BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4233
(303 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195127640|ref|XP_002008276.1| GI13402 [Drosophila mojavensis]
gi|193919885|gb|EDW18752.1| GI13402 [Drosophila mojavensis]
Length = 417
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/299 (61%), Positives = 232/299 (77%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK GSQ+I+PYRG+ D L++CGDL
Sbjct: 52 MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGSQMILPYRGDDSDAIRLKVCGDL 111
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF YH + IR+A+K+SNVVINL+GR++ TKNF D NV ARLA + +E G
Sbjct: 112 GQVLFHFYHLDDPRSIREAVKHSNVVINLVGRDYETKNFRFKDVNVNGAARLASICRESG 171
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+SALNA+ NP +YISGGSQ+ +TKY+GE V FP ATI RP+D+YGS D+F
Sbjct: 172 VERFIHLSALNAEANPKPHYISGGSQWLKTKYEGELMVRDAFPNATIIRPADIYGSEDRF 231
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ KGE T+KQPVYV DVA AIV A KDPD AG+IYQAVGPKRY
Sbjct: 232 LRYYAHIWRRQFRSMPLWHKGERTVKQPVYVSDVAQAIVNAAKDPDTAGRIYQAVGPKRY 291
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
LSEL+DWFH +M+K + +GY RYD+R+DP LK+ + L PG P+G L +RVER
Sbjct: 292 QLSELVDWFHRLMRKDQKGWGYQRYDMRWDPTFKLKVKLTNLICPGAPIGGLHLDRVER 350
>gi|195378672|ref|XP_002048107.1| GJ11526 [Drosophila virilis]
gi|194155265|gb|EDW70449.1| GJ11526 [Drosophila virilis]
Length = 417
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/299 (59%), Positives = 231/299 (77%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK G+Q+I+PYRG+ D L++CGDL
Sbjct: 52 MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDANRLKVCGDL 111
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF YH + IR+A+K+SNVVINL+GR++ TKNF D NV ARLA + ++ G
Sbjct: 112 GQVLFHFYHLEDPRSIREAVKHSNVVINLVGRDYETKNFKFKDVNVNGAARLASICRDAG 171
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+SALNA+ NP +YISGGSQ+ ++KY+GE V FP ATI RP+D+YGS D+F
Sbjct: 172 VERFIHLSALNAEANPKAHYISGGSQWLKSKYEGELMVRDAFPNATIIRPADIYGSEDRF 231
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ GE T+KQPV+V DVA AIV A KDPD AG+IYQAVGPKRY
Sbjct: 232 LRYYAHIWRRQFRSMPLWHSGERTVKQPVFVSDVAQAIVNAAKDPDTAGRIYQAVGPKRY 291
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
LSEL+DWFH +M+K + +GY RYD+R+DP LK+ + L PG P+G L +RVER
Sbjct: 292 QLSELVDWFHRLMRKDQKRWGYQRYDMRWDPTFKLKVKLTNLICPGAPIGGLHLDRVER 350
>gi|170059692|ref|XP_001865472.1| NADH-ubiquinone oxidoreductase 39 kda subunit [Culex
quinquefasciatus]
gi|167878361|gb|EDS41744.1| NADH-ubiquinone oxidoreductase 39 kda subunit [Culex
quinquefasciatus]
Length = 401
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/299 (60%), Positives = 226/299 (75%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LK+GTGGRSSFNGVVATVFGA+G++G Y+CNKLGK GSQ+IIPYR + Y+ L+LCGDL
Sbjct: 45 LKRGTGGRSSFNGVVATVFGATGFLGRYVCNKLGKIGSQVIIPYRADHYEAMRLKLCGDL 104
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF PYH +++ I KA+KYSNVVINL+GR++ TKNF D +VE RLAR++K+ G
Sbjct: 105 GQVLFHPYHLCDEESIYKAVKYSNVVINLVGRDWETKNFAFQDVHVEGARRLARIAKQAG 164
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIHIS+LNA P+P GS+F ++KY GEK V EFP+A +FRPSD+YG D+F
Sbjct: 165 VEKFIHISSLNATPHPEPILTKEGSKFLKSKYAGEKAVREEFPDAIVFRPSDIYGQEDRF 224
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ GE TIKQPVY GDVA IV A KD D+ G+ YQAVGP+RY
Sbjct: 225 LRYYAHIWRRQFRGMPLWYSGERTIKQPVYCGDVAQGIVNAIKDSDSQGQTYQAVGPRRY 284
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
LSEL+DWFH M+K + +GY RYDLRYDP +K+ + P +P+G L ERVER
Sbjct: 285 KLSELVDWFHREMRKDKEWWGYQRYDLRYDPTFMIKVKLTEFICPSFPVGDLHTERVER 343
>gi|195021200|ref|XP_001985349.1| GH14554 [Drosophila grimshawi]
gi|193898831|gb|EDV97697.1| GH14554 [Drosophila grimshawi]
Length = 417
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/299 (59%), Positives = 231/299 (77%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK G+Q+I+PYRG+ DV L++CGDL
Sbjct: 52 MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDESDVIRLKVCGDL 111
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF Y+ + IR A+K+SNVVINL+GR++ TKNF D NV ARLA + ++ G
Sbjct: 112 GQVLFHFYNLEDPRSIRDAVKHSNVVINLVGRDYETKNFKFKDVNVNGAARLASICRDSG 171
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+SALNA+ NP + ISGGSQ+ ++KY+GE +V FP ATI RP+D+YGS D+F
Sbjct: 172 VERFIHLSALNAEANPKAHCISGGSQWLKSKYEGELQVRDAFPNATIIRPADIYGSEDRF 231
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ GE T+KQPV+V DVA AIV A KDPD+AG+IYQAVGPKRY
Sbjct: 232 LRYYAHIWRRQFRSMPLWHNGELTVKQPVFVSDVAQAIVNAAKDPDSAGRIYQAVGPKRY 291
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
LSEL+DWFH +M+K + +GY RYD+R+DP LK + L PG P+G L +R+ER
Sbjct: 292 QLSELVDWFHRLMRKDQKRWGYQRYDMRWDPTFKLKARLTSLICPGAPVGGLHLDRIER 350
>gi|195480057|ref|XP_002086632.1| GE23238 [Drosophila yakuba]
gi|194186422|gb|EDX00034.1| GE23238 [Drosophila yakuba]
Length = 416
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/299 (58%), Positives = 231/299 (77%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK GSQ+I+PYRG+ DV L++ GDL
Sbjct: 51 MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGSQMILPYRGDDSDVIRLKVTGDL 110
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF Y+ + IR+A+K+SNVVINL+GR+F TKNF D +V R+AR+++E G
Sbjct: 111 GQVLFHFYNLEDPASIREAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAG 170
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+S+LN + NP Y+ GGS++ ++KY+GE V FP ATI RP+D+YGS D+F
Sbjct: 171 VERFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRF 230
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ KGE+T+KQPVYV DVA AI+ A KDPD+AG++YQAVGPKRY
Sbjct: 231 LRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRVYQAVGPKRY 290
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
LSEL+DWFH +M+K + +GY RYD+R+DP LK +N PG P+G L P R+ER
Sbjct: 291 QLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPARIER 349
>gi|312380419|gb|EFR26417.1| hypothetical protein AND_07551 [Anopheles darlingi]
Length = 421
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 172/299 (57%), Positives = 228/299 (76%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFG++G++G Y+CNKLGK GSQ+IIPYR + Y+ L+L GDL
Sbjct: 65 IKRGTGGRSSFNGIVATVFGSTGFLGRYVCNKLGKIGSQVIIPYRADHYEALRLKLVGDL 124
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF PY R++D IRKA+KYSNVVINL+GR++ TKNF+ D +VE RLAR+++E G
Sbjct: 125 GQVLFHPYDLRDEDAIRKAVKYSNVVINLVGRDWETKNFSFKDVHVEGARRLARIAREAG 184
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKF+H+S+LNA P P ++ GS+F ++KY GE V EFP+A +FRP+D+YG D+F
Sbjct: 185 VEKFVHVSSLNATPTPQPFFTKEGSKFLQSKYYGELAVREEFPDAIVFRPADIYGQEDRF 244
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ KGE TIKQPVY D+A I+ A KD D+ G+ YQAVGP+RY
Sbjct: 245 LRYYAHIWRRQFRAMPLWYKGERTIKQPVYCSDLAQGIINAIKDSDSQGQTYQAVGPRRY 304
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLK-LFINGLFPGYPMGHLTPERVER 303
LS L+DWFH +M+K E +GY+RYDLRYDP +K L + P +P+G + ER+ER
Sbjct: 305 KLSVLVDWFHQIMRKDEKWWGYFRYDLRYDPTFRIKALLTETISPSFPIGDVHTERIER 363
>gi|195348289|ref|XP_002040681.1| GM22299 [Drosophila sechellia]
gi|195495852|ref|XP_002095444.1| GE19689 [Drosophila yakuba]
gi|194122191|gb|EDW44234.1| GM22299 [Drosophila sechellia]
gi|194181545|gb|EDW95156.1| GE19689 [Drosophila yakuba]
Length = 416
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/299 (58%), Positives = 231/299 (77%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK GSQ+I+PYRG+ DV L++ GDL
Sbjct: 51 MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGSQMILPYRGDDSDVIRLKVTGDL 110
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF Y+ + IR+A+K+SNVVINL+GR+F TKNF D +V R+AR+++E G
Sbjct: 111 GQVLFHFYNLEDPASIREAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAG 170
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+S+LN + NP Y+ GGS++ ++KY+GE V FP ATI RP+D+YGS D+F
Sbjct: 171 VERFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRF 230
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ KGE+T+KQPVYV DVA AI+ A KDPD+AG++YQAVGPKRY
Sbjct: 231 LRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRVYQAVGPKRY 290
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
LSEL+DWFH +M+K + +GY RYD+R+DP LK +N PG P+G L P R+ER
Sbjct: 291 QLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPARIER 349
>gi|158298342|ref|XP_318516.3| AGAP010792-PA [Anopheles gambiae str. PEST]
gi|157014355|gb|EAA13714.3| AGAP010792-PA [Anopheles gambiae str. PEST]
Length = 385
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/299 (58%), Positives = 227/299 (75%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFG++G++G Y+CNKLGK GSQ+IIPYR + Y+ L+L GDL
Sbjct: 29 MKRGTGGRSSFNGIVATVFGSTGFLGRYVCNKLGKIGSQVIIPYRADHYEAMRLKLVGDL 88
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF PY R+++ I KA+KYSNVVINL+GR++ TKNFT D +V+ RLAR+++E G
Sbjct: 89 GQVLFHPYDLRDEEAIYKAVKYSNVVINLVGRDWETKNFTFKDVHVDGARRLARIAREAG 148
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE F+H+S+LNA PNP ++ GS+F +KY GE V EFP+A +FRPSD+YG D+F
Sbjct: 149 VETFVHVSSLNATPNPQPFFTKEGSKFLASKYYGELAVREEFPDAIVFRPSDIYGQEDRF 208
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ KGE TIKQPVY D+A IV A KD D+ G+ YQAVGP+RY
Sbjct: 209 LRYYAHIWRRQFRAMPLWYKGERTIKQPVYCSDLAQGIVNAIKDSDSQGQTYQAVGPRRY 268
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
LS L+DWFH VM+K E +GYYRYDLRYDP +K+ + L P +P+G + ERVER
Sbjct: 269 KLSALVDWFHQVMRKDEKWWGYYRYDLRYDPTFRMKVLLTELVSPSFPIGDVHTERVER 327
>gi|194874988|ref|XP_001973503.1| GG16121 [Drosophila erecta]
gi|190655286|gb|EDV52529.1| GG16121 [Drosophila erecta]
Length = 416
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/299 (57%), Positives = 231/299 (77%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK G+Q+I+PYRG+ DV L++ GDL
Sbjct: 51 MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDL 110
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF Y+ + IR+A+K+SNVVINL+GR+F TKNF D +V R+AR+++E G
Sbjct: 111 GQVLFHFYNLEDPASIREAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAG 170
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+S+LN + NP Y+ GGS++ ++KY+GE V FP ATI RP+D+YGS D+F
Sbjct: 171 VERFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRF 230
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ KGE+T+KQPVYV DVA AI+ A KDPD+AG++YQAVGPKRY
Sbjct: 231 LRYYAHVWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRVYQAVGPKRY 290
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
LSEL+DWFH +M+K + +GY RYD+R+DP LK +N PG P+G L P R+ER
Sbjct: 291 QLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPARIER 349
>gi|91080689|ref|XP_975235.1| PREDICTED: similar to NADH-ubiquinone oxidoreductase 39 kda subunit
[Tribolium castaneum]
gi|270006426|gb|EFA02874.1| hypothetical protein TcasGA2_TC007967 [Tribolium castaneum]
Length = 398
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/299 (58%), Positives = 235/299 (78%), Gaps = 2/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LK+GTGGRSSFNG+VATVFG G++G Y+CN+LGK GSQ+I+PYRG+ YDV L++CGDL
Sbjct: 41 LKRGTGGRSSFNGIVATVFGCGGFIGRYVCNRLGKNGSQLILPYRGDPYDVMRLKVCGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQV F P+ R+++ I K +YSNVVINLIGR++ T+NF+ D +V+ LA+++K G
Sbjct: 101 GQVYFHPFDLRDEESIEKVCRYSNVVINLIGRDWETRNFSFDDVHVKGARLLAKVAKRSG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+SALNA+ P + GGS+F +K++GE+ VL EFPEATIFRP+D+YG D+F
Sbjct: 161 VERFIHLSALNAEETPEAVILKGGSKFLASKWRGEQAVLEEFPEATIFRPADVYGQEDRF 220
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYYGH+WR L ++KKGEETIKQPV+V D+A+ I+AA KD D AGK+YQAVGPKRY
Sbjct: 221 LRYYGHIWRRQATYLPLWKKGEETIKQPVFVSDLASGIMAALKDSDTAGKVYQAVGPKRY 280
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFIN-GLFPGYPMGHLTPERVER 303
LSEL+DWF VM+K + D+GY+RYD+RYDP+ +++ + L G+P+G+L ERVER
Sbjct: 281 YLSELVDWFFRVMRK-DKDWGYWRYDMRYDPIFQIRVTLTEKLRVGFPIGNLHWERVER 338
>gi|195172153|ref|XP_002026863.1| GL12793 [Drosophila persimilis]
gi|194112631|gb|EDW34674.1| GL12793 [Drosophila persimilis]
Length = 413
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/299 (57%), Positives = 228/299 (76%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK G+Q+I+PYRG +V L++ GDL
Sbjct: 48 MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGEDSEVIRLKVTGDL 107
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF Y+ + IR A+K+SNVVINL+GR+F TKNF D NV R+AR+ +E+G
Sbjct: 108 GQVLFHFYNLEDAASIRNAVKHSNVVINLVGRDFETKNFKFKDVNVTGAERIARICREVG 167
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+S+LN + NP Y+ GGS++ R+KY+GE V FP ATI RP+D+YGS D+F
Sbjct: 168 VERFIHLSSLNVEANPKPLYVKGGSEWLRSKYEGELRVRDAFPNATIIRPADIYGSEDRF 227
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ KGE T+KQPVYV DVA AI+ A K+PD+AG+IYQAVGPKRY
Sbjct: 228 LRYYAHIWRRQFRSMPLWHKGERTVKQPVYVTDVAQAIINAAKEPDSAGRIYQAVGPKRY 287
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
LSEL+DWFH +M+K + +GY RYD+R+DP +K + PG P+G L PER+ER
Sbjct: 288 QLSELVDWFHRLMRKDQKRWGYQRYDMRWDPTFLMKAKLTSFICPGAPIGGLHPERIER 346
>gi|24667554|ref|NP_649234.1| CG6020, isoform A [Drosophila melanogaster]
gi|442633716|ref|NP_001262116.1| CG6020, isoform B [Drosophila melanogaster]
gi|7296323|gb|AAF51613.1| CG6020, isoform A [Drosophila melanogaster]
gi|440216083|gb|AGB94809.1| CG6020, isoform B [Drosophila melanogaster]
Length = 416
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/299 (57%), Positives = 229/299 (76%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK G+Q+I+PYRG+ DV L++ GDL
Sbjct: 51 MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDL 110
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF Y+ + IR A+K+SNVVINL+GR+F TKNF D +V R+AR+++E G
Sbjct: 111 GQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAG 170
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+ IH+S+LN + NP Y+ GGS++ ++KY+GE V FP ATI RP+D+YGS D+F
Sbjct: 171 VERLIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRF 230
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ KGE+T+KQPVYV DVA AI+ A KDPD+AG+IYQAVGPKRY
Sbjct: 231 LRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIYQAVGPKRY 290
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
LSEL+DWFH +M+K + +GY RYD+R+DP LK +N PG P+G L P R+ER
Sbjct: 291 QLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPARIER 349
>gi|194749729|ref|XP_001957289.1| GF10349 [Drosophila ananassae]
gi|190624571|gb|EDV40095.1| GF10349 [Drosophila ananassae]
Length = 416
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/299 (57%), Positives = 230/299 (76%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK G+Q+I+PYRG+ DV L++ GDL
Sbjct: 51 MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDL 110
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF Y+ + IR+A+K+SNVVINL+GR+F TKNF D + R+AR+S+E G
Sbjct: 111 GQVLFHFYNLEDVPSIREAVKHSNVVINLVGRDFETKNFKFRDVHSNGAERIARISREAG 170
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++FIH+S+LN + NP Y+ GGS++ ++KY+GE V FP ATI RP+D+YGS D+F
Sbjct: 171 VDRFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRF 230
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ KGE+T+KQPV+V DVA AIV A KDPD+AG+IYQAVGPKRY
Sbjct: 231 LRYYAHIWRRQFRSMPLWHKGEKTVKQPVFVSDVAQAIVNAAKDPDSAGRIYQAVGPKRY 290
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKL-FINGLFPGYPMGHLTPERVER 303
LSEL+DWFH +M+K + +GY RYD+R+DP LK N + PG P+G L P R+ER
Sbjct: 291 QLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLTNWICPGTPVGGLHPARIER 349
>gi|125977914|ref|XP_001352990.1| GA19302 [Drosophila pseudoobscura pseudoobscura]
gi|54641741|gb|EAL30491.1| GA19302 [Drosophila pseudoobscura pseudoobscura]
Length = 413
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/299 (57%), Positives = 228/299 (76%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFGA+G++G Y+CNKLGK G+Q+I+PYRG +V L++ GDL
Sbjct: 48 MKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGEDSEVIRLKVTGDL 107
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF Y+ + IR A+K+SNVVINL+GR+F TKNF D NV R+AR+ +E+G
Sbjct: 108 GQVLFHFYNLEDAASIRNAVKHSNVVINLVGRDFETKNFKFKDVNVTGAERIARICREVG 167
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+S+LN + NP Y+ GGS++ R+KY+GE V FP ATI RP+D+YGS D+F
Sbjct: 168 VERFIHLSSLNVEANPKPLYVKGGSEWLRSKYEGELRVRDAFPNATIIRPADIYGSEDRF 227
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ KGE T+KQPV+V DVA AI+ A K+PD+AG+IYQAVGPKRY
Sbjct: 228 LRYYAHIWRRQFRSMPLWHKGELTVKQPVFVTDVAQAIINAAKEPDSAGRIYQAVGPKRY 287
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
LSEL+DWFH +M+K + +GY RYD+R+DP +K + PG P+G L PER+ER
Sbjct: 288 QLSELVDWFHRLMRKDQKRWGYQRYDMRWDPTFLMKAKLTSFICPGAPIGGLHPERIER 346
>gi|195442552|ref|XP_002069018.1| GK12296 [Drosophila willistoni]
gi|194165103|gb|EDW80004.1| GK12296 [Drosophila willistoni]
Length = 413
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/299 (57%), Positives = 229/299 (76%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFGASG++G Y+CNKLGK G+Q+I+PYRG+ ++ L++CGDL
Sbjct: 48 MKRGTGGRSSFNGIVATVFGASGFVGRYVCNKLGKSGTQMILPYRGDDSEIIRLKVCGDL 107
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF Y+ + IR+A+K+SNVVINL+GR++ TKNF D +V ARLA + ++ G
Sbjct: 108 GQVLFHFYNLEDPKSIREAVKHSNVVINLVGRDYETKNFKFKDVHVNGAARLASICRDAG 167
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+S+LN + NP I GGSQ+ ++KY+GE V FP ATI RPSD+YGS D+F
Sbjct: 168 VERFIHLSSLNVEANPEPLIIKGGSQWLKSKYEGELRVRDAFPNATIIRPSDIYGSEDRF 227
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR FR + ++ GE+T+KQPV+V DVA AI+ A KDPD+AG+IYQAVGPKRY
Sbjct: 228 LRYYAHIWRRQFRSMPLWYNGEKTVKQPVFVSDVAQAIINAAKDPDSAGRIYQAVGPKRY 287
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKL-FINGLFPGYPMGHLTPERVER 303
LSEL+DWFH +M+K + +GY RYD+R+DP LK F + PG P+ L P+R+ER
Sbjct: 288 QLSELVDWFHRLMRKDQKRWGYQRYDMRWDPTFLLKAKFTQWICPGAPVAGLHPDRIER 346
>gi|157123088|ref|XP_001660001.1| NADH-ubiquinone oxidoreductase 39 kda subunit [Aedes aegypti]
gi|108874494|gb|EAT38719.1| AAEL009414-PA [Aedes aegypti]
Length = 401
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/300 (58%), Positives = 224/300 (74%), Gaps = 1/300 (0%)
Query: 5 HLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD 64
+K+GTGGRSSFNGVVATVFG++G++G Y+CNKLGK GSQ+IIPYR + Y+ L+L GD
Sbjct: 44 EMKRGTGGRSSFNGVVATVFGSTGFLGRYVCNKLGKTGSQVIIPYRADHYEALRLKLVGD 103
Query: 65 LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM 124
LGQVLF PYH +++ I KA+K+SNVVINL+GR++ TKNFT D +V+ RLAR+SK+
Sbjct: 104 LGQVLFTPYHLCDEESIYKAVKHSNVVINLVGRDWETKNFTFDDVHVQGARRLARISKQA 163
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
GVEKFIH+S+LN PNP GS+F ++KY GE V EFPEA IFRP+D+YG D+
Sbjct: 164 GVEKFIHLSSLNCTPNPTPILTKEGSKFLKSKYYGELAVREEFPEAVIFRPADIYGQEDR 223
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
FLRYY H+WR FR + ++ KGE T+KQPV+ DVA IV A KD D+ ++YQAVGP+R
Sbjct: 224 FLRYYAHLWRRQFRGMPLWYKGERTVKQPVHCSDVAQGIVNAIKDSDSQNQVYQAVGPRR 283
Query: 245 YLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
Y LSEL+DWFH M+K +GY+RYDLR+DP LK+ + P +P+G L ERVER
Sbjct: 284 YKLSELVDWFHREMRKDADWWGYWRYDLRFDPTFMLKVKLTEFISPSFPVGDLHTERVER 343
>gi|289742341|gb|ADD19918.1| NADH-ubiquinone oxidoreductase NDUFA9/39kDa subunit [Glossina
morsitans morsitans]
Length = 412
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/298 (58%), Positives = 223/298 (74%), Gaps = 1/298 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSFNG+VATVFG SG++G Y+CNKLGK G+Q+++PYRG+ DV L++CGDL
Sbjct: 47 MKRGTGGRSSFNGIVATVFGCSGFVGRYVCNKLGKSGTQMVLPYRGDESDVMRLKVCGDL 106
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF Y R++ IR A KYSNVVINL+GRE+ TKNF D +++ R+AR+ +E+G
Sbjct: 107 GQVLFHFYDLRDEKAIRTACKYSNVVINLVGREYETKNFKFKDVHIDGARRIARICREVG 166
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+ IH+SALN DP P + ISGGS+F R+K GE+ V EFP+ATI RP+D+YGS D+F
Sbjct: 167 VERLIHVSALNVDPEPEGHIISGGSKFLRSKRLGEQAVFEEFPKATIIRPADIYGSEDRF 226
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
LRYY H+WR R ++ GE T+KQPVYV DVA IV + KDPD AGKIYQAVGPKRY
Sbjct: 227 LRYYAHVWRRQIRGTPLWFSGERTVKQPVYVSDVAQGIVNSIKDPDTAGKIYQAVGPKRY 286
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKL-FINGLFPGYPMGHLTPERVE 302
LSEL+DWF+ +M+K E +GY RYD+R+DP K + P PMG+L ER+E
Sbjct: 287 KLSELVDWFNRLMRKDEKWWGYLRYDMRFDPTFIFKTKLTEWICPNQPMGNLHMERLE 344
>gi|288856263|ref|NP_001165787.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
[Nasonia vitripennis]
Length = 407
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 172/299 (57%), Positives = 224/299 (74%), Gaps = 1/299 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L+KGTGGRSSFNG+V TVFG SG+MG Y+CN+LGK G+Q+I+PYRG+FY V L+LCGDL
Sbjct: 45 LRKGTGGRSSFNGIVCTVFGNSGFMGRYVCNRLGKIGTQLILPYRGDFYQVAPLKLCGDL 104
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF P+ R+++ I K IKYSNVVINLIG ++ TKNFT D +V+ ARLAR+ K+ G
Sbjct: 105 GQVLFHPFDLRDEESILKCIKYSNVVINLIGCDWETKNFTYDDCHVQGAARLARICKQNG 164
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+S LNA PNP + GS+F+++K++GE V +EFP+ATI RP+D YG+ D+F
Sbjct: 165 VERFIHVSCLNASPNPEPILLPEGSKFFKSKWEGESAVRQEFPDATIIRPADTYGTEDRF 224
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L YY H WR FR + +YKKGE T KQPV+VGDVAA IVAA KD +AG+ YQ VG KRY
Sbjct: 225 LAYYAHRWRQHFRGIPMYKKGEHTEKQPVWVGDVAAGIVAAIKDHQSAGRTYQFVGTKRY 284
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFING-LFPGYPMGHLTPERVER 303
LS+L+DWF ++++ YGY R DL P+ LK+ + L P YP+G+L E +E+
Sbjct: 285 KLSDLMDWFQEMLRRESTIYGYRRLDLDRMPLFKLKVTLTEFLSPAYPIGYLHWEGLEK 343
>gi|307180316|gb|EFN68349.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Camponotus floridanus]
Length = 403
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 174/300 (58%), Positives = 217/300 (72%), Gaps = 3/300 (1%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LK+GTGGRSSFNG+V TVFGA+G++G Y+CN+LGK G+Q+I+PY+G+ Y L+LCGDL
Sbjct: 45 LKRGTGGRSSFNGIVCTVFGATGFVGRYVCNRLGKIGTQLILPYKGDMYKCLPLKLCGDL 104
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF P+H R++D IRK IKYSNVVINLIGRE+ T+NFT + +V+ RLARL KE
Sbjct: 105 GQVLFHPFHLRDEDSIRKCIKYSNVVINLIGREWETRNFTYHEVHVDGARRLARLCKEAN 164
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE FIH+SALN D + TY + GS+F TK +GE V EFPEATI RPS+++G D+F
Sbjct: 165 VEHFIHVSALNVDSD-KTYVLKDGSRFLHTKLEGEHAVREEFPEATIIRPSNIWGQEDRF 223
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-DAAGKIYQAVGPKR 244
LR Y + RH FR + +++ GE T KQPV V DVA I A KDP + AGKIYQ VGPKR
Sbjct: 224 LRVYAGIMRHHFRTIPIWENGEATEKQPVAVYDVAGGITAIAKDPKNTAGKIYQFVGPKR 283
Query: 245 YLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFP-GYPMGHLTPERVER 303
Y SELLDWFH + DYGY R DL+Y P+ LKL +N LF YP+G + E +ER
Sbjct: 284 YKFSELLDWFHRIRMHNPADYGYRRIDLKYAPLFKLKLTLNELFSTAYPLGFVQWELLER 343
>gi|332016616|gb|EGI57488.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Acromyrmex echinatior]
Length = 414
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 172/300 (57%), Positives = 220/300 (73%), Gaps = 2/300 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LK+GTGGRSSFNG+V TVFGA G++G Y+CN+LGK G+Q+IIPYRG+ YD L+LCGDL
Sbjct: 55 LKRGTGGRSSFNGIVCTVFGAGGFVGRYVCNRLGKIGTQLIIPYRGDMYDCFRLKLCGDL 114
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF P+H R+D+ IRK IKYSNVVINLIGR++ TKNFT + +VE RLARL KE
Sbjct: 115 GQVLFHPFHLRDDESIRKCIKYSNVVINLIGRDWETKNFTFHEVHVEGARRLARLCKEAN 174
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V+ FIH+SALN ++ + GGS+F RTK++GE V EFPE TI RP+D++G D+F
Sbjct: 175 VKHFIHVSALNVGDEVESHILKGGSEFLRTKWEGECAVQEEFPEVTIIRPADIWGQEDRF 234
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-DAAGKIYQAVGPKR 244
L +Y + RH FR + +++KGE+T KQPV V DV+A I A +DP + AGK YQ VGPKR
Sbjct: 235 LSFYSGILRHHFRSVPLWEKGEKTEKQPVAVYDVSAGITAIARDPRNTAGKTYQFVGPKR 294
Query: 245 YLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFING-LFPGYPMGHLTPERVER 303
Y LSELLDWFH + + + GY R L+Y P+ LK+ +N L P YP+G+L ER ER
Sbjct: 295 YKLSELLDWFHRIRIRDPVEDGYKRMHLKYAPLFQLKITLNEYLSPAYPLGNLQWERFER 354
>gi|332372989|gb|AEE61636.1| unknown [Dendroctonus ponderosae]
Length = 399
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 162/298 (54%), Positives = 225/298 (75%), Gaps = 1/298 (0%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
K+G+GGRSSFNG+VATVFG++G++ Y+CNKLGK G+Q+I+PYRG+ YD L++ GDLG
Sbjct: 43 KRGSGGRSSFNGIVATVFGSTGFISRYVCNKLGKIGTQLILPYRGDNYDPMRLKVVGDLG 102
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV 126
QV F PY+ +++D IRK ++YSNVVINL+GR++ T+NF +VE RLAR++KE GV
Sbjct: 103 QVYFHPYNLKDEDSIRKVVQYSNVVINLVGRDWETRNFNFNQVHVEGARRLARIAKEAGV 162
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
E+FIH S+LNA +P + GS+F ++K GE V EFPEATIFRP+D+YG D+FL
Sbjct: 163 ERFIHFSSLNASEDPEGVILKNGSKFLKSKALGEIAVWEEFPEATIFRPADVYGQEDRFL 222
Query: 187 RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
RYY H WR + + ++ KGE+T+KQPV+V DVA+ +VAA +DPD+AGKI+QAVGPKRYL
Sbjct: 223 RYYLHNWRRQLQNMPLWDKGEKTVKQPVHVSDVASGVVAAIRDPDSAGKIFQAVGPKRYL 282
Query: 247 LSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKL-FINGLFPGYPMGHLTPERVER 303
LSEL+D+ + V + ++GY RYD+++DP LK+ L +P+GHL E++ER
