Your job contains 1 sequence.
>psy4218
MASTSTNVPVSEILRTKASEDDEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDINP
HIPQYISSAPWYFGSKGPTLQHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACEN
CGAMTHKKKDCLERPRKVLAKYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIV
EHYQKIEEAKRELRADKLDAGVSIDNRGSKEGDEDKDDLEEDEDKYVDEVDMPGTKVDSK
QRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVANPEDVDYAGENFVRFS
GDTRKHATAQLFAWEAYEKGVDVHVLAEPTKLELLKKEYEEKKEEFKKEVSSSVIDKYGG
AEHLQAPPKALLLAQTEDYVEYSRYGKVIKMYIPTIIPVYGGPGGIMECGDTREAGLATS
SVVGASLGPPPGIMNRPEHQDEDEEDSGHKKQKKNKKSKKKKKEKEKSAEEKMKEALKKE
EEEQREADRLLRMDERKRSYNSMISVKEPTMDSDRGNCNC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4218
(520 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039626 - symbol:Slu7 "Slu7" species:7227 "Drosoph... 1150 2.2e-122 2
UNIPROTKB|F1NNB9 - symbol:SLU7 "Pre-mRNA-splicing factor ... 1071 1.6e-113 2
UNIPROTKB|Q5ZIG2 - symbol:SLU7 "Pre-mRNA-splicing factor ... 1071 1.6e-113 2
ZFIN|ZDB-GENE-041114-62 - symbol:slu7 "SLU7 splicing fact... 1054 1.1e-112 2
UNIPROTKB|F1NRP0 - symbol:SLU7 "Pre-mRNA-splicing factor ... 1054 1.0e-111 2
UNIPROTKB|O95391 - symbol:SLU7 "Pre-mRNA-splicing factor ... 1053 1.3e-111 2
UNIPROTKB|Q3ZBE5 - symbol:SLU7 "Pre-mRNA-splicing factor ... 1054 1.6e-111 2
UNIPROTKB|E2RRD5 - symbol:SLU7 "Uncharacterized protein" ... 1053 2.1e-111 2
UNIPROTKB|F1RR54 - symbol:SLU7 "Uncharacterized protein" ... 1053 2.1e-111 2
MGI|MGI:2385598 - symbol:Slu7 "SLU7 splicing factor homol... 1053 2.1e-111 2
RGD|631432 - symbol:Slu7 "SLU7 splicing factor homolog (S... 1052 2.7e-111 2
WB|WBGene00010629 - symbol:K07C5.6 species:6239 "Caenorha... 881 3.2e-88 1
DICTYBASE|DDB_G0281901 - symbol:slu7 "putative RNA splici... 813 5.2e-81 1
TAIR|locus:2018496 - symbol:SMP1 "SWELLMAP 1" species:370... 730 1.8e-74 2
TAIR|locus:2115115 - symbol:SMP2 "SWELLMAP 2" species:370... 696 6.8e-71 2
TAIR|locus:2077157 - symbol:AT3G45950 species:3702 "Arabi... 616 3.9e-60 1
GENEDB_PFALCIPARUM|PFF0500c - symbol:PFF0500c "step II sp... 325 6.9e-53 2
UNIPROTKB|C6KSU8 - symbol:PFF0500c "Step II splicing fact... 325 6.9e-53 2
UNIPROTKB|Q51LA6 - symbol:SLU7 "Pre-mRNA-splicing factor ... 329 2.6e-51 2
ASPGD|ASPL0000074217 - symbol:AN4788 species:162425 "Emer... 505 2.3e-48 1
POMBASE|SPBC365.05c - symbol:slu7 "splicing factor Slu7" ... 335 6.0e-48 2
UNIPROTKB|E5RK41 - symbol:SLU7 "Pre-mRNA-splicing factor ... 465 3.9e-44 1
SGD|S000002495 - symbol:SLU7 "RNA splicing factor" specie... 158 1.1e-10 2
>FB|FBgn0039626 [details] [associations]
symbol:Slu7 "Slu7" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
EMBL:AE014297 GO:GO:0007052 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0005681 GO:GO:0000389 eggNOG:NOG251791
KO:K12819 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708 CTD:10569
GeneTree:ENSGT00390000002292 GO:GO:0030628 EMBL:AY061470
RefSeq:NP_651659.2 UniGene:Dm.3588 IntAct:Q9VAQ7 MINT:MINT-806770
STRING:Q9VAQ7 PaxDb:Q9VAQ7 EnsemblMetazoa:FBtr0085418 GeneID:43427
KEGG:dme:Dmel_CG1420 UCSC:CG1420-RA FlyBase:FBgn0039626
InParanoid:Q9VAQ7 OrthoDB:EOG4JDFP0 PhylomeDB:Q9VAQ7
GenomeRNAi:43427 NextBio:833867 Bgee:Q9VAQ7 Uniprot:Q9VAQ7
Length = 574
Score = 1150 (409.9 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
Identities = 232/396 (58%), Positives = 276/396 (69%)
Query: 1 MASTSTNVPVSEILRTKASED--DEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDI 58
M+S PVS+I+ +K +D +EPKKKSREDWRKAKELEEARKAGTAPAAVDE GRDI
Sbjct: 1 MSSGPMRTPVSQIILSKHDQDAEEEPKKKSREDWRKAKELEEARKAGTAPAAVDEEGRDI 60
Query: 59 NPHIPQYISSAPWYFGSKGPTLQHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGAC 118
NPHIPQYIS+APWY+GS GPTL+HQR P E + LD+ +G++T KFRKGAC
Sbjct: 61 NPHIPQYISNAPWYYGSAGPTLKHQR--PQHEDEQGQLDKRAPKGLNTARIITKFRKGAC 118
Query: 119 ENCGAMTHKKKDCLERPRKVLAKYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKA 178
ENCGA+THK+KDCLERPRKV AKY+ + + DE + + +YD KRDRW+ YDP+NH+
Sbjct: 119 ENCGAVTHKRKDCLERPRKVQAKYAESIVVHDEHLVNEAAVNYDEKRDRWSSYDPANHRE 178
Query: 179 IVEHYQKIEEAKRELRADKL----DAGVSIDNRGSXXXXXXXXXXXXXXXXXXXXXXMPG 234
I+E Y+K+EEAKR+L+A+KL DA +S D G+ MPG
Sbjct: 179 IIEEYEKVEEAKRQLKAEKLKNDPDAEIS-DEEGNEDKYVDEVD-------------MPG 224
Query: 235 TKVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVANPEDVDYAGE 294
TKVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNP V E+ ++AGE
Sbjct: 225 TKVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPNPAVPE-EEAEFAGE 283
Query: 295 NFVRFSGDTRKHATAQLFAWEAYEKGVDVHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSV 354
NFVRFSGDT ATAQLFAWEA+ KGVDVH+LAEPT + +
Sbjct: 284 NFVRFSGDTTAQATAQLFAWEAHGKGVDVHLLAEPTKLELLQKEYEQKKEQFKSSTKTHI 343
Query: 355 IDKYGGAEHXXXXXXXXXXXXTEDYVEYSRYGKVIK 390
++KYGG EH TE+Y+EYSR GKVIK
Sbjct: 344 VEKYGGEEHLQVPPKSLLLAQTEEYIEYSRSGKVIK 379
Score = 74 (31.1 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 485 READRLLRMDERKRSYNSMISVKEPTMD 512
+E D +D+RKR+YNSM VK PT D
Sbjct: 527 KEKDIPEELDDRKRAYNSMYDVKAPTED 554
>UNIPROTKB|F1NNB9 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
SMART:SM00343 GO:GO:0008270 GO:GO:0003676 InterPro:IPR021715
Pfam:PF11708 GeneTree:ENSGT00390000002292 IPI:IPI00600893
EMBL:AADN02035864 Ensembl:ENSGALT00000041066 ArrayExpress:F1NNB9
Uniprot:F1NNB9
Length = 564
Score = 1071 (382.1 bits), Expect = 1.6e-113, Sum P(2) = 1.6e-113
Identities = 210/371 (56%), Positives = 248/371 (66%)
Query: 22 DEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYISSAPWYFG-SKGPTL 80
+EPKK +REDWRK KELEE RK G APA VDE G+DINPHIPQYISS PWY SK PTL
Sbjct: 21 EEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTL 80
Query: 81 QHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDCLERPRKVLA 140
+HQR QP+++K +S +WYKRGV S A ++RKGACENCGA+THKKKDC+ERPRKV A
Sbjct: 81 KHQRPQPEKQKQYSSSGDWYKRGVKEHSIATRYRKGACENCGALTHKKKDCMERPRKVGA 140
Query: 141 KYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKRELRADKLDA 200
KY+ IA DE VQP+L+ DYD KRDRW GY+P H IVE Y K++ AKR L+A KL
Sbjct: 141 KYTGMNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYAKVDLAKRTLKAQKLQE 200
Query: 201 GVSIDNRGSXXXXXXXXXXXXXXXXXXXXXXMPGTKVDSKQRITVRNLRIREDTAKYLRN 260
++ MPG DSK+RITVRNLRIRED AKYLRN
Sbjct: 201 ELASGKLEQVERDHNSEDEDEDKYADDID--MPGQNFDSKRRITVRNLRIREDIAKYLRN 258
Query: 261 LDPNSAYYDPKTRSMRDNPY-ETVANPEDVDYAGENFVRFSGDTRKHATAQLFAWEAYEK 319
LDPNSAYYDPKTR+MR+NPY T NP++V YAG+NFVR++GDT A QLFAWEAY+K
Sbjct: 259 LDPNSAYYDPKTRAMRENPYANTGKNPDEVGYAGDNFVRYTGDTISMAQTQLFAWEAYDK 318
Query: 320 GVDVHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVIDKYGGAEHXXXXXXXXXXXXTEDY 379
G +VH+ A+PT S+++KYGG EH TEDY
Sbjct: 319 GSEVHLQADPTKLELLYKSFKVKKEDFKAQQKESILEKYGGQEHLDAPPAELLLAQTEDY 378
Query: 380 VEYSRYGKVIK 390
VEYSR+G VIK
