BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4196
(168 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195447050|ref|XP_002071042.1| GK25347 [Drosophila willistoni]
gi|194167127|gb|EDW82028.1| GK25347 [Drosophila willistoni]
Length = 426
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 117/166 (70%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ +LREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 10 TGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVLLP-------------------- 49
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI E+GQKE
Sbjct: 50 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINELGQKEP 92
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+RD+KL E+L KSFP+VRVK LRPVVMAILRNT HIDDKYLR+LV
Sbjct: 93 RERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLRILV 138
>gi|195041727|ref|XP_001991305.1| GH12128 [Drosophila grimshawi]
gi|193901063|gb|EDV99929.1| GH12128 [Drosophila grimshawi]
Length = 598
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 117/166 (70%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ FLREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 11 TGLEDVNIPGQAFLREALTSCTDPLKAIESFQLENGVLLP-------------------- 50
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI ++GQKE
Sbjct: 51 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINDLGQKEP 93
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+RD+KL E+L KSFP+VRVK LRPVVMAILRNT HIDDKYLR+LV
Sbjct: 94 RERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLRILV 139
>gi|195353509|ref|XP_002043247.1| GM17461 [Drosophila sechellia]
gi|194127345|gb|EDW49388.1| GM17461 [Drosophila sechellia]
Length = 592
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 117/166 (70%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ +LREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 11 TGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVLLP-------------------- 50
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI E+GQKE
Sbjct: 51 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINEMGQKES 93
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+RD+KL E+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LV
Sbjct: 94 RERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILV 139
>gi|194896912|ref|XP_001978559.1| GG17612 [Drosophila erecta]
gi|190650208|gb|EDV47486.1| GG17612 [Drosophila erecta]
Length = 592
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 117/166 (70%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ +LREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 11 TGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVLLP-------------------- 50
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI E+GQKE
Sbjct: 51 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINEVGQKEP 93
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+RD+KL E+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LV
Sbjct: 94 RERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILV 139
>gi|195133298|ref|XP_002011076.1| GI16340 [Drosophila mojavensis]
gi|193907051|gb|EDW05918.1| GI16340 [Drosophila mojavensis]
Length = 587
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 117/166 (70%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ FLREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 10 TGLEDVNIPGQAFLREALTSCTDPLKAIESFQLENGVLLP-------------------- 49
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI ++GQKE
Sbjct: 50 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINDLGQKEP 92
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+RD+KL E+L KSFP+VRVK LRPVVMAILRNT HIDDKYLR+LV
Sbjct: 93 RERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLRILV 138
>gi|194763164|ref|XP_001963703.1| GF21119 [Drosophila ananassae]
gi|190618628|gb|EDV34152.1| GF21119 [Drosophila ananassae]
Length = 591
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 117/166 (70%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ +LREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 10 TGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVLLP-------------------- 49
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI ++GQKE
Sbjct: 50 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINDLGQKEA 92
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+RD+KL E+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LV
Sbjct: 93 RERDKKLKELLAKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILV 138
>gi|195398977|ref|XP_002058097.1| GJ15676 [Drosophila virilis]
gi|194150521|gb|EDW66205.1| GJ15676 [Drosophila virilis]
Length = 631
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 117/166 (70%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ FLREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 9 TGLEDVNIPGQAFLREALTSCTDPLKAIESFQLENGVLLP-------------------- 48
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI E+GQKE
Sbjct: 49 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINELGQKEP 91
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+R++KL E+L KSFP+VRVK LRPVVMAILRNT HIDDKYLR+LV
Sbjct: 92 REREKKLKELLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLRILV 137
>gi|195480393|ref|XP_002101246.1| GE17513 [Drosophila yakuba]
gi|194188770|gb|EDX02354.1| GE17513 [Drosophila yakuba]
Length = 595
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 117/166 (70%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ +LREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 11 TGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVLLP-------------------- 50
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI E+GQKE
Sbjct: 51 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINEMGQKEP 93
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+RD+KL E+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LV
Sbjct: 94 RERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILV 139
>gi|18857943|ref|NP_572402.1| NELF-B [Drosophila melanogaster]
gi|38372398|sp|Q9Y113.1|NELFB_DROME RecName: Full=Negative elongation factor B
gi|5052608|gb|AAD38634.1|AF145659_1 BcDNA.GH10333 [Drosophila melanogaster]
gi|7290825|gb|AAF46268.1| NELF-B [Drosophila melanogaster]
gi|220943838|gb|ACL84462.1| CG32721-PA [synthetic construct]
gi|220960322|gb|ACL92697.1| NELF-B-PA [synthetic construct]
Length = 594
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 117/166 (70%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ +LREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 13 TGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVLLP-------------------- 52
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI E+GQKE
Sbjct: 53 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINEMGQKEP 95
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+RD+KL E+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LV
Sbjct: 96 RERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILV 141
>gi|195163772|ref|XP_002022723.1| GL14601 [Drosophila persimilis]
gi|194104746|gb|EDW26789.1| GL14601 [Drosophila persimilis]
Length = 590
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 117/166 (70%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ +LREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 10 TGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVLLP-------------------- 49
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI E+GQKE
Sbjct: 50 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINELGQKEP 92
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+RD+KL E+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LV
Sbjct: 93 RERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILV 138
>gi|312373959|gb|EFR21621.1| hypothetical protein AND_16703 [Anopheles darlingi]
Length = 561
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/166 (62%), Positives = 115/166 (69%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLEE +PGQ FLR+AL+ C DPLKAIE FQL+NGILLP
Sbjct: 10 TGLEEVNVPGQAFLRDALSCCDDPLKAIENFQLENGILLP-------------------- 49
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH SVLEELRDKL++HI E+G KEG
Sbjct: 50 -----------------SLRPMLPLLDLHGVRRLDFHTSVLEELRDKLLAHINELGAKEG 92
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+RDRKL E+L KSFP+VRVKQLRPVVM ILRNT HIDDKYLR+LV
Sbjct: 93 RERDRKLKELLVKSFPVVRVKQLRPVVMCILRNTPHIDDKYLRILV 138
>gi|157106897|ref|XP_001649534.1| hypothetical protein AaeL_AAEL014752 [Aedes aegypti]
gi|108868768|gb|EAT32993.1| AAEL014752-PA [Aedes aegypti]
Length = 588
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 115/166 (69%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLEE +PGQ +LR+AL+ C DPLKAIE FQL+NGILLP
Sbjct: 10 TGLEEVNVPGQAYLRDALSCCDDPLKAIENFQLENGILLP-------------------- 49
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH SVLEELRDKL++HI E+G KEG
Sbjct: 50 -----------------SLRPMLPLLDLHGVRRLDFHTSVLEELRDKLIAHINEVGAKEG 92