Sbjct: 283 LSELVDYIYRVTHRDRDNWGYRRYDMKWDPFFQLKVTMTQKLSYSWPLGHLHWEKLER 340
>gi|321473852|gb|EFX84818.1| hypothetical protein DAPPUDRAFT_300729 [Daphnia pulex]
Length = 395
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/298 (54%), Positives = 224/298 (75%), Gaps = 1/298 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++GTGGRSSFNGVVATVFGA+G++GS +CNKLG G+Q+++PYRG+FYDV L++CGDL
Sbjct: 41 FRRGTGGRSSFNGVVATVFGANGHLGSVVCNKLGNTGTQLVLPYRGDFYDVAPLKMCGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQV F PY+ ++++ IRKA+K+SN+VIN++GRE+ T+NF+ D V+ P +AR++KE G
Sbjct: 101 GQVYFTPYNLKDENSIRKALKHSNLVINVVGREWETRNFSFEDIYVKGPRTIARIAKECG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+ IH+SALNA P + GS+F K++GE V EFPEA IFRPSD++GS D+F
Sbjct: 161 VERMIHVSALNATEKPEPLMLKEGSKFLSAKWRGELAVREEFPEAVIFRPSDIFGSEDRF 220
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
+ YY WR + ++KKGE TIKQPV VGDVA I+ A ++ D G+IYQA+GPKRY
Sbjct: 221 VTYYAAFWRRQGAGMPLWKKGEHTIKQPVCVGDVAQGILNAARNIDTNGQIYQAIGPKRY 280
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVER 303
L EL+D+F VM+K + ++GYYRYDLRY P+ LK+ + PG+P+ +L E++ER
Sbjct: 281 QLGELVDYFFRVMRK-DKEWGYYRYDLRYAPLFWLKVNLTAKLPGWPIANLGWEKLER 337
>gi|357627575|gb|EHJ77228.1| hypothetical protein KGM_02785 [Danaus plexippus]
Length = 395
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 164/297 (55%), Positives = 220/297 (74%), Gaps = 1/297 (0%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
K+GTGGRSSFNGVVATVFG +G++G Y+CNKLGK G+Q+I+PYRG+FYD L++CGDLG
Sbjct: 41 KRGTGGRSSFNGVVATVFGCTGFVGRYVCNKLGKIGTQMILPYRGDFYDAARLKVCGDLG 100
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV 126
QVLF PY R+++ IR+A+KYSNVVINL+GR++ TKNF D +V+ P LAR+S+EMGV
Sbjct: 101 QVLFTPYDLRDEESIRRAVKYSNVVINLVGRDYETKNFKYKDVHVDGPRLLARISREMGV 160
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
E+FIH+S LNA+PNP + S F +KY GE V EFP ATI R SD+YGS D+F+
Sbjct: 161 ERFIHLSYLNAEPNPKPLVMKSPSMFKVSKYHGELAVREEFPTATIIRASDIYGSEDRFI 220
Query: 187 RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
R +WR R + +Y+ G +T+KQPVYV DVA IV A +DPD ++YQAVGPKRYL
Sbjct: 221 RSIASIWRRHNRYMPLYRHGMDTVKQPVYVSDVAQGIVNAARDPDTRCQVYQAVGPKRYL 280
Query: 247 LSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVER 303
L +L+ WF +M+K E +G+ +D++YDPV+ +K+ + + P YP G L E +E+
Sbjct: 281 LHDLVWWFFRLMRKDE-KWGFKTFDMKYDPVLSIKVAMANMSPAYPFGSLHWEGLEK 336
>gi|322790205|gb|EFZ15204.1| hypothetical protein SINV_03405 [Solenopsis invicta]
Length = 410
Score = 346 bits (888), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 167/300 (55%), Positives = 220/300 (73%), Gaps = 2/300 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LKKGTGGRSSFNG+V T+FG++G++G YLCN+LGK G+Q+++PYRG+ Y+ L+LCGDL
Sbjct: 51 LKKGTGGRSSFNGIVCTLFGSTGFVGRYLCNRLGKIGTQLVLPYRGDMYNCLPLKLCGDL 110
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF P+H R+D+ IRK IKYSNVVINLIGR++ T+NFT + NVE R+ARL KE
Sbjct: 111 GQVLFHPFHLRDDESIRKCIKYSNVVINLIGRDWETRNFTFHEVNVEGARRIARLCKEAN 170
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
+E FIH+SALN ++ + GSQ+ RTK++GE V EFPEATI RPSD++G D+F
Sbjct: 171 IEHFIHVSALNVGDELESHILKDGSQYLRTKWEGECAVREEFPEATIIRPSDIWGQEDRF 230
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD-AAGKIYQAVGPKR 244
LR Y + RH FR + +++KGE+T KQPV V DVA I A KDP AGK YQ VGP R
Sbjct: 231 LRLYCGIMRHHFRTVPMWEKGEKTEKQPVAVYDVAKGITAIAKDPKHTAGKTYQFVGPNR 290
Query: 245 YLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFP-GYPMGHLTPERVER 303
Y LSEL+DWFH + + + GY R+DL+Y P+ LK+ +N L +P+G+L+ E +ER
Sbjct: 291 YKLSELIDWFHRIRIRDPVEDGYRRFDLKYAPLFKLKVSLNELISTAHPLGYLSWEHLER 350
>gi|328704640|ref|XP_001948072.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Acyrthosiphon pisum]
Length = 411
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 222/301 (73%), Gaps = 2/301 (0%)
Query: 5 HLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD 64
LK+GTGGRSSFNGVVATVFGA+G +G L NKLGK G+Q+IIPYRG+ Y +R+L+L GD
Sbjct: 45 QLKRGTGGRSSFNGVVATVFGATGLLGGNLINKLGKIGTQLIIPYRGDAYFIRELKLAGD 104
Query: 65 LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM 124
LGQVLFQPYH ++++ IRKA+KYSNVVINL+GR++ TKNF D +VE R+AR+S+EM
Sbjct: 105 LGQVLFQPYHLQDEESIRKAVKYSNVVINLVGRDWETKNFKFNDVHVEGARRIARISREM 164
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
GVE+ IH+SALN DP P Y+ GS F +K GE+ V EFP+ATIFRPSD+YG GD+
Sbjct: 165 GVERLIHVSALNVDPLPAPIYLKKGSGFLASKKVGEQAVCDEFPDATIFRPSDIYGQGDR 224
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
FL Y H WR +++ ++KKGE+T+KQPV V DVA IV A D GKIYQAVGP
Sbjct: 225 FLLMYSHAWRRSHQQVVLWKKGEQTVKQPVAVSDVAYGIVNAMLDRSTKGKIYQAVGPTP 284
Query: 245 YLLSELLDW-FHVVMKKGEPDYGYYRYDLRYDPVMPLKLFI-NGLFPGYPMGHLTPERVE 302
Y+LS+L+DW F V+ + + ++ Y R + +P +K+++ + L P +P G++T ER E
Sbjct: 285 YMLSDLIDWMFAVLRRNNQFNFDYKRTGILENPQYLIKMWLTDKLCPSWPPGYVTSERFE 344
Query: 303 R 303
R
Sbjct: 345 R 345
>gi|389609269|dbj|BAM18246.1| NADH-ubiquinone oxidoreductase 39 kda subunit [Papilio xuthus]
Length = 396
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/299 (54%), Positives = 217/299 (72%), Gaps = 4/299 (1%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
K+GTGGRSSFNG+VATVFG +G++G Y+CNKLGK G+Q+I+PYR +FYD L++ GDLG
Sbjct: 43 KRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQMILPYRSDFYDANRLKVAGDLG 102
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV 126
QVLF P+ R+++ I KA+KYSNVVINL+GR++ TKNF+ D +V+ P R+AR+ +EMGV
Sbjct: 103 QVLFTPFDIRDEESIAKAVKYSNVVINLVGRDYETKNFSYTDVHVDGPRRIARICREMGV 162
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
E+FIH+S LNA+ +P + S + +KY GE V EFP ATIFR SD+YGS D+F+
Sbjct: 163 ERFIHLSYLNAERHPQPLVLRKPSMYKISKYLGECAVREEFPTATIFRASDIYGSEDRFI 222
Query: 187 RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
R WR + VYK G ETIKQPVYV DVA IV A +DPD ++YQA+GPKRYL
Sbjct: 223 RSLATGWRSHGNLVPVYKNGMETIKQPVYVSDVAQGIVNAARDPDTRCQVYQAIGPKRYL 282
Query: 247 LSELLDWFHVVMKKGEPDYGYYRYDLRYDPV-MPLKL-FINGLFPGYPMGHLTPERVER 303
L++L+DWF+ +M+K GY RYD++YDP+ L++ N L P YP G L E +E+
Sbjct: 283 LADLIDWFYKLMRKDRA--GYRRYDMKYDPIFFSLRVAAANMLSPAYPFGGLHWEGLEK 339
>gi|383859262|ref|XP_003705114.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Megachile rotundata]
Length = 401
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/280 (53%), Positives = 203/280 (72%), Gaps = 1/280 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LK+GTGGRSSF+GVV T+FG +G++G Y+CN+LGK G+Q+I+P+R + Y V L+LCGDL
Sbjct: 45 LKRGTGGRSSFSGVVCTIFGCNGFVGRYVCNRLGKIGTQLILPHRCDRYFVLPLKLCGDL 104
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF P+H R+++ I ++IKYSNVVINLIG T+NF + D NV+ RLARL+K+
Sbjct: 105 GQVLFHPFHLRDEESIMRSIKYSNVVINLIGASMNTRNFNLKDVNVDGARRLARLAKQCN 164
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+S LNA+ P + GS+ +TK+QGE V EFPEATI RPS +YG D F
Sbjct: 165 VERFIHVSCLNAEEKPKPLMLKNGSEILKTKWQGECAVKEEFPEATIVRPSIIYGQEDNF 224
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
+ +Y + WR + + +++ GE+T KQPVYVGDVAA I A +P+ AGK YQ VGPKRY
Sbjct: 225 ITHYMNPWRRNMKTVPLWEGGEKTEKQPVYVGDVAAGITAIATNPETAGKTYQFVGPKRY 284
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFIN 285
L L++WF+ + +G PDY Y D++Y+PV LK+ +N
Sbjct: 285 KLGTLINWFYNIASRGLPDY-YKIIDMKYNPVFNLKVDLN 323
>gi|28416365|gb|AAO42655.1| GM13757p [Drosophila melanogaster]
Length = 327
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/260 (55%), Positives = 193/260 (74%), Gaps = 1/260 (0%)
Query: 45 IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNF 104
+I+PYRG+ DV L++ GDLGQVLF Y+ + IR A+K+SNVVINL+GR+F TKNF
Sbjct: 1 MILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNF 60
Query: 105 TIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVL 164
D +V R+AR+++E GVE+FIH+S+LN + NP Y+ GGS++ ++KY+GE V
Sbjct: 61 KFKDVHVNGAERIARIAREAGVERFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVR 120
Query: 165 REFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224
FP ATI RP+D+YGS D+FLRYY H+WR FR + ++ KGE+T+KQPVYV DVA AI+
Sbjct: 121 DAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAII 180
Query: 225 AACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFI 284
A KDPD+AG+IYQAVGPKRY LSEL+DWFH +M+K + +GY RYD+R+DP LK +
Sbjct: 181 NAAKDPDSAGRIYQAVGPKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKL 240
Query: 285 NGLF-PGYPMGHLTPERVER 303
N PG P+G L P R+ER
Sbjct: 241 NSFICPGTPIGGLHPARIER 260
>gi|195591888|ref|XP_002085668.1| GD14892 [Drosophila simulans]
gi|194197677|gb|EDX11253.1| GD14892 [Drosophila simulans]
Length = 327
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 144/260 (55%), Positives = 194/260 (74%), Gaps = 1/260 (0%)
Query: 45 IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNF 104
+I+PYRG+ DV L++ GDLGQVLF Y+ + IR+A+K+SNVVINL+GR+F TKNF
Sbjct: 1 MILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIREAVKHSNVVINLVGRDFETKNF 60
Query: 105 TIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVL 164
D +V R+AR+++E GVE+FIH+S+LN + NP Y+ GGS++ ++KY+GE V
Sbjct: 61 KFKDVHVNGAERIARIAREAGVERFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVR 120
Query: 165 REFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224
FP ATI RP+D+YGS D+FLRYY H+WR FR + ++ KGE+T+KQPVYV DVA AI+
Sbjct: 121 DAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAII 180
Query: 225 AACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFI 284
A KDPD+AG++YQAVGPKRY LSEL+DWFH +M+K + +GY RYD+R+DP LK +
Sbjct: 181 NAAKDPDSAGRVYQAVGPKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKL 240
Query: 285 NGLF-PGYPMGHLTPERVER 303
N PG P+G L P R+ER
Sbjct: 241 NSFICPGTPIGGLHPVRIER 260
>gi|443731186|gb|ELU16423.1| hypothetical protein CAPTEDRAFT_138749, partial [Capitella teleta]
Length = 391
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 153/298 (51%), Positives = 210/298 (70%), Gaps = 9/298 (3%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
K+GTGGRSSF+G+VATVFG SG+MGS + +LGK GSQ+I+PYR + Y +R+LRLCG+LG
Sbjct: 31 KRGTGGRSSFSGIVATVFGNSGFMGSSMVTRLGKIGSQVILPYRCDPYVIRNLRLCGELG 90
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV 126
Q+ F P+ RN++++ K++KYSNVVINLIGR++ TKN+ D +VE P +LA L++++GV
Sbjct: 91 QINFVPFDLRNEEDLIKSMKYSNVVINLIGRDWETKNYNFNDVHVEGPRKLASLARKLGV 150
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
E+FI +S LNA PNP +S GS++ +TK+ GE V EFPEATI RPSDMYG D FL
Sbjct: 151 ERFIQVSHLNASPNPTPILLSKGSEYLKTKWAGEMAVKDEFPEATIIRPSDMYGIDDNFL 210
Query: 187 RYYGHMWRHVFR-KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
YY + WR + K+++++KGE+TIK PV V DV IV A +DP +AGK Y+ VGP Y
Sbjct: 211 FYYMNRWRRSGKNKMSLWRKGEQTIKMPVDVRDVTQGIVNAIQDPSSAGKTYECVGPHPY 270
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVER 303
LLSE++D+ +++ Y R D+ P KL + P P H+T ERVE+
Sbjct: 271 LLSEIIDYLFRIIRAP----SYKRTDI--SPTFLAKLEVVRRAPDLP--HMTWERVEK 320
>gi|225710584|gb|ACO11138.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Caligus rogercresseyi]
Length = 420
Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 143/285 (50%), Positives = 197/285 (69%), Gaps = 7/285 (2%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
K+G+G RSSF+G+VATVFGA+ +G+ +CN+LGK GSQI+IPYRG+ Y L++ GDLG
Sbjct: 42 KRGSGYRSSFSGMVATVFGATDLVGTVVCNRLGKIGSQIVIPYRGDMYGYLPLKMAGDLG 101
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV 126
QVLF P+H ++D+ I KA+KYS++VIN IGRE+ TKNF D N+ P RLARL+KE GV
Sbjct: 102 QVLFSPFHLKDDESILKAMKYSDIVINAIGREWETKNFKFEDVNIHGPERLARLAKEAGV 161
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
+F+HIS+LNA NP ++ GS++ +TK+QGE VL FP+ATIFR SD+YG D F+
Sbjct: 162 SRFVHISSLNARENPDGAFLPKGSRWLKTKWQGENAVLEAFPDATIFRASDIYGHNDSFI 221
Query: 187 RYYGHMWRHV---FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
+Y R R L ++KKGE TIK P++VGD+ + I+ A D G Y+A GP+
Sbjct: 222 GHYAATARLSNINLRTLPLWKKGEHTIKAPIHVGDLVSGIMEAVSDDSTKGVTYEAYGPE 281
Query: 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF 288
+ LS+++DW + + K ++GY R DLRYDP +F LF
Sbjct: 282 MHKLSDIVDWIYYYINKDPSNFGYRRTDLRYDP----SVFAKALF 322
>gi|427780593|gb|JAA55748.1| Putative nadh:ubiquinone oxidoreductase ndufa9/39kda subunit
[Rhipicephalus pulchellus]
Length = 393
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/298 (50%), Positives = 203/298 (68%), Gaps = 4/298 (1%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L +GTGGRSSF+GVV TVFGASG +G +L NKLGK G+Q+++P R N YD++ L+LCGDL
Sbjct: 37 LHRGTGGRSSFSGVVCTVFGASGCLGRFLVNKLGKIGTQLVLPARTNLYDMQRLKLCGDL 96
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVLF P++ +++ I KA+KYSNVVINLIG++ T NF + +V+ R+AR+++E G
Sbjct: 97 GQVLFTPFNLKDELSIAKAMKYSNVVINLIGKDTETSNFPFNEVHVKGAERIARIARESG 156
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V+K IH SALN NP GGS+F+ +K+ GE+ V FP A IFRP+DMY GD F
Sbjct: 157 VQKLIHFSALNVTENPKPIIKFGGSKFFASKWLGEQMVKEAFPGAIIFRPADMYSHGDHF 216
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L YY R + V+ KG+ IKQPVY G+VA +V A + G+IYQAVGP+RY
Sbjct: 217 LSYYVSNLRRNLTYVPVWNKGKGIIKQPVYTGNVAEGVVNAIFEEGNQGEIYQAVGPRRY 276
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVER 303
L EL+D+ VM++ + GY RYD+R+DP L++ F G+ HL+ ER+ER
Sbjct: 277 ELGELIDYMFRVMRR---EVGYIRYDMRFDPFFLLRVQFLETF-GFKYPHLSWERLER 330
>gi|225719766|gb|ACO15729.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Caligus clemensi]
Length = 421
Score = 293 bits (749), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 142/292 (48%), Positives = 201/292 (68%), Gaps = 6/292 (2%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
K+G G RSSF+G VA+VFGA+G +G+ +CN+LGK GSQI+IPYRG+ Y+ ++CGDLG
Sbjct: 44 KRGPGYRSSFSGTVASVFGATGLVGTVVCNRLGKIGSQIVIPYRGDHYNYLPFKMCGDLG 103
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV 126
QVLF PYH ++D+ I KA+KYS+VVIN +GRE+ TKNF D N+ P RLARL+KE GV
Sbjct: 104 QVLFTPYHLKDDESILKAMKYSDVVINAVGREWETKNFKYEDINIHGPQRLARLAKEAGV 163
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
++F+HIS++NA P I GGS++ +TK+QGE VL FP+ATIFR S++YG+ D F+
Sbjct: 164 QRFVHISSINAREKPDKAIIPGGSRWLKTKWQGENAVLEAFPDATIFRASEIYGNQDSFI 223
Query: 187 RYYGHMWRHV---FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
+Y R + L ++KKGE T+K P++VGD+ + I+AA D G ++A GP+
Sbjct: 224 CHYASEARMSSIQSKGLPLWKKGEHTVKAPIHVGDLVSGIMAALADDSTKGVTFEAYGPE 283
Query: 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGH 295
+ LS+++DW + + K E +GY R DLR+DP + K L P+G
Sbjct: 284 FHKLSDIVDWMYYYINKDEEYFGYRRTDLRFDPSIFAKAM---LLQALPLGQ 332
>gi|346468967|gb|AEO34328.1| hypothetical protein [Amblyomma maculatum]
Length = 404
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/304 (50%), Positives = 207/304 (68%), Gaps = 4/304 (1%)
Query: 1 MCRVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR 60
M LK+GTGGRSSFNGVV TVFGASG +G +L NKLGK G+Q+I+P R NFY ++ L+
Sbjct: 45 MDLASLKRGTGGRSSFNGVVCTVFGASGCLGRFLVNKLGKIGTQLILPSRTNFYYMQRLK 104
Query: 61 LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARL 120
LCGDLGQVL P+ +++ I KA+KYSNVVINLIG++ T N+ ++ +V+ R+AR+
Sbjct: 105 LCGDLGQVLLVPFELKDELSIAKAMKYSNVVINLIGKDTETSNYPFSEVHVKGAERIARI 164
Query: 121 SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYG 180
++E GV+K IH SALNA NP GGS+FY +K+ GE+ V FP A IFRP+DMY
Sbjct: 165 ARESGVQKLIHFSALNATENPKPIIKFGGSKFYASKWLGEQVVRDAFPGAIIFRPADMYS 224
Query: 181 SGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAV 240
D FLRYY R + + V+K+G +KQPVY DVA +V A + G+IYQAV
Sbjct: 225 HEDHFLRYYVTKLRRNWLFMPVWKRGNGIVKQPVYTADVAEGVVNAIFEEGNEGEIYQAV 284
Query: 241 GPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKL-FINGLFPGYPMGHLTPE 299
GP+RY L EL+D+ VM++ E + GY RYD+R DP +++ F+ + YP+ L+ E
Sbjct: 285 GPRRYELGELIDYMFRVMRR-EKEVGYIRYDMRLDPFFLMRVQFLQMIGLKYPI--LSWE 341
Query: 300 RVER 303
R+ER
Sbjct: 342 RLER 345
>gi|225714134|gb|ACO12913.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Lepeophtheirus salmonis]
gi|290462335|gb|ADD24215.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
[Lepeophtheirus salmonis]
Length = 419
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/292 (48%), Positives = 195/292 (66%), Gaps = 6/292 (2%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
K+G+G RSSF+G VATVFG++G +G + N+LGK GSQI+IPYRG Y+ L++CGDLG
Sbjct: 42 KRGSGYRSSFSGKVATVFGSTGLLGKVISNRLGKIGSQIVIPYRGEQYNYFPLKMCGDLG 101
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV 126
QVLF YH ++D+ I KA+KYS++VIN IGRE+ TKNF D NV P R+ARL+K+ GV
Sbjct: 102 QVLFSSYHLKDDESILKAMKYSDIVINAIGREWETKNFKFMDVNVHGPERIARLAKQAGV 161
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
++F+HIS++NA NP ++ GS++ +TK+QGE VL FPEATIFR +D+YG D F+
Sbjct: 162 KRFVHISSINARENPDRAFLPRGSRWLQTKWQGENAVLEAFPEATIFRAADIYGHQDSFI 221
Query: 187 RYYGHMWRHV---FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
+Y R FR L ++KKGE T+K PV+V D+ I+ A D G Y+A GP+
Sbjct: 222 NHYASRVRLSSVNFRALPLWKKGEHTLKAPVHVSDLTTGIMNAIDDESTKGVTYEAYGPE 281
Query: 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGH 295
Y LS+++DW + M K ++ Y R DLR+DP + K F P G
Sbjct: 282 IYKLSDIVDWMYYYMNKDAANWDYRRSDLRFDPTVFAKAL---FFQSMPFGQ 330
>gi|290561727|gb|ADD38261.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
[Lepeophtheirus salmonis]
Length = 419
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/292 (48%), Positives = 195/292 (66%), Gaps = 6/292 (2%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
K+G+G RSSF+G VATVFG++G +G + N+LGK GSQI+IPYRG Y+ L++CGDLG
Sbjct: 42 KRGSGYRSSFSGKVATVFGSTGLLGKVISNRLGKIGSQIVIPYRGEQYNYFPLKMCGDLG 101
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV 126
QVLF YH ++D+ I KA+KYS++VIN IGRE+ TKNF D NV P R+ARL+K+ GV
Sbjct: 102 QVLFSSYHLKDDESILKAMKYSDIVINAIGREWETKNFKFMDVNVHGPERIARLAKQAGV 161
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
++F+HIS++NA NP ++ GS++ +TK+QGE VL FPEATIFR +D+YG D F+
Sbjct: 162 KRFVHISSINARENPDRAFLPRGSRWLQTKWQGENAVLEAFPEATIFRAADIYGHQDSFI 221
Query: 187 RYYGHMWRHV---FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
+Y R FR L ++KKGE T+K PV+V D+ I+ A D G Y+A GP+
Sbjct: 222 NHYASRVRLSSVNFRALPLWKKGEHTLKAPVHVSDLTTGIMNAIDDESTKGVTYEAYGPE 281
Query: 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGH 295
Y LS+++DW + M K ++ Y R DLR+DP + K F P G
Sbjct: 282 IYKLSDIVDWMYYYMNKDAANWDYRRSDLRFDPTVFAKAL---FFQSMPFGQ 330
>gi|358333245|dbj|GAA31353.2| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Clonorchis
sinensis]
Length = 395
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/306 (48%), Positives = 211/306 (68%), Gaps = 18/306 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LK+GTGGRSSFNG+VATVFGA+G +G + L K G+QIIIPYRG+ Y VRDL++ GDL
Sbjct: 42 LKRGTGGRSSFNGMVATVFGATGRLGRNVITHLAKTGTQIIIPYRGDPYFVRDLKVLGDL 101
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+LF P+H +++ IR++++YS+VVINLIG+E T+NFT+ +V+ AR+AR+S+EM
Sbjct: 102 GQILFLPFHLEDENTIRQSMRYSDVVINLIGKETHTRNFTLEQVHVDGAARIARISQEME 161
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++ +H+SAL +P+PP Y+ G S+F ++K GE EVLRE P+A IFRP+DM+G D+F
Sbjct: 162 VDRLVHVSALCQNPDPPC-YVRGPSRFMKSKAAGELEVLRERPDAIIFRPADMFGEQDRF 220
Query: 186 LRYYGHMWRHV----FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
L YY R V + ++ G++TIKQPVY+GDVA IV + PD+ G+IY+AVG
Sbjct: 221 LCYYAAKPRRVGMGRTTDVPLWALGQKTIKQPVYIGDVARGIVNSLTAPDSPGRIYEAVG 280
Query: 242 PKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTP--- 298
P RY L +L+ W + + + Y+ +L + P+ L + LF Y M +TP
Sbjct: 281 PHRYRLDDLVKWIYFICR-------YFPNELNIVRISPIFL-MRVLFNQY-MARVTPFLS 331
Query: 299 -ERVER 303
ER+ER
Sbjct: 332 FERLER 337
>gi|115646184|gb|ABJ16967.1| IP02858p [Drosophila melanogaster]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/224 (56%), Positives = 168/224 (75%), Gaps = 1/224 (0%)
Query: 81 IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
IR A+K+SNVVINL+GR+F TKNF D +V R+AR+++E GVE+ IH+S+LN + N
Sbjct: 34 IRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAGVERLIHLSSLNVEAN 93
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
P Y+ GGS++ ++KY+GE V FP ATI RP+D+YGS D+FLRYY H+WR FR +
Sbjct: 94 PKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSM 153
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260
++ KGE+T+KQPVYV DVA AI+ A KDPD+AG+IYQAVGPKRY LSEL+DWFH +M+K
Sbjct: 154 PLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIYQAVGPKRYQLSELVDWFHRLMRK 213
Query: 261 GEPDYGYYRYDLRYDPVMPLKLFINGLF-PGYPMGHLTPERVER 303
+ +GY RYD+R+DP LK +N PG P+G L P R+ER
Sbjct: 214 DQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPARIER 257
>gi|380023100|ref|XP_003695367.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Apis florea]
Length = 398
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 135/277 (48%), Positives = 189/277 (68%), Gaps = 3/277 (1%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LK+GTGGRSSFNG+V TVFG SG++GS LC +LGK G+Q+I+P+R + Y +R+L++ GDL
Sbjct: 43 LKRGTGGRSSFNGIVCTVFGCSGFIGSSLCIRLGKIGTQLILPHRCDHYHIRELKVGGDL 102
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVL+ P+ R+++ I + IKYSNVVINLIG + T+NF+ D +VE LA+L+K+
Sbjct: 103 GQVLYHPFDLRDEESIIRTIKYSNVVINLIGSNYETRNFSFEDVHVEGARTLAKLAKQCN 162
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+S LN + P + S+ +TK++GE V EFPEATI RPS +YG DKF
Sbjct: 163 VERFIHMSCLNVEEKPTPIILKESSKILKTKWKGELAVKEEFPEATIIRPSVIYGHKDKF 222
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
+ +Y R + +L ++ KGE+T K PV + DV + IVA ++ D AGK YQ VGPK+Y
Sbjct: 223 ISHYMDQNRLILNELPLWNKGEKTEKHPVSIHDVISGIVAIVRNSDTAGKTYQFVGPKQY 282
Query: 246 LLSELLDW-FHVVMKKGEPDYGYYRYDLRYDPVMPLK 281
L+EL+ W F V K E + D++Y+P LK
Sbjct: 283 KLNELVKWMFDVKFKYFENNIKI--VDMKYNPYAWLK 317
>gi|56756627|gb|AAW26486.1| SJCHGC05906 protein [Schistosoma japonicum]
Length = 394
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 129/260 (49%), Positives = 188/260 (72%), Gaps = 9/260 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LK+GTGGR+SFNG+V TVFGA+GY+G L L K G+QII+PYR + + +R +++ GDL
Sbjct: 41 LKRGTGGRASFNGMVVTVFGATGYLGRVLMTHLAKTGTQIIVPYRCDPHMIRGMKVVGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+LF PY+ ++D+ +RKA+KYS+VVINLIG EF T+NFTI + +++ R+A++SKE+G
Sbjct: 101 GQILFLPYNLKDDECLRKAMKYSDVVINLIGTEFDTRNFTIEEVHIDAACRIAKISKEIG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+ +H+SAL + NP Y+ S+F +K GE+EVLRE P+ATIFRP++++G D+F
Sbjct: 161 VEQLVHVSALCQNKNPQK-YVRKPSRFMISKAIGEEEVLRERPDATIFRPAEIWGPLDRF 219
Query: 186 LRYYGHMWRH------VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
L Y+ R VF L Y GE TIKQPVYVGD+A I+ +P++ G+IY+A
Sbjct: 220 LCYFASKPRRHNGIQTVFVPLWSY--GEHTIKQPVYVGDIARGIINCLHNPESLGQIYEA 277
Query: 240 VGPKRYLLSELLDWFHVVMK 259
VGP RY L +++ W +++ +
Sbjct: 278 VGPHRYRLDDIVKWIYLICR 297
>gi|226482528|emb|CAX73863.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Schistosoma
japonicum]
Length = 394
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 129/260 (49%), Positives = 188/260 (72%), Gaps = 9/260 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LK+GTGGR+SFNG+V TVFGA+GY+G L L K G+QII+PYR + + +R +++ GDL
Sbjct: 41 LKRGTGGRASFNGMVVTVFGATGYLGRVLMTHLAKTGTQIIVPYRCDPHMIRGMKVVGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+LF PY+ ++D+ +RKA+KYS+VVINLIG EF T+NFTI + +++ R+A++SKE+G
Sbjct: 101 GQILFLPYNLKDDECLRKAMKYSDVVINLIGTEFDTRNFTIEEVHIDAACRIAKISKEIG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+ +H+SAL + NP Y+ S+F +K GE+EVLRE P+ATIFRP++++G D+F
Sbjct: 161 VEQLVHVSALCQNKNPQK-YVRKPSRFMISKAIGEEEVLRERPDATIFRPAEIWGPLDRF 219
Query: 186 LRYYGHMWRH------VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
L Y+ R VF L Y GE TIKQPVYVGD+A I+ +P++ G+IY+A
Sbjct: 220 LCYFASKPRRHNGIQTVFVPLWSY--GEHTIKQPVYVGDIARGIINCLHNPESLGQIYEA 277
Query: 240 VGPKRYLLSELLDWFHVVMK 259
VGP RY L +++ W +++ +
Sbjct: 278 VGPHRYRLDDIVKWIYLICR 297
>gi|324506569|gb|ADY42802.1| NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9 [Ascaris
suum]
Length = 446
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 187/276 (67%), Gaps = 8/276 (2%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+KGTGGR SF+G V TVFGA+G++G + N+L KQGSQ+IIPYR + Y VR+ ++ G++
Sbjct: 62 FRKGTGGRCSFSGNVVTVFGATGFLGLSVVNRLAKQGSQLIIPYRQDPYWVREHKVVGEV 121
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+LF P+ +++ IR+ +KYSNVV+N+IG + ATK ++ A+ +V R+AR++KEMG
Sbjct: 122 GQILFFPFELKDEQSIRRVVKYSNVVVNMIGTKHATKKYSFAETHVNGARRIARIAKEMG 181
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIHISALNA +P + GS+F RTK GE+ V EF EATI RP+ M+G D F
Sbjct: 182 VERFIHISALNATTHPTPVLLKNGSEFLRTKAYGEEAVRDEFREATIIRPALMFGENDAF 241
Query: 186 LRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
++YY WR + +YK GE+T K P++ GDVA + DP AGK Y+ VGP
Sbjct: 242 IQYYVSRWRKTPLDHVWLYKAGEKTFKMPIWGGDVAMGVEKVVLDPTTAGKTYEFVGPHC 301
Query: 245 YLLSELLDWFHVVMKKGE--PDYGYY--RYDLRYDP 276
Y LSEL+D+ + +K P +G++ R+ R++P
Sbjct: 302 YQLSELMDFMY---RKAHCLPQFGFHYKRHGSRFNP 334
>gi|242005047|ref|XP_002423386.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, putative [Pediculus
humanus corporis]
gi|212506430|gb|EEB10648.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, putative [Pediculus
humanus corporis]
Length = 400
