BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4181
(73 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V998|UBL5_DROME Ubiquitin-like protein 5 OS=Drosophila melanogaster GN=ubl PE=3
SV=1
Length = 73
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/73 (93%), Positives = 70/73 (95%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGT+ EKIVLKKWYTIFKD IR+ DY
Sbjct: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTKHEKIVLKKWYTIFKDPIRLSDY 60
Query: 61 EIHDGMNLELYYQ 73
EIHDGMNLELYYQ
Sbjct: 61 EIHDGMNLELYYQ 73
>sp|Q791B0|UBL5_PSAOB Ubiquitin-like protein 5 OS=Psammomys obesus GN=UBL5 PE=3 SV=1
Length = 73
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/73 (89%), Positives = 68/73 (93%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIE+ CNDRLGKKVRVKCN DDTIGDLKKLIAAQTGTRW KIVLKKWYTIFKDH+ + DY
Sbjct: 1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60
Query: 61 EIHDGMNLELYYQ 73
EIHDGMNLELYYQ
Sbjct: 61 EIHDGMNLELYYQ 73
>sp|Q9EPV8|UBL5_MOUSE Ubiquitin-like protein 5 OS=Mus musculus GN=Ubl5 PE=1 SV=1
Length = 73
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/73 (89%), Positives = 68/73 (93%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIE+ CNDRLGKKVRVKCN DDTIGDLKKLIAAQTGTRW KIVLKKWYTIFKDH+ + DY
Sbjct: 1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60
Query: 61 EIHDGMNLELYYQ 73
EIHDGMNLELYYQ
Sbjct: 61 EIHDGMNLELYYQ 73
>sp|Q6EGX7|UBL5_MESAU Ubiquitin-like protein 5 OS=Mesocricetus auratus GN=UBL5 PE=3
SV=1
Length = 73
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/73 (89%), Positives = 68/73 (93%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIE+ CNDRLGKKVRVKCN DDTIGDLKKLIAAQTGTRW KIVLKKWYTIFKDH+ + DY
Sbjct: 1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60
Query: 61 EIHDGMNLELYYQ 73
EIHDGMNLELYYQ
Sbjct: 61 EIHDGMNLELYYQ 73
>sp|Q9BZL1|UBL5_HUMAN Ubiquitin-like protein 5 OS=Homo sapiens GN=UBL5 PE=1 SV=1
Length = 73
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/73 (89%), Positives = 68/73 (93%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIE+ CNDRLGKKVRVKCN DDTIGDLKKLIAAQTGTRW KIVLKKWYTIFKDH+ + DY
Sbjct: 1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60
Query: 61 EIHDGMNLELYYQ 73
EIHDGMNLELYYQ
Sbjct: 61 EIHDGMNLELYYQ 73
>sp|Q3T0Z3|UBL5_BOVIN Ubiquitin-like protein 5 OS=Bos taurus GN=UBL5 PE=3 SV=1
Length = 73
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/73 (89%), Positives = 68/73 (93%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIE+ CNDRLGKKVRVKCN DDTIGDLKKLIAAQTGTRW KIVLKKWYTIFKDH+ + DY
Sbjct: 1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60
Query: 61 EIHDGMNLELYYQ 73
EIHDGMNLELYYQ
Sbjct: 61 EIHDGMNLELYYQ 73
>sp|P91302|UBL5_CAEEL Ubiquitin-like protein 5 OS=Caenorhabditis elegans GN=ubl-5 PE=3
SV=1
Length = 73
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/73 (87%), Positives = 68/73 (93%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIEIT NDRLGKKVR+KCNP DTIGDLKKLIAAQTGTRWEKIVLKKWYTI+KDHI +MDY
Sbjct: 1 MIEITVNDRLGKKVRIKCNPSDTIGDLKKLIAAQTGTRWEKIVLKKWYTIYKDHITLMDY 60
Query: 61 EIHDGMNLELYYQ 73
EIH+G N ELYYQ
Sbjct: 61 EIHEGFNFELYYQ 73
>sp|Q7SXF2|UBL5_DANRE Ubiquitin-like protein 5 OS=Danio rerio GN=ubl5 PE=3 SV=1
Length = 73
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/72 (87%), Positives = 68/72 (94%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIE+ CNDRLGKKVRVKCN +DTIGDLKKLIAAQTGTRWEKIVLKKWYTIFK+H+ + DY
Sbjct: 1 MIEVVCNDRLGKKVRVKCNQEDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKNHVSLGDY 60
Query: 61 EIHDGMNLELYY 72
EIHDGMNLELYY
Sbjct: 61 EIHDGMNLELYY 72
>sp|Q9FGZ9|UBL5_ARATH Ubiquitin-like protein 5 OS=Arabidopsis thaliana GN=UBL5 PE=1
SV=1
Length = 73
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 63/73 (86%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIE+ NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR EKI ++KWY I+KDHI + DY
Sbjct: 1 MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
Query: 61 EIHDGMNLELYYQ 73
EIHDGM LELYY
Sbjct: 61 EIHDGMGLELYYN 73
>sp|O94650|HUB1_SCHPO Ubiquitin-like modifier hub1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hub1 PE=1 SV=1
Length = 73