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+RDRKL E+L KSFP+VRVK LRPVVM ILRNT+HIDDKYLR+LV
Sbjct: 93 RERDRKLKELLVKSFPVVRVKALRPVVMCILRNTSHIDDKYLRILV 138
>gi|195036506|ref|XP_001989711.1| GH18941 [Drosophila grimshawi]
gi|193893907|gb|EDV92773.1| GH18941 [Drosophila grimshawi]
Length = 592
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 117/166 (70%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ FLREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 10 TGLEDVNIPGQAFLREALTSCTDPLKAIESFQLENGVLLP-------------------- 49
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI E+GQK+
Sbjct: 50 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINELGQKDV 92
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+R++KL E+L KSFP+VRVK LRPVVMAILRNT HIDDKYLRVLV
Sbjct: 93 REREKKLKELLVKSFPVVRVKYLRPVVMAILRNTQHIDDKYLRVLV 138
>gi|195390466|ref|XP_002053889.1| GJ24126 [Drosophila virilis]
gi|194151975|gb|EDW67409.1| GJ24126 [Drosophila virilis]
Length = 592
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 117/166 (70%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ FLREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 10 TGLEDVNIPGQAFLREALTSCTDPLKAIESFQLENGVLLP-------------------- 49
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI E+GQK+
Sbjct: 50 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINELGQKDP 92
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+R++KL E+L KSFP+VRVK LRPVVMAILRNT HIDDKYLR+L+
Sbjct: 93 REREKKLKELLVKSFPVVRVKYLRPVVMAILRNTQHIDDKYLRILM 138
>gi|170053288|ref|XP_001862604.1| negative elongation factor B [Culex quinquefasciatus]
gi|167873859|gb|EDS37242.1| negative elongation factor B [Culex quinquefasciatus]
Length = 590
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 114/166 (68%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLEE +PGQ +LR+AL+ C DPLKAIE FQL+NGILLP
Sbjct: 10 TGLEEVNVPGQAYLRDALSCCDDPLKAIENFQLENGILLP-------------------- 49
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH SVLEELRDKL++HI E+G KEG
Sbjct: 50 -----------------SLRPMLPLLDLHGVRRLDFHTSVLEELRDKLIAHINELGAKEG 92
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+RDRKL E+L KSFP+VRVK LRPVVM ILRNT HIDDKYLR+LV
Sbjct: 93 RERDRKLKELLVKSFPVVRVKALRPVVMCILRNTAHIDDKYLRILV 138
>gi|125982768|ref|XP_001355154.1| GA17103 [Drosophila pseudoobscura pseudoobscura]
gi|54643467|gb|EAL32211.1| GA17103 [Drosophila pseudoobscura pseudoobscura]
Length = 590
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 116/166 (69%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ +LREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 10 TGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVLLP-------------------- 49
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI E+G KE
Sbjct: 50 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINELGHKEP 92
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+RD+KL E+L KSFP+VRVK LRPVVMAILRNT HIDDKYL++LV
Sbjct: 93 RERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILV 138
>gi|193627464|ref|XP_001951169.1| PREDICTED: negative elongation factor B-like [Acyrthosiphon pisum]
Length = 590
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 113/162 (69%), Gaps = 37/162 (22%)
Query: 6 ESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHNSVL 65
ESGI GQ +L E LT+CTDPLKAIEEFQ+DNGI LPS
Sbjct: 19 ESGIHGQTYLLETLTNCTDPLKAIEEFQVDNGIHLPS----------------------- 55
Query: 66 EVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRD 125
LRQMLPLLDLHG+RRLDFHNS+LE LRDKLV+HI+EIG+KEGRDRD
Sbjct: 56 --------------LRQMLPLLDLHGIRRLDFHNSILEALRDKLVAHIEEIGKKEGRDRD 101
Query: 126 RKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
RKL +ML KSFP V +KQLRP++MAIL+N +HIDDKYL VLV
Sbjct: 102 RKLKDMLAKSFPSVHIKQLRPIIMAILKNISHIDDKYLNVLV 143
>gi|195108555|ref|XP_001998858.1| GI24199 [Drosophila mojavensis]
gi|193915452|gb|EDW14319.1| GI24199 [Drosophila mojavensis]
Length = 595
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 117/166 (70%), Gaps = 37/166 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ IPGQ FLREALTSCTDPLKAIE FQL+NG+LLP
Sbjct: 10 TGLEDVNIPGQAFLREALTSCTDPLKAIESFQLENGVLLP-------------------- 49
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SLR MLPLLDLHGVRRLDFH S++EELRDKL++HI E+GQK+
Sbjct: 50 -----------------SLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINELGQKDP 92
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
R+R++KL ++L KSFP+VRVK LRPVVMAILRNT HIDDKYLRVL+
Sbjct: 93 REREKKLKDLLVKSFPVVRVKHLRPVVMAILRNTQHIDDKYLRVLM 138
>gi|357613673|gb|EHJ68645.1| hypothetical protein KGM_17840 [Danaus plexippus]
Length = 588
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 117/167 (70%), Gaps = 38/167 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GLE+ G+PGQ FLR+ALTSCTDPLKAIEEFQL+NGILLPSLR MLPLLDLHGVRRLDFH
Sbjct: 10 TGLEDVGVPGQTFLRDALTSCTDPLKAIEEFQLENGILLPSLRPMLPLLDLHGVRRLDFH 69
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SVLEELRDKL++HI E+G K+
Sbjct: 70 T-------------------------------------SVLEELRDKLIAHINEMGGKDR 92
Query: 122 -RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
++ ++KL E+L KSFP+V+VK LRPV+M+IL+NT HIDDKYLRVLV
Sbjct: 93 LKEHEKKLKELLNKSFPVVKVKALRPVIMSILKNTPHIDDKYLRVLV 139
>gi|380018067|ref|XP_003692958.1| PREDICTED: negative elongation factor B-like [Apis florea]
Length = 607
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 111/169 (65%), Gaps = 40/169 (23%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GL++ GIPGQ FLR+ALTSCTDPLKAIEEFQL+NGILLPSLR MLPLLDLHGVRRLDFH
Sbjct: 12 NGLDDLGIPGQGFLRDALTSCTDPLKAIEEFQLENGILLPSLRPMLPLLDLHGVRRLDFH 71
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK-- 119
SVLEELR+KL+ I EIG +
Sbjct: 72 -------------------------------------ASVLEELREKLIKRINEIGTERA 94
Query: 120 -EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
+G DR+L E+L KSFP VRV LRPVVM ILRNT HI+DKYLRVLV
Sbjct: 95 DKGSSGDRRLKELLSKSFPAVRVTALRPVVMCILRNTPHIEDKYLRVLV 143
>gi|350406456|ref|XP_003487776.1| PREDICTED: negative elongation factor B-like [Bombus impatiens]
Length = 603
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 110/169 (65%), Gaps = 40/169 (23%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GL++ GIPGQ FLR+ALTSCTDPLKAIEEFQL+NGILLP
Sbjct: 12 NGLDDLGIPGQGFLRDALTSCTDPLKAIEEFQLENGILLP-------------------- 51
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK-- 119
SLR MLPLLDLHGVRRLDFH SVLEELR+KL+ I EIG +
Sbjct: 52 -----------------SLRPMLPLLDLHGVRRLDFHASVLEELREKLIKRINEIGTERA 94
Query: 120 -EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
G DR+L E+L KSFP VRV LRPVVM ILRNT HI+DKYLRVLV
Sbjct: 95 DRGSAGDRRLKELLSKSFPAVRVAALRPVVMCILRNTPHIEDKYLRVLV 143
>gi|340716282|ref|XP_003396628.1| PREDICTED: negative elongation factor B-like [Bombus terrestris]
Length = 603
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 110/169 (65%), Gaps = 40/169 (23%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GL++ GIPGQ FLR+ALTSCTDPLKAIEEFQL+NGILLP
Sbjct: 12 NGLDDLGIPGQGFLRDALTSCTDPLKAIEEFQLENGILLP-------------------- 51
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK-- 119
SLR MLPLLDLHGVRRLDFH SVLEELR+KL+ I EIG +
Sbjct: 52 -----------------SLRPMLPLLDLHGVRRLDFHASVLEELREKLIKRINEIGTERA 94
Query: 120 -EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
G DR+L E+L KSFP VRV LRPVVM ILRNT HI+DKYLRVLV
Sbjct: 95 DRGSAGDRRLKELLSKSFPAVRVAALRPVVMCILRNTPHIEDKYLRVLV 143
>gi|383858421|ref|XP_003704700.1| PREDICTED: negative elongation factor B-like [Megachile rotundata]
Length = 607
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 111/169 (65%), Gaps = 40/169 (23%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GL++ GIPGQ FLR+ALTSCTDPLKAIEEFQL+NGILLPSLR MLPLLDLHGVRRLDFH
Sbjct: 12 NGLDDLGIPGQGFLRDALTSCTDPLKAIEEFQLENGILLPSLRPMLPLLDLHGVRRLDFH 71
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK-- 119
SVLEELR+KL+ I EIG +
Sbjct: 72 -------------------------------------ASVLEELREKLIKRINEIGTERA 94
Query: 120 -EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
+G D++L E+L KSFP VRV LRPVVM ILRNT HI+DKYLRVLV
Sbjct: 95 DKGSSGDKRLKELLSKSFPAVRVAALRPVVMCILRNTPHIEDKYLRVLV 143
>gi|91078954|ref|XP_974170.1| PREDICTED: similar to CG32721 CG32721-PA [Tribolium castaneum]
gi|270004158|gb|EFA00606.1| hypothetical protein TcasGA2_TC003481 [Tribolium castaneum]
Length = 587
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 110/164 (67%), Gaps = 37/164 (22%)
Query: 4 LEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHNS 63
LE I G FL+ ALTSCTDPLKAIEEFQ+ NGILL
Sbjct: 10 LEALNIHGPTFLKHALTSCTDPLKAIEEFQVTNGILL----------------------- 46
Query: 64 VLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRD 123
PSLR MLPLLDLHGVRRLDFH SV+EELR+KL++HI EIG++EGR+
Sbjct: 47 --------------PSLRPMLPLLDLHGVRRLDFHMSVVEELREKLIAHINEIGKQEGRE 92