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/303 (45%), Positives = 196/303 (64%), Gaps = 6/303 (1%)
Query: 4 VHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD--VRDLRL 61
LK+GTGGRSSFNG V T+FGA+G++G Y+CN+LGK+G+QIIIPYR + D +++L+L
Sbjct: 34 TSLKRGTGGRSSFNGNVVTIFGATGFLGRYICNQLGKRGAQIIIPYRCDPDDQSLKNLKL 93
Query: 62 CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLS 121
GDLGQ+LFQP+ ++ IRKA+KYSNVVINLIGR + TKNF+ +V A +A+
Sbjct: 94 MGDLGQILFQPFDLKDPVSIRKAVKYSNVVINLIGRIYETKNFSYHQVHVMGAAEIAKAC 153
Query: 122 KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGS 181
+E VE+ IH S LN + +P Y+ F +K QGE V+ EFP+ATIFRPS +YG
Sbjct: 154 REHNVERLIHFSTLNVNKDP-NQYVFKKINFNPSKLQGEIAVMEEFPDATIFRPSCVYGK 212
Query: 182 GDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
D FLR + R F+++ +Y KG++TIK PV+ D++ A+V A + D GKI QAVG
Sbjct: 213 EDDFLRPLFTLRRQTFQRIPLYAKGKKTIKCPVFAPDISRAVVLAIDNYDMRGKIIQAVG 272
Query: 242 PKRYLLSELLDWFHVVMK--KGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPE 299
P+RY L +L+ + +++ P RY+L + + + L+P P G L E
Sbjct: 273 PERYYLHDLVTYCGQILQLNGNGPVVSELRYNLPFFSKLKFNEIMQSLYPDPPAG-LCME 331
Query: 300 RVE 302
R E
Sbjct: 332 RFE 334
>gi|351696891|gb|EHA99809.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Heterocephalus glaber]
Length = 377
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 177/262 (67%), Gaps = 12/262 (4%)
Query: 2 CRVH---LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD 58
C++H L G GGRSS +GVVATVFGA+G++G Y+ N+LG+ GSQ+IIPYR + YD+
Sbjct: 34 CQLHHAVLPHGKGGRSSISGVVATVFGATGFLGRYVVNRLGRMGSQVIIPYRCDTYDIMR 93
Query: 59 LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLA 118
LR GDLGQ+ F + R+ D +R+A+++SNVVINL+GR++ T NF D V+IP +A
Sbjct: 94 LRPMGDLGQLTFLEWDARDRDSVRRAVQHSNVVINLVGRDWETTNFDFEDVFVKIPQAIA 153
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
++SKE GVEK IH+S LNAD I S++ R K GEKEV FPEATI +PSD+
Sbjct: 154 QVSKEAGVEKLIHVSHLNAD-------IKSSSKYLRNKAVGEKEVRDAFPEATIIKPSDI 206
Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
+G D+FL + +M F L + G +T+KQPVYV DVAA IV A KDPDA GK +
Sbjct: 207 FGREDRFLNRFANM--RYFVGLPLISLGLKTVKQPVYVVDVAAGIVNAIKDPDAKGKTFA 264
Query: 239 AVGPKRYLLSELLDWFHVVMKK 260
GP RYLL +L+ + + V K
Sbjct: 265 FAGPSRYLLFDLMQYIYAVAYK 286
>gi|340729515|ref|XP_003403046.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Bombus terrestris]
Length = 402
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 135/300 (45%), Positives = 199/300 (66%), Gaps = 4/300 (1%)
Query: 5 HLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD 64
+LK+GTGGRSSFNG+V T+FG SG++G+ L +LGK G+Q+I+P+R + Y +R+L++ GD
Sbjct: 46 NLKRGTGGRSSFNGIVCTIFGCSGFIGNSLSIRLGKTGTQLILPHRCDPYHIRELKVGGD 105
Query: 65 LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM 124
LGQV + P+ ++++ I ++IKYSNVVINLIG+ + T NF+ D +VE LARL+K+
Sbjct: 106 LGQVYYHPFDLKDEESIIRSIKYSNVVINLIGQTYETSNFSFDDVHVEGARTLARLAKKC 165
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
VE+FIH+S LNA+ P I GS+ ++K++GE V EFPEATI RPS +YG DK
Sbjct: 166 NVERFIHMSCLNAEEKPTPMIIQDGSKMLKSKWRGEVAVREEFPEATIVRPSVIYGRMDK 225
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
F+ +Y R F + ++ KGE+T KQPVY+ DV + +VA ++PD AGK YQ VG +R
Sbjct: 226 FVSHYMSADRTTFEYIPLWHKGEKTEKQPVYIHDVISGLVAIIRNPDTAGKTYQFVGSER 285
Query: 245 YLLSELLD-WFHVVMKKGEPDYGYYRYDLRYDPVMPLK-LFINGLFPGYPMGHLTPERVE 302
+ L+ L++ F + MK D++ +P LK F + P +P L+ E +E
Sbjct: 286 FKLNNLVNMMFEIKMKYV--GNNMLVSDMKINPYFWLKTTFAELIAPVHPTIDLSWEILE 343
>gi|426225688|ref|XP_004006995.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Ovis aries]
Length = 380
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/256 (50%), Positives = 175/256 (68%), Gaps = 11/256 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G YL N LG+ GSQ+I+PYR YD LR GDL
Sbjct: 41 IPHGKGGRSSVSGIVATVFGATGFLGRYLVNHLGRMGSQVIVPYRCEPYDTMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F ++ R+ D IR+A+++SNVVINL+GRE+ TKNF D V+IP +A++SKE G
Sbjct: 101 GQIIFMDWNGRDKDSIRRAVEHSNVVINLVGREWETKNFDFEDVFVKIPQAIAQVSKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIHIS LNAD I S++ R K GEKEV FPEATI +P+D++G D+F
Sbjct: 161 VEKFIHISHLNAD-------IKSSSKYLRNKAVGEKEVRETFPEATIIKPADIFGREDRF 213
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L Y+ ++ W F + + G++T+KQPVY+ DV I+ A KDPDA GK + VGP R
Sbjct: 214 LNYFANIRW---FGGVPLISLGKKTVKQPVYIVDVTKGIINAIKDPDARGKTFAFVGPNR 270
Query: 245 YLLSELLDWFHVVMKK 260
YLL +L+ + V +
Sbjct: 271 YLLFDLVQYVFAVAHR 286
>gi|335288570|ref|XP_003126608.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Sus scrofa]
Length = 377
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/253 (50%), Positives = 173/253 (68%), Gaps = 11/253 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+PYR YD LR GDL
Sbjct: 41 IPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCEPYDTMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F ++ ++ D IRK +++SNVVINL+GRE+ TKNF D V+IP +A++SKE G
Sbjct: 101 GQIIFMEWNGKDKDSIRKVVEHSNVVINLVGREWETKNFDFEDVFVKIPHAIAQVSKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEK IHIS LNAD P+ Y+ R+K GEKEV FPEATI +PSD++G D+F
Sbjct: 161 VEKLIHISHLNADIKSPSRYL-------RSKAVGEKEVRAAFPEATIIKPSDIFGREDRF 213
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L Y+ M W F + + G+ET+KQPVY+ DV+ I+ A KDPDA GK + VGP R
Sbjct: 214 LNYFASMRW---FGGVPLISLGKETVKQPVYIVDVSKGIINAIKDPDAKGKTFAFVGPNR 270
Query: 245 YLLSELLDWFHVV 257
YLL +L+ + V
Sbjct: 271 YLLFDLVQYIFAV 283
>gi|350411637|ref|XP_003489411.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Bombus impatiens]
Length = 402
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/256 (48%), Positives = 180/256 (70%), Gaps = 1/256 (0%)
Query: 5 HLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD 64
+LK+GTGGRSSFNG+V T+FG G++G+ L +LGK G+Q+I+P+R + Y V++L++ GD
Sbjct: 46 NLKRGTGGRSSFNGIVCTIFGCGGFVGNSLSIRLGKIGTQLILPHRCDPYHVKELKVGGD 105
Query: 65 LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM 124
LGQV + P+ R+++ I + IKYSNVVINLIG+ + T NF+ D +VE LARL+K+
Sbjct: 106 LGQVYYHPFDLRDEESIIRTIKYSNVVINLIGQTYETSNFSFDDVHVEGARTLARLAKKC 165
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
VE+FIH+S +NA+ P I GGS+ ++K++GE V EFPEATI RPS +YG D
Sbjct: 166 NVERFIHMSCINAEEKPTPMMIQGGSKMLKSKWKGEIAVREEFPEATIVRPSVIYGPMDT 225
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
F+ +Y R F + +++KGE T KQPVY+ DV + +VA ++PD AGK YQ +G +R
Sbjct: 226 FVSHYMSPIRTTFEYIPLWRKGENTEKQPVYIHDVISGLVAIIRNPDTAGKTYQFIGSQR 285
Query: 245 YLLSELLD-WFHVVMK 259
Y L+ L++ F + MK
Sbjct: 286 YKLNNLINMMFDIKMK 301
>gi|410963573|ref|XP_003988339.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Felis catus]
Length = 377
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/246 (52%), Positives = 173/246 (70%), Gaps = 11/246 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +GVVATVFGA+G++G Y+ N+LG+ GSQ+IIPYR YD LR GDLGQ+
Sbjct: 44 GKGGRSSVSGVVATVFGATGFLGRYVVNRLGRMGSQVIIPYRCEAYDTMHLRPMGDLGQI 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+F ++ ++ D IR+A+K+SNVVINL+GRE+ TKNF D V+IP +A++SKE GVEK
Sbjct: 104 IFLEWNGKDKDSIRRAVKHSNVVINLVGREWETKNFDFEDVFVKIPQAIAQVSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNAD I S++ R K GEKEV FPEA I +PSD++G D+FL +
Sbjct: 164 FIHVSHLNAD-------IKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRFLNH 216
Query: 189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++ W F + + G++T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FANIRW---FGGVPLISLGKKTVKQPVYVVDVSKGIVNAIKDPDARGKSFAFVGPSRYLL 273
Query: 248 SELLDW 253
+L+ +
Sbjct: 274 FDLVQY 279
>gi|359323061|ref|XP_534915.3| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial isoform 1 [Canis lupus
familiaris]
Length = 377
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/246 (53%), Positives = 171/246 (69%), Gaps = 11/246 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD LR GDLGQ+
Sbjct: 44 GKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDPYDTMHLRPMGDLGQI 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+F + RN D I++A+K+SNVVINLIGRE+ TKNF D V+IP +A++SKE GVEK
Sbjct: 104 IFLEWDGRNKDSIQRAVKHSNVVINLIGREWETKNFDFEDVFVKIPQAIAKVSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNAD I S++ R K GEKEV FPEA I +PSD++G D+FL +
Sbjct: 164 FIHVSHLNAD-------IKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRFLNH 216
Query: 189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + W F + + G++T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FANTRW---FGGVPLISLGKKTVKQPVYVVDVSKGIVNAIKDPDAKGKSFAFVGPNRYLL 273
Query: 248 SELLDW 253
+L+ +
Sbjct: 274 FDLVQY 279
>gi|335773127|gb|AEH58289.1| mitochondrial NADH dehydrogenase (ubiquinone) 1 alph subcomplex
subunit 9-like protein [Equus caballus]
Length = 377
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/255 (49%), Positives = 176/255 (69%), Gaps = 9/255 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+I+PYR + YD LR GDL
Sbjct: 41 IPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCDTYDTMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F ++ RN D IR+A+++SNVVINL+GRE+ TKNF D V+IP +A++SKE G
Sbjct: 101 GQIIFLEWNGRNKDSIRRAVEHSNVVINLVGREWETKNFDFEDVFVKIPLAIAQVSKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIH+S LNAD I S++ R K GEKEV FPEATI +P+D++G D+F
Sbjct: 161 VEKFIHVSHLNAD-------IKSSSRYLRNKAVGEKEVRNAFPEATIIKPADIFGREDRF 213
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L ++ ++ F + + G++T+KQPVYV DV+ I+ A KDP A GK + VGP RY
Sbjct: 214 LNHFANI--RSFGGVPLISLGKKTVKQPVYVVDVSKGIINAIKDPSARGKTFVFVGPNRY 271
Query: 246 LLSELLDWFHVVMKK 260
+L +L+ + + V +
Sbjct: 272 VLFDLVQYVYAVAHR 286
>gi|327273277|ref|XP_003221407.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Anolis carolinensis]
Length = 380
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/255 (49%), Positives = 174/255 (68%), Gaps = 9/255 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GRSS +GVVATVFGA+G++G Y+ N+LG+ GSQ++IPYR + YD+ LR GDL
Sbjct: 43 IPHGKSGRSSVSGVVATVFGATGFLGRYVVNRLGRIGSQVVIPYRCDQYDLMYLRPMGDL 102
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+LF + + D IR+A++YSNVVINLIG+E+ T+NF D V IP +A+LS+E G
Sbjct: 103 GQLLFMEWDSHDKDSIRRALEYSNVVINLIGKEWETRNFKYEDVFVNIPRNIAQLSREAG 162
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEK IHIS LNAD P+ Y+ R K GE+ V EFP+A I +PS+M+G D+F
Sbjct: 163 VEKLIHISHLNADVKSPSKYL-------RNKAIGERVVREEFPDAIILKPSEMFGREDRF 215
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
+Y +M H F + + G +T+KQP+YV DVA AI++A KDPDA GK Y GP RY
Sbjct: 216 FNHYANM--HWFGGVPLIAFGRKTVKQPIYVSDVAKAIISAIKDPDAKGKTYTLTGPHRY 273
Query: 246 LLSELLDWFHVVMKK 260
LL +L+ + + V+ +
Sbjct: 274 LLYDLVQYLYAVLHR 288
>gi|341890335|gb|EGT46270.1| hypothetical protein CAEBREN_21857 [Caenorhabditis brenneri]
Length = 429
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 134/266 (50%), Positives = 175/266 (65%), Gaps = 6/266 (2%)
Query: 5 HLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD 64
+KG GGRSSF+G V TVFGASG++G + NK K GSQIIIPYR + Y +R+ ++ G+
Sbjct: 47 QFRKGAGGRSSFSGNVVTVFGASGFLGLPVVNKFAKNGSQIIIPYRQDPYYMREHKVLGE 106
Query: 65 LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM 124
LGQVL+ P+ ++++ IRK +KYSNVV+NLIG T N+ D N RLA++ KEM
Sbjct: 107 LGQVLYFPFELKDEESIRKVVKYSNVVVNLIGTRVPTGNYGYDDVNNVGARRLAKICKEM 166
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
GVEKF+H+SAL A P+PP + S+F RTK GE V EFPEATI RPS +YG D
Sbjct: 167 GVEKFVHLSALGATPDPPKGHFVAKSEFLRTKGLGEIAVREEFPEATIIRPSVIYGELDG 226
Query: 185 FLRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
F++YY WR + +YKKGE+T K P++VGDVA I DP A G Y+ VGP
Sbjct: 227 FIQYYVSRWRKTPLDHVYLYKKGEQTYKMPIWVGDVALGIDRVVNDPTAKGHTYEFVGPH 286
Query: 244 RYLLSELLDWFHVVMKKGE--PDYGY 267
Y LSEL+D+ + KK PD+G+
Sbjct: 287 CYQLSELIDFMY---KKAHCLPDFGF 309
>gi|149712374|ref|XP_001494651.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Equus caballus]
Length = 377
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 125/255 (49%), Positives = 176/255 (69%), Gaps = 9/255 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+++PYR + YD LR GDL
Sbjct: 41 IPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVMVPYRCDTYDTMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F ++ RN D IR+A+++SNVVINL+GRE+ TKNF D V+IP +A++SKE G
Sbjct: 101 GQIIFLEWNGRNKDSIRRAVEHSNVVINLVGREWETKNFDFEDVFVKIPLAIAQVSKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIH+S LNAD I S++ R K GEKEV FPEATI +P+D++G D+F
Sbjct: 161 VEKFIHVSHLNAD-------IKSSSRYLRNKAVGEKEVRNAFPEATIIKPADIFGREDRF 213
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L ++ ++ F + + G++T+KQPVYV DV+ I+ A KDP A GK + VGP RY
Sbjct: 214 LNHFANI--RSFGGVPLISLGKKTVKQPVYVVDVSKGIINAIKDPSARGKTFVFVGPNRY 271
Query: 246 LLSELLDWFHVVMKK 260
+L +L+ + + V +
Sbjct: 272 VLFDLVQYVYAVAHR 286
>gi|301770135|ref|XP_002920484.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like isoform 1 [Ailuropoda
melanoleuca]
Length = 401
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 128/256 (50%), Positives = 175/256 (68%), Gaps = 11/256 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+PYR + YD LR GDL
Sbjct: 65 IPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCDPYDTMHLRPMGDL 124
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F + RN D IR+A+++SNVVINL+GRE+ TKNF D V+IP +A++SKE G
Sbjct: 125 GQIIFLEWDGRNKDSIRRAVEHSNVVINLVGREWETKNFDFEDVFVKIPQAIAQVSKEAG 184
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIH+S LNAD I S++ R K GEKEV FPEA I +PSD++G D+F
Sbjct: 185 VEKFIHVSHLNAD-------IKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRF 237
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L ++ + W F + + G++T+KQPVYV DV+ IV+A KDPD+ GK + VGP R
Sbjct: 238 LNHFANTRW---FGGVPLISLGKKTVKQPVYVVDVSKGIVSAVKDPDSRGKSFAFVGPNR 294
Query: 245 YLLSELLDWFHVVMKK 260
YLL +L+ + + K
Sbjct: 295 YLLFDLVQYVFAMAHK 310
>gi|348519170|ref|XP_003447104.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Oreochromis niloticus]
Length = 381
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 132/298 (44%), Positives = 192/298 (64%), Gaps = 16/298 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ KG GGRSSF+G+ ATVFGA+G++G Y+ N+LG+ GSQIIIP+R + YD+ R GDL
Sbjct: 44 IPKGKGGRSSFSGIAATVFGATGFLGRYVVNRLGRIGSQIIIPHRCDQYDLMHFRPMGDL 103
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F + RN D I++A+++S+VVINL+GRE+ T+NF D V IP ++AR ++E G
Sbjct: 104 GQIIFLEWDARNKDSIKRAMEHSDVVINLVGREWETRNFRFEDVFVTIPQQIARAAREAG 163
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
+ KF+H+S LNAD P+ Y+ R K GE V EFP+A I +PS+M+G D+F
Sbjct: 164 ITKFVHMSHLNADIRSPSKYL-------RNKAVGETAVREEFPDAIIMKPSEMFGREDRF 216
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
YY +M R + + G++T+KQPV+V DVA AI++A +DPDA GK Y VGP RY
Sbjct: 217 FNYYANM-RWFGNAVPLIALGKKTVKQPVHVVDVAKAIISAIRDPDANGKTYALVGPNRY 275
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVER 303
LL +L+++ + V + Y R P+ L + + P P TP++V+R
Sbjct: 276 LLHDLVEYIYAVAHRPFVPYPLPR------PLFHLAAQLFAMNPFEPWT--TPDKVDR 325
>gi|281353113|gb|EFB28697.1| hypothetical protein PANDA_009221 [Ailuropoda melanoleuca]
Length = 360
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/256 (50%), Positives = 175/256 (68%), Gaps = 11/256 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+PYR + YD LR GDL
Sbjct: 24 IPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCDPYDTMHLRPMGDL 83
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F + RN D IR+A+++SNVVINL+GRE+ TKNF D V+IP +A++SKE G
Sbjct: 84 GQIIFLEWDGRNKDSIRRAVEHSNVVINLVGREWETKNFDFEDVFVKIPQAIAQVSKEAG 143
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIH+S LNAD I S++ R K GEKEV FPEA I +PSD++G D+F
Sbjct: 144 VEKFIHVSHLNAD-------IKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRF 196
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L ++ + W F + + G++T+KQPVYV DV+ IV+A KDPD+ GK + VGP R
Sbjct: 197 LNHFANTRW---FGGVPLISLGKKTVKQPVYVVDVSKGIVSAVKDPDSRGKSFAFVGPNR 253
Query: 245 YLLSELLDWFHVVMKK 260
YLL +L+ + + K
Sbjct: 254 YLLFDLVQYVFAMAHK 269
>gi|301770137|ref|XP_002920485.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like isoform 2 [Ailuropoda
melanoleuca]
Length = 377
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/256 (50%), Positives = 175/256 (68%), Gaps = 11/256 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+PYR + YD LR GDL
Sbjct: 41 IPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCDPYDTMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F + RN D IR+A+++SNVVINL+GRE+ TKNF D V+IP +A++SKE G
Sbjct: 101 GQIIFLEWDGRNKDSIRRAVEHSNVVINLVGREWETKNFDFEDVFVKIPQAIAQVSKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIH+S LNAD I S++ R K GEKEV FPEA I +PSD++G D+F
Sbjct: 161 VEKFIHVSHLNAD-------IKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRF 213
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L ++ + W F + + G++T+KQPVYV DV+ IV+A KDPD+ GK + VGP R
Sbjct: 214 LNHFANTRW---FGGVPLISLGKKTVKQPVYVVDVSKGIVSAVKDPDSRGKSFAFVGPNR 270
Query: 245 YLLSELLDWFHVVMKK 260
YLL +L+ + + K
Sbjct: 271 YLLFDLVQYVFAMAHK 286
>gi|348555012|ref|XP_003463318.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Cavia porcellus]
Length = 377
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/253 (50%), Positives = 173/253 (68%), Gaps = 11/253 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N+LG+ GSQ+I+PYR + YD+ LR GDL
Sbjct: 41 IPHGKGGRSSVSGIVATVFGATGFLGRYVVNRLGQMGSQVILPYRCDTYDIMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+ F + R+ D IR+A++YSNVVINL+GR++ T+NF D V+IP +A+ S E G
Sbjct: 101 GQLTFLEWDARDKDSIRRAVQYSNVVINLVGRDWETRNFDFEDVFVKIPQAIAQASMEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEK IH+S LNAD I S++ R+K GEKEV FPEATI RPSD++G D+F
Sbjct: 161 VEKLIHVSHLNAD-------IKSTSRYLRSKAVGEKEVSDAFPEATIIRPSDIFGREDRF 213
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L ++ ++ W F + + G +T+KQPVYV DVA I+ A KDPDA GK + VGP R
Sbjct: 214 LNHFANIRW---FIGVPLVSLGLKTVKQPVYVVDVAKGIINAVKDPDAKGKTFAFVGPNR 270
Query: 245 YLLSELLDWFHVV 257
YLL +L+ + V
Sbjct: 271 YLLFDLMQYIFAV 283
>gi|224095898|ref|XP_002188497.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Taeniopygia guttata]
Length = 373
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 174/250 (69%), Gaps = 11/250 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GRSS +G+VATVFGA+G++G Y+ N+LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 41 GRSGRSSVSGIVATVFGATGFLGRYVVNRLGRIGSQVIIPYRCDQYDLMYLRPMGDLGQL 100
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+A+++SNVVINLIG+E+ TKNF D V IP +AR+SKE GVEK
Sbjct: 101 LFLEWDCRDKDSIRRAVEHSNVVINLIGKEWETKNFKFEDEFVNIPQSIARISKEAGVEK 160
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA P+ Y+ R K GE+ V EFP+A I +PS+M+G D+FL +
Sbjct: 161 FIHVSHLNASMKSPSKYL-------RNKAVGEEAVREEFPDAVILKPSEMFGREDRFLNH 213
Query: 189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
Y +M W F + + G++T+KQPVYV DVA AIV A K+PDA GK Y GP RYLL
Sbjct: 214 YANMRW---FGGVPLVSLGKKTVKQPVYVVDVAKAIVNAIKNPDAKGKTYALAGPHRYLL 270
Query: 248 SELLDWFHVV 257
+++++ + V
Sbjct: 271 YDMVEYIYAV 280
>gi|391345481|ref|XP_003747014.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Metaseiulus occidentalis]
Length = 389
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 194/298 (65%), Gaps = 9/298 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L+KGTGGRSSFNG++AT+FG++G++ Y+ N LG+ G+ +++P+R + Y + L++ GDL
Sbjct: 42 LRKGTGGRSSFNGIIATIFGSNGFLARYVINALGQTGAMMVLPHRCDPYLMMRLKVAGDL 101
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+ F + R++ I A++YSNVVINLIG++ A+ NF++ D +V+ +ARL++E G
Sbjct: 102 GQIQFHFFDLRDEKSIAAAMQYSNVVINLIGKDQASGNFSLDDVHVKGARSIARLARESG 161
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEK IH SALNA P + S+F+ TK++GE+ V EFP+A +FRPSDMYG D+F
Sbjct: 162 VEKLIHFSALNAAEKPEKLMFA-PSKFFSTKWEGEQVVREEFPDAIVFRPSDMYGHEDRF 220
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
+RYY WR + + ++K G + K PV+VGDVA A+V A G+ YQAVGPK Y
Sbjct: 221 VRYYSGQWRCNYSVMPLWKGGRKIYKAPVFVGDVARAVVEAINQKGNEGETYQAVGPKLY 280
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVER 303
L L+ + ++++ + YDLR+DP+ K+ LF M + ER+ R
Sbjct: 281 ELRSLMRYISQLLER-----EMHLYDLRFDPLFMAKISYAELFKNPKM---SWERLRR 330
>gi|45430053|ref|NP_991386.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial precursor [Bos taurus]
gi|464255|sp|P34943.1|NDUA9_BOVIN RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
gi|228|emb|CAA42053.1| NADH dehydrogenase (ubiquinone) 42 kDa subunit [Bos taurus]
gi|74268236|gb|AAI02360.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Bos
taurus]
gi|296487076|tpg|DAA29189.1| TPA: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial precursor [Bos taurus]
Length = 380
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/256 (48%), Positives = 176/256 (68%), Gaps = 11/256 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+P+R YD LR GDL
Sbjct: 41 IPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F ++ R+ D IR+A+++S+VVINL+GRE+ T+NF D V+IP +A++SKE G
Sbjct: 101 GQIIFMDWNGRDKDSIRRAVEHSSVVINLVGREWETQNFDFEDVFVKIPQAIAQVSKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIHIS LNAD I S++ R+K GEKEV FPEATI +P++++G D+F
Sbjct: 161 VEKFIHISHLNAD-------IKSSSKYLRSKAVGEKEVRETFPEATIIKPAEIFGREDRF 213
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L Y+ ++ W F + + G++T+KQPVY+ DV I+ A KDPDA GK + VGP R
Sbjct: 214 LNYFANIRW---FGGVPLISLGKKTVKQPVYIVDVTKGIINAIKDPDARGKTFAFVGPSR 270
Query: 245 YLLSELLDWFHVVMKK 260
YLL +L+ + V +
Sbjct: 271 YLLFDLVQYVFAVAHR 286
>gi|95768472|gb|ABF57357.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Bos
taurus]
Length = 369
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 124/256 (48%), Positives = 176/256 (68%), Gaps = 11/256 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+P+R YD LR GDL
Sbjct: 30 IPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGDL 89
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F ++ R+ D IR+A+++S+VVINL+GRE+ T+NF D V+IP +A++SKE G
Sbjct: 90 GQIIFMDWNGRDKDSIRRAVEHSSVVINLVGREWETQNFDFEDVFVKIPQAIAQVSKEAG 149
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIHIS LNAD I S++ R+K GEKEV FPEATI +P++++G D+F
Sbjct: 150 VEKFIHISHLNAD-------IKSSSKYLRSKAVGEKEVRETFPEATIIKPAEIFGREDRF 202
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L Y+ ++ W F + + G++T+KQPVY+ DV I+ A KDPDA GK + VGP R
Sbjct: 203 LNYFANIRW---FGGVPLISLGKKTVKQPVYIVDVTKGIINAIKDPDARGKTFAFVGPSR 259
Query: 245 YLLSELLDWFHVVMKK 260
YLL +L+ + V +
Sbjct: 260 YLLFDLVQYVFAVAHR 275
>gi|355706788|gb|AES02751.1| NADH dehydrogenase 1 alpha subcomplex, 9, 39kDa [Mustela putorius
furo]
Length = 376
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 127/256 (49%), Positives = 174/256 (67%), Gaps = 11/256 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+PYR + YD LR GDL
Sbjct: 41 IPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCDPYDTMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F + RN D I +A+K+SNVVINL+GRE+ TKNF D V+IP +A++SKE G
Sbjct: 101 GQIIFLEWDGRNRDSIHRAVKHSNVVINLVGREWETKNFDFEDVFVKIPQAIAQVSKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIH+S LNAD I S++ R K GEKEV FPEA I +PSD++G D+F
Sbjct: 161 VEKFIHVSHLNAD-------IKSSSRYLRNKAVGEKEVRDVFPEAIIIKPSDIFGREDRF 213
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L ++ ++ W F + + G++T+KQPVYV DV+ I+ A KDPD+ GK + VGP R
Sbjct: 214 LNHFANIRW---FGGVPLISLGKKTVKQPVYVVDVSKGIINAIKDPDSRGKSFAFVGPNR 270
Query: 245 YLLSELLDWFHVVMKK 260
YLL +L+ + V +
Sbjct: 271 YLLFDLVQYAFAVAHR 286
>gi|389614906|dbj|BAM20455.1| NADH-ubiquinone oxidoreductase 39 kda subunit, partial [Papilio
polytes]
Length = 305
Score = 249 bits (637), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 130/247 (52%), Positives = 170/247 (68%), Gaps = 4/247 (1%)
Query: 59 LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLA 118
L++ GDLGQVLF P+ R+++ I KA+KYSNVVINL+GR++ TKNF+ D +V+ RLA
Sbjct: 4 LKVAGDLGQVLFTPFDLRDEESIAKAVKYSNVVINLVGRDYETKNFSYTDVHVDGARRLA 63
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
R+ +EM VE+FIH+S LNA+ NP + S F +KY GE V EFP ATI R SD+
Sbjct: 64 RICREMCVERFIHLSYLNAESNPKPLLLKKPSMFKISKYLGECAVREEFPTATIIRASDI 123
Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
YGS D+FLR WR + VYK G+ETIKQPVYV DVA IV A +DPD +IYQ
Sbjct: 124 YGSEDRFLRSLATSWRSHGNLVPVYKNGKETIKQPVYVSDVAQGIVNAARDPDTRCQIYQ 183
Query: 239 AVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPV-MPLKL-FINGLFPGYPMGHL 296
A+GPKRYLL++L+DWF+ +M+K GY RYD++YDP+ L++ N L P YP G L
Sbjct: 184 AIGPKRYLLADLIDWFYKLMRKDRA--GYRRYDMKYDPIFFSLRVAAANMLSPAYPFGGL 241
Query: 297 TPERVER 303
E +E+
Sbjct: 242 HWEGLEK 248
>gi|115502293|sp|Q0MQB3.2|NDUA9_GORGO RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
Length = 377
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 129/252 (51%), Positives = 169/252 (67%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKNF D V+IP +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 274
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 275 HLVKYIFAVAHR 286
