BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4206
(97 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q68EW0|OGDHL_XENLA 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Xenopus laevis
GN=ogdhl PE=2 SV=1
Length = 1018
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLP-LEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
++ G HRGRLN+L N++ L +F +F P LE +D G GDVKYHLG Y + ++K
Sbjct: 300 VILGMPHRGRLNVLANVIRKDLDQIFCQFDPKLEASDEGSGDVKYHLGMYHERINRATNK 359
Query: 60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
+TL+L +NPSHLE V PV GKTKA QF
Sbjct: 360 KITLSLVANPSHLEAVDPVVQGKTKAEQF 388
>sp|Q5R9L8|OGDHL_PONAB 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Pongo abelii
GN=OGDHL PE=2 SV=2
Length = 1010
Score = 87.4 bits (215), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLP-LEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
++ G HRGRLN+L N++ L +F +F P LE D G GDVKYHLG Y + +++
Sbjct: 292 VILGMPHRGRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNR 351
Query: 60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
+TL+L +NPSHLE V PV GKTKA QF
Sbjct: 352 NITLSLVANPSHLEAVDPVVQGKTKAEQF 380
>sp|Q9ULD0|OGDHL_HUMAN 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Homo sapiens
GN=OGDHL PE=1 SV=3
Length = 1010
Score = 87.4 bits (215), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLP-LEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
++ G HRGRLN+L N++ L +F +F P LE D G GDVKYHLG Y + +++
Sbjct: 292 VILGMPHRGRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNR 351
Query: 60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
+TL+L +NPSHLE V PV GKTKA QF
Sbjct: 352 NITLSLVANPSHLEAVDPVVQGKTKAEQF 380
>sp|Q148N0|ODO1_BOVIN 2-oxoglutarate dehydrogenase, mitochondrial OS=Bos taurus GN=OGDH
PE=2 SV=1
Length = 1023
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
++ G HRGRLN+L N++ L +F +F LE D G GDVKYHLG Y + +D+
Sbjct: 305 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDR 364
Query: 60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
+TL+L +NPSHLE PV +GKTKA QF
Sbjct: 365 NITLSLVANPSHLEAADPVVMGKTKAEQF 393
>sp|Q6P6Z8|ODO1_XENLA 2-oxoglutarate dehydrogenase, mitochondrial OS=Xenopus laevis
GN=ogdh PE=2 SV=1
Length = 1021
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
++ G HRGRLN+L N++ L +F +F LE TD G GDVKYHLG Y + +D+
Sbjct: 304 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEATDEGSGDVKYHLGMYHRRINRVTDR 363
Query: 60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
+TL+L +NPSHLE PV GKTKA QF
Sbjct: 364 NITLSLVANPSHLEAADPVVQGKTKAEQF 392
>sp|Q5RCB8|ODO1_PONAB 2-oxoglutarate dehydrogenase, mitochondrial OS=Pongo abelii GN=OGDH
PE=2 SV=1
Length = 1023
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
++ G HRGRLN+L N++ L +F +F LE D G GDVKYHLG Y + +D+
Sbjct: 305 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDR 364
Query: 60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
+TL+L +NPSHLE PV +GKTKA QF
Sbjct: 365 NITLSLVANPSHLEAADPVVMGKTKAEQF 393
>sp|Q02218|ODO1_HUMAN 2-oxoglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=OGDH
PE=1 SV=3
Length = 1023
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
++ G HRGRLN+L N++ L +F +F LE D G GDVKYHLG Y + +D+
Sbjct: 305 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDR 364
Query: 60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
+TL+L +NPSHLE PV +GKTKA QF
Sbjct: 365 NITLSLVANPSHLEAADPVVMGKTKAEQF 393
>sp|Q60HE2|ODO1_MACFA 2-oxoglutarate dehydrogenase, mitochondrial OS=Macaca fascicularis
GN=OGDH PE=2 SV=1
Length = 1023
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
++ G HRGRLN+L N++ L +F +F LE D G GDVKYHLG Y + +D+
Sbjct: 305 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDR 364
Query: 60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
+TL+L +NPSHLE PV +GKTKA QF
Sbjct: 365 NITLSLVANPSHLEAADPVVMGKTKAEQF 393
>sp|Q5XI78|ODO1_RAT 2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus
GN=Ogdh PE=1 SV=1
Length = 1023
Score = 85.5 bits (210), Expect = 9e-17, Method: Composition-based stats.
