Your job contains 1 sequence.
>psy4171
MSSSIEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQAT
TPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM
TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAA
TRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHA
VACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGR
KADPNGDFI
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4171
(309 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1C2Z9 - symbol:CRY1 "Cryptochrome-1" species:9... 1179 8.5e-120 1
UNIPROTKB|F1NYE9 - symbol:CRY1 "Cryptochrome-1" species:9... 1179 8.5e-120 1
UNIPROTKB|Q8QG61 - symbol:CRY1 "Cryptochrome-1" species:9... 1179 8.5e-120 1
UNIPROTKB|E2RMX4 - symbol:CRY1 "Uncharacterized protein" ... 1178 1.1e-119 1
UNIPROTKB|Q16526 - symbol:CRY1 "Cryptochrome-1" species:9... 1178 1.1e-119 1
UNIPROTKB|F1SPQ5 - symbol:CRY1 "Uncharacterized protein" ... 1177 1.4e-119 1
ZFIN|ZDB-GENE-010426-2 - symbol:cry1a "cryptochrome 1a" s... 1177 1.4e-119 1
RGD|735083 - symbol:Cry1 "cryptochrome 1 (photolyase-like... 1176 1.8e-119 1
UNIPROTKB|Q32Q86 - symbol:Cry1 "Cryptochrome-1" species:1... 1176 1.8e-119 1
UNIPROTKB|Q8WP19 - symbol:CRY1 "Cryptochrome-1" species:9... 1175 2.3e-119 1
MGI|MGI:1270841 - symbol:Cry1 "cryptochrome 1 (photolyase... 1170 7.7e-119 1
UNIPROTKB|Q70AD6 - symbol:CRY1 "Cryptochrome-1" species:1... 1162 5.4e-118 1
ZFIN|ZDB-GENE-010426-4 - symbol:cry2a "cryptochrome 2a" s... 1159 1.1e-117 1
ZFIN|ZDB-GENE-010426-3 - symbol:cry1b "cryptochrome 1b" s... 1148 1.6e-116 1
UNIPROTKB|F1NX44 - symbol:CRY2 "Cryptochrome-2" species:9... 1112 1.1e-112 1
UNIPROTKB|F1P3P5 - symbol:CRY2 "Cryptochrome-2" species:9... 1112 1.1e-112 1
UNIPROTKB|Q8QG60 - symbol:CRY2 "Cryptochrome-2" species:9... 1111 1.4e-112 1
UNIPROTKB|F1PNC9 - symbol:CRY2 "Uncharacterized protein" ... 1111 1.4e-112 1
UNIPROTKB|B4DZD6 - symbol:CRY2 "Cryptochrome-2" species:9... 1111 1.4e-112 1
UNIPROTKB|Q49AN0 - symbol:CRY2 "Cryptochrome-2" species:9... 1111 1.4e-112 1
UNIPROTKB|F1SHJ9 - symbol:CRY2 "Uncharacterized protein" ... 1108 2.9e-112 1
UNIPROTKB|F1N0J9 - symbol:Bt.20450 "Uncharacterized prote... 1106 4.6e-112 1
MGI|MGI:1270859 - symbol:Cry2 "cryptochrome 2 (photolyase... 1105 5.9e-112 1
RGD|620935 - symbol:Cry2 "cryptochrome 2 (photolyase-like... 1098 3.3e-111 1
UNIPROTKB|Q923I8 - symbol:Cry2 "Cryptochrome-2" species:1... 1098 3.3e-111 1
ZFIN|ZDB-GENE-010426-6 - symbol:cry3 "cryptochrome 3" spe... 1070 3.0e-108 1
ZFIN|ZDB-GENE-010426-5 - symbol:cry2b "cryptochrome 2b" s... 1061 2.7e-107 1
UNIPROTKB|F1MXB2 - symbol:CRY1 "Uncharacterized protein" ... 1009 8.8e-102 1
ZFIN|ZDB-GENE-010426-8 - symbol:cry5 "cryptochrome 5" spe... 945 5.3e-95 1
ZFIN|ZDB-GENE-010426-7 - symbol:cry4 "cryptochrome 4" spe... 879 5.3e-88 1
UNIPROTKB|F1P5X2 - symbol:LOC395100 "Uncharacterized prot... 876 1.1e-87 1
UNIPROTKB|Q2TV23 - symbol:LOC395100 "Cryptochrome-like pr... 876 1.1e-87 1
FB|FBgn0016054 - symbol:phr6-4 "(6-4)-photolyase" species... 806 2.9e-80 1
TAIR|locus:2093217 - symbol:UVR3 "UV REPAIR DEFECTIVE 3" ... 767 3.9e-76 1
UNIPROTKB|G4MNA0 - symbol:MGG_02071 "Cryptochrome-1" spec... 364 1.5e-57 3
UNIPROTKB|Q293P8 - symbol:cry "Cryptochrome-1" species:46... 553 1.9e-53 1
UNIPROTKB|Q7PYI7 - symbol:Cry1 "Cryptochrome-1" species:7... 552 2.4e-53 1
UNIPROTKB|Q17DK5 - symbol:cry "Cryptochrome-1" species:71... 551 3.0e-53 1
FB|FBgn0025680 - symbol:cry "cryptochrome" species:7227 "... 529 6.5e-51 1
UNIPROTKB|B0WRR9 - symbol:cry "Cryptochrome-1" species:71... 508 1.1e-48 1
UNIPROTKB|Q7T3R1 - symbol:LOC395100 "Uncharacterized prot... 452 9.3e-43 1
ZFIN|ZDB-GENE-040617-2 - symbol:cry-dash "cryptochrome DA... 272 5.1e-23 1
UNIPROTKB|Q9KNA8 - symbol:phrA "Deoxyribodipyrimidine pho... 261 5.6e-22 1
TIGR_CMR|VC_A0057 - symbol:VC_A0057 "deoxyribodipyrimidin... 261 5.6e-22 1
TIGR_CMR|BA_3180 - symbol:BA_3180 "deoxyribodipyrimidine ... 259 9.8e-22 1
TIGR_CMR|SO_3384 - symbol:SO_3384 "deoxyribodipyrimidine ... 260 9.9e-22 1
TIGR_CMR|CBU_1176 - symbol:CBU_1176 "deoxyribodipyrimidin... 255 2.7e-21 1
UNIPROTKB|Q48MU1 - symbol:phrB "Deoxyribodipyrimidine pho... 253 4.8e-21 1
UNIPROTKB|P00914 - symbol:phr "deoxyribodipyrimidine phot... 221 1.5e-17 1
TIGR_CMR|CPS_1380 - symbol:CPS_1380 "deoxyribodipyrimidin... 214 8.3e-16 1
ASPGD|ASPL0000053661 - symbol:cryA species:162425 "Emeric... 213 2.0e-15 1
TIGR_CMR|SPO_1917 - symbol:SPO_1917 "deoxyribodipyrimidin... 192 8.8e-13 1
TAIR|locus:2018254 - symbol:CRY2 "cryptochrome 2" species... 191 1.9e-12 1
SGD|S000005913 - symbol:PHR1 "DNA photolyase involved in ... 185 8.6e-12 1
UNIPROTKB|Q9KR33 - symbol:cry1 "Cryptochrome DASH" specie... 173 1.5e-10 1
TIGR_CMR|VC_1814 - symbol:VC_1814 "RNA-binding cryptochro... 173 1.5e-10 1
ZFIN|ZDB-GENE-120215-243 - symbol:si:ch73-25i22.2 "si:ch7... 164 6.7e-10 1
TAIR|locus:2138728 - symbol:CRY1 "cryptochrome 1" species... 169 8.7e-10 1
>UNIPROTKB|E1C2Z9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:AADN02006287 EMBL:AADN02006288 EMBL:AADN02006289
IPI:IPI00821281 Ensembl:ENSGALT00000037715 ArrayExpress:E1C2Z9
Uniprot:E1C2Z9
Length = 624
Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
Identities = 212/296 (71%), Positives = 244/296 (82%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLRDDHDEKYGVP 74
+IIE NGG+ PLTY +FQ+++++M+ P E PV TP ++++ TTP+ DDHDEKYGVP
Sbjct: 137 KIIELNGGQPPLTYKRFQTLISRME---PLEMPVETITPEVMQKCTTPVSDDHDEKYGVP 193
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP
Sbjct: 194 SLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSP 253
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP FD+M GNP
Sbjct: 254 YLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNP 313
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
ICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 314 ICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 373
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
WEEGMK+F+ELLLDADWSVNAG WMWLSC HCYCPV FGR+ DPNGD+I
Sbjct: 374 WEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 429
>UNIPROTKB|F1NYE9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
IPI:IPI00577266 GeneTree:ENSGT00500000044813 EMBL:AADN02006287
EMBL:AADN02006288 EMBL:AADN02006289 Ensembl:ENSGALT00000020627
ArrayExpress:F1NYE9 Uniprot:F1NYE9
Length = 621
Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
Identities = 212/296 (71%), Positives = 244/296 (82%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLRDDHDEKYGVP 74
+IIE NGG+ PLTY +FQ+++++M+ P E PV TP ++++ TTP+ DDHDEKYGVP
Sbjct: 137 KIIELNGGQPPLTYKRFQTLISRME---PLEMPVETITPEVMQKCTTPVSDDHDEKYGVP 193
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP
Sbjct: 194 SLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSP 253
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP FD+M GNP
Sbjct: 254 YLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNP 313
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
ICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 314 ICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 373
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
WEEGMK+F+ELLLDADWSVNAG WMWLSC HCYCPV FGR+ DPNGD+I
Sbjct: 374 WEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 429
>UNIPROTKB|Q8QG61 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
EMBL:AY034432 IPI:IPI00577266 RefSeq:NP_989576.1 UniGene:Gga.4107
ProteinModelPortal:Q8QG61 STRING:Q8QG61 GeneID:374093
KEGG:gga:374093 CTD:1407 HOVERGEN:HBG053470 NextBio:20813612
Uniprot:Q8QG61
Length = 621
Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
Identities = 212/296 (71%), Positives = 244/296 (82%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLRDDHDEKYGVP 74
+IIE NGG+ PLTY +FQ+++++M+ P E PV TP ++++ TTP+ DDHDEKYGVP
Sbjct: 137 KIIELNGGQPPLTYKRFQTLISRME---PLEMPVETITPEVMQKCTTPVSDDHDEKYGVP 193
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP
Sbjct: 194 SLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSP 253
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP FD+M GNP
Sbjct: 254 YLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNP 313
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
ICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 314 ICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 373
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
WEEGMK+F+ELLLDADWSVNAG WMWLSC HCYCPV FGR+ DPNGD+I
Sbjct: 374 WEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 429
>UNIPROTKB|E2RMX4 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 CTD:1407 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
GO:GO:0000988 EMBL:AAEX03007373 EMBL:AAEX03007371 EMBL:AAEX03007372
RefSeq:XP_862753.1 Ensembl:ENSCAFT00000002826 GeneID:474528
KEGG:cfa:474528 Uniprot:E2RMX4
Length = 587
Score = 1178 (419.7 bits), Expect = 1.1e-119, P = 1.1e-119
Identities = 213/296 (71%), Positives = 242/296 (81%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLRDDHDEKYGVP 74
+IIE NGG+ PLTY +FQ++++KM+ P E PV T +V + TTPL DDHDEKYGVP
Sbjct: 137 KIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVVEKCTTPLSDDHDEKYGVP 193
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP
Sbjct: 194 SLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSP 253
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP FD+M GNP
Sbjct: 254 YLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNP 313
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
ICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 314 ICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 373
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
WEEGMK+F+ELLLDADWS+NAG WMWLSC HCYCPV FGR+ DPNGD+I
Sbjct: 374 WEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 429
>UNIPROTKB|Q16526 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9606 "Homo sapiens"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042752 "regulation
of circadian rhythm" evidence=ISS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IDA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
[GO:0009882 "blue light photoreceptor activity" evidence=NAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009785
"blue light signaling pathway" evidence=NAS] [GO:0019902
"phosphatase binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0003690 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_24941 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 EMBL:D84657 EMBL:D83702 EMBL:BC030519
IPI:IPI00002540 RefSeq:NP_004066.1 UniGene:Hs.151573
ProteinModelPortal:Q16526 SMR:Q16526 IntAct:Q16526
MINT:MINT-1437226 STRING:Q16526 PhosphoSite:Q16526 DMDM:74735764
PaxDb:Q16526 PRIDE:Q16526 DNASU:1407 Ensembl:ENST00000008527
GeneID:1407 KEGG:hsa:1407 UCSC:uc001tmi.3 GeneCards:GC12M107385
HGNC:HGNC:2384 HPA:CAB018762 MIM:601933 neXtProt:NX_Q16526
PharmGKB:PA26904 InParanoid:Q16526 OMA:FDTDGLP OrthoDB:EOG4DBTDC
PhylomeDB:Q16526 ChiTaRS:CRY1 GenomeRNAi:1407 NextBio:5753
ArrayExpress:Q16526 Bgee:Q16526 CleanEx:HS_CRY1
Genevestigator:Q16526 GermOnline:ENSG00000008405 GO:GO:0000988
Uniprot:Q16526
Length = 586
Score = 1178 (419.7 bits), Expect = 1.1e-119, P = 1.1e-119
Identities = 212/296 (71%), Positives = 242/296 (81%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLRDDHDEKYGVP 74
+IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL DDHDEKYGVP
Sbjct: 137 KIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLSDDHDEKYGVP 193
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP
Sbjct: 194 SLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSP 253
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP FD+M GNP
Sbjct: 254 YLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNP 313
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
ICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 314 ICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 373
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
WEEGMK+F+ELLLDADWS+NAG WMWLSC HCYCPV FGR+ DPNGD+I
Sbjct: 374 WEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 429
