BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4192
(317 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24439|ATPO_DROME ATP synthase subunit O, mitochondrial OS=Drosophila melanogaster
GN=Oscp PE=2 SV=2
Length = 209
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 116/180 (64%), Gaps = 23/180 (12%)
Query: 1 MASFRPLA---RSFSTSQVSQQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELIS 57
MAS LA R+ S S +Q VK PVQVFG +GRYATALYSAA+KL QLD VEK+L +
Sbjct: 1 MASINKLALLSRTLS-SAAAQATVKPPVQVFGLEGRYATALYSAASKLSQLDQVEKDLTA 59
Query: 58 FQKSLKIE-------------------ALKIVGQKKNFSAASINLLALLAENGKIKNIDG 98
Q +++ + ALK +K F+ A++NLL LLA+NG++K +D
Sbjct: 60 LQATIRSDKKLREYVTSPIINKKVMATALKEASEKLRFAPATVNLLGLLADNGRLKKLDT 119
Query: 99 VINNFSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
VIN + IMAAHRG++ EV+TA+PL+ + +L+ LK F K E++ +T++VDPSIIG
Sbjct: 120 VINAYKTIMAAHRGEVVCEVVTAKPLDASQSKQLEGALKSFLKGNESLKITSRVDPSIIG 179
Score = 144 bits (364), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
Query: 172 LARSFSTSQISQQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDV 231
L+R+ S S +Q VK PVQVFG +GRYATALYSAA+KL QLD VEK+L + Q +++D
Sbjct: 10 LSRTLS-SAAAQATVKPPVQVFGLEGRYATALYSAASKLSQLDQVEKDLTALQATIRSDK 68
Query: 232 KFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIM 291
K R++V P I K + ALK +K F+ A++NLL LLA+NG++K +D VIN + IM
Sbjct: 69 KLREYVTSPIINKKVMATALKEASEKLRFAPATVNLLGLLADNGRLKKLDTVINAYKTIM 128
Query: 292 AAHRGDLPVEVITAR 306
AAHRG++ EV+TA+
Sbjct: 129 AAHRGEVVCEVVTAK 143
>sp|Q06647|ATPO_RAT ATP synthase subunit O, mitochondrial OS=Rattus norvegicus GN=Atp5o
PE=1 SV=1
Length = 213
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 111/170 (65%), Gaps = 20/170 (11%)
Query: 9 RSFSTSQVS--QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELIS--------- 57
RSFSTS V +LV+ PVQV+G +GRYATALYSAA+K K+LD VEKEL+
Sbjct: 14 RSFSTSVVRPFSKLVRPPVQVYGIEGRYATALYSAASKQKRLDQVEKELLRVGQLLKDPK 73
Query: 58 ---------FQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 108
++S+K+++LK + K+ FS + NL+ LLAENG++ N GVI+ FS IM+
Sbjct: 74 VSLAVLNPYIKRSIKVKSLKDITTKEKFSPLTANLMNLLAENGRLGNTQGVISAFSTIMS 133
Query: 109 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
HRG++P V TA PL+EA SEL++ L F KG+ + L K DPSI+G
Sbjct: 134 VHRGEVPCTVTTAFPLDEAVLSELKTVLNSFLSKGQILNLEVKTDPSIMG 183
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 97/134 (72%), Gaps = 3/134 (2%)
Query: 174 RSFSTSQIS--QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDV 231
RSFSTS + +LV+ PVQV+G +GRYATALYSAA+K K+LD VEKEL+ Q LK D
Sbjct: 14 RSFSTSVVRPFSKLVRPPVQVYGIEGRYATALYSAASKQKRLDQVEKELLRVGQLLK-DP 72
Query: 232 KFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIM 291
K VL+P I++S+K+++LK + K+ FS + NL+ LLAENG++ N GVI+ FS IM
Sbjct: 73 KVSLAVLNPYIKRSIKVKSLKDITTKEKFSPLTANLMNLLAENGRLGNTQGVISAFSTIM 132
Query: 292 AAHRGDLPVEVITA 305
+ HRG++P V TA
Sbjct: 133 SVHRGEVPCTVTTA 146
>sp|Q5RD23|ATPO_PONAB ATP synthase subunit O, mitochondrial OS=Pongo abelii GN=ATP5O PE=2
SV=1
Length = 213
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 110/170 (64%), Gaps = 20/170 (11%)
Query: 9 RSFSTSQVSQ--QLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISF-------- 58
R FSTS V +LV+ PVQV+G +GRYATALYSAA+K +L+ VEKEL+
Sbjct: 14 RCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPK 73
Query: 59 ----------QKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 108
++S+K+++L + K+ FS + NL+ LLAENG++ N GV++ FS +M+
Sbjct: 74 VAAPVLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMS 133
Query: 109 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
AHRG++P V +A PLEEA SEL++ LK F +G+ + L K DPSI+G
Sbjct: 134 AHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILG 183
Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 95/134 (70%), Gaps = 3/134 (2%)
Query: 174 RSFSTSQISQ--QLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDV 231
R FSTS + +LV+ PVQV+G +GRYATALYSAA+K +L+ VEKEL+ Q LK +
Sbjct: 14 RCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILK-EP 72
Query: 232 KFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIM 291
K VL+P +++S+K+++L + K+ FS + NL+ LLAENG++ N GV++ FS +M
Sbjct: 73 KVAAPVLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMM 132
Query: 292 AAHRGDLPVEVITA 305
+AHRG++P V +A
Sbjct: 133 SAHRGEVPCTVTSA 146
>sp|P48047|ATPO_HUMAN ATP synthase subunit O, mitochondrial OS=Homo sapiens GN=ATP5O PE=1
SV=1
Length = 213
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 109/170 (64%), Gaps = 20/170 (11%)
Query: 9 RSFSTSQVS--QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISF-------- 58
R FSTS V +LV+ PVQV+G +GRYATALYSAA+K +L+ VEKEL+
Sbjct: 14 RCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPK 73
Query: 59 ----------QKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 108
++S+K+++L + K+ FS + NL+ LLAENG++ N GV++ FS +M+
Sbjct: 74 VAASVLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMS 133
Query: 109 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
HRG++P V +A PLEEA SEL++ LK F +G+ + L K DPSI+G
Sbjct: 134 VHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILG 183
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 94/134 (70%), Gaps = 3/134 (2%)
Query: 174 RSFSTSQIS--QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDV 231
R FSTS + +LV+ PVQV+G +GRYATALYSAA+K +L+ VEKEL+ Q LK +
Sbjct: 14 RCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILK-EP 72
Query: 232 KFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIM 291
K VL+P +++S+K+++L + K+ FS + NL+ LLAENG++ N GV++ FS +M
Sbjct: 73 KVAASVLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMM 132
Query: 292 AAHRGDLPVEVITA 305
+ HRG++P V +A
Sbjct: 133 SVHRGEVPCTVTSA 146
>sp|B1MT69|ATPO_CALMO ATP synthase subunit O, mitochondrial OS=Callicebus moloch GN=ATP5O
PE=3 SV=1
Length = 213
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 108/170 (63%), Gaps = 20/170 (11%)
Query: 9 RSFSTSQVSQ--QLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISF-------- 58
R FSTS V +LV+ PVQV+G +GRYATALYSAA+K K+L+ VEKEL+
Sbjct: 14 RYFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQKKLEQVEKELLRVAQILKEPK 73
Query: 59 ----------QKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 108
+ S+K+++L + K+ FS + NL+ LLAENG++ N GV++ FS +M+
Sbjct: 74 VAASVLNPYVKHSVKVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMS 133
Query: 109 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
HRG++P V TA PLEE SEL++ LK F +G+ + L K DPSI+G
Sbjct: 134 VHRGEIPCTVTTASPLEETTLSELKTVLKSFLSQGQILKLEVKTDPSIMG 183
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 94/134 (70%), Gaps = 3/134 (2%)
Query: 174 RSFSTSQISQ--QLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDV 231
R FSTS + +LV+ PVQV+G +GRYATALYSAA+K K+L+ VEKEL+ Q LK +
Sbjct: 14 RYFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQKKLEQVEKELLRVAQILK-EP 72
Query: 232 KFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIM 291
K VL+P ++ S+K+++L + K+ FS + NL+ LLAENG++ N GV++ FS +M
Sbjct: 73 KVAASVLNPYVKHSVKVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMM 132
Query: 292 AAHRGDLPVEVITA 305