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
++ G HRGRLN+L N++ L +F +F LE D G GD+KYHLG Y + +D+
Sbjct: 305 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDMKYHLGMYHRRINRVTDR 364
Query: 60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
+TL+L +NPSHLE PV +GKTKA QF
Sbjct: 365 NITLSLVANPSHLEAADPVVMGKTKAEQF 393
>sp|Q60597|ODO1_MOUSE 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=Ogdh
PE=1 SV=3
Length = 1023
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRF-LPLEYTDPGDGDVKYHLGAYVKYRTPHSDK 59
++ G HRGRLN+L N++ L +F +F LE D G GD+KYHLG Y + +D+
Sbjct: 305 VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDMKYHLGMYHRRINRVTDR 364
Query: 60 LMTLTLSSNPSHLELVYPVNLGKTKAFQF 88
+TL+L +NPSHLE PV +GKTKA QF
Sbjct: 365 NITLSLVANPSHLEAADPVVMGKTKAEQF 393
>sp|O61199|ODO1_CAEEL 2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis
elegans GN=T22B11.5 PE=1 SV=2
Length = 1029
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 54/89 (60%)
Query: 2 VFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLM 61
V G HRGRLN+L N+ PL + S+F LE D G GDVKYHLG ++ S K +
Sbjct: 311 VIGMPHRGRLNVLANVCRQPLATILSQFSTLEPADEGSGDVKYHLGVCIERLNRQSQKNV 370
Query: 62 TLTLSSNPSHLELVYPVNLGKTKAFQFLS 90
+ + +NPSHLE V PV +GK +A F +
Sbjct: 371 KIAVVANPSHLEAVDPVVMGKVRAEAFYA 399
>sp|Q623T0|ODO1_CAEBR 2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis
briggsae GN=CBG01737 PE=3 SV=1
Length = 1027
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 54/89 (60%)
Query: 2 VFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKLM 61
V G HRGRLN+L N+ PL + S+F LE D G GDVKYHLG ++ S K +
Sbjct: 309 VIGMPHRGRLNVLANVCRQPLATILSQFSTLEPADEGSGDVKYHLGVCIERLNRQSQKNV 368
Query: 62 TLTLSSNPSHLELVYPVNLGKTKAFQFLS 90
+ + +NPSHLE V PV +GK +A F +
Sbjct: 369 KIAVVANPSHLEAVDPVVMGKVRAEAFYA 397
>sp|O74378|ODO1_SCHPO 2-oxoglutarate dehydrogenase, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=kgd1 PE=3 SV=1
Length = 1009
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLE-YTDPGDGDVKYHLGAYVKYRTPHSDK 59
+V G AHRGRLNLL NIV P +FS F + D G GDVKYHLG + TP S K
Sbjct: 298 IVIGMAHRGRLNLLHNIVRKPAQAIFSEFRGTQDPDDEGSGDVKYHLGMNYQRPTP-SGK 356
Query: 60 LMTLTLSSNPSHLELVYPVNLGKTKAFQ 87
++L+L +NPSHLE PV LGK +A Q
Sbjct: 357 RVSLSLVANPSHLEAEDPVVLGKVRAIQ 384
>sp|P20967|ODO1_YEAST 2-oxoglutarate dehydrogenase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=KGD1 PE=1
SV=2
Length = 1014
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD--PGDGDVKYHLGAYVKYRTP-HS 57
+V G AHRGRLN+L+N+V P ++FS F D G GDVKYHLG + Y+ P S
Sbjct: 299 IVLGMAHRGRLNVLSNVVRKPNESIFSEFKGSSARDDIEGSGDVKYHLG--MNYQRPTTS 356
Query: 58 DKLMTLTLSSNPSHLELVYPVNLGKTKAF 86
K + L+L +NPSHLE PV LG+T+A
Sbjct: 357 GKYVNLSLVANPSHLESQDPVVLGRTRAL 385
>sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=ogdh PE=3 SV=1
Length = 1013
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRF----LPLEYTDPGDGDVKYHLGAYVKYRTPH 56
+V G HRGRLN+L N+V PL +F+ F + +E GDVKYHLG R
Sbjct: 295 IVLGMPHRGRLNVLANVVRKPLPAIFNEFNGGVISIEGEYSATGDVKYHLGTSYD-RVTS 353
Query: 57 SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQK 96
