BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4191
(443 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|170053288|ref|XP_001862604.1| negative elongation factor B [Culex quinquefasciatus]
gi|167873859|gb|EDS37242.1| negative elongation factor B [Culex quinquefasciatus]
Length = 590
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 279/427 (65%), Positives = 314/427 (73%), Gaps = 71/427 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVM ILRNT HIDDKYLR+LVRDRELY+DTDTEVKRQIW+DNQS
Sbjct: 102 LLVKSFPVVRVKALRPVVMCILRNTAHIDDKYLRILVRDRELYQDTDTEVKRQIWRDNQS 161
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 162 LFGDEVSPLLSQYIREKEHILFDHLNLNNLFFTPTP------------------------ 197
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLAHMIG+SVKLYDMVLQFLRT
Sbjct: 198 ----------------------------KVRRQGEVVQKLAHMIGNSVKLYDMVLQFLRT 229
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+QDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 230 LFLRTRNVHYCTLRAELLMALHDLEVQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 289
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLATSA+KIL +LINNE LPRENT+L+LLLRM
Sbjct: 290 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILQHLINNEGLPRENTILILLLRM 349
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAW+MID+Q ++ + + L MV +R L +
Sbjct: 350 LALGLSAWIMIDSQDFKEPKLDSQVVTKFLPALMSL--MVDDQVRNLHAKLPPDERESAI 407
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDAV+AY+QESSVA I++MYYTLHTAR +DRVG++RV+ +LA+ + DRA++
Sbjct: 408 TTIEHSGPAPDAVEAYIQESSVASILAMYYTLHTARQKDRVGILRVMAILASCKDDRAYE 467
Query: 404 DPFLHFL 410
DPFLH L
Sbjct: 468 DPFLHSL 474
>gi|157106897|ref|XP_001649534.1| hypothetical protein AaeL_AAEL014752 [Aedes aegypti]
gi|108868768|gb|EAT32993.1| AAEL014752-PA [Aedes aegypti]
Length = 588
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 278/434 (64%), Positives = 318/434 (73%), Gaps = 71/434 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVM ILRNT+HIDDKYLR+LVRDRELY+DTDTEVKRQIW+DNQS
Sbjct: 102 LLVKSFPVVRVKALRPVVMCILRNTSHIDDKYLRILVRDRELYQDTDTEVKRQIWRDNQS 161
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 162 LFGDEVSPLLSQYIREKEHILFDHMNLNNLFFTPTP------------------------ 197
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLAHMIG+SVKLYDMVLQFLRT
Sbjct: 198 ----------------------------KVRRQGEVVQKLAHMIGNSVKLYDMVLQFLRT 229
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+QDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 230 LFLRTRNVHYCTLRAELLMALHDLEVQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 289
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLATSA+KIL +LINNE LPR+NT+L+LLLRM
Sbjct: 290 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILQHLINNEGLPRDNTILILLLRM 349
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAW+MID+Q ++ + + L MV +R L +
Sbjct: 350 LALGLSAWIMIDSQDFKEPKLDSQVVTKFLPALMSL--MVDDQVRNLHAKLPPDERESAI 407
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDAV+AY+QES+VA I++MYYTLHTAR +DRVG++RV+ +LA+ + DRA++
Sbjct: 408 TTIEHSGPAPDAVEAYIQESAVASILAMYYTLHTARQKDRVGILRVMAILASCKDDRAYE 467
Query: 404 DPFLHFLSSYEISL 417
DPFLH L + I +
Sbjct: 468 DPFLHSLIALMIPM 481
>gi|193627464|ref|XP_001951169.1| PREDICTED: negative elongation factor B-like [Acyrthosiphon pisum]
Length = 590
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 280/427 (65%), Positives = 313/427 (73%), Gaps = 71/427 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
ML KSFP V +KQLRP++MAIL+N +HIDDKYL VLV+D ELYKDTDTEVKRQIWKDNQS
Sbjct: 107 MLAKSFPSVHIKQLRPIIMAILKNISHIDDKYLNVLVKDTELYKDTDTEVKRQIWKDNQS 166
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
L +EVSPLL+QYIREKENILFDH+NLTNLFF P+ PKL
Sbjct: 167 LLVNEVSPLLTQYIREKENILFDHNNLTNLFFTPS------PKL---------------- 204
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
R GEVVQKLAHMIGSSVKLYDMVLQFLRT
Sbjct: 205 ------------------------------RRQGEVVQKLAHMIGSSVKLYDMVLQFLRT 234
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRTHNVHYCTLRAELLMALHDLEIQDIIS+DPCHKFTWCLDACIRE+NVD+KRSRELQ
Sbjct: 235 LFLRTHNVHYCTLRAELLMALHDLEIQDIISIDPCHKFTWCLDACIRERNVDVKRSRELQ 294
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLDSIKRGHE VLGDLSMTLCDPYAINFLATS ++ILH+LINNE LPREN VLVLLLRM
Sbjct: 295 GFLDSIKRGHETVLGDLSMTLCDPYAINFLATSTIRILHHLINNENLPRENHVLVLLLRM 354
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
L+LGLSAWVMIDTQ ++ + + L MV +R L +
Sbjct: 355 LSLGLSAWVMIDTQDFKEPKLDSQVVTKFMPALMSL--MVDDQVRALNTKMPPDERESAI 412
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H PVPDAVQAY+QESSVAC ++MYYTLH A+++DR+ LMR+LG LA + DRAF+
Sbjct: 413 TIIEHSGPVPDAVQAYIQESSVACTVAMYYTLHVAKAKDRLALMRILGSLANCDHDRAFE 472
Query: 404 DPFLHFL 410
DPFLHFL
Sbjct: 473 DPFLHFL 479
>gi|195036506|ref|XP_001989711.1| GH18941 [Drosophila grimshawi]
gi|193893907|gb|EDV92773.1| GH18941 [Drosophila grimshawi]
Length = 592
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/427 (65%), Positives = 314/427 (73%), Gaps = 71/427 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYLRVLVRDRELY DTDTEVKRQIW+DNQS
Sbjct: 102 LLVKSFPVVRVKYLRPVVMAILRNTQHIDDKYLRVLVRDRELYADTDTEVKRQIWRDNQS 161
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL+NLFF PTP
Sbjct: 162 LFGDEVSPLLSQYIREKEHILFDHSNLSNLFFQPTP------------------------ 197
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLA MIG+SVKLYDMVLQFLRT
Sbjct: 198 ----------------------------KVRRQGEVVQKLAKMIGNSVKLYDMVLQFLRT 229
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+Q+IIS+DPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 230 LFLRTRNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQ 289
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLATSA+KIL +LINN+ +PR+N +L+LLLRM
Sbjct: 290 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILQHLINNDGIPRDNQILILLLRM 349
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAWVMID+Q G ++ + + L MV R+L +
Sbjct: 350 LALGLSAWVMIDSQDFKEPKLDGQVVTKFLPALMSL--MVDDQCRSLHAKLPPDERESAL 407
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P P+AV+AY+QESSVA I+SMYYTLHTARSRDRVG++RVL +L+ + DRA++
Sbjct: 408 TIIEHSGPAPNAVEAYIQESSVASILSMYYTLHTARSRDRVGVLRVLAILSGCKDDRAYE 467
Query: 404 DPFLHFL 410
DPFLH L
Sbjct: 468 DPFLHSL 474
>gi|195353509|ref|XP_002043247.1| GM17461 [Drosophila sechellia]
gi|194127345|gb|EDW49388.1| GM17461 [Drosophila sechellia]
Length = 592
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 275/427 (64%), Positives = 313/427 (73%), Gaps = 71/427 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LVRDRELY DTDTEVKRQIW+DNQS
Sbjct: 103 LLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILVRDRELYADTDTEVKRQIWRDNQS 162
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 163 LFGDEVSPLLSQYIREKEHILFDHTNLNNLFFHPTP------------------------ 198
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLA+MIG+SVKLYDMVLQFLRT
Sbjct: 199 ----------------------------KVRRQGEVVQKLANMIGTSVKLYDMVLQFLRT 230
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+Q+IIS+DPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 231 LFLRTRNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQ 290
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLATSA+KILH+LINNE +PR+N +L+LLLRM
Sbjct: 291 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILHHLINNEGMPRDNQILILLLRM 350
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAWVMID+Q ++ + + L MV R+L +
Sbjct: 351 LALGLSAWVMIDSQDFKEPKLDCQVVTKFLPALMSL--MVDDQCRSLHAKLPPDERESAL 408
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDAV+AY+QESSVA I++MYYTLHTAR +DRVG++RVL +L+ + DRA++
Sbjct: 409 TTIEHSGPAPDAVEAYIQESSVASILAMYYTLHTARLKDRVGVLRVLAILSACKDDRAYE 468
Query: 404 DPFLHFL 410
DPFLH L
Sbjct: 469 DPFLHSL 475
>gi|18857943|ref|NP_572402.1| NELF-B [Drosophila melanogaster]
gi|38372398|sp|Q9Y113.1|NELFB_DROME RecName: Full=Negative elongation factor B
gi|5052608|gb|AAD38634.1|AF145659_1 BcDNA.GH10333 [Drosophila melanogaster]
gi|7290825|gb|AAF46268.1| NELF-B [Drosophila melanogaster]
gi|220943838|gb|ACL84462.1| CG32721-PA [synthetic construct]
gi|220960322|gb|ACL92697.1| NELF-B-PA [synthetic construct]
Length = 594
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 275/427 (64%), Positives = 313/427 (73%), Gaps = 71/427 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LVRDRELY DTDTEVKRQIW+DNQS
Sbjct: 105 LLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILVRDRELYADTDTEVKRQIWRDNQS 164
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 165 LFGDEVSPLLSQYIREKEHILFDHTNLNNLFFHPTP------------------------ 200
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLA+MIG+SVKLYDMVLQFLRT
Sbjct: 201 ----------------------------KVRRQGEVVQKLANMIGTSVKLYDMVLQFLRT 232
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+Q+IIS+DPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 233 LFLRTRNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQ 292
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLATSA+KILH+LINNE +PR+N +L+LLLRM
Sbjct: 293 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILHHLINNEGMPRDNQILILLLRM 352
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAWVMID+Q ++ + + L MV R+L +
Sbjct: 353 LALGLSAWVMIDSQDFKEPKLDCQVVTKFLPALMSL--MVDDQCRSLHAKLPPDERESAL 410
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDAV+AY+QESSVA I++MYYTLHTAR +DRVG++RVL +L+ + DRA++
Sbjct: 411 TTIEHSGPAPDAVEAYIQESSVASILAMYYTLHTARLKDRVGVLRVLAILSACKDDRAYE 470
Query: 404 DPFLHFL 410
DPFLH L
Sbjct: 471 DPFLHSL 477
>gi|194896912|ref|XP_001978559.1| GG17612 [Drosophila erecta]
gi|190650208|gb|EDV47486.1| GG17612 [Drosophila erecta]
Length = 592
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 275/427 (64%), Positives = 313/427 (73%), Gaps = 71/427 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LVRDRELY DTDTEVKRQIW+DNQS
Sbjct: 103 LLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILVRDRELYADTDTEVKRQIWRDNQS 162
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 163 LFGDEVSPLLSQYIREKEHILFDHTNLNNLFFQPTP------------------------ 198
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLA+MIG+SVKLYDMVLQFLRT
Sbjct: 199 ----------------------------KVRRQGEVVQKLANMIGTSVKLYDMVLQFLRT 230
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+Q+IIS+DPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 231 LFLRTRNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQ 290
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLATSA+KILH+LINNE +PR+N +L+LLLRM
Sbjct: 291 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILHHLINNEGMPRDNQILILLLRM 350
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAWVMID+Q ++ + + L MV R+L +
Sbjct: 351 LALGLSAWVMIDSQDFKEPKLDCQVVTKFLPALMSL--MVDDQCRSLHAKLPPDERESAL 408
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDAV+AY+QESSVA I++MYYTLHTAR +DRVG++RVL +L+ + DRA++
Sbjct: 409 TTIEHSGPAPDAVEAYIQESSVASILAMYYTLHTARLKDRVGVLRVLAILSACKDDRAYE 468
Query: 404 DPFLHFL 410
DPFLH L
Sbjct: 469 DPFLHSL 475
>gi|195398977|ref|XP_002058097.1| GJ15676 [Drosophila virilis]
gi|194150521|gb|EDW66205.1| GJ15676 [Drosophila virilis]
Length = 631
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 273/427 (63%), Positives = 313/427 (73%), Gaps = 71/427 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYLR+LVRDRELY DTDTEVKRQIW+DNQS
Sbjct: 101 LLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLRILVRDRELYADTDTEVKRQIWRDNQS 160
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 161 LFGDEVSPLLSQYIREKEHILFDHTNLNNLFFQPTP------------------------ 196
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLA+MIG+SVKLYDMVLQFLRT
Sbjct: 197 ----------------------------KVRRQGEVVQKLANMIGTSVKLYDMVLQFLRT 228
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+Q+IIS+DPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 229 LFLRTRNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQ 288
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLA+SA+KIL +LINNE + R+N +L+LLLRM
Sbjct: 289 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLASSAIKILQHLINNEGMARDNQILILLLRM 348
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAWVMID+Q G ++ + + L MV R+L +
Sbjct: 349 LALGLSAWVMIDSQDFKEPKLDGQVVTKFLPALMSL--MVDDQCRSLHAKLPPDERESAL 406
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDAV+AY+QES+VA I++MYYTLHTAR++DRVG++RVL +L+ + DRA++
Sbjct: 407 TTIEHSGPAPDAVEAYIQESAVASILAMYYTLHTARAKDRVGVLRVLAILSVCKDDRAYE 466
Query: 404 DPFLHFL 410
DPFLH L
Sbjct: 467 DPFLHSL 473
>gi|195041727|ref|XP_001991305.1| GH12128 [Drosophila grimshawi]
gi|193901063|gb|EDV99929.1| GH12128 [Drosophila grimshawi]
Length = 598
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 272/426 (63%), Positives = 312/426 (73%), Gaps = 69/426 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYLR+LVRDRELY DTDTEVKRQIW+DNQS
Sbjct: 103 LLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLRILVRDRELYADTDTEVKRQIWRDNQS 162
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 163 LFGDEVSPLLSQYIREKEHILFDHTNLNNLFFQPTP------------------------ 198
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLA+MIG+SVKLYDMVLQFLRT
Sbjct: 199 ----------------------------KVRRQGEVVQKLANMIGTSVKLYDMVLQFLRT 230
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+Q+IIS+DPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 231 LFLRTRNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQ 290
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLA+SA+KILH+LINNE +PR+N VL+LLLRM
Sbjct: 291 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLASSAIKILHHLINNEGMPRDNQVLILLLRM 350
Query: 301 LALGLSAWVMIDTQG----------------GNILIEIFRSCFKLYDMVLQFLRTLFLRT 344
LALGLSAWVMID+Q + + + C L+ + R L T
Sbjct: 351 LALGLSAWVMIDSQDFKEPKLDCQVVTKFLPALMSLMVDDQCRGLHGKLPPDERESALTT 410
Query: 345 HNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDD 404
H P PDAV+AY+QES+V+ I++MYYTLH+AR++DRVG++RVL +L+ + DRA++D
Sbjct: 411 IE-HSGPAPDAVEAYIQESAVSSILAMYYTLHSARTKDRVGVLRVLAILSVCKDDRAYED 469
Query: 405 PFLHFL 410
PFLH L
Sbjct: 470 PFLHSL 475
>gi|195390466|ref|XP_002053889.1| GJ24126 [Drosophila virilis]
gi|194151975|gb|EDW67409.1| GJ24126 [Drosophila virilis]
Length = 592
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 274/427 (64%), Positives = 312/427 (73%), Gaps = 71/427 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYLR+L+RDRELY DTDTEVKRQIW+DNQS
Sbjct: 102 LLVKSFPVVRVKYLRPVVMAILRNTQHIDDKYLRILMRDRELYADTDTEVKRQIWRDNQS 161
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 162 LFGDEVSPLLSQYIREKEHILFDHTNLNNLFFQPTP------------------------ 197
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLA+MIG+SVKLYDMVLQFLRT
Sbjct: 198 ----------------------------KVRRQGEVVQKLANMIGNSVKLYDMVLQFLRT 229
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+Q+IIS+DPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 230 LFLRTRNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQ 289
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLATSA+KIL +LINNE +PR+N +L+LLLRM
Sbjct: 290 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILQHLINNEGMPRDNQILILLLRM 349
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAWVMID+Q ++ + + L MV R+L +
Sbjct: 350 LALGLSAWVMIDSQDFKEPKLDNQVVTKFLPALMSL--MVDDQCRSLHAKLPPDERESAL 407
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDAV+AY+QESSVA I++MYYTLHTAR +DRVG++RVL +L+ + DRA++
Sbjct: 408 TTIEHSGPAPDAVEAYIQESSVASILAMYYTLHTARVKDRVGVLRVLAILSACKDDRAYE 467
Query: 404 DPFLHFL 410
DPFLH L
Sbjct: 468 DPFLHSL 474
>gi|158300525|ref|XP_320419.3| AGAP012109-PA [Anopheles gambiae str. PEST]
gi|157013201|gb|EAA00225.3| AGAP012109-PA [Anopheles gambiae str. PEST]
Length = 566
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 275/427 (64%), Positives = 313/427 (73%), Gaps = 71/427 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVM ILRNT HI+DKYLR+LVRDRELY+DTDTEVKRQIW+DNQS
Sbjct: 80 LLVKSFPVVRVKALRPVVMCILRNTPHIEDKYLRILVRDRELYQDTDTEVKRQIWRDNQS 139
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 140 LFGDEVSPLLSQYIREKEHILFDHLNLNNLFFTPTP------------------------ 175
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLAHMIG+SVKLYDMVLQFLRT
Sbjct: 176 ----------------------------KVRRQGEVVQKLAHMIGNSVKLYDMVLQFLRT 207
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+QDIISVDPCHKFTWCLDACIREKNVD+KRSRELQ
Sbjct: 208 LFLRTRNVHYCTLRAELLMALHDLEVQDIISVDPCHKFTWCLDACIREKNVDMKRSRELQ 267
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLATSA+KIL +LINNE +PREN +LVLLLRM
Sbjct: 268 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILQHLINNEGMPRENLILVLLLRM 327
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAWVMID+Q ++ + + L MV +R L +
Sbjct: 328 LALGLSAWVMIDSQDFKEPKLDSQVVTKFLPALMSL--MVDDQVRHLHSKLPPDERESAI 385
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDAV+AY+QE++VA I++MYYTLHTAR +DRVG++RV+ +LA+ + DRA++
Sbjct: 386 TTIEHSGPAPDAVEAYIQENAVASILAMYYTLHTARQKDRVGILRVMAILASCKDDRAYE 445
Query: 404 DPFLHFL 410
DPFLH L
Sbjct: 446 DPFLHSL 452
>gi|194763164|ref|XP_001963703.1| GF21119 [Drosophila ananassae]
gi|190618628|gb|EDV34152.1| GF21119 [Drosophila ananassae]
Length = 591
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 273/426 (64%), Positives = 311/426 (73%), Gaps = 69/426 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LVRDRELY DTDTEVKRQIW+DNQS
Sbjct: 102 LLAKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILVRDRELYADTDTEVKRQIWRDNQS 161
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 162 LFGDEVSPLLSQYIREKEHILFDHTNLNNLFFQPTP------------------------ 197
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLA+MIG+SVKLYDMVLQFLRT
Sbjct: 198 ----------------------------KVRRQGEVVQKLANMIGTSVKLYDMVLQFLRT 229
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+Q+IIS+DPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 230 LFLRTRNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQ 289
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLATSA+KILH+LINNE +PR+N +L+LLLRM
Sbjct: 290 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILHHLINNEGMPRDNQILILLLRM 349
Query: 301 LALGLSAWVMIDTQG----------------GNILIEIFRSCFKLYDMVLQFLRTLFLRT 344
LALGLSAWVMID+Q + + + C L+ + R L T
Sbjct: 350 LALGLSAWVMIDSQDFKEPKLDCQVVTKFLPALMSLIVDDQCRSLHGKLPPDERESALTT 409
Query: 345 HNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDD 404
H P PDAV+AY++ESSVA I++MYYTLHTAR +DRVG++RVL +L+ + DRA++D
Sbjct: 410 IE-HSGPAPDAVEAYIRESSVASILAMYYTLHTARLKDRVGVLRVLAILSACKDDRAYED 468
Query: 405 PFLHFL 410
PFLH L
Sbjct: 469 PFLHSL 474
>gi|195108555|ref|XP_001998858.1| GI24199 [Drosophila mojavensis]
gi|193915452|gb|EDW14319.1| GI24199 [Drosophila mojavensis]
Length = 595
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 275/427 (64%), Positives = 311/427 (72%), Gaps = 71/427 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYLRVL+RDRELY DTDTEVKRQIW+DNQS
Sbjct: 102 LLVKSFPVVRVKHLRPVVMAILRNTQHIDDKYLRVLMRDRELYADTDTEVKRQIWRDNQS 161
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 162 LFGDEVSPLLSQYIREKEHILFDHTNLNNLFFQPTP------------------------ 197
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLA+MIG+SVKLYDMVLQFLRT
Sbjct: 198 ----------------------------KVRRQGEVVQKLANMIGNSVKLYDMVLQFLRT 229
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+Q+IIS+DPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 230 LFLRTRNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQ 289
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLATSA+KIL++LINNE +PR+N +L+LLLRM
Sbjct: 290 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILNHLINNEGMPRDNQILILLLRM 349
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAW MIDTQ ++ + + L MV R+L +
Sbjct: 350 LALGLSAWFMIDTQDFKEPKLDSQVVTKFLPALMSL--MVDDQCRSLHAKLPPDERESAL 407
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDAV+AY+QESSVA I++MYYTLHTAR +DRVGL+RVL +L+ + RA++
Sbjct: 408 TTIEHSGPAPDAVEAYIQESSVASILAMYYTLHTARVKDRVGLLRVLAILSACKDYRAYE 467
Query: 404 DPFLHFL 410
DPFLH L
Sbjct: 468 DPFLHSL 474
>gi|195133298|ref|XP_002011076.1| GI16340 [Drosophila mojavensis]
gi|193907051|gb|EDW05918.1| GI16340 [Drosophila mojavensis]
Length = 587
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 271/427 (63%), Positives = 311/427 (72%), Gaps = 71/427 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYLR+LVRDRELY DTDTEVKRQIW+DNQS
Sbjct: 102 LLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLRILVRDRELYADTDTEVKRQIWRDNQS 161
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 162 LFGDEVSPLLSQYIREKEHILFDHTNLNNLFFQPTP------------------------ 197
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLA+MIG+SVKLYDMVLQFLRT
Sbjct: 198 ----------------------------KVRRQGEVVQKLANMIGTSVKLYDMVLQFLRT 229
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+Q+IIS+DPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 230 LFLRTRNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQ 289
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLATS +KIL +LINNE +PR+N +L+LLLRM
Sbjct: 290 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSVIKILQHLINNEGMPRDNPILILLLRM 349
Query: 301 LALGLSAWVMIDTQG-------GNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAWVMID+Q ++ + + L MV R+L +
Sbjct: 350 LALGLSAWVMIDSQDFKEPKLDAQVVTKFLPALMSL--MVDDQCRSLHGKLPPDERESAL 407
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P P+AV+ Y+QESSV+ I++MYYTLHTAR++DRVG++RVL +L+ + DRA++
Sbjct: 408 TTIEHSGPAPEAVETYIQESSVSSILAMYYTLHTARTKDRVGVLRVLAILSGCKDDRAYE 467
Query: 404 DPFLHFL 410
DPFLH L
Sbjct: 468 DPFLHSL 474
>gi|195163772|ref|XP_002022723.1| GL14601 [Drosophila persimilis]
gi|194104746|gb|EDW26789.1| GL14601 [Drosophila persimilis]
Length = 590
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 272/427 (63%), Positives = 312/427 (73%), Gaps = 71/427 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LVRDRELY DTDTEVKRQIW+DNQS
Sbjct: 102 LLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILVRDRELYADTDTEVKRQIWRDNQS 161
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 162 LFGDEVSPLLSQYIREKEHILFDHTNLNNLFFHPTP------------------------ 197
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLA+MIG+SVKLYDMVLQFLRT
