BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4188
(98 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|270004900|gb|EFA01348.1| RecQ4 [Tribolium castaneum]
Length = 1373
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
Query: 2 LKSKLRRYFQDENDVDATA-PEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
LK+K+R YF+ N ++A + E +L EDL++++I L+ +YRD +FTGR++ARIFHGI
Sbjct: 1115 LKTKIRDYFESPNPLEAISLKENQLVDEDLVVNNIRGLICTYRDNSFTGRAVARIFHGIS 1174
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+PA+++GR +YWR H++ DF +CKLA +E++ R
Sbjct: 1175 SPNYPAVIWGRCKYWRCHINVDFHTICKLATKEILAYR 1212
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Query: 2 LKSKLRRYFQDENDVDATA-PEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
LK+K+R YF+ N ++ + E +L EDL++++I L+ +YRD +FTGR++ARIFHGI
Sbjct: 1276 LKTKIRDYFESPNPLEVISLKENQLVDEDLVVNNIRGLICTYRDNSFTGRAVARIFHGIS 1335
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+PA+++GR +YWR H++ DF +CKLA +E++ R
Sbjct: 1336 SPNYPAVIWGRCKYWRCHINVDFHTICKLATKEILAYR 1373
>gi|91079778|ref|XP_967578.1| PREDICTED: similar to rothmund-thomson syndrome DNA helicase recq4
[Tribolium castaneum]
Length = 1368
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
Query: 2 LKSKLRRYFQDENDVDATA-PEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
LK+K+R YF+ N ++A + E +L EDL++++I L+ +YRD +FTGR++ARIFHGI
Sbjct: 1110 LKTKIRDYFESPNPLEAISLKENQLVDEDLVVNNIRGLICTYRDNSFTGRAVARIFHGIS 1169
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+PA+++GR +YWR H++ DF +CKLA +E++ R
Sbjct: 1170 SPNYPAVIWGRCKYWRCHINVDFHTICKLATKEILAYR 1207
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Query: 2 LKSKLRRYFQDENDVDATA-PEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
LK+K+R YF+ N ++ + E +L EDL++++I L+ +YRD +FTGR++ARIFHGI
Sbjct: 1271 LKTKIRDYFESPNPLEVISLKENQLVDEDLVVNNIRGLICTYRDNSFTGRAVARIFHGIS 1330
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+PA+++GR +YWR H++ DF +CKLA +E++ R
Sbjct: 1331 SPNYPAVIWGRCKYWRCHINVDFHTICKLATKEILAYR 1368
>gi|307206664|gb|EFN84636.1| ATP-dependent DNA helicase Q4 [Harpegnathos saltator]
Length = 1553
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
Query: 2 LKSKLRRYFQDENDVDAT--APEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGI 59
LK +R+YFQ ++ +D + + K+ E + +D+ SLV YRDT FTGR++ARIFHGI
Sbjct: 1455 LKDTIRKYFQSDSPLDNVDISFQDKVPNEHQIAADVRSLVLCYRDTKFTGRAVARIFHGI 1514
Query: 60 PSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+PA+++GR R+WR+H+ +F +C++AA+E++ LR
Sbjct: 1515 QSPNYPAMIWGRCRFWRAHLAANFNGICRIAAKEILALR 1553
>gi|332026607|gb|EGI66716.1| ATP-dependent DNA helicase Q4 [Acromyrmex echinatior]
Length = 1518
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 70/101 (69%), Gaps = 6/101 (5%)
Query: 2 LKSKLRRYFQDENDVDATAPEI----KLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFH 57
LK +R YFQ ++ ++ P I K+T E + D+ +L+ YRDT FTGR+IARIFH
Sbjct: 1420 LKDTIREYFQSDSSLND--PNISFQNKMTNEQQIAVDVRNLIICYRDTKFTGRAIARIFH 1477
Query: 58 GIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
GI SPN+PA+++ R R+WR H+ DF +CK+AARE++ LR
Sbjct: 1478 GIQSPNYPALIWHRCRFWRIHIAADFNTICKIAAREILALR 1518
>gi|170042657|ref|XP_001849034.1| rothmund-thomson syndrome DNA helicase recq4 [Culex quinquefasciatus]
gi|167866161|gb|EDS29544.1| rothmund-thomson syndrome DNA helicase recq4 [Culex quinquefasciatus]
Length = 1527
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/98 (43%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 2 LKSKLRRYFQDENDVDAT-APEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
LK +R YFQ + DVD PE T + L+SDI ++++ Y + NF+GR+IAR+FHG+
Sbjct: 1429 LKQIVRTYFQSDLDVDVELVPEPDDTPDTQLLSDIRTMIHRYPENNFSGRAIARVFHGVQ 1488
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+PA+++GR+ +WR+H DF + +LA E++++R
Sbjct: 1489 SPNYPAVIWGRSNFWRAHTSVDFNRIVRLANAEIVRMR 1526
>gi|322798352|gb|EFZ20087.1| hypothetical protein SINV_13455 [Solenopsis invicta]
Length = 1309
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
Query: 2 LKSKLRRYFQDE--NDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGI 59
LK +R YFQ + N++D + ++T E + +D+ SL+ Y+DT FTGR++ARIFHGI
Sbjct: 1212 LKHTIREYFQLDSLNNLDINF-QNEVTNEQQIATDVRSLIIHYKDTKFTGRAVARIFHGI 1270
Query: 60 PSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+PAI++ R R+WR H+ DF +CK+A +E++ LR
Sbjct: 1271 QSPNYPAIIWNRCRFWRVHIASDFNTICKIATKEILALR 1309
>gi|307178096|gb|EFN66923.1| ATP-dependent DNA helicase Q4 [Camponotus floridanus]
Length = 1534
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 72/100 (72%), Gaps = 4/100 (4%)
Query: 2 LKSKLRRYFQDE---NDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHG 58
LK+ +R YFQ + N+ D + K+T E+ + +D+ +L+ YRDT FTGR++ARIFHG
Sbjct: 1436 LKNIIRDYFQSDSPLNNADIGFQD-KVTNEEQIAADVRNLIIRYRDTKFTGRAVARIFHG 1494
Query: 59 IPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
I SPN+PA+++ + R+WR H+ +F ++CK+A RE++ LR
Sbjct: 1495 IQSPNYPALIWSKCRFWRVHIAANFNVICKIATREILALR 1534
>gi|383866069|ref|XP_003708494.1| PREDICTED: ATP-dependent DNA helicase Q4-like [Megachile rotundata]
Length = 1494
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 2 LKSKLRRYFQDENDVDATA-PEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
LK+ +R YF+ + VD A ++K+ E + D+ +L+ SYRD NFTGR++ARIFHGI
Sbjct: 1397 LKAIIRDYFEGKVLVDIDAIQQVKVENEAQIACDVRNLIVSYRDNNFTGRAVARIFHGIQ 1456
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+PA + + R+WR+H+ +F LC++A +E++ LR
Sbjct: 1457 SPNYPAYAWNKCRFWRAHLSCNFSTLCQIATKEILALR 1494
>gi|170068621|ref|XP_001868938.1| rothmund-thomson syndrome DNA helicase recq4 [Culex quinquefasciatus]
gi|167864601|gb|EDS27984.1| rothmund-thomson syndrome DNA helicase recq4 [Culex quinquefasciatus]
Length = 1093
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 2 LKSKLRRYFQDENDVDAT-APEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
LK +R YFQ + DVD PE T + L+SDI ++++ Y + NF+GR+IAR+FHG+
Sbjct: 995 LKQIVRTYFQSDLDVDVELVPEPDDTPDTQLLSDIRTMIHRYPENNFSGRAIARVFHGVQ 1054
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+PA+++GR+ +WR+H DF + +LA E++++R
Sbjct: 1055 SPNYPAVIWGRSNFWRAHTSVDFNRIVRLANAEIVRMR 1092
>gi|350396812|ref|XP_003484675.1| PREDICTED: ATP-dependent DNA helicase Q4-like [Bombus impatiens]
Length = 1542
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 3/100 (3%)
Query: 1 MLKSKLRRYFQDEN--DVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHG 58
LK +R YF+ + D+D T + + E + D+ +L+ SYRD NFTGR++ARIFHG
Sbjct: 1444 QLKDVIRNYFEGKVLLDIDLTQQNV-MENEAQVACDVRNLIVSYRDNNFTGRAVARIFHG 1502
Query: 59 IPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
I SPN+PA ++ + R+WR+H+ DF LC++A RE++ LR
Sbjct: 1503 IQSPNYPAYIWNKCRFWRAHISFDFNALCQIATREILALR 1542
>gi|380019761|ref|XP_003693771.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q4-like
[Apis florea]
Length = 1499
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
Query: 2 LKSKLRRYFQDEN--DVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGI 59
LK +R YF E D+D I + E + D+ +L+ SYRD NFTGR++ARIFHGI
Sbjct: 1402 LKDVIRSYFDGEVLLDIDFNKQNI-MENEAQIACDVRNLIVSYRDNNFTGRAVARIFHGI 1460
Query: 60 PSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+PA V+ + R+WR H+ +F +LC++A +E++ LR
Sbjct: 1461 QSPNYPAYVWNKCRFWRVHLSCNFNVLCQIATKEILALR 1499
>gi|328777915|ref|XP_393782.4| PREDICTED: ATP-dependent DNA helicase Q4 [Apis mellifera]
Length = 1505
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
Query: 2 LKSKLRRYFQDEN--DVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGI 59
LK +R YF E D+D I + E + DI +L+ SYRD NFTGR++ARIFHGI
Sbjct: 1408 LKDVIRSYFDGEVLLDIDFNKQNI-MENEAQIACDIRNLIVSYRDNNFTGRAVARIFHGI 1466
Query: 60 PSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+PA V+ + R+WR H+ +F +LC++A +E++ LR
Sbjct: 1467 QSPNYPAYVWNKCRFWRIHLSCNFNVLCQIATKEILALR 1505
>gi|390176355|ref|XP_001354213.2| GA20388 [Drosophila pseudoobscura pseudoobscura]
gi|388858726|gb|EAL31265.2| GA20388 [Drosophila pseudoobscura pseudoobscura]
Length = 1558
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Query: 1 MLKSKLRRYFQDENDVDATAP-EIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGI 59
LK+ +R YF ++ D E ++ ++ D+HSL+N Y D FTGR+IARIFHGI
Sbjct: 1459 QLKAIVRNYFLNDYPQDLELEIEPSNVPDESIVDDVHSLINMYPDNTFTGRNIARIFHGI 1518
Query: 60 PSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+PA+++GR ++WR+HM DF + +LA +E+IK R
Sbjct: 1519 TSPNYPAVMWGRCKFWRAHMKVDFNRILQLANQEIIKRR 1557
>gi|260797928|ref|XP_002593952.1| hypothetical protein BRAFLDRAFT_68613 [Branchiostoma floridae]
gi|229279185|gb|EEN49963.1| hypothetical protein BRAFLDRAFT_68613 [Branchiostoma floridae]
Length = 606
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 9/107 (8%)
Query: 1 MLKSKLRRYFQDENDVDATA--------PEIKLTKEDLLISDIHSLVNSYRDTNFTGRSI 52
LK LR YF+ E ++ ++ ++ L E + +DI S V + D NFTGR+I
Sbjct: 433 QLKVTLREYFEKEPTLNVSSDSCGEEQEEQVPLKNEGQVRADIRSFVCLHHDRNFTGRAI 492