S K + L+L +NPSHLE V P+ GK +A Q S +QK
Sbjct: 354 SGKKVHLSLVANPSHLEAVNPLVEGKVRAKQHYSKDTEQK 393
>sp|A3Q3N5|KGD_MYCSJ Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
sp. (strain JLS) GN=kgd PE=3 SV=1
Length = 1264
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL----PLEYTDPGDGDVKYHLGAYVKYRTPH 56
+V G HRGRLN+L NIV P +FS F P + G GDVKYHLG+ Y
Sbjct: 571 VVIGMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAH--GSGDVKYHLGSSGTYLQMF 628
Query: 57 SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQKN 97
D +T++L++NPSHLE V PV G +A Q L + D ++
Sbjct: 629 GDNDITVSLTANPSHLEAVDPVMEGLVRAKQDLLDKGDTED 669
>sp|Q1B4V6|KGD_MYCSS Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
sp. (strain MCS) GN=kgd PE=3 SV=1
Length = 1269
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL----PLEYTDPGDGDVKYHLGAYVKYRTPH 56
+V G HRGRLN+L NIV P +FS F P + G GDVKYHLG+ Y
Sbjct: 576 VVIGMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAH--GSGDVKYHLGSSGTYLQMF 633
Query: 57 SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQKN 97
D +T++L++NPSHLE V PV G +A Q L + D ++
Sbjct: 634 GDNDITVSLTANPSHLEAVDPVMEGLVRAKQDLLDKGDTED 674
>sp|A1UK81|KGD_MYCSK Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
sp. (strain KMS) GN=kgd PE=3 SV=1
Length = 1269
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL----PLEYTDPGDGDVKYHLGAYVKYRTPH 56
+V G HRGRLN+L NIV P +FS F P + G GDVKYHLG+ Y
Sbjct: 576 VVIGMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAH--GSGDVKYHLGSSGTYLQMF 633
Query: 57 SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFLSFRVDQKN 97
D +T++L++NPSHLE V PV G +A Q L + D ++
Sbjct: 634 GDNDITVSLTANPSHLEAVDPVMEGLVRAKQDLLDKGDTED 674
>sp|A6WXF0|ODO1_OCHA4 2-oxoglutarate dehydrogenase E1 component OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=sucA PE=3
SV=1
Length = 1001
Score = 72.8 bits (177), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD---PGDGDVKYHLGAYVKYRTPHS 57
++FG AHRGRLN+L+ ++ P +F F Y G GDVKYHLGA R
Sbjct: 294 IIFGMAHRGRLNVLSQVMGKPHRAIFHEFKGGSYAPDDVEGSGDVKYHLGASSD-REFDG 352
Query: 58 DKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
+K+ L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 353 NKVH-LSLTANPSHLEIVNPVVMGKARAKQDL 383
>sp|A5VSQ0|ODO1_BRUO2 2-oxoglutarate dehydrogenase E1 component OS=Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512) GN=sucA PE=3 SV=1
Length = 1004
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD---PGDGDVKYHLGAYVKYRTPHS 57
+V G AHRGRLN+L+ ++ P +F F YT G GDVKYHLGA R
Sbjct: 298 VVLGMAHRGRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSD-REFDG 356
Query: 58 DKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
+K+ L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 357 NKVH-LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|Q8FYF7|ODO1_BRUSU 2-oxoglutarate dehydrogenase E1 component OS=Brucella suis biovar 1
(strain 1330) GN=sucA PE=3 SV=1
Length = 1004
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD---PGDGDVKYHLGAYVKYRTPHS 57
+V G AHRGRLN+L+ ++ P +F F YT G GDVKYHLGA R