+ HRG++P V TA
Sbjct: 133 SVHRGEIPCTVTTA 146
>sp|B0VXH3|ATPO_CALJA ATP synthase subunit O, mitochondrial OS=Callithrix jacchus
GN=ATP5O PE=3 SV=1
Length = 213
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 108/170 (63%), Gaps = 20/170 (11%)
Query: 9 RSFSTSQVS--QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISF-------- 58
R F TS V +LV+ PVQV+G +GRYATALYSAA+K K+L+ VEKEL+
Sbjct: 14 RYFGTSVVRPFAKLVRPPVQVYGVEGRYATALYSAASKQKKLEQVEKELLRVAQILKEPK 73
Query: 59 ----------QKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 108
+ S+K+++L + K+ FS + NL+ LLAENG++ N GV++ FS +M+
Sbjct: 74 VAASVLNPYVKHSIKVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMS 133
Query: 109 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
HRG++P V TA PLEEA SEL++ LK F +G+ + L K DPSI+G
Sbjct: 134 VHRGEVPCTVTTASPLEEATLSELKTVLKSFLSQGQILKLEVKTDPSIMG 183
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 93/134 (69%), Gaps = 3/134 (2%)
Query: 174 RSFSTSQIS--QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDV 231
R F TS + +LV+ PVQV+G +GRYATALYSAA+K K+L+ VEKEL+ Q LK +
Sbjct: 14 RYFGTSVVRPFAKLVRPPVQVYGVEGRYATALYSAASKQKKLEQVEKELLRVAQILK-EP 72
Query: 232 KFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIM 291
K VL+P ++ S+K+++L + K+ FS + NL+ LLAENG++ N GV++ FS +M
Sbjct: 73 KVAASVLNPYVKHSIKVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMM 132
Query: 292 AAHRGDLPVEVITA 305
+ HRG++P V TA
Sbjct: 133 SVHRGEVPCTVTTA 146
>sp|Q2EN81|ATPO_PIG ATP synthase subunit O, mitochondrial OS=Sus scrofa GN=ATP5O PE=1
SV=1
Length = 213
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 110/170 (64%), Gaps = 20/170 (11%)
Query: 9 RSFSTSQVS--QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISF-------- 58
R FSTS V +LV+ PVQ++G +GRYATALYSAA+K +L+ VEKEL+
Sbjct: 14 RCFSTSVVRPFAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPK 73
Query: 59 ----------QKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 108
++S+K+++L + K+ FS + NL+ LLAENG++ + GVI+ FS +M+
Sbjct: 74 VAASIMNPYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLSSTPGVISAFSTMMS 133
Query: 109 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
HRG++P V TA PL+EA +EL++ LK F KG+ + L KVDPSI+G
Sbjct: 134 VHRGEVPCSVTTASPLDEATLTELKTVLKSFLSKGQILKLEVKVDPSIMG 183
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 94/134 (70%), Gaps = 3/134 (2%)
Query: 174 RSFSTSQIS--QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDV 231
R FSTS + +LV+ PVQ++G +GRYATALYSAA+K +L+ VEKEL+ Q LK +
Sbjct: 14 RCFSTSVVRPFAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILK-EP 72
Query: 232 KFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIM 291
K +++P +++S+K+++L + K+ FS + NL+ LLAENG++ + GVI+ FS +M
Sbjct: 73 KVAASIMNPYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLSSTPGVISAFSTMM 132
Query: 292 AAHRGDLPVEVITA 305
+ HRG++P V TA
Sbjct: 133 SVHRGEVPCSVTTA 146
>sp|B2B9A1|ATPO_RHIFE ATP synthase subunit O, mitochondrial OS=Rhinolophus ferrumequinum
GN=ATP5O PE=3 SV=1
Length = 213
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 111/178 (62%), Gaps = 20/178 (11%)
Query: 1 MASFRPLARSFSTSQVS--QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELIS- 57
++ F R FSTS V +LV+ PVQ++G +GRYATALYSAA+K +L+ VEKEL+
Sbjct: 6 VSGFSRQVRCFSTSVVRPFTKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRV 65
Query: 58 -----------------FQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVI 100
++S+K+++L + K+ FS + NL+ LLAENG++ N GVI
Sbjct: 66 AQLLKEPKMAASIMNPYIKRSIKVKSLNDMTTKEKFSPLTSNLMNLLAENGRLNNTPGVI 125
Query: 101 NNFSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
+ FS IM+ HRG++P V TA PL+EA SEL++ L+ F K + + L K DPSI+G
Sbjct: 126 SAFSTIMSVHRGEVPCSVTTASPLDEATLSELKTVLQSFLSKNQILKLEVKTDPSIMG 183
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 94/134 (70%), Gaps = 3/134 (2%)
Query: 174 RSFSTSQIS--QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDV 231
R FSTS + +LV+ PVQ++G +GRYATALYSAA+K +L+ VEKEL+ Q LK +
Sbjct: 14 RCFSTSVVRPFTKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVAQLLK-EP 72
Query: 232 KFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIM 291
K +++P I++S+K+++L + K+ FS + NL+ LLAENG++ N GVI+ FS IM
Sbjct: 73 KMAASIMNPYIKRSIKVKSLNDMTTKEKFSPLTSNLMNLLAENGRLNNTPGVISAFSTIM 132
Query: 292 AAHRGDLPVEVITA 305
+ HRG++P V TA
Sbjct: 133 SVHRGEVPCSVTTA 146
>sp|Q9DB20|ATPO_MOUSE ATP synthase subunit O, mitochondrial OS=Mus musculus GN=Atp5o PE=1
SV=1
Length = 213
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 110/170 (64%), Gaps = 20/170 (11%)
Query: 9 RSFSTSQVSQ--QLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELIS--------- 57
RSFSTS V +LV+ PVQV+G +GRYATALYSAA+K K+LD VEKEL+
Sbjct: 14 RSFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKEKKLDQVEKELLRVGQLLKDPK 73
Query: 58 ---------FQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 108
++++K+++L + +++ FS + NL+ LLAENG++ N G+I+ FS IM+
Sbjct: 74 VSLAVLNPYIKRTVKVKSLNDITKREKFSPLTANLMNLLAENGRLGNTQGIISAFSTIMS 133
Query: 109 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
HRG++P V TA PL++A SEL++ LK F + + L K DPSI+G
Sbjct: 134 VHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQILKLEIKTDPSIMG 183
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 97/134 (72%), Gaps = 3/134 (2%)
Query: 174 RSFSTSQISQ--QLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDV 231
RSFSTS + +LV+ PVQV+G +GRYATALYSAA+K K+LD VEKEL+ Q LK D
Sbjct: 14 RSFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKEKKLDQVEKELLRVGQLLK-DP 72
Query: 232 KFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIM 291
K VL+P I++++K+++L + +++ FS + NL+ LLAENG++ N G+I+ FS IM
Sbjct: 73 KVSLAVLNPYIKRTVKVKSLNDITKREKFSPLTANLMNLLAENGRLGNTQGIISAFSTIM 132
Query: 292 AAHRGDLPVEVITA 305
+ HRG++P V TA
Sbjct: 133 SVHRGEVPCTVTTA 146
>sp|P13621|ATPO_BOVIN ATP synthase subunit O, mitochondrial OS=Bos taurus GN=ATP5O PE=1
SV=2
Length = 213
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 108/170 (63%), Gaps = 20/170 (11%)
Query: 9 RSFSTSQVS--QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISF-------- 58
R FSTS V +LV+ PVQ++G +GRYATALYSAA+K +L+ VEKEL+
Sbjct: 14 RCFSTSVVRPFAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILKEPK 73
Query: 59 ----------QKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 108
++S+K+++L + K+ FS + NL+ LLAENG++ N VI+ FS +M+
Sbjct: 74 MAASLLNPYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFSTMMS 133
Query: 109 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
HRG++P V TA L+EA +EL++ LK F KG+ + L K+DPSI+G
Sbjct: 134 VHRGEVPCTVTTASALDEATLTELKTVLKSFLSKGQVLKLEVKIDPSIMG 183
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 93/134 (69%), Gaps = 3/134 (2%)
Query: 174 RSFSTSQIS--QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDV 231
R FSTS + +LV+ PVQ++G +GRYATALYSAA+K +L+ VEKEL+ Q LK +
Sbjct: 14 RCFSTSVVRPFAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILK-EP 72
Query: 232 KFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIM 291
K +L+P +++S+K+++L + K+ FS + NL+ LLAENG++ N VI+ FS +M