>UNIPROTKB|F1SPQ5 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:CU463085 EMBL:CU462969 Ensembl:ENSSSCT00000000173
Uniprot:F1SPQ5
Length = 589
Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
Identities = 212/296 (71%), Positives = 242/296 (81%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLRDDHDEKYGVP 74
+IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL DDHDEKYGVP
Sbjct: 137 KIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLSDDHDEKYGVP 193
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP
Sbjct: 194 SLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSP 253
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP FD+M GNP
Sbjct: 254 YLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNP 313
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
ICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 314 ICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 373
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
WEEGMK+F+ELLLDADWS+NAG WMWLSC HCYCPV FGR+ DPNGD+I
Sbjct: 374 WEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 429
>ZFIN|ZDB-GENE-010426-2 [details] [associations]
symbol:cry1a "cryptochrome 1a" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IDA] [GO:0042542
"response to hydrogen peroxide" evidence=IEP] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-2
GO:GO:0045892 GO:GO:0009649 GO:GO:0006281 GO:GO:0005667
GO:GO:0009416 GO:GO:0042542 Gene3D:3.40.50.620 InterPro:IPR014729
KO:K02295 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC124762 IPI:IPI00650675 UniGene:Dr.82313
ProteinModelPortal:Q08BE4 STRING:Q08BE4 KEGG:dre:100003956
InParanoid:Q08BE4 NextBio:20786059 ArrayExpress:Q08BE4
Uniprot:Q08BE4
Length = 619
Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
Identities = 210/294 (71%), Positives = 244/294 (82%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDS-PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTL 76
+IIE NGG++PLTY +FQ+++++M++ +PAE +T ++ TTPL DDHDEK+GVP+L
Sbjct: 137 KIIELNGGQSPLTYKRFQTLISRMEAVETPAET-ITAEVMGPCTTPLSDDHDEKFGVPSL 195
Query: 77 EELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
EELGFD EGL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP+L
Sbjct: 196 EELGFDTEGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYL 255
Query: 137 RFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
RFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFFY AAT NP FD+M GNPIC
Sbjct: 256 RFGCLSCRLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPIC 315
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
VQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SWE
Sbjct: 316 VQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWE 375
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
EGMK+F+ELLLDADWSVNAG WMWLSC HCYCPV FGR+ DPNGD+I
Sbjct: 376 EGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVSFGRRTDPNGDYI 429
>RGD|735083 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IEA;ISO]
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA;ISO] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA;ISO] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=ISO;ISS] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISO] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=ISO] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 RGD:735083 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0000166 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0048511 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 EMBL:AF545855 EMBL:BC107677
IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 1176 (419.0 bits), Expect = 1.8e-119, P = 1.8e-119
Identities = 211/294 (71%), Positives = 242/294 (82%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDS-PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTL 76
+IIE NGG+ PLTY +FQ++V+KM+ PA+ +T ++ + TTPL DDHDEKYGVP+L
Sbjct: 137 KIIELNGGQPPLTYKRFQTLVSKMEPLEMPADT-ITSDVIGKCTTPLSDDHDEKYGVPSL 195
Query: 77 EELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
EELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP+L
Sbjct: 196 EELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYL 255
Query: 137 RFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
RFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP FD+M GNPIC
Sbjct: 256 RFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPIC 315
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
VQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SWE
Sbjct: 316 VQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWE 375
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
EGMK+F+ELLLDADWS+NAG WMWLSC HCYCPV FGR+ DPNGD+I
Sbjct: 376 EGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 429
>UNIPROTKB|Q32Q86 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:735083 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0048511
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AF545855
EMBL:BC107677 IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 1176 (419.0 bits), Expect = 1.8e-119, P = 1.8e-119
Identities = 211/294 (71%), Positives = 242/294 (82%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDS-PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTL 76
+IIE NGG+ PLTY +FQ++V+KM+ PA+ +T ++ + TTPL DDHDEKYGVP+L
Sbjct: 137 KIIELNGGQPPLTYKRFQTLVSKMEPLEMPADT-ITSDVIGKCTTPLSDDHDEKYGVPSL 195
Query: 77 EELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
EELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP+L
Sbjct: 196 EELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYL 255
Query: 137 RFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
RFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP FD+M GNPIC
Sbjct: 256 RFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPIC 315
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
VQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SWE
Sbjct: 316 VQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWE 375
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
EGMK+F+ELLLDADWS+NAG WMWLSC HCYCPV FGR+ DPNGD+I
Sbjct: 376 EGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 429
>UNIPROTKB|Q8WP19 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9541 "Macaca
fascicularis" [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0048511 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AB074458
ProteinModelPortal:Q8WP19 Uniprot:Q8WP19
Length = 586
Score = 1175 (418.7 bits), Expect = 2.3e-119, P = 2.3e-119
Identities = 211/296 (71%), Positives = 242/296 (81%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLRDDHDEKYGVP 74
+IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL DDHDEKYGVP
Sbjct: 137 KIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLSDDHDEKYGVP 193
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP
Sbjct: 194 SLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSP 253
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY L LYK++K+ + PPLSL+GQLLWREFFY AAT NP FD+M GNP
Sbjct: 254 YLRFGCLSCRLFYFKLTDLYKKVKRNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNP 313
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
ICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 314 ICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 373
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
WEEGMK+F+ELLLDADWS+NAG WMWLSC HCYCPV FGR+ DPNGD+I
Sbjct: 374 WEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 429
>MGI|MGI:1270841 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=ISO;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IDA;IMP] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019902 "phosphatase binding" evidence=ISO] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] [GO:0048511
"rhythmic process" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 MGI:MGI:1270841 GO:GO:0005829
GO:GO:0005739 GO:GO:0005654 GO:GO:0000166 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0003690 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_109335 Reactome:REACT_24972
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
OrthoDB:EOG4DBTDC GO:GO:0000988 EMBL:AB000777 EMBL:AF156986
EMBL:AK162460 EMBL:BC022174 EMBL:BC085499 IPI:IPI00129123
RefSeq:NP_031797.1 UniGene:Mm.26237 ProteinModelPortal:P97784
SMR:P97784 DIP:DIP-38515N IntAct:P97784 STRING:P97784
PhosphoSite:P97784 PRIDE:P97784 Ensembl:ENSMUST00000020227
GeneID:12952 KEGG:mmu:12952 UCSC:uc007gle.1 InParanoid:P97784
NextBio:282662 Bgee:P97784 CleanEx:MM_CRY1 Genevestigator:P97784
GermOnline:ENSMUSG00000020038 Uniprot:P97784
Length = 606
Score = 1170 (416.9 bits), Expect = 7.7e-119, P = 7.7e-119
Identities = 210/294 (71%), Positives = 241/294 (81%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDS-PSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTL 76
+IIE NGG+ PLTY +FQ++V+KM+ PA+ +T ++ + TPL DDHDEKYGVP+L
Sbjct: 137 KIIELNGGQPPLTYKRFQTLVSKMEPLEMPADT-ITSDVIGKCMTPLSDDHDEKYGVPSL 195
Query: 77 EELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
EELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP+L
Sbjct: 196 EELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYL 255
Query: 137 RFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
RFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP FD+M GNPIC
Sbjct: 256 RFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPIC 315
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
VQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SWE
Sbjct: 316 VQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWE 375
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
EGMK+F+ELLLDADWS+NAG WMWLSC HCYCPV FGR+ DPNGD+I
Sbjct: 376 EGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 429
>UNIPROTKB|Q70AD6 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:134510 "Nannospalax
judaei" [GO:0042752 "regulation of circadian rhythm" evidence=ISS]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000166 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AJ606298
ProteinModelPortal:Q70AD6 Uniprot:Q70AD6
Length = 587
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 209/296 (70%), Positives = 240/296 (81%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLRDDHDEKYGVP 74
+IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL DDHDEKYGVP
Sbjct: 137 KIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLSDDHDEKYGVP 193
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGFD +GL W GGETEA+ RLERHLER+AWVA+F RP+M SLLAS TGLSP
Sbjct: 194 SLEELGFDTDGLSSAVWPGGETEALTRLERHLERRAWVANFERPRMNANSLLASPTGLSP 253
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP FD+M GNP
Sbjct: 254 YLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNP 313
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
ICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLT DLW+S
Sbjct: 314 ICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTGSDLWIS 373
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
WEEGMK+F+ELLLDADWS+NAG WMWLSC HCYCPV FGR+ DPNGD+I
Sbjct: 374 WEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 429
>ZFIN|ZDB-GENE-010426-4 [details] [associations]
symbol:cry2a "cryptochrome 2a" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009266 "response to
temperature stimulus" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-4
GO:GO:0006281 GO:GO:0009416 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0009266 EMBL:BX927144 eggNOG:COG0415 HOGENOM:HOG000245622
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 OrthoDB:EOG4DBTDC EMBL:BX784023
IPI:IPI00501773 UniGene:Dr.116325 Ensembl:ENSDART00000100222
Uniprot:B0S7X5
Length = 659
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 211/313 (67%), Positives = 250/313 (79%)
Query: 1 MSSSIEK--KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVR 57
M + +E K + +L + +IIE NGG+ PLTY +FQ+++++MD P P E ++ ++
Sbjct: 118 MEAGVEVIVKTSHTLYNLDKIIELNGGQPPLTYKRFQTLISRMDPPEMPVET-LSNSIMG 176
Query: 58 QATTPLRDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGR 117
TP+ +DH +KYGVP+LEELGFDIEGL W GGETEA+ R+ERHLERKAWVA+F R