>gi|111662266|gb|ABH12230.1| mitochondrial complex I subunit NDUFA9 [Gorilla gorilla]
Length = 381
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 179/281 (63%), Gaps = 13/281 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 48 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 107
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKNF D V+IP +A+LSKE GVEK
Sbjct: 108 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEK 167
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 168 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 220
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 221 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 278
Query: 249 ELLDWFHVVMKKGEPDYGY----YRYDLRYDPVMPLKLFIN 285
L+ + V + + YR+ R + P + +I
Sbjct: 279 HLVKYIFAVAHRLFLPFPLPLFAYRWVARVFEISPFEPWIT 319
>gi|189049|gb|AAA36350.1| NADH dehydrogenase (ubiquinone), partial [Homo sapiens]
Length = 375
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/252 (51%), Positives = 169/252 (67%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 42 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 101
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKNF D V+IP +A+LSKE GVEK
Sbjct: 102 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEK 161
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 162 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNS 214
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 215 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 272
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 273 HLVKYIFAVAHR 284
>gi|6681764|ref|NP_004993.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial precursor [Homo sapiens]
gi|2833280|sp|Q16795.2|NDUA9_HUMAN RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
gi|5326823|gb|AAD42055.1|AF050641_1 NADH-ubiquinone oxidoreductase 39kDa subunit [Homo sapiens]
gi|14424566|gb|AAH09311.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Homo
sapiens]
gi|16198380|gb|AAH15837.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Homo
sapiens]
gi|84798786|gb|AAI11547.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Homo
sapiens]
gi|119609243|gb|EAW88837.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa,
isoform CRA_a [Homo sapiens]
gi|312150544|gb|ADQ31784.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
[synthetic construct]
Length = 377
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/252 (51%), Positives = 169/252 (67%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKNF D V+IP +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 274
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 275 HLVKYIFAVAHR 286
>gi|431892126|gb|ELK02573.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Pteropus alecto]
Length = 377
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/256 (49%), Positives = 174/256 (67%), Gaps = 11/256 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQIIIP+R YD+ LR GDL
Sbjct: 41 IPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQIIIPHRCERYDIMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F ++ RN D IR+A+++SNVVINL+GR++ TKN+ D V+IP +A++SKE G
Sbjct: 101 GQIIFLEWNGRNKDSIRRAVEHSNVVINLVGRDWETKNYDFEDVFVKIPQAIAQVSKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEK IH+S LNAD I S++ R K GEKEV FPEATI PSD++G D+F
Sbjct: 161 VEKLIHVSHLNAD-------IKSSSRYLRNKAVGEKEVRNAFPEATIIMPSDIFGREDRF 213
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L Y+ ++ W F + + G +T+KQPVYV DV+ I+ A K+PDA GK + VGP R
Sbjct: 214 LNYFANIRW---FGGVPLISLGMKTVKQPVYVVDVSKGIINAIKEPDARGKSFAFVGPNR 270
Query: 245 YLLSELLDWFHVVMKK 260
YLL +L+ + V +
Sbjct: 271 YLLYDLVQYAFAVAHR 286
>gi|13097156|gb|AAH03351.1| Similar to NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9
(39kD), partial [Homo sapiens]
Length = 338
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/252 (51%), Positives = 169/252 (67%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 5 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 64
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKNF D V+IP +A+LSKE GVEK
Sbjct: 65 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEK 124
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 125 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNS 177
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 178 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 235
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 236 HLVKYIFAVAHR 247
>gi|291392701|ref|XP_002712902.1| PREDICTED: NADH dehydrogenase-like [Oryctolagus cuniculus]
Length = 377
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/256 (49%), Positives = 175/256 (68%), Gaps = 11/256 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDL
Sbjct: 41 IPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F ++ R+ D IR+A+++SNVVINL+GRE+ T+NF D V+IP +A++SKE G
Sbjct: 101 GQIIFLEWNGRDKDSIRRAVQHSNVVINLVGREWETRNFDFEDVFVKIPQAIAQVSKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIH+S LNAD I S++ R K GEK V FPEATI +PSD++G D+F
Sbjct: 161 VEKFIHVSHLNAD-------IKSSSRYLRNKAVGEKAVRDVFPEATIIKPSDIFGREDRF 213
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L ++ ++ W F + + G++T+KQPVYV DV+ IV A KD DA GK + GP R
Sbjct: 214 LNHFANIRW---FGGVPLISLGKKTVKQPVYVVDVSKGIVNAVKDADARGKTFVFTGPNR 270
Query: 245 YLLSELLDWFHVVMKK 260
Y L +L+ + + V +
Sbjct: 271 YSLFDLVQYIYAVAHR 286
>gi|119609244|gb|EAW88838.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa,
isoform CRA_b [Homo sapiens]
Length = 399
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/255 (50%), Positives = 170/255 (66%), Gaps = 9/255 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDL
Sbjct: 63 MPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDL 122
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+LF + R+ D IR+ +++SNVVINLIGR++ TKNF D V+IP +A+LSKE G
Sbjct: 123 GQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAG 182
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+F
Sbjct: 183 VEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRF 235
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L + M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RY
Sbjct: 236 LNSFASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRY 293
Query: 246 LLSELLDWFHVVMKK 260
LL L+ + V +
Sbjct: 294 LLFHLVKYIFAVAHR 308
>gi|111662268|gb|ABH12231.1| mitochondrial complex I subunit NDUFA9 [Pongo pygmaeus]
Length = 381
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 168/252 (66%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 48 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQL 107
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ T+NF D V+IP +A+LSKE GVEK
Sbjct: 108 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETRNFDFEDVFVKIPQAIAQLSKEAGVEK 167
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 168 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 220
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 221 FASM--HRFGPTPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPNRYLLF 278
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 279 HLVKYIFAVAHR 290
>gi|197098884|ref|NP_001127602.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial precursor [Pongo abelii]
gi|269969371|sp|P0CB81.1|NDUA9_PONAB RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
gi|269969372|sp|P0CB82.1|NDUA9_PONPY RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
gi|55732390|emb|CAH92896.1| hypothetical protein [Pongo abelii]
Length = 377
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 168/252 (66%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ T+NF D V+IP +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETRNFDFEDVFVKIPQAIAQLSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FASM--HRFGPTPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPNRYLLF 274
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 275 HLVKYIFAVAHR 286
>gi|403282417|ref|XP_003932646.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Saimiri boliviensis
boliviensis]
Length = 377
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/266 (48%), Positives = 177/266 (66%), Gaps = 9/266 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSSF+G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSFSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+A+++SNVVINLIGR++ TK F AD V+IP +A+ SKE GVEK
Sbjct: 104 LFMEWDSRDKDSIRRAVQHSNVVINLIGRDWETKYFDYADVYVKIPQAIAQASKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNAD + S++ R K GE V FPEA I +PSD++G D+FL +
Sbjct: 164 FIHVSHLNAD-------VRSSSKYMRNKAVGEAVVREAFPEAIIIKPSDIFGREDRFLNH 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ ++ R F + + G +T+KQPVYV DV+ I+ A KDP +GK + VGP RYLL
Sbjct: 217 FSNIRR--FIGVPLVSLGWKTVKQPVYVSDVSKGIINAVKDPHVSGKTFVFVGPNRYLLF 274
Query: 249 ELLDWFHVVMKKGEPDYGYYRYDLRY 274
+L+ + + V + Y R+ R+
Sbjct: 275 DLVKYVYSVTHRLFLPYPIPRFAYRW 300
>gi|17556106|ref|NP_497675.1| Protein Y53G8AL.2 [Caenorhabditis elegans]
gi|373220127|emb|CCD72292.1| Protein Y53G8AL.2 [Caenorhabditis elegans]
Length = 431
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/253 (51%), Positives = 166/253 (65%), Gaps = 1/253 (0%)
Query: 4 VHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG 63
+KG GGR+SF+G V TVFGASG++G + NK K GSQIIIPYR + Y +R+ ++ G
Sbjct: 45 AQFRKGAGGRASFSGNVVTVFGASGFLGLPVVNKFAKNGSQIIIPYRQDPYYMREHKVLG 104
Query: 64 DLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKE 123
+LGQVL+ P+ +++ IRKA+KYSNVVINLIG T + D N RLAR+ KE
Sbjct: 105 ELGQVLYFPFELMDEESIRKAVKYSNVVINLIGTRVPTGKYNYYDVNDTGARRLARICKE 164
Query: 124 MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGD 183
MGVEKF+H+SAL A P + SQF +K GE V EFPEATI RPS +YG D
Sbjct: 165 MGVEKFVHLSALGATTQPQKGHFVAKSQFLHSKGLGEVAVREEFPEATIIRPSVIYGELD 224
Query: 184 KFLRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F++YY WR + +YKKGEET K P++VGDVAA I +A DP A G Y+ VGP
Sbjct: 225 GFIQYYVSRWRKTPLDYVYLYKKGEETYKMPIWVGDVAAGIQSAVNDPTAKGHTYEFVGP 284
Query: 243 KRYLLSELLDWFH 255
Y LSEL+D+ +
Sbjct: 285 HCYQLSELIDFMY 297
>gi|440904291|gb|ELR54825.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial, partial [Bos grunniens mutus]
Length = 363
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/256 (48%), Positives = 175/256 (68%), Gaps = 11/256 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+P+R YD LR GDL
Sbjct: 24 IPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGDL 83
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F ++ R+ D IR+A+++S+VVINL+GRE+ T+NF D V+IP +A++SKE G
Sbjct: 84 GQIIFMDWNGRDKDSIRRAVEHSSVVINLVGREWETQNFDFEDVFVKIPQAIAQVSKEAG 143
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEK IHIS LNAD I S++ R+K GEKEV FPEATI +P++++G D+F
Sbjct: 144 VEKLIHISHLNAD-------IKSSSKYLRSKAVGEKEVRETFPEATIIKPAEIFGREDRF 196
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L Y+ ++ W F + + G++T+KQPVY+ DV I+ A KDPDA GK + VGP R
Sbjct: 197 LNYFANIRW---FGGVPLISLGKKTVKQPVYIVDVTKGIINAIKDPDARGKTFAFVGPSR 253
Query: 245 YLLSELLDWFHVVMKK 260
YLL +L+ + V +
Sbjct: 254 YLLFDLVQYVFAVAHR 269
>gi|410350877|gb|JAA42042.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Pan
troglodytes]
Length = 377
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 169/252 (67%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKN+ D V+IP +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRQVVQHSNVVINLIGRDWETKNYDFEDVFVKIPQAIAQLSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 274
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 275 HLVKYIFAVAHR 286
>gi|120952151|ref|NP_001073383.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial precursor [Pan troglodytes]
gi|115502294|sp|Q0MQB4.1|NDUA9_PANTR RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
gi|111662264|gb|ABH12229.1| mitochondrial complex I subunit NDUFA9 [Pan troglodytes]
gi|410256262|gb|JAA16098.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Pan
troglodytes]
gi|410292422|gb|JAA24811.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Pan
troglodytes]
Length = 377
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 169/252 (67%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKN+ D V+IP +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNYDFEDVFVKIPQAIAQLSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 274
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 275 HLVKYIFAVAHR 286
>gi|57529307|ref|NP_001006281.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Gallus gallus]
gi|53136628|emb|CAG32643.1| hypothetical protein RCJMB04_31o2 [Gallus gallus]
Length = 378
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/250 (49%), Positives = 174/250 (69%), Gaps = 11/250 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GRSS +G+VATVFGA+G++G Y+ N+LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 45 GRTGRSSVSGIVATVFGATGFLGRYVVNRLGRIGSQVIIPYRCDQYDLMYLRPMGDLGQL 104
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + ++ D R+A+++SNVVINL+G+E+ TKNF+ D V IP +A++++E GVE
Sbjct: 105 LFLEWDCKDKDSTRRAVEHSNVVINLVGKEWETKNFSFEDEFVNIPKSIAQITREAGVET 164
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
IHIS LNA P+ Y+ R+K GEK V EFP+A I +PS+M+G D+FL +
Sbjct: 165 LIHISHLNASMKSPSKYL-------RSKAVGEKAVREEFPDAVIMKPSEMFGREDRFLNH 217
Query: 189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
Y +M W F + + G++T+KQPVYV DVA AI+ A KDPDA GK Y VGP RYLL
Sbjct: 218 YANMRW---FGGVPLISLGKKTVKQPVYVVDVAKAIINAVKDPDAKGKTYALVGPNRYLL 274
Query: 248 SELLDWFHVV 257
+++++ + V
Sbjct: 275 YDMIEYIYAV 284
>gi|268564181|ref|XP_002647109.1| Hypothetical protein CBG20301 [Caenorhabditis briggsae]
Length = 428
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/266 (48%), Positives = 174/266 (65%), Gaps = 6/266 (2%)
Query: 5 HLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD 64
+KG GGR+SF+G V TVFGASG++G + NK K GSQIIIPYR + Y +R+ ++ G+
Sbjct: 46 QFRKGNGGRASFSGNVVTVFGASGFLGLPVVNKFAKNGSQIIIPYRQDPYYMREHKVLGE 105
Query: 65 LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM 124
LGQVL+ P+ ++++ IRK +KYSNVV+NLIG T N+ D + RLA++ KEM
Sbjct: 106 LGQVLYFPFELKDEESIRKVVKYSNVVVNLIGTRVPTGNYNYYDVHDTGARRLAKICKEM 165
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
GVEKF+H+SAL A +PP + S+F R+K GE V EFPEATI RPS +YG D
Sbjct: 166 GVEKFVHLSALGATVDPPKGHFVAKSEFLRSKALGEIAVREEFPEATIIRPSVIYGELDG 225
Query: 185 FLRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
F++YY WR + +YKKGE+T K P++VGDVA I DP A G Y+ VGP
Sbjct: 226 FIQYYVSRWRKTPLDHVYLYKKGEQTYKMPIWVGDVAQGIDRVVNDPTAKGHTYEFVGPH 285
Query: 244 RYLLSELLDWFHVVMKKGE--PDYGY 267
Y LSEL+D+ + KK PD+G+
Sbjct: 286 CYQLSELIDFMY---KKAHCLPDFGF 308
>gi|397499393|ref|XP_003820438.1| PREDICTED: probable polypeptide N-acetylgalactosaminyltransferase 8
[Pan paniscus]
Length = 854
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 169/252 (67%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKN+ D V+IP +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNYDFEDVFVKIPQAIAQLSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 274
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 275 HLVKYIFAVAHR 286
>gi|441670681|ref|XP_003273859.2| PREDICTED: probable polypeptide N-acetylgalactosaminyltransferase 8
[Nomascus leucogenys]
Length = 722
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 177/281 (62%), Gaps = 13/281 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+V TVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVTTVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKNF D V+IP +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVEHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSKYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FASM--HRFGPTPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPNRYLLF 274
Query: 249 ELLDWFHVVMKKGEPDYGY----YRYDLRYDPVMPLKLFIN 285
L+ + V + + YR+ R + P + +I
Sbjct: 275 HLVKYIFAVAHRLFLPFPLPLFAYRWVARVFEISPFEPWIT 315
>gi|402884841|ref|XP_003905881.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 14-like
[Papio anubis]
Length = 671
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 126/252 (50%), Positives = 168/252 (66%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRIGSQVIIPYRCDIYDTMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+A+++SNVVINLIGR++ TKNF D V+IP +A++SKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRAVEHSNVVINLIGRDWETKNFDFEDVYVKIPQAIAQVSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKAVRDAFPEAIIIKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ H+ + V + + T+KQPVYV DV+ IV KDPDA+GK + VGP RYLL
Sbjct: 217 FAHLRQFVL--IPIGSLSWTTVKQPVYVVDVSKGIVNIVKDPDASGKTFAFVGPNRYLLF 274
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 275 HLVKYVFAVAHR 286
>gi|157423514|gb|AAI53423.1| Ndufa9 protein [Danio rerio]
Length = 380
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 119/253 (47%), Positives = 176/253 (69%), Gaps = 8/253 (3%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+G GGRSS +G+ ATVFGA+G++G Y+ N+LG+ GSQ++IPYR + YD+ LR GDLGQ
Sbjct: 45 RGKGGRSSISGLAATVFGATGFLGRYVVNRLGRMGSQVVIPYRCDQYDLMYLRPMGDLGQ 104
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
++F + PRN + I++AI +SNVVINL+GRE+ T N+ D V IP ++AR ++E G++
Sbjct: 105 IIFMEWDPRNKESIQRAISHSNVVINLVGREWETSNYKYEDVFVSIPLQIARATREAGIK 164
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
KFIH+S LNAD P+ Y+ R K GE+ V EFP+A I +PS+++G D+FL
Sbjct: 165 KFIHMSHLNADIRSPSKYL-------RNKAVGEEAVRNEFPDAIIMKPSELFGREDRFLN 217
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
++ +M R + + G++T+KQPV+V DVA AI+ A +DP+A GK Y VGP RYLL
Sbjct: 218 HFANM-RWFGTAVPLIAMGKKTVKQPVHVVDVAKAIINAIQDPEANGKTYALVGPNRYLL 276
Query: 248 SELLDWFHVVMKK 260
+L+++ + V +
Sbjct: 277 HDLVEYLYSVAHR 289
>gi|326912578|ref|XP_003202626.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Meleagris gallopavo]
Length = 399
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 188/297 (63%), Gaps = 21/297 (7%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GRSS +G+VATVFGA+G++G Y+ N+LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 66 GRSGRSSVSGIVATVFGATGFLGRYVVNRLGRIGSQVIIPYRCDQYDLMYLRQMGDLGQL 125
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + ++ D R+A+++SNVVINLIG+E+ TKNF+ D V IP +A++++E GVE
Sbjct: 126 LFLEWDCKDKDSTRRAVEHSNVVINLIGKEWETKNFSFEDEFVNIPKSIAQITREAGVET 185
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
IHIS LNA P+ Y+ R+K GEK V EFP+A I +PS+M+G D+FL +
Sbjct: 186 LIHISHLNASMKSPSKYL-------RSKAVGEKAVREEFPDAIIMKPSEMFGREDRFLNH 238
Query: 189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
Y +M W F + + G++T+KQPVYV DVA AI+ A KDPDA GK Y GP RYLL
Sbjct: 239 YANMRW---FGGVPLISLGKKTMKQPVYVVDVAKAIINAVKDPDAKGKTYALAGPNRYLL 295
Query: 248 SELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMG-HLTPERVER 303
+++++ + V YR Y PL I F P LT ++V+R
Sbjct: 296 YDMIEYIYAVA---------YRTFFPYPLPRPLYHLIARFFEMSPFEPWLTRDKVDR 343
>gi|198278533|ref|NP_001094222.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Rattus norvegicus]
gi|317373396|sp|Q5BK63.2|NDUA9_RAT RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; AltName: Full=Sperm
flagella protein 3; Flags: Precursor
gi|149049372|gb|EDM01826.1| rCG30092 [Rattus norvegicus]
gi|197246398|gb|AAI68777.1| Ndufa9 protein [Rattus norvegicus]
Length = 377
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/246 (50%), Positives = 165/246 (67%), Gaps = 11/246 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD LRL GDLGQ+
Sbjct: 44 GKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDIYDTMHLRLMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+F + R+ D IRKA+++SNVVINLIGRE+ T+NF D V IP +A+ SKE GVE+
Sbjct: 104 IFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAGVER 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA + ++ R+K GEKEV FP+A I RPSDM+G D+FL +
Sbjct: 164 FIHVSHLNAS-------MKSSAKSLRSKAVGEKEVRTVFPDAIIIRPSDMFGREDRFLNH 216
Query: 189 YG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + W F + + G +T+KQPVYV DV+ I A K+PDA GK + GP RYLL
Sbjct: 217 FANYRW---FLAVPLVSLGFKTVKQPVYVADVSKGIANATKNPDAIGKTFAFTGPNRYLL 273
Query: 248 SELLDW 253
L+ +
Sbjct: 274 FHLVKY 279
>gi|158255570|dbj|BAF83756.1| unnamed protein product [Homo sapiens]
Length = 377
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 178/281 (63%), Gaps = 13/281 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKNF V+IP +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEGVFVKIPQAIAQLSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 274
Query: 249 ELLDWFHVVMKKGEPDYGY----YRYDLRYDPVMPLKLFIN 285
L+ + V + + YR+ R + P + +I
Sbjct: 275 HLVKYIFAVAHRLFLPFPLPLFAYRWVARVFEISPFEPWIT 315
>gi|343958910|dbj|BAK63310.1| NADH dehydrogenase [Pan troglodytes]
Length = 284
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 168/252 (66%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR YD+ LR GDLGQ+
Sbjct: 4 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCGKYDIMHLRPMGDLGQL 63
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKN+ D V+IP +A+LSKE GVEK
Sbjct: 64 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNYDFEDVFVKIPQAIAQLSKEAGVEK 123
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 124 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 176
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 177 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 234
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 235 HLVKYIFAVAHR 246
>gi|46249713|gb|AAH68378.1| Ndufa9 protein, partial [Danio rerio]
Length = 374
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/253 (47%), Positives = 176/253 (69%), Gaps = 8/253 (3%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+G GGRSS +G+ ATVFGA+G++G Y+ N+LG+ GSQ++IPYR + YD+ LR GDLGQ
Sbjct: 39 RGKGGRSSISGLAATVFGATGFLGRYVVNRLGRMGSQVVIPYRCDQYDLMYLRPMGDLGQ 98
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
++F + PRN + I++AI +SNVVINL+GRE+ T N+ D V IP ++AR ++E G++
Sbjct: 99 IIFMEWDPRNKESIQRAISHSNVVINLVGREWETSNYKYEDVFVSIPLQIARATREAGIK 158
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
KFIH+S LNAD P+ Y+ R K GE+ V EFP+A I +PS+++G D+FL
Sbjct: 159 KFIHMSHLNADIRSPSKYL-------RNKAVGEEAVRNEFPDAIIMKPSELFGREDRFLN 211
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
++ +M R + + G++T+KQPV+V DVA AI+ A +DP+A GK Y VGP RYLL
Sbjct: 212 HFANM-RWFGTAVPLIAMGKKTVKQPVHVVDVAKAIINAIQDPEANGKTYALVGPNRYLL 270
Query: 248 SELLDWFHVVMKK 260
+L+++ + V +
Sbjct: 271 HDLVEYLYSVAHR 283
>gi|60688426|gb|AAH91192.1| Ndufa9 protein, partial [Rattus norvegicus]
Length = 370
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/247 (50%), Positives = 165/247 (66%), Gaps = 11/247 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD LRL GDLGQ+
Sbjct: 37 GKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDIYDTMHLRLMGDLGQL 96
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+F + R+ D IRKA+++SNVVINLIGRE+ T+NF D V IP +A+ SKE GVE+
Sbjct: 97 IFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAGVER 156
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA + ++ R+K GEKEV FP+A I RPSDM+G D+FL +
Sbjct: 157 FIHVSHLNAS-------MKSSAKSLRSKAVGEKEVRTVFPDAIIIRPSDMFGREDRFLNH 209
Query: 189 YG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + W F + + G +T+KQPVYV DV+ I A K+PDA GK + GP RYLL
Sbjct: 210 FANYRW---FLAVPLVSLGFKTVKQPVYVADVSKGIANATKNPDAIGKTFAFTGPNRYLL 266
Query: 248 SELLDWF 254
L+ +
Sbjct: 267 FHLVKYI 273
>gi|387915632|gb|AFK11425.1| Ndufa9 protein [Callorhinchus milii]
Length = 380
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/256 (48%), Positives = 174/256 (67%), Gaps = 8/256 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ +G GGRSSF+G+VATVFGA+G++G Y+ N+LG+ GSQI+IPYR + YD L+ GDL
Sbjct: 43 IPRGKGGRSSFSGIVATVFGATGFLGRYVVNRLGRIGSQIVIPYRCDPYDTMHLKPMGDL 102
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+ + R+ D IR+A++ SNVVINL+GRE+ T N+ D N+ IP ++A ++E G
Sbjct: 103 GQITLLHWDARDKDSIRRAVENSNVVINLVGREWETWNYKFEDVNINIPRQIALAAREAG 162
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIHIS LNA+ I S+ RTK GE+ V EFP+A I +PS+++G D+F
Sbjct: 163 VEKFIHISHLNAN-------IKSISKLLRTKAVGEQVVREEFPDAVILKPSELFGREDRF 215
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L Y+ +M R + + G++T+KQPVYV DVA AIV+A K+ DA GK Y VGP RY
Sbjct: 216 LNYFANM-RWFGAAVPLIGMGKKTVKQPVYVVDVAKAIVSAIKEADANGKSYAIVGPNRY 274
Query: 246 LLSELLDWFHVVMKKG 261
LL +L+++ V +
Sbjct: 275 LLHDLVEYVFAVAHRS 290
>gi|308474703|ref|XP_003099572.1| hypothetical protein CRE_29071 [Caenorhabditis remanei]
gi|308266584|gb|EFP10537.1| hypothetical protein CRE_29071 [Caenorhabditis remanei]
Length = 430
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/266 (48%), Positives = 174/266 (65%), Gaps = 6/266 (2%)
Query: 5 HLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD 64
+KG GGR+SF+G V TVFGASG++G + NK K GSQIIIPYR + Y +R+ ++ G+
Sbjct: 48 QFRKGAGGRASFSGNVVTVFGASGFLGLPVVNKFAKNGSQIIIPYRQDPYYMREHKVLGE 107