Query: 53 ARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
ARIFHGI SP +PA V+GR+ RYWRSH+D DF L +LA EL+++R
Sbjct: 493 ARIFHGITSPCYPAQVWGRDRRYWRSHLDVDFNQLRRLAVEELVRIR 539
>gi|260810139|ref|XP_002599861.1| hypothetical protein BRAFLDRAFT_95551 [Branchiostoma floridae]
gi|229285144|gb|EEN55873.1| hypothetical protein BRAFLDRAFT_95551 [Branchiostoma floridae]
Length = 133
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 9/107 (8%)
Query: 1 MLKSKLRRYFQDENDVDATA--------PEIKLTKEDLLISDIHSLVNSYRDTNFTGRSI 52
LK LR YF+ E ++ ++ ++ L E + +DI S V + D NFTGR+I
Sbjct: 26 QLKVTLREYFEKEPTLNVSSDSCEEEEEEQVPLKNEGQVRADIRSFVCLHHDRNFTGRAI 85
Query: 53 ARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
ARIFHGI SP +PA V+GR+ RYWRSH+D DF L +LA EL+++R
Sbjct: 86 ARIFHGISSPCYPAQVWGRDRRYWRSHLDVDFNQLRRLAVEELVRIR 132
>gi|260810135|ref|XP_002599859.1| hypothetical protein BRAFLDRAFT_95549 [Branchiostoma floridae]
gi|229285142|gb|EEN55871.1| hypothetical protein BRAFLDRAFT_95549 [Branchiostoma floridae]
Length = 196
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 9/106 (8%)
Query: 2 LKSKLRRYFQDENDVDATA--------PEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIA 53
LK LR YF+ E ++ ++ ++ L E + +DI S V + D NFTGR+IA
Sbjct: 90 LKVTLREYFEKEPTLNVSSDSCEEEEEEQVPLKNEGQVRADIRSFVCLHHDRNFTGRAIA 149
Query: 54 RIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
RIFHGI SP +PA V+GR+ RYWRSH+D DF L +LA EL+++R
Sbjct: 150 RIFHGISSPCYPAQVWGRDRRYWRSHLDVDFNQLRRLAVEELVRIR 195
>gi|260810147|ref|XP_002599865.1| hypothetical protein BRAFLDRAFT_95555 [Branchiostoma floridae]
gi|229285148|gb|EEN55877.1| hypothetical protein BRAFLDRAFT_95555 [Branchiostoma floridae]
Length = 503
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 9/106 (8%)
Query: 2 LKSKLRRYFQDENDVDATA--------PEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIA 53
LK LR YF+ E ++ ++ ++ L E + +DI S V + D NFTGR+IA
Sbjct: 397 LKVTLREYFEKEPTLNVSSDSCGEEEEEQVPLKNEGQVRADICSFVCLHHDRNFTGRAIA 456
Query: 54 RIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
RIFHGI SP +PA V+GR+ RYWRSH+D DF L +LA EL+++R
Sbjct: 457 RIFHGITSPCYPAQVWGRDRRYWRSHLDVDFNQLRRLAVEELVRIR 502
>gi|357624753|gb|EHJ75407.1| rothmund-thomson syndrome DNA helicase recq4 [Danaus plexippus]
Length = 641
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 69/102 (67%), Gaps = 9/102 (8%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKE-----DLLISDIHSLVNSYRDTNFTGRSIARIF 56
LK + YF EN++ PE K +E + + SD+ +L+ +Y+D FTGRSIARIF
Sbjct: 543 LKLIINDYFTRENNM----PENKQFQERPLDTERITSDVRALIATYKDCKFTGRSIARIF 598
Query: 57 HGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
GI SPN+PA+V+GR ++WRSH+ +DF + ++A +++I ++
Sbjct: 599 QGITSPNYPALVWGRCKFWRSHLHEDFNGIIRIATQQIINMK 640
>gi|157127702|ref|XP_001661140.1| rothmund-thomson syndrome DNA helicase recq4 [Aedes aegypti]
gi|108872839|gb|EAT37064.1| AAEL010904-PA [Aedes aegypti]
Length = 1134
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 2 LKSKLRRYFQDE--NDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGI 59
LK+ +R YFQ + N+ PE+ T ++ L++DI +L++ Y + NF+GR++ARIFHG+
Sbjct: 1035 LKTIVREYFQTDISNEEIELVPELDDTPDNQLLNDIRTLIHRYPENNFSGRAVARIFHGV 1094
Query: 60 PSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+PA+++ R ++WR++ DF + ++A E++++R
Sbjct: 1095 QSPNYPAVIWFRCQFWRAYTSVDFNRIVRMANAEIVRMR 1133
>gi|7229681|gb|AAF42939.1|AF233659_1 RECQ4 [Drosophila melanogaster]
Length = 1530
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 67/102 (65%), Gaps = 7/102 (6%)
Query: 1 MLKSKLRRYFQDENDVDATAPEIKLTKEDL----LISDIHSLVNSYRDTNFTGRSIARIF 56
LK+ +R YF ++ D E+++ ++ +I D+H+L+N Y D FTGR+IARIF
Sbjct: 1431 QLKAIVRNYFANDYPQDL---ELEIEPSNVPDENIIDDVHALINMYPDNTFTGRNIARIF 1487
Query: 57 HGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
HGI SPN+PA+++GR ++WR+H+ DF + LA +IK R
Sbjct: 1488 HGIMSPNYPAVIWGRCKFWRAHVKVDFNRILHLANMAIIKRR 1529
>gi|21358123|ref|NP_652607.1| RecQ4 [Drosophila melanogaster]
gi|7295152|gb|AAF50477.1| RecQ4 [Drosophila melanogaster]
Length = 1579
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 67/102 (65%), Gaps = 7/102 (6%)
Query: 1 MLKSKLRRYFQDENDVDATAPEIKLTKEDL----LISDIHSLVNSYRDTNFTGRSIARIF 56
LK+ +R YF ++ D E+++ ++ +I D+H+L+N Y D FTGR+IARIF
Sbjct: 1480 QLKAIVRNYFANDYPQDL---ELEIEPSNVPDENIIDDVHALINMYPDNTFTGRNIARIF 1536
Query: 57 HGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
HGI SPN+PA+++GR ++WR+H+ DF + LA +IK R
Sbjct: 1537 HGIMSPNYPAVIWGRCKFWRAHVKVDFNRILHLANMAIIKRR 1578
>gi|242023841|ref|XP_002432339.1| ATP-dependent DNA helicase Q4, putative [Pediculus humanus corporis]
gi|212517762|gb|EEB19601.1| ATP-dependent DNA helicase Q4, putative [Pediculus humanus corporis]
Length = 1250
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 65/98 (66%), Gaps = 5/98 (5%)
Query: 2 LKSKLRRYFQDENDVDATAP----EIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFH 57
LK+++RRYF+ E + P +I+ E+++ +D+ +L+N+YRD F R++ARIFH
Sbjct: 1150 LKNEIRRYFETEK-ISEEIPLKNFQIEKFDEEIVANDVRTLLNTYRDNTFNARAVARIFH 1208
Query: 58 GIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELI 95
GI SPN+ A + +YWR H+D+DF L +A RE++
Sbjct: 1209 GIQSPNYLASTWYNCKYWRKHLDKDFNELLTIAKREIL 1246
>gi|321475032|gb|EFX85996.1| DNA helicase RecQ4 [Daphnia pulex]
Length = 1253
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 4/101 (3%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKL---TKEDLLISDIHSLVNSYRDTNFTGRSIARIFHG 58
L+S ++ YF++E E+ L +E + + I SL+ +YRD FT RSIARI HG
Sbjct: 1153 LRSFIKDYFEEEAGACQPVEEVVLCPDNQEQFIRATIRSLILNYRDQTFTARSIARILHG 1212
Query: 59 IPSPNFPAIVFGRNR-YWRSHMDQDFGLLCKLAARELIKLR 98
I SP +PA ++G+ R +WR+ + QDF LL ++ A+EL+ L+
Sbjct: 1213 ISSPCYPAEIWGKARQHWRAQLHQDFNLLVRMGAQELLALK 1253
>gi|340373231|ref|XP_003385145.1| PREDICTED: ATP-dependent DNA helicase Q4-like [Amphimedon
queenslandica]
Length = 1050
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 52/73 (71%)
Query: 26 TKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDFGL 85
T +++LI DIH L+ Y D FTGR+IAR+FHGI SP +PA V+G +WR H+D DF
Sbjct: 977 TSDEILIRDIHVLMGMYPDNQFTGRAIARVFHGIGSPCYPADVWGSCPFWRKHLDCDFYH 1036
Query: 86 LCKLAARELIKLR 98
+C +A +++I+ +
Sbjct: 1037 VCDIATKQIIQTK 1049
>gi|156358666|ref|XP_001624637.1| predicted protein [Nematostella vectensis]
gi|156211429|gb|EDO32537.1| predicted protein [Nematostella vectensis]
Length = 714
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 20/117 (17%)
Query: 2 LKSKLRRYFQDE---------------NDVDATAPEIK----LTKEDLLISDIHSLVNSY 42
LK+ +++YF D N+ DA AP+ + L D + DI +L+ +
Sbjct: 598 LKTIIKKYFDDRTNATEKALRDIQERRNNPDAYAPKPENSDDLVNWDCVSRDIRTLLGIH 657
Query: 43 RDTNFTGRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
D +FTGR++ARIFHGI SP +PA V+GR+ R+WR H++ DF L K A REL+K R
Sbjct: 658 HDHSFTGRAVARIFHGIDSPCYPAAVWGRDRRFWRKHLNVDFNRLRKFALRELLKFR 714
>gi|241857693|ref|XP_002416110.1| rothmund-thomson syndrome DNA helicase recq4, putative [Ixodes
scapularis]
gi|215510324|gb|EEC19777.1| rothmund-thomson syndrome DNA helicase recq4, putative [Ixodes
scapularis]
Length = 902
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 15/112 (13%)
Query: 2 LKSKLRRYFQDEND-----VDATAPEIK------LTKEDLLIS---DIHSLVNSYRDTNF 47
LK + +YF +E D D + P + D+++S DI SLV ++RD F
Sbjct: 791 LKQLIHQYFNEELDPSEAEEDNSPPSVSSGGLHCAINLDIVVSLQRDIRSLVGTHRDHTF 850
Query: 48 TGRSIARIFHGIPSPNFPAIVFGR-NRYWRSHMDQDFGLLCKLAARELIKLR 98
GR++ARIFHGI SP FPA V+GR +R+WRS++D DF + ++A REL+ R
Sbjct: 851 NGRAVARIFHGIASPCFPAQVWGRVHRFWRSNLDIDFNAIVRIANRELVSFR 902
>gi|391330478|ref|XP_003739687.1| PREDICTED: ATP-dependent DNA helicase Q4-like [Metaseiulus
occidentalis]
Length = 1391
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Query: 2 LKSKLRRYFQDEN---DVDATAPEIKLTKE-DLLISDIHSLVNSYRDTNFTGRSIARIFH 57
LK + YF +E ++D E+ + D + DI SL++S D F+GR++ARI H
Sbjct: 1287 LKRLIEAYFHEEPLGIEIDEFFNELSTDYDADFVRGDIRSLIHSQPDQTFSGRAVARILH 1346
Query: 58 GIPSPNFPAIVFGR-NRYWRSHMDQDFGLLCKLAARELIKLR 98
GIPSPN+PA V+GR R WRSHM+ DF L K+A E++ R
Sbjct: 1347 GIPSPNYPAQVWGRLRRVWRSHMEVDFPSLVKIANEEIVSWR 1388
>gi|443728287|gb|ELU14701.1| hypothetical protein CAPTEDRAFT_176954 [Capitella teleta]
Length = 853
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/68 (57%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Query: 33 SDIHSLVNSYR-DTNFTGRSIARIFHGIPSPNFPAIVFGRNR-YWRSHMDQDFGLLCKLA 90
+DI + V+ Y + N TGRSIARIFHGIPSPNFPA V+GR R +WRSH+ DF +L +LA
Sbjct: 786 ADIRAFVHLYSSEHNLTGRSIARIFHGIPSPNFPADVWGRVRKFWRSHLGVDFNILRRLA 845
Query: 91 ARELIKLR 98
+EL+ ++
Sbjct: 846 TQELVYMK 853
>gi|158294994|ref|XP_315948.4| AGAP005917-PA [Anopheles gambiae str. PEST]
gi|157015824|gb|EAA11913.5| AGAP005917-PA [Anopheles gambiae str. PEST]
Length = 1566
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Query: 2 LKSKLRRYFQDE--NDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGI 59
LK+ +R YF + + PE T ++ LI+DI + + Y + NFTGR+IAR+FHG+