Sbjct: 379 VEYSRHGTVIK 389
Score = 69 (29.3 bits), Expect = 1.6e-113, Sum P(2) = 1.6e-113
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 486 EADRLLRMDERKRSYNSMISVKEPT 510
+ ++++DERKR YNS+ +EPT
Sbjct: 516 QVKEIMQLDERKRPYNSVYETREPT 540
>UNIPROTKB|Q5ZIG2 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008380
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 eggNOG:NOG251791 HOGENOM:HOG000194391 KO:K12819
InterPro:IPR021715 Pfam:PF11708 CTD:10569 HOVERGEN:HBG053287
OrthoDB:EOG42RD76 EMBL:AJ720822 IPI:IPI00600893
RefSeq:NP_001006146.1 UniGene:Gga.20067 STRING:Q5ZIG2 PRIDE:Q5ZIG2
GeneID:416157 KEGG:gga:416157 NextBio:20819662 Uniprot:Q5ZIG2
Length = 564
Score = 1071 (382.1 bits), Expect = 1.6e-113, Sum P(2) = 1.6e-113
Identities = 210/371 (56%), Positives = 248/371 (66%)
Query: 22 DEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYISSAPWYFG-SKGPTL 80
+EPKK +REDWRK KELEE RK G APA VDE G+DINPHIPQYISS PWY SK PTL
Sbjct: 21 EEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTL 80
Query: 81 QHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDCLERPRKVLA 140
+HQR QP+++K +S +WYKRGV S A ++RKGACENCGA+THKKKDC+ERPRKV A
Sbjct: 81 KHQRPQPEKQKQYSSSGDWYKRGVKEHSIATRYRKGACENCGALTHKKKDCMERPRKVGA 140
Query: 141 KYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKRELRADKLDA 200
KY+ IA DE VQP+L+ DYD KRDRW GY+P H IVE Y K++ AKR L+A KL
Sbjct: 141 KYTGMNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYAKVDLAKRTLKAQKLQE 200
Query: 201 GVSIDNRGSXXXXXXXXXXXXXXXXXXXXXXMPGTKVDSKQRITVRNLRIREDTAKYLRN 260
++ MPG DSK+RITVRNLRIRED AKYLRN
Sbjct: 201 ELASGKLEQVERDHNSEDEDEDKYADDID--MPGQNFDSKRRITVRNLRIREDIAKYLRN 258
Query: 261 LDPNSAYYDPKTRSMRDNPY-ETVANPEDVDYAGENFVRFSGDTRKHATAQLFAWEAYEK 319
LDPNSAYYDPKTR+MR+NPY T NP++V YAG+NFVR++GDT A QLFAWEAY+K
Sbjct: 259 LDPNSAYYDPKTRAMRENPYANTGKNPDEVGYAGDNFVRYTGDTISMAQTQLFAWEAYDK 318
Query: 320 GVDVHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVIDKYGGAEHXXXXXXXXXXXXTEDY 379
G +VH+ A+PT S+++KYGG EH TEDY
Sbjct: 319 GSEVHLQADPTKLELLYKSFKVKKEDFKAQQKESILEKYGGQEHLDAPPAELLLAQTEDY 378
Query: 380 VEYSRYGKVIK 390
VEYSR+G VIK
Sbjct: 379 VEYSRHGTVIK 389
Score = 69 (29.3 bits), Expect = 1.6e-113, Sum P(2) = 1.6e-113
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 486 EADRLLRMDERKRSYNSMISVKEPT 510
+ ++++DERKR YNS+ +EPT
Sbjct: 516 QVKEIMQLDERKRPYNSVYETREPT 540
>ZFIN|ZDB-GENE-041114-62 [details] [associations]
symbol:slu7 "SLU7 splicing factor homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR001878 SMART:SM00343
ZFIN:ZDB-GENE-041114-62 GO:GO:0008270 GO:GO:0003676
InterPro:IPR021715 Pfam:PF11708 GeneTree:ENSGT00390000002292
EMBL:AL929007 IPI:IPI00486196 Ensembl:ENSDART00000145241
ArrayExpress:F1RCR0 Bgee:F1RCR0 Uniprot:F1RCR0
Length = 619
Score = 1054 (376.1 bits), Expect = 1.1e-112, Sum P(2) = 1.1e-112
Identities = 215/387 (55%), Positives = 249/387 (64%)
Query: 17 KASED----DEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYISSAPWY 72
KASE +EPKK +REDWRK KELEE RK G APA VDE G+DINPHIPQYISS PWY
Sbjct: 55 KASEGMVDLEEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWY 114
Query: 73 FG-SKGPTLQHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDC 131
SK PTL+HQR Q + + A + +WYKRGV S K+RKGACENCGA+THKKKDC
Sbjct: 115 IDPSKRPTLKHQRPQEENQSKFAPIGDWYKRGVQEKSVNTKYRKGACENCGALTHKKKDC 174
Query: 132 LERPRKVLAKYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKR 191
LERPRKV AK+S IA DE Q +L DYD KRDRW GYDP H IVE Y K++ AKR
Sbjct: 175 LERPRKVGAKFSGTGIAPDEHQQVQLSMDYDGKRDRWNGYDPDEHMRIVEEYSKVDLAKR 234
Query: 192 ELRADKLD----AGVSIDNRGSXXXXXXXXXXXXXXXXXXXXXX---MPGTKVDSKQRIT 244
L+A KL +G +D S MPG DSK+RIT
Sbjct: 235 TLKAQKLQEELASGKLMDQANSRKHEEAVQDHSSEDEDEDKYVDDFDMPGQNFDSKRRIT 294
Query: 245 VRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYE-TVANPEDVDYAGENFVRFSGDT 303
VRNLRIRED AKYLRNLDPNSAYYDPKTR+MR+NPY T NPE+V YAG+NFVR+SGDT
Sbjct: 295 VRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYSNTGKNPEEVGYAGDNFVRYSGDT 354
Query: 304 RKHATAQLFAWEAYEKGVDVHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVIDKYGGAEH 363
A QLFAWEAYEKG +VH+ A+PT ++++KYGG+EH
Sbjct: 355 ISMAQTQLFAWEAYEKGSEVHLQADPTKLELLHQSYKVKKDDFKEKQKETILEKYGGSEH 414
Query: 364 XXXXXXXXXXXXTEDYVEYSRYGKVIK 390
TE+YVEYSR+G V+K
Sbjct: 415 LDAPPRELLLAQTEEYVEYSRHGAVLK 441
Score = 78 (32.5 bits), Expect = 1.1e-112, Sum P(2) = 1.1e-112
Identities = 13/26 (50%), Positives = 21/26 (80%)
Query: 485 READRLLRMDERKRSYNSMISVKEPT 510
++ L+++DERKR YNS++ V+EPT
Sbjct: 570 KQVAELMQVDERKRPYNSLMEVREPT 595
>UNIPROTKB|F1NRP0 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000380 "alternative mRNA splicing, via spliceosome"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=IEA] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=IEA] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] InterPro:IPR001878 SMART:SM00343
GO:GO:0005737 GO:GO:0006886 GO:GO:0033554 GO:GO:0016607
GO:GO:0008270 GO:GO:0071013 GO:GO:0030532 GO:GO:0000380
GO:GO:0000389 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708
GeneTree:ENSGT00390000002292 GO:GO:0030628 GO:GO:0000386
EMBL:AADN02035864 IPI:IPI00818963 Ensembl:ENSGALT00000002279
ArrayExpress:F1NRP0 Uniprot:F1NRP0
Length = 582
Score = 1054 (376.1 bits), Expect = 1.0e-111, Sum P(2) = 1.0e-111
Identities = 212/385 (55%), Positives = 250/385 (64%)
Query: 22 DEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYISSAPWYFG-SKGPTL 80
+EPKK +REDWRK KELEE RK G APA VDE G+DINPHIPQYISS PWY SK PTL
Sbjct: 23 EEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTL 82
Query: 81 QHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDCLERPRKVLA 140
+HQR QP+++K +S +WYKRGV S A ++RKGACENCGA+THKKKDC+ERPRKV A
Sbjct: 83 KHQRPQPEKQKQYSSSGDWYKRGVKEHSIATRYRKGACENCGALTHKKKDCMERPRKVGA 142
Query: 141 KYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKRELRADKLD- 199
KY+ IA DE VQP+L+ DYD KRDRW GY+P H IVE Y K++ AKR L+A KL
Sbjct: 143 KYTGMNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYAKVDLAKRTLKAQKLQE 202
Query: 200 --AGVSIDNRGS-----------XXXXXXXXXXXXXXXXXXXXXXMPGTKVDSKQRITVR 246
A ++ S MPG DSK+RITVR
Sbjct: 203 ELASGKLEQVNSPRHQWGEEEPNSQTERDHNSEDEDEDKYADDIDMPGQNFDSKRRITVR 262
Query: 247 NLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPY-ETVANPEDVDYAGENFVRFSGDTRK 305
NLRIRED AKYLRNLDPNSAYYDPKTR+MR+NPY T NP++V YAG+NFVR++GDT
Sbjct: 263 NLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANTGKNPDEVGYAGDNFVRYTGDTIS 322
Query: 306 HATAQLFAWEAYEKGVDVHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVIDKYGGAEHXX 365
A QLFAWEAY+KG +VH+ A+PT S+++KYGG EH
Sbjct: 323 MAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKAQQKESILEKYGGQEHLD 382
Query: 366 XXXXXXXXXXTEDYVEYSRYGKVIK 390
TEDYVEYSR+G VIK
