RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4206
         (97 letters)



>d1kfia4 d.129.2.1 (A:444-572) Exocytosis-sensitive
          phosphoprotein, pp63/parafusin {Paramecium tetraurelia
          [TaxId: 5888]}
          Length = 129

 Score = 23.1 bits (50), Expect = 5.2
 Identities = 6/20 (30%), Positives = 9/20 (45%)

Query: 33 EYTDPGDGDVKYHLGAYVKY 52
          +Y DP D  V  + G    +
Sbjct: 44 DYVDPVDQSVSKNQGVRFVF 63


>d3pmga4 d.129.2.1 (A:421-561) Phosphoglucomutase {Rabbit
          (Oryctolagus cuniculus) [TaxId: 9986]}
          Length = 141

 Score = 23.1 bits (50), Expect = 5.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 33 EYTDPGDGDVKYHLGAYVKY 52
          EY DP DG V  + G  + +
Sbjct: 54 EYHDPVDGSVSKNQGLRLIF 73


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.139    0.414 

Gapped
Lambda     K      H
   0.267   0.0689    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 342,222
Number of extensions: 13281
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 5
Length of query: 97
Length of database: 2,407,596
Length adjustment: 59
Effective length of query: 38
Effective length of database: 1,597,526
Effective search space: 60705988
Effective search space used: 60705988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.0 bits)