Sbjct: 1467 LKTIVREYFTTDISKEQIEIVPEPDDTTDEQLINDIRTAICRYPENNFTGRAIARLFHGV 1526
Query: 60 PSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SPN+ A+V+ R+ +WR++ DF + +LA E++++R
Sbjct: 1527 QSPNYTALVWSRSNFWRAYTKTDFNRIVRLANAEIVRMR 1565
>gi|312380577|gb|EFR26533.1| hypothetical protein AND_07337 [Anopheles darlingi]
Length = 660
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 55/73 (75%)
Query: 26 TKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDFGL 85
T ++ L++DI +++ YR+ NF+GR+IARIFHG+ SPN+ AI++ R+ +WRS+ DF
Sbjct: 587 TTDEQLVTDIRTMICRYRENNFSGRAIARIFHGVQSPNYTAIIWSRSNFWRSYTKTDFNR 646
Query: 86 LCKLAARELIKLR 98
+ +LA E+++++
Sbjct: 647 IVRLANAEIVRMK 659
>gi|328722517|ref|XP_001944049.2| PREDICTED: ATP-dependent DNA helicase Q4-like [Acyrthosiphon pisum]
Length = 1217
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Query: 2 LKSKLRRYFQDEND---VDATAPEIKL--TKEDLLISDIHSLVNSYRDTNFTGRSIARIF 56
LK+ +R YF +N + EI L T E + SD++ + N+Y D T R+IARIF
Sbjct: 1114 LKNSVREYFTVDNLSMLIQKPHEEIVLNETDETRIASDVNRIFNNYIDCKLTARAIARIF 1173
Query: 57 HGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELI 95
HG+ SPNFPA V+GR+ +WR H+ +F + K+A +++I
Sbjct: 1174 HGVESPNFPAYVWGRSPFWRIHIKTNFNAVSKIAQKQII 1212
>gi|410988000|ref|XP_004000277.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q4 [Felis
catus]
Length = 1204
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 8/102 (7%)
Query: 2 LKSKLRRYFQDEND---VDATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRSIAR 54
LK L YF++E D PE + ED + DI L++S+ D F+GR++AR
Sbjct: 1099 LKVLLSGYFEEEGPGGMEDEQGPEPGQARIQDWEDQIRQDIRHLLSSWPDQQFSGRAVAR 1158
Query: 55 IFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELI 95
IFHGI SP +PA V+GR+ R+WR H+ F L +LA E++
Sbjct: 1159 IFHGIGSPCYPAQVYGRDRRFWRKHLHLSFHALMRLATEEIL 1200
>gi|348530118|ref|XP_003452558.1| PREDICTED: ATP-dependent DNA helicase Q4-like [Oreochromis niloticus]
Length = 1581
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 10/107 (9%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTK---------EDLLISDIHSLVNSYRDTNFTGRSI 52
LKS L YF D D L + ED + +DI S +++ D F+GR++
Sbjct: 1475 LKSLLSEYFDKRRDGDHALKPFDLEELDKYKLLDWEDQIRADIRSFLSNRSDEKFSGRAV 1534
Query: 53 ARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
ARIFHGI SP +PA +G++ RYWR ++ DF L +LA +E+I+ +
Sbjct: 1535 ARIFHGIGSPCYPAQTYGKDRRYWRKYIQFDFNQLIRLATQEIIRFK 1581
>gi|311253251|ref|XP_003125487.1| PREDICTED: ATP-dependent DNA helicase Q4 [Sus scrofa]
Length = 1204
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 65/103 (63%), Gaps = 9/103 (8%)
Query: 2 LKSKLRRYFQDEN----DVDATAPEI-KLTKEDL---LISDIHSLVNSYRDTNFTGRSIA 53
LK+ LRRYF++E +D PE + T +D + DI L++S+ + F+GR++A
Sbjct: 1098 LKALLRRYFEEEEAGPEGMDQQGPEPGQATLQDWEAQIRRDIRHLLSSWPEQQFSGRAVA 1157
Query: 54 RIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELI 95
R+FHGI SP +PA V+GR+ R+WR ++ +F L LA E++
Sbjct: 1158 RVFHGIGSPRYPAQVYGRDRRFWRKYLHLNFHALMHLATEEIL 1200
>gi|118404652|ref|NP_001072882.1| RecQ protein-like 4 [Xenopus (Silurana) tropicalis]
gi|116487444|gb|AAI25689.1| hypothetical protein MGC145453 [Xenopus (Silurana) tropicalis]
Length = 1520
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 9/106 (8%)
Query: 2 LKSKLRRYFQDE-------NDVDATAPEIKLTK-EDLLISDIHSLVNSYRDTNFTGRSIA 53
LK+ L YF+ D D EIKL + +D + SDI ++ +++ F+GR++A
Sbjct: 1415 LKALLWEYFEKRVTEEAKVEDPDEELREIKLQESKDQVRSDIRHFLSIHQEERFSGRALA 1474
Query: 54 RIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
RIFHGI SP +PA VFGR+ R+WR ++ DF L L+ E+I+L+
Sbjct: 1475 RIFHGIGSPCYPAQVFGRDRRFWRKYIHLDFNELMNLSKEEIIRLK 1520
>gi|405968110|gb|EKC33210.1| ATP-dependent DNA helicase Q4 [Crassostrea gigas]
Length = 134
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 6 LRRYFQDENDVDATAPEIKLTKEDLLISDIHSLVNSY-RDTNFTGRSIARIFHGIPSPNF 64
L + Q E D P + + I+DI L++ + + F GR+IARIFHGI SP F
Sbjct: 42 LTEFKQREEGQDEKQPSPQEVSQ--AIADIRQLISLHGHEHRFNGRAIARIFHGISSPCF 99
Query: 65 PAIVFGR-NRYWRSHMDQDFGLLCKLAARELIKLR 98
PA +GR R+WRS+M+ DF L KLA +E+IKLR
Sbjct: 100 PAQTWGRARRFWRSNMNLDFNFLVKLAVQEIIKLR 134
>gi|291238829|ref|XP_002739328.1| PREDICTED: RecQ4-like [Saccoglossus kowalevskii]
Length = 774
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 24 KLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQD 82
K+ E + ++ S + + D +F+GR+IARIFHGI SP +PA V+GR+ RYWR H+D D
Sbjct: 699 KIENEIQIRQEVRSFICLHHDRDFSGRAIARIFHGIESPCYPAKVWGRDRRYWRCHLDAD 758
Query: 83 FGLLCKLAARELIKLR 98
F L K+A E++ LR
Sbjct: 759 FNSLIKIANSEILSLR 774
>gi|301773388|ref|XP_002922129.1| PREDICTED: ATP-dependent DNA helicase Q4-like [Ailuropoda
melanoleuca]
Length = 1190
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 8/103 (7%)
Query: 2 LKSKLRRYFQDENDV---DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRSIAR 54
LK+ L YF++E D PE T ED + D+ L++S+ D F+GR++AR
Sbjct: 1085 LKTLLSCYFEEEGPGRVGDEQGPEPGQTGIQDWEDQVRQDVRHLLSSWPDQQFSGRAVAR 1144
Query: 55 IFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIK 96
IFHGI SP +PA V+GR+ R+WR ++ F L +LA E+++
Sbjct: 1145 IFHGIGSPRYPAQVYGRDRRFWRRYLHLSFPGLMRLATEEILQ 1187
>gi|148229208|ref|NP_001091506.1| ATP-dependent DNA helicase Q4 [Bos taurus]
gi|146186517|gb|AAI40467.1| RECQL4 protein [Bos taurus]
gi|296480755|tpg|DAA22870.1| TPA: RecQ protein-like 4 [Bos taurus]
Length = 1218
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 10/104 (9%)
Query: 2 LKSKLRRYFQDENDVDA-----TAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRSI 52
LK+ L YF++E++ PE+ + ED + DI L++S+ + F+GR++
Sbjct: 1111 LKALLSHYFEEESEQPGGLETEDDPELGQDRLQDWEDQIRRDIRQLLSSWPEQRFSGRAV 1170
Query: 53 ARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELI 95
AR+FHGI SP +PA VFGR+ R+WR ++ F L LA +EL+
Sbjct: 1171 ARVFHGIGSPCYPAQVFGRDRRFWRKYLHLSFPALMHLATQELL 1214
>gi|359321064|ref|XP_539222.4| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q4 [Canis
lupus familiaris]
Length = 1115
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 28 EDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLL 86
ED + D+H L++S+ D F+GR++ARIFHGI SP +PA V+GR+ R+WR + F L
Sbjct: 1043 EDQVRQDVHRLLSSWPDQQFSGRAVARIFHGIGSPRYPAQVYGRDRRFWRRFLHLSFQAL 1102
Query: 87 CKLAARELIK 96
++A E+++
Sbjct: 1103 MRIATEEILR 1112
>gi|395860203|ref|XP_003802404.1| PREDICTED: ATP-dependent DNA helicase Q4 [Otolemur garnettii]
Length = 1205
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 13/107 (12%)
Query: 2 LKSKLRRYFQDENDV--------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTG 49
LK+ L RYF++E + D PE + ED + DI L+ + + F+G
Sbjct: 1095 LKALLGRYFEEEAEAALGPEPVGDKQGPEQEQAMLQDWEDQIRHDIRQLLILHPEEKFSG 1154
Query: 50 RSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELI 95
R++ARIFHGI SP +PA V+GR+ R+WR ++ F L +LA EL+
Sbjct: 1155 RAVARIFHGIGSPCYPAQVYGRDCRFWRKYLHLSFNALMRLATEELL 1201
>gi|344308651|ref|XP_003422990.1| PREDICTED: ATP-dependent DNA helicase Q4 [Loxodonta africana]
Length = 1204
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 10/104 (9%)
Query: 2 LKSKLRRYFQDEN-----DVDATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRSI 52
LK+ LR YF++E D PE + ED + DI L++ + F+GR++
Sbjct: 1097 LKTLLRCYFEEETLGPQGMEDEEGPEPGQARLQDWEDQIRRDIRQLLSLRPEEKFSGRAV 1156
Query: 53 ARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELI 95
ARIFHGI SP +PA VFGR+ R+WR ++ F L +LA EL+
Sbjct: 1157 ARIFHGIGSPCYPAQVFGRDRRFWRRYLHVSFHALMRLATEELL 1200
>gi|47219445|emb|CAG10809.1| unnamed protein product [Tetraodon nigroviridis]
Length = 910
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 10/104 (9%)
Query: 2 LKSKLRRYFQDENDVD-ATAPE--------IKLTKEDLLISDIHSLVNSYRDTNFTGRSI 52
LKS L YF + D APE L ED + +DI S + + D F+GR++
Sbjct: 806 LKSLLSEYFDKRREGDRVPAPEDYEGLDRYKVLDWEDQIRADIRSFLANRSDEKFSGRAV 865
Query: 53 ARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELI 95
ARI HGI SP +PA +G++ RYWR ++ DF L +LA +E+I
Sbjct: 866 ARILHGIGSPCYPAQTYGKDRRYWRKYIQFDFNQLIRLATQEII 909
>gi|431908159|gb|ELK11762.1| ATP-dependent DNA helicase Q4 [Pteropus alecto]
Length = 983
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 2 LKSKLRRYFQDEN-----DVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIF 56
LK+ L +YF+++ D PE E + DI ++S+ + F+GR++ARIF
Sbjct: 880 LKALLSQYFEEDGLGGSGDEQGPEPEQARDWEVQIRRDIRHFLSSWPEQQFSGRAVARIF 939
Query: 57 HGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELI 95
HGI SP +PA V+GR+ R+WR ++ +F L +LA E++
Sbjct: 940 HGIGSPCYPAQVYGRDRRFWRKYLHLNFHALMQLATEEVL 979
>gi|302771451|ref|XP_002969144.1| hypothetical protein SELMODRAFT_90579 [Selaginella moellendorffii]
gi|300163649|gb|EFJ30260.1| hypothetical protein SELMODRAFT_90579 [Selaginella moellendorffii]
Length = 769
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 2 LKSKLRRYFQDENDVDA-TAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
+++ ++ YF +D A T P T L +D+ + S + +FTGR+IARIFHG+
Sbjct: 669 IRASIKAYFDSSSDQQALTMPGFLKTTSSFLRADVKVFLRS-NEMDFTGRAIARIFHGLG 727
