: 305 NGDFI 309
+G+FI
Sbjct: 195 DGEFI 199
>gi|428213303|ref|YP_007086447.1| deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific)
[Oscillatoria acuminata PCC 6304]
gi|428001684|gb|AFY82527.1| deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific)
[Oscillatoria acuminata PCC 6304]
Length = 486
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 116/249 (46%), Gaps = 15/249 (6%)
Query: 69 EKYGVPTLEELGFD-----IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRP-KMTP 122
E +P L ELG + + +LP T GGE+ + R+E + W R K T
Sbjct: 185 ETGNLPNLTELGVEKVAIASKAVLPFT--GGESAGIARMEDYF----WTGDRLRTYKETR 238
Query: 123 QSLLA--SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA 180
+L + SP+L GCLS R Y + + K L +LLWR++F
Sbjct: 239 NGMLGPDYSSKFSPWLSLGCLSPRYIYQQVQDYETQRIKNDSTYWLIFELLWRDYFRFIC 298
Query: 181 TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA 240
++ N V IPW+ + + W +TGFP +DA M +L G++ + R
Sbjct: 299 AKHGNAIFRQSGLQGVTIPWEEDWQKFTLWQQGKTGFPLVDANMRELAATGFMSNRGRQN 358
Query: 241 VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 300
VA FLT+ +L ++W+ G + F+ LL+D D N G W + + + F + +K +
Sbjct: 359 VASFLTK-NLGINWQMGAEWFESLLIDYDVCSNWGNWNYTAGVGNDARGFRFFNIIKQSK 417
Query: 301 KADPNGDFI 309
DP GD++
Sbjct: 418 DYDPEGDYV 426
>gi|345004881|ref|YP_004807734.1| deoxyribodipyrimidine photo-lyase [halophilic archaeon DL31]
gi|344320507|gb|AEN05361.1| Deoxyribodipyrimidine photo-lyase [halophilic archaeon DL31]
Length = 498
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 112/253 (44%), Gaps = 22/253 (8%)
Query: 70 KYGVPTLEELGFDIEGLLPPTWKGGE--TEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+ G+PT+EELGF PT + E TEA R R +A + + + P +
Sbjct: 193 RAGLPTIEELGF-----TEPTAELREAGTEAARERLRTFREEA-IFQYDSDRDYPAKDGS 246
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPL----------SLHGQLLWREFFY 177
S+ LS +RFG + R Y + + + + QL WREF+
Sbjct: 247 SR--LSEQIRFGTIGLRELYAETEAAMREARSRDEGEEGSDAQDNVEAFQSQLAWREFYT 304
Query: 178 CAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLA 237
P+ + W + EAL W +TG+P +DA M QLR E W+H+
Sbjct: 305 QVLFFTPHVVTENYKSYEEGLEWREDEEALEAWKAGKTGYPIVDAGMRQLRAEAWMHNRL 364
Query: 238 RHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPV 296
R VA FLT+ DL + W EG F E L D D + + G W W S + Q +F + P
Sbjct: 365 RMIVASFLTK-DLLLDWREGYAHFREKLADHDTANDNGGWQWAASTGTDAQPYFRIFNPT 423
Query: 297 KFGRKADPNGDFI 309
G + D + ++I
Sbjct: 424 TQGERYDADAEYI 436
>gi|121730224|ref|ZP_01682610.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae V52]
gi|147672153|ref|YP_001214921.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae O395]
gi|227119239|ref|YP_002821134.1| deoxyribodipyrimidine photolyase [Vibrio cholerae O395]
gi|262168985|ref|ZP_06036679.1| deoxyribodipyrimidine photolyase [Vibrio cholerae RC27]
gi|121628028|gb|EAX60578.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae V52]
gi|146314536|gb|ABQ19076.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae O395]
gi|227014689|gb|ACP10898.1| deoxyribodipyrimidine photolyase [Vibrio cholerae O395]
gi|262022684|gb|EEY41391.1| deoxyribodipyrimidine photolyase [Vibrio cholerae RC27]
Length = 469
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQAWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|229199867|ref|ZP_04326458.1| Deoxyribodipyrimidine photolyase [Bacillus cereus m1293]
gi|228583609|gb|EEK41836.1| Deoxyribodipyrimidine photolyase [Bacillus cereus m1293]
Length = 476
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTFKKFFSSKLVSYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDLNKLYKRIKKAPPPL-----SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
+ YH L + K +K S Q +WREF Y P N P
Sbjct: 247 VMYHYL--INKSNEKQCSLFEQQVNSFIRQFIWREFSYYLLYHYPFTVYKPLNKNFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNNEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 414
>gi|262173169|ref|ZP_06040846.1| deoxyribodipyrimidine photolyase [Vibrio mimicus MB-451]
gi|261890527|gb|EEY36514.1| deoxyribodipyrimidine photolyase [Vibrio mimicus MB-451]
Length = 469
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
LSP+L G LS R L + + + +L+WREF+ PN +
Sbjct: 239 LSPYLAIGALSARQCVARLYRESEMSALSEGAQVWLSELIWREFYQHLVAIEPNISKSRD 298
Query: 192 N-PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
++ W + E +W TG+P +DA M QL + GW+H+ R VA FLT+ DL
Sbjct: 299 FLEWGARLEWWNDSEKFQRWCEGNTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTK-DL 357
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
+ W G + F L+D D++ N G W W + + Q +F + PV G K DPNGDFI
Sbjct: 358 HIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFI 417
>gi|299769190|ref|YP_003731216.1| deoxyribodipyrimidine photo-lyase [Acinetobacter oleivorans DR1]
gi|298699278|gb|ADI89843.1| deoxyribodipyrimidine photo-lyase [Acinetobacter oleivorans DR1]
Length = 480
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 121/271 (44%), Gaps = 28/271 (10%)
Query: 53 PLLVRQATTPLRDDHDEKYGVPTLEELGFD--IEGLLPPTWKGGETEAMRRL----ERHL 106
P+ +Q + P D + + + +E FD I W GE A+ +L E HL
Sbjct: 174 PIPEKQKSNPESDSNIKSLSLEDIEAF-FDSSISKDQQNLWPTGEGFALEQLDVFIENHL 232
Query: 107 ERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL 166
F K T Q LSP+L G LS R L L+ R + ++
Sbjct: 233 SDYKLERDFPNVKGTSQ--------LSPYLNLGILSIR---QCLQALF-RTEHGNFHIAN 280
Query: 167 HGQ------LLWREFFYCAATRNPNFDRMLGNPICVQ-IPWDVNMEALAKWANAQTGFPW 219
GQ LLWREF+ P+ + + Q I W+ N E L W QTG P
Sbjct: 281 EGQQTWLDELLWREFYQHILFDFPHVSKHIPFKKDTQKIKWNHNPEHLTAWQTGQTGIPI 340
Query: 220 IDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW 279
IDA M QL++ GW+H+ R A FL + +L + W G + F E L+D D + N G W W
Sbjct: 341 IDAGMRQLQKTGWMHNRVRMITAMFLCK-NLLIDWRIGEQWFMEHLIDGDLAANNGGWQW 399
Query: 280 L-SCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
S + +F + P+ +K DPNGD+I
Sbjct: 400 CASTGTDAVPYFRIFNPIAQSKKFDPNGDYI 430
>gi|154250062|ref|YP_001410887.1| deoxyribodipyrimidine photo-lyase [Fervidobacterium nodosum
Rt17-B1]
gi|154153998|gb|ABS61230.1| Deoxyribodipyrimidine photo-lyase [Fervidobacterium nodosum
Rt17-B1]
Length = 436
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
L + LSP++RFG LS R K++ K P QL WREF+Y
Sbjct: 215 LDMSSRLSPYIRFGVLSIR-------KIHNIASKVSPEFV--RQLAWREFWYHIKYNFSE 265
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
F+++ + W + + K+ NAQTG+P +DA + QL++E W+H+ R VA FL
Sbjct: 266 FNKLEFLEKRRNVRWRYDEKLFEKFVNAQTGYPIVDAGIRQLKQENWMHNRVRLIVANFL 325
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
+ DL + W G K F E LLD D +N G W W + + + P+ K DPN
Sbjct: 326 VK-DLLIDWRIGEKFFREYLLDYDEVLNVGNWQWSASVGPDPKPLRIFNPMIQSEKFDPN 384
Query: 306 GDFI 309
++I
Sbjct: 385 CEYI 388
>gi|312883049|ref|ZP_07742780.1| deoxyribodipyrimidine photolyase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369209|gb|EFP96730.1| deoxyribodipyrimidine photolyase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 476
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 124/280 (44%), Gaps = 44/280 (15%)
Query: 51 VTPLLVRQA-----TTPLRDD-------HDEKYGVPTLEELGFDIEGLLPPTWKGGETEA 98
VTPL V +A T P D+ D + P + + +E TE
Sbjct: 163 VTPLNVIKAKKQSNTLPTLDNTRLRLFSQDSPFSYPRVSSNNYKVET----------TEV 212
Query: 99 MRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKR 156
++ L E+K + + R P + S+L SP+L G LS R + +
Sbjct: 213 IQALREFEEKKVKLYAENRDYPSVDATSIL------SPYLAVGILSIR------QCMARV 260
Query: 157 IKKAPPPLS-----LHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNMEALAKW 210
+ + PLS +L+WREF+ A P + NP + W+ + L W
Sbjct: 261 MYQQQLPLSGGREVWQSELIWREFYQHLAYFEPKLSKGESFNPWGEHLRWENSQVFLEAW 320
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
+ +TG+P +DA M QL E GW+H+ R VA FL + DL + W G + F L+D D+
Sbjct: 321 KSGKTGYPIVDAAMKQLNETGWMHNRLRMIVASFLIK-DLHIDWRVGEQYFMSKLVDGDY 379
Query: 271 SVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
N G W W S + Q +F + P+ G + DP+G FI
Sbjct: 380 PANNGGWQWCSSTGCDGQPYFRIFNPITQGERFDPDGRFI 419
>gi|127512408|ref|YP_001093605.1| deoxyribodipyrimidine photo-lyase [Shewanella loihica PV-4]
gi|126637703|gb|ABO23346.1| Deoxyribodipyrimidine photo-lyase type I [Shewanella loihica PV-4]
Length = 478
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 17/194 (8%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPL--SLHG------QLLWREFFY 177
+ +GLSP+L G +S+R L +++ P + + HG +L+WR+F+
Sbjct: 240 IKGTSGLSPYLAIGAISSRWLALQL------VQRHPEVIYDTQHGAFTWLNELIWRDFYK 293
Query: 178 CAATRNPNFDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHL 236
P + P +PW N W +TG+P +DA M QLR GW+H+
Sbjct: 294 HLLFHYPELIKGGSFQPKYESLPWPNNEAHFQAWCEGRTGYPIVDAAMKQLRRTGWMHNR 353
Query: 237 ARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF-FQQFFHCYCP 295
R VA FLT+ L V W +G + F + L+D D+S N G W W + + Q +F + P
Sbjct: 354 LRMIVASFLTK-HLLVDWHKGERFFMQQLIDGDFSANNGGWQWAASTGCDAQPYFRIFNP 412
Query: 296 VKFGRKADPNGDFI 309
+ +K DP G+FI
Sbjct: 413 ITQSQKFDPRGEFI 426
>gi|423575239|ref|ZP_17551358.1| hypothetical protein II9_02460 [Bacillus cereus MSX-D12]
gi|401209847|gb|EJR16604.1| hypothetical protein II9_02460 [Bacillus cereus MSX-D12]
Length = 476
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWEPTEEGAYKTFKKFFSSKLVSYSEGRDFPNQNAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDLNKLYKRIKKAPPPL-----SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
+ YH L + K +K S Q +WREF Y P N P
Sbjct: 247 VMYHYL--INKSNEKQCSLFEQQVNSFIRQFIWREFSYYLLYHYPFTVYKPLNKNFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNNEEELLRVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 414
>gi|399008562|ref|ZP_10711032.1| deoxyribodipyrimidine photolyase [Pseudomonas sp. GM17]
gi|398115998|gb|EJM05769.1| deoxyribodipyrimidine photolyase [Pseudomonas sp. GM17]
Length = 481
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 110/243 (45%), Gaps = 15/243 (6%)
Query: 77 EELGFDIEGLLPP------TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+ L + +EG P W GET A +RL R E + + + + P SQ
Sbjct: 182 DALPWQVEGFPTPGPHLQALWPAGETAAQQRLARFAETQ--LDHYQAERDLPARPGTSQ- 238
Query: 131 GLSPFLRFGCLSTRLFYHDL--NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDR 188
LSP+L G LS R H N + +P ++ +LLWREF+ P R
Sbjct: 239 -LSPYLAAGVLSPRQCLHAALQNNRGEFASGSPGAVTWINELLWREFYKHILVGYPRVSR 297
Query: 189 MLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
P + W E LA A+TG P IDA M QL E GW+H+ R VA FLT+
Sbjct: 298 HRAFRPETEAVAWRDAPEELAACQQARTGLPIIDAAMRQLLETGWMHNRLRMIVAMFLTK 357
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNG 306
+L + W +G + F L+D D + N G W W S + +F + P+ ++ D G
Sbjct: 358 -NLLIDWRQGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSQRFDSQG 416
Query: 307 DFI 309
FI
Sbjct: 417 TFI 419
>gi|395005572|ref|ZP_10389447.1| deoxyribodipyrimidine photolyase [Acidovorax sp. CF316]
gi|394316499|gb|EJE53223.1| deoxyribodipyrimidine photolyase [Acidovorax sp. CF316]
Length = 487
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 107/243 (44%), Gaps = 15/243 (6%)
Query: 71 YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+ VP L LGF+ G+ P + G ++ + R +F P + S L
Sbjct: 193 HAVPPLAALGFEPAGMALPAGESGAQALFEDFQQRIGRYEDARNF--PAVKGPSYL---- 246
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRML 190
S LRFG +S RL + L IK + +L+WR+F++ +P+
Sbjct: 247 --SVHLRFGTISPRLLARTAHGL--AIKGNQGAATWLSELVWRDFYHQILAHHPHVVEHS 302
Query: 191 GNPICVQIPWDVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
P I W+ EA A W +TG+P +DA M Q+ + G++H+ R VA FL +
Sbjct: 303 FKPAYDAIAWESGPEAQELFAAWCEGRTGYPLVDAAMAQINQTGYMHNRLRMVVASFLVK 362
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNG 306
DL + W G F L D D + N G W W S S Q +F + PV K D G
Sbjct: 363 -DLGIDWRWGEAYFATHLNDFDLAANNGGWQWASSSGCDAQPYFRIFNPVSQSEKFDARG 421
Query: 307 DFI 309
FI
Sbjct: 422 QFI 424
>gi|419828231|ref|ZP_14351722.1| DNA photolyase family protein [Vibrio cholerae HC-1A2]
gi|419833153|ref|ZP_14356614.1| DNA photolyase family protein [Vibrio cholerae HC-61A2]
gi|422918665|ref|ZP_16952966.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-02A1]
gi|423779915|ref|ZP_17713999.1| DNA photolyase family protein [Vibrio cholerae HC-55C2]
gi|423839645|ref|ZP_17717748.1| DNA photolyase family protein [Vibrio cholerae HC-59A1]
gi|423867628|ref|ZP_17721422.1| DNA photolyase family protein [Vibrio cholerae HC-60A1]
gi|423999226|ref|ZP_17742419.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-02C1]
gi|424011242|ref|ZP_17754110.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-55B2]
gi|424021069|ref|ZP_17760839.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-59B1]
gi|424626283|ref|ZP_18064733.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-50A1]
gi|424627178|ref|ZP_18065542.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-51A1]
gi|424630973|ref|ZP_18069196.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-52A1]
gi|424637890|ref|ZP_18075887.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-55A1]
gi|424641791|ref|ZP_18079663.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-56A1]
gi|424646307|ref|ZP_18084035.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-57A1]
gi|443525106|ref|ZP_21091302.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-78A1]
gi|341634315|gb|EGS59075.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-02A1]
gi|408010060|gb|EKG47937.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-50A1]
gi|408021264|gb|EKG58528.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-56A1]
gi|408021477|gb|EKG58729.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-55A1]
gi|408029047|gb|EKG65873.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-52A1]
gi|408041001|gb|EKG77142.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-57A1]
gi|408061060|gb|EKG95655.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-51A1]
gi|408623304|gb|EKK96258.1| DNA photolyase family protein [Vibrio cholerae HC-1A2]
gi|408638621|gb|EKL10508.1| DNA photolyase family protein [Vibrio cholerae HC-55C2]
gi|408647223|gb|EKL18751.1| DNA photolyase family protein [Vibrio cholerae HC-60A1]
gi|408648057|gb|EKL19488.1| DNA photolyase family protein [Vibrio cholerae HC-59A1]
gi|408650477|gb|EKL21752.1| DNA photolyase family protein [Vibrio cholerae HC-61A2]
gi|408849615|gb|EKL89628.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-02C1]
gi|408864943|gb|EKM04356.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-59B1]
gi|408870969|gb|EKM10231.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-55B2]
gi|443456469|gb|ELT20140.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-78A1]
Length = 469
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVKWGARLEWCNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|372266991|ref|ZP_09503039.1| deoxyribodipyrimidine photolyase [Alteromonas sp. S89]
Length = 485
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 94/188 (50%), Gaps = 17/188 (9%)
Query: 132 LSPFLRFGCLSTRLFY-----HDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
LSP+L G +S R H+ +L K A +S +LLWREF+ NF
Sbjct: 254 LSPYLNCGTVSIRQCVQLAAEHNDGRLDGPSKGATTWIS---ELLWREFYQHLVV---NF 307
Query: 187 DRMLGN----PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
R+ N P +PW E A+W QTG P +DA M QL + GW+H+ R VA
Sbjct: 308 PRVCRNKPFKPETEAVPWSDREEDFARWCEGQTGVPIVDAAMRQLNQTGWMHNRLRMVVA 367
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRK 301
FLT+ +L W +G + F L+DAD++ N G W W S + +F + P ++
Sbjct: 368 SFLTK-NLLTDWRKGEQYFMRQLVDADFAANNGGWQWAASTGTDAAPYFRVFNPYSQSKR 426
Query: 302 ADPNGDFI 309
DP+G+FI
Sbjct: 427 FDPDGEFI 434
>gi|262278230|ref|ZP_06056015.1| deoxyribodipyrimidine photolyase FAD-binding [Acinetobacter
calcoaceticus RUH2202]
gi|262258581|gb|EEY77314.1| deoxyribodipyrimidine photolyase FAD-binding [Acinetobacter
calcoaceticus RUH2202]
Length = 480
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 106/231 (45%), Gaps = 25/231 (10%)
Query: 91 WKGGETEAMRRLE----RHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLF 146
W GE A+ +L+ HL F K T Q LSP+L G LS R
Sbjct: 213 WPTGEDFALEQLDLFINDHLSHYKLERDFPNVKGTSQ--------LSPYLNLGILSIR-- 262
Query: 147 YHDLNKLYKRIKKAPPPLSLHGQ------LLWREFFYCAATRNPNFDRMLGNPICVQ-IP 199
L L+ R + L+ GQ LLWREF+ P+ + Q I
Sbjct: 263 -QCLQALF-RAEHGNFHLTNEGQQTWLDELLWREFYQHILFDFPHVSKHYPFKKNTQNIK 320
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ N E L W N QTG P IDA M QL++ GW+H+ R A FL + +L + W G +
Sbjct: 321 WENNQEHLVAWQNGQTGIPIIDAGMRQLQKTGWMHNRVRMITAMFLCK-NLLIDWRVGEQ 379
Query: 260 IFDELLLDADWSVNAGMWMWL-SCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F + L+D D + N G W W S + +F + P+ +K DPNGD+I
Sbjct: 380 WFMQHLIDGDLAANNGGWQWCASTGTDAVPYFRIFNPIAQSKKFDPNGDYI 430
>gi|392543612|ref|ZP_10290749.1| deoxyribodipyrimidine photolyase [Pseudoalteromonas piscicida JCM
20779]
Length = 459
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 112/252 (44%), Gaps = 14/252 (5%)
Query: 62 PLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMT 121
PL H + P E+ + E W + + + R ++ K +A + +
Sbjct: 167 PLDKQHKANFKKPAFFEMTNESE-----KWPADDNAIVTIVNRFIKDK--LADYQDDRDF 219
Query: 122 PQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAP--PPLSLHGQLLWREFFYCA 179
P + +GLSP+L G +S + + Y + + P P +L+WREF+
Sbjct: 220 PA--IKGTSGLSPYLALGIVSPKQLIAQIQLHYPEVLENPSKPEFCWVNELIWREFYRHL 277
Query: 180 ATRNPNFDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLAR 238
P + N + W + +A W N QTG+P +DA M QL + GW+H+ R
