Query psy4209
Match_columns 856
No_of_seqs 480 out of 3578
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 19:38:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4209.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4209hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yic_A 2-oxoglutarate decarbox 100.0 9E-126 3E-130 1148.2 47.8 556 1-583 301-868 (868)
2 2xt6_A 2-oxoglutarate decarbox 100.0 6E-125 2E-129 1165.7 48.5 556 1-583 546-1113(1113)
3 2jgd_A 2-oxoglutarate dehydrog 100.0 5E-118 2E-122 1085.9 47.9 559 1-584 372-932 (933)
4 1qs0_B 2-oxoisovalerate dehydr 100.0 1.1E-45 3.7E-50 408.4 24.3 317 222-583 4-334 (338)
5 2ozl_B PDHE1-B, pyruvate dehyd 100.0 6.9E-46 2.4E-50 410.3 20.8 296 222-562 16-316 (341)
6 1umd_B E1-beta, 2-OXO acid deh 100.0 1.4E-45 4.7E-50 405.3 22.8 313 222-582 3-319 (324)
7 2bfd_B 2-oxoisovalerate dehydr 100.0 3.4E-45 1.1E-49 405.1 21.7 315 221-583 19-338 (342)
8 1ik6_A Pyruvate dehydrogenase; 100.0 5.6E-45 1.9E-49 406.8 21.4 312 222-583 50-365 (369)
9 1w85_B Pyruvate dehydrogenase 100.0 2.2E-43 7.5E-48 387.9 23.6 306 230-582 10-319 (324)
10 3mos_A Transketolase, TK; thia 100.0 5E-42 1.7E-46 405.9 27.8 418 7-565 171-595 (616)
11 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 6.6E-40 2.3E-44 389.0 27.8 279 236-581 332-615 (621)
12 1gpu_A Transketolase; transfer 100.0 1.5E-38 5.2E-43 380.2 29.4 418 8-535 176-627 (680)
13 2o1x_A 1-deoxy-D-xylulose-5-ph 100.0 8.2E-38 2.8E-42 371.5 26.7 281 236-583 335-620 (629)
14 2e6k_A Transketolase; structur 100.0 1.5E-38 5E-43 378.8 19.3 400 8-535 178-614 (651)
15 1r9j_A Transketolase; domains, 100.0 1.2E-36 4.1E-41 363.3 28.3 408 8-535 176-618 (673)
16 3rim_A Transketolase, TK; TPP, 100.0 6.6E-36 2.3E-40 356.0 30.4 407 7-528 195-652 (700)
17 2r8o_A Transketolase 1, TK 1; 100.0 1E-36 3.5E-41 364.0 21.1 421 7-533 173-621 (669)
18 1itz_A Transketolase; calvin c 100.0 9.5E-36 3.3E-40 355.8 28.9 424 7-556 186-646 (675)
19 3uk1_A Transketolase; structur 100.0 1.1E-35 3.6E-40 355.1 27.7 414 8-535 215-670 (711)
20 3kom_A Transketolase; rossmann 100.0 1.2E-34 4.2E-39 344.5 32.3 416 9-535 177-622 (663)
21 3m49_A Transketolase; alpha-be 100.0 5.9E-35 2E-39 348.0 25.7 406 8-530 200-645 (690)
22 3l84_A Transketolase; TKT, str 100.0 5E-34 1.7E-38 337.4 23.1 395 8-531 171-592 (632)
23 2ozl_A PDHE1-A type I, pyruvat 100.0 7E-31 2.4E-35 292.2 17.0 155 11-168 192-348 (365)
24 1w85_A Pyruvate dehydrogenase 100.0 5.6E-31 1.9E-35 293.6 15.8 155 11-166 194-350 (368)
25 1qs0_A 2-oxoisovalerate dehydr 100.0 1.2E-30 4.2E-35 293.9 15.6 159 7-167 230-396 (407)
26 2bfd_A 2-oxoisovalerate dehydr 100.0 2E-30 6.9E-35 292.0 14.9 185 7-204 211-396 (400)
27 1umd_A E1-alpha, 2-OXO acid de 100.0 2.2E-29 7.6E-34 281.0 16.3 158 7-166 193-351 (367)
28 2jgd_A 2-oxoglutarate dehydrog 100.0 4.2E-30 1.4E-34 313.6 11.0 180 638-841 11-191 (933)
29 2qtc_A Pyruvate dehydrogenase 99.9 3.2E-27 1.1E-31 287.3 17.7 412 10-515 251-776 (886)
30 2xt6_A 2-oxoglutarate decarbox 99.8 4.6E-21 1.6E-25 238.3 13.6 157 640-842 201-357 (1113)
31 2yic_A 2-oxoglutarate decarbox 99.8 7.4E-20 2.5E-24 222.5 9.8 104 724-842 7-112 (868)
32 1yd7_A 2-keto acid:ferredoxin 99.8 1.7E-19 5.9E-24 203.1 4.5 237 280-557 62-377 (395)
33 2c42_A Pyruvate-ferredoxin oxi 99.6 9.1E-15 3.1E-19 184.2 17.0 221 276-532 46-335 (1231)
34 3ahc_A Phosphoketolase, xylulo 99.3 5.5E-12 1.9E-16 151.8 14.1 244 284-558 491-757 (845)
35 4feg_A Pyruvate oxidase; carba 98.9 2E-09 6.7E-14 127.4 9.3 115 11-130 466-597 (603)
36 3ju3_A Probable 2-oxoacid ferr 98.5 1.5E-07 5.1E-12 88.3 7.8 92 460-558 13-104 (118)
37 1v5e_A Pyruvate oxidase; oxido 96.9 0.0016 5.5E-08 76.6 9.1 73 11-86 459-541 (590)
38 1q6z_A BFD, BFDC, benzoylforma 96.5 0.00079 2.7E-08 78.0 2.6 68 11-84 447-525 (528)
39 2pan_A Glyoxylate carboligase; 96.5 0.0029 1E-07 74.7 7.5 51 34-86 532-582 (616)
40 3hww_A 2-succinyl-5-enolpyruvy 96.1 0.0039 1.3E-07 72.8 5.3 68 11-84 461-539 (556)
41 1ozh_A ALS, acetolactate synth 96.1 0.003 1E-07 73.9 4.0 69 11-85 466-544 (566)
42 2uz1_A Benzaldehyde lyase; thi 95.8 0.013 4.4E-07 68.4 7.7 68 11-84 467-546 (563)
43 2iht_A Carboxyethylarginine sy 95.8 0.008 2.7E-07 70.4 6.0 68 11-84 482-561 (573)
44 2nxw_A Phenyl-3-pyruvate decar 95.7 0.0081 2.8E-07 70.2 5.8 67 12-84 470-542 (565)
45 2vbi_A Pyruvate decarboxylase; 95.6 0.0093 3.2E-07 69.7 5.5 67 12-84 457-533 (566)
46 1t9b_A Acetolactate synthase, 95.5 0.02 6.8E-07 68.6 8.1 69 12-86 561-639 (677)
47 2vbf_A Branched-chain alpha-ke 95.5 0.015 5.2E-07 67.9 6.9 68 12-84 473-551 (570)
48 2q28_A Oxalyl-COA decarboxylas 95.5 0.024 8.2E-07 66.1 8.5 70 11-86 466-546 (564)
49 2c31_A Oxalyl-COA decarboxylas 95.4 0.025 8.4E-07 66.1 8.1 69 11-85 471-548 (568)
50 2wvg_A PDC, pyruvate decarboxy 95.3 0.015 5.3E-07 67.8 6.3 69 11-84 460-541 (568)
51 2pgn_A Cyclohexane-1,2-dione h 95.3 0.0068 2.3E-07 71.2 3.0 70 11-86 470-549 (589)
52 1ybh_A Acetolactate synthase, 95.2 0.024 8.1E-07 66.6 7.3 47 34-86 514-560 (590)
53 2vk8_A Pyruvate decarboxylase 95.1 0.011 3.9E-07 68.8 4.1 69 11-84 463-542 (563)
54 1ovm_A Indole-3-pyruvate decar 94.9 0.025 8.4E-07 65.8 6.4 68 11-84 454-532 (552)
55 2x7j_A 2-succinyl-5-enolpyruvy 94.8 0.0096 3.3E-07 70.2 2.4 67 12-84 502-580 (604)
56 3eya_A Pyruvate dehydrogenase 94.7 0.042 1.4E-06 63.9 7.6 69 12-86 454-531 (549)
57 3lq1_A 2-succinyl-5-enolpyruvy 94.3 0.033 1.1E-06 65.2 5.4 68 11-84 480-560 (578)
58 2c42_A Pyruvate-ferredoxin oxi 80.0 2.7 9.1E-05 53.6 7.9 48 34-85 1022-1071(1231)
59 1bwx_A Parathyroid hormone; pe 44.5 11 0.00038 28.0 2.0 20 824-843 14-33 (39)
60 4hhu_A OR280; engineered prote 40.1 34 0.0012 31.4 4.9 40 44-88 83-122 (170)
61 2zzd_B Thiocyanate hydrolase s 38.4 46 0.0016 32.3 5.9 32 112-143 113-144 (157)
62 4hhu_A OR280; engineered prote 34.0 48 0.0017 30.4 4.9 95 44-151 2-115 (170)
63 2kl8_A OR15; structural genomi 31.2 47 0.0016 27.3 3.9 36 48-88 5-40 (85)
64 1et1_A Parathyroid hormone; he 23.8 15 0.00053 26.5 -0.1 17 824-840 14-30 (34)
65 2e62_A Protein AT5G25060; CWF2 23.6 1.5E+02 0.0053 24.1 5.6 33 112-144 25-57 (61)
No 1
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=8.7e-126 Score=1148.23 Aligned_cols=556 Identities=43% Similarity=0.728 Sum_probs=512.0
Q ss_pred CCCCCCCccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy4209 1 MAKLEPYNTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDI 80 (856)
Q Consensus 1 ls~l~~y~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~ 80 (856)
|+.+.+|.|||+||||+||||||||++..++++.+++++|++||+|+++|||+|++||++|+++|++|+|+++||+|||+
T Consensus 301 ~A~~~~lp~g~vi~iv~NN~~g~st~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~ar~~~~PvlIe~ 380 (868)
T 2yic_A 301 LALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDM 380 (868)
T ss_dssp TTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHhcCCCCCCeEEEEEcCCcccccCccccccccCHHHHHHhCCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 56788999999999999999999998877788889999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCCCCCCCCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCC
Q psy4209 81 IGYRRHGHNEGDDPSFTQPLMYEKIKQTKPLFEKYTQKLLQEKVITEDMVTLEVQAYQQKLESEYEKSKEATRF-DSAPW 159 (856)
Q Consensus 81 ~tYR~~GHse~D~~~yr~~~e~~~~~~~dpi~~~~~~~Li~~G~~teeel~~i~~~~~~~v~~a~~~A~~~~~p-~~~~~ 159 (856)
+|||++|||++|+|+||+|.||+.|+++++++.+|+++|+++|++|++++++++++++++|++++++|++. .| .+.++
T Consensus 381 ~tyR~~GHs~~D~p~~~~p~~~~~~~~~~dPi~~~~~~L~~~G~~t~ee~~~i~~e~~~~v~~a~~~a~~~-~p~~~~~~ 459 (868)
T 2yic_A 381 LCYRRRGHNEGDDPSMTQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQGQLERVFNEVREL-EKHEIEPS 459 (868)
T ss_dssp ECCCCSCSSTTCCGGGTCHHHHHHHTTCCCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH-HHC-----
T ss_pred EeecCCCcCcccccccCChHHHHHHHhCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Confidence 99999999999999999999999998765455999999999999999999999999999999999999874 22 11122
Q ss_pred --CcCCcCCCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHhhhcchhhHHHHHHHHhhhh
Q psy4209 160 --IDVPWEGFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRVLNQRRKMIEENSLDWAMAEALALGTLL 237 (856)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~l~~r~~~~~~~~idw~~aE~la~~sll 237 (856)
+..+|.+ ....+|+++.+.|+.+++++.++| ++|++|+++.++++.|.+|++++.||||++|+|||||||
T Consensus 460 ~~~~~~~~~-------~~~~~t~~~~~~l~~~~~~~~~~p-~~~~~~~~v~~~~~~R~~m~~~~~i~~a~~e~la~~~l~ 531 (868)
T 2yic_A 460 ESVEADQQI-------PSKLATAVDKAMLQRIGDAHLALP-EGFTVHPRVRPVLEKRREMAYEGRIDWAFAELLALGSLI 531 (868)
T ss_dssp -------------------CCCCCCHHHHHHHHHHTTCCC-TTCCCCTTTHHHHHHHHHHHHHCCBCHHHHHHHHHHHHH
T ss_pred ccccccccc-------ccCCCCccCHHHHHHHHHhhccCC-cccccchhHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 2233322 123568999999999999999999 999999999999999999987677999999999999999
Q ss_pred ccCCeEEEeeccCCCCcccccceeeeecCCCCEeecCccc------ccccCCcEEEccCcchHHHHHHHhhhccCCCCcc
Q psy4209 238 DSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYTPLHHI------GAEAGKFHVYNSILNEMAALSFEYGYSLVDPNFL 311 (856)
Q Consensus 238 ~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L------~~~~g~~rV~nspLsE~~i~G~~~G~a~~g~~~l 311 (856)
.+|++||++||||++|||||||||||||++||+|++|++| .+++|++||+||||||++++||++|||+.|++++
T Consensus 532 ~~~~~V~~~G~Dv~~~Tfs~rh~v~~d~~~g~~~~~~~~l~~~~~~~~~~~p~Rv~ds~IsE~~~vG~a~G~A~~G~~~~ 611 (868)
T 2yic_A 532 AEGKLVRLSGQDTQRGTFTQRHAVIVDRKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGFEYGYSVGNPDAM 611 (868)
T ss_dssp HTTCEEEEEETTTTTCTTSCCCSSEECTTTCCEECGGGGGGBCTTSCBCSCEEEEEECCSCSHHHHHHHHHHHHHCTTSE
T ss_pred hcCCCEEEEcCcCCccchhhcchhccccCCCceecchhhhcccccchhhcCCcEEEECCccHHHHHHHHHHHHccCCCCc
Confidence 9999999999999999999999999999999999999999 8889999999999999999999999999999999
Q ss_pred eeecccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCccCCCCCccCCCCchhhhhhhcCCCCcchhhhhhhhcCCC
Q psy4209 312 VIWEAQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPHGIEGQGPEHSSARPERFLELCSDSPRCVELDMKKQLFDA 391 (856)
Q Consensus 312 ~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~G~~g~Gp~HSsar~Er~lql~~e~~~~~~~~~~~~~~~~ 391 (856)
+|||+|||||+|+||+.+|||++++++||++++||||++||||.|+||+|||+|+|+|||||.. |
T Consensus 612 ~i~eaqf~dF~~~AQ~~~DQ~i~~~~~k~~~~~~vvi~~p~G~~G~Gp~Hs~~~~E~~l~l~~~---------------p 676 (868)
T 2yic_A 612 VLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEGQGPDHTSGRIERFLQLWAE---------------G 676 (868)
T ss_dssp EEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSSSCTTSSCCCHHHHHHHCCT---------------T
T ss_pred eEEEEehHHHHhhHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCCCChhhcCCcHHHHHhcCCC---------------C
Confidence 9999999999999999999999999999999999999999999999999999999999999988 9
Q ss_pred CeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCccccCCCccc---ccCCCCceEEEE
Q psy4209 392 NWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKFRAYLPDTMA---DRNKDKVEKYIL 468 (856)
Q Consensus 392 gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f~~~i~~a~~---~~~~~~v~tvv~ 468 (856)
||+|++||||+|+|||||+|+++++++|||||+||+|||++.+.++++++ +++.|+++||++.+ .++++||+++|+
T Consensus 677 nm~V~~Ps~p~~~~~lLr~a~~~~~~~Pvii~~pk~llR~~~~~~~~~~~-~~~~f~~~ig~~~~~~~l~~g~dv~r~Ii 755 (868)
T 2yic_A 677 SMTIAMPSTPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVSDIRDF-TESKFRSVLEEPMYTDGEGDRNKVTRLLL 755 (868)
T ss_dssp SCEEECCCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCTTSCBCHHHH-HSCCCCSEECCHHHHTSSCCGGGCCEEEE
T ss_pred CCEEEEeCCHHHHHHHHHHHHhcCCCCcEEEEechHHhCCCCCCCCcccc-CCCCceecCCcceeecccccCCceeEEEE
Confidence 99999999999999999999998778999999999999999988887777 66689999999875 467899988999
Q ss_pred cCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHHHHHHHhcCCCCceEEEEecCCCCCCcHHHHHHHHHHhhhhCCC
Q psy4209 469 CSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRAFINDVSSYKNVKQVCWCQSEPENFGFWKYVQARMCSVMEITTD 548 (856)
Q Consensus 469 ~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~i~~sv~kt~~~~~~v~vqEe~~~~G~~~~i~~~i~~~~~~~~~ 548 (856)
|+|++||+|.+|+++.|. ++|+|||||||+|||.++|.++++||++++++|||||+++|+|+|++|+++|.+.+..+..
T Consensus 756 ~~G~~~~~l~aa~~~~g~-i~v~VIdl~~l~Pld~~~i~~~~~k~~~~~~vv~veE~~~~gG~g~~v~~~l~e~~~~l~~ 834 (868)
T 2yic_A 756 TSGKIYYELAARKAKENR-EDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAWPSFGLTLPEILPDHFT 834 (868)
T ss_dssp ECSTHHHHHHHHHHHHTC-TTEEEEEECEEESCCHHHHHHHHHTCTTCCEEEEEEEEETTSTTHHHHHHHHHHHCHHHHT
T ss_pred EecHHHHHHHHHHHhCCC-CCEEEEEeeecCCCCHHHHHHHHHhcCCCceEEEEEeCCCCCCcHHHHHHHHHHHhhhcCC
Confidence 999999999999865554 8999999999999999999999999999988999999999999999999999996654456
Q ss_pred CeEEecCCCCCCCCCCchhhHHHHHHHchHHhhhc
Q psy4209 549 PVCYIGRDPSSVPASGLQAKHYLLAALNMEKKAFK 583 (856)
Q Consensus 549 ~~~~vgr~~~~~pa~g~~~~h~~e~~~i~~~~a~~ 583 (856)
|++|+||+++++||+|+...|.+|+++| |++||+
T Consensus 835 ~v~~vg~~d~~~p~~g~~~~h~~~~~~~-~~~a~~ 868 (868)
T 2yic_A 835 GLKRISRRAMSAPSSGSSKVHAVEQQEI-LDTAFG 868 (868)
T ss_dssp TCEEEEECCCSSSSCSCHHHHHHHHHHH-HHHHTC
T ss_pred CeEEeccCCcCCCCCCCHHHHHHHHHHH-HHHHhC
Confidence 8999999999999999999999999999 999984
No 2
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=5.8e-125 Score=1165.72 Aligned_cols=556 Identities=43% Similarity=0.728 Sum_probs=512.5
Q ss_pred CCCCCCCccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy4209 1 MAKLEPYNTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDI 80 (856)
Q Consensus 1 ls~l~~y~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~ 80 (856)
|+.+.+|.|||+||||+||||||||+++.++++.+++++|++||+|+++|||||++||++|+++|++|+|+++||+|||+
T Consensus 546 ~A~~~~lp~g~vi~iv~NN~~gist~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~~r~~~~PvlIe~ 625 (1113)
T 2xt6_A 546 LALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDM 625 (1113)
T ss_dssp TTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHhhcCCCCCCeEEEEEeCCcccccCccccccccCHHHHHHhcCCcEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 57788999999999999999999999877788888999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCCCCCCCCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCC
Q psy4209 81 IGYRRHGHNEGDDPSFTQPLMYEKIKQTKPLFEKYTQKLLQEKVITEDMVTLEVQAYQQKLESEYEKSKEATRF-DSAPW 159 (856)
Q Consensus 81 ~tYR~~GHse~D~~~yr~~~e~~~~~~~dpi~~~~~~~Li~~G~~teeel~~i~~~~~~~v~~a~~~A~~~~~p-~~~~~ 159 (856)
+|||++|||++|+|+||+|.||+.|+++++++.+|+++|+++|++|++++++++++++++|++++++|++. .| .+.++
T Consensus 626 ~tyR~~GHs~~D~p~~~~~~~~~~~~~~~dpi~~~~~~L~~~G~~t~ee~~~i~~e~~~~v~~a~~~a~~~-~~~~~~~~ 704 (1113)
T 2xt6_A 626 LCYRRRGHNEGDDPSMTQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQGQLERVFNEVREL-EKHEIEPS 704 (1113)
T ss_dssp ECCCCSCSSTTCCGGGTCHHHHHHHTTCCCHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHC----
T ss_pred EeEccCCcCCCCccccCChHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Confidence 99999999999999999999999999765555999999999999999999999999999999999999884 22 21122
Q ss_pred --CcCCcCCCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHhhhcchhhHHHHHHHHhhhh
Q psy4209 160 --IDVPWEGFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRVLNQRRKMIEENSLDWAMAEALALGTLL 237 (856)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~l~~r~~~~~~~~idw~~aE~la~~sll 237 (856)
+.+.|.+. ...+|+++.+.|+.+++++.++| ++|++|+++.+++++|.+|++++.||||++|+|||||||
T Consensus 705 ~~~~~~~~~~-------~~~~t~~~~~~l~~~~~~~~~~p-~~~~~~~~v~~~~~~r~~m~~~~~i~~a~~e~la~~~ll 776 (1113)
T 2xt6_A 705 ESVEADQQIP-------SKLATAVDKAMLQRIGDAHLALP-EGFTVHPRVRPVLEKRREMAYEGRIDWAFAELLALGSLI 776 (1113)
T ss_dssp -------------------CCCCCCHHHHHHHHHHTTCCC-TTCCCCTTTHHHHHHHHHHHHHCCBCHHHHHHHHHHHHH
T ss_pred cccccccccc-------cCCCCccCHHHHHHHHHhhccCC-cccccchhHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 22344321 23568999999999999999999 999999999999999999987667999999999999999
Q ss_pred ccCCeEEEeeccCCCCcccccceeeeecCCCCEeecCccc------ccccCCcEEEccCcchHHHHHHHhhhccCCCCcc
Q psy4209 238 DSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYTPLHHI------GAEAGKFHVYNSILNEMAALSFEYGYSLVDPNFL 311 (856)
Q Consensus 238 ~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L------~~~~g~~rV~nspLsE~~i~G~~~G~a~~g~~~l 311 (856)
.+|++|||+||||+||||||||||+|||++||+|++|++| .++||++||+||||||++++||++|||+.|++++
T Consensus 777 ~~~~~V~l~GeDv~rgtfs~rh~v~~d~~~g~~~~~l~~l~~~~~~~~~~~p~rv~ds~IsE~~~vg~a~G~A~~G~~~~ 856 (1113)
T 2xt6_A 777 AEGKLVRLSGQDTQRGTFTQRHAVIVDRKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGFEYGYSVGNPDAM 856 (1113)
T ss_dssp HTTCEEEEEETTTTTCTTSCCCSSEECTTTCCEECGGGGGGBCTTSCBCSCEEEEEECCSCSHHHHHHHHHHHHHCTTSE
T ss_pred hcCCCEEEEcccCCCccchhcchheecccCCceecchhccccccccchhcCCcEEEECCCCHHHHHHHHHHHHhcCCCCc
Confidence 9999999999999999999999999999999999999999 8889999999999999999999999999999999
Q ss_pred eeecccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCccCCCCCccCCCCchhhhhhhcCCCCcchhhhhhhhcCCC
Q psy4209 312 VIWEAQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPHGIEGQGPEHSSARPERFLELCSDSPRCVELDMKKQLFDA 391 (856)
Q Consensus 312 ~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~G~~g~Gp~HSsar~Er~lql~~e~~~~~~~~~~~~~~~~ 391 (856)
+|||+||+||+|+||+++|||++++++||++++||||++||||.|+||+|||+|+|||||||.. |
T Consensus 857 ~i~Eaqf~dF~~~aQ~~~DQ~i~~~~~k~~~~~~vv~~lp~G~~G~G~~Hs~~~~E~~l~l~~~---------------p 921 (1113)
T 2xt6_A 857 VLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEGQGPDHTSGRIERFLQLWAE---------------G 921 (1113)
T ss_dssp EEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSSSCTTSSCCCHHHHHHHCCT---------------T
T ss_pred eEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCCCCChhhhcccHHHHHhcCCC---------------C
Confidence 9999999999999999999999999999999999999999999999999999999999999988 9
Q ss_pred CeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCccccCCCccc---ccCCCCceEEEE
Q psy4209 392 NWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKFRAYLPDTMA---DRNKDKVEKYIL 468 (856)
Q Consensus 392 gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f~~~i~~a~~---~~~~~~v~tvv~ 468 (856)
||+|++||||+|+|||||+|+++++++|||||+||+|||++.+.++++++ +++.|+++||++.+ .++++||+++|+
T Consensus 922 nm~V~~Ps~~~~~~~lLr~a~~~~~~~Pvii~~pk~L~R~~~~~~~~~~~-~~~~f~~~ig~~~~~~~l~~g~dv~r~iv 1000 (1113)
T 2xt6_A 922 SMTIAMPSTPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVSDIRDF-TESKFRSVLEEPMYTDGEGDRNKVTRLLL 1000 (1113)
T ss_dssp SCEEECCSSHHHHHHHHHHHHHSSCCCCEEEEECSGGGSCSSSCBCHHHH-HSCCCCSEECCHHHHTSCCCSTTCCEEEE
T ss_pred CcEEEecCCHHHHHHHHHHHHhccCCCCEEEEechHHhCCCCCCCccccc-CCCCccccCCcceeeccccCccccCEEEE
Confidence 99999999999999999999988778999999999999999988887777 55689999999875 478999988999
Q ss_pred cCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHHHHHHHhcCCCCceEEEEecCCCCCCcHHHHHHHHHHhhhhCCC
Q psy4209 469 CSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRAFINDVSSYKNVKQVCWCQSEPENFGFWKYVQARMCSVMEITTD 548 (856)
Q Consensus 469 ~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~i~~sv~kt~~~~~~v~vqEe~~~~G~~~~i~~~i~~~~~~~~~ 548 (856)
|+|++||+|++|+++.|. ++|+|||||||+|||.++|.++++||++++++|||||+++|+|+|++|+++|.+.+..+..
T Consensus 1001 ~~G~~~~~l~aa~~~~g~-i~v~VIdl~~l~Pld~~~i~~~~~k~~~~~~vv~veE~~~~gG~gs~v~~~l~e~~~~l~~ 1079 (1113)
T 2xt6_A 1001 TSGKIYYELAARKAKENR-EDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAWPSFGLTLPEILPDHFT 1079 (1113)
T ss_dssp ECSTHHHHHHHHHHHHTC-TTEEEEEESEEESCCHHHHHHHHTTCTTCCEEEEEEEEETTSTTHHHHHHHHHHHSHHHHT
T ss_pred EECHHHHHHHHHHHhCCC-CCEEEEEeeeecCCCHHHHHHHHHhCCCCceEEEEecCCCCCCcHHHHHHHHHHHhhhcCC
Confidence 999999999999866554 8999999999999999999999999999988999999999999999999999996654456
Q ss_pred CeEEecCCCCCCCCCCchhhHHHHHHHchHHhhhc
Q psy4209 549 PVCYIGRDPSSVPASGLQAKHYLLAALNMEKKAFK 583 (856)
Q Consensus 549 ~~~~vgr~~~~~pa~g~~~~h~~e~~~i~~~~a~~ 583 (856)
|++|+||+++++||+|+...|..|+++| |++||+
T Consensus 1080 ~~~~vg~~d~~~p~~g~~~~h~~~~~~~-~~~a~~ 1113 (1113)
T 2xt6_A 1080 GLKRISRRAMSAPSSGSSKVHAVEQQEI-LDTAFG 1113 (1113)
T ss_dssp TCEEEEECCCSSSSCSCHHHHHHHHHHH-HHHHTC
T ss_pred CeEEEccCCcCCCCCCCHHHHhHHHHHH-HHHHhC
Confidence 8999999999999999999999999999 999984
No 3
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=4.6e-118 Score=1085.91 Aligned_cols=559 Identities=45% Similarity=0.746 Sum_probs=491.0
Q ss_pred CCCCCCCccCcEEEEEEcCCceecc-CCCCccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEE
Q psy4209 1 MAKLEPYNTHGTIHIIINNQVGFTA-NPWETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFID 79 (856)
Q Consensus 1 ls~l~~y~~gGvIfvveNNqyg~sT-~~~~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe 79 (856)
|+.+.+|.|||+||||+|||||||| ++.+++++.+++++|++||+|+++|||||++||++|+++|++++|++++|+|||
T Consensus 372 ~A~~~~lp~gg~I~vv~nN~~~ist~~~~~~~~~~~~~~~a~a~g~p~~~VdG~D~~av~~a~~~A~e~~r~~~~P~lIe 451 (933)
T 2jgd_A 372 MSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFID 451 (933)
T ss_dssp HTTSTTTCCSCCEEEEEECC---------------CGGGGGGTTTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred HhhccCCCCCceEEEEEeCCccccCCCHHhcccchhHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 3568899999999999999999999 899888889999999999999999999999999999999999999999999999
Q ss_pred EeeecCCCCCCCCCCCCCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q psy4209 80 IIGYRRHGHNEGDDPSFTQPLMYEKIKQTKPLFEKYTQKLLQEKVITEDMVTLEVQAYQQKLESEYEKSKEATRFDSAPW 159 (856)
Q Consensus 80 ~~tYR~~GHse~D~~~yr~~~e~~~~~~~dpi~~~~~~~Li~~G~~teeel~~i~~~~~~~v~~a~~~A~~~~~p~~~~~ 159 (856)
++|||++|||++|++.||+|+|++.|+++++++.+|+++|+++|++|++++++++++++++|++++++|++.. |.+..
T Consensus 452 ~~tyR~~GH~~~D~~~yr~~~e~~~~~~~~dPi~~~~~~Li~~Gv~t~~~~~~i~~~~~~~v~~a~~~A~~~~-p~~~~- 529 (933)
T 2jgd_A 452 LVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWR-PMNMH- 529 (933)
T ss_dssp EECCCCC-----------CCTTHHHHHTSCCHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHTSCCCTTEE-CCCGG-
T ss_pred EeeeeecCcCcccchhhCCHHHHHHHHccCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCcc-
Confidence 9999999999999999999999999999755559999999999999999999999999999999999998742 22211
Q ss_pred CcCCcCCCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHhhh-cchhhHHHHHHHHhhhhc
Q psy4209 160 IDVPWEGFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRVLNQRRKMIEE-NSLDWAMAEALALGTLLD 238 (856)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~l~~r~~~~~~-~~idw~~aE~la~~sll~ 238 (856)
...|.++.... ....++|+++.+.|+.+++++..+| ++|++|+++.++++.|.+|+++ ..+||+++|++||++|+.
T Consensus 530 -~~~~~~~~~~~-~~~~~~tg~~~~~l~~i~~~~~~~p-~~~~~~~~v~~~~~~R~~~~~~~~~~dw~~~e~~al~~l~~ 606 (933)
T 2jgd_A 530 -SFTWSPYLNHE-WDEEYPNKVEMKRLQELAKRISTVP-EAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVD 606 (933)
T ss_dssp -GCTTGGGSSCC-TTCCCCCCCCHHHHHHHHHHTTCCC-TTSCCCHHHHHHHHHHHHHHTTSSCBCHHHHHHHHHHHHHT
T ss_pred -hhhcccccccc-cccCCCCCCCHHHHHHHHhhhcCCC-CCCcccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHh
Confidence 13566543211 1124679999999999999999999 9999999999999999999877 689999999999999999
Q ss_pred cCCeEEEeeccCCCCcccccceeeeecCCCCEeecCcccccccCCcEEEccCcchHHHHHHHhhhccCCCCcceeecccc
Q psy4209 239 SGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYTPLHHIGAEAGKFHVYNSILNEMAALSFEYGYSLVDPNFLVIWEAQF 318 (856)
Q Consensus 239 eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L~~~~g~~rV~nspLsE~~i~G~~~G~a~~g~~~l~~wE~qf 318 (856)
+|.+|+++|||+++|||||||||||||++||+|.+|++|.++||++||+||||||++++||++|||+.|+++|+|||+||
T Consensus 607 ~~~~V~~~g~Dv~~gTfs~rh~v~~d~~~g~~~~~l~~l~~~~gp~rv~ds~IaE~~~vg~a~G~A~~G~~~lpv~e~qf 686 (933)
T 2jgd_A 607 EGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQF 686 (933)
T ss_dssp TTCCEEEEETTTTTCTTSCCCCSEECSSSSCEECGGGCSCTTCCCEEEECCCSCHHHHHHHHHHHHHHCTTSEEEEEC-C
T ss_pred cCCCEEEECCccCCcchhhhhhhcccccCCceeechHHHHHHcCCCeEEECCcCHHHHHHHHHHHHhcCCCCCCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCccCCCCCccCCCCchhhhhhhcCCCCcchhhhhhhhcCCCCeEEEec
Q psy4209 319 GDFANNAQAVFDQWISSARSKWNIDSGLVLLLPHGIEGQGPEHSSARPERFLELCSDSPRCVELDMKKQLFDANWFVLYP 398 (856)
Q Consensus 319 gDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~G~~g~Gp~HSsar~Er~lql~~e~~~~~~~~~~~~~~~~gl~V~~p 398 (856)
|||+|+||..+||++++++.||++++||||++||||+|+||+|||+|+|||||||+. |||+|++|
T Consensus 687 ~dF~~~AQra~DQii~~~~ak~~~~~~vv~~l~~G~~g~G~~Hss~~~E~~l~~~~~---------------pnm~V~~P 751 (933)
T 2jgd_A 687 GDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAE---------------QNMQVCVP 751 (933)
T ss_dssp GGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSSSCTTSSCCCHHHHHHTCCT---------------TCCEEECC
T ss_pred hhhhcccHHHHHHHHHHHHHHHccCCCEEEEEeCCCCCCCcccccchHHHHHHHhCC---------------CCeEEEec
Confidence 999999999999999999999999999999999999999999999999999999998 99999999
Q ss_pred CCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCccccCCCcccccCCCCceEEEEcCCcHHHHHH
Q psy4209 399 STPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKFRAYLPDTMADRNKDKVEKYILCSGKIYYDLI 478 (856)
Q Consensus 399 stpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f~~~i~~a~~~~~~~~v~tvv~~~g~v~~~l~ 478 (856)
|||+|+|||||+|+.+.+++||+|++||+|||++.+.++++++ +++.|..+||++.+.+ +++|++||+|+|++|++|+
T Consensus 752 st~~e~~~lLr~a~~~~~~~Pvii~~pk~l~r~~~~~~~~~~~-~~~~f~~~ig~~~~~~-g~dV~~vI~~~G~v~~~l~ 829 (933)
T 2jgd_A 752 STPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEEL-ANGTFLPAIGEIDELD-PKGVKRVVMCSGKVYYDLL 829 (933)
T ss_dssp CSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCTTCCBCHHHH-HHCCCCSEECCCSCCC-GGGCCEEEEECTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEecchhccCCCCcCCcccc-CCCceeecCCcceEee-cCcceEEEEEchHHHHHHH
Confidence 9999999999999765568999999999999999888877777 6678999999998644 8889669999999999999
Q ss_pred HHHHHcCCCCcEEEEEecccCCCCHHHHHHHHhcCCCCceEEEEecCCCCCCcHHHHHHHHHHhhhhCCCCeEEecCCCC
Q psy4209 479 EARDAANLTEQIAIARLEQISPFPYRAFINDVSSYKNVKQVCWCQSEPENFGFWKYVQARMCSVMEITTDPVCYIGRDPS 558 (856)
Q Consensus 479 ~a~~~~~~~~~vevi~l~~L~P~~~~~i~~sv~kt~~~~~~v~vqEe~~~~G~~~~i~~~i~~~~~~~~~~~~~vgr~~~ 558 (856)
+++++.+. .+++|||+|||+|||.++|.++++||++++++|||||+++|+|+|++|+++|.+.+.. ..+++|+|||++
T Consensus 830 aa~~~l~~-~~v~VIdl~~l~Pld~e~i~~~~~k~~~~~~vv~veE~~~~gG~g~~v~~~l~~~~~~-~~~v~~vg~~d~ 907 (933)
T 2jgd_A 830 EQRRKNNQ-HDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPF-GASLRYAGRPAS 907 (933)
T ss_dssp HHHHHTTC-CSEEEEEECEEESCCHHHHHHHHGGGTTCCEEEEEEEEETTSTTHHHHHHHHHTTSCT-TCEEEEEEECCC
T ss_pred HHHHHccc-CCeEEEEeeccCCCCHHHHHHHHHhCCCCceEEEEecCCCcCCHHHHHHHHHHHhccc-CCceEEEecCCc
Confidence 99765554 4999999999999999999999999998877999999999999999999999987642 357999999999
Q ss_pred CCCCCCchhhHHHHHHHchHHhhhcc
Q psy4209 559 SVPASGLQAKHYLLAALNMEKKAFKV 584 (856)
Q Consensus 559 ~~pa~g~~~~h~~e~~~i~~~~a~~~ 584 (856)
++||+|+...|.+|+++| |++||+.
