Diaphorina citri psyllid: psy4191

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440---
MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSSYEISLWTSLNWQRVWLRHYFQTSPKRNFNVL
cccccccccccccHHHHHHHHHHccccccHHHHHHHHHcHHHHHHccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccc
*LKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPK***********VTKFVPALM*****************************SGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSSYEISLWTSLNWQRVWLRHYFQTSPKRNF*VL
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MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVRDRELYKDTDTEVKRQIWKDNQSLFGDEVSPLLSQYIREKENILFDHHNLTNLFFFPTPKEFKEPKLDSQVVTKFVPALMSLMVDDQVRALNSKMPPDERESAITIIEHSGRFNRIGEVVQKLAHMIGSSVKLYDMVLQFLRTLFLRTHNVHYCTLRAELLMALHDLEIQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDSIKRGHEQVLGDLSMTLCDPYAINFLATSAMKILHYLINNEALPRENTVLVLLLRMLALGLSAWVMIDTQGGNILIEIFRSCFKLYDMVLQFLRTLFLRTHNVHYWPVPDAVQAYVQESSVACIISMYYTLHTARSRDRVGLMRVLGVLATSESDRAFDDPFLHFLSSYEISLWTSLNWQRVWLRHYFQTSPKRNFNVL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Negative elongation factor B Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex and causes transcriptional pausing, is counteracted by the P-TEFb kinase complex. May be able to induce chromatin unfolding.confidentQ8C4Y3
Negative elongation factor B Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex and causes transcriptional pausing, is counteracted by the P-TEFb kinase complex. May be able to induce chromatin unfolding.confidentQ8WX92
Negative elongation factor B Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II.confidentQ9Y113

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0034244 [BP]negative regulation of transcription elongation from RNA polymerase II promoterprobableGO:0009892, GO:0080090, GO:0009890, GO:0031327, GO:0031326, GO:0031324, GO:0031323, GO:0050789, GO:0010605, GO:0019222, GO:2000112, GO:0060255, GO:0006357, GO:0065007, GO:0048519, GO:0010468, GO:0034243, GO:0045934, GO:0019219, GO:0032784, GO:0009889, GO:0032785, GO:0050794, GO:0008150, GO:0051171, GO:0051172, GO:2001141, GO:0051253, GO:0051252, GO:0006355, GO:0010556, GO:0010558, GO:0048523

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!