Sbjct: 198 ----------------------------KVRRQGEVVQKLANMIGTSVKLYDMVLQFLRT 229
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+Q+IIS+DPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 230 LFLRTRNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQ 289
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLATSA+KILH+LINNE +PR+N +L+LLLRM
Sbjct: 290 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILHHLINNEGMPRDNQILILLLRM 349
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAWVMID+Q ++ + + L MV R+L +
Sbjct: 350 LALGLSAWVMIDSQDFKEPKLDCQVVTKFLPALMSL--MVDDQCRSLHGKLPPDERESAL 407
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDAV+AY+QES+V+ I++MYYTLHTAR +DRVG++RVL +L+ + RA++
Sbjct: 408 TIIEHSGPAPDAVEAYIQESAVSSILAMYYTLHTARLKDRVGVLRVLAILSACKDHRAYE 467
Query: 404 DPFLHFL 410
DPFLH L
Sbjct: 468 DPFLHSL 474
>gi|125982768|ref|XP_001355154.1| GA17103 [Drosophila pseudoobscura pseudoobscura]
gi|54643467|gb|EAL32211.1| GA17103 [Drosophila pseudoobscura pseudoobscura]
Length = 590
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 272/427 (63%), Positives = 312/427 (73%), Gaps = 71/427 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LVRDRELY DTDTEVKRQIW+DNQS
Sbjct: 102 LLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILVRDRELYADTDTEVKRQIWRDNQS 161
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTP
Sbjct: 162 LFGDEVSPLLSQYIREKEHILFDHTNLNNLFFHPTP------------------------ 197
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLA+MIG+SVKLYDMVLQFLRT
Sbjct: 198 ----------------------------KVRRQGEVVQKLANMIGTSVKLYDMVLQFLRT 229
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+Q+IIS+DPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 230 LFLRTRNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQ 289
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQVLGDLSMTLCDPYAINFLATSA+KILH+LINNE +PR+N +L+LLLRM
Sbjct: 290 GFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILHHLINNEGMPRDNQILILLLRM 349
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAWVMID+Q ++ + + L MV R+L +
Sbjct: 350 LALGLSAWVMIDSQDFKEPKLDCQVVTKFLPALMSL--MVDDQCRSLHGKLPPDERESAL 407
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDAV+AY+QES+V+ I++MYYTLHTAR +DRVG++RVL +L+ + RA++
Sbjct: 408 TIIEHSGPAPDAVEAYIQESAVSSILAMYYTLHTARLKDRVGVLRVLAILSACKDHRAYE 467
Query: 404 DPFLHFL 410
DPFLH L
Sbjct: 468 DPFLHSL 474
>gi|242006948|ref|XP_002424304.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212507704|gb|EEB11566.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 574
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/434 (64%), Positives = 312/434 (71%), Gaps = 71/434 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSF LVR KQLRPVVM ILRNT HIDDKYL +LVRDRELY DTDTEVKRQIW+DNQS
Sbjct: 91 LLSKSFKLVRFKQLRPVVMCILRNTPHIDDKYLNILVRDRELYSDTDTEVKRQIWRDNQS 150
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYI++KENILFDH NL NLFF
Sbjct: 151 LFGDEVSPLLSQYIQDKENILFDHLNLNNLFF---------------------------- 182
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R EVVQKLAHMIG+SVKLYDMVLQFLRT
Sbjct: 183 ------------------------SSSPKIRRQSEVVQKLAHMIGTSVKLYDMVLQFLRT 218
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREK+VDIKRSRELQ
Sbjct: 219 LFLRTSNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKSVDIKRSRELQ 278
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLDSIKRG EQVLGDLSMTLCDPYAINFLA SA+KIL +LI+NEALPR+NTVL+LLLRM
Sbjct: 279 GFLDSIKRGQEQVLGDLSMTLCDPYAINFLAQSAIKILQHLIHNEALPRDNTVLILLLRM 338
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAW MIDTQ ++ + + L MV +RTL +
Sbjct: 339 LALGLSAWYMIDTQEFKEPKLDCQVVTKFMPALMSL--MVDDQVRTLNSKLPPDERESAI 396
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDA QAYV ESSVA I++MYYT+HTA+ +D+VGLMRVLG+LAT ++DRA++
Sbjct: 397 TIIEHSGPAPDACQAYVTESSVASILAMYYTIHTAKLKDKVGLMRVLGILATCDNDRAYE 456
Query: 404 DPFLHFLSSYEISL 417
DPFLH L S+ I +
Sbjct: 457 DPFLHLLVSHLIHM 470
>gi|195480393|ref|XP_002101246.1| GE17513 [Drosophila yakuba]
gi|194188770|gb|EDX02354.1| GE17513 [Drosophila yakuba]
Length = 595
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 272/430 (63%), Positives = 310/430 (72%), Gaps = 74/430 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LVRDRELY DTDTEVKRQIW+DNQS
Sbjct: 103 LLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILVRDRELYADTDTEVKRQIWRDNQS 162
Query: 61 LFGDEVSPLLSQYIREKENILFDH---HNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALM 117
LFGDEVSPLLSQYIREKE+IL D NL NLFF PTP
Sbjct: 163 LFGDEVSPLLSQYIREKEHILLDPLYTTNLNNLFFPPTP--------------------- 201
Query: 118 SLMVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQF 177
+ R GEVVQK A+MIG+SVKLYDMVLQF
Sbjct: 202 -------------------------------KVRRQGEVVQKGANMIGTSVKLYDMVLQF 230
Query: 178 LRTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSR 237
LRTLFLRT NVHYCTLRAELLMALHDLE+Q+IIS+DPCHKFTWCLDACIREKNVDIKRSR
Sbjct: 231 LRTLFLRTRNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSR 290
Query: 238 ELQGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLL 297
ELQGFLD+IKRG EQVLGDLSMTLCDPYAINFLATSA+KILH+LINNE +PR+N +L+LL
Sbjct: 291 ELQGFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILHHLINNEGMPRDNQILILL 350
Query: 298 LRMLALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR------- 343
LRMLALGLSAWVMID+Q ++ + + L MV R+L +
Sbjct: 351 LRMLALGLSAWVMIDSQDFKEPKLDCQVVTKFLPALMSL--MVDDQCRSLHAKLPPDERE 408
Query: 344 ---THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDR 400
T H P PDAV+AY+QESSVA I++MYYTLHTAR +DRVG++RVL +L+ + DR
Sbjct: 409 SALTTIEHSGPAPDAVEAYIQESSVASILAMYYTLHTARLKDRVGVLRVLAILSACKDDR 468
Query: 401 AFDDPFLHFL 410
A++DPFLH L
Sbjct: 469 AYEDPFLHSL 478
>gi|91078954|ref|XP_974170.1| PREDICTED: similar to CG32721 CG32721-PA [Tribolium castaneum]
gi|270004158|gb|EFA00606.1| hypothetical protein TcasGA2_TC003481 [Tribolium castaneum]
Length = 587
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/425 (62%), Positives = 304/425 (71%), Gaps = 67/425 (15%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+V+VK LRP+VMAIL+NT IDD YL++LVRDRELY DTDTEVKRQIWKDNQS
Sbjct: 100 LLVKSFPVVKVKALRPIVMAILKNTPQIDDNYLKILVRDRELYNDTDTEVKRQIWKDNQS 159
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYI EKEN+LFDH N++ FF P
Sbjct: 160 LFGDEVSPLLSQYISEKENVLFDHTNISTQFFGP-------------------------- 193
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVVQKLAHMIG+SVKLYDMVLQFLRT
Sbjct: 194 --------------------------SPKVRRQGEVVQKLAHMIGNSVKLYDMVLQFLRT 227
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+QDIIS+DPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 228 LFLRTRNVHYCTLRAELLMALHDLEVQDIISIDPCHKFTWCLDACIREKNVDIKRSRELQ 287
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD++KRG EQVLGDLSMTLCDPYAINFLATSA+KILH+LI E +PR+NT+L+LLLRM
Sbjct: 288 GFLDNVKRGQEQVLGDLSMTLCDPYAINFLATSAIKILHHLIYVEGMPRDNTILILLLRM 347
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLY--DMVLQFLRTLFLRTHNV---- 347
LALGLSAWVMID+Q ++ + + L D V Q L
Sbjct: 348 LALGLSAWVMIDSQDFKEPKLDSQVVTKFLPALMSLMVDDQVRQLSGKLPPDEREAAITV 407
Query: 348 --HYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDP 405
H P+PDAV+AY+Q+SSVA I++MYYTL+ AR +DRVGL+RVL VLA + DRAF+DP
Sbjct: 408 IEHSGPLPDAVEAYIQDSSVASILAMYYTLNVARLKDRVGLLRVLTVLANCKDDRAFEDP 467
Query: 406 FLHFL 410
FLH L
Sbjct: 468 FLHSL 472
>gi|357613673|gb|EHJ68645.1| hypothetical protein KGM_17840 [Danaus plexippus]
Length = 588
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/434 (59%), Positives = 308/434 (70%), Gaps = 71/434 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+V+VK LRPV+M+IL+NT HIDDKYLRVLVRDR+LY DTDTEVKRQIW+DNQS
Sbjct: 103 LLNKSFPVVKVKALRPVIMSILKNTPHIDDKYLRVLVRDRDLYNDTDTEVKRQIWQDNQS 162
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKENILFDH NL NLFF P
Sbjct: 163 LFGDEVSPLLSQYIREKENILFDHENLGNLFFSP-------------------------- 196
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R G V+QKLAHM+G+S+KLYDMVLQFLRT
Sbjct: 197 --------------------------SPKVRRQGAVIQKLAHMVGTSIKLYDMVLQFLRT 230
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHD+E+ +IISVDPCHKFTWCLDACIRE+NVDIKRSRELQ
Sbjct: 231 LFLRTRNVHYCTLRAELLMALHDVEVHEIISVDPCHKFTWCLDACIRERNVDIKRSRELQ 290
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD++K+GHEQVLGDLSMTLCDPYA+NFLATSA+KIL +LIN E LPR+NT+L+LLLRM
Sbjct: 291 GFLDNVKKGHEQVLGDLSMTLCDPYAVNFLATSAIKILQHLINTEGLPRDNTILILLLRM 350
Query: 301 LALGLSAWVMIDTQG-------GNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAW +IDTQ ++ + + L MV +R L +
Sbjct: 351 LALGLSAWEIIDTQNFKEPKLDSQVVTKYLPAMMSL--MVDDQVRALHNKLPPDERESAI 408
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDA +AY++ESSV +++MYYTLH A+SRDR+ ++R+L +L + + +A++
Sbjct: 409 TTIEHSGPPPDACEAYMRESSVCGVLAMYYTLHAAKSRDRIAILRILSILGSCKDGKAYE 468
Query: 404 DPFLHFLSSYEISL 417
DPFLH L + I L
Sbjct: 469 DPFLHALVALLIQL 482
>gi|383858421|ref|XP_003704700.1| PREDICTED: negative elongation factor B-like [Megachile rotundata]
Length = 607
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 264/441 (59%), Positives = 288/441 (65%), Gaps = 88/441 (19%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP VRV LRPVVM ILRNT HI+DKYLRVLVR++ELY D DTEVKRQIWKDNQS
Sbjct: 107 LLSKSFPAVRVAALRPVVMCILRNTPHIEDKYLRVLVREKELYNDADTEVKRQIWKDNQS 166
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPL S+YI EKE ILFDH NL +LFF P
Sbjct: 167 LFGDEVSPLFSRYIIEKEQILFDHRNLNSLFFMP-------------------------- 200
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVVQKLAHMIG SVKLYDMVLQFLRT
Sbjct: 201 --------------------------SPKVRRQGEVVQKLAHMIGHSVKLYDMVLQFLRT 234
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT N+HYCTLRAELLMALHDLE+QDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 235 LFLRTKNIHYCTLRAELLMALHDLEVQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 294
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLDSIKRG EQVLGDLSM LCDPYA+NFLA+SA+KI +LIN+EALPREN VLVLLLRM
Sbjct: 295 GFLDSIKRGQEQVLGDLSMILCDPYAVNFLASSAIKIALHLINSEALPRENAVLVLLLRM 354
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLF-------LRTHNV------ 347
LALGLSAW MID+Q F+ +V +FL L +R N
Sbjct: 355 LALGLSAWQMIDSQD-------FKEPKLDSQVVTKFLPALMSLMVDDQIRQLNCKLPPDE 407
Query: 348 ---------HYWPVPDAVQAYVQESSVACIISMYYTLH-------TARSRDRVGLMRVLG 391
H P PDA QAY Q S VA ++SMYY LH D GLMRVL
Sbjct: 408 RESAIAIIEHSGPPPDACQAYAQLSGVAAVLSMYYALHVGGGGGVGRGRGDARGLMRVLA 467
Query: 392 VLATSESDRAFDDPFLHFLSS 412
L ++ RAF+DPFLH L S
Sbjct: 468 TLPNCQAQRAFEDPFLHTLVS 488
>gi|380018067|ref|XP_003692958.1| PREDICTED: negative elongation factor B-like [Apis florea]
Length = 607
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 264/441 (59%), Positives = 287/441 (65%), Gaps = 88/441 (19%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP VRV LRPVVM ILRNT HI+DKYLRVLVR++ELY D DTEVKRQIWKDNQS
Sbjct: 107 LLSKSFPAVRVTALRPVVMCILRNTPHIEDKYLRVLVREKELYNDADTEVKRQIWKDNQS 166
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPL S+YI EKE ILFDH NL +LFF P
Sbjct: 167 LFGDEVSPLFSRYIIEKEQILFDHRNLNSLFFMP-------------------------- 200
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVVQKLAHMIG SVKLYDMVLQFLRT
Sbjct: 201 --------------------------SPKVRRQGEVVQKLAHMIGHSVKLYDMVLQFLRT 234
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT N+HYCTLRAELLMALHDLE+QDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 235 LFLRTKNIHYCTLRAELLMALHDLEVQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 294
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLDSIKRG EQVLGDLSM LCDPYA+NFLA+SA+KI +LIN EALPREN VLVLLLRM
Sbjct: 295 GFLDSIKRGQEQVLGDLSMILCDPYAVNFLASSAIKIALHLINGEALPRENAVLVLLLRM 354
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLF-------LRTHNV------ 347
LALGLSAW MID+Q F+ +V +FL L +R N
Sbjct: 355 LALGLSAWQMIDSQD-------FKEPKLDSQVVTKFLPALMSLMVDDQIRQLNCKLPPDE 407
Query: 348 ---------HYWPVPDAVQAYVQESSVACIISMYYTLH-------TARSRDRVGLMRVLG 391
H P PDA QAY Q S VA ++SMYY LH D GLMRVL
Sbjct: 408 RESAIAIIEHSGPPPDACQAYAQLSGVAAVLSMYYALHVGGGGGVGKGRGDARGLMRVLA 467
Query: 392 VLATSESDRAFDDPFLHFLSS 412
L ++ RAF+DPFLH L S
Sbjct: 468 TLPNCQAQRAFEDPFLHTLVS 488
>gi|307212551|gb|EFN88274.1| Negative elongation factor B [Harpegnathos saltator]
Length = 607
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 257/436 (58%), Positives = 291/436 (66%), Gaps = 78/436 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP VRV QLRPVVMAILRNT HI++KYLRVLV+++ELY D DTEVKRQIWKDNQS
Sbjct: 107 LLSKSFPAVRVAQLRPVVMAILRNTPHIEEKYLRVLVKEKELYNDADTEVKRQIWKDNQS 166
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPL S+YI EKE ILFDH NL +LFF P
Sbjct: 167 LFGDEVSPLFSRYIIEKEQILFDHRNLNSLFFTP-------------------------- 200
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVVQKLAHMIG SVKLYDMVLQFLRT
Sbjct: 201 --------------------------SPKVRRQGEVVQKLAHMIGHSVKLYDMVLQFLRT 234
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT N++YCTLRAELLMALHDLE+Q+IISVDPCHKFTWCLDACIREKNVD+KRSRELQ
Sbjct: 235 LFLRTKNINYCTLRAELLMALHDLEVQEIISVDPCHKFTWCLDACIREKNVDVKRSRELQ 294
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLDSIKRG EQVLGDLSM LCDPYA+NFLA+S +KI +LIN+E+LPR+N VL+LLLRM
Sbjct: 295 GFLDSIKRGQEQVLGDLSMILCDPYAVNFLASSVIKIALHLINSESLPRDNAVLLLLLRM 354
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLRTHN------- 346
LALGLSAW MIDTQ G ++ + + L MV +R L R
Sbjct: 355 LALGLSAWQMIDTQVFKEPKLDGQVVTKFLPALMSL--MVDDQIRQLNCRLPPDERESAI 412
Query: 347 ---VHYWPVPDAVQAYVQESSVACIISMYYTLH-------TARSRDRVGLMRVLGVLATS 396
H P PDA Q YVQ S VA ++SMYY+LH D GL RVL +L
Sbjct: 413 AIIEHAGPTPDACQTYVQLSGVAAVLSMYYSLHVGGGGGVVKGRGDTRGLTRVLPILPNC 472
Query: 397 ESDRAFDDPFLHFLSS 412
++ RAF+DPFLH L S
Sbjct: 473 QAHRAFEDPFLHTLVS 488
>gi|350406456|ref|XP_003487776.1| PREDICTED: negative elongation factor B-like [Bombus impatiens]
Length = 603
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 264/441 (59%), Positives = 287/441 (65%), Gaps = 88/441 (19%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP VRV LRPVVM ILRNT HI+DKYLRVLVR++ELY D DTEVKRQIWKDNQS
Sbjct: 107 LLSKSFPAVRVAALRPVVMCILRNTPHIEDKYLRVLVREKELYNDADTEVKRQIWKDNQS 166
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPL S+YI EKE ILFDH NL +LFF P
Sbjct: 167 LFGDEVSPLFSRYIIEKEQILFDHRNLNSLFFMP-------------------------- 200
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVVQKLAHMIG SVKLYDMVLQFLRT
Sbjct: 201 --------------------------SPKVRRQGEVVQKLAHMIGHSVKLYDMVLQFLRT 234
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT N+HYCTLRAELLMALHDLE+QDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 235 LFLRTKNIHYCTLRAELLMALHDLEVQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 294
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLDSIKRG EQVLGDLSM LCDPYA+NFLA+SA+KI +LIN EALPREN VLVLLLRM
Sbjct: 295 GFLDSIKRGQEQVLGDLSMILCDPYAVNFLASSAIKIALHLINGEALPRENAVLVLLLRM 354
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLF-------LRTHNV------ 347
LALGLSAW MID+Q F+ +V +FL L +R N
Sbjct: 355 LALGLSAWQMIDSQD-------FKEPKLDSQVVTKFLPALMSLMVDDQIRQLNCKLPPDE 407
Query: 348 ---------HYWPVPDAVQAYVQESSVACIISMYYTLHT-------ARSRDRVGLMRVLG 391
H P PDA QAY Q S VA ++SMYY LH D GLMRVL
Sbjct: 408 RESAIAIIEHSGPPPDACQAYAQLSGVAAVLSMYYALHVGGGGGIGRGRGDARGLMRVLA 467
Query: 392 VLATSESDRAFDDPFLHFLSS 412
L ++ RAF+DPFLH L S
Sbjct: 468 TLPNCQAQRAFEDPFLHTLVS 488
>gi|340716282|ref|XP_003396628.1| PREDICTED: negative elongation factor B-like [Bombus terrestris]
Length = 603
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 264/441 (59%), Positives = 287/441 (65%), Gaps = 88/441 (19%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP VRV LRPVVM ILRNT HI+DKYLRVLVR++ELY D DTEVKRQIWKDNQS
Sbjct: 107 LLSKSFPAVRVAALRPVVMCILRNTPHIEDKYLRVLVREKELYNDADTEVKRQIWKDNQS 166
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPL S+YI EKE ILFDH NL +LFF P
Sbjct: 167 LFGDEVSPLFSRYIIEKEQILFDHRNLNSLFFMP-------------------------- 200
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVVQKLAHMIG SVKLYDMVLQFLRT
Sbjct: 201 --------------------------SPKVRRQGEVVQKLAHMIGHSVKLYDMVLQFLRT 234
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT N+HYCTLRAELLMALHDLE+QDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 235 LFLRTKNIHYCTLRAELLMALHDLEVQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 294
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLDSIKRG EQVLGDLSM LCDPYA+NFLA+SA+KI +LIN EALPREN VLVLLLRM
Sbjct: 295 GFLDSIKRGQEQVLGDLSMILCDPYAVNFLASSAIKIALHLINGEALPRENAVLVLLLRM 354
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLF-------LRTHNV------ 347
LALGLSAW MID+Q F+ +V +FL L +R N
Sbjct: 355 LALGLSAWQMIDSQD-------FKEPKLDSQVVTKFLPALMSLMVDDQIRQLNCKLPPDE 407
Query: 348 ---------HYWPVPDAVQAYVQESSVACIISMYYTLHT-------ARSRDRVGLMRVLG 391
H P PDA QAY Q S VA ++SMYY LH D GLMRVL
Sbjct: 408 RESAIAIIEHSGPPPDACQAYAQLSGVAAVLSMYYALHVGGGGGIGRGRGDARGLMRVLA 467
Query: 392 VLATSESDRAFDDPFLHFLSS 412
L ++ RAF+DPFLH L S
Sbjct: 468 TLPNCQAQRAFEDPFLHTLVS 488
>gi|312373959|gb|EFR21621.1| hypothetical protein AND_16703 [Anopheles darlingi]
Length = 561
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/427 (59%), Positives = 289/427 (67%), Gaps = 98/427 (22%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVKQLRPVVM ILRNT HIDDKYLR+LVRDRELY+DTDTEVKRQIW+DNQS
Sbjct: 102 LLVKSFPVVRVKQLRPVVMCILRNTPHIDDKYLRILVRDRELYQDTDTEVKRQIWRDNQS 161
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NLTNLFF PTP
Sbjct: 162 LFGDEVSPLLSQYIREKEHILFDHLNLTNLFFTPTP------------------------ 197
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ R GEVVQKLAHMIG+SVKLYDMVLQFLRT
Sbjct: 198 ----------------------------KVRRQGEVVQKLAHMIGNSVKLYDMVLQFLRT 229
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHDLE+QDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ
Sbjct: 230 LFLRTRNVHYCTLRAELLMALHDLEVQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 289
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD+IKRG EQ +LINNE L RENT+L+LLLRM
Sbjct: 290 GFLDNIKRGQEQ---------------------------HLINNEGLSRENTILILLLRM 322
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGLSAW+MID+Q ++ + + L MV +R L +
Sbjct: 323 LALGLSAWIMIDSQDFKEPKLDSQVVTKFLPALMSL--MVDDQVRNLHSKLPPDERESAI 380
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDAV+AY+QES+VA I++MYYTLHTAR +DRVG++RV+ +L++ + DRA++
Sbjct: 381 TTIEHSGPAPDAVEAYIQESAVASILAMYYTLHTARQKDRVGILRVMAILSSCKDDRAYE 440
Query: 404 DPFLHFL 410
DPFLH L
Sbjct: 441 DPFLHSL 447
>gi|321477825|gb|EFX88783.1| hypothetical protein DAPPUDRAFT_206529 [Daphnia pulex]
Length = 607
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/435 (55%), Positives = 295/435 (67%), Gaps = 81/435 (18%)
Query: 5 SFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGD 64
SF +V+ K LRPVVMA++++ +H+D+KYL+VLV+D+ELY D DT VKRQ+WKDNQSLFGD
Sbjct: 126 SFLVVKTKALRPVVMAVMKHLSHVDEKYLKVLVKDKELYDDCDTVVKRQMWKDNQSLFGD 185
Query: 65 EVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLMVDDQ 124
EVSPLLSQYI+EKE +LFD +NLTNLFF P+PK
Sbjct: 186 EVSPLLSQYIKEKEQLLFDQNNLTNLFFLPSPK--------------------------- 218
Query: 125 VRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTLFLR 184
R GEVVQKLAHMIG++V+LYDMVLQFLRTLFLR
Sbjct: 219 -------------------------VRRQGEVVQKLAHMIGNNVRLYDMVLQFLRTLFLR 253
Query: 185 THNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLD 244
T NVHYCTLRAELLMALH+ E+Q+I +VDPCHKFTWC+DACIRE+NVD KRSRE+Q FLD
Sbjct: 254 TRNVHYCTLRAELLMALHETEVQEITNVDPCHKFTWCVDACIRERNVDTKRSREIQAFLD 313
Query: 245 SIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALG 304
IK G EQVLGDLSM LCDPYA++FLATS++KILH L+ +E+LPRE+ +L+LLLRMLALG
Sbjct: 314 GIKSGQEQVLGDLSMMLCDPYAVHFLATSSLKILHNLVASESLPREHHILLLLLRMLALG 373
Query: 305 LSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLF-------LRTHNV---------- 347
LSAW MID+Q FR +V +FL L +R+ N
Sbjct: 374 LSAWQMIDSQE-------FREPRLDSQVVTKFLPALMSLMVDDQVRSLNSKLPSDERESA 426
Query: 348 -----HYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAF 402
H P PDA QAY+ ESSV C+++MYYTL ARSRD+V L RVLG LA +R+F
Sbjct: 427 LTIIEHSGPPPDAFQAYISESSVPCVLAMYYTLQVARSRDKVALTRVLGTLAVGHGERSF 486
Query: 403 DDPFLHFLSSYEISL 417
+DPFLH L ++ I +
Sbjct: 487 EDPFLHTLVAHLIPM 501
>gi|427784535|gb|JAA57719.1| Putative negative elongation factor b culex quinquefasciatus
negative elongation factor b [Rhipicephalus pulchellus]
Length = 600
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/430 (55%), Positives = 285/430 (66%), Gaps = 62/430 (14%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
ML+KSFP+++V LRPVVM IL+N H+++KYL+ LV D+ LYK+ D +VKRQIW+++QS
Sbjct: 94 MLQKSFPVIKVPALRPVVMCILKNMEHVEEKYLKQLVSDKTLYKECDVQVKRQIWQEHQS 153
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEV PLLSQYIREKE AL SL
Sbjct: 154 LFGDEVLPLLSQYIREKEE-----------------------------------ALWSLA 178
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S+ A + S + R G V+Q+L M+G +V LYDMVLQF+RT
Sbjct: 179 PQTAAGGATSE--------ASSFFGPSPKQRRQGAVLQRLLVMVGRNVVLYDMVLQFVRT 230
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLR ELLMALHDLEIQDI +VDPCHKF+WCLDACIREKNVD KRSRELQ
Sbjct: 231 LFLRTRNVHYCTLRVELLMALHDLEIQDITAVDPCHKFSWCLDACIREKNVDTKRSRELQ 290
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLDSIKRG EQVLGDLSMTLCDPYAINFLA SA+KI+++LIN E LPR+N VLVLLLRM
Sbjct: 291 GFLDSIKRGQEQVLGDLSMTLCDPYAINFLAQSALKIINHLINIEGLPRDNQVLVLLLRM 350
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
LALGL AW MI TQ ++ + + L MV +R+L R
Sbjct: 351 LALGLQAWEMISTQQYKEPKLDVQLITKFLPALMSL--MVDDQVRSLSSRLPQDDRESAI 408
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDA QAYVQE++VA ++++YYT HTAR RDR G+MRVLG LA +E RA+
Sbjct: 409 TTIEHSGPPPDAYQAYVQENAVASVLALYYTFHTARQRDRTGVMRVLGSLAGAEGQRAYQ 468
Query: 404 DPFLHFLSSY 413
DPFLH L +
Sbjct: 469 DPFLHTLVGH 478
>gi|405959404|gb|EKC25449.1| Negative elongation factor B [Crassostrea gigas]
Length = 568
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/432 (46%), Positives = 267/432 (61%), Gaps = 74/432 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSFP+++VK LRPVVMAIL++ I D+YL ++ D+ELY + TEVKRQIW DNQ+
Sbjct: 94 LLEKSFPVIKVKSLRPVVMAILKHLPQIKDEYLEKILDDKELYAEAATEVKRQIWSDNQA 153
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYI+EKEN LF H N