T Consensus 908 ~~pa~g~~~~h~~~~~~i-~~~a~~~ 932 (933)
T 2jgd_A 908 ASPAVGHMSVHQKQQQDL-VNDALNV 932 (933)
T ss_dssp SSSSCSCHHHHHHHHHHH-HHHHHCC
T ss_pred CCCCcCCHHHHHHHHHHH-HHHHhcc
Confidence 999999999999999999 9999974
No 4
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=100.00 E-value=1.1e-45 Score=408.39 Aligned_cols=317 Identities=16% Similarity=0.181 Sum_probs=278.8
Q ss_pred chhhHHHHHHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCEeecCcccccccCCcEEEccCcchHHHHHHHh
Q psy4209 222 SLDWAMAEALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYTPLHHIGAEAGKFHVYNSILNEMAALSFEY 301 (856)
Q Consensus 222 ~idw~~aE~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L~~~~g~~rV~nspLsE~~i~G~~~ 301 (856)
.++|..+...++..++.++.+|+++|+|+++ +||+|+++++|.++||+.|++|++|||.+++|+++
T Consensus 4 ~~~~~~a~~~~l~~l~~~~~~vv~~~~D~~~--------------~~g~~~~~~~~~~~~gp~r~~~~gisE~~~~~~a~ 69 (338)
T 1qs0_B 4 TMTMIQALRSAMDVMLERDDNVVVYGQDVGY--------------FGGVFRCTEGLQTKYGKSRVFDAPISESGIVGTAV 69 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHCTTEEEEETTCSS--------------SCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhhCCCEEEECCcccc--------------cCCcchhHHHHHHHhCCCcEEEccccHHHHHHHHH
Confidence 3578888889999999999999999999987 89999999999999999999999999999999999
Q ss_pred hhccCCCCcceeecccchhhHHhHHHHHHHHHHhhhhhcCC--ccCeEEEcCccCCCCCccCCCCchhhhhhhcCCCCcc
Q psy4209 302 GYSLVDPNFLVIWEAQFGDFANNAQAVFDQWISSARSKWNI--DSGLVLLLPHGIEGQGPEHSSARPERFLELCSDSPRC 379 (856)
Q Consensus 302 G~a~~g~~~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~--~~~lv~~lP~G~~g~Gp~HSsar~Er~lql~~e~~~~ 379 (856)
|+|+.|.||++ ++||++|++.|.+||.+.++..++++|+ ++|+|+++|||+.+.||.|++...++||
T Consensus 70 G~A~~G~rp~~--~~t~~~F~~~a~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g~~~G~th~s~~d~~~l--------- 138 (338)
T 1qs0_B 70 GMGAYGLRPVV--EIQFADYFYPASDQIVSEMARLRYRSAGEFIAPLTLRMPCGGGIYGGQTHSQSPEAMF--------- 138 (338)
T ss_dssp HHHHHTCEEEE--ECSCGGGCGGGHHHHHTTTTTHHHHTTTSSCCCCEEEEEECCSSSCCSSSSCCCHHHH---------
T ss_pred HHHhCCCEEEE--EeccHhHHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEEeCCCCCCCcccccccHHHHH---------
Confidence 99999999988 9999999999999998878888889887 6899999999998888988886666555
Q ss_pred hhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCC---CCccc--------ccccCCCcc
Q psy4209 380 VELDMKKQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQV---RSTFE--------DLSLDTKFR 448 (856)
Q Consensus 380 ~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~---~s~~~--------e~~~~~~f~ 448 (856)
.++|||+|+.|+||++++++|+.+++. ++|++|++||.|+|.+.. .++.. ++ +++.|.
T Consensus 139 --------~~iP~l~V~~Psd~~e~~~~l~~A~~~--~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 207 (338)
T 1qs0_B 139 --------TQVCGLRTVMPSNPYDAKGLLIASIEC--DDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAV-PDGYYT 207 (338)
T ss_dssp --------TTSTTCEEECCCSHHHHHHHHHHHHHS--SSCEEEEEEGGGSSSCCCSCSSSCCCCSTTSTTCEE-ESSCCC
T ss_pred --------hcCCCCEEEeeCCHHHHHHHHHHHHhc--CCcEEEEEchHhhcCcccccccCccchhhccccccc-CCCCcc
Confidence 578999999999999999999999964 899999999999997543 22222 34 556788
Q ss_pred ccCCCcccccCCCCceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHHHHHHHhcCCCCceEEEEecCCCC
Q psy4209 449 AYLPDTMADRNKDKVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRAFINDVSSYKNVKQVCWCQSEPEN 528 (856)
Q Consensus 449 ~~i~~a~~~~~~~~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~i~~sv~kt~~~~~~v~vqEe~~~ 528 (856)
.++|++.+.+++.|+ +||+||.+++.+++++++ +| ++++|||+++|+|||.++|.++++||++ +|||+|...+
T Consensus 208 ~~~gk~~~~~~g~dv-~iva~G~~~~~a~~Aa~~-~G--i~v~vi~~~~l~P~d~~~i~~~~~~~~~---vvvvEe~~~~ 280 (338)
T 1qs0_B 208 VPLDKAAITRPGNDV-SVLTYGTTVYVAQVAAEE-SG--VDAEVIDLRSLWPLDLDTIVESVKKTGR---CVVVHEATRT 280 (338)
T ss_dssp CCTTCCCEEECCSSC-EEEECTTHHHHHHHHHHH-HC--CCCEEEECSEEESCCHHHHHHHHHHHSC---EEEEESSCST
T ss_pred cccCceeEecCCCCE-EEEEeCHHHHHHHHHHHH-cC--CCEEEEeecccCCCCHHHHHHHHhcCCE---EEEEecCCcC
Confidence 889998866677888 999999999999999887 45 8999999999999999999999999998 9999999889
Q ss_pred CCcHHHHHHHHHHhhh-hCCCCeEEecCCCCCCCCCCchhhHHHHHHHchHHhhhc
Q psy4209 529 FGFWKYVQARMCSVME-ITTDPVCYIGRDPSSVPASGLQAKHYLLAALNMEKKAFK 583 (856)
Q Consensus 529 ~G~~~~i~~~i~~~~~-~~~~~~~~vgr~~~~~pa~g~~~~h~~e~~~i~~~~a~~ 583 (856)
+|+|++|++.+.+... .+..++.++|.++.+.|.. +...+....+.| ++.+.+
T Consensus 281 gG~g~~V~~~l~~~~~~~l~~~v~~ig~~d~~~~~~-l~~~~g~~~~~I-~~~i~~ 334 (338)
T 1qs0_B 281 CGFGAELVSLVQEHCFHHLEAPIERVTGWDTPYPHA-QEWAYFPGPSRV-GAALKK 334 (338)
T ss_dssp TSTHHHHHHHHHHHSSSSCCSCCEEEECCSSCCCST-THHHHSCCHHHH-HHHHHH
T ss_pred CcHHHHHHHHHHHhcccccCCCeEEEecCCcCCcHH-HHHHHCCCHHHH-HHHHHH
Confidence 9999999999988753 2456899999999888876 888888888888 777654
No 5
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=100.00 E-value=6.9e-46 Score=410.29 Aligned_cols=296 Identities=13% Similarity=0.126 Sum_probs=261.1
Q ss_pred chhhHHHHHHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCEeecCcccccccCCcEEEccCcchHHHHHHHh
Q psy4209 222 SLDWAMAEALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYTPLHHIGAEAGKFHVYNSILNEMAALSFEY 301 (856)
Q Consensus 222 ~idw~~aE~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L~~~~g~~rV~nspLsE~~i~G~~~ 301 (856)
..+|+++|+| .+++.++.+|+++|+|+++ +||+|++|++|.++||+.|++|++|||.+++|+++
T Consensus 16 ~~~~a~~~~L--~~l~~~~~~vv~~~~D~~~--------------~g~~~~~~~~~~~~~gp~r~~d~gIaE~~~v~~a~ 79 (341)
T 2ozl_B 16 TVRDAINQGM--DEELERDEKVFLLGEEVAQ--------------YDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAV 79 (341)
T ss_dssp EHHHHHHHHH--HHHHHHCTTEEEEETTSST--------------TCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHH
T ss_pred cHHHHHHHHH--HHHHhhCCCEEEECCcccc--------------cCCcchhHHHHHHHhCCCcEEECchhHHHHHHHHH
Confidence 4688999988 5999999999999999988 88999999999999999999999999999999999
Q ss_pred hhccCCCCcceeecccchhhHHhHHHHHHHHHHhhhhhcCC--ccCeEEEcCccCC-CCCccCCCCchhhhhhhcCCCCc
Q psy4209 302 GYSLVDPNFLVIWEAQFGDFANNAQAVFDQWISSARSKWNI--DSGLVLLLPHGIE-GQGPEHSSARPERFLELCSDSPR 378 (856)
Q Consensus 302 G~a~~g~~~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~--~~~lv~~lP~G~~-g~Gp~HSsar~Er~lql~~e~~~ 378 (856)
|+|+.|.+|++ ++||++|+..|.+||.+.+++.+||+|+ ++|+|+++|||+. +.||+||+ ++|++|
T Consensus 80 G~A~~G~rp~~--~~~f~~F~~~a~dqi~~~~a~~~y~~~g~~~~pvv~~~~~G~~g~~G~tHs~-~~ea~l-------- 148 (341)
T 2ozl_B 80 GAAMAGLRPIC--EFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQ-CFAAWY-------- 148 (341)
T ss_dssp HHHHTTCEEEE--ECSSGGGGGGGHHHHHTTTTTHHHHTTSSCCCCCEEEEECSCCSSCCGGGCC-CCHHHH--------
T ss_pred HHHHCCCEEEE--EeccHHHHHHHHHHHHHHHHHHHhhccccCCCCEEEEEcCcCCCCCCcchhh-HHHHHh--------
Confidence 99999999988 9999999999999999888888999995 6899999999885 48999987 467554
Q ss_pred chhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCccccCCCccccc
Q psy4209 379 CVELDMKKQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKFRAYLPDTMADR 458 (856)
Q Consensus 379 ~~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f~~~i~~a~~~~ 458 (856)
.++|||+|++|+||++++++|+++++. ++|++|++||.||+++...++ ++ +++.|..++|++.+.+
T Consensus 149 ---------~~iP~l~V~~Psd~~e~~~~l~~a~~~--~~Pv~i~~~~~~~~~~~~v~p--~~-~~~~~~~~~Gk~~v~~ 214 (341)
T 2ozl_B 149 ---------GHCPGLKVVSPWNSEDAKGLIKSAIRD--NNPVVVLENELMYGVPFEFPP--EA-QSKDFLIPIGKAKIER 214 (341)
T ss_dssp ---------HTSTTCEEECCCSHHHHHHHHHHHHHS--SSCEEEEECHHHHTCEEECCH--HH-HSTTCCCCTTCCEEEE
T ss_pred ---------ccCCCCEEEEeCCHHHHHHHHHHHHhc--CCCEEEEEChhhhcCCCCcCC--cc-CCccccccCCceEEec
Confidence 678999999999999999999999965 899999999999987654421 23 4566778899988767
Q ss_pred CCCCceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHHHHHHHhcCCCCceEEEEecCCCCCCcHHHHHHH
Q psy4209 459 NKDKVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRAFINDVSSYKNVKQVCWCQSEPENFGFWKYVQAR 538 (856)
Q Consensus 459 ~~~~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~i~~sv~kt~~~~~~v~vqEe~~~~G~~~~i~~~ 538 (856)
++.|+ +||+||.+++.++++++++...|++++||++++|+|||.++|.++++++++ +|||+|...++|+|++|++.
T Consensus 215 ~g~dv-~iia~Gs~~~~a~~Aa~~L~~~Gi~v~vv~~~~l~P~d~~~i~~~~~~~~~---vv~vEe~~~~Gg~g~~v~~~ 290 (341)
T 2ozl_B 215 QGTHI-TVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNH---LVTVEGGWPQFGVGAEICAR 290 (341)
T ss_dssp CCSSE-EEEECSTHHHHHHHHHHHHHTTTCCEEEEECCEEETCCHHHHHHHHHHHSC---EEEECSSCSTTCHHHHHHHH
T ss_pred cCCCE-EEEEeCHHHHHHHHHHHHHHhcCCCeEEEeeeeecCCCHHHHHHHHhcCCe---EEEEecCcccCcHHHHHHHH
Confidence 77788 999999999999999987765569999999999999999999999999988 99998888889999999999
Q ss_pred HHH-hhh-hCCCCeEEecCCCCCCCC
Q psy4209 539 MCS-VME-ITTDPVCYIGRDPSSVPA 562 (856)
Q Consensus 539 i~~-~~~-~~~~~~~~vgr~~~~~pa 562 (856)
+.+ ... .+..|++++|.|+.+.|.
T Consensus 291 l~~~~~~~~l~~~v~~ig~~d~~~~~ 316 (341)
T 2ozl_B 291 IMEGPAFNFLDAPAVRVTGADVPMPY 316 (341)
T ss_dssp HHHSTTGGGCSSCCEEECCCSSCCCS
T ss_pred HHhhhcccccCCCEEEEecCCcCCCC
Confidence 998 653 356789999999877663
No 6
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=100.00 E-value=1.4e-45 Score=405.32 Aligned_cols=313 Identities=19% Similarity=0.211 Sum_probs=274.2
Q ss_pred chhhHHHHHHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCEeecCcccccccCCcEEEccCcchHHHHHHHh
Q psy4209 222 SLDWAMAEALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYTPLHHIGAEAGKFHVYNSILNEMAALSFEY 301 (856)
Q Consensus 222 ~idw~~aE~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L~~~~g~~rV~nspLsE~~i~G~~~ 301 (856)
.++|..|...++..|+.++.+|+++|+|+++ +||+|+.+++|.++||+.|++|++|+|.+++|+++
T Consensus 3 ~~~~~~a~~~~l~~l~~~~~~vv~~~~D~~~--------------~~g~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~ 68 (324)
T 1umd_B 3 LMTMVQALNRALDEEMAKDPRVVVLGEDVGK--------------RGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAAL 68 (324)
T ss_dssp EECHHHHHHHHHHHHHHHCTTEEEEETTCST--------------TCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhcCCCEEEECCcccc--------------cCCcchhhHHHHHHhCCCcEEECchhHHHHHHHHH
Confidence 4689999999999999999999999999988 89999999999999999999999999999999999
Q ss_pred hhccCCCCcceeecccchhhHHhHHHHHHHHHHhhhhhcCC--ccCeEEEcCccCCCC-CccCCCCchhhhhhhcCCCCc
Q psy4209 302 GYSLVDPNFLVIWEAQFGDFANNAQAVFDQWISSARSKWNI--DSGLVLLLPHGIEGQ-GPEHSSARPERFLELCSDSPR 378 (856)
Q Consensus 302 G~a~~g~~~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~--~~~lv~~lP~G~~g~-Gp~HSsar~Er~lql~~e~~~ 378 (856)
|+|+.|.+|++ ++||++|++.|.+||.+.++..+|++|+ ++|+|+++|+|+.|. |++||+ ..++||
T Consensus 69 G~A~~G~~p~~--~~t~~~F~~~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~g~~~~~g~~hs~-~~~a~~-------- 137 (324)
T 1umd_B 69 GMAAHGLRPVA--EIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQ-SPEAHF-------- 137 (324)
T ss_dssp HHHHHTCEEEE--ECSSGGGCGGGHHHHHHTTTTHHHHTTTSSCCCCEEEEEECSSSSCGGGSSC-CCHHHH--------
T ss_pred HHHHCCCEEEE--EeccHhHHHHHHHHHHHHHHHHHhhcCCCCcCCEEEEEcCCCCCCCCCccch-hHHHHH--------
Confidence 99999999998 9999999999999998888888899884 689999999988554 566666 445554
Q ss_pred chhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCccccCCCccccc
Q psy4209 379 CVELDMKKQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKFRAYLPDTMADR 458 (856)
Q Consensus 379 ~~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f~~~i~~a~~~~ 458 (856)
.++|||+|+.|+||.+++++|+.+++ +++|++|++||.|+|.+. .++ +++.|..++|++.+.+
T Consensus 138 ---------~~iP~~~V~~P~d~~e~~~~l~~a~~--~~~Pv~i~~p~~l~~~~~-----~~~-~~~~~~~~~Gk~~~~~ 200 (324)
T 1umd_B 138 ---------VHTAGLKVVAVSTPYDAKGLLKAAIR--DEDPVVFLEPKRLYRSVK-----EEV-PEEDYTLPIGKAALRR 200 (324)
T ss_dssp ---------HTSTTCEEEECCSHHHHHHHHHHHHH--CSSCEEEEEEGGGSSSCC-----EEC-CSSCCCCCTTCCEEEE
T ss_pred ---------hcCCCCEEEEeCCHHHHHHHHHHHHh--cCCCEEEEechHhcCCCC-----CCc-CCCCccccCCcceEEe
Confidence 67899999999999999999999995 589999999999998743 244 6667888999988666
Q ss_pred CCCCceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHHHHHHHhcCCCCceEEEEecCCCCCCcHHHHHHH
Q psy4209 459 NKDKVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRAFINDVSSYKNVKQVCWCQSEPENFGFWKYVQAR 538 (856)
Q Consensus 459 ~~~~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~i~~sv~kt~~~~~~v~vqEe~~~~G~~~~i~~~ 538 (856)
++.|+ +||+||.+++.++++++++...|++++|||+++|+|||.++|.++++||++ +|||+|.+.++|+|++|++.
T Consensus 201 ~g~dv-~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~---vv~vEe~~~~gG~g~~v~~~ 276 (324)
T 1umd_B 201 EGKDL-TLICYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGR---VVLVSDAPRHASFVSEVAAT 276 (324)
T ss_dssp CCSSE-EEEECGGGHHHHHHHHHHHHHTTCCEEEEECCEEETCCHHHHHHHHHHHSC---EEEEEEEESTTCHHHHHHHH
T ss_pred cCCCE-EEEEecHHHHHHHHHHHHHHhcCCCEEEEEeceecCCCHHHHHHHHhcCCe---EEEEecCCcCCCHHHHHHHH
Confidence 77787 999999999999999987654459999999999999999999999999998 99999999999999999999
Q ss_pred HHHhhh-hCCCCeEEecCCCCCCCCCCchhhHHHHHHHchHHhhh
Q psy4209 539 MCSVME-ITTDPVCYIGRDPSSVPASGLQAKHYLLAALNMEKKAF 582 (856)
Q Consensus 539 i~~~~~-~~~~~~~~vgr~~~~~pa~g~~~~h~~e~~~i~~~~a~ 582 (856)
+.+... .++.|+.++|.++.+.|.. +...+....+.| ++.+.
T Consensus 277 l~~~~~~~l~~~v~~vg~~d~~~~~~-l~~~~g~~~~~I-~~~i~ 319 (324)
T 1umd_B 277 IAEDLLDMLLAPPIRVTGFDTPYPYA-QDKLYLPTVTRI-LNAAK 319 (324)
T ss_dssp HHHHHGGGCSSCCEEEEECSSCCCST-THHHHSCCHHHH-HHHHH
T ss_pred HHHhCccccCCCeEEEeCCCCCCCHH-HHHHhCcCHHHH-HHHHH
Confidence 998763 3567899999998877755 777676777777 66554
No 7
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=100.00 E-value=3.4e-45 Score=405.07 Aligned_cols=315 Identities=17% Similarity=0.146 Sum_probs=274.2
Q ss_pred cchhhHHHHHHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCEeecCcccccccCCcEEEccCcchHHHHHHH
Q psy4209 221 NSLDWAMAEALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYTPLHHIGAEAGKFHVYNSILNEMAALSFE 300 (856)
Q Consensus 221 ~~idw~~aE~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L~~~~g~~rV~nspLsE~~i~G~~ 300 (856)
..++|..|...|+..++.++.+|+++|+|++. ||+|+.+++|.++||+.|++|++|||.+++|++
T Consensus 19 ~~~~~~~a~~~aL~~l~~~~~~vv~~~~D~~~---------------~gt~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a 83 (342)
T 2bfd_B 19 QKMNLFQSVTSALDNSLAKDPTAVIFGEDVAF---------------GGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFG 83 (342)
T ss_dssp EEECHHHHHHHHHHHHHHHCTTCEEEETTTTT---------------TCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHhcCCCEEEEcCccCC---------------CcccchHHHHHHHhCCCeEEEcCcCHHHHHHHH
Confidence 45789999999999999999999999999975 577889999999999999999999999999999
Q ss_pred hhhccCCCCcceeecccchhhHHhHHHHHHHHHHhhhhhcCCcc---CeEEEcCccCCCCCccCCCCchhhhhhhcCCCC
Q psy4209 301 YGYSLVDPNFLVIWEAQFGDFANNAQAVFDQWISSARSKWNIDS---GLVLLLPHGIEGQGPEHSSARPERFLELCSDSP 377 (856)
Q Consensus 301 ~G~a~~g~~~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~---~lv~~lP~G~~g~Gp~HSsar~Er~lql~~e~~ 377 (856)
+|+|+.|.+|++ |+||++|+..|++||.+.++..+++++++. |+|+++|||+.+.||.|++...++||
T Consensus 84 ~G~A~~G~rp~~--~~tf~~F~~~a~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g~~~G~th~~~~d~~~l------- 154 (342)
T 2bfd_B 84 IGIAVTGATAIA--EIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFF------- 154 (342)
T ss_dssp HHHHHTTCCEEE--ECSSGGGCGGGHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESCCSSCGGGSSCCCHHHH-------
T ss_pred HHHHHCCCeeEE--EecchhHHHHHHHHHHHHHHHHHhhhcCCccCCCEEEEEecCCCCCCcchhhHhHHHHH-------
Confidence 999999999988 999999999999999888888888888765 99999999887788988886666555
Q ss_pred cchhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCccccCCCcccc
Q psy4209 378 RCVELDMKKQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKFRAYLPDTMAD 457 (856)
Q Consensus 378 ~~~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f~~~i~~a~~~ 457 (856)
.++|||+|+.|+||++++++|+.++.. ++|++|++||.|+|.+.. ++ +.+.|..++|++.+.
T Consensus 155 ----------~~iP~l~V~~Psd~~e~~~~l~~a~~~--~~Pv~i~~p~~l~r~~~~-----~~-~~~~~~~~~G~~~v~ 216 (342)
T 2bfd_B 155 ----------AHCPGIKVVIPRSPFQAKGLLLSCIED--KNPCIFFEPKILYRAAAE-----EV-PIEPYNIPLSQAEVI 216 (342)
T ss_dssp ----------HTSTTCEEECCSSHHHHHHHHHHHHHS--SSCEEEEEEGGGTTSCCE-----EE-ESSCCCCCSSCCEEE
T ss_pred ----------hcCCCcEEEeeCCHHHHHHHHHHHHhc--CCcEEEEecchhcCCCCC-----CC-CCcccceeCCceEEe
Confidence 678999999999999999999999964 899999999999988542 33 455677789998776
Q ss_pred cCCCCceEEEEcCCcHHHHHHHHHHHcCC-CCcEEEEEecccCCCCHHHHHHHHhcCCCCceEEEEecCCCCCCcHHHHH
Q psy4209 458 RNKDKVEKYILCSGKIYYDLIEARDAANL-TEQIAIARLEQISPFPYRAFINDVSSYKNVKQVCWCQSEPENFGFWKYVQ 536 (856)
Q Consensus 458 ~~~~~v~tvv~~~g~v~~~l~~a~~~~~~-~~~vevi~l~~L~P~~~~~i~~sv~kt~~~~~~v~vqEe~~~~G~~~~i~ 536 (856)
+++.|+ +||+||.+++.++++++++... |++++|||+++|+|||.++|.++++||++ +|||+|...++|+|++|+
T Consensus 217 ~~g~dv-~iia~G~~~~~a~~Aa~~L~~~~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~---vv~vEe~~~~gg~g~~v~ 292 (342)
T 2bfd_B 217 QEGSDV-TLVAWGTQVHVIREVASMAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGR---LLISHEAPLTGGFASEIS 292 (342)
T ss_dssp ECCSSE-EEEECTTHHHHHHHHHHHHHHHHCCCEEEEECCEEESCCHHHHHHHHHHHSC---EEEEEEEESTTCHHHHHH
T ss_pred ccCCCE-EEEEECHHHHHHHHHHHHHHhhcCCCEEEEeeeecCCCCHHHHHHHHhcCCE---EEEEEeCccCCcHHHHHH
Confidence 777888 9999999999999999876433 49999999999999999999999999998 999998888999999999
Q ss_pred HHHHHhhh-hCCCCeEEecCCCCCCCCCCchhhHHHHHHHchHHhhhc
Q psy4209 537 ARMCSVME-ITTDPVCYIGRDPSSVPASGLQAKHYLLAALNMEKKAFK 583 (856)
Q Consensus 537 ~~i~~~~~-~~~~~~~~vgr~~~~~pa~g~~~~h~~e~~~i~~~~a~~ 583 (856)
+.+.+... .+..|+.++|.++...|.. +...+....+.| ++.+.+
T Consensus 293 ~~l~~~~~~~l~~~v~~vg~~d~~~~~~-l~~~~gl~~~~I-~~~i~~ 338 (342)
T 2bfd_B 293 STVQEECFLNLEAPISRVCGYDTPFPHI-FEPFYIPDKWKC-YDALRK 338 (342)
T ss_dssp HHHHHHHGGGCSSCCEEEEECSSCCCST-THHHHSCCHHHH-HHHHHH
T ss_pred HHHHhhCccccCCCeEEEecCCCCChHH-HHHHHCcCHHHH-HHHHHH
Confidence 99988753 3557899999998777755 777777777777 665543
No 8
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=100.00 E-value=5.6e-45 Score=406.80 Aligned_cols=312 Identities=21% Similarity=0.254 Sum_probs=239.6
Q ss_pred chhhHHHHHHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCEeecCcccccccCCcEEEccCcchHHHHHHHh
Q psy4209 222 SLDWAMAEALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYTPLHHIGAEAGKFHVYNSILNEMAALSFEY 301 (856)
Q Consensus 222 ~idw~~aE~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L~~~~g~~rV~nspLsE~~i~G~~~ 301 (856)
.++|..+...++..++.++.+|+++|+|+++ +||+|+++++|.++||+.|++|++|||.+++|+++
T Consensus 50 ~~~~~~a~~~aL~~l~~~d~~vv~~~~D~~~--------------~~g~~~~~~~~~~~~gp~r~~d~gIaE~~~v~~a~ 115 (369)
T 1ik6_A 50 MANMAKAINMALHEEMERDERVVVLGEDVGK--------------KGGVFLVTEGLYERFGPERVIDTPLNEGGILGFAM 115 (369)
T ss_dssp EECHHHHHHHHHHHHHHHCTTEEEEEC-----------------------CTTTTHHHHHCTTTEEECCSCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHccCCCEEEECCcccc--------------cCCcchhHHHHHHHhCCCcEEECcccHHHHHHHHH
Confidence 4678888888999999999999999999988 89999999999999999999999999999999999
Q ss_pred hhccCCCCcceeecccchhhHHhHHHHHHHHHHhhhhhcCC--ccCeEEEcCccC-CCCCccCCCCchhhhhhhcCCCCc
Q psy4209 302 GYSLVDPNFLVIWEAQFGDFANNAQAVFDQWISSARSKWNI--DSGLVLLLPHGI-EGQGPEHSSARPERFLELCSDSPR 378 (856)
Q Consensus 302 G~a~~g~~~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~--~~~lv~~lP~G~-~g~Gp~HSsar~Er~lql~~e~~~ 378 (856)
|+|+.|.+|++ |+||++|+..|.+||.+.++..++++|+ ++|+|+++|||+ .|.|+.||+ +.++||
T Consensus 116 G~A~~G~rpv~--~~tf~~Fl~~a~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg~~g~g~~hs~-~~~a~l-------- 184 (369)
T 1ik6_A 116 GMAMAGLKPVA--EIQFVDFIWLGADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTRGGLYHSN-SPEAIF-------- 184 (369)
T ss_dssp HHHHTTCEEEE--ECCCC----CCHHHHHHHHHHHHC------CCCCEEEEEECC------------HHHHH--------
T ss_pred HHHHCCCeeEE--EecchhHHHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCCCCCCccccc-cHHHHH--------
Confidence 99999999888 9999999999999999988888899998 799999999988 454555665 456655
Q ss_pred chhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCccccCCCccccc
Q psy4209 379 CVELDMKKQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKFRAYLPDTMADR 458 (856)
Q Consensus 379 ~~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f~~~i~~a~~~~ 458 (856)
.++|||+|++|+||+++++||+++++ +++||+|++||.|+|.+. .++ +++.|..++|++.+.+
T Consensus 185 ---------~~iPnl~V~~Psd~~e~~~ll~~A~~--~~~Pv~i~~p~~l~r~~~-----~~v-~~~~~~~~~G~~~v~~ 247 (369)
T 1ik6_A 185 ---------VHTPGLVVVMPSTPYNAKGLLKAAIR--GDDPVVFLEPKILYRAPR-----EEV-PEGDYVVEIGKARVAR 247 (369)
T ss_dssp ---------HTCTTCEEECCCSHHHHHHHHHHHHH--SSSCEEEEEEGGGSSCCC-----EEE-ECSSCCCCTTCCEEEE
T ss_pred ---------cCCCCcEEEecCCHHHHHHHHHHHHh--CCCCEEEEEehhhhccCC-----CCc-CCCcccccCCceEEEE
Confidence 57899999999999999999999996 589999999999998742 144 5566778899988767
Q ss_pred CCCCceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHHHHHHHhcCCCCceEEEEecCCCCCCcHHHHHHH
Q psy4209 459 NKDKVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRAFINDVSSYKNVKQVCWCQSEPENFGFWKYVQAR 538 (856)
Q Consensus 459 ~~~~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~i~~sv~kt~~~~~~v~vqEe~~~~G~~~~i~~~ 538 (856)
++.|+ +||++|.+++.++++++++. | +++|||+++|+|||.++|.++++||++ +|||+|....+|++++|++.
T Consensus 248 ~g~dv-~Iia~G~~v~~a~~Aa~~L~--G-~v~Vi~~~~l~P~d~~~i~~~~~~~~~---vvvvEe~~~~GG~g~~v~~~ 320 (369)
T 1ik6_A 248 EGDDV-TLVTYGAVVHKALEAAERVK--A-SVEVVDLQTLNPLDFDTVLKSVSKTGR---LIIAHDSPKTGGLGAEVRAL 320 (369)
T ss_dssp CCSSE-EEEECTTHHHHHHHHHHTSS--S-CEEEEECCEEETTCHHHHHHHHHHHCC---EEEEEEEESTTSHHHHHHHH
T ss_pred cCCCE-EEEEeCHHHHHHHHHHHHhC--C-CeEEEeeeecCCCCHHHHHHHHhccCe---EEEEecCCcCCcHHHHHHHH
Confidence 77888 99999999999999988765 7 999999999999999999999999998 99996666678888999999
Q ss_pred HHHhhh-hCCCCeEEecCCCCCCCCCCchhhHHHHHHHchHHhhhc
Q psy4209 539 MCSVME-ITTDPVCYIGRDPSSVPASGLQAKHYLLAALNMEKKAFK 583 (856)
Q Consensus 539 i~~~~~-~~~~~~~~vgr~~~~~pa~g~~~~h~~e~~~i~~~~a~~ 583 (856)
+.+... .++.|+.++|-++...|...+...+....+.| ++.+.+
T Consensus 321 l~~~~~~~l~~pv~~vg~~d~~~~~~~l~~~~gl~~~~I-~~~i~~ 365 (369)
T 1ik6_A 321 VAEKALDRLTAPVIRLAGPDVPQSPIAADAAYAPTVERI-IKAIEY 365 (369)
T ss_dssp HHHHSGGGCSSCCEEEEECCCC------------CHHHH-HHHHHH
T ss_pred HHhhCccccCCCeEEEcCCCcCCCCHHHHHHhCcCHHHH-HHHHHH
Confidence 988753 35678999998877666444666666677777 665543
No 9
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=100.00 E-value=2.2e-43 Score=387.86 Aligned_cols=306 Identities=16% Similarity=0.147 Sum_probs=259.6
Q ss_pred HHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCEeecCcccccccCCcEEEccCcchHHHHHHHhhhccCCCC
Q psy4209 230 ALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYTPLHHIGAEAGKFHVYNSILNEMAALSFEYGYSLVDPN 309 (856)
Q Consensus 230 ~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L~~~~g~~rV~nspLsE~~i~G~~~G~a~~g~~ 309 (856)
.-+...++.++.+|+++|+|+++ .||+|+.+++|.++||+.|++|++|||.+++|+++|+|+.|.+
T Consensus 10 ~~~L~~l~~~~~~vv~~~~d~~~--------------~~g~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~r 75 (324)
T 1w85_B 10 TDALRIELKNDPNVLIFGEDVGV--------------NGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFR 75 (324)
T ss_dssp HHHHHHHHHHCTTEEEEETTCST--------------TCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhHCcCEEEEcCcccc--------------cCCcchhHHHHHHHhCCCcEEEcchhHHHHHHHHHHHHhCCCE
Confidence 34556888999999999999987 7899999999999999999999999999999999999999999
Q ss_pred cceeecccchhhHHhHHHHHHHHHHhhhhhcCC--ccCeEEEcCccCCCCC-ccCCCCchhhhhhhcCCCCcchhhhhhh
Q psy4209 310 FLVIWEAQFGDFANNAQAVFDQWISSARSKWNI--DSGLVLLLPHGIEGQG-PEHSSARPERFLELCSDSPRCVELDMKK 386 (856)
Q Consensus 310 ~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~--~~~lv~~lP~G~~g~G-p~HSsar~Er~lql~~e~~~~~~~~~~~ 386 (856)
|++ ++||++|+..|.+||.+.++..++++++ ++|+|+++|+|+.|.| +.||+ ..++||
T Consensus 76 p~~--~~t~~~F~~~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~g~~~~~g~~hs~-~~~a~~---------------- 136 (324)
T 1w85_B 76 PVP--EIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSD-SLEGLV---------------- 136 (324)
T ss_dssp EEE--BCSSGGGGGGTHHHHHTTGGGHHHHTTTSSCCCCEEEEEECSSSCCCTTSSC-CCHHHH----------------
T ss_pred EEE--EecchhHHHHHHHHHHHHHHHHhhhccCCCcCCEEEEEeccCCCCCCCcccc-cHHHHH----------------
Confidence 998 9999999999999998877777788884 6899999999886554 56666 445544
Q ss_pred hcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCccccCCCcccccCCCCceEE
Q psy4209 387 QLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKFRAYLPDTMADRNKDKVEKY 466 (856)
Q Consensus 387 ~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f~~~i~~a~~~~~~~~v~tv 466 (856)
.++|||+|+.|+||.+++++|+.+++ +++|++|++||.|+|.+. .++ +++.|..++|++.+.+++.|+ +|
T Consensus 137 -~~iP~l~V~~Psd~~e~~~~l~~a~~--~~~Pv~i~~p~~l~r~~~-----~~~-~~~~~~~~~Gk~~~~~~g~dv-~i 206 (324)
T 1w85_B 137 -AQQPGLKVVIPSTPYDAKGLLISAIR--DNDPVIFLEHLKLYRSFR-----QEV-PEGEYTIPIGKADIKREGKDI-TI 206 (324)
T ss_dssp -TTSTTCEEECCSSHHHHHHHHHHHHH--SSSCEEEEEETTTSSSCC-----EEC-CSSCCCCCTTCCEEEECCSSE-EE
T ss_pred -ccCCCCEEEeeCCHHHHHHHHHHHHH--cCCCEEEEechHhcCCCC-----CCC-CCccccccCCceEEEecCCCE-EE
Confidence 67899999999999999999999995 589999999999998743 134 556677889998876777888 99
Q ss_pred EEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHHHHHHHhcCCCCceEEEEecCCCCCCcHHHHHHHHHHhhh-h
Q psy4209 467 ILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRAFINDVSSYKNVKQVCWCQSEPENFGFWKYVQARMCSVME-I 545 (856)
Q Consensus 467 v~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~i~~sv~kt~~~~~~v~vqEe~~~~G~~~~i~~~i~~~~~-~ 545 (856)
|+||.+++.++++++++...|++++|||+++|+|||.++|.++++||++ +|||+|...++|+|++|++.+.+... .