Sbjct: 177 CCVTPVSEDHGDKYGVPSLEELGFDIEGLPSAVWPGGETEALTRIERHLERKAWVANFER 236
Query: 118 PKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFF 176
P+M SLLAS TGLSP+LRFGCLS RLFY L LY+++KK + PPLSL+GQLLWREFF
Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKTSTPPLSLYGQLLWREFF 296
Query: 177 YCAATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHL 236
Y AAT NP FD+M GNPICV+IPWD N EALAKWA A+TGFPWIDAIMTQLR+EGWIHHL
Sbjct: 297 YTAATTNPRFDKMEGNPICVRIPWDKNPEALAKWAEAKTGFPWIDAIMTQLRQEGWIHHL 356
Query: 237 ARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPV 296
ARHAVACFLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG WMWLSC HCYCPV
Sbjct: 357 ARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPV 416
Query: 297 KFGRKADPNGDFI 309
FGR+ DPNGDFI
Sbjct: 417 GFGRRTDPNGDFI 429
>ZFIN|ZDB-GENE-010426-3 [details] [associations]
symbol:cry1b "cryptochrome 1b" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-3
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042249
IPI:IPI00863245 UniGene:Dr.158985 ProteinModelPortal:Q9I916
STRING:Q9I916 ArrayExpress:Q9I916 Uniprot:Q9I916
Length = 606
Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
Identities = 206/294 (70%), Positives = 241/294 (81%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRDDHDEKYGVPTL 76
+IIE NGG++PLTY +FQ+++++MD PAE +T ++ + +TP+ DDHD K+GVP+L
Sbjct: 137 KIIEFNGGQSPLTYKRFQTLISRMDPVEMPAET-ITAEIMGKCSTPVSDDHDNKFGVPSL 195
Query: 77 EELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
EELGF+ EGL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP+L
Sbjct: 196 EELGFETEGLSTAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYL 255
Query: 137 RFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPIC 195
RFGCLS RLFY L LY+++KK + P LSL+GQLLWREFFY AAT NP+FD+M NPIC
Sbjct: 256 RFGCLSCRLFYFKLTDLYRKVKKNSTPSLSLYGQLLWREFFYTAATNNPHFDKMEFNPIC 315
Query: 196 VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
VQIPWD N EALAKWA QTGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SWE
Sbjct: 316 VQIPWDRNPEALAKWAEGQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWE 375
Query: 256 EGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
EGMK+F+ELLLDADWSVNAG WMWLSC HCYCPV FGR+ DPNGD+I
Sbjct: 376 EGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYI 429
>UNIPROTKB|F1NX44 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739 GO:GO:0005634
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 GO:GO:0000988 IPI:IPI00572393
OMA:DIQENHD EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
Ensembl:ENSGALT00000038345 ArrayExpress:F1NX44 Uniprot:F1NX44
Length = 537
Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
Identities = 197/296 (66%), Positives = 242/296 (81%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATT---PLRDDHDEKYGVP 74
RIIE NG K PLTY +FQ+I+++M+ P + PV+ ++ +Q T ++++HD+ YGVP
Sbjct: 101 RIIELNGNKPPLTYKRFQAIISRMELP---KKPVSSIVSQQMETCKVDIQENHDDVYGVP 157
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGF +GL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP
Sbjct: 158 SLEELGFPTDGLAPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSP 217
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY+ L +LYK++K+ + PPLSL+GQLLWREFFY AAT NP FDRM GNP
Sbjct: 218 YLRFGCLSCRLFYYHLWELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNP 277
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
IC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 278 ICIQIPWDKNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 337
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
WE G+++FDELLLDAD+SVNAG WMWLSC HCYCPV FGR+ DP+GD++
Sbjct: 338 WESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 393
>UNIPROTKB|F1P3P5 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
IPI:IPI00821771 Ensembl:ENSGALT00000013745 ArrayExpress:F1P3P5
Uniprot:F1P3P5
Length = 531
Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
Identities = 197/296 (66%), Positives = 242/296 (81%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATT---PLRDDHDEKYGVP 74
RIIE NG K PLTY +FQ+I+++M+ P + PV+ ++ +Q T ++++HD+ YGVP
Sbjct: 95 RIIELNGNKPPLTYKRFQAIISRMELP---KKPVSSIVSQQMETCKVDIQENHDDVYGVP 151
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGF +GL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP
Sbjct: 152 SLEELGFPTDGLAPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSP 211
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY+ L +LYK++K+ + PPLSL+GQLLWREFFY AAT NP FDRM GNP
Sbjct: 212 YLRFGCLSCRLFYYHLWELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNP 271
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
IC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 272 ICIQIPWDKNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 331
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
WE G+++FDELLLDAD+SVNAG WMWLSC HCYCPV FGR+ DP+GD++
Sbjct: 332 WESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 387
>UNIPROTKB|Q8QG60 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AY034433
EMBL:AY046568 EMBL:AF251344 IPI:IPI00572393 RefSeq:NP_989575.1
UniGene:Gga.20033 HSSP:P05327 ProteinModelPortal:Q8QG60
STRING:Q8QG60 Ensembl:ENSGALT00000038344 GeneID:374092
KEGG:gga:374092 CTD:1408 InParanoid:Q8QG60 NextBio:20813611
Uniprot:Q8QG60
Length = 582
Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
Identities = 197/296 (66%), Positives = 242/296 (81%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATT---PLRDDHDEKYGVP 74
RIIE NG K PLTY +FQ+I+++M+ P + PV+ ++ +Q T ++++HD+ YGVP
Sbjct: 146 RIIELNGNKPPLTYKRFQAIISRMELP---KKPVSSIVSQQMETCKVDIQENHDDVYGVP 202
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGF +GL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP
Sbjct: 203 SLEELGFPTDGLAPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSP 262
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY+ L +LYK++K+ + PPLSL+GQLLWREFFY AAT NP FDRM GNP
Sbjct: 263 YLRFGCLSCRLFYYRLWELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNP 322
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
IC+QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 323 ICIQIPWDKNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 382
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
WE G+++FDELLLDAD+SVNAG WMWLSC HCYCPV FGR+ DP+GD++
Sbjct: 383 WESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYV 438
>UNIPROTKB|F1PNC9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 CTD:1408 OMA:LCKHLLI EMBL:AAEX03011505
RefSeq:XP_540761.2 Ensembl:ENSCAFT00000014927 GeneID:483641
KEGG:cfa:483641 Uniprot:F1PNC9
Length = 593
Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
Identities = 198/293 (67%), Positives = 234/293 (79%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG K PLTY +FQ+I+++M+ P VT + ++D+HD+ YGVP+LE
Sbjct: 156 KIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESCRADIQDNHDDTYGVPSLE 215
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 216 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 275
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 276 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 335
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 336 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 395
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSC HCYCPV FGR+ DP+GD+I
Sbjct: 396 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 448
>UNIPROTKB|B4DZD6 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0005737
GO:GO:0007623 GO:GO:0006281 GO:GO:0042752 GO:GO:0006606
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AC068385
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOVERGEN:HBG053470 CTD:1408 IPI:IPI00216898
RefSeq:NP_066940.2 UniGene:Hs.532491 DNASU:1408 GeneID:1408
KEGG:hsa:1408 HGNC:HGNC:2385 PharmGKB:PA26905 GenomeRNAi:1408
NextBio:5757 OMA:LCKHLLI EMBL:AK302865 ProteinModelPortal:B4DZD6
SMR:B4DZD6 STRING:B4DZD6 PRIDE:B4DZD6 Ensembl:ENST00000443527
UCSC:uc010rgn.2 ArrayExpress:B4DZD6 Bgee:B4DZD6 Uniprot:B4DZD6
Length = 614
Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
Identities = 199/293 (67%), Positives = 234/293 (79%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 177 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLE 236
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 237 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 296
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 297 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 356
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 357 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 416
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSC HCYCPV FGR+ DP+GD+I
Sbjct: 417 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 469
>UNIPROTKB|Q49AN0 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IDA] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=IDA] [GO:0000719 "photoreactive repair" evidence=IDA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0009785 "blue light signaling pathway"
evidence=NAS] [GO:0009882 "blue light photoreceptor activity"
evidence=NAS] [GO:0019902 "phosphatase binding" evidence=IPI]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=ISS] [GO:0005576 "extracellular region" evidence=IDA]
[GO:2000118 "regulation of sodium-dependent phosphate transport"
evidence=IDA] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0005576
GO:GO:0000166 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0000122 GO:GO:0006606
GO:GO:0003697 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
Reactome:REACT_24941 EMBL:AC068385 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 EMBL:AK294904 EMBL:BC035161 EMBL:BC041814
EMBL:AB014558 IPI:IPI00216898 IPI:IPI00895886 RefSeq:NP_001120929.1
RefSeq:NP_066940.2 UniGene:Hs.532491 ProteinModelPortal:Q49AN0
SMR:Q49AN0 IntAct:Q49AN0 STRING:Q49AN0 DMDM:118572252 PaxDb:Q49AN0
PRIDE:Q49AN0 DNASU:1408 Ensembl:ENST00000417225 GeneID:1408
KEGG:hsa:1408 UCSC:uc009ykw.3 UCSC:uc010rgo.2 GeneCards:GC11P045868
H-InvDB:HIX0201587 HGNC:HGNC:2385 HPA:HPA037577 MIM:603732
neXtProt:NX_Q49AN0 PharmGKB:PA26905 InParanoid:Q49AN0
OrthoDB:EOG4VT5WZ PhylomeDB:Q49AN0 GenomeRNAi:1408 NextBio:5757
ArrayExpress:Q49AN0 Bgee:Q49AN0 CleanEx:HS_CRY2
Genevestigator:Q49AN0 GermOnline:ENSG00000121671 GO:GO:0032515
GO:GO:2000118 Uniprot:Q49AN0
Length = 593
Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
Identities = 199/293 (67%), Positives = 234/293 (79%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+I+++M+ P VT + ++++HDE YGVP+LE
Sbjct: 156 RIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLE 215
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 216 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 275
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 276 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 335
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 336 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 395
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSC HCYCPV FGR+ DP+GD+I
Sbjct: 396 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 448
>UNIPROTKB|F1SHJ9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
OMA:LCKHLLI EMBL:FP101987 Ensembl:ENSSSCT00000014494 Uniprot:F1SHJ9
Length = 613
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 197/293 (67%), Positives = 234/293 (79%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG K PLTY +FQ+++++M+ P VT + ++++HDE YGVP+LE
Sbjct: 176 KIIELNGQKPPLTYKRFQALISRMELPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLE 235
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 236 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 295
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 296 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 355
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 356 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 415
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSC HCYCPV FGR+ DP+GD+I
Sbjct: 416 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 468
