BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4226
(183 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 147 bits (370), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 105/177 (59%), Gaps = 12/177 (6%)
Query: 1 MSAVFTYKWKGEELARLLDNGTRIIAKITIASHCNRPYTNINRSQSPSLVTATDLIPISI 60
++AV TY+ G++L+ LD G + I R +++NR+ L + I + I
Sbjct: 190 IAAVITYQNIGQDLSLTLDKGYNVTISIIEGRRGVRTISSLNRTSV--LFVSISFIVLMI 247
Query: 61 GDLPRAVSLTLFQTELIFYQQYSSDNIFEIMELRRLCSAAKKALSKIPTKHIKGEDKEIS 120
L V L + + Y Q + R LCS KKA+ KIPTK K D E
Sbjct: 248 ISL---VWLIFYYIQRFRYMQAKDQ------QSRNLCSVTKKAIMKIPTKTGKFSD-EKD 297
Query: 121 GDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGFV 177
D +CCAICIE YKP+D +RILPCKHE+HKNCIDPWL+EHRTCPMCK+D+LK YG+V
Sbjct: 298 LDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLKFYGYV 354
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 106/176 (60%), Gaps = 17/176 (9%)
Query: 3 AVFTYKWKGEELARLLDNGTRIIAKITIASHCNRPYTNINRSQSPSLVTATDLIPISIGD 62
A+ + KG+E+ LL+ + ITI + + Y V+ T ++ +SI
Sbjct: 168 AIMIPEPKGKEIVSLLERNITVTMYITIGTRNLQKY-----------VSRTSVVFVSISF 216
Query: 63 LPRAVSLTLFQTELIFY--QQYSSDNIFEIMELRRLCSAAKKALSKIPTKHIKGEDKEIS 120
+ V + + L+FY Q++ N + + RRL AAKKA+SK+ + IK DKE
Sbjct: 217 I---VLMIISLAWLVFYYIQRFRYANARDRNQ-RRLGDAAKKAISKLQIRTIKKGDKETE 272
Query: 121 GDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGF 176
D + CA+CIE YKP+D+VRILPC+H +HK+C+DPWLL+HRTCPMCKM+ILK G
Sbjct: 273 SDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALGI 328
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 129 bits (325), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 106/176 (60%), Gaps = 17/176 (9%)
Query: 3 AVFTYKWKGEELARLLDNGTRIIAKITIASHCNRPYTNINRSQSPSLVTATDLIPISIGD 62
A+ + KG+E+ LL+ + ITI + + Y V+ T ++ +SI
Sbjct: 167 AIMIPEPKGKEIVSLLERNITVTMYITIGTRNLQKY-----------VSRTSVVFVSISF 215
Query: 63 LPRAVSLTLFQTELIFY--QQYSSDNIFEIMELRRLCSAAKKALSKIPTKHIKGEDKEIS 120
+ V + + L+FY Q++ N + + RRL AAKKA+SK+ + I+ DKE
Sbjct: 216 I---VLMIISLAWLVFYYIQRFRYANARDRNQ-RRLGDAAKKAISKLQVRTIRKGDKETE 271
Query: 121 GDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGF 176
D + CA+CIE YKP+D+VRILPC+H +HK+C+DPWLL+HRTCPMCKM+ILK G
Sbjct: 272 SDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALGI 327
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 105/178 (58%), Gaps = 17/178 (9%)
Query: 3 AVFTYKWKGEELARLLDNGTRIIAKITIASHCNRPYTNINRSQSPSLVTATDLIPISIGD 62
A+ + KG EL L++ + ITI + + Y V+ T ++ +SI
Sbjct: 157 AIMIPEPKGRELVLLMERNITVHMHITIGTRNLQKY-----------VSRTSVVFVSISF 205
Query: 63 LPRAVSLTLFQTELIFY--QQYSSDNIFEIMELRRLCSAAKKALSKIPTKHIKGEDKEIS 120
+ + + + L+FY Q++ N + + RRL AAKKA+S++ + I+ D+E
Sbjct: 206 I---ILMIISLAWLVFYYIQRFRYANARDRNQ-RRLGDAAKKAISQLQVRTIRKGDQETE 261
Query: 121 GDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGFVS 178
D + CA+CIE YKP+D+VRILPC+H +HK C+DPWL++HRTCPMCKM+ILK G S
Sbjct: 262 SDFDNCAVCIEGYKPNDVVRILPCRHLFHKCCVDPWLVDHRTCPMCKMNILKALGLTS 319
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 104/180 (57%), Gaps = 17/180 (9%)
Query: 3 AVFTYKWKGEELARLLDNGTRIIAKITIASHCNRPYTNINRSQSPSLVTATDLIPISIGD 62
AV + +G+++ L+ I ++TIA P N +R L+ +SI
Sbjct: 154 AVMITELRGKDILSYLEKN--ISVQMTIAVGTRMPPKNFSRGS---------LVFVSISF 202