T Consensus 207 va~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~---vvvvEe~~~~Gg~g~~v~~~l~~~~~~~ 283 (324)
T 1w85_B 207 IAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGR---AIVVQEAQRQAGIAANVVAEINERAILS 283 (324)
T ss_dssp EECTTHHHHHHHHHHHHHHTTCCEEEEECSEEESCCHHHHHHHHHHHSC---EEEEEEEETTSSSHHHHHHHHHHHHGGG
T ss_pred EEecHHHHHHHHHHHHHHhcCCCEEEEEeeeecCCCHHHHHHHHhhCCc---EEEEeCCCcCChHHHHHHHHHHhhCccc
Confidence 9999999999999987654459999999999999999999999999998 99997777789999999999998753 3
Q ss_pred CCCCeEEecCCCCCCCCCCchhhHHHHHHHchHHhhh
Q psy4209 546 TTDPVCYIGRDPSSVPASGLQAKHYLLAALNMEKKAF 582 (856)
Q Consensus 546 ~~~~~~~vgr~~~~~pa~g~~~~h~~e~~~i~~~~a~ 582 (856)
++.|+.++|.++.+.|...+...+....+.| ++.+.
T Consensus 284 l~~~v~~vg~~d~~~~~~~l~~~~gl~~~~I-~~~i~ 319 (324)
T 1w85_B 284 LEAPVLRVAAPDTVYPFAQAESVWLPNFKDV-IETAK 319 (324)
T ss_dssp CSSCCEEEEECSSSSCCGGGHHHHSCCHHHH-HHHHH
T ss_pred cCCCeEEEecCCcCCCcHHHHHHhCcCHHHH-HHHHH
Confidence 5678999999887766554555555556666 55543
No 10
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=100.00 E-value=5e-42 Score=405.91 Aligned_cols=418 Identities=15% Similarity=0.124 Sum_probs=297.6
Q ss_pred CccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCC
Q psy4209 7 YNTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRH 86 (856)
Q Consensus 7 y~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~ 86 (856)
|..+-+|+|+.||+|+++++.........+.+++++||+++++|||+|++++..|.+.| .+||+||++.|+|-+
T Consensus 171 ~~l~~livi~nnN~~~i~~~~~~~~~~~~~~~~~~a~G~~~~~VdG~d~~~l~~al~~~------~~~P~lI~v~T~kg~ 244 (616)
T 3mos_A 171 YKLDNLVAILDINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQA------KHQPTAIIAKTFKGR 244 (616)
T ss_dssp TTCTTEEEEEEECSBCSSSBCTTTTCHHHHHHHHHHTTCEEEEEETTCHHHHHHHHHSC------CSSCEEEEEECCTTT
T ss_pred cCCCcEEEEEECCCCCCcCCcccccChHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhc------CCCCEEEEEEEeccc
Confidence 45566899999999999998877776677889999999999999999999999998543 579999999999999
Q ss_pred CCCCCCCCC-CCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCcCCcC
Q psy4209 87 GHNEGDDPS-FTQPLMYEKIKQTKPLFEKYTQKLLQEKVITEDMVTLEVQAYQQKLESEYEKSKEATRFDSAPWIDVPWE 165 (856)
Q Consensus 87 GHse~D~~~-yr~~~e~~~~~~~dpi~~~~~~~Li~~G~~teeel~~i~~~~~~~v~~a~~~A~~~~~p~~~~~~~~~~~ 165 (856)
||+..+++. |- ..| +++++++++.+++++.+++. ....+.+.+.......+.
T Consensus 245 G~~~~e~~~~~H----------g~~--------------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 297 (616)
T 3mos_A 245 GITGVEDKESWH----------GKP--------------LPKNMAEQIIQEIYSQIQSK---KKILATPPQEDAPSVDIA 297 (616)
T ss_dssp TSTTTTTCSSCT----------TCC--------------CCHHHHHHHHHHHHHTCCCC---CCCCCBCCCCCCCCCCCS
T ss_pred ccccccCchhhc----------CCC--------------CCHHHHHHHHHHHHHHHHhh---hhhCcCccchhhhhhhhh
Confidence 998655442 21 112 24445544444433222111 000111111111000111
Q ss_pred CCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHhhhcchhhHHHHHHHHhhhhccCCeEEE
Q psy4209 166 GFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRVLNQRRKMIEENSLDWAMAEALALGTLLDSGHHIRL 245 (856)
Q Consensus 166 ~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~l~~r~~~~~~~~idw~~aE~la~~sll~eg~~V~l 245 (856)
....+ ..| .|..- ..+....|-..++..++.++.+|++
T Consensus 298 ~~~~~------------------------~~~--~~~~~----------------~~~a~r~a~~~~L~~l~~~d~~vv~ 335 (616)
T 3mos_A 298 NIRMP------------------------SLP--SYKVG----------------DKIATRKAYGQALAKLGHASDRIIA 335 (616)
T ss_dssp CCCCS------------------------SCC--CCCTT----------------CBCCHHHHHHHHHHHHHHHCTTEEE
T ss_pred ccccC------------------------CCc--ccccc----------------cchHHHHHHHHHHHHHHhhCCCEEE
Confidence 00000 001 11100 0011111122234456778889999
Q ss_pred eeccCCCCcccccceeeeecCCCCEeecCcccccccCCcEEEccCcchHHHHHHHhhhccCCCCcceeecccchhhHHhH
Q psy4209 246 IGQDSKRGTFSHRHAVYFDQATGNTYTPLHHIGAEAGKFHVYNSILNEMAALSFEYGYSLVDPNFLVIWEAQFGDFANNA 325 (856)
Q Consensus 246 ~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L~~~~g~~rV~nspLsE~~i~G~~~G~a~~g~~~l~~wE~qfgDF~~~A 325 (856)
.|+|+..||| |.++.++| +.|++|+||+|.+++|+++|+|+.|.++++ ++||++|+..|
T Consensus 336 ~~aD~~~~~~------------------~~~~~~~~-p~R~~d~gIaE~~~v~~a~G~A~~G~~~~~--~~~f~~Fl~~a 394 (616)
T 3mos_A 336 LDGDTKNSTF------------------SEIFKKEH-PDRFIECYIAEQNMVSIAVGCATRNRTVPF--CSTFAAFFTRA 394 (616)
T ss_dssp EESSCHHHHS------------------HHHHHHHC-GGGEEECCSCHHHHHHHHHHHHGGGCCEEE--EEEEGGGGGGG
T ss_pred EeCCcCCCcc------------------hhhHHHhC-CCCeEEcCccHHHHHHHHHHHHHcCCCCEE--EEehHHHHHHH
Confidence 9999976543 46777888 789999999999999999999999986555 89999999999
Q ss_pred HHHHHHHHHhhhhhcCCccCeEEEcCc-cC-CC-CCccCCCCchhhhhhhcCCCCcchhhhhhhhcCCCCeEEEecCCcc
Q psy4209 326 QAVFDQWISSARSKWNIDSGLVLLLPH-GI-EG-QGPEHSSARPERFLELCSDSPRCVELDMKKQLFDANWFVLYPSTPS 402 (856)
Q Consensus 326 ~~~id~~~a~~~~kw~~~~~lv~~lP~-G~-~g-~Gp~HSsar~Er~lql~~e~~~~~~~~~~~~~~~~gl~V~~pstpa 402 (856)
++||.+- .+. +.|+++.+.| |. .| .||.|.+ +| +.+++.++|||+|+.|+||.
T Consensus 395 ~dqi~~~-----a~~--~~~v~~v~~~~g~~~G~dG~tH~~--~e---------------d~a~l~~iP~l~V~~P~d~~ 450 (616)
T 3mos_A 395 FDQIRMA-----AIS--ESNINLCGSHCGVSIGEDGPSQMA--LE---------------DLAMFRSVPTSTVFYPSDGV 450 (616)
T ss_dssp HHHHHHH-----HHT--TCCEEEEEESBSGGGCTTCGGGCB--SS---------------HHHHHHTSTTEEEECCCSHH
T ss_pred HHHHHHH-----HHh--CCCeEEEEECCCccccCCCCcccC--HH---------------HHHHhcCCCCCEEEecCCHH
Confidence 9999652 122 3577777766 44 34 5788865 22 13677899999999999999
Q ss_pred hHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCccccCCCcccccCCCC--ceEEEEcCCcHHHHHHHH
Q psy4209 403 TLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKFRAYLPDTMADRNKDK--VEKYILCSGKIYYDLIEA 480 (856)
Q Consensus 403 d~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f~~~i~~a~~~~~~~~--v~tvv~~~g~v~~~l~~a 480 (856)
+++++|+.++. .+.|+++..++. ... .+ ....+..++|++.+.++++| + +||+||.+|+.+++++
T Consensus 451 e~~~~l~~a~~--~~gp~~ir~~r~----~~p-----~~-~~~~~~~~~Gka~vl~eg~d~dv-~iva~G~~v~~al~Aa 517 (616)
T 3mos_A 451 ATEKAVELAAN--TKGICFIRTSRP----ENA-----II-YNNNEDFQVGQAKVVLKSKDDQV-TVIGAGVTLHEALAAA 517 (616)
T ss_dssp HHHHHHHHHHT--CCSEEEEECCSS----CCB-----CC-SCTTCCCCTTCCEEEECCSSEEE-EEECCTHHHHHHHHHH
T ss_pred HHHHHHHHHHh--cCCCEEEEEeCC----CCC-----cc-CCCcccccCCeEEEEEeCCCCCE-EEEEeCHHHHHHHHHH
Confidence 99999999994 489988766542 111 01 11223346899887677766 6 9999999999999999
Q ss_pred HHHcCCCCcEEEEEecccCCCCHHHHHHHHhcC-CCCceEEEEecCCCCCCcHHHHHHHHHHhhhhCCCCeEEecCCCCC
Q psy4209 481 RDAANLTEQIAIARLEQISPFPYRAFINDVSSY-KNVKQVCWCQSEPENFGFWKYVQARMCSVMEITTDPVCYIGRDPSS 559 (856)
Q Consensus 481 ~~~~~~~~~vevi~l~~L~P~~~~~i~~sv~kt-~~~~~~v~vqEe~~~~G~~~~i~~~i~~~~~~~~~~~~~vgr~~~~ 559 (856)
+++...|++++|||+|+|+|||.++|.++++|| ++ +|+|+|...++|+|++|++.+.+.. ..+++++|.++
T Consensus 518 ~~L~~~Gi~v~Vidlr~l~PlD~e~i~~~~~~~~~~---vvvvEe~~~~GG~G~~v~~~l~~~~---~~~v~~~g~~~-- 589 (616)
T 3mos_A 518 ELLKKEKINIRVLDPFTIKPLDRKLILDSARATKGR---ILTVEDHYYEGGIGEAVSSAVVGEP---GITVTHLAVNR-- 589 (616)
T ss_dssp HHHHTTTCEEEEEECSEEESCCHHHHHHHHHHTTTE---EEEEEEEESTTSHHHHHHHHHTTCT---TCEEEEEEECS--
T ss_pred HHHHhcCCCEEEEEeCccCCCCHHHHHHHHHhcCCE---EEEEcCCCCCcCHHHHHHHHHHhcC---CCCEEEEeCCC--
Confidence 887666799999999999999999999999999 77 9999999999999999999998864 35799999886
Q ss_pred CCCCCc
Q psy4209 560 VPASGL 565 (856)
Q Consensus 560 ~pa~g~ 565 (856)
.+..|.
T Consensus 590 f~~~g~ 595 (616)
T 3mos_A 590 VPRSGK 595 (616)
T ss_dssp CCCCSC
T ss_pred CCCCCC
Confidence 334443
No 11
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.6e-40 Score=388.98 Aligned_cols=279 Identities=14% Similarity=0.116 Sum_probs=225.4
Q ss_pred hhccCCeEEEeeccCCCCcccccceeeeecCCCCEeecCcccccccCCcEEEccCcchHHHHHHHhhhccCCCCcceeec
Q psy4209 236 LLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYTPLHHIGAEAGKFHVYNSILNEMAALSFEYGYSLVDPNFLVIWE 315 (856)
Q Consensus 236 ll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L~~~~g~~rV~nspLsE~~i~G~~~G~a~~g~~~l~~wE 315 (856)
++.++.+|+++++|+..| +| +.++.++| +.|++|++|||.+++|+++|+|+.|.+|++ +
T Consensus 332 ~~~~d~~v~~~~~d~~~~-------------~~-----~~~~~~~~-~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~--~ 390 (621)
T 2o1s_A 332 TAAKDNKLMAITPAMREG-------------SG-----MVEFSRKF-PDRYFDVAIAEQHAVTFAAGLAIGGYKPIV--A 390 (621)
T ss_dssp HHHHCTTEEEEESSCTTT-------------TT-----CHHHHHHC-TTTEEECCSCHHHHHHHHHHHHHTTCEEEE--E
T ss_pred HHhhCcCEEEEeCcccCC-------------cC-----hHHHHHhC-CCceEecCcCHHHHHHHHHHHHHCCCEEEE--E
Confidence 344577799999999653 22 46788899 889999999999999999999999999999 9
Q ss_pred ccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCccC-CC-CCccCCCCchhhhhhhcCCCCcchhhhhhhhcCCCCe
Q psy4209 316 AQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPHGI-EG-QGPEHSSARPERFLELCSDSPRCVELDMKKQLFDANW 393 (856)
Q Consensus 316 ~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~G~-~g-~Gp~HSsar~Er~lql~~e~~~~~~~~~~~~~~~~gl 393 (856)
+ |++|+..|+|||.+.++. .+.|+|++++||. .| .||+||+. | +.+++.++|||
T Consensus 391 ~-~~~F~~~a~dqi~~~~a~------~~~pvv~~~~~~g~~g~~G~tH~~~--~---------------d~~~~~~iP~l 446 (621)
T 2o1s_A 391 I-YSTFLQRAYDQVLHDVAI------QKLPVLFAIDRAGIVGADGQTHQGA--F---------------DLSYLRCIPEM 446 (621)
T ss_dssp E-ETTGGGGGHHHHHHTTTT------TTCCCEEEEESCBCCCTTCGGGCBC--S---------------HHHHTTTSTTC
T ss_pred e-hHhHHHHHHHHHHHHHHh------cCCCEEEEEECCccCCCCCCccCch--H---------------HHHHHhcCCCC
Confidence 8 999999999888765553 3689999999954 55 79999984 2 13566899999
Q ss_pred EEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCccccCCCcccccCCCCceEEEEcCCcH
Q psy4209 394 FVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKFRAYLPDTMADRNKDKVEKYILCSGKI 473 (856)
Q Consensus 394 ~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f~~~i~~a~~~~~~~~v~tvv~~~g~v 473 (856)
+|+.|+||.+++++|+.++.. .++|++|++||..+... ++ ++. +..++|++.+.+++.|+ +||+||.++
T Consensus 447 ~v~~P~d~~e~~~~l~~a~~~-~~~Pv~i~~~r~~~~~~-------~~-~~~-~~~~~G~~~~~~~g~dv-~iva~G~~~ 515 (621)
T 2o1s_A 447 VIMTPSDENECRQMLYTGYHY-NDGPSAVRYPRGNAVGV-------EL-TPL-EKLPIGKGIVKRRGEKL-AILNFGTLM 515 (621)
T ss_dssp EEECCSSHHHHHHHHHHHHHC-CSSCEEEECCSSBCCCC-------CC-CCC-CCCCTTCCEEEECCSSE-EEEEESTTH
T ss_pred EEEecCCHHHHHHHHHHHHHc-CCCCEEEEeCCCCCCCC-------CC-Ccc-ccccCCceEEeecCCCE-EEEEecHHH
Confidence 999999999999999999953 37999999999876431 22 322 45578887766777888 999999999
Q ss_pred HHHHHHHHHHcCCCCcEEEEEecccCCCCHHHHHHHHhcCCCCceEEEEecCCCCCCcHHHHHHHHHHhhhhCCCCeEEe
Q psy4209 474 YYDLIEARDAANLTEQIAIARLEQISPFPYRAFINDVSSYKNVKQVCWCQSEPENFGFWKYVQARMCSVMEITTDPVCYI 553 (856)
Q Consensus 474 ~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~i~~sv~kt~~~~~~v~vqEe~~~~G~~~~i~~~i~~~~~~~~~~~~~v 553 (856)
+.++++ ++| ++++|||+++|+|||.++|.+++++|++ +|+|+|....+|++++|+..+.+.. +..|++++
T Consensus 516 ~~a~~A---~~G--i~v~Vi~~~~~~P~d~~~i~~~~~~~~~---vv~vEe~~~~gg~g~~v~~~l~~~~--~~~~v~~i 585 (621)
T 2o1s_A 516 PEAAKV---AES--LNATLVDMRFVKPLDEALILEMAASHEA---LVTVEENAIMGGAGSGVNEVLMAHR--KPVPVLNI 585 (621)
T ss_dssp HHHHHH---HHH--HTCEEEECCEEESCCHHHHHHHHHHCSE---EEEEEEEESTTSHHHHHHHHHHHTT--CCCCEEEE
T ss_pred HHHHHH---cCC--CCEEEEecCccCCCCHHHHHHHHccCCe---EEEEECCCCCCCHHHHHHHHHHhcC--CCCCeEEE
Confidence 999998 335 8999999999999999999999999998 9999988888999999999998864 24689999
Q ss_pred cCCCCCCCCCC---chhhHHHHHHHchHHhh
Q psy4209 554 GRDPSSVPASG---LQAKHYLLAALNMEKKA 581 (856)
Q Consensus 554 gr~~~~~pa~g---~~~~h~~e~~~i~~~~a 581 (856)
|.++...|... +...+....+.| ++.+
T Consensus 586 g~~d~f~~~g~~~~l~~~~g~~~~~I-~~~i 615 (621)
T 2o1s_A 586 GLPDFFIPQGTQEEMRAELGLDAAGM-EAKI 615 (621)
T ss_dssp EECSSCCCCSCHHHHHHHTTCSHHHH-HHHH
T ss_pred ecCCcCCCCCCHHHHHHHHCcCHHHH-HHHH
Confidence 99887665432 233334444555 4444
No 12
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=100.00 E-value=1.5e-38 Score=380.20 Aligned_cols=418 Identities=12% Similarity=0.071 Sum_probs=285.1
Q ss_pred ccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEE-EEeCC-CHHHHHHHHHHHHHHHHccCCcEEEEEeeecC
Q psy4209 8 NTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVF-HVNAD-EPEVVVSIMKLLARYRQTFKRDAFIDIIGYRR 85 (856)
Q Consensus 8 ~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~-~VDG~-D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~ 85 (856)
..+-+||||.||+|+++++...+. ...+.+++++||++++ .|||+ |++++++|.++|.+ ..+||+||++.|+|-
T Consensus 176 ~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~A~~---~~~~P~lI~~~T~kg 251 (680)
T 1gpu_A 176 KLGNLIAIYDDNKITIDGATSISF-DEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKL---SKDKPTLIKMTTTIG 251 (680)
T ss_dssp TCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHHTCEEEEESCTTTCHHHHHHHHHHHHH---CTTSCEEEEEECCTT
T ss_pred CCCcEEEEEECCCceEeccccccc-CccHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH---CCCCCEEEEEEeecc
Confidence 345599999999999999876554 4568899999999999 99999 99999999999876 468999999999999
Q ss_pred CCCCCCCC----CCCCCHHHHHHHHhcCCHHHHHHHH-------------HHHcCCCCHHHHHHHHHHHH---HHHHHHH
Q psy4209 86 HGHNEGDD----PSFTQPLMYEKIKQTKPLFEKYTQK-------------LLQEKVITEDMVTLEVQAYQ---QKLESEY 145 (856)
Q Consensus 86 ~GHse~D~----~~yr~~~e~~~~~~~dpi~~~~~~~-------------Li~~G~~teeel~~i~~~~~---~~v~~a~ 145 (856)
+||++.|. ..|++++|++.|+++.+. ..+... +.++|--.+.++.+.-+++. -++.+.+
T Consensus 252 ~G~~~~~~~~~H~~~~~~ee~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~a~~~ 330 (680)
T 1gpu_A 252 YGSLHAGSHSVHGAPLKADDVKQLKSKFGF-NPDKSFVVPQEVYDHYQKTILKPGVEANNKWNKLFSEYQKKFPELGAEL 330 (680)
T ss_dssp TTSTTTTSGGGSSSCCCHHHHHHHHHHTTC-CTTCCSCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred cccccCCCCccCCCCCCHHHHHHHHHHcCC-CcCCCccCCHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhChHHHHHH
Confidence 99998876 469999999999987665 211111 00111000111111111111 0111112
Q ss_pred HHHhhcCCCCCCCCCcCCcCCCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHhhhcchhh
Q psy4209 146 EKSKEATRFDSAPWIDVPWEGFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRVLNQRRKMIEENSLDW 225 (856)
Q Consensus 146 ~~A~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~l~~r~~~~~~~~idw 225 (856)
+...+...|. .|..-. +. .. ... +......++.
T Consensus 331 ~~~~~~~~p~-------~~~~~~-~~-~~-~~~--------------------~~~a~r~a~~----------------- 363 (680)
T 1gpu_A 331 ARRLSGQLPA-------NWESKL-PT-YT-AKD--------------------SAVATRKLSE----------------- 363 (680)
T ss_dssp HHHHTTCCCT-------TGGGGS-CC-CC-TTS--------------------CCBCHHHHHH-----------------
T ss_pred HHHhcccCCc-------hhhhhc-hh-hc-cCC--------------------cchHHHHHHH-----------------
Confidence 2222222221 121100 00 00 000 0000111111
Q ss_pred HHHHHHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCC-CEeecCcccccccCCcEEEccCcchHHHHHHHhhhc
Q psy4209 226 AMAEALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATG-NTYTPLHHIGAEAGKFHVYNSILNEMAALSFEYGYS 304 (856)
Q Consensus 226 ~~aE~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~g-g~~~~~~~L~~~~g~~rV~nspLsE~~i~G~~~G~a 304 (856)
-+...++....+|++.|+|++..+... . .| +.|..+.++..+| +.|++|++|+|.+++|++.|+|
T Consensus 364 -----~~L~~~~~~~p~v~~~~aDl~~s~~~~-------~-~g~~~f~~~~~~~~~~-p~R~~d~gIaE~~~vg~a~GlA 429 (680)
T 1gpu_A 364 -----TVLEDVYNQLPELIGGSADLTPSNLTR-------W-KEALDFQPPSSGSGNY-SGRYIRYGIREHAMGAIMNGIS 429 (680)
T ss_dssp -----HHHHHHTTTCTTEEEEESSCHHHHTCS-------C-TTCCEECCTTTSSEET-TCCEEECCSCHHHHHHHHHHHH
T ss_pred -----HHHHHHHhhCCCEEEEecccccccccc-------c-ccccccccccccccCC-CCceecCCccHHHHHHHHHHHH
Confidence 122345667788999999997410000 0 01 3444444455588 8999999999999999999999
Q ss_pred cCC-CC-cceeecccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCc-cC-CC-CCccCCCCchhhhhhhcCCCCcc
Q psy4209 305 LVD-PN-FLVIWEAQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPH-GI-EG-QGPEHSSARPERFLELCSDSPRC 379 (856)
Q Consensus 305 ~~g-~~-~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~-G~-~g-~Gp~HSsar~Er~lql~~e~~~~ 379 (856)
+.| .+ |++ .+|.+|+..++++|-. ++ . .+.|+|++++| |. .| .||+| |+ +|
T Consensus 430 ~~Gg~~~P~~---~~f~~F~~~~~~air~-~a---~---~~lpvv~v~t~~g~g~G~dG~tH-q~-~e------------ 485 (680)
T 1gpu_A 430 AFGANYKPYG---GTFLNFVSYAAGAVRL-SA---L---SGHPVIWVATHDSIGVGEDGPTH-QP-IE------------ 485 (680)
T ss_dssp HHCTTCEEEE---EEEHHHHGGGHHHHHH-HH---H---HTCCCEEEEECCSGGGCTTCTTT-CC-SS------------
T ss_pred hcCCCceEEE---eehHHHHHHHHHHHHH-HH---h---cCCCEEEEEeCCccccCCCCCcc-CC-HH------------
Confidence 998 89 999 4688888888888744 21 1 15899999976 33 24 78999 52 34
Q ss_pred hhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCcc-ccCCCccccc
Q psy4209 380 VELDMKKQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKFR-AYLPDTMADR 458 (856)
Q Consensus 380 ~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f~-~~i~~a~~~~ 458 (856)
+.+++.++|||+|+.|++|.+++++|+.++.. .++|++|+.||.-+. ++ +.+.+. .++| +.+.+
T Consensus 486 ---dla~lr~iP~l~V~~Pad~~e~~~~l~~A~~~-~~~Pv~i~~~r~~~~---------~~-~~~~~~~~~~G-~~vl~ 550 (680)
T 1gpu_A 486 ---TLAHFRSLPNIQVWRPADGNEVSAAYKNSLES-KHTPSIIALSRQNLP---------QL-EGSSIESASKG-GYVLQ 550 (680)
T ss_dssp ---HHHHHHTSSSCEEECCCSHHHHHHHHHHHHHC-SSCCEEEECCSSCBC---------CC-TTCCHHHHTTS-CEEEE
T ss_pred ---HHHHhcCCCCCEEEecCCHHHHHHHHHHHHHh-CCCcEEEEecCCCCC---------CC-CCcchhhccCC-CEEEe
Confidence 23677899999999999999999999999953 279999999875332 12 223344 5677 45546
Q ss_pred CC--CCceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHH--HHHHHhcCC-CCceEEEEecCCCCCCcHH
Q psy4209 459 NK--DKVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRA--FINDVSSYK-NVKQVCWCQSEPENFGFWK 533 (856)
Q Consensus 459 ~~--~~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~--i~~sv~kt~-~~~~~v~vqEe~~~~G~~~ 533 (856)
++ .|| +||+||.+|+.+|+||+.+...|++++|||+++|.|||.++ ++++|.|++ + +|+| ||...+|+++
T Consensus 551 ~g~~~dv-tiva~G~~v~~al~Aa~~L~~~Gi~~~Vvd~~~l~pld~~~~~~~~sv~~~~~~---~v~v-E~~~~~g~~~ 625 (680)
T 1gpu_A 551 DVANPDI-ILVATGSEVSLSVEAAKTLAAKNIKARVVSLPDFFTFDKQPLEYRLSVLPDNVP---IMSV-EVLATTCWGK 625 (680)
T ss_dssp CCSSCSE-EEEECTHHHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHSCHHHHHHHSCSSSC---EEEE-CSSCSTTGGG
T ss_pred cCCCCCE-EEEEEcHHHHHHHHHHHHHHhcCCCEEEEEcCCCCcchhhhHHHHHHHhccCCc---eEEE-eCCccccHHH
Confidence 66 577 99999999999999999876667999999999999999987 899999987 6 6556 5555578776
Q ss_pred HH
Q psy4209 534 YV 535 (856)
Q Consensus 534 ~i 535 (856)
+|
T Consensus 626 ~v 627 (680)
T 1gpu_A 626 YA 627 (680)
T ss_dssp TC
T ss_pred hc
Confidence 65
No 13
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=100.00 E-value=8.2e-38 Score=371.47 Aligned_cols=281 Identities=12% Similarity=0.071 Sum_probs=229.3
Q ss_pred hhccCCeEEEeeccCCCCcccccceeeeecCCCCEeecCcccccccCCcEEEccCcchHHHHHHHhhhccCCCCcceeec
Q psy4209 236 LLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYTPLHHIGAEAGKFHVYNSILNEMAALSFEYGYSLVDPNFLVIWE 315 (856)
Q Consensus 236 ll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L~~~~g~~rV~nspLsE~~i~G~~~G~a~~g~~~l~~wE 315 (856)
++.++.+|.++++|+..| +| +.++.++| +.|++|++|+|.+++|+++|+|+.|.||++ +
T Consensus 335 ~~~~d~~v~~i~~d~~~~-------------~~-----~~~f~~~~-~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~--~ 393 (629)
T 2o1x_A 335 WAKTDPRTFVVTPAMREG-------------SG-----LVEFSRVH-PHRYLDVGIAEEVAVTTAAGMALQGMRPVV--A 393 (629)
T ss_dssp HHHHCTTEEEEESSCTTT-------------TT-----CHHHHHHC-GGGEEECCSCHHHHHHHHHHHHHTTCEEEE--E
T ss_pred HhhhCcCEEEEeccccCC-------------cC-----hHHHHHhc-CcceEeccccHHHHHHHHHHHHHcCCEEEE--E
Confidence 344577899999999653 22 47888899 899999999999999999999999999999 8
Q ss_pred ccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCccC-CC-CCccCCCCchhhhhhhcCCCCcchhhhhhhhcCCCCe
Q psy4209 316 AQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPHGI-EG-QGPEHSSARPERFLELCSDSPRCVELDMKKQLFDANW 393 (856)
Q Consensus 316 ~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~G~-~g-~Gp~HSsar~Er~lql~~e~~~~~~~~~~~~~~~~gl 393 (856)
+ |.+|+..|++||.+.++. ...|+|++.++|. .| .||+||+. + +.+++.++|||
T Consensus 394 ~-~~~F~~~a~dqi~~~~a~------~~~pvv~~~~~~g~~g~dG~tH~~~--~---------------d~a~~r~iP~l 449 (629)
T 2o1x_A 394 I-YSTFLQRAYDQVLHDVAI------EHLNVTFCIDRAGIVGADGATHNGV--F---------------DLSFLRSIPGV 449 (629)
T ss_dssp E-EHHHHGGGHHHHHHTTTT------TTCCCEEEEESBBCCCTTCTTTCBC--S---------------HHHHTTTSTTC
T ss_pred e-cHHHHHHHHHHHHHHHhh------cCCCEEEEEECCccCCCCCcccCcc--H---------------HHHHHHccCCc
Confidence 8 999999999998776663 3589999999865 55 58999993 2 13677899999
Q ss_pred EEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCccccCCCcccccCCCCceEEEEcCCcH
Q psy4209 394 FVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKFRAYLPDTMADRNKDKVEKYILCSGKI 473 (856)
Q Consensus 394 ~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f~~~i~~a~~~~~~~~v~tvv~~~g~v 473 (856)
+|+.|+||.+++++|+.++.. ++|++|.+++..+... ++ +..+..++|++.+.+++.|+ +||+||.++
T Consensus 450 ~v~~P~d~~e~~~~~~~a~~~--~~Pv~i~~~r~~~~~~-------~~--~~~~~~~~G~~~~~~~g~dv-~iva~G~~v 517 (629)
T 2o1x_A 450 RIGLPKDAAELRGMLKYAQTH--DGPFAIRYPRGNTAQV-------PA--GTWPDLKWGEWERLKGGDDV-VILAGGKAL 517 (629)
T ss_dssp EEECCSSHHHHHHHHHHHHHS--SSCEEEECCSSBCCCC-------CT--TCCCCCCTTCCEEEECCSSE-EEEECHHHH
T ss_pred EEEecCCHHHHHHHHHHHHhC--CCCEEEEecCCCCCCC-------cc--cccccccCCceEEEeeCCCE-EEEEecHHH
Confidence 999999999999999999976 8999999998765321 11 12345678888776778888 999999999
Q ss_pred HHHHHHHHHHcCCCCcEEEEEecccCCCCHHHHHHHHhcCCCCceEEEEecCCCCCCcHHHHHHHHHHhhhhCCCCeEEe
Q psy4209 474 YYDLIEARDAANLTEQIAIARLEQISPFPYRAFINDVSSYKNVKQVCWCQSEPENFGFWKYVQARMCSVMEITTDPVCYI 553 (856)
Q Consensus 474 ~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~i~~sv~kt~~~~~~v~vqEe~~~~G~~~~i~~~i~~~~~~~~~~~~~v 553 (856)
+.++++++.+. +++|||+++|.|||.++|.+++++|++ +|+|+|....+|++++|+..+.+.. +..|++++
T Consensus 518 ~~a~~Aa~~L~----~~~Vi~~~~~~Pld~~~i~~~~~~~~~---vv~vEe~~~~gG~g~~v~~~l~~~~--~~~~v~~i 588 (629)
T 2o1x_A 518 DYALKAAEDLP----GVGVVNARFVKPLDEEMLREVGGRARA---LITVEDNTVVGGFGGAVLEALNSMN--LHPTVRVL 588 (629)
T ss_dssp HHHHHHHTTCT----TEEEEECCEEESCCHHHHHHHHHHCSE---EEEEEEEESSSSHHHHHHHHHHHTT--CCCEEEEE
T ss_pred HHHHHHHHHhc----CCEEEeeCCCCCCcHHHHHHHHhhCCc---EEEEecCCCCCCHHHHHHHHHHHhC--CCCCeEEE
Confidence 99999987653 899999999999999999999999998 9999999999999999999998864 24689999
Q ss_pred cCCCCCCCCCC---chhhHHHHHHHchHHhhhc
Q psy4209 554 GRDPSSVPASG---LQAKHYLLAALNMEKKAFK 583 (856)
Q Consensus 554 gr~~~~~pa~g---~~~~h~~e~~~i~~~~a~~ 583 (856)
|.++...+... +...+....+.| ++.+.+
T Consensus 589 g~~d~f~~~g~~~~l~~~~gl~~~~I-~~~i~~ 620 (629)
T 2o1x_A 589 GIPDEFQEHATAESVHARAGIDAPAI-RTVLAE 620 (629)
T ss_dssp EECSSCCCSCCHHHHHHHHTCSHHHH-HHHHHH
T ss_pred eeCCcCCCCCCHHHHHHHHCcCHHHH-HHHHHH
Confidence 99887665322 233344455566 555543
No 14
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-38 Score=378.79 Aligned_cols=400 Identities=14% Similarity=0.093 Sum_probs=281.7
Q ss_pred ccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEE-EEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCC
Q psy4209 8 NTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVF-HVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRH 86 (856)
Q Consensus 8 ~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~-~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~ 86 (856)
..+=+||||.||+|+++++..... ...+.+++++||++++ .|||+|+++++.|.++|.+ .++|+||++.|+|-+
T Consensus 178 ~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~----~~~P~lI~~~t~kg~ 252 (651)
T 2e6k_A 178 GLSKLIVFWDDNRISIDGPTDLAF-TEDVLARYRAYGWQTLRVEDVNDLEALRKAIKLAKL----DERPTLIAVRSHIGF 252 (651)
T ss_dssp TCTTEEEEEEECCEETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTCHHHHHHHHHHHHH----SSSCEEEEEECCTTT
T ss_pred CCCeEEEEEECCCccccccccccc-CccHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHH----CCCCEEEEEEeEecc
Confidence 344599999999999999876665 4568899999999999 9999999999999998875 689999999999999
Q ss_pred CCCCCCCCCC----CCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHH---------HHHHHHHHHHHH----------
Q psy4209 87 GHNEGDDPSF----TQPLMYEKIKQTKPLFEKYTQKLLQEKVITEDMVT---------LEVQAYQQKLES---------- 143 (856)
Q Consensus 87 GHse~D~~~y----r~~~e~~~~~~~dpi~~~~~~~Li~~G~~teeel~---------~i~~~~~~~v~~---------- 143 (856)
||++.|...| ++++|++.|++++|+ . +.... +.++..+ ..+.++++.+.+
T Consensus 253 G~~~~~~~~~H~~~~~~~e~~~~~~~~~~-~-~~~f~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 325 (651)
T 2e6k_A 253 GSPKQDSAKAHGEPLGPEAVEATRRNLGW-P-YPPFV-----VPEEVYRHMDMREKGRAWQEAWEKALEAYARAYPDLHQ 325 (651)
T ss_dssp TSTTTTSGGGTSSCCHHHHHHHHHHHHTC-C-CCTTC-----CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred cccccccccccccCCCHHHHHHHHHHcCC-C-ccccc-----CChHHHHHHHHhhhchhhHHHHHHHHHHhhhhChHHHH
Confidence 9997666655 467899999988776 2 11111 1111111 112222222222
Q ss_pred HHHHHhhcCCCCCCCCCcCCcCCCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHhhhcch
Q psy4209 144 EYEKSKEATRFDSAPWIDVPWEGFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRVLNQRRKMIEENSL 223 (856)
Q Consensus 144 a~~~A~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~l~~r~~~~~~~~i 223 (856)
.++...+...|. |.... +. ....+ ....++.