>UNIPROTKB|F1N0J9 [details] [associations]
symbol:Bt.20450 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:DAAA02041566 EMBL:DAAA02041564 EMBL:DAAA02041565
IPI:IPI00698451 Ensembl:ENSBTAT00000028277 OMA:DIQENHD
Uniprot:F1N0J9
Length = 610
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 198/293 (67%), Positives = 233/293 (79%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+IIE NG K PLTY +FQ+I+++M+ P VT + +++ HDE YGVP+LE
Sbjct: 173 KIIELNGQKPPLTYKRFQAIISRMELPRKPVGSVTSQQMEGCRAEIQESHDETYGVPSLE 232
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 233 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 292
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 293 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 352
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 353 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 412
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSC HCYCPV FGR+ DP+GD+I
Sbjct: 413 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 465
>MGI|MGI:1270859 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003684 "damaged DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IPI] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016829
"lyase activity" evidence=IEA] [GO:0018298 "protein-chromophore
linkage" evidence=IEA] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0032515 "negative regulation of phosphoprotein
phosphatase activity" evidence=ISO] [GO:0042752 "regulation of
circadian rhythm" evidence=IMP] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 MGI:MGI:1270859 GO:GO:0005829 GO:GO:0005739
GO:GO:0005654 GO:GO:0000166 GO:GO:0003684 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0006606 GO:GO:0003697 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 Reactome:REACT_109335
Reactome:REACT_24972 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AF156987 EMBL:AK041696
EMBL:AK133781 EMBL:BC054794 EMBL:BC066799 EMBL:AK172994
EMBL:AB003433 IPI:IPI00128234 RefSeq:NP_001106804.1
RefSeq:NP_034093.1 UniGene:Mm.254181 ProteinModelPortal:Q9R194
SMR:Q9R194 DIP:DIP-38517N IntAct:Q9R194 STRING:Q9R194
PhosphoSite:Q9R194 PRIDE:Q9R194 Ensembl:ENSMUST00000090559
Ensembl:ENSMUST00000111278 GeneID:12953 KEGG:mmu:12953
InParanoid:Q9R194 OMA:LCKHLLI NextBio:282666 Bgee:Q9R194
CleanEx:MM_CRY2 Genevestigator:Q9R194 GermOnline:ENSMUSG00000068742
Uniprot:Q9R194
Length = 592
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 196/293 (66%), Positives = 234/293 (79%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+++++M+ P V+ + ++++HD+ YGVP+LE
Sbjct: 155 RIIELNGQKPPLTYKRFQALISRMELPKKPAVAVSSQQMESCRAEIQENHDDTYGVPSLE 214
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 215 ELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 274
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LYK++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 275 FGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 334
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 335 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 394
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSC HCYCPV FGR+ DP+GD+I
Sbjct: 395 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 447
>RGD|620935 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003684 "damaged DNA
binding" evidence=IEA;ISO] [GO:0003697 "single-stranded DNA
binding" evidence=IEA;ISO] [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;IEP;ISO] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019902 "phosphatase binding" evidence=ISO]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=ISO] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA;ISO] [GO:2000118 "regulation of
sodium-dependent phosphate transport" evidence=IEA;ISO] [GO:0000719
"photoreactive repair" evidence=ISO] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISO]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISO]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877
IPI:IPI00203659 RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 1098 (391.6 bits), Expect = 3.3e-111, P = 3.3e-111
Identities = 195/293 (66%), Positives = 234/293 (79%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+++++M+ P V+ + ++++HD+ YGVP+LE
Sbjct: 155 RIIELNGQKPPLTYKRFQALISRMELPKKPVGAVSSQHMENCRAEIQENHDDTYGVPSLE 214
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 215 ELGFPTEGLGPAVWQGGETEALVRLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 274
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LY+++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 275 FGCLSCRLFYYRLWDLYRKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 334
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 335 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 394
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSC HCYCPV FGR+ DP+GD+I
Sbjct: 395 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 447
>UNIPROTKB|Q923I8 [details] [associations]
symbol:Cry2 "Cryptochrome-2" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166 GO:GO:0003684
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877 IPI:IPI00203659
RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 1098 (391.6 bits), Expect = 3.3e-111, P = 3.3e-111
Identities = 195/293 (66%), Positives = 234/293 (79%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE NG K PLTY +FQ+++++M+ P V+ + ++++HD+ YGVP+LE
Sbjct: 155 RIIELNGQKPPLTYKRFQALISRMELPKKPVGAVSSQHMENCRAEIQENHDDTYGVPSLE 214
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF EGL P W+GGETEA+ RL++HLERKAWVA++ RP+M SLLAS TGLSP+LR
Sbjct: 215 ELGFPTEGLGPAVWQGGETEALVRLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLR 274
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS RLFY+ L LY+++K+ + PPLSL GQLLWREFFY AAT NP FDRM GNPIC+
Sbjct: 275 FGCLSCRLFYYRLWDLYRKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICI 334
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLWVSWE
Sbjct: 335 QIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 394
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
G+++FDELLLDAD+SVNAG WMWLSC HCYCPV FGR+ DP+GD+I
Sbjct: 395 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 447
>ZFIN|ZDB-GENE-010426-6 [details] [associations]
symbol:cry3 "cryptochrome 3" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0009266 "response
to temperature stimulus" evidence=IDA] [GO:0009416 "response to
light stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-6
GO:GO:0045892 GO:GO:0006281 GO:GO:0005667 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0009266 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042252
IPI:IPI00508328 UniGene:Dr.130308 ProteinModelPortal:Q9I913
STRING:Q9I913 InParanoid:Q9I913 ArrayExpress:Q9I913 Uniprot:Q9I913
Length = 598
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 190/293 (64%), Positives = 228/293 (77%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
RIIE N PLT+ +FQ+IV +++ P +T + + T + D+HDE YGVP+LE
Sbjct: 137 RIIEMNNHSPPLTFKRFQAIVNRLELPRKPLPTITQEQMARCRTQISDNHDEHYGVPSLE 196
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
ELGF +G WKGGETEA+ RL +HL+RKAWVA+F RP+++ QSL S TGLSP+LR
Sbjct: 197 ELGFRTQGDSLHVWKGGETEALERLNKHLDRKAWVANFERPRISGQSLFPSPTGLSPYLR 256
Query: 138 FGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
FGCLS R+FY++L L+ ++++ + PPLSL GQLLWREFFY A T NPNFD M GNPICV
Sbjct: 257 FGCLSCRVFYYNLRDLFMKLRRRSSPPLSLFGQLLWREFFYTAGTNNPNFDHMEGNPICV 316
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
QIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+SWE
Sbjct: 317 QIPWDHNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWES 376
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
GMK+F+ELLLDADWSVNAG WMWLSC HCYCPV FGR+ DP+GD+I
Sbjct: 377 GMKVFEELLLDADWSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYI 429
>ZFIN|ZDB-GENE-010426-5 [details] [associations]
symbol:cry2b "cryptochrome 2b" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-5
GO:GO:0045892 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC096780 EMBL:BC164795 IPI:IPI00498674
UniGene:Dr.31496 InParanoid:Q4V9Q3 Uniprot:Q4V9Q3
Length = 639
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 192/306 (62%), Positives = 233/306 (76%)
Query: 8 KLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDH 67
K++ +L RIIE NGG++PLTY +FQ++V+ M+ P P + ++ + TP+ ++H
Sbjct: 127 KISHTLYDLDRIIELNGGQSPLTYKRFQTLVSSMEPPDPPLSSPDRGMMGKCVTPISENH 186
Query: 68 DEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHL---ERKAWVASFGRPKMTPQS 124
+KYGVP LEELGFD EGL P W GGE+EA++R+ERHL AW +F RPKM
Sbjct: 187 RDKYGVPLLEELGFDTEGLAPAVWPGGESEALKRMERHLGPDSTVAWQENFERPKMNASP 246
Query: 125 LLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRN 183
L+AS GLSP+LRFGCLS RLFY L +LYK++KK P +SL+ ++LWREFFY AAT N
Sbjct: 247 LMASPLGLSPYLRFGCLSCRLFYCKLTQLYKKVKKNMNPSISLYDKILWREFFYTAATNN 306
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
P FDRM GNPIC++IPWD N EALAKWA A+TGFPWIDAIM QLR+EGWIHHLARHAVAC
Sbjct: 307 PRFDRMEGNPICIRIPWDRNAEALAKWAEAKTGFPWIDAIMMQLRQEGWIHHLARHAVAC 366
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKAD 303
FLTRGDLW+SWEEGMK+F+ELLLDADWSVNAG W+ SC HCYCPV FGR+ D
Sbjct: 367 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWLCHSCSSFFQQFFHCYCPVGFGRRID 426
Query: 304 PNGDFI 309
PNGDFI
Sbjct: 427 PNGDFI 432
>UNIPROTKB|F1MXB2 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:DAAA02013749 EMBL:DAAA02013752 EMBL:DAAA02013750
EMBL:DAAA02013751 IPI:IPI00868590 Ensembl:ENSBTAT00000057061
Uniprot:F1MXB2
Length = 587
Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
Identities = 190/294 (64%), Positives = 223/294 (75%)
Query: 18 RIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPV---TPLLVRQATTPLRDDHDEKYGVP 74
+IIE NGG+ PLTY +FQ++++KM+ P E PV T ++ + TTPL DDHDEKYGVP
Sbjct: 137 KIIELNGGQPPLTYKRFQTLISKME---PLEIPVETITSEVIEKCTTPLSDDHDEKYGVP 193
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSP 134
+LEELGFD +GL W GGETEA+ RLERHLERKAWVA+F RP+M SLLAS TGLSP
Sbjct: 194 SLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSP 253
Query: 135 FLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
+LRFGCLS RLFY L LYK++KK + PPLSL+GQLLWREFFY AAT NP FD+M GNP
Sbjct: 254 YLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNP 313
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
ICVQIPWD N EALAKWA +TGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+S
Sbjct: 314 ICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWIS 373
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGD 307
WEEGMK+ L L+ SVN + WL+ H Y P+ G + + G+
Sbjct: 374 WEEGMKVKKHLFLNYRESVNLKSFQWLNQPTHQHQVVHEYSPLLMGSRDEEKGN 427
>ZFIN|ZDB-GENE-010426-8 [details] [associations]
symbol:cry5 "cryptochrome 5" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
ZFIN:ZDB-GENE-010426-8 GO:GO:0006281 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GO:GO:0003914 EMBL:BC044204 IPI:IPI00634330
UniGene:Dr.82314 ProteinModelPortal:Q7ZU36 STRING:Q7ZU36
InParanoid:Q7ZU36 OrthoDB:EOG4G4GQ9 ArrayExpress:Q7ZU36
Uniprot:Q7ZU36
Length = 545
Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
Identities = 172/306 (56%), Positives = 218/306 (71%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPL 63
+ K++ +L + RII++N GKTP+TY + QS+V M P P AP + R +TPL
Sbjct: 150 VTPKISHTLYNIDRIIDENNGKTPMTYIRLQSVVKAMGHPKKPIPAPTNEDM-RGVSTPL 208
Query: 64 RDDHDEKYGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQ 123
DDH+EK+G+PTLE+LG D L P + GGE EA+RRL+ H+ER WV F +PK +P
Sbjct: 209 SDDHEEKFGIPTLEDLGLDTSSLGPHLFPGGEQEALRRLDEHMERTNWVCKFEKPKTSPN 268
Query: 124 SLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRN 183
SL+ S T LSP++RFGCLS R+F+ L +Y+ + PP+SLHGQLLWREFFY A
Sbjct: 269 SLIPSTTVLSPYVRFGCLSARIFWWRLADVYRGKTHSDPPVSLHGQLLWREFFYTTAVGI 328
Query: 184 PNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVAC 243
PNF++M GN CVQ+ WD N E LA W A+TGFP+IDAIMTQLR+EGWIHHLARHAVAC
Sbjct: 329 PNFNKMEGNSACVQVDWDNNPEHLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVAC 388
Query: 244 FLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKAD 303