Sbjct: 383 APPAELLLAQTEDYVEYSRHGTVIK 407
Score = 69 (29.3 bits), Expect = 1.0e-111, Sum P(2) = 1.0e-111
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 486 EADRLLRMDERKRSYNSMISVKEPT 510
+ ++++DERKR YNS+ +EPT
Sbjct: 534 QVKEIMQLDERKRPYNSVYETREPT 558
>UNIPROTKB|O95391 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006886 "intracellular protein
transport" evidence=IDA] [GO:0033554 "cellular response to stress"
evidence=IDA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IDA] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=IDA] [GO:0016607 "nuclear speck"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=IDA]
[GO:0030628 "pre-mRNA 3'-splice site binding" evidence=IDA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0005737
GO:GO:0006886 EMBL:CH471062 GO:GO:0033554 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 GO:GO:0071013 GO:GO:0030532
EMBL:AC091842 GO:GO:0000380 GO:GO:0000389 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 OMA:PQTLMEM InterPro:IPR021715
Pfam:PF11708 CTD:10569 HOVERGEN:HBG053287 OrthoDB:EOG42RD76
GO:GO:0030628 GO:GO:0000386 EMBL:AF101074 EMBL:BC010634
EMBL:AY486334 EMBL:DQ174516 EMBL:DQ174517 IPI:IPI00294435
RefSeq:NP_006416.3 UniGene:Hs.435342 IntAct:O95391
MINT:MINT-1467161 STRING:O95391 PhosphoSite:O95391 PaxDb:O95391
PRIDE:O95391 DNASU:10569 Ensembl:ENST00000297151
Ensembl:ENST00000520664 GeneID:10569 KEGG:hsa:10569 UCSC:uc003lyg.3
GeneCards:GC05M159762 HGNC:HGNC:16939 HPA:HPA035907 MIM:605974
neXtProt:NX_O95391 PharmGKB:PA128394574 InParanoid:O95391
PhylomeDB:O95391 ChiTaRS:SLU7 GenomeRNAi:10569 NextBio:40113
PMAP-CutDB:O95391 ArrayExpress:O95391 Bgee:O95391 CleanEx:HS_SLU7
Genevestigator:O95391 Uniprot:O95391
Length = 586
Score = 1053 (375.7 bits), Expect = 1.3e-111, Sum P(2) = 1.3e-111
Identities = 215/408 (52%), Positives = 258/408 (63%)
Query: 1 MASTSTN-VPVSEILRTKASEDDEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDIN 59
M++T + V + + +K +EPKK +REDWRK KELEE RK G APA VDE G+DIN
Sbjct: 1 MSATVVDAVNAAPLSGSKEMSLEEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDIN 60
Query: 60 PHIPQYISSAPWYFG-SKGPTLQHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGAC 118
PHIPQYISS PWY SK PTL+HQR QP+++K +S EWYKRGV S K+RKGAC
Sbjct: 61 PHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSIITKYRKGAC 120
Query: 119 ENCGAMTHKKKDCLERPRKVLAKYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKA 178
ENCGAMTHKKKDC ERPR+V AK++ IA DE VQP+L+ DYD KRDRW GY+P H
Sbjct: 121 ENCGAMTHKKKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMK 180
Query: 179 IVEHYQKIEEAKRELRADKLD----AGVSIDNRGS-----------XXXXXXXXXXXXXX 223
IVE Y K++ AKR L+A KL +G ++ S
Sbjct: 181 IVEEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQMEKDHNSEDEDE 240
Query: 224 XXXXXXXXMPGTKVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETV 283
MPG DSK+RITVRNLRIRED AKYLRNLDPNSAYYDPKTR+MR+NPY
Sbjct: 241 DKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANA 300
Query: 284 A-NPEDVDYAGENFVRFSGDTRKHATAQLFAWEAYEKGVDVHVLAEPTXXXXXXXXXXXX 342
NP++V YAG+NFVR++GDT A QLFAWEAY+KG +VH+ A+PT
Sbjct: 301 GKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVK 360
Query: 343 XXXXXXXVSSSVIDKYGGAEHXXXXXXXXXXXXTEDYVEYSRYGKVIK 390
S+++KYGG EH TEDYVEYSR+G VIK
Sbjct: 361 KEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIK 408
Score = 69 (29.3 bits), Expect = 1.3e-111, Sum P(2) = 1.3e-111
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 491 LRMDERKRSYNSMISVKEPT 510
+++DERKR YNSM +EPT
Sbjct: 543 MQIDERKRPYNSMYETREPT 562
>UNIPROTKB|Q3ZBE5 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0033554 "cellular
response to stress" evidence=IEA] [GO:0030628 "pre-mRNA 3'-splice
site binding" evidence=IEA] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
GO:GO:0005737 GO:GO:0006886 GO:GO:0033554 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 GO:GO:0071013 GO:GO:0030532
GO:GO:0000380 GO:GO:0000389 eggNOG:NOG251791 HOGENOM:HOG000194391
KO:K12819 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708 EMBL:BC103394
IPI:IPI00709999 RefSeq:NP_001160089.1 UniGene:Bt.105667
STRING:Q3ZBE5 PRIDE:Q3ZBE5 Ensembl:ENSBTAT00000011131 GeneID:512318
KEGG:bta:512318 CTD:10569 GeneTree:ENSGT00390000002292
HOVERGEN:HBG053287 InParanoid:Q3ZBE5 OrthoDB:EOG42RD76
NextBio:20870335 GO:GO:0030628 GO:GO:0000386 Uniprot:Q3ZBE5
Length = 586
Score = 1054 (376.1 bits), Expect = 1.6e-111, Sum P(2) = 1.6e-111
Identities = 211/386 (54%), Positives = 248/386 (64%)
Query: 22 DEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYISSAPWYFG-SKGPTL 80
+EPKK +REDWRK KELEE RK G APA VDE G+DINPHIPQYISS PWY SK PTL
Sbjct: 23 EEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTL 82
Query: 81 QHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDCLERPRKVLA 140
+HQR QP+++K +S EWYKRGV S K+RKGACENCGAMTHKKKDC ERPR+V A
Sbjct: 83 KHQRPQPEKQKQYSSSGEWYKRGVKENSITTKYRKGACENCGAMTHKKKDCFERPRRVGA 142
Query: 141 KYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKRELRADKLD- 199
K++ IA DE VQP+L+ DYD KRDRW GY+P H IVE Y K++ AKR L+A KL
Sbjct: 143 KFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYAKVDLAKRTLKAQKLQE 202
Query: 200 ---AGVSIDNRGS-----------XXXXXXXXXXXXXXXXXXXXXXMPGTKVDSKQRITV 245
+G ++ S MPG DSK+RITV
Sbjct: 203 ELASGKLVEQANSPKHQWGEEEPNSQTEKDHNSEDEDEDKYADDIDMPGQNFDSKRRITV 262
Query: 246 RNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVA-NPEDVDYAGENFVRFSGDTR 304
RNLRIRED AKYLRNLDPNSAYYDPKTR+MR+NPY NP++V YAG+NFVR++GDT
Sbjct: 263 RNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGKNPDEVSYAGDNFVRYTGDTI 322
Query: 305 KHATAQLFAWEAYEKGVDVHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVIDKYGGAEHX 364
A QLFAWEAY+KG +VH+ A+PT S+++KYGG EH
Sbjct: 323 SMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKEQQKESILEKYGGQEHL 382
Query: 365 XXXXXXXXXXXTEDYVEYSRYGKVIK 390
TEDYVEYSR+G VIK
Sbjct: 383 DAPPAELLLAQTEDYVEYSRHGTVIK 408
Score = 67 (28.6 bits), Expect = 1.6e-111, Sum P(2) = 1.6e-111
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 490 LLRMDERKRSYNSMISVKEPT 510
++++DERKR YNS+ +EPT
Sbjct: 542 IMQIDERKRPYNSIYETREPT 562
>UNIPROTKB|E2RRD5 [details] [associations]
symbol:SLU7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0030628 "pre-mRNA 3'-splice site binding"
evidence=IEA] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=IEA] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IEA] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
SMART:SM00343 GO:GO:0005737 GO:GO:0006886 GO:GO:0033554
GO:GO:0016607 GO:GO:0008270 GO:GO:0071013 GO:GO:0030532
GO:GO:0000380 GO:GO:0000389 KO:K12819 OMA:PQTLMEM
InterPro:IPR021715 Pfam:PF11708 CTD:10569
GeneTree:ENSGT00390000002292 GO:GO:0030628 GO:GO:0000386