Query: 124 RDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
RDRKL ++L KSFP+V+VK LRP+VMAIL+NT IDD YL++LV
Sbjct: 93 RDRKLKDLLVKSFPVVKVKALRPIVMAILKNTPQIDDNYLKILV 136
>gi|307212551|gb|EFN88274.1| Negative elongation factor B [Harpegnathos saltator]
Length = 607
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 110/168 (65%), Gaps = 40/168 (23%)
Query: 3 GLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHN 62
GLE+ GIPGQ +LR+ALTSCTDPLKAIEE+Q++NGILLPSLR MLPLLDLHGVRRLDFH
Sbjct: 13 GLEDLGIPGQAYLRDALTSCTDPLKAIEEYQMENGILLPSLRPMLPLLDLHGVRRLDFH- 71
Query: 63 SVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG---QK 119
SVLEELR+KL+ I EIG
Sbjct: 72 ------------------------------------ASVLEELREKLIKRINEIGLERAD 95
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
+ D++L E+L KSFP VRV QLRPVVMAILRNT HI++KYLRVLV
Sbjct: 96 KSASVDKRLKELLSKSFPAVRVAQLRPVVMAILRNTPHIEEKYLRVLV 143
>gi|242006948|ref|XP_002424304.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212507704|gb|EEB11566.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 574
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/166 (56%), Positives = 103/166 (62%), Gaps = 48/166 (28%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+ LEE IPGQ FLR+ALTSCTDPLKAIEEFQ
Sbjct: 10 TTLEEVNIPGQKFLRDALTSCTDPLKAIEEFQ---------------------------- 41
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
MLPLLDLHG+RRLDFH SVLEELR+KL++HI EIG KEG
Sbjct: 42 --------------------PMLPLLDLHGIRRLDFHTSVLEELREKLIAHINEIGHKEG 81
Query: 122 RDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
RDRDRKL ++L KSF LVR KQLRPVVM ILRNT HIDDKYL +LV
Sbjct: 82 RDRDRKLKDLLSKSFKLVRFKQLRPVVMCILRNTPHIDDKYLNILV 127
>gi|427784535|gb|JAA57719.1| Putative negative elongation factor b culex quinquefasciatus
negative elongation factor b [Rhipicephalus pulchellus]
Length = 600
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 115/168 (68%), Gaps = 37/168 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
M+GLEE GIPG+ FLREALT+C+DPL+AIEEFQ +NGILL
Sbjct: 1 MAGLEEVGIPGREFLREALTNCSDPLRAIEEFQEENGILL-------------------- 40
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
PSLR MLPLLDLHGV RL+FH SVLEEL+++L+ I+ +G++E
Sbjct: 41 -----------------PSLRPMLPLLDLHGVCRLEFHTSVLEELKERLLQQIENLGKQE 83
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
GR++++KL EML+KSFP+++V LRPVVM IL+N H+++KYL+ LVS
Sbjct: 84 GREKEKKLKEMLQKSFPVIKVPALRPVVMCILKNMEHVEEKYLKQLVS 131
>gi|158300525|ref|XP_320419.3| AGAP012109-PA [Anopheles gambiae str. PEST]
gi|157013201|gb|EAA00225.3| AGAP012109-PA [Anopheles gambiae str. PEST]
Length = 566
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/150 (58%), Positives = 99/150 (66%), Gaps = 37/150 (24%)
Query: 18 ALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHNSVLEVEVTETLNLLL 77
+L+ C DPLKAIE FQ++NGILLP
Sbjct: 4 SLSECDDPLKAIETFQVENGILLP------------------------------------ 27
Query: 78 PSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKKSFP 137
SLR MLPLLDLHGVRRLDFH SVLEELRDKL++HI E+G KEGR RD KL E+L KSFP
Sbjct: 28 -SLRPMLPLLDLHGVRRLDFHTSVLEELRDKLIAHINELGAKEGRQRDAKLKELLVKSFP 86
Query: 138 LVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
+VRVK LRPVVM ILRNT HI+DKYLR+LV
Sbjct: 87 VVRVKALRPVVMCILRNTPHIEDKYLRILV 116
>gi|405959404|gb|EKC25449.1| Negative elongation factor B [Crassostrea gigas]
Length = 568
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 100/163 (61%), Gaps = 37/163 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
M+GLEE GIPG FLRE+LT+C DPL AIEEFQ DNGILLP
Sbjct: 1 MAGLEELGIPGGEFLRESLTNCADPLAAIEEFQTDNGILLP------------------- 41
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
SLR LP +DLH ++RLDFH+SVLEELR++LV I ++ +
Sbjct: 42 ------------------SLRPALPFVDLHDIKRLDFHSSVLEELRERLVQQISDVASGD 83
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYL 163
+R +KL +L+KSFP+++VK LRPVVMAIL++ I D+YL
Sbjct: 84 NEERYKKLESLLEKSFPVIKVKSLRPVVMAILKHLPQIKDEYL 126
>gi|443688985|gb|ELT91507.1| hypothetical protein CAPTEDRAFT_172048 [Capitella teleta]
Length = 569
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 101/167 (60%), Gaps = 37/167 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
MSGLEE GIPG N LREALT+CTDPL AIE+FQL NGILLPSLR LP LDLHG+RRL+F
Sbjct: 1 MSGLEEVGIPGPNHLREALTNCTDPLTAIEDFQLQNGILLPSLRPSLPFLDLHGIRRLEF 60
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
H +++E+LRD+L+ + E+ K
Sbjct: 61 H-------------------------------------QAIMEDLRDRLLQRVSELAAKP 83
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
++ + LN++L KSFP+V VK LRPVV+ I+++ I +YL V+V
Sbjct: 84 DKNNLKTLNDLLTKSFPVVNVKSLRPVVLCIMQHLPKIKQEYLSVIV 130
>gi|321477825|gb|EFX88783.1| hypothetical protein DAPPUDRAFT_206529 [Daphnia pulex]
Length = 607
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 113/165 (68%), Gaps = 37/165 (22%)
Query: 3 GLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHN 62
GLE GIPG FLREALTSC+DPL+AIEEFQ++NGILLPSLR M+PLLDLHGV+RLDFH
Sbjct: 31 GLEVLGIPGGTFLREALTSCSDPLQAIEEFQVENGILLPSLRPMMPLLDLHGVKRLDFHI 90
Query: 63 SVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGR 122
SV+E LRDKL++ I ++GQKEG+
Sbjct: 91 SVMEA-------------------------------------LRDKLLAQIADLGQKEGK 113
Query: 123 DRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
++D+KL E+L KSF +V+ K LRPVVMA++++ +H+D+KYL+VLV
Sbjct: 114 EKDKKLKELLNKSFLVVKTKALRPVVMAVMKHLSHVDEKYLKVLV 158
>gi|291230864|ref|XP_002735387.1| PREDICTED: cofactor of BRCA1-like [Saccoglossus kowalevskii]
Length = 537
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 103/167 (61%), Gaps = 37/167 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
MSGLEE GI G ++LREALT+CTDPL AIEEFQ++NGILLP
Sbjct: 1 MSGLEEVGIAGGDYLREALTNCTDPLAAIEEFQVENGILLP------------------- 41
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
+L+ LPLLDLH + R +FH SVLE+LRDKL+ I E+ ++E
Sbjct: 42 ------------------TLQPALPLLDLHEIHRYEFHQSVLEQLRDKLLERINELSKQE 83
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
++ K+ E+L+KSFPL+R+ +RPVVM +++ + +KYL+VLV
Sbjct: 84 EKNSMAKIEELLEKSFPLIRIAAVRPVVMTLMKYMPEVPEKYLQVLV 130
>gi|391334290|ref|XP_003741538.1| PREDICTED: negative elongation factor B-like [Metaseiulus
occidentalis]
Length = 574
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 102/168 (60%), Gaps = 40/168 (23%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
M+GLEE IPG+ +L+E LT+C DPLKAI +FQ +NGILLP
Sbjct: 1 MAGLEEVDIPGREYLKETLTNCADPLKAIAQFQEENGILLP------------------- 41
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
SLR MLPLLDLHGV R +FH +V + LR++L+ I +G K+
Sbjct: 42 ------------------SLRTMLPLLDLHGVSRHEFHWAVQDALRERLLQQIDTLG-KQ 82
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
G KL E+L++SFP+V+V LRP+VMAIL+N H+D+++L+ LV+
Sbjct: 83 GNTA--KLEELLQRSFPVVKVDALRPIVMAILKNLEHVDERFLKQLVT 128
>gi|390350352|ref|XP_781074.3| PREDICTED: negative elongation factor B [Strongylocentrotus
purpuratus]
Length = 570
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 100/167 (59%), Gaps = 37/167 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
M+G EE GI G LREALT+CTDPL+AIE+FQ +NGILLP
Sbjct: 1 MAGFEEVGIAGSVHLREALTNCTDPLQAIEDFQSENGILLP------------------- 41
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
+L+ LPLLDLH ++R FH+S++EELR+KL+S +E+ + +
Sbjct: 42 ------------------TLQPALPLLDLHMIQRFAFHHSIMEELREKLMSRAQELAKSD 83
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
+ R + + ++L K FPL+RVK ++PVVM++++ I +KYL VLV
Sbjct: 84 TKGRFKTIEDLLSKCFPLIRVKSIQPVVMSVMKCLPKIPEKYLTVLV 130
>gi|198425385|ref|XP_002130034.1| PREDICTED: similar to cofactor of BRCA1 [Ciona intestinalis]
Length = 605
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 94/165 (56%), Gaps = 39/165 (23%)
Query: 3 GLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHN 62
LE+ GI G++FL+EALT+ TDPL AIEEFQ +N ILL
Sbjct: 4 ALEDMGIAGKSFLQEALTNTTDPLGAIEEFQQENSILL---------------------- 41
Query: 63 SVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGR 122
PSL+ LPLLDLH ++RLDFH SV E LRD L++ I EI ++ +
Sbjct: 42 ---------------PSLQPALPLLDLHDLKRLDFHQSVFEVLRDHLLNRITEISKE--K 84
Query: 123 DRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
D KLN +L+KSFP++++ L PV M +L++ + +KY+ VL
Sbjct: 85 DSSEKLNAILEKSFPVIKIDSLVPVSMCLLKHLPKVPEKYISVLT 129
>gi|348535182|ref|XP_003455080.1| PREDICTED: negative elongation factor B [Oreochromis niloticus]
Length = 583
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 97/168 (57%), Gaps = 37/168 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL E GI L+E LT+CT+PLKAI++FQ++NGILLP
Sbjct: 2 FAGLPELGISNGEDLKETLTNCTEPLKAIDQFQMENGILLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
+L+ LP LDLHG RL+FH SV +ELR+KL+ + I + +
Sbjct: 43 ------------------TLQSALPFLDLHGTPRLEFHQSVFDELREKLMERVVVIAEGK 84
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
DR RKL E+L+KSFPLV++ ++PVVM +L++ + +K L+++++
Sbjct: 85 EEDRYRKLEELLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKMVMA 132