FLTRGDLW+SWEEG K+F+ELLLD+DWS+NAG W WLS Y P+ FG+K D
Sbjct: 389 FLTRGDLWISWEEGQKVFEELLLDSDWSLNAGNWQWLSASTFFHQYFRVYSPIAFGKKTD 448
Query: 304 PNGDFI 309
+GD+I
Sbjct: 449 KHGDYI 454
>ZFIN|ZDB-GENE-010426-7 [details] [associations]
symbol:cry4 "cryptochrome 4" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009881 "photoreceptor
activity" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-7
GO:GO:0006281 GO:GO:0009881 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 EMBL:FP085425 IPI:IPI00995476
Ensembl:ENSDART00000126053 Uniprot:E7F1Z7
Length = 582
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 161/297 (54%), Positives = 208/297 (70%)
Query: 17 RRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PA-EAPVTPLLVRQATTPLRDDHDEKYGVP 74
+RI++ NGG PLTY +F +++ + P PA + + RQ + + D D Y VP
Sbjct: 158 KRIVKANGGSPPLTYKKFLHVLSVLGEPEKPARDVSIEDFQRRQQQSMM--DVDRVYAVP 215
Query: 75 TLEELGFDIEGLLPPTWKGGETEAMRRLERHLE-RKAWVASFGRPKMTPQSLLASQTGLS 133
+L +LG +E + W GGE+ A++RLE+H + ++ WVA+F +P+ P SLL S TGLS
Sbjct: 216 SLADLGLQVEAEV--LWPGGESHALQRLEKHFQSQQGWVANFSKPRTIPNSLLPSTTGLS 273
Query: 134 PFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRMLGN 192
P+L GCLS R FYH LN +Y + K + PP+SL GQ+LWREFFY A+ PNF +M GN
Sbjct: 274 PYLSLGCLSVRTFYHRLNSIYAQSKNHSLPPVSLQGQVLWREFFYTVASATPNFTKMEGN 333
Query: 193 PICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
IC+QI W + E L KW AQTGFPWIDAIMTQLR+EGWIHHLARHAVACFLTRGDLW+
Sbjct: 334 SICLQIDWYHDPERLEKWRTAQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWI 393
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
SWEEGMK+F+E LLDAD+SVNAG WMWLS +CPV+FGR+ DP G+++
Sbjct: 394 SWEEGMKVFEEFLLDADYSVNAGNWMWLSASAFFHKYTRIFCPVRFGRRTDPQGEYL 450
>UNIPROTKB|F1P5X2 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
IPI:IPI00821352 Ensembl:ENSGALT00000040673 OMA:WTASEEE
ArrayExpress:F1P5X2 Uniprot:F1P5X2
Length = 547
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 165/300 (55%), Positives = 205/300 (68%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRDDHDEK 70
SL +++RI+E NGG PLTY +F I++ + P P P Q +P E
Sbjct: 150 SLYNTQRILELNGGTPPLTYKRFLRILSLLGDPEVPVRNPTAEDF--QRCSPPELGLAEC 207
Query: 71 YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
YGVP +L E + P W+GGE+E ++RLE+HL + WVASF +PK P SLL S T
Sbjct: 208 YGVPLPTDLKIPPESISP--WRGGESEGLQRLEQHLADQGWVASFTKPKTVPNSLLPSTT 265
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRM 189
GLSP+ GCLS R F++ L+ +Y + K + PP+SL GQLLWREFFY A+ PNF +M
Sbjct: 266 GLSPYFSTGCLSVRSFFYRLSNIYAQAKHHSLPPVSLQGQLLWREFFYTVASATPNFTKM 325
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
GNPIC+QI W + E L KW AQTGFPWIDAIMTQLR+EGWIHHLARHA ACFLTRGD
Sbjct: 326 AGNPICLQIRWYEDAERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTRGD 385
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
LW+SWEEGMK+F+ELLLDAD+S+NAG WMWLS +CPV+FGR+ DP G +I
Sbjct: 386 LWISWEEGMKVFEELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTDPEGQYI 445
>UNIPROTKB|Q2TV23 [details] [associations]
symbol:LOC395100 "Cryptochrome-like protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
EMBL:AY300013 IPI:IPI00782853 RefSeq:NP_001034685.1
UniGene:Gga.5544 Ensembl:ENSGALT00000000143 GeneID:395100
KEGG:gga:395100 InParanoid:Q2TV23 OrthoDB:EOG479F6W
NextBio:20815193 Uniprot:Q2TV23
Length = 529
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 165/300 (55%), Positives = 205/300 (68%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRDDHDEK 70
SL +++RI+E NGG PLTY +F I++ + P P P Q +P E
Sbjct: 132 SLYNTQRILELNGGTPPLTYKRFLRILSLLGDPEVPVRNPTAEDF--QRCSPPELGLAEC 189
Query: 71 YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQT 130
YGVP +L E + P W+GGE+E ++RLE+HL + WVASF +PK P SLL S T
Sbjct: 190 YGVPLPTDLKIPPESISP--WRGGESEGLQRLEQHLADQGWVASFTKPKTVPNSLLPSTT 247
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPNFDRM 189
GLSP+ GCLS R F++ L+ +Y + K + PP+SL GQLLWREFFY A+ PNF +M
Sbjct: 248 GLSPYFSTGCLSVRSFFYRLSNIYAQAKHHSLPPVSLQGQLLWREFFYTVASATPNFTKM 307
Query: 190 LGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGD 249
GNPIC+QI W + E L KW AQTGFPWIDAIMTQLR+EGWIHHLARHA ACFLTRGD
Sbjct: 308 AGNPICLQIRWYEDAERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTRGD 367
Query: 250 LWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
LW+SWEEGMK+F+ELLLDAD+S+NAG WMWLS +CPV+FGR+ DP G +I
Sbjct: 368 LWISWEEGMKVFEELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTDPEGQYI 427
>FB|FBgn0016054 [details] [associations]
symbol:phr6-4 "(6-4)-photolyase" species:7227 "Drosophila
melanogaster" [GO:0006281 "DNA repair" evidence=ISS] [GO:0003914
"DNA (6-4) photolyase activity" evidence=ISS;NAS]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
EMBL:AE014134 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 OMA:CLSARTF
EMBL:BT044074 RefSeq:NP_477188.1 RefSeq:NP_724274.1 UniGene:Dm.7857
SMR:Q0E8P0 STRING:Q0E8P0 EnsemblMetazoa:FBtr0081404
EnsemblMetazoa:FBtr0081405 GeneID:35322 KEGG:dme:Dmel_CG2488
UCSC:CG2488-RA CTD:35322 FlyBase:FBgn0016054 InParanoid:Q0E8P0
OrthoDB:EOG49W0WG GenomeRNAi:35322 NextBio:792949 Uniprot:Q0E8P0
Length = 540
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 153/310 (49%), Positives = 203/310 (65%)
Query: 5 IEKKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLR 64
+E + ++ + +I KN GK P+TY +F IV ++ P P ++ TP +
Sbjct: 133 VETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKVPKVLGVPEK---LKNMPTPPK 189
Query: 65 DDHDEK----YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKM 120
D+ ++K Y PT+++L E L P + GGETEA+RR+E L+ + WVA F +P
Sbjct: 190 DEVEQKDSAAYDCPTMKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIWVARFEKPNT 249
Query: 121 TPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCA 179
P SL S T LSP+L+FGCLS RLF L ++ KR K + PP+SL GQL+WREF+Y
Sbjct: 250 APNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYTV 309
Query: 180 ATRNPNFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
A PNFDRMLGN C+QIPW + + L W + +TG+P+IDAIM QLR+EGWIHHLARH
Sbjct: 310 AAAEPNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARH 369
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFG 299
AVACFLTRGDLW+SWEEG ++F++LLLD DW++NAG WMWLS Y PV FG
Sbjct: 370 AVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFG 429
Query: 300 RKADPNGDFI 309
+K DP G +I
Sbjct: 430 KKTDPQGHYI 439
>TAIR|locus:2093217 [details] [associations]
symbol:UVR3 "UV REPAIR DEFECTIVE 3" species:3702
"Arabidopsis thaliana" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISS;IDA]
[GO:0009411 "response to UV" evidence=IMP] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009411
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 EMBL:AB017071
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AB003687 EMBL:AB017331 IPI:IPI00545198
IPI:IPI00657032 RefSeq:NP_001030703.1 RefSeq:NP_566520.1
UniGene:At.188 PDB:3FY4 PDBsum:3FY4 ProteinModelPortal:O48652
SMR:O48652 STRING:O48652 EnsemblPlants:AT3G15620.1 GeneID:820804
KEGG:ath:AT3G15620 GeneFarm:1941 TAIR:At3g15620 InParanoid:O48652
OMA:CLSARTF PhylomeDB:O48652 ProtClustDB:CLSN2688412
BioCyc:MetaCyc:MONOMER-15021 EvolutionaryTrace:O48652
Genevestigator:O48652 GO:GO:0003914 Uniprot:O48652
Length = 556
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 149/304 (49%), Positives = 202/304 (66%)
Query: 10 TLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDE 69
TL P+ IIEKNGGK PL+Y F + + PS A++ + ++ + P+ D +
Sbjct: 161 TLFNPA--HIIEKNGGKPPLSYQSFLKVAGE---PSCAKSEL--VMSYSSLPPIGDIGNL 213
Query: 70 KYG-VPTLEELGF-DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA 127
VP+LEELG+ D E ++GGE+EA++RL + + KAWVA+F +PK P + L
Sbjct: 214 GISEVPSLEELGYKDDEQADWTPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLK 273
Query: 128 -SQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKK-APPPLSLHGQLLWREFFYCAATRNPN 185
+ T +SP+L+FGCLS+R FY L +YK +KK PP+SL GQLLWREFFY A PN
Sbjct: 274 PATTVMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPN 333
Query: 186 FDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFL 245
FD+M GN IC QIPW+ + LA W + +TG+PWIDAIM QL + GW+HHLARH VACFL
Sbjct: 334 FDKMKGNRICKQIPWNEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFL 393
Query: 246 TRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPN 305
TRGDL++ WE+G +F+ LL+D+DW++N G WMWLSC Y P+ FG+K DP+
Sbjct: 394 TRGDLFIHWEQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQFNRIYSPISFGKKYDPD 453
Query: 306 GDFI 309
G +I
Sbjct: 454 GKYI 457
>UNIPROTKB|G4MNA0 [details] [associations]
symbol:MGG_02071 "Cryptochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 EMBL:CM001231 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 RefSeq:XP_003708836.1 EnsemblFungi:MGG_02071T0
GeneID:2681226 KEGG:mgr:MGG_02071 Uniprot:G4MNA0
Length = 679
Score = 364 (133.2 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 61/101 (60%), Positives = 73/101 (72%)
Query: 209 KWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDA 268
+W QTGFPWIDA+M QLR EGWIHHL RH+VACFLTRG +VSWE G+ +F+ELLLD
Sbjct: 389 RWEAGQTGFPWIDALMRQLRVEGWIHHLGRHSVACFLTRGGCYVSWERGLDVFEELLLDH 448
Query: 269 DWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
+ + NAG W WLSC CY P+ FG+K DP+G FI
Sbjct: 449 EPACNAGNWQWLSCTAFFSQYFRCYSPISFGKKWDPDGTFI 489
Score = 223 (83.6 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 56/138 (40%), Positives = 79/138 (57%)
Query: 71 YGVPTLEELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLA-SQ 129
+ + TLEELG+ P +KGGE+ A+R L+ +E + + A+F +P+ +P + S
Sbjct: 221 FAIETLEELGYP-PATTP--YKGGESLALRELDAIIENQVYTATFRKPQTSPAAFEPQST 277
Query: 130 TGLSPFLRFGCLSTRLFYH---DLNKLYKRIKK---APPPLSLHGQLLWREFFYCA-ATR 182
T LSP + FG LS RLFYH D Y + KK + PP SL GQLL+R+ ++ A A
Sbjct: 278 TLLSPAMHFGSLSVRLFYHRVQDTVDAYNQAKKKGASLPPESLTGQLLFRDMYFAAQAAI 337
Query: 183 NPNFDRMLGNPICVQIPW 200
P F + GN C IPW
Sbjct: 338 GPCFSQTAGNAHCRFIPW 355
Score = 55 (24.4 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 12 SLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDS-PSPAEAP 50
+L S I++ NGG+ ++ + +++ AK+ S P P AP
Sbjct: 135 TLWDSDAIVKANGGEPTMSMARLRTVGAKVGSIPRPIPAP 174
>UNIPROTKB|Q293P8 [details] [associations]
symbol:cry "Cryptochrome-1" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005641 "nuclear envelope lumen" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0009785 "blue light
signaling pathway" evidence=ISS] [GO:0009882 "blue light
photoreceptor activity" evidence=ISS] [GO:0042752 "regulation of
circadian rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737 GO:GO:0048471
GO:GO:0045892 GO:GO:0050660 GO:GO:0006281 GO:GO:0006351
GO:GO:0005641 GO:GO:0042752 GO:GO:0048511 GO:GO:0000060
EMBL:CM000070 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GenomeReviews:CM000070_GR eggNOG:COG0415 KO:K02295
OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 RefSeq:XP_001360014.2
GeneID:4803241 KEGG:dpo:Dpse_GA17677 FlyBase:FBgn0077687
InParanoid:Q293P8 Uniprot:Q293P8
Length = 540
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 131/323 (40%), Positives = 170/323 (52%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMD-SPSPA-EAPVTPLLVRQATTPLR 64
+K++ +L R +IE NGG PLTY F V + P PA +A + Q LR
Sbjct: 134 EKVSHTLWDPRLVIETNGGIPPLTYQMFLHTVQIIGVPPRPAIDAHINDATFIQLAPELR 193
Query: 65 DDHDEKYGVPTLEELGF--DIEGLLPP-TWKGGETEAMRRLERHL--ERKAWVASFGRPK 119
VP E D G L W+GGET+A+ LE L ER A+ + P
Sbjct: 194 QHLGCFDQVPNPEHFNIYSDNMGFLAKINWRGGETQALALLEERLKVERNAFERGYYLPN 253
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLSL------H--GQLL 171
++ + +S LRFGCLS R FY ++ L++ ++ A + H GQL+
Sbjct: 254 QANPNIQEAPKSMSAHLRFGCLSVRRFYWSVHDLFENVQLAACVRGVQIEGGAHITGQLI 313
Query: 172 WREFFYCAATRNPNFDRMLGNPICVQIPW---DVNMEALAKWANAQTGFPWIDAIMTQLR 228
WRE+FY + NPN+DRM GN IC+ IPW D N+ L +W QTGFP ID M QL
Sbjct: 314 WREYFYTMSVNNPNYDRMEGNEICLTIPWAKPDENL--LQRWRLGQTGFPLIDGAMRQLL 371
Query: 229 EEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXX 288
EGW+HH R+ VA FLTRG LW SWE G+K F + LLDADWSV AG WMW+S
Sbjct: 372 AEGWLHHTLRNTVATFLTRGGLWQSWEPGLKHFLKYLLDADWSVCAGNWMWVSSSAFERL 431