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SP +PA + RN +W HMD DF + ++A EL+ R
Sbjct: 728 SPMYPASSWSRNHFWGRHMDVDFYAIREVATAELLACR 765
>gi|302784292|ref|XP_002973918.1| hypothetical protein SELMODRAFT_100480 [Selaginella moellendorffii]
gi|300158250|gb|EFJ24873.1| hypothetical protein SELMODRAFT_100480 [Selaginella moellendorffii]
Length = 769
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 2 LKSKLRRYFQDENDVDA-TAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
+++ ++ YF +D A T P T L +D+ + S + +FTGR+IARIFHG+
Sbjct: 669 IRASIKAYFDSSSDQQALTMPGFLKTTSSFLRADVKVFLRS-NEMDFTGRAIARIFHGLG 727
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
SP +PA + RN +W HMD DF + ++A EL+ R
Sbjct: 728 SPMYPASSWSRNHFWGRHMDVDFYAIREVATAELLACR 765
>gi|195998273|ref|XP_002109005.1| hypothetical protein TRIADDRAFT_11173 [Trichoplax adhaerens]
gi|190589781|gb|EDV29803.1| hypothetical protein TRIADDRAFT_11173, partial [Trichoplax
adhaerens]
Length = 725
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 14/107 (13%)
Query: 2 LKSKLRRYFQDEN----------DVDATAPEIKLTKE--DLLISDIHSLVNSYRDTNFTG 49
L++ +R YF+ + + +A P ++++ D L DI S +++Y + F G
Sbjct: 620 LQTLIREYFKSQEPSSLLLSKNINTEAHLPTLQVSDSTIDGLRRDICSFLSTYNE-KFNG 678
Query: 50 RSIARIFHGIPSPNFPAIVFGR-NRYWRSHMDQDFGLLCKLAARELI 95
SIARIFHGI SP FPA V+ R R+WR HMD DF + ++A REL+
Sbjct: 679 SSIARIFHGIGSPAFPAEVWYRCKRFWRRHMDVDFKTISRVATRELV 725
>gi|326676401|ref|XP_001920631.3| PREDICTED: ATP-dependent DNA helicase Q4-like [Danio rerio]
Length = 1452
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 28 EDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLL 86
E + +DI + + S D F+GR++ARIFHGI SP +PA V+GR+ R+WR ++ DF +
Sbjct: 1381 ETQICADIRAFLCSRSDEKFSGRAVARIFHGIGSPCYPAQVYGRDRRFWRKYIQFDFNEI 1440
Query: 87 CKLAARELIKLR 98
+LA +E+I+ R
Sbjct: 1441 IRLATQEIIRTR 1452
>gi|332264341|ref|XP_003281198.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q4
[Nomascus leucogenys]
Length = 1178
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 11/107 (10%)
Query: 2 LKSKLRRYFQDENDV------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRS 51
LK L RYF++E D APE + ED + DI ++ + F+GR+
Sbjct: 1070 LKDLLGRYFEEEEAQGPGGMEDTQAPEPGQARLQDWEDQVRGDIRQFLSLRPEEKFSGRA 1129
Query: 52 IARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
+ARIFHGI SP +PA V+G++ R+WR ++ +F L LA EL+++
Sbjct: 1130 VARIFHGIGSPCYPAQVYGQDRRFWRKYLHLNFHALVGLATEELLRV 1176
>gi|449671068|ref|XP_002167906.2| PREDICTED: ATP-dependent DNA helicase Q4-like [Hydra magnipapillata]
Length = 1087
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 33 SDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAA 91
SDI SL+ +Y D NFTGR+IARIF GI SP +PA G + R+WR ++D DF L
Sbjct: 1019 SDISSLLCAYPDQNFTGRAIARIFQGIDSPCYPAWSIGSDKRFWRQYLDVDFNELRNFCG 1078
Query: 92 RELIKLR 98
EL+K R
Sbjct: 1079 LELVKYR 1085
>gi|147904200|ref|NP_001089101.1| RECQL4-helicase-like protein [Xenopus laevis]
gi|68303290|gb|AAY89585.1| RECQL4-helicase-like protein [Xenopus laevis]
Length = 1500
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 10/107 (9%)
Query: 2 LKSKLRRYFQDEN--------DVDATAPEIKLTK-EDLLISDIHSLVNSYRDTNFTGRSI 52
LK+ L YF+ + D D +IK+ + +D + SD+ ++ + + F+GR++
Sbjct: 1394 LKALLLDYFEKRDTELEAKVEDPDEELQQIKVQEAKDQVRSDVRHFLSIHEEERFSGRAL 1453
Query: 53 ARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
ARIFHGI SP +PA V+GR+ R+WR ++ DF + L+ E+I+L+
Sbjct: 1454 ARIFHGIGSPCYPAQVYGRDRRFWRKYIHLDFNEIMNLSKEEIIRLK 1500
>gi|390357875|ref|XP_003729122.1| PREDICTED: ATP-dependent DNA helicase Q4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 492
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Query: 2 LKSKLRRYFQDENDVDAT------APEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARI 55
L+ +L +YF +E D+ A + ++E + I ++ D FTGR++ARI
Sbjct: 389 LRGELIKYFTEELDLSKMKRRQDDASKNAASEEGRIRMTIRQFMSVNHDRTFTGRAVARI 448
Query: 56 FHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
GI SP +PA+V+GR+ R+WR+H++ DF + K+A E++++R
Sbjct: 449 LQGIASPCYPAMVWGRDRRFWRNHVEADFRTIIKIANEEVMRMR 492
>gi|390357877|ref|XP_780159.3| PREDICTED: ATP-dependent DNA helicase Q4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 492
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Query: 2 LKSKLRRYFQDENDVDAT------APEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARI 55
L+ +L +YF +E D+ A + ++E + I ++ D FTGR++ARI
Sbjct: 389 LRGELIKYFTEELDLSKMKRRQDDASKNAASEEGRIRMTIRQFMSVNHDRTFTGRAVARI 448
Query: 56 FHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
GI SP +PA+V+GR+ R+WR+H++ DF + K+A E++++R
Sbjct: 449 LQGIASPCYPAMVWGRDRRFWRNHVEADFRTIIKIANEEVMRMR 492
>gi|148227946|ref|NP_001089182.1| RecQ protein-like 4 [Xenopus laevis]
gi|82175128|dbj|BAE48358.1| RecQ4 protein [Xenopus laevis]
Length = 1503
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 10/107 (9%)
Query: 2 LKSKLRRYFQDEN--------DVDATAPEIKLTK-EDLLISDIHSLVNSYRDTNFTGRSI 52
LK+ L YF+ + D D +IK+ + +D + SD+ ++ + + F+GR++
Sbjct: 1397 LKALLLDYFEKRDTELEAKVEDPDEELQQIKVQEAKDQVRSDVRHFLSIHEEERFSGRAL 1456
Query: 53 ARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
ARIFHGI SP +PA V+GR+ R+WR ++ DF + L+ E+I+L+
Sbjct: 1457 ARIFHGIGSPCYPAQVYGRDRRFWRKYIHLDFNEIMNLSKEEIIRLK 1503
>gi|171846431|gb|AAI61707.1| Rts protein [Xenopus laevis]
Length = 1504
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 10/107 (9%)
Query: 2 LKSKLRRYFQDEN--------DVDATAPEIKLTK-EDLLISDIHSLVNSYRDTNFTGRSI 52
LK+ L YF+ + D D +IK+ + +D + SD+ ++ + + F+GR++
Sbjct: 1398 LKALLLDYFEKRDTELEAKVEDPDEELQQIKVQEAKDQVRSDVRHFLSIHEEERFSGRAL 1457
Query: 53 ARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
ARIFHGI SP +PA V+GR+ R+WR ++ DF + L+ E+I+L+
Sbjct: 1458 ARIFHGIGSPCYPAQVYGRDRRFWRKYIHLDFNEIMNLSKEEIIRLK 1504
>gi|403303001|ref|XP_003942136.1| PREDICTED: ATP-dependent DNA helicase Q4 [Saimiri boliviensis
boliviensis]
Length = 1191
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 2 LKSKLRRYFQDENDV--------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTG 49
LK L RYF++ + D PE + ED + DI L++ + F+G
Sbjct: 1081 LKELLSRYFEEVEEEAQGPGGVGDTHGPEPGQARLQDWEDQVRRDIRQLLSLRPEEKFSG 1140
Query: 50 RSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
R++ARIFHGI SP +PA VFG++ R+WR ++ F L +LA EL+++
Sbjct: 1141 RAVARIFHGIGSPCYPAQVFGQDRRFWRKYLHLSFHALVRLATEELLQV 1189
>gi|194473630|ref|NP_001123966.1| ATP-dependent DNA helicase Q4 [Rattus norvegicus]
gi|149066070|gb|EDM15943.1| RecQ protein-like 4 (predicted) [Rattus norvegicus]
Length = 1216
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 28 EDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLL 86
ED + D+H L++ + F+GR++ARIFHGI SP +PA VFG++ R+WR ++ DF L
Sbjct: 1144 EDQVRRDVHQLLSLRPEEKFSGRAVARIFHGIASPCYPAQVFGQDRRFWRKYLHLDFHAL 1203
Query: 87 CKLAARELI 95
LA EL+
Sbjct: 1204 MHLATEELL 1212
>gi|297683922|ref|XP_002819610.1| PREDICTED: ATP-dependent DNA helicase Q4 [Pongo abelii]
Length = 1207
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 11/107 (10%)
Query: 2 LKSKLRRYFQDENDV------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRS 51
LK L RYF++E DA PE + ED + DI ++ + F+GR+
Sbjct: 1099 LKDLLGRYFEEEEAQGPGGMEDAQGPEPGQARLQDWEDQVRCDIRQFLSLRPEEKFSGRA 1158
Query: 52 IARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
+ARIFHGI SP +PA V+G++ R+WR ++ F L LA EL+++
Sbjct: 1159 VARIFHGIGSPCYPAQVYGQDRRFWRKYLHLSFHALVGLATEELLRV 1205
>gi|296227019|ref|XP_002759208.1| PREDICTED: ATP-dependent DNA helicase Q4 [Callithrix jacchus]
Length = 1230
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 2 LKSKLRRYFQD----------ENDVDATAP-EIKLTK-EDLLISDIHSLVNSYRDTNFTG 49
LK L RYF++ D AP + +L ED + DI L++ + F+G
Sbjct: 1101 LKDLLSRYFEEVEEEAQGPGGMGDTQGPAPGQARLQDWEDQVRCDIRQLLSLRPEEKFSG 1160
Query: 50 RSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
R++ARIFHGI SP +PA VFG++ R+WR ++ F L +LA EL+++
Sbjct: 1161 RAVARIFHGIGSPCYPAQVFGQDRRFWRKYLHLSFHTLVRLATEELLQV 1209
>gi|410911854|ref|XP_003969405.1| PREDICTED: ATP-dependent DNA helicase Q4-like [Takifugu rubripes]
Length = 1322
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 2 LKSKLRRYFQDENDVDAT-APE--------IKLTKEDLLISDIHSLVNSYRDTNFTGRSI 52
LKS L YF + APE L ED + +DI + S D F+GR++
Sbjct: 1216 LKSLLSEYFDKRCERSGVPAPEDCEGFDKYKILDWEDQIRADIRGFLASRSDEKFSGRAV 1275
Query: 53 ARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
ARI HGI SP +PA ++ ++ RYWR ++ DF L +LA RE++ +
Sbjct: 1276 ARILHGIGSPCYPAQIYAKDRRYWRKYIQFDFNQLIRLATREIVGFK 1322
>gi|354491074|ref|XP_003507681.1| PREDICTED: ATP-dependent DNA helicase Q4 [Cricetulus griseus]
Length = 1218
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 8/102 (7%)
Query: 2 LKSKLRRYFQDENDV---DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRSIAR 54
LK+ L YF++E + D +PE T+ ED + DI L++ + F+GR++AR
Sbjct: 1113 LKTLLSHYFEEEEEEAVKDEQSPEPGQTELQDWEDHIRRDIRQLLSLRPEERFSGRAVAR 1172
