BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4197
(124 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307212781|gb|EFN88452.1| Mediator of RNA polymerase II transcription subunit 18
[Harpegnathos saltator]
Length = 221
Score = 193 bits (491), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 90/116 (77%), Positives = 104/116 (89%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK+RPTIVRSSID+A S TVVEFLTE+GC++DFEYI+RGYMFRKGRMK+ V+KIFKM+
Sbjct: 104 LGDKSRPTIVRSSIDIATSNTVVEFLTELGCKLDFEYIARGYMFRKGRMKVTVTKIFKMN 163
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
QGK G+EPISQSYLVELS+LAP G D I EDM+ FAEQL+PLVQLEKIDYKRL
Sbjct: 164 QGKMEGGGMEPISQSYLVELSVLAPSGHDAIAEDMRIFAEQLRPLVQLEKIDYKRL 219
>gi|242009649|ref|XP_002425595.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212509488|gb|EEB12857.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 227
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/115 (82%), Positives = 102/115 (88%), Gaps = 1/115 (0%)
Query: 4 GDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQ 63
GDK RPTIVRSSIDV S TVVEFLTE+GCRMDFEYI +GYMFRKGRMKI VSKIFKM Q
Sbjct: 107 GDKTRPTIVRSSIDVGTSSTVVEFLTELGCRMDFEYIVKGYMFRKGRMKITVSKIFKMGQ 166
Query: 64 GKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
KP ++ VEPISQSYLVELS+LAP GQD I EDM++FAEQLKPLVQLEKIDYKRL
Sbjct: 167 VKPPEN-VEPISQSYLVELSVLAPSGQDAIAEDMRSFAEQLKPLVQLEKIDYKRL 220
>gi|332027346|gb|EGI67430.1| Mediator of RNA polymerase II transcription subunit 18 [Acromyrmex
echinatior]
Length = 221
Score = 187 bits (475), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/116 (76%), Positives = 103/116 (88%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK+RPTIVRSSID+A S TVVEFLTE+GC++DFEY++RGYMFRKGRMKI VSKIFK++
Sbjct: 104 LGDKSRPTIVRSSIDIATSNTVVEFLTELGCKLDFEYVTRGYMFRKGRMKITVSKIFKVN 163
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
QGK + E ISQSYLVELS+LAP GQD I EDM+ FAEQL+PLVQLEKIDYKRL
Sbjct: 164 QGKVPEGVPEMISQSYLVELSVLAPSGQDAIAEDMRIFAEQLRPLVQLEKIDYKRL 219
>gi|91092028|ref|XP_969359.1| PREDICTED: similar to mediator complex [Tribolium castaneum]
gi|270004688|gb|EFA01136.1| hypothetical protein TcasGA2_TC010359 [Tribolium castaneum]
Length = 222
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/118 (77%), Positives = 103/118 (87%), Gaps = 3/118 (2%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK RPT+VRSSID+ACS T+VEFLTE+GCR+DFEYI+RGYMFRKGRMKI VSKIFKM
Sbjct: 102 LGDKNRPTVVRSSIDMACSSTIVEFLTELGCRVDFEYIARGYMFRKGRMKITVSKIFKMG 161
Query: 63 Q--GKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
KP + GVE ISQSYLVELS+LAP GQD I EDM+ FAEQL+PLVQLEKIDYKRL
Sbjct: 162 SMTSKPGE-GVEAISQSYLVELSVLAPSGQDAIAEDMRIFAEQLRPLVQLEKIDYKRL 218
>gi|307187927|gb|EFN72840.1| Mediator of RNA polymerase II transcription subunit 18 [Camponotus
floridanus]
Length = 221
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/116 (75%), Positives = 103/116 (88%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK+RPT+VRSSID+A S TVVEFLTE+GC++DFEY++RGYMFRKGRMKI VSKIFK++
Sbjct: 104 LGDKSRPTVVRSSIDIATSNTVVEFLTELGCKLDFEYVTRGYMFRKGRMKITVSKIFKVN 163
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
QGK + E ISQSYLVELS+LAP GQD I EDM+ FAEQL+PLVQLEKIDYKRL
Sbjct: 164 QGKVPEGVPEMISQSYLVELSVLAPSGQDAIAEDMRIFAEQLRPLVQLEKIDYKRL 219
>gi|383852250|ref|XP_003701641.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Megachile rotundata]
Length = 216
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/116 (75%), Positives = 100/116 (86%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK+RPTIVRSS+D+A S TVV+FLTE+GCR+DFEYI+RGYMFRKGRMK+ VSKIFKM
Sbjct: 99 LGDKSRPTIVRSSLDIATSNTVVDFLTELGCRLDFEYIARGYMFRKGRMKVTVSKIFKMG 158
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
Q +E ISQSYLVELS+LAP GQD I EDM+ FAEQLKPLVQLEKIDYKRL
Sbjct: 159 QQGKMPESMEAISQSYLVELSVLAPSGQDAIAEDMRIFAEQLKPLVQLEKIDYKRL 214
>gi|332374508|gb|AEE62395.1| unknown [Dendroctonus ponderosae]
Length = 221
Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/116 (75%), Positives = 99/116 (85%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK RPT+VRS ID+ACS T++EFLTE+GCR+DFEYI+RGYMFRKGRMK+ VSKIFKM+
Sbjct: 102 MGDKNRPTVVRSCIDMACSSTIIEFLTELGCRLDFEYIARGYMFRKGRMKVTVSKIFKMN 161
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
GVE ISQSYLVELS+ AP GQD I EDM+ FAEQLKPLVQLEKIDYKRL
Sbjct: 162 GMASKPEGVEAISQSYLVELSVQAPLGQDAIAEDMRVFAEQLKPLVQLEKIDYKRL 217
>gi|48095236|ref|XP_392263.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
[Apis mellifera]
gi|380013802|ref|XP_003690935.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Apis florea]
Length = 216
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/116 (75%), Positives = 100/116 (86%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK+RPTIVRSS+D+A S TVV+FLTE+GCR+DFEYI+RGYMFRKGRMK+ VSKIFKM
Sbjct: 99 LGDKSRPTIVRSSLDIATSNTVVDFLTELGCRLDFEYIARGYMFRKGRMKVTVSKIFKMG 158
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
Q +E ISQSYLVELS+LAP GQD I EDM+ FAEQLKPLVQLEKIDYKRL
Sbjct: 159 QQGKIPESMEAISQSYLVELSVLAPSGQDAIAEDMRIFAEQLKPLVQLEKIDYKRL 214
>gi|340711191|ref|XP_003394162.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Bombus terrestris]
Length = 216
Score = 183 bits (465), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 87/116 (75%), Positives = 99/116 (85%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK+RPTIVRSS+D+A S TVV+FLTE+GCR+DFEYI+RGYMFRKGRMK+ VSKIFKM
Sbjct: 99 LGDKSRPTIVRSSLDIATSSTVVDFLTELGCRLDFEYIARGYMFRKGRMKVTVSKIFKMG 158
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
Q +E ISQSYLVELS+LAP GQD I EDM+ FAEQLKPLVQLEKIDYKR
Sbjct: 159 QQGKIPESMEAISQSYLVELSVLAPSGQDAIAEDMRIFAEQLKPLVQLEKIDYKRF 214
>gi|350405730|ref|XP_003487531.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Bombus impatiens]
Length = 216
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/116 (75%), Positives = 99/116 (85%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK+RPTIVRSS+D+A S TVV+FLTE+GCR+DFEYI+RGYMFRKGRMK+ VSKIFKM
Sbjct: 99 LGDKSRPTIVRSSLDIATSNTVVDFLTELGCRLDFEYIARGYMFRKGRMKVTVSKIFKMG 158
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
Q +E ISQSYLVELS+LAP GQD I EDM+ FAEQLKPLVQLEKIDYKR
Sbjct: 159 QQGKIPESMEAISQSYLVELSVLAPSGQDAIAEDMRIFAEQLKPLVQLEKIDYKRF 214
>gi|322801940|gb|EFZ22487.1| hypothetical protein SINV_00845 [Solenopsis invicta]
Length = 229
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 102/116 (87%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK+RPTIVRSSIDVA S TVVEFLTE+GC++DFEYI+RGYMFRKGRMKI VSKIFK++
Sbjct: 106 LGDKSRPTIVRSSIDVATSNTVVEFLTELGCKLDFEYITRGYMFRKGRMKITVSKIFKVN 165
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
Q K ++ + ISQSYLVELS++AP GQD + EDM+ FAEQL+PLVQLEK+DYKR
Sbjct: 166 QTKVPENIPDMISQSYLVELSVVAPSGQDAVAEDMRIFAEQLRPLVQLEKVDYKRF 221
>gi|193627521|ref|XP_001944679.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Acyrthosiphon pisum]
Length = 224
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/117 (75%), Positives = 100/117 (85%), Gaps = 1/117 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFK-M 61
+GDK+RPTI+R+SIDVA + T+V+FLTEMG RMDFEYI RGYMFRKGRMKI VSKIFK M
Sbjct: 103 LGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMM 162
Query: 62 SQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
GKP+ V+PISQSYLVELS+LAP QD I EDM+ FAEQLKPLV LEK+DYKRL
Sbjct: 163 VVGKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRL 219
>gi|289742987|gb|ADD20241.1| uncharacterized conserved protein [Glossina morsitans morsitans]
Length = 213
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/114 (73%), Positives = 103/114 (90%), Gaps = 2/114 (1%)
Query: 5 DKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQG 64
D++RPT+VRSS+DV C+ TV+EFLTE+GCR+++EYIS+GYMFRKGRMKI V+KIFK+ G
Sbjct: 101 DRSRPTLVRSSLDVGCTSTVLEFLTELGCRLEYEYISQGYMFRKGRMKITVAKIFKIIPG 160
Query: 65 KPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
KP DS EP+ QSYLVELS++AP GQD IG++M+AFAEQLKPLVQLEKIDYKRL
Sbjct: 161 KPHDS--EPVCQSYLVELSVVAPNGQDSIGDEMRAFAEQLKPLVQLEKIDYKRL 212
>gi|345488095|ref|XP_003425834.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform 1 [Nasonia vitripennis]
gi|345488097|ref|XP_003425835.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform 2 [Nasonia vitripennis]
Length = 217
Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/115 (73%), Positives = 99/115 (86%), Gaps = 1/115 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK++PT+VRSS+D+A S TVVEFL E+GCR+DFEYI RGYMFRKGRMK+ VSKIFKM+
Sbjct: 102 LGDKSQPTVVRSSLDIATSSTVVEFLNELGCRLDFEYIIRGYMFRKGRMKVTVSKIFKMN 161
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKR 117
Q K DS +E ISQSYLVELS+LAP GQ I ED++ FAEQLKPLVQLEKI+Y R
Sbjct: 162 QAKIPDS-MEAISQSYLVELSVLAPSGQTAIAEDIRIFAEQLKPLVQLEKINYIR 215
>gi|170039020|ref|XP_001847344.1| mediator complex [Culex quinquefasciatus]
gi|167862653|gb|EDS26036.1| mediator complex [Culex quinquefasciatus]
Length = 214
Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/116 (71%), Positives = 97/116 (83%), Gaps = 7/116 (6%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GD+ RPT+VRSS+D+ACS VV+FLTEMG R+DFEYI++GYMFRKGRMK+ VSKIFK++
Sbjct: 102 LGDRTRPTLVRSSLDIACSPHVVDFLTEMGFRVDFEYITKGYMFRKGRMKVTVSKIFKVN 161
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
EPISQSYLVELS+LAP GQD I EDM+ FAEQLKPLVQLEKIDYKR
Sbjct: 162 SA-------EPISQSYLVELSVLAPTGQDAIAEDMRIFAEQLKPLVQLEKIDYKRF 210
>gi|357617379|gb|EHJ70756.1| hypothetical protein KGM_03390 [Danaus plexippus]
Length = 222
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/116 (70%), Positives = 100/116 (86%), Gaps = 3/116 (2%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK RPT+VRSS+D+ACS ++EFL E+GCR++FEY +GYMFRKGRMKI V+K+FK+S
Sbjct: 104 LGDKNRPTVVRSSLDIACSGMLIEFLNELGCRIEFEYSVKGYMFRKGRMKITVAKVFKIS 163
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
Q S EPISQSYLVELS+LAP GQD IGEDM+AFA+QL+PLVQL+KIDYKRL
Sbjct: 164 Q---SSMPPEPISQSYLVELSVLAPQGQDAIGEDMRAFADQLRPLVQLDKIDYKRL 216
>gi|157127945|ref|XP_001661240.1| mediator complex, subunit, putative [Aedes aegypti]