Query: 289 XXHCY--CPVKFGRKADPNGDFI 309
CPV ++ DP G +I
Sbjct: 432 LDSSLVTCPVALAKRLDPEGVYI 454
>UNIPROTKB|Q7PYI7 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:7165 "Anopheles
gambiae" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 EMBL:AAAB01008987 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
OMA:QMFLHTV OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 EMBL:DQ219482
RefSeq:XP_321104.4 ProteinModelPortal:Q7PYI7 STRING:Q7PYI7
EnsemblMetazoa:AGAP001958-RA GeneID:1281165
KEGG:aga:AgaP_AGAP001958 VectorBase:AGAP001958 CTD:1281165
InParanoid:Q0QW08 PhylomeDB:Q7PYI7 Uniprot:Q7PYI7
Length = 545
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 119/307 (38%), Positives = 165/307 (53%)
Query: 19 IIEKNGGKTPLTYHQFQSIVAKM-DSPSPAEAPVTPLLVRQATTP--LRDDHDEKYGVPT 75
+I+ NG PLTY F V + D P P AP V P L + +P
Sbjct: 146 VIQTNGDIPPLTYQMFLHTVNIIGDPPRPVGAPNFEY-VEFGRVPALLASELKLCQQMPA 204
Query: 76 LEELGFDIEG---LLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPKMTPQSLLASQT 130
++ G +G + W GGET A+ L L E +A+ + P +L T
Sbjct: 205 PDDFGIHYDGNARIAFQKWIGGETRALEALGARLKQEEEAFREGYYLPTQAKPEILGPAT 264
Query: 131 GLSPFLRFGCLSTRLFYHDLNKLYKRIK-----KAPPPLSLHGQLLWREFFYCAATRNPN 185
+S LRFGCLS R+FY ++ L+ +++ K P + GQL+WRE+FY + +NP+
Sbjct: 265 SMSAALRFGCLSVRMFYWCVHDLFAKVQSNSQFKYPGGHHITGQLIWREYFYTMSVQNPH 324
Query: 186 FDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACF 244
+ M NPIC+ IPW ++L +W +TGFP IDA M QL EGW+HH+ R+ A F
Sbjct: 325 YGEMERNPICLNIPWYKPEDDSLTRWKEGRTGFPMIDAAMRQLLAEGWLHHILRNITATF 384
Query: 245 LTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXX--XXHCYCPVKFGRKA 302
LTRG LW+SWEEG++ F + LLDADWSV AG WMW+S C CP+ R+
Sbjct: 385 LTRGGLWLSWEEGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSKCTCPIALARRL 444
Query: 303 DPNGDFI 309
DP GD++
Sbjct: 445 DPKGDYV 451
>UNIPROTKB|Q17DK5 [details] [associations]
symbol:cry "Cryptochrome-1" species:7159 "Aedes aegypti"
[GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:CH477293 RefSeq:XP_001648498.1 UniGene:Aae.11304 STRING:Q17DK5
EnsemblMetazoa:AAEL004146-RA GeneID:5564182
KEGG:aag:AaeL_AAEL004146 VectorBase:AAEL004146 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 OMA:QMFLHTV OrthoDB:EOG437PW2
PhylomeDB:Q17DK5 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 Uniprot:Q17DK5
Length = 545
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 119/319 (37%), Positives = 172/319 (53%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMDSPS-PAEAPVTPLLVRQATTPLRD 65
+K++ +L ++II NGG PLTY F V + P P AP + + +
Sbjct: 132 EKVSHTLWDPQQIIRTNGGIPPLTYQMFLHTVDIIGKPPRPVAAPSFEFVEFGSIPSILA 191
Query: 66 DHDEKYGVPTL--EELGFDIEG---LLPPTWKGGETEAMRRLERHL--ERKAWVASFGRP 118
+ V L E+ G EG + W GGET+A+ L L E +A++ + P
Sbjct: 192 QEVKLQQVRNLSPEDFGIYYEGNPDISHQQWMGGETKALECLGHRLKQEEEAFLGGYFLP 251
Query: 119 KMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK-----KAPPPLSLHGQLLWR 173
L T +S LRFGCLS R+FY ++ LY++++ + P + GQL+WR
Sbjct: 252 TQAKPEFLVPPTSMSAALRFGCLSVRMFYWCVHDLYEKVQANNQYRNPGGQHITGQLIWR 311
Query: 174 EFFYCAATRNPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGW 232
E+FY + NP++ M NPIC+ IPW + ++L +W +TGFP IDA M QL EGW
Sbjct: 312 EYFYTMSVHNPHYAEMEANPICLNIPWYEPKDDSLDRWKEGRTGFPMIDAAMRQLLAEGW 371
Query: 233 IHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXX--XX 290
+HH+ R+ A FLTRG LW+SWE G++ F + LLDADWSV AG WMW+S
Sbjct: 372 LHHILRNITATFLTRGALWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSSAFEKLLDSS 431
Query: 291 HCYCPVKFGRKADPNGDFI 309
C P+ R+ DP G+++
Sbjct: 432 SCTSPIALARRLDPKGEYV 450
>FB|FBgn0025680 [details] [associations]
symbol:cry "cryptochrome" species:7227 "Drosophila
melanogaster" [GO:0007623 "circadian rhythm"
evidence=IGI;IEP;IMP;NAS;TAS;IPI] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] [GO:0003913 "DNA photolyase
activity" evidence=ISS;IMP] [GO:0009785 "blue light signaling
pathway" evidence=IMP] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IMP;IDA] [GO:0008020 "G-protein coupled
photoreceptor activity" evidence=ISS] [GO:0009588 "UV-A, blue light
phototransduction" evidence=ISS] [GO:0009881 "photoreceptor
activity" evidence=IMP;NAS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0043234 "protein complex"
evidence=IPI] [GO:0005641 "nuclear envelope lumen" evidence=IDA]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP;TAS] [GO:0009649 "entrainment of circadian clock"
evidence=IDA;IMP] [GO:0042332 "gravitaxis" evidence=IMP]
[GO:0009637 "response to blue light" evidence=NAS;TAS] [GO:0006281
"DNA repair" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0042752 "regulation of circadian rhythm" evidence=IMP;IDA]
[GO:0045475 "locomotor rhythm" evidence=IMP] [GO:0007602
"phototransduction" evidence=IMP] [GO:0050980 "detection of light
stimulus involved in magnetoreception" evidence=IMP] [GO:0071000
"response to magnetism" evidence=IMP] [GO:0050958
"magnetoreception" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 EMBL:AE014297 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0043234 GO:GO:0050660
GO:GO:0006281 GO:GO:0006351 GO:GO:0005641 GO:GO:0000060
GO:GO:0045475 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0007602 GO:GO:0043153 eggNOG:COG0415 KO:K02295 OMA:QMFLHTV
OrthoDB:EOG437PW2 GO:GO:0009882 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AF099734 EMBL:AB018400 EMBL:AB019389
EMBL:AY051514 RefSeq:NP_732407.1 UniGene:Dm.4579 PDB:4GU5
PDBsum:4GU5 ProteinModelPortal:O77059 SMR:O77059 DIP:DIP-29424N
IntAct:O77059 MINT:MINT-1328097 STRING:O77059 PaxDb:O77059
PRIDE:O77059 EnsemblMetazoa:FBtr0083736 GeneID:42305
KEGG:dme:Dmel_CG3772 UCSC:CG3772-RA FlyBase:FBgn0025680
GeneTree:ENSGT00500000044813 InParanoid:O77059 PhylomeDB:O77059
GenomeRNAi:42305 NextBio:828142 Bgee:O77059 GO:GO:0050980
GO:GO:0042332 GO:GO:0071000 Uniprot:O77059
Length = 542
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 124/321 (38%), Positives = 166/321 (51%)
Query: 7 KKLTLSLPSSRRIIEKNGGKTPLTYHQFQSIVAKMD-SPSP-AEAPVTPLLVRQATTPLR 64
+K++ +L + +IE NGG PLTY F V + P P A+A + +
Sbjct: 134 EKVSHTLWDPQLVIETNGGIPPLTYQMFLHTVQIIGLPPRPTADARLEDATFVELDPEFC 193
Query: 65 DDHDEKYGVPTLEELGF--DIEGLLPP-TWKGGETEAMRRLERHL--ERKAWVASFGRPK 119
+PT E D G L W+GGET+A+ L+ L E+ A+ F P
Sbjct: 194 RSLKLFEQLPTPEHFNVYGDNMGFLAKINWRGGETQALLLLDERLKVEQHAFERGFYLPN 253
Query: 120 MTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIK--------KAPPPLSLHGQLL 171
++ S +S LRFGCLS R FY ++ L+K ++ + + GQL+
Sbjct: 254 QALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQMTGGAHITGQLI 313
Query: 172 WREFFYCAATRNPNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREE 230
WRE+FY + NPN+DRM GN IC+ IPW N L W QTGFP ID M QL E
Sbjct: 314 WREYFYTMSVNNPNYDRMEGNDICLSIPWAKPNENLLQSWRLGQTGFPLIDGAMRQLLAE 373
Query: 231 GWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXX 290
GW+HH R+ VA FLTRG LW SWE G++ F + LLDADWSV AG WMW+S
Sbjct: 374 GWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLD 433
Query: 291 HCY--CPVKFGRKADPNGDFI 309
CPV ++ DP+G +I
Sbjct: 434 SSLVTCPVALAKRLDPDGTYI 454
>UNIPROTKB|B0WRR9 [details] [associations]
symbol:cry "Cryptochrome-1" species:7176 "Culex
quinquefasciatus" [GO:0000060 "protein import into nucleus,
translocation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005641 "nuclear envelope lumen" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0009785 "blue light signaling
pathway" evidence=ISS] [GO:0009882 "blue light photoreceptor
activity" evidence=ISS] [GO:0042752 "regulation of circadian
rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 GO:GO:0005737 GO:GO:0048471 GO:GO:0045892
GO:GO:0050660 GO:GO:0006281 GO:GO:0006351 GO:GO:0005641
GO:GO:0042752 GO:GO:0048511 GO:GO:0000060 GO:GO:0018298
eggNOG:COG0415 KO:K02295 OrthoDB:EOG437PW2 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF48173 EMBL:DS232059 RefSeq:XP_001851403.1
UniGene:Cpi.12243 EnsemblMetazoa:CPIJ009455-RA GeneID:6042266
KEGG:cqu:CpipJ_CPIJ009455 VectorBase:CPIJ009455 PhylomeDB:B0WRR9
Uniprot:B0WRR9
Length = 499
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 103/249 (41%), Positives = 142/249 (57%)
Query: 74 PTLEELGFDIEG---LLPPTWKGGETEAMRRLERHL--ERKAWVASFGRPKMTPQSLLAS 128
P E+ G EG + W GGE +A+ L R L E +A+ + P LA
Sbjct: 156 PVPEDFGIYYEGNADIARQRWTGGEAKALELLGRRLKQEEEAFREGYYLPTQARPDFLAP 215
Query: 129 QTGLSPFLRFGCLSTRLFYHDLNKLYKRIK-----KAPPPLSLHGQLLWREFFYCAATRN 183
+ +S LRFGCLS R+FY ++ L+ R++ K P + GQL+WRE+FY + N
Sbjct: 216 PSSMSAALRFGCLSVRMFYWCVHDLFARVQANNQLKHPGGHHITGQLIWREYFYTMSVHN 275
Query: 184 PNFDRMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVA 242
P++ M NPIC+ IPW + ++L +W +TGFP IDA M QL EGW+HH+ R+ A
Sbjct: 276 PHYAVMELNPICLNIPWYEAKDDSLDRWKEGRTGFPLIDAAMRQLMAEGWLHHILRNITA 335
Query: 243 CFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXX--XXHCYCPVKFGR 300
FLTRG LW+SWE G++ F + LLDADWSV AG WMW+S C PV R
Sbjct: 336 TFLTRGGLWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSSAFEKLLDSSSCTSPVALAR 395
Query: 301 KADPNGDFI 309
+ DP G+++
Sbjct: 396 RLDPKGEYV 404
>UNIPROTKB|Q7T3R1 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 GO:GO:0006281 GO:GO:0003913 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 HSSP:P00914 EMBL:AADN02063941
UniGene:Gga.5544 EMBL:AY102068 IPI:IPI00821473
Ensembl:ENSGALT00000040670 HOGENOM:HOG000202408 InParanoid:Q7T3R1
Uniprot:Q7T3R1
Length = 140
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 76/110 (69%), Positives = 87/110 (79%)
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W + E L KW AQTGFPWIDAIMTQLR+EGWIHHLARHA ACFLTRGDLW+SWEEGMK
Sbjct: 2 WYEDAERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTRGDLWISWEEGMK 61
Query: 260 IFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
+F+ELLLDAD+S+NAG WMWLS +CPV+FGR+ DP G +I
Sbjct: 62 VFEELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTDPEGQYI 111
>ZFIN|ZDB-GENE-040617-2 [details] [associations]
symbol:cry-dash "cryptochrome DASH" species:7955
"Danio rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IDA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA] [GO:0000719 "photoreactive repair"
evidence=IDA] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 ZFIN:ZDB-GENE-040617-2 GO:GO:0050660 GO:GO:0003684
GO:GO:0000719 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0003904
InterPro:IPR014133 TIGRFAMs:TIGR02765 EMBL:BX247944 IPI:IPI00495554
Ensembl:ENSDART00000139329 ArrayExpress:F1R5N7 Bgee:F1R5N7
Uniprot:F1R5N7
Length = 521
Score = 272 (100.8 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 85/293 (29%), Positives = 134/293 (45%)
Query: 25 GKTPLTYHQFQSIVAKMDSPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLEELGF--- 81
G P Y QF+ V P + TP V+ + L E+ +PT + LG
Sbjct: 154 GGLPDVYTQFRKAVEAQGRVRPVLS--TPEQVKSPPSGL-----EEGPIPTFDSLGQTEP 206
Query: 82 --DIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQ--TGLSPFLR 137
D P +GGETEA+ RL+ + VA++ K T ++ T SP+L
Sbjct: 207 LDDCRSAFP--CRGGETEALARLKHYFWDTNAVATY---KETRNGMIGVDFSTKFSPWLA 261
Query: 138 FGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
GC+S R Y + K Y+ + A + +LLWR++F A + N +
Sbjct: 262 LGCISPRYIYEQIKK-YEVERTANQSTYWVIFELLWRDYFKFVALKYGNRIFYMNGLQDK 320
Query: 197 QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEE 256
+PW+ +M+ W +TG P++DA M +L G++ + R VA FLT+ DL + W
Sbjct: 321 HVPWNTDMKMFDAWKEGRTGVPFVDANMRELALTGFMSNRGRQNVASFLTK-DLGLDWRL 379
Query: 257 GMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
G + F+ LL+D D N G W++ + + +K G D NGD++
Sbjct: 380 GAEWFEYLLVDHDVCSNYGNWLYSAGIGNDPRENRKFNMIKQGLDYDNNGDYV 432
>UNIPROTKB|Q9KNA8 [details] [associations]
symbol:phrA "Deoxyribodipyrimidine photo-lyase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 261 (96.9 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 74/238 (31%), Positives = 108/238 (45%)
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
E FD + W + E +R R R+ V + + + P + LSP+L
Sbjct: 189 EQAFDYPRIDSTPW-AADFETVRAQLRDFCRER-VQDYHQARDFPAR--EGTSSLSPYLA 244
Query: 138 FGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
G LS R YH+ + + + + A LS +L+WREF+ PN +