Query: 65 LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM 124
LGQVL+ P+ ++++ IRK +KYSNVV+NLIG T N+ D + RLA++ KEM
Sbjct: 108 LGQVLYFPFELKDEESIRKVVKYSNVVVNLIGTRVPTGNYNYYDVHDTGARRLAKICKEM 167
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
GVEKF+H+SAL A +PP + S+F R+K GE V EFP+ATI RPS +YG D
Sbjct: 168 GVEKFVHLSALGATVDPPKGHFVAKSEFLRSKALGEIAVREEFPDATIIRPSVIYGELDG 227
Query: 185 FLRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
F++YY WR + +YKKGE+T K P++VGDVA I DP A G Y+ VGP
Sbjct: 228 FIQYYVSRWRKTPLDHVYLYKKGEQTYKMPIWVGDVAQGIDRVVNDPTAKGHTYEFVGPH 287
Query: 244 RYLLSELLDWFHVVMKKGE--PDYGY 267
Y LSEL+D+ + KK PD+G+
Sbjct: 288 CYQLSELIDFMY---KKAHCLPDFGF 310
>gi|166158023|ref|NP_001107421.1| uncharacterized protein LOC100135261 [Xenopus (Silurana)
tropicalis]
gi|156229986|gb|AAI52140.1| Ndufa9 protein [Danio rerio]
gi|163916162|gb|AAI57548.1| LOC100135261 protein [Xenopus (Silurana) tropicalis]
Length = 380
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/253 (47%), Positives = 176/253 (69%), Gaps = 8/253 (3%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+G GGRSS +G+ ATVFGA+G++G Y+ N+LG+ GSQ++IPYR + YD+ LR GDLGQ
Sbjct: 45 RGKGGRSSISGLAATVFGATGFLGRYVVNRLGRMGSQVVIPYRCDQYDLMYLRPMGDLGQ 104
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
++F + PRN + I++AI +SNVVINL+GRE+ T N+ D V IP ++AR ++E G++
Sbjct: 105 IIFMEWDPRNKESIQRAISHSNVVINLVGREWETSNYKYEDVFVSIPLQIARPTREAGIK 164
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
KFIH+S LNAD I S++ R K GE+ V EFP+A I +PS+++G D+FL
Sbjct: 165 KFIHMSHLNAD-------IRSPSKYLRNKAVGEEAVRNEFPDAIIMKPSELFGREDRFLN 217
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
++ +M R + + G++T+KQPV+V DVA AI+ A +DP+A GK Y VGP RYLL
Sbjct: 218 HFANM-RWFGTAVPLIAMGKKTVKQPVHVVDVAKAIINAIQDPEANGKTYALVGPNRYLL 276
Query: 248 SELLDWFHVVMKK 260
+L+++ + V +
Sbjct: 277 HDLVEYLYSVAHR 289
>gi|354467247|ref|XP_003496081.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Cricetulus griseus]
gi|344242401|gb|EGV98504.1| hypothetical protein I79_001369 [Cricetulus griseus]
Length = 377
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/249 (50%), Positives = 169/249 (67%), Gaps = 11/249 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD LR GDL
Sbjct: 41 IPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDTMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F + R+ D IR+A+++SNVVINLIGR++ T+NF D V+IP +A+ SKE G
Sbjct: 101 GQLIFLEWDARDKDSIRRAVQHSNVVINLIGRDWETRNFDFEDIFVKIPQAIAQASKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+ IH+S LNA + S++ R K GEKEV R FPEATI RPSD++G D+F
Sbjct: 161 VERLIHVSHLNAS-------MKSSSRYLRNKAVGEKEVRRLFPEATIIRPSDIFGREDRF 213
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L ++ ++ W F + + G +T+KQPVYV DV+ I+ A KDPDA GK + GP R
Sbjct: 214 LNHFANIRW---FIGVPLISLGFKTVKQPVYVVDVSKGIINAVKDPDARGKTFAFAGPNR 270
Query: 245 YLLSELLDW 253
YLL L+ +
Sbjct: 271 YLLFHLVQY 279
>gi|395847626|ref|XP_003796469.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Otolemur garnettii]
Length = 377
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/269 (47%), Positives = 176/269 (65%), Gaps = 9/269 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD LR GDL
Sbjct: 41 IPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDFMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F ++ R+ D IR+A+++SNVVINLIGR++ TKNF D V+IP +A++SKE G
Sbjct: 101 GQLIFLEWNGRDKDSIRRAVEHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQVSKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIH+S LNA+ I S++ R K GEKEV FPEA I +PSD++G D+F
Sbjct: 161 VEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRF 213
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L ++ +M F + + G + KQPVYV DV+ I+ A KDPDA GK + GP RY
Sbjct: 214 LNHFANM--RSFIGVPLISLGLKIEKQPVYVVDVSKGIINAVKDPDAKGKSFAFFGPNRY 271
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRY 274
L +L+ + + V + Y R+ R+
Sbjct: 272 FLFDLVQYIYAVAHRPFLPYPLPRFAYRW 300
>gi|170576755|ref|XP_001893752.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, mitochondrial
precursor [Brugia malayi]
gi|158600051|gb|EDP37408.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, mitochondrial
precursor, putative [Brugia malayi]
Length = 427
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/252 (49%), Positives = 169/252 (67%), Gaps = 2/252 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+KGTGGR SF+G V TVFG +G +G L N+L K+G QII+P R + Y R LR+ G+L
Sbjct: 46 FRKGTGGRCSFSGNVVTVFGCTGLLGRLLINRLAKEGHQIILPSRQDPYYTRQLRVHGEL 105
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVL P+ ++++ IR+AI+YSNVV+NLIG + TKN++ + +VE R+AR++KEMG
Sbjct: 106 GQVLLLPFQLKDEESIRQAIRYSNVVVNLIGARYETKNYSFEETHVEGARRIARIAKEMG 165
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG-DK 184
++KFIH+SA+NA N P + SQF RTK GE+ V EFP ATI RP MYG D
Sbjct: 166 IQKFIHMSAMNASKNTPPTLFNKPSQFLRTKGLGEEVVREEFPNATIIRPGMMYGGNYDA 225
Query: 185 FLRYYGHMWRHVFRKLA-VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
F+ Y+ + R R L VY+KGE T K P++VGDV+ + DP A GK Y+ VGP
Sbjct: 226 FINYFLAIQRIPHRSLIFVYRKGEHTYKMPIWVGDVSKGVERTIVDPHAIGKTYEFVGPH 285
Query: 244 RYLLSELLDWFH 255
Y LSEL+D+ +
Sbjct: 286 CYKLSELIDYMY 297
>gi|344277791|ref|XP_003410681.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Loxodonta africana]
Length = 380
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 126/254 (49%), Positives = 170/254 (66%), Gaps = 11/254 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 47 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDLMYLRPMGDLGQI 106
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+F ++ R+ D IR+A+++SNVVINL+G+++ T+NF D V+IP +A++SKE GVE+
Sbjct: 107 IFLEWNGRDKDSIRRAVEHSNVVINLVGQDWETRNFDFEDVFVKIPQAIAQVSKEAGVER 166
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
IH+S LNAD I S++ R K GEKEV FPEATI +PSD++G D+FL Y
Sbjct: 167 LIHVSHLNAD-------IKSSSRYLRNKAVGEKEVRDTFPEATIIKPSDIFGREDRFLNY 219
Query: 189 Y-GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ G W F + + G KQPVYV DVA IV A KDPDA GK + GP RYLL
Sbjct: 220 FAGGRW---FGGMPLVFLGLRAEKQPVYVVDVAKGIVNAIKDPDACGKTFAFTGPNRYLL 276
Query: 248 SELLDWFHVVMKKG 261
+L+ + V +
Sbjct: 277 LDLVQYVFAVTHRS 290
>gi|318037573|ref|NP_001187320.1| mitochondrial NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
subunit 9 [Ictalurus punctatus]
gi|308322709|gb|ADO28492.1| mitochondrial NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
subunit 9 [Ictalurus punctatus]
Length = 380
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 174/255 (68%), Gaps = 8/255 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ KG GGRSSF+GV ATVFGA+G++G Y+ N+LG+ GSQI+IP+R + YD+ LR GDL
Sbjct: 43 IPKGKGGRSSFSGVAATVFGATGFLGRYVVNRLGRIGSQIVIPHRCDQYDLMYLRPMGDL 102
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F + ++ + I++AI +SNVVINL+GRE+ T N+ D V IP ++A+ S+E G
Sbjct: 103 GQIIFMEWDVKDKESIKRAISHSNVVINLVGREWETSNYKYEDVFVTIPQQIAKASREAG 162
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V KFIH+S LNAD P+ Y+ R K GE V EFP+A I +PS+++G D+F
Sbjct: 163 VSKFIHVSHLNADIRSPSKYL-------RNKAVGETVVRDEFPDAIIMKPSELFGREDRF 215
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
++ +M R + + + G++T+KQP +V DVA AIV A KDPDA GK Y VGP RY
Sbjct: 216 FNHFANM-RWFGKAIPLIAMGKKTVKQPCHVVDVAKAIVNAIKDPDANGKTYALVGPNRY 274
Query: 246 LLSELLDWFHVVMKK 260
LL +L+++ + V +
Sbjct: 275 LLHDLVEYVYAVAHR 289
>gi|449282261|gb|EMC89125.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Columba livia]
Length = 370
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/250 (48%), Positives = 173/250 (69%), Gaps = 11/250 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GRSS +G+VATVFGA+G++G Y+ N+LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 37 GRSGRSSVSGIVATVFGATGFLGRYVVNRLGRIGSQVIIPYRCDRYDLMYLRPMGDLGQL 96
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + ++ D IR+A+++SNVVINL+G+E+ TKNF D V IP +A++++E GVE
Sbjct: 97 LFLEWDCKDKDTIRRALEHSNVVINLVGKEWETKNFKYEDVFVNIPQNIAQIAREAGVET 156
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
IHIS LNA P+ Y+ R+K GE+ V +FP+A I +PS+MYG D+FL +
Sbjct: 157 LIHISHLNASMKSPSKYL-------RSKAVGERAVREKFPDAIILKPSEMYGREDRFLNH 209
Query: 189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
Y +M W F + + G++T+KQP+YV DVA AI+ A KDPDA GK Y GP RYLL
Sbjct: 210 YANMRW---FGGVPLISLGKKTVKQPIYVVDVAKAIINAIKDPDAKGKTYALAGPNRYLL 266
Query: 248 SELLDWFHVV 257
+++++ + V
Sbjct: 267 YDIVEYIYSV 276
>gi|156365559|ref|XP_001626712.1| predicted protein [Nematostella vectensis]
gi|156213599|gb|EDO34612.1| predicted protein [Nematostella vectensis]
Length = 372
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/253 (47%), Positives = 173/253 (68%), Gaps = 8/253 (3%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
KKGTGGRSSFNGV ATVFGA+G++G Y+ N+LG+ G+Q+ +PYRG+ +D+R LRL GDLG
Sbjct: 34 KKGTGGRSSFNGVSATVFGATGFLGRYVINRLGRVGTQLTVPYRGDEHDIRHLRLMGDLG 93
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV 126
Q+ F +H ++++ I K +K+SNVV+NLIGR F T+NF + +V+ +A+ +KE GV
Sbjct: 94 QIDFFDFHLKDEESIAKMVKHSNVVVNLIGRGFETRNFNFEEVHVDGARTIAKAAKEAGV 153
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
E+ IH+SALNA + P S+F TK GE+ V EFP ATI RP ++G DKFL
Sbjct: 154 ERLIHVSALNAAVDSP-------SKFLHTKALGEQAVREEFPNATILRPGTVFGHEDKFL 206
Query: 187 RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
YY ++ R + + + + G T K PVYV DVA +I+ A K+ + G+ ++ VGP Y
Sbjct: 207 NYYAYL-RSLPLGIPLIEGGMNTKKMPVYVADVAQSILEAIKEEASVGQTFELVGPSEYY 265
Query: 247 LSELLDWFHVVMK 259
L +++D+ + VMK
Sbjct: 266 LYDIIDYIYRVMK 278
>gi|393911229|gb|EJD76220.1| hypothetical protein LOAG_16787 [Loa loa]
Length = 427
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/252 (48%), Positives = 167/252 (66%), Gaps = 2/252 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+KGTGGR SF+G V TVFG +G +G L N+L K+G QII+P R Y R L++ G+L
Sbjct: 46 FRKGTGGRCSFSGNVVTVFGCTGLLGKLLINRLAKEGHQIILPSRQEPYYTRQLKIYGEL 105
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVL P+ ++++ IR+A++YSNVV+NLIG TKN++ + +VE R+AR++KEMG
Sbjct: 106 GQVLLLPFQLKDEESIRQAMRYSNVVVNLIGTRCETKNYSFEETHVEGARRIARIAKEMG 165
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG-DK 184
++KFIH+SA+NA N P + SQF TK GE+ V EFP AT+ RPS MYG D
Sbjct: 166 IQKFIHMSAMNASKNTPPTLFNKPSQFLLTKGLGEEVVREEFPSATVLRPSMMYGGNYDA 225
Query: 185 FLRYYGHMWRHVFRKLA-VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
F+ Y+ + R R + VYKKGE T K P++VGDV+ + DP A GK Y+ VGP
Sbjct: 226 FINYFLAIQRIPHRSVIYVYKKGEHTYKMPIWVGDVSKGVERTIVDPHAVGKTYEFVGPH 285
Query: 244 RYLLSELLDWFH 255
Y LSEL+D+ +
Sbjct: 286 CYKLSELIDYMY 297
>gi|254692859|ref|NP_079634.2| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial precursor [Mus musculus]
gi|341941159|sp|Q9DC69.2|NDUA9_MOUSE RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
gi|37231685|gb|AAH58378.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 [Mus
musculus]
gi|148667428|gb|EDK99844.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 [Mus
musculus]
Length = 377
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 128/249 (51%), Positives = 167/249 (67%), Gaps = 11/249 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LRL GDL
Sbjct: 41 IPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDVYDIMHLRLMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+ F + R+ D IRKA+++SNVVINLIGRE+ T+NF D V IP +A+ SKE G
Sbjct: 101 GQLTFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+S LNA + S+ R+K GEKEV FPEA I RPSD++G D+F
Sbjct: 161 VERFIHVSHLNA-------SMKSSSKSLRSKAVGEKEVRSVFPEAIIIRPSDIFGREDRF 213
Query: 186 LRYYG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L ++ + W F + + G +T+KQPVYV DV+ IV A KDPDA GK + GP R
Sbjct: 214 LNHFANYRW---FLAVPLVSLGFKTVKQPVYVADVSKGIVNATKDPDAVGKTFAFTGPNR 270
Query: 245 YLLSELLDW 253
YLL L+ +
Sbjct: 271 YLLFHLVKY 279
>gi|13543186|gb|AAH05760.1| Ndufa9 protein, partial [Mus musculus]
Length = 348
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/247 (50%), Positives = 163/247 (65%), Gaps = 11/247 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LRL GDL
Sbjct: 12 IPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDVYDIMHLRLMGDL 71
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+ F + R+ D IRKA+++SNVVINLIGRE+ T+NF D V IP +A+ SKE G
Sbjct: 72 GQLTFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAG 131
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+S LNA + + + GEKEV FPEA I RPSD++G D+F
Sbjct: 132 VERFIHVSHLNASMKSSSKSLRSKA-------VGEKEVRSVFPEAIIIRPSDIFGREDRF 184
Query: 186 LRYYG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L ++ + W F + + G +T+KQPVYV DV+ IV A KDPDA GK + GP R
Sbjct: 185 LNHFANYRW---FLAVPLVSLGFKTVKQPVYVADVSKGIVNATKDPDAVGKTFAFTGPNR 241
Query: 245 YLLSELL 251
YLL L+
Sbjct: 242 YLLFHLV 248
>gi|58332714|ref|NP_001011432.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 [Xenopus
(Silurana) tropicalis]
gi|56971758|gb|AAH88072.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
[Xenopus (Silurana) tropicalis]
Length = 377
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/253 (49%), Positives = 171/253 (67%), Gaps = 11/253 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GRS+ +GVVATVFGASG++G Y+ N+LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKPGRSAVSGVVATVFGASGFLGRYVVNRLGRIGSQVIIPYRCDPYDIMYLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+F + ++ D IRKA++ SNVVINLIG+E+ TKNF+ D V IP LA L++E GVEK
Sbjct: 104 IFMDWDSKDKDTIRKALQNSNVVINLIGKEWETKNFSYEDVFVNIPRDLALLAREAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNAD P+ Y+ R K GE V FP+A I +PS++YG D+F +
Sbjct: 164 FIHMSHLNADLKSPSKYL-------RNKAVGEDAVREAFPDAIIMKPSEIYGREDRFFNH 216
Query: 189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
Y +M W F + + G++++KQPVYV DVA AI+ A DP++ GK Y VGP RYLL
Sbjct: 217 YANMRW---FGGVPLIAFGKKSVKQPVYVVDVAKAILNAIHDPESKGKTYALVGPNRYLL 273
Query: 248 SELLDWFHVVMKK 260
+L+++ V +
Sbjct: 274 HDLVEYIFAVTHR 286
>gi|308322229|gb|ADO28252.1| mitochondrial NADH dehydrogenase 1 alpha subcomplex subunit 9
[Ictalurus furcatus]
Length = 380
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 172/255 (67%), Gaps = 8/255 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ KG GGRSSF+GV ATVFGA+G++G Y+ N+LG+ GSQI+IP+R + YD+ LR GDL
Sbjct: 43 IPKGKGGRSSFSGVAATVFGATGFLGRYVVNRLGRIGSQIVIPHRCDQYDLMYLRPMGDL 102
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F + ++ + I++AI +SNVVINL+GRE+ T N+ D V IP ++A+ S+E G
Sbjct: 103 GQIIFMEWDVKDKESIKRAIAHSNVVINLVGREWETSNYKYEDVFVTIPQQIAKASREAG 162
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V KFIH+S NAD I S++ R K GE V EFP+A I +PS+++G D+F
Sbjct: 163 VSKFIHVSHPNAD-------IRSPSKYLRNKAVGETVVRDEFPDAIIMKPSELFGREDRF 215
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
++ +M R + + G++T+KQP +V DVA AIV A KDPDA GK Y VGP RY
Sbjct: 216 FNHFANM-RWFGKATPLIAMGKKTVKQPCHVVDVAKAIVNAIKDPDANGKTYALVGPNRY 274
Query: 246 LLSELLDWFHVVMKK 260
LL +L+++ + V +
Sbjct: 275 LLHDLVEYVYAVAHR 289
>gi|148230575|ref|NP_001082699.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
[Xenopus laevis]
gi|32484269|gb|AAH54183.1| MGC64316 protein [Xenopus laevis]
Length = 377
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/253 (49%), Positives = 170/253 (67%), Gaps = 11/253 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GRS+ +GVVATVFGA+G++G YL N+LG+ GSQ++IPYR YD+ LR GDLGQ+
Sbjct: 44 GKPGRSANSGVVATVFGATGFLGRYLVNRLGRVGSQVVIPYRCEPYDIMYLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+F ++ ++ D IRKA++ SNVVINLIG+E+ TKNF+ D V IP LA L++E GVEK
Sbjct: 104 IFMDWNAKDKDTIRKALENSNVVINLIGKEWETKNFSYEDVFVNIPRDLALLAREAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNAD P+ Y+ R K GE V FP+A I +PS+MYG D+F +
Sbjct: 164 FIHMSHLNADLKSPSKYL-------RNKAVGEAAVREAFPDAIIMKPSEMYGREDRFFNH 216
Query: 189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
Y +M W F + + G++T+KQPVYV DVA AI+ A DP++ GK Y GP RYLL
Sbjct: 217 YANMRW---FGGVPLIAFGKKTVKQPVYVVDVAKAILNAIHDPESNGKTYALAGPNRYLL 273
Query: 248 SELLDWFHVVMKK 260
+L+++ V +
Sbjct: 274 HDLVEYVFAVAHR 286
>gi|28278769|gb|AAH45076.1| MGC64316 protein, partial [Xenopus laevis]
Length = 380
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 180/282 (63%), Gaps = 15/282 (5%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GRS+ +GVVATVFGA+G++G YL N+LG+ GSQ++IPYR YD+ LR GDLGQ+
Sbjct: 47 GKPGRSANSGVVATVFGATGFLGRYLVNRLGRVGSQVVIPYRCEPYDIMYLRPMGDLGQL 106
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+F ++ ++ D IRKA++ SNVVINLIG+E+ TKNF+ D V IP LA L++E GVEK
Sbjct: 107 IFMDWNAKDKDTIRKALENSNVVINLIGKEWETKNFSYEDVFVNIPRDLALLAREAGVEK 166
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNAD P+ Y+ R K GE V FP+A I +PS+MYG D+F +
Sbjct: 167 FIHMSHLNADLKSPSKYL-------RNKAVGEAAVREAFPDAIIMKPSEMYGREDRFFNH 219
Query: 189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
Y +M W F + + G++T+KQPVYV DVA AI+ A DP++ GK Y GP RYLL
Sbjct: 220 YANMRW---FGGVPLIAFGKKTVKQPVYVVDVAKAILNAIHDPESNGKTYALAGPNRYLL 276
Query: 248 SELLDWFHVVMKKGEPDY----GYYRYDLRYDPVMPLKLFIN 285
+L+++ V + Y YR R+ + P + +I
Sbjct: 277 HDLVEYVFAVAHRPFVPYPIPRPLYRLIARFFEINPFEPWIT 318
>gi|334348210|ref|XP_001372251.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Monodelphis domestica]
Length = 377
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/253 (46%), Positives = 167/253 (66%), Gaps = 11/253 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+PYR YD LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCEPYDFTYLRPMGDLGQI 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+F ++ ++ I++A+++SNVVINL+GR++ T+NF D +IP +A+L+KE GVE
Sbjct: 104 IFLEWNSKDKSSIQRALEHSNVVINLVGRDWETRNFDFTDVFADIPESIAQLAKEAGVET 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNAD I S++ R K GEK V FPEA I +P+D++G D+ L Y
Sbjct: 164 FIHVSHLNAD-------IKSTSKYLRNKAVGEKAVREAFPEAIILKPADIFGREDRLLNY 216
Query: 189 YG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + W F + + G++T+KQPVYV DV+ AIV A KDPD+ GK Y GP RYLL
Sbjct: 217 FANNRW---FGGVPLISMGKKTVKQPVYVVDVSRAIVNAIKDPDSRGKTYAITGPNRYLL 273
Query: 248 SELLDWFHVVMKK 260
+ + + V +
Sbjct: 274 HDFVQYIFAVSHR 286
>gi|12833615|dbj|BAB22596.1| unnamed protein product [Mus musculus]
Length = 377
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/249 (51%), Positives = 166/249 (66%), Gaps = 11/249 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LRL GD
Sbjct: 41 IPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDVYDIMHLRLMGDP 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+ F + R+ D IRKA+++SNVVINLIGRE+ T+NF D V IP +A+ SKE G
Sbjct: 101 GQLTFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+S LNA + S+ R+K GEKEV FPEA I RPSD++G D+F
Sbjct: 161 VERFIHVSHLNA-------SMKSSSKSLRSKAVGEKEVRSVFPEAIIIRPSDIFGREDRF 213
Query: 186 LRYYG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L ++ + W F + + G +T+KQPVYV DV+ IV A KDPDA GK + GP R
Sbjct: 214 LNHFANYRW---FLAVPLVSLGFKTVKQPVYVADVSKGIVNATKDPDAVGKTFAFTGPNR 270
Query: 245 YLLSELLDW 253
YLL L+ +
Sbjct: 271 YLLFHLVKY 279
>gi|426371295|ref|XP_004065497.1| PREDICTED: LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1
alpha subcomplex subunit 9, mitochondrial [Gorilla
gorilla gorilla]
Length = 424
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 133/288 (46%), Positives = 179/288 (62%), Gaps = 20/288 (6%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 84 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 143
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTI-------ADANVEIPARLARLS 121
LF + R+ D IR+ +++SNVVINLIGR++ TK +I D V+IP +A+LS
Sbjct: 144 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKTXSILDFXFDFEDVFVKIPQAIAQLS 203
Query: 122 KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGS 181
KE GVEKFIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G
Sbjct: 204 KEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGR 256
Query: 182 GDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
D+FL + M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VG
Sbjct: 257 EDRFLNSFASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVG 314
Query: 242 PKRYLLSELLDWFHVVMKKGEPDYGY----YRYDLRYDPVMPLKLFIN 285
P RYLL L+ + V + + YR+ R + P + +I
Sbjct: 315 PSRYLLFHLVKYIFAVAHRLFLPFPLPLFAYRWVARVFEISPFEPWIT 362
>gi|432862508|ref|XP_004069890.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Oryzias latipes]
Length = 381
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 125/285 (43%), Positives = 180/285 (63%), Gaps = 16/285 (5%)
Query: 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
+ ATVFGA+G++G Y+ N+LG+ GSQIIIP+R + YD+ R GDLGQ++F + +N
Sbjct: 57 ISATVFGATGFLGRYVVNRLGRMGSQIIIPHRCDQYDLMYFRPMGDLGQIIFLEWDSKNK 116
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
D I++A+++SNVVINL+GRE+ T+NF+ D V IP +LAR +KE G+ KFIH+S LNAD
Sbjct: 117 DSIKRALEHSNVVINLVGREWETRNFSFQDVFVTIPQQLARATKEAGISKFIHLSHLNAD 176
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P+ Y+ R K GE+ V EFP+A I +PS+M+G D+F Y+ +M R
Sbjct: 177 IRSPSKYL-------RNKAVGEQVVREEFPDAIIMKPSEMFGREDRFFNYFANM-RWFGN 228
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
+ + G++T+KQPVYV DV AI+ A +DPDA GK + VGP RYLL +L+++ + V
Sbjct: 229 AIPLMALGKKTVKQPVYVADVGKAIINAARDPDANGKTFALVGPNRYLLHDLVEYIYAVA 288
Query: 259 KKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVER 303
+ Y R P+ L L P P TP++V+R
Sbjct: 289 HRPFVPYPLPR------PLYHLAAQFFALNPFEPWT--TPDKVDR 325
>gi|297261596|ref|XP_001118102.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Macaca mulatta]
Length = 460
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/249 (49%), Positives = 163/249 (65%), Gaps = 15/249 (6%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIP+R + YD LR GDLGQ+
Sbjct: 87 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRIGSQVIIPHRCDIYDTMHLRPMGDLGQL 146
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+A+++SNVVINLIGR++ TKNF D V+IP +A++SKE GVEK
Sbjct: 147 LFLEWDARDKDSIRRAVEHSNVVINLIGRDWETKNFDFDDVYVKIPQAIAQVSKEAGVEK 206
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 207 FIHVSHLNAN-------IKSSSRYLRNKAVGEKAVRDAFPEAIIIKPSDIFGREDRFLNS 259
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ H+ + V L T+KQPVYV DV+ IV KDPDA+GK + VG R+ +
Sbjct: 260 FAHLRQFVLTPLGSL--SWTTVKQPVYVVDVSKGIVNIVKDPDASGKTFAFVGXNRHTV- 316
Query: 249 ELLDWFHVV 257
FH V
Sbjct: 317 -----FHTV 320
>gi|61806490|ref|NP_001013477.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 [Danio rerio]
gi|60552256|gb|AAH91545.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 [Danio rerio]
gi|182891204|gb|AAI64086.1| Ndufa9 protein [Danio rerio]
Length = 309
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 165/237 (69%), Gaps = 8/237 (3%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+G GGRSS +G+ ATVFGA+G++G Y+ N+LG+ GSQ++IPYR + YD+ LR GDLGQ
Sbjct: 45 RGKGGRSSISGLAATVFGATGFLGRYVVNRLGRMGSQVVIPYRCDQYDLMYLRPMGDLGQ 104
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
++F + PRN + I++AI +SNVVINL+GRE+ T N+ D V IP ++AR ++E G++
Sbjct: 105 IIFMEWDPRNKESIQRAISHSNVVINLVGREWETSNYKYEDVFVSIPLQIARATREAGIK 164
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
KFIH+S LNAD P+ Y+ R K GE+ V EFP+A I +PS+++G D+FL
Sbjct: 165 KFIHMSHLNADIRSPSKYL-------RNKAVGEEAVRNEFPDAIIMKPSELFGREDRFLN 217
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
++ +M R + + G++T+KQPV+V DVA AI+ A +DP+A GK Y VGP R
Sbjct: 218 HFANM-RWFGTAVPLIAMGKKTVKQPVHVVDVAKAIINAIQDPEANGKTYALVGPNR 273
>gi|395538753|ref|XP_003771339.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Sarcophilus harrisii]
Length = 377
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/253 (46%), Positives = 168/253 (66%), Gaps = 11/253 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+PYR YD LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCEPYDFTYLRPMGDLGQI 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+F ++ ++ I++A+++SNVVINL+GR++ TKNF +D IP +A+L+K GVE
Sbjct: 104 IFLEWNAKDKSSIQRALEHSNVVINLVGRDWETKNFDFSDVFAVIPETIAQLAKNAGVET 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNAD I S++ R K G+K V FPEA I +PSD++G D+ L +
Sbjct: 164 FIHVSHLNAD-------IKSTSRYLRNKAVGDKAVREVFPEAIIMKPSDIFGREDRLLNH 216
Query: 189 YGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++ W F + + G++T+KQPVYV DV+ AI+ A KDPDA GK Y GP RYLL
Sbjct: 217 FANIRW---FGGVPLISLGKKTVKQPVYVVDVSKAIINAIKDPDAQGKTYALTGPNRYLL 273
Query: 248 SELLDWFHVVMKK 260
+L+ + V +
Sbjct: 274 YDLVQYIFAVAHR 286
>gi|296211141|ref|XP_002752283.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Callithrix jacchus]
Length = 289
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 160/233 (68%), Gaps = 9/233 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSSF+GVVATVFGA+G++G Y+ N LG+ GSQ++IPYR + YD+ LR GDLGQ+
Sbjct: 66 GKGGRSSFSGVVATVFGATGFLGRYIVNHLGRMGSQVVIPYRCDKYDIMHLRPMGDLGQL 125
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R D IR+A+++SNVVINLIGR++ TK+F AD +IP +A++SKE GV K