gi|121957211|sp|Q17IN5.1|MED18_AEDAE RecName: Full=Mediator of RNA polymerase II transcription subunit
18; AltName: Full=Mediator complex subunit 18
gi|108882300|gb|EAT46525.1| AAEL002284-PA [Aedes aegypti]
Length = 215
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/116 (70%), Positives = 98/116 (84%), Gaps = 7/116 (6%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GD+ RPT+VRSS+D+AC+ VV+FLTEMG R+DFEYI++GYMFRKGRMK+ VSKIFK++
Sbjct: 103 LGDRNRPTLVRSSLDIACTPHVVDFLTEMGFRVDFEYITKGYMFRKGRMKVTVSKIFKVN 162
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
EPISQSYLVELS+LAP GQDVI +DM+ FAEQLKPLVQLEKIDYKR
Sbjct: 163 SS-------EPISQSYLVELSVLAPTGQDVIADDMRIFAEQLKPLVQLEKIDYKRF 211
>gi|158287861|ref|XP_309758.4| AGAP010936-PA [Anopheles gambiae str. PEST]
gi|157019392|gb|EAA05528.4| AGAP010936-PA [Anopheles gambiae str. PEST]
Length = 213
Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/116 (68%), Positives = 94/116 (81%), Gaps = 8/116 (6%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GD+ RPT+VRSS+D+AC+ V++FLTEMG R+DFEY ++GYMFRKGRMKI VSKI K
Sbjct: 102 LGDRTRPTLVRSSLDIACTPHVIDFLTEMGFRLDFEYSTKGYMFRKGRMKITVSKILK-- 159
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+ EPISQSYLVELS+LAP GQD I EDM+ FAEQLKPLVQLEKIDYKR
Sbjct: 160 ------NMTEPISQSYLVELSVLAPKGQDAIAEDMRIFAEQLKPLVQLEKIDYKRF 209
>gi|158563993|sp|Q7QGX9.3|MED18_ANOGA RecName: Full=Mediator of RNA polymerase II transcription subunit
18; AltName: Full=Mediator complex subunit 18
Length = 211
Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/116 (68%), Positives = 94/116 (81%), Gaps = 8/116 (6%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GD+ RPT+VRSS+D+AC+ V++FLTEMG R+DFEY ++GYMFRKGRMKI VSKI K
Sbjct: 100 LGDRTRPTLVRSSLDIACTPHVIDFLTEMGFRLDFEYSTKGYMFRKGRMKITVSKILK-- 157
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+ EPISQSYLVELS+LAP GQD I EDM+ FAEQLKPLVQLEKIDYKR
Sbjct: 158 ------NMTEPISQSYLVELSVLAPKGQDAIAEDMRIFAEQLKPLVQLEKIDYKRF 207
>gi|194763325|ref|XP_001963783.1| GF21201 [Drosophila ananassae]
gi|190618708|gb|EDV34232.1| GF21201 [Drosophila ananassae]
Length = 217
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 96/114 (84%)
Query: 5 DKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQG 64
D+ RPT+VRS +D AC+ ++EFLTEMG R++FEYI++GYMFRKGRMKI VSK+ K+ G
Sbjct: 100 DQRRPTLVRSCMDCACTNGILEFLTEMGFRLEFEYIAKGYMFRKGRMKITVSKLIKIVPG 159
Query: 65 KPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
K D EPISQSY+VELS++AP GQ+ +GE+M+ FAEQLKPLVQLEKIDYKRL
Sbjct: 160 KQQDMANEPISQSYIVELSVVAPTGQENVGEEMRVFAEQLKPLVQLEKIDYKRL 213
>gi|194912677|ref|XP_001982554.1| GG12884 [Drosophila erecta]
gi|195347725|ref|XP_002040402.1| GM19171 [Drosophila sechellia]
gi|195469814|ref|XP_002099831.1| GE16712 [Drosophila yakuba]
gi|190648230|gb|EDV45523.1| GG12884 [Drosophila erecta]
gi|194121830|gb|EDW43873.1| GM19171 [Drosophila sechellia]
gi|194187355|gb|EDX00939.1| GE16712 [Drosophila yakuba]
Length = 217
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 96/114 (84%)
Query: 5 DKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQG 64
D+ RPT+VRS +D AC+ ++EFLTEMG R++FEYI++GYMFRKGRMKI VSK+ K+ G
Sbjct: 100 DQRRPTLVRSCMDCACTNGILEFLTEMGFRLEFEYIAKGYMFRKGRMKITVSKLIKIVPG 159
Query: 65 KPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
K D EPISQSY+VELS++AP GQ+ +GE+M+ FAEQLKPLVQLEKIDYKRL
Sbjct: 160 KQQDMANEPISQSYIVELSVVAPTGQENVGEEMRVFAEQLKPLVQLEKIDYKRL 213
>gi|195448310|ref|XP_002071601.1| GK10069 [Drosophila willistoni]
gi|194167686|gb|EDW82587.1| GK10069 [Drosophila willistoni]
Length = 219
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 96/114 (84%)
Query: 5 DKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQG 64
D+ RPT+VRS +D AC+ +++FLTEMG R++FEY+++GYMFRKGRMKI VSK+ K+ G
Sbjct: 102 DQRRPTLVRSCMDCACTNGILDFLTEMGFRLEFEYLAKGYMFRKGRMKITVSKLIKIVHG 161
Query: 65 KPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
K D EPISQSY+VELS++AP GQ+ +GE+M+ FAEQLKPLVQLEKIDYKRL
Sbjct: 162 KQQDMANEPISQSYIVELSVVAPTGQENVGEEMRVFAEQLKPLVQLEKIDYKRL 215
>gi|28571092|ref|NP_569948.3| mediator complex subunit 18, isoform A [Drosophila melanogaster]
gi|74949836|sp|Q9XZT1.1|MED18_DROME RecName: Full=Mediator of RNA polymerase II transcription subunit
18; AltName: Full=Mediator complex subunit 18; AltName:
Full=dp28b
gi|4725973|emb|CAB41707.1| EG:63B12.13 [Drosophila melanogaster]
gi|28381554|gb|AAF45675.3| mediator complex subunit 18, isoform A [Drosophila melanogaster]
gi|224494896|gb|ACN52010.1| SD20918p [Drosophila melanogaster]
Length = 217
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 95/114 (83%)
Query: 5 DKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQG 64
D RPT+VRS +D AC+ ++EFLTEMG R++FEYI++GYMFRKGRMKI VSK+ K+ G
Sbjct: 100 DLRRPTLVRSCMDCACTNGILEFLTEMGFRLEFEYIAKGYMFRKGRMKITVSKLIKIVPG 159
Query: 65 KPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
K D EPISQSY+VELS++AP GQ+ +GE+M+ FAEQLKPLVQLEKIDYKRL
Sbjct: 160 KQQDMANEPISQSYIVELSVVAPTGQENVGEEMRVFAEQLKPLVQLEKIDYKRL 213
>gi|195165140|ref|XP_002023397.1| GL20340 [Drosophila persimilis]
gi|194105502|gb|EDW27545.1| GL20340 [Drosophila persimilis]
Length = 217
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 96/114 (84%)
Query: 5 DKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQG 64
D+ RPT+VRS +D AC+ ++EFLTEMG R++FEYI++GYMFRKGRMKI VSK+ K+ G
Sbjct: 100 DQRRPTLVRSCMDCACTNGILEFLTEMGFRLEFEYIAKGYMFRKGRMKITVSKLIKIIPG 159
Query: 65 KPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
K D EPISQSY+VELS++AP GQ+ +GE+M+ FAEQLKPLVQL+KIDYKRL
Sbjct: 160 KQQDMANEPISQSYIVELSVVAPTGQENVGEEMRVFAEQLKPLVQLDKIDYKRL 213
>gi|125981473|ref|XP_001354740.1| GA13258 [Drosophila pseudoobscura pseudoobscura]
gi|54643051|gb|EAL31795.1| GA13258 [Drosophila pseudoobscura pseudoobscura]
Length = 217
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 96/114 (84%)
Query: 5 DKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQG 64
D+ RPT+VRS +D AC+ ++EFLTEMG R++FEYI++GYMFRKGRMKI VSK+ K+ G
Sbjct: 100 DQRRPTLVRSCMDCACTNGILEFLTEMGFRLEFEYIAKGYMFRKGRMKITVSKLIKIIPG 159
Query: 65 KPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
K D EPISQSY+VELS++AP GQ+ +GE+M+ FAEQLKPLVQL+KIDYKRL
Sbjct: 160 KQQDMANEPISQSYIVELSVVAPTGQENVGEEMRVFAEQLKPLVQLDKIDYKRL 213
>gi|220949294|gb|ACL87190.1| CG14802-PB [synthetic construct]
Length = 154
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 95/114 (83%)
Query: 5 DKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQG 64
D RPT+VRS +D AC+ ++EFLTEMG R++FEYI++GYMFRKGRMKI VSK+ K+ G
Sbjct: 37 DLRRPTLVRSCMDCACTNGILEFLTEMGFRLEFEYIAKGYMFRKGRMKITVSKLIKIVPG 96
Query: 65 KPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
K D EPISQSY+VELS++AP GQ+ +GE+M+ FAEQLKPLVQLEKIDYKRL
Sbjct: 97 KQQDMANEPISQSYIVELSVVAPTGQENVGEEMRVFAEQLKPLVQLEKIDYKRL 150
>gi|195047042|ref|XP_001992260.1| GH24653 [Drosophila grimshawi]
gi|193893101|gb|EDV91967.1| GH24653 [Drosophila grimshawi]
Length = 216
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 95/114 (83%)
Query: 5 DKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQG 64
D RPT+VRS +D AC+ +++FLTEMG R++FEYI++GYMFRKGRMKI VSK+ K+ G
Sbjct: 99 DMRRPTLVRSCMDCACTNGILDFLTEMGFRLEFEYIAKGYMFRKGRMKITVSKLIKIVPG 158
Query: 65 KPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
K D EPISQSY+VELS++AP GQ+ +GE+M+ FAEQLKPLVQLEKIDYKRL
Sbjct: 159 KQQDMANEPISQSYIVELSVVAPTGQENVGEEMRVFAEQLKPLVQLEKIDYKRL 212
>gi|321459604|gb|EFX70656.1| hypothetical protein DAPPUDRAFT_217150 [Daphnia pulex]
Length = 227
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/116 (62%), Positives = 98/116 (84%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK +PT++RS ID+AC+ VVEFL+E+GCR++FEY+ +GY+FRKGRMK+ +SKIF+M
Sbjct: 108 LGDKNQPTVLRSCIDIACTPNVVEFLSELGCRIEFEYVLKGYLFRKGRMKVTMSKIFRMG 167
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
Q K DS +E ++ SYLVELS+LAP GQD + +++K FAEQL+PLV LEKIDY+RL
Sbjct: 168 QAKSPDS-LESVTGSYLVELSLLAPSGQDAVADEIKVFAEQLRPLVHLEKIDYRRL 222
>gi|195397475|ref|XP_002057354.1| GJ16392 [Drosophila virilis]
gi|194147121|gb|EDW62840.1| GJ16392 [Drosophila virilis]
Length = 216
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 95/114 (83%)
Query: 5 DKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQG 64
D RPT+VRS +D AC+ +++FL+EMG R++FEYI++GYMFRKGRMKI VSK+ K+ G
Sbjct: 99 DMRRPTLVRSCMDCACTNGILDFLSEMGFRLEFEYIAKGYMFRKGRMKITVSKLIKIVPG 158
Query: 65 KPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
K D EPISQSY+VELS++AP GQ+ +GE+M+ FAEQLKPLVQLEKIDYKRL
Sbjct: 159 KQQDMANEPISQSYIVELSVVAPTGQENVGEEMRLFAEQLKPLVQLEKIDYKRL 212
>gi|195134216|ref|XP_002011533.1| GI11081 [Drosophila mojavensis]
gi|193906656|gb|EDW05523.1| GI11081 [Drosophila mojavensis]
Length = 217
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 95/114 (83%)
Query: 5 DKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQG 64
D RPT+VRS +D AC+ +++FL+EMG R++FEYI++GYMFRKGRMKI VSK+ K+ G
Sbjct: 100 DMRRPTLVRSCMDCACTNGILDFLSEMGFRLEFEYIAKGYMFRKGRMKITVSKLIKIVPG 159
Query: 65 KPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
K D EPISQSY+VELS++AP GQ+ +GE+M+ FAEQLKPLVQL+KIDYKRL
Sbjct: 160 KQQDMANEPISQSYIVELSVVAPTGQENVGEEMRVFAEQLKPLVQLDKIDYKRL 213
>gi|241172449|ref|XP_002410755.1| mediator of RNA polymerase II transcription subunit, putative
[Ixodes scapularis]
gi|215494971|gb|EEC04612.1| mediator of RNA polymerase II transcription subunit, putative
[Ixodes scapularis]
Length = 218
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 98/116 (84%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
VGD++R T+VRS IDV+ S +V FL E+G R+DFE++ +G+MF+KGRMK++V+K+F++
Sbjct: 101 VGDRSRHTVVRSCIDVSTSNNLVSFLNELGFRLDFEFVLKGHMFQKGRMKVIVAKVFRLL 160
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
Q DS EP+SQS+++ELS++APGGQ+ +G++MKAFA+QLKPLV+LEKID+ RL
Sbjct: 161 QQGNPDS-CEPVSQSHIIELSVIAPGGQESLGDEMKAFADQLKPLVELEKIDHTRL 215
>gi|443683669|gb|ELT87838.1| hypothetical protein CAPTEDRAFT_129251 [Capitella teleta]
Length = 202
