BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4210
(71 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q68EW0|OGDHL_XENLA 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Xenopus laevis
GN=ogdhl PE=2 SV=1
Length = 1018
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRI 38
+TL+L +NPSHLE V PV GKTKA QF D G+++
Sbjct: 361 ITLSLVANPSHLEAVDPVVQGKTKAEQFYRGDTEGNKV 398
>sp|Q5RCB8|ODO1_PONAB 2-oxoglutarate dehydrogenase, mitochondrial OS=Pongo abelii GN=OGDH
PE=2 SV=1
Length = 1023
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRIAHPKLSNSSLMITLGIGLPMFL 60
+TL+L +NPSHLE PV +GKTKA QF D G ++ L + GI F
Sbjct: 366 ITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFH 425
Query: 61 YTEI 64
+++
Sbjct: 426 LSDL 429
>sp|Q02218|ODO1_HUMAN 2-oxoglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=OGDH
PE=1 SV=3
Length = 1023
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRIAHPKLSNSSLMITLGIGLPMFL 60
+TL+L +NPSHLE PV +GKTKA QF D G ++ L + GI F
Sbjct: 366 ITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFH 425
Query: 61 YTEI 64
+++
Sbjct: 426 LSDL 429
>sp|Q5XI78|ODO1_RAT 2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus
GN=Ogdh PE=1 SV=1
Length = 1023
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRIAHPKLSNSSLMITLGIGLPMFL 60
+TL+L +NPSHLE PV +GKTKA QF D G ++ L + GI F
Sbjct: 366 ITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFH 425
Query: 61 YTEI 64
+++
Sbjct: 426 LSDL 429
>sp|Q60597|ODO1_MOUSE 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=Ogdh
PE=1 SV=3
Length = 1023
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRIAHPKLSNSSLMITLGIGLPMFL 60
+TL+L +NPSHLE PV +GKTKA QF D G ++ L + GI F
Sbjct: 366 ITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFH 425
Query: 61 YTEI 64
+++
Sbjct: 426 LSDL 429
>sp|Q60HE2|ODO1_MACFA 2-oxoglutarate dehydrogenase, mitochondrial OS=Macaca fascicularis
GN=OGDH PE=2 SV=1
Length = 1023
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRIAHPKLSNSSLMITLGIGLPMFL 60
+TL+L +NPSHLE PV +GKTKA QF D G ++ L + GI F
Sbjct: 366 ITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFH 425
Query: 61 YTEI 64
+++
Sbjct: 426 LSDL 429
>sp|Q148N0|ODO1_BOVIN 2-oxoglutarate dehydrogenase, mitochondrial OS=Bos taurus GN=OGDH
PE=2 SV=1
Length = 1023
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRIAHPKLSNSSLMITLGIGLPMFL 60
+TL+L +NPSHLE PV +GKTKA QF D G ++ L + GI F
Sbjct: 366 ITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFH 425
Query: 61 YTEI 64
+++
Sbjct: 426 LSDL 429
>sp|Q5R9L8|OGDHL_PONAB 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Pongo abelii
GN=OGDHL PE=2 SV=2
Length = 1010
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRI 38
+TL+L +NPSHLE V PV GKTKA QF D G ++
Sbjct: 353 ITLSLVANPSHLEAVDPVVQGKTKAEQFYRGDAQGKKV 390
>sp|Q9ULD0|OGDHL_HUMAN 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Homo sapiens
GN=OGDHL PE=1 SV=3
Length = 1010
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRI 38
+TL+L +NPSHLE V PV GKTKA QF D G ++
Sbjct: 353 ITLSLVANPSHLEAVDPVVQGKTKAEQFYRGDAQGKKV 390
>sp|Q6P6Z8|ODO1_XENLA 2-oxoglutarate dehydrogenase, mitochondrial OS=Xenopus laevis
GN=ogdh PE=2 SV=1
Length = 1021
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRI 38
+TL+L +NPSHLE PV GKTKA QF D G ++
Sbjct: 365 ITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKV 402
>sp|O74378|ODO1_SCHPO 2-oxoglutarate dehydrogenase, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=kgd1 PE=3 SV=1
Length = 1009
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNA 34
++L+L +NPSHLE PV LGK +A Q T+D A
Sbjct: 358 VSLSLVANPSHLEAEDPVVLGKVRAIQHYTSDEA 391
>sp|Q5L172|ODO1_GEOKA 2-oxoglutarate dehydrogenase E1 component OS=Geobacillus
kaustophilus (strain HTA426) GN=odhA PE=3 SV=1
Length = 950
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQ 27
M +TL++NPSHLE+V PV LG T+A Q
Sbjct: 320 MRITLANNPSHLEVVNPVVLGYTRAAQ 346
>sp|Q49XM5|ODO1_STAS1 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=odhA PE=3 SV=1
Length = 933
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFLTN 31
++L++NPSHLE+V PV LGKT+A Q T+
Sbjct: 309 ISLANNPSHLEIVAPVVLGKTRANQDTTD 337
>sp|C5D802|ODO1_GEOSW 2-oxoglutarate dehydrogenase E1 component OS=Geobacillus sp.