Sbjct: 126 LFMEWDSREKDSIRRAVQHSNVVINLIGRDWETKHFDFADVYAKIPQAIAQVSKEAGVGK 185
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNAD + S++ R K GE V FPEA I +PSD++G D+FL +
Sbjct: 186 FIHVSHLNAD-------MKSSSKYLRNKAVGETVVREAFPEAIIIKPSDIFGREDRFLNH 238
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
+ +M R F + + G +T+KQPVYV DV+ I+ A KDP A+GK + VG
Sbjct: 239 FSNMRR--FGPIPLVSLGWKTVKQPVYVSDVSKGIMNAIKDPHASGKTFAFVG 289
>gi|126303361|ref|XP_001379499.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Monodelphis domestica]
Length = 377
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 167/256 (65%), Gaps = 11/256 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSSF+G+VATVFGA+G++G Y+ + LG+ GSQ+IIPYR YD+ L+ GDL
Sbjct: 41 IPHGKGGRSSFSGIVATVFGATGFLGRYVVSHLGRIGSQVIIPYRCEPYDITYLKPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F ++ + I++A+++SNVVINLIGR++ T NF +D IP +ARL+KE G
Sbjct: 101 GQLIFLEWNAKIRSSIQRALEHSNVVINLIGRDWETNNFDFSDVFATIPQSIARLAKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE FIH+S LNAD + S++ R K GE V EFPEA I +PSD++G D+
Sbjct: 161 VETFIHVSHLNAD-------LRSTSKYLRNKAVGEIAVKDEFPEAIILKPSDIFGREDRL 213
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L Y+ ++ W F + + G T+KQPVYV DV+ AI+ A KDP A GK Y GP R
Sbjct: 214 LNYFANIRW---FGGVPLISLGRNTVKQPVYVVDVSKAIINAIKDPGARGKTYAITGPHR 270
Query: 245 YLLSELLDWFHVVMKK 260
YLL +L+ + V +
Sbjct: 271 YLLCDLVQYIFAVAHR 286
>gi|209732928|gb|ACI67333.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Salmo salar]
gi|223647086|gb|ACN10301.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Salmo salar]
gi|223672959|gb|ACN12661.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Salmo salar]
Length = 380
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 178/286 (62%), Gaps = 18/286 (6%)
Query: 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V ATVFGA+G++G Y+ N+LG+ GSQI+IP+R + YD+ LR GDLGQ++F + RN
Sbjct: 56 VAATVFGATGFLGRYVVNRLGRMGSQIVIPHRCDQYDLMYLRPMGDLGQIIFMEWDARNK 115
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
D IR+A+ +SNVVINL+GRE+ TKN+ D V IP ++A+ ++E G+ K IH+S LNAD
Sbjct: 116 DSIREALAHSNVVINLVGREWETKNYPFEDTYVSIPQQIAKATREAGITKLIHVSHLNAD 175
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
I S++ R K GEK V EFP+A I +P++M+G D+F ++ +M R
Sbjct: 176 -------IRSPSKYLRNKAVGEKAVREEFPDAIIMKPAEMFGREDRFFNHFANM-RWFGS 227
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
+ + G++T+KQPV+V DVA AI+ A KDPDA GK Y VGP RYLL +L+++ + V
Sbjct: 228 AVPLISMGKKTVKQPVHVVDVAKAIINAIKDPDANGKTYALVGPNRYLLHDLVEYVYAVA 287
Query: 259 KKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMG-HLTPERVER 303
+ Y R PL + F P TP++V+R
Sbjct: 288 HRPFVPYPLPR---------PLYHLVASFFAMNPFEPWTTPDKVDR 324
>gi|195997701|ref|XP_002108719.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190589495|gb|EDV29517.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 358
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 167/246 (67%), Gaps = 8/246 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K G GGRSS++G++ATVFG +G+ G Y+ N+LG+ G+QI++PYR + +D+R +RL GDL
Sbjct: 37 VKSGRGGRSSYSGILATVFGGTGFTGRYVINRLGRVGTQIMVPYRCDEHDIRHIRLMGDL 96
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F+P+ R+ D + + +K+SNVVINLIG+++ T+N+T DANVE +AR ++ G
Sbjct: 97 GQIMFRPFSLRDTDAVSELVKHSNVVINLIGQDWETRNYTYEDANVEGARAIARACRDHG 156
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+ IH+SALN D N ++++ R+K GE+ VL EFP+ATI RPSD+YG D+F
Sbjct: 157 VERLIHVSALNVDKNSKSHWL-------RSKAAGEEAVLEEFPDATIVRPSDIYGQEDRF 209
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
YY + R + + + G + K P+YV D A AI D AG+IY+ GP Y
Sbjct: 210 FNYYAEL-RMLPFGVPLLDGGLKATKIPLYVADFAKAIAKMTVDDTTAGRIYELYGPHEY 268
Query: 246 LLSELL 251
LL +L+
Sbjct: 269 LLYDLV 274
>gi|47221864|emb|CAF98876.1| unnamed protein product [Tetraodon nigroviridis]
Length = 380
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 180/286 (62%), Gaps = 18/286 (6%)
Query: 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
+ ATVFGA+G++G Y+ N+LG+ GSQ++IP+R + YD+ LR GDLGQ++F + RN
Sbjct: 57 IAATVFGATGFLGRYVVNRLGRIGSQVVIPHRCDQYDIMYLRPMGDLGQIIFMEWDARNQ 116
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
D I++A+++S+VVINL+GRE+ T+N+ D V IP ++A+ ++E G KF+HIS LNAD
Sbjct: 117 DSIKRALEHSDVVINLVGREWETRNYGFEDVFVTIPQKIAKAAREAGTTKFVHISHLNAD 176
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM-WRHVF 197
P+ Y+ R K GE V EFP+A I +PS+M+G D+F +Y +M W
Sbjct: 177 IRSPSKYL-------RNKAVGETAVRDEFPDAIIMKPSEMFGREDRFFNHYANMSW--FG 227
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
+ + G++T+KQPVYV DVA AI++A +DPDA GK Y VGP RYLL +L+++ + V
Sbjct: 228 NAIPLIAMGKKTVKQPVYVVDVAKAIISAIRDPDANGKTYALVGPNRYLLHDLVEYIYAV 287
Query: 258 MKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVER 303
+ Y R P+ L + P P TP++VER
Sbjct: 288 AHRSFVAYPLPR------PLYRLAAQFFAMNPFEPWT--TPDKVER 325
>gi|355563907|gb|EHH20407.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Macaca mulatta]
gi|355785824|gb|EHH66007.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Macaca fascicularis]
Length = 377
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 159/239 (66%), Gaps = 9/239 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIP+R + YD LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRIGSQVIIPHRCDIYDTMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+A+++SNVVINLIGR++ TKNF D V+IP +A++SKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRAVEHSNVVINLIGRDWETKNFDFDDVYVKIPQAIAQVSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I + D++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKAVRDAFPEAIIIKLLDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ H+ + V L T+KQPVYV DV+ IV KDPDA+GK + VG +YLL
Sbjct: 217 FAHLRQFVLTPLG--SLSWTTVKQPVYVVDVSKGIVNIVKDPDASGKTFAFVGFIKYLL 273
>gi|229366480|gb|ACQ58220.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Anoplopoma fimbria]
Length = 381
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 163/242 (67%), Gaps = 8/242 (3%)
Query: 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
+ ATVFGA+G++G Y+ N+LG+ GSQI++P+R + YD+ LR GDLGQ++F + RN
Sbjct: 57 IAATVFGATGFIGRYVVNRLGRMGSQIVVPHRCDQYDIMYLRPMGDLGQIIFMDWDARNK 116
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
D I++A++ SNVVINL+GRE+ T N+ D V IP ++A+ ++E G+ KF+H+S LNAD
Sbjct: 117 DSIKRALENSNVVINLVGREWETSNYHYEDVFVTIPQQIAKAAREAGITKFVHMSHLNAD 176
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
I S++ R K GE V EFPEA I +PS+++G D+F YY +M R
Sbjct: 177 -------IRSQSKYLRNKAVGETAVRDEFPEAIIMKPSEIFGREDRFFNYYANM-RWFGN 228
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
+ + G++T+KQPV+V DVA AI+ A +DPDA GK Y VGP RYLL +L+++ + V
Sbjct: 229 AVPLISMGKKTVKQPVHVVDVAKAIINAVRDPDANGKTYALVGPNRYLLHDLVEYIYAVA 288
Query: 259 KK 260
+
Sbjct: 289 HR 290
>gi|410907479|ref|XP_003967219.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Takifugu rubripes]
Length = 382
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/287 (41%), Positives = 181/287 (63%), Gaps = 20/287 (6%)
Query: 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
+ ATVFGA+G++G Y+ N+LG+ GSQ+++P+R + YD+ LR GDLGQ++F + +N
Sbjct: 58 IAATVFGATGFLGRYVVNRLGRVGSQVVLPHRCDQYDIMYLRPMGDLGQIIFMEWDAKNK 117
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
D I++A+++S+VVINL+GRE+ T+N+ D V IP ++A+ ++E G+ KF+HIS LNAD
Sbjct: 118 DSIKRALEHSDVVINLVGREWETRNYGFEDVFVTIPQQIAKAAREAGITKFVHISHLNAD 177
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM-WRHVF 197
P+ Y+ R K GE V EFP+A I +PS+M+G D+F +Y +M W
Sbjct: 178 IRSPSKYL-------RNKAVGETAVRDEFPDAIIMKPSEMFGREDRFFNHYANMSW--FG 228
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
+ + G++T+KQPV V DVA AI+ A +DPDA GK Y VGP RYLL +L+++ + V
Sbjct: 229 NAIPLISMGKKTVKQPVCVVDVAKAIINAIRDPDANGKTYALVGPNRYLLYDLVEYIYTV 288
Query: 258 MKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMG-HLTPERVER 303
+R L Y PL + +F P +TP++VER
Sbjct: 289 A---------HRPFLAYPLPRPLYRLVAQVFAMNPFEPWITPDKVER 326
>gi|115899579|ref|XP_786784.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Strongylocentrotus
purpuratus]
Length = 378
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 167/253 (66%), Gaps = 9/253 (3%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
KG GGRSSF+G+VA VFG +G++G Y+ N+LG++GSQ+++P+R + Y V+ ++L GDLGQ
Sbjct: 45 KGRGGRSSFSGIVAAVFGGNGFLGKYIVNRLGREGSQVVVPHRCDEYYVQPMKLMGDLGQ 104
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
++F+ Y+ R D IR + VV+NL+ +++ T++FT D N+E P LA++ KE GV
Sbjct: 105 IMFRQYNLRQHDLIRDIVGNCTVVVNLLSKDYETRHFTFEDINIEAPRNLAKICKEAGVP 164
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+ IH+SAL AD P ++F RTK GE+ V EFPEA I RP+ M+G D+F
Sbjct: 165 RLIHVSALGADMASP-------AKFLRTKAAGERVVREEFPEAVIVRPAQMFGREDRFFN 217
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
++ + + F + ++ +K+PVYV DVA AI++ + +A GK Y+ GP YLL
Sbjct: 218 HFAN--QRFFGGVPLFPSARRVVKRPVYVSDVAQAIMSIINEKEADGKTYELAGPNGYLL 275
Query: 248 SELLDWFHVVMKK 260
++L+D+ + V ++
Sbjct: 276 TDLVDFIYRVTRR 288
>gi|442755023|gb|JAA69671.1| Putative nadh:ubiquinone oxidoreductase ndufa9/39kda subunit
[Ixodes ricinus]
Length = 292
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 153/211 (72%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L+KGTGGRSSFNGVV TVFG++G +G+ L N+LGK G+Q+I+PYR FY ++ L+LCGDL
Sbjct: 53 LRKGTGGRSSFNGVVCTVFGSNGTLGTSLINRLGKIGTQLILPYRCEFYFMQRLKLCGDL 112
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+ FQP++ +++ I KA+KYSNVVINLIG++ T NF ++ +V+ +AR+++E G
Sbjct: 113 GQIHFQPFNLKDELSIAKAMKYSNVVINLIGKDNETSNFPFSEVHVKGAQTIARIARESG 172
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V+K IH SALNA +P GGS+FY +K+ GE+ V EFP+A IFRP+DMY D+F
Sbjct: 173 VQKLIHFSALNATESPRPIIKFGGSKFYASKWLGEQVVREEFPDAIIFRPADMYCHEDRF 232
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYV 216
+RYY R + + ++ KG +KQPV+
Sbjct: 233 IRYYVSHIRRNYVLMPLWNKGNGIVKQPVFA 263
>gi|149566548|ref|XP_001515711.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like, partial [Ornithorhynchus
anatinus]
Length = 360
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/269 (44%), Positives = 164/269 (60%), Gaps = 9/269 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ++IPYR YD+ LR GDL
Sbjct: 24 MPHGQGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVVIPYRCEPYDIMHLRPMGDL 83
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+LF ++ R+ + IR+A+ +SNVVINLIGR++ TKNF D V+IP +A+L+KE G
Sbjct: 84 GQLLFMEWNARDKESIRRALAHSNVVINLIGRDWETKNFDFDDVFVKIPQSIAQLAKEAG 143
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIH+S LNAD + S++ R K GEK V FP A I +PSD++G D+F
Sbjct: 144 VEKFIHVSHLNAD-------MKSSSRYLRNKAVGEKVVREAFPGAVILKPSDIFGREDRF 196
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L Y+ + F + T + V DV+ AIV A KDP GK + GP RY
Sbjct: 197 LNYFAN--NRWFGGIXXXXXXXXTPNRFPQVVDVSKAIVNAIKDPSTQGKTFVIAGPNRY 254
Query: 246 LLSELLDWFHVVMKKGEPDYGYYRYDLRY 274
L +L+ + V + Y R+ R+
Sbjct: 255 QLFDLVQYVFAVAHRVFLPYPMPRFAYRW 283
>gi|241813409|ref|XP_002416494.1| NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit, putative
[Ixodes scapularis]
gi|215510958|gb|EEC20411.1| NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit, putative
[Ixodes scapularis]
Length = 370
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 152/211 (72%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L+KGTGGRSSFNGVV TVFG++G +G+ L N+LGK G+Q+I+PYR FY ++ L+LCGDL
Sbjct: 53 LRKGTGGRSSFNGVVCTVFGSNGSLGTSLINRLGKIGTQLILPYRCEFYFMQRLKLCGDL 112
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+ FQP++ +++ I KA+KYSNVVINLIG++ T NF ++ +V+ +AR+++E G
Sbjct: 113 GQIHFQPFNLKDELSIAKAMKYSNVVINLIGKDTETSNFPFSEVHVKGAQTIARIARESG 172
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V+K IH SALNA +P GGS+FY +K+ GE+ V EFP+A IFRP+DMY D+F
Sbjct: 173 VQKLIHFSALNATESPRPIIKFGGSKFYASKWLGEQVVREEFPDAIIFRPADMYSHEDRF 232
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYV 216
+RYY R + + ++ KG +KQP +
Sbjct: 233 IRYYVSHIRRNYVLMPLWIKGNGIVKQPFFA 263
>gi|226468254|emb|CAX69804.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Schistosoma
japonicum]
Length = 266
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 156/215 (72%), Gaps = 9/215 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LK+GTGGR+SFNG+V TVFGA+GY+G L L K G+QII+PYR + + +R +++ GDL
Sbjct: 41 LKRGTGGRASFNGMVVTVFGATGYLGRVLMTHLAKTGTQIIVPYRCDPHMIRGMKVVGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+LF PY+ ++D+ +RKA+KYS+VVINLIG EF T+NFTI + +++ R+A++SKE+G
Sbjct: 101 GQILFLPYNLKDDECLRKAMKYSDVVINLIGTEFDTRNFTIEEVHIDAACRIAKISKEIG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+ +H+SAL + NP Y+ S+F +K GE+EVLRE P+ATIFRP++++G D+F
Sbjct: 161 VEQLVHVSALCQNKNPQK-YVRKPSRFMISKAIGEEEVLRERPDATIFRPAEIWGPLDRF 219
Query: 186 LRYYGHMWRH------VFRKLAVYKKGEETIKQPV 214
L Y+ R VF L Y GE TIKQPV
Sbjct: 220 LCYFASKPRRHNGIQTVFVPLWSY--GEHTIKQPV 252
>gi|256090820|ref|XP_002581379.1| NADH-ubiquinone oxidoreductase [Schistosoma mansoni]
gi|238667248|emb|CAZ37618.1| NADH-ubiquinone oxidoreductase 39 kD subunit,putative [Schistosoma
mansoni]
Length = 325
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/273 (41%), Positives = 178/273 (65%), Gaps = 14/273 (5%)
Query: 37 KLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96
+L K G+QII+PYR + + +RD+++ GDLGQVLF P+ ++D+ +RKA+KYS+VVINL G
Sbjct: 3 QLAKTGTQIILPYRCDPHMIRDVKVIGDLGQVLFLPFDLKDDESLRKAMKYSDVVINLTG 62
Query: 97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156
E T+NFTI +++ +R+AR+SKE+GV++ +H+SAL + NPP Y+ S+F +K
Sbjct: 63 TESDTRNFTIEHVHIDAASRIARISKELGVQQLVHVSALCQNKNPPK-YVRKHSRFMVSK 121
Query: 157 YQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR----KLAVYKKGEETIKQ 212
GE+EVLRE P+ATIFRP++++G D+FL Y+ R R + ++ G+ T+KQ
Sbjct: 122 AIGEEEVLRERPDATIFRPAEIWGPHDRFLCYFASRPRRFTRLQSVHIPLWASGKNTVKQ 181
Query: 213 PVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDL 272
PV V D+A IV + +P++ G+IY+AVGP RY L +++ W + + + Y ++
Sbjct: 182 PVCVHDLACGIVNSLHNPESLGQIYEAVGPHRYRLDDMVKWIYFLCR-------YLPSEV 234
Query: 273 RYDPVMPLKLFINGLFPGYPMGH--LTPERVER 303
P+ PL L ++ H LT ER+ER
Sbjct: 235 YITPMSPLFLARTYIYEKVAPVHSYLTFERLER 267
>gi|256090822|ref|XP_002581380.1| NADH-ubiquinone oxidoreductase [Schistosoma mansoni]
gi|238667249|emb|CAZ37619.1| NADH-ubiquinone oxidoreductase 39 kD subunit,putative [Schistosoma
mansoni]
Length = 244
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 160/227 (70%), Gaps = 5/227 (2%)
Query: 37 KLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96
+L K G+QII+PYR + + +RD+++ GDLGQVLF P+ ++D+ +RKA+KYS+VVINL G
Sbjct: 3 QLAKTGTQIILPYRCDPHMIRDVKVIGDLGQVLFLPFDLKDDESLRKAMKYSDVVINLTG 62
Query: 97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156
E T+NFTI +++ +R+AR+SKE+GV++ +H+SAL + NPP Y+ S+F +K
Sbjct: 63 TESDTRNFTIEHVHIDAASRIARISKELGVQQLVHVSALCQNKNPPK-YVRKHSRFMVSK 121
Query: 157 YQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR----KLAVYKKGEETIKQ 212
GE+EVLRE P+ATIFRP++++G D+FL Y+ R R + ++ G+ T+KQ
Sbjct: 122 AIGEEEVLRERPDATIFRPAEIWGPHDRFLCYFASRPRRFTRLQSVHIPLWASGKNTVKQ 181
Query: 213 PVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
PV V D+A IV + +P++ G+IY+AVGP RY L +++ W + + +
Sbjct: 182 PVCVHDLACGIVNSLHNPESLGQIYEAVGPHRYRLDDMVKWIYFLCR 228
>gi|405958984|gb|EKC25062.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Crassostrea gigas]
Length = 333
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 158/234 (67%), Gaps = 14/234 (5%)
Query: 30 MGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP----YHPRNDDEIRKAI 85
MG ++ N+LG+ GSQ+IIPYRG+ + + LRLCGDLGQ+LF P YH +D++RKA+
Sbjct: 1 MGRHIVNRLGRIGSQVIIPYRGDTFRLERLRLCGDLGQILFTPMDSIYH---EDQMRKAM 57
Query: 86 KYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYY 145
+SNVVINLIG+E+ + ++ D V+ PA +AR++KEMGVE+FIH S LNADPNPP
Sbjct: 58 MHSNVVINLIGKEYESDSYDFHDLYVDAPANIARIAKEMGVERFIHFSHLNADPNPPELI 117
Query: 146 ISG-----GSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK-FLRY-YGHMWRHVFR 198
G G+ + K++G++ V FPEA IFRP+D+YG D F +Y Y + +
Sbjct: 118 YFGTDLPRGNSSLKKKWEGDQLVREIFPEAIIFRPADIYGIKDWYFFKYIYHRRYSKIRH 177
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ ++++G +T+KQPV+ DVAA ++ A D DA G Y VGP+RY L+ ++D
Sbjct: 178 AIPIWREGMDTVKQPVWSSDVAAGVLNAVFDTDAPGNTYYCVGPERYCLNNMVD 231
>gi|260792074|ref|XP_002591052.1| hypothetical protein BRAFLDRAFT_119073 [Branchiostoma floridae]
gi|229276252|gb|EEN47063.1| hypothetical protein BRAFLDRAFT_119073 [Branchiostoma floridae]
Length = 479
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 157/232 (67%), Gaps = 9/232 (3%)
Query: 39 GKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98
G+ GSQI++P+R ++Y+ LR GDLGQ++F R+ + RK +K+SNVVIN+IGR+
Sbjct: 178 GRDGSQIVVPHRCDWYNTLYLRPMGDLGQIVFSELDERDPESYRKMLKHSNVVINMIGRD 237
Query: 99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ 158
+ T+NF + N+++ +A+L KE GVE+ IH+S+LNADPN P S+ YRTK++
Sbjct: 238 WETRNFKFEEVNIDLARTIAQLCKEEGVERLIHVSSLNADPNSP-------SKLYRTKFE 290
Query: 159 GEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD 218
GE+ V FP+ATI RP+ M+G D+FL YY ++ F + + +G +TI+QPVYVGD
Sbjct: 291 GEEAVKEAFPDATILRPAQMFGREDRFLNYYANL--RAFGGVPLISRGRKTIRQPVYVGD 348
Query: 219 VAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRY 270
VA AI+ A K+ DA GK ++ VGP RY L +++++ + VM + Y Y ++
Sbjct: 349 VATAIINAAKERDAKGKTFELVGPNRYYLYDMVEYIYRVMHRTPFIYPYPKF 400
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 44/57 (77%)
Query: 5 HLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL 61
H +G GGRSSF+G+ ATVFG +G++G Y+ NKLG+ GSQI++P+R ++Y+ RL
Sbjct: 41 HTPRGRGGRSSFSGICATVFGGTGFLGRYVINKLGRDGSQIVVPHRCDWYNTLYHRL 97
>gi|226530543|ref|NP_001149069.1| LOC100282690 [Zea mays]
gi|195624488|gb|ACG34074.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Zea mays]
Length = 407
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 114/257 (44%), Positives = 166/257 (64%), Gaps = 11/257 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G+VATVFGA+G++G YL +L K GSQ+++P+RG R L++ GDL
Sbjct: 62 VRKGTGGRSSVSGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGCEDSPRHLKIMGDL 121
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ YHPR+ D I+ + SNVVINLIGRE+ T+N++ + N +P +LA ++KE
Sbjct: 122 GQIVPMKYHPRDVDSIKAVMAKSNVVINLIGREYETRNYSFEEVNHHMPEQLATIAKEHG 181
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S L A P S S+ RTK GE+ V +EFPEATI RP+ M G+ D+
Sbjct: 182 GIIRFIQVSCLGASP-------SSESRMLRTKAAGEQSVFKEFPEATIMRPATMIGTEDR 234
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + ++ + L + G I QPVYV DVAAAIV + KD + GKIY+ GP+
Sbjct: 235 ILNRWAQFAKN-WGFLPLVGGGSTKI-QPVYVIDVAAAIVNSLKDDGTSMGKIYELEGPE 292
Query: 244 RYLLSELLDWFHVVMKK 260
Y + EL + + +++
Sbjct: 293 IYTVHELAELMYETIRE 309
>gi|194703378|gb|ACF85773.1| unknown [Zea mays]
gi|238009398|gb|ACR35734.1| unknown [Zea mays]
Length = 407
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/257 (44%), Positives = 166/257 (64%), Gaps = 11/257 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G+VATVFGA+G++G YL +L K GSQ+++P+RG R L++ GDL
Sbjct: 62 VRKGTGGRSSVSGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGCEDSPRHLKIMGDL 121
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ YHPR+ D I+ + SNVVINLIGRE+ T+N++ + N +P +LA ++KE
Sbjct: 122 GQIVPMKYHPRDVDSIKAVMAKSNVVINLIGREYETRNYSFEEVNHHMPEQLATIAKEHG 181
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S L A P S S+ RTK GE+ V +EFPEATI RP+ M G+ D+
Sbjct: 182 GIIRFIQVSCLGASP-------SSESRMLRTKAAGEQSVFKEFPEATIMRPATMIGTEDR 234
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + ++ + L + G I QPVYV DVAAAIV + KD + GKIY+ GP+
Sbjct: 235 ILNRWAQFAKN-WGFLPLVGGGSTKI-QPVYVIDVAAAIVNSLKDDGTSMGKIYELGGPE 292
Query: 244 RYLLSELLDWFHVVMKK 260
Y + EL + + +++
Sbjct: 293 IYTVHELAELMYETIRE 309
>gi|413939477|gb|AFW74028.1| NADH-ubiquinone oxidoreductase subunit [Zea mays]
Length = 460
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/257 (44%), Positives = 166/257 (64%), Gaps = 11/257 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G+VATVFGA+G++G YL +L K GSQ+++P+RG R L++ GDL
Sbjct: 115 VRKGTGGRSSVSGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGCEDSPRHLKIMGDL 174
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ YHPR+ D I+ + SNVVINLIGRE+ T+N++ + N +P +LA ++KE
Sbjct: 175 GQIVPMKYHPRDVDSIKAVMAKSNVVINLIGREYETRNYSFEEVNHHMPEQLATIAKEHG 234
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S L A P S S+ RTK GE+ V +EFPEATI RP+ M G+ D+
Sbjct: 235 GIIRFIQVSCLGASP-------SSESRMLRTKAAGEQSVFKEFPEATIMRPATMIGTEDR 287
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + ++ + L + G I QPVYV DVAAAIV + KD + GKIY+ GP+
Sbjct: 288 ILNRWAQFAKN-WGFLPLVGGGSTKI-QPVYVIDVAAAIVNSLKDDGTSMGKIYELGGPE 345
Query: 244 RYLLSELLDWFHVVMKK 260
Y + EL + + +++
Sbjct: 346 IYTVHELAELMYETIRE 362
>gi|242063496|ref|XP_002453037.1| hypothetical protein SORBIDRAFT_04g037200 [Sorghum bicolor]
gi|241932868|gb|EES06013.1| hypothetical protein SORBIDRAFT_04g037200 [Sorghum bicolor]
Length = 408
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/257 (43%), Positives = 166/257 (64%), Gaps = 11/257 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G+VATVFGA+G++G YL +L K GSQ+++P+RG R L++ GDL
Sbjct: 63 VRKGTGGRSSVSGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGCEDSHRHLKIMGDL 122
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ YHPR+ D I+ + SNVVINLIGRE+ T+N++ + N + +LA ++KE
Sbjct: 123 GQIVPMKYHPRDVDSIKAVMAKSNVVINLIGREYETRNYSFEEVNHHMAEQLATIAKEHG 182
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S L A P S S+ RTK GE+ +L+EFPEATI RP+ M G+ D+
Sbjct: 183 GIMRFIQVSCLGASP-------SSESRLLRTKAAGEQSILKEFPEATIMRPATMIGTEDR 235
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + ++ + L + G I QPVYV DVAAAIV + KD + GKIY+ GP+
Sbjct: 236 ILNRWAQFAKN-WGFLPLVGGGSTKI-QPVYVIDVAAAIVNSLKDDGTSMGKIYELGGPE 293
Query: 244 RYLLSELLDWFHVVMKK 260
Y + EL + + +++
Sbjct: 294 IYTVHELAELMYETIRE 310
>gi|328777827|ref|XP_624255.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Apis mellifera]
Length = 324
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 156/239 (65%), Gaps = 3/239 (1%)
Query: 44 QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKN 103
Q+I+P+R + Y +R+L++ GDLGQVL+ P+ R+++ I + IKYSNVVINLIG + T+N
Sbjct: 7 QLILPHRCDHYHIRELKVGGDLGQVLYHPFDLRDEESIIRTIKYSNVVINLIGSNYETRN 66
Query: 104 FTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV 163
F+ D +VE LA+L+K+ VE+FIH+S LN + P + S+ +TK++GE V
Sbjct: 67 FSFEDVHVEGARTLAKLAKQCNVERFIHMSCLNVEEKPTPIILKESSKILKTKWKGELAV 126
Query: 164 LREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI 223
EFPEATI RPS +YG DKF+ +Y R +L ++ KGE+T KQPV + DV + I
Sbjct: 127 KEEFPEATIIRPSVIYGHKDKFINHYMDQNRLNSNRLPLWDKGEKTEKQPVSIHDVISGI 186
Query: 224 VAACKDPDAAGKIYQAVGPKRYLLSELLDW-FHVVMKKGEPDYGYYRYDLRYDPVMPLK 281
VA ++ D GK YQ VGPKRY L+EL+ W F + +K + + D++YDP LK
Sbjct: 187 VAIVRNSDTVGKTYQFVGPKRYKLNELVKWMFDIKLKYFKNNIKI--VDMKYDPYAWLK 243
>gi|326429413|gb|EGD74983.1| hypothetical protein PTSG_07208 [Salpingoeca sp. ATCC 50818]
Length = 341
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/255 (42%), Positives = 163/255 (63%), Gaps = 15/255 (5%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGR S +GVVATVFGA+G+MG Y+ N+LGK GSQ+++P+RG+ +D R LR+ GDLGQ+
Sbjct: 15 GKGGRCSVSGVVATVFGATGFMGRYVVNRLGKVGSQVVVPFRGDEHDYRHLRVAGDLGQI 74
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
F P+ + D +R+A+++SNVVINLIG++ +++F++ D +V +A +KE GVE+
Sbjct: 75 HFLPFQLLDKDTVRRAVEHSNVVINLIGQDTDSRHFSLEDVHVTGALNIAEAAKEAGVER 134
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
IH+SAL AD + S+F ++K GE+ V FP ATI RPS ++G D+FL
Sbjct: 135 LIHMSALGADK-------TSNSRFLQSKALGEEAVASVFPSATIIRPSHIFGYEDRFLNR 187
Query: 189 YGHMWRHVFRKLAVYK---KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
+ + R L + G + K PVY DVA I AA DP A G +++ VGP+ Y
Sbjct: 188 FAGL-----RVLPCGQPLFDGGKAKKSPVYSLDVADGIAAAVGDPIAEGSVFEFVGPREY 242
Query: 246 LLSELLDWFHVVMKK 260
+ E++ + + + +K
Sbjct: 243 TMKEIVTFINQITRK 257
>gi|320170520|gb|EFW47419.1| Ndufa9 protein [Capsaspora owczarzaki ATCC 30864]
Length = 324
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 159/248 (64%), Gaps = 9/248 (3%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
+ GTGGRSS +GVVATVFG++G++G YL N+LG+ GSQ+I+PYRG+ + R L+ GDLG
Sbjct: 67 RAGTGGRSSVSGVVATVFGSTGFIGRYLVNRLGRVGSQLILPYRGDEHAYRHLKPMGDLG 126
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV 126
Q F YH R+ D +++ +++SNVV NL+G+EFAT+NF++ D +V +AR +E GV
Sbjct: 127 QFSFPFYHLRDKDTVKRLVEHSNVVFNLVGQEFATRNFSLHDVHVTGAETIARACQEAGV 186
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
+ IH+SALNA S F ++K GE+ VL FP ATI RP+ ++G D+
Sbjct: 187 GRLIHVSALNAS-------TESRSPFLQSKALGEQAVLAAFPNATIIRPATLFGPEDRLF 239
Query: 187 RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
R F + + G ET KQP+YV DVA A++ A ++ AGK ++ VGPK Y
Sbjct: 240 NRLSVPMRTPF-GVPLQNYG-ETRKQPIYVVDVARALIRAMEERTTAGKTFELVGPKEYT 297
Query: 247 LSELLDWF 254
++LL +
Sbjct: 298 TAQLLQYM 305