Sbjct: 73 KMAASLLNPYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFSTMM 132
Query: 292 AAHRGDLPVEVITA 305
+ HRG++P V TA
Sbjct: 133 SVHRGEVPCTVTTA 146
>sp|B3EX21|ATPO_SORAR ATP synthase subunit O, mitochondrial OS=Sorex araneus GN=ATP5O
PE=3 SV=1
Length = 213
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 105/170 (61%), Gaps = 20/170 (11%)
Query: 9 RSFSTSQVSQ--QLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELI---------- 56
RSFSTS +LV+ P+Q++G +GRYATALYSAA+K +LD VEKEL+
Sbjct: 14 RSFSTSVARPFAKLVRPPIQIYGVEGRYATALYSAASKQNKLDQVEKELLRVAQLLKEPK 73
Query: 57 --------SFQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 108
++++K++++ + ++ S + NL+ LLAENG++ N G+I+ FS +M+
Sbjct: 74 LAASILNPHVKRAIKVKSIGDLTAREKLSPITTNLINLLAENGRLNNTPGIISAFSTMMS 133
Query: 109 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
HRG++P V TA L EA SEL++ L+ F K + + L K DPSI+G
Sbjct: 134 VHRGEVPCTVTTASALPEATLSELKTVLQSFLSKNQVLKLEVKTDPSIMG 183
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 94/134 (70%), Gaps = 3/134 (2%)
Query: 174 RSFSTS--QISQQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDV 231
RSFSTS + +LV+ P+Q++G +GRYATALYSAA+K +LD VEKEL+ Q LK +
Sbjct: 14 RSFSTSVARPFAKLVRPPIQIYGVEGRYATALYSAASKQNKLDQVEKELLRVAQLLK-EP 72
Query: 232 KFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIM 291
K +L+P +++++K++++ + ++ S + NL+ LLAENG++ N G+I+ FS +M
Sbjct: 73 KLAASILNPHVKRAIKVKSIGDLTAREKLSPITTNLINLLAENGRLNNTPGIISAFSTMM 132
Query: 292 AAHRGDLPVEVITA 305
+ HRG++P V TA
Sbjct: 133 SVHRGEVPCTVTTA 146
>sp|P22778|ATPO_IPOBA ATP synthase subunit O, mitochondrial OS=Ipomoea batatas PE=1 SV=1
Length = 244
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 95/172 (55%), Gaps = 20/172 (11%)
Query: 7 LARSFSTSQVS-QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSLK-- 63
L R+++T+ S +Q +K P+ ++G G YA+ALY AA K L+ VE EL ++ K
Sbjct: 41 LLRNYATASASKEQKIKVPLTMYGVSGNYASALYLAAVKSNTLEKVESELYDLVEASKKS 100
Query: 64 -----------------IEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSII 106
+ A+K + + F + N L +LAENG++K+ID ++ F +
Sbjct: 101 PTFSQFMRDPSVPVDTRVNAIKEICAQAKFGDTTQNFLLILAENGRLKHIDRIVKRFKEL 160
Query: 107 MAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
AHRG++ V T PL ++ EL++TL+ +G+++ + K+DP+I+G
Sbjct: 161 TMAHRGEVKATVTTVIPLPADEEKELKATLQEMVGQGKSVQIEQKIDPTILG 212
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Query: 171 KLARSFSTSQIS-QQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKT 229
+L R+++T+ S +Q +K P+ ++G G YA+ALY AA K L+ VE EL +A K
Sbjct: 40 ELLRNYATASASKEQKIKVPLTMYGVSGNYASALYLAAVKSNTLEKVESELYDLVEASKK 99
Query: 230 DVKFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSI 289
F F+ DP++ ++ A+K + + F + N L +LAENG++K+ID ++ F
Sbjct: 100 SPTFSQFMRDPSVPVDTRVNAIKEICAQAKFGDTTQNFLLILAENGRLKHIDRIVKRFKE 159
Query: 290 IMAAHRGDLPVEVIT 304
+ AHRG++ V T
Sbjct: 160 LTMAHRGEVKATVTT 174
>sp|Q96251|ATPO_ARATH ATP synthase subunit O, mitochondrial OS=Arabidopsis thaliana
GN=At5g13450 PE=1 SV=2
Length = 238
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 20/176 (11%)
Query: 3 SFRPLARSFSTSQVSQQL-VKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQKS 61
S P R+++T+ VK P+ + G +G +A+ LY AA K+ L+ +E +L ++
Sbjct: 28 SLFPALRTYATASAQTTANVKVPIALVGENGNFASWLYIAAVKMNSLEKIETDLSEMIEA 87
Query: 62 LK-------------------IEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINN 102
+K + A++ + F+ + N L+LLAENGK+KN+D ++
Sbjct: 88 MKTAPIFAQFTKDPSVPRGTRLAAIRDACDQAKFAEPTKNFLSLLAENGKLKNLDAIVKK 147
Query: 103 FSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
F + AHRGD+ V V T PL A++ EL TL+ G+ I + K+DPSI G
Sbjct: 148 FMQLTNAHRGDVKVLVTTVIPLPPAEEKELTETLQEIIGAGKKITVEQKIDPSIYG 203
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%)
Query: 186 VKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKS 245
VK P+ + G +G +A+ LY AA K+ L+ +E +L +A+KT F F DP++ +
Sbjct: 47 VKVPIALVGENGNFASWLYIAAVKMNSLEKIETDLSEMIEAMKTAPIFAQFTKDPSVPRG 106
Query: 246 LKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVIT 304
++ A++ + F+ + N L+LLAENGK+KN+D ++ F + AHRGD+ V V T
Sbjct: 107 TRLAAIRDACDQAKFAEPTKNFLSLLAENGKLKNLDAIVKKFMQLTNAHRGDVKVLVTT 165
>sp|Q7CWL8|ATPD_AGRT5 ATP synthase subunit delta OS=Agrobacterium tumefaciens (strain C58
/ ATCC 33970) GN=atpH PE=3 SV=3
Length = 188
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 24/152 (15%)
Query: 29 GTDG---RYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEA 66
GT G RYA++L+ A + ++ V+ EL F L + +A
Sbjct: 9 GTSGVAERYASSLFELALEAGTVEAVQVELDKFGALLDESDDLKRLVASPVFSAEDQFKA 68
Query: 67 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEE 126
+ + +K + ++N L ++A N ++ + G+I + I AAHRG++ EV +A L+E
Sbjct: 69 ISAICEKAGIAGLAVNFLKVVANNRRLFAVPGMIRAYRTIAAAHRGEITAEVTSAHALDE 128
Query: 127 ADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
A ++EL++ LK + G+++ ++ VDPSI+G
Sbjct: 129 AQETELKAALK--SVTGKDVAISVTVDPSILG 158
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 194 GTDG---RYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEA 250
GT G RYA++L+ A + ++ V+ EL F L + V P + +A
Sbjct: 9 GTSGVAERYASSLFELALEAGTVEAVQVELDKFGALLDESDDLKRLVASPVFSAEDQFKA 68
Query: 251 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ + +K + ++N L ++A N ++ + G+I + I AAHRG++ EV +A
Sbjct: 69 ISAICEKAGIAGLAVNFLKVVANNRRLFAVPGMIRAYRTIAAAHRGEITAEVTSAH 124
>sp|B3PQ71|ATPD_RHIE6 ATP synthase subunit delta OS=Rhizobium etli (strain CIAT 652)
GN=atpH PE=3 SV=2
Length = 188
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 21/149 (14%)
Query: 29 GTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEALKI 69
G RYA++L+ A + +D V +L FQ L +++A+
Sbjct: 12 GVAERYASSLFELALEHGAVDSVTADLDRFQAMLDESAELKRFVASPVFSAEDQLKAIVA 71
Query: 70 VGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEADK 129
+ ++ S N L ++A N ++ + G+I F +I A HRG++ EVI+A L +A +
Sbjct: 72 ISERAGISGFFANFLKVVARNRRLFALPGMIRAFRLIAANHRGEISAEVISAHALSQAQE 131
Query: 130 SELQSTLKLFAKKGENILLTTKVDPSIIG 158
+EL++ LK + G+++ ++ VDPSI+G
Sbjct: 132 TELKAALK--SVTGKDVTISVTVDPSILG 158
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 194 GTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEALKI 253
G RYA++L+ A + +D V +L FQ L + + FV P +++A+
Sbjct: 12 GVAERYASSLFELALEHGAVDSVTADLDRFQAMLDESAELKRFVASPVFSAEDQLKAIVA 71
Query: 254 VGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ ++ S N L ++A N ++ + G+I F +I A HRG++ EVI+A
Sbjct: 72 ISERAGISGFFANFLKVVARNRRLFALPGMIRAFRLIAANHRGEISAEVISAH 124
>sp|Q9P602|ATPO_NEUCR ATP synthase subunit 5, mitochondrial OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=atp-5 PE=3 SV=2
Length = 220
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Query: 174 RSFSTSQISQQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKF 233
R+++ + + VK PV +FG DG YATALY+AA K L+ K + S L D K
Sbjct: 19 RTYAAAAAASSKVKPPVTLFGLDGTYATALYTAAVKTSALEPTAKAISSLGNLLAKDPKL 78
Query: 234 RDFVLDPTIQKSLKIEALKIVGQKKNFSAASI-NLLALLAENGKIKNIDGVINNFSIIMA 292
+ PT+ + K + + + S ++ N LA LAEN ++ + V+ FS +M+
Sbjct: 79 ASILETPTLSPADKSAIVAELQKSVGVSNETVKNFLATLAENNRLGLLPSVVAKFSELMS 138
Query: 293 AHRGDLPVEVITAR 306
A RG++ + V +A+
Sbjct: 139 AARGEVEMVVTSAQ 152