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/117 (62%), Positives = 91/117 (77%), Gaps = 3/117 (2%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
V DK+R T+VRS IDV CS V +FL EMG R+D EY +GY+FRKGRMK+ VSKIF++
Sbjct: 85 VADKSRHTLVRSCIDVGCSSNVADFLFEMGFRLDHEYTVKGYLFRKGRMKVTVSKIFRVV 144
Query: 63 Q-GKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
Q G P + EP+++SYLVELS++AP GQD I +DMK FAE LKPLV LEKID++RL
Sbjct: 145 QSGNPEHA--EPLTKSYLVELSVVAPQGQDQIQDDMKGFAEHLKPLVMLEKIDHRRL 199
>gi|427798589|gb|JAA64746.1| Putative mediator of rna polymerase ii transcription subunit,
partial [Rhipicephalus pulchellus]
Length = 204
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 95/114 (83%), Gaps = 3/114 (2%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKM- 61
VGDK+R T+VRS IDV+ S VV FL EMG R+DFE++ +G+MF+KGRMK++V+K+F++
Sbjct: 92 VGDKSRHTVVRSCIDVSTSNNVVSFLNEMGFRLDFEFVLKGHMFQKGRMKVIVAKVFRLV 151
Query: 62 SQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDY 115
QG P +EP+S S+++ELS++AP GQ+ +G++MKAFAEQLKPLV+LEKID+
Sbjct: 152 QQGNP--ESIEPVSNSHIIELSVIAPAGQESLGDEMKAFAEQLKPLVELEKIDH 203
>gi|391348387|ref|XP_003748429.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Metaseiulus occidentalis]
Length = 262
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 96/120 (80%), Gaps = 3/120 (2%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
VGDK+R TI RS I+V S +V +L E+G R+D+E++++G++F+KGRMKILV KI ++
Sbjct: 145 VGDKSRFTICRSVIEVGTSSNLVTWLNELGFRLDYEFVAKGHIFQKGRMKILVQKIHRVC 204
Query: 63 Q-GKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRLPLS 121
Q G P +EP+SQS+L+ELS+LAP Q+ +GE+MKAFA+QL+PLV+LEK+D+ RL +S
Sbjct: 205 QSGNPET--LEPVSQSFLIELSVLAPPSQESLGEEMKAFADQLRPLVELEKVDHARLHVS 262
>gi|363744250|ref|XP_003643008.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Gallus gallus]
Length = 208
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 91/116 (78%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 IGDKNRHALVRNCVDIATSDNLTDFLVEMGFRMDHEFVAKGHVFRKGIMKIVVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS +EP+S SYLVEL+++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 MPGNTDS-IEPLSLSYLVELNVVAPAGQDIVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|308321608|gb|ADO27955.1| mediator of RNA polymerase II transcription subunit 18 [Ictalurus
furcatus]
Length = 208
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 93/117 (79%), Gaps = 3/117 (2%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFK-M 61
VGDK+R +VR+ +DVA S ++ +FL EMG RMD E++++G++FRKG +K++VSK+ + +
Sbjct: 93 VGDKSRHALVRNCVDVAASHSLPDFLNEMGFRMDHEFVAKGHIFRKGALKVVVSKLSRVL 152
Query: 62 SQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+ G ++ EP+S SYLVELS+LAP GQD + EDM++FAEQLKPLV LEKID KRL
Sbjct: 153 APGNTENA--EPLSLSYLVELSVLAPAGQDTVSEDMRSFAEQLKPLVHLEKIDPKRL 207
>gi|318064073|ref|NP_001188029.1| mediator of RNA polymerase II transcription subunit 18 [Ictalurus
punctatus]
gi|308324639|gb|ADO29454.1| mediator of RNA polymerase II transcription subunit 18 [Ictalurus
punctatus]
Length = 208
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 91/116 (78%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
VGDK+R +VR+ +DVA S ++ +FL EMG RMD E++++G++FRKG +K++VSK+ +
Sbjct: 93 VGDKSRHALVRNCVDVAASHSLPDFLNEMGFRMDHEFVAKGHIFRKGALKVVVSKLSRAL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+D+ EP+S SYLVELS+LAP GQD + EDM++FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDN-TEPLSLSYLVELSVLAPAGQDTVSEDMRSFAEQLKPLVHLEKIDPKRL 207
>gi|224091427|ref|XP_002188078.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Taeniopygia guttata]
Length = 208
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 91/116 (78%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 IGDKNRHALVRNCVDIATSDNLTDFLVEMGFRMDHEFVAKGHVFRKGIMKIMVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
++S +EP+S SYLVEL+++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 MPGNTES-IEPLSLSYLVELNVVAPAGQDIVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|41056143|ref|NP_956629.1| mediator of RNA polymerase II transcription subunit 18 [Danio
rerio]
gi|82188273|sp|Q7T3H7.1|MED18_DANRE RecName: Full=Mediator of RNA polymerase II transcription subunit
18; AltName: Full=Mediator complex subunit 18
gi|31419170|gb|AAH53113.1| Mediator of RNA polymerase II transcription, subunit 18 homolog
(yeast) [Danio rerio]
Length = 208
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 91/116 (78%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
VGDK+R +VR+ +DVA S ++ +FL EMG RMD E++++G +FRKG MK++VSK+ ++
Sbjct: 93 VGDKSRHALVRNCVDVAASHSLPDFLNEMGFRMDHEFVAKGQVFRKGVMKVVVSKLSRVL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+D+ EP+S SYLVELS+LAP GQD + EDM++FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDN-TEPLSLSYLVELSVLAPAGQDTVSEDMRSFAEQLKPLVHLEKIDPKRL 207
>gi|109000141|ref|XP_001113062.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform 1 [Macaca mulatta]
gi|297282708|ref|XP_002802314.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform 4 [Macaca mulatta]
gi|402853622|ref|XP_003891491.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 1 [Papio anubis]
gi|402853624|ref|XP_003891492.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 2 [Papio anubis]
gi|355557741|gb|EHH14521.1| hypothetical protein EGK_00462 [Macaca mulatta]
gi|355764241|gb|EHH62269.1| hypothetical protein EGM_20508 [Macaca fascicularis]
Length = 208
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQDV+ +DMK FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-TEALSLSYLVELSVVAPAGQDVVSDDMKNFAEQLKPLVHLEKIDPKRL 207
>gi|297282703|ref|XP_002802312.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform 2 [Macaca mulatta]
Length = 215
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 100 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 159
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQDV+ +DMK FAEQLKPLV LEKID KRL
Sbjct: 160 VPGNTDS-TEALSLSYLVELSVVAPAGQDVVSDDMKNFAEQLKPLVHLEKIDPKRL 214
>gi|296434241|ref|NP_001171790.1| mediator of RNA polymerase II transcription subunit 18
[Saccoglossus kowalevskii]
Length = 207
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 90/117 (76%), Gaps = 3/117 (2%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFK-M 61
VGDK R T+VRS ID A S + FL EMG R+D EY+ +GY+FRKGRMKI VSK+F+ +
Sbjct: 93 VGDKNRSTLVRSCIDCATSDNLSSFLVEMGFRLDHEYVIKGYLFRKGRMKITVSKLFRVI 152
Query: 62 SQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
S G + +E +S S+LVELS++AP GQD +G+DM++FAE LKP+VQ+EK+D KRL
Sbjct: 153 SPGVTEE--IEAVSLSHLVELSVVAPAGQDAVGDDMRSFAEHLKPIVQMEKMDPKRL 207
>gi|344287486|ref|XP_003415484.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Loxodonta africana]
Length = 208
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VRS +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRSCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS +E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-IEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|395863096|ref|XP_003803745.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Otolemur garnettii]
gi|403308357|ref|XP_003944630.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
[Saimiri boliviensis boliviensis]
Length = 208
Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQDV+ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-TEALSLSYLVELSVVAPAGQDVVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|297282705|ref|XP_002802313.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform 3 [Macaca mulatta]
Length = 251
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 136 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 195
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQDV+ +DMK FAEQLKPLV LEKID KRL
Sbjct: 196 VPGNTDS-TEALSLSYLVELSVVAPAGQDVVSDDMKNFAEQLKPLVHLEKIDPKRL 250
>gi|126328775|ref|XP_001364993.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Monodelphis domestica]
Length = 208
Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R T+VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHTLVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIVVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 IPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|351695930|gb|EHA98848.1| Mediator of RNA polymerase II transcription subunit 18
[Heterocephalus glaber]
Length = 208
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS +E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-IEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|188035867|ref|NP_001120822.1| mediator of RNA polymerase II transcription subunit 18 [Homo
sapiens]
gi|188219520|ref|NP_060108.2| mediator of RNA polymerase II transcription subunit 18 [Homo
sapiens]
gi|114555087|ref|XP_001152339.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 1 [Pan troglodytes]
gi|297665780|ref|XP_002811218.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 2 [Pongo abelii]
gi|297665782|ref|XP_002811219.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 3 [Pongo abelii]
gi|397515816|ref|XP_003828139.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 1 [Pan paniscus]
gi|397515818|ref|XP_003828140.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 2 [Pan paniscus]
gi|410032566|ref|XP_003949386.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
[Pan troglodytes]
gi|410032568|ref|XP_003949387.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
[Pan troglodytes]
gi|426328611|ref|XP_004025345.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 1 [Gorilla gorilla gorilla]
gi|426328613|ref|XP_004025346.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 2 [Gorilla gorilla gorilla]
gi|426328615|ref|XP_004025347.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 3 [Gorilla gorilla gorilla]
gi|74752353|sp|Q9BUE0.1|MED18_HUMAN RecName: Full=Mediator of RNA polymerase II transcription subunit
18; AltName: Full=Mediator complex subunit 18; AltName:
Full=p28b
gi|12803717|gb|AAH02694.1| MED18 protein [Homo sapiens]