Sbjct: 278 IVAFPRLCKGFNFNDKYNAVRWCDDSQAFELWCNGQTGYPIVDAAMRQLNKTGWMHNRLR 337
Query: 239 HAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVK 297
VA FLT+ L + W +G F L+D D + N G W W + + Q +F + P+
Sbjct: 338 MIVASFLTK-HLLIDWRKGEAYFMSKLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPIT 396
Query: 298 FGRKADPNGDFI 309
K DP+G FI
Sbjct: 397 QSEKFDPDGSFI 408
>gi|317419959|emb|CBN81995.1| Cryptochrome DASH [Dicentrarchus labrax]
Length = 521
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 18/290 (6%)
Query: 26 KTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEG 85
+ P Y QF+ V P TP ++ + L E+ +PT E+L E
Sbjct: 154 RLPDVYTQFRKAVETQSRVRPVFP--TPEQLKPLPSGL-----EEGAIPTAEDLQ-QTEP 205
Query: 86 LLPPT----WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFG 139
L P GGE++ + RL+ + VA++ K T L+ T +P+L G
Sbjct: 206 LTDPRSAFPCSGGESQVLARLKHYFWDTDAVATY---KETRNGLIGVDYSTKFAPWLAMG 262
Query: 140 CLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
C+S R YH + + K + +LLWR++F + N + IP
Sbjct: 263 CISPRYIYHQIKQYEKERTANQSTYWVIFELLWRDYFKFVGVKYGNRLFQVKGLQDKSIP 322
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W +M+ W QTG P++DA M +L G++ + R VA FLT+ DL + W G +
Sbjct: 323 WKKDMKLFNAWKEGQTGVPFVDANMRELAMTGFMSNRGRQNVASFLTK-DLGLDWRMGAE 381
Query: 260 IFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F+ LL+D D N G W++ + + + +K G D NGD++
Sbjct: 382 WFEYLLIDHDVCSNYGNWLYSAGIGNDPRENRKFNMIKQGLDYDSNGDYV 431
>gi|171463059|ref|YP_001797172.1| deoxyribodipyrimidine photo-lyase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171192597|gb|ACB43558.1| Deoxyribodipyrimidine photo-lyase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 490
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 129/286 (45%), Gaps = 35/286 (12%)
Query: 33 QFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGF---DIEGLLPP 89
Q + + A +P P + P ++ + PL P+LE +GF IE LPP
Sbjct: 169 QEKDLAAYECNPKPGQLAAIP---KKISKPL----------PSLESMGFCPTGIESYLPP 215
Query: 90 TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHD 149
+GG+ LE L R + + + P + + LS LRFG LS R
Sbjct: 216 GSEGGQA----FLEDFLTR---IDQYQISRDFPA--IKGVSYLSTHLRFGMLSIRGL--- 263
Query: 150 LNKLYKRIKKAPPPLSL-HGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNMEA- 206
+ + ++R+ ++ +L+WR+F++ +P + P I W+ A
Sbjct: 264 VREAHRRMLAGSMGATIWLSELIWRDFYFMILANHPRLAKGASFKPDYDNIVWESGATAK 323
Query: 207 --LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDEL 264
W +TG+P +DA M QL + G++H+ R VA FLT+ DL + W G F E
Sbjct: 324 KLFTAWCEGKTGYPLVDAAMHQLNQSGYMHNRLRMVVASFLTK-DLGIDWRWGEAYFAEH 382
Query: 265 LLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
L D + S N G W W+S S Q +F + P+ K DP G FI
Sbjct: 383 LNDFELSSNNGGWQWVSSSGCDAQPYFRIFNPITQSEKFDPEGKFI 428
>gi|392554726|ref|ZP_10301863.1| deoxyribodipyrimidine photolyase [Pseudoalteromonas undina NCIMB
2128]
Length = 464
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 7/202 (3%)
Query: 112 VASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQ 169
+AS+ + P + +GLSP+L G +S++ ++ + Y I + +
Sbjct: 214 LASYDDVRDIPS--VKGTSGLSPYLALGVVSSKQLMVNIQQHYPDILTTSKSKTFTWVNE 271
Query: 170 LLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLR 228
L+WREF+ P R N + W + +W +TG+P +DA M QL
Sbjct: 272 LIWREFYKHLIAEFPKLSRGANFNEKYDSVSWRDSDAEFKQWCEGRTGYPLVDAAMQQLL 331
Query: 229 EEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ 288
+ GW+H+ R VA FLT+ L + W +G + F + L+D D + N G W W + + Q
Sbjct: 332 QTGWMHNRLRMVVASFLTKH-LLIDWRKGEQFFMQHLIDGDLASNNGGWQWAASTGCDAQ 390
Query: 289 -FFHCYCPVKFGRKADPNGDFI 309
+F + P+ + DPNGDFI
Sbjct: 391 PYFRVFNPITQSERFDPNGDFI 412
>gi|409991103|ref|ZP_11274395.1| DASH family cryptochrome [Arthrospira platensis str. Paraca]
gi|291567701|dbj|BAI89973.1| deoxyribopyrimidine photolyase [Arthrospira platensis NIES-39]
gi|409938041|gb|EKN79413.1| DASH family cryptochrome [Arthrospira platensis str. Paraca]
Length = 490
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 115/244 (47%), Gaps = 13/244 (5%)
Query: 73 VPTLEELG-----FDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
+PTL ELG FD +L + GGET + RL + R+ + ++ K T +L
Sbjct: 191 IPTLTELGITPAPFDERSVL--DFAGGETAGLSRLNDYFWRRDCLKNY---KQTRNGMLG 245
Query: 128 SQ--TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
S + SP+L GCLS R Y + + K L +LLWR++F ++
Sbjct: 246 SDYSSKFSPWLANGCLSPRWIYQQVQDYQHQRVKNDSTYWLVFELLWRDYFRFICLKHGP 305
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
V+IPW N E W TGFP +DA M +L G++ + R VA FL
Sbjct: 306 KVFYKSGLQGVKIPWGENWEQWQIWCQGLTGFPLVDANMRELAATGFMSNRGRQNVASFL 365
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPN 305
T+ +L ++W+ G + F+ +L+D D N G W + + + F + K + DP
Sbjct: 366 TK-NLGINWQMGAEWFESVLIDYDVCSNWGNWNYTAGVGNDGRGFRYFNIAKQSQDYDPM 424
Query: 306 GDFI 309
GD++
Sbjct: 425 GDYV 428
>gi|167895131|ref|ZP_02482533.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei 7894]
Length = 299
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 113/236 (47%), Gaps = 7/236 (2%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPF 135
LE G D G L W+ GE A RRL ++ + + + + P +AS + LSP+
Sbjct: 10 LEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSR--LGGYAVERDRPG--IASTSRLSPY 65
Query: 136 LRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGNPI 194
+RFG LS R +H Y L +L WREF + P+ R
Sbjct: 66 VRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLRHT 125
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L + W
Sbjct: 126 LDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLIDW 184
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 185 RAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 240
>gi|428770667|ref|YP_007162457.1| deoxyribodipyrimidine photo-lyase type I [Cyanobacterium aponinum
PCC 10605]
gi|428684946|gb|AFZ54413.1| deoxyribodipyrimidine photo-lyase type I [Cyanobacterium aponinum
PCC 10605]
Length = 473
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 10/241 (4%)
Query: 72 GVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG 131
+P+L +LGF + LP + GE A+ RLE + + + ++ + P L +
Sbjct: 187 NIPSLNDLGFPWDADLPLS--PGEESALERLEYFCQ--SLIYNYECDRNYP--FLDGTSQ 240
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPP---LSLHGQLLWREFFYCAATRNPNFDR 188
LS L+FG +S R + ++ ++ WREF+ P
Sbjct: 241 LSAALKFGAISVRTIWKKSQAELTNCNSDEARENIIAWQKEIAWREFYQHCLYFFPQLAE 300
Query: 189 MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
Q PW+ + + W +TG+P +DA M QL E GW+H+ R VA FLT+
Sbjct: 301 GAYREQFKQFPWENDEKKFQAWCEGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFLTK- 359
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
DL + W G K F + L D D + N G W W + S + + P +K DP ++
Sbjct: 360 DLIIDWRWGEKYFMQKLYDGDLAANNGGWQWSASSGMDPKPLRIFNPASQAQKFDPEAEY 419
Query: 309 I 309
I
Sbjct: 420 I 420
>gi|238828068|pdb|2VTB|B Chain B, Structure Of Cryptochrome 3 - Dna Complex
Length = 525
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 134/286 (46%), Gaps = 17/286 (5%)
Query: 28 PLTYHQF-QSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGL 86
P Y QF +S+ AK S P++ TP DD + VPTLE+LG + + +
Sbjct: 192 PDVYTQFRKSVEAKCSIRSSTRIPLS-----LGPTPSVDDWGD---VPTLEKLGVEPQEV 243
Query: 87 LPPT-WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFGCLST 143
+ GGE+ + R+ + +K + + K T +L T SP+L FGC+S
Sbjct: 244 TRGMRFVGGESAGVGRVFEYFWKKDLLKVY---KETRNGMLGPDYSTKFSPWLAFGCISP 300
Query: 144 RLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVN 203
R Y ++ + K + +L+WR++F + + N LG P V W +
Sbjct: 301 RFIYEEVQRYEKERVANNSTYWVLFELIWRDYFRFLSIKCGNSLFHLGGPRNVNGKWSQD 360
Query: 204 MEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
+ W +A+TG+P IDA M +L G++ + R V FL R D+ + W G + F+
Sbjct: 361 QKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVR-DMGLDWRMGAEWFET 419
Query: 264 LLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
LLD D N G W + + + ++ + P K + DP G+++
Sbjct: 420 CLLDYDPCSNYGNWTYGAGVNDPREDRYFSIP-KQAQNYDPEGEYV 464
>gi|229588295|ref|YP_002870414.1| deoxyribodipyrimidine photo-lyase [Pseudomonas fluorescens SBW25]
gi|229360161|emb|CAY47018.1| deoxyribodipyrimidine photo-lyase [Pseudomonas fluorescens SBW25]
Length = 481
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 109/237 (45%), Gaps = 15/237 (6%)
Query: 83 IEGLLPPT------WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
+EG PP+ W GE EA RRL+ +++ ++ + + P SQ LS +L
Sbjct: 188 VEGFEPPSQALRALWPAGEDEARRRLDAFADQQ--ISYYKDERDFPAKPGTSQ--LSAYL 243
Query: 137 RFGCLSTRLFYHD-LNKLYKRIKKAP-PPLSLHGQLLWREFFYCAATRNPNFDRMLG-NP 193
G +S R H L + ++ +LLWREF+ P R P
Sbjct: 244 AAGVVSPRQCLHAALQTNGGEFESGDMGAITWINELLWREFYKHILVGYPRVSRHRAFRP 303
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+ W + LA W A+TG P IDA M QL E GW+H+ R VA FLT+ +L +
Sbjct: 304 ETEAVAWRNAPKDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTK-NLLID 362
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
W EG + F L+D D + N G W W S + +F + P+ K D +G FI
Sbjct: 363 WREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDSDGVFI 419
>gi|448474041|ref|ZP_21602009.1| deoxyribodipyrimidine photolyase [Halorubrum aidingense JCM 13560]
gi|445818321|gb|EMA68180.1| deoxyribodipyrimidine photolyase [Halorubrum aidingense JCM 13560]
Length = 504
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 110/247 (44%), Gaps = 19/247 (7%)
Query: 73 VPTLEELGF-DIEGLLPPTWKGGETEAMR-RLERHLERKAWVASFGRPKMTPQSLLASQT 130
+P L ELGF + + + P TEA R RL L V ++ + P S+
Sbjct: 206 LPALTELGFAEPDAEIGPAG----TEAARDRLGAFLSEA--VFAYDAARDYPAREATSR- 258
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-------LHGQLLWREFFYCAATRN 183
LS FL++G + R Y + + P QL WREF+ N
Sbjct: 259 -LSAFLKYGEIGVREVYEATERAMAAAESDDRPAEHAESVAEYQQQLAWREFYTQVLYHN 317
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P I W + E +A W +TG+P +DA M QLR E ++H+ R VA
Sbjct: 318 PEVVTENYKAYEAGIEWRDDPEEIAAWKRGETGYPIVDAGMRQLRAEAFMHNRVRMIVAS 377
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKA 302
FLT+ DL W +G + F E L D D + + G W W S + Q +F + P+ G +
Sbjct: 378 FLTK-DLLADWRQGYEYFRETLADHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERY 436
Query: 303 DPNGDFI 309
DP+ ++I
Sbjct: 437 DPDAEYI 443
>gi|359440272|ref|ZP_09230193.1| deoxyribodipyrimidine photo-lyase [Pseudoalteromonas sp. BSi20429]
gi|358037809|dbj|GAA66442.1| deoxyribodipyrimidine photo-lyase [Pseudoalteromonas sp. BSi20429]
Length = 464
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFFYCAATRNPNFD 187
+GLSP+L G +ST+ ++ + Y I + +L+WREF+ P
Sbjct: 230 SGLSPYLALGIVSTKQLLINIQQRYPDILTTSKSKTFTWINELVWREFYRHLIAEFPKLS 289
Query: 188 RMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
R N + W + W +TG+P +DA M QL++ GW+H+ R VA FLT
Sbjct: 290 RGDNFNEKYNAVVWRKSENEFTAWCEGRTGYPLVDAAMLQLKQTGWMHNRLRMVVASFLT 349
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPN 305
+ L + W EG + F + L+D D + N G W W + + Q +F + P++ + DP
Sbjct: 350 KH-LLIDWREGERFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRVFNPIRQSERFDPT 408
Query: 306 GDFI 309
G FI
Sbjct: 409 GKFI 412
>gi|158335578|ref|YP_001516750.1| deoxyribodipyrimidine photolyase [Acaryochloris marina MBIC11017]
gi|158305819|gb|ABW27436.1| deoxyribodipyrimidine photolyase [Acaryochloris marina MBIC11017]
Length = 484
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 130/289 (44%), Gaps = 21/289 (7%)
Query: 28 PLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGF-----D 82
P + QF+ V K + P P Q+ + L D + +P LE+ G D
Sbjct: 149 PEVFTQFRKQVEK------SAKPKAPFPTPQSLSTLPDIAPGE--LPQLEDWGLSSPEPD 200
Query: 83 IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA--SQTGLSPFLRFGC 140
++ + GGET A+ RL+ ++ + R K T +L T SP+L GC
Sbjct: 201 ARAMI--QFSGGETAALARLQDYIWEQD---RLKRYKETRNGMLQPNDSTKFSPWLALGC 255
Query: 141 LSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPW 200
+S R + + + K L +L+WR++F ++ + + +PW
Sbjct: 256 VSPRYIHQQVKTYEQDRVKNNSTYWLIFELIWRDYFRFICAKHGKRVFRVSGLQGLALPW 315
Query: 201 DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKI 260
N E KW QTGFP IDA M +L G++ + R VA FLT+ +L ++W+ G +
Sbjct: 316 QDNRETFEKWQTGQTGFPLIDANMRELAATGFMSNRGRQNVASFLTK-NLGLNWQMGAEW 374
Query: 261 FDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
F+ L+D D N G W + + + F + VK + DP GD++
Sbjct: 375 FESCLIDYDVCSNWGNWNYAAGVGNDARGFRFFNIVKQAKDYDPQGDYV 423
>gi|434391947|ref|YP_007126894.1| deoxyribodipyrimidine photo-lyase type I [Gloeocapsa sp. PCC 7428]
gi|428263788|gb|AFZ29734.1| deoxyribodipyrimidine photo-lyase type I [Gloeocapsa sp. PCC 7428]
Length = 479
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 120/274 (43%), Gaps = 20/274 (7%)
Query: 47 AEAPVTPLLVRQATTPLRD---DHDEKYGV---PTLEELGF--DIEGLLPPTWKGGETEA 98
+++ P+ Q T L D D ++ GV PT ++LGF D + ++ P GE A
Sbjct: 159 SKSKAEPVATLQGVTGLTDTERDIAQQAGVIPLPTAKDLGFVWDRDLVIAP----GEAAA 214
Query: 99 MRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK 158
RLE KA + + + P SQ LS L+FG + R + + +
Sbjct: 215 QERLE-EFSYKA-ITEYKEQRNFPAVNGTSQ--LSAALKFGAIGIRTVWAATVAALENSR 270
Query: 159 KAPPPLSLHG---QLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQT 215
S+ +L WREF+ A P P+ N E W +T
Sbjct: 271 SDETDTSIRAWQQELAWREFYQHAMYHFPELATGAYREAFKNFPYQNNEELFQAWCAGKT 330
Query: 216 GFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAG 275
G+P +DA M Q+ E GW+H+ R VA FLT+ DL + G K F + L+D D S N G
Sbjct: 331 GYPIVDAAMRQMNESGWMHNRCRMIVANFLTK-DLLIDPRLGEKYFYQRLIDGDLSANNG 389
Query: 276 MWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W W + S + + P +K DP G++I
Sbjct: 390 GWQWSASSGMDPKPVRIFNPASQAQKFDPEGEYI 423
>gi|377821540|ref|YP_004977911.1| deoxyribodipyrimidine photo-lyase [Burkholderia sp. YI23]
gi|357936375|gb|AET89934.1| Deoxyribodipyrimidine photo-lyase [Burkholderia sp. YI23]
Length = 498
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 111/248 (44%), Gaps = 18/248 (7%)
Query: 70 KYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ 129
++ +P+L LGF P + G + A + ER ++ +GR + P L
Sbjct: 187 RHAIPSLAALGF--SDAHAPAFPAGTSGAFELFDDFRER---MSDYGRTRDFPA--LKGP 239
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF--- 186
+ L LR G +S R + + K + G+L+WREF++ P+
Sbjct: 240 SYLGVHLRHGTMSIRALARSAHDAQRHGDKGAE--TWLGELIWREFYFSVLHHFPHVGLP 297
Query: 187 -DRMLGNPICVQIPWDVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
D P +I W+ A A W Q+G+P +DA M Q+ G++H+ R VA
Sbjct: 298 GDHRAFRPEYDRIGWETGDAADANFAAWCAGQSGYPIVDAAMRQINASGYMHNRLRMVVA 357
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRK 301
FLT+ DL + W G F+ LL D D S N G W W + S Q +F + PV +K
Sbjct: 358 SFLTK-DLGIDWRRGEAYFEALLNDFDLSNNNGGWQWAASSGCDAQPYFRIFNPVTQSKK 416
Query: 302 ADPNGDFI 309
D G FI
Sbjct: 417 FDAAGTFI 424
>gi|365880713|ref|ZP_09420069.1| Deoxyribodipyrimidine photo-lyase (DNA photolyase)
(Photoreactivating enzyme) [Bradyrhizobium sp. ORS 375]
gi|365291224|emb|CCD92600.1| Deoxyribodipyrimidine photo-lyase (DNA photolyase)
(Photoreactivating enzyme) [Bradyrhizobium sp. ORS 375]
Length = 422
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 109/243 (44%), Gaps = 19/243 (7%)
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
LE D G L TW+ GE A +RL LE V+S+ + P + + + LSP
Sbjct: 129 ALEPTRPDWAGGLRTTWQPGERTAQQRLRGFLESA--VSSYAADRDRPD--IDATSRLSP 184
Query: 135 FLRFGCLSTRLFYH-------DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFD 187
LRFG +S R +H + L K I K ++ WREF NP+
Sbjct: 185 HLRFGEISPRQIWHAARFAAEERPALAKGIDK------FLSEVGWREFSRHLLYNNPDLA 238
Query: 188 RMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
P PW + ALA W QTG+P +DA M +L G +H+ R A L +
Sbjct: 239 TRNLQPSFDPFPWTQDDAALAAWQRGQTGYPIVDAGMRELWHTGSMHNRVRMVAASLLVK 298
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF-FQQFFHCYCPVKFGRKADPNG 306
L + W +G + F + L+DAD N W W++ S +F + PV G K D NG
Sbjct: 299 -HLLIDWRQGEQWFWDTLVDADAGSNPASWQWVAGSGADAAPYFRVFNPVLQGEKFDANG 357
Query: 307 DFI 309
++
Sbjct: 358 SYV 360
>gi|336310565|ref|ZP_08565537.1| deoxyribodipyrimidine photolyase [Shewanella sp. HN-41]
gi|335866295|gb|EGM71286.1| deoxyribodipyrimidine photolyase [Shewanella sp. HN-41]
Length = 477
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 44 PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLE 103
P P AP+ P+L PL +H K W GE +A L
Sbjct: 165 PLPVPAPLGPVLAE--PKPLLFNHVTKVS---------------SEFWAAGEGQAKLLLS 207
Query: 104 RHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRI--KKAP 161
+++K V + + + P + + +SP+L G +S R L + +
Sbjct: 208 AFIQQK--VQDYKQDRDFPA--IDGTSSMSPYLAIGVVSPRQCVAALLHHFPEVIADDTS 263
Query: 162 PPLSLHGQLLWREFF------YCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQT 215
P + +L WREF+ + +++ NF+R + + W N + A W +T
Sbjct: 264 PARTWLNELTWREFYRHLLVAFPDLSKSHNFNRQADH-----VQWRNNPQEFAAWCEGRT 318
Query: 216 GFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAG 275
G+P IDA M QL + GW+H+ R VA FLT+ L + W G + F + L+D D + N G
Sbjct: 319 GYPIIDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERYFRQKLIDGDLAANNG 377
Query: 276 MWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W W + C Q +F + P+ K DP+G FI
Sbjct: 378 GWQWSAGCGCDAQPYFRIFNPMSQSEKFDPDGSFI 412
>gi|427718644|ref|YP_007066638.1| deoxyribodipyrimidine photo-lyase type I [Calothrix sp. PCC 7507]
gi|427351080|gb|AFY33804.1| deoxyribodipyrimidine photo-lyase type I [Calothrix sp. PCC 7507]
Length = 495
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 124/296 (41%), Gaps = 20/296 (6%)
Query: 22 KNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYG---VPTLEE 78