Sbjct: 298 VVLGMAHRGRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSD-REFDG 356
Query: 58 DKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
+K+ L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 357 NKVH-LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|Q8YJE4|ODO1_BRUME 2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=sucA
PE=3 SV=1
Length = 1004
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD---PGDGDVKYHLGAYVKYRTPHS 57
+V G AHRGRLN+L+ ++ P +F F YT G GDVKYHLGA R
Sbjct: 298 VVLGMAHRGRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSD-REFDG 356
Query: 58 DKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
+K+ L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 357 NKVH-LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|C0RFG8|ODO1_BRUMB 2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis
biotype 2 (strain ATCC 23457) GN=sucA PE=3 SV=1
Length = 1004
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD---PGDGDVKYHLGAYVKYRTPHS 57
+V G AHRGRLN+L+ ++ P +F F YT G GDVKYHLGA R
Sbjct: 298 VVLGMAHRGRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSD-REFDG 356
Query: 58 DKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
+K+ L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 357 NKVH-LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|Q57AX5|ODO1_BRUAB 2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus
biovar 1 (strain 9-941) GN=sucA PE=3 SV=1
Length = 1004
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD---PGDGDVKYHLGAYVKYRTPHS 57
+V G AHRGRLN+L+ ++ P +F F YT G GDVKYHLGA R
Sbjct: 298 VVLGMAHRGRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSD-REFDG 356
Query: 58 DKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
+K+ L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 357 NKVH-LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|Q2YLS2|ODO1_BRUA2 2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus
(strain 2308) GN=sucA PE=3 SV=1
Length = 1004
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD---PGDGDVKYHLGAYVKYRTPHS 57
+V G AHRGRLN+L+ ++ P +F F YT G GDVKYHLGA R
Sbjct: 298 VVLGMAHRGRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSD-REFDG 356
Query: 58 DKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
+K+ L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 357 NKVH-LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|B2S877|ODO1_BRUA1 2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus
(strain S19) GN=sucA PE=3 SV=1
Length = 1004
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD---PGDGDVKYHLGAYVKYRTPHS 57
+V G AHRGRLN+L+ ++ P +F F YT G GDVKYHLGA R
Sbjct: 298 VVLGMAHRGRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSD-REFDG 356
Query: 58 DKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
+K+ L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 357 NKVH-LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|B0CIS7|ODO1_BRUSI 2-oxoglutarate dehydrogenase E1 component OS=Brucella suis (strain
ATCC 23445 / NCTC 10510) GN=sucA PE=3 SV=1
Length = 1004
