RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4227
(157 letters)
>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 93
Score = 86.7 bits (214), Expect = 1e-23
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVLPTT 87
+ LYP+EA+N DE++ DI+ + + + GW G G G FP N+V +P++
Sbjct: 6 SGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSS 65
Query: 88 DETSIKSEKPSPAKSTTNRIRDSITKPS 115
+ S K + T + + + PS
Sbjct: 66 ENEKAVSPKKALLPPTVS--LSATSGPS 91
>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 83.3 bits (206), Expect = 8e-23
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 29 RCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVL 84
+ LY + + +L ++ D++ ++ + WW G ++GR G+FP N+V ++
Sbjct: 3 KAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV 58
>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 74
Score = 82.9 bits (205), Expect = 2e-22
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 29 RCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVLPTTD 88
+ + L + A+ ++ L + DI+ ++ + WW GE+HG G FP ++V ++P ++
Sbjct: 12 KAQALCSWTAKKDNHLNFSKHDIITVLE---QQENWWFGEVHGGRGWFPKSYVKIIPGSE 68
Query: 89 E 89
Sbjct: 69 S 69
>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 76
Score = 82.2 bits (203), Expect = 3e-22
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 29 RCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVLPTTD 88
K + ++ NEDEL++ + DI+ + + GWW+G L+GR G FP N+V + +++
Sbjct: 12 IVKARFNFKQTNEDELSVCKGDIIYVTRV--EEGGWWEGTLNGRTGWFPSNYVREIKSSE 69
Query: 89 ETSIKS 94
+ S
Sbjct: 70 RSGPSS 75
>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 63
Score = 81.8 bits (202), Expect = 4e-22
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 27 KERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDK-GWWKGELHGRVGLFPDNFVTVLP 85
K L+ YE QN+DEL +KE D + +I R+ D+ WW L+ + G P N + + P
Sbjct: 4 KGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLYP 63
>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 80.9 bits (200), Expect = 8e-22
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 30 CKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVL 84
+ LY +EA EDEL + ++V ++ + WW G LH ++GLFP N+V +
Sbjct: 4 ARALYDFEALEEDELGFRSGEVVEVLDS--SNPSWWTGRLHNKLGLFPANYVAPM 56
>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 80.1 bits (198), Expect = 1e-21
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 30 CKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVT 82
+ L+ ++ Q + EL + D + ++ D WWKG HG+ G+FP N+VT
Sbjct: 4 VQALFDFDPQEDGELGFRRGDFIHVMDNS--DPNWWKGACHGQTGMFPRNYVT 54
>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 80.1 bits (198), Expect = 1e-21
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 29 RCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTV 83
Y ++A +DEL+ K DI+ +++ + D+ W+K EL+G+ G P N++ +
Sbjct: 2 EAIAKYDFKATADDELSFKRGDILKVLNEE-CDQNWYKAELNGKDGFIPKNYIEM 55
>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 69
Score = 80.2 bits (198), Expect = 2e-21
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVLPT 86
E LYPY + +LT E + +++ + D WW G + R G+FP N+V +
Sbjct: 9 EEYIALYPYSSVEPGDLTFTEGEEILVTQK---DGEWWTGSIGDRSGIFPSNYVKPKDS 64
>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 58
Score = 79.7 bits (197), Expect = 2e-21
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 29 RCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVT 82
R + LY +EA ++ELT K +++ ++ D WW+GE H GLFP NFVT
Sbjct: 4 RVRALYDFEAVEDNELTFKHGELITVLDDS--DANWWQGENHRGTGLFPSNFVT 55
>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 98
Score = 80.7 bits (199), Expect = 3e-21
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVLPTT 87
+ +Y Y A NEDEL+ + ++ ++++D D WW+GE++G GLFP N+V + +
Sbjct: 35 CQVIAMYDYAANNEDELSFSKGQLINVMNKD--DPDWWQGEINGVTGLFPSNYVKMTTDS 92