T Consensus 326 ~~~~~~~~~~p~--------~~~~~-~~-----~~~~~--------------------~~r~a~~--------------- 356 (651)
T 2e6k_A 326 ELMRRLRGELPP--------LPEEP-PS-----FDKPI--------------------ATRAASG--------------- 356 (651)
T ss_dssp HHHHHHTTCCCC--------CCCSC-CC-----CCSCB--------------------CHHHHHH---------------
T ss_pred HHHHHhcCcCCc--------hhhhc-cc-----cCccH--------------------HHHHHHH---------------
Confidence 111111222221 21100 00 00000 0111111
Q ss_pred hhHHHHHHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCEee-cCccccc-ccCCcEEEccCcchHHHHHHHh
Q psy4209 224 DWAMAEALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYT-PLHHIGA-EAGKFHVYNSILNEMAALSFEY 301 (856)
Q Consensus 224 dw~~aE~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~-~~~~L~~-~~g~~rV~nspLsE~~i~G~~~ 301 (856)
+ +...++....+|++.|+|++. .++++. .|+++.+ +| +.|++|++|+|.+++|++.
T Consensus 357 -----~--~L~~~~~~~p~~~~~~aDl~~--------------s~~~~~~~~~~f~~~~~-p~R~i~~gIaE~~~~~~a~ 414 (651)
T 2e6k_A 357 -----R--ALNLLAPRLPELLGGSADLTP--------------SNNTKAEGMEDFSRANP-LGRYLHFGVREHAMGAILN 414 (651)
T ss_dssp -----H--HHHHHGGGCTTEEEEESSCHH--------------HHTCSCTTCCBCBTTBT-TCCEEECCSCHHHHHHHHH
T ss_pred -----H--HHHHHHhhCCCEEEEeCcccc--------------ccccccccccccCccCC-CCceEecCcCHHHHHHHHH
Confidence 1 223455667789999999975 455554 6788887 89 8999999999999999999
Q ss_pred hhccCC-CCcceeec--ccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEc-CccC-CC-CCccCCCCchhhhhhhcCC
Q psy4209 302 GYSLVD-PNFLVIWE--AQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLL-PHGI-EG-QGPEHSSARPERFLELCSD 375 (856)
Q Consensus 302 G~a~~g-~~~l~~wE--~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~l-P~G~-~g-~Gp~HSsar~Er~lql~~e 375 (856)
|+|+.| .+|++ + +||.||+..| |-. .+ . .+.|+|+++ +.|. .| .||+| |+ +|-
T Consensus 415 GlA~~Gg~~P~~--~t~~~F~~~~~~a---ir~-~a---~---~~lpvv~~~t~~g~g~G~dG~tH-q~-~ed------- 473 (651)
T 2e6k_A 415 GLNLHGGYRAYG--GTFLVFSDYMRPA---IRL-AA---L---MGVPTVFVFTHDSIALGEDGPTH-QP-VEH------- 473 (651)
T ss_dssp HHHHHSSCEEEE--EEEGGGGGGSHHH---HHH-HH---H---HTCCCEEEEECCSGGGCTTCTTT-CC-SSH-------
T ss_pred HHHHcCCCEEEE--EeHHHHHHHHHHH---HHH-HH---h---cCCCEEEEEECCccccCCCcCcc-cc-HHH-------
Confidence 999998 99999 8 9999998766 311 11 1 157999995 5554 34 78999 63 442
Q ss_pred CCcchhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCc-cccCCCc
Q psy4209 376 SPRCVELDMKKQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKF-RAYLPDT 454 (856)
Q Consensus 376 ~~~~~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f-~~~i~~a 454 (856)
.+++.++|||+|+.|+++.+++++|+.++.. .++|++|++||..+.. + +.+.+ ..++| +
T Consensus 474 --------la~lr~iP~l~V~~Pad~~E~~~~l~~A~~~-~~~Pv~i~~~r~~~~~---------~-~~~~~~~~~~G-~ 533 (651)
T 2e6k_A 474 --------LMSLRAMPNLFVIRPADAYETFYAWLVALRR-KEGPTALVLTRQAVPL---------L-SPEKARGLLRG-G 533 (651)
T ss_dssp --------HHHHHTSTTCEEECCSSHHHHHHHHHHHHHC-CSSCEEEECCSSCBCC---------C-CHHHHGGGGGS-S
T ss_pred --------HHHhcCCCCcEEEecCCHHHHHHHHHHHHHc-CCCCEEEEEeCCCCCC---------C-CcchhhhhcCC-C
Confidence 3567889999999999999999999999963 2689999999876532 1 11122 24455 4
Q ss_pred ccccCC--CCceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHH--HHHHHhcCCCCceEEEEecCCCCCC
Q psy4209 455 MADRNK--DKVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRA--FINDVSSYKNVKQVCWCQSEPENFG 530 (856)
Q Consensus 455 ~~~~~~--~~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~--i~~sv~kt~~~~~~v~vqEe~~~~G 530 (856)
.+.+++ .|| +||+||.+|+.+++|++.+...|++++||++++|.|||.++ +++++.++.+. +|+|+ +...+|
T Consensus 534 ~vl~~g~~~dv-~iva~G~~v~~al~Aa~~L~~~Gi~~~Vv~~~~~~p~d~~~~~~~~~v~~~~~~--vv~vE-~~~~~G 609 (651)
T 2e6k_A 534 YVLEDVEEPQG-VLVATGSEVHLALRAQALLREKGVRVRVVSLPSFELFAAQPEAYRKEVLPPGLP--VVAVE-AGASLG 609 (651)
T ss_dssp EEEECCSSCSE-EEEECTTHHHHHHHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTSC--EEEEC-SSCCTT
T ss_pred EEEeeCCCCCE-EEEEECHHHHHHHHHHHHHHhcCCcEEEEecCcCCccccccHHHHHHHhCcCCe--EEEEe-CCccCc
Confidence 444555 677 99999999999999998765556999999999999999987 88888887542 66665 455588
Q ss_pred cHHHH
Q psy4209 531 FWKYV 535 (856)
Q Consensus 531 ~~~~i 535 (856)
++++|
T Consensus 610 ~~~~v 614 (651)
T 2e6k_A 610 WERYA 614 (651)
T ss_dssp GGGTC
T ss_pred hHHhC
Confidence 77665
No 15
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=100.00 E-value=1.2e-36 Score=363.25 Aligned_cols=408 Identities=12% Similarity=0.043 Sum_probs=283.0
Q ss_pred ccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEE-EEeC-CCHHHHHHHHHHHHHHHHccCCcEEEEEeeecC
Q psy4209 8 NTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVF-HVNA-DEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRR 85 (856)
Q Consensus 8 ~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~-~VDG-~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~ 85 (856)
..+-+||||.||+|+++++...+. ...+.+++++||++++ .||| +|++++++|.++|.+ ..++|+||++.|+|-
T Consensus 176 ~L~~li~i~d~N~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~Al~~A~~---~~~~P~lI~~~T~kg 251 (673)
T 1r9j_A 176 ALEKLIVIYDSNYISIDGSTSLSF-TEQCHQKYVAMGFHVIEVKNGDTDYEGLRKALAEAKA---TKGKPKMIVQTTTIG 251 (673)
T ss_dssp TCTTEEEEEEECSBCSSSBGGGTC-CCCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTT
T ss_pred CCCcEEEEEECCCCccccchhhcc-CHhHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHHHHH---cCCCCEEEEEecccc
Confidence 344599999999999999877665 5678999999999999 9999 999999999988864 468999999999999
Q ss_pred CCCCCCCCC----CCCCHHHHHHHHhcCCH------------HHHHHHHHHHcCCCCHHHHHHHHHHHHHH---HHHHHH
Q psy4209 86 HGHNEGDDP----SFTQPLMYEKIKQTKPL------------FEKYTQKLLQEKVITEDMVTLEVQAYQQK---LESEYE 146 (856)
Q Consensus 86 ~GHse~D~~----~yr~~~e~~~~~~~dpi------------~~~~~~~Li~~G~~teeel~~i~~~~~~~---v~~a~~ 146 (856)
+||++.|.. .+.+++|++.++++... ...|+ .+.+.|...++++++.-+++++. +...++
T Consensus 252 ~G~~~~~~~~~H~~~~~~ee~~~~~~~~~~~~~~~f~~p~~~~~~~~-~~~~~g~~~~~~w~~~~~~~~~~~P~~~~~~~ 330 (673)
T 1r9j_A 252 FGSSKQGTEKVHGAPLGEEDIANIKAKFGRDPQKKYDVDDDVRAVFR-MHIDKCSAEQKAWEELLAKYTAAFPAEGAAFV 330 (673)
T ss_dssp TTSTTTTSGGGTSSCCCHHHHHHHHHHTTSCSSCCSCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred cccccCCCcccccCCCCHHHHHHHHHhcCCCCcccccCCHHHHHHHH-HHHhhchHHHHHHHHHHHHHHhhChhHHHHHH
Confidence 999966653 35678899888765332 01111 11122221222222222222211 111122
Q ss_pred HHhhcCCCCCCCCCcCCcCCCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHhhhcchhhH
Q psy4209 147 KSKEATRFDSAPWIDVPWEGFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRVLNQRRKMIEENSLDWA 226 (856)
Q Consensus 147 ~A~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~l~~r~~~~~~~~idw~ 226 (856)
.......|. .|.... |. . + +......++.+
T Consensus 331 ~~~~~~~p~-------~~~~~~-p~-----~--~------------------~~~a~r~a~~~----------------- 360 (673)
T 1r9j_A 331 AQMRGELPS-------GWEAKL-PT-----N--S------------------SAIATRKASEN----------------- 360 (673)
T ss_dssp HHHTTCCCT-------TTGGGS-CC-----C--C------------------SCEEHHHHHHH-----------------
T ss_pred HHhcCCCCc-------hhhhhc-cc-----c--c------------------cchHHHHHHHH-----------------
Confidence 211222221 121100 00 0 0 00111111111
Q ss_pred HHHHHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCEee-c--Cccccc-ccCCcEEEccCcchHHHHHHHhh
Q psy4209 227 MAEALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYT-P--LHHIGA-EAGKFHVYNSILNEMAALSFEYG 302 (856)
Q Consensus 227 ~aE~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~-~--~~~L~~-~~g~~rV~nspLsE~~i~G~~~G 302 (856)
++..++.+..+|+++|+|+.. +++++. - +..+.+ +| +.|++|++|+|.+++|++.|
T Consensus 361 -----~L~~l~~~~p~vv~~~aDl~~--------------s~~~~~~~~~~~~f~~~~~-~~R~id~GIaE~~~~~~a~G 420 (673)
T 1r9j_A 361 -----CLAVLFPAIPALMGGSADLTP--------------SNLTRPASANLVDFSSSSK-EGRYIRFGVREHAMCAILNG 420 (673)
T ss_dssp -----HHHHHHHHCTTEEEEESSCHH--------------HHTCSCGGGCCCBCBTTBT-TCCEEECCSCHHHHHHHHHH
T ss_pred -----HHHHHHhhCCCEEEEeccccc--------------cccccccCcccccccccCC-CCCeEecCccHHHHHHHHHH
Confidence 222344556778999999975 455542 1 445776 88 89999999999999999999
Q ss_pred hccC-CCCcceeecccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCc-cC--CCCCccCCCCchhhhhhhcCCCCc
Q psy4209 303 YSLV-DPNFLVIWEAQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPH-GI--EGQGPEHSSARPERFLELCSDSPR 378 (856)
Q Consensus 303 ~a~~-g~~~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~-G~--~g~Gp~HSsar~Er~lql~~e~~~ 378 (856)
+|+. |.+|++ ++ |..|+.-+++||-+ ++ . .+.|+|+++.| |. ...||+| |+ +|
T Consensus 421 lA~~GG~~P~~--~~-~~~F~~~~~~~ir~-~a---~---~~~pvv~~~t~~g~g~G~dG~tH-q~-~e----------- 477 (673)
T 1r9j_A 421 LDAHDGIIPFG--GT-FLNFIGYALGAVRL-AA---I---SHHRVIYVATHDSIGVGEDGPTH-QP-VE----------- 477 (673)
T ss_dssp HHHHSSCEEEE--EE-EGGGGGGGHHHHHH-HH---H---HTCCCEEEEECCSGGGCTTCTTT-CC-SS-----------
T ss_pred HHhcCCCEEEE--Ee-hHHHHHHHHHHHHH-HH---h---cCCCEEEEEECCccCcCCCCccc-CC-HH-----------
Confidence 9999 599999 76 77777677788765 22 1 15799999866 33 3478999 52 44
Q ss_pred chhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCc-cccCCCcccc
Q psy4209 379 CVELDMKKQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKF-RAYLPDTMAD 457 (856)
Q Consensus 379 ~~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f-~~~i~~a~~~ 457 (856)
+.+++.++|||+|+.|+++.+++++|+.++.+ .++|++|..||.-+. .+ +.+.+ ..++| +.+.
T Consensus 478 ----dla~lr~iP~l~V~~Pad~~e~~~~l~~a~~~-~~~Pv~i~~~r~~~~---------~~-~~~~~~~~~~G-a~vl 541 (673)
T 1r9j_A 478 ----LVAALRAMPNLQVIRPSDQTETSGAWAVALSS-IHTPTVLCLSRQNTE---------PQ-SGSSIEGVRHG-AYSV 541 (673)
T ss_dssp ----HHHHHHHSTTCEEECCSSHHHHHHHHHHHHHC-TTCCEEEECCSSEEC---------CC-TTCCHHHHHTS-CEEE
T ss_pred ----HHHHHcCCCCCEEEeCCCHHHHHHHHHHHHHh-CCCeEEEEEcCCCCC---------CC-CCcccccccCC-CEEE
Confidence 13677899999999999999999999999963 378999999876432 12 33334 35677 5555
Q ss_pred cCC--CCceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHH---HHHHHhcCCCCceEEEEecCCCCCCcH
Q psy4209 458 RNK--DKVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRA---FINDVSSYKNVKQVCWCQSEPENFGFW 532 (856)
Q Consensus 458 ~~~--~~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~---i~~sv~kt~~~~~~v~vqEe~~~~G~~ 532 (856)
+++ .|| +||+||.+|+.+++|++.+... ++++||++++|.|||.++ +.++++++++ +|+|+|. ..+|++
T Consensus 542 ~~g~~~dv-~lia~G~~v~~al~Aa~~L~~~-i~~~Vv~~~sl~pld~~~~~~i~~~~~~~~~---vv~vE~~-~~~g~~ 615 (673)
T 1r9j_A 542 VDVPDLQL-VIVASGSEVSLAVDAAKALSGE-LRVRVVSMPCQELFDAQPDTYRQAVLPAGVP---VVSVEAY-VSFGWE 615 (673)
T ss_dssp ECCTTCSE-EEEECGGGHHHHHHHHHHHTTT-CCEEEEECSCHHHHHTSCHHHHHHHSCTTSC---EEEECSS-CCTTGG
T ss_pred eeCCCCCE-EEEEechhHHHHHHHHHHHHhc-CCEEEEeCCCCchhhcccHHHHHHHhccCCe---EEEEeCC-CccchH
Confidence 565 677 9999999999999999988776 999999999999999987 9999999987 7777554 448876
Q ss_pred HHH
Q psy4209 533 KYV 535 (856)
Q Consensus 533 ~~i 535 (856)
.+|
T Consensus 616 ~~v 618 (673)
T 1r9j_A 616 KYS 618 (673)
T ss_dssp GTC
T ss_pred Hhc
Confidence 655
No 16
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.6e-36 Score=356.03 Aligned_cols=407 Identities=13% Similarity=0.058 Sum_probs=274.7
Q ss_pred CccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecC
Q psy4209 7 YNTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVFHV-NADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRR 85 (856)
Q Consensus 7 y~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~~V-DG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~ 85 (856)
+..+-+|+||.||+|+++++...+. ...+.+++++||++++.| ||+|++++++|.++|.+ ..++|+||++.|+|-
T Consensus 195 ~~L~nli~i~d~N~~si~~~~~~~~-~~~~~~~~~a~G~~~~~V~DG~D~~al~~Al~~A~~---~~~~P~lI~~~T~kG 270 (700)
T 3rim_A 195 QQLGNLIVFYDRNQISIEDDTNIAL-CEDTAARYRAYGWHVQEVEGGENVVGIEEAIANAQA---VTDRPSFIALRTVIG 270 (700)
T ss_dssp TTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTT
T ss_pred cCCCcEEEEEECCCcccccchhhcc-chhHHHHHHHcCCeEEEECCCCCHHHHHHHHHHHHH---cCCCCEEEEEEEEee
Confidence 3445599999999999999877654 566899999999999999 99999999999998854 478999999999999
Q ss_pred CCCCCCCCC-----CCCCHHHHHHHHhc---C---------CHHHHHHHHHHHcCCCCHHHHHHHHHHHHH---HHHHHH
Q psy4209 86 HGHNEGDDP-----SFTQPLMYEKIKQT---K---------PLFEKYTQKLLQEKVITEDMVTLEVQAYQQ---KLESEY 145 (856)
Q Consensus 86 ~GHse~D~~-----~yr~~~e~~~~~~~---d---------pi~~~~~~~Li~~G~~teeel~~i~~~~~~---~v~~a~ 145 (856)
+||+...+. .--.+++++..++. + .+...|++ ..++|-..++++++.-+++++ ++.+.+
T Consensus 271 ~G~~~~e~~~~~Hg~~~~~e~~~~~~~~l~~~~~~~f~v~~~v~~~~~~-~~~~g~~~~~~w~~~~~~~~~~~p~~~~~~ 349 (700)
T 3rim_A 271 YPAPNLMDTGKAHGAALGDDEVAAVKKIVGFDPDKTFQVREDVLTHTRG-LVARGKQAHERWQLEFDAWARREPERKALL 349 (700)
T ss_dssp TTCTTTTTSHHHHHSCCCHHHHHHHHHHHTCCTTCSSCCCHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ecCCccCCCccccCCCCCHHHHHHHHHHcCCCcccCccCCHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHhhChHHHHHH
Confidence 999853321 12255666655432 1 12233433 233342222333332222221 222333
Q ss_pred HHHhhcCCCCCCCCCcCCcCCCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHhhhcchhh
Q psy4209 146 EKSKEATRFDSAPWIDVPWEGFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRVLNQRRKMIEENSLDW 225 (856)
Q Consensus 146 ~~A~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~l~~r~~~~~~~~idw 225 (856)
+...+.+.|. . |.... |. ...+ + +.......+
T Consensus 350 ~~~~~~~~p~--~-----~~~~~-p~-----~~~~----------------~-~~~atr~a~------------------ 381 (700)
T 3rim_A 350 DRLLAQKLPD--G-----WDADL-PH-----WEPG----------------S-KALATRAAS------------------ 381 (700)
T ss_dssp HHHHTTCCCT--T-----TTSSC-CC-----CCTT----------------S-SCEEHHHHH------------------
T ss_pred HHHhccCCCc--c-----hhhhc-cc-----cccc----------------c-cchHHHHHH------------------
Confidence 3333333331 1 11100 00 0000 0 001111111
Q ss_pred HHHHHHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCE-eecCccccccc-----CC----cEEEccCcchHH
Q psy4209 226 AMAEALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNT-YTPLHHIGAEA-----GK----FHVYNSILNEMA 295 (856)
Q Consensus 226 ~~aE~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~-~~~~~~L~~~~-----g~----~rV~nspLsE~~ 295 (856)
.+ +...++.+..+|++.++|+.. .+++ ++.+.++.++| |+ .|++|++|+|.+
T Consensus 382 --~~--~L~~l~~~~p~vv~~saDl~~--------------s~~t~~~~~~~f~~~~~~~~~~p~~~~~R~id~GIaE~~ 443 (700)
T 3rim_A 382 --GA--VLSALGPKLPELWGGSADLAG--------------SNNTTIKGADSFGPPSISTKEYTAHWYGRTLHFGVREHA 443 (700)
T ss_dssp --HH--HHHHHTTTCTTEEEEESSCHH--------------HHTCSCTTCCEESCGGGCCSSCCEETTCCEEECCSCHHH
T ss_pred --HH--HHHHHHhhCCCEEEEeCCccC--------------CCCcccccchhhcccccccccCCcccCCceeecCccHHH
Confidence 11 223456678889999999975 2333 35678888888 34 699999999999
Q ss_pred HHHHHhhhccC-CCCcceeecccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCc-cC--CCCCccCCCCchhhhhh
Q psy4209 296 ALSFEYGYSLV-DPNFLVIWEAQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPH-GI--EGQGPEHSSARPERFLE 371 (856)
Q Consensus 296 i~G~~~G~a~~-g~~~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~-G~--~g~Gp~HSsar~Er~lq 371 (856)
++|++.|+|+. |.+|++ + +|..|+.-++.+|-. ++ . .+.|++++++| |+ ...||+|.+ +|
T Consensus 444 mv~~A~GlA~~gG~~Pv~--~-tF~~F~d~~~~~ir~-~a---l---~~lpvv~v~thdg~gvG~dG~THq~--ie---- 507 (700)
T 3rim_A 444 MGAILSGIVLHGPTRAYG--G-TFLQFSDYMRPAVRL-AA---L---MDIDTIYVWTHDSIGLGEDGPTHQP--IE---- 507 (700)
T ss_dssp HHHHHHHHHHHSSCEEEE--E-EEGGGGGGGHHHHHH-HH---H---HTCCCEEEEECCSGGGCTTCTTTSC--SS----
T ss_pred HHHHHHHHHHcCCCEEEE--E-ecHHHHHHHHHHHHH-hc---C---CCCCEEEEEeCCCcccCCCCCccCC--hh----
Confidence 99999999999 999999 8 444444334445532 21 1 15899999987 33 335899944 33
Q ss_pred hcCCCCcchhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhhCCCCC---cEEEEecccccCCCCCCCcccccccCC-Cc
Q psy4209 372 LCSDSPRCVELDMKKQLFDANWFVLYPSTPSTLFHALRRQLLLPFRR---PLVVLTPKALLRHPQVRSTFEDLSLDT-KF 447 (856)
Q Consensus 372 l~~e~~~~~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~---P~i~~e~K~L~r~~~~~s~~~e~~~~~-~f 447 (856)
+.+++.++|||+|+.|++|.+++++|+.++.. ++ |++|..|+.-+.. + +.+ .+
T Consensus 508 -----------d~a~lr~iPnl~V~~Pad~~e~~~~l~~Ai~~--~~~~~Pv~ir~~r~~~~~---------~-~~~~~~ 564 (700)
T 3rim_A 508 -----------HLSALRAIPRLSVVRPADANETAYAWRTILAR--RNGSGPVGLILTRQGVPV---------L-DGTDAE 564 (700)
T ss_dssp -----------HHHHHHTSTTCEEECCSSHHHHHHHHHHHHTT--TTCSSCEEEECCSSEECC---------C-TTCCHH
T ss_pred -----------HHHHHhcCCCCEEEeCCCHHHHHHHHHHHHHc--cCCCCCEEEEeccccCCC---------c-Cccccc
Confidence 23778999999999999999999999999965 54 9999988654321 1 222 35
Q ss_pred cccCCCcccccCCC--------CceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHH--HHHHHHhc--CCC
Q psy4209 448 RAYLPDTMADRNKD--------KVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYR--AFINDVSS--YKN 515 (856)
Q Consensus 448 ~~~i~~a~~~~~~~--------~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~--~i~~sv~k--t~~ 515 (856)
..++|+ .+.++++ || +||+||.+|+.+|++|+.+...|++++||++++|.|||.+ +++++|.+ +++
T Consensus 565 ~~~~G~-~vlr~g~~~~~~~~~dv-tiia~G~~v~~al~Aa~~L~~~Gi~~~VVd~~~i~p~D~~~~~~~~~v~~~~~~~ 642 (700)
T 3rim_A 565 GVARGG-YVLSDAGGLQPGEEPDV-ILIATGSEVQLAVAAQTLLADNDILARVVSMPCLEWFEAQPYEYRDAVLPPTVSA 642 (700)
T ss_dssp HHHHSC-EEEECCSCCCTTCCCSE-EEEECGGGHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHSCHHHHHHHSCTTCCC
T ss_pred ccCCCc-EEEecCCccccCCCCCE-EEEEechHHHHHHHHHHHHHhcCCCeEEEEeccccccCcccHHHHHHHhcccceE
Confidence 667776 4546664 77 9999999999999999987666799999999999999995 78888866 555
Q ss_pred CceEEEEecCCCC
Q psy4209 516 VKQVCWCQSEPEN 528 (856)
Q Consensus 516 ~~~~v~vqEe~~~ 528 (856)
+|.|+|....
T Consensus 643 ---~vtvEe~~~~ 652 (700)
T 3rim_A 643 ---RVAVEAGVAQ 652 (700)
T ss_dssp ---EEEECSSCSG
T ss_pred ---EEEEeCCCch
Confidence 7777665444
No 17
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=100.00 E-value=1e-36 Score=363.99 Aligned_cols=421 Identities=10% Similarity=0.045 Sum_probs=284.2
Q ss_pred CccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEE-EEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecC
Q psy4209 7 YNTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVF-HVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRR 85 (856)
Q Consensus 7 y~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~-~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~ 85 (856)
|..+-+|+||.||+|+++++...+. ...+.+++++||++++ .|||+|++++++|.++|.+ ..++|+||++.|+|-
T Consensus 173 ~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~---~~~~P~lI~~~T~kg 248 (669)
T 2r8o_A 173 LKLGKLIAFYDDNGISIDGHVEGWF-TDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARA---VTDKPSLLMCKTIIG 248 (669)
T ss_dssp TTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHH---CCSSCEEEEEECCTT
T ss_pred cCCCcEEEEEECCCcEecccccccc-CccHHHHHHHCCCeEEeEECCCCHHHHHHHHHHHHh---cCCCCEEEEEEeEec
Confidence 3445599999999999999866554 4568899999999999 9999999999999999875 467999999999999
Q ss_pred CCCCC-CCC----CCCCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHH-----HHHHHHHHHHHHHHhhcCCCC
Q psy4209 86 HGHNE-GDD----PSFTQPLMYEKIKQTKPLFEKYTQKLLQEKVITEDMVTLEV-----QAYQQKLESEYEKSKEATRFD 155 (856)
Q Consensus 86 ~GHse-~D~----~~yr~~~e~~~~~~~dpi~~~~~~~Li~~G~~teeel~~i~-----~~~~~~v~~a~~~A~~~~~p~ 155 (856)
.||+. .|+ ..|++++|++.|+++.+. . +... .+.++..+.+. +.......+.+..-.+ ..|.
T Consensus 249 ~G~~~~~~~~~~H~~~~~~ee~~~~~~~~~~-~-~~~f-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~ 320 (669)
T 2r8o_A 249 FGSPNKAGTHDSHGAPLGDAEIALTREQLGW-K-YAPF-----EIPSEIYAQWDAKEAGQAKESAWNEKFAAYAK-AYPQ 320 (669)
T ss_dssp TTCTTTTTSGGGTSSCCCHHHHHHHHHHHTC-C-CCTT-----CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HCHH
T ss_pred cCcCCcCCCCcccCCCCCHHHHHHHHHHcCC-C-cccc-----cCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhh-hChH
Confidence 99983 443 458999999998875543 1 1111 11122111111 0011111111111000 0000
Q ss_pred CCCCCcCCcCCCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHH---HHHHHHHhhhcchhhHHHHHHH
Q psy4209 156 SAPWIDVPWEGFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRV---LNQRRKMIEENSLDWAMAEALA 232 (856)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~---l~~r~~~~~~~~idw~~aE~la 232 (856)
. ...+..+.. ..+| +.+. ..+.+. +... +..+.--.|=..+
T Consensus 321 ~--------------------------~~~~~~~~~--~~lp-~~~~--~~~~~~~~~~~~~-----~~~~~~r~a~~~~ 364 (669)
T 2r8o_A 321 E--------------------------AAEFTRRMK--GEMP-SDFD--AKAKEFIAKLQAN-----PAKIASRKASQNA 364 (669)
T ss_dssp H--------------------------HHHHHHHHH--TCCC-TTHH--HHHHHHHHHHHHS-----CCCEEHHHHHHHH
T ss_pred H--------------------------HHHHHHHhc--ccCC-hhhh--hhhHHHhhhhcCC-----CccHHHHHHHHHH
Confidence 0 000111100 0233 2221 111110 0000 0111111122233
Q ss_pred HhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCEe-ecCcccccccCCcEEEccCcchHHHHHHHhhhccC-CCCc
Q psy4209 233 LGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTY-TPLHHIGAEAGKFHVYNSILNEMAALSFEYGYSLV-DPNF 310 (856)
Q Consensus 233 ~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~-~~~~~L~~~~g~~rV~nspLsE~~i~G~~~G~a~~-g~~~ 310 (856)
...++....+|++.|+|++. .++++ +.+.++.++| +.|++|++|+|.+++|++.|+|+. |.+|
T Consensus 365 L~~l~~~~p~v~~~~aDl~~--------------s~~~~~~~~~~f~~~~-p~R~id~GIaE~~~v~~a~GlA~~gG~~P 429 (669)
T 2r8o_A 365 IEAFGPLLPEFLGGSADLAP--------------SNLTLWSGSKAINEDA-AGNYIHYGVREFGMTAIANGISLHGGFLP 429 (669)
T ss_dssp HHHHTTTCTTEEEEESSCHH--------------HHTCCCTTCCBTTTCT-TCSEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred HHHHHhhCCCeEEecCcccc--------------cccccccccccccccC-CCCeeecchhHHHHHHHHHHHHHcCCCeE
Confidence 45677788999999999975 45555 5678888899 899999999999999999999999 8999
Q ss_pred ceeecccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCccC--CC-CCccCCCCchhhhhhhcCCCCcchhhhhhhh
Q psy4209 311 LVIWEAQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPHGI--EG-QGPEHSSARPERFLELCSDSPRCVELDMKKQ 387 (856)
Q Consensus 311 l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~G~--~g-~Gp~HSsar~Er~lql~~e~~~~~~~~~~~~ 387 (856)
++ ++|..|+..++++|-+ ++ . .+.|+|++++|+. .| .||+|.+ +|- .+++
T Consensus 430 ~~---~tf~~F~~~~~~~ir~-~a---~---~~lpvv~~~t~~g~~~G~dG~tHq~--~ed---------------la~l 482 (669)
T 2r8o_A 430 YT---STFLMFVEYARNAVRM-AA---L---MKQRQVMVYTHDSIGLGEDGPTHQP--VEQ---------------VASL 482 (669)
T ss_dssp EE---EEEGGGGGTTHHHHHH-HH---H---TTCCCEEEEECCSGGGCTTCTTTCC--SSH---------------HHHH
T ss_pred EE---eehHHHHHHHHHHHHH-HH---h---cCCCEEEEEeCCCcCcCCCCCccCC--HHH---------------HHHh
Confidence 99 4788888888888766 22 1 3689999998743 23 7899943 442 3667
Q ss_pred cCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCc---cccCCCcccccC--C-C
Q psy4209 388 LFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKF---RAYLPDTMADRN--K-D 461 (856)
Q Consensus 388 ~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f---~~~i~~a~~~~~--~-~ 461 (856)
.++|||+|+.|+++.+++++|+.++.. .+.|++|..+|..+.. + +.+.+ ..++| +.+.++ + .
T Consensus 483 r~iP~l~V~~Pad~~E~~~~l~~a~~~-~~~Pv~i~~~r~~~~~---------~-~~~~~~~~~~~~G-~~vl~~~~g~~ 550 (669)
T 2r8o_A 483 RVTPNMSTWRPCDQVESAVAWKYGVER-QDGPTALILSRQNLAQ---------Q-ERTEEQLANIARG-GYVLKDCAGQP 550 (669)
T ss_dssp HTSTTCEEECCSSHHHHHHHHHHHHHC-SSSCEEEECCSSEECC---------C-CCCHHHHHHGGGS-CEEEECCSSSC
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHh-CCCcEEEEeCCCCCCC---------C-CCccchhhhccCC-CEEEeccCCCC
Confidence 899999999999999999999999963 2789999999876632 1 22221 14566 444455 5 6
Q ss_pred CceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHH--HHHHHhcCC-CCceEEEEecCCCCCCcHH
Q psy4209 462 KVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRA--FINDVSSYK-NVKQVCWCQSEPENFGFWK 533 (856)
Q Consensus 462 ~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~--i~~sv~kt~-~~~~~v~vqEe~~~~G~~~ 533 (856)
|| +||+||.+|+.+|+|++.+...|++++||++++|.|||.++ +++++.++. + .+|+|+|.. .+|++.