>gi|432894423|ref|XP_004075986.1| PREDICTED: negative elongation factor B-like [Oryzias latipes]
Length = 583
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 96/168 (57%), Gaps = 37/168 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL E GI + L+E LT+CT+PLKAI++FQ++NGILLP
Sbjct: 2 FAGLSELGISNGDDLKETLTNCTEPLKAIDQFQMENGILLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
+L+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------TLQSALPFLDLHGTPRLEFHQSVFDELRDKLMERVAVIADGK 84
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
DR KL E+L+KSFPLV++ ++PVVM +L++ + +K L+++++
Sbjct: 85 EEDRYGKLEELLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKLVMA 132
>gi|37362200|gb|AAQ91228.1| cofactor of BRCA2 [Danio rerio]
Length = 594
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 94/168 (55%), Gaps = 37/168 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL E GI L+E LT+CT+PLKAI++FQ +NGILLP
Sbjct: 2 FAGLPELGISNGEDLKETLTNCTEPLKAIDQFQTENGILLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
+L+ LP LDLHG RL+FH SV +ELRDKL+ + I + +
Sbjct: 43 ------------------TLQSALPFLDLHGTPRLEFHQSVFDELRDKLMERVATIAEGK 84
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
DR KL E+L+KSFPLV++ ++PVVM +L++ + +K L+ +++
Sbjct: 85 EEDRYVKLEELLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKQVMA 132
>gi|410922192|ref|XP_003974567.1| PREDICTED: negative elongation factor B-like [Takifugu rubripes]
Length = 584
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 95/168 (56%), Gaps = 37/168 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL E GI + L+E LT+C DPLKAI++FQ++NGILLP
Sbjct: 2 FAGLPELGISNGDDLKETLTNCPDPLKAIDQFQMENGILLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
+L+ LP LDLHG RL+FH SV +ELR+ L+ + I + +
Sbjct: 43 ------------------TLQSALPFLDLHGTPRLEFHQSVFDELRENLMERVAVIAEGK 84
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
DR KL E+L+KSFPLV++ ++PVVM +L++ + +K L+++++
Sbjct: 85 EADRYSKLEELLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKIVMA 132
>gi|47213281|emb|CAF92133.1| unnamed protein product [Tetraodon nigroviridis]
Length = 850
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 37/168 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL E GI + L+E LT+C +PLKAI++FQ++NGILLP
Sbjct: 2 FAGLPELGISNGDDLKETLTNCAEPLKAIDQFQMENGILLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
+L+ LP LDLHG RL+FH SV +ELR+ L+ + I + +
Sbjct: 43 ------------------TLQSALPFLDLHGTPRLEFHQSVFDELRENLMERVAVIAEGK 84
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
DR KL E+L+KSFPLV++ ++PVVM +L++ + +K L+++++
Sbjct: 85 EADRYSKLEELLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKIVMA 132
>gi|327287348|ref|XP_003228391.1| PREDICTED: negative elongation factor B-like [Anolis carolinensis]
Length = 577
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL+E G+ L+E LT+CT+PLKAIE+FQ +NGILLP
Sbjct: 2 FAGLQELGVANGEDLKETLTNCTEPLKAIEQFQTENGILLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK- 119
+L+ LP LDLHG RL+FH SV +ELR+KL+ I I +
Sbjct: 43 ------------------TLQSALPFLDLHGTPRLEFHQSVFDELREKLLERISAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSFPLV++ ++PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFPLVKMPSIQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|41055805|ref|NP_956462.1| negative elongation factor B [Danio rerio]
gi|28279580|gb|AAH45409.1| Cofactor of BRCA1 [Danio rerio]
gi|182889114|gb|AAI64663.1| Cobra1 protein [Danio rerio]
Length = 583
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 37/168 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL E GI L+E LT+CT+P KAI++FQ +NGILLP
Sbjct: 2 FAGLPELGISNGEDLKETLTNCTEPHKAIDQFQTENGILLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
+L+ LP LDLHG RL+FH SV +ELRDKL+ + I + +
Sbjct: 43 ------------------TLQSALPFLDLHGTPRLEFHQSVFDELRDKLMERVATIAEGK 84
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
DR KL E+L+KSFPLV++ ++PVVM +L++ + +K L+ +++
Sbjct: 85 EEDRYVKLEELLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKQVMA 132
>gi|311246906|ref|XP_003122390.1| PREDICTED: negative elongation factor B [Sus scrofa]
Length = 580
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK- 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL E+L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEELLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|358422033|ref|XP_590381.5| PREDICTED: negative elongation factor B [Bos taurus]
Length = 970
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 38/168 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LL
Sbjct: 393 AGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLL--------------------- 431
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK-E 120
PSL+ LP LDLHG RL+FH SV +ELRDKL+ + I + +
Sbjct: 432 ----------------PSLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEGK 475
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 476 AEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 523
>gi|444521174|gb|ELV13115.1| Negative elongation factor B [Tupaia chinensis]
Length = 555
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QK 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K LR++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLRLVMA 133
>gi|359070746|ref|XP_002691742.2| PREDICTED: negative elongation factor B [Bos taurus]
Length = 969
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 38/168 (22%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LL
Sbjct: 392 AGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLL--------------------- 430
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK-E 120
PSL+ LP LDLHG RL+FH SV +ELRDKL+ + I + +
Sbjct: 431 ----------------PSLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEGK 474
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 475 AEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 522
>gi|431899055|gb|ELK07425.1| Negative elongation factor B [Pteropus alecto]
Length = 518
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 97/170 (57%), Gaps = 40/170 (23%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I E
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIA-SE 83
Query: 121 GR--DRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
GR +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 84 GRAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|165377254|ref|NP_001101287.2| negative elongation factor B [Rattus norvegicus]
gi|149039415|gb|EDL93635.1| similar to cofactor of BRCA1; negative elongation factor protein B
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 580
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK- 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|351705285|gb|EHB08204.1| Negative elongation factor B [Heterocephalus glaber]
Length = 570
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK- 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|348574450|ref|XP_003473003.1| PREDICTED: negative elongation factor B-like [Cavia porcellus]
Length = 580
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK- 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|165377251|ref|NP_067368.2| negative elongation factor B [Mus musculus]
gi|38372348|sp|Q8C4Y3.2|NELFB_MOUSE RecName: Full=Negative elongation factor B; Short=NELF-B; AltName:
Full=Cofactor of BRCA1
gi|148676262|gb|EDL08209.1| RIKEN cDNA A730008L03, isoform CRA_b [Mus musculus]
Length = 580
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK- 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|354503368|ref|XP_003513753.1| PREDICTED: negative elongation factor B [Cricetulus griseus]
gi|344251302|gb|EGW07406.1| Negative elongation factor B [Cricetulus griseus]
Length = 580
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK- 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|301781522|ref|XP_002926190.1| PREDICTED: negative elongation factor B-like [Ailuropoda
melanoleuca]
Length = 612
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QK 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|402895950|ref|XP_003911073.1| PREDICTED: negative elongation factor B [Papio anubis]
gi|380811504|gb|AFE77627.1| negative elongation factor B [Macaca mulatta]
gi|380811506|gb|AFE77628.1| negative elongation factor B [Macaca mulatta]
gi|383411247|gb|AFH28837.1| negative elongation factor B [Macaca mulatta]
gi|383411249|gb|AFH28838.1| negative elongation factor B [Macaca mulatta]
gi|384946300|gb|AFI36755.1| negative elongation factor B [Macaca mulatta]
gi|384946302|gb|AFI36756.1| negative elongation factor B [Macaca mulatta]
Length = 580
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK- 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|281345333|gb|EFB20917.1| hypothetical protein PANDA_015794 [Ailuropoda melanoleuca]
Length = 589