Query: 88 DETS 91
S
Sbjct: 93 SGPS 96
Score = 31.4 bits (71), Expect = 0.012
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 71 GRVGLFPDNFVTVLPTTDETSIKSEKPSP 99
G+ G FP + V +L + E + + P
Sbjct: 7 GQKGWFPASHVKLLGPSSERATPAFHPVC 35
>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 79.1 bits (195), Expect = 4e-21
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 24 PVLKERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRV-GLFPDNFVT 82
P K K L+ Y+AQ EDELT + I+ + + + GWW+G+ G+ FP N+V
Sbjct: 3 PTFKCAVKALFDYKAQREDELTFIKSAIIQNVEKQ--EGGWWRGDYGGKKQLWFPSNYVE 60
Query: 83 VLPTTDE 89
+ +
Sbjct: 61 EMVNPEG 67
>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Caenorhabditis
elegans, SEM-5 [TaxId: 6239]}
Length = 58
Score = 78.2 bits (193), Expect = 8e-21
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 30 CKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVL 84
+ L+ + Q EL K D++ LI++D D WW+G+L+ R G+FP N+V
Sbjct: 5 VQALFDFNPQESGELAFKRGDVITLINKD--DPNWWEGQLNNRRGIFPSNYVCPY 57
>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 72
Score = 78.4 bits (193), Expect = 1e-20
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVLPTT 87
+ K LY +A+++ EL+ + + GW +G L+G+ GL P+N+V L
Sbjct: 11 RKAKALYACKAEHDSELSFTAGTVFDNVHPSQEP-GWLEGTLNGKTGLIPENYVEFLSGP 69
Query: 88 D 88
Sbjct: 70 S 70
>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 55
Score = 76.7 bits (189), Expect = 3e-20
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVL 84
E LY Y+ ++ E+T+K+ DI+ L++ +K WWK E++ R G P +V L
Sbjct: 1 ELVLALYDYQEKSPREVTMKKGDILTLLNS--TNKDWWKVEVNDRQGFVPAAYVKKL 55
>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId:
9606]}
Length = 62
Score = 76.3 bits (188), Expect = 5e-20
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVLPT 86
+ + L+ YEA ++L +E DI++++S+ ++ W +GE G+VG+FP FV T
Sbjct: 6 SQVEALFSYEATQPEDLEFQEGDIILVLSKV--NEEWLEGESKGKVGIFPKVFVEDSAT 62
>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 71
Score = 76.4 bits (188), Expect = 5e-20
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGE-LHGRVGLFPDNFVTVLP 85
+ LYP+ + E+EL ++ + + +I + D WWK + G+VGL P N+V VL
Sbjct: 7 HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS 65
>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 74.5 bits (183), Expect = 3e-19
Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 27 KERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPD--KGWWKGELHGRVGLFPDNFVTVL 84
+ +Y ++A+N +EL++ + ++ WW E++G+ G P N++
Sbjct: 13 NQVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKT 72
Query: 85 PT 86
+
Sbjct: 73 ES 74
>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 80
Score = 74.6 bits (183), Expect = 4e-19
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGR-----VGLFPDNFVT 82
E +V Y A ++L+L +++++ ++ GWW+GEL R G FP + V
Sbjct: 8 EIAQVTSAYVASGSEQLSLAPGQLILILKKN--TSGWWQGELQARGKKRQKGWFPASHVK 65
Query: 83 VLPTTDETS 91
+L + E +
Sbjct: 66 LLGPSSERA 74
>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 73.6 bits (181), Expect = 5e-19
Identities = 9/53 (16%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 32 VLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVL 84
LY + A ++ L++ + + + ++ + W + + G P N++T +
Sbjct: 5 ALYDFVASGDNTLSITKGEKLRVLGYNHNG-EWCEAQTKNGQGWVPSNYITPV 56
>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 57
Score = 72.8 bits (179), Expect = 9e-19
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGE-LHGRVGLFPDNFV 81
E + L+ + +E++L K+ DI+ + + ++ WW E G+ G+ P +V
Sbjct: 2 EYVRALFDFNGNDEEDLPFKKGDILRIRDKP--EEQWWNAEDSEGKRGMIPVPYV 54
>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 72.9 bits (179), Expect = 1e-18
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 30 CKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELH--GRVGLFPDNFVTVL 84