T Consensus 551 dv-~iva~G~~v~~al~Aa~~L~~~Gi~~~Vv~~~~~~pld~~~~~~~~~v~~~~~~--~vv~vE~~~-~~g~~~ 621 (669)
T 2r8o_A 551 EL-IFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVT--ARVAVEAGI-ADYWYK 621 (669)
T ss_dssp SE-EEEECGGGHHHHHHHHHHHHHHTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCC--CEEEEEEEE-GGGGHH
T ss_pred CE-EEEEECHHHHHHHHHHHHHHhcCCCeEEEEeccCCccccchHHHHHHhccccCc--eEEEEeCCc-hhhHHH
Confidence 77 99999999999999998765445999999999999999886 777777763 2 177776554 467543
No 18
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=100.00 E-value=9.5e-36 Score=355.78 Aligned_cols=424 Identities=13% Similarity=0.086 Sum_probs=280.6
Q ss_pred CccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEE-EEeCC-CHHHHHHHHHHHHHHHHccCCcEEEEEeeec
Q psy4209 7 YNTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVF-HVNAD-EPEVVVSIMKLLARYRQTFKRDAFIDIIGYR 84 (856)
Q Consensus 7 y~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~-~VDG~-D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR 84 (856)
|..+-+|+||.||+|+++++..... ...+.+++++||++++ .|||+ |+++++.|.++|.+ ..++|+||++.|+|
T Consensus 186 ~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~a~~---~~~~P~lI~~~T~k 261 (675)
T 1itz_A 186 WGLGKLIAFYDDNHISIDGDTEIAF-TEDVSTRFEALGWHTIWVKNGNTGYDDIRAAIKEAKA---VTDKPTLIKVTTTI 261 (675)
T ss_dssp TTCTTEEEEEEECSEETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHH---CCSSCEEEEEECCT
T ss_pred hCCCcEEEEEECCCccCCCChhhhc-ChhHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHH---CCCCeEEEEEeeec
Confidence 3446799999999999998876654 5668899999999999 99999 99999999988764 36799999999999
Q ss_pred CCCCCC-CCCCC----CCCHHHHHHHHhcC-----CH------HHHHHHHHHHcCCCCHHHHHHHHHHHHH---HHHHHH
Q psy4209 85 RHGHNE-GDDPS----FTQPLMYEKIKQTK-----PL------FEKYTQKLLQEKVITEDMVTLEVQAYQQ---KLESEY 145 (856)
Q Consensus 85 ~~GHse-~D~~~----yr~~~e~~~~~~~d-----pi------~~~~~~~Li~~G~~teeel~~i~~~~~~---~v~~a~ 145 (856)
-+||+. .|... ..++++++.++++. |. ...|++. +++|-..+.++.+.-.++.. ++...+
T Consensus 262 g~G~~~~~~~~~~H~~~~~~e~~~~~~~~~~~~~~~f~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~p~~~~~~ 340 (675)
T 1itz_A 262 GFGSPNKANSYSVHGSALGAKEVEATRQNLGWPYDTFFVPEDVKSHWSRH-TPEGAALEADWNAKFAEYEKKYADDAATL 340 (675)
T ss_dssp TTTCTTTTTSGGGTSSCCCHHHHHHHHHHHTCCCCTTCCCHHHHHHHTTH-HHHHHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred ccCcccccCcccccCCCCCHHHHHHHHHHcCCCcccccCChhHHHHHHHH-HhhhhhhHHHHHHHHHHhhhhChHHHHHH
Confidence 999985 33322 34677887776542 11 0011110 01110001111111111111 122223
Q ss_pred HHHhhcCCCCCCCCCcCCcCCCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHhhhcchhh
Q psy4209 146 EKSKEATRFDSAPWIDVPWEGFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRVLNQRRKMIEENSLDW 225 (856)
Q Consensus 146 ~~A~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~l~~r~~~~~~~~idw 225 (856)
+...+.+.|. .|.... +. .. .....+ ....++.
T Consensus 341 ~~~~~~~~p~-------~~~~~~-~~-~~-~~~~~~--------------------a~r~a~~----------------- 373 (675)
T 1itz_A 341 KSIITGELPT-------GWVDAL-PK-YT-PESPGD--------------------ATRNLSQ----------------- 373 (675)
T ss_dssp HHHHHCCCCT-------TGGGGS-CC-CC-TTSCCB--------------------CHHHHHH-----------------
T ss_pred HHHhcccCCc-------hhhhhh-hh-hc-cCCcch--------------------HHHHHHH-----------------
Confidence 3333333321 121100 00 00 000001 0111111
Q ss_pred HHHHHHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCEee-cCccccc-ccCCcEEEccCcchHHHHHHHhhh
Q psy4209 226 AMAEALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYT-PLHHIGA-EAGKFHVYNSILNEMAALSFEYGY 303 (856)
Q Consensus 226 ~~aE~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~-~~~~L~~-~~g~~rV~nspLsE~~i~G~~~G~ 303 (856)
-+...++....+|++.|+|++. .+++.. -+..+.+ +| +.|++|++|+|.+++|++.|+
T Consensus 374 -----~~L~~i~~~~p~v~~~~aDl~~--------------s~~~~~~g~~~f~~~~~-~~R~id~gIaE~~~v~~a~Gl 433 (675)
T 1itz_A 374 -----QCLNALANVVPGLIGGSADLAS--------------SNMTLLKMFGDFQKDTA-EERNVRFGVREHGMGAICNGI 433 (675)
T ss_dssp -----HHHHHHHHHCTTEEEEESSCHH--------------HHTCCCTTCCBCCTTCT-TCCBCCCCSCHHHHHHHHHHH
T ss_pred -----HHHHHHHHhCCCEEEEeccccc--------------cccccccccccccccCC-CCCeEeecccHHHHHHHHHHH
Confidence 1122334456678899999975 333321 2334776 88 799999999999999999999
Q ss_pred ccCC--CCcceeecccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCcc-C--CCCCccCCCCchhhhhhhcCCCCc
Q psy4209 304 SLVD--PNFLVIWEAQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPHG-I--EGQGPEHSSARPERFLELCSDSPR 378 (856)
Q Consensus 304 a~~g--~~~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~G-~--~g~Gp~HSsar~Er~lql~~e~~~ 378 (856)
|+.| .+|++ ++ |.+|+.-++.+|-+ ++ . .+.|+|+++.|+ . ...||+| |+ +|
T Consensus 434 A~~G~~~~P~~--~t-~~~F~~~~~~~ir~-~a---~---~~lpvv~~~t~~g~g~G~dG~tH-q~-~e----------- 490 (675)
T 1itz_A 434 ALHSPGFVPYC--AT-FFVFTDYMRGAMRI-SA---L---SEAGVIYVMTHDSIGLGEDGPTH-QP-IE----------- 490 (675)
T ss_dssp HTTCTTCEEEE--EE-EGGGHHHHHHHHHH-HH---H---HTCCCEEEEECCSGGGCTTCTTT-CC-SS-----------
T ss_pred HhcCCCCEEEE--EE-HHHHHHHHHHHHHH-HH---h---cCCCEEEEEECCccccCCCCCCc-Cc-HH-----------
Confidence 9999 99999 77 77787777888754 21 1 258999998663 3 2378999 52 44
Q ss_pred chhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCc-cccCCCcccc
Q psy4209 379 CVELDMKKQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKF-RAYLPDTMAD 457 (856)
Q Consensus 379 ~~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f-~~~i~~a~~~ 457 (856)
+.+++.++|||+|+.|+++.+++++|+.++.. .++|++|..++.-+. .+ +.+.+ ..++| +.+.
T Consensus 491 ----dla~lr~iP~l~V~~Pad~~e~~~~l~~a~~~-~~~Pv~i~~~r~~~p---------~~-~~~~~~~~~~G-a~vl 554 (675)
T 1itz_A 491 ----HLVSFRAMPNILMLRPADGNETAGAYKVAVLN-RKRPSILALSRQKLP---------HL-PGTSIEGVEKG-GYTI 554 (675)
T ss_dssp ----HHHHHHSSSSCEEECCCSHHHHHHHHHHHHHC-TTSCEEEEECSSCBC---------CC-TTCCHHHHTTS-SEEE
T ss_pred ----HHHHhccCCCeEEEECCCHHHHHHHHHHHHHh-CCCcEEEEecCCCCC---------CC-CCccccccccC-CEEE
Confidence 23677899999999999999999999999953 279999999874331 12 22334 35677 5554
Q ss_pred cC---C--CCceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHH--HHHHHhcCC-CCceEEEEecCCCCC
Q psy4209 458 RN---K--DKVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRA--FINDVSSYK-NVKQVCWCQSEPENF 529 (856)
Q Consensus 458 ~~---~--~~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~--i~~sv~kt~-~~~~~v~vqEe~~~~ 529 (856)
++ + .|| +||+||.+|+.+++|++.+...|++++||++++|.|||.++ ++++|.++. +. +|+|+ |...+
T Consensus 555 ~~~~~G~~~dv-~iva~G~~v~~al~Aa~~L~~~Gi~v~Vv~~~~~~pld~~~~~~~~~v~~~~~~~--vv~vE-~~~~~ 630 (675)
T 1itz_A 555 SDNSTGNKPDL-IVMGTGSELEIAAKAADELRKEGKTVRVVSFVSWELFDEQSDEYKESVLPAAVTA--RISIE-AGSTL 630 (675)
T ss_dssp EECCSTTCCSE-EEEECGGGHHHHHHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCC--EEEEC-SSCCT
T ss_pred ecccCCCCCCE-EEEEECHHHHHHHHHHHHHHhcCCcEEEEEeccCcccccchHHHHHHHhccCCce--EEEEE-CCccc
Confidence 55 5 677 99999999999999998765456999999999999999987 889998884 31 66665 45557
Q ss_pred CcHHHHHHHHHHhhhhCCCCeEEecCC
Q psy4209 530 GFWKYVQARMCSVMEITTDPVCYIGRD 556 (856)
Q Consensus 530 G~~~~i~~~i~~~~~~~~~~~~~vgr~ 556 (856)
|+++++ ..+.+++|-+
T Consensus 631 G~~~~~-----------~~~~~~ig~d 646 (675)
T 1itz_A 631 GWQKYV-----------GAQGKAIGID 646 (675)
T ss_dssp TTHHHH-----------CSSCEEECCC
T ss_pred cHHHhc-----------CCCceEEEeC
Confidence 876542 1356778873
No 19
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=100.00 E-value=1.1e-35 Score=355.15 Aligned_cols=414 Identities=13% Similarity=0.073 Sum_probs=268.5
Q ss_pred ccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEEE-EeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCC
Q psy4209 8 NTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVFH-VNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRH 86 (856)
Q Consensus 8 ~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~~-VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~ 86 (856)
..+=+|+||.||+|+++++...+. ...+.+++++||++++. |||+|++++++|.++| ++.++|+||++.|+|-+
T Consensus 215 ~L~~livI~dnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~Al~~A----~~~~~P~lI~v~T~kG~ 289 (711)
T 3uk1_A 215 KLNKLIALYDDNGISIDGDVVNWF-HDDTPKRFEAYGWNVIPNVNGHDVDAIDAAIAKA----KRSDKPSLICCKTRIGN 289 (711)
T ss_dssp TCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHH----TTCSSCEEEEEEC----
T ss_pred CCCcEEEEEECCCcccccchhhhc-CCCHHHHHHHcCCcEEEEeCCCCHHHHHHHHHHH----HhCCCCEEEEEcccccc
Confidence 344599999999999998876664 45689999999999999 9999999999988776 44689999999999999
Q ss_pred CCCC-CCCCCCC----CHHHHHHHHh-----cCCH---HHHHHHH--HHHcCCCCHHHHHHHHHHHHH---HHHHHHHHH
Q psy4209 87 GHNE-GDDPSFT----QPLMYEKIKQ-----TKPL---FEKYTQK--LLQEKVITEDMVTLEVQAYQQ---KLESEYEKS 148 (856)
Q Consensus 87 GHse-~D~~~yr----~~~e~~~~~~-----~dpi---~~~~~~~--Li~~G~~teeel~~i~~~~~~---~v~~a~~~A 148 (856)
||+. .+...|- .+++++..++ .+|. -..|..+ + ++|...++++++.-+++++ ++.+.++..
T Consensus 290 G~~~~e~~~~~Hg~~l~~e~~~~~~~~l~~~~~pF~~~~~~~~~~~~~-~~g~~~~~~w~~~~~~~~~~~p~~a~~~~~~ 368 (711)
T 3uk1_A 290 GAATKAGGHDVHGAPLGADEIAKTREALGWTWAPFVIPQEVYAAWDAK-EAGKRSEDDWNAAFAQYRAKYPAEAAEFERR 368 (711)
T ss_dssp ----------------CHHHHHHHHHHHTCCCCTTCCCHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCCCCCCcccccCCCCCHHHHHHHHHHhCCCCCCccCChHHHHHHHHH-hccchhHHHHHHHHHHHHhhChhhHHHHHHh
Confidence 9974 4444332 3456665443 1221 0111111 1 2221111111111111111 111112221
Q ss_pred hhcCCCCCCCCCcCCcCCCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccc--hhHHHHHHHHHHHHHhhhcchhhH
Q psy4209 149 KEATRFDSAPWIDVPWEGFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFK--LHRSLQRVLNQRRKMIEENSLDWA 226 (856)
Q Consensus 149 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~--~h~~l~~~l~~r~~~~~~~~idw~ 226 (856)
.+.+. | ++|. +.+.+.+..+.. ..+.--
T Consensus 369 ~~~~~-------------------------------------------p-~~~~~~~~~~~~~~~~~~------~~~atR 398 (711)
T 3uk1_A 369 MAGTL-------------------------------------------P-ADWAAKAAAIVAGANERG------ETVATR 398 (711)
T ss_dssp HHTCC-------------------------------------------C-TTHHHHHHHHHHHHHHHC------CCEEHH
T ss_pred hccCC-------------------------------------------C-chHHHHhhHhhhhhhccc------cchhHH
Confidence 11111 1 1110 000011100000 000000
Q ss_pred HHHHHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCEe-ecCcccccc---cC--CcEEEccCcchHHHHHHH
Q psy4209 227 MAEALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTY-TPLHHIGAE---AG--KFHVYNSILNEMAALSFE 300 (856)
Q Consensus 227 ~aE~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~-~~~~~L~~~---~g--~~rV~nspLsE~~i~G~~ 300 (856)
.|=.-+...++....+|++.|+|++. +++++ +.++++.++ |+ +.|++|++|+|.+++|++
T Consensus 399 ~A~~~~L~~l~~~~p~vv~~~aDl~~--------------s~~~~~~~~~~f~~~~~~~p~~~~R~~d~GIaE~~mv~~A 464 (711)
T 3uk1_A 399 KASQQTIEGLAAVLPELLGGSADLTG--------------SNLTNWKASKAVRANADGPGVQWGNHINYGVREFGMSAAI 464 (711)
T ss_dssp HHHHHHHHHHHHHCTTEEEEESSCHH--------------HHTCCCTTCCBCEECSSSSSEECCSEEECCSCHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEeccccC--------------cCCcccccchhhhhhhccCCCCCCcEEEeCccHHHHHHHH
Confidence 01112333556678889999999975 45554 567888888 84 389999999999999999
Q ss_pred hhhccC-CCCcceeecccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCccC---CCCCccCCCCchhhhhhhcCCC
Q psy4209 301 YGYSLV-DPNFLVIWEAQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPHGI---EGQGPEHSSARPERFLELCSDS 376 (856)
Q Consensus 301 ~G~a~~-g~~~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~G~---~g~Gp~HSsar~Er~lql~~e~ 376 (856)
.|+|+. |.+|++ ++ |.+|+..|+++|.. . + + .+.|+++++.|+. ...||+|.+ +|
T Consensus 465 aGlA~~~G~~Pv~--~~-f~~F~~~~~~~ir~-~--a-~---~~lpv~~v~thdg~gvG~dG~THq~--~e--------- 523 (711)
T 3uk1_A 465 NGLVLHGGYKPFG--GT-FLTFSDYSRNALRV-A--A-L---MKVPSIFVFTHDSIGLGEDGPTHQS--VE--------- 523 (711)
T ss_dssp HHHHHHSSCEEEE--EE-EGGGHHHHHHHHHH-H--H-H---HTCCCEEEEECCSGGGCTTCTTTCC--SS---------
T ss_pred HHHHHcCCCEEEE--EE-hHHHHHHHHHHHHH-h--h-h---cCCCEEEEEECCCcCcCCCCCccCC--hh---------
Confidence 999995 999999 85 99999888888854 1 1 1 1589999997733 446899955 23
Q ss_pred CcchhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCC---ccccCCC
Q psy4209 377 PRCVELDMKKQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTK---FRAYLPD 453 (856)
Q Consensus 377 ~~~~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~---f~~~i~~ 453 (856)
+.+++.++|||+|+.|++|.+++++|+.++. .++|++|..++.-+.. + +... +.+++|+
T Consensus 524 ------d~a~lr~iPnl~V~~Pad~~E~~~~l~~Ai~--~~~Pv~ir~~r~~~p~---------~-~~~~~~~~~i~~G~ 585 (711)
T 3uk1_A 524 ------HVASLRLIPNLDVWRPADTVETAVAWTYAVA--HQHPSCLIFSRQNLAF---------N-ARTDAQLANVEKGG 585 (711)
T ss_dssp ------HHHHHHTSTTCEEECCSSHHHHHHHHHHHHH--SSSCEEEECCSSEECC---------C-CCCHHHHHHGGGSS
T ss_pred ------HHHHHhcCCCCEEEecCCHHHHHHHHHHHHh--cCCCEEEEeeCCCCCC---------C-CCccccccccCCCe
Confidence 2378899999999999999999999999996 4899999887643321 1 1121 5566776
Q ss_pred cccccC--C----CCceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHH--HHHHHhcCCCCceEEEEecC
Q psy4209 454 TMADRN--K----DKVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRA--FINDVSSYKNVKQVCWCQSE 525 (856)
Q Consensus 454 a~~~~~--~----~~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~--i~~sv~kt~~~~~~v~vqEe 525 (856)
. +.++ + .|| +||+||.+|+.+|+||+++...|++++||++++|.|||.++ +.++|.++++ .+++.|+
T Consensus 586 ~-vl~~~~G~~~~~dv-tiia~G~~v~~al~Aa~~L~~~GI~~~Vid~~si~plD~~~~~~~~sv~~~~~---~~V~vE~ 660 (711)
T 3uk1_A 586 Y-VLRDWDEEIVARKI-ILIATGSEVELAMKAVEPLAQQGIAARVVSMPSSDVFDRQDAEYRERVLPHGV---RRVAIEA 660 (711)
T ss_dssp E-EEECCCSSCCSEEE-EEEECTTHHHHHHHHHHHHHHTTEEEEEEECSCHHHHHTSCHHHHHHHSCTTS---CEEEECS
T ss_pred E-EEEecCCCCCCCCE-EEEEecHHHHHHHHHHHHHHHcCCCeEEEecCcCCccchhHHHHHHHhhccCC---eEEEEeC
Confidence 4 3343 4 467 99999999999999998865556999999999999999987 7899999987 4666777
Q ss_pred CCCCCcHHHH
Q psy4209 526 PENFGFWKYV 535 (856)
Q Consensus 526 ~~~~G~~~~i 535 (856)
....|++.++
T Consensus 661 ~~~~g~~~~~ 670 (711)
T 3uk1_A 661 GVTDFWRKYV 670 (711)
T ss_dssp SCSGGGHHHH
T ss_pred CccccHHHHh
Confidence 7777754444
No 20
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=100.00 E-value=1.2e-34 Score=344.51 Aligned_cols=416 Identities=12% Similarity=0.100 Sum_probs=270.6
Q ss_pred cCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEE-EEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCCC
Q psy4209 9 THGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVF-HVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRHG 87 (856)
Q Consensus 9 ~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~-~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~G 87 (856)
.+=+|+||.||+|+++++..... ...+.+++++||++++ .|||+|+++++.|.+.|.+ ..++|+||++.|+|-+|
T Consensus 177 L~~livi~dnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~A~~---~~~~P~lI~~~T~kg~G 252 (663)
T 3kom_A 177 LNKLVAFWDDNNISIDGDTKGWF-SDNTPERFRAYGWHVIENVDGHDFVAIEKAINEAHS---QQQKPTLICCKTVIGFG 252 (663)
T ss_dssp CTTEEEEEEECC-----CGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHH---CSSSCEEEEEECCTTTT
T ss_pred CCeEEEEEECCCcccccchhhhc-chhHHHHHHHCCCeEEEEEcCCCHHHHHHHHHHHHh---cCCCCEEEEEecccccc
Confidence 34589999999999999876654 4568899999999999 9999999999988776543 16899999999999999
Q ss_pred CCCC-CCCCC----CCHHHHHHHHhc-----CCHHHHHHHHHHHcCCCCHHHHHHHHH-----HHHHHHHHHHHHHhhcC
Q psy4209 88 HNEG-DDPSF----TQPLMYEKIKQT-----KPLFEKYTQKLLQEKVITEDMVTLEVQ-----AYQQKLESEYEKSKEAT 152 (856)
Q Consensus 88 Hse~-D~~~y----r~~~e~~~~~~~-----dpi~~~~~~~Li~~G~~teeel~~i~~-----~~~~~v~~a~~~A~~~~ 152 (856)
|+.. +...+ -.+++++..++. +|. .+.++..+.+++ ...+..++.+...++.
T Consensus 253 ~~~~e~~~~~Hg~~l~~e~~~~~~~~l~~~~~pf------------~~~~~~~~~~~~~~~g~~~~~~w~~~~~~~~~~- 319 (663)
T 3kom_A 253 SPEKAGTASVHGSPLSDQERASAAKELNWDYQAF------------EIPQDVYKYWDAREKGQALEANWQGQRNLFKDS- 319 (663)
T ss_dssp CTTTTTCSSTTSSCCCHHHHHHHHHHTTCCCCTT------------CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHTTS-
T ss_pred cCCCCCCccccCCCCCHHHHHHHHHHcCCCCCCc------------cCChhHHHHHHHHhhcchhhHHHHHHHHHhhcc-
Confidence 9853 33322 246666654432 221 011211111111 1112222222221111
Q ss_pred CCCCCCCCcCCcCCCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHhhh-cchhhHHHHHH
Q psy4209 153 RFDSAPWIDVPWEGFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRVLNQRRKMIEE-NSLDWAMAEAL 231 (856)
Q Consensus 153 ~p~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~l~~r~~~~~~-~~idw~~aE~l 231 (856)
| .. +.+..... ..+| +++. ..+.+.+. ++.+. ..+.--.|=..
T Consensus 320 -p-~~--------------------------~~~~~~~~--~~~p-~~~~--~~~~~~~~---~~~~~~~~~a~r~a~~~ 363 (663)
T 3kom_A 320 -P-KF--------------------------DEFERVLS--KELP-VGLE--SAINDYIA---SQLSNPVKVATRKASQM 363 (663)
T ss_dssp -T-TH--------------------------HHHHHHHH--TCCC-TTHH--HHHHHHHH---HHHHSCCCEEHHHHHHH
T ss_pred -h-HH--------------------------HHHHHHhc--cCCC-cchh--hhhhhhhh---hhhccCcchhHHHHHHH
Confidence 1 00 00110000 1122 2211 00000000 00000 01100011112
Q ss_pred HHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCC-EeecCcccc-cccCCcEEEccCcchHHHHHHHhhhccC-CC
Q psy4209 232 ALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGN-TYTPLHHIG-AEAGKFHVYNSILNEMAALSFEYGYSLV-DP 308 (856)
Q Consensus 232 a~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg-~~~~~~~L~-~~~g~~rV~nspLsE~~i~G~~~G~a~~-g~ 308 (856)
+...++...++|++.|+|++. +++ .|+.+++|. ++| +.|++|++|+|.+++|++.|+|+. |.
T Consensus 364 aL~~~~~~~p~vv~~~aDl~~--------------s~~~~~~~~~~f~~~~~-p~R~~d~GIaE~~~v~~a~GlA~~gG~ 428 (663)
T 3kom_A 364 VLEVLCKNMPEMFGGSADLTG--------------SNNTNWSGSVWLNNTQE-GANYLSYGVREFGMAAIMNGLSLYGGI 428 (663)
T ss_dssp HHHHHHHHCTTEEEEECCC----------------CCSCCCTTCCBTTTCST-TCCEEECCSCHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHhhCCCEEEEecccCC--------------CCCcccccccccccccC-CCCeEecCccHHHHHHHHHHHHHcCCC
Confidence 334566678889999999976 444 478899995 889 789999999999999999999999 99
Q ss_pred CcceeecccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCc-cC--CCCCccCCCCchhhhhhhcCCCCcchhhhhh
Q psy4209 309 NFLVIWEAQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPH-GI--EGQGPEHSSARPERFLELCSDSPRCVELDMK 385 (856)
Q Consensus 309 ~~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~-G~--~g~Gp~HSsar~Er~lql~~e~~~~~~~~~~ 385 (856)
+|++ ++ |.+|+..++++|.. ++ ..+.|+|+++.| |+ ...||+|.+ +| +.+
T Consensus 429 ~P~~--~t-f~~F~~~~~~~ir~-~a------~~~lpvv~~~t~~g~g~G~dG~THq~--~e---------------d~a 481 (663)
T 3kom_A 429 KPYG--GT-FLVFSDYSRNAIRM-SA------LMKQPVVHVMSHDSIGLGEDGPTHQP--IE---------------HVP 481 (663)
T ss_dssp EEEE--EE-EGGGHHHHHHHHHH-HH------HTTCCCEEEEECCSGGGCTTCTTTCC--SS---------------HHH
T ss_pred EEEE--Ee-hHHHHHHHHHHHHH-HH------hcCCCEEEEEeCCccccCCCCCCcCC--HH---------------HHH
Confidence 9999 87 99999888888843 11 126899999755 43 346899955 22 237
Q ss_pred hhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCC---ccccCCCcccccC--C
Q psy4209 386 KQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTK---FRAYLPDTMADRN--K 460 (856)
Q Consensus 386 ~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~---f~~~i~~a~~~~~--~ 460 (856)
++.++|||+|+.|+++.+++++|+.++.. .++|++|..++.-+. .+ +... +..++|. .+.++ +
T Consensus 482 ~lr~iPnl~V~~Pad~~e~~~~l~~A~~~-~~~Pv~ir~~r~~~p---------~~-~~~~~~~~~~~~G~-~vl~~~~g 549 (663)
T 3kom_A 482 SLRLIPNLSVWRPADTIETMIAWKEAVKS-KDTPSVMVLTRQNLM---------PV-VQTQHQVANIARGG-YLVKDNPD 549 (663)
T ss_dssp HHHTSTTCEEECCCSHHHHHHHHHHHHHC-SSCCEEEECCSSEEC---------CC-CCCHHHHHHHTTTC-EEEECCTT
T ss_pred HHhcCCCcEEEeeCCHHHHHHHHHHHHHh-CCCCEEEEccCccCC---------Cc-CccccchhcccCce-EEEEecCC
Confidence 78999999999999999999999999962 489999988753221 11 1111 2345553 34355 5
Q ss_pred CCceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHH--HHHHHhcCCCCceEEEEecCCCCCCcHHHH
Q psy4209 461 DKVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRA--FINDVSSYKNVKQVCWCQSEPENFGFWKYV 535 (856)
Q Consensus 461 ~~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~--i~~sv~kt~~~~~~v~vqEe~~~~G~~~~i 535 (856)
.|| +||+||.+|+.+|+||+++...|++++||++++|.|||.++ +.++|.++.+ .+++-|+...+|...++
T Consensus 550 ~dv-tiia~G~~v~~al~Aa~~L~~~Gi~~~Vi~~~si~p~D~~~~~~~~~vl~~~~---~~v~vE~~~~~g~~~~~ 622 (663)
T 3kom_A 550 AKL-TIVATGSEVELAVKVANEFEKKGIKLNVASIPCVEVFATQAHEYKKTVIKDDI---PAVFVEMAQPDMWYKYM 622 (663)
T ss_dssp CSC-EEEECTTHHHHHHHHHHHHHHTTCCCEEEECSCHHHHHTSCHHHHHHHSCTTS---CEEEECSSCCGGGGGGC
T ss_pred CCE-EEEEecHHHHHHHHHHHHHHhcCCCeEEEEcCcCCcccccHHHHHHHhcCCCC---eEEEEecCCcccHHHHh
Confidence 678 99999999999999998765556999999999999999988 7899988876 45666777777755443
No 21
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=100.00 E-value=5.9e-35 Score=348.03 Aligned_cols=406 Identities=12% Similarity=0.090 Sum_probs=276.9
Q ss_pred ccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEEEE-eCCCHHHHHHHHHHHHHHHHc-cCCcEEEEEeeecC
Q psy4209 8 NTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVFHV-NADEPEVVVSIMKLLARYRQT-FKRDAFIDIIGYRR 85 (856)
Q Consensus 8 ~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~~V-DG~D~~aV~~a~~~Av~~~R~-g~gPvlIe~~tYR~ 85 (856)
..+=+|+|+.||+|+++++..... ...+.+++++||++++.| ||+|++++..|.+.| ++ .++|+||++.|+|-
T Consensus 200 ~L~~livI~dnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~v~DG~d~~~l~~Al~~a----~~~~~~P~lI~v~T~kG 274 (690)
T 3m49_A 200 QLGRLVVLYDSNDISLDGDLNRSF-SESVEDRYKAYGWQVIRVEDGNDIEAIAKAIEEA----KADEKRPTLIEVRTTIG 274 (690)
T ss_dssp TCTTEEEEEEECSBCSSSBGGGTC-CCCHHHHHHHHTCEEEEESCTTCHHHHHHHHHHH----HHCCSSCEEEEEECCTT
T ss_pred CCCeEEEEEECCCeecccchhhcc-chhHHHHHHHcCCcEEEEecCCCHHHHHHHHHHH----HhcCCCCEEEEEEeecc
Confidence 344589999999999999876554 456889999999999999 999999999876554 44 78999999999999
Q ss_pred CCCCC-CCCCCC----CCHHHHHHHHhc---C-C--------HHHHHHHHHHHcCCCCHHHHHHHHHHHHH---HHHHHH
Q psy4209 86 HGHNE-GDDPSF----TQPLMYEKIKQT---K-P--------LFEKYTQKLLQEKVITEDMVTLEVQAYQQ---KLESEY 145 (856)
Q Consensus 86 ~GHse-~D~~~y----r~~~e~~~~~~~---d-p--------i~~~~~~~Li~~G~~teeel~~i~~~~~~---~v~~a~ 145 (856)
+||+. .+...+ -.+++++..++. + + +...|++.+.++|-..++++.++-.++.. ++.+.+
T Consensus 275 ~G~~~~~~~~~~Hg~~~~~e~~~~~~~~l~~~~~~~F~v~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~a~~~ 354 (690)
T 3m49_A 275 FGSPNKSGKSASHGSPLGVEETKLTKEAYAWTAEQDFHVAEEVYENFRKTVQDVGETAQAEWNTMLGEYAQAYPELANEL 354 (690)
T ss_dssp TTCTTTTTSGGGTSSCCCHHHHHHHHHHTTCCCCSTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred cccCcccCcccccCCCCCHHHHHHHHHHhCCCCCCCCcCChhHHHHHHHHHhhhcchhhHHHHHHHHHHHHhCHHHHHHH
Confidence 99974 343322 145666665532 1 1 11233332333332233444444444433 233334
Q ss_pred HHHhhcCCCCCCCCCcCCcCCCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHhhhcchhh
Q psy4209 146 EKSKEATRFDSAPWIDVPWEGFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRVLNQRRKMIEENSLDW 225 (856)
Q Consensus 146 ~~A~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~l~~r~~~~~~~~idw 225 (856)
+...+.+.|. .+... +..+. ....+ ....+..
T Consensus 355 ~~~~~~~lp~--~~~~~-~~~~~--------~~~~~--------------------a~R~a~g----------------- 386 (690)
T 3m49_A 355 QAAMNGLLPE--GWEQN-LPTYE--------LGSKA--------------------ATRNSSG----------------- 386 (690)
T ss_dssp HHHHTTCCCT--TGGGG-CCCCC--------TTCEE--------------------EHHHHHH-----------------
T ss_pred HHHhcccCch--hhhhh-ccccc--------cccch--------------------HHHHHHH-----------------
Confidence 4433333331 11110 00000 00000 0111111
Q ss_pred HHHHHHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCEeecCcccccccCCcEEEccCcchHHHHHHHhhhcc
Q psy4209 226 AMAEALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYTPLHHIGAEAGKFHVYNSILNEMAALSFEYGYSL 305 (856)
Q Consensus 226 ~~aE~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L~~~~g~~rV~nspLsE~~i~G~~~G~a~ 305 (856)
-+...++.+.++|++.|+|++. .++..++.+++|.++|++.|++|++|+|.+++|++.|+|+
T Consensus 387 -----~~L~~~~~~~p~vv~~~aDl~~-------------s~~~~~~~~~~f~~~~~~~R~~d~GIaE~~mv~~A~GlA~ 448 (690)
T 3m49_A 387 -----AVINAIAESVPSFFGGSADLAG-------------SNKTYMNNEKDFTRDDYSGKNIWYGVREFAMGAAMNGIAL 448 (690)
T ss_dssp -----HHHHHHHHHCTTEEEEESSCHH-------------HHTCCCTTSCBCBTTBTTCCEEECCSCHHHHHHHHHHHHH
T ss_pred -----HHHHHHHhhCCCEEEEeCcccc-------------cCCccccccccchhhcCCCceEEcCchHHHHHHHHHHHHH
Confidence 1122344456778899999975 1344458899999999999999999999999999999999
Q ss_pred C-CCCcceeec--ccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCccC---CCCCccCCCCchhhhhhhcCCCCcc
Q psy4209 306 V-DPNFLVIWE--AQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPHGI---EGQGPEHSSARPERFLELCSDSPRC 379 (856)
Q Consensus 306 ~-g~~~l~~wE--~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~G~---~g~Gp~HSsar~Er~lql~~e~~~~ 379 (856)
. |.+|++ + ++|.||+..| |- .++ . .+.|++++++|+. ...||+|.+ +|
T Consensus 449 ~gG~~P~~--~tf~~Fs~f~~~a---ir-~~a---l---~~lpVv~v~~~~gigvG~dG~THq~--ie------------ 502 (690)
T 3m49_A 449 HGGLKTYG--GTFFVFSDYLRPA---IR-LAA---L---MQLPVTYVFTHDSIAVGEDGPTHEP--IE------------ 502 (690)
T ss_dssp HSSCEEEE--EEEGGGGGGGHHH---HH-HHH---H---HTCCCEEEEECCSGGGCTTCGGGCC--SS------------
T ss_pred cCCCEEEE--EecHHHHHHHHHH---HH-HHH---h---cCCCcEEEEECCCcCCCCCCCccCC--HH------------
Confidence 9 899999 8 8999997665 32 111 1 1589999999854 336899966 22
Q ss_pred hhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCC----CccccCCCcc
Q psy4209 380 VELDMKKQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDT----KFRAYLPDTM 455 (856)
Q Consensus 380 ~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~----~f~~~i~~a~ 455 (856)
+.+++.++|||+|+.|++|.+++++|+.++.. .++|++|..|+.-+.. + +.+ .+..++|+ .
T Consensus 503 ---d~a~lr~iPnl~V~~Pad~~E~~~~l~~Ai~~-~~~Pv~ir~~R~~~p~---------~-~~~~~~~~~~~~~G~-~ 567 (690)
T 3m49_A 503 ---QLAALRAMPNVSVIRPADGNESVAAWRLALES-TNKPTALVLTRQDLPT---------L-EGAKDDTYEKVAKGA-Y 567 (690)
T ss_dssp ---HHHHHHTSTTCEEECCSSHHHHHHHHHHHHHC-SSSCEEEECCSSEEEC---------C-HHHHTTHHHHHHTSC-E
T ss_pred ---HHHHHhcCCCCEEEeeCCHHHHHHHHHHHHHc-CCCCEEEEeecccCCC---------C-CccccccccccCCCe-E
Confidence 23778999999999999999999999999963 3689999988653321 1 111 14456665 4
Q ss_pred cccCCC----CceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCH--HHHHHHHh--cCCCCceEEEEecCCC
Q psy4209 456 ADRNKD----KVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPY--RAFINDVS--SYKNVKQVCWCQSEPE 527 (856)
Q Consensus 456 ~~~~~~----~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~--~~i~~sv~--kt~~~~~~v~vqEe~~ 527 (856)
+.++++ || +||+||.+|+.+|+||+++...|++++||++++|.|||. ++++++|. ++++ +|.|+ |..