+ GG +P T + + K S P P L + T + +K G +PT ++
Sbjct: 157 RTGGNSPYTVY---TPFWKNWSSKPKAQPAQTLQNAEGLTADEQEIAKKVGAQPLPTAKD 213
Query: 79 LGF--DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
LGF D E ++ P GE A LE + + + P + + LS L
Sbjct: 214 LGFIWDGELIIAP----GEAAARSLLEEFCASS--INEYQEQRNFP--AIEGTSKLSAAL 265
Query: 137 RFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRMLGNP 193
+FG + R + + + + + +L WREF+ A P
Sbjct: 266 KFGAIGIRTVWQATLEALENSRSDEAKAGIRTWQQELAWREFYQHAMYNFPELADGAYRE 325
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
PW+ N E W TG+P +DA M Q+ E GW+H+ R VA FLT+ DL ++
Sbjct: 326 TFKNFPWENNTEKFQAWCEGNTGYPIVDAAMRQMNESGWMHNRCRMIVASFLTK-DLLIN 384
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ G K F + L+D D S N G W W + S + + P +K D G++I
Sbjct: 385 PQWGEKYFMQQLIDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAQKFDAEGEYI 440
>gi|408483909|ref|ZP_11190128.1| deoxyribodipyrimidine photolyase [Pseudomonas sp. R81]
Length = 481
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 108/237 (45%), Gaps = 15/237 (6%)
Query: 83 IEGLLPPT------WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
+EG PP+ W GE EA RRL+ +++ ++ + + P SQ LS +L
Sbjct: 188 VEGFAPPSDSLRALWPAGEDEARRRLDAFADQQ--ISYYKDERDFPAKPGTSQ--LSAYL 243
Query: 137 RFGCLSTRLFYHD-LNKLYKRIKKAP-PPLSLHGQLLWREFFYCAATRNPNFDRMLG-NP 193
G +S R H L + ++ +LLWREF+ P R P
Sbjct: 244 AAGVVSPRQCLHAALQTNGGEFESGDLGAITWINELLWREFYKHILVGYPRVSRHRAFRP 303
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+ W + LA W A+TG P IDA M QL E GW+H+ R VA FLT+ +L +
Sbjct: 304 ETEAVAWRNAPKDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTK-NLLID 362
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
W EG + F L+D D + N G W W S + +F + P+ K D G FI
Sbjct: 363 WREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDAEGVFI 419
>gi|336322699|ref|YP_004602666.1| deoxyribodipyrimidine photo-lyase [Flexistipes sinusarabici DSM
4947]
gi|336106280|gb|AEI14098.1| Deoxyribodipyrimidine photo-lyase [Flexistipes sinusarabici DSM
4947]
Length = 460
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNP 184
L + L P LRFG +S R +L + K +K+ + QLLWREFF P
Sbjct: 229 LDETSHLGPHLRFGTISIR----ELVRFVKTLKEDGFQTETFMKQLLWREFFNSVLYNFP 284
Query: 185 NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ + N V IPW+ +++ W + TG P +DA M QL + G++H+ R VA F
Sbjct: 285 HSE--FNNFKNVNIPWENDLKLFEHWKSGTTGVPVVDAAMRQLNKTGYMHNRLRMVVASF 342
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS---CSSFFQQFFHCYCPVKFGRK 301
LT+ DL + W G + F + L D + S N G W W + C + Q +F + P + K
Sbjct: 343 LTK-DLHIDWRWGEEYFKQKLFDYEASYNIGSWQWAAGTGCDA--QPYFRVFNPYRQAEK 399
Query: 302 ADPNGDFI 309
D N +FI
Sbjct: 400 FDKNAEFI 407
>gi|254284783|ref|ZP_04959750.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae AM-19226]
gi|417818812|ref|ZP_12465432.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HE39]
gi|421349744|ref|ZP_15800113.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HE-25]
gi|423938868|ref|ZP_17732353.1| DNA photolyase family protein [Vibrio cholerae HE-40]
gi|423968686|ref|ZP_17735903.1| DNA photolyase family protein [Vibrio cholerae HE-46]
gi|150425568|gb|EDN17344.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae AM-19226]
gi|340043526|gb|EGR04484.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HE39]
gi|395956361|gb|EJH66955.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HE-25]
gi|408664649|gb|EKL35479.1| DNA photolyase family protein [Vibrio cholerae HE-40]
gi|408667250|gb|EKL38000.1| DNA photolyase family protein [Vibrio cholerae HE-46]
Length = 469
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|22297968|ref|NP_681215.1| DNA photolyase [Thermosynechococcus elongatus BP-1]
gi|22294146|dbj|BAC07977.1| DNA photolyase [Thermosynechococcus elongatus BP-1]
Length = 480
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 128/298 (42%), Gaps = 21/298 (7%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMDSPSPAEAP--VTPLL-VRQATTPLRDDHDEKYGVPTL 76
I+ G+ Y F + + P P AP + PL + QAT +PT
Sbjct: 137 IQTKQGQPYTVYSPFWRNWSSLAKPEPVSAPRHLEPLTEIEQATAGTLG----AICLPTA 192
Query: 77 EELGFDIEG--LLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
++LGF G +L P GE A +LE +++ + +G + P + LSP
Sbjct: 193 KDLGFHWSGDLILAP----GEAAAQAQLETFIDQH--IQDYGEQRNYPAQ--PGTSLLSP 244
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRMLG 191
L+FG + R + + S+ +L WREF+ A P+
Sbjct: 245 ALKFGVIGIRRVWTATQAAMAAARSEEAQRSIRTWQQELAWREFYQHALYWFPHLAERPH 304
Query: 192 NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
PW N A W +TG+P +DA M QL E GW+H+ R VA FLT+ DL
Sbjct: 305 REGFATFPWLNNEAHFAAWCEGRTGYPIVDAAMRQLNETGWMHNRCRMIVASFLTK-DLI 363
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
++ + G + F + L+D D + N G W W + S + + P +K DP ++I
Sbjct: 364 INPQWGERYFMQKLIDGDLAANNGGWQWSASSGMDPKPLRIFNPASQAQKFDPEAEYI 421
>gi|384422583|ref|YP_005631942.1| Deoxyribodipyrimidine photolyase [Vibrio cholerae LMA3984-4]
gi|327485291|gb|AEA79697.1| Deoxyribodipyrimidine photolyase [Vibrio cholerae LMA3984-4]
Length = 469
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|46906833|ref|YP_013222.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes serotype
4b str. F2365]
gi|405751816|ref|YP_006675281.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC2378]
gi|424713475|ref|YP_007014190.1| Deoxyribodipyrimidine photo-lyase [Listeria monocytogenes serotype
4b str. LL195]
gi|46880099|gb|AAT03399.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes serotype
4b str. F2365]
gi|404221016|emb|CBY72379.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC2378]
gi|424012659|emb|CCO63199.1| Deoxyribodipyrimidine photo-lyase [Listeria monocytogenes serotype
4b str. LL195]
Length = 467
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 103/225 (45%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL + K VA + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDIGERAANTRLANFI--KHDVADYDKARDFPE--LDKTSHLSRYLRTGEISIRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A + +L WR+F+ PN PI I W+ N E
Sbjct: 245 SLQETEATEGRA----TFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 YFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K D G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDSTGKFI 401
>gi|746118|prf||2017201A DNA photolyase
Length = 486
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 94 GETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTR-LFYHDL 150
GE A++RL+ +++ + A+ P +T S L SP+++ G +S+R ++YH L
Sbjct: 217 GEEHAIKRLQMFTKKRLSGYKANRDFPSITGTSRL------SPYIKTGAVSSRSIYYHIL 270
Query: 151 NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
N + + +L WR+F+ P+ ++ W + + L W
Sbjct: 271 NAE----ADSYSAETFLKELAWRDFYRMVHFYEPDCKDREIMEGYRELNWSHDQDDLTSW 326
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
+TGFP +DA M QL EGW+H+ R A FLT+ DL + W G + F+ +L+D D
Sbjct: 327 KRGETGFPIVDAGMRQLLNEGWMHNRLRMITASFLTK-DLLIDWRLGERYFERMLIDYDP 385
Query: 271 SVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
S N G W W S + +F + PV ++ D NG +I
Sbjct: 386 SSNIGGWQWAASVGTDAVPYFRIFNPVTQSKRFDENGTYI 425
>gi|422920343|ref|ZP_16953666.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae BJG-01]
gi|341650406|gb|EGS74272.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae BJG-01]
Length = 469
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|384181025|ref|YP_005566787.1| deoxyribodipyrimidine photolyase family protein [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|324327109|gb|ADY22369.1| deoxyribodipyrimidine photolyase family protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 476
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWDPTEEGAYKTCKKFFSSKLASYSEGRDFPNENAHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDLNKLYKRIKKAPPPL-----SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
YH L + K ++ S QL+WREF Y P N P
Sbjct: 247 WMYHYL--IDKSTERQCSLFEKQVNSFIRQLIWREFSYYLLYHYPFTVYKPLNKNFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNKEEELLTVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D NG++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>gi|153827504|ref|ZP_01980171.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae MZO-2]
gi|149738567|gb|EDM52922.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae MZO-2]
Length = 469
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|254224596|ref|ZP_04918212.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae V51]
gi|125622659|gb|EAZ50977.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae V51]
Length = 469
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|441504075|ref|ZP_20986072.1| Deoxyribodipyrimidine photolyase [Photobacterium sp. AK15]
gi|441428248|gb|ELR65713.1| Deoxyribodipyrimidine photolyase [Photobacterium sp. AK15]
Length = 485
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 132 LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPP--PLSLHGQLLWREFFYCAATRNPNFDRM 189
LSP+L G LS R L +++ P S +++WREF+ P R
Sbjct: 249 LSPYLTHGALSPRQCVSALLEVFPHCFDEPESGAFSWLNEIIWREFYRHLMVAFPRLSR- 307
Query: 190 LGNPI---CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
P I W + LA W +TGFP +DA M QL+E GW+H+ R A FLT
Sbjct: 308 -DQPFQSWTRNISWRQSESDLAAWQQGRTGFPIVDAAMRQLKETGWMHNRLRMITASFLT 366
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPN 305
+ DL ++W EG + F L+D D + N G W W S + Q +F + P G + DP+
Sbjct: 367 K-DLLINWREGERWFMSQLVDGDLAANNGGWQWAASTGTDAQPYFRVFNPTTQGERFDPD 425
Query: 306 GDFI 309
G FI
Sbjct: 426 GKFI 429
>gi|183179740|ref|ZP_02957951.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae MZO-3]
gi|183013151|gb|EDT88451.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae MZO-3]
Length = 469
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|121703429|ref|XP_001269979.1| deoxyribodipyrimidine photo-lyase Phr1, putative [Aspergillus
clavatus NRRL 1]
gi|119398122|gb|EAW08553.1| deoxyribodipyrimidine photo-lyase Phr1, putative [Aspergillus
clavatus NRRL 1]
Length = 586
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 111/224 (49%), Gaps = 11/224 (4%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
+ GE EA+ RLE+ +E + + R M Q+ + LSP+ G LS R
Sbjct: 311 YPAGEHEALDRLEKFVEERVKDYADARNMMFGQTT----SILSPYFASGSLSARTAVVHA 366
Query: 151 NKLYK-RIKKAPPPL-SLHGQLLWREFFYCAATRNPNFDRMLG--NPICVQIPWDVNMEA 206
K K + + P L S ++ WR+F+ P F M P + W+ +
Sbjct: 367 RKANKGSLDRGDPGLASWISEVAWRDFYKHVLVHWP-FICMNKCFKPEFTNLEWEYDENK 425
Query: 207 LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLL 266
A W +TGFP +DA M Q++ + W+H+ AR VA FL++ DL + W G + F E L+
Sbjct: 426 FAAWCEGKTGFPIVDAAMRQMKHDAWMHNRARMIVASFLSK-DLLIDWRRGERYFMEHLI 484
Query: 267 DADWSVNAGMWMWLSCSSFF-QQFFHCYCPVKFGRKADPNGDFI 309
D D++ N G W + S + Q +F + P++ + DP+G++I
Sbjct: 485 DGDFASNHGGWGFGSSTGVDPQPYFRIFNPLRQSERFDPDGEYI 528
>gi|448688386|ref|ZP_21694219.1| deoxyribodipyrimidine photolyase [Haloarcula japonica DSM 6131]
gi|445779447|gb|EMA30377.1| deoxyribodipyrimidine photolyase [Haloarcula japonica DSM 6131]
Length = 465
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 113/249 (45%), Gaps = 26/249 (10%)
Query: 72 GVPTLEELGFDI-EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+PTL +LGF+ E +PP G EA L L+ V + + P S+
Sbjct: 174 ALPTLADLGFEEPEADVPP---AGTDEARALLNDFLDEN--VYEYEERRDFPADECTSR- 227
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPL---------SLHGQLLWREFFYCAAT 181
LS L+FG + R ++Y R + A QL WREF+
Sbjct: 228 -LSAHLKFGTIGIR-------EVYDRTQDAKEGAGGNHHESVREFQSQLAWREFYTQVLF 279
Query: 182 RNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
+P+ I W+ + E L W + +TG+P +DA M QLR E ++H+ R V
Sbjct: 280 AHPHVVTSNYKSYENSIEWENDEELLQAWKDGETGYPIVDAGMRQLRAEAYMHNRVRMIV 339
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGR 300
A FLT+ DL + W G + F E L+D D + + G W W S + Q +F + P+ G
Sbjct: 340 ASFLTK-DLLIDWRYGYEWFREKLVDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGE 398
Query: 301 KADPNGDFI 309
DP+ ++I
Sbjct: 399 DYDPDAEYI 407
>gi|296110301|ref|YP_003620682.1| hypothetical protein LKI_00850 [Leuconostoc kimchii IMSNU 11154]
gi|339490544|ref|YP_004705049.1| hypothetical protein LGMK_01830 [Leuconostoc sp. C2]
gi|295831832|gb|ADG39713.1| hypothetical protein LKI_00850 [Leuconostoc kimchii IMSNU 11154]
gi|338852216|gb|AEJ30426.1| hypothetical protein LGMK_01830 [Leuconostoc sp. C2]
Length = 478
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE +A + L +E K + + + + P L + + LS +LR G +S R+ +
Sbjct: 205 GEDKARKILSDFIENK--LTQYDQNRDVPS--LDATSHLSRYLRTGEISIRV-------V 253
Query: 154 YKRIKKAPPP---LSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
Y+ IK+AP + +L WR+++ +P + P QI W + W
Sbjct: 254 YEGIKQAPDSDGRSTFIKELCWRDYYNMIYATHPQQNESAIRPEFRQIRWRDDKIGFDDW 313
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
TGFP +DA M QL E GW+H+ R VA FLT+ DL ++W+ G F + L+D D
Sbjct: 314 QTGHTGFPIVDAAMRQLNETGWMHNRLRMIVASFLTK-DLLINWQWGENYFKQKLVDYDP 372
Query: 271 SVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+ N G W W S + +F + P +K DP G FI
Sbjct: 373 ASNIGGWQWAASTGTDSVPYFRIFNPTLQSKKFDPQGLFI 412
>gi|229514567|ref|ZP_04404028.1| deoxyribodipyrimidine photolyase [Vibrio cholerae TMA 21]
gi|229348547|gb|EEO13505.1| deoxyribodipyrimidine photolyase [Vibrio cholerae TMA 21]
Length = 469
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|448659248|ref|ZP_21683216.1| deoxyribodipyrimidine photolyase [Haloarcula californiae ATCC
33799]
gi|445760750|gb|EMA12007.1| deoxyribodipyrimidine photolyase [Haloarcula californiae ATCC
33799]
Length = 465
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 112/241 (46%), Gaps = 14/241 (5%)
Query: 74 PTLEELGFDI-EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
PTL +LGF+ E +P G EA L+ L+ V + + P S+ L
Sbjct: 176 PTLADLGFEEPEADVP---AAGTEEARALLDDFLDEN--VYEYEERRDFPADECTSR--L 228
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATRNPNFDRM 189
S L+FG + R Y D + K S+ QL WREF+ +P+
Sbjct: 229 SAHLKFGTIGIREVY-DRTQAAKEGTGGDRRDSVREFQSQLAWREFYTQVLFAHPHVVSS 287
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
I W+ + E L W + TG+P +DA M QLR+E ++H+ R VA FLT+ D
Sbjct: 288 NYKSYENPIEWENDEELLQAWKDGDTGYPIVDAGMRQLRDEAYMHNRVRMIVASFLTK-D 346
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDF 308
L + W G + F E L+D D + + G W W S + Q +F + P+ G DPN ++
Sbjct: 347 LLIDWRHGYEWFREKLVDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGEDYDPNAEY 406
Query: 309 I 309
I
Sbjct: 407 I 407
>gi|312958863|ref|ZP_07773382.1| DNA photolyase, FAD-binding [Pseudomonas fluorescens WH6]
gi|311286633|gb|EFQ65195.1| DNA photolyase, FAD-binding [Pseudomonas fluorescens WH6]
Length = 480
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 109/237 (45%), Gaps = 15/237 (6%)
Query: 83 IEGLLPPT------WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
++G PP+ W GE EA RRL+ E++ ++ + + P SQ LS +L
Sbjct: 188 VDGFEPPSDCLRALWPAGEDEARRRLDAFAEQQ--ISYYKDERDFPAKPGTSQ--LSAYL 243
Query: 137 RFGCLSTRLFYHD-LNKLYKRIKKAP-PPLSLHGQLLWREFFYCAATRNPNFDRMLG-NP 193
G +S R H L + ++ +LLWREF+ P R P
Sbjct: 244 AAGVVSPRQCLHAALQSNQGEFESGDIGTITWINELLWREFYKHILVGYPRVSRHRAFRP 303
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+ W + LA W A+TG P IDA M QL E GW+H+ R VA FLT+ +L +
Sbjct: 304 ETEAVAWRHAPKDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTK-NLLID 362
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
W EG + F L+D D + N G W W S + +F + P+ K D +G FI
Sbjct: 363 WREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDSDGVFI 419
>gi|153212812|ref|ZP_01948448.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae 1587]
gi|422306345|ref|ZP_16393526.1| DNA photolyase family protein [Vibrio cholerae CP1035(8)]
gi|124116325|gb|EAY35145.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae 1587]
gi|408626618|gb|EKK99461.1| DNA photolyase family protein [Vibrio cholerae CP1035(8)]
Length = 469
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|417822869|ref|ZP_12469467.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HE48]
gi|419836871|ref|ZP_14360311.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-46B1]
gi|421343000|ref|ZP_15793404.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-43B1]
gi|421355393|ref|ZP_15805724.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HE-45]
gi|423734313|ref|ZP_17707526.1| DNA photolyase family protein [Vibrio cholerae HC-41B1]
gi|424008597|ref|ZP_17751545.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-44C1]
gi|340048999|gb|EGR09915.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HE48]
gi|395941567|gb|EJH52244.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-43B1]
gi|395950063|gb|EJH60682.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HE-45]
gi|408631158|gb|EKL03717.1| DNA photolyase family protein [Vibrio cholerae HC-41B1]
gi|408857421|gb|EKL97109.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-46B1]
gi|408865383|gb|EKM04786.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-44C1]
Length = 469
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|297579803|ref|ZP_06941730.1| deoxyribodipyrimidine photolyase [Vibrio cholerae RC385]
gi|297535449|gb|EFH74283.1| deoxyribodipyrimidine photolyase [Vibrio cholerae RC385]
Length = 469
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|384501095|gb|EIE91586.1| hypothetical protein RO3G_16297 [Rhizopus delemar RA 99-880]