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK- 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|426363708|ref|XP_004048976.1| PREDICTED: negative elongation factor B [Gorilla gorilla gorilla]
Length = 580
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK- 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|73967426|ref|XP_548351.2| PREDICTED: negative elongation factor B isoform 1 [Canis lupus
familiaris]
Length = 580
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QK 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|355680306|gb|AER96503.1| cofactor of BRCA1 [Mustela putorius furo]
Length = 579
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK- 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERCKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|156351408|ref|XP_001622497.1| predicted protein [Nematostella vectensis]
gi|156209053|gb|EDO30397.1| predicted protein [Nematostella vectensis]
Length = 577
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 44/163 (26%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
M+G E +G+PG LR+AL++ +D IE FQ DNGILLP
Sbjct: 1 MAGFERAGLPGIEHLRQALSNSSDLAATIESFQHDNGILLP------------------- 41
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
SL+ LP LDLHGVRRLDFH+SV+E LR+ ++ +K++ +
Sbjct: 42 ------------------SLQSALPFLDLHGVRRLDFHSSVMEHLRESVLEKVKDLSTQ- 82
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYL 163
KL E+L++SFP + VK+LRPVV+A++++ I+D+ L
Sbjct: 83 ------KLEEILEQSFPFIHVKELRPVVVAVMKHLPKINDECL 119
>gi|20070260|ref|NP_056271.2| negative elongation factor B [Homo sapiens]
gi|38372378|sp|Q8WX92.1|NELFB_HUMAN RecName: Full=Negative elongation factor B; Short=NELF-B; AltName:
Full=Cofactor of BRCA1
gi|18448937|gb|AAL69965.1|AF464935_1 cofactor of BRCA1 [Homo sapiens]
gi|117645402|emb|CAL38167.1| hypothetical protein [synthetic construct]
gi|168273188|dbj|BAG10433.1| negative elongation factor B [synthetic construct]
gi|193786949|dbj|BAG52272.1| unnamed protein product [Homo sapiens]
gi|410225772|gb|JAA10105.1| cofactor of BRCA1 [Pan troglodytes]
gi|410251430|gb|JAA13682.1| cofactor of BRCA1 [Pan troglodytes]
gi|410302764|gb|JAA29982.1| cofactor of BRCA1 [Pan troglodytes]
gi|410354259|gb|JAA43733.1| cofactor of BRCA1 [Pan troglodytes]
Length = 580
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK- 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|397492274|ref|XP_003817052.1| PREDICTED: negative elongation factor B [Pan paniscus]
Length = 580
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QK 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|417411803|gb|JAA52327.1| Putative negative elongation factor b, partial [Desmodus rotundus]
Length = 590
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 12 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 52
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QK 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 53 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 94
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 95 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 143
>gi|345495124|ref|XP_001605692.2| PREDICTED: negative elongation factor B-like [Nasonia
vitripennis]
Length = 465
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 57/63 (90%)
Query: 4 LEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHNS 63
LE+ GIPGQ FL +ALTSC DPLKAIEEFQL+NGILLPSLR MLPLLDLHGV+RLDFH S
Sbjct: 14 LEDLGIPGQAFLSDALTSCNDPLKAIEEFQLENGILLPSLRPMLPLLDLHGVQRLDFHAS 73
Query: 64 VLE 66
VLE
Sbjct: 74 VLE 76
>gi|109109650|ref|XP_001087434.1| PREDICTED: negative elongation factor B isoform 2 [Macaca mulatta]
Length = 579
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QK 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|395844456|ref|XP_003794977.1| PREDICTED: negative elongation factor B [Otolemur garnettii]
Length = 685
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 107 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 147
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QK 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 148 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 189
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 190 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 238
>gi|126302653|ref|XP_001366988.1| PREDICTED: negative elongation factor B [Monodelphis domestica]
Length = 580
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 97/170 (57%), Gaps = 40/170 (23%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I E
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIA-TE 83
Query: 121 GR--DRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
G+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 84 GKVEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|410979603|ref|XP_003996171.1| PREDICTED: negative elongation factor B [Felis catus]
Length = 593
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QK 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 84
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 85 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|395506593|ref|XP_003757616.1| PREDICTED: negative elongation factor B [Sarcophilus harrisii]
Length = 523
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 97/170 (57%), Gaps = 40/170 (23%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 2 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 42
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I E
Sbjct: 43 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIA-AE 83
Query: 121 GR--DRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
G+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 84 GKVEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|441623899|ref|XP_003279885.2| PREDICTED: LOW QUALITY PROTEIN: negative elongation factor B
[Nomascus leucogenys]
Length = 928
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 40/169 (23%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLPSL+ LP LDLHG RL+FH
Sbjct: 361 AGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLPSLQSALPFLDLHGTPRLEFH 420
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SV +ELRDKL+ + I EG
Sbjct: 421 -------------------------------------QSVFDELRDKLLERVSAIAS-EG 442
Query: 122 RDRDRKLN--EMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R ++ ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 443 KAEERWVSGRDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 491
>gi|410043478|ref|XP_001136264.3| PREDICTED: negative elongation factor B [Pan troglodytes]
Length = 656
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 152 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 192
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QK 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 193 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 234
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 235 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 283
>gi|147901546|ref|NP_001089871.1| negative elongation factor complex member B [Xenopus laevis]
gi|80477195|gb|AAI08579.1| MGC131073 protein [Xenopus laevis]
Length = 577
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 94/170 (55%), Gaps = 40/170 (23%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL E G+ L+E LT+CT+PLKAIE+FQ++NG+LLPSL+ LP LDLH + R +F
Sbjct: 2 FAGLSELGVANGEELKETLTNCTEPLKAIEQFQIENGVLLPSLQSALPFLDLHSIPRYEF 61
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
H +VLEELRDKL+ + I E
Sbjct: 62 H-------------------------------------QTVLEELRDKLLERVTAIA-AE 83
Query: 121 GRDRDR--KLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
G+D R KL E+L+K F LV++ ++PVVM ++++ + +K L++++
Sbjct: 84 GKDGGRYGKLEELLEKCFALVKMPSIQPVVMCVMKHLPKVPEKKLKLVMG 133
>gi|296481987|tpg|DAA24102.1| TPA: cofactor of BRCA1 [Bos taurus]
Length = 799
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 221 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 261
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QK 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 262 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 303
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 304 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 352
>gi|395741251|ref|XP_002820475.2| PREDICTED: negative elongation factor B [Pongo abelii]
Length = 876
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 38/169 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL++ G+ L+E LT+CT+PLKAIE+FQ +NG+LLP
Sbjct: 298 FAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLP------------------- 338
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QK 119
SL+ LP LDLHG RL+FH SV +ELRDKL+ + I +
Sbjct: 339 ------------------SLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEG 380
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 381 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 429