Sbjct: 154 LFGDEVSPLLSQYIKEKENSLFSHEN---------------------------------- 179
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
SA T S + R EVVQ+LA M+G +VKLYDMVLQFLRT
Sbjct: 180 ------------------SAQTFYLASPKLRRQSEVVQRLADMVGKNVKLYDMVLQFLRT 221
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT N+HYCTLRAELLMALHD E+ DI S+DPCHKFTWC+DACIR+K +D KRSRELQ
Sbjct: 222 LFLRTRNMHYCTLRAELLMALHDQEVNDICSIDPCHKFTWCVDACIRDKFIDSKRSRELQ 281
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD I+RG E VLGDLSM LCDP+++N + S M+ L + +NNE+LPR+++ +VLL+RM
Sbjct: 282 GFLDGIRRGQEFVLGDLSMVLCDPFSMNTVGLSMMRNLQHCLNNESLPRDSSEIVLLVRM 341
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSC---FKLYDMVLQFLRTLFLRTHN----------- 346
+ LGL +W MID+Q +FR L+ L + +L + H
Sbjct: 342 MGLGLGSWDMIDSQ-------LFREPKLESSLFTKFLPMISSLMVEDHTRVLSAKLPEEP 394
Query: 347 -VHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDP 405
+ P D +V+E+ +A ++YY+L R +DRV ++ VL E++RA++D
Sbjct: 395 PLSATPPSDLFLTFVKENPIASFTTLYYSLQVTRMKDRVAACNIIPVLVHCENERAYEDT 454
Query: 406 FLHFLSSYEISL 417
FLH L S+ I++
Sbjct: 455 FLHSLISFLIAM 466
>gi|391334290|ref|XP_003741538.1| PREDICTED: negative elongation factor B-like [Metaseiulus
occidentalis]
Length = 574
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 208/464 (44%), Positives = 284/464 (61%), Gaps = 78/464 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L++SFP+V+V LRP+VMAIL+N H+D+++L+ LV D++LY++ D VKRQIW +QS
Sbjct: 91 LLQRSFPVVKVDALRPIVMAILKNLEHVDERFLKQLVTDKQLYQEADVGVKRQIWLYHQS 150
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFG+E+ PL QY+ E+E ++D T F+ PTPK+ ++ + Q+VT
Sbjct: 151 LFGEELGPLFEQYMAEREAAVWDLAEGTASFYGPTPKQRRQQPIVQQLVT---------- 200
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
M+G +V LYDMVLQFLRT
Sbjct: 201 ------------------------------------------MVGRNVVLYDMVLQFLRT 218
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LF++T +VHYCTLR ELLMALHD +IQDI +D CHKF WCLDAC+RE+ +D KRS+ELQ
Sbjct: 219 LFIKTKSVHYCTLRVELLMALHDGDIQDITQIDSCHKFAWCLDACVRERTIDGKRSKELQ 278
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD +K G+EQVLGD++MTL DP+A NFL TSA+KI+ +LINNE LPR++ +L+LLLR+
Sbjct: 279 GFLDGVKPGNEQVLGDIAMTLADPHATNFLVTSALKIIQHLINNENLPRDHPILILLLRL 338
Query: 301 LALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLR---------- 343
L+LGL A M++ ++ + S L +V +R+L +
Sbjct: 339 LSLGLDALRMMEKSDFKEPKLDPQVVTKFLPSMMSL--IVDDLVRSLNSKLPKDDRETAI 396
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T H P PDA QAYV ES VACI++ YYTLHT +SRDR GLMRVLGVL S A+
Sbjct: 397 TTIEHLGPPPDAYQAYVNESGVACILASYYTLHTVKSRDRTGLMRVLGVL--SGEAYAYS 454
Query: 404 DPFLH----FLSSYEISLWTSLNWQRVWLRHYFQTSPKRNFNVL 443
D FLH +L +Y + ++ ++ V +F T+ R NVL
Sbjct: 455 DVFLHTLVGYLVTYMLEEFSHEDFCTVIFDEFFLTALARE-NVL 497
>gi|291230864|ref|XP_002735387.1| PREDICTED: cofactor of BRCA1-like [Saccoglossus kowalevskii]
Length = 537
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 202/420 (48%), Positives = 269/420 (64%), Gaps = 61/420 (14%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSFPL+R+ +RPVVM +++ + +KYL+VLV DRELY++ EVKRQIW+DNQS
Sbjct: 94 LLEKSFPLIRIAAVRPVVMTLMKYMPEVPEKYLQVLVEDRELYEEAAVEVKRQIWQDNQS 153
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLS+YI+ KE LF +F+ +P PKL Q
Sbjct: 154 LFGDEVSPLLSEYIKLKEKQLFGVEAGVQ-YFYASP-----PKLRRQ------------- 194
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
G VV KL M+G ++KLYDMVLQFLRT
Sbjct: 195 ---------------------------------GSVVVKLTEMVGKNIKLYDMVLQFLRT 221
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT N+HYCTLRAELLM+LHDLE+ +I S+DPCHKFTWCLDACIRE+ VD KRSRELQ
Sbjct: 222 LFLRTRNIHYCTLRAELLMSLHDLEVHEICSIDPCHKFTWCLDACIRERFVDEKRSRELQ 281
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFL+ +K+G EQVLGDLSM LCDP+AI+ LATS++KIL+ L + E+LPR+++ L+LLLRM
Sbjct: 282 GFLNGVKKGQEQVLGDLSMILCDPFAIHTLATSSIKILNQLASTESLPRDSSELILLLRM 341
Query: 301 LALGLSAWVMIDTQG------GNILIEIFRSCFK--LYDMVLQFLRTLFLRTHNVHYWPV 352
L LGL AW MI++Q N LI + C + D Q +R + N+ +
Sbjct: 342 LTLGLGAWTMINSQTFRESKLDNDLILKYLPCVLGFIVDDHTQAIRKRLGESENLKSL-L 400
Query: 353 PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSS 412
PD Y+++ VA +++YY ++ A+ ++R+ + R+L L ES+R+F+D FLH L S
Sbjct: 401 PDTYLKYLKKDHVAFTLAIYYIMNVAKQKNRIAVSRLLPSLLKGESERSFEDTFLHPLLS 460
>gi|449477837|ref|XP_004177005.1| PREDICTED: LOW QUALITY PROTEIN: negative elongation factor B-like
[Taeniopygia guttata]
Length = 714
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 201/431 (46%), Positives = 260/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ ++PVVM ++++ + +K L++++ D++LYK EVKRQIW+DNQ+
Sbjct: 233 LLEKSFSLVKMPSIQPVVMCVMKHLPKVPEKKLKLVMADKDLYKACAVEVKRQIWQDNQA 292
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKENILF + + FF P
Sbjct: 293 LFGDEVSPLLKQYILEKENILFSNDISFLQNFFSP------------------------- 327
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL MIG +VKLYDMVLQFLR
Sbjct: 328 ---------------------------SPKTRRQGEVVQKLTQMIGKNVKLYDMVLQFLR 360
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDLEI DI +VDPCHKFTWCLDACIREK VD KR+REL
Sbjct: 361 TLFLRTRNVHYCTLRAELLMSLHDLEISDICTVDPCHKFTWCLDACIREKFVDNKRAREL 420
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QG LD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ + LPRE+ L+LLLR
Sbjct: 421 QGXLDGVKKGQEQVLGDLSMILCDPFAINTLALSTIRHLQDLVGQDTLPRESPDLLLLLR 480
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPV------- 352
ML+LG AW MID+Q +F+ +++ +FL L + H + V
Sbjct: 481 MLSLGQGAWDMIDSQ-------VFKEPKMEVELITRFLPLLMSFVVDDHTFTVDQKLPSE 533
Query: 353 -----------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
P+A ++QE+ +AC I +YY LH + R++ +R+L L + SD A
Sbjct: 534 EKGPIPYPSTIPEAFTKFLQENRIACEIGLYYILHITKQRNKNAFLRLLPALVETFSDLA 593
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 594 FSDIFLHLLTG 604
>gi|260828669|ref|XP_002609285.1| hypothetical protein BRAFLDRAFT_124742 [Branchiostoma floridae]
gi|229294641|gb|EEN65295.1| hypothetical protein BRAFLDRAFT_124742 [Branchiostoma floridae]
Length = 585
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 197/431 (45%), Positives = 265/431 (61%), Gaps = 73/431 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
ML+K F ++ LRPVVM ++++ +I + YL+ L+ D LYK++ TEVKRQIW++NQS
Sbjct: 112 MLEKCFLTIKNPTLRPVVMHVMKHINNIPEDYLKKLLEDPNLYKESATEVKRQIWRNNQS 171
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNL-TNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLLSQYI+EK+ +LF +N FF P PK
Sbjct: 172 LFGDEVSPLLSQYIKEKDTLLFSLEPANSNNFFTPAPKS--------------------- 210
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
R GEVVQKL HMIG VKLYDMVLQFLR
Sbjct: 211 -------------------------------RRQGEVVQKLMHMIGRDVKLYDMVLQFLR 239
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLMALHD E+ +I SVDPCHKFTWCLDACIRE+ +D KR+REL
Sbjct: 240 TLFLRTRNVHYCTLRAELLMALHDTEVHEICSVDPCHKFTWCLDACIRERFIDAKRAREL 299
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +KRG EQVLGDLSM LCDPYA+N +A+S++K+L +L+ E+LPR++ L LLLR
Sbjct: 300 QGFLDGVKRGQEQVLGDLSMILCDPYAVNTVASSSLKVLQHLVAQESLPRDSPELSLLLR 359
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLF-------LR------THN 346
ML+LGL AW MID+Q +F+ +++ +FL L +R + N
Sbjct: 360 MLSLGLGAWEMIDSQ-------VFKEPKPDNEVITKFLPALMGLMVEDQVRLVAKKLSEN 412
Query: 347 VHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPF 406
+P +++ +A I+++YY + + R++ +M ++ + + +D + +DPF
Sbjct: 413 HKNSTIPKTFAKSIRQHGIAAILTLYYLYNVTKHRNKDAIMHIIPKMTDTHNDLSLEDPF 472
Query: 407 LHFLSSYEISL 417
+H L S IS+
Sbjct: 473 VHLLVSLLISM 483
>gi|58332746|ref|NP_001011448.1| negative elongation factor complex member B [Xenopus (Silurana)
tropicalis]
gi|56970601|gb|AAH88538.1| hypothetical LOC496936 [Xenopus (Silurana) tropicalis]
Length = 576
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 262/430 (60%), Gaps = 76/430 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+K F LV++ ++PVVM ++++ + +K L++++ D++LYK EVKRQIW+DNQ+
Sbjct: 96 LLEKCFALVKMPSIQPVVMCVMKHLPKVPEKKLKLVMADKDLYKACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLL QYI EKEN+L D V+ F
Sbjct: 156 LFGDEVSPLLKQYILEKENVLLSS--------------------DLSVLHNF-------- 187
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVVQKL MIG +VKLYDMVLQFLRT
Sbjct: 188 -----------------------FSQSPKTRRQGEVVQKLTQMIGKNVKLYDMVLQFLRT 224
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLM+LHDL+I +I +VDPCHKFTWCLDACIREK VD KR+RELQ
Sbjct: 225 LFLRTRNVHYCTLRAELLMSLHDLDISEICTVDPCHKFTWCLDACIREKFVDAKRARELQ 284
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L LI+ E+LPR+N L+LLLRM
Sbjct: 285 GFLDGVKKGQEQVLGDLSMILCDPFAINTLAVSTIRNLQELISQESLPRDNQELLLLLRM 344
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNVH------- 348
L+LG AW MID+Q +F+ +++ +FL L T+NV
Sbjct: 345 LSLGHGAWDMIDSQ-------VFKEPKLDTELITKFLPLLIGLVVDDYTYNVESKLPTEE 397
Query: 349 ----YWP--VPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAF 402
+P +PD ++QE+ +AC + +YYTLH + R++ L+R+L L D AF
Sbjct: 398 KVPVTYPNTLPDVFTKFLQENRIACEVGLYYTLHITKQRNKNFLLRLLPALKEMTGDTAF 457
Query: 403 DDPFLHFLSS 412
D FLH +S
Sbjct: 458 TDIFLHLFTS 467
>gi|344308170|ref|XP_003422751.1| PREDICTED: negative elongation factor B, partial [Loxodonta
africana]
Length = 863
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 199/431 (46%), Positives = 262/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 62 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 121
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE LF ++ + FF P+P
Sbjct: 122 LFGDEVSPLLKQYILEKEAALFSTELSVLHNFFSPSP----------------------- 158
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
+ R GEVVQKL M+G VKLYDMVLQFLR
Sbjct: 159 -----------------------------KTRRQGEVVQKLTQMVGKKVKLYDMVLQFLR 189
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ DI +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 190 TLFLRTRNVHYCTLRAELLMSLHDLDVSDICTVDPCHKFTWCLDACIRERFVDSKRAREL 249
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR
Sbjct: 250 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTIRHLQELVGQEMLPRDSPDLLLLLR 309
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNV------- 347
+L+LG AW MID+Q +F+ +++ +FL TL T NV
Sbjct: 310 LLSLGQGAWDMIDSQ-------VFKEPKMEVELITRFLPTLMSFVVDDHTFNVDQKLPAE 362
Query: 348 HYWPV------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
PV P++ ++QE +AC + +YY LH A+ R++ L+R+L L + D A
Sbjct: 363 EKAPVTYPNTLPESFTKFLQEQRMACEVGLYYVLHIAKQRNKSALLRLLPGLVETFGDLA 422
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 423 FSDIFLHLLTG 433
>gi|417411803|gb|JAA52327.1| Putative negative elongation factor b, partial [Desmodus rotundus]
Length = 590
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 199/431 (46%), Positives = 261/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 106 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 165
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 166 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 200
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S R R GEVVQKL M+G +VKLYDMVLQFLR
Sbjct: 201 ---------------------------SPRTRRQGEVVQKLTRMVGKNVKLYDMVLQFLR 233
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM LHDL++ DI SVDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 234 TLFLRTRNVHYCTLRAELLMCLHDLDVGDICSVDPCHKFTWCLDACIRERFVDSKRAREL 293
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPR++ L+LLLR
Sbjct: 294 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTVRHLQELVGQETLPRDSPDLLLLLR 353
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPV------- 352
+LALG AW MID+Q +F+ ++V +FL L + H + V
Sbjct: 354 LLALGQGAWDMIDSQ-------VFKEPKMEAELVTRFLPMLMSFVVDDHAFNVDQKLPAE 406
Query: 353 -----------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
P++ ++QE +AC + +YY LH A+ R++ L+R+L LA + D A
Sbjct: 407 ERGPATYPNTLPESFTKFLQEQRMACEVGLYYVLHVAKQRNKNALLRLLPGLAEAFGDLA 466
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 467 FGDIFLHLLTG 477
>gi|311246906|ref|XP_003122390.1| PREDICTED: negative elongation factor B [Sus scrofa]
Length = 580
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 199/431 (46%), Positives = 261/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKEN LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYIVEKENALFSPELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQKLTRMVGRNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ DI SVDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLDVGDICSVDPCHKFTWCLDACIRERFVDGKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPRE+ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTVRHLQELVGQEMLPRESPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPV------- 352
+LALG AW MID+Q +F+ ++V +FL TL + H + V
Sbjct: 344 LLALGQGAWDMIDSQ-------VFKEPKMEVELVTRFLPTLMSFVVDDHTFNVDQKLPAE 396
Query: 353 -----------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 397 EKAPVTYPSTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 456
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 457 FSDIFLHLLTG 467
>gi|147901546|ref|NP_001089871.1| negative elongation factor complex member B [Xenopus laevis]
gi|80477195|gb|AAI08579.1| MGC131073 protein [Xenopus laevis]
Length = 577
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 261/430 (60%), Gaps = 76/430 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+K F LV++ ++PVVM ++++ + +K L++++ D++LYK EVKRQIW+DNQ+
Sbjct: 96 LLEKCFALVKMPSIQPVVMCVMKHLPKVPEKKLKLVMGDKDLYKACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLL QYI EKEN+L D V+ F
Sbjct: 156 LFGDEVSPLLKQYILEKENVLLSS--------------------DLSVLHNF-------- 187
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVVQKL MIG +VKLYDMVLQFLRT
Sbjct: 188 -----------------------FSQSPKTRRQGEVVQKLTQMIGKNVKLYDMVLQFLRT 224
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLM+LHDL+I +I +VDPCHKFTWCLDACIREK VD KR+RELQ
Sbjct: 225 LFLRTRNVHYCTLRAELLMSLHDLDISEICTVDPCHKFTWCLDACIREKFVDAKRARELQ 284
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L LI+ E+LPR+N L+LLLRM
Sbjct: 285 GFLDGVKKGQEQVLGDLSMILCDPFAINTLAMSTIRNLQELISQESLPRDNQELLLLLRM 344
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNVH------- 348
L+LG AW MID+Q +F+ +++ +FL L T NV
Sbjct: 345 LSLGHGAWDMIDSQ-------VFKEPRLDTELITKFLPLLIGLVVDDYTFNVESKLPTEE 397
Query: 349 ----YWP--VPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAF 402
+P +PD ++QE+ +AC + +YYTLH + R++ L+R+L L D AF
Sbjct: 398 KVPVTYPNTLPDVFTKFLQENRLACEVGLYYTLHITKQRNKNFLLRLLPALKEMSGDTAF 457
Query: 403 DDPFLHFLSS 412
D FLH +S
Sbjct: 458 TDIFLHLFTS 467
>gi|327287348|ref|XP_003228391.1| PREDICTED: negative elongation factor B-like [Anolis carolinensis]
Length = 577
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 202/430 (46%), Positives = 260/430 (60%), Gaps = 76/430 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSFPLV++ ++PVVM ++++ + +K L++++ D++LYK EVKRQIW+DNQ+
Sbjct: 96 LLEKSFPLVKMPSIQPVVMCVMKHLPKVPEKKLKLVMADKDLYKACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLL QYI EKE LF +L+ L F +P
Sbjct: 156 LFGDEVSPLLKQYILEKETALFSC-DLSVLHNFFSP------------------------ 190
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVVQKL MIG +VKLYDMVLQFLRT
Sbjct: 191 --------------------------SPKTRRQGEVVQKLTQMIGKNVKLYDMVLQFLRT 224
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLM+LHDLEI +I +VDPCHKFTWCLDACIREK VD KR+RELQ
Sbjct: 225 LFLRTRNVHYCTLRAELLMSLHDLEISEICTVDPCHKFTWCLDACIREKFVDNKRARELQ 284
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ + LPRE+ L+LLLRM
Sbjct: 285 GFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTIRHLQELVGQDMLPRESPDLLLLLRM 344
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLF--------------LRTHN 346
L+LG AW MID+Q IF+ D++ +FL L L +
Sbjct: 345 LSLGQGAWDMIDSQ-------IFKEPKMEVDLITKFLPLLMSFVVDDYTFTVDQRLPSEE 397
Query: 347 VHYWPVPDAV----QAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAF 402
P P A+ ++QE +AC I +YY LH + R++ +R+L L + +D AF
Sbjct: 398 KGPAPYPTAIPEMFPKFLQEHRIACEIGLYYVLHITKLRNKNAFLRLLPSLVETFNDLAF 457
Query: 403 DDPFLHFLSS 412
D FLH L+
Sbjct: 458 GDIFLHLLTG 467
>gi|57525238|ref|NP_001006202.1| negative elongation factor B [Gallus gallus]
gi|53129399|emb|CAG31384.1| hypothetical protein RCJMB04_5l5 [Gallus gallus]
Length = 577
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 200/425 (47%), Positives = 261/425 (61%), Gaps = 78/425 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ ++PVVM ++++ + +K L++++ D++LYK EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSIQPVVMCVMKHLPKVPEKKLKLVMADKDLYKACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKENILF + ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKENILFSNDISVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL MIG +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKARRQGEVVQKLTQMIGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDLEI +I +VDPCHKFTWCLDACIREK VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLEISEICTVDPCHKFTWCLDACIREKFVDNKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ + LPRE+ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTIRHLQDLVGQDTLPRESPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNVHY----- 349
ML+LG AW MID+Q +F+ +++ +FL L T NV
Sbjct: 344 MLSLGQGAWDMIDSQ-------VFKEPKMEAELITKFLPMLMSFVVDDHTFNVDQKLPSE 396
Query: 350 ------WP--VPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
+P +P+A ++QE+ +AC I +YY LH + R++ +R+L L + SD A
Sbjct: 397 EKGPIPYPSTIPEAFTKFLQENRIACEIGLYYILHITKQRNKNAFLRLLPALVETFSDLA 456
Query: 402 FDDPF 406
F D F
Sbjct: 457 FSDIF 461
>gi|296481987|tpg|DAA24102.1| TPA: cofactor of BRCA1 [Bos taurus]
Length = 799
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/431 (46%), Positives = 262/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 315 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 374
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P+PK
Sbjct: 375 LFGDEVSPLLKQYIVEKESALFSTELSVLHNFFSPSPKT--------------------- 413
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 414 -------------------------------RRQGEVVQRLTRMVGRNVKLYDMVLQFLR 442
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ DI SVDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 443 TLFLRTRNVHYCTLRAELLMSLHDLDVGDICSVDPCHKFTWCLDACIRERFVDSKRAREL 502
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPR++ L+LLLR
Sbjct: 503 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTVRHLQELVGQEVLPRDSPDLLLLLR 562
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNV------- 347
+LALG AW MID+Q +F+ ++V +FL L T NV
Sbjct: 563 LLALGQGAWDMIDSQ-------VFKEPKMEVELVTRFLPMLMSFVVDDHTFNVDQKLPAE 615
Query: 348 HYWPV------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
PV P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 616 EKAPVTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 675
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 676 FGDIFLHLLTG 686
>gi|443688985|gb|ELT91507.1| hypothetical protein CAPTEDRAFT_172048 [Capitella teleta]
Length = 569
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 254/421 (60%), Gaps = 61/421 (14%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+V VK LRPVV+ I+++ I +YL V+V ++ELYK++ EVK+QIW+DNQ+
Sbjct: 94 LLTKSFPVVNVKSLRPVVLCIMQHLPKIKQEYLSVIVENKELYKESSVEVKQQIWQDNQA 153
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLS+YI ++EN+LF+H FF
Sbjct: 154 LFGDEVSPLLSKYIDDRENLLFNHQTDQPAFF---------------------------- 185
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ S + R +VVQ+L M+G ++KLYDMVLQFLRT
Sbjct: 186 ------------------------QSSSKTRRQDKVVQQLTKMVGKNIKLYDMVLQFLRT 221
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLMALHD + +I+++DPCHKF WCLDACIREKN+D KR +ELQ
Sbjct: 222 LFLRTRNVHYCTLRAELLMALHDADAHEIVNLDPCHKFAWCLDACIREKNIDSKRLKELQ 281
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD +KRG EQVLGDLSM LCDP+AI+ L+ S K L ++E+LPR L+++LRM
Sbjct: 282 GFLDGLKRGAEQVLGDLSMILCDPHAIHTLSMSVTKALQLATSSESLPRYQEDLIIVLRM 341
Query: 301 LALGLSAWVMIDTQG-------GNILIEIFRSCFKLY-DMVLQFLRTLFLRTHNVHYWPV 352
L LGL +W M+D+Q + + L D +Q L T PV
Sbjct: 342 LRLGLLSWQMVDSQQFKEMKLEATFITKFLPGIVSLMVDDQVQLLSGRLDET-ATQLDPV 400
Query: 353 PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSS 412
P V +++++A II++YY L+ A+ D G+ R+L +LA+ + D + D LH L S
Sbjct: 401 PQCVITANRDNTMANIITIYYGLNIAKLHDVKGIARILPLLASCDIDTVYSDTILHMLVS 460
Query: 413 Y 413
+
Sbjct: 461 H 461
>gi|326930226|ref|XP_003211251.1| PREDICTED: negative elongation factor B-like [Meleagris gallopavo]
Length = 593
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 200/425 (47%), Positives = 261/425 (61%), Gaps = 78/425 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ ++PVVM ++++ + +K L++++ D++LYK EVKRQIW+DNQ+
Sbjct: 112 LLEKSFSLVKMPSIQPVVMCVMKHLPKVPEKKLKLVMADKDLYKACAVEVKRQIWQDNQA 171
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKENILF + ++ + FF P
Sbjct: 172 LFGDEVSPLLKQYILEKENILFSNDISVLHNFFSP------------------------- 206
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL MIG +VKLYDMVLQFLR
Sbjct: 207 ---------------------------SPKARRQGEVVQKLTQMIGKNVKLYDMVLQFLR 239
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDLEI +I +VDPCHKFTWCLDACIREK VD KR+REL
Sbjct: 240 TLFLRTRNVHYCTLRAELLMSLHDLEISEICTVDPCHKFTWCLDACIREKFVDNKRAREL 299
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ + LPRE+ L+LLLR
Sbjct: 300 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTIRHLQDLVGQDTLPRESPDLLLLLR 359
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNVHY----- 349
ML+LG AW MID+Q +F+ +++ +FL L T NV
Sbjct: 360 MLSLGQGAWDMIDSQ-------VFKEPKMEAELITKFLPMLMSFVVDDHTFNVDQKLPSE 412
Query: 350 ------WP--VPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
+P +P+A ++QE+ +AC I +YY LH + R++ +R+L L + SD A
Sbjct: 413 EKGPIPYPSTIPEAFTKFLQENRIACEIGLYYILHITKQRNKNAFLRLLPALVETFSDLA 472
Query: 402 FDDPF 406
F D F
Sbjct: 473 FSDIF 477
>gi|359070746|ref|XP_002691742.2| PREDICTED: negative elongation factor B [Bos taurus]
Length = 969
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/431 (46%), Positives = 262/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 485 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 544