Length = 434
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 133/302 (44%), Gaps = 50/302 (16%)
Query: 26 KTPLTYHQFQSIVAKMDSPS------PAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEEL 79
+TP Y F+ + KM+ P P E P P ++ + + G LEEL
Sbjct: 145 QTPKVYAHFRRRIEKMNQPVRPLLQIPDELPAFPDIIWKFPQS-------EQGKDLLEEL 197
Query: 80 ----GFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLS 133
F+ + W GGE A +RLE +L + ++ K T ++ ++ T S
Sbjct: 198 YEAFAFEKDERSAFPWPGGEDAARKRLENYLFKTDGAINY---KQTRNGMIGTEYSTKFS 254
Query: 134 PFLRFGCLSTRLFYHDLNKLY--KRIKKAPPPLS----LHGQLLWREFF--YCAATRNPN 185
+L GCLS RL +H+LN+L K+I K + +LLWR+FF A + N
Sbjct: 255 AYLSHGCLSPRLIWHELNRLQSQKKIDKTGGDEDGIYWIRFELLWRDFFRFLVAGSGNRV 314
Query: 186 F---------------DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREE 230
F D N ++ W N + KW QTG P+IDA M +L
Sbjct: 315 FHLHGFRDMSNKEAQEDLKKKNSYSNKV-WKSNNDQFNKWKVGQTGMPYIDASMRELINT 373
Query: 231 GWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFF 290
G++++ R VA ++ + DL + W G + F+ LL D D N G W + + + F
Sbjct: 374 GFLNNRGRQNVASYIAK-DLELDWRIGAEWFESLLKDHDVYSNYGNWQY---GKYKKDLF 429
Query: 291 HC 292
HC
Sbjct: 430 HC 431
>gi|256823595|ref|YP_003147558.1| deoxyribodipyrimidine photo-lyase [Kangiella koreensis DSM 16069]
gi|256797134|gb|ACV27790.1| Deoxyribodipyrimidine photo-lyase [Kangiella koreensis DSM 16069]
Length = 459
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 11/222 (4%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GE A RL+ L + + + + P + + LSP+L G +S + L
Sbjct: 199 WPAGELAAQDRLKEFLPKAGY---YKEHRDIPA--VKGTSMLSPYLTVGAISAKQCIESL 253
Query: 151 NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
+ Y+ ++A + +++WREF+ NP L + W+ E KW
Sbjct: 254 LEWYEGDQEAFYLDTWLSEIIWREFYRQIIIDNPQISYHLPFKKDAKEVWNGQHELFEKW 313
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
A+TGFP IDA M QL + GW+H+ R VA FL + L + W EG F L+D D+
Sbjct: 314 CQAETGFPLIDAAMRQLIQTGWMHNRLRMNVAMFLNKLCL-IDWREGEAFFMRHLIDGDF 372
Query: 271 SVNAGMWMWLSCSSFFQQ---FFHCYCPVKFGRKADPNGDFI 309
+ N G W W CSS +F P+ ++ DP G FI
Sbjct: 373 ASNNGGWQW--CSSTGADGAPYFRIMSPITQSQRFDPQGKFI 412
>gi|448602427|ref|ZP_21656483.1| deoxyribodipyrimidine photolyase [Haloferax sulfurifontis ATCC
BAA-897]
gi|445747942|gb|ELZ99396.1| deoxyribodipyrimidine photolyase [Haloferax sulfurifontis ATCC
BAA-897]
Length = 482
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 105/240 (43%), Gaps = 10/240 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+PT+ +LGF E G A RL + + R T + + L
Sbjct: 192 LPTISDLGF--EEPTAAVQSAGTEAARERLSAFCADAIYRYADDRDYPTRDAT----SRL 245
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRML 190
S L+FG + R Y + + ++ QL WREF+ +PN
Sbjct: 246 STDLKFGTIGIREVYAATAAAREGVGGERDESVEEFQSQLAWREFYAHVLREHPNVVTEN 305
Query: 191 GNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
I W + E LA W +TG+P +DA M QLREE ++H+ R VA FLT+ DL
Sbjct: 306 YKEYENDIAWRDDSEELAAWKEGKTGYPIVDAGMRQLREETYMHNRVRMIVASFLTK-DL 364
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F E L D D + + G W W S + Q +F + P+ G + DP+G++I
Sbjct: 365 LCDWRHGYAHFREHLADHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPDGEYI 424
>gi|300765347|ref|ZP_07075330.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes FSL
N1-017]
gi|404280146|ref|YP_006681044.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC2755]
gi|404285957|ref|YP_006692543.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes serotype 7
str. SLCC2482]
gi|300513908|gb|EFK40972.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes FSL
N1-017]
gi|404226781|emb|CBY48186.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC2755]
gi|404244886|emb|CBY03111.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes serotype 7
str. SLCC2482]
Length = 467
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 103/225 (45%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL + K VA + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDIGERAANTRLANFI--KHDVADYDKARDFPE--LDKTSHLSRYLRTGEISIRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A + +L WR+F+ PN PI I W+ N E
Sbjct: 245 TLQETEATEGRA----TFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 YFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K D G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDSTGKFI 401
>gi|288553212|ref|YP_003425147.1| deoxyribodipyrimidine photolyase PhrB [Bacillus pseudofirmus OF4]
gi|298286845|sp|Q04449.2|PHR_BACPE RecName: Full=Deoxyribodipyrimidine photo-lyase; AltName: Full=DNA
photolyase; AltName: Full=Photoreactivating enzyme
gi|288544372|gb|ADC48255.1| Deoxyribodipyrimidine photolyase, FAD-binding PhrB [Bacillus
pseudofirmus OF4]
Length = 479
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 94 GETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTR-LFYHDL 150
GE A++RL+ +++ + A+ P +T S L SP+++ G +S+R ++YH L
Sbjct: 210 GEEHAIKRLQMFTKKRLSGYKANRDFPSITGTSRL------SPYIKTGAVSSRSIYYHIL 263
Query: 151 NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
N + + +L WR+F+ P+ ++ W + + L W
Sbjct: 264 NAE----ADSYSAETFLKELAWRDFYRMVHFYEPDCKDREIMEGYRELNWSHDQDDLTSW 319
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
+TGFP +DA M QL EGW+H+ R A FLT+ DL + W G + F+ +L+D D
Sbjct: 320 KRGETGFPIVDAGMRQLLNEGWMHNRLRMITASFLTK-DLLIDWRLGERYFERMLIDYDP 378
Query: 271 SVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
S N G W W S + +F + PV ++ D NG +I
Sbjct: 379 SSNIGGWQWAASVGTDAVPYFRIFNPVTQSKRFDENGTYI 418
>gi|2126786|pir||I39818 deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) - Bacillus firmus
(fragment)
gi|142783|gb|AAA22361.1| DNA photolyase, partial [Bacillus firmus]
Length = 339
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 94 GETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTR-LFYHDL 150
GE A++RL+ +++ + A+ P +T S L SP+++ G +S+R ++YH L
Sbjct: 70 GEEHAIKRLQMFTKKRLSGYKANRDFPSITGTSRL------SPYIKTGAVSSRSIYYHIL 123
Query: 151 NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKW 210
N + + +L WR+F+ P+ ++ W + + L W
Sbjct: 124 NAE----ADSYSAETFLKELAWRDFYRMVHFYEPDCKDREIMEGYRELNWSHDQDDLTSW 179
Query: 211 ANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADW 270
+TGFP +DA M QL EGW+H+ R A FLT+ DL + W G + F+ +L+D D
Sbjct: 180 KRGETGFPIVDAGMRQLLNEGWMHNRLRMITASFLTK-DLLIDWRLGERYFERMLIDYDP 238
Query: 271 SVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
S N G W W S + +F + PV ++ D NG +I
Sbjct: 239 SSNIGGWQWAASVGTDAVPYFRIFNPVTQSKRFDENGTYI 278
>gi|445499214|ref|ZP_21466069.1| FAD-bining deoxyribodipyrimidine photolyase PhrB [Janthinobacterium
sp. HH01]
gi|444789209|gb|ELX10757.1| FAD-bining deoxyribodipyrimidine photolyase PhrB [Janthinobacterium
sp. HH01]
Length = 490
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 102/239 (42%), Gaps = 10/239 (4%)
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
TL ELGF+ L G + A + E L R +A + + P + + LS
Sbjct: 204 TLAELGFEPSNLAELKIPTGMSGAAQLFEDFLPR---IAGYKDARDYPA--VKGPSYLSL 258
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
RFG LS R + L R +L+WREF+ NP+ P
Sbjct: 259 HFRFGTLSVRHLVRTVLDLTARGAGGEGAPVWLAELIWREFYAMILYHNPHVVGGAYKPA 318
Query: 195 CVQIPWDVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLW 251
I W+ EA A W +TG+P +DA M QL + G++H+ R ACFL + DL
Sbjct: 319 YDAIQWETGPEADELYAAWCEGRTGYPLVDAAMAQLNQTGYMHNRLRMVTACFLIK-DLG 377
Query: 252 VSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
+ W G F L D D + N G W W S S Q +F + PV K D G FI
Sbjct: 378 IDWRRGEAYFALHLNDFDLASNNGGWQWASSSGCDAQPYFRIFNPVTQSEKFDSKGKFI 436
>gi|229527954|ref|ZP_04417345.1| deoxyribodipyrimidine photolyase [Vibrio cholerae 12129(1)]
gi|229334316|gb|EEN99801.1| deoxyribodipyrimidine photolyase [Vibrio cholerae 12129(1)]
Length = 469
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|15600828|ref|NP_232458.1| deoxyribodipyrimidine photolyase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121585968|ref|ZP_01675761.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae 2740-80]
gi|153820061|ref|ZP_01972728.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae NCTC 8457]
gi|227811685|ref|YP_002811695.1| deoxyribodipyrimidine photolyase [Vibrio cholerae M66-2]
gi|229506767|ref|ZP_04396276.1| deoxyribodipyrimidine photolyase [Vibrio cholerae BX 330286]
gi|229510438|ref|ZP_04399918.1| deoxyribodipyrimidine photolyase [Vibrio cholerae B33]
gi|229517431|ref|ZP_04406876.1| deoxyribodipyrimidine photolyase [Vibrio cholerae RC9]
gi|229605241|ref|YP_002875945.1| deoxyribodipyrimidine photolyase [Vibrio cholerae MJ-1236]
gi|254850324|ref|ZP_05239674.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae MO10]
gi|255746116|ref|ZP_05420063.1| deoxyribodipyrimidine photolyase [Vibrio cholera CIRS 101]
gi|262158603|ref|ZP_06029717.1| deoxyribodipyrimidine photolyase [Vibrio cholerae INDRE 91/1]
gi|298499922|ref|ZP_07009728.1| deoxyribodipyrimidine photolyase [Vibrio cholerae MAK 757]
gi|360038062|ref|YP_004939824.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae O1 str.
2010EL-1786]
gi|379743509|ref|YP_005334561.1| deoxyribodipyrimidine photolyase [Vibrio cholerae IEC224]
gi|417812104|ref|ZP_12458765.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-49A2]
gi|417816596|ref|ZP_12463226.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HCUF01]
gi|418329963|ref|ZP_12940997.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-06A1]
gi|418337496|ref|ZP_12946391.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-23A1]
gi|418339492|ref|ZP_12948380.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-28A1]
gi|418349168|ref|ZP_12953900.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-43A1]
gi|418353785|ref|ZP_12956510.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-61A1]
gi|419824099|ref|ZP_14347628.1| DNA photolyase family protein [Vibrio cholerae CP1033(6)]
gi|421316788|ref|ZP_15767358.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1032(5)]
gi|421319836|ref|ZP_15770394.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1038(11)]
gi|421323878|ref|ZP_15774405.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1041(14)]
gi|421326850|ref|ZP_15777368.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1042(15)]
gi|421331937|ref|ZP_15782416.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1046(19)]
gi|421335570|ref|ZP_15786033.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1048(21)]
gi|421341106|ref|ZP_15791536.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-20A2]
gi|421346109|ref|ZP_15796493.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-46A1]
gi|422885232|ref|ZP_16931672.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-40A1]
gi|422897943|ref|ZP_16935363.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-48A1]
gi|422904100|ref|ZP_16939052.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-70A1]
gi|422915375|ref|ZP_16949824.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HFU-02]
gi|422926998|ref|ZP_16960003.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-38A1]
gi|423146338|ref|ZP_17133906.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-19A1]
gi|423148099|ref|ZP_17135477.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-21A1]
gi|423151885|ref|ZP_17139116.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-22A1]
gi|423158508|ref|ZP_17145521.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-32A1]
gi|423162314|ref|ZP_17149186.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-33A2]
gi|423162508|ref|ZP_17149374.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-48B2]
gi|423732330|ref|ZP_17705627.1| DNA photolyase family protein [Vibrio cholerae HC-17A1]
gi|423736965|ref|ZP_17710078.1| DNA photolyase family protein [Vibrio cholerae HC-50A2]
gi|423900591|ref|ZP_17727949.1| DNA photolyase family protein [Vibrio cholerae HC-62A1]
gi|423912133|ref|ZP_17728649.1| DNA photolyase family protein [Vibrio cholerae HC-77A1]
gi|423999959|ref|ZP_17743116.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-17A2]
gi|424004591|ref|ZP_17747596.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-37A1]
gi|424021751|ref|ZP_17761460.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-62B1]
gi|424028401|ref|ZP_17767998.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-69A1]
gi|424587687|ref|ZP_18027259.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1030(3)]
gi|424592498|ref|ZP_18031913.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1040(13)]
gi|424596361|ref|ZP_18035668.1| deoxyribodipyrimidine photo-lyase [Vibrio Cholerae CP1044(17)]
gi|424603214|ref|ZP_18042348.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1047(20)]
gi|424605046|ref|ZP_18044033.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1050(23)]
gi|424607951|ref|ZP_18046885.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-39A1]
gi|424614591|ref|ZP_18053371.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-41A1]
gi|424617076|ref|ZP_18055761.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-42A1]
gi|424620972|ref|ZP_18059501.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-47A1]
gi|424643041|ref|ZP_18080819.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-56A2]
gi|424650106|ref|ZP_18087709.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-57A2]
gi|424654938|ref|ZP_18092256.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-81A2]
gi|440711204|ref|ZP_20891845.1| deoxyribodipyrimidine photolyase [Vibrio cholerae 4260B]
gi|443505134|ref|ZP_21072075.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-64A1]
gi|443509033|ref|ZP_21075783.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-65A1]
gi|443512877|ref|ZP_21079500.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-67A1]
gi|443516423|ref|ZP_21082923.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-68A1]
gi|443521124|ref|ZP_21087454.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-71A1]
gi|443521284|ref|ZP_21087606.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-72A2]
gi|443530056|ref|ZP_21096073.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-7A1]
gi|443532706|ref|ZP_21098709.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-80A1]
gi|443537421|ref|ZP_21103279.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-81A1]
gi|449057517|ref|ZP_21735813.1| Deoxyribodipyrimidine photolyase [Vibrio cholerae O1 str. Inaba
G4222]
gi|81858027|sp|Q9KNA8.1|PHR_VIBCH RecName: Full=Deoxyribodipyrimidine photo-lyase; AltName: Full=DNA
photolyase; AltName: Full=Photoreactivating enzyme
gi|9657440|gb|AAF95971.1| deoxyribodipyrimidine photolyase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549904|gb|EAX59924.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae 2740-80]
gi|126509396|gb|EAZ71990.1| deoxyribodipyrimidine photolyase, cyclobutane pyrimidine
dimer-specific [Vibrio cholerae NCTC 8457]
gi|227010827|gb|ACP07038.1| deoxyribodipyrimidine photolyase [Vibrio cholerae M66-2]
gi|229345467|gb|EEO10440.1| deoxyribodipyrimidine photolyase [Vibrio cholerae RC9]
gi|229352883|gb|EEO17823.1| deoxyribodipyrimidine photolyase [Vibrio cholerae B33]
gi|229357118|gb|EEO22036.1| deoxyribodipyrimidine photolyase [Vibrio cholerae BX 330286]
gi|229371727|gb|ACQ62149.1| deoxyribodipyrimidine photolyase [Vibrio cholerae MJ-1236]
gi|254846029|gb|EET24443.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae MO10]
gi|255735870|gb|EET91268.1| deoxyribodipyrimidine photolyase [Vibrio cholera CIRS 101]
gi|262029483|gb|EEY48133.1| deoxyribodipyrimidine photolyase [Vibrio cholerae INDRE 91/1]
gi|297541903|gb|EFH77954.1| deoxyribodipyrimidine photolyase [Vibrio cholerae MAK 757]
gi|340039746|gb|EGR00719.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HCUF01]
gi|340044924|gb|EGR05872.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-49A2]
gi|341630144|gb|EGS55247.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-70A1]
gi|341631059|gb|EGS56000.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-40A1]
gi|341631141|gb|EGS56081.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-48A1]
gi|341631864|gb|EGS56740.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HFU-02]
gi|341645075|gb|EGS69231.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-38A1]
gi|356421241|gb|EHH74744.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-19A1]
gi|356424231|gb|EHH77646.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-21A1]
gi|356426470|gb|EHH79778.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-06A1]
gi|356430880|gb|EHH84085.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-23A1]
gi|356434968|gb|EHH88128.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-32A1]
gi|356436434|gb|EHH89548.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-22A1]
gi|356440411|gb|EHH93352.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-33A2]
gi|356442892|gb|EHH95725.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-28A1]
gi|356446030|gb|EHH98830.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-43A1]
gi|356454850|gb|EHI07497.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-61A1]
gi|356457717|gb|EHI10224.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-48B2]
gi|356649216|gb|AET29270.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae O1 str.