Query: 55 IFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELI 95
IFHGI SP +PA V+G++ R+WR ++ +F L +LA EL+
Sbjct: 1173 IFHGIASPCYPAQVYGQDRRFWRKYLHMNFHALMRLATEELL 1214
>gi|402879404|ref|XP_003903331.1| PREDICTED: ATP-dependent DNA helicase Q4 [Papio anubis]
Length = 1208
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 2 LKSKLRRYFQDENDV--------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTG 49
LK L RYF++ + D PE + ED + DI ++ + F+G
Sbjct: 1098 LKDLLGRYFEEVEEEAQGPGDMEDTQGPEPGQARLQDWEDQVRCDIRQFLSLRPEEKFSG 1157
Query: 50 RSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
R++ARIFHGI SP +PA V+G++ R+WR +++ F L +LA EL+++
Sbjct: 1158 RAVARIFHGIGSPCYPAQVYGQDRRFWRKYLNLSFHALVRLATEELLRV 1206
>gi|338728411|ref|XP_001495523.3| PREDICTED: ATP-dependent DNA helicase Q4 [Equus caballus]
Length = 1168
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 20 APEIKLTK----EDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRN-RY 74
PE L + ED DI L++S+ + F+GR++ARIFHGI SP +PA V+GR+ R+
Sbjct: 1084 GPEPGLARLQDWEDQTRRDIRHLLSSWPEQQFSGRAVARIFHGIGSPCYPAQVYGRDRRF 1143
Query: 75 WRSHMDQDFGLLCKLAARELI 95
WR ++ F L LA E++
Sbjct: 1144 WRKYLHLSFHALAHLATEEIL 1164
>gi|344236588|gb|EGV92691.1| ATP-dependent DNA helicase Q4 [Cricetulus griseus]
Length = 561
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 8/102 (7%)
Query: 2 LKSKLRRYFQDENDV---DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRSIAR 54
LK+ L YF++E + D +PE T+ ED + DI L++ + F+GR++AR
Sbjct: 456 LKTLLSHYFEEEEEEAVKDEQSPEPGQTELQDWEDHIRRDIRQLLSLRPEERFSGRAVAR 515
Query: 55 IFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELI 95
IFHGI SP +PA V+G++ R+WR ++ +F L +LA EL+
Sbjct: 516 IFHGIASPCYPAQVYGQDRRFWRKYLHMNFHALMRLATEELL 557
>gi|395512765|ref|XP_003760604.1| PREDICTED: ATP-dependent DNA helicase Q4 [Sarcophilus harrisii]
Length = 1353
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 14/108 (12%)
Query: 2 LKSKLRRYFQD------------ENDVDATAPEIKLTK-EDLLISDIHSLVNSYRDTNFT 48
LKS L RYF++ +++ D + +L E + SDI L++ ++ F+
Sbjct: 1241 LKSLLTRYFEEGTAALWEGEFREDSEQDHDFGQARLQDWESSVCSDIRQLLSIRQEEKFS 1300
Query: 49 GRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELI 95
GR++ARIFHGI SP +PA V+G++ R+WR ++ F L LA RE++
Sbjct: 1301 GRAVARIFHGIGSPRYPAEVYGQDRRFWRKYLHVSFPSLLCLATREIL 1348
>gi|432948717|ref|XP_004084136.1| PREDICTED: ATP-dependent DNA helicase Q4-like, partial [Oryzias
latipes]
Length = 141
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Query: 1 MLKSKLRRYFQDEND----VDATAPEIK-----LTKEDLLISDIHSLVNSYRDTNFTGRS 51
LK+ L YF + D V PE L E+ + +DI + D F+GR+
Sbjct: 34 QLKTLLSDYFDKKRDGGGAVQQEEPEEPDKHELLEWEEPIRADIRRFLAHRSDEKFSGRA 93
Query: 52 IARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
+ARI HGI SP +PA+++G++ RYWR ++ DF L ++A +E+I +
Sbjct: 94 VARILHGIGSPRYPAVIYGKDRRYWRKYIHFDFNRLIQMATQEIIGFK 141
>gi|334326459|ref|XP_001372365.2| PREDICTED: ATP-dependent DNA helicase Q4-like [Monodelphis domestica]
Length = 1511
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 14/108 (12%)
Query: 2 LKSKLRRYFQD------------ENDVDATAPEIKLTK-EDLLISDIHSLVNSYRDTNFT 48
LK+ L RYF++ E++ + + +L E + SDI L++ ++ F+
Sbjct: 1401 LKALLTRYFEEGTAALFEDQFREESEQNHDFGQARLQDWESSICSDIRHLLSIRQEEKFS 1460
Query: 49 GRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELI 95
GR++ARIFHGI SP +PA V+G++ R+WR ++ F L +LA RE++
Sbjct: 1461 GRALARIFHGIGSPCYPAEVYGKDRRFWRKYLHVSFPSLLRLATREIL 1508
>gi|355698304|gb|EHH28852.1| ATP-dependent DNA helicase Q4, partial [Macaca mulatta]
Length = 1142
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 13/109 (11%)
Query: 2 LKSKLRRYFQDENDV--------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTG 49
LK L RYF++ + D PE + ED + DI ++ F+G
Sbjct: 1033 LKDLLGRYFEEVEEEAQGPGDMEDTQGPEPGQARLQDWEDQVRCDIRQFLSLRPKEKFSG 1092
Query: 50 RSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
R++ARIFHGI SP +PA V+G++ R+WR +++ F L +LA EL+++
Sbjct: 1093 RAVARIFHGIGSPCYPAQVYGQDRRFWRKYLNLSFHALVRLATEELLRV 1141
>gi|327287430|ref|XP_003228432.1| PREDICTED: ATP-dependent DNA helicase Q4-like [Anolis carolinensis]
Length = 1342
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 28 EDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLL 86
ED + +D+ ++ +D F+GR++ARI HGI SP FPA ++GR+ R+WR ++ DF +
Sbjct: 1271 EDQIRADVRHFLSIRQDEKFSGRAVARILHGIGSPCFPAQIYGRDRRFWRKYIHFDFNRI 1330
Query: 87 CKLAARELI 95
+LA E+I
Sbjct: 1331 MRLATEEII 1339
>gi|348555961|ref|XP_003463791.1| PREDICTED: ATP-dependent DNA helicase Q4-like [Cavia porcellus]
Length = 1228
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 28 EDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLL 86
ED + DI L++ + + F+GR++ARIFHGI SP +PA V+G++ R+WR ++ +F L
Sbjct: 1156 EDQVRHDIRQLLSLWPEERFSGRAVARIFHGIGSPCYPAQVYGQDRRFWRKYLHLNFHAL 1215
Query: 87 CKLAARELI 95
+LA EL+
Sbjct: 1216 MRLATEELL 1224
>gi|90265257|emb|CAD79702.2| H0302E05.5 [Oryza sativa Indica Group]
Length = 925
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKED-LLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
++ K+ YF ++ +L K L +DI + S FT R++ARI HGI
Sbjct: 822 IQKKIMEYFSKDDGTSENDCRTQLQKSSPFLQADIKVFIQSNSFAKFTPRAVARIMHGIS 881
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKL 97
SP FP++ + +N +W +++ DF L+ + A EL+KL
Sbjct: 882 SPAFPSVTWSKNHFWGRYVEVDFPLVMEAAKAELVKL 918
>gi|38346063|emb|CAD41405.2| OJ000223_09.17 [Oryza sativa Japonica Group]
Length = 874
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKED-LLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
++ K+ YF ++ +L K L +DI + S FT R++ARI HGI
Sbjct: 771 IQKKIMEYFSKDDGTSENDCRTQLQKSSPFLQADIKVFIQSNSFAKFTPRAVARIMHGIS 830
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKL 97
SP FP++ + +N +W +++ DF L+ + A EL+KL
Sbjct: 831 SPAFPSVTWSKNHFWGRYVEVDFPLVMEAAKAELVKL 867
>gi|297602951|ref|NP_001053140.2| Os04g0486800 [Oryza sativa Japonica Group]
gi|255675574|dbj|BAF15054.2| Os04g0486800 [Oryza sativa Japonica Group]
Length = 873
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKED-LLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
++ K+ YF ++ +L K L +DI + S FT R++ARI HGI
Sbjct: 770 IQKKIMEYFSKDDGTSENDCRTQLQKSSPFLQADIKVFIQSNSFAKFTPRAVARIMHGIS 829
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKL 97
SP FP++ + +N +W +++ DF L+ + A EL+KL
Sbjct: 830 SPAFPSVTWSKNHFWGRYVEVDFPLVMEAAKAELVKL 866
>gi|218195087|gb|EEC77514.1| hypothetical protein OsI_16386 [Oryza sativa Indica Group]
gi|222629089|gb|EEE61221.1| hypothetical protein OsJ_15254 [Oryza sativa Japonica Group]
Length = 926
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKED-LLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
++ K+ YF ++ +L K L +DI + S FT R++ARI HGI
Sbjct: 823 IQKKIMEYFSKDDGTSENDCRTQLQKSSPFLQADIKVFIQSNSFAKFTPRAVARIMHGIS 882
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKL 97
SP FP++ + +N +W +++ DF L+ + A EL+KL
Sbjct: 883 SPAFPSVTWSKNHFWGRYVEVDFPLVMEAAKAELVKL 919
>gi|38344226|emb|CAD41320.2| OJ991113_30.2 [Oryza sativa Japonica Group]
Length = 927
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKED-LLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
++ K+ YF ++ +L K L +DI + S FT R++ARI HGI
Sbjct: 824 IQKKIMEYFSKDDGTSENDCRTQLQKSSPFLQADIKVFIQSNSFAKFTPRAVARIMHGIS 883
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKL 97
SP FP++ + +N +W +++ DF L+ + A EL+KL
Sbjct: 884 SPAFPSVTWSKNHFWGRYVEVDFPLVMEAAKAELVKL 920
>gi|326436565|gb|EGD82135.1| hypothetical protein PTSG_02809 [Salpingoeca sp. ATCC 50818]
Length = 1571
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 1 MLKSKLRRYF-QDENDVDATAPEIKLTKEDL--LISDIHSLVNSYRDTNFTGRSIARIFH 57
+LK +L YF Q+E + A I+++ + L + + ++RD T R++AR+ H
Sbjct: 1471 LLKERLHEYFEQEEIALPAYPQNIRVSNLEYGQLRRMLRDFITTHRDRRLTARALARMCH 1530
Query: 58 GIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
G+ SP FPA+ +GR R WR+ + DF + +A +ELI+ R
Sbjct: 1531 GLSSPAFPAVEWGRTRLWRTFSNIDFHTIRCVAQQELIEYR 1571
>gi|426361068|ref|XP_004047747.1| PREDICTED: ATP-dependent DNA helicase Q4 [Gorilla gorilla gorilla]
Length = 1210
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 2 LKSKLRRYFQDENDV--------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTG 49
LK L RYF++E + DA PE + ED + DI ++ + F+G
Sbjct: 1100 LKDLLGRYFEEEEEQGQEPGGMEDAQGPEPGQARLQDWEDQVRCDIRQFLSLRPEEKFSG 1159
Query: 50 RSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
R++ARIFHGI SP +PA V+G++ R+WR ++ F L LA EL+++
Sbjct: 1160 RAVARIFHGIGSPCYPAQVYGQDRRFWRKYLHLSFHALVGLATEELLRV 1208
>gi|126153389|gb|AAI31657.1| Recql4 protein [Mus musculus]
Length = 1214
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 28 EDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLL 86
ED + D+ L++ + F+GR++ARIFHGI SP +PA V+G + R+WR ++ DF L
Sbjct: 1142 EDQIRRDVRQLLSLRPEERFSGRAVARIFHGIASPCYPAQVYGLDRRFWRKYLHLDFHAL 1201
Query: 87 CKLAARELI 95
LA EL+
Sbjct: 1202 MHLATEELL 1210