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P+PK
Sbjct: 545 LFGDEVSPLLKQYIVEKESALFSTELSVLHNFFSPSPKT--------------------- 583
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 584 -------------------------------RRQGEVVQRLTRMVGRNVKLYDMVLQFLR 612
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ DI SVDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 613 TLFLRTRNVHYCTLRAELLMSLHDLDVGDICSVDPCHKFTWCLDACIRERFVDSKRAREL 672
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPR++ L+LLLR
Sbjct: 673 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTVRHLQELVGQEVLPRDSPDLLLLLR 732
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNV------- 347
+LALG AW MID+Q +F+ ++V +FL L T NV
Sbjct: 733 LLALGQGAWDMIDSQ-------VFKEPKMEVELVTRFLPMLMSFVVDDHTFNVDQKLPAE 785
Query: 348 HYWPV------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
PV P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 786 EKAPVTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 845
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 846 FGDIFLHLLTG 856
>gi|358422033|ref|XP_590381.5| PREDICTED: negative elongation factor B [Bos taurus]
Length = 970
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/431 (46%), Positives = 262/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 486 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 545
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P+PK
Sbjct: 546 LFGDEVSPLLKQYIVEKESALFSTELSVLHNFFSPSPKT--------------------- 584
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 585 -------------------------------RRQGEVVQRLTRMVGRNVKLYDMVLQFLR 613
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ DI SVDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 614 TLFLRTRNVHYCTLRAELLMSLHDLDVGDICSVDPCHKFTWCLDACIRERFVDSKRAREL 673
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPR++ L+LLLR
Sbjct: 674 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTVRHLQELVGQEVLPRDSPDLLLLLR 733
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNV------- 347
+LALG AW MID+Q +F+ ++V +FL L T NV
Sbjct: 734 LLALGQGAWDMIDSQ-------VFKEPKMEVELVTRFLPMLMSFVVDDHTFNVDQKLPAE 786
Query: 348 HYWPV------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
PV P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 787 EKAPVTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 846
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 847 FGDIFLHLLTG 857
>gi|126302653|ref|XP_001366988.1| PREDICTED: negative elongation factor B [Monodelphis domestica]
Length = 580
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 262/430 (60%), Gaps = 76/430 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLL QYI EKENILF
Sbjct: 156 LFGDEVSPLLKQYILEKENILFS------------------------------------- 178
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
++V L++ P S + R GEVVQKL MIG +VKLYDMVLQFLRT
Sbjct: 179 --NEVSVLHNFFSP------------SPKTRRQGEVVQKLTQMIGKNVKLYDMVLQFLRT 224
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLM+LHDL+I DI VDPCHKFTWCLDACIREK VD KR+RELQ
Sbjct: 225 LFLRTRNVHYCTLRAELLMSLHDLDISDICMVDPCHKFTWCLDACIREKFVDNKRARELQ 284
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPRE+ L+LLLRM
Sbjct: 285 GFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTIRHLQELVGQETLPRESPDLLLLLRM 344
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNVHY------ 349
L+LG AW MID+Q +F+ +++ +FL L T NV
Sbjct: 345 LSLGQGAWDMIDSQ-------VFKEPKMEAELITRFLPMLMSFVVDDYTFNVDQKLPTEE 397
Query: 350 -----WP--VPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAF 402
+P +P++ ++QE +AC + +YY LH + R++ +R+L L + D AF
Sbjct: 398 KAPVTYPNTLPESFTKFLQEHRMACEMGLYYVLHITKQRNKNAFLRLLPGLVETFGDLAF 457
Query: 403 DDPFLHFLSS 412
D FLH L+
Sbjct: 458 SDIFLHLLTG 467
>gi|355680306|gb|AER96503.1| cofactor of BRCA1 [Mustela putorius furo]
Length = 579
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/431 (45%), Positives = 260/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LH+L++ DI SVDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHELDVGDICSVDPCHKFTWCLDACIRERFVDSKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPR++ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTVRHLQELVGQETLPRDSPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPV------- 352
+LALG AW MID+Q +F+ ++V +FL L + H + V
Sbjct: 344 LLALGQGAWDMIDSQ-------VFKEPKMEVELVTRFLPMLMSFVVDDHTFNVDQKLPAE 396
Query: 353 -----------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 397 EKAPVSYPNTLPESFTKFLQEQRMACEVGLYYVLHVTKQRNKNALLRLLPGLVETFGDLA 456
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 457 FGDIFLHLLTG 467
>gi|432894423|ref|XP_004075986.1| PREDICTED: negative elongation factor B-like [Oryzias latipes]
Length = 583
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 202/424 (47%), Positives = 258/424 (60%), Gaps = 76/424 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSFPLV++ ++PVVM +L++ + +K L++++ D+ELYK EVKRQIW+DNQ+
Sbjct: 95 LLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKLVMADKELYKVCAVEVKRQIWQDNQA 154
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLL QYI EKE LF +L+ L F +P
Sbjct: 155 LFGDEVSPLLKQYIVEKEAALFSS-DLSILHNFFSP------------------------ 189
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVV KL HMIG +VKLYDMVLQFLRT
Sbjct: 190 --------------------------SPKTRRQGEVVLKLTHMIGKNVKLYDMVLQFLRT 223
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLM+LHDL+I +I SVDPCHKFTWCLDACIREK VD KR+RELQ
Sbjct: 224 LFLRTRNVHYCTLRAELLMSLHDLDISEICSVDPCHKFTWCLDACIREKFVDGKRARELQ 283
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD +K+G EQVLGDLSM LCDP+A N LA S M+ L L++ E+LPR++ L+LLLRM
Sbjct: 284 GFLDGVKKGQEQVLGDLSMILCDPFACNTLALSIMRNLQELLSQESLPRDSPDLMLLLRM 343
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPV-------- 352
L+LG AW MID+Q +F+ ++V +FL + + H + V
Sbjct: 344 LSLGQGAWDMIDSQ-------VFKEPRLDLEVVTRFLPAMMSVVVDDHTFTVEQKLPNEE 396
Query: 353 ----------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAF 402
PDA Y+ + VAC + +YY LH A+ R++ L R+L L S +D AF
Sbjct: 397 KSSLTYPTGLPDAFSRYLLNNRVACEMGLYYVLHIAKLRNKNALQRLLPALVDSYNDMAF 456
Query: 403 DDPF 406
D F
Sbjct: 457 SDIF 460
>gi|395844456|ref|XP_003794977.1| PREDICTED: negative elongation factor B [Otolemur garnettii]
Length = 685
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 197/431 (45%), Positives = 262/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 201 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 260
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 261 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 295
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL M+G +VKLYDMVLQFLR
Sbjct: 296 ---------------------------SPKTRRQGEVVQKLTQMVGRNVKLYDMVLQFLR 328
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ DI +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 329 TLFLRTRNVHYCTLRAELLMSLHDLDVGDICTVDPCHKFTWCLDACIRERFVDSKRAREL 388
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR
Sbjct: 389 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTIRHLQELVGQETLPRDSPDLLLLLR 448
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNVH------ 348
+LALG AW MID+Q +F+ +++ +FL L T NV
Sbjct: 449 LLALGQGAWDMIDSQ-------VFKEPKMEVELITRFLPMLMSFVVDDYTFNVDQKLPAE 501
Query: 349 -----YWP--VPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
+P +P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 502 EKVPVMYPNTLPESFTKFLQEQRMACEVGLYYVLHVTKQRNKNALLRLLPGLVETFGDLA 561
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 562 FSDIFLHLLTG 572
>gi|348574450|ref|XP_003473003.1| PREDICTED: negative elongation factor B-like [Cavia porcellus]
Length = 580
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 193/431 (44%), Positives = 261/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKEN LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKENALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ DI +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLDVGDICTVDPCHKFTWCLDACIRERFVDSKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L++ E LPR++ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTIRHLQELVSQEMLPRDSPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPV------- 352
+LALG AW +ID+Q +F+ +++ +FL L + + + V
Sbjct: 344 LLALGQGAWDLIDSQ-------VFKEPKMEVELITKFLPMLMSFVVDDYTFSVDQKLPAE 396
Query: 353 -----------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 397 EKAPITYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 456
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 457 FSDIFLHLLTG 467
>gi|165377254|ref|NP_001101287.2| negative elongation factor B [Rattus norvegicus]
gi|149039415|gb|EDL93635.1| similar to cofactor of BRCA1; negative elongation factor protein B
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 580
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/431 (45%), Positives = 262/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ DI +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLDVSDICTVDPCHKFTWCLDACIRERFVDSKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L++ E LPR++ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTIRHLQELVSQETLPRDSPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNV------- 347
+LALG AW +ID+Q +F+ +++ +FL L T NV
Sbjct: 344 LLALGQGAWDLIDSQ-------VFKEPKMEAELITKFLPMLMSFVVDDYTFNVDQKLPAE 396
Query: 348 HYWPV------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
PV P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 397 EKAPVTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 456
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 457 FSDIFLHLLTG 467
>gi|354503368|ref|XP_003513753.1| PREDICTED: negative elongation factor B [Cricetulus griseus]
gi|344251302|gb|EGW07406.1| Negative elongation factor B [Cricetulus griseus]
Length = 580
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/431 (45%), Positives = 262/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ DI +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLDVSDICTVDPCHKFTWCLDACIRERFVDSKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L++ E LPR++ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTIRHLQELVSQETLPRDSPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNV------- 347
+LALG AW +ID+Q +F+ +++ +FL L T NV
Sbjct: 344 LLALGQGAWDLIDSQ-------VFKEPKMEAELITKFLPMLMSFVVDDYTFNVDQKLPAE 396
Query: 348 HYWPV------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
PV P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 397 EKAPVTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 456
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 457 FSDIFLHLLTG 467
>gi|133777873|gb|AAI14765.1| COBRA1 protein [Bos taurus]
Length = 496
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 195/431 (45%), Positives = 260/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 12 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 71
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 72 LFGDEVSPLLKQYIVEKESALFSTELSVLHNFFSP------------------------- 106
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 107 ---------------------------SPKTRRQGEVVQRLTRMVGRNVKLYDMVLQFLR 139
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ DI SVDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 140 TLFLRTRNVHYCTLRAELLMSLHDLDVGDICSVDPCHKFTWCLDACIRERFVDSKRAREL 199
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPR++ L+LLLR
Sbjct: 200 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTVRHLQELVGQEVLPRDSPDLLLLLR 259
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPV------- 352
+LALG AW MID+Q +F+ ++V +FL L + H + V
Sbjct: 260 LLALGQGAWDMIDSQ-------VFKEPKMEVELVTRFLPMLMSFVVDDHTFNVDQKLPAE 312
Query: 353 -----------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 313 EKAPVTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 372
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 373 FGDIFLHLLTG 383
>gi|165377251|ref|NP_067368.2| negative elongation factor B [Mus musculus]
gi|38372348|sp|Q8C4Y3.2|NELFB_MOUSE RecName: Full=Negative elongation factor B; Short=NELF-B; AltName:
Full=Cofactor of BRCA1
gi|148676262|gb|EDL08209.1| RIKEN cDNA A730008L03, isoform CRA_b [Mus musculus]
Length = 580
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 195/431 (45%), Positives = 263/431 (61%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ DI +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLDVSDICTVDPCHKFTWCLDACIRERFVDSKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L++ E LPR++ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTIRHLQELVSQETLPRDSPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLR-----THNVHY----- 349
+LALG AW +ID+Q +F+ +++ +FL L T NV
Sbjct: 344 LLALGQGAWDLIDSQ-------VFKEPKMEAELITKFLPMLMSLVVDDFTFNVDQKLPAE 396
Query: 350 ------WP--VPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
+P +P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 397 EKASVTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 456
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 457 FSDIFLHLLTG 467
>gi|440894521|gb|ELR46952.1| Negative elongation factor B, partial [Bos grunniens mutus]
Length = 532
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 195/431 (45%), Positives = 260/431 (60%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 62 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 121
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 122 LFGDEVSPLLKQYIVEKESALFSTELSVLHNFFSP------------------------- 156
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 157 ---------------------------SPKTRRQGEVVQRLTRMVGRNVKLYDMVLQFLR 189
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ DI SVDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 190 TLFLRTRNVHYCTLRAELLMSLHDLDVGDICSVDPCHKFTWCLDACIRERFVDSKRAREL 249
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPR++ L+LLLR
Sbjct: 250 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTVRHLQELVGQEVLPRDSPDLLLLLR 309
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPV------- 352
+LALG AW MID+Q +F+ ++V +FL L + H + V
Sbjct: 310 LLALGQGAWDMIDSQ-------VFKEPKMEVELVTRFLPMLMSFVVDDHTFNVDQKLPAE 362
Query: 353 -----------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 363 EKAPVTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 422
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 423 FGDIFLHLLTG 433
>gi|50510833|dbj|BAD32402.1| mKIAA1182 protein [Mus musculus]
Length = 520
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 195/431 (45%), Positives = 263/431 (61%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 36 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 95
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 96 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 130
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL M+G +VKLYDMVLQFLR
Sbjct: 131 ---------------------------SPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLR 163
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ DI +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 164 TLFLRTRNVHYCTLRAELLMSLHDLDVSDICTVDPCHKFTWCLDACIRERFVDSKRAREL 223
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L++ E LPR++ L+LLLR
Sbjct: 224 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTIRHLQELVSQETLPRDSPDLLLLLR 283
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLR-----THNVHY----- 349
+LALG AW +ID+Q +F+ +++ +FL L T NV
Sbjct: 284 LLALGQGAWDLIDSQ-------VFKEPKMEAELITKFLPMLMSLVVDDFTFNVDQKLPAE 336
Query: 350 ------WP--VPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
+P +P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 337 EKASVTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 396
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 397 FSDIFLHLLTG 407
>gi|73967426|ref|XP_548351.2| PREDICTED: negative elongation factor B isoform 1 [Canis lupus
familiaris]
Length = 580
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 194/429 (45%), Positives = 259/429 (60%), Gaps = 78/429 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKARRQGEVVQKLTQMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LH+L++ DI SVDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHELDVGDICSVDPCHKFTWCLDACIRERFVDSKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPR++ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTVRHLQELVGQETLPRDSPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPV------- 352
+LALG AW MID+Q +F+ +++ +FL L + H + V
Sbjct: 344 LLALGQGAWDMIDSQ-------VFKEPKMEVELITRFLPMLMSFVVDDHTFNVDQKLPAE 396
Query: 353 -----------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 397 EKAPVTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 456
Query: 402 FDDPFLHFL 410
F D FLH L
Sbjct: 457 FGDIFLHLL 465
>gi|402895950|ref|XP_003911073.1| PREDICTED: negative elongation factor B [Papio anubis]
gi|380811504|gb|AFE77627.1| negative elongation factor B [Macaca mulatta]
gi|380811506|gb|AFE77628.1| negative elongation factor B [Macaca mulatta]
gi|383411247|gb|AFH28837.1| negative elongation factor B [Macaca mulatta]
gi|383411249|gb|AFH28838.1| negative elongation factor B [Macaca mulatta]
gi|384946300|gb|AFI36755.1| negative elongation factor B [Macaca mulatta]
gi|384946302|gb|AFI36756.1| negative elongation factor B [Macaca mulatta]
Length = 580
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 197/431 (45%), Positives = 264/431 (61%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQRLTQMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ +I +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLDVGEICTVDPCHKFTWCLDACIRERFVDSKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTL--FL---RTHNVHY----- 349
+LALG AW MID+Q +F+ +++ +FL L FL T NV
Sbjct: 344 LLALGQGAWDMIDSQ-------VFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAE 396
Query: 350 ------WP--VPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
+P +P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 397 EKAPVSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 456
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 457 FGDIFLHLLTG 467
>gi|397492274|ref|XP_003817052.1| PREDICTED: negative elongation factor B [Pan paniscus]
Length = 580
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 198/431 (45%), Positives = 263/431 (61%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQRLTRMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ +I +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLDVGEICTVDPCHKFTWCLDACIRERFVDSKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTL--FL---RTHNV------- 347
+LALG AW MID+Q +F+ +++ +FL L FL T NV
Sbjct: 344 LLALGQGAWDMIDSQ-------VFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAE 396
Query: 348 HYWPV------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
PV P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 397 EKGPVSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 456
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 457 FGDIFLHLLTG 467
>gi|426363708|ref|XP_004048976.1| PREDICTED: negative elongation factor B [Gorilla gorilla gorilla]
Length = 580
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/431 (45%), Positives = 263/431 (61%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSAELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQRLTRMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ +I +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLDVGEICTVDPCHKFTWCLDACIRERFVDSKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTL--FL---RTHNV------- 347
+LALG AW MID+Q +F+ +++ +FL L FL T NV
Sbjct: 344 LLALGQGAWDMIDSQ-------VFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAE 396
Query: 348 HYWPV------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
PV P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 397 EKAPVSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 456
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 457 FGDIFLHLLTG 467
>gi|20070260|ref|NP_056271.2| negative elongation factor B [Homo sapiens]
gi|38372378|sp|Q8WX92.1|NELFB_HUMAN RecName: Full=Negative elongation factor B; Short=NELF-B; AltName:
Full=Cofactor of BRCA1
gi|18448937|gb|AAL69965.1|AF464935_1 cofactor of BRCA1 [Homo sapiens]
gi|117645402|emb|CAL38167.1| hypothetical protein [synthetic construct]
gi|168273188|dbj|BAG10433.1| negative elongation factor B [synthetic construct]
gi|193786949|dbj|BAG52272.1| unnamed protein product [Homo sapiens]
gi|410225772|gb|JAA10105.1| cofactor of BRCA1 [Pan troglodytes]
gi|410251430|gb|JAA13682.1| cofactor of BRCA1 [Pan troglodytes]
gi|410302764|gb|JAA29982.1| cofactor of BRCA1 [Pan troglodytes]
gi|410354259|gb|JAA43733.1| cofactor of BRCA1 [Pan troglodytes]
Length = 580
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/431 (45%), Positives = 264/431 (61%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQRLTRMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ +I +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLDVGEICTVDPCHKFTWCLDACIRERFVDSKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTL--FL---RTHNVHY----- 349
+LALG AW MID+Q +F+ +++ +FL L FL T NV
Sbjct: 344 LLALGQGAWDMIDSQ-------VFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAE 396
Query: 350 ------WP--VPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
+P +P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 397 EKAPVSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 456
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 457 FGDIFLHLLTG 467
>gi|296191259|ref|XP_002743561.1| PREDICTED: negative elongation factor B [Callithrix jacchus]
Length = 851
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/431 (45%), Positives = 263/431 (61%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 367 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 426
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 427 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 461