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 22/172 (12%)
Query: 9 RSFSTSQVSQQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSLK----- 63
R+++ + + VK PV +FG DG YATALY+AA K L+ K + S L
Sbjct: 19 RTYAAAAAASSKVKPPVTLFGLDGTYATALYTAAVKTSALEPTAKAISSLGNLLAKDPKL 78
Query: 64 ---IEALKIVGQKKNFSAASI------------NLLALLAENGKIKNIDGVINNFSIIMA 108
+E + K+ A + N LA LAEN ++ + V+ FS +M+
Sbjct: 79 ASILETPTLSPADKSAIVAELQKSVGVSNETVKNFLATLAENNRLGLLPSVVAKFSELMS 138
Query: 109 AHRGDLPVEVITARPLEEADKSELQSTL--KLFAKKGENILLTTKVDPSIIG 158
A RG++ + V +A+PL+ + L+S + + G+ + +T KV+ IIG
Sbjct: 139 AARGEVEMVVTSAQPLDNKTLNRLESAVAKSPYVGSGKKLKVTNKVNADIIG 190
>sp|Q75EZ3|ATPO_ASHGO ATP synthase subunit 5, mitochondrial OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=ATP5 PE=3 SV=1
Length = 207
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 186 VKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKS 245
VK P+Q+FG +G YA+AL++AA+K ++ K L S + + D K + +P +
Sbjct: 18 VKPPIQLFGLEGTYASALFTAASKTTSIESAGKALASLSKTIAKDAKLGAILANPALPAG 77
Query: 246 LKIEALKIVGQKK-NFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVIT 304
+ ++ + QK AA NL+ +LAEN ++ + GV F+ + AH G + V T
Sbjct: 78 DRTVVVQTLAQKTPGMDAAVQNLMQVLAENNRLNLLQGVAGEFTKLTDAHNGLVQATVTT 137
Query: 305 AR 306
A+
Sbjct: 138 AQ 139
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 3 SFRPLARSFSTSQVSQQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL 62
S R RS + + ++ VK P+Q+FG +G YA+AL++AA+K ++ K L S K++
Sbjct: 2 SSRVFVRSLAAA--AKAGVKPPIQLFGLEGTYASALFTAASKTTSIESAGKALASLSKTI 59
Query: 63 KIEA-------------------LKIVGQKK-NFSAASINLLALLAENGKIKNIDGVINN 102
+A ++ + QK AA NL+ +LAEN ++ + GV
Sbjct: 60 AKDAKLGAILANPALPAGDRTVVVQTLAQKTPGMDAAVQNLMQVLAENNRLNLLQGVAGE 119
Query: 103 FSIIMAAHRGDLPVEVITARPLE-----EADKSELQSTLKLFAKKGENILLTTKVDPSII 157
F+ + AH G + V TA+PLE +K+ QS+ F G+ + L V P I
Sbjct: 120 FTKLTDAHNGLVQATVTTAQPLEGKLFRRVEKALAQSS---FIGAGKTLKLENVVKPEIQ 176
Query: 158 G 158
G
Sbjct: 177 G 177
>sp|O74479|ATPO_SCHPO ATP synthase subunit 5, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=atp5 PE=3 SV=2
Length = 216
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 22/169 (13%)
Query: 9 RSFSTSQVSQQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSLK----- 63
RS +T+ S PVQ++G DG YA++LY+AA K +LD VEK L L+
Sbjct: 21 RSLATATASAH---PPVQLYGLDGSYASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEF 77
Query: 64 ---IEALKIVGQKKNFSAASI-----------NLLALLAENGKIKNIDGVINNFSIIMAA 109
I + + + K +S+ N +L +N ++ + + FS +M A
Sbjct: 78 EQYISSPWLTREDKKILVSSLTQMTGNEPLLKNFYNVLLDNHRLYLLTRIQKQFSTLMRA 137
Query: 110 HRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
RG++ V++ +A PL+ S L+S + +L++ KV PSIIG
Sbjct: 138 KRGEIEVKITSATPLDSKILSRLESRIAKSKYGKGKLLVSNKVTPSIIG 186
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 174 RSFSTSQISQQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKF 233
RS +T+ S PVQ++G DG YA++LY+AA K +LD VEK L L+ +F
Sbjct: 21 RSLATATASAH---PPVQLYGLDGSYASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEF 77
Query: 234 RDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAA 293
++ P + + K + + Q N +L +N ++ + + FS +M A
Sbjct: 78 EQYISSPWLTREDKKILVSSLTQMTGNEPLLKNFYNVLLDNHRLYLLTRIQKQFSTLMRA 137
Query: 294 HRGDLPVEVITA 305
RG++ V++ +A
Sbjct: 138 KRGEIEVKITSA 149
>sp|O74190|ATPO_KLULA ATP synthase subunit 5, mitochondrial OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=ATP5 PE=3 SV=2
Length = 206
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%)
Query: 186 VKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKS 245
VK PVQ+FG DG YATAL++AA+K ++ L + ++ + D K + +P +
Sbjct: 18 VKPPVQLFGLDGTYATALFTAASKTTSVEAAASSLNALKETVAKDTKLTSILENPALSAE 77
Query: 246 LKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITA 305
+ + + +K N + NLL +LAEN ++ ++ V + FS + A+ G + V TA
Sbjct: 78 DRNIVVDTLSKKINLDQSVQNLLKVLAENNRLSLLEHVTSQFSKLTDAYHGLVQATVTTA 137
Query: 306 R 306
+
Sbjct: 138 Q 138
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 29/178 (16%)
Query: 5 RPLARSFSTSQVSQQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQKS--- 61
R RS + S ++ VK PVQ+FG DG YATAL++AA+K ++ L + +++
Sbjct: 4 RVFVRSMAAS--AKAGVKPPVQLFGLDGTYATALFTAASKTTSVEAAASSLNALKETVAK 61
Query: 62 ------------LKIEALKIV----GQKKNFSAASINLLALLAENGKIKNIDGVINNFSI 105
L E IV +K N + NLL +LAEN ++ ++ V + FS
Sbjct: 62 DTKLTSILENPALSAEDRNIVVDTLSKKINLDQSVQNLLKVLAENNRLSLLEHVTSQFSK 121
Query: 106 IMAAHRGDLPVEVITARPLE-----EADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
+ A+ G + V TA+PL+ +K+ S+L KG+++ L V P I G
Sbjct: 122 LTDAYHGLVQATVTTAQPLDSKLFKRVEKALAASSL---VGKGKSLKLENVVKPEIQG 176
>sp|B5ZSP0|ATPD_RHILW ATP synthase subunit delta OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=atpH PE=3 SV=1
Length = 188
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 21/149 (14%)
Query: 29 GTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEALKI 69
G RYA++L+ A + +D V +L FQ L +++A+
Sbjct: 12 GVAERYASSLFDLALEQGAVDSVTADLDRFQAMLDESADLKRFVASPVFSAEDQLKAIVA 71
Query: 70 VGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEADK 129
+ +K S N L ++A N ++ + G+I F II A HRG++ EV +A L +A +
Sbjct: 72 ISEKAGISGFFANFLKVVARNRRLFALPGMIKAFRIIAANHRGEISAEVTSAHALSQAQE 131
Query: 130 SELQSTLKLFAKKGENILLTTKVDPSIIG 158
+EL+ LK + G+++ + VDPSI+G
Sbjct: 132 TELKVALK--SVTGKDVTIAVTVDPSILG 158
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 194 GTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEALKI 253
G RYA++L+ A + +D V +L FQ L + FV P +++A+
Sbjct: 12 GVAERYASSLFDLALEQGAVDSVTADLDRFQAMLDESADLKRFVASPVFSAEDQLKAIVA 71
Query: 254 VGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ +K S N L ++A N ++ + G+I F II A HRG++ EV +A
Sbjct: 72 ISEKAGISGFFANFLKVVARNRRLFALPGMIKAFRIIAANHRGEISAEVTSAH 124
>sp|Q1MAY9|ATPD_RHIL3 ATP synthase subunit delta OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=atpH PE=3 SV=1
Length = 188
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 21/149 (14%)
Query: 29 GTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEALKI 69
G RYA++L+ A + +D V +L FQ L +++A+
Sbjct: 12 GVAERYASSLFELALEQGAVDSVTADLDHFQAMLDESADLKRFVASPVFSAEDQLKAIVA 71
Query: 70 VGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEADK 129
+ +K S N L ++A N ++ + G+I F II A HRG++ EV +A L +A +
Sbjct: 72 ISEKAGISGFFANFLKVVARNRRLFALPGMIKAFRIIAANHRGEISAEVTSAHALSQAQE 131
Query: 130 SELQSTLKLFAKKGENILLTTKVDPSIIG 158
+EL+ LK G+++ + VDPSI+G
Sbjct: 132 TELKVALK--GVTGKDVTIAVTVDPSILG 158
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 194 GTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEALKI 253
G RYA++L+ A + +D V +L FQ L + FV P +++A+
Sbjct: 12 GVAERYASSLFELALEQGAVDSVTADLDHFQAMLDESADLKRFVASPVFSAEDQLKAIVA 71
Query: 254 VGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ +K S N L ++A N ++ + G+I F II A HRG++ EV +A
Sbjct: 72 ISEKAGISGFFANFLKVVARNRRLFALPGMIKAFRIIAANHRGEISAEVTSAH 124
>sp|A5E947|ATPD_BRASB ATP synthase subunit delta OS=Bradyrhizobium sp. (strain BTAi1 /
ATCC BAA-1182) GN=atpH PE=3 SV=1
Length = 186
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEAL 67
V G GRYATAL+ A K +D V+ +L F L +++AL
