Your job contains 1 sequence.
>psy422
PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDD
SPGIKVKSPAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTTTAARSNRTGAGSGG
MWRYYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRSSS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy422
(164 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0010638 - symbol:Sec61beta "Sec61beta" species:722... 364 2.0e-33 1
UNIPROTKB|Q2NKT5 - symbol:SEC61B "Sec61 beta subunit" spe... 315 3.1e-28 1
ZFIN|ZDB-GENE-040718-260 - symbol:sec61b "Sec61 beta subu... 313 5.0e-28 1
RGD|1304997 - symbol:Sec61b "Sec61 beta subunit" species:... 312 6.4e-28 1
UNIPROTKB|F1NWX7 - symbol:SEC61B "Uncharacterized protein... 311 8.2e-28 1
UNIPROTKB|P60467 - symbol:SEC61B "Protein transport prote... 311 8.2e-28 1
UNIPROTKB|P60468 - symbol:SEC61B "Protein transport prote... 311 8.2e-28 1
UNIPROTKB|F2Z5P0 - symbol:SEC61B "Uncharacterized protein... 311 8.2e-28 1
UNIPROTKB|Q5RB31 - symbol:SEC61B "Protein transport prote... 311 8.2e-28 1
MGI|MGI:1913462 - symbol:Sec61b "Sec61 beta subunit" spec... 308 1.7e-27 1
WB|WBGene00021427 - symbol:Y38F2AR.9 species:6239 "Caenor... 252 1.5e-21 1
TAIR|locus:2175108 - symbol:AT5G60460 "AT5G60460" species... 166 1.9e-12 1
TAIR|locus:2055567 - symbol:SEC61 BETA "AT2G45070" specie... 160 8.2e-12 1
UNIPROTKB|G4N713 - symbol:MGG_03644 "Uncharacterized prot... 155 2.8e-11 1
TAIR|locus:2103376 - symbol:AT3G60540 "AT3G60540" species... 154 3.5e-11 1
DICTYBASE|DDB_G0278117 - symbol:sec61b "protein transport... 151 7.4e-11 1
POMBASE|SPBC2G2.03c - symbol:sbh1 "translocon beta subuni... 132 7.6e-09 1
UNIPROTKB|J9NRV7 - symbol:FGA "Fibrinogen alpha chain" sp... 129 3.1e-07 1
UNIPROTKB|F1PBL4 - symbol:FGA "Fibrinogen alpha chain" sp... 129 3.4e-07 1
GENEDB_PFALCIPARUM|MAL8P1.51 - symbol:MAL8P1.51 "protein-... 113 7.8e-07 1
UNIPROTKB|C0H4W6 - symbol:MAL8P1.51 "Sec61 beta subunit, ... 113 7.8e-07 1
UNIPROTKB|Q8WML4 - symbol:MUC1 "Mucin-1" species:9913 "Bo... 118 1.2e-05 1
SGD|S000002127 - symbol:SBH2 "Ssh1p-Sss1p-Sbh2p complex c... 97 3.9e-05 1
UNIPROTKB|J9NSZ4 - symbol:J9NSZ4 "Uncharacterized protein... 114 5.8e-05 1
SGD|S000002128 - symbol:SBH1 "Beta subunit of the Sec61p ... 92 0.00015 1
TAIR|locus:2061211 - symbol:AT2G40070 "AT2G40070" species... 108 0.00062 1
UNIPROTKB|Q1CXR4 - symbol:difE "Histidine kinase DifE" sp... 109 0.00071 1
>FB|FBgn0010638 [details] [associations]
symbol:Sec61beta "Sec61beta" species:7227 "Drosophila
melanogaster" [GO:0006616 "SRP-dependent cotranslational protein
targeting to membrane, translocation" evidence=ISS] [GO:0005784
"Sec61 translocon complex" evidence=ISS;NAS] [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0010507 "negative regulation of
autophagy" evidence=IMP] Pfam:PF03911 PANTHER:PTHR13509
EMBL:AE013599 GO:GO:0010507 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 GeneTree:ENSGT00390000003561
OMA:GSGGMWR eggNOG:NOG282971 EMBL:AY071155 EMBL:BT050441
EMBL:AJ249754 RefSeq:NP_652037.1 UniGene:Dm.3305 SMR:Q7JZN0
IntAct:Q7JZN0 STRING:Q7JZN0 EnsemblMetazoa:FBtr0087498 GeneID:46080
KEGG:dme:Dmel_CG10130 UCSC:CG10130-RA CTD:46080 FlyBase:FBgn0010638
InParanoid:Q7JZN0 OrthoDB:EOG473N7Z GenomeRNAi:46080 NextBio:838730
Uniprot:Q7JZN0
Length = 100
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 77/99 (77%), Positives = 82/99 (82%)
Query: 69 PAPASSTSVGSGTRSP-KAGGP--GGRPTGSTVRQRKPTT-TTAARSNRTG-AGSGGMWR 123
PAPASSTSVGSG+RSP K P G GST++QRK TT TTAARS G AG+GGMWR
Sbjct: 2 PAPASSTSVGSGSRSPSKLSAPRSAGSGGGSTLKQRKTTTSTTAARSRAPGGAGTGGMWR 61
Query: 124 YYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 162
+YTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKY RS
Sbjct: 62 FYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 52/76 (68%), Positives = 57/76 (75%)
Query: 1 PAPASSTSVGSGTRSP-KAGGP--GGRPTGSTVRQRKPTT-TTAARSNRTG-AGSGGMWR 55
PAPASSTSVGSG+RSP K P G GST++QRK TT TTAARS G AG+GGMWR
Sbjct: 2 PAPASSTSVGSGSRSPSKLSAPRSAGSGGGSTLKQRKTTTSTTAARSRAPGGAGTGGMWR 61
Query: 56 YYTDDSPGIKVKSPAP 71
+YTDDSPGIKV P P
Sbjct: 62 FYTDDSPGIKV-GPVP 76
>UNIPROTKB|Q2NKT5 [details] [associations]
symbol:SEC61B "Sec61 beta subunit" species:9913 "Bos
taurus" [GO:0031205 "endoplasmic reticulum Sec complex"
evidence=IDA] [GO:0048408 "epidermal growth factor binding"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0000060 GO:GO:0030433 GO:GO:0030970 GO:GO:0031205
HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952
GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281 OMA:GSGGMWR
OrthoDB:EOG4STS6D eggNOG:NOG282971 EMBL:DAAA02023273 EMBL:BC111652
IPI:IPI00714767 RefSeq:NP_001068760.1 UniGene:Bt.4410 STRING:Q2NKT5
Ensembl:ENSBTAT00000003190 GeneID:506986 KEGG:bta:506986
InParanoid:Q2NKT5 NextBio:20867841 Uniprot:Q2NKT5
Length = 96
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 65/95 (68%), Positives = 72/95 (75%)
Query: 69 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 127