>gi|73621453|sp|Q75NR7.2|RECQ4_MOUSE RecName: Full=ATP-dependent DNA helicase Q4; AltName: Full=DNA
helicase, RecQ-like type 4; Short=RecQ4; AltName:
Full=RecQ protein-like 4
gi|12964694|dbj|BAB32696.1| RecQ helicase protein-like 4 [Mus musculus]
Length = 1216
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 28 EDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLL 86
ED + D+ L++ + F+GR++ARIFHGI SP +PA V+G + R+WR ++ DF L
Sbjct: 1144 EDQIRRDVRQLLSLRPEERFSGRAVARIFHGIASPCYPAQVYGLDRRFWRKYLHLDFHAL 1203
Query: 87 CKLAARELI 95
LA EL+
Sbjct: 1204 MHLATEELL 1212
>gi|198438253|ref|XP_002130892.1| PREDICTED: similar to RecQ protein-like 4 [Ciona intestinalis]
Length = 1241
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 2 LKSKLRRYFQDE-NDVDATAPE-IKLTKEDLLISDIHSLVNSYRDT---NFTGRSIARIF 56
LK + YFQ+E N PE ++ + E+ + S + + + TGR+IARIF
Sbjct: 1139 LKEVIDAYFQEEENSKSDDQPEPLQSSDEEEIRSSVRQFLYVHGGDLGDKVTGRAIARIF 1198
Query: 57 HGIPSPNFPAIVFG-RNRYWRSHMDQDFGLLCKLAARELIKLR 98
HGI SP +PA +G R+WRS ++ DF + KLA ELIK R
Sbjct: 1199 HGIDSPCYPARNWGPARRFWRSKLNYDFNTVLKLATEELIKFR 1241
>gi|110815828|ref|NP_478121.2| ATP-dependent DNA helicase Q4 [Mus musculus]
gi|46092353|dbj|BAD14289.1| RecQ helicase protein-like 4 [Mus musculus]
gi|148697661|gb|EDL29608.1| RecQ protein-like 4, isoform CRA_b [Mus musculus]
gi|189442089|gb|AAI67215.1| RecQ protein-like 4 [synthetic construct]
Length = 1216
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 28 EDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLL 86
ED + D+ L++ + F+GR++ARIFHGI SP +PA V+G + R+WR ++ DF L
Sbjct: 1144 EDQIRRDVRQLLSLRPEERFSGRAVARIFHGIASPCYPAQVYGLDRRFWRKYLHLDFHAL 1203
Query: 87 CKLAARELI 95
LA EL+
Sbjct: 1204 MHLATEELL 1212
>gi|444523684|gb|ELV13614.1| ATP-dependent DNA helicase Q4 [Tupaia chinensis]
Length = 1093
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 2 LKSKLRRYF-------------QDENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFT 48
LK+ LRRYF QDE + ++ E+ + D L++ + F+
Sbjct: 983 LKALLRRYFEEEEEGPQEPEALQDEEGPEPGQARLQ-DWEEQVRRDTRQLLSLRPEERFS 1041
Query: 49 GRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKLR 98
GR++ARIFHGI SP +PA V+G++ R+WR ++ F L +LA EL+ R
Sbjct: 1042 GRAVARIFHGIGSPCYPAQVYGQDRRFWRKYLHLSFHSLMQLATEELLLQR 1092
>gi|357167862|ref|XP_003581368.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Brachypodium
distachyon]
Length = 875
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 2 LKSKLRRYFQDEN---DVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHG 58
++ ++ YF N D D P K L SDI + S FT R++ARI HG
Sbjct: 774 IQKRIIDYFGKNNATSDDDYCTPLCK--SSTFLQSDIKVFLQSNSFAKFTPRAVARIMHG 831
Query: 59 IPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKL 97
I SP FPA + +N +W +M+ DF L+ + A EL+K
Sbjct: 832 ISSPAFPAATWSKNHFWGRYMEVDFPLVMEAAKSELVKF 870
>gi|114622212|ref|XP_520023.2| PREDICTED: ATP-dependent DNA helicase Q4 [Pan troglodytes]
Length = 1208
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 2 LKSKLRRYFQDENDV------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRS 51
LK L RYF++E DA PE + ED + DI ++ + F+ R+
Sbjct: 1100 LKDLLGRYFEEEEGQEPGGMEDAQGPEPGQARLQDWEDQVRCDIRQFLSLRPEEKFSSRA 1159
Query: 52 IARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
+ARIFHGI SP +PA V+G++ R+WR ++ F L LA EL+++
Sbjct: 1160 VARIFHGIGSPCYPAQVYGQDRRFWRKYLHLSFHALVGLATEELLRV 1206
>gi|410336633|gb|JAA37263.1| RecQ protein-like 4 [Pan troglodytes]
Length = 1208
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 2 LKSKLRRYFQDENDV------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRS 51
LK L RYF++E DA PE + ED + DI ++ + F+ R+
Sbjct: 1100 LKDLLGRYFEEEEGQEPGGMEDAQGPEPGQARLQDWEDQVRCDIRQFLSLRPEEKFSSRA 1159
Query: 52 IARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
+ARIFHGI SP +PA V+G++ R+WR ++ F L LA EL+++
Sbjct: 1160 VARIFHGIGSPCYPAQVYGQDRRFWRKYLHLSFHALVGLATEELLRV 1206
>gi|119602477|gb|EAW82071.1| RecQ protein-like 4, isoform CRA_b [Homo sapiens]
Length = 1208
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 2 LKSKLRRYFQDENDV------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRS 51
LK L RYF++E DA PE + ED + DI ++ + F+ R+
Sbjct: 1100 LKDLLGRYFEEEEGQEPGGMEDAQGPEPGQARLQDWEDQVRCDIRQFLSLRPEEKFSSRA 1159
Query: 52 IARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
+ARIFHGI SP +PA V+G++ R+WR ++ F L LA EL+++
Sbjct: 1160 VARIFHGIGSPCYPAQVYGQDRRFWRKYLHLSFHALVGLATEELLQV 1206
>gi|284005309|ref|NP_004251.3| ATP-dependent DNA helicase Q4 [Homo sapiens]
gi|18206225|sp|O94761.1|RECQ4_HUMAN RecName: Full=ATP-dependent DNA helicase Q4; AltName: Full=DNA
helicase, RecQ-like type 4; Short=RecQ4; AltName:
Full=RTS; AltName: Full=RecQ protein-like 4
gi|4191810|dbj|BAA74453.1| DNA helicase [Homo sapiens]
gi|6440969|dbj|BAA86899.1| RECQL4 helicase [Homo sapiens]
gi|73808276|gb|AAZ85145.1| RecQ protein-like 4 [Homo sapiens]
Length = 1208
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 2 LKSKLRRYFQDENDV------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRS 51
LK L RYF++E DA PE + ED + DI ++ + F+ R+
Sbjct: 1100 LKDLLGRYFEEEEGQEPGGMEDAQGPEPGQARLQDWEDQVRCDIRQFLSLRPEEKFSSRA 1159
Query: 52 IARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
+ARIFHGI SP +PA V+G++ R+WR ++ F L LA EL+++
Sbjct: 1160 VARIFHGIGSPCYPAQVYGQDRRFWRKYLHLSFHALVGLATEELLQV 1206
>gi|397497313|ref|XP_003819457.1| PREDICTED: ATP-dependent DNA helicase Q4 [Pan paniscus]
Length = 841
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 2 LKSKLRRYFQDENDV------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRS 51
LK L RYF++E DA PE + ED + DI ++ + F+ R+
Sbjct: 733 LKDLLGRYFEEEEGQEPGGMEDAQGPEPGQARLQDWEDQVRCDIRQFLSLRPEEKFSSRA 792
Query: 52 IARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
+ARIFHGI SP +PA V+G++ R+WR ++ F L LA EL+++
Sbjct: 793 VARIFHGIGSPCYPAQVYGQDRRFWRKYLHLSFHALVGLATEELLRV 839
>gi|119602476|gb|EAW82070.1| RecQ protein-like 4, isoform CRA_a [Homo sapiens]
Length = 851
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 2 LKSKLRRYFQDENDV------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRS 51
LK L RYF++E DA PE + ED + DI ++ + F+ R+
Sbjct: 743 LKDLLGRYFEEEEGQEPGGMEDAQGPEPGQARLQDWEDQVRCDIRQFLSLRPEEKFSSRA 802
Query: 52 IARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
+ARIFHGI SP +PA V+G++ R+WR ++ F L LA EL+++
Sbjct: 803 VARIFHGIGSPCYPAQVYGQDRRFWRKYLHLSFHALVGLATEELLQV 849
>gi|38014099|gb|AAH11602.2| RECQL4 protein, partial [Homo sapiens]
Length = 741
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 2 LKSKLRRYFQDENDV------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRS 51
LK L RYF++E DA PE + ED + DI ++ + F+ R+
Sbjct: 633 LKDLLGRYFEEEEGQEPGGMEDAQGPEPGQARLQDWEDQVRCDIRQFLSLRPEEKFSSRA 692
Query: 52 IARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
+ARIFHGI SP +PA V+G++ R+WR ++ F L LA EL+++
Sbjct: 693 VARIFHGIGSPCYPAQVYGQDRRFWRKYLHLSFHALVGLATEELLQV 739
>gi|39644917|gb|AAH13277.2| RECQL4 protein [Homo sapiens]
Length = 652
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 2 LKSKLRRYFQDENDV------DATAPEIKLTK----EDLLISDIHSLVNSYRDTNFTGRS 51
LK L RYF++E DA PE + ED + DI ++ + F+ R+
Sbjct: 544 LKDLLGRYFEEEEGQEPGGMEDAQGPEPGQARLQDWEDQVRCDIRQFLSLRPEEKFSSRA 603
Query: 52 IARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDFGLLCKLAARELIKL 97
+ARIFHGI SP +PA V+G++ R+WR ++ F L LA EL+++
Sbjct: 604 VARIFHGIGSPCYPAQVYGQDRRFWRKYLHLSFHALVGLATEELLQV 650
>gi|110741565|dbj|BAE98731.1| putative ATP-dependent DNA helicase RecQ [Arabidopsis thaliana]
Length = 911
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPS 61
L+S++ YF + D+ P L +DI + S R FT R+IARI HG+ S
Sbjct: 809 LQSRIFDYFNGDEKCDS--PSKATQNCAFLRADIKVFLQSNRQAKFTPRAIARIMHGVGS 866
Query: 62 PNFPAIVFGRNRYWRSHMDQDFGLLCKLAAREL 94
P FP V+ + +W +M+ DF ++ + A EL
Sbjct: 867 PAFPNSVWSKTHFWGRYMNVDFRVIMEAAQTEL 899
>gi|17426897|emb|CAD13472.1| helicase [Arabidopsis thaliana]
Length = 870
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPS 61
L+S++ YF + D+ P L +DI + S R FT R+IARI HG+ S
Sbjct: 768 LQSRIFDYFNGDEKCDS--PSKATQNCAFLRADIKVFLQSNRQAKFTPRAIARIMHGVGS 825
Query: 62 PNFPAIVFGRNRYWRSHMDQDFGLLCKLAAREL 94
P FP V+ + +W +M+ DF ++ + A EL
Sbjct: 826 PAFPNSVWSKTHFWGRYMNVDFRVIMEAAQTEL 858
>gi|30690118|ref|NP_174109.2| ATP-dependent DNA helicase Q-like 5 [Arabidopsis thaliana]
gi|298289257|sp|Q0WVW7.2|RQL5_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 5; AltName:
Full=RecQ-like protein 5; Short=AtRecQ5; Short=AtRecQl5
gi|332192766|gb|AEE30887.1| ATP-dependent DNA helicase Q-like 5 [Arabidopsis thaliana]
Length = 911
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPS 61
L+S++ YF + D+ P L +DI + S R FT R+IARI HG+ S
Sbjct: 809 LQSRIFDYFNGDEKCDS--PSKATQNCAFLRADIKVFLQSNRQAKFTPRAIARIMHGVGS 866
Query: 62 PNFPAIVFGRNRYWRSHMDQDFGLLCKLAAREL 94
P FP V+ + +W +M+ DF ++ + A EL
Sbjct: 867 PAFPNSVWSKTHFWGRYMNVDFRVIMEAAQTEL 899