T Consensus 568 vlr~g~~g~~dv-tiia~G~~v~~Al~Aa~~L~~~GI~~~Vid~~~i~p~D~~d~~~~~~v~~~~~~~---~v~vE-e~~ 642 (690)
T 3m49_A 568 VVSASKKETADV-ILLATGSEVSLAVEAQKALAVDGVDASVVSMPSMDRFEAQTAEYKESVLPKAVTK---RFAIE-MGA 642 (690)
T ss_dssp EEECCSSSSCSE-EEEECTTHHHHHHHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCC---EEEEC-SSC
T ss_pred EEEecCCCCCCE-EEEEechHHHHHHHHHHHHHhcCCCeEEEecccCCcCccccHHHHHHHhhccCCe---EEEEE-CCc
Confidence 445553 77 999999999999999988655569999999999999997 78888886 3555 66665 555
Q ss_pred CCC
Q psy4209 528 NFG 530 (856)
Q Consensus 528 ~~G 530 (856)
..|
T Consensus 643 ~~G 645 (690)
T 3m49_A 643 TFG 645 (690)
T ss_dssp CTT
T ss_pred hhh
Confidence 556
No 22
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=100.00 E-value=5e-34 Score=337.43 Aligned_cols=395 Identities=11% Similarity=0.053 Sum_probs=262.7
Q ss_pred ccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCCC
Q psy4209 8 NTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRHG 87 (856)
Q Consensus 8 ~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~G 87 (856)
..+=+|+|+.||+|+++++..... ...+.+++++||++++.|||+|++++..|.++| ++.++|+||++.|+|-+|
T Consensus 171 ~L~~livi~nnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~vdGhd~~~l~~al~~A----~~~~~P~lI~v~T~kG~G 245 (632)
T 3l84_A 171 KLDNFILIYDSNNISIEGDVGLAF-NENVKMRFEAQGFEVLSINGHDYEEINKALEQA----KKSTKPCLIIAKTTIAKG 245 (632)
T ss_dssp TCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEETTCHHHHHHHHHHH----HTCSSCEEEEEECCTTTT
T ss_pred CCCcEEEEEECCCcccccchhhhc-ChhHHHHHHHcCCeEEEEeeCCHHHHHHHHHHH----HhCCCCEEEEEeeEeeec
Confidence 344599999999999998876554 456889999999999999999999999887766 447899999999999999
Q ss_pred CCCC-CCCCC--C--CHHHHHHHHh------cCCHHHHHHHHHHHcCCCCHHHHHHHH------HHHHHHHHHHHHHHhh
Q psy4209 88 HNEG-DDPSF--T--QPLMYEKIKQ------TKPLFEKYTQKLLQEKVITEDMVTLEV------QAYQQKLESEYEKSKE 150 (856)
Q Consensus 88 Hse~-D~~~y--r--~~~e~~~~~~------~dpi~~~~~~~Li~~G~~teeel~~i~------~~~~~~v~~a~~~A~~ 150 (856)
|+.. +...+ . ++++++..++ .+|. .+.++..+.++ +...+..++.+..
T Consensus 246 ~~~~e~~~~~Hg~~l~~e~~~~~~~~l~~~~~~~f------------~v~~~~~~~~~~~~~~g~~~~~~w~~~~~~--- 310 (632)
T 3l84_A 246 AGELEGSHKSHGAPLGEEVIKKAKEQAGFDPNISF------------HIPQASKIRFESAVELGDLEEAKWKDKLEK--- 310 (632)
T ss_dssp CGGGTTCGGGSSSCCCHHHHHHHHHHHTCCTTCCS------------CCCHHHHHHHHTHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCCCcccccCCCCCHHHHHHHHHHhCCCCCCCc------------cCChHHHHHHHHHHhhcchhHHHHHHHhhc---
Confidence 9753 32222 1 4566665442 1221 12222222222 1111222222222
Q ss_pred cCCCCCCC-CCcCCcCCCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHhhhcchhhHHHH
Q psy4209 151 ATRFDSAP-WIDVPWEGFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRVLNQRRKMIEENSLDWAMAE 229 (856)
Q Consensus 151 ~~~p~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~l~~r~~~~~~~~idw~~aE 229 (856)
.+.|+... ++...|.... +. . .....+. .... ....|.
T Consensus 311 ~~~p~~~~~~~p~~~~~~~-~~-~--~~~~~~a--~r~a--------------~~~~l~--------------------- 349 (632)
T 3l84_A 311 SAKKELLERLLNPDFNKIA-YP-D--FKGKDLA--TRDS--------------NGEILN--------------------- 349 (632)
T ss_dssp SSCHHHHHHHHSCCSTTCC-CC-C--CTTCCBC--HHHH--------------HHHHHH---------------------
T ss_pred ccCchhhhhhCccchhhhc-ch-h--ccccchH--HHHH--------------HHHHHH---------------------
Confidence 11111000 0000111110 00 0 0000000 0000 111111
Q ss_pred HHHHhhhhccCCeEEEeeccCCCCcccccceeeeecCCCCEeecCcccccccCCcEEEccCcchHHHHHHHhhhccC-CC
Q psy4209 230 ALALGTLLDSGHHIRLIGQDSKRGTFSHRHAVYFDQATGNTYTPLHHIGAEAGKFHVYNSILNEMAALSFEYGYSLV-DP 308 (856)
Q Consensus 230 ~la~~sll~eg~~V~l~GeDv~~gtf~~Rh~v~~d~~~gg~~~~~~~L~~~~g~~rV~nspLsE~~i~G~~~G~a~~-g~ 308 (856)
.|.....++++.+.|++. +++++ -...++||+.|++|++|+|.+++|++.|+|+. |.
T Consensus 350 -----~l~~~~p~~v~~~aDl~~--------------s~~~~---~~~~~~f~p~R~~d~GIaE~~~v~~a~GlA~~gG~ 407 (632)
T 3l84_A 350 -----VLAKNLEGFLGGSADLGP--------------SNKTE---LHSMGDFVEGKNIHFGIREHAMAAINNAFARYGIF 407 (632)
T ss_dssp -----HHHHHCTTEEEEESSCHH--------------HHTCC---CTTSCBTTTSSEEECCSCHHHHHHHHHHHHHHSSC
T ss_pred -----HHHhhCCCEEEEecccCC--------------ccCcc---hhcccccCCCCeEEeCccHHHHHHHHHHHHHcCCC
Confidence 223345567799999864 33332 12346788999999999999999999999999 99
Q ss_pred CcceeecccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCc-cC--CCCCccCCCCchhhhhhhcCCCCcchhhhhh
Q psy4209 309 NFLVIWEAQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPH-GI--EGQGPEHSSARPERFLELCSDSPRCVELDMK 385 (856)
Q Consensus 309 ~~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~-G~--~g~Gp~HSsar~Er~lql~~e~~~~~~~~~~ 385 (856)
+|++ ++ |.+|+..|++||-. .+ . .+.|+|+++.| |+ ...||+|.+ +| +.+
T Consensus 408 ~P~~--~~-f~~F~~~~~~~ir~-~a---~---~~~pv~~~~t~~g~g~G~dG~THq~--~e---------------d~a 460 (632)
T 3l84_A 408 LPFS--AT-FFIFSEYLKPAARI-AA---L---MKIKHFFIFTHDSIGVGEDGPTHQP--IE---------------QLS 460 (632)
T ss_dssp EEEE--EE-EGGGHHHHHHHHHH-HH---H---HTCCCEEEEECCSGGGCTTCGGGSC--SS---------------HHH
T ss_pred EEEE--Ee-cHHHHHHHHHHHHH-Hh---c---cCCCEEEEEECCCcCCCCCCCCCCC--Hh---------------HHH
Confidence 9999 87 99999999988843 11 1 25899999865 44 336899965 22 237
Q ss_pred hhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCCCcccccccCCCccccCCCc-ccccC--CCC
Q psy4209 386 KQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVRSTFEDLSLDTKFRAYLPDT-MADRN--KDK 462 (856)
Q Consensus 386 ~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~s~~~e~~~~~~f~~~i~~a-~~~~~--~~~ 462 (856)
++.++|||+|+.|++|.+++++|+.++. .++|++|..|+..+ .+ ....+..+++++ .+.++ +.|
T Consensus 461 ~lr~iP~l~V~~P~d~~e~~~~l~~A~~--~~~Pv~ir~~r~~~-~~----------~~~~~~~~~~~g~~vl~~~~g~d 527 (632)
T 3l84_A 461 TFRAMPNFLTFRPADGVENVKAWQIALN--ADIPSAFVLSRQKL-KA----------LNEPVFGDVKNGAYLLKESKEAK 527 (632)
T ss_dssp HHHHSSSCEEECCSSHHHHHHHHHHHHH--CSSCEEEECCSSCB-CC----------CCCCSBCCGGGSSEEEECCTTCS
T ss_pred HHhcCCCCEEEecCCHHHHHHHHHHHHh--CCCCEEEEEcCCCC-CC----------CccccccccccccEEEEecCCCC
Confidence 7899999999999999999999999996 58999999886543 11 111233456665 45455 677
Q ss_pred ceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHH--HHHHHhcCCCCceEEEEecCCCCCCc
Q psy4209 463 VEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRA--FINDVSSYKNVKQVCWCQSEPENFGF 531 (856)
Q Consensus 463 v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~--i~~sv~kt~~~~~~v~vqEe~~~~G~ 531 (856)
| |||+||.+|+.+|+||+++...|++++|||+++|.|||.++ ++++|.+ ++ +|.|+ |....|.
T Consensus 528 v-tiia~G~~v~~al~Aa~~L~~~Gi~~~Vi~~~~i~PlD~~~~~~~~sv~~-~~---vv~vE-~~~~~g~ 592 (632)
T 3l84_A 528 F-TLLASGSEVWLCLESANELEKQGFACNVVSMPCFELFEKQDKAYQERLLK-GE---VIGVE-AAHSNEL 592 (632)
T ss_dssp E-EEEECGGGHHHHHHHHHHHHHTTCCEEEEECSBHHHHHTSCHHHHHHHCC-SE---EEEEC-SSCCGGG
T ss_pred E-EEEEechHHHHHHHHHHHHHhcCCCeEEEecCcCCCcchhHHHHHHHhcC-CC---EEEEe-CChhhhH
Confidence 8 99999999999999998865556999999999999999975 8999988 44 66665 4545554
No 23
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=99.97 E-value=7e-31 Score=292.25 Aligned_cols=155 Identities=14% Similarity=0.133 Sum_probs=141.5
Q ss_pred cEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCCCCCC
Q psy4209 11 GTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRHGHNE 90 (856)
Q Consensus 11 GvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~GHse 90 (856)
++||||+||+|||+|+...+.....+.. ++||+|+++|||+|+++|+.|+++|++++|+++||+|||++|||++|||+
T Consensus 192 pvi~vv~NN~~g~~t~~~~~~~~~~~~~--ra~g~p~~~VdG~D~~av~~a~~~A~~~~r~~~gP~lIe~~t~R~~gHs~ 269 (365)
T 2ozl_A 192 PCIFICENNRYGMGTSVERAAASTDYYK--RGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHEM 269 (365)
T ss_dssp CEEEEEEECSEETTEEHHHHCSCCCGGG--TTTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECCCSSCSST
T ss_pred CEEEEEECCCcccCCCcccccCCCCHHH--HhCCCCEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeecCCCCCC
Confidence 5999999999999997554443333443 68999999999999999999999999999999999999999999999999
Q ss_pred CCCC-CCCCHHHHHHHHh-cCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCcCCcCCCC
Q psy4209 91 GDDP-SFTQPLMYEKIKQ-TKPLFEKYTQKLLQEKVITEDMVTLEVQAYQQKLESEYEKSKEATRFDSAPWIDVPWEGFE 168 (856)
Q Consensus 91 ~D~~-~yr~~~e~~~~~~-~dpi~~~~~~~Li~~G~~teeel~~i~~~~~~~v~~a~~~A~~~~~p~~~~~~~~~~~~~~ 168 (856)
+|++ +||+|+|++.|++ +||+ .+|+++|+++|++|++++++++++++++|++|+++|+++|.|++++++++||++..
T Consensus 270 ~D~~~~Yr~~~e~~~~~~~~dpi-~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~p~p~~~~~~~~vy~~~~ 348 (365)
T 2ozl_A 270 SDPGVSYRTREEIQEVRSKSDPI-MLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDP 348 (365)
T ss_dssp TCCSCSSSCHHHHHHHHHHHCHH-HHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCCCGGGTTCSSSSSCC
T ss_pred CCCCcccCCHHHHHHHHhCCCHH-HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhhhcCCCC
Confidence 9987 4999999999986 5776 99999999999999999999999999999999999999999999999999998643
No 24
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=99.97 E-value=5.6e-31 Score=293.59 Aligned_cols=155 Identities=16% Similarity=0.263 Sum_probs=144.6
Q ss_pred cEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCCCCC-
Q psy4209 11 GTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRHGHN- 89 (856)
Q Consensus 11 GvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~GHs- 89 (856)
.+||||+||+||++|+...+++..+++++|++||+|+++|||+|+++|+.|+++|++++|+++||+|||++|||++|||
T Consensus 194 pvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~~r~~~gP~lIe~~t~r~~gHs~ 273 (368)
T 1w85_A 194 PAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTM 273 (368)
T ss_dssp CEEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCSSCSCS
T ss_pred CEEEEEEcCCccceeccccccCCCCHHHHHHHCCCCEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeeccCCCCC
Confidence 4999999999999999888888888999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC-CCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCcCCcCC
Q psy4209 90 EGDDPS-FTQPLMYEKIKQTKPLFEKYTQKLLQEKVITEDMVTLEVQAYQQKLESEYEKSKEATRFDSAPWIDVPWEG 166 (856)
Q Consensus 90 e~D~~~-yr~~~e~~~~~~~dpi~~~~~~~Li~~G~~teeel~~i~~~~~~~v~~a~~~A~~~~~p~~~~~~~~~~~~ 166 (856)
++|+|. ||+++|++.|+++||+ .+|+++|+++|++|++++++|+++++++|++|+++|+++|.|++++++++||++
T Consensus 274 ~~Ddp~~yr~~~e~~~~~~~dPi-~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~p~p~~~~~~~~vy~~ 350 (368)
T 1w85_A 274 SGDDPTRYRSKELENEWAKKDPL-VRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEE 350 (368)
T ss_dssp SCC------CHHHHHHHHTTCHH-HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHTSCCCCHHHHHHTSCSS
T ss_pred CCCCccccCCHHHHHHHhcCCHH-HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhhccCC
Confidence 999765 8999999999998887 999999999999999999999999999999999999999999999999999975
No 25
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=99.97 E-value=1.2e-30 Score=293.92 Aligned_cols=159 Identities=14% Similarity=0.194 Sum_probs=148.2
Q ss_pred CccCcEEEEEEcCCceeccCCCCcc-ccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecC
Q psy4209 7 YNTHGTIHIIINNQVGFTANPWETR-SSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRR 85 (856)
Q Consensus 7 y~~gGvIfvveNNqyg~sT~~~~~~-s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~ 85 (856)
|..+ +||||+||+||++|+...+. ....++++|++||+|+++|||+|+++|+.|+++|++++|+++||+|||++|||.
T Consensus 230 ~~lp-vi~Vv~NN~~gi~~~~~~~~~~~~d~a~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~ 308 (407)
T 1qs0_A 230 YRAP-VILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRA 308 (407)
T ss_dssp HTCC-EEEEEEECSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCC
T ss_pred HCcC-EEEEEECCCcceeeccccccCCCCCHHHHHHHcCCeEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeecc
Confidence 5666 99999999999999877665 456789999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCC-CCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhh------cCCCCCCC
Q psy4209 86 HGHNEGDDPS-FTQPLMYEKIKQTKPLFEKYTQKLLQEKVITEDMVTLEVQAYQQKLESEYEKSKE------ATRFDSAP 158 (856)
Q Consensus 86 ~GHse~D~~~-yr~~~e~~~~~~~dpi~~~~~~~Li~~G~~teeel~~i~~~~~~~v~~a~~~A~~------~~~p~~~~ 158 (856)
+|||++|++. ||+++|++.|+++||+ .+|+++|+++|++|++++++|+++++++|++|+++|++ +|.|++++
T Consensus 309 ~Ghs~~Dd~~~Yr~~~e~~~~~~~DPi-~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~~~~~p~p~~~~ 387 (407)
T 1qs0_A 309 GPHSTSDDPSKYRPADDWSHFPLGDPI-ARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAAS 387 (407)
T ss_dssp SCSSTTCCGGGTSCTTHHHHCTTCCHH-HHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCCCCSSG
T ss_pred CCcCCCCCccccCCHHHHHHHhcCCHH-HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCHHH
Confidence 9999999765 9999999999998887 99999999999999999999999999999999999998 57888899
Q ss_pred CCcCCcCCC
Q psy4209 159 WIDVPWEGF 167 (856)
Q Consensus 159 ~~~~~~~~~ 167 (856)
++++||+..
T Consensus 388 ~~~~vy~~~ 396 (407)
T 1qs0_A 388 MFEDVYKEM 396 (407)
T ss_dssp GGSSSSSSC
T ss_pred HHhhccCCC
Confidence 999999863
No 26
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=99.97 E-value=2e-30 Score=292.01 Aligned_cols=185 Identities=14% Similarity=0.093 Sum_probs=145.9
Q ss_pred CccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCC
Q psy4209 7 YNTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRH 86 (856)
Q Consensus 7 y~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~ 86 (856)
|.. ++||||+||+||++|+...+++..+++++|++||+|+++|||+|+++|+.|+++|++++|+++||+|||++|||++
T Consensus 211 ~~l-pvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~~P~lIe~~tyR~~ 289 (400)
T 2bfd_A 211 LEC-PIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIG 289 (400)
T ss_dssp TTC-CEEEEEEECSEETTEEGGGTCSSSTTGGGTGGGTCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC
T ss_pred HCc-CEEEEEECCceeeeecccccCCCCCHHHHHHHcCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeeeeC
Confidence 345 7999999999999999888888888999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC-CCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCcCCcC
Q psy4209 87 GHNEGDDPS-FTQPLMYEKIKQTKPLFEKYTQKLLQEKVITEDMVTLEVQAYQQKLESEYEKSKEATRFDSAPWIDVPWE 165 (856)
Q Consensus 87 GHse~D~~~-yr~~~e~~~~~~~dpi~~~~~~~Li~~G~~teeel~~i~~~~~~~v~~a~~~A~~~~~p~~~~~~~~~~~ 165 (856)
|||++|++. ||+++|++.|+++++++.+|+++|++.|+++++++++++++++++|++++++|++.|.|++++.++++|+
T Consensus 290 gHs~~D~~~~Yr~~~e~~~~~~~~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~vy~ 369 (400)
T 2bfd_A 290 HASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQ 369 (400)
T ss_dssp --CC-------------------CCHHHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHSCBCCGGGGSTTSSS
T ss_pred CCCCCCCCccCCCHHHHHHHHhcCCHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhc
Confidence 999999865 9999999999998644599999999999999999999999999999999999999998888888888887
Q ss_pred CCCCccccccCCCCCCCHHHHHHHHHHhCCCCCCccchh
Q psy4209 166 GFEKDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLH 204 (856)
Q Consensus 166 ~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h 204 (856)
.. +....++++.+...+...| ++|...
T Consensus 370 ~~-----------~~~l~~q~~~~~~~~~~~~-~~~~~~ 396 (400)
T 2bfd_A 370 EM-----------PAQLRKQQESLARHLQTYG-EHYPLD 396 (400)
T ss_dssp SC-----------CHHHHHHHHHHHHHHHHHG-GGSCGG
T ss_pred cC-----------CHHHHHHHHHHHHHHHhCC-CcCCcc
Confidence 53 1223456777777777777 777543
No 27
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=99.96 E-value=2.2e-29 Score=280.96 Aligned_cols=158 Identities=14% Similarity=0.146 Sum_probs=149.9
Q ss_pred CccCcEEEEEEcCCceeccCCCCccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCC
Q psy4209 7 YNTHGTIHIIINNQVGFTANPWETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRH 86 (856)
Q Consensus 7 y~~gGvIfvveNNqyg~sT~~~~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~ 86 (856)
|... +||||.||+||++|+...+++..+++++|++||+|+++|||+|+++|+.|++.|++++++++||+|||++|||.+
T Consensus 193 ~~lp-vi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~av~~a~~~A~~~a~~~~gP~lIe~~t~r~~ 271 (367)
T 1umd_A 193 QGAP-AVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYG 271 (367)
T ss_dssp TTCS-EEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECCCCS
T ss_pred hCcC-EEEEEecCCeeeccChhhccCCCCHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeecCC
Confidence 4555 999999999999998777777778999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC-CCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCcCCcC
Q psy4209 87 GHNEGDDPS-FTQPLMYEKIKQTKPLFEKYTQKLLQEKVITEDMVTLEVQAYQQKLESEYEKSKEATRFDSAPWIDVPWE 165 (856)
Q Consensus 87 GHse~D~~~-yr~~~e~~~~~~~dpi~~~~~~~Li~~G~~teeel~~i~~~~~~~v~~a~~~A~~~~~p~~~~~~~~~~~ 165 (856)
|||++|+|+ ||+++|++.|+++||+ .+|+++|+++|++|++++++|+++++++|++++++|+++|.|++++++++||+
T Consensus 272 Ghs~~D~~~~Yr~~~e~~~~~~~dPi-~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~vy~ 350 (367)
T 1umd_A 272 PHSSADDDSRYRPKEEVAFWRKKDPI-PRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVPPEWMFEDVFA 350 (367)
T ss_dssp CSSTTCCGGGTSCHHHHHHHHTTCHH-HHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCBCCGGGGGTTSSS
T ss_pred CCCCCCCccccCCHHHHHHHHcCCHH-HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhhhcC
Confidence 999999765 9999999999999887 99999999999999999999999999999999999999999999999999997
Q ss_pred C
Q psy4209 166 G 166 (856)
Q Consensus 166 ~ 166 (856)
+
T Consensus 351 ~ 351 (367)
T 1umd_A 351 E 351 (367)
T ss_dssp S
T ss_pred C
Confidence 5
No 28
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=99.96 E-value=4.2e-30 Score=313.62 Aligned_cols=180 Identities=24% Similarity=0.502 Sum_probs=83.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhCCCCcCHHHHHHHHhccc-CCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCc
Q psy4209 638 RDSFLNGTFANYLEVMYDQWLQNPNSVHPSWAKYFAEEAM-SAPSSIAIGNPTGQSSNGVGSSFPRREETPIHGEFVNPD 716 (856)
Q Consensus 638 ~~SfL~g~Na~YIEelYe~yl~DP~SVd~sWr~yF~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (856)
++|||+|.|+.|||+||++|++||+|||++|+.||+++.. +.+.. ..+.+....|........... ....
T Consensus 11 ~~~~~~~~~~~~~~~~y~~~~~~p~sv~~~w~~~f~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~ 81 (933)
T 2jgd_A 11 DSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPD--------QFHSQTREYFRRLAKDASRYS-STIS 81 (933)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhcccccccHHHHHHHHHHHhhCccccCHHHHHHHhcccccCCccc--------ccccchhhhhhhccccccccc-cccC
Confidence 4589999999999999999999999999999999998643 21100 000011000100000000000 0000
Q ss_pred cchhhhHhHHHHHHHHHHHHHccccccccCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCccCCCceeecCCCccccC
Q psy4209 717 ENINLSSEAAQLQNLLHVYRDSGHLMANVDPLGFSTPFGKIKTPDFKRVPTQIYKNFAPLLNFPDLNKSVTLPEDTKIGG 796 (856)
Q Consensus 717 ~~~~~~~~~~~v~~LI~AYR~~GHl~A~lDPL~~~~~~~~~~~~el~~~~~~~~~~~~~~lt~~DLd~~f~~~~~~~~g~ 796 (856)
......++.+|.+||+|||.|||+.|+||||++..+. ..++|+ +. .| +|+++|||++|.++ +..+|
T Consensus 82 -~~~~~~~~~~~~~li~~yr~~gh~~a~~dpl~~~~~~---~~~~l~---~~---~~--g~~~~d~~~~~~~~-~~~~~- 147 (933)
T 2jgd_A 82 -DPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQD---KVADLD---PS---FH--DLTEADFQETFNVG-SFASG- 147 (933)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHGGGGSCCCSSSCCCCC------CCS---SG---GG--GCCC-CTTSEEECT-TCC---
T ss_pred -cchhHHHHHHHHHHHHHHHHhCccccccCCCCCCCCC---CCCCCC---Hh---Hc--CCchhhccceeccC-ccccC-
Confidence 0011245889999999999999999999999984321 234553 22 23 48999999999874 21113
Q ss_pred CCCCCcHHHHHHHHHHHcCCceeeecccCCCHHHHHHHHHHhcCC
Q psy4209 797 DQSSLKISDFIERLESVYCGPVGVEITHIKNIRRRRWLKAEVEKP 841 (856)
Q Consensus 797 ~~~~~tL~eii~~L~~~YCG~IG~EfmHI~d~eer~WL~~riE~~ 841 (856)
...+||+||+++|+++|||+||+|||||.|+++|+||+++||+.
T Consensus 148 -~~~~~l~~~~~~l~~~yc~~ig~e~~~i~~~~~~~w~~~~~e~~ 191 (933)
T 2jgd_A 148 -KETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESG 191 (933)
T ss_dssp --CEEEHHHHHHHHHHHHHSSEEEECSSCCCHHHHHHHHHHHCC-
T ss_pred -cCcCcHHHHHHHHHHhccCCCcceeeecCCHHHhHHHHHHhhcc
Confidence 45689999999999999999999999999999999999999976
No 29
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=99.94 E-value=3.2e-27 Score=287.33 Aligned_cols=412 Identities=13% Similarity=0.072 Sum_probs=245.0
Q ss_pred CcEEEEEEcCCceeccCCCCc-cccchhhhhhhhcCCcEEEE--------------------------------------
Q psy4209 10 HGTIHIIINNQVGFTANPWET-RSSMYCTCVAKVIGAPVFHV-------------------------------------- 50 (856)
Q Consensus 10 gGvIfvveNNqyg~sT~~~~~-~s~~~~sdrAk~~gip~~~V-------------------------------------- 50 (856)
+-+||||.||+++++.+.... ....++..+.+++|..+++|
T Consensus 251 ~nli~Vvn~N~~si~~~v~~~~~~~~~l~~~~~~~G~~~~~v~~g~~~~~ll~~~~~~~l~~~~~~~~d~~~q~~~~~~g 330 (886)
T 2qtc_A 251 DNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDG 330 (886)
T ss_dssp TTEEEEEEECSBCSSSBSCTTSCHHHHHHHHHHHTTCEEEEECBCTTHHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCH
T ss_pred CcEEEEEECCCcccCCCccccccccHHHHHHHHhCCCCEEEEecchhHHHHHccCCchHHHHHHHhccchhhhhhhhccc
Confidence 458999999999999987764 33567899999999999998
Q ss_pred -------------------------------eCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCCCCC--CCCCC---
Q psy4209 51 -------------------------------NADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRHGHN--EGDDP--- 94 (856)
Q Consensus 51 -------------------------------DG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~GHs--e~D~~--- 94 (856)
||+|+.+|++|.+.|.+. .++|++|++.|++-+||+ +.++.
T Consensus 331 ~~~r~~~F~~~~~~~~l~~~~~d~~i~~l~~dGhD~~~l~~a~~~A~~~---~~~PtlI~~~T~KG~G~~~~~e~~~~~H 407 (886)
T 2qtc_A 331 AYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQET---KGKATVILAHTIKGYGMGDAAKGKNIAH 407 (886)
T ss_dssp HHHHHHTSTTSHHHHTTTTTCCHHHHHTCCBGGGCHHHHHHHHHHHHHC---CSSCEEEEEECCTTTTCTTCC-------
T ss_pred hHHHHhhcccchHHHHHHhhcChhhHhhcccCCCCHHHHHHHHHHHHHc---CCCCEEEEEeeeeccccchhhcCCcccc
Confidence 799999999999999874 358999999999999997 23332
Q ss_pred --CCCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCH----HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCcCCcCCCC
Q psy4209 95 --SFTQPLMYEKIKQTKPLFEKYTQKLLQEKVITE----DMVTLEVQAYQQKLESEYEKSKEATRFDSAPWIDVPWEGFE 168 (856)
Q Consensus 95 --~yr~~~e~~~~~~~dpi~~~~~~~Li~~G~~te----eel~~i~~~~~~~v~~a~~~A~~~~~p~~~~~~~~~~~~~~ 168 (856)
.+.+.++++.++++-.+ ..-.+.|.+.-...+ ++++.+.+ ... +.....|.....+.. ...
T Consensus 408 ~~~~l~~~~~~~~r~~~~~-~~~~e~~~~~~f~~~~~~~~~~~~~~~-------r~~--~l~g~~p~~~~~~~~---~~~ 474 (886)
T 2qtc_A 408 QVKKMNMDGVRHIRDRFNV-PVSDADIEKLPYITFPEGSEEHTYLHA-------QRQ--KLHGYLPSRQPNFTE---KLE 474 (886)
T ss_dssp ------CHHHHHHHHHTTC-SCCHHHHTTCCCCCCCTTSHHHHHHHH-------HHH--HTTSCSSCCCCSCCS---CCC
T ss_pred CCCCCCHHHHHHHHHHcCC-CCChhhhccccccCCccchHHHHHHHH-------HHH--HhcccCcchhhhhhh---ccc
Confidence 26677888888766443 110111111101000 11221111 100 122222221111100 000
Q ss_pred CccccccCCCCCCCHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHhhhcchhhHHHHHHHHhhhhccC---CeEEE
Q psy4209 169 KDTTLIQMPTTGCDIAKLQLLADLVSKPPAEPFKLHRSLQRVLNQRRKMIEENSLDWAMAEALALGTLLDSG---HHIRL 245 (856)
Q Consensus 169 ~~~~~~~~~~t~~~~~~l~~~~~~~~~~P~~~f~~h~~l~~~l~~r~~~~~~~~idw~~aE~la~~sll~eg---~~V~l 245 (856)
.|. +..+...+..-. ........+ .+ +...|+.+. .+|+.
T Consensus 475 ~p~--------------~~~~~~~~~~~~-~~~atr~af--------------------g~--~L~~l~~~~~~~~~iV~ 517 (886)
T 2qtc_A 475 LPS--------------LQDFGALLEEQS-KEISTTIAF--------------------VR--ALNVMLKNKSIKDRLVP 517 (886)
T ss_dssp CCC--------------GGGGHHHHSCCS-SCBCHHHHH--------------------HH--HHHHHTTCTTTTTTEEE
T ss_pred CCc--------------hhhhhhhccCCC-CcchHHHHH--------------------HH--HHHHHHhhcccCCcEEE
Confidence 000 000000000000 000011111 11 122344444 78888
Q ss_pred eeccCCC--Cc---ccccceeeeecCCCCEeec-Cccc----ccccCCcEEEccCcchHH-HH---HHHhhhccCC--CC
Q psy4209 246 IGQDSKR--GT---FSHRHAVYFDQATGNTYTP-LHHI----GAEAGKFHVYNSILNEMA-AL---SFEYGYSLVD--PN 309 (856)
Q Consensus 246 ~GeDv~~--gt---f~~Rh~v~~d~~~gg~~~~-~~~L----~~~~g~~rV~nspLsE~~-i~---G~~~G~a~~g--~~ 309 (856)
+.-|+.+ |+ | |=.-++. ..++.|.+ ..+. .+.| +.|++|++|+|.+ +. |++.|||+.| ++
T Consensus 518 i~pd~~~~~G~~dl~--~S~~i~~-~~~~~f~~~d~~~~~~~~e~~-~~R~~d~GIaE~~a~~~~~g~a~GlA~~G~~~~ 593 (886)
T 2qtc_A 518 IIADEARTFGMEGLF--RQIGIYS-PNGQQYTPQDREQVAYYKEDE-KGQILQEGINELGAGCSWLAAATSYSTNNLPMI 593 (886)
T ss_dssp EESSCSGGGTCHHHH--HHHCBBC-C-----------------CBT-TCCBEECCSCHHHHHHHHHHHHTHHHHTSCCCE
T ss_pred EcCccccccCccccc--ccccccc-cCCcccccccchhhhhhhhcC-CCceeeeccCchhhhhHHHHHHHHHHhcCCCce
Confidence 8888654 21 0 0000010 12344542 1111 1344 7899999999999 66 8999999999 89
Q ss_pred cceeecccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCc---cCCCCCccCCCCchhhhhhhcCCCCcchhhhhhh
Q psy4209 310 FLVIWEAQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPH---GIEGQGPEHSSARPERFLELCSDSPRCVELDMKK 386 (856)
Q Consensus 310 ~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~---G~~g~Gp~HSsar~Er~lql~~e~~~~~~~~~~~ 386 (856)
|+++.-.+|+ ..-|.|||.+.+. ++ ..++.+-.-+ +..+.|++|++ +|- .++
T Consensus 594 P~~~~ys~F~--~qRa~Dqi~~~~d---~~---~~~v~l~~~~~~~~~g~dG~tHq~--~~~---------------~a~ 648 (886)
T 2qtc_A 594 PFYIYYSMFG--FQRIGDLCWAAGD---QQ---ARGFLIGGTSGRTTLNGEGLQHED--GHS---------------HIQ 648 (886)
T ss_dssp EEEEEEGGGS--HHHHHHHHHHHHH---TT---CCCEEEEESCSTTTSTTTCTTTCC--SCH---------------HHH
T ss_pred EEEEEehHHH--HHHHHHHHHHHHH---Hh---cCCEEEEEecCcccCCCCCCccCC--cch---------------HHH
Confidence 9974434443 4467777766542 22 1233332212 33577999987 231 257
Q ss_pred hcCCCCeEEEecCCcchHHHHHHHhhhCCCCCc----EEEEecccc--cCCCCCCCcccccccCCCccccCCCcccccCC
Q psy4209 387 QLFDANWFVLYPSTPSTLFHALRRQLLLPFRRP----LVVLTPKAL--LRHPQVRSTFEDLSLDTKFRAYLPDTMADRNK 460 (856)
Q Consensus 387 ~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P----~i~~e~K~L--~r~~~~~s~~~e~~~~~~f~~~i~~a~~~~~~ 460 (856)
+.++|||+|+.|+++.++.++|+.++++ .+.| ++|..++.. +.++ ++ |.+....+++++.+.+++
T Consensus 649 lr~iPnl~V~~Pada~E~~~~l~~al~~-~~gP~~e~v~i~~~r~~~~~~~p-------~~-~~~~~~~~~gga~vlr~g 719 (886)
T 2qtc_A 649 SLTIPNCISYDPAYAYEVAVIMHDGLER-MYGEKQENVYYYITTLNENYHMP-------AM-PEGAEEGIRKGIYKLETI 719 (886)
T ss_dssp HTTSTTEEEECCSSHHHHHHHHHHHHHH-HHSTTCCCCEEEEECCSCCBCCC-------CC-CTTCHHHHHHTCEEEEEE
T ss_pred HhhCCCCEEEecCCHHHHHHHHHHHHHh-cCCCCCceEEEEEeCCccccCCC-------CC-CcchhhhccCceEEEEec
Confidence 7899999999999999999999999964 2348 888888643 3322 22 333222337777765554
Q ss_pred ----CCceEEEEcCCcHHHHHHHHHHHcCC-CCcEEEEEecccCCCCHHHHHHHHhcCCC
Q psy4209 461 ----DKVEKYILCSGKIYYDLIEARDAANL-TEQIAIARLEQISPFPYRAFINDVSSYKN 515 (856)
Q Consensus 461 ----~~v~tvv~~~g~v~~~l~~a~~~~~~-~~~vevi~l~~L~P~~~~~i~~sv~kt~~ 515 (856)
.+| +||+||.+|+.+|+||+.+... |++++||+++++.|||.++|. ++||++
T Consensus 720 ~~~~~dV-tLia~G~~v~~al~AAe~L~~e~GI~a~Vvd~~sl~pLD~e~i~--~~kt~r 776 (886)
T 2qtc_A 720 EGSKGKV-QLLGSGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQD--CERWNM 776 (886)
T ss_dssp CCSSEEE-EEEECGGGHHHHHHHHHHHHHHHCEEEEEEECSCHHHHHHHHHH--HHHHHH
T ss_pred CCCCCCE-EEEeCcHHHHHHHHHHHHHhhhhCCceEEEECCcCcccchHHHH--Hhhhcc
Confidence 567 9999999999999999876443 599999999999999999998 888876
No 30
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=99.84 E-value=4.6e-21 Score=238.31 Aligned_cols=157 Identities=27% Similarity=0.496 Sum_probs=114.0
Q ss_pred CCCCCCCHHHHHHHHHHHhhCCCCcCHHHHHHHHhcccCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCccch
Q psy4209 640 SFLNGTFANYLEVMYDQWLQNPNSVHPSWAKYFAEEAMSAPSSIAIGNPTGQSSNGVGSSFPRREETPIHGEFVNPDENI 719 (856)
Q Consensus 640 SfL~g~Na~YIEelYe~yl~DP~SVd~sWr~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (856)
..+.|.-++=.-+..+++++||+ +|+.||+++.. |. . +. .+.... ..