(strain WCH70) GN=odhA PE=3 SV=1
Length = 952
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQ 27
M +TL++NPSHLE+V PV LG T+A Q
Sbjct: 321 MRITLANNPSHLEVVNPVVLGFTRAAQ 347
>sp|A6WXF0|ODO1_OCHA4 2-oxoglutarate dehydrogenase E1 component OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=sucA PE=3
SV=1
Length = 1001
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFL 29
L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 357 LSLTANPSHLEIVNPVVMGKARAKQDL 383
>sp|Q8FYF7|ODO1_BRUSU 2-oxoglutarate dehydrogenase E1 component OS=Brucella suis biovar 1
(strain 1330) GN=sucA PE=3 SV=1
Length = 1004
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFL 29
L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 361 LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|B0CIS7|ODO1_BRUSI 2-oxoglutarate dehydrogenase E1 component OS=Brucella suis (strain
ATCC 23445 / NCTC 10510) GN=sucA PE=3 SV=1
Length = 1004
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFL 29
L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 361 LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|A5VSQ0|ODO1_BRUO2 2-oxoglutarate dehydrogenase E1 component OS=Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512) GN=sucA PE=3 SV=1
Length = 1004
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFL 29
L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 361 LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|Q8YJE4|ODO1_BRUME 2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=sucA
PE=3 SV=1
Length = 1004
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFL 29
L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 361 LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|C0RFG8|ODO1_BRUMB 2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis
biotype 2 (strain ATCC 23457) GN=sucA PE=3 SV=1
Length = 1004
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFL 29
L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 361 LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|A9M8Q9|ODO1_BRUC2 2-oxoglutarate dehydrogenase E1 component OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=sucA PE=3 SV=1
Length = 1004
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFL 29
L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 361 LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|Q57AX5|ODO1_BRUAB 2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus
biovar 1 (strain 9-941) GN=sucA PE=3 SV=1
Length = 1004
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFL 29
L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 361 LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|Q2YLS2|ODO1_BRUA2 2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus
(strain 2308) GN=sucA PE=3 SV=1
Length = 1004
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFL 29
L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 361 LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|B2S877|ODO1_BRUA1 2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus
(strain S19) GN=sucA PE=3 SV=1
Length = 1004
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFL 29
L+L++NPSHLE+V PV +GK +A Q L
Sbjct: 361 LSLTANPSHLEIVNPVVMGKARAKQDL 387
>sp|Q4L6C4|ODO1_STAHJ 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=odhA PE=3 SV=1
Length = 934
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 22/25 (88%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
++L++NPSHLE+V PV +GKT+A Q
Sbjct: 311 ISLANNPSHLEIVAPVVIGKTRASQ 335
>sp|Q1RHI4|ODO1_RICBR 2-oxoglutarate dehydrogenase E1 component OS=Rickettsia bellii
(strain RML369-C) GN=sucA PE=3 SV=1
Length = 927
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRI 38
L+L+ NPSHLE V P+ GK +A Q + DN ++
Sbjct: 307 LSLADNPSHLEAVNPIFAGKVRAKQDMLKDNKRSKV 342
>sp|P45303|ODO1_HAEIN 2-oxoglutarate dehydrogenase E1 component OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=sucA PE=3
SV=1
Length = 935
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRI 38
LTL+ NPSHLE+V PV +G ++ Q ND ++
Sbjct: 317 LTLAFNPSHLEIVSPVVIGSVRSRQTRMNDTEHSKV 352
>sp|O61199|ODO1_CAEEL 2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis
elegans GN=T22B11.5 PE=1 SV=2
Length = 1029
Score = 36.2 bits (82), Expect = 0.057, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRIAHPKLSNSSLMITLGIGLPMF 59
+ + + +NPSHLE V PV +GK +A F D DR L + G+ L F
Sbjct: 370 VKIAVVANPSHLEAVDPVVMGKVRAEAFYAGDEKCDRTMAILLHGDAAFAGQGVVLETF 428
>sp|Q54VG0|DHTK1_DICDI Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog,
mitochondrial OS=Dictyostelium discoideum GN=odhA PE=3
SV=1
Length = 900
Score = 36.2 bits (82), Expect = 0.061, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAG 35
++L NPSHLE V PV GKT+A QF + G
Sbjct: 261 VSLIHNPSHLEAVDPVAAGKTRAKQFYEKNEGG 293
>sp|Q623T0|ODO1_CAEBR 2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis
briggsae GN=CBG01737 PE=3 SV=1
Length = 1027
Score = 36.2 bits (82), Expect = 0.061, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRIAHPKLSNSSLMITLGIGLPMF 59