>gi|25403040|pir||A86404 probable protein ATP-dependent DNA helicase RecQ [imported] -
Arabidopsis thaliana
Length = 941
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPS 61
L+S++ YF + D+ P L +DI + S R FT R+IARI HG+ S
Sbjct: 839 LQSRIFDYFNGDEKCDS--PSKATQNCAFLRADIKVFLQSNRQAKFTPRAIARIMHGVGS 896
Query: 62 PNFPAIVFGRNRYWRSHMDQDFGLLCKLAAREL 94
P FP V+ + +W +M+ DF ++ + A EL
Sbjct: 897 PAFPNSVWSKTHFWGRYMNVDFRVIMEAAQTEL 929
>gi|12320889|gb|AAG50580.1|AC079280_11 ATP-dependent DNA helicase RecQ, putative [Arabidopsis thaliana]
Length = 941
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPS 61
L+S++ YF + D+ P L +DI + S R FT R+IARI HG+ S
Sbjct: 839 LQSRIFDYFNGDEKCDS--PSKATQNCAFLRADIKVFLQSNRQAKFTPRAIARIMHGVGS 896
Query: 62 PNFPAIVFGRNRYWRSHMDQDFGLLCKLAAREL 94
P FP V+ + +W +M+ DF ++ + A EL
Sbjct: 897 PAFPNSVWSKTHFWGRYMNVDFRVIMEAAQTEL 929
>gi|297738361|emb|CBI27562.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPS 61
L+ K+ YF + + D P L +DI + S FT R++ARI HGI S
Sbjct: 589 LQRKISDYFSGDGNGDI--PNKMDQSSPFLRADIKVFLQSNSQVKFTPRAVARIMHGIAS 646
Query: 62 PNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELI 95
P +P+ + R +W +M DF ++ K A EL+
Sbjct: 647 PAYPSATWSRTHFWGRYMQMDFQVVMKAAKAELM 680
>gi|225425865|ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Vitis
vinifera]
Length = 941
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPS 61
L+ K+ YF + + D P L +DI + S FT R++ARI HGI S
Sbjct: 842 LQRKISDYFSGDGNGDI--PNKMDQSSPFLRADIKVFLQSNSQVKFTPRAVARIMHGIAS 899
Query: 62 PNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELI 95
P +P+ + R +W +M DF ++ K A EL+
Sbjct: 900 PAYPSATWSRTHFWGRYMQMDFQVVMKAAKAELM 933
>gi|242073516|ref|XP_002446694.1| hypothetical protein SORBIDRAFT_06g020690 [Sorghum bicolor]
gi|241937877|gb|EES11022.1| hypothetical protein SORBIDRAFT_06g020690 [Sorghum bicolor]
Length = 567
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 2 LKSKLRRYFQ---DENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHG 58
++ K+ +YF +D + T P L +DI + S FT R++ARI HG
Sbjct: 467 IQKKIIQYFSKNYSTSDNNCTQPH---KSSPFLQADIKVFLQSNSFAKFTPRAVARIMHG 523
Query: 59 IPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKL 97
I SP FP+ + +N +W +++ DF ++ + A EL+K
Sbjct: 524 ISSPAFPSATWSKNHFWGRYVEVDFPVVMEAAKAELVKF 562
>gi|351713958|gb|EHB16877.1| ATP-dependent DNA helicase Q4 [Heterocephalus glaber]
Length = 1192
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 28 EDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRN-RYWRSHMDQDF 83
ED + +I L++ + + F+GR++ARIFHGI SP +PA V+GR+ R+WR ++ +F
Sbjct: 1120 EDQVRPNIRQLLSLWPEERFSGRAVARIFHGIGSPCYPAEVYGRDQRFWRKYLHLNF 1176
>gi|260810143|ref|XP_002599863.1| hypothetical protein BRAFLDRAFT_127645 [Branchiostoma floridae]
gi|229285146|gb|EEN55875.1| hypothetical protein BRAFLDRAFT_127645 [Branchiostoma floridae]
Length = 807
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 2 LKSKLRRYFQDENDVDATA--------PEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIA 53
LK LR YF+ E ++ ++ ++ L E + +DI S V + D NFTGR+IA
Sbjct: 600 LKVTLREYFEKEPTLNVSSDSRGEEQEEKVPLKNEGQVRADIRSFVCLHHDRNFTGRAIA 659
Query: 54 RIFHGIPSPNFPA 66
RIFHGI SP +PA
Sbjct: 660 RIFHGITSPCYPA 672
>gi|168051272|ref|XP_001778079.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670518|gb|EDQ57085.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 2 LKSKLRRYFQDEND--VDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGI 59
L+S + YF D ++ + P I + L +DI + ++ + NF GR++ARIFHG+
Sbjct: 652 LQSCIATYFSKNQDDLINQSVPSIVESTSSFLKADIKVFLKTHENKNFNGRAVARIFHGL 711
Query: 60 PSPNFPAIVFGRNRYW 75
SP +P + +N +W
Sbjct: 712 WSPAYPYAAWCKNHFW 727
>gi|449435462|ref|XP_004135514.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Cucumis
sativus]
gi|449495007|ref|XP_004159708.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Cucumis
sativus]
Length = 952
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPS 61
L+ K+ YFQ+ + D P L +DI + S FT R++ARI HGI S
Sbjct: 852 LEEKICSYFQEGDTYDT--PNKMSQSSPFLRADIKVFLQSNSQAKFTPRAVARIMHGIGS 909
Query: 62 PNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKL 97
P +P+ ++ R +W + + +F + + A EL+ +
Sbjct: 910 PAYPSTIWSRTHFWGRYTNVNFEAVMEAATIELVNI 945
>gi|297845738|ref|XP_002890750.1| helicase [Arabidopsis lyrata subsp. lyrata]
gi|297336592|gb|EFH67009.1| helicase [Arabidopsis lyrata subsp. lyrata]
Length = 900
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPS 61
L+S++ YF + D P L +DI + S R FT R+IARI HG+ S
Sbjct: 798 LQSRIFDYFNGDEKCDT--PSKTTQNCAFLRADIKVFLQSNRQAKFTPRAIARIMHGVGS 855
Query: 62 PNFPAIVFGRNRYWRSHMDQDFGLLCKLAAREL 94
P FP V+ + +W +M +F ++ A EL
Sbjct: 856 PAFPNSVWSKTHFWGRYMSVEFRVIMDAAQTEL 888
>gi|308804431|ref|XP_003079528.1| ATP-dependent DNA helicase RecQ, putative (ISS) [Ostreococcus
tauri]
gi|116057983|emb|CAL54186.1| ATP-dependent DNA helicase RecQ, putative (ISS) [Ostreococcus
tauri]
Length = 453
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTN-------FTGRSIAR 54
L+ +L Y +++D+ + P T+ +LL+ DI L+ ++R T R++AR
Sbjct: 348 LRQRLAEYLNEDSDMVPSPPACVKTESNLLLVDIKVLL-AHRSGGKNGGAGMMTARAVAR 406
Query: 55 IFHGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
I H + SP +PA +GR+ W H D DF + A E+ K R
Sbjct: 407 ILHKLHSPAYPAKEWGRHHAWGRHADVDFKHILARAEEEIAKAR 450
>gi|328769991|gb|EGF80034.1| hypothetical protein BATDEDRAFT_25649 [Batrachochytrium dendrobatidis
JAM81]
Length = 1514
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 24 KLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDF 83
KL K ++ IS I S V ++ +GR++ARIFHG+ SP +PA ++ N++W SH +F
Sbjct: 1442 KLAKINVEIS-IKSFVKAHLSEVTSGRAVARIFHGLSSPKYPAKIWLSNKHWNSHPYYNF 1500
Query: 84 GLLCKLAAREL 94
L +LA++ +
Sbjct: 1501 KDLARLASKAM 1511
>gi|412989172|emb|CCO15763.1| ATP-dependent DNA helicase RecQ [Bathycoccus prasinos]
Length = 1288
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 18 ATAPEIKLTKEDLLISDIHSLVNSYRDTNFTG------RSIARIFHGIPSPNFPAIVFGR 71
A P+ LT++ +L++DI ++ RD G R++ARI HGI SP +PA + R
Sbjct: 1187 AKRPKCVLTEKRMLVADIREILTHRRDGKVGGAGMLRARAVARILHGIGSPKYPAAEWRR 1246
Query: 72 N---RYWRSHMDQDFGLLCKLAARELIKLR 98
W H D DF + ++ E++++R
Sbjct: 1247 GSSAHLWERHRDVDFYTVVEMCNAEILRVR 1276
>gi|350646239|emb|CCD59073.1| hypothetical protein Smp_069600 [Schistosoma mansoni]
Length = 1108
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 41 SYRDTNFTGRSIARIFHGIPSPNFPAIVFGR-NRYWRSHMDQDFGLLCKLAARELI 95
S D TGR+IA IFHGI +P+FPA + R+W+ H+D D+ + K+A +EL+
Sbjct: 1047 SSLDRKITGRTIANIFHGISTPHFPATTWSYCRRFWKVHLDIDWRTIKKIATQELL 1102
>gi|256083898|ref|XP_002578172.1| hypothetical protein [Schistosoma mansoni]
Length = 1108
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 41 SYRDTNFTGRSIARIFHGIPSPNFPAIVFGR-NRYWRSHMDQDFGLLCKLAARELI 95
S D TGR+IA IFHGI +P+FPA + R+W+ H+D D+ + K+A +EL+
Sbjct: 1047 SSLDRKITGRTIANIFHGISTPHFPATTWSYCRRFWKVHLDIDWRTIKKIATQELL 1102
>gi|224110762|ref|XP_002315627.1| predicted protein [Populus trichocarpa]
gi|222864667|gb|EEF01798.1| predicted protein [Populus trichocarpa]
Length = 901
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPS 61
L+ K+ YF+D+ D P L +DI + FT R+IARI HGI S
Sbjct: 802 LQRKILDYFKDDGRRDI--PNKMGQSSSFLRADIKVFLQGNSQAKFTPRAIARIMHGIAS 859
Query: 62 PNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELI 95
P +P+ + R +W + DF ++ + A EL+
Sbjct: 860 PAYPSATWSRTHFWGRYTQIDFQVVMEAAKVELM 893
>gi|255547870|ref|XP_002514992.1| rothmund-thomson syndrome DNA helicase recq4, putative [Ricinus
communis]
gi|223546043|gb|EEF47546.1| rothmund-thomson syndrome DNA helicase recq4, putative [Ricinus
communis]
Length = 852
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKED-LLISDIHSLVNSYRDTNFTGRSIARIFHGIP 60
L+ K+ YF+++ D T K+ + L +DI + S FT R+IARI GIP
Sbjct: 753 LQRKILDYFKEDGRNDITN---KMRQSSPFLRADIKVFLQSNSQAKFTPRAIARIMQGIP 809
Query: 61 SPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELI 95
SP +P+ + + +W + DF ++ + A EL+
Sbjct: 810 SPAYPSATWSKTHFWGRYTHIDFQVVMEAAKTELM 844
>gi|358337625|dbj|GAA55978.1| ATP-dependent DNA helicase Q4 [Clonorchis sinensis]
Length = 690
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 46 NFTGRSIARIFHGIPSPNFPAIVFGR-NRYWRSHMDQDFGLLCKLAARELI 95
+ +GR++A +FHGI +P +P+ + R R+WRSH+D D+ + ++A +E++
Sbjct: 635 SLSGRTVANLFHGISTPQYPSSTWARCRRFWRSHLDVDWPRIQQIATKEIL 685
>gi|145346749|ref|XP_001417846.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578074|gb|ABO96139.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 685
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 2 LKSKLRRYFQDENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTN-------FTGRSIAR 54
L+ L Y +++D+ + PE + LL DI +L+ ++R T R+IAR
Sbjct: 575 LRQCLAEYLNEDSDMLPSPPECVKQESQLLAPDIKTLL-AHRSGGKVGGAGMMTARAIAR 633
Query: 55 IFHGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKLR 98
+ H + SP +P+ + R+ W H + DF ++ A + K R
Sbjct: 634 VLHKLHSPAYPSKEWSRHHTWGRHAEVDFKVILSRAEEAIAKAR 677