PAP S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PAP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 128 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 162
DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 39/72 (54%), Positives = 46/72 (63%)
Query: 1 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 59
PAP S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PAP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 60 DSPGIKVKSPAP 71
DSPG+KV P P
Sbjct: 62 DSPGLKV-GPVP 72
>ZFIN|ZDB-GENE-040718-260 [details] [associations]
symbol:sec61b "Sec61 beta subunit" species:7955
"Danio rerio" [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF03911 ZFIN:ZDB-GENE-040718-260 PANTHER:PTHR13509
HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952 eggNOG:NOG248540
GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281 OMA:GSGGMWR
OrthoDB:EOG4STS6D EMBL:CU914485 EMBL:BC076372 IPI:IPI00503730
RefSeq:NP_001002527.1 UniGene:Dr.75889 STRING:Q6DGH3
Ensembl:ENSDART00000059013 GeneID:791986 KEGG:dre:791986
NextBio:20930874 Uniprot:Q6DGH3
Length = 97
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 64/98 (65%), Positives = 78/98 (79%)
Query: 69 PAPASS-TSVGSGTRSP-KAGGPGGRPTGSTVRQRKPTTTTAARSNRT--GAGSGGMWRY 124
P PA+S T+VG+ +RSP K P R G++ RQRK T+++A R+ AG+GGMWR+
Sbjct: 2 PGPAASATNVGASSRSPSKTVAP--RTAGTSARQRKATSSSARSGGRSTASAGTGGMWRF 59
Query: 125 YTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 162
YT+DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 60 YTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 97
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 38/75 (50%), Positives = 52/75 (69%)
Query: 1 PAPASS-TSVGSGTRSP-KAGGPGGRPTGSTVRQRKPTTTTAARSNRT--GAGSGGMWRY 56
P PA+S T+VG+ +RSP K P R G++ RQRK T+++A R+ AG+GGMWR+
Sbjct: 2 PGPAASATNVGASSRSPSKTVAP--RTAGTSARQRKATSSSARSGGRSTASAGTGGMWRF 59
Query: 57 YTDDSPGIKVKSPAP 71
YT+DSPG+KV P P
Sbjct: 60 YTEDSPGLKV-GPVP 73
>RGD|1304997 [details] [associations]
symbol:Sec61b "Sec61 beta subunit" species:10116 "Rattus
norvegicus" [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0030433
"ER-associated protein catabolic process" evidence=IEA;ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA;ISO] [GO:0043022 "ribosome binding" evidence=ISO]
[GO:0048408 "epidermal growth factor binding" evidence=IEA;ISO]
RGD:1304997 Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0000060
GO:GO:0030433 GO:GO:0030970 HOGENOM:HOG000211109 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952
eggNOG:NOG248540 GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281
OrthoDB:EOG4STS6D EMBL:BC167110 EMBL:CH474056 IPI:IPI00364983
RefSeq:NP_001100124.1 UniGene:Rn.103030 MINT:MINT-7138994
STRING:B2RZD1 Ensembl:ENSRNOT00000008329 GeneID:298068
KEGG:rno:298068 UCSC:RGD:1304997 NextBio:643084
Genevestigator:B2RZD1 Uniprot:B2RZD1
Length = 96
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 64/95 (67%), Positives = 72/95 (75%)
Query: 69 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 127
P P S+T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SATNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 128 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 162
DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 38/72 (52%), Positives = 46/72 (63%)
Query: 1 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 59
P P S+T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SATNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 60 DSPGIKVKSPAP 71
DSPG+KV P P
Sbjct: 62 DSPGLKV-GPVP 72
>UNIPROTKB|F1NWX7 [details] [associations]
symbol:SEC61B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA] [GO:0048408 "epidermal
growth factor binding" evidence=IEA] Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0000060 GO:GO:0030433 GO:GO:0030970 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 GeneTree:ENSGT00390000003561
OMA:GSGGMWR EMBL:AADN02008307 IPI:IPI00603738
Ensembl:ENSGALT00000022088 Uniprot:F1NWX7
Length = 96
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 65/96 (67%), Positives = 75/96 (78%)
Query: 69 PAPASSTSVGSGTRSP-KAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYT 126
P+P S+T+VG+ RSP KA P R GSTVRQRK + T + T G+GGMWR+YT
Sbjct: 4 PSP-SATNVGTSGRSPSKAVAP--RAAGSTVRQRKNASCGTRSAGRATSTGTGGMWRFYT 60
Query: 127 DDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 162
+DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 61 EDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 39/73 (53%), Positives = 49/73 (67%)
Query: 1 PAPASSTSVGSGTRSP-KAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYT 58
P+P S+T+VG+ RSP KA P R GSTVRQRK + T + T G+GGMWR+YT
Sbjct: 4 PSP-SATNVGTSGRSPSKAVAP--RAAGSTVRQRKNASCGTRSAGRATSTGTGGMWRFYT 60
Query: 59 DDSPGIKVKSPAP 71
+DSPG+KV P P
Sbjct: 61 EDSPGLKV-GPVP 72
>UNIPROTKB|P60467 [details] [associations]
symbol:SEC61B "Protein transport protein Sec61 subunit
beta" species:9615 "Canis lupus familiaris" [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=TAS] [GO:0005783 "endoplasmic reticulum"