Query: 63 LPRAVSLTLFQTELIFY--QQYSSDNIFEIMELRRLCSAAKKALSKIPTKHIKGEDKEIS 120
+ V + + LIFY Q+ N + + RRL AAKKA+SK+ T+ +K DKE
Sbjct: 203 I---VLMIISSAWLIFYFIQKIRYTNARDRNQ-RRLGDAAKKAISKLTTRTVKKGDKETD 258
Query: 121 GDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGFVSYL 180
D + CA+CIE YK +D+VRILPCKH +HK+C+DPWL EH TCPMCK++ILK G V L
Sbjct: 259 PDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNL 318
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 104/180 (57%), Gaps = 17/180 (9%)
Query: 3 AVFTYKWKGEELARLLDNGTRIIAKITIASHCNRPYTNINRSQSPSLVTATDLIPISIGD 62
AV + +G+++ L+ I ++TIA P N +R L+ +SI
Sbjct: 154 AVMITELRGKDILSYLEKN--ISVQMTIAVGTRMPPKNFSRGS---------LVFVSISF 202
Query: 63 LPRAVSLTLFQTELIFY--QQYSSDNIFEIMELRRLCSAAKKALSKIPTKHIKGEDKEIS 120
+ V + + LIFY Q+ N + + RRL AAKKA+SK+ T+ +K DKE
Sbjct: 203 I---VLMIISSAWLIFYFIQKIRYTNARDRNQ-RRLGDAAKKAISKLTTRTVKKGDKETD 258
Query: 121 GDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGFVSYL 180
D + CA+CIE YK +D+VR+LPCKH +HK+C+DPWL EH TCPMCK++ILK G V L
Sbjct: 259 PDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNL 318
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 104/180 (57%), Gaps = 17/180 (9%)
Query: 3 AVFTYKWKGEELARLLDNGTRIIAKITIASHCNRPYTNINRSQSPSLVTATDLIPISIGD 62
AV + +G+++ L+ I ++TIA P N +R L+ +SI
Sbjct: 154 AVMITELRGKDILSYLEKN--ISVQMTIAVGTRMPPKNFSRGS---------LVFVSISF 202
Query: 63 LPRAVSLTLFQTELIFY--QQYSSDNIFEIMELRRLCSAAKKALSKIPTKHIKGEDKEIS 120
+ V + + LIFY Q+ N + + RRL AAKKA+SK+ T+ +K DKE
Sbjct: 203 I---VLMIISSAWLIFYFIQKIRYTNARDRNQ-RRLGDAAKKAISKLTTRTVKKGDKETD 258
Query: 121 GDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGFVSYL 180
D + CA+CIE YK +D+VR+LPCKH +HK+C+DPWL EH TCPMCK++ILK G V L
Sbjct: 259 PDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNL 318
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 63/82 (76%)
Query: 94 RRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCI 153
+RL + AKKA+ K+ + IK DK + DG+ CA+CIE YKPSD+VRIL C H +HKNCI
Sbjct: 228 KRLKAEAKKAIGKLQLRTIKQGDKVLGPDGDSCAVCIEPYKPSDVVRILTCNHFFHKNCI 287
Query: 154 DPWLLEHRTCPMCKMDILKHYG 175
DPWLLEHRTCPMCK DILK G
Sbjct: 288 DPWLLEHRTCPMCKCDILKSLG 309
>sp|Q9D304|RN128_MOUSE E3 ubiquitin-protein ligase RNF128 OS=Mus musculus GN=Rnf128 PE=1
SV=1
Length = 428
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 76 LIFYQQYSSDNI-FEIMELRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYK 134
IFY N + + R+L + AKKA+ K+ + +K DKEI DG+ CA+CIE YK
Sbjct: 226 FIFYSARRLRNARAQSRKQRQLKADAKKAIGKLQLRTLKQGDKEIGPDGDSCAVCIELYK 285
Query: 135 PSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGF 176
P+D+VRIL C H +HK C+DPWLLEHRTCPMCK DILK G
Sbjct: 286 PNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKALGI 327
>sp|Q8TEB7|RN128_HUMAN E3 ubiquitin-protein ligase RNF128 OS=Homo sapiens GN=RNF128 PE=1
SV=1
Length = 428
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 76 LIFYQQYSSDNI-FEIMELRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYK 134
IFY N + + R+L + AKKA+ ++ + +K DKEI DG+ CA+CIE YK
Sbjct: 226 FIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYK 285
Query: 135 PSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGF 176
P+D+VRIL C H +HK C+DPWLLEHRTCPMCK DILK G