>gi|388520273|gb|AFK48198.1| unknown [Lotus japonicus]
Length = 396
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 177/287 (61%), Gaps = 13/287 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G+VATVFGA+G++G Y+ L K GSQ+++P+RG+ R L+L GDL
Sbjct: 50 VRKGTGGRSSVSGIVATVFGATGFLGRYVVQHLAKMGSQVLVPFRGSEDCHRHLKLMGDL 109
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQV+ Y+PR++ ++ + +NVVINLIGR+F T+N++ + + +LAR+SKE
Sbjct: 110 GQVVPMKYNPRDESSVKAVMAKANVVINLIGRDFETRNYSYEQVHYHMADQLARISKEHG 169
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S L A P+ P S+ R K E+ +LRE PEATI +P+ M G+ D+
Sbjct: 170 GIMRFIQVSCLGASPSSP-------SRMLRAKAAAEEAILRELPEATILKPATMIGTEDR 222
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + H + + L ++ G I QPVYV DVA A+ AA KD + GK+Y+ GP+
Sbjct: 223 ILNRWAHFAKK-YSFLPLFGDGSTKI-QPVYVVDVANALTAALKDDGTSMGKVYELGGPE 280
Query: 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGL-FP 289
Y + EL + + V+++ P Y + + P +L IN L FP
Sbjct: 281 VYTMHELAELMYEVIREW-PRYVKVPFPIAKALASPRELLINKLPFP 326
>gi|441618386|ref|XP_004088509.1| PREDICTED: LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1
alpha subcomplex subunit 9, mitochondrial-like [Nomascus
leucogenys]
Length = 393
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 114/263 (43%), Positives = 162/263 (61%), Gaps = 14/263 (5%)
Query: 2 CRVH---LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD 58
C++H + G GG SS +G+VAT FGA+G++G + N LG GSQ+IIPYR + D+
Sbjct: 50 CQLHHALIPHGKGGCSSISGIVATGFGATGFLGQCVVNHLGYVGSQVIIPYRCDTCDIMH 109
Query: 59 LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLA 118
L GDLG +LF + R+ D IR+ +++SNVVINL+G ++ TK+F D V+IP +A
Sbjct: 110 LCPMGDLGXLLFLEWDVRDKDSIRRVVEHSNVVINLVGXDWETKSFDFEDVFVKIPQAIA 169
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
++SKE V KF+H++ LN + I S++ R K GEK V FPEA I + D+
Sbjct: 170 QVSKEAEVGKFVHVAHLNVN-------IKSSSRYLRNKAVGEKAVRDAFPEAIIVKLLDI 222
Query: 179 YGSGDKFLRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIY 237
+G D+FL Y+ +M W F + G + +KQPVYV DV+ IV A KDPDA GK +
Sbjct: 223 FGREDRFLNYFANMCW---FGAIPHVSLGWKAVKQPVYVVDVSKGIVNAVKDPDANGKTF 279
Query: 238 QAVGPKRYLLSELLDWFHVVMKK 260
VGP RYLL +L+ + V +
Sbjct: 280 AFVGPNRYLLFDLVKYIFAVAHR 302
>gi|440796531|gb|ELR17640.1| NADH dehydrogenase, putative [Acanthamoeba castellanii str. Neff]
Length = 376
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 160/243 (65%), Gaps = 12/243 (4%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS +GVVATVFG +G++G ++ N+LGK GSQ+I+PYRG R L++ GDLGQ+
Sbjct: 37 GGRSSVSGVVATVFGCTGFLGRFVVNRLGKIGSQVIVPYRGEESAFRHLKVMGDLGQIAP 96
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
+ R+ + +R+A++YSNVVINL+G+ + T+NF+ D + E +A +KE GVE+FI
Sbjct: 97 VWFDLRDKETVRRAVQYSNVVINLLGKRWETRNFSFDDVHPEATRTIAEAAKEAGVERFI 156
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-FPEATIFRPSDMYGSGDKFLRYY 189
+SA AD N P S F R+K + EK VLRE FP+ATI RP+ +YG+ D FL +
Sbjct: 157 QVSAAGADVNSP-------SAFARSKGESEK-VLREIFPDATILRPTVLYGARDNFLVKW 208
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
G + R+ A + ++T QP+YV D+A A++ A DP+ AGK Y+ GPK Y L E
Sbjct: 209 GMIARY---WPAFVRTLKDTKFQPLYVADMATALMNALADPETAGKTYELGGPKVYTLEE 265
Query: 250 LLD 252
+ +
Sbjct: 266 ITE 268
>gi|218191814|gb|EEC74241.1| hypothetical protein OsI_09443 [Oryza sativa Indica Group]
Length = 408
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/257 (43%), Positives = 166/257 (64%), Gaps = 11/257 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G++ATVFGA+G++G YL +L K GSQ+++P+RG+ R L+L GDL
Sbjct: 63 VRKGTGGRSSVSGIIATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDCHRHLKLMGDL 122
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y+PR+ D I+ + SNVVINLIGRE+ T+N+ + N + +LA +SKE
Sbjct: 123 GQIVPMKYNPRDVDSIKAVMAKSNVVINLIGREYETRNYGFDEVNHHMAEQLAMISKEHG 182
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FIH+S+L A + P S+ R K GE+ VL+EFPEATI RP+ M G+ D+
Sbjct: 183 GIMRFIHVSSLGASASSP-------SRMLRAKAAGEESVLKEFPEATIMRPATMIGTEDR 235
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + ++ + L + G I QPVYV DVAAAIV + KD + GK Y+ GP+
Sbjct: 236 ILNRWAQFAKN-WGFLPLVDSGSTKI-QPVYVVDVAAAIVNSLKDDGTSMGKTYELGGPE 293
Query: 244 RYLLSELLDWFHVVMKK 260
Y + EL + + +++
Sbjct: 294 IYTVHELAELMYETIRE 310
>gi|307192450|gb|EFN75665.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Harpegnathos saltator]
Length = 274
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 138/214 (64%), Gaps = 4/214 (1%)
Query: 94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFY 153
+IGR++ TKNFT D +VE +LARL KE VE+FIH+S+LN D + GSQF
Sbjct: 1 MIGRDWETKNFTFNDVHVEAARKLARLCKEANVERFIHVSSLNIDDKVEPILLKEGSQFL 60
Query: 154 RTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW---RHVFRKLAVYKKGEETI 210
+TK +GE+ V EFPEATI RPS ++G D+FL Y ++ RH FR + +++KGE T
Sbjct: 61 KTKREGEQAVREEFPEATIVRPSTIWGQEDRFLNVYCEIYGLMRHQFRNIPIWEKGERTE 120
Query: 211 KQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRY 270
KQP+ V DVA I A KDP AGK YQ VGPKRY LS+LLDWFH + +YGY R
Sbjct: 121 KQPIAVYDVAGGITAIIKDPSTAGKTYQFVGPKRYKLSDLLDWFHKICIVNPIEYGYKRT 180
Query: 271 DLRYDPVMPLKLFINGLFP-GYPMGHLTPERVER 303
L+Y P+ LK+++N YP G+L E +ER
Sbjct: 181 HLKYSPLFQLKVYVNEFITFAYPFGYLQWEYLER 214
>gi|217072722|gb|ACJ84721.1| unknown [Medicago truncatula]
gi|388499986|gb|AFK38059.1| unknown [Medicago truncatula]
Length = 396
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 179/290 (61%), Gaps = 19/290 (6%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G+VATVFGA+G++G Y+ +L K GSQ+++P+RG+ R L+L GDL
Sbjct: 50 VRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDL 109
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ ++PR++ ++ + +NVVINLIGR++ T+NF+ + + + +LA++SKE
Sbjct: 110 GQIVPMKFNPRDESSVKAVMARANVVINLIGRDYETRNFSYEEVHYHMAEKLAKISKEHG 169
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S L A P S S+ R K E+ VLRE PEATIF+P+ M G+ D+
Sbjct: 170 GIMRFIQVSCLGASP-------SSSSRMLRCKAAAEEAVLRELPEATIFKPAVMIGTEDR 222
Query: 185 FLRYYGHMWRHVFRK---LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAV 240
L + W H +K + + G I QPVYV DVAAA+ A KD + GKIY+
Sbjct: 223 IL----NRWAHFAKKYGFIPLMGNGNTKI-QPVYVVDVAAALTTALKDDGTSMGKIYELG 277
Query: 241 GPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGL-FP 289
GP+ + + +L + + V+++ P Y + P +LF+N L FP
Sbjct: 278 GPEIFTVHQLAEIMYDVIREW-PRYVNVPLPIAKALATPRELFLNKLPFP 326
>gi|115449641|ref|NP_001048516.1| Os02g0816800 [Oryza sativa Japonica Group]
gi|47847737|dbj|BAD21515.1| putative NADH dehydrogenase [Oryza sativa Japonica Group]
gi|47848189|dbj|BAD22016.1| putative NADH dehydrogenase [Oryza sativa Japonica Group]
gi|113538047|dbj|BAF10430.1| Os02g0816800 [Oryza sativa Japonica Group]
Length = 408
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/257 (43%), Positives = 165/257 (64%), Gaps = 11/257 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G++ATVFGA+G++G YL +L K GSQ+++P+RG+ R L+L GDL
Sbjct: 63 VRKGTGGRSSVSGIIATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDCHRHLKLMGDL 122
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y+PR+ D I+ + SNVVINLIGRE+ T+N+ + N + +LA +SKE
Sbjct: 123 GQIVPMKYNPRDVDSIKAVMAKSNVVINLIGREYETRNYGFDEVNHHMAEQLAMISKEHG 182
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S+L A + P S+ R K GE+ VL+EFPEATI RP+ M G+ D+
Sbjct: 183 GIMRFIQVSSLGASASSP-------SRMLRAKAAGEESVLKEFPEATIMRPATMIGTEDR 235
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + ++ + L + G I QPVYV DVAAAIV + KD + GK Y+ GP+
Sbjct: 236 ILNRWAQFAKN-WGFLPLVDSGSTKI-QPVYVVDVAAAIVNSLKDDGTSMGKTYELGGPE 293
Query: 244 RYLLSELLDWFHVVMKK 260
Y + EL + + +++
Sbjct: 294 IYTVHELAELMYETIRE 310
>gi|312088766|ref|XP_003145987.1| hypothetical protein LOAG_10415 [Loa loa]
Length = 257
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 142/212 (66%), Gaps = 2/212 (0%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+KGTGGR SF+G V TVFG +G +G L N+L K+G QII+P R Y R L++ G+L
Sbjct: 46 FRKGTGGRCSFSGNVVTVFGCTGLLGKLLINRLAKEGHQIILPSRQEPYYTRQLKIYGEL 105
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQVL P+ ++++ IR+A++YSNVV+NLIG TKN++ + +VE R+AR++KEMG
Sbjct: 106 GQVLLLPFQLKDEESIRQAMRYSNVVVNLIGTRCETKNYSFEETHVEGARRIARIAKEMG 165
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG-DK 184
++KFIH+SA+NA N P + SQF TK GE+ V EFP AT+ RPS MYG D
Sbjct: 166 IQKFIHMSAMNASKNTPPTLFNKPSQFLLTKGLGEEVVREEFPSATVLRPSMMYGGNYDA 225
Query: 185 FLRYYGHMWRHVFRKLA-VYKKGEETIKQPVY 215
F+ Y+ + R R + VYKKGE T K P++
Sbjct: 226 FINYFLAIQRIPHRSVIYVYKKGEHTYKMPIW 257
>gi|356548101|ref|XP_003542442.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Glycine max]
Length = 396
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 164/249 (65%), Gaps = 11/249 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G++ATVFGA+G++G Y+ +L K GSQ+++P+RG+ + R L+L GDL
Sbjct: 50 VRKGTGGRSSVSGIIATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDNPRHLKLMGDL 109
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y+PR++ ++ + +NVVINLIGR++ T+N++ + + + +LA++SKE
Sbjct: 110 GQIVPMKYNPRDESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEQLAKISKEHG 169
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S L A P+ P S+ RTK E+ +LRE PEATI +P+ M G+ D+
Sbjct: 170 GILRFIQVSCLGASPSSP-------SRMLRTKSAAEEMILRELPEATILKPAVMIGTEDR 222
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + H + + L ++ G I QPVYV DVAAA+ + KD + GKIY+ GP+
Sbjct: 223 ILNPWAHFAKK-YGFLPLFGDGSTKI-QPVYVIDVAAALTSLLKDDGTSMGKIYELGGPE 280
Query: 244 RYLLSELLD 252
+ + EL D
Sbjct: 281 IFTVHELAD 289
>gi|255645431|gb|ACU23211.1| unknown [Glycine max]
Length = 396
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 164/249 (65%), Gaps = 11/249 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G++ATVFGA+G++G Y+ +L K GSQ+++P+RG+ + R L+L GDL
Sbjct: 50 VRKGTGGRSSVSGIIATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDNPRHLKLMGDL 109
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y+PR++ ++ + +NVVINLIGR++ T+N++ + + + +LA++SKE
Sbjct: 110 GQIVPMKYNPRDESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEQLAKISKEHG 169
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S L A P+ P S+ RTK E+ +LRE PEATI +P+ M G+ D+
Sbjct: 170 GILRFIQVSCLGASPSSP-------SRMLRTKSAAEEMILRELPEATILKPAVMIGTEDR 222
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + H + + L ++ G I QPVYV DVAAA+ + KD + GKIY+ GP+
Sbjct: 223 ILNPWAHFAKK-YGFLPLFGDGSTKI-QPVYVIDVAAALTSLLKDDGTSMGKIYELGGPE 280
Query: 244 RYLLSELLD 252
+ + EL D
Sbjct: 281 IFTVHELAD 289
>gi|326507730|dbj|BAJ86608.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514510|dbj|BAJ96242.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525485|dbj|BAJ88789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 178/287 (62%), Gaps = 13/287 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G+VATVFGA+G++G Y+ +L K GSQ+++P+RG R L+L GDL
Sbjct: 64 VRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGCEDSHRHLKLMGDL 123
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y+PR+ + I+ A+ SNVVINLIGRE+ T+N+ + N ++ +LA +SKE
Sbjct: 124 GQIVPMNYNPRDVNSIKTAVAKSNVVINLIGREYETRNYGFEEVNHQMAEQLAMISKEHG 183
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +SAL A + P S+ R K GE+ VL+EFPEATI RP+ + G+ D+
Sbjct: 184 GIVRFIQVSALGASASSP-------SRLLRAKAAGEESVLKEFPEATIMRPATLIGTEDR 236
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + M+ + L ++ G T QPVYV DVAAAIV + KD + GK Y+ GP
Sbjct: 237 ILNRWA-MYAKNWGFLPLFGGG-STKFQPVYVVDVAAAIVNSLKDDGTSMGKTYELGGPD 294
Query: 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGL-FP 289
Y + +L + + +++ P Y + + P ++ +N + FP
Sbjct: 295 VYTVHDLAEMMYETIRE-YPRYVNLPFPIAKAMASPREMLLNKVPFP 340
>gi|225437963|ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Vitis vinifera]
gi|297744229|emb|CBI37199.3| unnamed protein product [Vitis vinifera]
Length = 399
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 177/287 (61%), Gaps = 13/287 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G+VA VFGA+G++G Y+ +L K GSQ+++P+RG+ R L+L GDL
Sbjct: 53 VRKGTGGRSSVSGIVAVVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDL 112
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y+PR+++ I+ + +NVV+NLIGRE+ T+N++ + N + +LA +SKE
Sbjct: 113 GQIVPMKYNPRDENSIKAVMAKANVVLNLIGREYETRNYSFEEVNHHMAEQLAMISKEHG 172
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S L A P+ P S+ K E+ VLRE PEATI RP+ M G+ D+
Sbjct: 173 GIMRFIQVSCLGASPSSP-------SRMLMAKAAAEEAVLRELPEATIMRPAVMIGTEDR 225
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + + + L +Y G T QPVYV DVAAAI+AA KD + GK+Y+ GP+
Sbjct: 226 ILNRWAQFAKK-YGFLPLYGDG-STKFQPVYVIDVAAAIMAALKDDGTSMGKVYELGGPE 283
Query: 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGL-FP 289
+ + EL + +++ P Y + + +P ++ +N + FP
Sbjct: 284 IFTMHELAAVMYDTIREW-PRYVKVPFPIAKAMTLPREILLNKVPFP 329
>gi|255082926|ref|XP_002504449.1| predicted protein [Micromonas sp. RCC299]
gi|226519717|gb|ACO65707.1| predicted protein [Micromonas sp. RCC299]
Length = 390
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 159/253 (62%), Gaps = 11/253 (4%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+GTGGRSS +G+ +TVFG+SG++G Y+ N +GK GS++I+P R N + L++ GDLGQ
Sbjct: 48 RGTGGRSSISGITSTVFGSSGFLGRYVVNHIGKSGSKMILPNRCNENARQHLKVMGDLGQ 107
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
++ + R+ D I+ A++ SNVV+N++GRE+ T+NF+ D +VE PA+LA + KE+GVE
Sbjct: 108 IVHLDFSIRDADAIKYAVERSNVVVNMVGREWETRNFSFEDVHVEFPAKLAEICKEVGVE 167
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+ +H+SAL A P S++Y+TK G+ V FP ATI +P+ + G+ D+ L
Sbjct: 168 RLVHVSALGASHTNP-------SKYYQTKAAGDDAVRAAFPNATIVKPAKLIGTEDRLLN 220
Query: 188 YYGHMWRHVFR-KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
+ H + LA E+ QPVYV DVA AI A +D + AG+ ++ G K Y
Sbjct: 221 VFAE---HTCKFPLAPLVDDGESKHQPVYVDDVALAIQAIVEDEETAGQTFELAGDKVYT 277
Query: 247 LSELLDWFHVVMK 259
+ ++L + ++
Sbjct: 278 MEDMLRFVQKTIR 290
>gi|340383427|ref|XP_003390219.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Amphimedon queenslandica]
Length = 367
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 149/239 (62%), Gaps = 7/239 (2%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSSF+G VATVFG +G+ G Y+ N+LG+ GSQI+ PYRG+ +D R LR GDL
Sbjct: 32 VKRGTGGRSSFSGTVATVFGCTGFCGRYIVNRLGQVGSQIVAPYRGDEHDYRHLRPMGDL 91
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+LF+ ++ R+ + + K ++YSNVV+N IGR++ T+NF D +V+ +A +K+ G
Sbjct: 92 GQILFRSFNLRDPESVTKTLEYSNVVVNAIGRDYETRNFKFDDVHVQGSRVIAEAAKKAG 151
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++ IH SAL A + P S+F ++K GE+ V FP+ATI RP+ +YG D++
Sbjct: 152 VKRLIHFSALGASKDSP-------SKFLQSKAAGEEAVREVFPDATIIRPAAIYGREDRY 204
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
++ + G K PV V DVA A+V D AG Y+ VGPK+
Sbjct: 205 FNLCAKFKVFPLGRVPLMNYGHGIYKYPVSVVDVAKAVVQIIADQGTAGTTYELVGPKQ 263
>gi|224065531|ref|XP_002301843.1| predicted protein [Populus trichocarpa]
gi|222843569|gb|EEE81116.1| predicted protein [Populus trichocarpa]
Length = 399
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 179/287 (62%), Gaps = 13/287 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G+VATVFGA+G++G Y+ +L K GSQ+++P+RG+ R L+L GDL
Sbjct: 53 IRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDL 112
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y+PR+++ I+ + +NVVINLIGR+ T+N++ + N + +LA +SKE
Sbjct: 113 GQIVPMKYNPRDENSIKAVMAKANVVINLIGRDHETRNYSFEELNHGMTEQLAMISKEHG 172
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S L A + P S+ R K GE+ VLRE PEAT+ +P+ M G+ D+
Sbjct: 173 GIMRFIQVSCLGASASSP-------SRMLRAKAAGEEAVLREMPEATVMKPAVMIGTEDR 225
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + H + + L + G I QPVYV DVAAAI+AA KD ++ GK+Y+ GP+
Sbjct: 226 ILNRWAHFAKK-YSFLPLIGDGSTKI-QPVYVVDVAAAIIAALKDDGSSMGKVYELGGPE 283
Query: 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGL-FP 289
+ + EL D H V+++ P Y + + P + IN + FP
Sbjct: 284 IFTVHELADLMHDVIREW-PRYVKVPFPIAKALATPRAVLINKVPFP 329
>gi|118485658|gb|ABK94679.1| unknown [Populus trichocarpa]
Length = 399
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 182/292 (62%), Gaps = 14/292 (4%)
Query: 1 MCRVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR 60
+C + ++KGTGGRSS +G+VATVFGA+G++G Y+ +L K GSQ+++P+RG+ R L+
Sbjct: 49 VCHL-IRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLK 107
Query: 61 LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARL 120
L GDLGQ++ Y+PR+++ I+ + +NVVINLIGR+ T+N++ + N + +LA +
Sbjct: 108 LMGDLGQIVPMKYNPRDENSIKAVMAKANVVINLIGRDHETRNYSFEELNHGMTEQLAMI 167
Query: 121 SKEM-GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMY 179
SKE G+ +FI +S L A + P S+ R K GE+ VLRE PEAT+ +P+ M
Sbjct: 168 SKEHGGIMRFIQVSCLGASASSP-------SRMLRAKAAGEEAVLREMPEATVMKPAVMI 220
Query: 180 GSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQ 238
G+ D+ L + H + + L + G I QPVYV DVAAAI+AA KD ++ GK+Y+
Sbjct: 221 GTEDRILNRWAHFAKK-YSFLPLIGDGSTKI-QPVYVVDVAAAIIAALKDDGSSMGKVYE 278
Query: 239 AVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGL-FP 289
GP+ + + EL D H V+++ P Y + + P + IN + FP
Sbjct: 279 LGGPEIFTVHELADLMHDVIREW-PRYVKVPFPIAKALATPRAVLINKVPFP 329
>gi|119609245|gb|EAW88839.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa,
isoform CRA_c [Homo sapiens]
Length = 254
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 129/185 (69%), Gaps = 7/185 (3%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDL
Sbjct: 20 MPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDL 79
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+LF + R+ D IR+ +++SNVVINLIGR++ TKNF D V+IP +A+LSKE G
Sbjct: 80 GQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAG 139
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+F
Sbjct: 140 VEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRF 192
Query: 186 LRYYG 190
L +
Sbjct: 193 LNSFA 197
>gi|159489336|ref|XP_001702653.1| NADH:ubiquinone oxidoreductase 39 kDa subunit [Chlamydomonas
reinhardtii]
gi|33943527|gb|AAQ55458.1| putative NADH:ubiquinone oxidoreductase 39 kDa subunit precursor
[Chlamydomonas reinhardtii]
gi|158280675|gb|EDP06432.1| NADH:ubiquinone oxidoreductase 39 kDa subunit [Chlamydomonas
reinhardtii]
Length = 397
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 165/296 (55%), Gaps = 26/296 (8%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
K G GGRSS +G+ ATVFGA+G++GSY+ N+L K+GSQ++ P+R + L+ GDLG
Sbjct: 42 KLGPGGRSSVSGITATVFGANGFLGSYIVNELAKRGSQVVCPFRSTENEAMHLKQMGDLG 101
Query: 67 QVLFQP-YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
Q++ P RNDD+I++AI SNV+IN +G TKN++ D +V+ P RLA+L+ E G
Sbjct: 102 QIVLLPELDIRNDDDIKRAISRSNVIINCVGMRLQTKNWSFEDVHVDFPKRLAKLAAETG 161
Query: 126 -VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
V++ IH S + AD N + + RTK G+KEVL FP+ATI RP D+ G D
Sbjct: 162 QVQRLIHFSDMGADENHKSLRM-------RTKAVGDKEVLDAFPDATIVRPGDIVGIEDH 214
Query: 185 FLRYYGHMWRHVFRKLA-VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
F Y +++ A V + G I QP YV DVA A+ A + PD AGK GP+
Sbjct: 215 FYNYL--IYQLTLTVFAPVVESGSNKI-QPTYVLDVADAVAALLRKPDTAGKTLYLGGPE 271
Query: 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLF------INGLFPGYPM 293
+ E+ D ++ YR D + P +K + + PG PM
Sbjct: 272 VLTMREVYDLLLKTLR-------IYRDDTVHLPAWAVKAMYKPFDSVRRMLPGLPM 320
>gi|116787047|gb|ABK24353.1| unknown [Picea sitchensis]
Length = 401
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 171/264 (64%), Gaps = 16/264 (6%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G++ATVFGA+G++G Y+ +L K GSQ+++P+RG+ R L+L GDL
Sbjct: 56 IRKGTGGRSSVSGIIATVFGATGFLGRYVVQQLAKTGSQVLVPFRGSEDSPRHLKLMGDL 115
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y+PR++ I+ + SNVVINLIGRE+ T+NF+ + NV+I LA+++KE
Sbjct: 116 GQIVPMKYNPRDESSIKAVMAKSNVVINLIGREYETRNFSFEEVNVDISEHLAKIAKEHG 175
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S L A + P S+ RTK E+ V RE PEATI RP+ M G+ D+
Sbjct: 176 GIVRFIQLSCLGASSSSP-------SKMQRTKAAAEEVVRRELPEATILRPAAMVGTEDR 228
Query: 185 FLRYYGHMWRHVFRKLAVYK-KGEETIK-QPVYVGDVAAAIVAACKDPDAA-GKIYQAVG 241
L + W + +K +V G+ + + QPVYV DVAAAI+AA KD + GK Y+ G
Sbjct: 229 IL----NKWAQIAKKWSVLPIIGDGSTRLQPVYVIDVAAAIIAALKDDGTSIGKTYELGG 284
Query: 242 PKRYLLSELLDWFHVVMKKGEPDY 265
P + + +L+ ++++ EP +
Sbjct: 285 PDVFTIDQLVHLMFEMIRE-EPRF 307
>gi|224132264|ref|XP_002321296.1| predicted protein [Populus trichocarpa]
gi|222862069|gb|EEE99611.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 169/257 (65%), Gaps = 11/257 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G+VATVFGA+G++G Y+ +L K GSQ+++P+RG+ D R L+L GDL
Sbjct: 48 IRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSDDDPRHLKLMGDL 107
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y+PR+++ I+ + +NVVINLIGR++ T+N++ + N + +LA +SKE
Sbjct: 108 GQIVPMKYNPRDENSIKAVMAKANVVINLIGRDYETRNYSFEELNHAMAGQLAMISKEHG 167
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S L A + P S+ R K GE+ VLRE PEAT+ +P+ M G+ D+
Sbjct: 168 GIMRFIQVSCLGASASSP-------SRLLRAKAAGEEAVLREMPEATVMKPAVMIGTEDR 220
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + H + + L + G I QPVYV D+AAAI+AA KD + GK+Y+ GP+
Sbjct: 221 ILNRWAHFTKK-YSFLPLIGDGSTKI-QPVYVVDIAAAIIAALKDDGTSMGKVYELGGPE 278
Query: 244 RYLLSELLDWFHVVMKK 260
+ + EL + + V+++
Sbjct: 279 IFTVHELAELMYDVIRE 295
>gi|68437403|ref|XP_698292.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Danio rerio]
Length = 234
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 131/185 (70%), Gaps = 7/185 (3%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
G GGRSSF+G+ ATVFGA+G++G Y+ N+LG+ GSQ++IPYR + YD+ LR GDLGQ
Sbjct: 45 SGKGGRSSFSGLAATVFGATGFLGRYVVNRLGRMGSQVVIPYRCDQYDLMYLRPMGDLGQ 104
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
++F + PRN + I++AI +SNVVINL+GRE+ T N+ D V IP ++A+ ++E G++
Sbjct: 105 IIFMEWDPRNKESIQRAISHSNVVINLVGREWETSNYKYEDVFVSIPLQIAKATREAGIK 164
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
KFIH+S LNAD P+ Y+ R K GE+ V EFP+A I + S+++G D+FL
Sbjct: 165 KFIHMSHLNADIRSPSKYL-------RNKAVGEEAVRNEFPDAIIMKASELFGREDRFLN 217
Query: 188 YYGHM 192
++ +M
Sbjct: 218 HFANM 222
>gi|145351563|ref|XP_001420142.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580375|gb|ABO98435.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 366
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 150/242 (61%), Gaps = 9/242 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
GTGGRSSF+G+ TVFG++G++G Y+ + + K GS++I+P R + D + L++ GDLGQ+
Sbjct: 22 GTGGRSSFSGITCTVFGSTGFLGRYVVHHVAKSGSRMILPTRCSENDRQHLKVMGDLGQI 81
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ Y R+++ IR A++ SNVVIN++GRE+ T+NF+ D NV P +LA + ++GV +
Sbjct: 82 VQLDYGIRDEETIRYAVERSNVVINMVGREWETRNFSFEDVNVTFPKKLAEICADVGVRR 141
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
+H+SAL A+ + P+ Y YR+K GE V FP ATI RP+ + G D+FL
Sbjct: 142 LVHVSALGAEEDHPSAY-------YRSKAAGEAAVREAFPSATIVRPAKIVGVEDRFLNI 194
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+G R + + + G +T QPV+V DVA AI D +G+ Y+ G K Y
Sbjct: 195 FGEHSRK-YPAVPIIDGG-DTKHQPVFVDDVAVAIRQIVHDELTSGRTYELAGNKVYTFD 252
Query: 249 EL 250
EL
Sbjct: 253 EL 254
>gi|348684267|gb|EGZ24082.1| hypothetical protein PHYSODRAFT_284843 [Phytophthora sojae]
Length = 344
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 156/257 (60%), Gaps = 17/257 (6%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GR S NG+ A VFG++G++G Y+C LG G+ ++PYRG+ +V LR+ DLG V
Sbjct: 16 AGRVSNNGITAAVFGSTGFLGRYVCAHLGTNGNAYVLPYRGDESEVSHLRVSADLGNVAQ 75
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATK-------NFTIADANVEIPARLARLSKE 123
QP+HPR+ D I +A++ +++V+NLIG+ + TK N+T D +V++ +A ++KE
Sbjct: 76 QPFHPRDRDSIFEAVEGADIVVNLIGKHYQTKHILPWWINYTYDDVHVDVARTIAEVAKE 135
Query: 124 MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGD 183
GV + +H+S+L A PN P S++ +K++GE V + FPEA I RPS+M+G D
Sbjct: 136 AGVPRMVHVSSLLAQPNSP-------SEWAASKFRGEVAVRKAFPEANIVRPSNMFGPED 188
Query: 184 KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
+ L + G+ R + + V G+ I QPV+V DVA AI +DP GK ++ VG +
Sbjct: 189 RLLVWIGN--RLNYGGVPVVNNGDAVI-QPVFVNDVAKAIYHITQDPTIQGKTFELVGDE 245
Query: 244 RYLLSELLDWFHVVMKK 260
+ EL D+ + K+
Sbjct: 246 EFTYKELADYVFDITKR 262
>gi|303281276|ref|XP_003059930.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458585|gb|EEH55882.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 353
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 157/255 (61%), Gaps = 12/255 (4%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
+GTGGRSS +G+ +TVFGA+GY+G Y+ N LGK GS++I+P R + L++ GDLG
Sbjct: 12 SRGTGGRSSISGITSTVFGATGYLGRYVVNHLGKSGSRMILPTRCGDNAKQHLKVMGDLG 71
Query: 67 QVL-FQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
Q++ R+D I+ A++ SNVV+NL+GRE+ T+NF+ D + + P RLAR+ KE+G
Sbjct: 72 QIVDLAGLKIRDDSAIKYAVERSNVVVNLLGREWETRNFSFDDVHRDFPERLARICKELG 131
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+ +H+SAL A + P S++YRTK +G++ V FP AT+ +P+ + G+ D+
Sbjct: 132 VERLVHVSALGATLDHP-------SKYYRTKAEGDEAVRAAFPNATVVKPAKLIGTEDRL 184