2010EL-1786]
gi|378796103|gb|AFC59573.1| deoxyribodipyrimidine photolyase [Vibrio cholerae IEC224]
gi|395919246|gb|EJH30069.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1032(5)]
gi|395921892|gb|EJH32711.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1041(14)]
gi|395924724|gb|EJH35526.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1038(11)]
gi|395930735|gb|EJH41481.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1046(19)]
gi|395933775|gb|EJH44514.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1042(15)]
gi|395935252|gb|EJH45987.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1048(21)]
gi|395938590|gb|EJH49282.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-20A2]
gi|395947636|gb|EJH58291.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-46A1]
gi|395964476|gb|EJH74693.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-42A1]
gi|395966295|gb|EJH76422.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-56A2]
gi|395969260|gb|EJH79147.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-57A2]
gi|395971527|gb|EJH81187.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1030(3)]
gi|395973176|gb|EJH82746.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1047(20)]
gi|395975239|gb|EJH84735.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-47A1]
gi|408009783|gb|EKG47676.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-41A1]
gi|408015828|gb|EKG53399.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-39A1]
gi|408043105|gb|EKG79126.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1040(13)]
gi|408048055|gb|EKG83526.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae CP1050(23)]
gi|408049864|gb|EKG85052.1| deoxyribodipyrimidine photo-lyase [Vibrio Cholerae CP1044(17)]
gi|408058760|gb|EKG93545.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-81A2]
gi|408613762|gb|EKK87048.1| DNA photolyase family protein [Vibrio cholerae CP1033(6)]
gi|408620829|gb|EKK93833.1| DNA photolyase family protein [Vibrio cholerae HC-17A1]
gi|408652134|gb|EKL23366.1| DNA photolyase family protein [Vibrio cholerae HC-50A2]
gi|408653028|gb|EKL24205.1| DNA photolyase family protein [Vibrio cholerae HC-62A1]
gi|408664204|gb|EKL35043.1| DNA photolyase family protein [Vibrio cholerae HC-77A1]
gi|408850645|gb|EKL90594.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-37A1]
gi|408854708|gb|EKL94456.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-17A2]
gi|408877826|gb|EKM16851.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-69A1]
gi|408880773|gb|EKM19691.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-62B1]
gi|439972691|gb|ELP48934.1| deoxyribodipyrimidine photolyase [Vibrio cholerae 4260B]
gi|443430432|gb|ELS73001.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-64A1]
gi|443434270|gb|ELS80427.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-65A1]
gi|443438064|gb|ELS87794.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-67A1]
gi|443442174|gb|ELS95487.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-68A1]
gi|443445153|gb|ELT01875.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-71A1]
gi|443452607|gb|ELT12789.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-72A2]
gi|443459626|gb|ELT27020.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-7A1]
gi|443464052|gb|ELT35000.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-80A1]
gi|443467430|gb|ELT42086.1| deoxyribodipyrimidine photo-lyase [Vibrio cholerae HC-81A1]
gi|448263228|gb|EMB00475.1| Deoxyribodipyrimidine photolyase [Vibrio cholerae O1 str. Inaba
G4222]
Length = 469
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|333899133|ref|YP_004473006.1| deoxyribodipyrimidine photo-lyase [Pseudomonas fulva 12-X]
gi|333114398|gb|AEF20912.1| Deoxyribodipyrimidine photo-lyase [Pseudomonas fulva 12-X]
Length = 483
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 106/235 (45%), Gaps = 10/235 (4%)
Query: 80 GFDI-EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
GFD L W GE A RL+R + W+ + + P SQ LS +L
Sbjct: 191 GFDTPSQALRDAWPAGEDAARERLQRFADE--WIEDYHDNRDFPIRPGTSQ--LSAYLAA 246
Query: 139 GCLSTRLFYHD-LNKLYKRIKKAPP-PLSLHGQLLWREFFYCAATRNPNFDRMLG-NPIC 195
G LS R H LN + ++ +L+WREF+ P+ P
Sbjct: 247 GVLSPRQCLHAALNANGGEFENGNQGAVTWINELIWREFYAHILVGYPHVSMARAFRPET 306
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
+PW + L W +TG P IDA M QL E GW+H+ R VA FLT+ +L + W
Sbjct: 307 EALPWRNAAKDLQAWQEGRTGIPIIDAAMRQLLETGWMHNRLRMVVAMFLTK-NLLIDWR 365
Query: 256 EGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
EG + F L+D D + N G W W S + +F + P+ ++ DP+G FI
Sbjct: 366 EGERFFMRHLIDGDLAANNGGWQWSASTGTDSVPYFRIFNPISQSQRFDPDGRFI 420
>gi|330448252|ref|ZP_08311900.1| deoxyribodipyrimidine photolyase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492443|dbj|GAA06397.1| deoxyribodipyrimidine photolyase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 489
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 114/240 (47%), Gaps = 14/240 (5%)
Query: 76 LEELGFD-IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
++ LG+ IE +L W E ++RL+ KA + + + P + + LSP
Sbjct: 200 IQSLGYPVIESVL---WPVDEEAILQRLDTFCVTKA--QDYHQQRDFPA--IDGTSCLSP 252
Query: 135 FLRFGCLSTRLFYHDLNKLYKR---IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
FL G LS R + L + + + K + +++WREF+ R P +
Sbjct: 253 FLAIGALSARQCVYQLLQHFPHALEVNKEDGAFTWLNEIIWREFYGHLLHRYPELSKNHP 312
Query: 192 NPICVQ-IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDL 250
Q + W N L W + +TGFP +DA M QLR GW+H+ R A FLT+ DL
Sbjct: 313 FQDYTQYVRWQDNPILLKAWQDGKTGFPIVDAAMRQLRATGWMHNRLRMITASFLTK-DL 371
Query: 251 WVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G + F + L+D D++ N G W W S + Q +F + P G++ DP GDFI
Sbjct: 372 LCDWRAGEQWFMQHLIDGDFASNNGGWQWAASTGTDSQPYFRIFNPTLQGQRFDPKGDFI 431
>gi|229030832|ref|ZP_04186854.1| Deoxyribodipyrimidine photolyase [Bacillus cereus AH1271]
gi|228730481|gb|EEL81439.1| Deoxyribodipyrimidine photolyase [Bacillus cereus AH1271]
Length = 476
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 113/235 (48%), Gaps = 21/235 (8%)
Query: 83 IEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGC 140
IE + PT +G A + ++ K S GR P S+LA P+L FG
Sbjct: 193 IESMWEPTEEG----AYKTCKKFFSSKLASYSEGRDFPNENAHSMLA------PYLSFGQ 242
Query: 141 LSTRLFYHDL-NKLYKR----IKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
+S R YH L NK +R +K S Q +WREF Y P N
Sbjct: 243 ISVRWMYHYLINKSTERQCSLFEKQVN--SFIRQFIWREFSYYLLYHYPFTVYKPLNKSF 300
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
PW+ E L W TG+P+IDA M +L + G++H+ AR AVA FL + L + W+
Sbjct: 301 EHFPWNNEEELLTVWQKGDTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQ 359
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
EG K F + LLDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 360 EGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 414
>gi|353238551|emb|CCA70494.1| related to deoxyribodipyrimidine photo-lyase PHR [Piriformospora
indica DSM 11827]
Length = 585
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 13/191 (6%)
Query: 128 SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG-----QLLWREFFYCAATR 182
S + +SP+L G +S R + K ++ + K G ++ WR+F+ +
Sbjct: 343 SSSRMSPYLSAGVISARELIRETMK-FQGVNKINMERDNGGGMWVSEIGWRDFYSHVLSA 401
Query: 183 NPNFDRMLGNPI---CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
P+ +G P I W+ + W N TG+P +DA M QL+ GW+H+ R
Sbjct: 402 FPHVS--MGRPFQEKYADIKWETDESVFEAWKNGMTGYPIVDATMRQLKAHGWVHNRTRM 459
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFF-QQFFHCYCPVKF 298
VA FLT+ DL + W G K F + L+D D + N G W W + + Q +F + P+
Sbjct: 460 IVAMFLTK-DLMMDWRLGEKWFMQQLIDGDLANNNGGWQWSASTGVDPQPYFRIFNPILQ 518
Query: 299 GRKADPNGDFI 309
KADP+GDFI
Sbjct: 519 SEKADPSGDFI 529
>gi|330991596|ref|ZP_08315547.1| Cryptochrome-2 [Gluconacetobacter sp. SXCC-1]
gi|329761615|gb|EGG78108.1| Cryptochrome-2 [Gluconacetobacter sp. SXCC-1]
Length = 465
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 14/244 (5%)
Query: 72 GVPTLEELGF-----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLL 126
G+ +L LG D L TW+ GE A RL + + + + R + P
Sbjct: 181 GLVSLSALGLQPTRPDWAQGLRDTWQPGEQAAHARLATFMATR--LPGYARLRDLPAR-- 236
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF 186
+ +GLSP LRFG +S R +H + + ++ WR+F + P+
Sbjct: 237 PATSGLSPCLRFGHISPRQIWHAVEAQGDVDADG---MCFLSEVGWRDFAHATLFDCPDM 293
Query: 187 DRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
P ++PW + L W +TG+P +DA M +L GW+H+ R VA FLT
Sbjct: 294 ATRSLRPEYDRMPWRTDPAGLRAWQQGRTGYPIVDAGMRELWHTGWMHNRVRMIVASFLT 353
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPN 305
+ L + W G + F + L+DAD + N W W++ C +F + PV G K DP
Sbjct: 354 K-HLLLDWRAGERWFADTLVDADGASNPFNWQWVAGCGLDAAPYFRIFNPVLQGEKFDPE 412
Query: 306 GDFI 309
GD++
Sbjct: 413 GDYV 416
>gi|47093329|ref|ZP_00231098.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes str. 4b
H7858]
gi|226223217|ref|YP_002757324.1| DNA photolyase [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|386731355|ref|YP_006204851.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes 07PF0776]
gi|405754672|ref|YP_006678136.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC2540]
gi|406703371|ref|YP_006753725.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes L312]
gi|417314672|ref|ZP_12101366.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes J1816]
gi|47018298|gb|EAL09062.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes serotype
4b str. H7858]
gi|225875679|emb|CAS04382.1| Putative DNA photolyase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|328467416|gb|EGF38492.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes J1816]
gi|384390113|gb|AFH79183.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes 07PF0776]
gi|404223872|emb|CBY75234.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes SLCC2540]
gi|406360401|emb|CBY66674.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes L312]
Length = 467
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 103/225 (45%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL + K VA + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDIGERAANTRLANFI--KHDVADYDKARDFPE--LDKTSHLSRYLRTGEISIRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A + +L WR+F+ PN PI I W+ N E
Sbjct: 245 TLQETEATEGRA----TFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 YFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K D G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDSTGKFI 401
>gi|254824139|ref|ZP_05229140.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes FSL
J1-194]
gi|254932137|ref|ZP_05265496.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes HPB2262]
gi|255521880|ref|ZP_05389117.1| DNA photolyase [Listeria monocytogenes FSL J1-175]
gi|405748953|ref|YP_006672419.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes ATCC
19117]
gi|417316860|ref|ZP_12103492.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes J1-220]
gi|424822329|ref|ZP_18247342.1| Deoxyribodipyrimidine photolyase [Listeria monocytogenes str. Scott
A]
gi|293583693|gb|EFF95725.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes HPB2262]
gi|293593371|gb|EFG01132.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes FSL
J1-194]
gi|328475764|gb|EGF46505.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes J1-220]
gi|332311009|gb|EGJ24104.1| Deoxyribodipyrimidine photolyase [Listeria monocytogenes str. Scott
A]
gi|404218153|emb|CBY69517.1| deoxyribodipyrimidine photolyase [Listeria monocytogenes ATCC
19117]
Length = 467
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 103/225 (45%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL + K VA + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDIGERAANTRLANFI--KHDVADYDKARDFPE--LDKTSHLSRYLRTGEISIRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A + +L WR+F+ PN PI I W+ N E
Sbjct: 245 TLQETEATEGRA----TFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 YFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K D G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDSTGKFI 401
>gi|229526306|ref|ZP_04415710.1| deoxyribodipyrimidine photolyase [Vibrio cholerae bv. albensis
VL426]
gi|229336464|gb|EEO01482.1| deoxyribodipyrimidine photolyase [Vibrio cholerae bv. albensis
VL426]
Length = 469
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 130 TGLSPFLRFGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPN 185
+ LSP+L G LS R YH+ + + + + A LS +L+WREF+ PN
Sbjct: 237 SSLSPYLAIGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPN 292
Query: 186 FDRMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ ++ W + E W +TG+P +DA M QL + GW+H+ R VA F
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKAD 303
LT+ DL + W G + F L+D D++ N G W W + + Q +F + PV G K D
Sbjct: 353 LTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 412 PNGDFI 417
>gi|389573401|ref|ZP_10163476.1| deoxyribodipyrimidine photo-lyase [Bacillus sp. M 2-6]
gi|388427098|gb|EIL84908.1| deoxyribodipyrimidine photo-lyase [Bacillus sp. M 2-6]
Length = 477
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 101 RLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA 160
RL R+ E++ + FG K LS FL+ G +S R +H +N+ + + +
Sbjct: 222 RLTRYHEKRDIPSVFGTSK------------LSRFLKTGTISIRTIFHAVNE--EELFED 267
Query: 161 PPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWI 220
+ +L WR+F++ P N I W+ + W QTGFP +
Sbjct: 268 EGKETFIKELAWRDFYHMIFAHYPEMKEKEINSSFQHIKWNDDETLFEAWCKGQTGFPLV 327
Query: 221 DAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW- 279
DA M QL EEGW+H+ R A FLT+ D ++ W +G F L+D D + N G + W
Sbjct: 328 DAGMRQLNEEGWMHNRLRMVTASFLTK-DYFIDWRKGEAYFARKLVDYDEASNIGGFQWA 386
Query: 280 LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
S + +F + P ++ DP+G++I
Sbjct: 387 ASVGTDAVPYFRIFNPTTQSKRFDPSGEYI 416
>gi|90577743|ref|ZP_01233554.1| deoxyribodipyrimidine photolyase [Photobacterium angustum S14]
gi|90440829|gb|EAS66009.1| deoxyribodipyrimidine photolyase [Photobacterium angustum S14]
Length = 489
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 104/226 (46%), Gaps = 14/226 (6%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTR-----L 145
W E +RLE E KA ++ + + P + + LSP+L G LS R L
Sbjct: 213 WPVDEETIAQRLETFFETKA--ETYHQNRDFPA--IDGTSCLSPYLAIGALSARQCLYQL 268
Query: 146 FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNM 204
H N L I K + +++WREF+ R P + + W +
Sbjct: 269 LQHFPNAL--EINKDDGAFTWLNEIVWREFYGHLLHRYPELSQYQPFQKFTRFVQWKDDA 326
Query: 205 EALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDEL 264
L W +TGFP +DA M QLR GW+H+ R A FLT+ DL W G + F +
Sbjct: 327 VLLKAWQEGKTGFPIVDAAMRQLRSTGWMHNRLRMITASFLTK-DLLCDWRVGEQWFMQH 385
Query: 265 LLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
L+D D++ N G W W S + Q +F + P G++ DP GDFI
Sbjct: 386 LIDGDFASNNGGWQWAASTGTDAQPYFRVFNPTLQGQRFDPKGDFI 431
>gi|333898405|ref|YP_004472278.1| DASH family cryptochrome [Pseudomonas fulva 12-X]
gi|333113670|gb|AEF20184.1| cryptochrome, DASH family [Pseudomonas fulva 12-X]
Length = 472
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 135/295 (45%), Gaps = 26/295 (8%)
Query: 26 KTPLTYHQFQSIV-AKMDSPSPAEAPVTPLLVRQATTPLRDDHD-EKYGVPTLEELGF-D 82
+ P Y QF++++ A+ P AP PL + D YG+PT +LG D
Sbjct: 144 QLPTVYSQFRTLIDARQYVFQPQSAP-------DQLPPLPEGLDINAYGLPTQSQLGLGD 196
Query: 83 IEGLLPPTW--KGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRF 138
L+P + GGET A+ RL +L V ++ K T ++ S+ + SP+L
Sbjct: 197 ALSLVPSAFPFSGGETAALARLRDYLWDSQNVRTY---KQTRNGMIGSEYSSKFSPWLAN 253
Query: 139 GCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP----I 194
G LS R +L + L +LLWREFF C R + + L P
Sbjct: 254 GSLSPRRAAAELRRHESLYGANESTYWLWAELLWREFFRCTLQR---YGQALFEPGGLKA 310
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
+ P ++ E +WA+ +TG P +DA M +L G++ + R VA +L DL W
Sbjct: 311 TERAPQQID-ERFEQWAHGRTGMPLVDANMRELAATGYMSNRGRQVVASYLV-SDLQQDW 368
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G F+E L+D D + N G W +L+ + + +K R+ DP G+++
Sbjct: 369 RHGAAWFEEHLIDYDPASNWGNWAYLAGVGSDPRLKRTFNALKQARQYDPQGEYV 423
>gi|254991721|ref|ZP_05273911.1| DNA photolyase [Listeria monocytogenes FSL J2-064]
Length = 467
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 103/225 (45%), Gaps = 16/225 (7%)
Query: 89 PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
P GE A RL + K VA + + + P+ L + LS +LR G +S R +
Sbjct: 189 PILDIGERAANTRLANFI--KHDVADYDKARDFPE--LDKTSHLSRYLRTGEISIRTIWQ 244
Query: 149 DLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
L + +A + +L WR+F+ PN PI I W+ N E
Sbjct: 245 SLQETEATEGRA----TFEKELCWRDFYNMIYVSFPN---QKNEPIQENYRFIEWENNRE 297
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W +TGFP +DA M QL+E GW+H+ R A FLT+ DL + W G K F ++L
Sbjct: 298 FFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMITASFLTK-DLLIDWRFGEKYFQQML 356
Query: 266 LDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
+D D + N G W W S + +F + P +K D G FI
Sbjct: 357 IDYDPASNIGGWQWAASTGTDSVPYFRIFNPTTQSQKFDSTGKFI 401
>gi|388567569|ref|ZP_10154000.1| deoxyribodipyrimidine photo-lyase [Hydrogenophaga sp. PBC]
gi|388265174|gb|EIK90733.1| deoxyribodipyrimidine photo-lyase [Hydrogenophaga sp. PBC]