gi|40714343|dbj|BAD06869.1| p28b [Homo sapiens]
gi|119628104|gb|EAX07699.1| mediator of RNA polymerase II transcription, subunit 18 homolog
(yeast), isoform CRA_a [Homo sapiens]
gi|119628105|gb|EAX07700.1| mediator of RNA polymerase II transcription, subunit 18 homolog
(yeast), isoform CRA_a [Homo sapiens]
gi|119628107|gb|EAX07702.1| mediator of RNA polymerase II transcription, subunit 18 homolog
(yeast), isoform CRA_a [Homo sapiens]
gi|208968575|dbj|BAG74126.1| mediator complex subunit 18 [synthetic construct]
gi|410206736|gb|JAA00587.1| mediator complex subunit 18 [Pan troglodytes]
gi|410251062|gb|JAA13498.1| mediator complex subunit 18 [Pan troglodytes]
gi|410291870|gb|JAA24535.1| mediator complex subunit 18 [Pan troglodytes]
gi|410291872|gb|JAA24536.1| mediator complex subunit 18 [Pan troglodytes]
gi|410330157|gb|JAA34025.1| mediator complex subunit 18 [Pan troglodytes]
Length = 208
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DMK FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMKNFAEQLKPLVHLEKIDPKRL 207
>gi|397138640|ref|XP_003846798.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Homo sapiens]
Length = 199
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 84 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 143
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DMK FAEQLKPLV LEKID KRL
Sbjct: 144 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMKNFAEQLKPLVHLEKIDPKRL 198
>gi|332245203|ref|XP_003271752.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 1 [Nomascus leucogenys]
gi|332245205|ref|XP_003271753.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 2 [Nomascus leucogenys]
gi|332245207|ref|XP_003271754.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 3 [Nomascus leucogenys]
Length = 208
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRVL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DMK FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMKNFAEQLKPLVHLEKIDPKRL 207
>gi|119628106|gb|EAX07701.1| mediator of RNA polymerase II transcription, subunit 18 homolog
(yeast), isoform CRA_b [Homo sapiens]
Length = 163
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 48 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 107
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DMK FAEQLKPLV LEKID KRL
Sbjct: 108 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMKNFAEQLKPLVHLEKIDPKRL 162
>gi|194382240|dbj|BAG58875.1| unnamed protein product [Homo sapiens]
Length = 215
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 100 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 159
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DMK FAEQLKPLV LEKID KRL
Sbjct: 160 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMKNFAEQLKPLVHLEKIDPKRL 214
>gi|395521928|ref|XP_003765066.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
[Sarcophilus harrisii]
Length = 208
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 MPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|348571062|ref|XP_003471315.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Cavia porcellus]
Length = 208
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVTKGHLFRKGIMKIMVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|296207243|ref|XP_002750559.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 1 [Callithrix jacchus]
gi|296207245|ref|XP_002750560.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 2 [Callithrix jacchus]
Length = 208
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|115495983|ref|NP_001069703.1| mediator of RNA polymerase II transcription subunit 18 [Bos taurus]
gi|426221848|ref|XP_004005118.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
[Ovis aries]
gi|122133501|sp|Q0VCD4.1|MED18_BOVIN RecName: Full=Mediator of RNA polymerase II transcription subunit
18; AltName: Full=Mediator complex subunit 18
gi|111307124|gb|AAI20224.1| Mediator complex subunit 18 [Bos taurus]
gi|296490023|tpg|DAA32136.1| TPA: mediator of RNA polymerase II transcription subunit 18 [Bos
taurus]
gi|440905997|gb|ELR56313.1| Mediator of RNA polymerase II transcription subunit 18 [Bos
grunniens mutus]
Length = 208
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E+++RG++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVARGHLFRKGIMKIVVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+D+ E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDN-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|209730950|gb|ACI66344.1| Mediator of RNA polymerase II transcription subunit 18 [Salmo
salar]
Length = 208
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
VGDK+R +VR+ +DVA S ++ +FL EMG RMD E++++G++FRKG +K++VSK+ ++
Sbjct: 93 VGDKSRHVLVRNCVDVAASHSLPDFLNEMGFRMDHEFVAKGHIFRKGVLKVVVSKLSRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKR 117
+++ EP+S SYLVELS+LAP GQD + EDM++FAEQLKPLV LEKID KR
Sbjct: 153 VPGNTEN-TEPLSLSYLVELSVLAPAGQDTMSEDMRSFAEQLKPLVHLEKIDPKR 206
>gi|355701764|gb|AES01785.1| mediator complex subunit 18 [Mustela putorius furo]
Length = 209
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 95 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 154
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 155 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 209
>gi|57044032|ref|XP_544460.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 1 [Canis lupus familiaris]
gi|301755116|ref|XP_002913377.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Ailuropoda melanoleuca]
gi|410966593|ref|XP_003989815.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 1 [Felis catus]
gi|410966595|ref|XP_003989816.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
isoform 2 [Felis catus]
gi|281351634|gb|EFB27218.1| hypothetical protein PANDA_001193 [Ailuropoda melanoleuca]
Length = 208
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|169234862|ref|NP_001108509.1| uncharacterized protein LOC682988 [Rattus norvegicus]
gi|354472402|ref|XP_003498428.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Cricetulus griseus]
gi|149024140|gb|EDL80637.1| rCG31388 [Rattus norvegicus]
gi|165971258|gb|AAI58673.1| LOC682988 protein [Rattus norvegicus]
gi|344245057|gb|EGW01161.1| Mediator of RNA polymerase II transcription subunit 18 [Cricetulus
griseus]
Length = 208
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIVVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|444519070|gb|ELV12554.1| Mediator of RNA polymerase II transcription subunit 18 [Tupaia
chinensis]
Length = 208
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GD+ R +VRS +D+A S + +FL EMG RMD E++++G++FRKG MK++V K+F++
Sbjct: 93 MGDRNRHALVRSCVDIATSENLTDFLVEMGFRMDHEFVAKGHLFRKGIMKVVVYKVFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ EDM+ FAEQLKPLV LEKID KR
Sbjct: 153 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSEDMRNFAEQLKPLVHLEKIDAKRF 207
>gi|335290810|ref|XP_003356289.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform 2 [Sus scrofa]
Length = 215
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 100 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIVVYKIFRIL 159
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 160 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 214
>gi|335290808|ref|XP_003356288.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform 1 [Sus scrofa]
Length = 208
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIVVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|291399463|ref|XP_002716126.1| PREDICTED: mediator complex subunit 18 [Oryctolagus cuniculus]
Length = 208
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KI+++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIYRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS +E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-IEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|149593928|ref|XP_001509575.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Ornithorhynchus anatinus]
Length = 208
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+S+D+A S + +FL EMG R+D E++++G++FRKG MK+ V K+F++
Sbjct: 93 MGDKNRQALVRNSVDIATSENLTDFLMEMGFRLDHEFVAKGHLFRKGAMKVCVYKVFRVL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS +E +S SYLVELS++AP GQD + EDM+ FAEQLKPLV LEKID KRL
Sbjct: 153 LPGNTDS-IEALSLSYLVELSVVAPAGQDGVSEDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|348526081|ref|XP_003450549.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Oreochromis niloticus]
Length = 209
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
VGDK+R +VR+ +DVA S ++ EFL EMG RMD E++S G++FRKG MKI+VSK+ ++
Sbjct: 93 VGDKSRHALVRNCVDVAASHSLPEFLNEMGFRMDHEFVSNGHIFRKGAMKIVVSKLSRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKID 114
+++ E +S SYLVELS+LAP GQD + EDM++FAEQLKPLV LEKID
Sbjct: 153 VPGNTEN-TEHLSLSYLVELSVLAPAGQDTVSEDMRSFAEQLKPLVHLEKID 203
>gi|410932497|ref|XP_003979630.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like, partial [Takifugu rubripes]
Length = 204
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
VGDK+R T+VR+ +DVA S ++ +FL EMG RMD E+++ GY+FRKG MK+LVS++ ++
Sbjct: 93 VGDKSRHTLVRNCVDVAASHSLPDFLNEMGFRMDHEFVAGGYIFRKGAMKVLVSRVSRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKID 114
+++ E +S SYLVELS+LAP GQD + EDM++FAEQLKPLV LEKID
Sbjct: 153 VPGNTEN-TERVSSSYLVELSVLAPAGQDTVSEDMRSFAEQLKPLVHLEKID 203
>gi|7019886|dbj|BAA90910.1| unnamed protein product [Homo sapiens]
Length = 208
Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V K F++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKTFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DMK FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMKNFAEQLKPLVHLEKIDPKRL 207
>gi|21313064|ref|NP_080315.1| mediator of RNA polymerase II transcription subunit 18 [Mus
musculus]
gi|81904509|sp|Q9CZ82.1|MED18_MOUSE RecName: Full=Mediator of RNA polymerase II transcription subunit
18; AltName: Full=Mediator complex subunit 18
gi|12849926|dbj|BAB28536.1| unnamed protein product [Mus musculus]
