BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy4190
MYHMEAEHNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRPERNQVRKGEGP
LFTIAEDSGFCWVLQFSLSYTSVPLRSGLS

High Scoring Gene Products

Symbol, full name Information P value
MEP-1 protein from Drosophila melanogaster 2.2e-12

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy4190
        (90 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0035357 - symbol:MEP-1 species:7227 "Drosophila me...   179  2.2e-12   1


>FB|FBgn0035357 [details] [associations]
            symbol:MEP-1 species:7227 "Drosophila melanogaster"
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0048813 "dendrite
            morphogenesis" evidence=IMP] [GO:0070615 "nucleosome-dependent
            ATPase activity" evidence=IDA] [GO:0003682 "chromatin binding"
            evidence=IDA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005700 "polytene chromosome" evidence=IDA] [GO:0016581 "NuRD
            complex" evidence=IPI] InterPro:IPR007087 InterPro:IPR015880
            PROSITE:PS00028 SMART:SM00355 EMBL:AE014296 GO:GO:0008270
            GO:GO:0006200 GO:GO:0003682 GO:GO:0016887 GO:GO:0000122
            GO:GO:0048813 GO:GO:0005700 HOGENOM:HOG000059717 GO:GO:0016581
            eggNOG:NOG87302 CTD:38327 GeneTree:ENSGT00390000000042
            RefSeq:NP_001137875.1 RefSeq:NP_647733.1 RefSeq:NP_728761.1
            RefSeq:NP_728762.1 RefSeq:NP_728763.1 RefSeq:NP_728764.1
            RefSeq:NP_728765.1 UniGene:Dm.11285 SMR:Q0E8J0 IntAct:Q0E8J0
            STRING:Q0E8J0 EnsemblMetazoa:FBtr0072931 EnsemblMetazoa:FBtr0072932
            EnsemblMetazoa:FBtr0072933 EnsemblMetazoa:FBtr0072934
            EnsemblMetazoa:FBtr0072935 EnsemblMetazoa:FBtr0072936
            EnsemblMetazoa:FBtr0290340 GeneID:38327 KEGG:dme:Dmel_CG1244
            UCSC:CG1244-RA FlyBase:FBgn0035357 InParanoid:Q0E8J0 OMA:RITNMES
            OrthoDB:EOG4QJQ34 GenomeRNAi:38327 NextBio:808046 Uniprot:Q0E8J0
        Length = 1152

 Score = 179 (68.1 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 32/52 (61%), Positives = 38/52 (73%)

Query:     1 MYHMEAEHNVRGRLEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRPERN 52
             +YHMEA HN++ RL K   +HQCP+C FEDN K KL RH   CAKK+RPE N
Sbjct:   726 VYHMEAVHNIKARLIKPLPYHQCPNCGFEDNGKAKLARHQPVCAKKFRPELN 777


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       90        90   0.00091  102 3  11 22  0.46    29
                                                     29  0.39    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  564 (60 KB)
  Total size of DFA:  119 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.78u 0.07s 10.85t   Elapsed:  00:00:11
  Total cpu time:  10.78u 0.07s 10.85t   Elapsed:  00:00:11
  Start:  Thu Aug 15 13:57:15 2013   End:  Thu Aug 15 13:57:26 2013

Back to top