Sbjct: 286 PNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKALGI 327
>sp|Q5RF74|RN128_PONAB E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2
SV=1
Length = 428
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 76 LIFYQQYSSDNI-FEIMELRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYK 134
IFY N + + R+L + AKKA+ ++ + +K D+EI DG+ CA+CIE YK
Sbjct: 226 FIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDREIGPDGDSCAVCIELYK 285
Query: 135 PSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGF 176
P+D+VRIL C H +HK C+DPWLLEHRTCPMCK DILK G
Sbjct: 286 PNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKALGI 327
>sp|Q29RU0|RN128_BOVIN E3 ubiquitin-protein ligase RNF128 OS=Bos taurus GN=RNF128 PE=2
SV=1
Length = 431
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 76 LIFYQQYSSDNI-FEIMELRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYK 134
IFY N + + R+L + AKKA+ ++ + K DKEI DG+ CA+CIE YK
Sbjct: 229 FIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTQKQGDKEIGPDGDSCAVCIELYK 288
Query: 135 PSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGF 176
P+D+VRIL C H +HK C+DPWLLEHRTCPMCK DILK G
Sbjct: 289 PNDLVRILTCNHVFHKTCVDPWLLEHRTCPMCKCDILKALGI 330
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 58/76 (76%)
Query: 101 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEH 160
KKA+S++ +K +K I D E CA+CIE YK D+VRILPCKH +H+ CIDPWL+EH
Sbjct: 239 KKAISQLQLHRVKKGEKGIDIDAENCAVCIENYKTKDLVRILPCKHIFHRLCIDPWLIEH 298
Query: 161 RTCPMCKMDILKHYGF 176
RTCPMCK+D++K GF
Sbjct: 299 RTCPMCKLDVIKALGF 314
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%)
Query: 94 RRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCI 153
+RL KKA ++ + +K D+E+S + + C IC E YKP++IVRIL CKH +HKNCI
Sbjct: 224 KRLTRELKKAFGQLQVRILKEGDEEVSPNADSCVICFEAYKPNEIVRILTCKHFFHKNCI 283
Query: 154 DPWLLEHRTCPMCKMDILKHYG 175
DPW+L H TCPMCK DILK G
Sbjct: 284 DPWILAHGTCPMCKCDILKALG 305
>sp|Q95K04|RN133_MACFA E3 ubiquitin-protein ligase RNF133 OS=Macaca fascicularis GN=RNF133
PE=2 SV=1
Length = 376
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 59/82 (71%)
Query: 94 RRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCI 153
+RL + + A ++ + +K D+EI+ +G+ C IC E YKP+DIVRIL CKH +HKNCI
Sbjct: 224 QRLTTDLQNAFGQLQLRVVKEGDEEINPNGDSCVICFEHYKPNDIVRILTCKHFFHKNCI 283
Query: 154 DPWLLEHRTCPMCKMDILKHYG 175
DPW+L H TCP+CK DILK G
Sbjct: 284 DPWILSHGTCPICKCDILKVLG 305
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%)
Query: 94 RRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCI 153
+RL KKA ++ + +K D+E++ + + C IC E YKP++IVRIL CKH +HKNCI
Sbjct: 224 KRLTRELKKAFGQLQVRVLKEGDEEVNPNADSCVICFEAYKPNEIVRILTCKHFFHKNCI 283
Query: 154 DPWLLEHRTCPMCKMDILKHYG 175
DPW+L H TCPMCK DILK G
Sbjct: 284 DPWILAHGTCPMCKCDILKALG 305
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 101 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEH 160
KK + ++P +K +K I D E CA+CIE +K D++RILPCKH +H+ CIDPWLL+H
Sbjct: 240 KKVIGQLPLHTVKHGEKGIDVDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDH 299
Query: 161 RTCPMCKMDILKHYGF 176
RTCPMCK+D++K G+
Sbjct: 300 RTCPMCKLDVIKALGY 315
>sp|Q8WVZ7|RN133_HUMAN E3 ubiquitin-protein ligase RNF133 OS=Homo sapiens GN=RNF133 PE=2
SV=1
Length = 376