>gi|57525238|ref|NP_001006202.1| negative elongation factor B [Gallus gallus]
gi|53129399|emb|CAG31384.1| hypothetical protein RCJMB04_5l5 [Gallus gallus]
Length = 577
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 40/169 (23%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GL+E G+ L+E LT+CT+PLKAIE+FQ +NG+LLPSL+ LP LDLHG RL+FH
Sbjct: 3 AGLQELGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLPSLQSALPFLDLHGTPRLEFH 62
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
SV +ELR+KL+ + I EG
Sbjct: 63 -------------------------------------QSVFDELREKLLERVSAIAL-EG 84
Query: 122 R--DRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ ++PVVM ++++ + +K L+++++
Sbjct: 85 KVEERYKKLEDLLEKSFSLVKMPSIQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|296191259|ref|XP_002743561.1| PREDICTED: negative elongation factor B [Callithrix jacchus]
Length = 851
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 91/162 (56%), Gaps = 38/162 (23%)
Query: 8 GIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHNSVLEV 67
G+ L+E LT+CT+PLKAIE+FQ +NG+LL
Sbjct: 280 GVANGEDLKETLTNCTEPLKAIEQFQTENGVLL--------------------------- 312
Query: 68 EVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QKEGRDRDR 126
PSL+ LP LDLHG RL+FH SV +ELRDKL+ + I + + +R +
Sbjct: 313 ----------PSLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEGKAEERYK 362
Query: 127 KLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 363 KLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 404
>gi|260828669|ref|XP_002609285.1| hypothetical protein BRAFLDRAFT_124742 [Branchiostoma floridae]
gi|229294641|gb|EEN65295.1| hypothetical protein BRAFLDRAFT_124742 [Branchiostoma floridae]
Length = 585
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 39/168 (23%)
Query: 2 SGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFH 61
+GL + GIPG LREAL++CTDP++AI+EFQ +N ILLPSL+ LPLLDLH V R DFH
Sbjct: 18 TGLTDLGIPGGEQLREALSTCTDPIRAIQEFQDENSILLPSLKPALPLLDLHSVNRFDFH 77
Query: 62 NSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEG 121
S++E L+D+L+ + + +
Sbjct: 78 -------------------------------------GSMVERLKDRLMQQVSSLVSERD 100
Query: 122 RDRDR--KLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
D + KL ML+K F ++ LRPVVM ++++ +I + YL+ L+
Sbjct: 101 TDAESKAKLEAMLEKCFLTIKNPTLRPVVMHVMKHINNIPEDYLKKLL 148
>gi|443720141|gb|ELU09957.1| hypothetical protein CAPTEDRAFT_189620, partial [Capitella teleta]
Length = 182
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 69/93 (74%)
Query: 75 LLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKK 134
+LLPSLR LP LDLHG+RRL+FH +++E+LRD+L+ + E+ K ++ + LN++L K
Sbjct: 51 ILLPSLRPSLPFLDLHGIRRLEFHQAIMEDLRDRLLQRVSELAAKPDKNNLKTLNDLLTK 110
Query: 135 SFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
SFP+V VK LRPVV+ I+++ I +YL V+V
Sbjct: 111 SFPVVNVKSLRPVVLCIMQHLPKIKQEYLSVIV 143
>gi|58332746|ref|NP_001011448.1| negative elongation factor complex member B [Xenopus (Silurana)
tropicalis]
gi|56970601|gb|AAH88538.1| hypothetical LOC496936 [Xenopus (Silurana) tropicalis]
Length = 576
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 36/168 (21%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
+GL E G+ L+E LT+CT+PLKAIE+FQ++NG+LLPSL+ LP LDLH + RL+F
Sbjct: 2 FAGLSELGVANGEELKETLTNCTEPLKAIEQFQIENGVLLPSLQSALPFLDLHSIPRLEF 61
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
H +VLE + L + V+ I G+
Sbjct: 62 HQTVLEELREKLL----------------------------------ERVTAIAAEGKDG 87
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
G R KL E+L+K F LV++ ++PVVM ++++ + +K L+++++
Sbjct: 88 G--RYGKLEELLEKCFALVKMPSIQPVVMCVMKHLPKVPEKKLKLVMA 133
>gi|47205967|emb|CAF91735.1| unnamed protein product [Tetraodon nigroviridis]
Length = 801
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 67/95 (70%)
Query: 74 NLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLK 133
+LLP+L+ LP LDLHG RL+FH SV +ELR+ L+ + I + + DR KL E+L+
Sbjct: 6 GILLPTLQSALPFLDLHGTPRLEFHQSVFDELRENLMERVAVIAEGKEADRYSKLEELLE 65
Query: 134 KSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
KSFPLV++ ++PVVM +L++ + +K L+++++
Sbjct: 66 KSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKIVMA 100
>gi|324517087|gb|ADY46723.1| Negative elongation factor B, partial [Ascaris suum]
Length = 401
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 37/165 (22%)
Query: 4 LEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHNS 63
LE GI G L+ LT+C+DP++ I+EFQ N I L +L+ L
Sbjct: 17 LENHGIDGSFRLKHLLTTCSDPIETIKEFQERNSIKLATLKSALK--------------- 61
Query: 64 VLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRD 123
LLDLH +RR +FH V+ ++ ++L++ ++ +G ++
Sbjct: 62 ----------------------LLDLHNIRRTEFHEMVIADMTERLLTKLRAVGASGTKE 99
Query: 124 RDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
KL + L+KSF L RV ++RPVV+ L+ + D+YL+V+V+
Sbjct: 100 SSIKLEQQLEKSFKLYRVPKIRPVVLETLKQLPKVPDRYLKVIVA 144
>gi|426225945|ref|XP_004007118.1| PREDICTED: negative elongation factor B [Ovis aries]
Length = 583
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 73/105 (69%), Gaps = 2/105 (1%)
Query: 66 EVEVTETLN-LLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QKEGRD 123
E ++T N +LLPSL+ LP LDLHG RL+FH SV +ELRDKL+ + I + + +
Sbjct: 59 EEPCSQTENGVLLPSLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEGKAEE 118
Query: 124 RDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 119 RYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 163
>gi|344308170|ref|XP_003422751.1| PREDICTED: negative elongation factor B, partial [Loxodonta
africana]
Length = 863
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 74 NLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIG-QKEGRDRDRKLNEML 132
+LLPSL+ LP LDLHG RL+FH SV +ELRDKL+ + I + + +R +KL ++L
Sbjct: 4 GVLLPSLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEGKAEERYKKLEDLL 63
Query: 133 KKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 64 EKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 99
>gi|440894521|gb|ELR46952.1| Negative elongation factor B, partial [Bos grunniens mutus]
Length = 532
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 74 NLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQK-EGRDRDRKLNEML 132
+LLPSL+ LP LDLHG RL+FH SV +ELRDKL+ + I + + +R +KL ++L
Sbjct: 4 GVLLPSLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIASEGKAEERYKKLEDLL 63
Query: 133 KKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 64 EKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 99
>gi|345326958|ref|XP_003431108.1| PREDICTED: LOW QUALITY PROTEIN: negative elongation factor B-like
[Ornithorhynchus anatinus]
Length = 553
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 72/102 (70%), Gaps = 4/102 (3%)
Query: 69 VTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGR--DRDR 126
+TE +LLPSL+ LP LDLHG RL+FH SV +ELRDKL+ + I EG+ +R +
Sbjct: 10 ITEN-GVLLPSLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIA-AEGKVEERYK 67
Query: 127 KLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
KL ++L+KSF LV++ ++PVVM ++++ + +K L+++++
Sbjct: 68 KLEDLLEKSFSLVKMPSIQPVVMCVMKHLPKVPEKKLKLVMA 109
>gi|326930226|ref|XP_003211251.1| PREDICTED: negative elongation factor B-like [Meleagris gallopavo]
Length = 593
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 83/151 (54%), Gaps = 40/151 (26%)
Query: 20 TSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHNSVLEVEVTETLNLLLPS 79
T+ D ++AIE+FQ +NG+LLPSL+ LP LDLHG RL+FH
Sbjct: 37 TALGDSVEAIEQFQTENGVLLPSLQSALPFLDLHGTPRLEFH------------------ 78
Query: 80 LRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGR--DRDRKLNEMLKKSFP 137
SV +ELR+KL+ + I EG+ +R +KL ++L+KSF
Sbjct: 79 -------------------QSVFDELREKLLERVSAIAL-EGKVEERYKKLEDLLEKSFS 118
Query: 138 LVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
LV++ ++PVVM ++++ + +K L+++++
Sbjct: 119 LVKMPSIQPVVMCVMKHLPKVPEKKLKLVMA 149
>gi|449477837|ref|XP_004177005.1| PREDICTED: LOW QUALITY PROTEIN: negative elongation factor B-like
[Taeniopygia guttata]
Length = 714
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 78/121 (64%), Gaps = 4/121 (3%)
Query: 51 DLHGVRRLDFHNSVLEVEVTETLN-LLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKL 109
+LHG V + +T N +LLPSL+ LP LDLHG RL+FH SV +ELR+KL
Sbjct: 151 ELHGAAEGHRAVPVPSAGLLQTENGVLLPSLQYALPFLDLHGTPRLEFHQSVFDELREKL 210
Query: 110 VSHIKEIGQKEGR--DRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
+ + I EG+ +R +KL ++L+KSF LV++ ++PVVM ++++ + +K L++++
Sbjct: 211 LERVSAIAL-EGKVEERYKKLEDLLEKSFSLVKMPSIQPVVMCVMKHLPKVPEKKLKLVM 269
Query: 168 S 168
+
Sbjct: 270 A 270
>gi|312071242|ref|XP_003138518.1| hypothetical protein LOAG_02933 [Loa loa]
Length = 360
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 37/168 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
++ LE I G LR L +C DP++ I+ FQ N I LP+L