EMBL:AAEX03003047 RefSeq:XP_536446.2 Ensembl:ENSCAFT00000027355
GeneID:479308 KEGG:cfa:479308 Uniprot:E2RRD5
Length = 633
Score = 1053 (375.7 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 211/386 (54%), Positives = 248/386 (64%)
Query: 22 DEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYISSAPWYFG-SKGPTL 80
+EPKK +REDWRK KELEE RK G APA VDE G+DINPHIPQYISS PWY SK PTL
Sbjct: 70 EEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTL 129
Query: 81 QHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDCLERPRKVLA 140
+HQR QP+++K +S EWYKRGV S K+RKGACENCGAMTHKKKDC ERPR+V A
Sbjct: 130 KHQRPQPEKQKQYSSSGEWYKRGVKENSITTKYRKGACENCGAMTHKKKDCFERPRRVGA 189
Query: 141 KYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKRELRADKLD- 199
K++ IA DE VQP+L+ DYD KRDRW GY+P H IVE Y K++ AKR L+A KL
Sbjct: 190 KFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYAKVDLAKRTLKAQKLQE 249
Query: 200 ---AGVSIDNRGS-----------XXXXXXXXXXXXXXXXXXXXXXMPGTKVDSKQRITV 245
+G ++ S MPG DSK+RITV
Sbjct: 250 ELASGKLVEQANSPKHQWGEEEPNSQMEKDHNSEDEDEDKYADDIDMPGQNFDSKRRITV 309
Query: 246 RNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVA-NPEDVDYAGENFVRFSGDTR 304
RNLRIRED AKYLRNLDPNSAYYDPKTR+MR+NPY NP++V YAG+NFVR++GDT
Sbjct: 310 RNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGKNPDEVSYAGDNFVRYTGDTI 369
Query: 305 KHATAQLFAWEAYEKGVDVHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVIDKYGGAEHX 364
A QLFAWEAY+KG +VH+ A+PT S+++KYGG EH
Sbjct: 370 SMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKEQQKESILEKYGGQEHL 429
Query: 365 XXXXXXXXXXXTEDYVEYSRYGKVIK 390
TEDYVEYSR+G VIK
Sbjct: 430 DAPPAELLLAQTEDYVEYSRHGTVIK 455
Score = 67 (28.6 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 490 LLRMDERKRSYNSMISVKEPT 510
++++DERKR YNS+ +EPT
Sbjct: 589 IMQIDERKRPYNSIYETREPT 609
>UNIPROTKB|F1RR54 [details] [associations]
symbol:SLU7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IEA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 SMART:SM00343 GO:GO:0005737
GO:GO:0006886 GO:GO:0033554 GO:GO:0016607 GO:GO:0008270
GO:GO:0071013 GO:GO:0030532 GO:GO:0000380 GO:GO:0000389 KO:K12819
OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708
GeneTree:ENSGT00390000002292 GO:GO:0030628 GO:GO:0000386
EMBL:CU571129 EMBL:CU928350 RefSeq:XP_003134141.1 UniGene:Ssc.83723
Ensembl:ENSSSCT00000018545 GeneID:100517791 KEGG:ssc:100517791
Uniprot:F1RR54
Length = 586
Score = 1053 (375.7 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 210/386 (54%), Positives = 248/386 (64%)
Query: 22 DEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYISSAPWYFG-SKGPTL 80
+EPKK +REDWRK KELEE RK G APA VDE G+DINPHIPQYISS PWY SK PTL
Sbjct: 23 EEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTL 82
Query: 81 QHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDCLERPRKVLA 140
+HQR QP+++K +S EWYKRGV S K+RKGACENCGAMTHKKKDC ERPR+V A
Sbjct: 83 KHQRPQPEKQKQYSSSGEWYKRGVKENSITTKYRKGACENCGAMTHKKKDCFERPRRVGA 142
Query: 141 KYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKRELRADKLD- 199
K++ IA DE +QP+L+ DYD KRDRW GY+P H IVE Y K++ AKR L+A KL
Sbjct: 143 KFTGTNIAPDEHIQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYAKVDLAKRTLKAQKLQE 202
Query: 200 ---AGVSIDNRGS-----------XXXXXXXXXXXXXXXXXXXXXXMPGTKVDSKQRITV 245
+G ++ S MPG DSK+RITV
Sbjct: 203 ELASGKLVEQANSPKHQWGEEEPNSQTEKDHNSEDEDEDKYADDIDMPGQNFDSKRRITV 262
Query: 246 RNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVA-NPEDVDYAGENFVRFSGDTR 304
RNLRIRED AKYLRNLDPNSAYYDPKTR+MR+NPY NP++V YAG+NFVR++GDT
Sbjct: 263 RNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGKNPDEVSYAGDNFVRYTGDTI 322
Query: 305 KHATAQLFAWEAYEKGVDVHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVIDKYGGAEHX 364
A QLFAWEAY+KG +VH+ A+PT S+++KYGG EH
Sbjct: 323 SMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKEQQKESILEKYGGQEHL 382
Query: 365 XXXXXXXXXXXTEDYVEYSRYGKVIK 390
TEDYVEYSR+G VIK
Sbjct: 383 DAPPAELLLAQTEDYVEYSRHGTVIK 408
Score = 67 (28.6 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 490 LLRMDERKRSYNSMISVKEPT 510
++++DERKR YNS+ +EPT
Sbjct: 542 IMQIDERKRPYNSVYETREPT 562
>MGI|MGI:2385598 [details] [associations]
symbol:Slu7 "SLU7 splicing factor homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISO] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=ISO]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=ISO] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISO] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=ISO] [GO:0033554
"cellular response to stress" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
MGI:MGI:2385598 GO:GO:0005737 GO:GO:0006886 GO:GO:0033554
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0005681
GO:GO:0071013 GO:GO:0030532 EMBL:AL670472 GO:GO:0000380
GO:GO:0000389 eggNOG:NOG251791 KO:K12819 OMA:PQTLMEM
InterPro:IPR021715 Pfam:PF11708 CTD:10569
GeneTree:ENSGT00390000002292 HOVERGEN:HBG053287 OrthoDB:EOG42RD76
GO:GO:0030628 GO:GO:0000386 ChiTaRS:SLU7 EMBL:AK029117
EMBL:AK046262 EMBL:AK047597 EMBL:AK049178 EMBL:BC013810
EMBL:BC023057 EMBL:BC060954 EMBL:BC082780 EMBL:BC106099
IPI:IPI00221882 RefSeq:NP_683514.2 RefSeq:NP_945174.1
UniGene:Mm.28200 ProteinModelPortal:Q8BHJ9 STRING:Q8BHJ9
PhosphoSite:Q8BHJ9 PaxDb:Q8BHJ9 PRIDE:Q8BHJ9 DNASU:193116
Ensembl:ENSMUST00000020681 Ensembl:ENSMUST00000151880
Ensembl:ENSMUST00000178622 GeneID:193116 KEGG:mmu:193116
UCSC:uc007imp.1 InParanoid:Q8BHJ9 NextBio:371430 Bgee:Q8BHJ9
CleanEx:MM_SLU7 Genevestigator:Q8BHJ9 Uniprot:Q8BHJ9
Length = 585
Score = 1053 (375.7 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 215/401 (53%), Positives = 254/401 (63%)
Query: 9 PVSEILRTKASED--DEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYI 66
PVS T + E +EPKK +REDWRK KELEE RK G APA VDE G+DINPHIPQYI
Sbjct: 8 PVSATPMTGSKEMSLEEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYI 67
Query: 67 SSAPWYFG-SKGPTLQHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMT 125
SS PWY SK PTL+HQR QP+++K +S EWYKRGV S K+RKGACENCGAMT
Sbjct: 68 SSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSITTKYRKGACENCGAMT 127
Query: 126 HKKKDCLERPRKVLAKYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQK 185
HK+KDC ERPR+V AK++ IA DE VQP+L+ DYD KRDRW GY+P H IVE Y K
Sbjct: 128 HKRKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYAK 187
Query: 186 IEEAKRELRADKLD----AGVSIDNRGS-----------XXXXXXXXXXXXXXXXXXXXX 230
++ AKR L+A KL +G ++ S
Sbjct: 188 VDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQMEKDHNSEDEDEDKYADDI 247
Query: 231 XMPGTKVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVA-NPEDV 289
MPG DSK+RITVRNLRIRED AKYLRNLDPNSAYYDPKTR+MR+NPY NP++V
Sbjct: 248 DMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGKNPDEV 307