+ + + +NPSHLE V PV +GK +A F D DR L + G+ L F
Sbjct: 368 VKIAVVANPSHLEAVDPVVMGKVRAEAFYAGDEKCDRTMAILLHGDAAFAGQGVVLETF 426
>sp|Q89AJ7|ODO1_BUCBP Oxoglutarate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=sucA PE=3 SV=1
Length = 916
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 1 MTLTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDR 37
+ L L SNPSHLE++ PV +G ++A+ +NDN D
Sbjct: 293 IILDLKSNPSHLEVINPVVVGSSRAY-IDSNDNLNDE 328
>sp|Q5HPC6|ODO1_STAEQ 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=odhA PE=3
SV=1
Length = 934
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAG 35
++L++NPSHLE+V PV GKT+A Q T+ G
Sbjct: 311 ISLANNPSHLEIVAPVVAGKTRAAQDNTHQVGG 343
>sp|Q8CP83|ODO1_STAES 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=odhA PE=3 SV=1
Length = 934
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 21/25 (84%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
++L++NPSHLE+V PV GKT+A Q
Sbjct: 311 ISLANNPSHLEIVAPVVAGKTRAAQ 335
>sp|P20707|ODO1_AZOVI 2-oxoglutarate dehydrogenase E1 component OS=Azotobacter vinelandii
GN=sucA PE=3 SV=1
Length = 943
Score = 35.4 bits (80), Expect = 0.096, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRIAHPKLSNSSLMITLGIGLPMFLYT 62
L ++ NPSHLE+V PV G +A Q D G+++ + S G+ + F +
Sbjct: 320 LAMAFNPSHLEIVSPVVEGSVRARQDRRVDATGEKVVPISIHGDSAFAGQGVVMETFQMS 379
Query: 63 EI 64
+I
Sbjct: 380 QI 381
>sp|Q6GGZ5|ODO1_STAAR 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain MRSA252) GN=odhA PE=3 SV=1
Length = 932
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|Q8NWR6|ODO1_STAAW 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain MW2) GN=odhA PE=3 SV=1
Length = 932
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|P0C601|ODO1_STAAU 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
GN=odhA PE=3 SV=1
Length = 932
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|Q99U74|ODO1_STAAN 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain N315) GN=odhA PE=1 SV=1
Length = 910
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 286 IALANNPSHLEIVAPVVEGRTRAAQ 310
>sp|Q931R8|ODO1_STAAM 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=odhA PE=1 SV=2
Length = 932
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|A5ISU5|ODO1_STAA9 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain JH9) GN=odhA PE=3 SV=1
Length = 932
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|A6U1N4|ODO1_STAA2 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain JH1) GN=odhA PE=3 SV=1
Length = 932
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|A7X295|ODO1_STAA1 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain Mu3 / ATCC 700698) GN=odhA PE=3 SV=1
Length = 932
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|A8Z3Z0|ODO1_STAAT 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain USA300 / TCH1516) GN=odhA PE=3 SV=1
Length = 932
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|Q6G9E8|ODO1_STAAS 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain MSSA476) GN=odhA PE=3 SV=1
Length = 932
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|A6QGW6|ODO1_STAAE 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain Newman) GN=odhA PE=3 SV=1
Length = 932
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|Q5HG06|ODO1_STAAC 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain COL) GN=odhA PE=3 SV=1
Length = 932
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|Q2YY05|ODO1_STAAB 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=odhA PE=3 SV=1
Length = 932
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|Q2FYM1|ODO1_STAA8 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain NCTC 8325) GN=odhA PE=3 SV=1
Length = 932
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|Q2FH25|ODO1_STAA3 2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus
(strain USA300) GN=odhA PE=3 SV=1
Length = 932
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQ 27
+ L++NPSHLE+V PV G+T+A Q
Sbjct: 308 IALANNPSHLEIVAPVVEGRTRAAQ 332
>sp|Q4UKI8|ODO1_RICFE 2-oxoglutarate dehydrogenase E1 component OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sucA PE=3 SV=2
Length = 977
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 3 LTLSSNPSHLELVYPVNLGKTKAFQFLTNDNAGDRI 38
L+L+ NPSHLE V P+ GK +A Q + D ++
Sbjct: 358 LSLADNPSHLEAVNPIVAGKVRAKQDILGDTKRSKV 393
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,843,974
Number of Sequences: 539616
Number of extensions: 776027
Number of successful extensions: 1314
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1213
Number of HSP's gapped (non-prelim): 103
length of query: 71
length of database: 191,569,459
effective HSP length: 43
effective length of query: 28
effective length of database: 168,365,971
effective search space: 4714247188
effective search space used: 4714247188
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)