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 60/89 (67%)
Query: 94 RRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCI 153
+RL + + ++ + +K D+EI+ +G+ C IC E YKP+DIVRIL CKH +HKNCI
Sbjct: 224 QRLTTDLQNTFGQLQLRVVKEGDEEINPNGDSCVICFERYKPNDIVRILTCKHFFHKNCI 283
Query: 154 DPWLLEHRTCPMCKMDILKHYGFVSYLTN 182
DPW+L H TCP+CK DILK G + N
Sbjct: 284 DPWILPHGTCPICKCDILKVLGIQVVVEN 312
>sp|Q2TA44|RN148_BOVIN RING finger protein 148 OS=Bos taurus GN=RNF148 PE=2 SV=1
Length = 303
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%)
Query: 88 FEIMELRRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHE 147
F R+L + +KA+ K+ + ++ DKE+ D + C +C + YKP D+VRIL CKH
Sbjct: 218 FSTRRQRQLKADVRKAIGKLQLRVLQEGDKELEPDEDNCVVCFDIYKPQDVVRILTCKHI 277
Query: 148 YHKNCIDPWLLEHRTCPMCKMDILK 172
+HK CIDPWLL HRTCPMCK DIL+
Sbjct: 278 FHKACIDPWLLAHRTCPMCKCDILQ 302
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 56/76 (73%)
Query: 101 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEH 160
KK + ++ +K +K I D E CA+CIE +K DI+RILPCKH +H+ CIDPWLL+H
Sbjct: 244 KKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDH 303
Query: 161 RTCPMCKMDILKHYGF 176
RTCPMCK+D++K G+
Sbjct: 304 RTCPMCKLDVIKALGY 319
>sp|G3X9R7|RN148_MOUSE RING finger protein 148 OS=Mus musculus GN=Rnf148 PE=2 SV=1
Length = 316
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%)
Query: 94 RRLCSAAKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCI 153
R+L + KKA+ ++ + ++ DKE+ + + C +C + YK D++RIL CKH +HK CI
Sbjct: 237 RQLKADVKKAIGQLQLRVLQDGDKELDPNEDSCVVCFDMYKAQDVIRILTCKHFFHKTCI 296
Query: 154 DPWLLEHRTCPMCKMDILK 172
DPWLL HRTCPMCK DILK
Sbjct: 297 DPWLLAHRTCPMCKCDILK 315
>sp|Q8N7C7|RN148_HUMAN RING finger protein 148 OS=Homo sapiens GN=RNF148 PE=2 SV=2
Length = 305
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 53/73 (72%)
Query: 100 AKKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLE 159
KKA+ ++ + +K D+E+ + + C +C + YKP D+VRIL CKH +HK CIDPWLL
Sbjct: 232 VKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLA 291
Query: 160 HRTCPMCKMDILK 172
HRTCPMCK DILK
Sbjct: 292 HRTCPMCKCDILK 304
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 14/87 (16%)
Query: 100 AKKALSKIPTKHIKGEDKEISGDGEC-------------CAICIEFYKPSDIVRILPCKH 146
A +AL K+ T+ K + K +S +G C CAIC+E Y + +R++PC H
Sbjct: 164 AVQALEKMETRKFKAKGK-VSREGSCGGLDTLSSSSISDCAICLEKYIDGEELRVIPCTH 222
Query: 147 EYHKNCIDPWLLEHRTCPMCKMDILKH 173
+HK C+DPWLL++ TCP C+ +I++
Sbjct: 223 RFHKRCVDPWLLQNHTCPHCRHNIIEQ 249
>sp|Q5SPX3|RN215_MOUSE RING finger protein 215 OS=Mus musculus GN=Rnf215 PE=2 SV=1
Length = 379
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 124 ECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDIL-KHY 174
E CA+C++++ +R+LPCKHE+H++C+DPWL+ +TCP+CK ++L HY
Sbjct: 325 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVLGNHY 376
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 73.9 bits (180), Expect = 5e-13, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 120 SGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYG 175
SG CAIC+E Y + +R++PC H +H+ C+DPWLL+H TCP C+ +I++ G
Sbjct: 284 SGSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKG 339
>sp|Q9Y6U7|RN215_HUMAN RING finger protein 215 OS=Homo sapiens GN=RNF215 PE=2 SV=2