Length = 496
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 12/241 (4%)
Query: 73 VPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
VPTL E+GF+ L GE A + + L+R + + + P + + L
Sbjct: 197 VPTLAEIGFERTNLAQLPLPTGEDGAHQLFDDFLQR---IDRYDEARDYPA--IKGPSYL 251
Query: 133 SPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGN 192
S LRFG +S R ++L+ + P + +L+WR+F++ + P+ +
Sbjct: 252 SAHLRFGTVSIRALASIAHELHA--QGNPGASTWLSELIWRDFYHQILSNFPHVAQSAFK 309
Query: 193 PICVQIPWDVNMEALA---KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
P + ++ A A W +TG+P +DA M Q+ + G++H+ R VA FL + D
Sbjct: 310 PAYDAVRYEHGKAADALFKAWCEGRTGYPLVDAAMAQINQTGYMHNRLRMVVASFLVK-D 368
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDF 308
L + W+ G + F E L+D D + N G W W S S Q +F + PV + DP G F
Sbjct: 369 LGIHWQWGERYFAEHLIDYDLAANNGGWQWASSSGCDAQPWFRIFNPVTQSERFDPQGRF 428
Query: 309 I 309
I
Sbjct: 429 I 429
>gi|83594235|ref|YP_427987.1| deoxyribodipyrimidine photo-lyase type I [Rhodospirillum rubrum
ATCC 11170]
gi|386350987|ref|YP_006049235.1| deoxyribodipyrimidine photo-lyase type I [Rhodospirillum rubrum
F11]
gi|83577149|gb|ABC23700.1| Deoxyribodipyrimidine photo-lyase type I [Rhodospirillum rubrum
ATCC 11170]
gi|346719423|gb|AEO49438.1| deoxyribodipyrimidine photo-lyase type I [Rhodospirillum rubrum
F11]
Length = 478
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 19/242 (7%)
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LE D G L TW+ GE A RLE VA + + P L S+ LSP
Sbjct: 189 SLEPTTPDWAGGLRDTWQPGEAGAQARLEAFFNGP--VADYASGRDRPDKPLTSK--LSP 244
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG---QLLWREFFYCAATRNPNFDRMLG 191
LRFG +S R +++ + PP + +L WREF + + P
Sbjct: 245 HLRFGEISPR-------QVWTAARHHPPGGGMDAFLRELGWREFCHHLLFQAPTMAEEPL 297
Query: 192 NPICVQIPWDVNME---ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+ PW E ALA W + +TG+P +DA M +L GW+H+ R A FL +
Sbjct: 298 KAEFLAFPWTEAKEIGPALAAWQSGETGYPIVDAGMRELWHTGWMHNRVRMIAASFLIK- 356
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W+ G + F + L+DA + NA W W++ C + FF + PV G + DP G
Sbjct: 357 DLLIPWQHGERWFWDTLVDACPANNAAGWQWVAGCGADAAPFFRIFNPVTQGERFDPEGA 416
Query: 308 FI 309
++
Sbjct: 417 YV 418
>gi|284989430|ref|YP_003407984.1| Deoxyribodipyrimidine photo-lyase [Geodermatophilus obscurus DSM
43160]
gi|284062675|gb|ADB73613.1| Deoxyribodipyrimidine photo-lyase [Geodermatophilus obscurus DSM
43160]
Length = 454
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 17/227 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLF 146
LPP + ++A RR R + + + TP S S+ LS +L++GC+ R
Sbjct: 188 LPPAGEAAASDAWRRF-----RAERLEGYKSTRNTPGSDGTSR--LSAYLKYGCVHPRTL 240
Query: 147 YHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEA 206
DL L S +L WR+F+ P R + + +D +A
Sbjct: 241 LADLEDLDSDSAD-----SFRNELAWRDFYADVLWHRPESAREPLDERMHAMAYDTGPDA 295
Query: 207 ---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDE 263
A WA +TG+P +DA M QL E ++H+ R +A FL + DL V W G + F +
Sbjct: 296 DERFAAWARGRTGYPIVDAGMRQLLGEAYVHNRVRMIIASFLVK-DLHVDWRRGARYFMQ 354
Query: 264 LLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
L+D D + N W W++ + + ++ + P + GR+ DP+GD++
Sbjct: 355 HLVDGDLASNNHGWQWVAGTGTDASPYYRVFNPTRQGREFDPDGDYV 401
>gi|242786746|ref|XP_002480866.1| deoxyribodipyrimidine photo-lyase Phr1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218721013|gb|EED20432.1| deoxyribodipyrimidine photo-lyase Phr1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 593
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 105/222 (47%), Gaps = 13/222 (5%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFY---HDL 150
GE EA +RL+ + + S R + Q LSP+L G LS R D
Sbjct: 319 GEQEARKRLDEFITTRVKEYSKKRSMVDGQYTAI----LSPYLASGVLSARTAVSKAKDA 374
Query: 151 NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG--NPICVQIPWDVNMEALA 208
N Y K A S ++ WR+F+ P F M P + W+ + +
Sbjct: 375 NGGYLDGKNASL-ASWISEVAWRDFYKHVLVHWP-FICMNKCFKPEFTNVTWEYDTDLFT 432
Query: 209 KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDA 268
+W QTG+P +DA M QLR + W+H+ R V+ FL++ DL + W G + F E L+D
Sbjct: 433 RWTEGQTGYPIVDAAMRQLRHDAWLHNRNRMIVSSFLSK-DLMIDWRRGERYFMETLIDG 491
Query: 269 DWSVNAGMWMWLSCSSFF-QQFFHCYCPVKFGRKADPNGDFI 309
D++ N G W + S + Q +F + P+ K DPNGDFI
Sbjct: 492 DFASNHGGWGFGSSTGVDPQPYFRIFNPLLQSEKFDPNGDFI 533
>gi|167521638|ref|XP_001745157.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776115|gb|EDQ89735.1| predicted protein [Monosiga brevicollis MX1]
Length = 525
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 132/282 (46%), Gaps = 15/282 (5%)
Query: 36 SIVAKMDSPSPAEAPVTPLLVRQAT-TPLRDDHDEKYGVPTLEEL-----GFDIEGLLPP 89
S+ + A+ V P++ A PL D E +PT+E+L D +LP
Sbjct: 165 SVFTQFRKRVEADMHVRPVVAAPARLAPLPSDL-ELGSIPTVEDLCPGQHEPDERAVLP- 222
Query: 90 TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFGCLSTRLFY 147
+KGGET A RL+ +L +AS+ K T L+ + SP+L G L+ R Y
Sbjct: 223 -FKGGETAARARLQYYLWESNLLASY---KDTRNGLVGGDYSSKFSPWLAHGNLTARWIY 278
Query: 148 HDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEAL 207
H++ + + + L +LLWR++F A ++ G +PW +
Sbjct: 279 HEVKRYEQERTENTSTYWLIFELLWRDYFRFVALQHGTAIFKPGGVQHKDVPWRHSPADF 338
Query: 208 AKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLD 267
W N QTGFP+IDA M +L + G++ + R VA FLT+ DL + W G + F+ LLLD
Sbjct: 339 EAWQNGQTGFPFIDANMRELAKTGFMSNRGRQNVASFLTK-DLQIDWRLGAEWFETLLLD 397
Query: 268 ADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
D N G W + + + + +K + DP +++
Sbjct: 398 HDPCSNYGNWNYAAGVGNDPRQGRHFNVIKQAKTYDPTAEYV 439
>gi|242786742|ref|XP_002480865.1| deoxyribodipyrimidine photo-lyase Phr1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218721012|gb|EED20431.1| deoxyribodipyrimidine photo-lyase Phr1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 771
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 105/222 (47%), Gaps = 13/222 (5%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFY---HDL 150
GE EA +RL+ + + S R + Q LSP+L G LS R D
Sbjct: 497 GEQEARKRLDEFITTRVKEYSKKRSMVDGQYTAI----LSPYLASGVLSARTAVSKAKDA 552
Query: 151 NKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG--NPICVQIPWDVNMEALA 208
N Y K A S ++ WR+F+ P F M P + W+ + +
Sbjct: 553 NGGYLDGKNASL-ASWISEVAWRDFYKHVLVHWP-FICMNKCFKPEFTNVTWEYDTDLFT 610
Query: 209 KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDA 268
+W QTG+P +DA M QLR + W+H+ R V+ FL++ DL + W G + F E L+D
Sbjct: 611 RWTEGQTGYPIVDAAMRQLRHDAWLHNRNRMIVSSFLSK-DLMIDWRRGERYFMETLIDG 669
Query: 269 DWSVNAGMWMWLSCSSFF-QQFFHCYCPVKFGRKADPNGDFI 309
D++ N G W + S + Q +F + P+ K DPNGDFI
Sbjct: 670 DFASNHGGWGFGSSTGVDPQPYFRIFNPLLQSEKFDPNGDFI 711
>gi|222148397|ref|YP_002549354.1| DNA photolyase [Agrobacterium vitis S4]
gi|221735385|gb|ACM36348.1| DNA photolyase [Agrobacterium vitis S4]
Length = 483
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 127/291 (43%), Gaps = 15/291 (5%)
Query: 22 KNGGKTPLTYHQ--FQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEEL 79
K G P + ++++ + D P P E P T L A P D ++ +PT +
Sbjct: 143 KTGSGGPFRVYTPFWRALEKQGDPPPPVERPKT--LHNPAHWPDSDRLEDWQLLPTKPDW 200
Query: 80 GFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFG 139
+ + W GE A +L + ++ + + + P L +GLSP L G
Sbjct: 201 AKEFSEI----WTPGEPGAQDKLSQFIDHG--LKGYRTQRDFPA--LPHTSGLSPHLALG 252
Query: 140 CLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
+S +H L + + +L+WREF Y + N P
Sbjct: 253 EISPARIWHATIGLGDDVSTDDY-VHFRKELVWREFSYHLLFHFADLASQNWNDRFNDFP 311
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W N E L+ W QTG+P +DA M QL G +H+ R VA FL + DL + W EG
Sbjct: 312 WKKNAEFLSAWQRGQTGYPIVDAGMRQLWRHGVMHNRVRMIVASFLIK-DLMIDWREGEA 370
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F L+DAD + NA W W++ S + FF + P+ K DP+GD+I
Sbjct: 371 WFRYTLVDADPASNAASWQWVAGSGADASPFFRIFNPITQSEKFDPDGDYI 421
>gi|189184449|ref|YP_001938234.1| deoxyribodipyrimidine photolyase, DNA photolyase [Orientia
tsutsugamushi str. Ikeda]
gi|189181220|dbj|BAG41000.1| deoxyribodipyrimidine photolyase, DNA photolyase [Orientia
tsutsugamushi str. Ikeda]
Length = 505
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 117 RPKMTPQSLL--ASQTGLSPFLRFGCLSTRLFYH-----DLNKLY--KRIKKAPPPLSLH 167
R T Q+LL + + +SP+LRFG +S R + D L + I K
Sbjct: 242 RTNNTNQNLLYLNNSSTISPYLRFGLVSIRECFSKAIAADSKALITDEAIGKTEKEKGWI 301
Query: 168 GQLLWREFFYCAATRNPN-FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQ 226
L+ REF+ R PN + IPW+ ++E K+ +TG+P IDA + Q
Sbjct: 302 DGLIHREFYASLLFRFPNTVSEEFQDKYRNNIPWEKDLEIYCKFTEGKTGYPMIDASIKQ 361
Query: 227 LREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSF 285
L +GW+H+LAR VA F T+ L + W G F + L+D + + N G W W SC +
Sbjct: 362 LLRDGWMHNLARTIVANFFTKY-LLLDWRLGEHFFSQYLMDYELASNVGSWQWAASCGTD 420
Query: 286 FQQFFHCYCPVKFGRKADPNGDFI 309
+ F +CP GRK D +I
Sbjct: 421 MEHFVRMFCPFAQGRKFDHEAKYI 444
>gi|220913214|ref|YP_002488523.1| deoxyribodipyrimidine photo-lyase [Arthrobacter chlorophenolicus
A6]
gi|219860092|gb|ACL40434.1| Deoxyribodipyrimidine photo-lyase [Arthrobacter chlorophenolicus
A6]
Length = 475
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 119/249 (47%), Gaps = 18/249 (7%)
Query: 72 GVPTLEELGF--------DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
G+P + LG D G L TW GE A+ RL L+ + +G + P
Sbjct: 184 GLPASDSLGSWKLLPTSPDWSGGLAETWVPGEKGAVDRLTDFLDGP--IEDYGTGRNIPG 241
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL-HGQLLWREFFYCAATR 182
+ S+ LSP+LRFG +S + ++ + + R + P + + +L WREF +
Sbjct: 242 TEGTSR--LSPYLRFGEVSPFRVWREIRRRHPR--QVPADVGIFRSELGWREFNWHLLYH 297
Query: 183 NPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
NP P + W ++ + LA W +TG+P +DA M QL + GW+H+ R A
Sbjct: 298 NPELATRSFRPDFEKFEWASLSRKELAAWQQGRTGYPLVDAGMRQLWQTGWMHNRVRMAA 357
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF-FQQFFHCYCPVKFGR 300
A FL + +L W G + F + L+DAD + N W W++ S ++ + PV +
Sbjct: 358 ASFLVK-NLLTDWRVGEQWFWDTLVDADAANNPANWQWVAGSGADASPYYRIFNPVTQSK 416
Query: 301 KADPNGDFI 309
K D GD++
Sbjct: 417 KFDAGGDYL 425
>gi|134100631|ref|YP_001106292.1| deoxyribodipyrimidine photolyase [Saccharopolyspora erythraea NRRL
2338]
gi|291006735|ref|ZP_06564708.1| deoxyribodipyrimidine photo-lyase [Saccharopolyspora erythraea NRRL
2338]
gi|133913254|emb|CAM03367.1| putative deoxyribodipyrimidine photolyase [Saccharopolyspora
erythraea NRRL 2338]
Length = 448
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 101/222 (45%), Gaps = 18/222 (8%)
Query: 90 TWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFGCLSTRLFY 147
TW GGETE RR +R W+ R LA+ + LSP+L FGCLS R
Sbjct: 192 TWPGGETEGRRRADR------WLGGGVRAYHERHDDLAADATSQLSPYLHFGCLSAR--- 242
Query: 148 HDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEAL 207
+L R + P + QL WR+F + P P + W + +AL
Sbjct: 243 ----ELADRAGRGEGPEAFVRQLAWRDFHHQVLAARPEAVHEDYRPRGDR--WHRDADAL 296
Query: 208 AKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLD 267
W +TG P +DA M QL E GW+H+ AR FLT+ L++ W G F + L+D
Sbjct: 297 RAWKQGRTGVPIVDAGMRQLLELGWMHNRARLITGSFLTKS-LYLDWRAGAWHFFDHLVD 355
Query: 268 ADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
D + N W W++ + + P++ + D GD++
Sbjct: 356 GDIANNCLNWQWVAGTGTDTRPNRVLNPLRQADRYDAGGDYV 397
>gi|393759561|ref|ZP_10348374.1| deoxyribodipyrimidine photo-lyase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162122|gb|EJC62183.1| deoxyribodipyrimidine photo-lyase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 514
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 114/251 (45%), Gaps = 36/251 (14%)
Query: 72 GVPTLEELGFDIEG----LLPPTWKGGETEAMR---RLERHLERKAWVASFGRPKMTPQS 124
+P L+ELGF E L P W+G +T + R+ + ER+ + A G
Sbjct: 225 ALPCLKELGFHEEARTKLLSPAGWQGAQTLLQQFEPRIHAYHERRDFPAKRGV------- 277
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHG-----QLLWREFFYCA 179
+ L+P LRFG LS R + + A P S +L+WREF+
Sbjct: 278 -----SYLAPHLRFGTLSIR----------QAVALAWPSDSEGAATWLSELIWREFYQQF 322
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
+P + P +P+ + W + QTG+P +DA M QL + G++H+ R
Sbjct: 323 LWHHPETAQESFKPAYKNLPFPNRDDWFQAWKDGQTGYPIVDAAMRQLNQSGYMHNRLRM 382
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF-FQQFFHCYCPVKF 298
A FL + DL + W G + F + LLD D + N G W W + + Q +F + P+
Sbjct: 383 ISASFLVK-DLLIDWRWGEQYFAQKLLDYDMASNVGGWQWAASTGCDAQPYFRIFNPITQ 441
Query: 299 GRKADPNGDFI 309
RK DP G FI
Sbjct: 442 SRKFDPEGQFI 452
>gi|76802655|ref|YP_330750.1| deoxyribodipyrimidine photolyase [Natronomonas pharaonis DSM 2160]
gi|76558520|emb|CAI50112.1| deoxyribodipyrimidine photolyase [Natronomonas pharaonis DSM 2160]
Length = 462
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 113/253 (44%), Gaps = 11/253 (4%)
Query: 61 TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
P D ++ +PTL +LGFD P K G A RL LE + + +
Sbjct: 159 VPALADATDETTLPTLADLGFDEPTAELP--KAGTAPARGRLAAFLEDD--IYRYEEARD 214
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK---KAPPPLSLHGQLLWREFFY 177
P + S+ LS L+FG + R + + + + QL WREF+
Sbjct: 215 YPATECTSR--LSADLKFGTIGIRAVDKQVREAIAAAETDSERESAAEFRSQLAWREFYT 272
Query: 178 CAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLA 237
NP I W+ + E LA W +TG+P +DA M QL+ E ++H+
Sbjct: 273 HVLAFNPEVVTENYKRYEHDIDWEDDPELLAAWKRGETGYPIVDAGMRQLQAEAYMHNRV 332
Query: 238 RHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPV 296
R VA FLT+ DL + W G F + L+D D + + G W W S + Q +F + P+
Sbjct: 333 RMIVASFLTK-DLLIDWRHGYAHFRDRLVDHDTANDNGGWQWAASTGTDAQPYFRIFNPM 391
Query: 297 KFGRKADPNGDFI 309
G + DP+ ++I
Sbjct: 392 TQGERYDPDAEYI 404
>gi|406908204|gb|EKD48781.1| hypothetical protein ACD_64C00134G0005 [uncultured bacterium]
Length = 465
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 109/225 (48%), Gaps = 27/225 (12%)
Query: 93 GGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNK 152
GG + ++ L+ K+ A++ + + P L + T LS +FG +S R YH
Sbjct: 208 GGRSNSLTILKM---LKSKQAAYNKERNYPA--LDATTHLSASHKFGTISIRESYH---- 258
Query: 153 LYKRIKKAPPPLSLHGQLL----WREFFYCAATRNPNFDRMLGNPICVQIP---WDVNME 205
IKKA L H QLL WR+FF A NP + G P + W +
Sbjct: 259 ---AIKKA---LGAHSQLLKELYWRDFFTYIAYHNP---FVFGQPYHEKYKTLWWSKSNT 309
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
KW TGFP +DA M Q+ GW+H+ R VA FLT+ DL ++W G K F + L
Sbjct: 310 DFKKWCEGTTGFPIVDAGMRQMNTTGWMHNRVRMIVASFLTK-DLHINWLWGEKYFAQQL 368
Query: 266 LDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
+D D +VN G W W + + Q +F + P +K DPN ++I
Sbjct: 369 VDYDPAVNNGNWQWAASTGCDAQPYFRIFNPWTQQKKFDPNCEYI 413
>gi|427420013|ref|ZP_18910196.1| deoxyribodipyrimidine photolyase [Leptolyngbya sp. PCC 7375]
gi|425762726|gb|EKV03579.1| deoxyribodipyrimidine photolyase [Leptolyngbya sp. PCC 7375]
Length = 482
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 107/246 (43%), Gaps = 14/246 (5%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLE--RHLERKAWVASFGRPKMTPQSLL 126
++ +P+ + LGF LP + GE A +LE H +A+ P +T SLL
Sbjct: 184 DEIALPSAKALGFTWAAPLP--LEPGERAARAQLEFFGHKAIEAYDEQRNFPAVTGTSLL 241
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH---GQLLWREFFYCAATRN 183
S L+FG + R + Y ++ +L WREF+
Sbjct: 242 ------SAALKFGAVGMREVWQTAMTAYDACNSDEGRTNVQTWMKELAWREFYQHVMFFF 295
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P PWD + E A W +TG+P +DA M QL E GW+H+ R VA
Sbjct: 296 PELAHGPYRDAWKDFPWDNDEEKFAAWCEGRTGYPIVDAAMRQLNETGWMHNRCRMIVAS 355
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLT+ DL + W G K F + L+D D S N G W W + S + + P +K D
Sbjct: 356 FLTK-DLIIDWRWGEKYFMQKLVDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAKKFD 414
Query: 304 PNGDFI 309
+ D+I
Sbjct: 415 ADADYI 420
>gi|402556671|ref|YP_006597942.1| deoxyribodipyrimidine photolyase [Bacillus cereus FRI-35]
gi|401797881|gb|AFQ11740.1| deoxyribodipyrimidine photolyase [Bacillus cereus FRI-35]
Length = 476
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 193 MESIWNPTEEGAYKTFKKFFSSKLTFYSEGRDFPNQNVHSMLA------PYLSFGQISVK 246
Query: 145 LFYHDLNKLYKRIKKAPPPL-----SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L +H L + K +K S Q +WREF Y P N P
Sbjct: 247 LMFHYL--INKSNEKQCSLFEQQVNSFIRQFIWREFSYYLLYHYPFTVYKPLNKNFEHFP 304
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ E L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 305 WNNEEELLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 363
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 364 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 414
>gi|354598518|ref|ZP_09016535.1| DNA photolyase FAD-binding [Brenneria sp. EniD312]
gi|353676453|gb|EHD22486.1| DNA photolyase FAD-binding [Brenneria sp. EniD312]
Length = 489
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 110/234 (47%), Gaps = 17/234 (7%)
Query: 82 DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCL 141
DI+G P GET A+ +L R + V + R + P LA + LSP+L G L
Sbjct: 197 DIDGDFPV----GETAALHQLRRFCREQ--VQDYPRQRDLP--ALAGTSKLSPYLALGVL 248
Query: 142 STRLFYHDLNKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC---V 196
S R ++ L + ++ S +L+WREF++ P+ R P
Sbjct: 249 SPRQCFNRLRAECPAMLERRESGAFSWFNELVWREFYHHLLVFWPDLCRH--KPFTDWTR 306
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
++ W + + LA W +TG+P +DA M QL + GW+H+ R A FL + DL + W +
Sbjct: 307 RVQWRQSPDFLAAWQQGKTGYPIVDAAMRQLNQTGWMHNRLRMICASFLVK-DLLIDWRQ 365