Y Y+A ++ELT E D ++ I D WW GEL G GLFP N+V++
Sbjct: 3 ATAEYDYDAAEDNELTFVENDKIINIEFV--DDDWWLGELEKDGSKGLFPSNYVSLG 57
>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 74.7 bits (183), Expect = 1e-18
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVLPTT 87
E + Y A DE++L E + V +I + GWW G FP ++
Sbjct: 15 EPYVAIKAYTAVEGDEVSLLEGEAVEVIHKL--LDGWWVIRKDDVTGYFPSMYLQKSGQD 72
Query: 88 DETSIKSEKP-SPAKSTTNRIRDSITKPS 115
+ + K +P + ++ R SI + S
Sbjct: 73 VSQAQRQIKRGAPPRRSSIRNAHSIHQRS 101
>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 57
Score = 71.7 bits (176), Expect = 3e-18
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 32 VLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVT 82
LY YEA ED+L+ + + +++ D + G G P N+V
Sbjct: 5 ALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVA 55
>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 60
Score = 71.3 bits (175), Expect = 4e-18
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGEL--HGRVGLFPDNFVTVL 84
+ + +Y Y A + DE++ K+ D ++ + D+GW G + GR G+ P N+V +
Sbjct: 4 KIFRAMYDYMAADADEVSFKDGDAIINVQAI--DEGWMYGTVQRTGRTGMLPANYVEAI 60
>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 67
Score = 71.0 bits (174), Expect = 6e-18
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 24 PVLKERCKVLYPYEAQN-EDELTLKEEDIVVLISRDAP---DKGWWKGEL-HGRVGLFPD 78
P E + LY + +N E E+ LK+ D++ ++S+ P D WWK +G +G P
Sbjct: 2 PSKLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPY 61
Query: 79 NFVTVL 84
N++ ++
Sbjct: 62 NYIEII 67
>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 67
Score = 70.6 bits (173), Expect = 1e-17
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKG-ELHGRVGLFPDNFVTVLPT 86
++ LY Y N ++L L++ D ++ + WW+ + +G+ G P N+VT
Sbjct: 9 KKVVALYDYMPMNANDLQLRKGDEYFILEES--NLPWWRARDKNGQEGYIPSNYVTEAED 66
Query: 87 T 87
+
Sbjct: 67 S 67
>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 83
Score = 70.8 bits (173), Expect = 1e-17
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Query: 24 PVLKERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDK---GWWKG----------ELH 70
P + + + Y A + DEL LK D+V++I P++ GW G EL
Sbjct: 9 PGFMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELE 68
Query: 71 GRVGLFPDNFVTVL 84
G+FP+NF +
Sbjct: 69 KCRGVFPENFTERV 82
>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 69.5 bits (170), Expect = 2e-17
Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVL 84
+ + + YE + E+ L D+V ++ + + GWW ++ + G P +F+ L
Sbjct: 3 QTYRAIADYEKTSGSEMALSTGDVVEVVEKS--ESGWWFCQMKAKRGWIPASFLEPL 57
>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 53
Score = 68.8 bits (168), Expect = 3e-17
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFV 81
E + Y A DE++L E + V +I + GWW G FP ++
Sbjct: 1 EPYVAIKAYTAVEGDEVSLLEGEAVEVIHKL--LDGWWVIRKDDVTGYFPSMYL 52
>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 71
Score = 69.1 bits (169), Expect = 4e-17
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 29 RCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELH-GRVGLFPDNFVTVLP 85
C Y + E +L + D++ +++ D W+K + GR G+ P N+V
Sbjct: 8 ECIAKYNFHGTAEQDLPFCKGDVLTIVAVT-KDPNWYKAKNKVGREGIIPANYVQKRE 64
>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 68.7 bits (168), Expect = 4e-17
Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 24 PVLKERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFV 81
P+ L+ YE ++ +L ++ + + ++ + + + G+ G P NFV
Sbjct: 3 PLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQS-GEWWKAQSLTTGQEGFIPFNFV 59
>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN
cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 72
Score = 68.3 bits (167), Expect = 7e-17
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 28 ERCKVLYPYEA-QNEDELTLKEEDIVVLISRDAPDKGWWKGEL--HGRVGLFPDNFVTVL 84