Sbjct: 245 IGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPNLSKSRDFV 300
Query: 194 IC-VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
++ W + E W +TG+P +DA M QL + GW+H+ R VA FLT+ DL +
Sbjct: 301 EWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTK-DLHI 359
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWL-SCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
W G + F L+D D++ N G W W S + PV G K DPNGDFI
Sbjct: 360 DWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFI 417
>TIGR_CMR|VC_A0057 [details] [associations]
symbol:VC_A0057 "deoxyribodipyrimidine photolyase,
cyclobutane pyrimidine dimer-specific" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 261 (96.9 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 74/238 (31%), Positives = 108/238 (45%)
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
E FD + W + E +R R R+ V + + + P + LSP+L
Sbjct: 189 EQAFDYPRIDSTPW-AADFETVRAQLRDFCRER-VQDYHQARDFPAR--EGTSSLSPYLA 244
Query: 138 FGCLSTRL----FYHDLNKLYKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNP 193
G LS R YH+ + + + + A LS +L+WREF+ PN +
Sbjct: 245 IGVLSARQCVARLYHE-SSMGELSEGAQVWLS---ELIWREFYQHLVAIEPNLSKSRDFV 300
Query: 194 IC-VQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWV 252
++ W + E W +TG+P +DA M QL + GW+H+ R VA FLT+ DL +
Sbjct: 301 EWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTK-DLHI 359
Query: 253 SWEEGMKIFDELLLDADWSVNAGMWMWL-SCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
W G + F L+D D++ N G W W S + PV G K DPNGDFI
Sbjct: 360 DWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFI 417
>TIGR_CMR|BA_3180 [details] [associations]
symbol:BA_3180 "deoxyribodipyrimidine photolyase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 EMBL:AE016879 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 RefSeq:NP_845490.2
RefSeq:YP_029213.1 ProteinModelPortal:Q81NL2 DNASU:1086563
EnsemblBacteria:EBBACT00000013148 EnsemblBacteria:EBBACT00000022838
GeneID:1086563 GeneID:2852147 KEGG:ban:BA_3180 KEGG:bat:BAS2956
PATRIC:18783980 ProtClustDB:CLSK584502
BioCyc:BANT260799:GJAJ-3018-MONOMER Uniprot:Q81NL2
Length = 476
Score = 259 (96.2 bits), Expect = 9.8e-22, P = 9.8e-22
Identities = 72/223 (32%), Positives = 105/223 (47%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W+ E A + + K +AS+ + P S L+P+L FG +S +L YH L
Sbjct: 197 WEPTEEGAYKTWKEFFSSK--LASYSEGRDFPNQNAHSM--LAPYLSFGQISVKLIYHYL 252
Query: 151 -NKLYK-RIKKAPPPL-SLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNMEAL 207
NK + + + S QL+WREF Y P N PW+ E L
Sbjct: 253 INKSTESQCSLFEKQVNSFIRQLIWREFSYYLLYHYPFTAYKPLNKSFEHFPWNNEEELL 312
Query: 208 AKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLD 267
W TG+P+IDA M +L + G++H+ R AVA FL + L + W+EG K F + LLD
Sbjct: 313 RVWQKGDTGYPFIDAGMRELWQTGFMHNRTRMAVASFLVK-HLLIPWQEGAKWFMDTLLD 371
Query: 268 ADWSVNAGMWMWLSCXXXXXX-XXHCYCPVKFGRKADPNGDFI 309
AD + N W W++ + P+ G K D NG++I
Sbjct: 372 ADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEYI 414
>TIGR_CMR|SO_3384 [details] [associations]
symbol:SO_3384 "deoxyribodipyrimidine photolyase"
species:211586 "Shewanella oneidensis MR-1" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 GO:GO:0003904
HSSP:P00914 RefSeq:NP_718938.1 ProteinModelPortal:Q8EBW1
GeneID:1171062 KEGG:son:SO_3384 PATRIC:23526448 OMA:WISELAW
ProtClustDB:CLSK907140 Uniprot:Q8EBW1
Length = 512
Score = 260 (96.6 bits), Expect = 9.9e-22, P = 9.9e-22
Identities = 66/225 (29%), Positives = 104/225 (46%)
Query: 91 WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDL 150
W GE +A R L + +++K V + + + P + + +SP+L G LS R L
Sbjct: 233 WAAGEGQAKRLLNQFIQQK--VQDYKQDRDFPA--IDGTSVISPYLAIGVLSPRQCVAAL 288
Query: 151 NKLYKRI--KKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQ---IPWDVNME 205
+ + + P + +L+WREF+ P+ + GN Q + W N
Sbjct: 289 LQRFPEVIVDDTSPGRTWLNELIWREFYRHLLVAFPDLSK--GNNFNRQADHVLWRNNQS 346
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
W +TG+P +DA M QL + GW+H+ R VA FLT+ L + W G + F + L
Sbjct: 347 EFLAWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERYFRQHL 405
Query: 266 LDADWSVNAGMWMWLS-CXXXXXXXXHCYCPVKFGRKADPNGDFI 309
+D D + N G W W + C + P+ K DP+G FI
Sbjct: 406 IDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFDPDGRFI 450
>TIGR_CMR|CBU_1176 [details] [associations]
symbol:CBU_1176 "deoxyribodipyrimidine photolyase - class
I" species:227377 "Coxiella burnetii RSA 493" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:NP_820171.1 HSSP:P00914
ProteinModelPortal:Q83CE4 GeneID:1209079 KEGG:cbu:CBU_1176
PATRIC:17931093 ProtClustDB:CLSK2394345
BioCyc:CBUR227377:GJ7S-1162-MONOMER Uniprot:Q83CE4
Length = 472
Score = 255 (94.8 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 73/225 (32%), Positives = 106/225 (47%)
Query: 91 WKGGETEAMRRLERHLER--KAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYH 148
WK GE A L++ ++ K + A RP ++S + LSP+L FG +S R +
Sbjct: 195 WKPGEKNAQIVLKKFIKENLKNYPAHRDRPD------ISSTSHLSPYLHFGEISIRQVWT 248
Query: 149 DLNKLY---KRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICVQIPWDVNME 205
+ + K ++KA + L QL+WREF Y P R W N
Sbjct: 249 AITQATIQDKNLQKAAD-VFLR-QLIWREFAYYLLWHFPQMGRSNFRNQFDNFKWKKNKN 306
Query: 206 ALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELL 265
L W TG+P +DA M +L G++H+ R VA FL + DL + W EG K F L
Sbjct: 307 WLRAWQKGLTGYPIVDAGMRELWCTGYMHNRVRMIVASFLVK-DLMIDWREGEKWFWNTL 365
Query: 266 LDADWSVNAGMWMWLS-CXXXXXXXXHCYCPVKFGRKADPNGDFI 309
LDAD + NA W W++ C + P+ +K DP+G +I
Sbjct: 366 LDADLANNALGWQWIAGCGPDAAPYFRIFNPILQSKKFDPDGTYI 410
>UNIPROTKB|Q48MU1 [details] [associations]
symbol:phrB "Deoxyribodipyrimidine photolyase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 GO:GO:0018298 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621
OMA:CKVDFWL KO:K01669 GO:GO:0003904 RefSeq:YP_273281.1
ProteinModelPortal:Q48MU1 STRING:Q48MU1 GeneID:3555718
KEGG:psp:PSPPH_1010 PATRIC:19971112 ProtClustDB:CLSK868818
Uniprot:Q48MU1
Length = 482
Score = 253 (94.1 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 74/237 (31%), Positives = 102/237 (43%)
Query: 83 IEGLLPPT------WKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFL 136
+EG P+ W GE EA RR+ + A ++ + + P SQ LS +L
Sbjct: 188 VEGFATPSKALRDLWPAGEAEARRRMATFAD--AQISYYKTERDFPAKPGTSQ--LSAYL 243
Query: 137 RFGCLSTRLFYHD-LNKLYKRIKKAPP-PLSLHGQLLWREFFYCAATRNPNFDRMLG-NP 193
G +S R H L + ++ +LLWREF+ P R P
Sbjct: 244 AAGVISPRQCLHAALGSNQGEFETGDVGTVTWINELLWREFYKHTLVGYPRVSRHRAFRP 303
Query: 194 ICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVS 253
+ W E L W A+TG P IDA M QL E GW+H+ R VA FLT+ +L +
Sbjct: 304 ETEALKWRDAPEELLAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTK-NLLID 362
Query: 254 WEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXX-XXHCYCPVKFGRKADPNGDFI 309
W EG + F L+D D + N G W W S + P+ + DP G FI
Sbjct: 363 WHEGERFFMRHLIDGDLASNNGGWQWSSSTGTDSAPYFRIFNPLSQSERFDPEGVFI 419
>UNIPROTKB|P00914 [details] [associations]
symbol:phr "deoxyribodipyrimidine photolyase
(photoreactivation)" species:83333 "Escherichia coli K-12"
[GO:0018298 "protein-chromophore linkage" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003904 "deoxyribodipyrimidine
photo-lyase activity" evidence=IEA;IDA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 EMBL:K01299 InterPro:IPR006050 Pfam:PF00875
GO:GO:0000166 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669 GO:GO:0003904
EMBL:X57399 PIR:A01137 RefSeq:NP_415236.1 RefSeq:YP_488988.1
PDB:1DNP PDBsum:1DNP ProteinModelPortal:P00914 SMR:P00914
DIP:DIP-10505N IntAct:P00914 MINT:MINT-1302006 PRIDE:P00914
EnsemblBacteria:EBESCT00000003526 EnsemblBacteria:EBESCT00000003527
EnsemblBacteria:EBESCT00000016976 GeneID:12930926 GeneID:947005
KEGG:ecj:Y75_p0688 KEGG:eco:b0708 PATRIC:32116611 EchoBASE:EB0729
EcoGene:EG10736 ProtClustDB:PRK10674 BioCyc:EcoCyc:EG10736-MONOMER
BioCyc:ECOL316407:JW0698-MONOMER BioCyc:MetaCyc:EG10736-MONOMER
SABIO-RK:P00914 EvolutionaryTrace:P00914 Genevestigator:P00914
Uniprot:P00914
Length = 472
Score = 221 (82.9 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 48/145 (33%), Positives = 68/145 (46%)
Query: 169 QLLWREFFYCAATRNPNFDRMLGNPICV---QIPWDVNMEALAKWANAQTGFPWIDAIMT 225
+L+WREF+ T +P+ + P ++ W N L W +TG+P +DA M
Sbjct: 275 ELIWREFYRHLITYHPSLCKH--RPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMR 332
Query: 226 QLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWL-SCXX 284
QL GW+H+ R A FL + DL + W EG + F L+D D + N G W W S
Sbjct: 333 QLNSTGWMHNRLRMITASFLVK-DLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGT 391
Query: 285 XXXXXXHCYCPVKFGRKADPNGDFI 309
+ P G K D G+FI
Sbjct: 392 DAAPYFRIFNPTTQGEKFDHEGEFI 416
>TIGR_CMR|CPS_1380 [details] [associations]
symbol:CPS_1380 "deoxyribodipyrimidine photolyase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:GDLANNQ
KO:K01669 GO:GO:0003904 RefSeq:YP_268123.1
ProteinModelPortal:Q485Z2 STRING:Q485Z2 GeneID:3520518
KEGG:cps:CPS_1380 PATRIC:21465975 ProtClustDB:CLSK715243
BioCyc:CPSY167879:GI48-1461-MONOMER Uniprot:Q485Z2
Length = 470
Score = 214 (80.4 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 62/235 (26%), Positives = 105/235 (44%)
Query: 84 EGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLST 143
+G + TW + L + ++K ++++ + P + +G+SP+L G +S
Sbjct: 196 QGSISSTWPLATVFEQQILPKFYQQK--ISTYKLNRDIPS--IKGTSGISPYLAAGVISP 251
Query: 144 RLFYHDLNKLYKRIKKAPPP--LSLHGQLLWREFFYCAATRNPNF-DRMLGNPICV---- 196
R L + + A S +++WREF+ R+ F ++ L C
Sbjct: 252 RFVLRLLLNKHPDLLVASDSEEFSWLNEIIWREFY-----RHLLFHEQRLCKHQCYKENY 306
Query: 197 -QIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWE 255
++ W + W +TG+P +DA M QL + GW+H+ R VA FLT+ L + W
Sbjct: 307 QEMLWHNDAALFDAWCQGRTGYPLVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWR 365
Query: 256 EGMKIFDELLLDADWSVNAGMWMWL-SCXXXXXXXXHCYCPVKFGRKADPNGDFI 309
G K F + L+D D + N G W W S + P++ + DP G FI
Sbjct: 366 LGEKYFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPIRQSERFDPKGVFI 420
>ASPGD|ASPL0000053661 [details] [associations]
symbol:cryA species:162425 "Emericella nidulans"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0000719
"photoreactive repair" evidence=IGI] [GO:0070797 "negative
regulation of cleistothecium development" evidence=IMP] [GO:0071483
"cellular response to blue light" evidence=IMP] [GO:0071492
"cellular response to UV-A" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0070791 "cleistothecium
development" evidence=IMP] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:BN001308
GO:GO:0006281 EMBL:AACD01000007 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 OrthoDB:EOG4XPTQ3
RefSeq:XP_657991.1 ProteinModelPortal:Q5BGE3 STRING:Q5BGE3
EnsemblFungi:CADANIAT00002312 GeneID:2876167 KEGG:ani:AN0387.2
OMA:HMAPRQA Uniprot:Q5BGE3
Length = 567
Score = 213 (80.0 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 63/221 (28%), Positives = 99/221 (44%)
Query: 94 GETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLFYHDLNKL 153
GE E +RRLE LE KA R ++ ++ + LSP+ G LS R +
Sbjct: 297 GEHEGLRRLEEFLE-KATAYDDERNFLSGETT----SKLSPYFASGSLSARTAVAKAREA 351
Query: 154 YK-RIKKAPPP-LSLHGQLLWREFFYCAATRNPNF--DRMLGNPICVQIPWDVNMEALAK 209
+I + +S ++ WR+F+ P ++ I W N
Sbjct: 352 NAGKISRGEAGYISWISEVAWRDFYKHVLVHWPFICMNKCFKFEF-TNIDWSYNNTHFEA 410
Query: 210 WANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDELLLDAD 269
WA +TG+P +DA M QL W+H+ R V+ FL + DL + W G + F E L+D D
Sbjct: 411 WAAGKTGYPLVDAAMRQLHATAWMHNRCRMVVSSFLCK-DLLIDWRRGERYFMEHLIDGD 469
Query: 270 WSVNAGMWMWLSCXXXXXX-XXHCYCPVKFGRKADPNGDFI 309
++ N G W + S + P++ + DP+G+FI
Sbjct: 470 FASNHGGWGFGSSTGVDPQPYFRIFNPIRQSERFDPDGEFI 510
>TIGR_CMR|SPO_1917 [details] [associations]
symbol:SPO_1917 "deoxyribodipyrimidine photolyase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:YP_167152.1 ProteinModelPortal:Q5LS53
GeneID:3192692 KEGG:sil:SPO1917 PATRIC:23377163
ProtClustDB:CLSK933677 Uniprot:Q5LS53
Length = 481
Score = 192 (72.6 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 75/295 (25%), Positives = 116/295 (39%)
Query: 20 IEKNGGKTPLTYHQFQSIVAKMD--SPSPAEAPVTPLLVRQATTPLRDDHDEKYGVPTLE 77