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD---PGDGDVKYHLGAYVKYRTPHS 57
+V G AHRGRLN+L+ ++ P +F F YT G GDVKYHLGA R
Sbjct: 298 VVLGMAHRGRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSD-REFDG 356
Query: 58 DKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
+K+ L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 357 NKVH-LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|A9M8Q9|ODO1_BRUC2 2-oxoglutarate dehydrogenase E1 component OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=sucA PE=3 SV=1
Length = 1004
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD---PGDGDVKYHLGAYVKYRTPHS 57
+V G AHRGRLN+L+ ++ P +F F YT G GDVKYHLGA R
Sbjct: 298 VVLGMAHRGRLNVLSQVMGKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSD-REFDG 356
Query: 58 DKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
+K+ L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 357 NKVH-LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|Q8F6S7|ODO1_LEPIN 2-oxoglutarate dehydrogenase E1 component OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
GN=sucA PE=3 SV=1
Length = 920
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGD---GDVKYHLGAYVKYRTPHS 57
+V G AHRGRLN+L NI+ P +F+ F E TD + DVKYHLG Y R S
Sbjct: 238 LVIGMAHRGRLNVLVNIIEKPASLIFAEF--EEKTDKDNLSYADVKYHLG-YSNSRMTTS 294
Query: 58 DKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
K + L+L+ NPSHLE V PV G +A Q L
Sbjct: 295 GKEVKLSLAFNPSHLECVDPVVTGSVRARQTL 326
>sp|Q72PJ7|ODO1_LEPIC 2-oxoglutarate dehydrogenase E1 component OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar copenhageni
(strain Fiocruz L1-130) GN=sucA PE=3 SV=1
Length = 920
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGD---GDVKYHLGAYVKYRTPHS 57
+V G AHRGRLN+L NI+ P +F+ F E TD + DVKYHLG Y R S
Sbjct: 238 LVIGMAHRGRLNVLVNIIEKPASLIFAEF--EEKTDKDNLSYADVKYHLG-YSNSRMTTS 294
Query: 58 DKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
K + L+L+ NPSHLE V PV G +A Q L
Sbjct: 295 GKEVKLSLAFNPSHLECVDPVVTGSVRARQTL 326
>sp|C5D802|ODO1_GEOSW 2-oxoglutarate dehydrogenase E1 component OS=Geobacillus sp.
(strain WCH70) GN=odhA PE=3 SV=1
Length = 952
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 13/96 (13%)
Query: 4 GSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD--PGDG----------DVKYHLGAYVK 51
G AHRGRLN+L +++ P +F+ F E D P +G DVKYHLGA +
Sbjct: 253 GMAHRGRLNVLAHVLGKPYEMIFAEFQHAESKDFMPSEGSVAITYGWTGDVKYHLGAARR 312
Query: 52 YRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKAFQ 87
R ++ M +TL++NPSHLE+V PV LG T+A Q
Sbjct: 313 LRN-KNEHTMRITLANNPSHLEVVNPVVLGFTRAAQ 347
>sp|Q73WX4|KGD_MYCPA Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
paratuberculosis (strain ATCC BAA-968 / K-10) GN=kgd
PE=3 SV=1
Length = 1247
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/93 (46%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL----PLEYTDPGDGDVKYHLGAYVKYRTPH 56
+V G HRGRLN+L NIV P +FS F P + G GDVKYHLGA Y
Sbjct: 551 VVIGMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPAQAH--GSGDVKYHLGATGVYLQMF 608
Query: 57 SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