++ K ++P+ A N+ L+ + D++ L+ + D GW GE G FP ++ +L
Sbjct: 8 QKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKD-GWLYGEHDTTKARGWFPSSYTKLL 66
Query: 85 P 85
Sbjct: 67 S 67
>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 67.5 bits (165), Expect = 1e-16
Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVLPTT 87
E +Y ++A +L L+ +++ ++ W + +G G P N+VT +
Sbjct: 3 EIVVAMYDFQATEAHDLRLERGQEYIILEKNDLH-WWRARDKYGSEGYIPSNYVTGKKSN 61
Query: 88 D 88
+
Sbjct: 62 N 62
>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 56
Score = 67.2 bits (164), Expect = 1e-16
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 31 KVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWK-GELHGRVGLFPDNFVTV 83
KVLY Y +++DE+T+ D + L++RD + G GL P ++ +
Sbjct: 3 KVLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI 56
>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 64
Score = 67.1 bits (164), Expect = 2e-16
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 32 VLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGEL--HGRVGLFPDNFVTVLPTTD 88
LY YE++ E +L+ K+ + + +++ + WW G+ G P N+V +
Sbjct: 7 ALYDYESRTETDLSFKKGERLQIVNNT--EGDWWLAHSLSTGQTGYIPSNYVAPSDSIQ 63
>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 59
Score = 66.5 bits (162), Expect = 3e-16
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 27 KERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVLPT 86
K+ K Y + A+N EL++ ++D++ ++ + W G G P+N + ++ T
Sbjct: 1 KKYAKSKYDFVARNSSELSVMKDDVLEILDD--RRQWWKVRNASGDSGFVPNNILDIMRT 58
>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human
(Homo sapiens) [TaxId: 9606]}
Length = 65
Score = 65.6 bits (160), Expect = 6e-16
Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 31 KVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFVTVLPTTD 88
LY YEA + ++L+ ++ D +V++ ++ + + + G P N+V + + +
Sbjct: 8 VALYDYEAIHHEDLSFQKGDQMVVL-EESGEWWKARSLATRKEGYIPSNYVARVDSLE 64
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus
musculus [TaxId: 10090]}
Length = 53
Score = 64.1 bits (156), Expect = 2e-15
Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 31 KVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGELH-GRVGLFPDNFVT 82
LY Y+ + EL L+ ++ L+ + WW+ + G G P +++
Sbjct: 2 IALYDYQTNDPQELALRCDEEYYLLDS--SEIHWWRVQDKNGHEGYAPSSYLV 52
>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 96
Score = 65.1 bits (158), Expect = 3e-15
Identities = 18/77 (23%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 28 ERCKVLYPYEAQ------NEDELTLKEEDIVVLISRDAPDKGWWKGELHGRVGLFPDNFV 81
C Y Y E EL L + + D + L G+ GL P NFV
Sbjct: 18 HLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFV 77
Query: 82 TVLPTTDETSIKSEKPS 98
+ + + PS
Sbjct: 78 DFVQDNESRLASTSGPS 94
>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 69
Score = 63.0 bits (153), Expect = 1e-14
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 33 LYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWKGEL--HGRVGLFPDNFV 81
+ P L L DIV L +A WW+G VG FP N V
Sbjct: 16 IPPPPGAFGPFLRLNPGDIVELTKAEAEH-NWWEGRNTATNEVGWFPCNRV 65
>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha
subunit, pi3k), SH3 domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 83
Score = 61.3 bits (148), Expect = 6e-14
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 15/73 (20%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAP-------------DKGWWKG--ELHGR 72
+ + LY Y+ + E+++ L DI+ + + GW G E G
Sbjct: 4 YQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGE 63
Query: 73 VGLFPDNFVTVLP 85
G FP +V +
Sbjct: 64 RGDFPGTYVEYIG 76
>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 59.8 bits (144), Expect = 3e-13
Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 27 KERCKVLYPYEAQNEDELTLKEEDIVVLISRD--APDKGWWKGELHGRVGLFPDNFVTVL 84
++ + + A + +++L E D+V +I + + W + G +F+