+E G Y F V++ + +P PA A V P + L D +G+
Sbjct: 137 VETGAGGFYKVYTPFWRAVSQREVSAPDPAPARVRPPEAWPGSEALSD-----WGLGAPM 191
Query: 78 ELGFDIEGLLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLR 137
G ++ GE A+ RL+R + + + + P + LS L
Sbjct: 192 RRG---AAVVATHQAPGEAAALERLDRFIA--TGIGQYDACRDLPAG--DGTSTLSDALS 244
Query: 138 FGCLSTRLFYHDLNKL-YKRIKKAPPPLSLHGQLLWREFFYCAATRNPNFDRMLGNPICV 196
G + R +H + +K + A L QL+WR+F Y P+ P
Sbjct: 245 LGEIGPRTLWHRAGEAAHKGAQGAETFLK---QLVWRDFAYHLMYHTPHLLSENWRPGWE 301
Query: 197 QIPW--DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSW 254
PW D W +TG P +DA M ++ G +H+ AR A +LT+ L V W
Sbjct: 302 VFPWATDPADPGFVAWTRGRTGVPLVDAAMREMYVTGRMHNRARMIAASYLTK-HLMVHW 360
Query: 255 EEGMKIFDELLLDADWSVNAGMWMWLS-CXXXXXXXXHCYCPVKFGRKADPNGDF 308
+ GM F + L D D + NA W W++ C + P +K DP G +
Sbjct: 361 KLGMDWFADCLTDWDPAANAMGWQWVAGCGPDAAPYFRIFNPETQAKKFDPKGRY 415
>TAIR|locus:2018254 [details] [associations]
symbol:CRY2 "cryptochrome 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009882 "blue light photoreceptor activity" evidence=ISS]
[GO:0005773 "vacuole" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IGI] [GO:0010118 "stomatal movement" evidence=IGI]
[GO:0009909 "regulation of flower development" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] [GO:0006338 "chromatin remodeling" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0010075 "regulation of meristem growth"
evidence=IGI] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0009416 "response to light stimulus" evidence=IEP] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0009638 "phototropism"
evidence=IGI] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0005773
GO:GO:0009414 GO:GO:0006281 GO:GO:0010118 GO:GO:0006338
EMBL:AC000104 GO:GO:0018298 GO:GO:0009911 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0010075 eggNOG:COG0415 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
ProtClustDB:CLSN2681786 GO:GO:0010617 InterPro:IPR014134
TIGRFAMs:TIGR02766 EMBL:U62549 EMBL:U62550 EMBL:X99061 EMBL:U43397
EMBL:AY057440 EMBL:AY057441 EMBL:AY057442 EMBL:EU351967
EMBL:EU351968 EMBL:EU351969 EMBL:EU351970 EMBL:EU351971
EMBL:EU351972 EMBL:EU351973 EMBL:EU351974 EMBL:EU351975
EMBL:EU351976 EMBL:EU351977 EMBL:EU351978 EMBL:EU351979
EMBL:EU351980 EMBL:EU351981 EMBL:EU351982 EMBL:EU351983
EMBL:EU351984 EMBL:EU351985 EMBL:EU351986 EMBL:EU351987
EMBL:EU351988 EMBL:EU351989 EMBL:EU351990 EMBL:EU351991
EMBL:EU351993 EMBL:EU351992 EMBL:EU351994 EMBL:EU351995
EMBL:EU351996 EMBL:EU351997 EMBL:EU351998 EMBL:BT008576
EMBL:BT008648 EMBL:AY576241 EMBL:AY576242 EMBL:AY576243
EMBL:AY576244 EMBL:AY576245 EMBL:AY576246 EMBL:AY576247
EMBL:AY576248 EMBL:AY576249 EMBL:AY576250 EMBL:AY576251
EMBL:AY576252 EMBL:AY576253 EMBL:AY576254 EMBL:AY576255
EMBL:AY576256 EMBL:AY576257 EMBL:AY576258 EMBL:AY576259
EMBL:AY576260 EMBL:AY576261 EMBL:AY576262 EMBL:AY576263
EMBL:AY576264 EMBL:AY576265 EMBL:AY576266 EMBL:AY576267
EMBL:AY576268 EMBL:AY576269 EMBL:AY576270 EMBL:AY576271
EMBL:AK220946 IPI:IPI00528436 PIR:A86176 PIR:S71221
RefSeq:NP_171935.1 RefSeq:NP_849588.1 UniGene:At.21976
ProteinModelPortal:Q96524 SMR:Q96524 DIP:DIP-33589N IntAct:Q96524
MINT:MINT-207946 STRING:Q96524 PaxDb:Q96524 PRIDE:Q96524
EnsemblPlants:AT1G04400.1 EnsemblPlants:AT1G04400.2 GeneID:839529
KEGG:ath:AT1G04400 TAIR:At1g04400 InParanoid:Q96524 KO:K12119
OMA:GDLANNQ PhylomeDB:Q96524 Genevestigator:Q96524
GermOnline:AT1G04400 GO:GO:0009638 Uniprot:Q96524
Length = 612
Score = 191 (72.3 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 70/251 (27%), Positives = 115/251 (45%)
Query: 75 TLEELGFDIEG------LLPPTWKGGETEAMRRLERHLERKAWVASFGRPKMTPQSLLAS 128
++EELG + E LL W G + A + L +E++ + + + + ++ +
Sbjct: 188 SIEELGLENEAEKPSNALLTRAWSPGWSNADKLLNEFIEKQ--LIDYAK---NSKKVVGN 242
Query: 129 QTGL-SPFLRFGCLSTR-LFYHDLNK--LYKRIKKAP----PPLSLHGQLLWREFFYCAA 180
T L SP+L FG +S R +F K ++ R K + L L G L RE+
Sbjct: 243 STSLLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGL-REYSRYIC 301
Query: 181 TRNP-NFDRMLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARH 239
P ++ L + + PWD +++ W +TG+P +DA M +L GW+H+ R
Sbjct: 302 FNFPFTHEQSLLSHLRF-FPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRV 360
Query: 240 AVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXX-XXXXXXHCYCPVKF 298
V+ F + L + W+ GMK F + LLDAD + W ++S P
Sbjct: 361 IVSSFAVKF-LLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQ 419
Query: 299 GRKADPNGDFI 309
G K DP G++I
Sbjct: 420 GAKYDPEGEYI 430
>SGD|S000005913 [details] [associations]
symbol:PHR1 "DNA photolyase involved in photoreactivation"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0000719 "photoreactive repair" evidence=TAS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IEA;IDA;TAS]
[GO:0005634 "nucleus" evidence=IEA;TAS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 SGD:S000005913 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 EMBL:BK006948 GO:GO:0000166
GO:GO:0003677 GO:GO:0003729 GO:GO:0018298 GO:GO:0000719
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 GeneTree:ENSGT00500000044813 KO:K01669
GO:GO:0003904 EMBL:X03183 EMBL:M11578 EMBL:Z75294 PIR:S67298
RefSeq:NP_015031.1 ProteinModelPortal:P05066 SMR:P05066
DIP:DIP-6327N IntAct:P05066 MINT:MINT-688138 STRING:P05066
PaxDb:P05066 PeptideAtlas:P05066 EnsemblFungi:YOR386W GeneID:854568
KEGG:sce:YOR386W CYGD:YOR386w OMA:CEDANAR OrthoDB:EOG4XPTQ3
NextBio:977015 Genevestigator:P05066 GermOnline:YOR386W
Uniprot:P05066
Length = 565
Score = 185 (70.2 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 59/197 (29%), Positives = 94/197 (47%)
Query: 95 ETEAMRRLERHLERKAWVASFGRPKMTPQSLLASQTGLSPFLRFGCLSTRLF----YHDL 150
E A+ RL+ L K+ + + K L +GLS ++ G +STRL +
Sbjct: 308 EEAALSRLKDFLGTKS--SKYNNEK--DMLYLGGTSGLSVYITTGRISTRLIVNQAFQSC 363
Query: 151 NK--LYKRIKKAPPPLSLHGQLLWREFF-YCAATRNPNFDRMLGNPI---CVQIPWDVNM 204
N + K +K + ++ WR+F+ +C N + M G P + I W+ N
Sbjct: 364 NGQIMSKALKDNSSTQNFIKEVAWRDFYRHCMC--NWPYTSM-GMPYRLDTLDIKWENNP 420
Query: 205 EALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMKIFDEL 264
A KW TG P +DAIM +L G+I++ +R A FL++ +L + W G + F +
Sbjct: 421 VAFEKWCTGNTGIPIVDAIMRKLLYTGYINNRSRMITASFLSK-NLLIDWRWGERWFMKH 479
Query: 265 LLDADWSVNAGMWMWLS 281
L+D D S N G W + S
Sbjct: 480 LIDGDSSSNVGGWGFCS 496
>UNIPROTKB|Q9KR33 [details] [associations]
symbol:cry1 "Cryptochrome DASH" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 173 (66.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 52/183 (28%), Positives = 81/183 (44%)
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATR-NPNFD 187
T SP+L G +S + Y L + Y+ + A + +LLWRE+FY A R
Sbjct: 236 TKFSPWLALGAVSPKTIYAMLQR-YEAVHGANDSTYWIFFELLWREYFYWYARRYGAKLF 294
Query: 188 RMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
R G I + P + +W + +T FP ++A M QL + G++ + R VA L
Sbjct: 295 RFSG--IGEKKPLTSFYAQRFLQWKHGETPFPIVNACMRQLNQTGYMSNRGRQLVASCLV 352
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNG 306
+L + W G F+ L+D D N G W +L+ + K DP G
Sbjct: 353 H-ELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRGSRQFNLEKQAHTYDPKG 411
Query: 307 DFI 309
+F+
Sbjct: 412 EFV 414
>TIGR_CMR|VC_1814 [details] [associations]
symbol:VC_1814 "RNA-binding cryptochrome Cry1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 173 (66.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 52/183 (28%), Positives = 81/183 (44%)
Query: 130 TGLSPFLRFGCLSTRLFYHDLNKLYKRIKKAPPPLS-LHGQLLWREFFYCAATR-NPNFD 187
T SP+L G +S + Y L + Y+ + A + +LLWRE+FY A R
Sbjct: 236 TKFSPWLALGAVSPKTIYAMLQR-YEAVHGANDSTYWIFFELLWREYFYWYARRYGAKLF 294
Query: 188 RMLGNPICVQIPW-DVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLT 246
R G I + P + +W + +T FP ++A M QL + G++ + R VA L
Sbjct: 295 RFSG--IGEKKPLTSFYAQRFLQWKHGETPFPIVNACMRQLNQTGYMSNRGRQLVASCLV 352
Query: 247 RGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPVKFGRKADPNG 306
+L + W G F+ L+D D N G W +L+ + K DP G
Sbjct: 353 H-ELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRGSRQFNLEKQAHTYDPKG 411
Query: 307 DFI 309
+F+
Sbjct: 412 EFV 414
>ZFIN|ZDB-GENE-120215-243 [details] [associations]
symbol:si:ch73-25i22.2 "si:ch73-25i22.2"
species:7955 "Danio rerio" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
ZFIN:ZDB-GENE-120215-243 GO:GO:0006281 GO:GO:0003913
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:CU929153
Ensembl:ENSDART00000151373 Uniprot:I3ITK7
Length = 316
Score = 164 (62.8 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 31/78 (39%), Positives = 46/78 (58%)
Query: 200 WDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWVSWEEGMK 259
W + L W +TG+P +DA M QL + GW+++ RH VA FL L W+EG +
Sbjct: 4 WSSDHAHLKAWQRGRTGYPLVDAAMRQLWQTGWMNNYMRHVVASFLI-AYLHFPWQEGYR 62
Query: 260 IFDELLLDADWSVNAGMW 277
F + L+DAD +++A MW
Sbjct: 63 WFQDTLVDADVAIDAMMW 80
>TAIR|locus:2138728 [details] [associations]
symbol:CRY1 "cryptochrome 1" species:3702 "Arabidopsis
thaliana" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=NAS]
[GO:0009637 "response to blue light" evidence=RCA;IMP;NAS]
[GO:0009785 "blue light signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0051510 "regulation of
unidimensional cell growth" evidence=IMP] [GO:0004672 "protein
kinase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=RCA;IDA] [GO:0055114 "oxidation-reduction process"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010118 "stomatal movement" evidence=IGI] [GO:0010343 "singlet
oxygen-mediated programmed cell death" evidence=IMP] [GO:0046283
"anthocyanin-containing compound metabolic process" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010075
"regulation of meristem growth" evidence=IGI] [GO:0009583
"detection of light stimulus" evidence=IMP] [GO:0010155 "regulation
of proton transport" evidence=RCA] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009414 GO:GO:0006281 GO:GO:0046777
GO:GO:0009640 GO:GO:0010118 GO:GO:0004672 GO:GO:0018298
GO:GO:0055114 EMBL:AL161513 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AF128396 GO:GO:0010075 GO:GO:0046283 GO:GO:0051510
eggNOG:COG0415 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:S66907 EMBL:S66909
EMBL:AF361588 EMBL:AY124863 IPI:IPI00529765 PIR:H85089 PIR:S39058
RefSeq:NP_567341.1 UniGene:At.27730 PDB:1U3C PDB:1U3D PDBsum:1U3C
PDBsum:1U3D DisProt:DP00474 ProteinModelPortal:Q43125 SMR:Q43125
IntAct:Q43125 MINT:MINT-192438 STRING:Q43125 PaxDb:Q43125
PRIDE:Q43125 EnsemblPlants:AT4G08920.1 GeneID:826470
KEGG:ath:AT4G08920 TAIR:At4g08920 HOGENOM:HOG000245621
InParanoid:Q43125 KO:K12118 OMA:CKVDFWL ProtClustDB:CLSN2681786
EvolutionaryTrace:Q43125 Genevestigator:Q43125 GermOnline:AT4G08920
GO:GO:0010617 GO:GO:0009583 GO:GO:0010343 InterPro:IPR020978
InterPro:IPR014134 Pfam:PF12546 TIGRFAMs:TIGR02766 Uniprot:Q43125
Length = 681
Score = 169 (64.5 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 57/194 (29%), Positives = 94/194 (48%)
Query: 127 ASQTGLSPFLRFGCLSTRLFYHDLNKLYKRIKKA-------PPPLSLHGQLLW-REFFYC 178
A+ + LSP L FG +S R +H L ++ K++ A ++L + + RE+
Sbjct: 245 ATTSFLSPHLHFGEVSVRKVFH-LVRI-KQVAWANEGNEAGEESVNLFLKSIGLREYSRY 302
Query: 179 AATRNP-NFDR-MLGNPICVQIPWDVNMEALAKWANAQTGFPWIDAIMTQLREEGWIHHL 236
+ +P + +R +LG+ PW V+ W +TG+P +DA M +L GW+H
Sbjct: 303 ISFNHPYSHERPLLGH--LKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDR 360
Query: 237 ARHAVACFLTRGDLWVSWEEGMKIFDELLLDADWSVNAGMWMWLSCXXXXXXXXHCYCPV 296
R V+ F + L + W GMK F + LLDAD +A W +++
Sbjct: 361 IRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNP 419
Query: 297 KF-GRKADPNGDFI 309
+F G K DPNG+++
Sbjct: 420 QFEGYKFDPNGEYV 433
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.455 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 309 301 0.00096 115 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 628 (67 KB)
Total size of DFA: 262 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 24.45u 0.09s 24.54t Elapsed: 00:00:18
Total cpu time: 24.46u 0.09s 24.55t Elapsed: 00:00:19
Start: Thu Aug 15 13:27:36 2013 End: Thu Aug 15 13:27:55 2013