evidence=TAS] [GO:0031205 "endoplasmic reticulum Sec complex"
evidence=ISS] [GO:0048408 "epidermal growth factor binding"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Reactome:REACT_93968 Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0016021 GO:GO:0000060 Reactome:REACT_103209 GO:GO:0030433
GO:GO:0030970 GO:GO:0031205 GO:GO:0015450 PDB:2WWB PDBsum:2WWB
HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 EMBL:L25052 PIR:S42409
RefSeq:NP_001003326.1 UniGene:Cfa.3895 ProteinModelPortal:P60467
SMR:P60467 STRING:P60467 PRIDE:P60467 Ensembl:ENSCAFT00000003996
GeneID:404018 KEGG:cfa:404018 CTD:10952 eggNOG:NOG248540
GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281 InParanoid:P60467
OMA:GSGGMWR OrthoDB:EOG4STS6D EvolutionaryTrace:P60467
NextBio:20817505 Uniprot:P60467
Length = 96
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 64/95 (67%), Positives = 71/95 (74%)
Query: 69 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 127
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 128 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 162
DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 38/72 (52%), Positives = 45/72 (62%)
Query: 1 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 59
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 60 DSPGIKVKSPAP 71
DSPG+KV P P
Sbjct: 62 DSPGLKV-GPVP 72
>UNIPROTKB|P60468 [details] [associations]
symbol:SEC61B "Protein transport protein Sec61 subunit
beta" species:9606 "Homo sapiens" [GO:0048408 "epidermal growth
factor binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0030433 "ER-associated protein catabolic process"
evidence=IDA] [GO:0031205 "endoplasmic reticulum Sec complex"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=NAS]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IMP] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IMP] [GO:0002474 "antigen processing and
presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0006412 "translation" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0042590 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_17015
Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0016021 Reactome:REACT_6900
GO:GO:0002479 GO:GO:0006412 GO:GO:0000060 GO:GO:0030433
EMBL:AL137067 TCDB:3.A.5.9.1 GO:GO:0030970 GO:GO:0031205
GO:GO:0006614 HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952 eggNOG:NOG248540
HOVERGEN:HBG061281 OMA:GSGGMWR OrthoDB:EOG4STS6D EMBL:L25085
EMBL:CR456883 EMBL:BC001734 IPI:IPI00220835 PIR:S42410
RefSeq:NP_006799.1 UniGene:Hs.191887 ProteinModelPortal:P60468
SMR:P60468 DIP:DIP-40997N IntAct:P60468 MINT:MINT-106933
STRING:P60468 PhosphoSite:P60468 DMDM:42560366 PaxDb:P60468
PeptideAtlas:P60468 PRIDE:P60468 Ensembl:ENST00000223641
GeneID:10952 KEGG:hsa:10952 UCSC:uc004azh.3 GeneCards:GC09P101984
HGNC:HGNC:16993 HPA:HPA049407 MIM:609214 neXtProt:NX_P60468
PharmGKB:PA134888963 InParanoid:P60468 PhylomeDB:P60468
GenomeRNAi:10952 NextBio:41613 Bgee:P60468 CleanEx:HS_SEC61B
Genevestigator:P60468 GermOnline:ENSG00000106803 Uniprot:P60468
Length = 96
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 64/95 (67%), Positives = 71/95 (74%)
Query: 69 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 127
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 128 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 162
DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 38/72 (52%), Positives = 45/72 (62%)
Query: 1 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 59
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 60 DSPGIKVKSPAP 71
DSPG+KV P P
Sbjct: 62 DSPGLKV-GPVP 72
>UNIPROTKB|F2Z5P0 [details] [associations]
symbol:SEC61B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048408 "epidermal growth factor binding" evidence=IEA]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0000060 GO:GO:0030433 GO:GO:0030970 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952
GeneTree:ENSGT00390000003561 OMA:GSGGMWR EMBL:CU861555
RefSeq:NP_001230754.1 UniGene:Ssc.3932 ProteinModelPortal:F2Z5P0
SMR:F2Z5P0 PRIDE:F2Z5P0 Ensembl:ENSSSCT00000005924 GeneID:100511362
KEGG:ssc:100511362 Uniprot:F2Z5P0
Length = 96
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 64/95 (67%), Positives = 71/95 (74%)
Query: 69 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 127
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 128 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 162
DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 38/72 (52%), Positives = 45/72 (62%)
Query: 1 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 59
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 60 DSPGIKVKSPAP 71
DSPG+KV P P
Sbjct: 62 DSPGLKV-GPVP 72
>UNIPROTKB|Q5RB31 [details] [associations]
symbol:SEC61B "Protein transport protein Sec61 subunit
beta" species:9601 "Pongo abelii" [GO:0031205 "endoplasmic
reticulum Sec complex" evidence=ISS] Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0016021 GO:GO:0000060 GO:GO:0030433 GO:GO:0030970