>gi|303275199|ref|XP_003056898.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461250|gb|EEH58543.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 676
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 48 TGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELI 95
+ R++AR+ HG+ SP FPA + R+R W H DF L+ ++A+ EL+
Sbjct: 629 SARAVARVLHGLGSPAFPAQEWRRHRLWERHGSTDFALVMRVASEELL 676
>gi|255077928|ref|XP_002502544.1| predicted protein [Micromonas sp. RCC299]
gi|226517809|gb|ACO63802.1| predicted protein [Micromonas sp. RCC299]
Length = 652
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 48 TGRSIARIFHGIPSPNFPAIVFGRN----RYWRSHMDQDFGLLCKLAARELIKLR 98
+ R++AR+ HG+ SP +PA + RN R W ++ DF LL K+A+ EL+ +R
Sbjct: 592 SARAVARVLHGLGSPAYPAQEWRRNDIGKRMWEKYVGTDFNLLVKVASEELLAMR 646
>gi|356528251|ref|XP_003532718.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Glycine max]
Length = 861
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 30 LLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKL 89
L +DI + S FT R++AR+ HGI SP +P+ + + +W + DF ++ +
Sbjct: 788 FLRADIKVFLQSNSQARFTPRAVARVMHGIASPAYPSTAWSKTHFWGRYTHIDFQVVMEA 847
Query: 90 AAREL 94
A EL
Sbjct: 848 AKEEL 852
>gi|384245105|gb|EIE18601.1| ATP-dependent DNA helicase [Coccomyxa subellipsoidea C-169]
Length = 891
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 7 RRYFQDENDVD-----ATAPEIK----LTKEDLLISDIHSLVNSYRD----TNFTGRSIA 53
++YF+ E D A A E + T + + D+ L+ TGR++A
Sbjct: 786 KQYFEAEEDSSGAGQSAEAEEAEGLPLETASNFMAKDVRMLLRESASIKVGAQLTGRAVA 845
Query: 54 RIFHGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAAREL 94
RI HG+ S FPA + + YW + + DF + +A EL
Sbjct: 846 RILHGLSSSAFPAAQWNKCGYWARYGNVDFDAVLAVAEAEL 886
>gi|307110117|gb|EFN58354.1| hypothetical protein CHLNCDRAFT_142420 [Chlorella variabilis]
Length = 1296
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 47 FTGRSIARIFHGIPSPNFPAIVFGRNR--YWRSHMDQDFGLLCKLA 90
+GR++ARI HG+ SP FP +G+ +W S M DF + K A
Sbjct: 1243 LSGRALARILHGVGSPAFPPDPWGKRMGAFWGSQMHVDFAAVLKAA 1288
>gi|356510887|ref|XP_003524165.1| PREDICTED: uncharacterized protein LOC100783165 [Glycine max]
Length = 1272
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 30 LLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGRNRYW 75
L +D+ + S FT R++AR+ HGI SP +P+ + + +W
Sbjct: 1061 FLRADLKVFLQSNSHARFTPRAVARVMHGIASPAYPSTAWSKTHFW 1106
>gi|426235945|ref|XP_004011937.1| PREDICTED: ATP-dependent DNA helicase Q4, partial [Ovis aries]
Length = 1214
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 61 SPNFPAIVFGRNR-YWRSHMDQDFGLLCKLAARELI 95
SP +PA VFGR+R +WR ++ F L LA +EL+
Sbjct: 1175 SPCYPAQVFGRDRRFWRKYLHLSFPALMHLATQELL 1210
>gi|294940953|ref|XP_002782939.1| rothmund-thomson syndrome dna helicase recq4, putative [Perkinsus
marinus ATCC 50983]
gi|239895121|gb|EER14735.1| rothmund-thomson syndrome dna helicase recq4, putative [Perkinsus
marinus ATCC 50983]
Length = 1178
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 48 TGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKL 89
T SIARI GIPSP +P + YW H F +L +
Sbjct: 1126 TPTSIARILQGIPSPTYPTKAWKDTPYWGRHEALPFDVLTSM 1167
>gi|298715324|emb|CBJ27952.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 2200
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 43 RDTNFTGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDF 83
+D R++AR+FHGI S +FPA + + +W + F
Sbjct: 2144 KDVPMLARAVARVFHGIGSVSFPATKWRESAFWARYRHHSF 2184
>gi|325181565|emb|CCA16015.1| ATPdependent DNA helicase putative [Albugo laibachii Nc14]
Length = 1474
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 2 LKSKLRRYFQDEND-------VDATAPEIKLTKEDLLISDIHSLVNSYRDTN-FTGRSIA 53
L+ +L YF D+ ++ P + + K +++ DI+ L+ + +T ++
Sbjct: 1353 LEQQLTSYFDDKYCKKQCKLLIEDLIPTLSVDKHRMIVEDINELLLTDSGVEVWTSMNVT 1412
Query: 54 RIFHGIPSPNFPAIVFGRNRYWRSHMDQDF 83
++ HGI SP FP + ++ W H + F
Sbjct: 1413 KVLHGIGSPKFPQQKWRDHKLWGKHENVAF 1442
>gi|167517271|ref|XP_001742976.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778075|gb|EDQ91690.1| predicted protein [Monosiga brevicollis MX1]
Length = 1241
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 1 MLKSKLRRYFQ-DENDVDATAPEIKLTKEDLLISDIHSLVN--SYRDTNFTGRSIARIFH 57
+++ +L +YF+ E + ++ ++ E L IH+ + S + T R +ARI +
Sbjct: 1141 LIRQRLEKYFEATEPSLQSSLGGKRIQDEAPLRRAIHAFLERRSPDERRLTPRVVARIAY 1200
Query: 58 GIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIKL 97
GI SP FP+ + + W F L +A + LI L
Sbjct: 1201 GIGSPAFPSEDWWNSSLWAKFRPIAFEQLMSIAQQVLIDL 1240
>gi|341875030|gb|EGT30965.1| hypothetical protein CAEBREN_12265 [Caenorhabditis brenneri]
Length = 1881
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 13 ENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPS------PNFPA 66
EN TA I +T +D + I +L N + TG S+ +PS PNFP
Sbjct: 1759 ENIPKETAFRIVVTLDDYIFPCISNLANIRNNLLETGHSVE--VQLVPSGHVFFVPNFPH 1816
Query: 67 IVFGRNRYWRSHMDQDFGLLCKLAAR 92
I FG N++ M FG C L A+
Sbjct: 1817 IPFGYNKFLNIQM--GFGGECNLVAK 1840
>gi|429329248|gb|AFZ81007.1| signal peptide-containing protein [Babesia equi]
Length = 502
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 12 DENDVDATAPEIKLTKEDLLISDIHSLVNSYRDTNFTGRSIARIFHGIPSPNFPAIVFGR 71
DE+ V AT + LTK D D+H+ S +F G S FH ++V GR
Sbjct: 273 DESQVTATPITLDLTKPDETKLDVHTETES--GVSFKGYSSKDAFH------ISSVVEGR 324
Query: 72 NRYWRSHMDQDFGLLCKLAAR 92
WR+ D+ +L KL+++
Sbjct: 325 TSVWRASGDEKC-VLAKLSSK 344
>gi|301099871|ref|XP_002899026.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104338|gb|EEY62390.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 813
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 47 FTGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIK 96
+T ++A++FHG+ +P P + + WR + D F + ++A R L++
Sbjct: 750 WTSYAVAKVFHGLTTPQLPTRQWRDHVCWRRYSDVAFERIVQIANRVLVE 799
>gi|301099873|ref|XP_002899027.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104339|gb|EEY62391.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 941
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 47 FTGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIK 96
+T ++A++FHG+ +P P + + WR + D F + ++A R L++
Sbjct: 878 WTSYAVAKVFHGLTTPQLPTRQWRDHVCWRRYSDVAFERIVQIANRVLVE 927
>gi|301099877|ref|XP_002899029.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104341|gb|EEY62393.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 941
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 47 FTGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIK 96
+T ++A++FHG+ +P P + + WR + D F + ++A R L++
Sbjct: 878 WTSYAVAKVFHGLTTPQLPTRQWRDHVCWRRYSDVAFERIVQIANRVLVE 927
>gi|301099875|ref|XP_002899028.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104340|gb|EEY62392.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 944
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 47 FTGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIK 96
+T ++A++FHG+ +P P + + WR + D F + ++A R L++
Sbjct: 881 WTSYAVAKVFHGLTTPQLPTRQWRDHVCWRRYSDVAFERIVQIANRVLVE 930
>gi|301099867|ref|XP_002899024.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104336|gb|EEY62388.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 763
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 44 DTNFTGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIK 96
+ +T ++A++FHG+ +P P + + WR + D F + ++A R L++
Sbjct: 697 EITWTSYAVAKVFHGLTTPQLPTRQWRDHVCWRRYSDVAFERIVQIANRVLVE 749
>gi|301099865|ref|XP_002899023.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104335|gb|EEY62387.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1065
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 47 FTGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIK 96
+T ++A++FHG+ +P P + + WR + D F + ++A R L++
Sbjct: 1002 WTSYAVAKVFHGLTTPQLPTRQWRDHVCWRRYSDVAFERIVQIANRVLVE 1051
>gi|301099869|ref|XP_002899025.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104337|gb|EEY62389.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 746
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 47 FTGRSIARIFHGIPSPNFPAIVFGRNRYWRSHMDQDFGLLCKLAARELIK 96
+T ++A++FHG+ +P P + + WR + D F + ++A R L++
Sbjct: 683 WTSYAVAKVFHGLTTPQLPTRQWRDHVCWRRYSDVAFERIVQIANRVLVE 732
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.140 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,586,588,177
Number of Sequences: 23463169
Number of extensions: 61149914
Number of successful extensions: 153565
Number of sequences better than 100.0: 134
Number of HSP's better than 100.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 153360
Number of HSP's gapped (non-prelim): 137
length of query: 98
length of database: 8,064,228,071
effective HSP length: 67
effective length of query: 31
effective length of database: 6,492,195,748
effective search space: 201258068188
effective search space used: 201258068188
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)