T Consensus 201 RviDGa~aa~FL~~lk~~Le~p~----~w~~~f~~~~~--~~------~------~~--~~~~~~----------~~--- 247 (1113)
T 2xt6_A 201 RIIQGAESGDFLRTIHQLLLDDD----FFDEIFRELGI--PY------E------PV--RWRTDN----------PD--- 247 (1113)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCHH----HHHHHHHHHTC--CS------C------CC--CCCCCC----------CS---
T ss_pred ceechHHHHHHHHHHHHHHhCcH----HHHHHHHhccC--CC------C------cc--cccccC----------cc---
Confidence 46777777655556788999987 89999998631 10 0 00 010000 00
Q ss_pred hhhHhHHHHHHHHHHHHHccccccccCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCccCCCceeecCCCccccCCCC
Q psy4209 720 NLSSEAAQLQNLLHVYRDSGHLMANVDPLGFSTPFGKIKTPDFKRVPTQIYKNFAPLLNFPDLNKSVTLPEDTKIGGDQS 799 (856)
Q Consensus 720 ~~~~~~~~v~~LI~AYR~~GHl~A~lDPL~~~~~~~~~~~~el~~~~~~~~~~~~~~lt~~DLd~~f~~~~~~~~g~~~~ 799 (856)
....++.+|++||+|||.|||+.|+||||++.. ......++|+ +. .| +|+++|||++|.++ ...| ..
T Consensus 248 ~~~~~~~~~~~li~~yr~~gh~~a~~dpl~~~~-~~~~~~~~l~---~~---~~--g~~~~d~~~~~~~~--~~~~--~~ 314 (1113)
T 2xt6_A 248 SIEDKNARVIELIAAYRNRGHLMADIDPLRLDN-TRFRSHPDLD---VN---SH--GLTLWDLDREFKVD--GFAG--VQ 314 (1113)
T ss_dssp CHHHHHHHHHHHHHHHHHHGGGSCCCCTTCCCG-GGGSCCTTTC---SG---GG--TCCGGGTTSEEEEC--STTS--SE
T ss_pred hhHHHHHHHHHHHHHHHHhCccccccCCCCCCc-CCCCCCCCcC---HH---Hc--CCChHHhcCccccC--cccC--cc
Confidence 012468899999999999999999999999832 0001234553 22 23 58999999999874 2233 45
Q ss_pred CCcHHHHHHHHHHHcCCceeeecccCCCHHHHHHHHHHhcCCC
Q psy4209 800 SLKISDFIERLESVYCGPVGVEITHIKNIRRRRWLKAEVEKPN 842 (856)
Q Consensus 800 ~~tL~eii~~L~~~YCG~IG~EfmHI~d~eer~WL~~riE~~~ 842 (856)
.+||+||+++|+++|||+||+|||||.|+++|+||+++||+..
T Consensus 315 ~~~l~~~~~~l~~~yc~~ig~e~~~i~~~~~~~w~~~~~e~~~ 357 (1113)
T 2xt6_A 315 RKKLRDILSVLRDAYCRHVGVEYTHILEPEQQRWIQERVETKH 357 (1113)
T ss_dssp EEEHHHHHHHHHHHHSSSEEEECTTCSCHHHHHHHHHHHHSCC
T ss_pred cCCHHHHHHHHHHhccCCCCcceeccCCHHHhHHHHHHhhcCC
Confidence 6899999999999999999999999999999999999999765
No 31
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=99.79 E-value=7.4e-20 Score=222.51 Aligned_cols=104 Identities=33% Similarity=0.611 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHHHHccccccccCCCCCCCC--CCCCCCCCCCCCCcccccccCCCCCccCCCceeecCCCccccCCCCCC
Q psy4209 724 EAAQLQNLLHVYRDSGHLMANVDPLGFSTP--FGKIKTPDFKRVPTQIYKNFAPLLNFPDLNKSVTLPEDTKIGGDQSSL 801 (856)
Q Consensus 724 ~~~~v~~LI~AYR~~GHl~A~lDPL~~~~~--~~~~~~~el~~~~~~~~~~~~~~lt~~DLd~~f~~~~~~~~g~~~~~~ 801 (856)
++.+|.+||+|||.|||+.|+||||++... . ..++|+ +. .| +|+++|||++|.++ ...| ...+
T Consensus 7 ~~~~~~~li~~yr~~gh~~a~~dpl~~~~~~~~---~~~~l~---~~---~~--g~~~~d~~~~~~~~--~~~~--~~~~ 71 (868)
T 2yic_A 7 KNARVIELIAAYRNRGHLMADIDPLRLDNTRFR---SHPDLD---VN---SH--GLTLWDLDREFKVD--GFAG--VQRK 71 (868)
T ss_dssp CHHHHHHHHHHHHHHGGGTSCCCTTCCCTHHHH---C-------------------CCSTTSSBC------------CCC
T ss_pred HHHHHHHHHHHHHHhCccceecCCCCCCCCCCC---CCCccC---HH---hc--CCChHHhCCeeccC--CccC--cCcC
Confidence 478999999999999999999999998320 1 234443 22 23 58999999999874 2233 4568
Q ss_pred cHHHHHHHHHHHcCCceeeecccCCCHHHHHHHHHHhcCCC
Q psy4209 802 KISDFIERLESVYCGPVGVEITHIKNIRRRRWLKAEVEKPN 842 (856)
Q Consensus 802 tL~eii~~L~~~YCG~IG~EfmHI~d~eer~WL~~riE~~~ 842 (856)
||+||+++|+++|||+||+|||||.|+++|+||+++||+..
T Consensus 72 ~l~~~~~~l~~~yc~~ig~e~~~i~~~~~~~w~~~~~e~~~ 112 (868)
T 2yic_A 72 KLRDILSVLRDAYCRHVGVEYTHILEPEQQRWIQERVETKH 112 (868)
T ss_dssp BHHHHHHHHHHHHSSSEEEECTTCSCHHHHHHHHHHHSSCC
T ss_pred CHHHHHHHHHHhhcCCCCcceeccCChHHhHHHHHHhccCC
Confidence 99999999999999999999999999999999999999765
No 32
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=99.76 E-value=1.7e-19 Score=203.05 Aligned_cols=237 Identities=12% Similarity=0.073 Sum_probs=84.9
Q ss_pred ccCCcEEEccCcchHHHHHHHhhhccCCCCcceeecccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCccC-CC--
Q psy4209 280 EAGKFHVYNSILNEMAALSFEYGYSLVDPNFLVIWEAQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPHGI-EG-- 356 (856)
Q Consensus 280 ~~g~~rV~nspLsE~~i~G~~~G~a~~g~~~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~G~-~g-- 356 (856)
++| .+++.+. ||.+.+|+++|+|+.|.|+++ +.++.+|.+ ++++|.+.. +...|+|++.+.+. .+
T Consensus 62 ~~g-~~~i~~e-~E~~a~~~a~Gaa~aG~r~~~--~ts~~G~~~-~~d~l~~aa-------~~~~P~Vi~~~~~~~~~~g 129 (395)
T 1yd7_A 62 LVD-GVVIQME-DEIASIAAAIGASWAGAKAMT--ATSGPGFSL-MQENIGYAV-------MTETPVVIVDVQRSGPSTG 129 (395)
T ss_dssp GGT-CEEEECS-CHHHHHHHHHHHHHTTCCEEE--EEETTHHHH-HTTTCC-----------CCCCEEEEEEC-------
T ss_pred hcC-cEEEEeC-CHHHHHHHHHHHHHhCCcEEE--EeCchHHHH-HHHHHHHHH-------hcCCCEEEEEeeCCCCCCC
Confidence 344 5788877 999999999999999999777 999998876 777775421 44789999999855 32
Q ss_pred --CCccCCCCchhhhhhhcCCCCcchhhhhhhhcCCC--CeEEEecCCcchHHHHHHHhhh--CCCCCcEEEEecccccC
Q psy4209 357 --QGPEHSSARPERFLELCSDSPRCVELDMKKQLFDA--NWFVLYPSTPSTLFHALRRQLL--LPFRRPLVVLTPKALLR 430 (856)
Q Consensus 357 --~Gp~HSsar~Er~lql~~e~~~~~~~~~~~~~~~~--gl~V~~pstpad~~~lLr~~i~--~~~~~P~i~~e~K~L~r 430 (856)
..++||+. ++ .++++.+ |+.|+.|+||++++++++.++. .+++.||+|++++.++.
T Consensus 130 ~~~~~~~sd~-~~-----------------~~~~~~g~~g~~vl~p~~~qea~~l~~~A~~lA~~~~~PVi~~~~~~l~h 191 (395)
T 1yd7_A 130 QPTLPAQGDI-MQ-----------------AIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLSEKYRTPVILLTDAEVGH 191 (395)
T ss_dssp -------------------------------------CCCCEEECCCSHHHHHHHHHHHHHHHHHHTSEEEEEECHHHHH
T ss_pred CCcccchhHH-HH-----------------HHhccCCCcceEEEeCCCHHHHHHHHHHHHHHHHHHCCCEEEEcchhHhC
Confidence 33567772 22 4556755 9999999999999999999983 22479999999998765
Q ss_pred CCCCC--Ccccccc---------cC---CCccc--cCC--------Cc--------------------------------
Q psy4209 431 HPQVR--STFEDLS---------LD---TKFRA--YLP--------DT-------------------------------- 454 (856)
Q Consensus 431 ~~~~~--s~~~e~~---------~~---~~f~~--~i~--------~a-------------------------------- 454 (856)
..... ...+++. |. ..|.. +.+ .+
T Consensus 192 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~h~e~g~~~~~~~~~~~~~~~~~~ 271 (395)
T 1yd7_A 192 MRERVYIPNPDEIEIINRKLPRNEEEAKLPFGDPHGDGVPPMPIFGKGYRTYVTGLTHDEKGRPRTVDREVHERLIKRIV 271 (395)
T ss_dssp CEEEEEECCGGGSCCCCCC-------------------------------------------------------------
T ss_pred eeceecCCChHHhhhhcccccCCCcccccCcccCCCCCCCCCccCCCCceeEecccccccccCcccCCHHHHHHHHHHHH
Confidence 53210 0001110 00 11221 111 10
Q ss_pred --------------ccccCCCCceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHHHHHHHhcCCCCceEE
Q psy4209 455 --------------MADRNKDKVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRAFINDVSSYKNVKQVC 520 (856)
Q Consensus 455 --------------~~~~~~~~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~i~~sv~kt~~~~~~v 520 (856)
....++.++ +||+||.++..++++++++...|+++.||++++++|||.++|.++++++++ ++
T Consensus 272 ~k~~~~~~~~~~~~~~~~~g~dv-~iva~G~~~~~~~eA~~~L~~~Gi~v~vi~~r~~~Pld~~~i~~~~~~~~~---vv 347 (395)
T 1yd7_A 272 EKIEKNKKDIFTYETYELEDAEI-GVVATGIVARSALRAVKMLREEGIKAGLLKIETIWPFDFELIERIAERVDK---LY 347 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhhcCccEEecCCCCCE-EEEEECccHHHHHHHHHHHHHcCCceEEEEeCeecCCCHHHHHHHHhcCCE---EE
Confidence 001234566 999999999999999987655569999999999999999999999999998 88
Q ss_pred EEecCCCCCCcHHHHHHHHHHhhhhCCCCeEEecCCC
Q psy4209 521 WCQSEPENFGFWKYVQARMCSVMEITTDPVCYIGRDP 557 (856)
Q Consensus 521 ~vqEe~~~~G~~~~i~~~i~~~~~~~~~~~~~vgr~~ 557 (856)
+|+|.. +|++++|+..+... .++.++|+..
T Consensus 348 vvEe~~--G~l~~~v~~~~~~~-----~~~~~~gk~~ 377 (395)
T 1yd7_A 348 VPEMNL--GQLYHLIKEGANGK-----AEVKLISKIG 377 (395)
T ss_dssp -------------------------------------
T ss_pred EEeCCc--hHHHHHHHHHhcCC-----CCeEEEeccC
Confidence 887654 78888888777542 2456666654
No 33
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.58 E-value=9.1e-15 Score=184.20 Aligned_cols=221 Identities=12% Similarity=-0.016 Sum_probs=155.9
Q ss_pred ccccccCCcEEEccCcchHHHHHHHhhhccCCCCcceeecccchhhHHhHHHHHHHHHHhhhhhcCCccCeEEEcCccC-
Q psy4209 276 HIGAEAGKFHVYNSILNEMAALSFEYGYSLVDPNFLVIWEAQFGDFANNAQAVFDQWISSARSKWNIDSGLVLLLPHGI- 354 (856)
Q Consensus 276 ~L~~~~g~~rV~nspLsE~~i~G~~~G~a~~g~~~l~~wE~qfgDF~~~A~~~id~~~a~~~~kw~~~~~lv~~lP~G~- 354 (856)
|+.+.||..+++..+.||.+.+|.++|+|++|.|+++ .. +..++..+...+ .++.|...|+||+.+.+.
T Consensus 46 g~~~~~G~~~~v~~~esE~aA~~aaiGAa~aGaR~~t--~T-----s~~Gl~lm~e~l---~~~ag~~~P~Vi~va~R~g 115 (1231)
T 2c42_A 46 GRKNIFGQTLTIREMQSEAGAAGAVHGALAAGALTTT--FT-----ASQGLLLMIPNM---YKISGELLPGVFHVTARAI 115 (1231)
T ss_dssp TCCCTTSCCCEEEECSSHHHHHHHHHHHHHTTCCEEE--EE-----CHHHHHHHHHHH---HHHHHTTCCCEEEEEECCC
T ss_pred CCchhcCCceEEEecCChHHHHHHHHHHHHcCChHhh--hc-----cHHHHHHHHHHH---HHHhCCCCCEEEEECCCCc
Confidence 4555688889999999999999999999999999999 53 333433333222 233334689999999755
Q ss_pred CCC----CccCCCCchhhhhhhcCCCCcchhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhh--CCCCCcEEEEecccc
Q psy4209 355 EGQ----GPEHSSARPERFLELCSDSPRCVELDMKKQLFDANWFVLYPSTPSTLFHALRRQLL--LPFRRPLVVLTPKAL 428 (856)
Q Consensus 355 ~g~----Gp~HSsar~Er~lql~~e~~~~~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~--~~~~~P~i~~e~K~L 428 (856)
.+. .++||+ .++++.+||.|+.|+||.++|+|++.|.. .+++.|||+|+++.+
T Consensus 116 ~~~glsi~~~hsd---------------------~~~ar~~G~~vl~pss~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~ 174 (1231)
T 2c42_A 116 AAHALSIFGDHQD---------------------IYAARQTGFAMLASSSVQEAHDMALVAHLAAIESNVPFMHFFDGFR 174 (1231)
T ss_dssp CSSSBCCSCCSHH---------------------HHTTTTSSCEEEECCSHHHHHHHHHHHHHHHHHHCCCEEEEEETTT
T ss_pred cCCCCcCCCchhh---------------------HHHHhcCCcEEEECCCHHHHHHHHHHHHHHHHHcCCCEEEEecCcc
Confidence 222 367777 23467799999999999999999999822 246999999999988
Q ss_pred cCCCCCCCcccc------cccC---CCc---------cccCCCc------------------------------------
Q psy4209 429 LRHPQVRSTFED------LSLD---TKF---------RAYLPDT------------------------------------ 454 (856)
Q Consensus 429 ~r~~~~~s~~~e------~~~~---~~f---------~~~i~~a------------------------------------ 454 (856)
+.|......+.| +.+. ..| ..++|.+
T Consensus 175 ~sh~~~~vev~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~g~a~~~~~~~~~~e~~~~~~~~~~~~v~~~~~k~~~~~g 254 (1231)
T 2c42_A 175 TSHEIQKIEVLDYADMASLVNQKALAEFRAKSMNPEHPHVRGTAQNPDIYFQGREAANPYYLKVPGIVAEYMQKVASLTG 254 (1231)
T ss_dssp TTTCEEEEECCCHHHHHHTSCHHHHHHHHHHSCCTTSCCEESCBCCTTTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccceeeeecCCHHHHHhhcChhhhhhccccccCCCCceecCCCcCcchhhhhHhhhhhhhHhhHHHHHHHHHHHHHHhc
Confidence 766321111100 0000 001 1222221
Q ss_pred -c---cc---cCCCCceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHHHHHHH-hcCCCCceEEEEecCC
Q psy4209 455 -M---AD---RNKDKVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRAFINDV-SSYKNVKQVCWCQSEP 526 (856)
Q Consensus 455 -~---~~---~~~~~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~i~~sv-~kt~~~~~~v~vqEe~ 526 (856)
. +. .++.++ +||+||....++.++++.+...|++|.||+|++++|||.++|.++| +++++ +++|++.
T Consensus 255 ~~y~~~e~~g~~dAd~-vIVa~Gs~~~~~~eAv~~L~~~G~kvgvl~lr~~rPfp~~~i~~~l~~~~k~---i~VvE~~- 329 (1231)
T 2c42_A 255 RSYKLFDYVGAPDAER-VIVSMGSSCETIEEVINHLAAKGEKIGLIKVRLYRPFVSEAFFAALPASAKV---ITVLDRT- 329 (1231)
T ss_dssp CCCCSEEEEECTTCSE-EEEECSTHHHHHHHHHHHHHTTTCCEEEEEESEEESCCHHHHHHTSCTTCCE---EEEEESS-
T ss_pred ccccceeeecCCCCCE-EEEEeCHHHHHHHHHHHHHHhcCCceEEEEEEEeCCCCHHHHHHHHHhcCCE---EEEEECC-
Confidence 0 11 233555 8999999999999998876555699999999999999999999999 55566 8888665
Q ss_pred CCCCcH
Q psy4209 527 ENFGFW 532 (856)
Q Consensus 527 ~~~G~~ 532 (856)
+..|+.
T Consensus 330 ~~~g~~ 335 (1231)
T 2c42_A 330 KEPGAP 335 (1231)
T ss_dssp CCTTCS
T ss_pred CCCCCC
Confidence 777764
No 34
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=99.32 E-value=5.5e-12 Score=151.78 Aligned_cols=244 Identities=10% Similarity=0.049 Sum_probs=153.9
Q ss_pred cEEEccCcchHHHHHHHhhhccCCCCcceeecccchhhHHhHHHH----HHHHHHhhhhhcCCcc-CeEEEcCccC---C
Q psy4209 284 FHVYNSILNEMAALSFEYGYSLVDPNFLVIWEAQFGDFANNAQAV----FDQWISSARSKWNIDS-GLVLLLPHGI---E 355 (856)
Q Consensus 284 ~rV~nspLsE~~i~G~~~G~a~~g~~~l~~wE~qfgDF~~~A~~~----id~~~a~~~~kw~~~~-~lv~~lP~G~---~ 355 (856)
.|+++ -|+|.++.|++.|||+.|..+++--=+.|..|+..+..| |.+-++ ..-|.... ++.+.+-|.. +
T Consensus 491 GR~i~-GI~Eh~M~gia~Glal~G~~~f~~t~atFl~~~~~a~~q~akwiR~a~a--~~~wr~~~~~v~~v~Th~si~~G 567 (845)
T 3ahc_A 491 GQVTE-QLSEHQCEGFLEAYLLTGRHGIWSSYESFVHVIDSMLNQHAKWLEATVR--EIPWRKPISSVNLLVSSHVWRQD 567 (845)
T ss_dssp CSEEE-CSCHHHHHHHHHHHHHTTCEEEEEEEHHHHGGGHHHHHHHHHHHHHHHH--HCTTSCCCBCEEEEEESCGGGCT
T ss_pred CcEee-eecHHHHHHHHHHHHhcCCCCceecchhhhchhhhHHHHHHHHHHhhHH--hhhhcccCCceEEEEeCCceeec
Confidence 79999 999999999999999999888774345677666777777 543212 22354443 5777777744 3
Q ss_pred CCCccCCCCchhhhhhhcCCCCcchhhhhhhhcCCCCeEEEecCCcchHHHHHHHhhhCCCCCcEEEEecccccCCCCCC
Q psy4209 356 GQGPEHSSARPERFLELCSDSPRCVELDMKKQLFDANWFVLYPSTPSTLFHALRRQLLLPFRRPLVVLTPKALLRHPQVR 435 (856)
Q Consensus 356 g~Gp~HSsar~Er~lql~~e~~~~~~~~~~~~~~~~gl~V~~pstpad~~~lLr~~i~~~~~~P~i~~e~K~L~r~~~~~ 435 (856)
.-||.|-.--.+-.+- +..|..+|||.|+.|+.+.....+++.++.. ...|.+++..|.=+..
T Consensus 568 eDGpTHQ~~e~~d~l~------------~~r~~~iPn~~V~~PaDanet~~a~~~al~~-~~~~~v~v~sRq~~p~---- 630 (845)
T 3ahc_A 568 HNGFSHQDPGVTSLLI------------NKTFNNDHVTNIYFATDANMLLAISEKCFKS-TNKINAIFAGKQPAPT---- 630 (845)
T ss_dssp TTCGGGCCCTHHHHHG------------GGCCTTCCCEEEEECCSHHHHHHHHHHHHHC-BSCEEEEECCCSCEEE----
T ss_pred CCCCCCCCcHHHHHHH------------HhhccCCCCeEEEeCCCHHHHHHHHHHHHHc-CCCeEEEEecCCCCCc----
Confidence 4578887621121110 0012267999999999999999999999964 2445565534432111
Q ss_pred CcccccccCCCc-cccCCCcccc---cC--C--CCceEEEEcCCcHH-HHHHHHHHHcCCCCcEEEEEeccc---CCCCH
Q psy4209 436 STFEDLSLDTKF-RAYLPDTMAD---RN--K--DKVEKYILCSGKIY-YDLIEARDAANLTEQIAIARLEQI---SPFPY 503 (856)
Q Consensus 436 s~~~e~~~~~~f-~~~i~~a~~~---~~--~--~~v~tvv~~~g~v~-~~l~~a~~~~~~~~~vevi~l~~L---~P~~~ 503 (856)
+.+ .+..+ ....|...+. ++ + .|| +||.||..+- .+|+||+.+...|++|.||++-+| .|.+.
T Consensus 631 --~~~--~~~a~~~~~~G~~v~~~as~d~~g~~~DV-vLiAtGsev~~EAL~AA~~L~~~GI~vRVVsm~~lf~lqp~~~ 705 (845)
T 3ahc_A 631 --WVT--LDEARAELEAGAAEWKWASNAENNDEVQV-VLASAGDVPTQELMAASDALNKMGIKFKVVNVVDLLKLQSREN 705 (845)
T ss_dssp --CSC--HHHHHHHHHHSEEECTTTCCCSSTTTCSE-EEEEESHHHHHHHHHHHHHHHHTTCCEEEEEECBGGGGSCTTT
T ss_pred --cCC--chhhhhhhcCCeEEEEeecccccCCCCCE-EEEEeccHHHHHHHHHHHHHHhCCCCEEEEEeCCCCccCCccc
Confidence 000 00001 1122322221 12 2 566 7888775654 499999887655699999988888 77776
Q ss_pred HHHHHHHhcCCCCceEEEEecCCC---CCCcHHHHHHHHHHhhhhCCCCeEEecCCCC
Q psy4209 504 RAFINDVSSYKNVKQVCWCQSEPE---NFGFWKYVQARMCSVMEITTDPVCYIGRDPS 558 (856)
Q Consensus 504 ~~i~~sv~kt~~~~~~v~vqEe~~---~~G~~~~i~~~i~~~~~~~~~~~~~vgr~~~ 558 (856)
+.+..+.+++.. ++- -|+|. ..|.++-|+..+.+.- ...++.++|-++.
T Consensus 706 ~~~~ls~~~~~~---l~T-~e~h~i~~~gGlgsaV~ell~~r~--~~~~l~v~G~~d~ 757 (845)
T 3ahc_A 706 NDEALTDEEFTE---LFT-ADKPVLFAYHSYAQDVRGLIYDRP--NHDNFHVVGYKEQ 757 (845)
T ss_dssp CTTSCCHHHHHH---HHC-SSSCEEEEESSCHHHHHHHTTTST--TGGGEEEECCCSC
T ss_pred cccccCHHHhCc---Eee-cCCcceeeecCcHHHHHHHHHhCC--CCceEEEEeccCC
Confidence 656556666665 333 35565 4888887776665541 1136899999983
No 35
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=98.89 E-value=2e-09 Score=127.41 Aligned_cols=115 Identities=13% Similarity=0.076 Sum_probs=80.3
Q ss_pred cEEEEEEcCC-ceecc----------CCCCccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEE
Q psy4209 11 GTIHIIINNQ-VGFTA----------NPWETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFID 79 (856)
Q Consensus 11 GvIfvveNNq-yg~sT----------~~~~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe 79 (856)
.+++||.||+ ||+.+ ..........+.++|++||+++++||+ ++++.++.++|.+ .+.+||+|||
T Consensus 466 p~~~vv~nN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~--~~~l~~al~~a~~--~~~~gP~lIe 541 (603)
T 4feg_A 466 PVINVVFTNCQYGFIKDEQEDTNQNDFIGVEFNDIDFSKIADGVHMQAFRVNK--IEQLPDVFEQAKA--IAQHEPVLID 541 (603)
T ss_dssp CCEEEEEECSBCHHHHHHHHHHCSSCCCSSBCCCCCHHHHHHHTTCEEEEECB--GGGHHHHHHHHHH--HTTTSCEEEE
T ss_pred CeEEEEEECCchHHHHHHHHHhcCCCcccCcCCCCCHHHHHHHCCCeEEEECC--HHHHHHHHHHHHH--hcCCCcEEEE
Confidence 4677777775 98732 111122345689999999999999984 5566555555542 1789999999
Q ss_pred Eee---ecCCCCCCCCCCC-CCCHH--HHHHHHhcCCHHHHHHHHHHHcCCCCHHHH
Q psy4209 80 IIG---YRRHGHNEGDDPS-FTQPL--MYEKIKQTKPLFEKYTQKLLQEKVITEDMV 130 (856)
Q Consensus 80 ~~t---YR~~GHse~D~~~-yr~~~--e~~~~~~~dpi~~~~~~~Li~~G~~teeel 130 (856)
+.| ||+-+|...|++. |+..+ ++..++++||+ .+|+++|.++|++++++.
T Consensus 542 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~l~~~g~~~~~~~ 597 (603)
T 4feg_A 542 AVITGDRPLPAEKLRLDSAMSSAADIEAFKQRYEAQDL-QPLSTYLKQFGLDDLQHQ 597 (603)
T ss_dssp EECCCCCCCCTTSCCCCTTTSCHHHHHHHHHHHTCTTC-CCHHHHHHHTTC------
T ss_pred EEeCCCCCCCcccchhhhhhhhHHHHHHHHhhCCcccC-CchHHHHHHcCCchhhhh
Confidence 999 7778998888776 65433 56667778987 999999999999998753
No 36
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=98.52 E-value=1.5e-07 Score=88.32 Aligned_cols=92 Identities=16% Similarity=0.095 Sum_probs=70.5
Q ss_pred CCCceEEEEcCCcHHHHHHHHHHHcCCCCcEEEEEecccCCCCHHHHHHHHhcCCCCceEEEEecCCCCCCcHHHHHHHH
Q psy4209 460 KDKVEKYILCSGKIYYDLIEARDAANLTEQIAIARLEQISPFPYRAFINDVSSYKNVKQVCWCQSEPENFGFWKYVQARM 539 (856)
Q Consensus 460 ~~~v~tvv~~~g~v~~~l~~a~~~~~~~~~vevi~l~~L~P~~~~~i~~sv~kt~~~~~~v~vqEe~~~~G~~~~i~~~i 539 (856)
+.++ +||+||.++..++++++.+...|+++.+|++++++|||.+.|.+.++++.+ +++++ +..++|++++|...+
T Consensus 13 g~dv-~iv~~Gs~~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~~~~~---vvvvE-~~~~G~l~~~i~~~~ 87 (118)
T 3ju3_A 13 EADI-TFVTWGSQKGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANL---VIDVE-SNYTAQAAQMIKLYT 87 (118)
T ss_dssp SCSE-EEEEEGGGHHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHTTCSC---CCCCC-CCCCCCHHHHHHHHH
T ss_pred CCCE-EEEEECccHHHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHcCCCE---EEEEE-CCCCCcHHHHHHHHc
Confidence 4667 999999999999999987654459999999999999999999999999988 67665 566899999987644
Q ss_pred HHhhhhCCCCeEEecCCCC
Q psy4209 540 CSVMEITTDPVCYIGRDPS 558 (856)
Q Consensus 540 ~~~~~~~~~~~~~vgr~~~ 558 (856)
.. .....-.+|-|||..
T Consensus 88 ~~--~~~~~i~~~~G~~~~ 104 (118)
T 3ju3_A 88 GI--DIKNKILKYNGRHMT 104 (118)
T ss_dssp CC--CCCCCCCCBTTBCCC
T ss_pred CC--CceeEEeeeCCeeCC
Confidence 21 111222355666653
No 37
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=96.92 E-value=0.0016 Score=76.65 Aligned_cols=73 Identities=19% Similarity=0.229 Sum_probs=56.5
Q ss_pred cEEEEEEcC-CceeccCCCCc---------cccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy4209 11 GTIHIIINN-QVGFTANPWET---------RSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDI 80 (856)
Q Consensus 11 GvIfvveNN-qyg~sT~~~~~---------~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~ 80 (856)
.+++||.|| +||++...... .....+..+|++||+++++|+ +++++..+.++|++.+|. +||+|||+
T Consensus 459 ~~~ivv~NN~~~~~~~~~q~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~-~gp~liev 535 (590)
T 1v5e_A 459 PVINVVFSNTEYAFIKNKYEDTNKNLFGVDFTDVDYAKIAEAQGAKGFTVS--RIEDMDRVMAEAVAANKA-GHTVVIDC 535 (590)
T ss_dssp CCEEEEEECSSCTTGGGTTSSSCCSCCCCCCCCCCHHHHHHHTTSEEEEEC--BHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CCEEEEEECCchHHHHHHHHHhcCCCccccCCCCCHHHHHHHcCCEEEEEC--CHHHHHHHHHHHHHhcCC-CCCEEEEE
Confidence 355666555 89998753211 123568899999999999997 689999999999988775 79999999
Q ss_pred eeecCC
Q psy4209 81 IGYRRH 86 (856)
Q Consensus 81 ~tYR~~ 86 (856)
.|+|-.
T Consensus 536 ~~~~~~ 541 (590)
T 1v5e_A 536 KITQDR 541 (590)
T ss_dssp ECCSCC
T ss_pred Eecccc
Confidence 999743
No 38
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=96.53 E-value=0.00079 Score=78.03 Aligned_cols=68 Identities=18% Similarity=0.138 Sum_probs=48.1
Q ss_pred cEEEEEEcC-CceeccCCC------Cc----cccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEE
Q psy4209 11 GTIHIIINN-QVGFTANPW------ET----RSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFID 79 (856)
Q Consensus 11 GvIfvveNN-qyg~sT~~~------~~----~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe 79 (856)
.+++||.|| +||+.+... .. .....+..+|++||+++++||+ ++++.. |++.+++.+||+|||
T Consensus 447 ~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~--~~~l~~----al~~a~~~~gp~lie 520 (528)
T 1q6z_A 447 PTIFVIMNNGTYGALRWFAGVLEAENVPGLDVPGIDFRALAKGYGVQALKADN--LEQLKG----SLQEALSAKGPVLIE 520 (528)
T ss_dssp CCEEEEEECSBCHHHHHHHHHHTCCSCCSCBCCCCCHHHHHHHHTCEEEEESS--HHHHHH----HHHHHHTCSSCEEEE
T ss_pred CeEEEEEeCCcchHhHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCeEEEeCC--HHHHHH----HHHHHHHCCCcEEEE
Confidence 467777777 599866421 00 1234678999999999999985 455544 455556678999999
Q ss_pred Eeeec
Q psy4209 80 IIGYR 84 (856)
Q Consensus 80 ~~tYR 84 (856)
+.|.|
T Consensus 521 v~~~~ 525 (528)
T 1q6z_A 521 VSTVS 525 (528)
T ss_dssp EEBCC
T ss_pred EEecC
Confidence 99986
No 39
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=96.53 E-value=0.0029 Score=74.72 Aligned_cols=51 Identities=16% Similarity=0.215 Sum_probs=45.7
Q ss_pred chhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCC
Q psy4209 34 MYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRH 86 (856)
Q Consensus 34 ~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~ 86 (856)
..+..+|++||+++++|+ +++++..+.++|++++|+.+||+|||+.|+|..