Length = 377
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 40/50 (80%)
Query: 124 ECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKH 173
E CA+C++++ +R+LPCKHE+H++C+DPWL+ +TCP+CK ++L +
Sbjct: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVLGN 372
>sp|Q08D68|ZNRF3_XENTR E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis GN=znrf3
PE=2 SV=1
Length = 853
Score = 73.2 bits (178), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 14/87 (16%)
Query: 100 AKKALSKIPTKHIKGEDKEISGDGEC-------------CAICIEFYKPSDIVRILPCKH 146
A +AL K+ T+ K + K + +G C CAIC+E Y + +R++PC H
Sbjct: 228 AVQALEKMETRKFKAKGK-VPREGSCGGLDTLSSSSTSDCAICLEKYIDGEELRVIPCTH 286
Query: 147 EYHKNCIDPWLLEHRTCPMCKMDILKH 173
+HK C+DPWLL++ TCP C+ +I++
Sbjct: 287 RFHKRCVDPWLLQNHTCPHCRHNIIEQ 313
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 14/89 (15%)
Query: 100 AKKALSKIPTKHIKGEDKEISGDGEC-------------CAICIEFYKPSDIVRILPCKH 146
A +AL K+ T+ + K +G C CAIC+E Y + +R++PC H
Sbjct: 255 AVQALEKMETRKFNSKSKG-RREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTH 313
Query: 147 EYHKNCIDPWLLEHRTCPMCKMDILKHYG 175
+H+ C+DPWLL+H TCP C+ +I++ G
Sbjct: 314 RFHRKCVDPWLLQHHTCPHCRHNIIEQKG 342
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 126 CAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDIL 171
CAIC+E Y + +R++PC H +HK C+DPWLL+H TCP C+ +I+
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNII 312
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 70.1 bits (170), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 103 ALSKIPTKHIKGEDKEISGD----------GECCAICIEFYKPSDIVRILPCKHEYHKNC 152
A+S++ T+ + ++ G+ CAIC+E + +R++ C HE+H+NC
Sbjct: 239 AISQLATRRYQASCRQARGEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRNC 298
Query: 153 IDPWLLEHRTCPMCKMDILKHYGFVSYL 180
+DPWL +HRTCP+C +I + F L
Sbjct: 299 VDPWLHQHRTCPLCMFNITEGDSFSQSL 326
>sp|Q5NCP0|RNF43_MOUSE E3 ubiquitin-protein ligase RNF43 OS=Mus musculus GN=Rnf43 PE=2
SV=1
Length = 784
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 126 CAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILKHYGF 176
CAIC+E + +R++ C HE+H+ C+DPWL +HRTCP+C +I++ F
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLCMFNIVEGDSF 322
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 88 FEIMELRRLCSAAKKALSKIPTKHI---KGEDKEISGDGECCAICIEFYKPSDIVRILPC 144
+++++ CS AK+A + + + E K+ + D C++C+E +IVR LPC
Sbjct: 170 YKVLDPENGCSLAKQASTSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPC 229
Query: 145 KHEYHKNCIDPWLLEHRTCPMCK 167
H++H CIDPWL + TCP+CK
Sbjct: 230 LHQFHAGCIDPWLRQQGTCPVCK 252
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 101 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEH 160
+ L+K K I D + + + CAIC++ Y+ D +RILPC H YH C+DPWL +
Sbjct: 205 RNRLTKEQLKQIPTHDYQKGDEYDVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQT 264
Query: 161 R-TCPMCKMDI 170
R TCP+CK +
Sbjct: 265 RKTCPICKQPV 275
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 101 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEH 160
K+ L +IPT + D+ + CAIC++ Y+ D +R+LPC H YH C+DPWL +
Sbjct: 210 KEQLKQIPTHDYQKGDQY-----DVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQT 264
Query: 161 R-TCPMCKMDILKHYG 175