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 462 ---------------------------SPKTRRQGEVVQRLTQMVGKNVKLYDMVLQFLR 494
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ +I +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 495 TLFLRTRNVHYCTLRAELLMSLHDLDVGEICTVDPCHKFTWCLDACIRERFVDSKRAREL 554
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR
Sbjct: 555 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLR 614
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTL--FL---RTHNV------- 347
+LALG AW MID+Q +F+ +++ +FL L FL T NV
Sbjct: 615 LLALGQGAWDMIDSQ-------VFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAE 667
Query: 348 HYWPV------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
PV P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 668 EKAPVSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 727
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 728 FGDIFLHLLTG 738
>gi|410922192|ref|XP_003974567.1| PREDICTED: negative elongation factor B-like [Takifugu rubripes]
Length = 584
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 199/424 (46%), Positives = 257/424 (60%), Gaps = 76/424 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSFPLV++ ++PVVM +L++ + +K L++++ D+ELYK EVKRQIW+DNQ+
Sbjct: 95 LLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKIVMADKELYKVCAVEVKRQIWQDNQA 154
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLL QYI EKE LF
Sbjct: 155 LFGDEVSPLLKQYIVEKEAALFS------------------------------------- 177
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
+ V L+S P S + R GEVV KL MIG +VKLYDMVLQFLRT
Sbjct: 178 --NDVSVLHSFFSP------------SPKTRRQGEVVLKLTQMIGKNVKLYDMVLQFLRT 223
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLM+LHDL+I +I SVDPCHKFTWCLDACIREK VD KR+RELQ
Sbjct: 224 LFLRTRNVHYCTLRAELLMSLHDLDITEICSVDPCHKFTWCLDACIREKFVDGKRARELQ 283
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD +K+G EQVLGDLSM LCDP+A N L S M+ L L++ +ALPR++ L+LLLRM
Sbjct: 284 GFLDGVKKGQEQVLGDLSMILCDPFACNTLVLSIMRNLQELLSQDALPRDSPDLMLLLRM 343
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL------------------ 342
L+LG AW MID+Q +F+ ++V +FL +
Sbjct: 344 LSLGQGAWDMIDSQ-------VFKEPRLDLEVVTRFLPAMMSVVVDDNIFTVEQKLPSEE 396
Query: 343 RTHNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAF 402
++ V+ +PDA Y+QE+ VAC + +YY H A+ R++ L R+L L + +D AF
Sbjct: 397 KSSQVYPTLLPDAFYRYLQENRVACEMGLYYIFHIAKLRNKNALQRLLPSLVDTYNDMAF 456
Query: 403 DDPF 406
D F
Sbjct: 457 GDIF 460
>gi|348535182|ref|XP_003455080.1| PREDICTED: negative elongation factor B [Oreochromis niloticus]
Length = 583
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 199/424 (46%), Positives = 258/424 (60%), Gaps = 76/424 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSFPLV++ ++PVVM +L++ + +K L++++ D+ELYK EVKRQIW+DNQ+
Sbjct: 95 LLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKMVMADKELYKVCAVEVKRQIWQDNQA 154
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLL QYI EKE LF +L+ L F +P
Sbjct: 155 LFGDEVSPLLKQYIVEKEAALFSS-DLSILHNFFSP------------------------ 189
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVV KL MIG +VKLYDMVLQFLRT
Sbjct: 190 --------------------------SPKTRRQGEVVLKLTQMIGKNVKLYDMVLQFLRT 223
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLM+LHDL+I +I SVDPCHKFTWCLDACIREK VD KR+RELQ
Sbjct: 224 LFLRTRNVHYCTLRAELLMSLHDLDISEICSVDPCHKFTWCLDACIREKFVDGKRARELQ 283
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD +K+G EQVLGDLSM LCDP+A N L S M+ L L++ +ALPR++ L+LLLRM
Sbjct: 284 GFLDGVKKGQEQVLGDLSMILCDPFACNTLVLSIMRNLQELLSQDALPRDSPDLMLLLRM 343
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPV-------- 352
L+LG AW MID+Q +F+ ++V +FL + + H + V
Sbjct: 344 LSLGQGAWDMIDSQ-------VFKEPRLDLEVVTRFLPAMMSVVVDDHTFTVEQKLPSEE 396
Query: 353 ----------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAF 402
P++ Y+QE+ VAC + +YY LH A+ R++ L R+L L + +D AF
Sbjct: 397 KSSLSYPTTLPESFNRYLQENRVACEMGLYYVLHIAKLRNKNALQRLLPALVETYNDMAF 456
Query: 403 DDPF 406
D F
Sbjct: 457 GDIF 460
>gi|410979603|ref|XP_003996171.1| PREDICTED: negative elongation factor B [Felis catus]
Length = 593
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 194/429 (45%), Positives = 259/429 (60%), Gaps = 78/429 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LH+L++ DI SVDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHELDVGDICSVDPCHKFTWCLDACIRERFVDSKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPR++ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTVRHLQELVGQETLPRDSPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPV------- 352
+LALG AW MID+Q +F+ +++ +FL L + H + V
Sbjct: 344 LLALGQGAWDMIDSQ-------VFKEPKMEVELITRFLPMLMSFVVDDHTFNVDQKLPAE 396
Query: 353 -----------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 397 EKAPVTYPNTLPESFTKFLQEHRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 456
Query: 402 FDDPFLHFL 410
F D FLH L
Sbjct: 457 FGDIFLHLL 465
>gi|345326958|ref|XP_003431108.1| PREDICTED: LOW QUALITY PROTEIN: negative elongation factor B-like
[Ornithorhynchus anatinus]
Length = 553
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 194/428 (45%), Positives = 260/428 (60%), Gaps = 76/428 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ ++PVVM ++++ + +K L++++ D++LY+ EVKRQIW+DNQ+
Sbjct: 72 LLEKSFSLVKMPSIQPVVMCVMKHLPKVPEKKLKLVMADKDLYRACSVEVKRQIWQDNQA 131
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLL YI EKEN++F +L+ L F +P
Sbjct: 132 LFGDEVSPLLKHYILEKENLVFSS-DLSVLHNFFSP------------------------ 166
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVVQKL MIG +VKLYDMVLQFLRT
Sbjct: 167 --------------------------SPKTRRQGEVVQKLTQMIGKNVKLYDMVLQFLRT 200
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYC+LRAELLM+LHDL+I DI +VDPCHKFTWCLDACIRE+ VD KR+RELQ
Sbjct: 201 LFLRTRNVHYCSLRAELLMSLHDLDISDICTVDPCHKFTWCLDACIRERFVDNKRARELQ 260
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ + LPRE+ L+LLLRM
Sbjct: 261 GFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTIRHLQELVGQDTLPRESPDLMLLLRM 320
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLF--------------LRTHN 346
L+LG AW MID+Q +F+ +++ +FL L L T +
Sbjct: 321 LSLGQGAWDMIDSQ-------VFKEPKMEVELITRFLPMLMSFVVDDYTFNVDQKLPTED 373
Query: 347 VHYWP----VPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAF 402
P +P+ ++Q+ +AC + +YY LH + R++ +R+L L + SD AF
Sbjct: 374 KVPVPYPSTLPEGFTKFLQDHRIACEVGLYYVLHITKQRNKNAFLRLLPGLVETFSDLAF 433
Query: 403 DDPFLHFL 410
D FLH L
Sbjct: 434 GDIFLHLL 441
>gi|37362200|gb|AAQ91228.1| cofactor of BRCA2 [Danio rerio]
Length = 594
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 191/423 (45%), Positives = 247/423 (58%), Gaps = 72/423 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSFPLV++ ++PVVM +L++ + +K L+ ++ D+ELYK EVKRQIW+DNQ+
Sbjct: 95 LLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKQVMADKELYKVCAVEVKRQIWQDNQA 154
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLL QYI EKE LF + +L+ L F +P
Sbjct: 155 LFGDEVSPLLKQYIVEKEAALFSN-DLSILHNFFSP------------------------ 189
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVV KL MIG +VKLYDMVLQFLRT
Sbjct: 190 --------------------------SPKTRRQGEVVLKLTQMIGKNVKLYDMVLQFLRT 223
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHYCTLRAELLM+LHDL+I +I SVDPCHKF+WCLDACIREK VD KR+RELQ
Sbjct: 224 LFLRTRNVHYCTLRAELLMSLHDLDISEICSVDPCHKFSWCLDACIREKFVDAKRARELQ 283
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD +K+G EQVLGDLSM LCDP+A N L S ++ L L++ +ALPR++ L +
Sbjct: 284 GFLDGVKKGQEQVLGDLSMILCDPFACNTLVLSTVRNLQELLSKDALPRDSPDLSPPAAV 343
Query: 301 LALGLSAWVMIDTQ---------GGNILIEIFRSC--------FKLYDMVLQFLRTLFLR 343
L+LG AW MID+Q GG + C F + L R
Sbjct: 344 LSLGQGAWDMIDSQVFKEPRMDLGGGDTLSACHECHSGGTNSTFNGEPKPGRAKEKLLSR 403
Query: 344 THNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
T +P+ ++ ++ VAC I +YY LH A+ R++ L R+L L + +D AF
Sbjct: 404 TPTT----LPETFSRFILDNRVACEIGLYYALHIAKLRNKNALQRLLPALVDTYNDMAFG 459
Query: 404 DPF 406
D F
Sbjct: 460 DIF 462
>gi|395741251|ref|XP_002820475.2| PREDICTED: negative elongation factor B [Pongo abelii]
Length = 876
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/431 (45%), Positives = 263/431 (61%), Gaps = 78/431 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQI +DNQ+
Sbjct: 392 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQISQDNQA 451
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 452 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 486
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 487 ---------------------------SPKTRRQGEVVQRLTQMVGKNVKLYDMVLQFLR 519
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ +I +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 520 TLFLRTRNVHYCTLRAELLMSLHDLDVGEICTVDPCHKFTWCLDACIRERFVDSKRAREL 579
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L++ E LPR++ L+LLLR
Sbjct: 580 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTVRHLQELVSQETLPRDSPDLLLLLR 639
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTL--FL---RTHNV------- 347
+LALG AW MID+Q +F+ +++ +FL L FL T NV
Sbjct: 640 LLALGQGAWDMIDSQ-------VFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAE 692
Query: 348 HYWPV------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
PV P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 693 EKAPVSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 752
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 753 FGDIFLHLLTG 763
>gi|281345333|gb|EFB20917.1| hypothetical protein PANDA_015794 [Ailuropoda melanoleuca]
Length = 589
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/438 (44%), Positives = 259/438 (59%), Gaps = 87/438 (19%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHK---------FTWCLDACIREKN 230
TLFLRT NVHYCTLRAELLM+LHDL++ DI SVDPCHK FTWCLDACIRE+
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLDVGDICSVDPCHKSTPAPPAAAFTWCLDACIRERF 283
Query: 231 VDIKRSRELQGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRE 290
VD KR+RELQGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPR+
Sbjct: 284 VDSKRARELQGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTVRHLQELVGQETLPRD 343
Query: 291 NTVLVLLLRMLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYW 350
+ L+LLLR+LALG AW MID+Q +F+ +++ +FL TL + H +
Sbjct: 344 SPDLLLLLRLLALGQGAWDMIDSQ-------VFKEPKMEVELITRFLPTLMSFVVDDHTF 396
Query: 351 PV------------------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGV 392
V P++ ++QE +AC + +YY LH + R+ L+R+L
Sbjct: 397 NVDQKLPAEEKAPVTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNTKALLRLLPG 456
Query: 393 LATSESDRAFDDPFLHFL 410
L + D AF D FLH L
Sbjct: 457 LVETFGDLAFGDIFLHLL 474
>gi|390350352|ref|XP_781074.3| PREDICTED: negative elongation factor B [Strongylocentrotus
purpuratus]
Length = 570
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 187/424 (44%), Positives = 247/424 (58%), Gaps = 74/424 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L K FPL+RVK ++PVVM++++ I +KYL VLV DR LY EVK+QIW+ N S
Sbjct: 94 LLSKCFPLIRVKSIQPVVMSVMKCLPKIPEKYLTVLVEDRSLYDVASIEVKQQIWQRNPS 153
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLL+ YI+ KE++LF
Sbjct: 154 LFGDEVSPLLTDYIKNKESVLFGSE----------------------------------- 178
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
A+NS+M S + R G VVQKL M+G SVKL+DMVLQFLRT
Sbjct: 179 ------AVNSQM----------FFLVSPKMRRQGHVVQKLTGMVGKSVKLFDMVLQFLRT 222
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFL T N+HYCTLRAELLM+LHDLEI +I + DPCHKFTW LDAC+R+K VD K+++ELQ
Sbjct: 223 LFLSTRNMHYCTLRAELLMSLHDLEIHEICTEDPCHKFTWTLDACVRDKQVDDKKAKELQ 282
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD ++RG EQVLGDLSM LCDP+A++ LATS ++ + LIN + LPR++ L LLRM
Sbjct: 283 GFLDGVRRGQEQVLGDLSMILCDPFAVHTLATSVIRHMTSLINQDKLPRDSPDLTSLLRM 342
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLF-------LRTHN------- 346
L+LGL AW M+D+Q FR D++L+FL L +R N
Sbjct: 343 LSLGLGAWDMLDSQR-------FREPKLENDLILKFLPALLSLLVDDQMRIVNRRLNDTG 395
Query: 347 --VHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDD 404
+P + Y++ + + + +YY LH R++ L R L + E D +F+D
Sbjct: 396 DDSDLKTLPAFLLKYIRRNKIGATLILYYVLHVTSKRNKDALARALPNIVKMEGDLSFND 455
Query: 405 PFLH 408
FLH
Sbjct: 456 IFLH 459
>gi|149039414|gb|EDL93634.1| similar to cofactor of BRCA1; negative elongation factor protein B
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 475
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/418 (45%), Positives = 253/418 (60%), Gaps = 78/418 (18%)
Query: 14 LRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGDEVSPLLSQY 73
L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+LFGDEVSPLL QY
Sbjct: 4 LQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQALFGDEVSPLLKQY 63
Query: 74 IREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKM 132
I EKE+ LF ++ + FF P
Sbjct: 64 ILEKESALFSTELSVLHNFFSP-------------------------------------- 85
Query: 133 PPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTLFLRTHNVHYCT 192
S + R GEVVQKL M+G +VKLYDMVLQFLRTLFLRT NVHYCT
Sbjct: 86 --------------SPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLRTLFLRTRNVHYCT 131
Query: 193 LRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIKRGHEQ 252
LRAELLM+LHDL++ DI +VDPCHKFTWCLDACIRE+ VD KR+RELQGFLD +K+G EQ
Sbjct: 132 LRAELLMSLHDLDVSDICTVDPCHKFTWCLDACIRERFVDSKRARELQGFLDGVKKGQEQ 191
Query: 253 VLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMID 312
VLGDLSM LCDP+AIN L+ S ++ L L++ E LPR++ L+LLLR+LALG AW +ID
Sbjct: 192 VLGDLSMILCDPFAINTLSLSTIRHLQELVSQETLPRDSPDLLLLLRLLALGQGAWDLID 251
Query: 313 TQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNVHY-----------WP--VPD 354
+Q +F+ +++ +FL L T NV +P +P+
Sbjct: 252 SQ-------VFKEPKMEAELITKFLPMLMSFVVDDYTFNVDQKLPAEEKAPVTYPNTLPE 304
Query: 355 AVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSS 412
+ ++QE +AC + +YY LH + R++ L+R+L L + D AF D FLH L+
Sbjct: 305 SFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFSDIFLHLLTG 362
>gi|13435819|gb|AAH04762.1| Cobra1 protein [Mus musculus]
gi|148676261|gb|EDL08208.1| RIKEN cDNA A730008L03, isoform CRA_a [Mus musculus]
Length = 475
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/418 (45%), Positives = 253/418 (60%), Gaps = 78/418 (18%)
Query: 14 LRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGDEVSPLLSQY 73
L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+LFGDEVSPLL QY
Sbjct: 4 LQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQALFGDEVSPLLKQY 63
Query: 74 IREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKM 132
I EKE+ LF ++ + FF P
Sbjct: 64 ILEKESALFSTELSVLHNFFSP-------------------------------------- 85
Query: 133 PPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTLFLRTHNVHYCT 192
S + R GEVVQKL M+G +VKLYDMVLQFLRTLFLRT NVHYCT
Sbjct: 86 --------------SPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLRTLFLRTRNVHYCT 131
Query: 193 LRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIKRGHEQ 252
LRAELLM+LHDL++ DI +VDPCHKFTWCLDACIRE+ VD KR+RELQGFLD +K+G EQ
Sbjct: 132 LRAELLMSLHDLDVSDICTVDPCHKFTWCLDACIRERFVDSKRARELQGFLDGVKKGQEQ 191
Query: 253 VLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMID 312
VLGDLSM LCDP+AIN L+ S ++ L L++ E LPR++ L+LLLR+LALG AW +ID
Sbjct: 192 VLGDLSMILCDPFAINTLSLSTIRHLQELVSQETLPRDSPDLLLLLRLLALGQGAWDLID 251
Query: 313 TQGGNILIEIFRSCFKLYDMVLQFLRTLFLR-----THNVHY-----------WP--VPD 354
+Q +F+ +++ +FL L T NV +P +P+
Sbjct: 252 SQ-------VFKEPKMEAELITKFLPMLMSLVVDDFTFNVDQKLPAEEKASVTYPNTLPE 304
Query: 355 AVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSS 412
+ ++QE +AC + +YY LH + R++ L+R+L L + D AF D FLH L+
Sbjct: 305 SFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFSDIFLHLLTG 362
>gi|7670478|dbj|BAA95090.1| unnamed protein product [Mus musculus]
Length = 475
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/418 (45%), Positives = 253/418 (60%), Gaps = 78/418 (18%)
Query: 14 LRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGDEVSPLLSQY 73
L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+LFGDEVSPLL QY
Sbjct: 4 LQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQALFGDEVSPLLKQY 63
Query: 74 IREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKM 132
I EKE+ LF ++ + FF P
Sbjct: 64 ILEKESALFSTELSVLHNFFSP-------------------------------------- 85
Query: 133 PPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTLFLRTHNVHYCT 192
S + R GEVVQKL M+G +VKLYDMVLQFLRTLFLRT NVHYCT
Sbjct: 86 --------------SPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLRTLFLRTRNVHYCT 131
Query: 193 LRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIKRGHEQ 252
LRAELLM+LHDL++ DI +VDPCHKFTWCLDACIRE+ VD KR+RELQGFLD +K+G EQ
Sbjct: 132 LRAELLMSLHDLDVSDICTVDPCHKFTWCLDACIRERFVDSKRARELQGFLDGVKKGQEQ 191
Query: 253 VLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMID 312
VLGDLSM LCDP+AIN L+ S ++ L L++ E LPR++ L+LLLR+LALG AW +ID
Sbjct: 192 VLGDLSMILCDPFAINTLSLSTIRHLQELVSQETLPRDSPDLLLLLRLLALGQGAWDLID 251
Query: 313 TQGGNILIEIFRSCFKLYDMVLQFLRTLFLR-----THNVHY-----------WP--VPD 354
+Q +F+ +++ +FL L T NV +P +P+
Sbjct: 252 SQ-------VFKEPKMEAELITKFLPMLMSLVVDDFTFNVDQKLPAEEKASVTYPNTLPE 304
Query: 355 AVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSS 412
+ ++QE +AC + +YY LH + R++ L+R+L L + D AF D FLH L+
Sbjct: 305 SFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFSDIFLHLLTG 362
>gi|403301412|ref|XP_003941384.1| PREDICTED: negative elongation factor B [Saimiri boliviensis
boliviensis]
Length = 475
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 191/418 (45%), Positives = 254/418 (60%), Gaps = 78/418 (18%)
Query: 14 LRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGDEVSPLLSQY 73
L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+LFGDEVSPLL QY
Sbjct: 4 LQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQALFGDEVSPLLKQY 63
Query: 74 IREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKM 132
I EKE+ LF ++ + FF P
Sbjct: 64 ILEKESALFSTELSVLHNFFSP-------------------------------------- 85
Query: 133 PPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTLFLRTHNVHYCT 192
S + R GEVVQ+L M+G +VKLYDMVLQFLRTLFLRT NVHYCT
Sbjct: 86 --------------SPKTRRQGEVVQRLTQMVGKNVKLYDMVLQFLRTLFLRTRNVHYCT 131
Query: 193 LRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIKRGHEQ 252
LRAELLM+LHDL++ +I +VDPCHKFTWCLDACIRE+ VD KR+RELQGFLD +K+G EQ
Sbjct: 132 LRAELLMSLHDLDVGEICTVDPCHKFTWCLDACIRERFVDSKRARELQGFLDGVKKGQEQ 191
Query: 253 VLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMID 312
VLGDLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR+LALG AW MID
Sbjct: 192 VLGDLSMILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLRLLALGQGAWDMID 251
Query: 313 TQGGNILIEIFRSCFKLYDMVLQFLRTL--FL---RTHNVHY-----------WP--VPD 354
+Q +F+ +++ +FL L FL T NV +P +P+
Sbjct: 252 SQ-------VFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEKAAVSYPNTLPE 304
Query: 355 AVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSS 412
+ ++QE +AC + +YY LH + R++ L+R+L L + D AF D FLH L+
Sbjct: 305 SFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDIFLHLLTG 362
>gi|15080250|gb|AAH11892.1| COBRA1 protein [Homo sapiens]
Length = 475
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 191/418 (45%), Positives = 254/418 (60%), Gaps = 78/418 (18%)
Query: 14 LRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGDEVSPLLSQY 73
L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+LFGDEVSPLL QY
Sbjct: 4 LQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQALFGDEVSPLLKQY 63
Query: 74 IREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKM 132
I EKE+ LF ++ + FF P
Sbjct: 64 ILEKESALFSTELSVLHNFFSP-------------------------------------- 85
Query: 133 PPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTLFLRTHNVHYCT 192
S + R GEVVQ+L M+G +VKLYDMVLQFLRTLFLRT NVHYCT
Sbjct: 86 --------------SPKTRRQGEVVQRLTRMVGKNVKLYDMVLQFLRTLFLRTRNVHYCT 131
Query: 193 LRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIKRGHEQ 252
LRAELLM+LHDL++ +I +VDPCHKFTWCLDACIRE+ VD KR+RELQGFLD +K+G EQ
Sbjct: 132 LRAELLMSLHDLDVGEICTVDPCHKFTWCLDACIRERFVDSKRARELQGFLDGVKKGQEQ 191
Query: 253 VLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMID 312
VLGDLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR+LALG AW MID
Sbjct: 192 VLGDLSMILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLRLLALGQGAWDMID 251
Query: 313 TQGGNILIEIFRSCFKLYDMVLQFLRTL--FL---RTHNVHY-----------WP--VPD 354
+Q +F+ +++ +FL L FL T NV +P +P+
Sbjct: 252 SQ-------VFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEKAPVSYPNTLPE 304
Query: 355 AVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSS 412
+ ++QE +AC + +YY LH + R++ L+R+L L + D AF D FLH L+
Sbjct: 305 SFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDIFLHLLTG 362
>gi|41055805|ref|NP_956462.1| negative elongation factor B [Danio rerio]
gi|28279580|gb|AAH45409.1| Cofactor of BRCA1 [Danio rerio]
gi|182889114|gb|AAI64663.1| Cobra1 protein [Danio rerio]
Length = 583
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 194/424 (45%), Positives = 255/424 (60%), Gaps = 76/424 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSFPLV++ ++PVVM +L++ + +K L+ ++ D+ELYK EVKRQIW+DNQ+
Sbjct: 95 LLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKQVMADKELYKVCAVEVKRQIWQDNQA 154
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLL QYI EKE LF + +L+ L F +P
Sbjct: 155 LFGDEVSPLLKQYIVEKEAALFSN-DLSILHNFFSP------------------------ 189
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R GEVV KL MIG +VKLYDMVLQFLRT
Sbjct: 190 --------------------------SPKTRRQGEVVLKLTQMIGKNVKLYDMVLQFLRT 223
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT NVHY TLRAELLM+LHDL+I +I SVDPCHKF+WCLDACIREK VD KR+RELQ
Sbjct: 224 LFLRTRNVHYRTLRAELLMSLHDLDISEICSVDPCHKFSWCLDACIREKFVDAKRARELQ 283
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD +K+G EQVLGDLSM LCDP+A N L S ++ L L++ +ALPR++ L+LLLRM
Sbjct: 284 GFLDGVKKGQEQVLGDLSMILCDPFACNTLVLSTVRNLQELLSQDALPRDSPDLLLLLRM 343
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL------------------ 342
L+LG AW MID+Q +F+ ++V +FL +
Sbjct: 344 LSLGQGAWDMIDSQ-------VFKEPRMDLEVVTRFLPAMMSIVVDDYTFTVEQKLPSEE 396