Sbjct: 8 VSGVSGRYATALFELARDEKSVDAVKADLDKFNALLDESADLKRLVRSPVFGADVQLKAL 67
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
V K + + N+L +L N ++ + VI F+ ++A ++G+ +V A PL +
Sbjct: 68 NAVLDKAGIAGVAANVLRVLTANRRLFAVADVIRAFNALVAKYKGEATADVTVAEPLSDK 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
+ L+++LK G+++ L KVDP+IIG
Sbjct: 128 NLDALKASLKTVT--GKDVALNVKVDPAIIG 156
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
V G GRYATAL+ A K +D V+ +L F L + V P ++++AL
Sbjct: 8 VSGVSGRYATALFELARDEKSVDAVKADLDKFNALLDESADLKRLVRSPVFGADVQLKAL 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITA 305
V K + + N+L +L N ++ + VI F+ ++A ++G+ +V A
Sbjct: 68 NAVLDKAGIAGVAANVLRVLTANRRLFAVADVIRAFNALVAKYKGEATADVTVA 121
>sp|B9JBZ8|ATPD_AGRRK ATP synthase subunit delta OS=Agrobacterium radiobacter (strain K84
/ ATCC BAA-868) GN=atpH PE=3 SV=2
Length = 188
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 21/152 (13%)
Query: 26 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEA 66
+ G RYA++L+ A + + V +L FQ L ++ A
Sbjct: 9 HISGVAERYASSLFELALEEGAVPAVTADLDRFQAMLDDSGDLKRFISSPVFSAEEQVGA 68
Query: 67 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEE 126
++ + K F A N L ++A+N ++ + G++ F II A HRG++ E+ +A L +
Sbjct: 69 VQALATKAGFGAYFTNFLKVVAKNRRLFALPGMVKAFRIIAAQHRGEVSAEITSAHALTK 128
Query: 127 ADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
A ++EL++ LK G+++ + VDPSI+G
Sbjct: 129 AQENELKAALK--GVTGKDVAIAVTVDPSILG 158
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 191 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEA 250
+ G RYA++L+ A + + V +L FQ L + F+ P ++ A
Sbjct: 9 HISGVAERYASSLFELALEEGAVPAVTADLDRFQAMLDDSGDLKRFISSPVFSAEEQVGA 68
Query: 251 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
++ + K F A N L ++A+N ++ + G++ F II A HRG++ E+ +A
Sbjct: 69 VQALATKAGFGAYFTNFLKVVAKNRRLFALPGMVKAFRIIAAQHRGEVSAEITSAH 124
>sp|P09457|ATPO_YEAST ATP synthase subunit 5, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ATP5 PE=1 SV=1
Length = 212
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 189 PVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLK- 247
PV++FG +G YATALY AA K +D + L + +K + K +L+P + SLK
Sbjct: 26 PVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPAL--SLKD 83
Query: 248 ----IEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVI 303
I+A IV KN +NLL +L+EN ++ + + ++F ++ AH G L V
Sbjct: 84 RNSVIDA--IVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVT 141
Query: 304 TAR 306
+A
Sbjct: 142 SAE 144
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 26/159 (16%)
Query: 24 PVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSLK-------------------- 63
PV++FG +G YATALY AA K +D + L + ++K
Sbjct: 26 PVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRN 85
Query: 64 --IEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITA 121
I+A IV KN +NLL +L+EN ++ + + ++F ++ AH G L V +A
Sbjct: 86 SVIDA--IVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSA 143
Query: 122 RPLEEADKSELQSTLKL--FAKKGENILLTTKVDPSIIG 158
PL+ ++ L +G+++ L V P I G
Sbjct: 144 EPLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPEIKG 182
>sp|A6WXW8|ATPD_OCHA4 ATP synthase subunit delta OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=atpH PE=3 SV=1
Length = 186
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEAL 67
+ G RYA +L+ A K + VEK+L F+ L ++ A+
Sbjct: 8 ISGVAQRYAGSLFELALDAKSVAAVEKDLDRFEALLSGSEDLKRLISSPVFSSEDQLHAI 67
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
+ K N L ++A N ++ + G+I F I A HRG++ +VI+A L A
Sbjct: 68 GALADKAGIKGLVGNFLRVVARNRRLFALPGIIAAFRKIAAEHRGEVSADVISAHELSAA 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
++EL++TLK A G+++ + VDPSI+G
Sbjct: 128 QQNELKATLKGVA--GKDVTINVTVDPSILG 156
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
+ G RYA +L+ A K + VEK+L F+ L + + P ++ A+
Sbjct: 8 ISGVAQRYAGSLFELALDAKSVAAVEKDLDRFEALLSGSEDLKRLISSPVFSSEDQLHAI 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ K N L ++A N ++ + G+I F I A HRG++ +VI+A
Sbjct: 68 GALADKAGIKGLVGNFLRVVARNRRLFALPGIIAAFRKIAAEHRGEVSADVISAH 122
>sp|A4YKD7|ATPD_BRASO ATP synthase subunit delta OS=Bradyrhizobium sp. (strain ORS278)
GN=atpH PE=3 SV=2
Length = 186
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 21/152 (13%)
Query: 26 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEA 66
V G GRYATAL+ A K +D V+ +L F L +++A
Sbjct: 7 SVSGVSGRYATALFELARDEKSVDAVKADLDKFNALLDESADLKRLVRSPVFGADTQLKA 66
Query: 67 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEE 126
L V K + + N+L +L N ++ + VI F+ ++A ++G+ +V A P+ +
Sbjct: 67 LNAVLDKAGIAGVAANVLRVLTTNRRLFAVADVIRAFNALVAKYKGEATADVTVAEPISD 126
Query: 127 ADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
+ L++ LK G+++ L KVDP+IIG
Sbjct: 127 KNLDALKAALKTVT--GKDVALNVKVDPAIIG 156
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 191 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEA 250
V G GRYATAL+ A K +D V+ +L F L + V P +++A
Sbjct: 7 SVSGVSGRYATALFELARDEKSVDAVKADLDKFNALLDESADLKRLVRSPVFGADTQLKA 66
Query: 251 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITA 305
L V K + + N+L +L N ++ + VI F+ ++A ++G+ +V A
Sbjct: 67 LNAVLDKAGIAGVAANVLRVLTTNRRLFAVADVIRAFNALVAKYKGEATADVTVA 121
>sp|Q57B85|ATPD_BRUAB ATP synthase subunit delta OS=Brucella abortus biovar 1 (strain
9-941) GN=atpH PE=3 SV=1
Length = 186
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEAL 67
+ G RYA +L+ A + VEK+L F+ L ++ A+
Sbjct: 8 ISGVAQRYAGSLFEHALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A L A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
++EL++TLK A G+++ + VDPSI+G
Sbjct: 128 QQNELKATLKGVA--GKDVTINVTVDPSILG 156
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
+ G RYA +L+ A + VEK+L F+ L R + P ++ A+
Sbjct: 8 ISGVAQRYAGSLFEHALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAH 122
>sp|Q2YLI4|ATPD_BRUA2 ATP synthase subunit delta OS=Brucella abortus (strain 2308)
GN=atpH PE=3 SV=1
Length = 186
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEAL 67
+ G RYA +L+ A + VEK+L F+ L ++ A+
Sbjct: 8 ISGVAQRYAGSLFEHALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A L A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
++EL++TLK A G+++ + VDPSI+G
Sbjct: 128 QQNELKATLKGVA--GKDVTINVTVDPSILG 156
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
+ G RYA +L+ A + VEK+L F+ L R + P ++ A+
Sbjct: 8 ISGVAQRYAGSLFEHALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAH 122
>sp|B2S7M6|ATPD_BRUA1 ATP synthase subunit delta OS=Brucella abortus (strain S19) GN=atpH
PE=3 SV=1
Length = 186
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEAL 67
+ G RYA +L+ A + VEK+L F+ L ++ A+
Sbjct: 8 ISGVAQRYAGSLFEHALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A L A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
++EL++TLK A G+++ + VDPSI+G
Sbjct: 128 QQNELKATLKGVA--GKDVTINVTVDPSILG 156
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
+ G RYA +L+ A + VEK+L F+ L R + P ++ A+
Sbjct: 8 ISGVAQRYAGSLFEHALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAH 122