T Consensus 532 ~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~~~gp~lIev~~~~~~ 582 (616)
T 2pan_A 532 VDHVKVAEGLGCKAIRVF--KPEDIAPAFEQAKALMAQYRVPVVVEVILERVT 582 (616)
T ss_dssp CCHHHHHHHTTCEEEEEC--SGGGHHHHHHHHHHHHHHHCSCEEEEEEBCSCC
T ss_pred CCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHhhcccCCCcEEEEEEecccc
Confidence 457889999999999996 688999999999999888899999999999855
No 40
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=96.11 E-value=0.0039 Score=72.81 Aligned_cols=68 Identities=7% Similarity=-0.050 Sum_probs=43.9
Q ss_pred cEEEEEEcCC-ceeccCC-------C---CccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEE
Q psy4209 11 GTIHIIINNQ-VGFTANP-------W---ETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFID 79 (856)
Q Consensus 11 GvIfvveNNq-yg~sT~~-------~---~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe 79 (856)
.+++||.||+ ||+.... . ......++..+|++||+++++|+ +++++..+ ++.+++.+||+|||
T Consensus 461 pv~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~a----l~~a~~~~gp~lie 534 (556)
T 3hww_A 461 PLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQ--NWQELETA----FADAWRTPTTTVIE 534 (556)
T ss_dssp CEEEEEEESCC-----------------CCCCCCCCSHHHHHHTTCEEECCS--SHHHHHHH----HHHHTTSSSEEEEE
T ss_pred CcEEEEEECCCCCcccCCCCcchhHHHhccCCCCCCHHHHHHHcCCcEEecC--CHHHHHHH----HHHHHhCCCCEEEE
Confidence 5777888777 4654321 1 11124567899999999999997 45555444 45556678999999
Q ss_pred Eeeec
Q psy4209 80 IIGYR 84 (856)
Q Consensus 80 ~~tYR 84 (856)
+.|.|
T Consensus 535 v~~~~ 539 (556)
T 3hww_A 535 MVVND 539 (556)
T ss_dssp EECCS
T ss_pred EECCc
Confidence 99865
No 41
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=96.05 E-value=0.003 Score=73.86 Aligned_cols=69 Identities=19% Similarity=0.161 Sum_probs=49.4
Q ss_pred cEEEEEEcC-CceeccCCC---------CccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy4209 11 GTIHIIINN-QVGFTANPW---------ETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDI 80 (856)
Q Consensus 11 GvIfvveNN-qyg~sT~~~---------~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~ 80 (856)
.+++||.|| +||++.... .......+..+|++||+++++|+ +++++..+.++|+ +.+||+|||+
T Consensus 466 ~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~----~~~gp~liev 539 (566)
T 1ozh_A 466 NVLHLIWVDNGYNMVAIQEEKKYQRLSGVEFGPMDFKAYAESFGAKGFAVE--SAEALEPTLRAAM----DVDGPAVVAI 539 (566)
T ss_dssp CEEEEEEECSBCHHHHHHHHHHHSSCCSCBCCCCCHHHHHHTTTSEEEECC--SGGGHHHHHHHHH----HSSSCEEEEE
T ss_pred CcEEEEEECCchhHHHHHHHHhcCCCccCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHH----hCCCCEEEEE
Confidence 456666666 698865311 11223568899999999999997 4667777766665 4689999999
Q ss_pred eeecC
Q psy4209 81 IGYRR 85 (856)
Q Consensus 81 ~tYR~ 85 (856)
.|+|-
T Consensus 540 ~~~~~ 544 (566)
T 1ozh_A 540 PVDYR 544 (566)
T ss_dssp EBCCT
T ss_pred EeCCC
Confidence 99873
No 42
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=95.77 E-value=0.013 Score=68.40 Aligned_cols=68 Identities=24% Similarity=0.191 Sum_probs=49.1
Q ss_pred cEEEEEEc-CCceeccCCC-------Ccc----ccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEE
Q psy4209 11 GTIHIIIN-NQVGFTANPW-------ETR----SSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFI 78 (856)
Q Consensus 11 GvIfvveN-Nqyg~sT~~~-------~~~----s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlI 78 (856)
.+++||.| |+||++.... ... ....+..+|++||+++++|+ +++++.++.++|++ .+||+||
T Consensus 467 ~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~li 540 (563)
T 2uz1_A 467 PLIVIIMNNQSWGATLHFQQLAVGPNRVTGTRLENGSYHGVAAAFGADGYHVD--SVESFSAALAQALA----HNRPACI 540 (563)
T ss_dssp CCEEEEEECSBCHHHHHHHHHHTCTTCCCSCBCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHH----SSSCEEE
T ss_pred CeEEEEEeCCcchHHHHHHHHhcCCCcccCCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHH----CCCCEEE
Confidence 35555555 5799876421 111 22467899999999999996 68888777777764 6899999
Q ss_pred EEeeec
Q psy4209 79 DIIGYR 84 (856)
Q Consensus 79 e~~tYR 84 (856)
|+.|++
T Consensus 541 ev~~~~ 546 (563)
T 2uz1_A 541 NVAVAL 546 (563)
T ss_dssp EEECCS
T ss_pred EEEecc
Confidence 999984
No 43
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=95.77 E-value=0.008 Score=70.37 Aligned_cols=68 Identities=13% Similarity=0.131 Sum_probs=48.5
Q ss_pred cEEEEEEcC-CceeccCC---------C--CccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEE
Q psy4209 11 GTIHIIINN-QVGFTANP---------W--ETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFI 78 (856)
Q Consensus 11 GvIfvveNN-qyg~sT~~---------~--~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlI 78 (856)
.+++||.|| +||++... . .......+..+|++||+++++|+ |++++..+.++|. +.+||+||
T Consensus 482 ~~~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~----~~~gp~li 555 (573)
T 2iht_A 482 PIVTVVVNNDTNGLIELYQNIGHHRSHDPAVKFGGVDFVALAEANGVDATRAT--NREELLAALRKGA----ELGRPFLI 555 (573)
T ss_dssp CCEEEEEECSBCHHHHHHHHHHHSSCCGGGTBCCCCCHHHHHHHTTCEEEECC--SHHHHHHHHHHHH----TSSSCEEE
T ss_pred CeEEEEEECCcchhhHHHHHHhcCCCcCccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHH----hCCCCEEE
Confidence 345555555 59987641 0 11123467899999999999996 6777766666654 57899999
Q ss_pred EEeeec
Q psy4209 79 DIIGYR 84 (856)
Q Consensus 79 e~~tYR 84 (856)
|+.|+|
T Consensus 556 ev~~~~ 561 (573)
T 2iht_A 556 EVPVNY 561 (573)
T ss_dssp EEEBCC
T ss_pred EEECCC
Confidence 999998
No 44
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=95.74 E-value=0.0081 Score=70.22 Aligned_cols=67 Identities=9% Similarity=-0.014 Sum_probs=47.2
Q ss_pred EEEEEEcCCceeccCCCC-----ccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcE-EEEEeeec
Q psy4209 12 TIHIIINNQVGFTANPWE-----TRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDA-FIDIIGYR 84 (856)
Q Consensus 12 vIfvveNNqyg~sT~~~~-----~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPv-lIe~~tYR 84 (856)
+|+|+.||+||+...... ......+..+|++||+++++|+ +++++.++.++|++ .+||+ |||+.|+|
T Consensus 470 ~ivv~nN~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~~liev~~~~ 542 (565)
T 2nxw_A 470 IVILFNNASWEMLRTFQPESAFNDLDDWRFADMAAGMGGDGVRVR--TRAELKAALDKAFA----TRGRFQLIEAMIPR 542 (565)
T ss_dssp EEEEEECSBCHHHHHHCTTCGGGBCCCCCHHHHTGGGTSEEEEEC--BHHHHHHHHHHHHH----CCSSCEEEEEECCT
T ss_pred EEEEEECCCCcEEeeecccCCCCcCCCCCHHHHHHHcCCCEEEeC--CHHHHHHHHHHHHh----cCCCeEEEEEEccc
Confidence 444445556998643211 1123467899999999999997 57787777777654 56898 99999986
No 45
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=95.59 E-value=0.0093 Score=69.65 Aligned_cols=67 Identities=12% Similarity=0.055 Sum_probs=49.0
Q ss_pred EEEEEEcCCceeccCCCC----ccccchhhhhhhhcCC-----cEEEEeCCCHHHHHHHHHHHHHHHHcc-CCcEEEEEe
Q psy4209 12 TIHIIINNQVGFTANPWE----TRSSMYCTCVAKVIGA-----PVFHVNADEPEVVVSIMKLLARYRQTF-KRDAFIDII 81 (856)
Q Consensus 12 vIfvveNNqyg~sT~~~~----~~s~~~~sdrAk~~gi-----p~~~VDG~D~~aV~~a~~~Av~~~R~g-~gPvlIe~~ 81 (856)
+|+|+.||+||+...... ......+..+|++||+ ++++|+ +++++..+.++|.+ . +||+|||+.
T Consensus 457 ~ivv~nN~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a~~----~~~gp~liev~ 530 (566)
T 2vbi_A 457 IIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKAT--TPKELTEAIARAKA----NTRGPTLIECQ 530 (566)
T ss_dssp EEEEEECSSCHHHHTTSCCGGGCCCCCCTTTHHHHHHTTTCCCEEEEEC--SHHHHHHHHHHHHH----CCSSCEEEEEE
T ss_pred EEEEEECCcceEEEeeccCCccCCCCCCHHHHHHHcCCCCCCccEEEeC--CHHHHHHHHHHHHh----cCCCcEEEEEE
Confidence 445555568999875432 1123467889999999 999997 57787777776654 3 799999999
Q ss_pred eec
Q psy4209 82 GYR 84 (856)
Q Consensus 82 tYR 84 (856)
|+|
T Consensus 531 ~~~ 533 (566)
T 2vbi_A 531 IDR 533 (566)
T ss_dssp CCT
T ss_pred eCc
Confidence 986
No 46
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=95.51 E-value=0.02 Score=68.57 Aligned_cols=69 Identities=14% Similarity=0.159 Sum_probs=49.0
Q ss_pred EEEEEEcCCceeccCC------CC----ccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy4209 12 TIHIIINNQVGFTANP------WE----TRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDII 81 (856)
Q Consensus 12 vIfvveNNqyg~sT~~------~~----~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~ 81 (856)
+|+|+.||+||+.+.. .. ......+..+|++||+++++|+ +++++..+.++|++ .+||+|||+.
T Consensus 561 ~ivV~NN~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~la~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~lIev~ 634 (677)
T 1t9b_A 561 KILILNNEEQGMVTQWQSLFYEHRYSHTHQLNPDFIKLAEAMGLKGLRVK--KQEELDAKLKEFVS----TKGPVLLEVE 634 (677)
T ss_dssp EEEEEECSSCHHHHHHHHHHSTTCCCSCCCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHH----CSSCEEEEEE
T ss_pred EEEEEeCCCchhhhhhhhhhcCCCcccCcCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHH----CCCcEEEEEE
Confidence 4455555569986521 10 1123467899999999999995 57888777776653 6899999999
Q ss_pred eecCC
Q psy4209 82 GYRRH 86 (856)
Q Consensus 82 tYR~~ 86 (856)
|+|-.
T Consensus 635 ~~~~~ 639 (677)
T 1t9b_A 635 VDKKV 639 (677)
T ss_dssp BCSSC
T ss_pred ecCCc
Confidence 99853
No 47
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=95.49 E-value=0.015 Score=67.89 Aligned_cols=68 Identities=18% Similarity=0.159 Sum_probs=47.6
Q ss_pred EEEEEEcCCceeccCCC---C---ccccchhhhhhhhcCCc-----EEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy4209 12 TIHIIINNQVGFTANPW---E---TRSSMYCTCVAKVIGAP-----VFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDI 80 (856)
Q Consensus 12 vIfvveNNqyg~sT~~~---~---~~s~~~~sdrAk~~gip-----~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~ 80 (856)
+|+|+.||+||+..... . ......+.++|++||++ +++|+ +++++..+.++| +++.+||+|||+
T Consensus 473 ~ivv~nN~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a---~~~~~~p~liev 547 (570)
T 2vbf_A 473 ICFIINNDGYTVEREIHGPTQSYNDIPMWNYSKLPETFGATEDRVVSKIVR--TENEFVSVMKEA---QADVNRMYWIEL 547 (570)
T ss_dssp EEEEEESSSCHHHHHHSCTTCGGGCCCCCCGGGHHHHTTCCTTTEEEEEEC--BHHHHHHHHHHH---HHCTTSEEEEEE
T ss_pred EEEEEECCchHHHHHHhccCCCccCCCCCCHHHHHHHcCCCcCCcceEEec--CHHHHHHHHHHH---HhcCCCcEEEEE
Confidence 44444556899876321 1 11234678899999999 88996 477776666654 356789999999
Q ss_pred eeec
Q psy4209 81 IGYR 84 (856)
Q Consensus 81 ~tYR 84 (856)
.|+|
T Consensus 548 ~~~~ 551 (570)
T 2vbf_A 548 VLEK 551 (570)
T ss_dssp ECCT
T ss_pred EcCc
Confidence 9986
No 48
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=95.47 E-value=0.024 Score=66.12 Aligned_cols=70 Identities=7% Similarity=0.007 Sum_probs=49.7
Q ss_pred cEEEEEEcCC-c-eeccCC-------CC--ccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEE
Q psy4209 11 GTIHIIINNQ-V-GFTANP-------WE--TRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFID 79 (856)
Q Consensus 11 GvIfvveNNq-y-g~sT~~-------~~--~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe 79 (856)
.+++||.||+ | ++.... .. ......+..+|++||+++++|+ +++++..+.++|+ +.+||+|||
T Consensus 466 ~~~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~----~~~~p~lie 539 (564)
T 2q28_A 466 PVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVT--TTDELRHALTTGI----QSRKPTIIN 539 (564)
T ss_dssp CEEEEEEECSBSSCSCCCCTTSSCCCCTTBCCTTCCGGGGGGGGTCEEEEEC--SHHHHHHHHHHHH----HHTSCEEEE
T ss_pred CeEEEEEeCchhHHHHHHHHhccCCccccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHH----hCCCCEEEE
Confidence 5777888876 3 543211 00 1113467889999999999996 5888888877776 357899999
Q ss_pred EeeecCC
Q psy4209 80 IIGYRRH 86 (856)
Q Consensus 80 ~~tYR~~ 86 (856)
+.|.|..
T Consensus 540 v~~~~~~ 546 (564)
T 2q28_A 540 VVIDPAA 546 (564)
T ss_dssp EEBCTTS
T ss_pred EEecccc
Confidence 9999753
No 49
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=95.38 E-value=0.025 Score=66.12 Aligned_cols=69 Identities=12% Similarity=0.070 Sum_probs=49.8
Q ss_pred cEEEEEEcCC-c-eeccCC---CCc----cccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy4209 11 GTIHIIINNQ-V-GFTANP---WET----RSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDII 81 (856)
Q Consensus 11 GvIfvveNNq-y-g~sT~~---~~~----~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~ 81 (856)
.+++||.||+ | ++.... ... .....+..+|++||+++++|+ +++++..+.++|++ .+||+|||+.
T Consensus 471 ~~~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~~p~liev~ 544 (568)
T 2c31_A 471 PVTVIIMNNGGIYKGNEADPQPGVISCTRLTRGRYDMMMEAFGGKGYVAN--TPAELKAALEEAVA----SGKPCLINAM 544 (568)
T ss_dssp CEEEEEEESSBSSCSCCCCSBTTBCCTTBCCCCCHHHHHHTTTCEEEEES--SHHHHHHHHHHHHH----HTSCEEEEEE
T ss_pred CeEEEEEeCchhHHHHHHHhhcCCcccCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEE
Confidence 5788888887 3 433211 000 223467899999999999996 68888888877763 5789999999
Q ss_pred eecC
Q psy4209 82 GYRR 85 (856)
Q Consensus 82 tYR~ 85 (856)
|+|.
T Consensus 545 ~~~~ 548 (568)
T 2c31_A 545 IDPD 548 (568)
T ss_dssp BCTT
T ss_pred eccc
Confidence 9874
No 50
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=95.34 E-value=0.015 Score=67.83 Aligned_cols=69 Identities=10% Similarity=0.021 Sum_probs=50.4
Q ss_pred cEEEEEEcCCceeccCCCC----ccccchhhhhhhhcCC---------cEEEEeCCCHHHHHHHHHHHHHHHHccCCcEE
Q psy4209 11 GTIHIIINNQVGFTANPWE----TRSSMYCTCVAKVIGA---------PVFHVNADEPEVVVSIMKLLARYRQTFKRDAF 77 (856)
Q Consensus 11 GvIfvveNNqyg~sT~~~~----~~s~~~~sdrAk~~gi---------p~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvl 77 (856)
=+|+|+.||+||++....+ ......+..+|++||+ ++++|+ +++++..+.++|++. .+||+|
T Consensus 460 ~~ivv~NN~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~~~~~v~--~~~el~~al~~a~~~---~~gp~l 534 (568)
T 2wvg_A 460 VIIFLINNYGYTIEVMIHDGPYNNIKNWDYAGLMEVFNGNGGYDSGAGKGLKAK--TGGELAEAIKVALAN---TDGPTL 534 (568)
T ss_dssp CEEEEEECSSCHHHHTTSCCGGGCCCCCCHHHHHHHHHCTTSSSCCCCEEEEES--BHHHHHHHHHHHHHC---CSSCEE
T ss_pred cEEEEEECCcceEeeeeccCCCcCCCCCCHHHHHHHhCCCcccccCCcceEEeC--CHHHHHHHHHHHHhc---CCCcEE
Confidence 3455566678999875432 1122457889999999 899996 578887777777653 279999
Q ss_pred EEEeeec
Q psy4209 78 IDIIGYR 84 (856)
Q Consensus 78 Ie~~tYR 84 (856)
||+.|+|
T Consensus 535 iev~~~~ 541 (568)
T 2wvg_A 535 IECFIGR 541 (568)
T ss_dssp EEEECCT
T ss_pred EEEEcCc
Confidence 9999986
No 51
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=95.27 E-value=0.0068 Score=71.24 Aligned_cols=70 Identities=16% Similarity=0.090 Sum_probs=49.1
Q ss_pred cEEEEEEcC-CceeccCCC---------CccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy4209 11 GTIHIIINN-QVGFTANPW---------ETRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDI 80 (856)
Q Consensus 11 GvIfvveNN-qyg~sT~~~---------~~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~ 80 (856)
.+++||.|| +||++.... .......+..+|++||+++++|+. ++++..+.++|++ .+||+|||+
T Consensus 470 ~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~--~~el~~al~~a~~----~~gp~liev 543 (589)
T 2pgn_A 470 PVITMVFTNESYGANWTLMNHQFGQNNWTEFMNPDWVGIAKAFGAYGESVRE--TGDIAGALQRAID----SGKPALIEI 543 (589)
T ss_dssp CCEEEEEECSBCHHHHHHHHHHHSSCCSCBCCCCCHHHHHHHHTCEEEECTT--TCCHHHHHHHHHH----HCSCEEEEE
T ss_pred CeEEEEEECCCcccchHHHHhhcCCCccccCCCCCHHHHHHHCCCeEEEECC--HHHHHHHHHHHHh----CCCCEEEEE
Confidence 345555555 598876321 111235688999999999999975 5566666666653 589999999
Q ss_pred eeecCC
Q psy4209 81 IGYRRH 86 (856)
Q Consensus 81 ~tYR~~ 86 (856)
.|+|-.
T Consensus 544 ~~~~~~ 549 (589)
T 2pgn_A 544 PVSKTQ 549 (589)
T ss_dssp ECCSSS
T ss_pred EecCCC
Confidence 999754
No 52
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=95.21 E-value=0.024 Score=66.60 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=38.8
Q ss_pred chhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCC
Q psy4209 34 MYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRH 86 (856)
Q Consensus 34 ~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~ 86 (856)
..+..+|++||+++++|+ +++++..+.++|+ +.+||+|||+.|+|..
T Consensus 514 ~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~----~~~gp~liev~~~~~~ 560 (590)
T 1ybh_A 514 PNMLLFAAACGIPAARVT--KKADLREAIQTML----DTPGPYLLDVICPHQE 560 (590)
T ss_dssp SCHHHHHHHTTCCEEEEC--BHHHHHHHHHHHH----HSSSCEEEEEECCTTC
T ss_pred CCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHH----hCCCCEEEEEEecCCc
Confidence 467889999999999996 6788777777665 4589999999999854
No 53
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=95.10 E-value=0.011 Score=68.85 Aligned_cols=69 Identities=9% Similarity=-0.009 Sum_probs=47.8
Q ss_pred cEEEEEEcC-CceeccCCC----C--ccccchhhhhhhhcCCc---EEEEeCCCHHHHHHHHH-HHHHHHHccCCcEEEE
Q psy4209 11 GTIHIIINN-QVGFTANPW----E--TRSSMYCTCVAKVIGAP---VFHVNADEPEVVVSIMK-LLARYRQTFKRDAFID 79 (856)
Q Consensus 11 GvIfvveNN-qyg~sT~~~----~--~~s~~~~sdrAk~~gip---~~~VDG~D~~aV~~a~~-~Av~~~R~g~gPvlIe 79 (856)
.+++||.|| +||++.... . ......+.++|++||++ +++|| +++++..+.+ +|++ ..++|+|||
T Consensus 463 ~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~v~--~~~el~~al~~~a~~---~~~~p~lie 537 (563)
T 2vk8_A 463 KPYLFVLNNDGYTIQKLIHGPKAQYNEIQGWDHLSLLPTFGAKDYETHRVA--TTGEWDKLTQDKSFN---DNSKIRMIE 537 (563)
T ss_dssp CCEEEEEESSSCHHHHHHSCTTCGGGCCCCCCGGGHHHHTTCSSEEEEEEC--BHHHHHHHHTCTTTT---SCSSEEEEE
T ss_pred CcEEEEEECCcchhhhhhhCCCCCcccCCCCCHHHHHHHhCCCCCcEEEec--CHHHHHHHHHHHHHh---CCCCcEEEE
Confidence 356666555 599865321 0 11234678899999999 99998 4778777776 5543 345799999
Q ss_pred Eeeec
Q psy4209 80 IIGYR 84 (856)
Q Consensus 80 ~~tYR 84 (856)
+.|+|
T Consensus 538 v~~~~ 542 (563)
T 2vk8_A 538 VMLPV 542 (563)
T ss_dssp EECCT
T ss_pred EEeCc
Confidence 99985
No 54
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=94.95 E-value=0.025 Score=65.78 Aligned_cols=68 Identities=13% Similarity=0.235 Sum_probs=47.5
Q ss_pred cEEEEEEcC-CceeccCCC---C---ccccchhhhhhhhcCC----cEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEE
Q psy4209 11 GTIHIIINN-QVGFTANPW---E---TRSSMYCTCVAKVIGA----PVFHVNADEPEVVVSIMKLLARYRQTFKRDAFID 79 (856)
Q Consensus 11 GvIfvveNN-qyg~sT~~~---~---~~s~~~~sdrAk~~gi----p~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe 79 (856)
.+++||.|| +||++.... . ......+..+|++||+ ++++|+ +++++..+.++| ++.+||+|||
T Consensus 454 ~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~v~--~~~~l~~al~~a----~~~~gp~lie 527 (552)
T 1ovm_A 454 HPIILVLNNEGYTVERAIHGAEQRYNDIALWNWTHIPQALSLDPQSECWRVS--EAEQLADVLEKV----AHHERLSLIE 527 (552)
T ss_dssp CCEEEEEESSSCHHHHHHSCTTCGGGCCCCCCGGGSTTTSCSSCCEEEEEEC--BHHHHHHHHHHH----TTCSSEEEEE
T ss_pred CCEEEEEECCCCeEEEeeccCCCCcccCCCCCHHHHHHHhCCCcCCCEEEeC--CHHHHHHHHHHH----HhCCCCEEEE
Confidence 355666555 599874311 1 1123467889999999 899997 567776666554 5578999999
Q ss_pred Eeeec
Q psy4209 80 IIGYR 84 (856)
Q Consensus 80 ~~tYR 84 (856)
+.|++
T Consensus 528 v~~~~ 532 (552)
T 1ovm_A 528 VMLPK 532 (552)
T ss_dssp EECCT
T ss_pred EEcCc
Confidence 99986
No 55
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=94.79 E-value=0.0096 Score=70.19 Aligned_cols=67 Identities=13% Similarity=0.024 Sum_probs=46.5
Q ss_pred EEEEEEcCCceeccCCCC-c-----------cccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEE
Q psy4209 12 TIHIIINNQVGFTANPWE-T-----------RSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFID 79 (856)
Q Consensus 12 vIfvveNNqyg~sT~~~~-~-----------~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe 79 (856)
+|+|+.||+||+...... + .....+..+|++||+++++|+ +++++..+.++|+ +.+||+|||
T Consensus 502 ~ivv~NN~~~~i~~~~~~~q~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~----~~~gp~lie 575 (604)
T 2x7j_A 502 TVILVNNDGGGIFSFLPQASEKTHFEDLFGTPTGLDFKHAAALYGGTYSCPA--SWDEFKTAYAPQA----DKPGLHLIE 575 (604)
T ss_dssp EEEEEECSSCGGGGGSGGGSCHHHHHHHTTCCCCCCTHHHHHHTTCEEECCS--SHHHHHHHCCCCC----SSCCEEEEE
T ss_pred EEEEEeCCCCcccccCCCCccchhhHhhccCCCCCCHHHHHHHcCCeEEecC--CHHHHHHHHHHHH----hCCCCEEEE
Confidence 444445558998543211 0 112467889999999999997 5777766666554 468999999
Q ss_pred Eeeec
Q psy4209 80 IIGYR 84 (856)
Q Consensus 80 ~~tYR 84 (856)
+.|+|
T Consensus 576 v~~~~ 580 (604)
T 2x7j_A 576 IKTDR 580 (604)
T ss_dssp EECCH
T ss_pred EECCc
Confidence 99864
No 56
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=94.73 E-value=0.042 Score=63.87 Aligned_cols=69 Identities=14% Similarity=0.212 Sum_probs=45.8
Q ss_pred EEEEEEcCCceeccCCCC---------ccccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEee
Q psy4209 12 TIHIIINNQVGFTANPWE---------TRSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIG 82 (856)
Q Consensus 12 vIfvveNNqyg~sT~~~~---------~~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~t 82 (856)
+|+|+.||+||+.+.... .....++..+|++||+++++|+ +++++..+.++|. +.+||+|||+.|
T Consensus 454 ~ivv~nN~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~----~~~gp~liev~~ 527 (549)
T 3eya_A 454 KIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVE--KASEVDEALQRAF----SIDGPVLVDVVV 527 (549)
T ss_dssp EEEEEECSBCCCC------------CCBCCCCCHHHHHHHTTSEEEEEC--SGGGHHHHHHHHH----HSSSCEEEEEEB
T ss_pred EEEEEeCCccHHHHHHHHhcCCCCcCCcCCCCCHHHHHHHcCCcEEEeC--CHHHHHHHHHHHH----hCCCCEEEEEEe
Confidence 455555557888642111 1123467899999999999995 5666666665554 468999999999
Q ss_pred ecCC
Q psy4209 83 YRRH 86 (856)
Q Consensus 83 YR~~ 86 (856)
.|..
T Consensus 528 ~~~~ 531 (549)
T 3eya_A 528 AKEE 531 (549)
T ss_dssp CCCC
T ss_pred cccc
Confidence 8743
No 57
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=94.30 E-value=0.033 Score=65.23 Aligned_cols=68 Identities=13% Similarity=0.086 Sum_probs=39.9
Q ss_pred cEEEEEEcC-CceeccCC-CCc-----------cccchhhhhhhhcCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEE
Q psy4209 11 GTIHIIINN-QVGFTANP-WET-----------RSSMYCTCVAKVIGAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAF 77 (856)
Q Consensus 11 GvIfvveNN-qyg~sT~~-~~~-----------~s~~~~sdrAk~~gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvl 77 (856)
.+++||.|| +||+.... ..+ ....++..+|++||+++++|+ +++++..+.++| .+.+||+|
T Consensus 480 ~~~ivv~NN~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a----~~~~gp~l 553 (578)
T 3lq1_A 480 NLTIVIVNNDGGGIFSFLPQANEPKYFESLFGTSTELDFRFAAAFYDADYHEAK--SVDELEEAIDKA----SYHKGLDI 553 (578)
T ss_dssp CEEEEEECCC-------------------------CCCTHHHHHHTTCEEEECC--SHHHHHHHHHHH----TTSSSEEE
T ss_pred CeEEEEEECCcCccccccccccccchhhhhccCCCCCCHHHHHHHcCCceEecC--CHHHHHHHHHHH----HhCCCCEE
Confidence 466666666 68876521 101 012367889999999999996 677776666555 44689999
Q ss_pred EEEeeec
Q psy4209 78 IDIIGYR 84 (856)
Q Consensus 78 Ie~~tYR 84 (856)
||+.|.|
T Consensus 554 iev~~~~ 560 (578)
T 3lq1_A 554 IEVKTNR 560 (578)
T ss_dssp EEEC---
T ss_pred EEEECCc
Confidence 9999875
No 58
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=80.05 E-value=2.7 Score=53.58 Aligned_cols=48 Identities=6% Similarity=-0.020 Sum_probs=39.7
Q ss_pred chhhhhhhhcCCcEEEE-eC-CCHHHHHHHHHHHHHHHHccCCcEEEEEeeecC
Q psy4209 34 MYCTCVAKVIGAPVFHV-NA-DEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRR 85 (856)
Q Consensus 34 ~~~sdrAk~~gip~~~V-DG-~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~ 85 (856)
.++..+|++||++++.+ .- .|+.++..+.++|++ .+||+|||+.+--.
T Consensus 1022 ~D~~~iA~a~G~~~va~~~v~~~~~~l~~al~eAl~----~~GP~lI~v~~~c~ 1071 (1231)
T 2c42_A 1022 KDLARMVMTYGYVYVATVSMGYSKQQFLKVLKEAES----FPGPSLVIAYATCI 1071 (1231)
T ss_dssp CCHHHHHHTTSSSEEEEECTTTCHHHHHHHHHHHHH----SSSCEEEEEECCCG
T ss_pred hhHHHHHHHCCCCEEEEEeccCCHHHHHHHHHHHHh----cCCCEEEEEeecCc
Confidence 46888999999999964 45 599999999999886 48999999987543
No 59
>1bwx_A Parathyroid hormone; peptide hormone, solution structure; NMR {Homo sapiens} SCOP: j.15.1.1 PDB: 1zwf_A 1zwg_A* 2l1x_A
Probab=44.54 E-value=11 Score=27.96 Aligned_cols=20 Identities=20% Similarity=0.642 Sum_probs=17.1
Q ss_pred cCCCHHHHHHHHHHhcCCCC
Q psy4209 824 HIKNIRRRRWLKAEVEKPNF 843 (856)
Q Consensus 824 HI~d~eer~WL~~riE~~~~ 843 (856)
|+++.+.+.|||+++|....
T Consensus 14 ~~q~~~R~~WLq~~L~~vHt 33 (39)
T 1bwx_A 14 HLNSMERVEWLRKKLQDVHN 33 (39)
T ss_dssp SCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhhc
Confidence 78999999999999986443
No 60
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=40.08 E-value=34 Score=31.44 Aligned_cols=40 Identities=23% Similarity=0.360 Sum_probs=33.0
Q ss_pred CCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCCCC
Q psy4209 44 GAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRHGH 88 (856)
Q Consensus 44 gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~GH 88 (856)
|+-.+...|+|.+|.-.|.++.+..+|+|.|-+ ||-+.|.
T Consensus 83 gvm~i~f~gddlea~ekalkemirqarkfagtv-----tytl~gn 122 (170)
T 4hhu_A 83 GVMVIVFEGDDLEALEKALKEMIRQARKFAGTV-----TYTLSGN 122 (170)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE-----EEEECSS
T ss_pred eEEEEEEecCcHHHHHHHHHHHHHHHHhhcceE-----EEEEeCC
Confidence 455677899999999999999999999999964 5655543
No 61
>2zzd_B Thiocyanate hydrolase subunit beta; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dd4_B 2dxb_B 2dd5_B* 2dxc_B*
Probab=38.35 E-value=46 Score=32.31 Aligned_cols=32 Identities=9% Similarity=0.194 Sum_probs=27.4
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q psy4209 112 FEKYTQKLLQEKVITEDMVTLEVQAYQQKLES 143 (856)
Q Consensus 112 ~~~~~~~Li~~G~~teeel~~i~~~~~~~v~~ 143 (856)
+..+.+-|++.|++|++|+++..++++++...
T Consensus 113 L~ALe~lLvekGvit~~EL~ar~aEv~ar~~~ 144 (157)
T 2zzd_B 113 LLTAARILVDKQFVTLTELHNKIVEMRERVAS 144 (157)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHhhhc
Confidence 46788889999999999999988888887654
No 62
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=34.01 E-value=48 Score=30.44 Aligned_cols=95 Identities=19% Similarity=0.184 Sum_probs=57.9
Q ss_pred CCcEEEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCCCCCCCCCCCCC-CHHHHHHHHhcCCHHHHHHHHHHHc
Q psy4209 44 GAPVFHVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRHGHNEGDDPSFT-QPLMYEKIKQTKPLFEKYTQKLLQE 122 (856)
Q Consensus 44 gip~~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~GHse~D~~~yr-~~~e~~~~~~~dpi~~~~~~~Li~~ 122 (856)
|+-.+...|+|.+|.-.|.++.+..+|+|.|-+ ||-+.|.---= ..+ -|+.+.+-. ..=.++|.++
T Consensus 2 gvm~i~f~gddlea~ekalkemirqarkfagtv-----tytl~gn~l~i--~itgvpeqvrkel------akeaerl~~e 68 (170)
T 4hhu_A 2 GVMVIVFEGDDLEALEKALKEMIRQARKFAGTV-----TYTLSGNRLVI--VITGVPEQVRKEL------AKEAERLKAE 68 (170)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE-----EEEEETTEEEE--EEESCCHHHHHHH------HHHHHHHHHH
T ss_pred ceEEEEEecCcHHHHHHHHHHHHHHHHhhcceE-----EEEEeCCEEEE--EEeCCcHHHHHHH------HHHHHHHHHh
Confidence 445678899999999999999999999999965 55554432100 000 122222111 1112233221
Q ss_pred --------------CC----CCHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4209 123 --------------KV----ITEDMVTLEVQAYQQKLESEYEKSKEA 151 (856)
Q Consensus 123 --------------G~----~teeel~~i~~~~~~~v~~a~~~A~~~ 151 (856)
|+ +.-++++++++..++.|.+|-+||-..
T Consensus 69 fni~v~y~imgsgsgvm~i~f~gddlea~ekalkemirqarkfagtv 115 (170)
T 4hhu_A 69 FNINVQYQIMGSGSGVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 115 (170)
T ss_dssp HTCEEEEEEECTTCCEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred cceEEEEEEEeCCceEEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 11 223678889999988888888876543
No 63
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=31.15 E-value=47 Score=27.29 Aligned_cols=36 Identities=19% Similarity=0.337 Sum_probs=30.4
Q ss_pred EEEeCCCHHHHHHHHHHHHHHHHccCCcEEEEEeeecCCCC
Q psy4209 48 FHVNADEPEVVVSIMKLLARYRQTFKRDAFIDIIGYRRHGH 88 (856)
Q Consensus 48 ~~VDG~D~~aV~~a~~~Av~~~R~g~gPvlIe~~tYR~~GH 88 (856)
++.-|+|.+|.-.|.++.+..+|+|.|-+ ||-+.|.
T Consensus 5 irfrgddleafekalkemirqarkfagtv-----tytldgn 40 (85)
T 2kl8_A 5 IRFRGDDLEAFEKALKEMIRQARKFAGTV-----TYTLDGN 40 (85)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTTTCEE-----EEEECSS
T ss_pred eeecCCcHHHHHHHHHHHHHHHHhhcceE-----EEEecCC
Confidence 56789999999999999999999999954 6666553
No 64
>1et1_A Parathyroid hormone; helical dimer, hormone/growth factor complex; 0.90A {Homo sapiens} SCOP: j.15.1.1 PDB: 1hpy_A 1zwa_A 1hph_A 1zwb_A 1zwd_A 1zwc_A 1zwe_A 1hth_A* 1fvy_A 3c4m_C*
Probab=23.83 E-value=15 Score=26.50 Aligned_cols=17 Identities=24% Similarity=0.827 Sum_probs=14.6
Q ss_pred cCCCHHHHHHHHHHhcC
Q psy4209 824 HIKNIRRRRWLKAEVEK 840 (856)
Q Consensus 824 HI~d~eer~WL~~riE~ 840 (856)
|+++.+.+.||++++|.
T Consensus 14 ~~q~~~R~~WLq~~l~~ 30 (34)
T 1et1_A 14 HLNSMERVEWLRKKLQD 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 57788999999999874
No 65
>2e62_A Protein AT5G25060; CWF21 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Arabidopsis thaliana}
Probab=23.57 E-value=1.5e+02 Score=24.14 Aligned_cols=33 Identities=15% Similarity=0.340 Sum_probs=28.8
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy4209 112 FEKYTQKLLQEKVITEDMVTLEVQAYQQKLESE 144 (856)
Q Consensus 112 ~~~~~~~Li~~G~~teeel~~i~~~~~~~v~~a 144 (856)
+..|++.|.++|..+.++++.-.+..++.+.+.
T Consensus 25 ~me~rD~LEeqG~~~~~eI~~kV~~~RkkL~~~ 57 (61)
T 2e62_A 25 LIEYRETLEEQGMKNPEEIERKVEINRKRLEVD 57 (61)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHh
Confidence 467999999999999999999999999888754
Done!