gi|46250291|gb|AAH68306.1| Mediator of RNA polymerase II transcription, subunit 18 homolog
(yeast) [Mus musculus]
gi|74198252|dbj|BAE35296.1| unnamed protein product [Mus musculus]
gi|148698156|gb|EDL30103.1| mediator of RNA polymerase II transcription, subunit 18 homolog
(yeast) [Mus musculus]
Length = 208
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MK++V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKVVVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|431891179|gb|ELK02056.1| Mediator of RNA polymerase II transcription subunit 18 [Pteropus
alecto]
Length = 208
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+DS E +S S+LVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTDS-TEALSLSFLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|62858681|ref|NP_001017086.1| mediator of RNA polymerase II transcription subunit 18 [Xenopus
(Silurana) tropicalis]
gi|123893054|sp|Q28GE1.1|MED18_XENTR RecName: Full=Mediator of RNA polymerase II transcription subunit
18; AltName: Full=Mediator complex subunit 18
gi|89266920|emb|CAJ82247.1| mediator of RNA polymerase II transcription, subunit 18 homolog
(yeast) [Xenopus (Silurana) tropicalis]
gi|166796936|gb|AAI58935.1| mediator of RNA polymerase II transcription, subunit 18 homolog
(yeast) [Xenopus (Silurana) tropicalis]
Length = 208
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
Query: 4 GDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQ 63
GD++R T+VR+ +D+A S + EFL EMG RMD E+++RG++FRKG MK+ V K+F++
Sbjct: 94 GDRSRHTLVRNCVDIATSDVLPEFLQEMGFRMDHEFVARGHLFRKGVMKVAVYKVFRVLV 153
Query: 64 GKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
++ G EP+S SYLVELS +AP GQD I ++++ FAEQL+PLVQLEKID KRL
Sbjct: 154 AGAAE-GAEPLSLSYLVELSAVAPAGQDNIADEVRGFAEQLRPLVQLEKIDPKRL 207
>gi|260808789|ref|XP_002599189.1| hypothetical protein BRAFLDRAFT_199934 [Branchiostoma floridae]
gi|229284466|gb|EEN55201.1| hypothetical protein BRAFLDRAFT_199934 [Branchiostoma floridae]
Length = 204
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 92/117 (78%), Gaps = 1/117 (0%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKM 61
G+GDK+R T+VR+ IDVA S V FLT+MG R+D E + +GY+F KG +K+ VSKIF++
Sbjct: 86 GIGDKSRSTLVRTCIDVATSDNVTTFLTDMGFRLDHECVVKGYLFTKGCIKVTVSKIFRV 145
Query: 62 SQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+ +++ +EP+S S+LVELS+++P GQD + + MK FAEQLKP+VQLEK+D++RL
Sbjct: 146 TVPGNTEN-LEPLSLSHLVELSVVSPSGQDEVADTMKLFAEQLKPIVQLEKVDHRRL 201
>gi|149694166|ref|XP_001504038.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Equus caballus]
gi|335775759|gb|AEH58679.1| mediator of RNA polymerase II transcriptio subunit 18-like protein
[Equus caballus]
Length = 208
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
+GDK R +VR+ +D+A S + +FL EMG RMD E++++G++FRKG MKI+V KIF++
Sbjct: 93 MGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
++S E +S SYLVELS++AP GQD++ +DM+ FAEQLKPLV LEKID KRL
Sbjct: 153 VPGNTES-TEALSLSYLVELSVVAPAGQDMVSDDMRNFAEQLKPLVHLEKIDPKRL 207
>gi|209738128|gb|ACI69933.1| Mediator of RNA polymerase II transcription subunit 18 [Salmo
salar]
Length = 208
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
VGDK+R +VR+ +DVA S ++ +FL EMG RMD E++++G++FR+G +K++VSK+ ++
Sbjct: 93 VGDKSRHALVRNCVDVAASHSLPDFLNEMGFRMDHEFVAKGHIFRRGVLKVVVSKLSRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKR 117
+++ EP+S SYLVELS+LAP GQD + E+M++FAEQLKPLV LEKID KR
Sbjct: 153 VPGNTEN-TEPLSLSYLVELSVLAPAGQDTMSEEMRSFAEQLKPLVHLEKIDPKR 206
>gi|148226402|ref|NP_001086933.1| mediator of RNA polymerase II transcription subunit 18 [Xenopus
laevis]
gi|82182365|sp|Q6DD39.1|MED18_XENLA RecName: Full=Mediator of RNA polymerase II transcription subunit
18; AltName: Full=Mediator complex subunit 18
gi|50418245|gb|AAH77790.1| MGC80383 protein [Xenopus laevis]
Length = 208
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
Query: 4 GDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQ 63
GD++R T+VR+ +D+A S + EFL EMG RMD E+++RG++FRKG MK+ V K+F++
Sbjct: 94 GDRSRHTLVRNCVDIATSDVLPEFLQEMGFRMDHEFVARGHLFRKGVMKVAVYKVFRVLV 153
Query: 64 GKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
++ G EP+S SYLVELS +AP GQD I ++++ FAEQL+PLVQLEKID KR+
Sbjct: 154 SGAAE-GAEPLSLSYLVELSAVAPAGQDNIADEVRGFAEQLRPLVQLEKIDPKRV 207
>gi|432910337|ref|XP_004078317.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Oryzias latipes]
Length = 209
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
VGDK+R +VR+ +DVA S ++ EFL EMG RMD E+++ G++FRKG MK++VSK+ ++
Sbjct: 93 VGDKSRHALVRNCVDVAASQSLPEFLNEMGFRMDHEFVASGHIFRKGAMKVVVSKVSRIL 152
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKID 114
+++ E +S SYLVELSILAP GQD + EDM++FAEQLKPL+ LEKID
Sbjct: 153 VPGNTEN-TERMSLSYLVELSILAPAGQDTVSEDMRSFAEQLKPLIHLEKID 203
>gi|346472473|gb|AEO36081.1| hypothetical protein [Amblyomma maculatum]
Length = 258
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 90/123 (73%), Gaps = 11/123 (8%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKM- 61
VGDK+R T+VRS IDV+ S V FL E+G R+DFE++ +G+MF+KGRMKI+V+K+F++
Sbjct: 92 VGDKSRHTVVRSCIDVSTSNNVASFLNELGFRLDFEFVLKGHMFQKGRMKIIVAKVFRLV 151
Query: 62 SQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRLPLS 121
QG P +EPIS S+++ELS++AP GQ+ +G++MKAFA+QLKP Y L LS
Sbjct: 152 QQGNP--ESIEPISNSHIIELSVIAPAGQESLGDEMKAFADQLKP--------YPFLGLS 201
Query: 122 MAP 124
P
Sbjct: 202 FVP 204
>gi|405971868|gb|EKC36674.1| Mediator of RNA polymerase II transcription subunit 18 [Crassostrea
gigas]
Length = 582
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 57/105 (54%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
VGDK RPT+VRS ID S V +F+ E+G RMD E++ +G+ F KGRMKI VSK +KM+
Sbjct: 474 VGDKNRPTLVRSYIDCPTSENVAQFIGELGFRMDHEFVVKGFYFHKGRMKITVSKFYKMN 533
Query: 63 Q-GKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKP 106
Q G ++ +E + SYLVELS++ GQ+ +G+DMK FAEQLKP
Sbjct: 534 QPGNTTNDTIETVCPSYLVELSVVTSSGQEAVGDDMKNFAEQLKP 578
>gi|390356618|ref|XP_781912.2| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Strongylocentrotus purpuratus]
Length = 210
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 81/111 (72%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
V DK+R VRS D A S + FL E+G ++D+E+++ G+MFRKGR+KI VSK++K S
Sbjct: 98 VSDKSRMVTVRSYHDCATSKNLPNFLDEIGFKLDYEFVAEGHMFRKGRLKITVSKLYKFS 157
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKI 113
Q +S ++ ++QS LVELS++AP G + + EDM+ FAEQLKPLV ++K+
Sbjct: 158 QPGLPESPLDVMTQSQLVELSVVAPSGSENVPEDMRLFAEQLKPLVIVDKL 208
>gi|313241023|emb|CBY33325.1| unnamed protein product [Oikopleura dioica]
Length = 228
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 78/109 (71%), Gaps = 1/109 (0%)
Query: 11 IVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQ-GKPSDS 69
++R+ + V CS V FLTE+G R D E++S+GY++RKGR+KI++SK+ KM + G+P +
Sbjct: 112 LMRNHVTVGCSENVTSFLTELGFRADTEFLSKGYLYRKGRVKIVLSKLCKMKEPGRPEEQ 171
Query: 70 GVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+ P+++S+ VE+S+ G + G ++K FAE LKP V+L K D++++
Sbjct: 172 NLIPLTKSHFVEVSVTVLTGTEDPGIELKHFAEMLKPQVKLMKTDHRQI 220
>gi|313226045|emb|CBY21188.1| unnamed protein product [Oikopleura dioica]
Length = 228
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 78/109 (71%), Gaps = 1/109 (0%)
Query: 11 IVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQ-GKPSDS 69
++R+ + V CS V FLTE+G R D E++S+GY++RKGR+KI++SK+ KM + G+P +
Sbjct: 112 LMRNHVTVGCSENVTSFLTELGFRADTEFLSKGYLYRKGRVKIVLSKLCKMKEPGRPEEQ 171
Query: 70 GVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+ P+++S+ VE+S+ G + G ++K FAE LKP V+L K D++++
Sbjct: 172 NLIPLTKSHFVEVSVTVLTGTEDPGIELKHFAEMLKPQVKLMKTDHRQI 220
>gi|313226580|emb|CBY21726.1| unnamed protein product [Oikopleura dioica]
gi|313239971|emb|CBY32333.1| unnamed protein product [Oikopleura dioica]
Length = 228
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 77/109 (70%), Gaps = 1/109 (0%)
Query: 11 IVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQ-GKPSDS 69
++R+ + V CS V FLTE+G R D E++S+GY++RKGR+KI++SK+ KM + G+ +
Sbjct: 113 LMRNQVTVGCSENVTSFLTELGFRADTEFLSKGYLYRKGRIKIVLSKLCKMKEPGQHQEQ 172
Query: 70 GVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
+ P+++S++VE+S+ G + G +++ FAE LKP ++L K D++ +
Sbjct: 173 NLLPLTKSHMVEISVTTIAGTEDPGPELRHFAEMLKPQIKLTKTDHREI 221
>gi|449670759|ref|XP_004207342.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Hydra magnipapillata]
Length = 200
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query: 8 RPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPS 67
R +RS I+V S + +L ++G + D+E + RGY F KG M+I VS++ K+ + + +
Sbjct: 92 RAATMRSIIEVETSDNISTYLEQLGFQFDYETLLRGYSFYKGPMRINVSRLHKIPE-RGN 150
Query: 68 DSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDYKR 117
S + P++ SYLVEL++ QD + E+MKAFAE LKP+V L+KI+ KR
Sbjct: 151 LSNIMPMTDSYLVELTLHTLVQQDSLCEEMKAFAEHLKPIVVLDKIEQKR 200
>gi|46811818|gb|AAT02163.1| hypothetical protein L3ni56 isoform a [Dictyocaulus viviparus]
Length = 217
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 76/117 (64%), Gaps = 4/117 (3%)
Query: 5 DKARPTIVRSSID-VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQ 63
D+ P IVR ID +A S +++F+ +G RMD+EYI++G ++ G+MKI++S+I K +
Sbjct: 100 DQKCPVIVRKVIDSIAYSHLMMDFVKTLGLRMDYEYIAKGTVWINGKMKIVISQIQKTEK 159
Query: 64 -GKPSDSGVEPISQSYLVELSILAPGGQDVI--GEDMKAFAEQLKPLVQLEKIDYKR 117
G S ++ S SYLVE+S+ P + + ++ FA+QL PLV++EK+DY R
Sbjct: 160 AGHYDQSNLKRFSDSYLVEISVCIPESAEYTSAAKQLRDFADQLLPLVEIEKVDYWR 216
>gi|393909048|gb|EFO22495.2| mediator protein 18 [Loa loa]
Length = 227
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 75/113 (66%), Gaps = 4/113 (3%)
Query: 9 PTIVRSSID-VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPS 67
PTI+R SID + S ++EF+ +G RMD+EY+++GY+F KG +KI+++ I + +
Sbjct: 112 PTIIRKSIDSLIYSSNMMEFVKTLGLRMDYEYLTKGYLFTKGHIKIIINNITRTEKIGTY 171
Query: 68 DSGV-EPISQSYLVELSILAPGGQDVI--GEDMKAFAEQLKPLVQLEKIDYKR 117
D V +P+S S L+E+S P ++ + + +++FA+QL P+ ++K++Y R
Sbjct: 172 DPNVLKPLSDSLLIEMSTALPDTKEYMTTAKALRSFADQLSPICDMQKVEYWR 224