>sp|Q6FSD5|ATPO_CANGA ATP synthase subunit 5, mitochondrial OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=ATP5 PE=3 SV=1
Length = 207
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 186 VKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQ-K 244
VK PV++FG +G YA+AL++AA+K ++ L+ +K D K + + +P + K
Sbjct: 18 VKPPVKLFGVEGTYASALFTAASKETSVESASSSLVKLSSLIKEDAKLKHIMENPALSTK 77
Query: 245 SLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVIT 304
+ +V N +NLL +LAEN K+ D + + FSI+ AH G + V T
Sbjct: 78 DRAVVVDSLVKSSANLDKPVVNLLKVLAENNKLGLFDKISSQFSILNDAHNGLIRGSVTT 137
Query: 305 AR 306
A+
Sbjct: 138 AQ 139
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 22/160 (13%)
Query: 21 VKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSLKIEA-LK----------- 68
VK PV++FG +G YA+AL++AA+K ++ L+ +K +A LK
Sbjct: 18 VKPPVKLFGVEGTYASALFTAASKETSVESASSSLVKLSSLIKEDAKLKHIMENPALSTK 77
Query: 69 --------IVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVIT 120
+V N +NLL +LAEN K+ D + + FSI+ AH G + V T
Sbjct: 78 DRAVVVDSLVKSSANLDKPVVNLLKVLAENNKLGLFDKISSQFSILNDAHNGLIRGSVTT 137
Query: 121 ARPLEEADKSELQSTLKLFAKKGE--NILLTTKVDPSIIG 158
A+PL+ + L+ L+ + G+ + L V P I G
Sbjct: 138 AQPLDSKNFKRLEKALQQSSLVGQQKTLKLDNVVKPDIKG 177
>sp|Q8FYR2|ATPD_BRUSU ATP synthase subunit delta OS=Brucella suis biovar 1 (strain 1330)
GN=atpH PE=3 SV=1
Length = 186
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEAL 67
+ G RYA +L+ A + VEK+L F+ L ++ A+
Sbjct: 8 ISGVAQRYAGSLFELALDANSVASVEKDLGRFEALLSGSKDLRRLISSPVFSSEDQLHAI 67
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A L A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
++EL++TLK A G+++ + VDPSI+G
Sbjct: 128 QQNELKATLKGVA--GKDVTINVTVDPSILG 156
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
+ G RYA +L+ A + VEK+L F+ L R + P ++ A+
Sbjct: 8 ISGVAQRYAGSLFELALDANSVASVEKDLGRFEALLSGSKDLRRLISSPVFSSEDQLHAI 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAH 122
>sp|A9WWS5|ATPD_BRUSI ATP synthase subunit delta OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=atpH PE=3 SV=1
Length = 186
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEAL 67
+ G RYA +L+ A + VEK+L F+ L ++ A+
Sbjct: 8 ISGVAQRYAGSLFELALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A L A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
++EL++TLK A G+++ + VDPSI+G
Sbjct: 128 QQNELKATLKGVA--GKDVTINVTVDPSILG 156
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
+ G RYA +L+ A + VEK+L F+ L R + P ++ A+
Sbjct: 8 ISGVAQRYAGSLFELALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAH 122
>sp|A5VSE4|ATPD_BRUO2 ATP synthase subunit delta OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=atpH PE=3 SV=1
Length = 186
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEAL 67
+ G RYA +L+ A + VEK+L F+ L ++ A+
Sbjct: 8 ISGVAQRYAGSLFELALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A L A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
++EL++TLK A G+++ + VDPSI+G
Sbjct: 128 QQNELKATLKGVA--GKDVTINVTVDPSILG 156
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
+ G RYA +L+ A + VEK+L F+ L R + P ++ A+
Sbjct: 8 ISGVAQRYAGSLFELALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAH 122
>sp|A9M840|ATPD_BRUC2 ATP synthase subunit delta OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=atpH PE=3 SV=1
Length = 186
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEAL 67
+ G RYA +L+ A + VEK+L F+ L ++ A+
Sbjct: 8 ISGVAQRYAGSLFELALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A L A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
++EL++TLK A G+++ + VDPSI+G
Sbjct: 128 QQNELKATLKGVA--GKDVTINVTVDPSILG 156
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
+ G RYA +L+ A + VEK+L F+ L R + P ++ A+
Sbjct: 8 ISGVAQRYAGSLFELALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAH 122
>sp|Q3SVJ5|ATPD_NITWN ATP synthase subunit delta OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=atpH PE=3 SV=2
Length = 186
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 21/152 (13%)
Query: 26 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEA 66
V G GRYATAL+ A + K +D V+ +L F L + +A
Sbjct: 7 SVSGVSGRYATALFELAREDKSIDAVKADLDKFDAMLAESPELVRLVRSPVFSADTQSKA 66
Query: 67 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEE 126
L V K + N L +LA N ++ + VI F ++A +G+ EV A L +
Sbjct: 67 LAAVLSKAGIGGTTANFLKVLAANRRLFAVADVIRAFRALVAKFKGEATAEVTVAEKLND 126
Query: 127 ADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
+ L++ LK + G++I L KVDPSIIG
Sbjct: 127 KNLDALKAALK--SVTGKDITLNVKVDPSIIG 156
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 191 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEA 250
V G GRYATAL+ A + K +D V+ +L F L + V P + +A
Sbjct: 7 SVSGVSGRYATALFELAREDKSIDAVKADLDKFDAMLAESPELVRLVRSPVFSADTQSKA 66
Query: 251 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITA 305
L V K + N L +LA N ++ + VI F ++A +G+ EV A
Sbjct: 67 LAAVLSKAGIGGTTANFLKVLAANRRLFAVADVIRAFRALVAKFKGEATAEVTVA 121
>sp|B6JD05|ATPD_OLICO ATP synthase subunit delta OS=Oligotropha carboxidovorans (strain
ATCC 49405 / DSM 1227 / OM5) GN=atpH PE=3 SV=1
Length = 186
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEAL 67
V G GRYATAL+ A K +D V ++ F L + +AL
Sbjct: 8 VSGVAGRYATALFELARDQKSIDAVRADVDKFAALLADNPDLVRLVRSPVFTAQEQGKAL 67
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
V K + + N L +L N ++ ++ VI F ++A RG+ +V A PL +
Sbjct: 68 DAVLTKAGITGITANFLKVLTANRRLFAVNDVIRAFRALVAKFRGEATADVTVAEPLNDK 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
+ L+++LK + G+++ L KVDPSIIG
Sbjct: 128 NLDALKASLK--SVTGKDVDLNVKVDPSIIG 156
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
V G GRYATAL+ A K +D V ++ F L + V P + +AL
Sbjct: 8 VSGVAGRYATALFELARDQKSIDAVRADVDKFAALLADNPDLVRLVRSPVFTAQEQGKAL 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITA 305
V K + + N L +L N ++ ++ VI F ++A RG+ +V A
Sbjct: 68 DAVLTKAGITGITANFLKVLTANRRLFAVNDVIRAFRALVAKFRGEATADVTVA 121
>sp|Q2K3G7|ATPD_RHIEC ATP synthase subunit delta OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=atpH PE=3 SV=2
Length = 188
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 21/149 (14%)
Query: 29 GTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEALKI 69
G RYA++L+ A + +D V +L FQ L +++A+
Sbjct: 12 GVAERYASSLFELALEQGAVDSVTADLDRFQAMLDESAELKRFVASPVFSAEDQLKAIIA 71
Query: 70 VGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEADK 129
+ ++ S N L ++A N ++ + G+I F +I A HRG++ EV +A L +
Sbjct: 72 ISERAGISGFFANFLKVVARNRRLFALPGMIKAFRVIAANHRGEISAEVTSAHALTAEQE 131
Query: 130 SELQSTLKLFAKKGENILLTTKVDPSIIG 158
+EL++ LK G+++ + VDPSI+G
Sbjct: 132 NELKAALK--GVTGKDVAIAVTVDPSILG 158
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 194 GTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEALKI 253
G RYA++L+ A + +D V +L FQ L + + FV P +++A+
Sbjct: 12 GVAERYASSLFELALEQGAVDSVTADLDRFQAMLDESAELKRFVASPVFSAEDQLKAIIA 71
Query: 254 VGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARFWLTGHP 313
+ ++ S N L ++A N ++ + G+I F +I A HRG++ EV +A LT
Sbjct: 72 ISERAGISGFFANFLKVVARNRRLFALPGMIKAFRVIAANHRGEISAEVTSAH-ALTAEQ 130
Query: 314 SN 315
N
Sbjct: 131 EN 132