Query: 257 GMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G + F LLD + N G W W S + +F + P G + DP G FI
Sbjct: 366 GERYFMSQLLDGSLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGTFI 419
>gi|167846551|ref|ZP_02472059.1| deoxyribodipyrimidine photolyase [Burkholderia pseudomallei B7210]
Length = 289
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 112/237 (47%), Gaps = 11/237 (4%)
Query: 77 EELGFDIEGLLPPTWKGGETEAMRRLERHLERK--AWVASFGRPKMTPQSLLASQTGLSP 134
E G D G L W+ GE A RRL ++ + + A RP +AS + LSP
Sbjct: 1 EPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPG------IASTSRLSP 54
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGNP 193
++RFG LS R +H Y L +L WREF + P+ R
Sbjct: 55 YVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLRH 114
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+PW + ALA W TG+P++DA M +L GW+H+ R A FL + L +
Sbjct: 115 TLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVK-HLLID 173
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ C + +F + PV GRK DP+G ++
Sbjct: 174 WRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYV 230
>gi|238898396|ref|YP_002924077.1| deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|229466155|gb|ACQ67929.1| deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 484
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 109/242 (45%), Gaps = 14/242 (5%)
Query: 75 TLEELGFDIEGLLPPT--WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGL 132
+L EL FD L T + GE A ++L R + K S R + + +GL
Sbjct: 185 SLTELSFDYPLLDFDTELFPIGEAAAQKQLTRFCDAKVSAYSHARDMLA----IKGTSGL 240
Query: 133 SPFLRFGCLSTRLFYHDLNKLY-KRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG 191
SP+L G LS R L + + + I+ +L+WR+F+ P + G
Sbjct: 241 SPYLTLGILSPRQCLGCLREAFPEGIEDHKGAFDWLNELIWRDFYRHLLIAYPRLSK--G 298
Query: 192 NPI---CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRG 248
+P + W + L KW QTG+P +DA M QL GW+H+ R A FL +
Sbjct: 299 HPFIGWTTFVQWHHSDSLLEKWQQGQTGYPIVDAAMRQLNTTGWMHNRLRMITASFLVK- 357
Query: 249 DLWVSWEEGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGD 307
DL + W G + F L+D D + N G W W S + +F + P G + DP G+
Sbjct: 358 DLLIDWRLGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPKGE 417
Query: 308 FI 309
FI
Sbjct: 418 FI 419
>gi|425771501|gb|EKV09943.1| hypothetical protein PDIP_62750 [Penicillium digitatum Pd1]
gi|425776953|gb|EKV15150.1| hypothetical protein PDIG_28310 [Penicillium digitatum PHI26]
Length = 582
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLRFGCLSTRLFYH 148
+ GE EA++RL+ LE K G+ +S+L+ + + LSP+ G LS R
Sbjct: 309 YPAGEHEALQRLDNFLEEK------GKKYEEFRSMLSGEHTSALSPYFACGALSARTAVV 362
Query: 149 DLNKLYKR--IKKAPPPLSLHGQLLWREFFYCAATRNPNF-DRMLGNPICVQIPWDVNME 205
+ K + P ++ +L WR+F+ P P I W+ + +
Sbjct: 363 AAKRTNKGHLDRHDPGYMTWISELAWRDFYKHVLVNWPFICMNKCFKPEHTNIEWEYDKD 422
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W + +TGFP +DA M QLR W+H+ R V+ FLT+ DL + W G + F E L
Sbjct: 423 LFQAWCDGKTGFPIVDAAMRQLRHCAWMHNRTRMVVSSFLTK-DLMLDWRRGERYFMENL 481
Query: 266 LDADWSVNAGMWMWLSCSSFF-QQFFHCYCPVKFGRKADPNGDFI 309
+D D++ N G W + S + Q +F + P++ + DP GD+I
Sbjct: 482 IDGDFASNHGGWGFGSSTGVDPQPYFRIFNPLRQSERFDPEGDYI 526
>gi|77460957|ref|YP_350464.1| deoxyribodipyrimidine photo-lyase type I [Pseudomonas fluorescens
Pf0-1]
gi|77384960|gb|ABA76473.1| deoxyribodipyrimidine photo-lyase type I [Pseudomonas fluorescens
Pf0-1]
Length = 488
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 105/235 (44%), Gaps = 10/235 (4%)
Query: 80 GFDIEGL-LPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRF 138
GF G L W GETEA RRL+ + A + + + P SQ LS +L
Sbjct: 197 GFPTPGASLRALWPAGETEARRRLDTFAD--AQIDYYKSERDFPAKPGTSQ--LSAYLAA 252
Query: 139 GCLSTRLFYHD-LNKLYKRIKKAP-PPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPIC 195
G +S R H L + ++ +LLWREF+ P R P
Sbjct: 253 GVISPRQCLHAALQSNQGEFESGKVGAVTWINELLWREFYKHILVGYPRVSRHRAFRPET 312
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
+ W E LA W A+TG P IDA M QL E GW+H+ R VA FLT+ +L + W
Sbjct: 313 EDLAWRNAPEDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTK-NLLIDWR 371
Query: 256 EGMKIFDELLLDADWSVNAGMWMW-LSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
EG + F L+D D + N G W W S + +F + PV K D G FI
Sbjct: 372 EGERFFMRHLIDGDLAANNGGWQWSASTGTDSAPYFRIFNPVSQSEKFDSEGLFI 426
>gi|349806421|gb|AEQ18683.1| putative cryptochrome-1 [Hymenochirus curtipes]
Length = 104
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 54/75 (72%)
Query: 235 HLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYC 294
H R + GDLW+SWEEG K+F+ELLLDADWS+NAG W WLS S+FF QFF Y
Sbjct: 7 HWFRKGLRHHDNPGDLWISWEEGQKVFEELLLDADWSLNAGNWQWLSASAFFHQFFRVYS 66
Query: 295 PVKFGRKADPNGDFI 309
PV FG+K D NG++I
Sbjct: 67 PVAFGKKTDKNGEYI 81
>gi|387906116|ref|YP_006336453.1| Deoxyribodipyrimidine photolyase [Burkholderia sp. KJ006]
gi|387581008|gb|AFJ89722.1| Deoxyribodipyrimidine photolyase [Burkholderia sp. KJ006]
Length = 505
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 125/257 (48%), Gaps = 31/257 (12%)
Query: 73 VPTLEELGF-----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
V TL EL D G L TW+ GE A +LE LE ++ + + P +
Sbjct: 194 VCTLRELELQPSAPDWAGGLRETWQCGEQAASDQLEAFLENS--LSDYPTLRDFPAARAT 251
Query: 128 SQTGLSPFLRFGCLSTR-LFYHDLN--------KLYKRIKKAPPPLS-LHGQLLWREF-- 175
S+ LSP+LRFG +S R ++Y L+ + I PL+ ++ WREF
Sbjct: 252 SR--LSPYLRFGNISVRQVWYATLSAADAMRSAHTVRGIDSKDGPLNKFLSEIGWREFSY 309
Query: 176 ---FYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGW 232
++ A NF R + +PW + ++L KW +TG+P +DA M +L GW
Sbjct: 310 HLLYHFAPLHQVNFRRQFDS-----MPWRDDAKSLRKWQTGRTGYPLVDAGMRELWHTGW 364
Query: 233 IHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCS-SFFQQFFH 291
+H+ R A FL++ L + W +G F + L+DAD + N W W+S S + +F
Sbjct: 365 MHNRVRMVAASFLSK-HLLIDWRQGEAWFWDTLVDADEASNPASWQWVSGSGADAAPYFR 423
Query: 292 CYCPVKFGRKADPNGDF 308
+ PV +K DP+GD+
Sbjct: 424 IFNPVLQAQKFDPHGDY 440
>gi|300790232|ref|YP_003770523.1| deoxyribodipyrimidine photo-lyase [Amycolatopsis mediterranei U32]
gi|384153759|ref|YP_005536575.1| deoxyribodipyrimidine photo-lyase [Amycolatopsis mediterranei S699]
gi|399542111|ref|YP_006554774.1| deoxyribodipyrimidine photo-lyase [Amycolatopsis mediterranei S699]
gi|299799746|gb|ADJ50121.1| deoxyribodipyrimidine photo-lyase [Amycolatopsis mediterranei U32]
gi|340531913|gb|AEK47118.1| deoxyribodipyrimidine photo-lyase [Amycolatopsis mediterranei S699]
gi|398322881|gb|AFO81828.1| deoxyribodipyrimidine photo-lyase [Amycolatopsis mediterranei S699]
Length = 448
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 90/181 (49%), Gaps = 7/181 (3%)
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
T LSP+LR+GC+ R DL + K SL ++ WREF P R
Sbjct: 226 TRLSPYLRWGCIHPRTILADLAGDDRVGAK-----SLRSEICWREFHADVLWHRPETARE 280
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
+ + +D + EA +W +TG+P +DA M QL EGW+H+ R VA FL + D
Sbjct: 281 NYDHRFDGMKYDDDREAFERWCAGRTGYPIVDAGMRQLLAEGWMHNRVRMVVASFLVK-D 339
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDF 308
L + W G + F + L+D D + N W W++ C + +F + P G K DP GD+
Sbjct: 340 LHLPWWLGARHFMKHLVDGDLASNQLNWQWVAGCGTDAAPYFRIFNPTTQGEKFDPAGDY 399
Query: 309 I 309
+
Sbjct: 400 V 400
>gi|91777293|ref|YP_552501.1| deoxyribodipyrimidine photo-lyase type I [Burkholderia xenovorans
LB400]
gi|91689953|gb|ABE33151.1| deoxyribodipyrimidine photo-lyase type I [Burkholderia xenovorans
LB400]
Length = 499
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 120/268 (44%), Gaps = 22/268 (8%)
Query: 50 PVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERK 109
PV R A P + D +PTLE+LGF L G + A R L+ + R
Sbjct: 189 PVETYAKRLAALPSKFDRQ----LPTLEQLGFAPSNLGELNLPAGMSGAQRLLDDFMTR- 243
Query: 110 AWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPP---PLSL 166
+ S+ + P + + LS LRFG +S R L +L + P +
Sbjct: 244 --IDSYADRRDFPAA--KGPSYLSIHLRFGTVSIRT----LARLAHEMSLQPDGQGSATW 295
Query: 167 HGQLLWREFFYCAATRNPNFDRMLG-NPICVQIPWDVNM---EALAKWANAQTGFPWIDA 222
+L+WR+F++ +P R ++ W+ + EA A W N +TG+P +DA
Sbjct: 296 LSELIWRDFYFMILAHHPRLARGASFREEYDRLRWEQGLQADEAFAAWCNGRTGYPLVDA 355
Query: 223 IMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSC 282
M QL G++H+ R A FL + DL V W G + F E L D D+S N G W W +
Sbjct: 356 AMLQLNRTGYMHNRLRMVTASFLVK-DLGVDWRLGERYFAEQLNDFDFSANNGGWQWAAS 414
Query: 283 SSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
+ Q +F + PV K D G FI
Sbjct: 415 TGCDAQPYFRIFNPVTQSEKFDAEGRFI 442
>gi|16330382|ref|NP_441110.1| deoxyribopyrimidine photolyase [Synechocystis sp. PCC 6803]
gi|451814540|ref|YP_007450992.1| deoxyribopyrimidine photolyase [Synechocystis sp. PCC 6803]
gi|2499552|sp|Q55081.1|PHR_SYNY3 RecName: Full=Deoxyribodipyrimidine photo-lyase; AltName: Full=DNA
photolyase; AltName: Full=Photoreactivating enzyme
gi|1652872|dbj|BAA17790.1| deoxyribopyrimidine photolyase [Synechocystis sp. PCC 6803]
gi|1771978|gb|AAB81109.1| DNA photolyase [Synechocystis sp. PCC 6803]
gi|451780509|gb|AGF51478.1| deoxyribopyrimidine photolyase [Synechocystis sp. PCC 6803]
Length = 488
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 16/247 (6%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
E +P L +LGF + LP T GE A +RL+ W + G + +
Sbjct: 200 EPLAIPQLADLGFIWDQPLPLT--PGEEAAEQRLD-------WFVAHGLEEYQQNRNFPA 250
Query: 129 QTG---LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATR 182
G LS L+FG +S R + + +++ + S+ +L WREF+
Sbjct: 251 LDGTSQLSAALKFGVISPRTLWQTTLEAWEQSRSEEARASIETWQQELAWREFYQHCLYS 310
Query: 183 NPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
P + + PW+ N + W +TG+P IDA M QL + GW+H+ R VA
Sbjct: 311 FPALAQGPYRSPFQEFPWEENQDHFQAWCEGRTGYPIIDAAMAQLNQTGWMHNRCRMIVA 370
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKA 302
FL + DL ++W+ G F + L D D + N G W W + S + + P +K
Sbjct: 371 SFLIK-DLILNWQWGELYFMQTLYDGDLAANNGGWQWSASSGMDPKPLRIFNPHTQAQKF 429
Query: 303 DPNGDFI 309
DP G++I
Sbjct: 430 DPEGEYI 436
>gi|383322123|ref|YP_005382976.1| deoxyribopyrimidine photolyase [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383325292|ref|YP_005386145.1| deoxyribopyrimidine photolyase [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383491176|ref|YP_005408852.1| deoxyribopyrimidine photolyase [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384436443|ref|YP_005651167.1| deoxyribopyrimidine photolyase [Synechocystis sp. PCC 6803]
gi|339273475|dbj|BAK49962.1| deoxyribopyrimidine photolyase [Synechocystis sp. PCC 6803]
gi|359271442|dbj|BAL28961.1| deoxyribopyrimidine photolyase [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359274612|dbj|BAL32130.1| deoxyribopyrimidine photolyase [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359277782|dbj|BAL35299.1| deoxyribopyrimidine photolyase [Synechocystis sp. PCC 6803 substr.
PCC-P]
Length = 479
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 16/247 (6%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQS---L 125
E +P L +LGF + LP T GE A +RL+ W + G +
Sbjct: 191 EPLAIPQLADLGFIWDQPLPLT--PGEEAAEQRLD-------WFVAHGLEEYQQNRNFPA 241
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATR 182
L + LS L+FG +S R + + +++ + S+ +L WREF+
Sbjct: 242 LDGTSQLSAALKFGVISPRTLWQTTLEAWEQSRSEEARASIETWQQELAWREFYQHCLYS 301
Query: 183 NPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
P + + PW+ N + W +TG+P IDA M QL + GW+H+ R VA
Sbjct: 302 FPALAQGPYRSPFQEFPWEENQDHFQAWCEGRTGYPIIDAAMAQLNQTGWMHNRCRMIVA 361
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKA 302
FL + DL ++W+ G F + L D D + N G W W + S + + P +K
Sbjct: 362 SFLIK-DLILNWQWGELYFMQTLYDGDLAANNGGWQWSASSGMDPKPLRIFNPHTQAQKF 420
Query: 303 DPNGDFI 309
DP G++I
Sbjct: 421 DPEGEYI 427
>gi|402493769|ref|ZP_10840518.1| DASH family cryptochrome [Aquimarina agarilytica ZC1]
Length = 432
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 125/264 (47%), Gaps = 23/264 (8%)
Query: 26 KTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGFDIEG 85
KTP + F+ + K P A ++ +Q P+ ++ +P L +LGFD
Sbjct: 148 KTPQIFTHFRKSIEKQTLVLPI-AKISSSFKQQ---PIENNS----TIPKLTDLGFD--N 197
Query: 86 LLPPT-----WKGGETEAMRRLERHLERKAWVAS-FGRPKMTPQSLLASQ--TGLSPFLR 137
P+ +KGGE A+ RL ++ WV+ K T LL S + S +L
Sbjct: 198 FETPSHSAFPFKGGENAALDRLHNYI----WVSKKISYYKKTRNGLLGSDYSSKFSAWLA 253
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ 197
G +S + Y ++ K K ++K L +L+WR++F + ++ N +G + +
Sbjct: 254 NGSISAKTIYFEIKKYEKEVQKNDSTYWLIFELIWRDYFKYISLKHQNAIFKIGGILNKE 313
Query: 198 IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEG 257
W +++ + +W N TG ++DA M +L+ GW+ + R VA + + DL + W G
Sbjct: 314 YAWSTDLKPVNEWINGTTGKTFVDANMLELQHTGWMSNRGRQNVASYFAK-DLLLDWRIG 372
Query: 258 MKIFDELLLDADWSVNAGMWMWLS 281
F+ L+D D N G WM+++
Sbjct: 373 AAYFEAQLIDYDVHSNYGNWMYVA 396
>gi|110833627|ref|YP_692486.1| DNA photolyase [Alcanivorax borkumensis SK2]
gi|110646738|emb|CAL16214.1| DNA photolyase [Alcanivorax borkumensis SK2]
Length = 484
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 105/231 (45%), Gaps = 7/231 (3%)
Query: 81 FDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGC 140
D+ L W GE A ++L++ +ER +A + R + P L+ +GLS L G
Sbjct: 202 LDVPEALTQQWAPGEEAAWQQLDQFMERS--LADYRRNRDFPD--LSGTSGLSVALSAGT 257
Query: 141 LSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLG-NPICVQIP 199
LS + + +L WR+F+ + P R G P +
Sbjct: 258 LSVASCFRAATQAMADAGSRDGAACWIDELAWRDFYRQIMAQFPRVSRGQGFRPETDLLE 317
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W + E A W +TG+P +DA M QL GW+H+ R A FL++ LW+ W G
Sbjct: 318 WKNDDELFAAWCEGRTGYPLVDAAMRQLVATGWMHNRLRMVTAMFLSK-HLWLDWRRGEA 376
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F L+D D++ N G W W + S + +F + PV+ G++ D G FI
Sbjct: 377 FFMTHLIDGDFAANNGGWQWSASSGTDAVPYFRVFNPVRQGQRFDSEGRFI 427
>gi|449492091|ref|XP_004176864.1| PREDICTED: LOW QUALITY PROTEIN: cryptochrome DASH-like [Taeniopygia
guttata]
Length = 488
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 9/246 (3%)
Query: 69 EKYGVPTLEELGFDIEGLLPPT---WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSL 125
E+ +PT+E+ G P T GGET+A+ RL+ + VAS+ K T L
Sbjct: 191 EEGSIPTMEDFGQKDPVDDPRTAFPCSGGETQALMRLQYYFWDTNLVASY---KETRNGL 247
Query: 126 LA--SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
+ T +P+L GC+S R Y + K + + +LLWR++F A +
Sbjct: 248 VGMDYSTKFAPWLALGCISPRYIYEQIQKYERERTANESTYWVLFELLWRDYFRFVALKY 307
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
L IPW +++ + W +TG P++DA M +L G++ + R VA
Sbjct: 308 GRRIFSLRGLQSKDIPWKKDLQLFSCWQEGKTGVPFVDANMRELSATGFMSNRGRQNVAS 367
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 303
FLT+ DL + W G + F+ LL+D D N G W++ + + + +K G D
Sbjct: 368 FLTK-DLGLDWRMGAEWFEYLLVDYDVCSNYGNWLYSAGIGNDPRDNRKFNMIKQGLDYD 426
Query: 304 PNGDFI 309
NGD++
Sbjct: 427 GNGDYV 432
>gi|316933592|ref|YP_004108574.1| DNA photolyase FAD-binding protein [Rhodopseudomonas palustris
DX-1]
gi|315601306|gb|ADU43841.1| DNA photolyase FAD-binding protein [Rhodopseudomonas palustris
DX-1]
Length = 483
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 107/236 (45%), Gaps = 8/236 (3%)
Query: 76 LEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPF 135
LE D G L TW+ GE A RL L R + + + P + S GLSP+
Sbjct: 193 LEPTAPDWAGGLRATWRPGEAAAKTRLADFLAR---LPGYAEGRDYPDRHVTS--GLSPY 247
Query: 136 LRFGCLSTR-LFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPI 194
LRFG +S R ++Y +R AP +L WREF +P+ P
Sbjct: 248 LRFGEISPRQVWYAARFAAAERPAIAPDIDKFLSELGWREFCRHLLADHPDLAARNLQPA 307
Query: 195 CVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
PW + AL W +TG+P +DA M +L G +H+ R V FL + L + W
Sbjct: 308 FDAFPWQSDDGALTAWQRGRTGYPIVDAGMHELWHSGVMHNRVRMVVGSFLVK-HLLIDW 366
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDFI 309
G + F + L+DAD N G W W++ C + +F + PV K D +G +I
Sbjct: 367 RLGEQWFWDTLVDADPGSNPGNWQWVAGCGADAAPYFRVFNPVLQSEKFDADGAYI 422
>gi|384218167|ref|YP_005609333.1| DNA photolyase [Bradyrhizobium japonicum USDA 6]
gi|354957066|dbj|BAL09745.1| DNA photolyase [Bradyrhizobium japonicum USDA 6]
Length = 447
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 130/301 (43%), Gaps = 22/301 (7%)
Query: 14 PSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGV 73
PS+ R E G + + ++ +V+ D P P AP +R A PL D E +
Sbjct: 103 PSAIRNKEGRGLRVFTPF--WRRVVSLGDPPKPLPAPRE---LRPAP-PLAGDALESW-- 154
Query: 74 PTLEELGFDIEGLLPPTWKGGETEAMRRLE---RHLERKAWVASFGRPKMTPQSLLASQT 130
TLE D G L TW GE A RL RH R +V RP +
Sbjct: 155 -TLEPTKPDWAGGLRQTWTPGEASARMRLRDFLRHTAR-VYVGDRDRPDRE------GTS 206
Query: 131 GLSPFLRFGCLSTRLFYHDLN-KLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
LSP LRFG LS R +H + P +L WREF +P+
Sbjct: 207 SLSPHLRFGELSPRQVWHAARFAAAENPAIGPGVEKFLSELGWREFCRHLLHDHPSLATE 266
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
PW + +ALA W +TG+P +DA + +L G +H+ R VA FL +
Sbjct: 267 NLQTNFDGFPWKGDKKALAAWQRGRTGYPIVDAGLRELWHTGVMHNRVRMVVASFLVK-H 325
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLS-CSSFFQQFFHCYCPVKFGRKADPNGDF 308
L + W +G F + L+DAD N W W++ C + +F + P G K DP+G +
Sbjct: 326 LLIDWRDGESWFWDTLVDADAGSNPANWQWVAGCGADAAPYFRVFNPTLQGEKFDPDGAY 385
Query: 309 I 309
+
Sbjct: 386 V 386
>gi|416907322|ref|ZP_11931049.1| deoxyribodipyrimidine photo-lyase [Burkholderia sp. TJI49]
gi|325528961|gb|EGD05987.1| deoxyribodipyrimidine photo-lyase [Burkholderia sp. TJI49]
