BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4190
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2ANX9|ZN711_MOUSE Zinc finger protein 711 OS=Mus musculus GN=Znf711 PE=3 SV=1
Length = 761
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 15 EKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRP 49
+K P H+C C +E ++G L RHLL+ K P
Sbjct: 470 DKEPKMHKCKYCDYETAEQGLLNRHLLAVHSKSFP 504
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 21 HQCPSCLFEDNQKGKLTRHLLSCAKKYRPERNQV 54
HQCP C + L RH++S K P + +V
Sbjct: 590 HQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEV 623
>sp|Q9Y462|ZN711_HUMAN Zinc finger protein 711 OS=Homo sapiens GN=ZNF711 PE=1 SV=2
Length = 761
Score = 33.5 bits (75), Expect = 0.38, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 15 EKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRP 49
+K P H+C C +E ++G L RHLL+ K P
Sbjct: 470 DKEPKMHKCKYCDYETAEQGLLNRHLLAVHSKNFP 504
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 21 HQCPSCLFEDNQKGKLTRHLLSCAKKYRPERNQV 54
HQCP C + L RH++S K P + +V
Sbjct: 590 HQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEV 623
>sp|A7Y7X5|ZN711_DANRE Zinc finger protein 711 OS=Danio rerio GN=znf711 PE=1 SV=1
Length = 761
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 15 EKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKK 46
+K P H+C C +E ++G L RHLL+ K
Sbjct: 470 DKEPKLHKCKYCEYETAEQGLLNRHLLAVHSK 501
>sp|Q867Z4|LOLA4_DROME Longitudinals lacking protein, isoforms F/I/K/T OS=Drosophila
melanogaster GN=lola PE=1 SV=1
Length = 970
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Query: 21 HQCPSCLFEDNQKGKLTRHLLSCAKKYRPERNQVRKGEG 59
H CP C ++ Q+G L H+ +K+ PE+ Q+ G
Sbjct: 933 HPCPYCSYKAKQRGNLGVHV----RKHHPEKPQLESKRG 967
>sp|Q95LI3|ZFY_BOVIN Zinc finger Y-chromosomal protein OS=Bos taurus GN=ZFY PE=2 SV=1
Length = 801
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 8 HNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRP 49
H + + + A H+C C +E ++G L RHLL+ K P
Sbjct: 502 HKMVHKEKGASKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP 543
>sp|P17010|ZFX_HUMAN Zinc finger X-chromosomal protein OS=Homo sapiens GN=ZFX PE=2 SV=2
Length = 805
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 8 HNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRP 49
H + + + A H+C C +E ++G L RHLL+ K P
Sbjct: 506 HKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP 547
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 2 YHMEAEHNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRPER-NQVRKG 57
+H +E K HQC C F+ L+RH+LS K P R + RKG
Sbjct: 671 FHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKG 727
>sp|O62836|ZFX_BOVIN Zinc finger X-chromosomal protein OS=Bos taurus GN=ZFX PE=2 SV=2
Length = 800
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 8 HNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRP 49
H + + + A H+C C +E ++G L RHLL+ K P
Sbjct: 501 HKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP 542
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 2 YHMEAEHNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRPER-NQVRKG 57
+H +E K HQC C F+ L+RH+LS K P R + RKG
Sbjct: 666 FHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKG 722
>sp|Q6B4Z5|ZFY_PANTR Zinc finger Y-chromosomal protein OS=Pan troglodytes GN=ZFY PE=2
SV=1
Length = 801
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 8 HNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRP 49
H + + + A H+C C +E ++G L RHLL+ K P
Sbjct: 502 HKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP 543
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 2 YHMEAEHNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRPER-NQVRKG 57
+H +E + K HQC C F+ L+RH+LS K P R + RKG
Sbjct: 667 FHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKG 723
>sp|P08048|ZFY_HUMAN Zinc finger Y-chromosomal protein OS=Homo sapiens GN=ZFY PE=1 SV=3
Length = 801
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 8 HNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRP 49
H + + + A H+C C +E ++G L RHLL+ K P
Sbjct: 502 HKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP 543
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 2 YHMEAEHNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRPER-NQVRKG 57
+H +E + K HQC C F+ L+RH+LS K P R + RKG
Sbjct: 667 FHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKG 723
>sp|P17012|ZFX_MOUSE Zinc finger X-chromosomal protein OS=Mus musculus GN=Zfx PE=1 SV=2
Length = 799
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 8 HNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRP 49
H + + + A H+C C +E ++G L RHLL+ K P
Sbjct: 500 HKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP 541
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 2 YHMEAEHNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRPER-NQVRKG 57
+H +E K HQC C F+ L+RH+LS K P R + RKG
Sbjct: 665 FHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKG 721
>sp|Q52V16|ZFY_GORGO Zinc finger Y-chromosomal protein OS=Gorilla gorilla gorilla GN=ZFY
PE=3 SV=1
Length = 801
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 8 HNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRP 49
H + + + A H+C C +E ++G L RHLL+ K P
Sbjct: 502 HKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP 543
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 2 YHMEAEHNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRPER-NQVRKG 57
+H +E + K HQC C F+ L+RH+LS K P R + RKG
Sbjct: 667 FHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKG 723
>sp|P23607|ZFA_MOUSE Zinc finger autosomal protein OS=Mus musculus GN=Zfa PE=2 SV=1
Length = 742
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 8 HNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRP 49
H + + + A H+C C +E ++G L RHLL+ K P
Sbjct: 443 HKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP 484
>sp|Q298N4|ZFPL1_DROPS Zinc finger protein-like 1 homolog OS=Drosophila pseudoobscura
pseudoobscura GN=GA18838 PE=3 SV=1
Length = 302
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 15 EKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRPERNQVRKGEGPLFTIAED 67
AP HQCP C E L + K Y + N R G G L ++ED
Sbjct: 89 NTAPRGHQCPGCSVEIFPNTNLVSPVADALKNYLAQVNWGRNGLG-LALLSED 140
>sp|Q01611|ZFY1_XENLA Zinc finger Y-chromosomal protein 1 OS=Xenopus laevis GN=zfy1 PE=2
SV=1
Length = 794
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 2 YHMEAEHNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRPER-NQVRKG 57
+H +E K HQC C F L+RH+LS K P R + +KG
Sbjct: 660 FHRPSELKKHEAAHKGKKMHQCRHCEFHIADPFVLSRHILSVHTKELPYRCKRCKKG 716
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,288,009
Number of Sequences: 539616
Number of extensions: 1216478
Number of successful extensions: 2402
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2341
Number of HSP's gapped (non-prelim): 65
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)