GO:GO:0031205 KO:K09481 InterPro:IPR005609 InterPro:IPR016482
PIRSF:PIRSF006398 CTD:10952 GeneTree:ENSGT00390000003561
HOVERGEN:HBG061281 OMA:GSGGMWR EMBL:CR858826 RefSeq:NP_001129010.1
UniGene:Pab.19781 ProteinModelPortal:Q5RB31 SMR:Q5RB31 PRIDE:Q5RB31
Ensembl:ENSPPYT00000022675 GeneID:100190850 KEGG:pon:100190850
InParanoid:Q5RB31 Uniprot:Q5RB31
Length = 96
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 64/95 (67%), Positives = 71/95 (74%)
Query: 69 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 127
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 128 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 162
DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 38/72 (52%), Positives = 45/72 (62%)
Query: 1 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 59
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 60 DSPGIKVKSPAP 71
DSPG+KV P P
Sbjct: 62 DSPGLKV-GPVP 72
>MGI|MGI:1913462 [details] [associations]
symbol:Sec61b "Sec61 beta subunit" species:10090 "Mus
musculus" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=ISO] [GO:0030970
"retrograde protein transport, ER to cytosol" evidence=ISO]
[GO:0043022 "ribosome binding" evidence=IDA] [GO:0048408 "epidermal
growth factor binding" evidence=ISO] MGI:MGI:1913462 Pfam:PF03911
PANTHER:PTHR13509 GO:GO:0016021 GO:GO:0005789 GO:GO:0015031
GO:GO:0043022 HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952
GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281 OrthoDB:EOG4STS6D
eggNOG:NOG282971 EMBL:AK004505 EMBL:AK008739 EMBL:BC002089
EMBL:BC081445 IPI:IPI00133030 RefSeq:NP_077133.1 UniGene:Mm.20188
ProteinModelPortal:Q9CQS8 SMR:Q9CQS8 IntAct:Q9CQS8 STRING:Q9CQS8
PhosphoSite:Q9CQS8 PaxDb:Q9CQS8 PRIDE:Q9CQS8
Ensembl:ENSMUST00000065678 GeneID:66212 KEGG:mmu:66212
InParanoid:Q9CQS8 ChiTaRS:SEC61B NextBio:320979 Bgee:Q9CQS8
CleanEx:MM_SEC61B Genevestigator:Q9CQS8
GermOnline:ENSMUSG00000053317 Uniprot:Q9CQS8
Length = 96
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 63/95 (66%), Positives = 71/95 (74%)
Query: 69 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 127
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 128 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 162
DSPG+KVGPVPVLVMSLLFIA+VFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIAAVFMLHIWGKYTRS 96
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 38/72 (52%), Positives = 45/72 (62%)
Query: 1 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 59
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 60 DSPGIKVKSPAP 71
DSPG+KV P P
Sbjct: 62 DSPGLKV-GPVP 72
>WB|WBGene00021427 [details] [associations]
symbol:Y38F2AR.9 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF03911
PANTHER:PTHR13509 HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 GeneTree:ENSGT00390000003561
eggNOG:NOG282971 EMBL:FO080872 RefSeq:NP_500197.1
ProteinModelPortal:Q95XS2 SMR:Q95XS2 STRING:Q95XS2 PaxDb:Q95XS2
EnsemblMetazoa:Y38F2AR.9.1 EnsemblMetazoa:Y38F2AR.9.2 GeneID:177027
KEGG:cel:CELE_Y38F2AR.9 UCSC:Y38F2AR.9.1 CTD:177027
WormBase:Y38F2AR.9 InParanoid:Q95XS2 OMA:QRKGGAT NextBio:895028
Uniprot:Q95XS2
Length = 81
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 47/75 (62%), Positives = 56/75 (74%)
Query: 88 GPGGRPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVGPVPVLVMSLLFI 147
G RPT VRQRK A R G +GG+WR+YT+DS G+K+GPVPVLVMSL+FI
Sbjct: 5 GRSPRPTTGGVRQRKGGAAAAPARARAGGNNGGLWRFYTEDSTGLKIGPVPVLVMSLVFI 64
Query: 148 ASVFMLHIWGKYTRS 162
ASVF+LHIWGK+TRS
Sbjct: 65 ASVFVLHIWGKFTRS 79
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 20 GPGGRPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVKSPAP 71
G RPT VRQRK A R G +GG+WR+YT+DS G+K+ P P
Sbjct: 5 GRSPRPTTGGVRQRKGGAAAAPARARAGGNNGGLWRFYTEDSTGLKI-GPVP 55
>TAIR|locus:2175108 [details] [associations]
symbol:AT5G60460 "AT5G60460" species:3702 "Arabidopsis
thaliana" [GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015031 "protein
transport" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0005886 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB011483
HOGENOM:HOG000211109 KO:K09481 ProtClustDB:CLSN2683328
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398
eggNOG:NOG282971 OMA:QRKGGAT EMBL:BT005455 EMBL:AK118120
IPI:IPI00536413 RefSeq:NP_200854.1 UniGene:At.43597
ProteinModelPortal:Q9FKK1 SMR:Q9FKK1 IntAct:Q9FKK1 STRING:Q9FKK1
PaxDb:Q9FKK1 PRIDE:Q9FKK1 EnsemblPlants:AT5G60460.1 GeneID:836167
KEGG:ath:AT5G60460 TAIR:At5g60460 InParanoid:Q9FKK1
PhylomeDB:Q9FKK1 ArrayExpress:Q9FKK1 Genevestigator:Q9FKK1
Uniprot:Q9FKK1
Length = 109
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 38/95 (40%), Positives = 53/95 (55%)
Query: 74 STSVGSGTRSPKAGGPGGRPTGST-VRQRK---PTTTTAARSNRTGAGSGGMWRYYTDDS 129
STS GS T P P G + +R+R+ ++ + G+GS M R+YTDD+
Sbjct: 11 STSTGSSTARPGLAAPRGSAAATAGMRRRRLGGGGGVSSGGGSGVGSGSSNMLRFYTDDA 70
Query: 130 PGIKVGPVPVLVMSLLFIASVFMLHIWGK-YTRSS 163
PG+K+ P VL+MSL FI V LH++GK Y S
Sbjct: 71 PGLKISPTVVLIMSLCFIGFVTALHVFGKLYLHKS 105
