RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4190
         (90 letters)



>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's
          yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 273

 Score = 27.9 bits (62), Expect = 0.12
 Identities = 9/51 (17%), Positives = 15/51 (29%), Gaps = 2/51 (3%)

Query: 23 CPSCLFEDNQKGKLTRHLLSCAKKYRPERNQVRKGEGPLFTI--AEDSGFC 71
              L     K +  R+   C  ++ P     R      F I   +   +C
Sbjct: 37 DDFTLQYFGSKKQYERYRKKCTLRHPPGNEIYRDDYVSFFEIDGRKQRTWC 87


>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3
          {Human (Homo sapiens) [TaxId: 9606]}
          Length = 270

 Score = 25.9 bits (57), Expect = 0.75
 Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 2/51 (3%)

Query: 23 CPSCLFEDNQKGKLTRHLLSCAKKYRPERNQVRKGEGPLFTI--AEDSGFC 71
          C  CL     +  L +H+  C   + P     RK    +F +     + +C
Sbjct: 34 CEFCLKYMKSRTILQQHMKKCGWFHPPANEIYRKNNISVFEVDGNVSTIYC 84


>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal
           domain {Paracoccus denitrificans [TaxId: 266]}
          Length = 459

 Score = 25.5 bits (56), Expect = 0.91
 Identities = 6/21 (28%), Positives = 9/21 (42%)

Query: 53  QVRKGEGPLFTIAEDSGFCWV 73
           +   G GPL T  +  G  + 
Sbjct: 324 EPELGLGPLHTAFDGRGNAYT 344


>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
          MYST1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 271

 Score = 25.5 bits (56), Expect = 1.0
 Identities = 11/45 (24%), Positives = 14/45 (31%)

Query: 14 LEKAPAFHQCPSCLFEDNQKGKLTRHLLSCAKKYRPERNQVRKGE 58
            K P    C  CL     +     HL  C  +  P +   RK  
Sbjct: 25 YGKQPKLWLCEYCLKYMKYEKSYRFHLGQCQWRQPPGKEIYRKSN 69


>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 29

 Score = 21.5 bits (45), Expect = 7.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)

Query: 23 CPSCLFEDNQKGKLTRHLLSCA 44
          C  C F    KG LT+H+ S A
Sbjct: 4  CTYCNFSFKTKGNLTKHMKSKA 25


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.135    0.428 

Gapped
Lambda     K      H
   0.267   0.0636    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 321,693
Number of extensions: 11990
Number of successful extensions: 34
Number of sequences better than 10.0: 1
Number of HSP's gapped: 34
Number of HSP's successfully gapped: 6
Length of query: 90
Length of database: 2,407,596
Length adjustment: 54
Effective length of query: 36
Effective length of database: 1,666,176
Effective search space: 59982336
Effective search space used: 59982336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.1 bits)