D + ++L++NPSHLE V PV G +A Q L
Sbjct: 609 GDNDIQVSLTANPSHLEAVDPVLEGLVRAKQDL 641
>sp|Q8NRC3|ODO12_CORGL 2-oxoglutarate dehydrogenase E1/E2 component OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=odhA PE=1 SV=2
Length = 1221
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL-PLEYTD-PGDGDVKYHLGAYVKYRTPHSD 58
+V G HRGRLN+L NIV PL ++F+ F +E G GDVKYHLG+ ++ D
Sbjct: 537 VVIGMPHRGRLNVLFNIVGKPLASIFNEFEGQMEQGQIGGSGDVKYHLGSEGQHLQMFGD 596
Query: 59 KLMTLTLSSNPSHLELVYPVNLGKTKAFQ-FLSFRVDQK 96
+ ++L++NPSHLE V PV G +A Q +L VD K
Sbjct: 597 GEIKVSLTANPSHLEAVNPVMEGIVRAKQDYLDKGVDGK 635
>sp|A0PVU7|KGD_MYCUA Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
ulcerans (strain Agy99) GN=kgd PE=3 SV=1
Length = 1238
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/93 (46%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL----PLEYTDPGDGDVKYHLGAYVKYRTPH 56
+V G HRGRLN+L NIV P +FS F P + G GDVKYHLGA Y
Sbjct: 542 VVIGMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAH--GSGDVKYHLGATGVYLQMF 599
Query: 57 SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
D + ++L++NPSHLE V PV G +A Q L
Sbjct: 600 GDNDIQVSLTANPSHLEAVDPVLEGLVRAKQDL 632
>sp|Q89AJ7|ODO1_BUCBP Oxoglutarate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=sucA PE=3 SV=1
Length = 916
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
++FG +HRGRLN+L NI+ P+ +F+ F + GDVKYH+G + +T K+
Sbjct: 235 IIFGMSHRGRLNVLANILDKPIKTIFNEFCENNSNNFNSGDVKYHMG-FCCTKTIGLRKI 293
Query: 61 MTLTLSSNPSHLELVYPVNLGKTKAF 86
+ L L SNPSHLE++ PV +G ++A+
Sbjct: 294 I-LDLKSNPSHLEVINPVVVGSSRAY 318
>sp|Q5L172|ODO1_GEOKA 2-oxoglutarate dehydrogenase E1 component OS=Geobacillus
kaustophilus (strain HTA426) GN=odhA PE=3 SV=1
Length = 950
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 4 GSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTD--PGDG----------DVKYHLGAYVK 51
G AHRGRLN+L +++ P +F+ F E + P +G DVKYHLGA +
Sbjct: 252 GMAHRGRLNVLAHVLGKPYEMIFAEFQHAESKNFIPSEGSVAITYGWTGDVKYHLGAARR 311
Query: 52 YRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKAFQ 87
R S M +TL++NPSHLE+V PV LG T+A Q
Sbjct: 312 LRN-QSAHTMRITLANNPSHLEVVNPVVLGYTRAAQ 346
>sp|Q49XM5|ODO1_STAS1 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=odhA PE=3 SV=1
Length = 933
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 3 FGSAHRGRLNLLTNIVHAPLVNVFS--------RFLP----LEYTDPGDGDVKYHLGAYV 50
G AHRGRLN+LT+++ P + S +FLP L+ T GDVKYHLG
Sbjct: 239 IGMAHRGRLNVLTHVLEKPYEMMISEFMHIDPMKFLPEDGSLQLTSGWTGDVKYHLGGVK 298
Query: 51 KYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKAFQ 87
++ S++ ++L++NPSHLE+V PV LGKT+A Q
Sbjct: 299 TTQSYGSEQ--RISLANNPSHLEIVAPVVLGKTRANQ 333
>sp|O50463|KGD_MYCTU Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
tuberculosis GN=kgd PE=1 SV=4
Length = 1231
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL----PLEYTDPGDGDVKYHLGAYVKYRTPH 56
+V G HRGRLN+L NIV P +F+ F P + G GDVKYHLGA Y
Sbjct: 535 VVIGMPHRGRLNVLANIVGKPYSQIFTEFEGNLNPSQAH--GSGDVKYHLGATGLYLQMF 592
Query: 57 SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
D + ++L++NPSHLE V PV G +A Q L