Sbjct: 12 VTDLENQNIDGSRRLRHLLMTCVDPIETIKNFQERNSIKLPALN---------------- 55
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
P+LR LLDLH +RR +FH ++ D L++ IK++G
Sbjct: 56 -----------------PALR----LLDLHNIRRTEFHEEAANDISDLLLAKIKDLGATG 94
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ + L + L+KSF L RV +RP V+ L+ D+YL+V+V+
Sbjct: 95 TVESVQLLEKQLEKSFKLYRVPSIRPFVLETLKQLPKAPDRYLKVIVT 142
>gi|393910965|gb|EJD76108.1| negative elongation factor B [Loa loa]
Length = 667
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 37/168 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
++ LE I G LR L +C DP++ I+ FQ N I LP+L
Sbjct: 12 VTDLENQNIDGSRRLRHLLMTCVDPIETIKNFQERNSIKLPALN---------------- 55
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
P+LR LLDLH +RR +FH ++ D L++ IK++G
Sbjct: 56 -----------------PALR----LLDLHNIRRTEFHEEAANDISDLLLAKIKDLGATG 94
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ + L + L+KSF L RV +RP V+ L+ D+YL+V+V+
Sbjct: 95 TVESVQLLEKQLEKSFKLYRVPSIRPFVLETLKQLPKAPDRYLKVIVT 142
>gi|170589077|ref|XP_001899300.1| Negative elongation factor B homolog [Brugia malayi]
gi|158593513|gb|EDP32108.1| Negative elongation factor B homolog, putative [Brugia malayi]
Length = 610
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 37/168 (22%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
++ LE I G LR L +C DP++ I+ FQ N I LP+L
Sbjct: 12 VTDLENQNIDGSRRLRHLLMTCADPIETIKNFQERNSIKLPTLN---------------- 55
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
P+LR LLDLH +RR +FH + D L++ IK +G
Sbjct: 56 -----------------PALR----LLDLHNIRRTEFHEEAANNISDLLLAKIKSLGAAR 94
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ + L + L+KSF L RV +RP V+ L+ D+YL+V+V+
Sbjct: 95 TIESVQLLEKQLEKSFKLYRVPSIRPFVLETLKQLPKAPDRYLKVIVT 142
>gi|402591939|gb|EJW85868.1| hypothetical protein WUBG_03221 [Wuchereria bancrofti]
Length = 565
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%)
Query: 76 LLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKKS 135
+LP+L L LLDLH +RR +FH + D L++ IK +G + + L + L+KS
Sbjct: 1 MLPTLNPALRLLDLHNIRRTEFHEEAANNISDLLLAKIKNLGAARTVESVQLLEKQLEKS 60
Query: 136 FPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
F L RV +RP V+ L+ D+YL+V+V+
Sbjct: 61 FKLYRVPSIRPFVLETLKQLPKAPDRYLKVIVT 93
>gi|449674640|ref|XP_002167771.2| PREDICTED: negative elongation factor B-like [Hydra magnipapillata]
Length = 566
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 42/153 (27%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
MSG EESG+ G++ +R+ C +P I FQ +N +LL SL L LLDL V+R+ F
Sbjct: 1 MSGFEESGLAGKHSIRKGFKECREPEAFISTFQQENCVLLSSLHPALHLLDLQEVKRVVF 60
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKE 120
H SV+ +L +KL+ I
Sbjct: 61 H-------------------------------------QSVISDLSEKLIKRI-----NA 78
Query: 121 GRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILR 153
D+KL E++ + + V LRPV+M L+
Sbjct: 79 SDYNDQKLKELIDHTIQFIHVDALRPVIMTALK 111
>gi|50510833|dbj|BAD32402.1| mKIAA1182 protein [Mus musculus]
Length = 520
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 97 FHNSVLEELRDKLVSHIKEIGQK-EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNT 155
FH SV +ELRDKL+ + I + + +R +KL ++L+KSF LV++ L+PVVM ++++
Sbjct: 1 FHQSVFDELRDKLLERVSAIASEGKAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHL 60
Query: 156 THIDDKYLRVLVS 168
+ +K L+++++
Sbjct: 61 PKVPEKKLKLVMA 73
>gi|326431467|gb|EGD77037.1| hypothetical protein PTSG_07378 [Salpingoeca sp. ATCC 50818]
Length = 958
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 83 MLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKKSFPLVRVK 142
+LPL+D+ G R +FH S++ LR+ L+ I + Q+E L ++L ++FP V+ +
Sbjct: 88 LLPLIDIMGTTRAEFHESIMLHLRETLLKRIPSLSQEE-------LGKLLLQTFPYVQFE 140
Query: 143 QLRPVVMAILRNTTHIDDKYLRVL 166
+LRPV + IL I K LR L
Sbjct: 141 ELRPVTLRILNRYHSIPSKVLRHL 164
>gi|313226890|emb|CBY22035.1| unnamed protein product [Oikopleura dioica]
Length = 376
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 63 SVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGR 122
++ + E +NL+ SL LPLLDLH V R +F+ SV ++++ I + +K
Sbjct: 29 TIYDFEKQNRINLV--SLNPALPLLDLHNVTRNEFYQSVFDQMKLVFERRIDDFSKKSKE 86
Query: 123 DRDRKLNEMLKKSFPLVRVKQLRPVVMAIL 152
DR+ L ++L K+FPL L+P VM +L
Sbjct: 87 DRNDALLKILDKAFPLASDPLLQPFVMRML 116
>gi|313220434|emb|CBY31287.1| unnamed protein product [Oikopleura dioica]
Length = 376
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 63 SVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGR 122
++ + E +NL+ SL LPLLDLH V R +F+ SV ++++ I + +K
Sbjct: 29 TIYDFEKQNRINLV--SLNPALPLLDLHNVTRNEFYQSVFDQMKLVFERRIDDFSKKSKE 86
Query: 123 DRDRKLNEMLKKSFPLVRVKQLRPVVMAIL 152
DR+ L ++L K+FPL L+P VM +L
Sbjct: 87 DRNDALLKILDKAFPLASDPLLQPFVMRML 116
>gi|428177228|gb|EKX46109.1| hypothetical protein GUITHDRAFT_163104 [Guillardia theta CCMP2712]
Length = 518
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 44/160 (27%)
Query: 8 GIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHNSVLEV 67
G+ G N LRE L + DP AI+ F +N
Sbjct: 10 GVQGGNALRECLATAKDPRTAIKNFVSEN------------------------------- 38
Query: 68 EVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRK 127
+L PS LDL G+ R + H +L L+D+L+S + E ++K
Sbjct: 39 ------SLQTPSCSPAQEWLDLMGISRAEQHKEILTRLKDRLLSKV------ESMSTEKK 86
Query: 128 LNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
L +L+K FP + + +LR + + + N + YL L
Sbjct: 87 L-ALLEKCFPYISIPELRDIPLTLFSNLNKVPVSYLVTLA 125
>gi|340385850|ref|XP_003391421.1| PREDICTED: negative elongation factor B-like [Amphimedon
queenslandica]
Length = 457
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 1 MSGLEESGIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDF 60
M+ E+ ++ AL D L+AIE Q +N + +PS+ L LLDLHG+ R +
Sbjct: 1 MASSSEALFHPSKYVTRALKDSDDTLEAIETIQSENKVKIPSIHAALSLLDLHGISREET 60
Query: 61 HNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRL---DFHNSVLEELRDKLVSHIKEIG 117
H S+ + L +L + L LD ++RL F + + E+ ++ ++ +
Sbjct: 61 HRSLFKT--------LQENLTERLTSLDSKSIKRLLDKAFQYTSVPEICSVVMKMLETLS 112
Query: 118 QKEGRDRDRKL----NEMLKKSFPLV---RVKQLRPVVMA 150
++ D L E L P++ ++ QL P V
Sbjct: 113 AQQPIDEKYLLEIAEKEELYNDCPIIVKRQIWQLNPGVFG 152
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 77 LPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKKSF 136
+PS+ L LLDLHG+ R + H S+ + L++ L + + K + +L K+F
Sbjct: 40 IPSIHAALSLLDLHGISREETHRSLFKTLQENLTERLTSLDSK-------SIKRLLDKAF 92
Query: 137 PLVRVKQLRPVVMAILRNTTH---IDDKYL 163
V ++ VVM +L + ID+KYL
Sbjct: 93 QYTSVPEICSVVMKMLETLSAQQPIDEKYL 122
>gi|384487970|gb|EIE80150.1| hypothetical protein RO3G_04855 [Rhizopus delemar RA 99-880]
Length = 341
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 80 LRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKKSFPLV 139
+ M PLLD G RLD H + L+ L + V +I + + + ++ K+FP +
Sbjct: 42 IEHMYPLLDFCGYSRLDIHKACLDALNIETVKYI-----ESSSFQLEQFYDLFDKTFPYI 96
Query: 140 RVKQLRPVVMAILR 153
+ ++P+ MA+L+
Sbjct: 97 HIPLMQPIPMALLK 110
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%)
Query: 10 PGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHNSVLEVEV 69
P + +R L+ +P + I+ Q + G+ L + M PLLD G RLD H + L+
Sbjct: 9 PAEEDIRALLSQSREPSEVIKTIQKEYGLDLLGIEHMYPLLDFCGYSRLDIHKACLDALN 68
Query: 70 TETLNLLLPSLRQMLPLLDL 89
ET+ + S Q+ DL
Sbjct: 69 IETVKYIESSSFQLEQFYDL 88
>gi|330791263|ref|XP_003283713.1| hypothetical protein DICPUDRAFT_52489 [Dictyostelium purpureum]
gi|325086336|gb|EGC39727.1| hypothetical protein DICPUDRAFT_52489 [Dictyostelium purpureum]
Length = 757
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 41/149 (27%)
Query: 8 GIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHNSVLEV 67
G G + +L++ T PL+ I +FQ +NGI SL + P+L+L
Sbjct: 7 GNSGAEKILTSLSNTTYPLQFINQFQQENGISKKSLPTVTPVLNL--------------- 51
Query: 68 EVTETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRK 127
LDLH V R + + ++L L+ L++ I + + E
Sbjct: 52 -------------------LDLHQVPRGELYLNLLTSLKKDLLNKINTLNKSE------- 85
Query: 128 LNEMLKKSFPLVRVKQLRPVVMAILRNTT 156
L ++L+ SF + ++L+ + M ++R T
Sbjct: 86 LEKLLETSFAYISFEELQEIPMNVMRRLT 114
>gi|340385232|ref|XP_003391114.1| PREDICTED: negative elongation factor B-like, partial [Amphimedon
queenslandica]
Length = 458
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 84 LPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKKSFPLVRVKQ 143
L LLDLHG+ R + H S+ + L++ L + + K + +L K+F V +
Sbjct: 4 LSLLDLHGISREETHRSLFKTLQENLTERLTSLDSK-------SIKRLLDKAFQYTSVPE 56
Query: 144 LRPVVMAILRNTTH---IDDKYL 163
+ VVM +L + ID+KYL
Sbjct: 57 ICSVVMKMLETLSAQQPIDEKYL 79
>gi|358340803|dbj|GAA29716.2| negative elongation factor B [Clonorchis sinensis]
Length = 1147
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 76 LLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRK-----LNE 130
L+P+ Q L LLD+HGV R HN +L + D+L+ IK + + D D++ +
Sbjct: 30 LVPNFSQALKLLDIHGVPR---HN-ILWSINDRLLDAIKAGVEAKCEDPDQRKCQKLWQK 85