R TCP+CK + + G
Sbjct: 265 RKTCPICKQPVHRGPG 280
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 101 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEH 160
+ L+K K I D + + + CAIC++ Y+ D +R+LPC H YH C+DPWL +
Sbjct: 205 RNRLTKEQLKQIPTHDYQKGDEYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQT 264
Query: 161 R-TCPMCKMDI 170
R TCP+CK +
Sbjct: 265 RKTCPICKQPV 275
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 101 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLE- 159
K L K+P K D+ + CAIC+E Y+ D +RILPC H YH C+DPWL +
Sbjct: 220 KDQLKKLPVHKFKKGDEY-----DVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKT 274
Query: 160 HRTCPMCKMDILKHYG 175
+TCP+CK ++ G
Sbjct: 275 KKTCPVCKQKVVPSQG 290
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 101 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLE- 159
K L K+P K D+ + CAIC+E Y+ D +RILPC H YH C+DPWL +
Sbjct: 220 KDQLKKLPVHKFKKGDEY-----DVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKT 274
Query: 160 HRTCPMCKMDILKHYG 175
+TCP+CK ++ G
Sbjct: 275 KKTCPVCKQKVVPSQG 290
>sp|Q8BP31|RN122_MOUSE RING finger protein 122 OS=Mus musculus GN=Rnf122 PE=2 SV=1
Length = 155
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 57 PISIGDLPRAVSLTLFQTELIFYQQYSSDNIFEIMELRRLCSAAKKALSKIPTKHIKGED 116
PIS DLP + + +F T + + + I +LR + + ++ +KG+
Sbjct: 27 PISFQDLPLNIYMVIFGTGIFVFMLSLIFCCYFISKLRNQAQSERYGYKEVV---LKGDA 83
Query: 117 KEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDI 170
K++ G+ CA+C+E +K D + +LPC+H +H+ C+ WL CPMC I
Sbjct: 84 KKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPI 137
>sp|Q9H9V4|RN122_HUMAN RING finger protein 122 OS=Homo sapiens GN=RNF122 PE=2 SV=2
Length = 155
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 57 PISIGDLPRAVSLTLFQTELIFYQQYSSDNIFEIMELRRLCSAAKKALSKIPTKHIKGED 116
PIS DLP + + +F T + + + I +LR + + ++ +KG+
Sbjct: 27 PISFQDLPLNIYMVIFGTGIFVFMLSLIFCCYFISKLRNQAQSERYGYKEVV---LKGDA 83
Query: 117 KEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDI 170
K++ G+ CA+C+E +K D + +LPC+H +H+ C+ WL CPMC I
Sbjct: 84 KKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPI 137
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 79 YQQYSSDNIFEIMELRRLCSAAKKALSKIPTKH--IKGEDKEISGDGECCAICIEFYKPS 136
++ SD + ++E+ L K K+P + + ++ S CC+IC+ YK
Sbjct: 82 FEDDESDTV--VVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKM 139
Query: 137 DIVRILP-CKHEYHKNCIDPWLLEHRTCPMCKMDIL 171
D++R+LP C H +H NC+DPWL H TCP+C+ L
Sbjct: 140 DMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPL 175
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 101 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLE- 159
K L K+P K D + + CAIC++ Y+ D +RILPC H YH C+DPWL +
Sbjct: 220 KDQLKKLPVHKFKKGD-----EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKT 274
Query: 160 HRTCPMCKMDILKHYG 175
+TCP+CK ++ G
Sbjct: 275 KKTCPVCKQKVVPSQG 290
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 101 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLE- 159
K L K+P K D+ + CAIC++ Y+ D +RILPC H YH C+DPWL +
Sbjct: 220 KDQLKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKT 274
Query: 160 HRTCPMCKMDILKHYG 175
+TCP+CK ++ G
Sbjct: 275 KKTCPVCKQKVVPSQG 290