Sbjct: 593 GDNDIQVSLTANPSHLEAVDPVLEGLVRAKQDL 625
>sp|A5U1U6|KGD_MYCTA Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=kgd PE=3
SV=2
Length = 1231
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL----PLEYTDPGDGDVKYHLGAYVKYRTPH 56
+V G HRGRLN+L NIV P +F+ F P + G GDVKYHLGA Y
Sbjct: 535 VVIGMPHRGRLNVLANIVGKPYSQIFTEFEGNLNPSQAH--GSGDVKYHLGATGLYLQMF 592
Query: 57 SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
D + ++L++NPSHLE V PV G +A Q L
Sbjct: 593 GDNDIQVSLTANPSHLEAVDPVLEGLVRAKQDL 625
>sp|A1KI36|KGD_MYCBP Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
bovis (strain BCG / Pasteur 1173P2) GN=kgd PE=3 SV=2
Length = 1231
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL----PLEYTDPGDGDVKYHLGAYVKYRTPH 56
+V G HRGRLN+L NIV P +F+ F P + G GDVKYHLGA Y
Sbjct: 535 VVIGMPHRGRLNVLANIVGKPYSQIFTEFEGNLNPSQAH--GSGDVKYHLGATGLYLQMF 592
Query: 57 SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
D + ++L++NPSHLE V PV G +A Q L
Sbjct: 593 GDNDIQVSLTANPSHLEAVDPVLEGLVRAKQDL 625
>sp|Q7U0A6|KGD_MYCBO Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=kgd PE=3 SV=2
Length = 1231
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL----PLEYTDPGDGDVKYHLGAYVKYRTPH 56
+V G HRGRLN+L NIV P +F+ F P + G GDVKYHLGA Y
Sbjct: 535 VVIGMPHRGRLNVLANIVGKPYSQIFTEFEGNLNPSQAH--GSGDVKYHLGATGLYLQMF 592
Query: 57 SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
D + ++L++NPSHLE V PV G +A Q L
Sbjct: 593 GDNDIQVSLTANPSHLEAVDPVLEGLVRAKQDL 625
>sp|A0R2B1|KGD_MYCS2 Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=kgd PE=1
SV=1
Length = 1227
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL----PLEYTDPGDGDVKYHLGAYVKYRTPH 56
+V HRGRLN+L NIV P +FS F P + G GDVKYHLGA Y
Sbjct: 533 VVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAH--GSGDVKYHLGATGTYIQMF 590
Query: 57 SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
D + ++L++NPSHLE V PV G +A Q L
Sbjct: 591 GDNDIEVSLTANPSHLEAVDPVLEGLVRAKQDL 623
>sp|Q4L6C4|ODO1_STAHJ 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=odhA PE=3 SV=1
Length = 934
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 3 FGSAHRGRLNLLTNIVHAPLVNVFS--------RFLP----LEYTDPGDGDVKYHLGAYV 50
G AHRGRLN+LT+++ P + S +FLP LE T GDVKYHLG V
Sbjct: 241 IGMAHRGRLNVLTHVLEKPYEMMISEFMHTDPMKFLPEDGSLELTAGWTGDVKYHLGG-V 299
Query: 51 KYRTPHSDKLMTLTLSSNPSHLELVYPVNLGKTKAFQ 87
K + + + ++L++NPSHLE+V PV +GKT+A Q
Sbjct: 300 KTTSSYGIE-QRISLANNPSHLEIVAPVVIGKTRASQ 335
>sp|A1TDK2|KGD_MYCVP Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
vanbaalenii (strain DSM 7251 / PYR-1) GN=kgd PE=3 SV=2
Length = 1243
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL----PLEYTDPGDGDVKYHLGAYVKYRTPH 56
+V G HRGRLN+L NIV P +F+ F P + G GDVKYHLGA Y
Sbjct: 551 VVIGMPHRGRLNVLANIVGKPYSQIFTEFEGNLNPSQAH--GSGDVKYHLGANGTYIQMF 608
Query: 57 SDKLMTLTLSSNPSHLELVYPVNLGKTKAFQ 87
D + ++L +NPSHLE V PV G +A Q
Sbjct: 609 GDNDIDVSLVANPSHLEAVDPVLEGLVRAKQ 639
>sp|P0AFG3|ODO1_ECOLI 2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli
(strain K12) GN=sucA PE=1 SV=1
Length = 933
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