Query: 131 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
++K + +R ++M +L I ++++ ++V
Sbjct: 86 LIKTGMVYIHHPYMRALIMQVLGKMNAIKERHVNMIV 122
>gi|133777873|gb|AAI14765.1| COBRA1 protein [Bos taurus]
Length = 496
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 36/49 (73%)
Query: 120 EGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLVS 168
+ +R +KL ++L+KSF LV++ L+PVVM ++++ + +K L+++++
Sbjct: 1 KAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVMA 49
>gi|350644275|emb|CCD60973.1| hypothetical protein Smp_062920 [Schistosoma mansoni]
Length = 1315
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 76 LLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRK-----LNE 130
L+P+ Q L LLD+HGV R HN +L + D+L+ IK + D D+K +
Sbjct: 45 LVPNFSQALKLLDIHGVPR---HN-ILWSINDRLMDAIKARVDSKPDDCDQKKCQKLWQK 100
Query: 131 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
++K + +R ++M +L I ++++ ++V
Sbjct: 101 LIKTGIVYIHHPYMRSLIMQVLGKMNSIKERHVNLIV 137
>gi|281203778|gb|EFA77974.1| hypothetical protein PPL_08619 [Polysphondylium pallidum PN500]
Length = 1004
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 77 LPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKKSF 136
L S+ +L LLDLH + R ++S+L LRD ++ I+ + + L +L KSF
Sbjct: 637 LASVDPVLKLLDLHQITRSSLYHSLLVCLRDDMLVKIQSMNSTD-------LEMLLDKSF 689
Query: 137 PLVRVKQLRPVVMAILRNTTHI 158
P + ++L+ V M N +I
Sbjct: 690 PYIGFEELKAVPMNDDENIKYI 711
>gi|256052214|ref|XP_002569670.1| hypothetical protein [Schistosoma mansoni]
Length = 1117
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 76 LLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRK-----LNE 130
L+P+ Q L LLD+HGV R HN +L + D+L+ IK + D D+K +
Sbjct: 45 LVPNFSQALKLLDIHGVPR---HN-ILWSINDRLMDAIKGRVDSKPDDCDQKKCQKLWQK 100
Query: 131 MLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVLV 167
++K + +R ++M +L I ++++ ++V
Sbjct: 101 LIKTGIVYIHHPYMRSLIMQVLGKMNSIKERHVNLIV 137
>gi|66809827|ref|XP_638637.1| hypothetical protein DDB_G0284195 [Dictyostelium discoideum AX4]
gi|60467253|gb|EAL65286.1| hypothetical protein DDB_G0284195 [Dictyostelium discoideum AX4]
Length = 854
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 GQNFLREALTSCTDPLKAIEEFQLDNGI---LLPSLRQMLPLLDLHGVRRLDFH 61
G + +L++ T PL+ I +FQ +NGI LP++ +L LLDLH + R D +
Sbjct: 10 GSEKILTSLSTTTYPLQFISQFQQENGISKKSLPTVSPVLNLLDLHQIPRGDLY 63
>gi|301113414|ref|XP_002998477.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111778|gb|EEY69830.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1454
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 83 MLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKKSFPLVRVK 142
++ LLDL V R + ++S+LE+++ +++ I ++ Q E L +L+++FP + +
Sbjct: 93 VVQLLDLLQVPRSNMYHSLLEQMKKEMLLRIADLPQSE-------LPRVLEQTFPYIEFR 145
Query: 143 QLRPVVMAILRNTTHIDDKYLRVLV 167
+LR + +A+L + YLR L
Sbjct: 146 ELRAIPIAVLARQEDTPELYLRELT 170
>gi|348670178|gb|EGZ10000.1| hypothetical protein PHYSODRAFT_338700 [Phytophthora sojae]
Length = 1165
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 86 LLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKKSFPLVRVKQLR 145
LLDL V R + S+LE+++ +++ I ++ Q E L +L+++FP + ++LR
Sbjct: 95 LLDLLQVPRSSVYQSLLEQMKKEMLLRIADLPQSE-------LPRVLEQTFPYIEFRELR 147
Query: 146 PVVMAILRNTTHIDDKYLRVLV 167
+ +A+L + YLR L
Sbjct: 148 AIPIAVLARQEDTPELYLRELT 169
>gi|406898422|gb|EKD42022.1| hypothetical protein ACD_73C00377G0001, partial [uncultured
bacterium]
Length = 1006
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 24/118 (20%)
Query: 43 LRQMLPLLDLHGVR--RLDFHNSVLEVEVTETLNLLL--------PSLRQMLPLLDLHGV 92
L Q+LP L+ G+ + F N E ETL LL P L Q+ L+
Sbjct: 528 LIQLLPQLETMGINWNEISFKNG----EHPETLRALLKLKSTDYNPILAQVERLV----- 578
Query: 93 RRLDFHNSV-LEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKKSFPLVRVKQLRPVVM 149
+ F N V E +++L + EI + +G+DR ++NE++ KS P+ V L P++M
Sbjct: 579 --MQFSNHVSYPERKERLEKELGEILELKGKDRIDRMNELVAKSQPIFDV--LMPIMM 632
>gi|339243741|ref|XP_003377796.1| conserved hypothetical protein [Trichinella spiralis]
gi|316973358|gb|EFV56959.1| conserved hypothetical protein [Trichinella spiralis]
Length = 558
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 77 LPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKKSF 136
L SL L LL+ + +R+LD+H +++ LR+ ++ + + ++E D K+ + L +
Sbjct: 44 LQSLFDALRLLEQNPIRKLDYHETIMRRLREMILEQLNNV-KREHNGAD-KIEDFLSTYY 101
Query: 137 PLVRVKQLRPVVMAIL 152
LV + +R +++ ++
Sbjct: 102 ELVDLPTMRSLIIDVM 117
>gi|395815263|ref|XP_003781151.1| PREDICTED: putative polypeptide
N-acetylgalactosaminyltransferase-like protein 4
[Otolemur garnettii]
Length = 607
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 43 LRQMLPLLDLHGVRRLDFHNSVLEVE-----VTETLNLLLPSLRQMLPLLDLHGVRRLDF 97
L + LP L G R L F +S+ EV V E L++LL S+ + H ++ +
Sbjct: 132 LDRPLPDLRPSGCRNLSFPDSLPEVSIVFIFVNEALSVLLRSIHSAIERTPRHLLKEIIL 191
Query: 98 --HNSVLEELRDKLVSHIKEI-GQKEG 121
NS EEL++KL +++ ++ GQK G
Sbjct: 192 VDDNSSNEELKEKLTAYVDKVNGQKPG 218
>gi|325183619|emb|CCA18079.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 952
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 8 GIPGQNFLREALTSCTDPLKAIEEFQLDNGILLPSLRQMLPLLDLHGVRRLDFHN-SVLE 66
G G L+E L++ DP +AI +FQ + +P L L +R+ D S
Sbjct: 56 GAQGAIKLKELLSTAPDPGEAILQFQ--DSYSIPPLHSSRNLT----IRKNDTQEASKCA 109
Query: 67 VEVTETLN--------LLLPSLRQMLPLLDLHGVRRLDFHNSVLEELRDKLVSHIKEIGQ 118
E E + L + LL L V + + + +L+ L +L I ++ +
Sbjct: 110 SEYPEGITGAESRANAFNRQPLLSAIHLLSLLQVSKSEAYTFLLQSLLHELQLRITQLDE 169
Query: 119 KEGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTHIDDKYLRVL 166
++ L +L K+FP + ++LR +V+AIL H +L L
Sbjct: 170 QQ-------LQSLLDKTFPYIEFRELRSLVIAILSRQEHTPSIFLHQL 210
>gi|351705105|gb|EHB08024.1| Putative polypeptide N-acetylgalactosaminyltransferase-like protein
4, partial [Heterocephalus glaber]
Length = 523
Score = 35.4 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 43 LRQMLPLLDLHGVRRLDFHNSVLEVE-----VTETLNLLLPSLRQMLPLLDLHGVRRLDF 97
L + LP L G R L F NS+ EV V E L++LL S+ + H ++ +
Sbjct: 54 LNRPLPDLRPSGCRNLSFPNSLPEVSIVFIFVNEALSVLLRSIHSAIERTPSHLLKEIIL 113
Query: 98 --HNSVLEELRDKLVSHIKEI-GQKEG 121
NS EEL++KL ++ ++ QK G
Sbjct: 114 VDDNSSNEELKEKLTEYVDKVNSQKPG 140
>gi|195998830|ref|XP_002109283.1| hypothetical protein TRIADDRAFT_13686 [Trichoplax adhaerens]
gi|190587407|gb|EDV27449.1| hypothetical protein TRIADDRAFT_13686, partial [Trichoplax
adhaerens]
Length = 444
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 98 HNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKKSFPLVRVKQLRPVVMAILRNTTH 157
H S+++ LR +L ++ + KL ++L +FP + +K +RPV + I++
Sbjct: 2 HRSLIDALRKRLTEEVE-------KSNPEKLQQLLAVTFPSIHIKSIRPVCIEIMKRLPS 54
Query: 158 IDDKYLRVL 166
+ YL +L
Sbjct: 55 LPQNYLTLL 63
>gi|452842971|gb|EME44906.1| hypothetical protein DOTSEDRAFT_61526 [Dothistroma septosporum
NZE10]
Length = 686
Score = 35.4 bits (80), Expect = 8.8, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 15 LREALTSCT-DPLKAIEEFQL-DNGILLPSLRQMLPLLDL--HGVRRLDFHNSVLEVEVT 70
LR+AL T A+E+ L DNG+ +L Q+ P + L H V+ LD N+ ++VE
Sbjct: 134 LRKALEKGTYSSGIALEDLNLADNGVTTATLEQLAPAIKLACHDVKTLDLSNNAIQVESD 193
Query: 71 ETLNLLLPSLRQMLPLLDLHGVRRLDFHNSVL 102
E LR D +RRLD + L
Sbjct: 194 EQARQWHTFLRS---FGDCRKMRRLDLSGNPL 222
>gi|145496720|ref|XP_001434350.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401475|emb|CAK66953.1| unnamed protein product [Paramecium tetraurelia]
Length = 563
Score = 35.4 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 36 NGILLPSLRQMLPLLDLHGVRRLDFHNSVLEVEVTETLNLLLPSLRQMLPLLDLHGVRRL 95
N +LL S + + LD +R+L +S++ + V + L+ +++ D ++
Sbjct: 423 NLVLLMSYIECIEFLDASPLRKLITVSSLIHIAVQNKKHFLMYNIK------DNKVLQTA 476
Query: 96 DF-HNSVLEELRDKLVSHIKEIGQKEGRDRDRKLNEMLKKSFPLVRVKQLRPV 147
DF SV++ + D LV IKE+ +E R R +K+N + + S + Q PV
Sbjct: 477 DFIEASVVQAVYDALVEEIKEVTTQEERIRKQKINILTQLSKICFTLLQFNPV 529
>gi|297182339|gb|ADI18506.1| predicted exporters of the rnd superfamily [uncultured gamma
proteobacterium HF4000_19M20]
Length = 767
Score = 35.0 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 95 LDFHNSVLEELRD-KLVSHIKEIGQKEGRDRDRKLNEMLKKSFP 137
LD +NS+ ++ + KLV+ +KE+G E R D+K+NE L ++ P
Sbjct: 541 LDLNNSISQDKKSIKLVASLKEMGSLEYRKFDKKVNEYLLENMP 584
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.141 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,472,473,094
Number of Sequences: 23463169
Number of extensions: 94775067
Number of successful extensions: 291325
Number of sequences better than 100.0: 130
Number of HSP's better than 100.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 291052
Number of HSP's gapped (non-prelim): 232
length of query: 168
length of database: 8,064,228,071
effective HSP length: 128
effective length of query: 40
effective length of database: 9,355,909,735
effective search space: 374236389400
effective search space used: 374236389400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)