>gi|324528517|gb|ADY48920.1| Mediator of RNA polymerase II transcription subunit 18, partial
[Ascaris suum]
Length = 226
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Query: 4 GDKARPTIVRSSID-VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS 62
D + PTI+R SID + S ++EF+ +G RMD+EYI++GY+F KG +KI++ I +
Sbjct: 107 ADISCPTIIRKSIDSLIYSHDMMEFVKTLGLRMDYEYITKGYLFTKGNIKIVIDNITRTE 166
Query: 63 QGKPSDSG-VEPISQSYLVELSILAPGGQDVI--GEDMKAFAEQLKPLVQLEKIDYKR 117
+ D ++ +S S L+E+S+ P ++ I + ++ FA+QL P+ ++K++Y R
Sbjct: 167 KTGTYDPNLLKQLSDSLLIEMSVAQPDSKEYITSAKMLRDFADQLLPICDMQKVEYWR 224
>gi|17506247|ref|NP_491869.1| Protein MDT-18 [Caenorhabditis elegans]
gi|75020962|sp|Q966M5.1|MED18_CAEEL RecName: Full=Mediator of RNA polymerase II transcription subunit
18; AltName: Full=Mediator complex subunit 18
gi|351060427|emb|CCD68096.1| Protein MDT-18 [Caenorhabditis elegans]
Length = 232
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 5 DKARPTIVRSSID-VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQ 63
D+ PTIVR I + S ++ + +G RMD+EY+++G ++ KG +KIL S + S+
Sbjct: 105 DQKCPTIVRKEISSLVHSQDMMTYAKSLGLRMDYEYMTQGKLWTKGNIKILHSILTSTSR 164
Query: 64 GKPSDSG-VEPISQSYLVELSILAPGGQDVI--GEDMKAFAEQLKPLVQLEKIDY--KRL 118
DS ++ +S S LVE+SI P + + + ++ FA+QL PLV +EK+DY K
Sbjct: 165 AGTYDSNSIKSVSDSALVEISISLPESAEYMPAAKSLRDFADQLMPLVNMEKVDYWKKMF 224
Query: 119 PLSMAP 124
P AP
Sbjct: 225 PAQAAP 230
>gi|312078056|ref|XP_003141572.1| mediator protein 18 [Loa loa]
Length = 213
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 9 PTIVRSSID-VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPS 67
PTI+R SID + S ++EF+ +G RMD+EY+++GY+F KG +KI+++ I + +
Sbjct: 112 PTIIRKSIDSLIYSSNMMEFVKTLGLRMDYEYLTKGYLFTKGHIKIIINNITRTEKIGTY 171
Query: 68 DSGV-EPISQSYLVELSILAPGGQDVI--GEDMKAFAEQLKP 106
D V +P+S S L+E+S P ++ + + +++FA+QL P
Sbjct: 172 DPNVLKPLSDSLLIEMSTALPDTKEYMTTAKALRSFADQLSP 213
>gi|402586547|gb|EJW80485.1| hypothetical protein WUBG_08607 [Wuchereria bancrofti]
Length = 213
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 9 PTIVRSSID-VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPS 67
PTI+R SID + S ++EF+ +G RMD+EY+++GY+F KG +KI+++ I + +
Sbjct: 112 PTIIRKSIDSLIYSSNMMEFVKTLGLRMDYEYLTKGYLFTKGHIKIIINNITRTEKIGTY 171
Query: 68 DSGV-EPISQSYLVELSILAPGGQDVI--GEDMKAFAEQLKP 106
D V +P+S S L+E+S P ++ + + +++FA+QL P
Sbjct: 172 DPNVLKPLSDSLLIEMSAALPDTKEYMTTAKALRSFADQLSP 213
>gi|308474955|ref|XP_003099697.1| hypothetical protein CRE_23566 [Caenorhabditis remanei]
gi|308266352|gb|EFP10305.1| hypothetical protein CRE_23566 [Caenorhabditis remanei]
Length = 234
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 71/117 (60%), Gaps = 4/117 (3%)
Query: 5 DKARPTIVRSSID-VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFK-MS 62
D+ PTIVR I + S ++ + +G RMD+EYI++G ++ KG +KIL + + K +
Sbjct: 105 DQKCPTIVRKEISSLVHSNDMMTYAKSLGLRMDYEYITQGKLWTKGNIKILHATLTKTLK 164
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVI--GEDMKAFAEQLKPLVQLEKIDYKR 117
G + ++ +S S LVE+SI P + + + ++ FA+QL PLV +EK+DY +
Sbjct: 165 AGTYDSTSIKSMSDSALVEISISLPESAEYMTAAKTLRDFADQLMPLVHMEKVDYWK 221
>gi|170595618|ref|XP_001902453.1| Mediator protein 18 [Brugia malayi]
gi|170595620|ref|XP_001902454.1| Mediator protein 18 [Brugia malayi]
gi|158589867|gb|EDP28698.1| Mediator protein 18, putative [Brugia malayi]
gi|158589868|gb|EDP28699.1| Mediator protein 18, putative [Brugia malayi]
Length = 213
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 9 PTIVRSSID-VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPS 67
PTI+R SID + S ++EF+ +G RMD+EY+++GY+F KG +KI+++ I + +
Sbjct: 112 PTIIRKSIDSLIYSSNMMEFVKTLGLRMDYEYLTKGYLFTKGYIKIIINNITRTEKIGTY 171
Query: 68 DSGV-EPISQSYLVELSILAPGGQDVI--GEDMKAFAEQLKP 106
D V +P+S S L+E+S P ++ + + +++FA+QL P
Sbjct: 172 DPNVLKPLSDSLLIEMSAALPDTKEYMTTAKALRSFADQLSP 213
>gi|268568042|ref|XP_002640143.1| C. briggsae CBR-MDT-18 protein [Caenorhabditis briggsae]
gi|74790580|sp|Q61D43.1|MED18_CAEBR RecName: Full=Mediator of RNA polymerase II transcription subunit
18; AltName: Full=Mediator complex subunit 18
Length = 227
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Query: 5 DKARPTIVRSSID-VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFK-MS 62
D+ PTIVR I + S ++ + +G RMD+EYI++G ++ KG +KIL S + + +
Sbjct: 99 DQKCPTIVRKEISSLVHSQDMMTYAKSLGLRMDYEYITQGKLWTKGNIKILHSTLTRTLR 158
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVI--GEDMKAFAEQLKPLVQLEKIDY 115
G S ++ +S S LVE+SI P + + + ++ FA+QL PLV +EKIDY
Sbjct: 159 AGTYDSSSLKSMSDSALVEISISLPESAEYMPAAKSLRDFADQLMPLVNMEKIDY 213
>gi|308475087|ref|XP_003099763.1| CRE-MDT-18 protein [Caenorhabditis remanei]
gi|308266418|gb|EFP10371.1| CRE-MDT-18 protein [Caenorhabditis remanei]
Length = 234
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 71/117 (60%), Gaps = 4/117 (3%)
Query: 5 DKARPTIVRSSID-VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFK-MS 62
D+ PTIVR I + S ++ + +G RMD+EYI++G ++ KG +KIL + + K +
Sbjct: 105 DQKCPTIVRKEISSLVHSNDMMTYAKSLGLRMDYEYITQGKLWTKGNIKILHATLTKTLK 164
Query: 63 QGKPSDSGVEPISQSYLVELSILAPGGQDVI--GEDMKAFAEQLKPLVQLEKIDYKR 117
G S ++ +S S LVE+SI P + + + ++ FA+QL PLV +EK+DY +
Sbjct: 165 AGTYDSSSIKSMSDSALVEISISLPESAEYMPAAKSLRDFADQLMPLVHMEKVDYWK 221
>gi|156385142|ref|XP_001633490.1| predicted protein [Nematostella vectensis]
gi|156220561|gb|EDO41427.1| predicted protein [Nematostella vectensis]
Length = 162
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 44/59 (74%)
Query: 3 VGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKM 61
+GDK+R T++RS ++V+ S + FL E+G R D+E + +G++F KG M+I VS++F++
Sbjct: 88 MGDKSRATLLRSCVEVSTSENLTAFLEELGFRFDYEVVLKGFVFYKGHMRITVSQVFRV 146
>gi|440790106|gb|ELR11394.1| Med18 protein [Acanthamoeba castellanii str. Neff]
Length = 351
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 12 VRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR-MKILVSKIFKMSQGKPSDSG 70
VR+ DV S +++FL MG + FE+I G++F+ R + + V+++ K+ K S
Sbjct: 172 VRNVTDVEVSDNIIDFLRLMGYQFQFEFIREGFVFQTQRKITVSVTQVKKIVD-KEDLST 230
Query: 71 VEP-ISQSYLVELSILAPGGQDV--IGEDMKAFAEQLKPLVQLEKIDYKRL 118
EP ++ ++ VELS + + +++ +FA+ L PLV ++++DY+R
Sbjct: 231 AEPLVAGTWFVELSARTDDSNLIPSVADEINSFADYLMPLVDVKRVDYRRF 281
>gi|46811822|gb|AAT02165.1| hypothetical protein L3ni56 isoform c [Dictyocaulus viviparus]
Length = 171
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 5 DKARPTIVRSSID-VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQ 63
D+ P IVR ID +A S +++F+ +G RMD+EYI++G ++ G+MKI++S+I K +
Sbjct: 100 DQKCPVIVRKVIDSIAYSHLMMDFVKTLGLRMDYEYIAKGTVWINGKMKIVISQIQKTEK 159
>gi|358334558|dbj|GAA53026.1| mediator of RNA polymerase II transcription subunit 18 [Clonorchis
sinensis]
Length = 302
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 1 MGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFK 60
+G + R RS ++V + +V FL E+G +F Y++ G +F +GR+K+ V + +
Sbjct: 165 LGAVETDRTVSRRSCLEVPVTGPLVCFLQELGFEPEFTYVAEGLIFIRGRVKVCVYTVNE 224
Query: 61 MSQGK---PSDSGVEPIS--------------QSYLVELSILAPGGQDVIGEDMKAFAEQ 103
+ Q + PS GV+ IS S+LVE+S + + + +++ FA+
Sbjct: 225 VVQFESPVPSMPGVDGISGQDSYPKEWRRVCPNSWLVEISAVGSPADESLQDEVAEFADL 284
Query: 104 LKPLVQLEKID 114
L P++ K+D
Sbjct: 285 LFPVIVPGKLD 295
>gi|46811820|gb|AAT02164.1| hypothetical protein L3ni56 isoform b [Dictyocaulus viviparus]
Length = 195
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 5 DKARPTIVRSSID-VACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQ 63
D+ P IVR ID +A S +++F+ +G RMD+EYI++G ++ G+MKI++S+I K +
Sbjct: 100 DQKCPVIVRKVIDSIAYSHLMMDFVKTLGLRMDYEYIAKGTVWINGKMKIVISQIQKTEK 159
>gi|302821083|ref|XP_002992206.1| hypothetical protein SELMODRAFT_162215 [Selaginella moellendorffii]
gi|300139973|gb|EFJ06703.1| hypothetical protein SELMODRAFT_162215 [Selaginella moellendorffii]
Length = 232
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR---MKILVSKI 58
G G + P +VR+ ++ S + F +G +MD+E + G+ +R R + + V+ +
Sbjct: 89 GTGAEQLPALVRNIVESKMSNNALRFFYAVGYKMDYELLRDGFAYRFQRAFPITVTVTSV 148
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPLVQLEK 112
++ + D LVE++ AP D + + +FAE L PLV L K
Sbjct: 149 CRLPKQHSIDEATPVTPNIQLVEVT--APATADNFSDVVPAISSFAEHLSPLVNLSK 203
>gi|302800696|ref|XP_002982105.1| hypothetical protein SELMODRAFT_115735 [Selaginella moellendorffii]
gi|300150121|gb|EFJ16773.1| hypothetical protein SELMODRAFT_115735 [Selaginella moellendorffii]
Length = 219
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR---MKILVSKI 58
G G + P +VR+ ++ S + F +G +MD+E + G+ +R R + + V+ +
Sbjct: 76 GTGAEQLPALVRNIVESKMSNNALRFFYAVGYKMDYELLRDGFAYRFQRAFPITVTVTSV 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPLVQLEK 112
++ + D LVE++ AP D + + +FAE L PLV L K
Sbjct: 136 CRLPKQHSIDEATPVTPNIQLVEVT--APATADNFSDVVPAISSFAEHLSPLVNLSK 190
>gi|238007436|gb|ACR34753.1| unknown [Zea mays]
gi|413936234|gb|AFW70785.1| hypothetical protein ZEAMMB73_295115 [Zea mays]
Length = 144
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR---MKILVSKI 58
G G + +VR+ ++ S V+ + +G ++D E + G+ FR R + + V+
Sbjct: 3 GAGAEQISVLVRTVVESKASKNVLHYFYTLGYKLDHELLKSGFAFRFHRGAQITVTVTSA 62
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPLVQLEK 112
KMS+ +D LVE I AP D + + AF E L PL+ L K
Sbjct: 63 NKMSRLHATDEATPVTPAIQLVE--ITAPAAADNYNDVVSAVTAFCEYLAPLLHLSK 117
>gi|195612876|gb|ACG28268.1| mediator of RNA polymerase II transcription subunit 18 [Zea mays]
Length = 217
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR---MKILVSKI 58
G G + +VR+ ++ S V+ + +G ++D E + G+ FR R + + V+
Sbjct: 76 GAGAEQISVLVRTVVESKASKNVLHYFYTLGYKLDHELLKSGFAFRFHRGAQITVTVTSA 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPLVQLEK 112
KMS+ +D LVE I AP D + + AF E L PL+ L K
Sbjct: 136 NKMSRLHATDEATSVTPAIQLVE--ITAPAAADNYNDVVSAVTAFCEYLAPLLHLSK 190
>gi|219362543|ref|NP_001136991.1| mediator of RNA polymerase II transcription subunit 18 isoform 1
[Zea mays]
gi|194697896|gb|ACF83032.1| unknown [Zea mays]
gi|238014712|gb|ACR38391.1| unknown [Zea mays]
gi|413936236|gb|AFW70787.1| mediator of RNA polymerase II transcription subunit 18 isoform 1