Query: 343 RTHNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAF 402
+T + +P+ Y+ ++ VAC I +YY LH A+ R++ L R+L L + +D AF
Sbjct: 397 KTSLAYPTTLPETFSRYILDNRVACEIGLYYALHIAKLRNKNALQRLLPALVDTYNDMAF 456
Query: 403 DDPF 406
D F
Sbjct: 457 GDIF 460
>gi|10434169|dbj|BAB14157.1| unnamed protein product [Homo sapiens]
Length = 475
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/418 (45%), Positives = 253/418 (60%), Gaps = 78/418 (18%)
Query: 14 LRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGDEVSPLLSQY 73
L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+ FGDEVSPLL QY
Sbjct: 4 LQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQAFFGDEVSPLLKQY 63
Query: 74 IREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKM 132
I EKE+ LF ++ + FF P
Sbjct: 64 ILEKESALFSTELSVLHNFFSP-------------------------------------- 85
Query: 133 PPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTLFLRTHNVHYCT 192
S + R GEVVQ+L M+G +VKLYDMVLQFLRTLFLRT NVHYCT
Sbjct: 86 --------------SPKTRRQGEVVQRLTRMVGKNVKLYDMVLQFLRTLFLRTRNVHYCT 131
Query: 193 LRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIKRGHEQ 252
LRAELLM+LHDL++ +I +VDPCHKFTWCLDACIRE+ VD KR+RELQGFLD +K+G EQ
Sbjct: 132 LRAELLMSLHDLDVGEICTVDPCHKFTWCLDACIRERFVDSKRARELQGFLDGVKKGQEQ 191
Query: 253 VLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMID 312
VLGDLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR+LALG AW MID
Sbjct: 192 VLGDLSMILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLRLLALGQGAWDMID 251
Query: 313 TQGGNILIEIFRSCFKLYDMVLQFLRTL--FL---RTHNVHY-----------WP--VPD 354
+Q +F+ +++ +FL L FL T NV +P +P+
Sbjct: 252 SQ-------VFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEKAPVSYPNTLPE 304
Query: 355 AVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSS 412
+ ++QE +AC + +YY LH + R++ L+R+L L + D AF D FLH L+
Sbjct: 305 SFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDIFLHLLTG 362
>gi|301781522|ref|XP_002926190.1| PREDICTED: negative elongation factor B-like [Ailuropoda
melanoleuca]
Length = 612
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 197/461 (42%), Positives = 259/461 (56%), Gaps = 110/461 (23%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHK---------FTWCLDACIREKN 230
TLFLRT NVHYCTLRAELLM+LHDL++ DI SVDPCHK FTWCLDACIRE+
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLDVGDICSVDPCHKSTPAPPAAAFTWCLDACIRERF 283
Query: 231 VDIKRSRELQGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRE 290
VD KR+RELQGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPR
Sbjct: 284 VDSKRARELQGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTVRHLQELVGQETLPRV 343
Query: 291 NTV----------------LVLLLRMLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVL 334
+ + L+LLLR+LALG AW MID+Q +F+ +++
Sbjct: 344 SALGRPHATFWVDVWDSPDLLLLLRLLALGQGAWDMIDSQ-------VFKEPKMEVELIT 396
Query: 335 QFLRTLFLRTHNVHYWPV------------------PDAVQAY-------VQESSVACII 369
+FL TL + H + V P++ Y +QE +AC +
Sbjct: 397 RFLPTLMSFVVDDHTFNVDQKLPAEEKAPVTYPNTLPESFTKYGLQGHGFLQEQRMACEV 456
Query: 370 SMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFL 410
+YY LH + R+ L+R+L L + D AF D FLH L
Sbjct: 457 GLYYVLHITKQRNTKALLRLLPGLVETFGDLAFGDIFLHLL 497
>gi|351705285|gb|EHB08204.1| Negative elongation factor B [Heterocephalus glaber]
Length = 570
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 188/431 (43%), Positives = 253/431 (58%), Gaps = 88/431 (20%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKEN LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKENSLFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL M+G +VKLYDMVLQ
Sbjct: 191 ---------------------------SPKTRRQGEVVQKLTQMVGKNVKLYDMVLQ--- 220
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
NVHYCTLRAELLM+LHDL++ DI +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 221 -------NVHYCTLRAELLMSLHDLDVGDICTVDPCHKFTWCLDACIRERFVDSKRAREL 273
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L++ E LPR++ L+LLLR
Sbjct: 274 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTIRHLQELVSQETLPRDSPDLLLLLR 333
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNV------- 347
+LALG AW +ID+Q +F+ +++ +FL L T NV
Sbjct: 334 LLALGQGAWDLIDSQ-------VFKEPKMEVELITKFLPMLMSFVVDDYTFNVDQKLPSE 386
Query: 348 HYWPV------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRA 401
PV P++ ++QE +AC + +YY LH + R++ L+R+L L + D A
Sbjct: 387 EKAPVTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLA 446
Query: 402 FDDPFLHFLSS 412
F D FLH L+
Sbjct: 447 FSDIFLHLLTG 457
>gi|47213281|emb|CAF92133.1| unnamed protein product [Tetraodon nigroviridis]
Length = 850
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 198/460 (43%), Positives = 259/460 (56%), Gaps = 113/460 (24%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSFPLV++ ++PVVM +L++ + +K L++++ D+ELYK EVKRQIW+DNQ+
Sbjct: 95 LLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKIVMADKELYKVCAVEVKRQIWQDNQA 154
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE LF ++ + FF P+
Sbjct: 155 LFGDEVSPLLKQYIVEKEAALFSSDVSVLHSFFSPS------------------------ 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
P R R GEVV KL MIG +VKLYDMVLQFLR
Sbjct: 191 --------------PKTR--------------RQGEVVLKLTQMIGKNVKLYDMVLQFLR 222
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL+I +I SVDPCHKFTWCLDACIREK VD KR+REL
Sbjct: 223 TLFLRTRNVHYCTLRAELLMSLHDLDITEICSVDPCHKFTWCLDACIREKFVDGKRAREL 282
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+A N L S M+ L L++ +ALPR++ L+LLLR
Sbjct: 283 QGFLDGVKKGQEQVLGDLSMILCDPFACNTLVLSIMRNLQELLSQDALPRDSPDLMLLLR 342
Query: 300 MLALGLSAWVMIDTQGGNILIEIFR---------SCF-------KLYDMVLQFLRTLFLR 343
ML+LG AW MID+Q +F+ +CF + D + + L
Sbjct: 343 MLSLGQGAWDMIDSQ-------VFKEPRLDKEVVTCFLPAMMSVVVDDNIFTVEQKLPSE 395
Query: 344 THNVHYWP--VPDAVQA-----------------------------------YVQESSVA 366
+ +P +PDA + +++E+ VA
Sbjct: 396 EKSSQAYPTLLPDAFYSVWLQGRSSAAVAVTPDPGPETGSGCNGSCAVSFFRFLRENRVA 455
Query: 367 CIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPF 406
C + +YY H A+ R++ L R+L L + +D AF D F
Sbjct: 456 CEMGLYYIFHIAKLRNKNALQRLLPALVDTYNDMAFGDIF 495
>gi|395506593|ref|XP_003757616.1| PREDICTED: negative elongation factor B [Sarcophilus harrisii]
Length = 523
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/315 (54%), Positives = 211/315 (66%), Gaps = 53/315 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKENILF + ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKENILFSNEVSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQKL MIG +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQKLTQMIGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL+I DI VDPCHKFTWCLDACIREK VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLDISDICMVDPCHKFTWCLDACIREKFVDNKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPRE+ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTIRHLQELVGQETLPRESPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQ 314
ML+LG AW MID+Q
Sbjct: 344 MLSLGQGAWDMIDSQ 358
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 24/31 (77%)
Query: 319 LIEIFRSCFKLYDMVLQFLRTLFLRTHNVHY 349
L ++ KLYDMVLQFLRTLFLRT NVHY
Sbjct: 204 LTQMIGKNVKLYDMVLQFLRTLFLRTRNVHY 234
>gi|198425385|ref|XP_002130034.1| PREDICTED: similar to cofactor of BRCA1 [Ciona intestinalis]
Length = 605
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 206/314 (65%), Gaps = 51/314 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSFP++++ L PV M +L++ + +KY+ VL +D+ LY +VKRQIW+ NQ+
Sbjct: 93 ILEKSFPVIKIDSLVPVSMCLLKHLPKVPEKYISVLTKDKSLYSACPIQVKRQIWQKNQT 152
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
+FGDEV PLL++YI+EKE +L D L FF +
Sbjct: 153 IFGDEVLPLLTRYIKEKEVVLLDGECLEGNNFFTS------------------------- 187
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S + R G VV+ L MIG +++LYDMVLQFLRT
Sbjct: 188 --------------------------SPKSRRQGHVVKTLTEMIGKNIRLYDMVLQFLRT 221
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFL+THNVHYC+LR+E+LM+LHDLE+ ++ +VDPC+KFTWCLDACIRE VD+KR+RELQ
Sbjct: 222 LFLKTHNVHYCSLRSEMLMSLHDLEVTEVCTVDPCYKFTWCLDACIREHYVDVKRARELQ 281
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFLD++++GHEQVLGDLSM LCDP+A+N + S MKI+H L E LPRE+T L+LL+RM
Sbjct: 282 GFLDNVRKGHEQVLGDLSMILCDPFAVNTMLWSVMKIIHELTVKETLPRESTELMLLIRM 341
Query: 301 LALGLSAWVMIDTQ 314
L LG SAW +I+ Q
Sbjct: 342 LKLGQSAWDIINKQ 355
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 25/31 (80%)
Query: 319 LIEIFRSCFKLYDMVLQFLRTLFLRTHNVHY 349
L E+ +LYDMVLQFLRTLFL+THNVHY
Sbjct: 201 LTEMIGKNIRLYDMVLQFLRTLFLKTHNVHY 231
>gi|441623899|ref|XP_003279885.2| PREDICTED: LOW QUALITY PROTEIN: negative elongation factor B
[Nomascus leucogenys]
Length = 928
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/315 (52%), Positives = 211/315 (66%), Gaps = 53/315 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 454 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 513
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P+PK
Sbjct: 514 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSPSPKT--------------------- 552
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 553 -------------------------------RRQGEVVQRLTQMVGKNVKLYDMVLQFLR 581
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ +I +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 582 TLFLRTRNVHYCTLRAELLMSLHDLDVGEICTVDPCHKFTWCLDACIRERFVDSKRAREL 641
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR
Sbjct: 642 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLR 701
Query: 300 MLALGLSAWVMIDTQ 314
+LALG AW MID+Q
Sbjct: 702 LLALGQGAWDMIDSQ 716
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 24/31 (77%)
Query: 319 LIEIFRSCFKLYDMVLQFLRTLFLRTHNVHY 349
L ++ KLYDMVLQFLRTLFLRT NVHY
Sbjct: 562 LTQMVGKNVKLYDMVLQFLRTLFLRTRNVHY 592
>gi|109109650|ref|XP_001087434.1| PREDICTED: negative elongation factor B isoform 2 [Macaca mulatta]
Length = 579
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 188/430 (43%), Positives = 250/430 (58%), Gaps = 77/430 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQRLTQMVGKNVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
TLFLRT NVHYCTLRAELLM+LHDL++ +I +VDPCHKFTWCLDACIRE+ VD KR+REL
Sbjct: 224 TLFLRTRNVHYCTLRAELLMSLHDLDVGEICTVDPCHKFTWCLDACIRERFVDSKRAREL 283
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR
Sbjct: 284 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLR 343
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPVPDAVQAY 359
+LALG AW MID+Q +F+ ++L+FL L R + P A
Sbjct: 344 LLALGQGAWDMIDSQ-------VFKEPKMELKLILRFLVALLPRLGSHPTHPPCPPPPAS 396
Query: 360 VQESSVA----------CIISMYYTLHTARSR-----DRVGLMRVLGVLATSES--DRAF 402
++ C L + R++ RVG ++ ++ E+ D AF
Sbjct: 397 SPAETLCFPPQNFQKPPCEHPQKQVLRSLRTKVPSEVGRVGGAGLMPAVSAVETFGDLAF 456
Query: 403 DDPFLHFLSS 412
D FLH L+
Sbjct: 457 GDIFLHLLTG 466
>gi|410043478|ref|XP_001136264.3| PREDICTED: negative elongation factor B [Pan troglodytes]
Length = 656
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 180/411 (43%), Positives = 239/411 (58%), Gaps = 83/411 (20%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 246 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 305
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 306 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 340
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQ+L M+G +VKLYDMVLQFLR
Sbjct: 341 ---------------------------SPKTRRQGEVVQRLTRMVGKNVKLYDMVLQFLR 373
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLE--IQDIISVDPCHKFTWCLDACIREKNVDIKRSR 237
TLFLRT NVHYCTLRAELLM + S P FTWCLDACIRE+ VD KR+R
Sbjct: 374 TLFLRTRNVHYCTLRAELLMXXXXSPSLFPGLWSFCP---FTWCLDACIRERFVDSKRAR 430
Query: 238 ELQGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLL 297
ELQGFLD +K+G EQVLGDLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LL
Sbjct: 431 ELQGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLL 490
Query: 298 LRMLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTL--FL---RTHNV----- 347
LR+LALG AW MID+Q +F+ +++ +FL L FL T NV
Sbjct: 491 LRLLALGQGAWDMIDSQ-------VFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLP 543
Query: 348 --HYWPV------PDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVL 390
PV P++ ++QE +AC + +YY LH + R++ L+R+L
Sbjct: 544 AEEKAPVSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLL 594
>gi|156351408|ref|XP_001622497.1| predicted protein [Nematostella vectensis]
gi|156209053|gb|EDO30397.1| predicted protein [Nematostella vectensis]
Length = 577
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/315 (46%), Positives = 195/315 (61%), Gaps = 51/315 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L++SFP + VK+LRPVV+A++++ I+D+ L + D +LY+D EVKRQIW +
Sbjct: 87 ILEQSFPFIHVKELRPVVVAVMKHLPKINDECLEHIANDAKLYEDCPIEVKRQIWSKHHH 146
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGD V PLL+QYI K +L + FF P + +
Sbjct: 147 LFGDAVGPLLNQYIEAKYTLLHSTEAHNSHSFFSVPSKTR-------------------- 186
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
R+ AI VQ LA MIG S+ LY++VLQFLRT
Sbjct: 187 ----------------RQHAI---------------VQGLAKMIGKSLSLYNLVLQFLRT 215
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLR + VHYCTLR+ELLMA+HDLE++DI VDPCHKFTWCLDACIREK+++ KR RELQ
Sbjct: 216 LFLRANEVHYCTLRSELLMAVHDLEVKDIKDVDPCHKFTWCLDACIREKSIEGKRVRELQ 275
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
GFL+ K G E+VLGD++M LCDP+AIN +A S +K+LH L N + LPR + + LLR+
Sbjct: 276 GFLEMAKNGEERVLGDIAMILCDPFAINTIAKSIIKLLHRLANTDTLPRTSEDITFLLRL 335
Query: 301 LALGLSAWVMIDTQG 315
L LG+SAW MI+ Q
Sbjct: 336 LNLGVSAWDMIEKQA 350
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 97 KEFKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKMPPDERESAI 141
+ FKE ++ ++ +KF+P +MSLMVD + LN K+P D+ E +
Sbjct: 349 QAFKEIPVNDELASKFLPFIMSLMVDSSLNTLNGKVPEDDIEEGL 393
>gi|52545519|emb|CAB43381.3| hypothetical protein [Homo sapiens]
Length = 398
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/284 (52%), Positives = 193/284 (67%), Gaps = 25/284 (8%)
Query: 147 SGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTLFLRTHNVHYCTLRAELLMALHDLEI 206
S + R GEVVQ+L M+G +VKLYDMVLQFLRTLFLRT NVHYCTLRAELLM+LHDL++
Sbjct: 9 SPKTRRQGEVVQRLTRMVGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAELLMSLHDLDV 68
Query: 207 QDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIKRGHEQVLGDLSMTLCDPYA 266
+I +VDPCHKFTWCLDACIRE+ VD KR+RELQGFLD +K+G EQVLGDLSM LCDP+A
Sbjct: 69 GEICTVDPCHKFTWCLDACIRERFVDSKRARELQGFLDGVKKGQEQVLGDLSMILCDPFA 128
Query: 267 INFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMIDTQGGNILIEIFRSC 326
IN LA S ++ L L+ E LPR++ L+LLLR+LALG AW MID+Q +F+
Sbjct: 129 INTLALSTVRHLQELVGQETLPRDSPDLLLLLRLLALGQGAWDMIDSQ-------VFKEP 181
Query: 327 FKLYDMVLQFLRTL--FL---RTHNVHY-----------WP--VPDAVQAYVQESSVACI 368
+++ +FL L FL T NV +P +P++ ++QE +AC
Sbjct: 182 KMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEKAPVSYPNTLPESFTKFLQEQRMACE 241
Query: 369 ISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSS 412
+ +YY LH + R++ L+R+L L + D AF D FLH L+
Sbjct: 242 VGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDIFLHLLTG 285
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 30/39 (76%)
Query: 99 FKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKMPPDER 137
FKEPK++ +++T+F+P LMS +VDD ++ K+P +E+
Sbjct: 178 FKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEK 216
>gi|345495124|ref|XP_001605692.2| PREDICTED: negative elongation factor B-like [Nasonia vitripennis]
Length = 465
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/258 (61%), Positives = 175/258 (67%), Gaps = 33/258 (12%)
Query: 182 FLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQG 241
FLRT NVHYCTLRAELLMA HDLE+QDIISVDPCHKFTWCLDACIREKNVDIKRSRELQG
Sbjct: 91 FLRTKNVHYCTLRAELLMAFHDLEVQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQG 150
Query: 242 FLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRML 301
FLDSIKRG EQVLGDLSMTLCDPYA+NFLA+S MKI +LIN E LPREN VLVLLLRML
Sbjct: 151 FLDSIKRGQEQVLGDLSMTLCDPYAVNFLASSVMKIALHLINGELLPRENAVLVLLLRML 210
Query: 302 ALGLSAWVMIDTQ-------GGNILIEIFRSCFKLYDMVLQFLRTLFLRTHN-------- 346
ALGLSAW MID+Q ++ + + L MV +R L R
Sbjct: 211 ALGLSAWQMIDSQDFKEPKLDSQVVTKFLPALMSL--MVDDQIRQLNCRLPPDERESAIA 268
Query: 347 --VHYWPVPDAVQAYVQESSVACIISMYYTLHT-------------ARSR-DRVGLMRVL 390
H P PDA QAY Q S VA ++SMYY LH +SR D GL+RVL
Sbjct: 269 IIEHSGPPPDACQAYAQLSGVAAVLSMYYALHVGGIGAGATCTAGQGKSRGDARGLVRVL 328
Query: 391 GVLATSESDRAFDDPFLH 408
L + RA++DPFLH
Sbjct: 329 ATLPNCQGQRAYEDPFLH 346
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 49/52 (94%)
Query: 97 KEFKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKMPPDERESAITIIEHSG 148
++FKEPKLDSQVVTKF+PALMSLMVDDQ+R LN ++PPDERESAI IIEHSG
Sbjct: 223 QDFKEPKLDSQVVTKFLPALMSLMVDDQIRQLNCRLPPDERESAIAIIEHSG 274
>gi|195447050|ref|XP_002071042.1| GK25347 [Drosophila willistoni]
gi|194167127|gb|EDW82028.1| GK25347 [Drosophila willistoni]
Length = 426
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 127/148 (85%), Positives = 139/148 (93%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+VRVK LRPVVMAILRNT HIDDKYLR+LVRDRELY DTDTEVKRQIW+DNQS
Sbjct: 102 LLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLRILVRDRELYADTDTEVKRQIWRDNQS 161
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGDEVSPLLSQYIREKE+ILFDH NL NLFF PTPK+FKEPKLDSQVVTKF+PALMSLM
Sbjct: 162 LFGDEVSPLLSQYIREKEHILFDHTNLNNLFFHPTPKDFKEPKLDSQVVTKFLPALMSLM 221
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSG 148
VDDQ R+L++K+PPDERESA+T IEHSG
Sbjct: 222 VDDQCRSLHAKLPPDERESALTTIEHSG 249
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 53/63 (84%)
Query: 348 HYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFL 407
H P PDAV+AY+QESSVA I++MYYTLHTAR +DRVG++RVL +L+ + DRA++DPFL
Sbjct: 247 HSGPAPDAVEAYIQESSVASILAMYYTLHTARLKDRVGVLRVLAILSACKDDRAYEDPFL 306
Query: 408 HFL 410
H L
Sbjct: 307 HSL 309
>gi|449674640|ref|XP_002167771.2| PREDICTED: negative elongation factor B-like [Hydra magnipapillata]
Length = 566
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 215/399 (53%), Gaps = 68/399 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
++ + + V LRPV+M L+ + + + ++ + ++Y D EVKR++W
Sbjct: 89 LIDHTIQFIHVDALRPVIMTALKKLKEVKPETIELISLNEKIYNDCPIEVKRKVWMKKHP 148
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LFGD V P+L++YI EK+++++ N + FF
Sbjct: 149 LFGDAVGPILNRYIIEKQSLIYSTENTKSQNFFSL------------------------- 183
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
S R R +V++L MIG+S+ LY++VLQFLRT
Sbjct: 184 --------------------------STRERRQKPIVKQLVEMIGTSIDLYNLVLQFLRT 217
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LFLRT +YC+LR+ELLMA HD +I++I VDPCHKFTWCLDACIR+K++D +R +ELQ
Sbjct: 218 LFLRTKEENYCSLRSELLMAFHDADIKEIHQVDPCHKFTWCLDACIRDKSIDTRRLKELQ 277
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
FLD+IK G E+V+GD++M LCDPYA N + S M++L+ LI + LPR + L+ L+R+
Sbjct: 278 TFLDTIKNGQEEVMGDIAMILCDPYATNTIIVSIMQVLNKLIAVDVLPRSSGDLMFLIRL 337
Query: 301 LALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL---------RTHNVHYWP 351
L L L AW MI Q F+ D+V +FL L N +
Sbjct: 338 LCLSLGAWDMIKAQN-------FKEESLNIDIVTKFLPLLMSIMMDCMGDESNENPNNIK 390
Query: 352 VPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVL 390
VPD + ++QES+ + +I YY L+ D+V ++ V+
Sbjct: 391 VPDNLFKFIQESTPSQLIVCYY-LNQVIQSDKVAILEVV 428
>gi|328785788|ref|XP_003250657.1| PREDICTED: negative elongation factor B-like [Apis mellifera]
Length = 355
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/243 (60%), Positives = 161/243 (66%), Gaps = 36/243 (14%)
Query: 199 MALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIKRGHEQVLGDLS 258
MALHDLE+QDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIKRG EQVLGDLS
Sbjct: 1 MALHDLEVQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIKRGQEQVLGDLS 60
Query: 259 MTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMIDTQGGNI 318
M LCDPYA+NFLA+SA+KI +LIN EALPREN VLVLLLRMLALGLSAW MID+Q
Sbjct: 61 MILCDPYAVNFLASSAIKIALHLINGEALPRENAVLVLLLRMLALGLSAWQMIDSQD--- 117
Query: 319 LIEIFRSCFKLYDMVLQFLRTLF-------LRTHNV---------------HYWPVPDAV 356
F+ +V +FL L +R N H P PDA
Sbjct: 118 ----FKEPKLDSQVVTKFLPALMSLMVDDQIRQLNCKLPPDERESAIAIIEHSGPPPDAC 173
Query: 357 QAYVQESSVACIISMYYTLH-------TARSRDRVGLMRVLGVLATSESDRAFDDPFLHF 409
QAY Q S VA ++SMYY LH D GLMRVL L ++ RAF+DPFLH
Sbjct: 174 QAYAQLSGVAAVLSMYYALHVGGGGGVGKGRGDARGLMRVLATLPNCQAQRAFEDPFLHT 233
Query: 410 LSS 412
L S
Sbjct: 234 LVS 236
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 97 KEFKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKMPPDERESAITIIEHSG 148
++FKEPKLDSQVVTKF+PALMSLMVDDQ+R LN K+PPDERESAI IIEHSG
Sbjct: 116 QDFKEPKLDSQVVTKFLPALMSLMVDDQIRQLNCKLPPDERESAIAIIEHSG 167
>gi|444521174|gb|ELV13115.1| Negative elongation factor B [Tupaia chinensis]
Length = 555
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 170/425 (40%), Positives = 229/425 (53%), Gaps = 91/425 (21%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K LR+++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLRLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE+ LF ++ + FF P
Sbjct: 156 LFGDEVSPLLKQYILEKESALFSTELSVLHNFFSP------------------------- 190
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
S + R GEVVQ+L M+G SVKLYDMVLQFLR
Sbjct: 191 ---------------------------SPKTRRQGEVVQRLTQMVGRSVKLYDMVLQFLR 223
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
T + T T RA L A+H + CIRE VD KR+REL
Sbjct: 224 T-GVGTWGPSALT-RA--LAAVHLV--------------------CIRELFVDSKRAREL 259
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QGFLD +K+G EQVLGDLSM LCDP+AIN L+ S ++ L L+ E LPR++ L+LLLR
Sbjct: 260 QGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTIRHLQELVGQETLPRDSPDLLLLLR 319
Query: 300 MLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNV-HYWPV------ 352
+LALG AW MID+Q + S + M++ F+ + T NV P
Sbjct: 320 LLALGQGAWDMIDSQVFKEPKMVRGSVTRFLPMLMSFVVDDY--TFNVDQKLPAEEKAPA 377
Query: 353 --PDAVQA---YVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFL 407