Query: 290 DYAGENFVRFSGDTRKHATAQLFAWEAYEKGVDVHVLAEPTXXXXXXXXXXXXXXXXXXX 349
YAG+NFVR++GDT A QLFAWEAY+KG +VH+ A+PT
Sbjct: 308 SYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKEQ 367
Query: 350 VSSSVIDKYGGAEHXXXXXXXXXXXXTEDYVEYSRYGKVIK 390
S+++KYGG EH TEDYVEYSR+G VIK
Sbjct: 368 QKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIK 408
Score = 67 (28.6 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 490 LLRMDERKRSYNSMISVKEPT 510
++++DERKR YNS+ +EPT
Sbjct: 541 IMQIDERKRPYNSIYETREPT 561
>RGD|631432 [details] [associations]
symbol:Slu7 "SLU7 splicing factor homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=ISS] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=ISS] [GO:0030532
"small nuclear ribonucleoprotein complex" evidence=ISS] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=ISS] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] InterPro:IPR001878
PROSITE:PS50158 SMART:SM00343 RGD:631432 GO:GO:0005737
GO:GO:0006886 GO:GO:0033554 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0005681 GO:GO:0071013 GO:GO:0030532
GO:GO:0000380 GO:GO:0000389 UniGene:Rn.137183 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 OMA:PQTLMEM InterPro:IPR021715
Pfam:PF11708 CTD:10569 GeneTree:ENSGT00390000002292
HOVERGEN:HBG053287 OrthoDB:EOG42RD76 GO:GO:0030628 GO:GO:0000386
EMBL:AY207315 EMBL:AABR03074285 EMBL:AABR03076495 EMBL:BC062243
IPI:IPI00197160 RefSeq:NP_001094020.1 STRING:Q80ZG5
PhosphoSite:Q80ZG5 PRIDE:Q80ZG5 Ensembl:ENSRNOT00000005132
GeneID:303057 KEGG:rno:303057 UCSC:RGD:631432 InParanoid:Q80ZG5
NextBio:650615 ArrayExpress:Q80ZG5 Genevestigator:Q80ZG5
Uniprot:Q80ZG5
Length = 586
Score = 1052 (375.4 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 214/401 (53%), Positives = 254/401 (63%)
Query: 9 PVSEILRTKASED--DEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYI 66
PVS T + E +EPKK +REDWRK KELEE RK G APA VDE G+DINPHIPQYI
Sbjct: 8 PVSATPMTGSKEMNLEEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYI 67
Query: 67 SSAPWYFG-SKGPTLQHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMT 125
SS PWY SK PTL+HQR QP+++K +S EWYKRGV S K+RKGACENCGAMT
Sbjct: 68 SSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSITTKYRKGACENCGAMT 127
Query: 126 HKKKDCLERPRKVLAKYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQK 185
HK+KDC ERPR+V AK++ IA DE +QP+L+ DYD KRDRW GY+P H IVE Y K
Sbjct: 128 HKRKDCFERPRRVGAKFTGTNIAPDEHIQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYAK 187
Query: 186 IEEAKRELRADKLD----AGVSIDNRGS-----------XXXXXXXXXXXXXXXXXXXXX 230
++ AKR L+A KL +G ++ S
Sbjct: 188 VDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQMEKDHNSEDEDEDKYADDI 247
Query: 231 XMPGTKVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVA-NPEDV 289
MPG DSK+RITVRNLRIRED AKYLRNLDPNSAYYDPKTR+MR+NPY NP++V
Sbjct: 248 DMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANAGKNPDEV 307
Query: 290 DYAGENFVRFSGDTRKHATAQLFAWEAYEKGVDVHVLAEPTXXXXXXXXXXXXXXXXXXX 349
YAG+NFVR++GDT A QLFAWEAY+KG +VH+ A+PT
Sbjct: 308 SYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVKKEDFKEQ 367
Query: 350 VSSSVIDKYGGAEHXXXXXXXXXXXXTEDYVEYSRYGKVIK 390
S+++KYGG EH TEDYVEYSR+G VIK
Sbjct: 368 QKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIK 408
Score = 67 (28.6 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 490 LLRMDERKRSYNSMISVKEPT 510
++++DERKR YNS+ +EPT
Sbjct: 542 IMQVDERKRPYNSIYETREPT 562
>WB|WBGene00010629 [details] [associations]
symbol:K07C5.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0008380 GO:GO:0046872 GO:GO:0018996 GO:GO:0008270
GO:GO:0006397 GO:GO:0040011 GO:GO:0005681 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 EMBL:Z71181
eggNOG:NOG251791 HOGENOM:HOG000194391 KO:K12819 InterPro:IPR021715
Pfam:PF11708 GeneTree:ENSGT00390000002292 PIR:T23407
RefSeq:NP_505661.1 ProteinModelPortal:Q21278 STRING:Q21278
PaxDb:Q21278 EnsemblMetazoa:K07C5.6.1 EnsemblMetazoa:K07C5.6.2
GeneID:179443 KEGG:cel:CELE_K07C5.6 UCSC:K07C5.6.1 CTD:179443
WormBase:K07C5.6 InParanoid:Q21278 OMA:TESYIEY NextBio:905420
Uniprot:Q21278
Length = 647
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 182/395 (46%), Positives = 236/395 (59%)
Query: 1 MASTSTNVPVSEILRTKASEDDEPKKKSREDWRKAKELEEARKAGTAPAAVD-EHGRDIN 59
MAS N+P S +++ + + D KKS+ + ++ ++LEE RKAGTAPA VD + GRDIN
Sbjct: 1 MASYKQNLPPSALIKQQVNVAD---KKSKAEVQRDRQLEEDRKAGTAPAMVDVQTGRDIN 57
Query: 60 PHIPQYISSAPWYFGSKGPTLQHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACE 119
PHIP +IS PWY S+GPTL+HQR ++EK + EWY++G T A KFRKGACE
Sbjct: 58 PHIPMFISQNPWYVPSEGPTLKHQRPHEEREKKMTQIHEWYQKGT-TGKSATKFRKGACE 116
Query: 120 NCGAMTHKKKDCLERPRKVLAKYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAI 179
NCGAM H+K+DC +RPRK AK +N IA D++VQP L +D+KRDRW GYDPS HK +
Sbjct: 117 NCGAMGHQKRDCFDRPRKSNAKETNDNIAEDDYVQPNLTLGFDAKRDRWNGYDPSTHKQV 176
Query: 180 VEHYQKIEEAKRELRADKLDAGVSIDNRGSXXXXXXXXXXXXXXXXXXXXXXMPGTKVD- 238
+E Y+ +EEA++ +R ++ G M G VD
Sbjct: 177 IEDYEHLEEARKVVREHEM-------KEGEVEPATTEDGAPKDEDMYAEDADMAGVSVDM 229
Query: 239 -SKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVANPE--DVDYAGEN 295
S+ RITVRNLRIREDTAKYL NL NS YYDPK+RSMR+NP+ VA E ++G+N
Sbjct: 230 DSRTRITVRNLRIREDTAKYLYNLAENSPYYDPKSRSMRENPFAGVAGKELEAARFSGDN 289
Query: 296 FVRFSGDTRKHATAQLFAWEAYEKGVDVHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVI 355
FVR+SG+ AQ+FAW+A GV H +AEPT ++
Sbjct: 290 FVRYSGEVTAANEAQVFAWQATRGGVYAHSIAEPTKLEALKKEYEKEKSTLKNETQKELL 349
Query: 356 DKYGGAEHXXXXXXXXXXXXTEDYVEYSRYGKVIK 390
DKYGG EH TE Y+EY+R GKVIK
Sbjct: 350 DKYGGGEHMERPADELLLAQTESYIEYNRKGKVIK 384
>DICTYBASE|DDB_G0281901 [details] [associations]
symbol:slu7 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA;ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
dictyBase:DDB_G0281901 GenomeReviews:CM000152_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006397 GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000043 GO:GO:0000375 eggNOG:NOG251791 KO:K12819
OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708 RefSeq:XP_640489.1
STRING:Q54TA0 EnsemblProtists:DDB0233423 GeneID:8623303
KEGG:ddi:DDB_G0281901 ProtClustDB:CLSZ2846778 Uniprot:Q54TA0
Length = 558
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 167/370 (45%), Positives = 220/370 (59%)
Query: 26 KKSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYISSAPWYFGSKGPTLQHQRI 85
+K+R++++K KEL+EARKAG APA +DE G++INPHIP+YI APWY + P+L+HQR
Sbjct: 8 RKTRDEYKKEKELDEARKAGNAPAELDEEGKEINPHIPEYILKAPWYLNANKPSLKHQRG 67
Query: 86 QPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDCLERPRKVLAKYSNA 145
+E + WY RG T A KFRKGACENCGAMTHK KDC ERPRK+ AK++N
Sbjct: 68 VTKKEMDKG----WYLRGATTGEAATKFRKGACENCGAMTHKTKDCCERPRKLGAKFTND 123