Length = 452
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 118/257 (45%), Gaps = 31/257 (12%)
Query: 73 VPTLEELGF-----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
V TL EL D L TW+ GE A +LE +E + + + P +
Sbjct: 140 VSTLSELALQPSTPDWAEGLRATWRCGEEAAGHQLEAFIENS--FSDYAGARDFPATRAT 197
Query: 128 SQTGLSPFLRFGCLSTR-LFYHDLNKL-------YKRIKKAPPPL--SLHGQLLWREF-- 175
S+ LSP+LRFG +S R ++Y L+ + RI A +L WREF
Sbjct: 198 SR--LSPYLRFGNISARQVWYATLSAVDAMRSRRVVRIDDAKNESLNKFFSELGWREFSY 255
Query: 176 ---FYCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGW 232
++C NF R +PW + +AL W +TG+P +DA M +L GW
Sbjct: 256 YLLYHCEPLHQFNFRRQFD-----AMPWRTDAKALRAWQRGKTGYPLVDAGMRELWHTGW 310
Query: 233 IHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFH 291
+H+ R A FLT+ L + W EG F + L+DAD + N W W+S S +F
Sbjct: 311 MHNRVRMVTASFLTK-HLLIDWREGEAWFWDTLVDADEASNPAGWQWVSGSGADAAPYFR 369
Query: 292 CYCPVKFGRKADPNGDF 308
+ PV G K D +G++
Sbjct: 370 IFNPVLQGEKFDSSGEY 386
>gi|413958752|ref|ZP_11397991.1| deoxyribodipyrimidine photo-lyase [Burkholderia sp. SJ98]
gi|413941332|gb|EKS73292.1| deoxyribodipyrimidine photo-lyase [Burkholderia sp. SJ98]
Length = 467
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 111/249 (44%), Gaps = 20/249 (8%)
Query: 70 KYGVPTLEELGFDIEGLLP-PTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
K+ +P+L+ LGF G P P + G A + +R + +GR + P L
Sbjct: 155 KHAIPSLDALGF---GDAPAPAFPAGTRGAYELFDDFRDR---MTDYGRTRDFPA--LKG 206
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNF-- 186
+ L LR G +S R + + K + G+L+WREF++ P+
Sbjct: 207 PSYLGVHLRHGTMSIRALARSAHDALRHGDKGAE--TWLGELIWREFYFSVLHHFPHVGV 264
Query: 187 --DRMLGNPICVQIPWDVNMEA---LAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAV 241
D P +I W+ A A W QTG+P +DA M Q+ G++H+ R V
Sbjct: 265 AGDHRAFKPEYDRIGWETGHAADANFAAWCAGQTGYPLVDAAMRQINASGYMHNRLRMVV 324
Query: 242 ACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGR 300
A FLT+ DL + W G F+ L D + S N G W W + S Q +F + PV R
Sbjct: 325 ASFLTK-DLGIDWRRGEAYFEAHLNDFELSNNNGGWQWAASSGCDAQPYFRIFNPVTQSR 383
Query: 301 KADPNGDFI 309
K D G FI
Sbjct: 384 KFDSAGKFI 392
>gi|395500669|ref|ZP_10432248.1| deoxyribodipyrimidine photolyase [Pseudomonas sp. PAMC 25886]
Length = 481
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 108/237 (45%), Gaps = 15/237 (6%)
Query: 83 IEGLLPPT------WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
++G P+ W GETEA RRL++ + A ++ + + P SQ LS +L
Sbjct: 188 VDGFATPSEALRALWPAGETEARRRLDQFAD--AQISYYKDERDFPAKPGTSQ--LSAYL 243
Query: 137 RFGCLSTRLFYHD-LNKLYKRIKKAP-PPLSLHGQLLWREFFYCAATRNPNFDRMLG-NP 193
G +S R H L + ++ +LLWREF+ P R P
Sbjct: 244 AAGVVSPRQCLHAALQSNQGEFESGDIGAITWINELLWREFYKHILVGYPRVSRHRAFRP 303
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+ W + E L W A+TG P IDA M QL E GW+H+ R VA FLT+ +L +
Sbjct: 304 ETEAVAWRNSPEDLKAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTK-NLLID 362
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNGDFI 309
W EG + F L+D D + N G W W S + +F + P+ K D G FI
Sbjct: 363 WREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDGEGVFI 419
>gi|359454744|ref|ZP_09244013.1| deoxyribodipyrimidine photo-lyase [Pseudoalteromonas sp. BSi20495]
gi|358048121|dbj|GAA80262.1| deoxyribodipyrimidine photo-lyase [Pseudoalteromonas sp. BSi20495]
Length = 464
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFFYCAATRNPNFD 187
+GLSP+L G +ST+ ++ + Y I + +L+WREF+ P
Sbjct: 230 SGLSPYLALGIVSTKQLLINIQQRYPDILTTSKSKTFTWINELVWREFYRHLIAEFPKLS 289
Query: 188 RMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
R N + W + W +TG+P +DA M QL++ GW+H+ R VA FLT
Sbjct: 290 RGDNFNEKYNAVVWRKSESDFKAWCEGRTGYPLVDAAMLQLKQTGWMHNRLRMVVASFLT 349
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPN 305
+ L + W EG + F + L+D D + N G W W + + Q +F + P++ + DP
Sbjct: 350 KH-LLIDWREGERFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRVFNPIRQSERFDPT 408
Query: 306 GDFI 309
G FI
Sbjct: 409 GKFI 412
>gi|407958302|dbj|BAM51542.1| deoxyribopyrimidine photolyase [Synechocystis sp. PCC 6803]
Length = 482
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 16/247 (6%)
Query: 69 EKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
E +P L +LGF + LP T GE A +RL+ W + G + +
Sbjct: 194 EPLAIPQLADLGFIWDQPLPLT--PGEEAAEQRLD-------WFVAHGLEEYQQNRNFPA 244
Query: 129 QTG---LSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL---HGQLLWREFFYCAATR 182
G LS L+FG +S R + + +++ + S+ +L WREF+
Sbjct: 245 LDGTSQLSAALKFGVISPRTLWQTTLEAWEQSRSEEARASIETWQQELAWREFYQHCLYS 304
Query: 183 NPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
P + + PW+ N + W +TG+P IDA M QL + GW+H+ R VA
Sbjct: 305 FPALAQGPYRSPFQEFPWEENQDHFQAWCEGRTGYPIIDAAMAQLNQTGWMHNRCRMIVA 364
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKA 302
FL + DL ++W+ G F + L D D + N G W W + S + + P +K
Sbjct: 365 SFLIK-DLILNWQWGELYFMQTLYDGDLAANNGGWQWSASSGMDPKPLRIFNPHTQAQKF 423
Query: 303 DPNGDFI 309
DP G++I
Sbjct: 424 DPEGEYI 430
>gi|392537450|ref|ZP_10284587.1| deoxyribodipyrimidine photolyase [Pseudoalteromonas marina mano4]
Length = 464
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 15/193 (7%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFF------Y 177
+ +GLSP+L G +S + ++ + Y I + +L+WREF+ Y
Sbjct: 226 IKGTSGLSPYLALGIISPKQLLINIQQRYPDILTTSKSKTFTWVNELIWREFYRHLIAEY 285
Query: 178 CAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLA 237
+R NF+ NP+ W + + W +TG+P +DA M QL++ GW+H+
Sbjct: 286 PKLSRGENFNEKY-NPV----KWRKSEKEFNAWCEGRTGYPLVDAAMLQLKQTGWMHNRL 340
Query: 238 RHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPV 296
R VA FLT+ L + W EG + F + L+D D + N G W W + + Q +F + P+
Sbjct: 341 RMVVASFLTK-HLLIDWREGERFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPI 399
Query: 297 KFGRKADPNGDFI 309
+ DP G FI
Sbjct: 400 TQSERFDPTGKFI 412
>gi|293609792|ref|ZP_06692094.1| deoxyribodipyrimidine photolyase [Acinetobacter sp. SH024]
gi|427424953|ref|ZP_18915065.1| FAD binding domain of DNA photolyase [Acinetobacter baumannii
WC-136]
gi|292828244|gb|EFF86607.1| deoxyribodipyrimidine photolyase [Acinetobacter sp. SH024]
gi|425698270|gb|EKU67914.1| FAD binding domain of DNA photolyase [Acinetobacter baumannii
WC-136]
Length = 480
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 114/244 (46%), Gaps = 25/244 (10%)
Query: 82 DIEGLLPPT--------WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLS 133
DIE P+ W GE A+ +L+ ++ + ++ + + P SQ LS
Sbjct: 196 DIEAFFDPSVSKEQQGLWPAGENFALEQLDIFIKDR--LSDYKLERDFPNVRGTSQ--LS 251
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQ------LLWREFFYCAATRNPNFD 187
P+L G LS R L L+ R + L+ GQ L+WREF+ P+
Sbjct: 252 PYLNIGILSIR---QCLQALF-RAEHGNFHLTNEGQQTWLDELIWREFYQHILFDFPHVS 307
Query: 188 RMLGNPICVQ-IPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
+ + Q I W+ N E L W QTG P IDA M QL + GW+H+ R A FL
Sbjct: 308 KHIPFKKDTQKIKWNHNPEHLIAWQTGQTGIPIIDAGMRQLLKTGWMHNRVRMITAMFLC 367
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL-SCSSFFQQFFHCYCPVKFGRKADPN 305
+ +L + W G + F E L+D D + N G W W S + +F + P+ +K DPN
Sbjct: 368 K-NLLIDWRVGEQWFMEHLIDGDLAANNGGWQWCASTGTDAVPYFRIFNPIAQSKKFDPN 426
Query: 306 GDFI 309
GD+I
Sbjct: 427 GDYI 430
>gi|359449397|ref|ZP_09238892.1| deoxyribodipyrimidine photo-lyase [Pseudoalteromonas sp. BSi20480]
gi|358044831|dbj|GAA75141.1| deoxyribodipyrimidine photo-lyase [Pseudoalteromonas sp. BSi20480]
Length = 464
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 15/193 (7%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFF------Y 177
+ +GLSP+L G +S + ++ + Y I + +L+WREF+ Y
Sbjct: 226 IKGTSGLSPYLALGIISPKQLLINIQQRYPDILTTSKSKTFTWVNELIWREFYRHLIAEY 285
Query: 178 CAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLA 237
+R NF+ NP+ W + + W +TG+P +DA M QL++ GW+H+
Sbjct: 286 PKLSRGENFNEKY-NPV----EWRKSEKEFNAWCEGRTGYPLVDAAMLQLKQTGWMHNRL 340
Query: 238 RHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPV 296
R VA FLT+ L + W EG + F + L+D D + N G W W + + Q +F + P+
Sbjct: 341 RMVVASFLTK-HLLIDWREGERFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPI 399
Query: 297 KFGRKADPNGDFI 309
+ DP G FI
Sbjct: 400 TQSERFDPTGKFI 412
>gi|271963152|ref|YP_003337348.1| deoxyribodipyrimidine photo-lyase [Streptosporangium roseum DSM
43021]
gi|270506327|gb|ACZ84605.1| Deoxyribodipyrimidine photo-lyase [Streptosporangium roseum DSM
43021]
Length = 425
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 19/220 (8%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTG-LSPFLRFGCLSTRLFYHD 149
++GGET A R+ + L K V + L ++T LSP+LRFGCLS L
Sbjct: 188 FRGGETVARERMRQWL--KYCVEDYADGH---DDLAGNRTSKLSPYLRFGCLSP-LELES 241
Query: 150 LNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEALAK 209
L++ + QL WR+FF+ P +R P + W + +A
Sbjct: 242 LSENGDDFVR---------QLCWRDFFHQVTRAFPRINRDDYRPQGQE--WRDDEDAAQA 290
Query: 210 WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDAD 269
W +TG P +DA M QL EGW+H+ AR + FL R L V W G + F +LLLD D
Sbjct: 291 WKEGRTGVPIVDAGMRQLLAEGWMHNRARMVTSSFLVR-RLRVDWRVGAEHFFDLLLDGD 349
Query: 270 WSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKADPNGDFI 309
S N G W W++ + + PV+ R+ DP G++I
Sbjct: 350 VSNNYGNWQWVAGTGNDTRPNRIVNPVRQARRFDPEGEYI 389
>gi|119473269|ref|ZP_01614930.1| putative deoxyribodipyrimidine photolyase [Alteromonadales
bacterium TW-7]
gi|119444513|gb|EAW25832.1| putative deoxyribodipyrimidine photolyase [Alteromonadales
bacterium TW-7]
Length = 464
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 15/193 (7%)
Query: 126 LASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFF------Y 177
+ +GLSP+L G +S + ++ + Y I + +L+WREF+ Y
Sbjct: 226 IKGTSGLSPYLALGIVSPKQLLINIQQRYPDILTTSKSKTFTWVNELIWREFYRHLIAEY 285
Query: 178 CAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLA 237
+R NF+ NP+ W + + W +TG+P +DA M QL++ GW+H+
Sbjct: 286 PKLSRGENFNEKY-NPV----EWRKSEKEFNAWCEGRTGYPLVDAAMLQLKQTGWMHNRL 340
Query: 238 RHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPV 296
R VA FLT+ L + W EG + F + L+D D + N G W W + + Q +F + P+
Sbjct: 341 RMVVASFLTK-HLLIDWREGERFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPI 399
Query: 297 KFGRKADPNGDFI 309
+ DP G FI
Sbjct: 400 TQSERFDPTGKFI 412
>gi|414070032|ref|ZP_11406021.1| deoxyribodipyrimidine photo-lyase [Pseudoalteromonas sp. Bsw20308]
gi|410807544|gb|EKS13521.1| deoxyribodipyrimidine photo-lyase [Pseudoalteromonas sp. Bsw20308]
Length = 464
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFFYCAATRNPNFD 187
+GLSP+L G +ST+ ++ + Y I + +L+WREF+ P
Sbjct: 230 SGLSPYLALGIVSTKQLLINIQQRYPDILTTSKSKTFTWINELVWREFYRHLIAEFPKLS 289
Query: 188 RMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
R N + W + W +TG+P +DA M QL++ GW+H+ R VA FLT
Sbjct: 290 RGDNFNEKYNAVVWRKSESDFKAWCEGRTGYPLVDAAMLQLKQTGWMHNRLRMVVASFLT 349
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPN 305
+ L + W EG + F + L+D D + N G W W + + Q +F + P++ + DP
Sbjct: 350 KH-LLIDWREGERFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRVFNPIRQSERFDPT 408
Query: 306 GDFI 309
G FI
Sbjct: 409 GKFI 412
>gi|332535427|ref|ZP_08411214.1| deoxyribodipyrimidine photolyase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035151|gb|EGI71663.1| deoxyribodipyrimidine photolyase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 464
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLH--GQLLWREFFYCAATRNPNFD 187
+GLSP+L G +ST+ ++ + Y I + +L+WREF+ P
Sbjct: 230 SGLSPYLALGIVSTKQLLINIQQRYPDILTTSKSKTFTWINELVWREFYRHLIAEFPKLS 289
Query: 188 RMLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
R N + W + W +TG+P +DA M QL++ GW+H+ R VA FLT
Sbjct: 290 RGDNFNEKYNAVVWRKSESDFKAWCEGRTGYPLVDAAMLQLKQTGWMHNRLRMVVASFLT 349
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPN 305
+ L + W EG + F + L+D D + N G W W + + Q +F + P++ + DP
Sbjct: 350 KH-LLIDWREGERFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRVFNPIRQSERFDPT 408
Query: 306 GDFI 309
G FI
Sbjct: 409 GKFI 412
>gi|154248595|ref|YP_001419553.1| deoxyribodipyrimidine photo-lyase [Xanthobacter autotrophicus Py2]
gi|154162680|gb|ABS69896.1| Deoxyribodipyrimidine photo-lyase [Xanthobacter autotrophicus Py2]
Length = 500
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 126/298 (42%), Gaps = 24/298 (8%)
Query: 20 IEKNGGKTPLTYHQFQSIVAK---MDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTL 76
+E G P T+ F K +D+P PA P + P + E + L
Sbjct: 159 VEGASGGMPRTFSSFHRAALKARRLDTPLPA-----PKHLDGVAHPPEGETLESF---DL 210
Query: 77 EELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
E D G L W GE A RL ++ A +A + + P L + LSP L
Sbjct: 211 EPTHPDWAGGLRSAWTAGEAAAQARLAAFMD--AGLAGYAEGRDRPD--LNHVSRLSPHL 266
Query: 137 RFGCLSTRLFYHDLNKLYKRIKKAPPPL----SLHGQLLWREFFYCAATRNPNFDRMLGN 192
RFG +S R L+ + + PL +L WREF Y P+ R
Sbjct: 267 RFGEISPRQI---LSAVRHAAEAGAVPLVDADKFEAELYWREFSYHLLAEMPDLARSNIQ 323
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
PW L W TG+P +DA + QL + GW+H+ R VA FLT+ L +
Sbjct: 324 HGFDAFPWRECPGELKAWHKGLTGYPLVDAGLRQLWQTGWMHNRVRMVVASFLTK-HLLI 382
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLSCSSF-FQQFFHCYCPVKFGRKADPNGDFI 309
W G F + L+DAD + NA W W++ S +F + PV G K DP+G ++
Sbjct: 383 DWRSGEDWFWDTLVDADGANNAASWQWVAGSGLDAAPYFRIFNPVTQGEKFDPDGTYV 440
>gi|395794837|ref|ZP_10474153.1| deoxyribodipyrimidine photolyase [Pseudomonas sp. Ag1]
gi|395340998|gb|EJF72823.1| deoxyribodipyrimidine photolyase [Pseudomonas sp. Ag1]
Length = 481
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 110/243 (45%), Gaps = 15/243 (6%)
Query: 77 EELGFDIEGLLPPT------WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
+E+ +EG P+ W GE EA RRL++ + A ++ + + P SQ
Sbjct: 182 DEVPDHVEGFATPSEALRALWPAGEAEARRRLDQFAD--AQISYYKDERDFPAKPGTSQ- 238
Query: 131 GLSPFLRFGCLSTRLFYHD-LNKLYKRIKKAP-PPLSLHGQLLWREFFYCAATRNPNFDR 188
LS +L G +S R H L + ++ +LLWREF+ P R
Sbjct: 239 -LSAYLAAGVVSPRQCLHAALQSNQGEFESGDIGTITWINELLWREFYKHILVGYPRVSR 297
Query: 189 MLG-NPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 247
P + W + E L W A+TG P IDA M QL E GW+H+ R VA FLT+
Sbjct: 298 HRAFRPETEAVAWRNSPEDLKAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTK 357
Query: 248 GDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQ-FFHCYCPVKFGRKADPNG 306
+L + W EG + F L+D D + N G W W S + +F + P+ K D G
Sbjct: 358 -NLLIDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDGEG 416
Query: 307 DFI 309
FI
Sbjct: 417 VFI 419
>gi|389695632|ref|ZP_10183274.1| deoxyribodipyrimidine photolyase [Microvirga sp. WSM3557]
gi|388584438|gb|EIM24733.1| deoxyribodipyrimidine photolyase [Microvirga sp. WSM3557]
Length = 492
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 115/241 (47%), Gaps = 12/241 (4%)
Query: 76 LEELGF-----DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
LEELG D G L W+ GE EA R+ RH K + + + P L +
Sbjct: 190 LEELGLEPSSPDWAGGLRTAWRPGE-EAARKSFRHFLSKG-LRGYAENRDRPS--LIGTS 245
Query: 131 GLSPFLRFGCLSTRLFYHDLN-KLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRM 189
LSP LRFG +S R +H + ++ + A +++WR+F + +P+
Sbjct: 246 RLSPHLRFGEISPRQIWHAVTAQVAEHPSLARDAEKYLSEIVWRDFSHQLLHFHPHLPVR 305
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
+ PW + + L W +TG+P +DA M QL + GW+H+ R A FL +
Sbjct: 306 SHSSRFDAFPWIDDPKTLKAWRRGRTGYPIVDAGMRQLWQTGWMHNRVRMITASFLVK-H 364
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFH-CYCPVKFGRKADPNGDF 308
L W +G F + L+DAD + NA W W++ S FH + PV G K DP+GD+
Sbjct: 365 LLTDWRKGEAWFWDTLVDADPANNAFSWQWVAGSGPDSAPFHRIFNPVTQGEKFDPDGDY 424
Query: 309 I 309
+
Sbjct: 425 V 425
>gi|375285088|ref|YP_005105527.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
NC7401]
gi|358353615|dbj|BAL18787.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
NC7401]
Length = 469
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 87 LPPTWKGGETEAMRRLERHLERKAWVASFGR--PKMTPQSLLASQTGLSPFLRFGCLSTR 144
+ W+ E A + ++ K S GR P S+LA P+L FG +S +
Sbjct: 186 MESIWEPTEEGAYKTCKKFFSSKLVSYSEGRDFPNQNAHSMLA------PYLSFGQISVK 239
Query: 145 LFYHDLNKLYKRIKKAPPPL-----SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIP 199
L YH L + K +K S Q +WREF Y P N P
Sbjct: 240 LMYHYL--INKSNEKQCSLFEQQVNSFIRQFIWREFSYYLLYHYPFTVYKPLNKSFEYFP 297
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W+ + L W +TG+P+IDA M +L + G++H+ AR AVA FL + L + W+EG K
Sbjct: 298 WNNEKKLLRVWQKGKTGYPFIDAGMRELWQTGFMHNRARMAVASFLVK-HLLIPWQEGAK 356
Query: 260 IFDELLLDADWSVNAGMWMWLSCS-SFFQQFFHCYCPVKFGRKADPNGDFI 309
F + LLDAD + N W W++ S + +F + P+ G K D +G++I
Sbjct: 357 WFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYI 407
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.137 0.455
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,594,702,860
Number of Sequences: 23463169
Number of extensions: 246408927
Number of successful extensions: 509694
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3170
Number of HSP's successfully gapped in prelim test: 811
Number of HSP's that attempted gapping in prelim test: 498895
Number of HSP's gapped (non-prelim): 4256
length of query: 309
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 167
effective length of database: 9,027,425,369
effective search space: 1507580036623
effective search space used: 1507580036623
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 76 (33.9 bits)