P+ +Q ++QE VAC + +YY LH + R+R L+R+L LA + D AF D FL
Sbjct: 378 VYPNTLQPLPRFLQEQRVACAVGLYYVLHVTKQRNRNALLRLLPALAETFGDLAFGDIFL 437
Query: 408 HFLSS 412
H L+
Sbjct: 438 HLLTG 442
>gi|340385232|ref|XP_003391114.1| PREDICTED: negative elongation factor B-like, partial [Amphimedon
queenslandica]
Length = 458
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 212/415 (51%), Gaps = 71/415 (17%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTH---IDDKYLRVLVRDRELYKDTDTEVKRQIWKD 57
+L K+F V ++ VVM +L + ID+KYL + ELY D VKRQIW+
Sbjct: 44 LLDKAFQYTSVPEICSVVMKMLETLSAQQPIDEKYLLEIAEKEELYNDCPIIVKRQIWQL 103
Query: 58 NQSLFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALM 117
N +FG+ VSPLL QYI EKE+ LF N++ FF P
Sbjct: 104 NPGVFGEAVSPLLDQYIAEKESQLF---NISEQSFFMQP--------------------- 139
Query: 118 SLMVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQF 177
V+A R+S+I +++L M+G+S+ LY+ + QF
Sbjct: 140 -------VKA--------RRQSSI---------------LKQLVEMLGTSLPLYNTLTQF 169
Query: 178 LRTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSR 237
LRTLFLRT HYCTLRA+++M LH+ + I+ D CHKF WCLDACIR VD K+ R
Sbjct: 170 LRTLFLRTRVGHYCTLRADIIMMLHEKD-NVIMDSDRCHKFAWCLDACIRSCTVDEKKLR 228
Query: 238 ELQGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLL 297
EL FLD+I G + VL D+SM L DP+ + ++ S + LH ++N LPRE++ L L
Sbjct: 229 ELYAFLDTIP-GGDDVLEDVSMLLRDPFILYTISRSVVLSLHKMMNESKLPRESSHLESL 287
Query: 298 LRMLALGLSAWVMIDTQ---GGNILIEIFRSCFKLYDMVLQFLRTLFLR------THNVH 348
LR+L +GL + ++T+ G + I+I K +L F+ LR +
Sbjct: 288 LRLLFIGLKSASYLETKSYSGDPLEIDII---IKFLPELLSFMTESSLRLIHSKLKQDYP 344
Query: 349 YWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFD 403
+ + + ++ ++ A ++ Y+L+ +D L +L +A+S ++ D
Sbjct: 345 TYTLSSSFIRHLTSTTGAMQLTTSYSLYLIDKKDFKTLSSLLPAIASSYTESETD 399
>gi|47205967|emb|CAF91735.1| unnamed protein product [Tetraodon nigroviridis]
Length = 801
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 155/487 (31%), Positives = 215/487 (44%), Gaps = 184/487 (37%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSFPLV++ ++PVVM +L++ + +K L++++ D+ELYK EVKRQIW+DNQ+
Sbjct: 63 LLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKIVMADKELYKVCAVEVKRQIWQDNQA 122
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LFGDEVSPLL QYI EKE LF ++ + FF P+P
Sbjct: 123 LFGDEVSPLLKQYIVEKEAALFSSDVSVLHSFFSPSP----------------------- 159
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
+ R GEVV KL MIG +VKLYDM
Sbjct: 160 -----------------------------KTRRQGEVVLKLTQMIGKNVKLYDM------ 184
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
FTWCLDACIREK VD KR+REL
Sbjct: 185 --------------------------------------FTWCLDACIREKFVDGKRAREL 206
Query: 240 QGFLD-----------------SIKRGHEQVLG---------DLSMTLCDPYAINFLATS 273
QGFLD S+ RG + G DLSM LCDP+A N L S
Sbjct: 207 QGFLDGGEEGTGAGSRVRKGGESLGRGGMRTRGWNGPFVRCRDLSMILCDPFACNTLVLS 266
Query: 274 AMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMIDTQGGNILIEIFR--------- 324
M+ L L++ +ALPR++ L+LLLRML+LG AW MID+ ++F+
Sbjct: 267 IMRNLQELLSQDALPRDSPDLMLLLRMLSLGQGAWDMIDS-------QVFKEPRLDKEVV 319
Query: 325 SCF-------KLYDMVLQFLRTLFLRTHNVHYWP--VPDAVQA----------------- 358
+CF + D + + L + +P +PDA +
Sbjct: 320 TCFLPAMMSVVVDDNIFTVEQKLPSEEKSSQAYPTLLPDAFYSVWLQGRSSAAVAVTPDP 379
Query: 359 -------------------YVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESD 399
+++E+ VAC + +YY H A+ R++ L R+L L + +D
Sbjct: 380 GPETGSGCNGSCAVSFFFRFLRENRVACEMGLYYIFHIAKLRNKNALQRLLPALVDTYND 439
Query: 400 RAFDDPF 406
AF D F
Sbjct: 440 MAFGDIF 446
>gi|195998830|ref|XP_002109283.1| hypothetical protein TRIADDRAFT_13686 [Trichoplax adhaerens]
gi|190587407|gb|EDV27449.1| hypothetical protein TRIADDRAFT_13686, partial [Trichoplax
adhaerens]
Length = 444
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 211/418 (50%), Gaps = 68/418 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L +FP + +K +RPV + I++ + YL +L +++L + EV+RQ+W++N
Sbjct: 28 LLAVTFPSIHIKSIRPVCIEIMKRLPSLPQNYLTLLEDNQDLLQILPIEVRRQVWQNNLK 87
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LF E++PL+ Y+R E+ +F SL
Sbjct: 88 LFALEINPLIDTYLRSTEDFMF-----------------------------------SLN 112
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
D Q N K P R R EV+QK+ +IG SVKLY+ LQ LRT
Sbjct: 113 FDKQQHFFN-KAP---------------RKRRQNEVLQKIVELIGRSVKLYNTTLQILRT 156
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
L+ R HYCTLR E+LM LHD ++++I+S+DPC+KF WCLDAC+R+ VD KR EL
Sbjct: 157 LYFRNAIEHYCTLRLEILMKLHDNDVREILSLDPCYKFVWCLDACLRDGLVDSKRCNELI 216
Query: 241 GFL-DSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
+ ++ K +Q+LGD ++ L DP+ I+ L + + + L + E LPR+ +L LLR
Sbjct: 217 ALMEEATKESGKQILGDFAIILADPFVIHALTGTIFRSIQLLYDQELLPRDVPLLHSLLR 276
Query: 300 MLALGLSAWVMIDTQG-GNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPVP----- 353
+L+LGL+A MI Q I I+ +VL+F+ T+ L H++ +
Sbjct: 277 LLSLGLNASQMIHRQDFAEIDIDNV--------IVLRFIPTIMLLIHSLKNNGICPPNID 328
Query: 354 -DAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATS-ESDRAFDDPFLHF 409
D +Y+ E+ +A I+ LH + L +L +A + + D+ FLH
Sbjct: 329 LDFFSSYIHENPIARRIACELILHLCNKHNLSDLSLLLPKVAPAFRTPDISDNIFLHL 386
>gi|440797507|gb|ELR18593.1| Cofactor of BRCA1 (COBRA1) [Acanthamoeba castellanii str. Neff]
Length = 603
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 215/410 (52%), Gaps = 34/410 (8%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+ +FP + +++LR + +AIL+ +I YLR + E+Y +V+RQIW+ ++
Sbjct: 32 LLETTFPYIGLEELRDIPLAILKRHPNIPATYLRRIGAKPEIYAICPIQVQRQIWQIDEE 91
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LF V PLL+QYI + + + L + P+ +E Q + + V + L
Sbjct: 92 LFKGRVFPLLNQYINTELDAPINEM-LISTEDLVAPRRRREHNYILQQLVQIVGKSVGLY 150
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
++V+ + E+ T EH +RI L ++ +L F RT
Sbjct: 151 --NKVKQ--------QPEAGSTAAEHLA-LSRIPPDSYVLNLVVA--------MLHFFRT 191
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
LF+ ++H+C+LR+ELLMALHD + DI +DPCHKF WC+DAC+R+ V+ +R +E+Q
Sbjct: 192 LFVTNRDLHFCSLRSELLMALHDRGVTDIYDIDPCHKFAWCMDACVRDHIVEERRIKEMQ 251
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
+ D+I G + VLGDL+M + DP N L T+ +L+ +++ E LP EN L + ++
Sbjct: 252 TYFDAIPAG-DPVLGDLAMIINDPNCTNTLLTNIFNLLNEIVDQEKLPSENANLKYIAQL 310
Query: 301 LALGLSAWVMIDTQGGNIL---IEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPVPDAVQ 357
L+LGL A +I+ Q I E+ + F + M + L + PD +
Sbjct: 311 LSLGLLARDIIEHQNFEIPEADTEVLHTFFPI--MARKMLEDMVAEEDEPASELDPD-FE 367
Query: 358 AYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAF--DDP 405
A + +++A +++YY L +++D + +VL + DRA D+P
Sbjct: 368 AIFKSNALARKVALYYVLTRVQAKDADSVKQVLDKI-----DRAILADEP 412
>gi|393910965|gb|EJD76108.1| negative elongation factor B [Loa loa]
Length = 667
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 205/432 (47%), Gaps = 76/432 (17%)
Query: 2 LKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSL 61
L+KSF L RV +RP V+ L+ D+YL+V+V DRE Y V++QIW N SL
Sbjct: 106 LEKSFKLYRVPSIRPFVLETLKQLPKAPDRYLKVIVTDREFYDSCAVTVRQQIWLKNDSL 165
Query: 62 FGDEVSPLLSQYIREKENILFD-HHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
+ D + P++ YI EK+ ++ + TN F T K ++ P ++ LM
Sbjct: 166 YMDAILPVIDSYIDEKQKVMQTVDQSPTNYFTCETTKSRRQ-----------WPQILELM 214
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
M+G LY + +R
Sbjct: 215 A-----------------------------------------MVGQQEPLYRRLNNVIRE 233
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
FL++ + YC+LR EL+M+ HDL I+ +I DPCH WCLDAC+R+K++D +++ +L+
Sbjct: 234 RFLKSADATYCSLRMELVMSAHDLNIEPVIRSDPCHDLAWCLDACVRDKHLDAQQTNKLK 293
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILH--YLINNEALPRENTVLVLLL 298
L+S K+ +V+GDL+M D + I+FL + A+K+L L LPRE L LLL
Sbjct: 294 NILESTKKTKTEVIGDLAMIAGDAHVIHFLCSMAVKVLRDSALHATGQLPRELVPLQLLL 353
Query: 299 RMLALGLSAWVMIDTQGGNILIEI-------FRSCFKLYDMVLQFLRTLFLRTHN--VHY 349
R+L+ G SA ++ T IL + F + F +V +R R + +
Sbjct: 354 RLLSFGASAHNVLSTNDVTILQNVDALVFTKFLASFTAL-IVEDVIRYELNRAPDEIIDE 412
Query: 350 WPVPDAVQAYVQE------SSVAC-IISMYYTLHTARSRDRV----GLMRVLGVLATSES 398
P D + +E + V C ++ ++Y L S+ RV G+MR L L +
Sbjct: 413 NPTSDFLSDPSEEMLSFLKTDVTCALLWIHYILDVLPSKRRVSDLPGIMRYLKALPRLKY 472
Query: 399 DRAFDDPFLHFL 410
A+ DP++H +
Sbjct: 473 KVAYCDPWIHLV 484
>gi|402591939|gb|EJW85868.1| hypothetical protein WUBG_03221 [Wuchereria bancrofti]
Length = 565
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 205/432 (47%), Gaps = 76/432 (17%)
Query: 2 LKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSL 61
L+KSF L RV +RP V+ L+ D+YL+V+V DRE Y V++QIW N SL
Sbjct: 57 LEKSFKLYRVPSIRPFVLETLKQLPKAPDRYLKVIVTDREFYDSCAVTVRQQIWLKNDSL 116
Query: 62 FGDEVSPLLSQYIREKENILFD-HHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
+ D + P++ YI EK+ ++ + TN F T K ++ P ++ LM
Sbjct: 117 YMDAILPVIDSYIDEKQKVMQTVDQSPTNYFTCETTKSRRQ-----------WPQILELM 165
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
M+G LY + +R
Sbjct: 166 T-----------------------------------------MVGHQEPLYRRLNNVIRE 184
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
FL++ + YC+LR EL+M+ HDL I+ +I DPCH WCLDAC+R+K++D +++ +L+
Sbjct: 185 RFLKSADAIYCSLRMELVMSAHDLNIESVIRSDPCHDLAWCLDACVRDKHLDAQQTIKLK 244
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILH--YLINNEALPRENTVLVLLL 298
L+S K+ +V+GDL+M D + I+FL + A+K+L L LPRE L LLL
Sbjct: 245 NILESTKKTKAEVIGDLAMIAGDAHVIHFLCSMAIKVLRDSALHATGQLPRELVPLQLLL 304
Query: 299 RMLALGLSAWVMIDTQGGNILIEI-------FRSCFKLYDMVLQFLRTLFLRTHN--VHY 349
R+L+ G SA ++ T L + F + F + +V +R R + +
Sbjct: 305 RLLSFGASAHSVLSTNDMTALQNVDAVVFTKFLASFTTF-IVEDVIRYELSRAPDEIIDE 363
Query: 350 WPVPDAVQAYVQE------SSVAC-IISMYYTLHTARSRDRV----GLMRVLGVLATSES 398
P D + +E + V C ++ ++Y L S+ RV G+MR L L +
Sbjct: 364 NPASDFLSDPSEEMLSFLKTDVTCALLWIHYILDVLSSKRRVSDLPGIMRYLKALPRLKY 423
Query: 399 DRAFDDPFLHFL 410
+F DP++H +
Sbjct: 424 KVSFCDPWIHLV 435
>gi|312071242|ref|XP_003138518.1| hypothetical protein LOAG_02933 [Loa loa]
Length = 360
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 55/306 (17%)
Query: 2 LKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSL 61
L+KSF L RV +RP V+ L+ D+YL+V+V DRE Y V++QIW N SL
Sbjct: 106 LEKSFKLYRVPSIRPFVLETLKQLPKAPDRYLKVIVTDREFYDSCAVTVRQQIWLKNDSL 165
Query: 62 FGDEVSPLLSQYIREKENILFD-HHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
+ D + P++ YI EK+ ++ + TN F T K ++ P ++ LM
Sbjct: 166 YMDAILPVIDSYIDEKQKVMQTVDQSPTNYFTCETTKSRRQ-----------WPQILELM 214
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
M+G LY + +R
Sbjct: 215 A-----------------------------------------MVGQQEPLYRRLNNVIRE 233
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
FL++ + YC+LR EL+M+ HDL I+ +I DPCH WCLDAC+R+K++D +++ +L+
Sbjct: 234 RFLKSADATYCSLRMELVMSAHDLNIEPVIRSDPCHDLAWCLDACVRDKHLDAQQTNKLK 293
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILH--YLINNEALPRENTVLVLLL 298
L+S K+ +V+GDL+M D + I+FL + A+K+L L LPRE L LLL
Sbjct: 294 NILESTKKTKTEVIGDLAMIAGDAHVIHFLCSMAVKVLRDSALHATGQLPRELVPLQLLL 353
Query: 299 RMLALG 304
R G
Sbjct: 354 RFRLSG 359
>gi|431899055|gb|ELK07425.1| Negative elongation factor B [Pteropus alecto]
Length = 518
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 127/208 (61%), Gaps = 25/208 (12%)
Query: 217 KFTWCLDACIREKNVDIKRSRELQGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMK 276
+FTWCLDACIRE+ VD KR+RELQGFLD +KRG EQVLGDLSM LCDP+AIN L+ SA++
Sbjct: 199 EFTWCLDACIRERFVDSKRARELQGFLDGVKRGQEQVLGDLSMILCDPFAINTLSLSAVR 258
Query: 277 ILHYLINNEALPRENTVLVLLLRMLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQF 336
L L+ E LPR++ L+LLLR+LALG AW MID+Q +F+ +V +F
Sbjct: 259 HLQELVGQETLPRDSPDLLLLLRLLALGQGAWDMIDSQ-------VFKEPKMEVGLVTRF 311
Query: 337 LRTLFLRTHNVHYWPV------------------PDAVQAYVQESSVACIISMYYTLHTA 378
L TL + H + V P++ ++QE +AC + +YY LH A
Sbjct: 312 LPTLMSFVVDDHAFNVDQKLPAEERAPVTYPSTLPESFTKFLQEQRMACEVGLYYVLHVA 371
Query: 379 RSRDRVGLMRVLGVLATSESDRAFDDPF 406
+ R++ L+R+L L + D AF D F
Sbjct: 372 KQRNKNALLRLLPGLVETFGDLAFGDIF 399
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 83/118 (70%), Gaps = 5/118 (4%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 96 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 155
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPK----LDSQVVTKFV 113
LFGDEVSPLL QYI EKE LF ++ + FF P+PK ++ + LD+ + +FV
Sbjct: 156 LFGDEVSPLLKQYILEKEGALFSAELSVLHNFFSPSPKARRQGEFTWCLDACIRERFV 213
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 99 FKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKMPPDER 137
FKEPK++ +VT+F+P LMS +VDD ++ K+P +ER
Sbjct: 298 FKEPKMEVGLVTRFLPTLMSFVVDDHAFNVDQKLPAEER 336
>gi|330791263|ref|XP_003283713.1| hypothetical protein DICPUDRAFT_52489 [Dictyostelium purpureum]
gi|325086336|gb|EGC39727.1| hypothetical protein DICPUDRAFT_52489 [Dictyostelium purpureum]
Length = 757
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 43/312 (13%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRN-TTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQ 59
+L+ SF + ++L+ + M ++R T + +L L ELY+ EVKRQIW +
Sbjct: 89 LLETSFAYISFEELQEIPMNVMRRLTPEVPTAFLLKLSESEELYEQCPIEVKRQIWLVSP 148
Query: 60 SLFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LF D+V PL+ QYI E N++ D + ++ P F
Sbjct: 149 QLFKDKVVPLIHQYI-EDSNLIQDMNEQLSVSSSSDPVLF-------------------- 187
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLR 179
A++ +P RE+ IT+ Q++A + G +LY M L+ L+
Sbjct: 188 -------AVSHTLPAKRRENNITL--------------QEIADLFGKIPELYQMFLEHLK 226
Query: 180 TLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
+F T N C LRAE+LMA+HD I +I D H WCLDACIR+ N+D +R +E+
Sbjct: 227 KIFADTGNYLLCNLRAEVLMAIHDRSINEIYDTDGSHNVAWCLDACIRDNNLDSRRVKEI 286
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
Q L+++ + VLGD++M +P AIN + + + L ++ + +P+++ + L
Sbjct: 287 QTSLNAVSNQNSSVLGDVAMVFGNPVAINCIVKNILIQLKEVVKRKQIPKDDESIKFLTY 346
Query: 300 MLALGLSAWVMI 311
+L LGL A MI
Sbjct: 347 LLVLGLKAHKMI 358
>gi|324517087|gb|ADY46723.1| Negative elongation factor B, partial [Ascaris suum]
Length = 401
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 165/319 (51%), Gaps = 53/319 (16%)
Query: 2 LKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSL 61
L+KSF L RV ++RPVV+ L+ + D+YL+V+V D+E Y V++QIW N L
Sbjct: 108 LEKSFKLYRVPKIRPVVLETLKQLPKVPDRYLKVIVADKEFYDSCAVSVRQQIWLKNDRL 167
Query: 62 FGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLMV 121
+ D + P ++ +V A +M
Sbjct: 168 YLDAICP---------------------------------------IIDSYVAAKTKIM- 187
Query: 122 DDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTL 181
M D+ + E + + R +Q L M+G LY+ ++ +R
Sbjct: 188 ----------MSVDQTPTNFFTCE-TTKARRQWPQIQDLISMVGDRESLYERLIDVIRER 236
Query: 182 FLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQG 241
F++T +V+YC+LR EL+MA HD + II +D CH F WCLDAC+R+K++D +++ +L+
Sbjct: 237 FIKTADVNYCSLRMELIMAAHDANLDSIIKMDVCHDFAWCLDACVRDKHLDAQQTTKLKN 296
Query: 242 FLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILH-YLINNEA-LPRENTVLVLLLR 299
L+S K+ +V+GD++M D + ++FL++ ++K+L IN LPRE L LLLR
Sbjct: 297 ILESAKKLPTEVVGDMAMIAADAHVVHFLSSMSVKVLRDTAINCSGHLPRELISLHLLLR 356
Query: 300 MLALGLSAWVMIDTQGGNI 318
+L LG SA ++ T+ ++
Sbjct: 357 LLTLGASAHHVLSTKDASM 375
>gi|426225945|ref|XP_004007118.1| PREDICTED: negative elongation factor B [Ovis aries]
Length = 583
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 133/407 (32%), Positives = 199/407 (48%), Gaps = 81/407 (19%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+KSF LV++ L+PVVM ++++ + +K L++++ D+ELY+ EVKRQIW+DNQ+
Sbjct: 126 LLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQA 185
Query: 61 LFGDEVSPLLSQYIREKENILFDHH-NLTNLFFFPTPKEFKEPK-LDSQVVTKFVPALMS 118
LFGDEVSPLL QYI EKE+ LF ++ + FF P+PK ++ + L + + AL
Sbjct: 186 LFGDEVSPLLKQYIVEKESALFSTELSVLHNFFSPSPKTRRQGEGLSVRSLRASRTAL-- 243
Query: 119 LMVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFL 178
L++ L S + ++E + + + H + L DM L
Sbjct: 244 LLLGSASPLLQSP------RGELCVLEQGFSHCPVLTWTRPVPH---TERVLGDMRWGSL 294
Query: 179 RTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPC--HKFTWCLDACIREKNVDIKRS 236
L L+A+L S DP +FTWCLDACIRE+ VD KR+
Sbjct: 295 AQPKLERSGSGESCLQAQLW-----------PSPDPAFSPQFTWCLDACIRERFVDSKRA 343
Query: 237 RELQGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSA--MKILHYLINNEALPRENTVL 294
RELQG L + A +K L L+ E LPR++ L
Sbjct: 344 RELQG----------------------------LQSEAWLVKHLQELVGQEVLPRDSPDL 375
Query: 295 VLLLRMLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFL-----RTHNV-- 347
+LLLR+LALG AW MID+Q +F+ ++V +FL L T NV
Sbjct: 376 LLLLRLLALGQGAWDMIDSQ-------VFKEPKMEVELVTRFLPMLMSFVVDDHTFNVDQ 428
Query: 348 -----HYWPV------PDAVQAYVQESSVACIISMYYTLHTARSRDR 383
PV P++ ++QE +AC + +YY LH + R++
Sbjct: 429 KLPAEEKAPVTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNK 475
>gi|170589077|ref|XP_001899300.1| Negative elongation factor B homolog [Brugia malayi]
gi|158593513|gb|EDP32108.1| Negative elongation factor B homolog, putative [Brugia malayi]
Length = 610
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 200/432 (46%), Gaps = 75/432 (17%)
Query: 2 LKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSL 61
L+KSF L RV +RP V+ L+ D+YL+V+V DRE Y V++QIW N
Sbjct: 106 LEKSFKLYRVPSIRPFVLETLKQLPKAPDRYLKVIVTDREFYDSCAVTVRQQIWLKN--- 162
Query: 62 FGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLMV 121
DS + +P + S +
Sbjct: 163 -------------------------------------------DSLYIDAILPVIDS-YI 178
Query: 122 DDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTL 181
D++ + + + D+ + E + + ++++ L M+G LY + +R
Sbjct: 179 DEKQKVMQT---VDQSPTNYFTCETTKSRRQWSQILE-LMTMVGHQEPLYRRLNNVIRER 234
Query: 182 FLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQG 241
FL++ + YC+LR EL+M+ HDL I+ +I DPCH WCLDAC+R+K++D +++ +L+
Sbjct: 235 FLKSADAIYCSLRMELVMSAHDLNIESVIRSDPCHDLAWCLDACVRDKHLDAQQTIKLKN 294
Query: 242 FLDSIKRGH-EQVLGDLSMTLCDPYAINFLATSAMKILH--YLINNEALPRENTVLVLLL 298
L+S K+ E V+GDL+M D + I+FL + A+K+L L LPRE L LLL
Sbjct: 295 ILESTKKTKAEVVIGDLAMIAGDAHVIHFLCSMAIKVLRDSALHATGQLPRELVPLQLLL 354
Query: 299 RMLALGLSAWVMIDTQGGNILIEI-------FRSCFKLYDMVLQFLRTLFLRTHN--VHY 349
R+L+ G SA ++ T L + F + F + +V +R R + +
Sbjct: 355 RLLSFGASAHSVLSTNDITALQNVDAVVFTKFLASFTTF-IVEDVIRYELSRAPDEIIDE 413
Query: 350 WPVPDAVQ-------AYVQESSVACIISMYYTLHTARSRDRV----GLMRVLGVLATSES 398
P D + +++ ++ ++Y L S+ RV G+MR L L +
Sbjct: 414 NPASDFLSDPSEEMLGFLKTDMTCALLWVHYILDVLSSKRRVSDLPGIMRYLKALPRLKY 473
Query: 399 DRAFDDPFLHFL 410
+F DP++H +
Sbjct: 474 KVSFCDPWIHLV 485
>gi|328865240|gb|EGG13626.1| hypothetical protein DFA_11387 [Dictyostelium fasciculatum]
Length = 757
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 155/319 (48%), Gaps = 54/319 (16%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L +SFP + +L+ + M +++ + ++L+ L ELY+ EVKRQIW N++
Sbjct: 80 LLDQSFPYISFDELKGIPMNVMKLMPEVPYRFLKKLSETPELYEQCPIEVKRQIWLINET 139
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LF +++ PL+ QY+ + P F E L ++
Sbjct: 140 LFREKLLPLIMQYVDD-------------------PYLFHE--------------LNEMI 166
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
V+ V +P RE+ +++++A +IG S+KLY+ + F+R
Sbjct: 167 VETHV------LPSKRREN--------------NTILKEIASLIGKSLKLYNGAISFIRQ 206
Query: 181 LFLRTHNVH-YCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSREL 239
LF NV CTLRA+LLM HD + +I D H WC+DAC+RE VD++R +E+
Sbjct: 207 LFTELENVAALCTLRADLLMLFHDNGVSEIYDHDRAHSIAWCVDACMRENIVDLRRVKEI 266
Query: 240 QGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLR 299
QG+ I VL D++M +P+A++ L + + L ++ + +P+E+ + +
Sbjct: 267 QGYFQEIGNHGGVVLADIAMVFANPFALHCLLRNVLMQLTEVVRRKQVPKEDENIKYITF 326
Query: 300 MLALGLSAWVMIDTQGGNI 318
++ L + M+ Q I
Sbjct: 327 LMTLATRSHEMVREQKYKI 345
>gi|320168143|gb|EFW45042.1| negative elongation factor B [Capsaspora owczarzaki ATCC 30864]
Length = 605
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 4/203 (1%)
Query: 116 LMSLMVDDQVRALNSKMPPDERESAITIIEHSGRFN---RIGEVVQKLAHMIGSSVKLYD 172
L SL V Q+ N+K+ DE + R R V ++A ++ S+ LY
Sbjct: 144 LCSLSVKRQIWMSNNKLFEDELDPIFNDYVEDKRLAVSPRELTAVNRIAQLVDKSIILYR 203
Query: 173 MVLQFLRTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVD 232
L +R+ F+++HN YC LRAELLMALHD I ++ +DPCH+F WC DACIR+ VD
Sbjct: 204 YALTLIRSRFIKSHNARYCMLRAELLMALHDAGIAELFHIDPCHEFAWCWDACIRDAKVD 263
Query: 233 IKRSRELQGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENT 292
+ ++ Q S+ + +LG+L+M L DPYA + + + L + E LPR+
Sbjct: 264 QLQIKKSQSCF-SVLVPNSPILGELAMILNDPYATGTILKAIIDCLKTSVETETLPRDEP 322
Query: 293 VLVLLLRMLALGLSAWVMIDTQG 315
LV LL +L +G SA ++ TQ
Sbjct: 323 RLVYLLHLLQIGQSAHAILQTQS 345
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+++FP ++V +++PVV A+L + I Y+ L D LYK VKRQIW N
Sbjct: 100 LLERTFPFIQVPEIQPVVFAVLGLHSGIPPAYVARLAADDTLYKLCSLSVKRQIWMSNNK 159
Query: 61 LFGDEVSPLLSQYIREK 77
LF DE+ P+ + Y+ +K
Sbjct: 160 LFEDELDPIFNDYVEDK 176
>gi|66809827|ref|XP_638637.1| hypothetical protein DDB_G0284195 [Dictyostelium discoideum AX4]
gi|60467253|gb|EAL65286.1| hypothetical protein DDB_G0284195 [Dictyostelium discoideum AX4]
Length = 854
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 155/314 (49%), Gaps = 45/314 (14%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRN-TTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQ 59
+L+++FP + ++L+ + M +++ T + +L L ELY+ EVKRQIW N+
Sbjct: 89 LLEQTFPYIGFEELQEIPMNVMKRLTPEVPVAFLLKLAEAEELYEQCPIEVKRQIWIVNE 148
Query: 60 SLFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSL 119
LF +++ PL++QYI E+ +F ++ Q++ L S
Sbjct: 149 ELFKEKIKPLINQYI---EDPIFIQD------------------MNEQLL------LSSS 181
Query: 120 MVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGS-SVKLYDMVLQFL 178
D + A+ S +P RE+ V+Q++ + G+ S LY M + +
Sbjct: 182 TTVDPLFAV-SHLPAKRREN--------------NSVLQEMVELFGTKSPDLYQMFINQI 226
Query: 179 RTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRE 238
+ F + N C LRAE+LMA+HD I +I D H WCLDACIR+ +D +R +E
Sbjct: 227 KRSFADSGNYLLCNLRAEILMAIHDKSIPEIYDTDASHNIAWCLDACIRDNTLDARRIKE 286
Query: 239 LQGFL-DSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLL 297
+Q L S+ + LGD +M +P A+N + + + L ++ + +P+++ + L
Sbjct: 287 IQTNLSSSVHHQNSSTLGDTAMVFANPIAVNCIVRNILIQLKEVVKRKQIPKDDESIKFL 346