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 6 STSVGSGTRSPKAGGPGGRPTGST-VRQRK---PTTTTAARSNRTGAGSGGMWRYYTDDS 61
STS GS T P P G + +R+R+ ++ + G+GS M R+YTDD+
Sbjct: 11 STSTGSSTARPGLAAPRGSAAATAGMRRRRLGGGGGVSSGGGSGVGSGSSNMLRFYTDDA 70
Query: 62 PGIKVKSP 69
PG+K+ SP
Sbjct: 71 PGLKI-SP 77
>TAIR|locus:2055567 [details] [associations]
symbol:SEC61 BETA "AT2G45070" species:3702 "Arabidopsis
thaliana" [GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0015031 "protein transport" evidence=ISS] [GO:0006457 "protein
folding" evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0015031
EMBL:Z26753 EMBL:BT000904 IPI:IPI00525929 PIR:T52378
RefSeq:NP_001031539.1 RefSeq:NP_001031540.1 RefSeq:NP_001078061.1
RefSeq:NP_182033.1 UniGene:At.25586 ProteinModelPortal:P38389
SMR:P38389 IntAct:P38389 STRING:P38389 PaxDb:P38389 PRIDE:P38389
EnsemblPlants:AT2G45070.1 EnsemblPlants:AT2G45070.2
EnsemblPlants:AT2G45070.3 EnsemblPlants:AT2G45070.4 GeneID:819114
KEGG:ath:AT2G45070 TAIR:At2g45070 eggNOG:NOG320639
HOGENOM:HOG000211109 InParanoid:P38389 KO:K09481 OMA:AAGSMLQ
PhylomeDB:P38389 ProtClustDB:CLSN2683328 Genevestigator:P38389
GermOnline:AT2G45070 InterPro:IPR005609 InterPro:IPR016482
PIRSF:PIRSF006398 Uniprot:P38389
Length = 82
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 77 VGSGTRSPKAGGPGGRPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVGP 136
VGSG +P+ G T S +R+RKPT+ A +G +G M ++YTDD+PG+K+ P
Sbjct: 2 VGSG--APQRGSAAA--TAS-MRRRKPTSG-AGGGGASGGAAGSMLQFYTDDAPGLKISP 55
Query: 137 VPVLVMSLLFIASVFMLHIWGK 158
VL+MS+ FIA V +LH+ GK
Sbjct: 56 NVVLIMSIGFIAFVAVLHVMGK 77
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 9 VGSGTRSPKAGGPGGRPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVKS 68
VGSG +P+ G T S +R+RKPT+ A +G +G M ++YTDD+PG+K+ S
Sbjct: 2 VGSG--APQRGSAAA--TAS-MRRRKPTSG-AGGGGASGGAAGSMLQFYTDDAPGLKI-S 54
Query: 69 PAPASSTSVG 78
P S+G
Sbjct: 55 PNVVLIMSIG 64
>UNIPROTKB|G4N713 [details] [associations]
symbol:MGG_03644 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF03911 PANTHER:PTHR13509 EMBL:CM001234 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 RefSeq:XP_003716245.1
EnsemblFungi:MGG_03644T0 GeneID:2676629 KEGG:mgr:MGG_03644
Uniprot:G4N713
Length = 144
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 41/98 (41%), Positives = 53/98 (54%)
Query: 65 KVKSPAPASSTSVGSGTRSPKAGGP-GGRPTGSTVR---QRKPTTTTAARSNRTGAGSGG 120
+ SPA A + + G+ P + P GG T R +K A S+ AG+GG
Sbjct: 5 RASSPANAPAAATGASVNRPSSPTPPGGARTAIRRRAAADQKEKIANARPSSTRAAGAGG 64
Query: 121 ----MWRYYTDDSPGIKVGPVPVLVMSLLFIASVFMLH 154
M R YTD+SPG+KV PV VLV+SL+FI SV LH
Sbjct: 65 SSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALH 102
>TAIR|locus:2103376 [details] [associations]
symbol:AT3G60540 "AT3G60540" species:3702 "Arabidopsis
thaliana" [GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0015031 "protein transport" evidence=ISS] [GO:0009627 "systemic
acquired resistance" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] Pfam:PF03911
PANTHER:PTHR13509 EMBL:CP002686 EMBL:AL138646 KO:K09481
ProtClustDB:CLSN2683328 InterPro:IPR005609 InterPro:IPR016482
PIRSF:PIRSF006398 IPI:IPI00530812 PIR:T47865 RefSeq:NP_191613.1
RefSeq:NP_974467.1 UniGene:At.34426 ProteinModelPortal:Q9M206
SMR:Q9M206 STRING:Q9M206 EnsemblPlants:AT3G60540.1
EnsemblPlants:AT3G60540.2 GeneID:825225 KEGG:ath:AT3G60540
TAIR:At3g60540 InParanoid:Q9M206 OMA:NAVLIMS PhylomeDB:Q9M206
Genevestigator:Q9M206 Uniprot:Q9M206
Length = 81
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 77 VGSGTRSPKAGGPGGRPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVGP 136
VG G +P+ G T S +R+RKP A S+ G G+G M ++YTDD+PG+K+ P
Sbjct: 2 VGGG--APQRGSAAA--TAS-MRRRKP----AGGSSSAGGGAGTMLQFYTDDAPGLKISP 52
Query: 137 VPVLVMSLLFIASVFMLHIWGK 158
VL+MS+ FIA V +LH+ GK
Sbjct: 53 NVVLIMSIGFIAFVAVLHVMGK 74
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 9 VGSGTRSPKAGGPGGRPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVKS 68
VG G +P+ G T S +R+RKP A S+ G G+G M ++YTDD+PG+K+ S
Sbjct: 2 VGGG--APQRGSAAA--TAS-MRRRKP----AGGSSSAGGGAGTMLQFYTDDAPGLKI-S 51
Query: 69 PAPASSTSVG 78
P S+G
Sbjct: 52 PNVVLIMSIG 61
>DICTYBASE|DDB_G0278117 [details] [associations]
symbol:sec61b "protein transport protein SEC61 beta
subunit" species:44689 "Dictyostelium discoideum" [GO:0008565
"protein transporter activity" evidence=IC] [GO:0006613
"cotranslational protein targeting to membrane" evidence=ISS]
[GO:0005784 "Sec61 translocon complex" evidence=ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278117 Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0016021 GenomeReviews:CM000152_GR GO:GO:0008565
EMBL:AAFI02000023 GO:GO:0005784 GO:GO:0006613 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 RefSeq:XP_642138.1
STRING:Q54YR4 EnsemblProtists:DDB0235194 GeneID:8621346
KEGG:ddi:DDB_G0278117 eggNOG:NOG282971 OMA:VIILHIM Uniprot:Q54YR4
Length = 61
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 101 RKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYT 160