Query: 146 QIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKRELRADKL--DAGVS 203
I DE +Q KL DYDSKRD + GYDPS++K +++ Y+K + +++ + +L G
Sbjct: 124 DIKPDEVIQ-KLELDYDSKRDPYNGYDPSSYKEVMDIYEKADTERKKKKLQELIKQHGGG 182
Query: 204 IDNRG---SXXXXXXXXXXXXXXXXXXXXXXMPGTKVDSKQRITVRNLRIREDTAKYLRN 260
D + P K+D K R T+RNLRIREDTAKYL N
Sbjct: 183 GDKKTPDVDETLSKELMDNEEKEGSYDSETVAPIQKLDQKSRTTIRNLRIREDTAKYLYN 242
Query: 261 LDPNSAYYDPKTRSMRDNPYETVANPEDVDYAGENFVRFSGDTRKHATAQLFAWEAYEKG 320
LD NSA+Y+PK+RSMRDNP ANP D+ +AG+NF R SG+T++ Q FAWEA EKG
Sbjct: 243 LDVNSAFYEPKSRSMRDNPLPN-ANPNDIKFAGDNFARTSGETKEFRDLQRFAWEAQEKG 301
Query: 321 VDVHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVIDKYGGAEHXXXXXXXXXXXXTEDYV 380
DV + + P+ + ++ KYGG EH +E Y
Sbjct: 302 QDVDISSAPSQAALLHADFLRKKEQLKQQTRNQLLTKYGGEEHLLKQEEIDKVPQSEIYT 361
Query: 381 EYSRYGKVIK 390
EYS GK+IK
Sbjct: 362 EYSSSGKLIK 371
>TAIR|locus:2018496 [details] [associations]
symbol:SMP1 "SWELLMAP 1" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA;IMP] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0030422 "production of siRNA involved
in RNA interference" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048522 "positive regulation of cellular process"
evidence=RCA] [GO:0051276 "chromosome organization" evidence=RCA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0008380 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0003727 GO:GO:0006397 GO:GO:0005681
EMBL:AC001229 EMBL:AC007234 EMBL:BT002797 IPI:IPI00532994
PIR:E96681 RefSeq:NP_564859.2 UniGene:At.35860 PaxDb:Q9SHY8
PRIDE:Q9SHY8 EnsemblPlants:AT1G65660.1 GeneID:842877
KEGG:ath:AT1G65660 TAIR:At1g65660 eggNOG:NOG251791
HOGENOM:HOG000194391 InParanoid:Q9SHY8 KO:K12819 OMA:PQTLMEM
PhylomeDB:Q9SHY8 ProtClustDB:CLSN2684786 Genevestigator:Q9SHY8
InterPro:IPR021715 Pfam:PF11708 Uniprot:Q9SHY8
Length = 535
Score = 730 (262.0 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 163/377 (43%), Positives = 215/377 (57%)
Query: 27 KSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYISSAPWYFGSKGPTLQHQRIQ 86
KSRED RK ELEEARKAG APA VDE G++INPHIPQY+SSAPWY S+ P+L+HQR
Sbjct: 9 KSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKPSLKHQRKW 68
Query: 87 PDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDCLERPRKVLAKYSNAQ 146
+ P + WY RG QA+K+RKGAC+NCGAMTH K C++RPRK+ AKY+N
Sbjct: 69 --KSDPNYT-KSWYDRGAKIF-QAEKYRKGACQNCGAMTHTAKACMDRPRKIGAKYTNMN 124
Query: 147 IACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKRE-LRADKLDAGVSID 205
IA DE ++ + DYD KRDRW GYDPS + +++ Y+ E+A+++ L+ +L +
Sbjct: 125 IAPDEKIESFEL-DYDGKRDRWNGYDPSTYHRVIDLYEAKEDARKKYLKEQQLKKLEEKN 183
Query: 206 N--RGSXXXXXXXXXXXXXXXXXXX---XXXMPGTKVDSKQRIT-------VRNLRIRED 253
N +G M KV+ + R T VRNLRIRED
Sbjct: 184 NNEKGDDANSDGEEDEDDLRVDEAKVDESRQMDFAKVEKRVRTTGGGSTGTVRNLRIRED 243
Query: 254 TAKYLRNLDPNSAYYDPKTRSMRDNPYETVANPEDVDYAGENFVRFSGDTRKHATAQLFA 313
TAKYL NLD NSA+YDPKTRSMR++P A+P D Y G+N R SG + + +
Sbjct: 244 TAKYLLNLDVNSAHYDPKTRSMREDPLPD-ADPNDKFYLGDNQYRNSGQALEFKQLNIHS 302
Query: 314 WEAYEKGVDVHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVIDKYGGAEHXXXXXXXXXX 373
WEA++KG D+H+ A P+ +++DKYG A
Sbjct: 303 WEAFDKGQDMHMQAAPSQAELLYKSFQVAKEKLKSQTKDTIMDKYGNAATEDEIPMELLL 362
Query: 374 XXTEDYVEYSRYGKVIK 390
+E VEY R G++IK
Sbjct: 363 GQSERQVEYDRAGRIIK 379
Score = 40 (19.1 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 484 QREADRLLRMDERKRSYN 501
+ + R DERKR YN
Sbjct: 488 KEDLSRREEKDERKRKYN 505
>TAIR|locus:2115115 [details] [associations]
symbol:SMP2 "SWELLMAP 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;RCA] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0051276 "chromosome organization"
evidence=RCA] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008380 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0003727 GO:GO:0006397
GO:GO:0005681 EMBL:Z99707 EMBL:AL161590 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 ProtClustDB:CLSN2684786
InterPro:IPR021715 Pfam:PF11708 EMBL:AY056418 IPI:IPI00533640
PIR:E85438 RefSeq:NP_568017.1 UniGene:At.4652 PaxDb:O23174
PRIDE:O23174 EnsemblPlants:AT4G37120.1 GeneID:829866
KEGG:ath:AT4G37120 TAIR:At4g37120 InParanoid:O23174 OMA:DSAKYDP
PhylomeDB:O23174 Genevestigator:O23174 Uniprot:O23174
Length = 536
Score = 696 (250.1 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 158/385 (41%), Positives = 214/385 (55%)
Query: 27 KSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYISSAPWYFGSKGPTLQHQRIQ 86
KSRED RK ELEEARKAG APA VDE G++INPHIP+Y+S APWY S+ P+L+HQ+
Sbjct: 9 KSREDHRKKLELEEARKAGLAPAEVDEDGKEINPHIPEYMSKAPWYLKSEQPSLKHQKNW 68
Query: 87 PDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDCLERPRKVLAKYSNAQ 146
+ +P+ WY RG QA+++RKGAC NCGAMTH K C++RPRK+ AKY+N
Sbjct: 69 KIEPEPKKI---WYDRG-KKIYQAEQYRKGACINCGAMTHSSKACMDRPRKIGAKYTNMN 124
Query: 147 IACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKR----ELRADKLDAGV 202
IA DE ++ + DYD KRDRW GYD S ++ +V+ Y EEA++ E + KL+
Sbjct: 125 IAADEKIESFEL-DYDGKRDRWNGYDTSTYRHVVDRYDAKEEARKKYLKEQQLKKLEEKN 183
Query: 203 SIDNRGSXXXXXXXXXXXXXXXXXXXXXX--MPGTKVDSKQRIT-------VRNLRIRED 253
+ +N M KV+ + R T VRNLRIRED
Sbjct: 184 NNENGDDATSDGEEDLDDLRVDEAKVDESRQMDFAKVEKRVRTTGGGSTGTVRNLRIRED 243
Query: 254 TAKYLRNLDPNSAYYDPKTRSMRDNPYETVANPEDVDYAGENFVRFSGDTRKHATAQLFA 313
TAKYL NLD NSA+YDPKTRSMR++P A+P + Y G+N R SG + + +
Sbjct: 244 TAKYLLNLDVNSAHYDPKTRSMREDPLPD-ADPNEKFYLGDNQYRNSGQALEFKQINIHS 302
Query: 314 WEAYEKGVDVHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVIDKYGGAEHXXXXXXXXXX 373
EA++KG D+H+ A P+ ++++KYG A
Sbjct: 303 CEAFDKGHDMHMQAAPSQAELLYKNFKVAKEKLKTQTKDTIMEKYGNAATEGEIPMELLL 362
Query: 374 XXTEDYVEYSRYGKVIKMYIPTIIP 398
+E +EY R G+++K IIP
Sbjct: 363 GQSERQIEYDRAGRIMKGQ-EVIIP 386
Score = 40 (19.1 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 484 QREADRLLRMDERKRSYN 501
+ + R DERKR YN
Sbjct: 488 KEDLSRREEKDERKRKYN 505
>TAIR|locus:2077157 [details] [associations]
symbol:AT3G45950 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 SMART:SM00343 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0008270 GO:GO:0003676 EMBL:AL162459
HOGENOM:HOG000194391 KO:K12819 ProtClustDB:CLSN2684786
InterPro:IPR021715 Pfam:PF11708 IPI:IPI00542568 PIR:T47535
RefSeq:NP_190181.1 UniGene:At.65253 PaxDb:Q9LZT6 PRIDE:Q9LZT6
EnsemblPlants:AT3G45950.1 GeneID:823738 KEGG:ath:AT3G45950
TAIR:At3g45950 eggNOG:NOG305850 InParanoid:Q9LZT6 OMA:DDIPMEL
PhylomeDB:Q9LZT6 Genevestigator:Q9LZT6 Uniprot:Q9LZT6
Length = 385
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 144/339 (42%), Positives = 193/339 (56%)
Query: 27 KSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYISSAPWYFGSKGPTLQHQRIQ 86
KSR+D RK KELEEARKAG APA VDE G++IN HIP+Y++ P Y S+ P+L+HQ+