[Zea mays]
gi|413936237|gb|AFW70788.1| mediator of RNA polymerase II transcription subunit 18 isoform 2
[Zea mays]
gi|413936238|gb|AFW70789.1| mediator of RNA polymerase II transcription subunit 18 isoform 3
[Zea mays]
Length = 217
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR---MKILVSKI 58
G G + +VR+ ++ S V+ + +G ++D E + G+ FR R + + V+
Sbjct: 76 GAGAEQISVLVRTVVESKASKNVLHYFYTLGYKLDHELLKSGFAFRFHRGAQITVTVTSA 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPLVQLEK 112
KMS+ +D LVE I AP D + + AF E L PL+ L K
Sbjct: 136 NKMSRLHATDEATPVTPAIQLVE--ITAPAAADNYNDVVSAVTAFCEYLAPLLHLSK 190
>gi|330794603|ref|XP_003285367.1| hypothetical protein DICPUDRAFT_86673 [Dictyostelium purpureum]
gi|325084637|gb|EGC38060.1| hypothetical protein DICPUDRAFT_86673 [Dictyostelium purpureum]
Length = 239
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 11 IVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSG 70
++R+ +DV S T +L +G D+EY GY + + + + + P +
Sbjct: 121 MIRNVVDVRSSETFFIYLDNLGYVKDYEYFVDGYQYSTYNLSLF---LVNHRRVLPDGTK 177
Query: 71 VEPISQSYLVELSILA-PGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRLPLSMA 123
+ +++ +VEL L+ G E + +AE L P V+L K D++ L L A
Sbjct: 178 GDILNKHSMVELQCLSGEEGFVAAAEYLNTYAEYLYPFVELIKFDHRNLTLDNA 231
>gi|218190237|gb|EEC72664.1| hypothetical protein OsI_06213 [Oryza sativa Indica Group]
Length = 220
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR---MKILVSKI 58
G G + +VRS ++ S V+ + +G ++D E + G+ FR R + + V+ +
Sbjct: 76 GAGAEQISVLVRSIVESKASNNVLRYFYGIGYKLDHEVLKGGFAFRFHRGAQITVTVTSV 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKA---FAEQLKPLVQLEK 112
KM++ ++ V LVE I AP D + + A F E L PL+ L K
Sbjct: 136 SKMTKLHATNEAVPITPAIQLVE--ITAPAAADNYNDVVSAVTSFCEYLAPLLHLSK 190
>gi|115444787|ref|NP_001046173.1| Os02g0193900 [Oryza sativa Japonica Group]
gi|46389838|dbj|BAD15401.1| unknown protein [Oryza sativa Japonica Group]
gi|113535704|dbj|BAF08087.1| Os02g0193900 [Oryza sativa Japonica Group]
gi|215678942|dbj|BAG96372.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697505|dbj|BAG91499.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622359|gb|EEE56491.1| hypothetical protein OsJ_05730 [Oryza sativa Japonica Group]
Length = 220
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR---MKILVSKI 58
G G + +VRS ++ S V+ + +G ++D E + G+ FR R + + V+ +
Sbjct: 76 GAGAEQISVLVRSIVESKASNNVLRYFYGIGYKLDHEVLKGGFAFRFHRGAQITVTVTSV 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKA---FAEQLKPLVQLEK 112
KM++ ++ V LVE I AP D + + A F E L PL+ L K
Sbjct: 136 SKMTKLHATNEAVPITPAIQLVE--ITAPAAADNYNDVVSAVTSFCEYLAPLLHLSK 190
>gi|256074570|ref|XP_002573597.1| hypothetical protein [Schistosoma mansoni]
gi|360043591|emb|CCD81137.1| hypothetical protein Smp_133860 [Schistosoma mansoni]
Length = 308
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 13 RSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMS---------- 62
RS +++ + +V FL ++G + +++ G F +GR+K+LV + +++
Sbjct: 182 RSCLEMPVTGPIVSFLYDLGFDYESTFVAEGQEFIRGRVKVLVYTVNEITSFQSIATSNA 241
Query: 63 -------QGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKIDY 115
QG S+S++VE+S++ D + E++ F E L P++ K+D
Sbjct: 242 MGFGFDGQGLAPKDWRRLCSRSWMVEISVVGSPADDHLQEEITDFVELLHPIIVPTKLDT 301
Query: 116 K 116
Sbjct: 302 N 302
>gi|242060840|ref|XP_002451709.1| hypothetical protein SORBIDRAFT_04g006390 [Sorghum bicolor]
gi|241931540|gb|EES04685.1| hypothetical protein SORBIDRAFT_04g006390 [Sorghum bicolor]
Length = 217
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR---MKILVSKI 58
G G + +VR+ ++ S V+ + +G ++D E + G+ FR R + + V+
Sbjct: 76 GAGAEQISVLVRTIVESKASKNVLHYFYTLGYKLDHELLKIGFAFRFHRGAQITVTVTST 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPLVQLEK 112
KM + +D V LVE++ AP D + + AF E L PL+ L K
Sbjct: 136 NKMPRLHATDEAVPVTPGIQLVEIT--APAAADNYNDVVSAVSAFCEYLAPLLHLSK 190
>gi|328866197|gb|EGG14583.1| putative mediator complex subunit 18 [Dictyostelium fasciculatum]
Length = 263
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 11 IVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKI-LVSKIFKMSQGKPSDS 69
++++ +D+ + V + +G + D+EY G + + + LV+ M G+ +
Sbjct: 154 MIKNVVDITVTNKFVGLIETLGYKKDYEYWVEGDCYSTHYLSLYLVTHKRAMPDGRIGEI 213
Query: 70 GVEPISQSYLVELSILA-PGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
G ++S +VEL LA G D + A+AE L P V+L K D++ L
Sbjct: 214 G----TKSKMVELQCLAGEEGFDQAAHYLNAYAEYLYPYVELIKFDHRNL 259
>gi|357138972|ref|XP_003571060.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like, partial [Brachypodium distachyon]
Length = 303
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR---MKILVSKI 58
G G + +VR+ ++ S V+ + +G ++D E + G+ FR R + V+
Sbjct: 162 GAGAEQISVLVRTIVESKASNNVLRYFYGIGYKLDHEVLKVGFAFRFQRGAQFTVTVTSA 221
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQ-DVIGEDMKAFAEQLKPLVQLEK 112
KM + +D V LVE++ A + + + AF E L PL+ L K
Sbjct: 222 NKMPKLHATDEAVAVTPGIQLVEITAPAAANNYNDVASSVTAFCEYLAPLLHLSK 276
>gi|449470019|ref|XP_004152716.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Cucumis sativus]
Length = 217
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR---MKILVSKI 58
G G + +VR+ ++ S V+ +G ++D E + G+ FR R + + VS +
Sbjct: 76 GAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAFRFHRGAHITVTVSSV 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPLVQLEK 112
KM + +D V LVE++ AP D E + F E L PL+ L K
Sbjct: 136 NKMLKLHSTDEAVPVTPGIQLVEVT--APATSDNYSEVAGAVSTFCEYLAPLLHLSK 190
>gi|449496038|ref|XP_004160019.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Cucumis sativus]
Length = 217
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR---MKILVSKI 58
G G + +VR+ ++ S V+ +G ++D E + G+ FR R + + VS +
Sbjct: 76 GAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAFRFHRGAHITVTVSSV 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPLVQLEK 112
KM + +D V LVE++ AP D E + F E L PL+ L K
Sbjct: 136 NKMLKLHSTDEAVPVTPGIQLVEVT--APATSDNYSEVAGAVSTFCEYLAPLLHLSK 190
>gi|66809015|ref|XP_638230.1| hypothetical protein DDB_G0285713 [Dictyostelium discoideum AX4]
gi|74853703|sp|Q54MR3.1|MED18_DICDI RecName: Full=Putative mediator of RNA polymerase II transcription
subunit 18; AltName: Full=Putative mediator complex
subunit 18
gi|60466642|gb|EAL64694.1| hypothetical protein DDB_G0285713 [Dictyostelium discoideum AX4]
Length = 251
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 11 IVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSG 70
++R+ +D+ S T +L +G D+EY GY + + +F ++ + + G
Sbjct: 126 MIRNVVDIKSSETFFIYLENLGYVKDYEYFVDGYQYSTYNL-----SLFLVNHRRVLNDG 180
Query: 71 V--EPISQSYLVELSILA-PGGQDVIGEDMKAFAEQLKPLVQLEKIDYKRL 118
E +++ +VEL L+ G E + +AE L P V+L K D++ L
Sbjct: 181 TKGELLNKHSMVELQCLSGEEGFVAAAEYLNTYAEYLYPFVELIKFDHRLL 231
>gi|255584277|ref|XP_002532875.1| conserved hypothetical protein [Ricinus communis]
gi|223527360|gb|EEF29504.1| conserved hypothetical protein [Ricinus communis]
Length = 217
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMF---RKGRMKILVSKI 58
G G + +VR+ ++ S V+ +G ++D E + G+ F R R+ + VS +
Sbjct: 76 GAGAEQISVLVRTMVESKASKNVLRLFYALGYKLDHELLRVGFAFHFQRGARITVRVSSV 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILA-PGGQDVIGEDMKAFAEQLKPLVQLEK 112
KM + +D V LVE++ A P + + +F E L PL+ L K
Sbjct: 136 NKMLKLHATDEAVPVTPGIQLVEVTAPATPENYSEVVAAVSSFCEYLAPLLHLSK 190
>gi|326494100|dbj|BAJ85512.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516632|dbj|BAJ92471.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 217
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR---MKILVSKI 58
G G + +VR+ ++ S V+ + +G ++D E + G+ FR R + V+
Sbjct: 76 GAGAEQISILVRTIVESKASSNVLRYFYGIGYKLDHEILKVGFAFRFQRGAQFTVTVTSA 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGG--QDVIGEDMKAFAEQLKPLVQLEK 112
KM + +D V+ LVE++ A DV+ + +F E L PL+ L K
Sbjct: 136 NKMPKLHATDEAVQVTPGIQLVEITAPAAANNYNDVV-SAVTSFCEYLAPLLHLSK 190
>gi|225458428|ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
[Vitis vinifera]
gi|302142417|emb|CBI19620.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMF---RKGRMKILVSKI 58
G G + +VR+ ++ S V+ +G R+D E + G+ F R + + VS +
Sbjct: 76 GSGAEQISVLVRTMVESKVSKNVLRLFYALGYRLDHELLRVGFAFHFQRGASITVTVSSV 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPLVQLEK 112
KM + +D V LVE++ AP + E + +F E L PL+ L K
Sbjct: 136 NKMLKLHATDEAVPVTPGIQLVEVT--APASSENYSEVAAAVSSFCEYLAPLLHLSK 190
>gi|351722377|ref|NP_001236730.1| uncharacterized protein LOC100500095 [Glycine max]
gi|255629097|gb|ACU14893.1| unknown [Glycine max]
Length = 217
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMF---RKGRMKILVSKI 58
G G + +VRS ++ S + +G ++D E + G+ F R ++ + VS I
Sbjct: 76 GAGAEQISVLVRSMVESKTSKNALRMFYTLGYKLDHELLRVGFSFNFHRGAQITVTVSSI 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKA---FAEQLKPLVQLEK 112
KM + +D V +VE++ AP + E A F E L PL+ L K
Sbjct: 136 NKMLKLHATDEAVPVTPGIQMVEVT--APATAETYAEVASAVSSFCEYLAPLLHLSK 190
>gi|320162765|gb|EFW39664.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 319
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 20/127 (15%)
Query: 8 RPTIVRSSIDVACSCTVVEFLTE-MGCRMDFEYISRG----YMFRKG-RMKILVSKIFKM 61
R TIVR+ + + S L E G MD E + G ++ G R+ + +S+I ++
Sbjct: 159 RSTIVRAGMLMEASSGAARTLLEATGFGMDHEMLRTGLLCSHLTAAGVRLDVSISRIQRL 218
Query: 62 SQ------GKPSDSGV---EPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPLVQ 109
+Q +P + V P+ S LVE+S L G + I E ++ AE+L PLV
Sbjct: 219 AQPGDVTSAQPLQANVLHDVPLHDSLLVEISAL--GISERIPEIEDEIHLMAEKLAPLVV 276
Query: 110 LEKIDYK 116
L K+D++
Sbjct: 277 LSKVDHR 283
>gi|359807608|ref|NP_001241417.1| uncharacterized protein LOC100803031 [Glycine max]
gi|255638120|gb|ACU19374.1| unknown [Glycine max]
Length = 217
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMF---RKGRMKILVSKI 58
G G + +VRS ++ S + +G ++D E + G+ F R ++ + VS I
Sbjct: 76 GAGAEQISVLVRSMVESKTSKNALRMFYTLGYKLDHELLRVGFSFNFHRGAQITVTVSSI 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDV---IGEDMKAFAEQLKPLVQLEK 112
KM + +D V +VE++ AP + + + +F E L PL+ L K