Sbjct: 17 EKLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPY 76
Query: 85 PTTDETSIKSEKPS 98
S S PS
Sbjct: 77 NPRRSHSDASSGPS 90
>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 74
Score = 58.6 bits (141), Expect = 5e-13
Identities = 9/68 (13%), Positives = 25/68 (36%), Gaps = 10/68 (14%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWWK------GELHGRVGLFPDNFV 81
V+ Y A E+E+ + + ++V +++ + + G P + +
Sbjct: 8 STMTVIKDYYALKENEICVSQGEVVQVLAVNQQN--MCLVYQPASDHSPAAEGWVPGSIL 65
Query: 82 TVL--PTT 87
P++
Sbjct: 66 APFSGPSS 73
>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 53.6 bits (128), Expect = 9e-11
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 11/80 (13%)
Query: 28 ERCKVLYPYEAQNEDELTLKEEDIVVLISRDAPDKGWW---------KGELHGRVGLFPD 78
L Y A + LT+ +V + S+ + G+L R+G FP
Sbjct: 22 SMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPS 81
Query: 79 NFVTVL--PTTDETSIKSEK 96
+ V + +K++K
Sbjct: 82 SIVREDQTLKPGKVDVKTDK 101
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 96
Score = 45.1 bits (106), Expect = 1e-07
Identities = 12/92 (13%), Positives = 24/92 (26%), Gaps = 13/92 (14%)
Query: 30 CKVLYPYEAQNED-----ELTLKEEDIVVLISRDAPDKGWWKGEL------HGRVGLFPD 78
+ L+ Y+ + L+ + D++ +I + WW+ +G P
Sbjct: 4 IRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEE--WWQARRVHSDSETDDIGFIPS 61
Query: 79 NFVTVLPTTDETSIKSEKPSPAKSTTNRIRDS 110
K S S
Sbjct: 62 KRRVERREWSRLKAKDWGSSSGSQGREDSVLS 93
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium
channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 96
Score = 41.1 bits (96), Expect = 3e-06
Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 12/64 (18%)
Query: 29 RCKVLYPYEAQNEDE-------LTLKEEDIVVLISRDAPDKGWWKGEL---HGRVGLFPD 78
+ Y A ED+ ++ + +D + + + + WW G L +G P
Sbjct: 23 AVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKF--NNDWWIGRLVKEGCEIGFIPS 80
Query: 79 NFVT 82
Sbjct: 81 PVKL 84
>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 145
Score = 38.6 bits (89), Expect = 7e-05
Identities = 17/118 (14%), Positives = 35/118 (29%), Gaps = 13/118 (11%)
Query: 29 RCKVLYPYEAQNED-------ELTLKEEDIVVLISRDAPDKGWWKGEL---HGRVGLFPD 78
K Y ++ ++ +D + + + + WW G L +G P
Sbjct: 25 AVKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKY--NNDWWIGRLVKEGCEIGFIPS 82
Query: 79 NFVTVLPTTDETSIKSEKPSPAKSTTNRIRDSITKPSDTTAALRKSLDLTNKKEGESL 136
+ K ++ KS+ N S T A + +K + +
Sbjct: 83 PLRLENIRI-QQEQKRKRFHGGKSSGNSSSSLGEMVSGTFRATPTTTAKQKQKVTKHI 139
>d3bn0a1 d.27.1.1 (A:2-102) Ribosomal protein S16 {Aquifex aeolicus
[TaxId: 63363]}
Length = 101
Score = 24.4 bits (53), Expect = 3.9
Identities = 5/43 (11%), Positives = 15/43 (34%), Gaps = 4/43 (9%)
Query: 113 KPSDTTAALRKSLDLTNKKEGESLDLTNKKKKKKKKKKKKKKK 155
+ S A+ + + + E + K+ +K++
Sbjct: 63 ELSHRAKAILWNHGILKEVVPE----GYEMKRVGDYYVFEKRE 101
>d2btva_ e.28.1.1 (A:) BTV vp3 {Bluetongue virus, strain 1 [TaxId:
40051]}
Length = 845
Score = 25.2 bits (55), Expect = 5.2
Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 10/59 (16%)
Query: 74 GLFPDNFVTVLPTTDETSIKSEKP-------SPAKSTTNRIRDSITKPS---DTTAALR 122
PD+ V + PT T + K + NR + D T +L+
Sbjct: 777 SNTPDSLVLINPTYTMTKVFINKRIVERVRVGQILAVLNRRFVAYKGKMRIMDITQSLK 835
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.310 0.129 0.359
Gapped
Lambda K H
0.267 0.0634 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 573,255
Number of extensions: 26507
Number of successful extensions: 393
Number of sequences better than 10.0: 1
Number of HSP's gapped: 287
Number of HSP's successfully gapped: 102
Length of query: 157
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 79
Effective length of database: 1,336,656
Effective search space: 105595824
Effective search space used: 105595824
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 49 (22.9 bits)