Sbjct: 9 KSRKDHRKQKELEEARKAGLAPAEVDEGGKEINLHIPKYLTIPPLYAKSEKPSLKHQKNW 68
Query: 87 PDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDCLERPRKVLAKYSNAQ 146
+ KP S +Y RG T QA+K+RKGAC+NCGAMTH K C+ERPRKV AKY++
Sbjct: 69 --KTKP-VSTTSYYDRGAKTY-QAEKYRKGACQNCGAMTHDVKTCMERPRKVGAKYTDKN 124
Query: 147 IACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKRE-LRADKLDAGV--- 202
IA DE ++ L DYD KRDRW GYDPS++ + + ++ E A+ + L +L A +
Sbjct: 125 IAPDEKIE-SLEFDYDGKRDRWNGYDPSSYCHVRDRHEAKENAREKYLNEQQLIAKLEEK 183
Query: 203 SIDNRGSXXXXXXXXXXXXXXXXXXXXXXMPGTKVDSKQRITVRNLRIREDTAKYLRNLD 262
+ID T D + TVRNLRIRED AKYL NLD
Sbjct: 184 NIDGEEEDLRVDEAKIDESMQVDFAKVKKRVRT-TDGGSKGTVRNLRIREDPAKYLLNLD 242
Query: 263 PNSAYYDPKTRSMRDNPYETVANPEDVDYAGENFVRFSGDTRKHATAQLFAWEAYEKGVD 322
NSAYYDPK+RSMR++P +P + +N R SG + +++ EA++KG D
Sbjct: 243 VNSAYYDPKSRSMREDPLP-YTDPNEKFCLRDNQYRNSGQAIEFKQQNMYSCEAFDKGQD 301
Query: 323 VHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVIDKYGGA 361
+H+ A P+ ++I KYG A
Sbjct: 302 IHMQAAPSQAELCYKRVKIAKEKLNSQRKDAIIAKYGDA 340
>GENEDB_PFALCIPARUM|PFF0500c [details] [associations]
symbol:PFF0500c "step II splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR001878 SMART:SM00343 GO:GO:0008380
GO:GO:0008270 GO:GO:0005681 GO:GO:0003676 EMBL:AL844505
HOGENOM:HOG000194391 KO:K12819 OMA:PQTLMEM InterPro:IPR021715
Pfam:PF11708 RefSeq:XP_966091.1 ProteinModelPortal:C6KSU8
PRIDE:C6KSU8 EnsemblProtists:PFF0500c:mRNA GeneID:3885881
KEGG:pfa:PFF0500c EuPathDB:PlasmoDB:PF3D7_0610100
ProtClustDB:CLSZ2432798 Uniprot:C6KSU8
Length = 444
Score = 325 (119.5 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 70/174 (40%), Positives = 99/174 (56%)
Query: 25 KKKSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYISSAPWYFGSKGPTLQHQR 84
K +RE+ +K EL EARKAG A DE G DINPH+PQYI APWY P L+HQR
Sbjct: 4 KNATREEKKKELELNEARKAGKVEALKDEEGNDINPHMPQYIIKAPWYLNQTKPGLKHQR 63
Query: 85 IQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDCLERPRKVLAKYSN 144
+ +K + +E K+ ++ + F C+NCG++ HK+KDCLER RK +
Sbjct: 64 YK-GSDKIKIE-EERNKKLFLNNNKGQDF----CKNCGSVAHKEKDCLERTRKKKVNFMK 117
Query: 145 AQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKRELRADKL 198
++F+ YD RDRW GY+ +N I + Y+KI E K++ +A+ L
Sbjct: 118 NDN--EDFICVTQDLGYDGNRDRWVGYNVNNFDYIYKEYEKIVEEKKKRKAEDL 169
Score = 240 (89.5 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 47/96 (48%), Positives = 65/96 (67%)
Query: 238 DSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVA---NPEDVDYAGE 294
+ K R RNLRIREDTAKYL NL NSA+YDPK+RSMR++P+ + N +D Y GE
Sbjct: 235 NEKNRNIARNLRIREDTAKYLYNLSLNSAFYDPKSRSMREDPFANIRKHLNDDDNYYKGE 294
Query: 295 NFVRFSGDTRKHATAQLFAWEAYEKGVDVHVLAEPT 330
N+ + D + ++FAWE+Y++G +VH A+PT
Sbjct: 295 NYYNNTDDAIESKKLEVFAWESYKRGENVHFNAQPT 330
Score = 47 (21.6 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 22 DEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDIN 59
+E KK+ ED +K E + +K T D + D N
Sbjct: 159 EEKKKRKAEDLKKQYEKKSVKKKKTHDNNDDNNNGDNN 196
>UNIPROTKB|C6KSU8 [details] [associations]
symbol:PFF0500c "Step II splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001878 SMART:SM00343 GO:GO:0008380 GO:GO:0008270
GO:GO:0005681 GO:GO:0003676 EMBL:AL844505 HOGENOM:HOG000194391
KO:K12819 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708
RefSeq:XP_966091.1 ProteinModelPortal:C6KSU8 PRIDE:C6KSU8
EnsemblProtists:PFF0500c:mRNA GeneID:3885881 KEGG:pfa:PFF0500c
EuPathDB:PlasmoDB:PF3D7_0610100 ProtClustDB:CLSZ2432798
Uniprot:C6KSU8
Length = 444
Score = 325 (119.5 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 70/174 (40%), Positives = 99/174 (56%)
Query: 25 KKKSREDWRKAKELEEARKAGTAPAAVDEHGRDINPHIPQYISSAPWYFGSKGPTLQHQR 84
K +RE+ +K EL EARKAG A DE G DINPH+PQYI APWY P L+HQR
Sbjct: 4 KNATREEKKKELELNEARKAGKVEALKDEEGNDINPHMPQYIIKAPWYLNQTKPGLKHQR 63
Query: 85 IQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDCLERPRKVLAKYSN 144
+ +K + +E K+ ++ + F C+NCG++ HK+KDCLER RK +
Sbjct: 64 YK-GSDKIKIE-EERNKKLFLNNNKGQDF----CKNCGSVAHKEKDCLERTRKKKVNFMK 117
Query: 145 AQIACDEFVQPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKRELRADKL 198
++F+ YD RDRW GY+ +N I + Y+KI E K++ +A+ L
Sbjct: 118 NDN--EDFICVTQDLGYDGNRDRWVGYNVNNFDYIYKEYEKIVEEKKKRKAEDL 169
Score = 240 (89.5 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 47/96 (48%), Positives = 65/96 (67%)
Query: 238 DSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVA---NPEDVDYAGE 294
+ K R RNLRIREDTAKYL NL NSA+YDPK+RSMR++P+ + N +D Y GE
Sbjct: 235 NEKNRNIARNLRIREDTAKYLYNLSLNSAFYDPKSRSMREDPFANIRKHLNDDDNYYKGE 294
Query: 295 NFVRFSGDTRKHATAQLFAWEAYEKGVDVHVLAEPT 330
N+ + D + ++FAWE+Y++G +VH A+PT
Sbjct: 295 NYYNNTDDAIESKKLEVFAWESYKRGENVHFNAQPT 330
Score = 47 (21.6 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 22 DEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDIN 59
+E KK+ ED +K E + +K T D + D N
Sbjct: 159 EEKKKRKAEDLKKQYEKKSVKKKKTHDNNDDNNNGDNN 196
>UNIPROTKB|Q51LA6 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008380
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:CM000230 EMBL:CM001237 eggNOG:NOG251791
KO:K12819 InterPro:IPR021715 Pfam:PF11708 OrthoDB:EOG49GPRB
RefSeq:XP_003720714.1 STRING:Q51LA6 EnsemblFungi:MGG_02985T0
GeneID:2682538 KEGG:mgr:MGG_02985 Uniprot:Q51LA6
Length = 474
Score = 329 (120.9 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 70/155 (45%), Positives = 97/155 (62%)
Query: 56 RDINPHIPQYISSAPWYFGSKGPT---LQHQRIQPDQEKPRASLDEWYKRGVDTTSQAKK 112
++ N +IP +IS P+Y +G L+HQRIQ +EK WY RG A K
Sbjct: 20 KEENVYIPNFISKRPFYAVDEGENTDYLEHQRIQK-KEKDTG----WYDRGKTLGPAATK 74
Query: 113 FRKGACENCGAMTHKKKDCLERPRKVLAKYSNAQIACDEFVQPKLIQDYDSKRDRWAGYD 172
+RKGACENCGAMTHK KDCL RPR AK++ I DE VQ + +D+KRDRW GYD
Sbjct: 75 YRKGACENCGAMTHKVKDCLSRPRAKGAKWTGRDIKADELVQD-VRMGWDAKRDRWNGYD 133
Query: 173 PSNHKAIVEHYQKIEEAKRELRADKL-DAGVSIDN 206
++A+VE Y K+EE ++E++A ++G +I++
Sbjct: 134 AREYQAVVEDYNKMEELRKEMQAKAAAESGKAIED 168
Score = 221 (82.9 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 58/153 (37%), Positives = 74/153 (48%)
Query: 241 QRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVANPEDVD-YAGENFVRF 299
Q + R LR+REDTAKYL NLD +SA YDPKTR++ D N + + YA + F+R
Sbjct: 182 QPTSTRQLRLREDTAKYLLNLDLDSAKYDPKTRTIVD---AGATNDKTAELYAEQGFLRQ 238
Query: 300 SGDTRKHATAQLFAWEAYEKGVD--VHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVIDK 357
SGD + AQ +AWEA EKG D +H+ A PT + +K
Sbjct: 239 SGDAAEFEKAQRYAWEAQEKGGDTSLHLQANPTAGSYMRKKLKEEEDAKREERERQLREK 298
Query: 358 YGGAEHXXXXXXXXXXXXTED--YVEYSRYGKV 388
YGG E TE YVEY G +
Sbjct: 299 YGGEETKVLPDAIRQMAVTESERYVEYDEIGLI 331
>ASPGD|ASPL0000074217 [details] [associations]
symbol:AN4788 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008380