++P+T A + G S M ++Y++D+ G+KVGP VL MSL+FIA V +LHI GKYT
Sbjct: 2 KRPSTQRAPATVNKGGNS--MMKFYSEDAIGLKVGPTAVLFMSLIFIAFVIILHIMGKYT 59
Query: 161 RS 162
RS
Sbjct: 60 RS 61
>POMBASE|SPBC2G2.03c [details] [associations]
symbol:sbh1 "translocon beta subunit Sbh1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005784 "Sec61 translocon complex"
evidence=ISO] [GO:0006616 "SRP-dependent cotranslational protein
targeting to membrane, translocation" evidence=ISO] [GO:0006620
"posttranslational protein targeting to membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=ISO] PomBase:SPBC2G2.03c
Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0016021 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005784 GO:GO:0006620 GO:GO:0006616
HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 PIR:T40142 RefSeq:NP_596432.1
STRING:O43002 PRIDE:O43002 EnsemblFungi:SPBC2G2.03c.1
GeneID:2540282 KEGG:spo:SPBC2G2.03c eggNOG:NOG330120 OMA:YTDEANG
OrthoDB:EOG4SXRPB NextBio:20801412 Uniprot:O43002
Length = 102
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 36/92 (39%), Positives = 49/92 (53%)
Query: 73 SSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTTTAARSNR--TGAGSGG-------MWR 123
SST ++ A PGG P S +R+R SN GA + G + +
Sbjct: 2 SSTKASGSVKNSAASAPGG-PK-SQIRRRAAVEKNTKESNSGPAGARAAGAPGSTPTLLK 59
Query: 124 YYTDDSPGIKVGPVPVLVMSLLFIASVFMLHI 155
YTD++ G KV PV V+V+S+ FIASVF+LHI
Sbjct: 60 LYTDEASGFKVDPVVVMVLSVGFIASVFLLHI 91
>UNIPROTKB|J9NRV7 [details] [associations]
symbol:FGA "Fibrinogen alpha chain" species:9615 "Canis
lupus familiaris" [GO:0051258 "protein polymerization"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0030168 "platelet activation" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005577 "fibrinogen complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR012290 Pfam:PF08702 INTERPRO:IPR002181
INTERPRO:IPR020837 GO:GO:0007165 GO:GO:0030168 GO:GO:0005577
GO:GO:0051258 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406
GeneTree:ENSGT00700000104355 InterPro:IPR021996 Pfam:PF12160
EMBL:AAEX03010065 Ensembl:ENSCAFT00000043702 Uniprot:J9NRV7
Length = 823
Score = 129 (50.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 48/150 (32%), Positives = 63/150 (42%)
Query: 3 PASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTT------TTAARSNRTGAGSGGMWRY 56
P SST +GT +P + GPG S+ R +T T + R TG GS G W
Sbjct: 220 PGSSTPGSAGTWNPGSTGPGSAGPWSSGSTRPGSTGPGSAGTWSTRPGSTGPGSAGTWSS 279
Query: 57 YTDDSPGIKVKSPAPASSTSVGSGTRSPKAGGPGGRPT---GSTVRQRKPTTTTAARSN- 112
+ PG S P S+ + SG+ P + GPG T GST +T S+
Sbjct: 280 GST-GPG----STGPGSTGTWSSGSTGPGSTGPGSTGTWSSGSTGPGNTGLGSTGTWSSG 334
Query: 113 -----RTGAGSGGMWRYYTDDSPGIKVGPV 137
TG GS G W + DS + G V
Sbjct: 335 STGPGNTGPGSTGTWSSGSSDSESFRPGSV 364
>UNIPROTKB|F1PBL4 [details] [associations]
symbol:FGA "Fibrinogen alpha chain" species:9615 "Canis
lupus familiaris" [GO:0051592 "response to calcium ion"
evidence=IEA] [GO:0043499 "eukaryotic cell surface binding"
evidence=IEA] [GO:0031091 "platelet alpha granule" evidence=IEA]
[GO:0009897 "external side of plasma membrane" evidence=IEA]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0051258 "protein
polymerization" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=IEA] [GO:0030168 "platelet activation"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005577 "fibrinogen complex" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR012290 Pfam:PF08702
INTERPRO:IPR002181 INTERPRO:IPR020837 GO:GO:0005938 GO:GO:0007165
GO:GO:0030168 GO:GO:0009897 GO:GO:0051592 GO:GO:0005577
GO:GO:0043499 GO:GO:0051258 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 GO:GO:0031091
GeneTree:ENSGT00700000104355 CTD:2243 KO:K03903 InterPro:IPR021996
Pfam:PF12160 OMA:YKCPSGC EMBL:AAEX03010065 RefSeq:XP_532697.2
Ensembl:ENSCAFT00000013402 GeneID:475473 KEGG:cfa:475473
NextBio:20851312 Uniprot:F1PBL4
Length = 892
Score = 129 (50.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 48/150 (32%), Positives = 63/150 (42%)
Query: 3 PASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTT------TTAARSNRTGAGSGGMWRY 56
P SST +GT +P + GPG S+ R +T T + R TG GS G W
Sbjct: 289 PGSSTPGSAGTWNPGSTGPGSAGPWSSGSTRPGSTGPGSAGTWSTRPGSTGPGSAGTWSS 348
Query: 57 YTDDSPGIKVKSPAPASSTSVGSGTRSPKAGGPGGRPT---GSTVRQRKPTTTTAARSN- 112
+ PG S P S+ + SG+ P + GPG T GST +T S+
Sbjct: 349 GST-GPG----STGPGSTGTWSSGSTGPGSTGPGSTGTWSSGSTGPGNTGLGSTGTWSSG 403
Query: 113 -----RTGAGSGGMWRYYTDDSPGIKVGPV 137
TG GS G W + DS + G V
Sbjct: 404 STGPGNTGPGSTGTWSSGSSDSESFRPGSV 433
>GENEDB_PFALCIPARUM|MAL8P1.51 [details] [associations]
symbol:MAL8P1.51 "protein-transport protein
sec61 beta 1 subunit, putative" species:5833 "Plasmodium
falciparum" [GO:0005784 "Sec61 translocon complex" evidence=ISS]
[GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0006886 "intracellular protein transport" evidence=ISS]
Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0008565 GO:GO:0005784
EMBL:AL844507 HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 RefSeq:XP_002808866.1