>sp|Q1QQS4|ATPD_NITHX ATP synthase subunit delta OS=Nitrobacter hamburgensis (strain X14
/ DSM 10229) GN=atpH PE=3 SV=2
Length = 186
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 26 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEA 66
V G GRYATAL+ A + K +D V+ +L F L + +A
Sbjct: 7 SVSGVSGRYATALFELAREDKSIDAVKADLDRFDAMLADSPELARLVRSPVFSADTQAKA 66
Query: 67 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEE 126
L V K F + L +L N ++ + VI F ++A +G++ EV A L +
Sbjct: 67 LAAVLDKAGFGGTTAKFLKVLTANRRLFAVTEVIRAFRALVARFKGEVTAEVTVAETLNK 126
Query: 127 ADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
+ L + LK + G++I L KVDPSIIG
Sbjct: 127 KNLDALTTALK--SVTGKDITLNVKVDPSIIG 156
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%)
Query: 191 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEA 250
V G GRYATAL+ A + K +D V+ +L F L + V P + +A
Sbjct: 7 SVSGVSGRYATALFELAREDKSIDAVKADLDRFDAMLADSPELARLVRSPVFSADTQAKA 66
Query: 251 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITA 305
L V K F + L +L N ++ + VI F ++A +G++ EV A
Sbjct: 67 LAAVLDKAGFGGTTAKFLKVLTANRRLFAVTEVIRAFRALVARFKGEVTAEVTVA 121
>sp|Q21CY4|ATPD_RHOPB ATP synthase subunit delta OS=Rhodopseudomonas palustris (strain
BisB18) GN=atpH PE=3 SV=2
Length = 186
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 21/152 (13%)
Query: 26 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEA 66
V G GRYATAL+ A K +D V+ +L F+ L + +A
Sbjct: 7 SVSGVSGRYATALFELARDEKAVDAVKADLDRFKAMLADSPELTRLVRSPVFSAETQSKA 66
Query: 67 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEE 126
L V K F+ + L +L N ++ + VI + ++A +G+ +V A PL E
Sbjct: 67 LAAVLDKAGFAGTTAKFLKVLTANRRLFTVTDVIRAYGALVAKFKGEATADVTVAEPLSE 126
Query: 127 ADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
+ L++ LK + G+++ L VDP+IIG
Sbjct: 127 KNLDALKTALK--SVTGKDVALNVNVDPAIIG 156
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 191 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEA 250
V G GRYATAL+ A K +D V+ +L F+ L + V P + +A
Sbjct: 7 SVSGVSGRYATALFELARDEKAVDAVKADLDRFKAMLADSPELTRLVRSPVFSAETQSKA 66
Query: 251 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITA 305
L V K F+ + L +L N ++ + VI + ++A +G+ +V A
Sbjct: 67 LAAVLDKAGFAGTTAKFLKVLTANRRLFTVTDVIRAYGALVAKFKGEATADVTVA 121
>sp|C3M9S4|ATPD_RHISN ATP synthase subunit delta OS=Rhizobium sp. (strain NGR234) GN=atpH
PE=3 SV=1
Length = 188
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 7 LARSFSTSQVSQQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELIS--FQKSLKI 64
+A +++S L V+ G D AL + LK+L ++S F +
Sbjct: 13 VAERYASSLFELALEAGSVEAVGADLDRVQALIDGSEDLKRL------VVSPVFSADDQF 66
Query: 65 EALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPL 124
+A+ + +K FS N L ++A N ++ + G I F +I A HRG++ +V +A L
Sbjct: 67 KAISALVEKFGFSGLVGNFLKVVARNRRLFALPGSIKAFRLIAARHRGEITADVTSAHAL 126
Query: 125 EEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
A ++EL++TLK G+++ + VDPSI+G
Sbjct: 127 TAAQETELKATLK--GVTGKDVAVNVTVDPSILG 158
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%)
Query: 194 GTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEALKI 253
G RYA++L+ A + ++ V +L Q + + V+ P + +A+
Sbjct: 12 GVAERYASSLFELALEAGSVEAVGADLDRVQALIDGSEDLKRLVVSPVFSADDQFKAISA 71
Query: 254 VGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ +K FS N L ++A N ++ + G I F +I A HRG++ +V +A
Sbjct: 72 LVEKFGFSGLVGNFLKVVARNRRLFALPGSIKAFRLIAARHRGEITADVTSAH 124
>sp|Q07UZ2|ATPD_RHOP5 ATP synthase subunit delta OS=Rhodopseudomonas palustris (strain
BisA53) GN=atpH PE=3 SV=1
Length = 186
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEAL 67
V G GRYATAL+ A K +D V+ +L F+ L + +AL
Sbjct: 8 VSGVAGRYATALFELARDQKSVDAVKADLDRFKAMLAESPDLTRLVRSPVFSADAQGKAL 67
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
V K + N L LL N ++ + VI F ++A +G+ +V A PL +
Sbjct: 68 VAVLAKAGIGGIAANFLQLLNANRRLFAVHDVIRAFGALVAKFKGEATADVTVAEPLNDQ 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
+ L+S LK + G+++ L VDP+IIG
Sbjct: 128 NLDALKSALK--SVTGKDVTLNVNVDPAIIG 156
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
V G GRYATAL+ A K +D V+ +L F+ L V P + +AL
Sbjct: 8 VSGVAGRYATALFELARDQKSVDAVKADLDRFKAMLAESPDLTRLVRSPVFSADAQGKAL 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITA 305
V K + N L LL N ++ + VI F ++A +G+ +V A
Sbjct: 68 VAVLAKAGIGGIAANFLQLLNANRRLFAVHDVIRAFGALVAKFKGEATADVTVA 121
>sp|Q8YJ38|ATPD_BRUME ATP synthase subunit delta OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=atpH PE=3 SV=1
Length = 186
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEAL 67
+ G R A +L+ A + VEK+L F+ L ++ A+
Sbjct: 8 ISGVAQRCAGSLFELALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A L A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
++EL++TLK A G+++ + VDPSI+G
Sbjct: 128 QQNELKATLKGVA--GKDVTINVTVDPSILG 156
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
+ G R A +L+ A + VEK+L F+ L R + P ++ A+
Sbjct: 8 ISGVAQRCAGSLFELALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAH 122
>sp|C0RF53|ATPD_BRUMB ATP synthase subunit delta OS=Brucella melitensis biotype 2 (strain
ATCC 23457) GN=atpH PE=3 SV=1
Length = 186
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEAL 67
+ G R A +L+ A + VEK+L F+ L ++ A+
Sbjct: 8 ISGVAQRCAGSLFELALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A L A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
++EL++TLK A G+++ + VDPSI+G
Sbjct: 128 QQNELKATLKGVA--GKDVTINVTVDPSILG 156
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
+ G R A +L+ A + VEK+L F+ L R + P ++ A+
Sbjct: 8 ISGVAQRCAGSLFELALDANSVASVEKDLGRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ K N L ++A+N ++ + G+I F I A HRG++ +V++A
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAH 122
>sp|B9JTR5|ATPD_AGRVS ATP synthase subunit delta OS=Agrobacterium vitis (strain S4 / ATCC
BAA-846) GN=atpH PE=3 SV=1
Length = 193
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 14 SQVSQQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL----------- 62
+ SQ + PV RYA++L+ A + +D V +L FQ +
Sbjct: 4 ADTSQPMSGQPVSAVAE--RYASSLFELAREAGSVDAVAGDLNRFQAMIDESVDLQRLVT 61
Query: 63 --------KIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDL 114
+ A+ + K N L L+A N ++ + G+I F +I A HRG+L
Sbjct: 62 SPAFTSEQQASAIAALCDKAEIGGLVGNFLKLVAANRRLFAVPGMIAAFRMIAARHRGEL 121
Query: 115 PVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
+V +A L A ++EL+ LK + G+ + + VDPS++G
Sbjct: 122 AADVTSAHALTPAQETELKEALK--SATGKTVTMFVTVDPSLLG 163
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 182 SQQLVKAPVQVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPT 241
SQ + PV RYA++L+ A + +D V +L FQ + V + V P
Sbjct: 7 SQPMSGQPVSAVAE--RYASSLFELAREAGSVDAVAGDLNRFQAMIDESVDLQRLVTSPA 64
Query: 242 IQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVE 301
+ A+ + K N L L+A N ++ + G+I F +I A HRG+L +
Sbjct: 65 FTSEQQASAIAALCDKAEIGGLVGNFLKLVAANRRLFAVPGMIAAFRMIAARHRGELAAD 124
Query: 302 VITAR 306
V +A
Sbjct: 125 VTSAH 129
>sp|B4RD44|ATPD_PHEZH ATP synthase subunit delta OS=Phenylobacterium zucineum (strain
HLK1) GN=atpH PE=3 SV=1
Length = 184