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 64/73 (87%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIE+ CNDRLGKKVRVKC PDDT+GD KKL+AAQTGT +IVLKKW+++FKD+I + DY
Sbjct: 1 MIEVLCNDRLGKKVRVKCMPDDTVGDFKKLVAAQTGTDPRRIVLKKWHSVFKDNITLADY 60
Query: 61 EIHDGMNLELYYQ 73
EIHDGM+LE+YY
Sbjct: 61 EIHDGMSLEMYYS 73
>sp|Q6BUP7|HUB1_DEBHA Ubiquitin-like modifier HUB1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=HUB1 PE=4 SV=1
Length = 73
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 59/73 (80%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIE+ NDRLGKK++VKC P DTIGDLKK+I+ Q GT +EKIVLKK Y ++KDHI + DY
Sbjct: 1 MIEVLANDRLGKKIKVKCMPTDTIGDLKKIISLQIGTSYEKIVLKKGYQVYKDHITLDDY 60
Query: 61 EIHDGMNLELYYQ 73
E+H+G N ELYY
Sbjct: 61 EVHNGFNFELYYS 73
>sp|Q54Q03|UBL5_DICDI Ubiquitin-like protein 5 OS=Dictyostelium discoideum GN=ubl5 PE=3
SV=2
Length = 67
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 6/73 (8%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIE+ CNDRLG KVRVK N DDTIGDLKK+++AQ G + EKI L+K Y+IFKDH
Sbjct: 1 MIEVVCNDRLGNKVRVKVNSDDTIGDLKKVLSAQIGIKAEKIRLQKSYSIFKDH------ 54
Query: 61 EIHDGMNLELYYQ 73
EIHDG LELYY
Sbjct: 55 EIHDGDGLELYYN 67
>sp|Q6Q546|HUB1_YEAST Ubiquitin-like modifier HUB1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HUB1 PE=1 SV=2
Length = 73
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 56/72 (77%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIE+ NDRLGKKVRVKC +D++GD KK+++ Q GT+ KIVL+K ++ KDHI + DY
Sbjct: 1 MIEVVVNDRLGKKVRVKCLAEDSVGDFKKVLSLQIGTQPNKIVLQKGGSVLKDHISLEDY 60
Query: 61 EIHDGMNLELYY 72
E+HD NLELYY
Sbjct: 61 EVHDQTNLELYY 72
>sp|Q6FIX7|HUB1_CANGA Ubiquitin-like modifier HUB1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=HUB1 PE=4 SV=1
Length = 73
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 55/73 (75%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIE+ NDRLGKK+RVKC DDT+GD KK+++ Q G + KIVL+K ++ KDHI + DY
Sbjct: 1 MIEVLVNDRLGKKIRVKCLEDDTVGDFKKVLSVQLGMQPSKIVLQKGGSVLKDHITLYDY 60
Query: 61 EIHDGMNLELYYQ 73
E+HD NLELYY
Sbjct: 61 EVHDNTNLELYYS 73
>sp|Q6CU12|HUB1_KLULA Ubiquitin-like modifier HUB1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=HUB1 PE=4 SV=1
Length = 74
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGT-RWEKIVLKKWYTIFKDHIRIMD 59
MIE+ NDRLGKKV VKC +DT+GD KK+++ Q GT KIVL+K ++ KDHI + D
Sbjct: 1 MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLED 60
Query: 60 YEIHDGMNLELYY 72
YE+HDG NLELYY
Sbjct: 61 YEVHDGTNLELYY 73
>sp|Q756X3|HUB1_ASHGO Ubiquitin-like modifier HUB1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=HUB1
PE=4 SV=1
Length = 73
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 51/72 (70%)
Query: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDY 60
MIE+ NDRLGKK+RVKC D++GDLKK++A Q GT K+ L K KDHI + DY
Sbjct: 1 MIEVIVNDRLGKKLRVKCLSTDSVGDLKKVLAVQLGTAHGKVALHKGGVNLKDHISLDDY 60
Query: 61 EIHDGMNLELYY 72
E+HDG LELYY
Sbjct: 61 EVHDGTYLELYY 72
>sp|Q24R88|ADEC_DESHY Adenine deaminase OS=Desulfitobacterium hafniense (strain Y51)
GN=ade PE=3 SV=1
Length = 569
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 26 DLKKLIAAQTGTRWEKIVLKKWYTI--FKDHIRIMDYEIHDGM 66
DLKKL A G ++VLK I F + I + D + DGM
Sbjct: 5 DLKKLTAKSLGREKAELVLKNAQVINVFSEEILVRDVAVGDGM 47
>sp|Q39256|UBQ8_ARATH Polyubiquitin 8 OS=Arabidopsis thaliana GN=UBQ8 PE=3 SV=1
Length = 631
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 11 GKKVRVKCNPDDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKDHIRIMDYEIHDGMNLEL 70
GK + ++ DTI ++K+ I + G + ++ +L + +D + + DY+IH L L
Sbjct: 561 GKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYL 620
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,157,287
Number of Sequences: 539616
Number of extensions: 888871
Number of successful extensions: 2478
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2457
Number of HSP's gapped (non-prelim): 21
length of query: 73
length of database: 191,569,459
effective HSP length: 45
effective length of query: 28
effective length of database: 167,286,739
effective search space: 4684028692
effective search space used: 4684028692
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)