ProteinModelPortal:C0H4W6 EnsemblProtists:MAL8P1.51:mRNA
GeneID:2655350 KEGG:pfa:MAL8P1.51 EuPathDB:PlasmoDB:PF3D7_0821800
ProtClustDB:CLSZ2431987 Uniprot:C0H4W6
Length = 80
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 90 GGRPTGSTVRQRKPTTT-TAARSNRTGAG-SGGMWRYYTDDSPGIKVGPVPVLVMSLLFI 147
GG T + RQ + ++ R G S + ++Y DDSPG K+ P VL+ +L+F+
Sbjct: 9 GGMRTPARRRQSNASANGNNSKQRRNSNGNSNSIVKFYGDDSPGFKLTPQTVLISTLIFM 68
Query: 148 ASVFMLHIWGK 158
ASV +LHI K
Sbjct: 69 ASVVILHIISK 79
>UNIPROTKB|C0H4W6 [details] [associations]
symbol:MAL8P1.51 "Sec61 beta subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005784 "Sec61
translocon complex" evidence=ISS] [GO:0008565 "protein transporter
activity" evidence=ISS] [GO:0015031 "protein transport"
evidence=ISS] Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0008565
GO:GO:0005784 EMBL:AL844507 HOGENOM:HOG000211109 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398
RefSeq:XP_002808866.1 ProteinModelPortal:C0H4W6
EnsemblProtists:MAL8P1.51:mRNA GeneID:2655350 KEGG:pfa:MAL8P1.51
EuPathDB:PlasmoDB:PF3D7_0821800 ProtClustDB:CLSZ2431987
Uniprot:C0H4W6
Length = 80
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 90 GGRPTGSTVRQRKPTTT-TAARSNRTGAG-SGGMWRYYTDDSPGIKVGPVPVLVMSLLFI 147
GG T + RQ + ++ R G S + ++Y DDSPG K+ P VL+ +L+F+
Sbjct: 9 GGMRTPARRRQSNASANGNNSKQRRNSNGNSNSIVKFYGDDSPGFKLTPQTVLISTLIFM 68
Query: 148 ASVFMLHIWGK 158
ASV +LHI K
Sbjct: 69 ASVVILHIISK 79
>UNIPROTKB|Q8WML4 [details] [associations]
symbol:MUC1 "Mucin-1" species:9913 "Bos taurus" [GO:0016324
"apical plasma membrane" evidence=IBA] [GO:0009986 "cell surface"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] PANTHER:PTHR10006 GO:GO:0016021 GO:GO:0005634
GO:GO:0005737 GO:GO:0009986 GO:GO:0016324 InterPro:IPR000082
Pfam:PF01390 SMART:SM00200 PROSITE:PS50024 EMBL:AJ400824
EMBL:AF399757 IPI:IPI00706283 RefSeq:NP_776540.1 UniGene:Bt.9561
HSSP:Q16615 ProteinModelPortal:Q8WML4 SMR:Q8WML4 STRING:Q8WML4
MEROPS:S71.001 Ensembl:ENSBTAT00000014051 GeneID:281333
KEGG:bta:281333 CTD:4582 eggNOG:NOG77744
GeneTree:ENSGT00700000104548 HOGENOM:HOG000290201
HOVERGEN:HBG003075 InParanoid:Q8WML4 KO:K06568 OMA:PPAHGVT
OrthoDB:EOG4NGGNM NextBio:20805343 PMAP-CutDB:Q8WML4
ArrayExpress:Q8WML4 InterPro:IPR023217 Uniprot:Q8WML4
Length = 580
Score = 118 (46.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/120 (30%), Positives = 54/120 (45%)
Query: 1 PAPASSTSVG-SGTRSPKAGGPGGRPTGSTVRQRKPTTTTAARSNRTGA-GSGGMWRYYT 58
PAP+ + S G +GT SP G P PT S P+ T++ + T + G G +
Sbjct: 230 PAPSPAASPGHNGTSSP-TGSPAPSPTASPGHDSAPSLTSSPAPSPTASPGQHGASSPTS 288
Query: 59 DDSPGIKVKSPAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTTTAARSNRTGAGS 118
D+ + +S + + TS GT S P + T S+V + T A+ RT A S
Sbjct: 289 SDTSSMTTRSMSSSMVTSAHKGTSSRATMTPVSKGTPSSVPSSETAPTAASHITRTAASS 348
>SGD|S000002127 [details] [associations]
symbol:SBH2 "Ssh1p-Sss1p-Sbh2p complex component"
species:4932 "Saccharomyces cerevisiae" [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0071261 "Ssh1 translocon
complex" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005086 "ARF guanyl-nucleotide exchange factor activity"
evidence=IDA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IGI] [GO:0016020 "membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] SGD:S000002127 Pfam:PF03911
PANTHER:PTHR13509 GO:GO:0016021 EMBL:BK006939 EMBL:U18778
GO:GO:0005086 GO:GO:0006614 PDB:2WW9 PDB:2WWA PDBsum:2WW9
PDBsum:2WWA TCDB:3.A.5.8.1 HOGENOM:HOG000211109 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398
eggNOG:NOG330120 OMA:YTDEANG OrthoDB:EOG4SXRPB GO:GO:0071261
GeneTree:ENSGT00390000015774 EMBL:Z50012 EMBL:L38891 EMBL:AY693199
PIR:S68163 RefSeq:NP_010936.1 ProteinModelPortal:P52871 SMR:P52871
DIP:DIP-1708N IntAct:P52871 MINT:MINT-396359 STRING:P52871
PaxDb:P52871 EnsemblFungi:YER019C-A GeneID:856740
KEGG:sce:YER019C-A CYGD:YER019c-a EvolutionaryTrace:P52871
NextBio:982870 Genevestigator:P52871 GermOnline:YER019C-A
Uniprot:P52871
Length = 88
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 92 RPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVGPVPVLVMSLLFIASVF 151
R S ++ T T+ R G S + + YTD++ G +V + VL +S+ FI SV
Sbjct: 17 RQAQSIKEKQAKQTPTSTRQAGYGGSSSSILKLYTDEANGFRVDSLVVLFLSVGFIFSVI 76
Query: 152 MLHIWGKYT 160
LH+ K+T
Sbjct: 77 ALHLLTKFT 85
>UNIPROTKB|J9NSZ4 [details] [associations]
symbol:J9NSZ4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001007 PROSITE:PS01208 PROSITE:PS50184 SMART:SM00214
GO:GO:0005576 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 InterPro:IPR006208 Pfam:PF00007
GeneTree:ENSGT00700000104666 EMBL:AAEX03015138
Ensembl:ENSCAFT00000049850 Uniprot:J9NSZ4
Length = 505
Score = 114 (45.2 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 48/147 (32%), Positives = 59/147 (40%)
Query: 6 STSVGSGTRSPKAGGPG----GRP---TGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYT 58
+T++ +G+ AGGPG GR TGS + TT RS +G G GG T
Sbjct: 16 ATTLEAGSVGRTAGGPGFTSPGRVAGGTGSPTASARGGTTLGPRSEPSGTGVGGSPVATT 75