Sbjct: 136 NKMLKLHATDEAVPVTPGIQMVEVT--APATAETYTEVAAAVSSFCEYLAPLLHLSK 190
>gi|357487623|ref|XP_003614099.1| Mediator of RNA polymerase II transcription subunit [Medicago
truncatula]
gi|355515434|gb|AES97057.1| Mediator of RNA polymerase II transcription subunit [Medicago
truncatula]
Length = 225
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMF---RKGRMKILVSKI 58
G G +VR+ ++ S V+ +G ++D E + G+ F R ++ + VS +
Sbjct: 84 GAGADQISVLVRTMVESKVSKNVLRMFYTLGYKLDHELLRVGFSFKFKRGAQITVRVSSV 143
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPLVQLEK 112
KM + +D V +VE++ AP + E +++F E L PL+ L K
Sbjct: 144 NKMLKLHATDEAVPVTPGIQMVEVT--APASDENYAEVAAAVQSFCEYLAPLLHLSK 198
>gi|388509574|gb|AFK42853.1| unknown [Medicago truncatula]
Length = 217
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMF---RKGRMKILVSKI 58
G G +VR+ ++ S V+ +G ++D E + G+ F R ++ + VS +
Sbjct: 76 GAGADQISVLVRTMVESKVSKNVLRMFYTLGYKLDHELLRVGFSFKFNRGAQITVRVSSV 135
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPLVQLEK 112
KM + +D V +VE++ AP + E +++F E L PL+ L K
Sbjct: 136 NKMLKLHATDEAVPVTPGIQMVEVT--APASDENYAEVAAAVQSFCEYLAPLLHLSK 190
>gi|281208113|gb|EFA82291.1| putative mediator complex subunit 18 [Polysphondylium pallidum
PN500]
Length = 236
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 11 IVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSG 70
++R+ +D++ S ++ + MG D+EY G+ + + + I + S+ P S
Sbjct: 137 VIRNVVDISVSDKFIQLIENMGYVKDYEYYVDGFCYSTYYVSLY---IVQHSRSLPDGSQ 193
Query: 71 VEPISQSYLVELSILA-PGGQDVIGEDMKAFAEQLKPLV 108
E ++++ +VEL L+ G + + +AE L P V
Sbjct: 194 GESLTKNSMVELQCLSGEEGFSQAADYLNTYAEYLYPFV 232
>gi|6686058|sp|O58413.2|VORA_PYRHO RecName: Full=Ketoisovalerate oxidoreductase subunit VorA;
Short=VOR; AltName: Full=2-oxoisovalerate ferredoxin
reductase subunit alpha; AltName: Full=2-oxoisovalerate
oxidoreductase alpha chain
Length = 394
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 58 IFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKID 114
+F ++G ++GV PI + Y+V L GG+D D+KA AE +K +V+ K+D
Sbjct: 333 LFTEAKGALYNTGVRPIMKDYIVGL-----GGRDFTVRDVKAIAEDMKKVVESGKLD 384
>gi|14590562|ref|NP_142630.1| 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
[Pyrococcus horikoshii OT3]
gi|3257088|dbj|BAA29771.1| 397aa long hypothetical ferredoxin oxidoreductase alpha subunit
[Pyrococcus horikoshii OT3]
Length = 397
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 58 IFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKID 114
+F ++G ++GV PI + Y+V L GG+D D+KA AE +K +V+ K+D
Sbjct: 336 LFTEAKGALYNTGVRPIMKDYIVGL-----GGRDFTVRDVKAIAEDMKKVVESGKLD 387
>gi|168066182|ref|XP_001785021.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663406|gb|EDQ50171.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 222
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGR-------MKIL 54
G G P +VR ++ S + F+ +G ++D+E + G+ F+ + + I
Sbjct: 76 GAGADQLPALVRPVLEAGISNNSLRFMYSLGYKLDYEMLRTGFSFQLHKTVPIAVTITIS 135
Query: 55 VSKIFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKA---FAEQLKPLVQLE 111
V+ + ++ + D +P++ L + + AP D E + A AE L PLV L
Sbjct: 136 VTAVHRLPKIHAVDDP-QPVTPG-LQMVQVSAPASPDNYSEVVGAISGLAEYLAPLVHLS 193
Query: 112 K 112
K
Sbjct: 194 K 194
>gi|18399951|ref|NP_565534.1| uncharacterized protein [Arabidopsis thaliana]
gi|75206349|sp|Q9SJZ6.1|MED18_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit
18
gi|4544453|gb|AAD22361.1| expressed protein [Arabidopsis thaliana]
gi|117168219|gb|ABK32192.1| At2g22370 [Arabidopsis thaliana]
gi|330252204|gb|AEC07298.1| uncharacterized protein [Arabidopsis thaliana]
Length = 219
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMF---RKGRMKILVSKI 58
G G +VR+ I+ S + +G ++D E + G+ F R + + VS +
Sbjct: 78 GAGADQISVLVRNMIESKVSKNALRMFYALGYKLDHELLKVGFAFHFQRTAHISVSVSSV 137
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPLVQLEK 112
KM + D V P++ + + + AP + E + +F E L PLV L K
Sbjct: 138 NKMPKVHAIDEAV-PVTPGMQI-VDVTAPATSENYSEVAAAVSSFCEFLAPLVHLSK 192
>gi|356567610|ref|XP_003552010.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Glycine max]
Length = 214
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 11 IVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMF---RKGRMKILVSKIFKMSQGKPS 67
+VRS ++ S + +G ++D E + G+ F R ++ + VS I KM + +
Sbjct: 85 LVRSMVESKTSKNALRMFYTLGYKLDHELLRVGFSFNFHRGAQITVTVSSINKMLKLHAT 144
Query: 68 DSGVEPISQSYLVELSILAPGGQDVIGEDMKA---FAEQLKPLVQLEK 112
D + +VE++ AP + E A F E L PL+ L K
Sbjct: 145 DEAMPVTPGIQMVEVT--APATAETYAEVASAVSSFCEYLAPLLHLSK 190
>gi|18977341|ref|NP_578698.1| 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
[Pyrococcus furiosus DSM 3638]
gi|397651475|ref|YP_006492056.1| 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
[Pyrococcus furiosus COM1]
gi|6686066|sp|Q51801.1|VORA_PYRFU RecName: Full=Ketoisovalerate oxidoreductase subunit VorA;
Short=VOR; AltName: Full=2-oxoisovalerate ferredoxin
reductase subunit alpha; AltName: Full=2-oxoisovalerate
oxidoreductase alpha chain
gi|1197360|emb|CAA59502.1| 2-ketovalerate ferredoxin oxidoreductase alpha-2 [Pyrococcus
furiosus DSM 3638]
gi|18893018|gb|AAL81093.1| 2-ketovalerate ferredoxin oxidoreductase subunit alpha-2
[Pyrococcus furiosus DSM 3638]
gi|393189066|gb|AFN03764.1| 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
[Pyrococcus furiosus COM1]
Length = 394
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 58 IFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKID 114
+F S+G +S P+ ++Y+V L GG+DV +D+KA A+ +K +++ K+D
Sbjct: 333 LFTESKGALYNSSAHPLMKNYIVGL-----GGRDVTVKDIKAIADDMKKVIESGKVD 384
>gi|14521565|ref|NP_127041.1| 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
[Pyrococcus abyssi GE5]
gi|14195413|sp|Q9UYZ1.1|VORA_PYRAB RecName: Full=Ketoisovalerate oxidoreductase subunit VorA;
Short=VOR; AltName: Full=2-oxoisovalerate ferredoxin
reductase subunit alpha; AltName: Full=2-oxoisovalerate
oxidoreductase alpha chain
gi|5458784|emb|CAB50271.1| vorA ketoisovalerate oxidoreductase subunit vorA (EC 1.-.-.-)
[Pyrococcus abyssi GE5]
gi|380742175|tpe|CCE70809.1| TPA: 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
[Pyrococcus abyssi GE5]
Length = 395
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 58 IFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKID 114
+F ++G ++G PI ++Y+V L GG+D D+KA AE +K +++ K+D
Sbjct: 334 LFTEAKGALYNNGARPIMKNYIVGL-----GGRDFTVSDVKAIAEDMKKVIESGKLD 385
>gi|147832794|emb|CAN68215.1| hypothetical protein VITISV_011882 [Vitis vinifera]
Length = 248
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 2 GVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMF---RKGRMKILVSKI 58
G G + +VR+ ++ S V+ +G R+D E + G+ F R + + VS +
Sbjct: 107 GSGAEQISVLVRTMVESKVSKNVLRLFYALGYRLDHELLRVGFAFHFQRGASITVTVSSV 166
Query: 59 FKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGE---DMKAFAEQLKPL 107
KM + +D V LVE++ AP + E + +F E L P
Sbjct: 167 NKMLKLHATDEAVPVTPGIQLVEVT--APASSENYSEVAAAVSSFCEYLAPF 216
>gi|328768299|gb|EGF78346.1| hypothetical protein BATDEDRAFT_90909 [Batrachochytrium
dendrobatidis JAM81]
Length = 218
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 24 VVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSYLVELS 83
V++++ +G + +FE + RG+ F+ G+++I + +++++ S + +S S +
Sbjct: 132 VIKYIEMLGYKFEFEVVRRGFTFQFGQVRIDIFRLYQIQDQFRVSSAIPVVSNSTTWIVQ 191
Query: 84 ILAP--GGQDVI--GEDMKAFAEQL 104
+ +P G + V+ +++ FA L
Sbjct: 192 VTSPILGQEHVVHMSDNLFQFAAHL 216
>gi|332158934|ref|YP_004424213.1| 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
[Pyrococcus sp. NA2]
gi|331034397|gb|AEC52209.1| 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
[Pyrococcus sp. NA2]
Length = 401
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 58 IFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKID 114
+F ++G + GV PI ++Y+V L GG+D +D K AE +K +++ K+D
Sbjct: 340 LFTEAKGVLYNEGVRPIMKNYIVGL-----GGRDFTVKDAKIIAEDMKKIIESGKLD 391
>gi|401425797|ref|XP_003877383.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493628|emb|CBZ28917.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 3788
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 30 EMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSY-LVELSILAPG 88
E CR + +I ++ + +L S I + G +SGV PI ++ L L
Sbjct: 26 ESACRSEGVFIQSTFL----KQLLLGSVIIQFENGYLGESGVGPIIRTLQCAPLRALLLA 81
Query: 89 GQDVIGEDMKAFAEQLKPLVQLEKIDYKRLPLSMA 123
+ EDMK L QLEKID + +PL++
Sbjct: 82 KCALSTEDMKTVCAGLAQHPQLEKIDIRGVPLTIG 116
>gi|375082394|ref|ZP_09729455.1| 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
[Thermococcus litoralis DSM 5473]
gi|374742936|gb|EHR79313.1| 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
[Thermococcus litoralis DSM 5473]
Length = 393
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 58 IFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKID 114
+F ++G ++ +PI ++Y+V + GG+D+ D+KA A+ +K ++Q K+D
Sbjct: 332 LFNEAKGVLYNTDAKPIMKNYIVGI-----GGRDLTVNDVKAIAKNMKEIIQKGKLD 383
>gi|337284150|ref|YP_004623624.1| 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
[Pyrococcus yayanosii CH1]
gi|334900084|gb|AEH24352.1| 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
[Pyrococcus yayanosii CH1]
Length = 394
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 58 IFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLVQLEKID 114
+F ++G ++G+ PI ++Y+V L GG+D +D K A+ ++ L++ K+D
Sbjct: 333 LFNEAKGVLYNTGLRPIMKNYIVGL-----GGRDFTVKDAKVIADDMRKLIERGKLD 384
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,772,869,033
Number of Sequences: 23463169
Number of extensions: 62341787
Number of successful extensions: 127988
Number of sequences better than 100.0: 137
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 127804
Number of HSP's gapped (non-prelim): 137
length of query: 124
length of database: 8,064,228,071
effective HSP length: 90
effective length of query: 34
effective length of database: 5,952,542,861
effective search space: 202386457274
effective search space used: 202386457274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)