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 21/145 (14%)
Query: 33 RYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEALKIVGQK 73
RYA AL+ A++ K++ VE +L S + ++ K + L + K
Sbjct: 13 RYAQALFDLASEQKEVPAVEADLKSLKAAIADSRDLRVLLASPAFGADDKRKGLSAIADK 72
Query: 74 KNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEADKSELQ 133
F + L LLA NG+ + VI+ F + A RG + EV TA PL A L
Sbjct: 73 AKFKPTTKKFLGLLAANGRAAALPEVISAFERLAAEARGAVSAEVTTALPLSSAQAKGLA 132
Query: 134 STLKLFAKKGENILLTTKVDPSIIG 158
L+ G++ +TT+VDP+++G
Sbjct: 133 QALR--QALGKDPEITTRVDPALLG 155
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%)
Query: 198 RYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEALKIVGQK 257
RYA AL+ A++ K++ VE +L S + A+ R + P K + L + K
Sbjct: 13 RYAQALFDLASEQKEVPAVEADLKSLKAAIADSRDLRVLLASPAFGADDKRKGLSAIADK 72
Query: 258 KNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITA 305
F + L LLA NG+ + VI+ F + A RG + EV TA
Sbjct: 73 AKFKPTTKKFLGLLAANGRAAALPEVISAFERLAAEARGAVSAEVTTA 120
>sp|A7HT49|ATPD_PARL1 ATP synthase subunit delta OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=atpH PE=3 SV=1
Length = 194
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKEL--IS-----------------FQKSLKIEAL 67
V G GRYATAL+ A LD V +L IS F + +A
Sbjct: 16 VSGVAGRYATALFELADAEGALDAVAGDLERISAMLNESSDLVRLVRSPIFSAEDQTKAF 75
Query: 68 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
V +K S N + L+ N ++ + +I ++ ++A RG++ +V++A PL+ A
Sbjct: 76 GAVLEKAGISGLVKNFIGLVIRNRRLFGLSDMIGAYTTLLARKRGEMTADVVSAHPLQAA 135
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
L++ LK + G ++ + TKVD S++G
Sbjct: 136 QVESLKAALK--SATGRDVRINTKVDASLLG 164
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
V G GRYATAL+ A LD V +L L V P + +A
Sbjct: 16 VSGVAGRYATALFELADAEGALDAVAGDLERISAMLNESSDLVRLVRSPIFSAEDQTKAF 75
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARFWLTG 311
V +K S N + L+ N ++ + +I ++ ++A RG++ +V++A
Sbjct: 76 GAVLEKAGISGLVKNFIGLVIRNRRLFGLSDMIGAYTTLLARKRGEMTADVVSA------ 129
Query: 312 HP 313
HP
Sbjct: 130 HP 131
>sp|Q2J3I1|ATPD_RHOP2 ATP synthase subunit delta OS=Rhodopseudomonas palustris (strain
HaA2) GN=atpH PE=3 SV=1
Length = 186
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 26 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEA 66
V G GRYATAL+ A K +D V +L F+ L + +A
Sbjct: 7 SVSGVSGRYATALFELARDEKVVDAVTADLDKFKAMLADSPDLLRLVRSPVFGAEAQAKA 66
Query: 67 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEE 126
L V K + S N L LLA N ++ + VI + ++A +G+ +V A L +
Sbjct: 67 LGAVLDKAGITGISANFLKLLAANRRLFVVADVIRAYRALVAKFKGEATADVTVAETLGD 126
Query: 127 ADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
+ L++ LK A G+++ L VDP+IIG
Sbjct: 127 KNLEALKAALK--AVTGKDVTLNINVDPAIIG 156
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%)
Query: 191 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEA 250
V G GRYATAL+ A K +D V +L F+ L V P + +A
Sbjct: 7 SVSGVSGRYATALFELARDEKVVDAVTADLDKFKAMLADSPDLLRLVRSPVFGAEAQAKA 66
Query: 251 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITA 305
L V K + S N L LLA N ++ + VI + ++A +G+ +V A
Sbjct: 67 LGAVLDKAGITGISANFLKLLAANRRLFVVADVIRAYRALVAKFKGEATADVTVA 121
>sp|Q2VZM9|ATPD_MAGSA ATP synthase subunit delta OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=atpH PE=3 SV=1
Length = 184
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 21/145 (14%)
Query: 33 RYATALYSAATKLKQLDGVEKELISFQKSLK-------------------IEALKIVGQK 73
RYATAL+ A LD V +L + Q L+ +A+ V +
Sbjct: 12 RYATALFELADSSGSLDQVAGDLKTLQAMLRESADLRRVVDSPVLSRNDQGKAISAVAKA 71
Query: 74 KNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEADKSELQ 133
FS + L L A+N ++ + GVI ++ +AA RG+ V +A L A + L
Sbjct: 72 AGFSELTNKFLGLAAQNRRLHTLSGVIASYLGRLAARRGEKSATVASAVALSPAQQDALT 131
Query: 134 STLKLFAKKGENILLTTKVDPSIIG 158
+ LK A G N+ + KVDPS++G
Sbjct: 132 TALK--AAFGGNVAVDVKVDPSLLG 154
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 198 RYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEALKIVGQK 257
RYATAL+ A LD V +L + Q L+ R V P + ++ + +A+ V +
Sbjct: 12 RYATALFELADSSGSLDQVAGDLKTLQAMLRESADLRRVVDSPVLSRNDQGKAISAVAKA 71
Query: 258 KNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITA 305
FS + L L A+N ++ + GVI ++ +AA RG+ V +A
Sbjct: 72 AGFSELTNKFLGLAAQNRRLHTLSGVIASYLGRLAARRGEKSATVASA 119
>sp|Q98EV5|ATPD_RHILO ATP synthase subunit delta OS=Rhizobium loti (strain MAFF303099)
GN=atpH PE=3 SV=1
Length = 186
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 27 VFGTDGRYATALYSAATKLKQLDGVEKELISFQKSLK--------IEALKIVGQKK---- 74
+ G RYA +L+ A + + VE +L SF+ L I + G+++
Sbjct: 8 ISGVAERYAGSLFELALQANSVAKVESDLNSFEAMLAGSSDLTRLINSPVFSGEEQAKAI 67
Query: 75 -------NFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEA 127
+ + N L ++A N ++ + G+I F I A HRG+ EV +A L A
Sbjct: 68 AAIADKAGITGLTGNFLRVVARNRRLFAVPGMIKAFRQIAAEHRGETAAEVTSAHELTAA 127
Query: 128 DKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
++EL++ LK A G+++ ++ VDPS++G
Sbjct: 128 QQTELKAALKSVA--GKDVAISVTVDPSLLG 156
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 192 VFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEAL 251
+ G RYA +L+ A + + VE +L SF+ L + P + +A+
Sbjct: 8 ISGVAERYAGSLFELALQANSVAKVESDLNSFEAMLAGSSDLTRLINSPVFSGEEQAKAI 67
Query: 252 KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITAR 306
+ K + + N L ++A N ++ + G+I F I A HRG+ EV +A
Sbjct: 68 AAIADKAGITGLTGNFLRVVARNRRLFAVPGMIKAFRQIAAEHRGETAAEVTSAH 122
>sp|Q13DP5|ATPD_RHOPS ATP synthase subunit delta OS=Rhodopseudomonas palustris (strain
BisB5) GN=atpH PE=3 SV=1
Length = 186
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 26 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQKSL-------------------KIEA 66
V G GRYATAL+ A K +D V+ +L F L + +A
Sbjct: 7 SVSGVSGRYATALFELARDEKVIDAVKADLDKFSAMLVESPELLRLVRSPVFGAEAQTKA 66
Query: 67 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEE 126
L V K + S N L LLA N ++ + VI + ++A +G+ +V A L +
Sbjct: 67 LGAVLDKAGIAGISANFLKLLAANRRLFVVADVIGAYRALVARFKGEATADVTVAETLSD 126
Query: 127 ADKSELQSTLKLFAKKGENILLTTKVDPSIIG 158
+ L+ LK + G+++ L VDP+IIG
Sbjct: 127 KNLEALKLALK--SVTGKDVTLNINVDPAIIG 156
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 191 QVFGTDGRYATALYSAATKLKQLDGVEKELISFQQALKTDVKFRDFVLDPTIQKSLKIEA 250
V G GRYATAL+ A K +D V+ +L F L + V P + +A
Sbjct: 7 SVSGVSGRYATALFELARDEKVIDAVKADLDKFSAMLVESPELLRLVRSPVFGAEAQTKA 66
Query: 251 LKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITA 305
L V K + S N L LLA N ++ + VI + ++A +G+ +V A
Sbjct: 67 LGAVLDKAGIAGISANFLKLLAANRRLFVVADVIGAYRALVARFKGEATADVTVA 121
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,921,464
Number of Sequences: 539616
Number of extensions: 3921879
Number of successful extensions: 13612
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 12851
Number of HSP's gapped (non-prelim): 884
length of query: 317
length of database: 191,569,459
effective HSP length: 117
effective length of query: 200
effective length of database: 128,434,387
effective search space: 25686877400
effective search space used: 25686877400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)