Query: 59 DD--SPGIKVKSPAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKP-TTTTAARSNRTG 115
+ S G P S V GT SP A GG P GS P + +T S G
Sbjct: 76 LEAGSVGRTAGGPGFTSPGRVAGGTGSPTASARGGTPGGSEGFTAAPGSESTGGHSGAPG 135
Query: 116 ---AGSGGMWRYYTDDSPGIKVGPVPV 139
AG G + G VG PV
Sbjct: 136 TTLAGRAGTTLGPRSEPSGTGVGGSPV 162
>SGD|S000002128 [details] [associations]
symbol:SBH1 "Beta subunit of the Sec61p ER translocation
complex" species:4932 "Saccharomyces cerevisiae" [GO:0031204
"posttranslational protein targeting to membrane, translocation"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0015450 "P-P-bond-hydrolysis-driven protein
transmembrane transporter activity" evidence=IDA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005784 "Sec61 translocon complex" evidence=IDA] [GO:0006616
"SRP-dependent cotranslational protein targeting to membrane,
translocation" evidence=IMP] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=IDA]
SGD:S000002128 Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0016021
EMBL:BK006939 EMBL:U18839 GO:GO:0005784 GO:GO:0005086 GO:GO:0031204
GO:GO:0006616 KO:K00549 RefSeq:NP_011015.3 GeneID:856825
KEGG:sce:YER091C TCDB:3.A.5.8.1 HOGENOM:HOG000211109 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398
OrthoDB:EOG4SXRPB EMBL:Z47789 PIR:S68162 RefSeq:NP_011011.3
ProteinModelPortal:P52870 SMR:P52870 DIP:DIP-5681N IntAct:P52870
MINT:MINT-529808 STRING:P52870 EnsemblFungi:YER087C-B GeneID:856821
KEGG:sce:YER087C-B CYGD:YER087c-b eggNOG:NOG307236
GeneTree:ENSGT00390000015774 NextBio:983103 Genevestigator:P52870
GermOnline:YER087C-B Uniprot:P52870
Length = 82
Score = 92 (37.4 bits), Expect = 0.00015, P = 0.00015
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 89 PGGRPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVGPVPVLVMSLLFIA 148
PGG+ T +Q A+ + + + + Y+D++ G++V P+ VL +++ FI
Sbjct: 7 PGGQRTLQKRKQGSSQKVAASAPKKNTNSNNSILKIYSDEATGLRVDPLVVLFLAVGFIF 66
Query: 149 SVFMLHIWGK 158
SV LH+ K
Sbjct: 67 SVVALHVISK 76
>TAIR|locus:2061211 [details] [associations]
symbol:AT2G40070 "AT2G40070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
EMBL:CP002685 EMBL:BT023732 EMBL:AK226897 IPI:IPI00525018
RefSeq:NP_181536.3 UniGene:At.43580 PRIDE:Q494P4
EnsemblPlants:AT2G40070.1 GeneID:818595 KEGG:ath:AT2G40070
TAIR:At2g40070 HOGENOM:HOG000015172 InParanoid:Q494P4 OMA:NLRTSAP
PhylomeDB:Q494P4 ProtClustDB:CLSN2687103 Genevestigator:Q494P4
Uniprot:Q494P4
Length = 607
Score = 108 (43.1 bits), Expect = 0.00062, P = 0.00062
Identities = 37/122 (30%), Positives = 52/122 (42%)
Query: 2 APASSTSVGSGTRSPKAGGPGGRP---TG--STVRQRKPTTTTAARSNRTGAGSGGMWRY 56
+P S+S G+ R +GGPG RP TG ST+ ++ + ++R S
Sbjct: 163 SPGLSSSSGASRRPSSSGGPGSRPATPTGRSSTLTANSKSSRPSTPTSRATVSSATRPSL 222
Query: 57 YTDDSPGIKVKSPAPAS-STSVGSGTRSPKAGGPG---GRPTGSTVRQRKPTTTTAARSN 112
S P P S STS+ S +P A P R GS R TTT +A +
Sbjct: 223 TNSRSTVSATTKPTPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPS 282
Query: 113 RT 114
R+
Sbjct: 283 RS 284
>UNIPROTKB|Q1CXR4 [details] [associations]
symbol:difE "Histidine kinase DifE" species:246197
"Myxococcus xanthus DK 1622" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002545 InterPro:IPR003594
InterPro:IPR004105 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 InterPro:IPR010808 Pfam:PF01584 Pfam:PF01627
Pfam:PF02518 Pfam:PF02895 Pfam:PF07194 PRINTS:PR00344
PROSITE:PS50851 PROSITE:PS50894 SMART:SM00073 SMART:SM00260
SMART:SM00387 InterPro:IPR005467 GO:GO:0005524 GO:GO:0005737
GO:GO:0006928 GO:GO:0006935 GO:GO:0023014 EMBL:CP000113
GenomeReviews:CP000113_GR GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 eggNOG:COG0643 Gene3D:1.10.287.560 SUPFAM:SSF50341
HOGENOM:HOG000255264 RefSeq:YP_634809.1 ProteinModelPortal:Q1CXR4
IntAct:Q1CXR4 STRING:Q1CXR4 GeneID:4107342 KEGG:mxa:MXAN_6692
PATRIC:22655875 OMA:ISEATDH BioCyc:MXAN246197:GIWU-6634-MONOMER
Gene3D:3.30.70.1110 Uniprot:Q1CXR4
Length = 857
Score = 109 (43.4 bits), Expect = 0.00071, P = 0.00071
Identities = 49/157 (31%), Positives = 59/157 (37%)
Query: 5 SSTSVGSGTRSPKAGGPGGRP-TGSTVRQRKPTTTTAARSNRTGAGSGGMW-RYYTDDSP 62
S T+ G+G S GG GG T PT A+ ++ G G+ G R D
Sbjct: 201 SGTAGGAGGSSGTTGGAGGGSGTAGGAGGSGPTGAGASPASTHGGGAAGSGTRSCVDGGS 260
Query: 63 GIKVKSPAP--ASSTSV---GSGTRSPKA--GGPGGRPTGSTVRQRKPTTTTAARSNRTG 115
G S +P AS T V G G SP GGPG T S T+ + TG
Sbjct: 261 GAAGGSASPGVASGTGVDGAGPGPASPNLMNGGPGTSATSSAPNGAHGTSAPLSPDGATG 320
Query: 116 AGSGGMWRYYTDDSPGIKVG---PVPVLVMSLLFIAS 149
+ D PG G P P L SL AS
Sbjct: 321 GVVVPLSTRRASDVPGTDAGSAAPTPDLANSLKAAAS 357
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.309 0.127 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 164 164 0.00088 107 3 11 23 0.48 32
30 0.45 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 484 (52 KB)
Total size of DFA: 115 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.27u 0.11s 25.38t Elapsed: 00:00:01
Total cpu time: 25.28u 0.11s 25.39t Elapsed: 00:00:01
Start: Thu Aug 15 15:02:13 2013 End: Thu Aug 15 15:02:14 2013