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:BN001303 EMBL:AACD01000081 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 InterPro:IPR021715 Pfam:PF11708
OMA:DSAKYDP EMBL:DQ157008 RefSeq:XP_662392.1 STRING:Q5B3U2
EnsemblFungi:CADANIAT00005634 GeneID:2872587 KEGG:ani:AN4788.2
OrthoDB:EOG49GPRB Uniprot:Q5B3U2
Length = 466
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 121/342 (35%), Positives = 166/342 (48%)
Query: 52 DEHGRDINPHIPQYISSAPWYFGSKGPT---LQHQRIQPDQEKPRASLDEWYKRGVDTTS 108
D ++ N +IP +IS P+Y L+HQR+ K +WY+RG
Sbjct: 7 DVASKERNEYIPAFISKKPFYIDDDDTANDYLEHQRLH----KQTTDQSKWYERGKRAGP 62
Query: 109 QAKKFRKGACENCGAMTHKKKDCLERPRKVLAKYSNAQIACDEFVQPKLIQDYDSKRDRW 168
A K+RKGACENCGAMTHK K+CL RPRK AK++ I DE +Q + +D+KRDRW
Sbjct: 63 AATKYRKGACENCGAMTHKAKECLSRPRKHGAKWTGKDIQADEVIQ-NVDLGWDAKRDRW 121
Query: 169 AGYDPSNHKAIVEHYQKIEEAKRELRADKLDAGVSIDNRGSXXXXXXXXXXXXXXXXXXX 228
GYD + ++ +VE Y+++E KR+ + K + + D
Sbjct: 122 NGYDAAEYRQVVEEYEELERLKRQAKLTKGETQTTNDGLDDEAPEQEARYAEE------- 174
Query: 229 XXXMPGTKVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVANPED 288
+ + +Q RNLRIREDTAKYL NLD +SA YDPKTR M D +
Sbjct: 175 ------SDMGRQQSTATRNLRIREDTAKYLLNLDLDSAKYDPKTRRMVD--MGAAEDQAA 226
Query: 289 VDYAGENFVRFSGDTRKHATAQLFAWEAYEKGVD-VHVLAEPTXXXXXXXXXXXXXXXXX 347
A ENFVR SGD + AQ +AWEA E+G +H+ A PT
Sbjct: 227 ALVAEENFVRSSGDAAEFERAQRYAWEAQERGTQKIHLQANPTSGEITRKKELAESEAKR 286
Query: 348 XXVSSSVIDKYGGAEHXXXX-XXXXXXXXTEDYVEYSRYGKV 388
++++KYGG +H E +VEY G +
Sbjct: 287 DAHRKALLEKYGGEQHLKHTPLLETMVVENERFVEYDETGAI 328
>POMBASE|SPBC365.05c [details] [associations]
symbol:slu7 "splicing factor Slu7" species:4896
"Schizosaccharomyces pombe" [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=ISO] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
PomBase:SPBC365.05c GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676 GO:GO:0000350
eggNOG:NOG251791 HOGENOM:HOG000194391 KO:K12819 InterPro:IPR021715
Pfam:PF11708 OrthoDB:EOG49GPRB PIR:T40312 RefSeq:NP_596034.1
IntAct:Q9Y7Y2 EnsemblFungi:SPBC365.05c.1 GeneID:2540941
KEGG:spo:SPBC365.05c NextBio:20802056 Uniprot:Q9Y7Y2
Length = 379
Score = 335 (123.0 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 70/159 (44%), Positives = 102/159 (64%)
Query: 40 EARKAGTAPAAVDEHGRDINPHIPQYISSAPWYFGSKGPT--LQHQRIQPDQEKP---RA 94
+A+K + P +D D NP+IP++IS+APWY L HQRI +E P R+
Sbjct: 33 KAQKRRSRP--MDNPDAD-NPYIPKFISTAPWYAQDDDAVERLAHQRIGK-KETPSGGRS 88
Query: 95 SLD-EWYKRGVDTTSQAKKFRKGACENCGAMTHKKKDCLERPRKVLAKYSNAQIACDEFV 153
S++ WY RG A K+RKGACENCGAM+HK KDC+ERPRK A+++ I DE +
Sbjct: 89 SIEGSWYVRGKKLGPAATKYRKGACENCGAMSHKVKDCMERPRKRGARWTGEDIQADEVI 148
Query: 154 QPKLIQDYDSKRDRWAGYDPSNHKAIVEHYQKIEEAKRE 192
Q + +D+KRDRW GYD +++K ++E Y+K++E + +
Sbjct: 149 QDINVS-WDAKRDRWNGYDATDYKKVIERYEKLDELQNK 186
Score = 183 (69.5 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 44/118 (37%), Positives = 59/118 (50%)
Query: 243 ITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVANPEDVDYAGENFVRFSGD 302
IT +LR+RED YLR D + Y+PK+RSMRD ET + D G FV+ SG
Sbjct: 216 ITTPSLRMREDVVAYLR-ADNKNLQYEPKSRSMRD---ETGYHMVDDSSGGAGFVKASGG 271
Query: 303 TRKH-ATAQLFAWEAYEKGVDVHVLAEPTXXXXXXXXXXXXXXXXXXXVSSSVIDKYG 359
++ Q+FAWEA G VHV+A PT + S++D+YG
Sbjct: 272 EKEDFEKLQMFAWEAERSGTRVHVVANPTAGELEFRKNKASRMTTQKHIDQSILDRYG 329
>UNIPROTKB|E5RK41 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
SMART:SM00343 GO:GO:0008270 GO:GO:0003676 EMBL:AC091842
HGNC:HGNC:16939 ChiTaRS:SLU7 IPI:IPI00979899
Ensembl:ENST00000521826 ArrayExpress:E5RK41 Bgee:E5RK41
Uniprot:E5RK41
Length = 143
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 90/143 (62%), Positives = 106/143 (74%)
Query: 1 MASTSTN-VPVSEILRTKASEDDEPKKKSREDWRKAKELEEARKAGTAPAAVDEHGRDIN 59
M++T + V + + +K +EPKK +REDWRK KELEE RK G APA VDE G+DIN
Sbjct: 1 MSATVVDAVNAAPLSGSKEMSLEEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDIN 60
Query: 60 PHIPQYISSAPWYFG-SKGPTLQHQRIQPDQEKPRASLDEWYKRGVDTTSQAKKFRKGAC 118
PHIPQYISS PWY SK PTL+HQR QP+++K +S EWYKRGV S K+RKGAC
Sbjct: 61 PHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSIITKYRKGAC 120
Query: 119 ENCGAMTHKKKDCLERPRKVLAK 141
ENCGAMTHKKKDC ERPR+V AK
Sbjct: 121 ENCGAMTHKKKDCFERPRRVGAK 143
>SGD|S000002495 [details] [associations]
symbol:SLU7 "RNA splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0000350 "generation of
catalytic spliceosome for second transesterification step"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IEA;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000386 "second
spliceosomal transesterification activity" evidence=IDA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 SGD:S000002495
GO:GO:0046872 GO:GO:0008270 EMBL:BK006938 GO:GO:0005681
GO:GO:0003676 EMBL:Z46796 EMBL:X82086 Gene3D:4.10.60.10
GO:GO:0000350 KO:K12819 InterPro:IPR021715 Pfam:PF11708
GeneTree:ENSGT00390000002292 OrthoDB:EOG49GPRB EMBL:X67810
EMBL:Z74384 EMBL:Z74385 EMBL:AY557701 PIR:A46229 RefSeq:NP_010373.3
RefSeq:NP_010377.3 ProteinModelPortal:Q02775 DIP:DIP-220N
IntAct:Q02775 MINT:MINT-394061 STRING:Q02775 PaxDb:Q02775
EnsemblFungi:YDR088C GeneID:851661 GeneID:851666 KEGG:sce:YDR088C
KEGG:sce:YDR092W CYGD:YDR088c eggNOG:NOG278054 HOGENOM:HOG000154339
KO:K10580 OMA:GYSGKEY NextBio:969269 Genevestigator:Q02775
GermOnline:YDR088C Uniprot:Q02775
Length = 382
Score = 158 (60.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 55/221 (24%), Positives = 89/221 (40%)
Query: 118 CENCGAMTHKKKDCLERPRKV--LAKYSNAQIACDEFVQPKLIQDYDSKRDRWAGYDPSN 175
C NCG HK+KDC+E+PRK+ L N+Q + D+DS++DRW GY
Sbjct: 122 CRNCGEAGHKEKDCMEKPRKMQKLVPDLNSQKNNGTVLVRATDDDWDSRKDRWYGYSGKE 181
Query: 176 HKAIVEHYQKIEEAKRELRADKLDAGVSIDNRGSXXXXXXXXXXXXXXXXXXXXXXMPGT 235
+ ++ +++ + K + + DK ++ + +
Sbjct: 182 YNELISKWERDKRNKIKGK-DKSQTDETLWDTDEEIELMKLELYKDSVGS------LKKD 234
Query: 236 KVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPYETVANPEDV---DYA 292
D+ Q + R+RED A YL +++ + YDPK+R + V +
Sbjct: 235 DADNSQLYRT-STRLREDKAAYLNDINSTESNYDPKSRLYKTETLGAVDEKSKMFRRHLT 293
Query: 293 GENFV--RFSGDTRKHATAQLFAWEAYEKGVDVHVL-AEPT 330
GE + R HA E +K HVL A PT
Sbjct: 294 GEGLKLNELNQFARSHAKEMGIRDEIEDKEKVQHVLVANPT 334
Score = 61 (26.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 59 NPHIPQYISSAPWYF 73
N HIP+YI + PWY+
Sbjct: 30 NIHIPRYIRNQPWYY 44
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.130 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 520 433 0.00087 118 3 11 23 0.47 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 617 (66 KB)
Total size of DFA: 289 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.33u 0.13s 40.46t Elapsed: 00:00:22
Total cpu time: 40.33u 0.13s 40.46t Elapsed: 00:00:22
Start: Thu Aug 15 14:55:43 2013 End: Thu Aug 15 14:56:05 2013