+V G AHRGRLN+L N++ ++F F G GDVKYH+G ++T L
Sbjct: 254 VVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQT--DGGL 311
Query: 61 MTLTLSSNPSHLELVYPVNLGKTKA 85
+ L L+ NPSHLE+V PV +G +A
Sbjct: 312 VHLALAFNPSHLEIVSPVVIGSVRA 336
>sp|P0AFG4|ODO1_ECOL6 2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=sucA PE=3 SV=1
Length = 933
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
+V G AHRGRLN+L N++ ++F F G GDVKYH+G ++T L
Sbjct: 254 VVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQT--DGGL 311
Query: 61 MTLTLSSNPSHLELVYPVNLGKTKA 85
+ L L+ NPSHLE+V PV +G +A
Sbjct: 312 VHLALAFNPSHLEIVSPVVIGSVRA 336
>sp|P0AFG5|ODO1_ECO57 2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli
O157:H7 GN=sucA PE=3 SV=1
Length = 933
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFLPLEYTDPGDGDVKYHLGAYVKYRTPHSDKL 60
+V G AHRGRLN+L N++ ++F F G GDVKYH+G ++T L
Sbjct: 254 VVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQT--DGGL 311
Query: 61 MTLTLSSNPSHLELVYPVNLGKTKA 85
+ L L+ NPSHLE+V PV +G +A
Sbjct: 312 VHLALAFNPSHLEIVSPVVIGSVRA 336
>sp|Q92J42|ODO1_RICCN 2-oxoglutarate dehydrogenase E1 component OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=sucA PE=3 SV=1
Length = 928
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL-----PLEYTDPGDGDVKYHLGAYVKYRTP 55
+V G AHRGRLN LT +V P V + F+ P E GDVKYHLG Y RT
Sbjct: 246 IVIGMAHRGRLNTLTKVVGKPYKAVIADFISGSVFPDELNV--SGDVKYHLG-YSSDRT- 301
Query: 56 HSDKLMTLTLSSNPSHLELVYPVNLGKTKAFQ 87
DK + L+L+ NPSHLE V P+ GK +A Q
Sbjct: 302 LEDKKIHLSLADNPSHLEAVNPIVAGKVRAKQ 333
>sp|Q9CC97|KGD_MYCLE Multifunctional 2-oxoglutarate metabolism enzyme OS=Mycobacterium
leprae (strain TN) GN=kgd PE=3 SV=2
Length = 1238
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRFL-----PLEYTDPGDGDVKYHLGAYVKYRTP 55
+V G HRGRLN+L NIV P +F+ F L ++ GDVKYHLGA Y
Sbjct: 544 VVIGMPHRGRLNVLANIVGKPYSQIFTEFEGNLNPTLAHSS---GDVKYHLGATGLYLQM 600
Query: 56 HSDKLMTLTLSSNPSHLELVYPVNLGKTKAFQFL 89
D + ++L++NPSHLE V PV G +A Q L
Sbjct: 601 FGDNDIQVSLTANPSHLEAVDPVLEGLVRAKQDL 634
>sp|Q8K9N3|ODO1_BUCAP 2-oxoglutarate dehydrogenase E1 component OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=sucA PE=3 SV=1
Length = 923
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 1 MVFGSAHRGRLNLLTNIVHAPLVNVFSRF----LPLEYTDPGDGDVKYHLGAYVKYRTPH 56
++ G AHRGRLN+L N+++ +F+ F +P EY+ GDVKYH+G K + +
Sbjct: 247 IILGMAHRGRLNVLVNVLNKNPQVLFNEFSGINIPKEYS----GDVKYHMGGITKIK--N 300
Query: 57 SDKLMTLTLSSNPSHLELVYPVNLGKTKA 85
K + L L+ NPSHLE+V PV LG +A
Sbjct: 301 DKKKIYLKLAYNPSHLEIVNPVVLGIARA 329
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,341,643
Number of Sequences: 539616
Number of extensions: 1459552
Number of successful extensions: 2531
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2238
Number of HSP's gapped (non-prelim): 130
length of query: 97
length of database: 191,569,459
effective HSP length: 66
effective length of query: 31
effective length of database: 155,954,803
effective search space: 4834598893
effective search space used: 4834598893
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)