Query: 298 LRMLALGLSAWVMI 311
+L L L + MI
Sbjct: 347 TYLLVLALKSHEMI 360
>gi|313226890|emb|CBY22035.1| unnamed protein product [Oikopleura dioica]
Length = 376
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 140/313 (44%), Gaps = 57/313 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L K+FPL L+P VM +L I L ++ D LY++ +V+R IW
Sbjct: 95 ILDKAFPLASDPLLQPFVMRMLSKLESIPQDKLEKIMADPVLYQNAPIDVRRHIWLSKPD 154
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LF DEV L+ Q++ + E H ++N V P L
Sbjct: 155 LFRDEVQELVKQFVDDVE------HQVSNF------------------VVDSCPVL---- 186
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
K P ++R + ++++K+ M + LYD + ++T
Sbjct: 187 ----------KNPREKRANC--------------KILKKIVGMTSGNKDLYDNAVLAIKT 222
Query: 181 LFLRTH---NVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSR 237
F T +LR+ LLMALHD E +DI+ D +KF WC+DACIR +D K+ R
Sbjct: 223 AFTTTQLHAQPFVASLRSGLLMALHDSEFKDILRRDEVYKFAWCMDACIRANAIDEKQRR 282
Query: 238 ELQGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLL 297
EL L+ IK+ + + D ++ L DP +N + L ++ + P+ + + L
Sbjct: 283 ELTTALNGIKKS--ETIIDAALILFDPSCVNLILLELETELRQILKVQGFPKGSEKIDFL 340
Query: 298 LRMLALGLSAWVM 310
+RML +G SA M
Sbjct: 341 MRMLRIGTSAPEM 353
>gi|313220434|emb|CBY31287.1| unnamed protein product [Oikopleura dioica]
Length = 376
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 141/313 (45%), Gaps = 57/313 (18%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L K+FPL L+P VM +L I L ++ D LY++ +V+R IW
Sbjct: 95 ILDKAFPLASDPLLQPFVMRMLSKLESIPQDKLEKIMADPVLYQNAPIDVRRHIWLSKPD 154
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
LF DEV L+ Q++ + E H ++N V P L
Sbjct: 155 LFRDEVQELVKQFLDDVE------HQVSNF------------------VVDSCPVL---- 186
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
K P ++R + ++++K+ M + LYD + ++T
Sbjct: 187 ----------KNPREKRANC--------------KILKKIVGMTSGNKDLYDNAVLAIKT 222
Query: 181 LFLRTH---NVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSR 237
F T +LR+ LLMALHD E +DI+ D +KF WC+DACIR +D K+ R
Sbjct: 223 AFTTTQLHAQPFVASLRSGLLMALHDSEFKDILRRDEVYKFAWCMDACIRANAIDEKQRR 282
Query: 238 ELQGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLL 297
EL L+ IK+ + + D ++ L DP +N + K L ++ + P+ + + L
Sbjct: 283 ELTTALNGIKKS--ETIIDAALILFDPSCVNLILLELEKELRQILKVQGFPKGSEKIDFL 340
Query: 298 LRMLALGLSAWVM 310
+RML +G SA M
Sbjct: 341 MRMLRIGTSAPEM 353
>gi|339243741|ref|XP_003377796.1| conserved hypothetical protein [Trichinella spiralis]
gi|316973358|gb|EFV56959.1| conserved hypothetical protein [Trichinella spiralis]
Length = 558
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 149/332 (44%), Gaps = 60/332 (18%)
Query: 2 LKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSL 61
L + LV + +R +++ ++ + L+ + D LY D ++KR IW+ + +
Sbjct: 97 LSTYYELVDLPTMRSLIIDVMMIAPRVPVCALQKISSDDNLYNMVDLQIKRLIWELREDI 156
Query: 62 FGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLMV 121
F E+ +L+ Y+ N + +F+E D ++ +L+ L
Sbjct: 157 FYREMKIMLTDYM--------------NWWL----TQFREADTD-----RYCKSLLDL-- 191
Query: 122 DDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTL 181
SGR R EV+QK+ M+G LYD +L ++R
Sbjct: 192 -------------------------SGR--RKAEVIQKIVCMVGRKTVLYDRLLSYIRMA 224
Query: 182 FLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQG 241
FL T +V +C R +LL++ H+ +I+DI + DPC+KF L+A ++ +D + + +LQ
Sbjct: 225 FLHTKHVVFCNFRHDLLLSFHEADIKDIANSDPCYKFMLALEAFFKDP-LDNRNTEQLQQ 283
Query: 242 FLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRML 301
+ GDLS+ L +I L T+ +K+ ++ + LPRE +L R+L
Sbjct: 284 IVAFYFNSDNPAQGDLSIILNSYSSIQALCTTTLKLAKDCVSKKILPRECKLLTFAFRLL 343
Query: 302 ALGLSAWVM------IDTQGGNILIEIFRSCF 327
+GL W ID Q NI + CF
Sbjct: 344 KIGLGGWKFNREERSID-QKCNIAENDYLQCF 374
>gi|340385850|ref|XP_003391421.1| PREDICTED: negative elongation factor B-like [Amphimedon
queenslandica]
Length = 457
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 101/208 (48%), Gaps = 57/208 (27%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTH---IDDKYLRVLVRDRELYKDTDTEVKRQIWKD 57
+L K+F V ++ VVM +L + ID+KYL + ELY D VKRQIW+
Sbjct: 87 LLDKAFQYTSVPEICSVVMKMLETLSAQQPIDEKYLLEIAEKEELYNDCPIIVKRQIWQL 146
Query: 58 NQSLFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALM 117
N +FG+ VSPLL QYI EKE+ LF N++ FF P
Sbjct: 147 NPGVFGEAVSPLLDQYIAEKESQLF---NISEQSFFMQP--------------------- 182
Query: 118 SLMVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQF 177
V+A R ++++L M+G+S+ LY+ + QF
Sbjct: 183 -------VKA-----------------------RRQSSILKQLVEMLGTSLPLYNTLTQF 212
Query: 178 LRTLFLRTHNVHYCTLRAELLMALHDLE 205
LRTLFLRT HYCTLRA+++M LH+ E
Sbjct: 213 LRTLFLRTRVGHYCTLRADIIMMLHEKE 240
>gi|308804251|ref|XP_003079438.1| unnamed protein product [Ostreococcus tauri]
gi|116057893|emb|CAL54096.1| unnamed protein product [Ostreococcus tauri]
Length = 771
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 160/403 (39%), Gaps = 91/403 (22%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L SFP + +++L+ V +A+ + + + YL+ + RD +++ EV+RQ W +
Sbjct: 115 LLDASFPYIGIEELKAVPLAVFAHMSPVPSSYLKQVSRDLVIFRQLPVEVQRQCWALDWQ 174
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
L SP + Y E I + N TP
Sbjct: 175 LLRRHASPSMMAYGEETATI----EAMINQNIELTP------------------------ 206
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRI-----GEVVQKLAHMIGSSVKLYDMVL 175
+RA P E A + SG NR E VQ+L +IG + +LY ++
Sbjct: 207 ----LRADEDWSP--REEGAKKKGDVSGTMNRQKIRKESESVQRLMRIIGKTPRLYIEIV 260
Query: 176 QFLRTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKR 235
+ R F + + C+LR++LLMA HD ++ S+D CH+ W +D CIR++ +D +R
Sbjct: 261 RLCRAHFANSGDDAACSLRSQLLMAFHDAGEMEMCSMDKCHRLAWLMDTCIRDRYLDGRR 320
Query: 236 SRELQGFLD-------------------------------------------SIKRGH-- 250
+E+ L+ SI R H
Sbjct: 321 LKEMGTILETAVEKANKMGGRKPPKPQGPTRFRLVGLGVAPKKDGNESDDGGSISRVHDA 380
Query: 251 -------EQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLAL 303
EQV GD+ M L DP ++ L ++ L +I E +P + L L + + L
Sbjct: 381 HEKDEKFEQVPGDMGMILADPPVLHLLLHETVRTLEGVIEAERVPAKERRLDDLTKFICL 440
Query: 304 GLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHN 346
L++ + + I C K + ++ + ++ LR +
Sbjct: 441 ALTSQACLMEKVNYIPATPKEICVKFFPLLSDLMLSVMLRESD 483
>gi|255077153|ref|XP_002502227.1| predicted protein [Micromonas sp. RCC299]
gi|226517492|gb|ACO63485.1| predicted protein [Micromonas sp. RCC299]
Length = 964
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 26/250 (10%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L SFP + +++L+ + +A L + + YL+ + R+ EL++ EV+RQ W+
Sbjct: 156 LLDASFPYIGIEELKAIPLAALEHLKPVPSSYLKQISRNVELFRQLPVEVQRQCWELRGE 215
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNL-TNLFFFPTPKEFKEPKLD-SQVVTKFVP--AL 116
L +P L+ Y E + NL +L P LD ++ ++P A
Sbjct: 216 LLRRHTAPALTAYAEETATTM---RNLDQDLALAP---------LDVNEGFAVYIPGTAP 263
Query: 117 MSLMVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQ 176
S + A +P R S R VQ+L ++G S KLY V+
Sbjct: 264 SSTEGGQKGHAPKPHVPGLPRAS----------LRRASASVQRLKRVVGDSKKLYLGVVI 313
Query: 177 FLRTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRS 236
R F +V C+LR++LLM+LHD E + VD CH+ W DAC+R++ +D +R
Sbjct: 314 NCRVHFAEHGDVGACSLRSQLLMSLHDDEKTGLCGVDRCHRLAWLADACVRDRCLDGRRC 373
Query: 237 RELQGFLDSI 246
E+ ++ I
Sbjct: 374 AEIVQIIEKI 383
>gi|384250858|gb|EIE24337.1| hypothetical protein COCSUDRAFT_47235 [Coccomyxa subellipsoidea
C-169]
Length = 716
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 143/358 (39%), Gaps = 91/358 (25%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+ SF + + QLR V +A+L + +L+ L D+EL+ D V++++W+ ++
Sbjct: 129 LLEASFAYIGLPQLREVPLAVLGRLKPVPAAFLKQLATDKELFHDLPQNVQQEVWELDRK 188
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
L PL+ +Y E +L K ++D +FVP
Sbjct: 189 LLQQHALPLVERYTWETGTVL------------------KALEMD-----EFVPPAPGSG 225
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGE-VVQKLAHMIGSSVKLYDMVLQFL- 178
+V + R R G ++KL M+G S +Y ++
Sbjct: 226 PGPRV---------------------ARRIQRSGSPTLKKLVAMVGRSHAIYRGIMDLCC 264
Query: 179 ------RTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVD 232
+ + YC+LR++LLMA HD I ++ S +P HK W LDAC++++ +D
Sbjct: 265 VRLRDSESAYCGVKEAAYCSLRSQLLMAAHDANIVELTSKEPVHKLAWTLDACLKDRVID 324
Query: 233 IKRSRELQGFLD-------------------------------------SIKRGHE--QV 253
+R REL FL S G E +
Sbjct: 325 GRRLRELTHFLSTFDRQQAALAAAARKAAPRKRGREGVADAESMGAPGRSTNAGAEPLRA 384
Query: 254 LGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMI 311
L D M L DP ++ + ++ L L+ +A+P E+ L L R+L L M+
Sbjct: 385 LADAGMVLRDPSVMHLIIHHVLRRLERLVEEQAVPSEDPDLAFLTRLLQLAGGCRAML 442
>gi|443720141|gb|ELU09957.1| hypothetical protein CAPTEDRAFT_189620, partial [Capitella teleta]
Length = 182
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 61/74 (82%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L KSFP+V VK LRPVV+ I+++ I +YL V+V ++ELYK++ EVK+QIW+DNQ+
Sbjct: 107 LLTKSFPVVNVKSLRPVVLCIMQHLPKIKQEYLSVIVENKELYKESSVEVKQQIWQDNQA 166
Query: 61 LFGDEVSPLLSQYI 74
LFGDEVSPLLS+YI
Sbjct: 167 LFGDEVSPLLSKYI 180
>gi|119608784|gb|EAW88378.1| cofactor of BRCA1, isoform CRA_b [Homo sapiens]
Length = 290
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 97/175 (55%), Gaps = 25/175 (14%)
Query: 256 DLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMIDTQG 315
DLSM LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR+LALG AW MID+Q
Sbjct: 10 DLSMILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLRLLALGQGAWDMIDSQ- 68
Query: 316 GNILIEIFRSCFKLYDMVLQFLRTL--FL---RTHNV-------HYWPV------PDAVQ 357
+F+ +++ +FL L FL T NV PV P++
Sbjct: 69 ------VFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEKAPVSYPNTLPESFT 122
Query: 358 AYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSS 412
++QE +AC + +YY LH + R++ L+R+L L + D AF D FLH L+
Sbjct: 123 KFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDIFLHLLTG 177
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 30/39 (76%)
Query: 99 FKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKMPPDER 137
FKEPK++ +++T+F+P LMS +VDD ++ K+P +E+
Sbjct: 70 FKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEK 108
>gi|119608783|gb|EAW88377.1| cofactor of BRCA1, isoform CRA_a [Homo sapiens]
Length = 278
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 25/172 (14%)
Query: 259 MTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMIDTQGGNI 318
M LCDP+AIN LA S ++ L L+ E LPR++ L+LLLR+LALG AW MID+Q
Sbjct: 1 MILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLRLLALGQGAWDMIDSQ---- 56
Query: 319 LIEIFRSCFKLYDMVLQFLRTL--FL---RTHNVHY-----------WP--VPDAVQAYV 360
+F+ +++ +FL L FL T NV +P +P++ ++
Sbjct: 57 ---VFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEKAPVSYPNTLPESFTKFL 113
Query: 361 QESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSS 412
QE +AC + +YY LH + R++ L+R+L L + D AF D FLH L+
Sbjct: 114 QEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDIFLHLLTG 165
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 30/39 (76%)
Query: 99 FKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKMPPDER 137
FKEPK++ +++T+F+P LMS +VDD ++ K+P +E+
Sbjct: 58 FKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEK 96
>gi|412988778|emb|CCO15369.1| predicted protein [Bathycoccus prasinos]
Length = 977
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 58/90 (64%)
Query: 156 VVQKLAHMIGSSVKLYDMVLQFLRTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPC 215
+ +L ++G ++ LY+ V++ +RT + T + C LR++ LMA HD E+Q++ +DP
Sbjct: 362 AIHRLRKVVGDNITLYNAVVREIRTRYANTGDPSTCALRSQFLMAFHDDEVQELCEIDPS 421
Query: 216 HKFTWCLDACIREKNVDIKRSRELQGFLDS 245
H+ W +DAC+R++ +D +R E+ LDS
Sbjct: 422 HRLAWLMDACVRDRYLDNRRLLEMGNILDS 451
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+ SFP + +++L+ + + IL + + YL+++ RD +++ +V+RQ+W ++
Sbjct: 172 LLQASFPFIGIEELKRIPLTILERLSPVPANYLKLISRDLSIFRQCSLKVQRQVWAMDKG 231
Query: 61 LFGDEVSPLLSQYIREKENILFDHHNLTNLFFFP-TPKE-FKEPKLDSQ 107
+S +L Y EKE +L H ++ ++ P P+E + P+ +S+
Sbjct: 232 TLRKNLSSVLDSYGEEKE-VLRRHSSIEDVQLAPLVPEEDWSAPRKESE 279
>gi|303279865|ref|XP_003059225.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459061|gb|EEH56357.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 720
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 170 LYDMVLQFLRTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREK 229
LY ++ R + + C+LR++ LMALHD E D+ + D CH+ W DAC R++
Sbjct: 14 LYLGIVSLCRAQYAEHGSPAACSLRSQFLMALHDEEQTDLCASDRCHRLAWLADACARDR 73
Query: 230 NVDIKRSREL 239
VD +R E+
Sbjct: 74 CVDGRRLTEI 83
>gi|358340803|dbj|GAA29716.2| negative elongation factor B [Clonorchis sinensis]
Length = 1147
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 108/251 (43%), Gaps = 25/251 (9%)
Query: 14 LRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGDEVSPLLSQY 73
+R ++M +L I ++++ ++V ++ LY D V R IW + F +E+ +++++
Sbjct: 99 MRALIMQVLGKMNAIKERHVNMIVDNQYLYDDAPLPVLRHIWVAHPHKFQEELDKVIAKF 158
Query: 74 IREKENILFDH------------HNLTNLFFFPTPKEFKEPKL--------DSQVV-TKF 112
+ L D +L L ++P + ++ + D Q + K
Sbjct: 159 QNSWSDALLDALSMGITSTASSTADLLPLLYWPPKRRRRDTAIIRMVEMIGDGQTLYDKT 218
Query: 113 VPALMSLMVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYD 172
V L V + A N + RE++ I + R + + A + +
Sbjct: 219 VTFLRDQCVRLEQAASNLALGSINREASAEPITPPTKRRRRLDSNESSAEKVRQTETPTS 278
Query: 173 MVLQFLRTLFLRTH----NVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIRE 228
V+ F FL + T+R +LLM+L++ +I + D H+F WCLDAC+R
Sbjct: 279 GVVPFTPPAFLPNQPAVVSTVLSTIRFDLLMSLNEAKIDRLCVPDRIHQFVWCLDACVRN 338
Query: 229 KNVDIKRSREL 239
+ +D + + L
Sbjct: 339 RRIDQRHASGL 349
>gi|256052214|ref|XP_002569670.1| hypothetical protein [Schistosoma mansoni]
Length = 1117
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 112/262 (42%), Gaps = 42/262 (16%)
Query: 14 LRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGDEVSPLLSQY 73
+R ++M +L I ++++ ++V ++ LY D V R IW + F +E+ +++ +
Sbjct: 114 MRSLIMQVLGKMNSIKERHVNLIVDNKYLYDDAPLPVLRHIWVAHPHKFQEELDKVIATF 173
Query: 74 IREKENILFDH------------HNLTNLFFFPTPKEFKEPKL--------DSQVV---- 109
+ + D +L + ++P + ++P + + QV+
Sbjct: 174 QSTWSSAILDALSMSIMSTASTTADLVPILYWPPRRRRRDPSIVRIVEMIGEGQVLYDKT 233
Query: 110 --------TKFVPALMSLMVDDQVRALNSKMPPDERESAITIIEHS-GRFN---RIGEVV 157
K A SLM + + P +E + + S RF+ + +++
Sbjct: 234 ISILRDQCIKCEKAAYSLMEQQIKSTIGNNNPSEEIDEQPPPAKRSRQRFSSKEKSSDII 293
Query: 158 QKLAHMIGSSVKLYDMVLQFLRTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHK 217
Q A + L M Q + CTLR +LLM+L++ +I + D H+
Sbjct: 294 QPSASQPIPYIPLAFMPNQ------PSVASATLCTLRFDLLMSLNEAKIDRLCVPDRIHR 347
Query: 218 FTWCLDACIREKNVDIKRSREL 239
F WCLDAC+R + +D + + EL
Sbjct: 348 FVWCLDACVRNRRIDQRHASEL 369
>gi|350644275|emb|CCD60973.1| hypothetical protein Smp_062920 [Schistosoma mansoni]
Length = 1315
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 112/263 (42%), Gaps = 44/263 (16%)
Query: 14 LRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGDEVSPLLSQY 73
+R ++M +L I ++++ ++V ++ LY D V R IW + F +E+ +++ +
Sbjct: 114 MRSLIMQVLGKMNSIKERHVNLIVDNKYLYDDAPLPVLRHIWVAHPHKFQEELDKVIATF 173
Query: 74 IREKENILFDH------------HNLTNLFFFPTPKEFKEPKL--------DSQVV---- 109
+ + D +L + ++P + ++P + + QV+
Sbjct: 174 QSTWSSAILDALSMSIMSTASTTADLVPILYWPPRRRRRDPSIVRIVEMIGEGQVLYDKT 233
Query: 110 --------TKFVPALMSLMVDDQVRALNSKMPPDER--ESAITIIEHSGRFN---RIGEV 156
K A SLM + Q+++ P E E RF+ + ++
Sbjct: 234 ISILRDQCIKCEKAAYSLM-EQQIKSTIGNNNPSEEIDEQPPPAKRGRQRFSSKEKSSDI 292
Query: 157 VQKLAHMIGSSVKLYDMVLQFLRTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCH 216
+Q A + L M Q + CTLR +LLM+L++ +I + D H
Sbjct: 293 IQPSASQPIPYIPLAFMPNQ------PSVASATLCTLRFDLLMSLNEAKIDRLCVPDRIH 346
Query: 217 KFTWCLDACIREKNVDIKRSREL 239
+F WCLDAC+R + +D + + EL
Sbjct: 347 RFVWCLDACVRNRRIDQRHASEL 369
>gi|167518986|ref|XP_001743833.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777795|gb|EDQ91411.1| predicted protein [Monosiga brevicollis MX1]
Length = 664
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 116/301 (38%), Gaps = 54/301 (17%)
Query: 2 LKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSL 61
LK +P ++++P+V+ +L ++ YL L L + + VK+Q+W
Sbjct: 106 LKLCWPFALTEEIQPLVVQLLNQNAELEPSYLEELQNHPTLLEQCNLNVKQQLWVAKPGA 165
Query: 62 FGDEVSPLLSQY-IREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLM 120
F P L Q +R + L +P L +
Sbjct: 166 FTAVAGPFLRQAALRLNQRCL-------------------------------LPVLFDRL 194
Query: 121 VDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRT 180
D+ L+ + + I E++Q ++GS +KLY+ +L LR+
Sbjct: 195 FDNPFADLDEEA-----------------TSEISELLQ----LVGSKMKLYEALLVELRS 233
Query: 181 LFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQ 240
F++ Y LR L L I S DPC +F L ++ + + +L+
Sbjct: 234 QFVKHGEPAYGCLRLRLSHGLTRAGADAIASKDPCSRFATLLTMVCQDAAISDQMYTDLE 293
Query: 241 GFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRM 300
L S+ + +L D+ + L P+ A A+ L I LPR + L +LL++
Sbjct: 294 AALTSLAQEPTALL-DVGLMLLHPHLAWTFAQIAVSRLESNITACKLPRHDEQLRILLQL 352
Query: 301 L 301
L
Sbjct: 353 L 353
>gi|6330245|dbj|BAA86496.1| KIAA1182 protein [Homo sapiens]
Length = 210
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 352 VPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLS 411
+P++ ++QE +AC + +YY LH + R++ L+R+L L + D AF D FLH L+
Sbjct: 37 LPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDIFLHLLT 96
Query: 412 S 412
Sbjct: 97 G 97
>gi|326431467|gb|EGD77037.1| hypothetical protein PTSG_07378 [Salpingoeca sp. ATCC 50818]
Length = 958
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L ++FP V+ ++LRPV + IL I K LR L +L + +VKRQ+W+ +
Sbjct: 129 LLLQTFPYVQFEELRPVTLRILNRYHSIPSKVLRHLRDHPKLMDECSLDVKRQVWQYDDF 188
Query: 61 LFGDEVSPLLSQY 73
+F + P+L Y
Sbjct: 189 VFSAVLQPMLHDY 201
>gi|348670178|gb|EGZ10000.1| hypothetical protein PHYSODRAFT_338700 [Phytophthora sojae]
Length = 1165
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 112/287 (39%), Gaps = 55/287 (19%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L+++FP + ++LR + +A+L + YLR L +R + + V+R+I + ++
Sbjct: 133 VLEQTFPYIEFRELRAIPIAVLARQEDTPELYLRELTENRRILSELPVHVRRKILQVDRR 192
Query: 61 LFGDEVSPLLSQYIREKENILFDH--------------HNLTNLFFFPTPKEFKEPKLDS 106
V +Y+ ++ +H N N T + ++ LD
Sbjct: 193 ELQLLVEECTREYVADQLEWYLNHPTSGSATTHRSLSRRNSNNSMR--TGNQNRKRSLDE 250
Query: 107 QV------VTKFVPALMSLMVDDQVRALN--SKMP---PDERESAITIIEHSGRFNRIGE 155
V+ VP+ + + P PDER R
Sbjct: 251 SAGGSLWNVSSHVPSSADAAGSSASASGFSSERRPSYSPDER-------------RRDNP 297
Query: 156 VVQKLAHMIGSSVKLYDMVLQFLRTLFL-------RTHN-----VHYCTLRAELLMALHD 203
+ KL M+G S LY L+ R + T+N V Y +L + L +
Sbjct: 298 ALVKLVEMLGDSEPLYLATLEIWRNYIVTANIPGSATNNHPKEYVDYVSLLGAMRSDLAN 357
Query: 204 LE---IQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIK 247
L+ ++ DP HKF W LD ++ + ++I + EL GF+ ++
Sbjct: 358 LQRDKTTPLLRTDPLHKFIWFLDRALKNQTLEITQLHELLGFIGRLR 404
>gi|428177228|gb|EKX46109.1| hypothetical protein GUITHDRAFT_163104 [Guillardia theta CCMP2712]
Length = 518
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKD--N 58
+L+K FP + + +LR + + + N + YL L + +L K+ V+RQ+W + +
Sbjct: 89 LLEKCFPYISIPELRDIPLTLFSNLNKVPVSYLVTLAQSPDLVKELPLSVRRQVWANEPD 148
Query: 59 QSLFGDEVSPLLSQY 73
++LF E + LL+ Y
Sbjct: 149 KALFRKEFNGLLNSY 163
>gi|348665720|gb|EGZ05549.1| hypothetical protein PHYSODRAFT_533826 [Phytophthora sojae]
Length = 552
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 105 DSQVVTKFVPALMSLMVDDQVRALN---SKMPPDERESAITIIEHSGRFNRIGEVVQKLA 161
D Q +FVPAL+S + +Q+ A+ +PP+E+ +A +IE + R+ E++Q LA
Sbjct: 353 DKQYADQFVPALLSAVCKNQLAAVKWLIDHLPPEEQSTASCVIEAAASHGRL-EILQYLA 411
Query: 162 HMIGSS 167
+ +S
Sbjct: 412 KLDAAS 417
>gi|384487970|gb|EIE80150.1| hypothetical protein RO3G_04855 [Rhizopus delemar RA 99-880]
Length = 341
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRN-TTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQ 59
+ K+FP + + ++P+ MA+L+ H+ + + L D ++ + +K++++K ++
Sbjct: 88 LFDKTFPYIHIPLMQPIPMALLKKFERHVGEDVIEKLKSDMNVFANCPLNIKQRVYKQDE 147
Query: 60 SLFGDEVSPLLSQY 73
+ F + PLL+ Y
Sbjct: 148 AFFQQSMLPLLNSY 161
>gi|443715389|gb|ELU07390.1| hypothetical protein CAPTEDRAFT_199057 [Capitella teleta]
Length = 581
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 15 RPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGDEVSPLLSQYI 74
RP+V + + TH K+ + D+ +++ TD + +QIWKD++ +P + +
Sbjct: 90 RPIVPKVQQKVTHPPSKFPPNIFNDKPVFQRTDFDAIKQIWKDDKWSLELSYTPYRAYVV 149
Query: 75 REKENIL 81
R+ E L
Sbjct: 150 RDNETFL 156
>gi|325183619|emb|CCA18079.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 952
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 108/271 (39%), Gaps = 40/271 (14%)
Query: 1 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQS 60
+L K+FP + ++LR +V+AIL H +L L +++L + V+R+I + +
Sbjct: 175 LLDKTFPYIEFRELRSLVIAILSRQEHTPSIFLHQLTENQKLLAELPVVVRRKIMHVDTN 234
Query: 61 LFGDEVSPLLSQYIREKENILF----DHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPAL 116
+ + V+ ++Y E +L HN T F + ++V +L
Sbjct: 235 QWKEFVATTTAEYFDEWNMLLLTRCSQKHNQTQTLF---------------EMAQYVESL 279
Query: 117 MSLMVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQ 176
+ S++ R+ T+ E + + + +L MI S +LY L+
Sbjct: 280 CLDTTNASDSNGGSRLV--SRKMHFTLEER----RKSSKALSQLMDMIADSKQLYFDTLK 333
Query: 177 F----LRTLFLRTHNVHY-CTLRAELLMALHDLEIQDI------ISVDPCHKFTWCLDAC 225
++ N H ++ + ++ + DP HKFTW LD
Sbjct: 334 IWKEHIKNAKFPGKNTHSKISVESYPFFGAMRFDVSSLNRDKLGAKADPIHKFTWNLDRV 393
Query: 226 IR----EKNVDIKRSRELQGFLDSIKRGHEQ 252
+R + +D ++ E+Q + +K Q
Sbjct: 394 LRNLTDDARIDEQQWLEIQNSIRELKVEESQ 424
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,543,825,825
Number of Sequences: 23463169
Number of extensions: 256349832
Number of successful extensions: 773905
Number of sequences better than 100.0: 138
Number of HSP's better than 100.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 773309
Number of HSP's gapped (non-prelim): 440
length of query: 443
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 297
effective length of database: 8,933,572,693
effective search space: 2653271089821
effective search space used: 2653271089821
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 78 (34.7 bits)