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 101 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLE- 159
K L K+P K D+ + CAIC++ Y+ D +RILPC H YH C+DPWL +
Sbjct: 220 KDQLKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKT 274
Query: 160 HRTCPMCKMDILKHYG 175
+TCP+CK ++ G
Sbjct: 275 KKTCPVCKQKVVPSQG 290
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 101 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLE- 159
K L K+P K D+ + CAIC++ Y+ D +RILPC H YH C+DPWL +
Sbjct: 220 KDQLKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKT 274
Query: 160 HRTCPMCKMDILKHYG 175
+TCP+CK ++ G
Sbjct: 275 KKTCPVCKQKVVPSQG 290
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 95 RLCSAAKKALSKIPTKHIKGE--DKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNC 152
R+ K+ + + T+H + D E+ G+ C++CI Y + +R LPC HE+H +C
Sbjct: 602 RIRGLTKEQIDNLSTRHYEHNSIDSEL---GKICSVCISDYVTGNKLRQLPCMHEFHIHC 658
Query: 153 IDPWLLEHRTCPMCKMDIL 171
ID WL E+ TCP+C+ +L
Sbjct: 659 IDRWLSENCTCPICRQPVL 677
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 10/99 (10%)
Query: 80 QQYSSDNIFEIMELRRLC-SAAKKALS-----KIPTKHIKGEDK-EISGDGECCAICIEF 132
Q + D+ FE EL + + K L+ KIP I G++ + SG+ + C++C++
Sbjct: 140 QMGAVDSTFE--ELSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQD 197
Query: 133 YKPSDIVRILP-CKHEYHKNCIDPWLLEHRTCPMCKMDI 170
++ + VR LP C H +H CID WL H +CPMC+ D+
Sbjct: 198 FQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 63.5 bits (153), Expect = 7e-10, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 126 CAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDIL 171
C++CI Y + +R LPC HEYH +CID WL E+ TCP+C+ +L
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 615
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 63.2 bits (152), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 101 KKALSKIPTKHIKGEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEH 160
K+ + + T++ GE+ + + C++CI Y + +R LPC HEYH +CID WL E+
Sbjct: 565 KEQIDNLSTRNF-GENDAL----KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 619
Query: 161 RTCPMCKMDIL 171
TCP+C+ +L
Sbjct: 620 STCPICRRAVL 630
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 114 GEDKEISGDGECCAICIEFYKPSDIVRILPCKHEYHKNCIDPWLLEHRTCPMCKMDILK 172
G D E+ G+ C++CI Y + +R LPC HE+H +CID WL E+ TCP+C+ +L+
Sbjct: 605 GVDSEL---GKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVLE 660
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 104 LSKIPTKHIKGEDK-EISGDGECCAICIEFYKPSDIVRILP-CKHEYHKNCIDPWLLEHR 161
+ KIP I G + + S + + C++C++ ++ + VR LP C H +H CID WLL H
Sbjct: 173 VEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHG 232
Query: 162 TCPMCKMDI 170
+CPMC+ DI
Sbjct: 233 SCPMCRRDI 241
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,219,134
Number of Sequences: 539616
Number of extensions: 2625823
Number of successful extensions: 5677
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 5191
Number of HSP's gapped (non-prelim): 543
length of query: 183
length of database: 191,569,459
effective HSP length: 110
effective length of query: 73
effective length of database: 132,211,699
effective search space: 9651454027
effective search space used: 9651454027
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)