Query: 186 LRYYG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L + H + + L + G + QPVYV DVA AI A D AG+ ++ G K
Sbjct: 185 LNVFAEHTCKFPVQTL-IDDGGSK--HQPVYVDDVALAIRAIVHDESTAGRTFELCGEKI 241
Query: 245 YLLSELLDWFHVVMK 259
+ ++L +++
Sbjct: 242 LTMEDMLKMTQSIIR 256
>gi|402218577|gb|EJT98653.1| NADP-binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 375
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 148/247 (59%), Gaps = 14/247 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L+KG GRS+ +G TVFGASG++G Y+ +KL K GS ++IPYR + YD+R LR+ GDL
Sbjct: 35 LRKGIEGRSAISGHTITVFGASGFLGRYIVSKLAKSGSSVVIPYRDD-YDIRHLRVSGDL 93
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
G V+ + RN+ +I + +++S+ V NL+G ++ TKNF D +V+ AR+AR+++E
Sbjct: 94 GAVVQLEWDLRNEQQIAECLRHSDTVYNLVGLDYETKNFKWKDVHVDGAARIARIARENN 153
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V +F+ +S LNA P + S +YR KY+GE+ VL EFP+A I RPS MYG D+F
Sbjct: 154 VARFVQVSHLNASP-------TSTSHYYRAKYEGEQAVLGEFPDAVIVRPSAMYGHEDRF 206
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L G W F+ GE+T +PV+V DVA + P GP Y
Sbjct: 207 LNQLG-FWDMTFK-----FNGEQTKVRPVHVIDVAEILYRMLDMPVLPSNPVNLPGPTTY 260
Query: 246 LLSELLD 252
ELL+
Sbjct: 261 THEELLN 267
>gi|302769736|ref|XP_002968287.1| hypothetical protein SELMODRAFT_89106 [Selaginella moellendorffii]
gi|300163931|gb|EFJ30541.1| hypothetical protein SELMODRAFT_89106 [Selaginella moellendorffii]
Length = 362
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/259 (42%), Positives = 158/259 (61%), Gaps = 18/259 (6%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GG S+ G + T+FG++G +G + N L K G+Q +IPYRG R L++ GDLGQ
Sbjct: 26 KTAGGLSAATGFIVTIFGSTGMLGRAVVNNLAKIGAQCMIPYRGLEDKPRHLKVMGDLGQ 85
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM-GV 126
++ + R+DD IR AI SNVVINLIG+E+ T+N+ + N++I R+AR+SKE G+
Sbjct: 86 IVPFVCNIRDDDAIRAAIAKSNVVINLIGQEYETRNYGFEEVNIDIAQRIARISKEHGGI 145
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
++IH S + AD N P S+ +RTK GE+ V +EFPEATI RP+ M+G DKFL
Sbjct: 146 VRYIHTSCVGADENSP-------SKQHRTKALGEEAVRQEFPEATIMRPASMFGYHDKFL 198
Query: 187 RYY---GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA--AGKIYQAVG 241
+ W +V + G+ + QPV V DVAAA +AA K+ + GK+Y+ G
Sbjct: 199 NRFATKAKFWPNV----PTFFDGKTKV-QPVCVLDVAAAFLAAVKEKEGIHVGKVYELGG 253
Query: 242 PKRYLLSELLDWFHVVMKK 260
P Y + ELL W V+++
Sbjct: 254 PDVYTIHELLLWMFEVLRE 272
>gi|357137610|ref|XP_003570393.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Brachypodium distachyon]
Length = 412
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 173/287 (60%), Gaps = 13/287 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G+VATVFGA+G++G Y+ +L K GSQ+++P+RG R L+L GDL
Sbjct: 63 VRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGCEDSHRHLKLMGDL 122
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y+PR+ D I+ A+ SNVVINLIGRE+ T+N+ + N + +LA +SKE
Sbjct: 123 GQIVPMKYNPRDVDSIKTAVAKSNVVINLIGREYETRNYGFEEVNHHMAEQLAMISKEHG 182
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ +FI +S+L S S+ R K GE+ VL+EFPEATI RP+ + G+ D+
Sbjct: 183 GIVRFIQVSSL-------GASSSSPSRMLRAKAAGEESVLKEFPEATIMRPATLIGTEDR 235
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + M+ + L + G I QPVYV DVAAAIV + KD + GK Y+ GP
Sbjct: 236 ILNRWA-MYAKNWGFLPLMGGGSTKI-QPVYVVDVAAAIVNSLKDDGTSMGKTYELGGPD 293
Query: 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGL-FP 289
Y + +L + +++ P Y + + P ++ +N + FP
Sbjct: 294 IYTVHDLAELMFETIREW-PRYVNVPFPIARAIASPREMLLNKVPFP 339
>gi|302788642|ref|XP_002976090.1| hypothetical protein SELMODRAFT_104564 [Selaginella moellendorffii]
gi|300156366|gb|EFJ22995.1| hypothetical protein SELMODRAFT_104564 [Selaginella moellendorffii]
Length = 353
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/259 (42%), Positives = 159/259 (61%), Gaps = 18/259 (6%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GG S+ G + T+FG++G +G + N L K G+Q +IPYRG R L++ GDLGQ
Sbjct: 17 KTAGGLSAATGFIVTIFGSTGMLGRAVVNNLAKIGAQCMIPYRGLEDKPRHLKVMGDLGQ 76
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM-GV 126
++ + R++D IR AI SNVVINLIG+E+ T+N+ + N++I R+AR+SKE G+
Sbjct: 77 IVPFVCNIRDEDAIRAAIAKSNVVINLIGQEYETRNYGFEEVNIDIAQRIARISKEHGGI 136
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
++IH S + AD N P S+ +RTK GE+ V +EFPEATI RP+ M+G DKFL
Sbjct: 137 VRYIHTSCVGADENSP-------SKQHRTKALGEEAVRQEFPEATIMRPASMFGYHDKFL 189
Query: 187 RYY---GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA--AGKIYQAVG 241
+ W +V ++ G+ + QPV V DVAAA +AA K+ + GK+Y+ G
Sbjct: 190 NRFATKAKFWPNV----PMFFDGKTRV-QPVCVLDVAAAFLAAVKEKEGIHVGKVYELGG 244
Query: 242 PKRYLLSELLDWFHVVMKK 260
P Y + ELL W V+++
Sbjct: 245 PDVYTIHELLLWMFEVLRE 263
>gi|301105479|ref|XP_002901823.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit,
putative [Phytophthora infestans T30-4]
gi|262099161|gb|EEY57213.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit,
putative [Phytophthora infestans T30-4]
Length = 344
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 155/256 (60%), Gaps = 17/256 (6%)
Query: 12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQ 71
GR NG++ATVFGA+G +G Y+C LG G+ ++PYRG+ +V LR+ DLG V Q
Sbjct: 17 GRVRGNGIIATVFGATGSLGRYVCAHLGTNGNGYVVPYRGDDAEVSHLRVSADLGNVAQQ 76
Query: 72 PYHPRNDDEIRKAIKYSNVVINLIGREFATK-------NFTIADANVEIPARLARLSKEM 124
P+HPR+ D I +A++ S++VINLIG+ + TK N++ D +V++ +A ++KE
Sbjct: 77 PFHPRDRDSILEAVEGSDIVINLIGKHYQTKHILPWWINYSYDDVHVDVARTIAEVAKEA 136
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
GV + +H+S+L A PN P S++ +K++GE V + FPEA I RPS+M+G D+
Sbjct: 137 GVPRMVHVSSLLAQPNSP-------SEWAASKFRGEVAVRKAFPEANIVRPSNMFGPEDR 189
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L + G+ R + + V G+ I QPV+V DVA AI +D GK ++ VG +
Sbjct: 190 LLVWMGN--RLNYGGVPVVDNGDAVI-QPVFVNDVAKAIYHITQDETIQGKTFEFVGDEE 246
Query: 245 YLLSELLDWFHVVMKK 260
+ EL D+ + K+
Sbjct: 247 FTYKELADYVFDITKQ 262
>gi|358054225|dbj|GAA99675.1| hypothetical protein E5Q_06378 [Mixia osmundae IAM 14324]
Length = 386
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 149/246 (60%), Gaps = 14/246 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L+ G GGR SF G VATVFG +G++G YL +KL K+G+Q+IIPYR + R L++ GDL
Sbjct: 48 LRSGPGGRHSFTGHVATVFGCTGFLGRYLVHKLAKKGTQVIIPYRDE-DEKRHLKVMGDL 106
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++ + RND +I +A+++S+VV NL+GR++ TKNF + +++ R+A +++ G
Sbjct: 107 GQIVPMEWDIRNDSQIEEAVRHSDVVYNLVGRDYETKNFKFHEVHIDGARRIASIAQLAG 166
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V + IH+S LNADP+ P S R K +GE+ V FP ATI RP MYG D+
Sbjct: 167 VSRLIHVSHLNADPDSP-------SAVLRCKAEGEEAVKNAFPSATIVRPGWMYGHEDRL 219
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L ++ +FR ++T+ +PV+V DVA A+ AG+ + GP+ Y
Sbjct: 220 LNTLA-VYPFIFR-----INDQQTVIKPVHVLDVAEAMAIMLDAESTAGQTFSLPGPQEY 273
Query: 246 LLSELL 251
+L+
Sbjct: 274 TYEQLI 279
>gi|328767653|gb|EGF77702.1| hypothetical protein BATDEDRAFT_37370 [Batrachochytrium
dendrobatidis JAM81]
Length = 383
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 164/290 (56%), Gaps = 27/290 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
ATVFGA+G++G Y+ N LGK G+ ++ PYRG+ + R LR GDLGQ++ + R ++
Sbjct: 53 TATVFGATGFLGRYVVNNLGKIGTTVVTPYRGSDDERRHLRNMGDLGQIVQLRFDLRREE 112
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+I + +K+S+VV NL+GR++ TKNF +VE RLAR+++E GV +FIH+SALNA
Sbjct: 113 QIAECLKHSDVVYNLVGRDYETKNFNFEQVHVEGARRLARIARENGVARFIHMSALNASE 172
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N P SQF RTK GEK VL E+P+ATI R + MYG D+F G W F K
Sbjct: 173 NSP-------SQFLRTKALGEKAVLEEYPDATIVRSATMYGDEDRFWNRMG--W---FAK 220
Query: 200 LA------VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
A V G+ I+ PVYVGDVA + ++ + GK+ + GP+ Y L+
Sbjct: 221 WAPGSILPVVHNGKARIR-PVYVGDVAIVLSKMLQNDASVGKMVELYGPREYHYRTLVGL 279
Query: 254 FHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVER 303
F ++ + + P+ L I YP+ ++P+ +ER
Sbjct: 280 FQKIVLRERTILNIPK------PIAKLAAKIWDQLLVYPV--ISPDDIER 321
>gi|412992660|emb|CCO18640.1| predicted protein [Bathycoccus prasinos]
Length = 431
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 151/246 (61%), Gaps = 12/246 (4%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
KKGTGGRSS++G+ A VFG++G++G Y+ N L K GS++++P R + + L+ GDLG
Sbjct: 82 KKGTGGRSSYSGITAAVFGSTGFLGRYVVNHLAKNGSRVLVPTRCSENHRQHLKPMGDLG 141
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKE-MG 125
Q++ Y R+D+ I+ A++ +NVVIN++GRE+ T+NF+ D + + P RLA KE
Sbjct: 142 QIVQFDYSMRDDEAIKYAVERANVVINMVGREWETRNFSFEDVHRDFPRRLAEACKESSS 201
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++ IH+SAL AD ++ S++YRTK +G++EV R FP ATI +P+ + G D+F
Sbjct: 202 VKRLIHVSALGAD-------VNAKSKYYRTKAEGDEEVRRIFPRATIVKPAKLIGVEDRF 254
Query: 186 LRYYG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L + H + F L E+ QPV V DVA AI D + GK Y G K
Sbjct: 255 LNVFAEHASKFPFVPLTGLG---ESKHQPVSVDDVAIAISQMPYDEETVGKEYVLAGEKT 311
Query: 245 YLLSEL 250
+ + EL
Sbjct: 312 FTMEEL 317
>gi|449017696|dbj|BAM81098.1| NADH dehydrogenase I alpha subcomplex 9, mitochondrial precursor
[Cyanidioschyzon merolae strain 10D]
Length = 392
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 164/255 (64%), Gaps = 7/255 (2%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+GTGGRSS +G++ATVFG++G++G Y+ ++LG+ GS + + +RG+ D R L++ GDLGQ
Sbjct: 46 EGTGGRSSVSGIIATVFGSTGFLGRYVVSQLGRIGSTVFVAWRGDELDNRHLKVMGDLGQ 105
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
+ R+ + +R++I SNVVINLIG+ + T+ +++ D N+ + +ARL+ VE
Sbjct: 106 INPIQIEARDINSLRRSIAGSNVVINLIGKWYDTRYYSLEDVNIGVAETIARLASLEQVE 165
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL- 186
FIH+SAL A + Y ++ R+K +GE+ V + FP ATIFRP+D++G D+FL
Sbjct: 166 HFIHVSALPAYSKANSEYPE--DRWSRSKIEGERLVRQAFPRATIFRPADIWGMEDRFLA 223
Query: 187 RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRY 245
R + R F + +G ++ QPV+V DVA AIV++ ++P++ AGK Y+ GP+
Sbjct: 224 RIATSLSRLGFVPVV---QGGKSRTQPVWVDDVARAIVSSVRNPESTAGKTYELFGPRVL 280
Query: 246 LLSELLDWFHVVMKK 260
E++++ K+
Sbjct: 281 TRREVVEFVADSTKR 295
>gi|354547401|emb|CCE44136.1| hypothetical protein CPAR2_503600 [Candida parapsilosis]
Length = 384
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 154/277 (55%), Gaps = 24/277 (8%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V++ G GGRSS G ATVFGASG++G YL +KL + G+ I+P+R + R L++
Sbjct: 35 KVNVSVGPGGRSSRTGYTATVFGASGFLGRYLVSKLARHGTTTIVPFRDDMKK-RFLKVA 93
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F RN I+ ++ +S++VIN IG ++ TKNFT+AD N+ + R+A+ +K
Sbjct: 94 GDLGVVNFVEIDARNLQSIQDSVAHSDIVINCIGADYNTKNFTMADVNIALAERIAQATK 153
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+ GV ++IH+S+ NADP S FY TK GE+ V P++TI RPS M+G
Sbjct: 154 DAGVPRYIHVSSYNADP-------KSESIFYATKGIGEQVVRDIIPDSTIVRPSQMFGRE 206
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D L Y G MW + +Y PV+V DVA A+ D G++Y+
Sbjct: 207 DNLLNYLGPKIKMWTPNRNQKQIY---------PVHVLDVARALEKIAYDDSTVGQLYEL 257
Query: 240 VGPKRYLLSELLDWFHVVMKK----GEPDYGYYRYDL 272
GP++ ++ H + + G Y +Y YDL
Sbjct: 258 YGPEKLSYLDIRQMIHGITENYAQAGPISYNFYDYDL 294
>gi|448528158|ref|XP_003869675.1| membrane protein [Candida orthopsilosis Co 90-125]
gi|380354028|emb|CCG23542.1| membrane protein [Candida orthopsilosis]
Length = 384
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 154/277 (55%), Gaps = 24/277 (8%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V+L G GGRSS G ATVFGASG++G YL +KL + G+ I+PYR + R L++
Sbjct: 35 KVNLSVGPGGRSSRTGYTATVFGASGFLGRYLVSKLARHGTTTIVPYRDDLKK-RFLKVA 93
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F RN I+ ++ +S++VIN IG ++ TKNF++AD N+ + R+A+ +K
Sbjct: 94 GDLGVVNFVEIDARNLQSIQDSVAHSDIVINCIGADYNTKNFSMADINIALAERIAQATK 153
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+ GV ++IH+S+ NADP S FY TK GE+ V P++TI RPS M+G
Sbjct: 154 DAGVPRYIHVSSYNADP-------KSESVFYATKGVGEQVVRDIIPDSTIVRPSQMFGRE 206
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D L Y G MW + +Y PV+V DVA A+ D G++Y+
Sbjct: 207 DNLLNYLGPKIKMWTPNRNQKQIY---------PVHVLDVARALEKIAYDDSTTGQLYEL 257
Query: 240 VGPKRYLLSELLDWFHVVMKK----GEPDYGYYRYDL 272
GP++ ++ H + + G Y ++ YDL
Sbjct: 258 YGPEKLSYLDIRQMIHGITENYAQAGPISYNFHDYDL 294
>gi|219111161|ref|XP_002177332.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411867|gb|EEC51795.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 397
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 156/273 (57%), Gaps = 25/273 (9%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
+ G+GG SS GV +FGASG++G+Y+C +LG G + RG+ ++R L++ DLG
Sbjct: 42 EAGSGGHSSEAGVKVALFGASGFLGNYVCGELGANGFMAYLANRGDDMEMRHLKIPFDLG 101
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFAT---------------KNFTIADANV 111
+ FQ Y PR+ D I++ I+ ++VV+N+IG+ + + N++ ADANV
Sbjct: 102 RTRFQFYSPRDRDSIKEVIQDADVVVNMIGKYYESGQPIQTAKFPYVGYRTNYSFADANV 161
Query: 112 EIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEAT 171
EIP LA + EM V+ F+H+S+ +A P+ S++ RTKY GE+ + +P AT
Sbjct: 162 EIPRTLAEICLEMQVDHFVHVSSASASPD-------ARSEWSRTKYAGEQAIKEVYPWAT 214
Query: 172 IFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD 231
I RP+ +G D+FL ++ M + + ++ G +T+ QPV+ GDVA I+ C +P
Sbjct: 215 IIRPTQFFGKQDRFLHWFARMAK--WYRIVPLVDGGKTLTQPVWAGDVAKTILKVCDNPS 272
Query: 232 A-AGKIYQAVGPKRYLLSELLDWFHVVMKKGEP 263
G+ GP + SEL D+ + + ++ P
Sbjct: 273 IFEGRQIDCFGPAEFSYSELADFVNDITERNRP 305
>gi|291232472|ref|XP_002736180.1| PREDICTED: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex,
9-like [Saccoglossus kowalevskii]
Length = 253
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 140/210 (66%), Gaps = 10/210 (4%)
Query: 8 KGTGGRSSFNGVVATVFGAS-GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
+G GGRSSF+GV+ATVFG S G++G Y+ N+LG++GSQII+PYR + D+R L++ GDLG
Sbjct: 50 RGRGGRSSFSGVIATVFGGSTGFVGRYVINRLGREGSQIIVPYRCDPDDIRHLKVMGDLG 109
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV 126
Q++ + +DD +R+ +++SNVVINL+G+++ T+N+ D +++I R+A ++ E+ +
Sbjct: 110 QIIPLTFDVNSDDSLREMMQHSNVVINLMGKDYETRNYRFEDIHIDIAGRVASIASELKI 169
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
+ IH+SAL +D P S+F RTK GE V E+P TI RP+ +YG D++
Sbjct: 170 PRLIHLSALGSDWKSP-------SKFLRTKAAGETIVKNEYPNVTILRPAQIYGREDRYF 222
Query: 187 RYYGHMWRHVFRKLAVYKKGEETIKQPVYV 216
Y + F + +Y G + +KQP+YV
Sbjct: 223 NDYAN--HRFFGGVPLYPGGTKAVKQPLYV 250
>gi|167530378|ref|XP_001748148.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773268|gb|EDQ86909.1| predicted protein [Monosiga brevicollis MX1]
Length = 377
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 136/221 (61%), Gaps = 8/221 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFG++G++G Y+ N+LG GSQ+++PYRG+ +D R LR+ GDLGQ
Sbjct: 18 GPGGRSSVSGIVATVFGSTGFLGRYVVNRLGGTGSQVVLPYRGDEHDWRHLRVTGDLGQT 77
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
F P+ + + KA+KYS+VVINLIG+ +++F ++D +VE + + GVE
Sbjct: 78 HFLPFQLLDRASVEKAMKYSDVVINLIGQSCDSRHFALSDVHVEGARIIGEAAAASGVET 137
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
IH+S++NAD + FY+TK GE+ V FP+A I RPSD+ G D+FL
Sbjct: 138 LIHVSSMNADADSEC-------DFYKTKALGEEAVRSAFPDAIIVRPSDVIGFEDRFLNR 190
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229
+ WR G + K+PV+ DVA I+AA +
Sbjct: 191 FAE-WRSFPLTGQPLFDGGKATKRPVFSLDVADGIIAAASN 230
>gi|302846108|ref|XP_002954591.1| NADH:ubiquinone oxidoreductase 39 kDa subunit [Volvox carteri f.
nagariensis]
gi|300260010|gb|EFJ44232.1| NADH:ubiquinone oxidoreductase 39 kDa subunit [Volvox carteri f.
nagariensis]
Length = 395
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
K G GGRSS +GVVATVFG++G++GSY+ N+L K GSQ++ P+R + L+ GDLG
Sbjct: 40 KHGPGGRSSVSGVVATVFGSNGFVGSYIVNELAKCGSQVVCPFRSTENEAMHLKQMGDLG 99
Query: 67 QVLFQP-YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
QV+ P RND+ I++AI SNVVIN +G T N++ D +V+ P RLA+++ E G
Sbjct: 100 QVVLLPELDIRNDEHIKRAISRSNVVINCVGMRLQTMNWSFEDVHVDFPKRLAKIAAESG 159
Query: 126 -VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
V++ IH S + AD N S+ RTK G++ +L FP ATI RP D+ G D
Sbjct: 160 HVDRLIHFSDMGADVN-------HKSKRMRTKALGDEALLEAFPSATIMRPGDIVGIEDH 212
Query: 185 FLRYYGHMWRHVFRKLA-VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
F Y +++ A V + G + QP YV DVA A+ +A + P++ G+ Y GP+
Sbjct: 213 FYNYL--IYQLTLTVFAPVVETGSNKL-QPTYVLDVADAVTSALRKPESKGQTYYLGGPE 269
Query: 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLF------INGLFPGYPM 293
+ E+ D ++ +R D + P +K + PG PM
Sbjct: 270 VLTVREVYDLLLKTLR-------IHRDDTWHLPAWIVKAMYKPMDSVRRKLPGLPM 318
>gi|255571168|ref|XP_002526534.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus
communis]
gi|223534095|gb|EEF35812.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus
communis]
Length = 394
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 177/287 (61%), Gaps = 13/287 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G+VATVFGA+G++G Y+ +L K GSQ+++P+RG+ R L+L GDL
Sbjct: 54 VRKGTGGRSSVSGIVATVFGATGFLGRYVVQRLAKMGSQVLVPFRGSEDSHRHLKLMGDL 113
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y+PR++ I+ + +NVVINLIGRE+ T+N++ + N + +LA ++KE
Sbjct: 114 GQIVPMKYNPRDEASIKAVMAKANVVINLIGREYETRNYSFEEVNHGMAEQLAMIAKEHG 173
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ ++I +S L + S S+ R K E+ VLRE PEAT+ +P+ M G+ D+
Sbjct: 174 GIMRYIQVSCLGS-------SSSSPSRMLRAKAAAEEAVLREIPEATVMKPAAMIGTEDR 226
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPK 243
L + H + + L ++ G + QPVYV DVAAAI+AA KD ++ GKIY+ GP+
Sbjct: 227 ILNKWAHFVKK-YSFLPLFGDGSTKL-QPVYVVDVAAAIIAALKDDGSSMGKIYELGGPE 284
Query: 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGL-FP 289
+ EL + ++++ P Y + + P ++ IN + FP
Sbjct: 285 ILTVHELAEIMFDMIREW-PRYVKVPFPIAKAIATPREVLINKVPFP 330
>gi|149245847|ref|XP_001527396.1| hypothetical protein LELG_02225 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449790|gb|EDK44046.1| hypothetical protein LELG_02225 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 417
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 149/277 (53%), Gaps = 24/277 (8%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V++ G GGRSS G TVFGASG++G YL +KL + G+ I+PYR + R L++
Sbjct: 68 KVNVSVGPGGRSSRTGYTVTVFGASGFLGRYLVSKLARHGTTTIVPYRDDMKK-RFLKVA 126
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F RN I ++ +S+VVIN IG ++ TKNF++AD N+ + R+AR ++
Sbjct: 127 GDLGVVNFVEIDARNLQSIEDSVAHSDVVINCIGVDYDTKNFSMADVNIALAERIARATR 186
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+ GV +F+H+S+ NADP S FY TK GE+ V P ATI RP+ M+G
Sbjct: 187 DAGVPRFVHVSSYNADP-------KSDSVFYATKGIGEQRVKEIIPSATIVRPAQMFGRE 239
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D L Y G MW + +Y PVYV DVA A+ D GK Y+
Sbjct: 240 DNLLNYLGPNIKMWTPNKNQKEIY---------PVYVLDVARALEKITYDDTTMGKTYEL 290
Query: 240 VGPKRYLLSELLDWFHVVMKK----GEPDYGYYRYDL 272
GP++ E+ H + + G Y + Y+L
Sbjct: 291 YGPEKLSYHEIRTMIHGITENFAMAGPFTYNFADYNL 327
>gi|344230956|gb|EGV62841.1| NADH dehydrogenase 1 alpha subcomplex 9 [Candida tenuis ATCC 10573]
gi|344230957|gb|EGV62842.1| hypothetical protein CANTEDRAFT_115754 [Candida tenuis ATCC 10573]
Length = 394
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 148/256 (57%), Gaps = 20/256 (7%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V++ G GGRSS G VATVFGASG++G Y+ +KL K G+ +++P+R N R L++
Sbjct: 44 KVNVSVGPGGRSSRTGYVATVFGASGFLGRYVTSKLAKHGTVVVVPFR-NEMKKRFLKVT 102
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F + PRN I++++ +S++V N +G ++ TKNF++AD N+ I R+A+ K
Sbjct: 103 GDLGVVNFVEWDPRNIKSIQESVAHSDIVFNCVGADYHTKNFSMADVNIGITERIAQAVK 162
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
E G +FIH+S+ NA+PN S FY TK GE+ V P+ATI RPS YG
Sbjct: 163 EAGNPRFIHVSSYNANPN-------SKSVFYATKGVGEQIVRDLVPDATIVRPSPTYGRE 215
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D L Y G MW + +E PV+V DVA A+ D GK ++
Sbjct: 216 DNLLNYLGPKLKMW-------TPNRNAKEV--HPVHVLDVARALEKIGYDDSTVGKTFEL 266
Query: 240 VGPKRYLLSELLDWFH 255
GP++Y E+ + H
Sbjct: 267 YGPEKYSFREIREMIH 282
>gi|344300963|gb|EGW31275.1| NADH dehydrogenase 1 alpha subcomplex 9 [Spathaspora passalidarum
NRRL Y-27907]
Length = 384
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 167/307 (54%), Gaps = 26/307 (8%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V+L GTGGRSS NG TVFGA+G++G Y+ +KL + G+ ++P+R + R L++
Sbjct: 34 KVNLSVGTGGRSSRNGYTVTVFGAAGFLGRYVTSKLARHGTTTVVPFRNDMKK-RFLKVQ 92
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F + RN ++ ++ +S+VVIN IG ++ TKNF++AD N+ I R+ + +K
Sbjct: 93 GDLGVVNFVEFDSRNLQSVQDSVAHSDVVINCIGADYNTKNFSMADVNIAIAERITQATK 152
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+ V + IH+S+ NA+P S FY TK GE+ V +PEATI RP+ MYG
Sbjct: 153 DANVPRLIHVSSYNANPK-------SESVFYATKGIGEQVVKSIYPEATIVRPAPMYGRE 205
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D L Y G MW VY P +V DVA I A D AGK ++
Sbjct: 206 DNLLNYLGPKIKMWTPNRNAKLVY---------PTHVLDVARGIEAMTFDDSTAGKTFEL 256
Query: 240 VGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRY-DPVMPLKL--FINGLFPGYPMGHL 296
P++ +E+ H + + + G Y Y R+ D V+PL+L FI L
Sbjct: 257 YHPEQLSFAEIRQLIHGITEDYS-EVGPYTY--RFGDHVIPLQLAKFIAELKQVVFWKQT 313
Query: 297 TPERVER 303
P++++R
Sbjct: 314 NPDQIQR 320
>gi|307110188|gb|EFN58424.1| hypothetical protein CHLNCDRAFT_34039 [Chlorella variabilis]
Length = 415
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 160/260 (61%), Gaps = 15/260 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LK G GGRSS +G+ AT+FG SG++G Y+ N +G G Q+++P+R + DV+ LR GDL
Sbjct: 54 LKSGPGGRSSVSGITATIFGCSGFLGRYVANAIGNTGGQLVLPHRCDDTDVQHLRTMGDL 113
Query: 66 GQVLFQP-YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM 124
GQV+ P + R+++ +R+AI SN+V+N++G T N+ + ++E PARLAR ++
Sbjct: 114 GQVVMMPDFSIRDEEAVRRAISRSNLVVNMVGAGQETWNYGFEEVHIEWPARLARAIRDS 173
Query: 125 G-VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREF-PEATIFRPSDMYGSG 182
G VE+FIH+SAL A+ + P S+ RTK G++ V E P +TIF+P+ + G+
Sbjct: 174 GKVERFIHLSALGAEADAP-------SRRLRTKAAGDEVVRSELGPISTIFKPAAVSGTE 226
Query: 183 DKFLRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
D+ + M + F L G +T QPV+V DVAAAI+ + K D+ G+ Y G
Sbjct: 227 DRLFNMFATMAKRTPFLPLI---DGGKTRMQPVWVRDVAAAIMNSLKTYDSLGQTYYLAG 283
Query: 242 PKRYLLSELLDW-FHVVMKK 260
P +++L+ + +H + ++
Sbjct: 284 PDVMTVAQLVAFTYHTIRER 303
>gi|392572330|gb|EIW65481.1| hypothetical protein TREMEDRAFT_72592 [Tremella mesenterica DSM
1558]
Length = 411
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 144/249 (57%), Gaps = 17/249 (6%)
Query: 6 LKKG--TGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG 63
+K+G TGGRSS +G V TVFG +G++G Y K+ KQG+Q+I+PYR + R LR+ G
Sbjct: 45 IKRGPPTGGRSSVSGNVVTVFGCTGFLGRYTVAKIAKQGAQVIVPYRDE-DEKRHLRVMG 103
Query: 64 DLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKE 123
DLGQ++ + RN D+I + +K+S+ V NL GR++ TKNFT D NV+ +AR++ +
Sbjct: 104 DLGQIVPMEWDARNPDQIYECVKHSDTVYNLAGRDWETKNFTFEDINVKAAGLIARVAAQ 163
Query: 124 MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGD 183
V + IH+S LNA P S S+FYRTKY GE+ V FPEATI RP+ MYG+ D
Sbjct: 164 ANVPRLIHVSHLNASP-------SSTSEFYRTKYAGERAVREAFPEATIVRPAGMYGAED 216
Query: 184 KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-DAAGKIYQAVGP 242
L + L + +G I PV+V DVA+A+ P + + GP
Sbjct: 217 WLLNAIAQ-----YPILFKFNQGRTKI-LPVHVLDVASALSVMLTAPVTSVASTFALPGP 270
Query: 243 KRYLLSELL 251
+ + L
Sbjct: 271 AMHTFNSLF 279
>gi|345568304|gb|EGX51201.1| hypothetical protein AOL_s00054g577 [Arthrobotrys oligospora ATCC
24927]
Length = 382
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 140/240 (58%), Gaps = 14/240 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G ATVFGA+G++G Y+ N+L + G ++IPYR + R L++ GDLG++ F
Sbjct: 46 GGRSSLGGHTATVFGAAGFLGRYIVNRLARTGCNVVIPYREEMWK-RHLKVTGDLGRITF 104
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
+ RN + I +++++S++VINLIGR++ TKNF D +VE R+A + ++++I
Sbjct: 105 LEFDLRNTESIEESVRHSDIVINLIGRDYETKNFNFWDVHVEGTQRIAEAVAKYDIDRYI 164
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ NAD N P S FYRTK +GE E FPE TI RP+ ++G D+ L +
Sbjct: 165 HVSSHNADLNSP-------SAFYRTKAEGELEARAIFPETTIVRPARVWGEEDRLLLF-- 215
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
H ++ + + +PV+ DV A+ D G+ Y+ GPK Y + E+
Sbjct: 216 ----HAQKRYLITSNNLQERFRPVHSIDVGRALERIAYDDSTVGQTYELFGPKEYSMGEI 271
>gi|440638429|gb|ELR08348.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
[Geomyces destructans 20631-21]
Length = 381
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 141/245 (57%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ N+L +QG +IIPYR R L++ GDLG+
Sbjct: 44 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLARQGCTVIIPYREEMAK-RHLKVTGDLGR 102
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN + + +++++S++V NL+GR + TKNF + D +VE R+A + V+
Sbjct: 103 VIFMEYDLRNTESLEESVRHSDIVYNLVGRSYPTKNFDLEDVHVEGAERIADAVAKYDVD 162
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+F+H+S+ NAD N S+FYRTK +GE V FPE TI RP+ M+G D+ L
Sbjct: 163 RFVHVSSYNADAN-------STSEFYRTKARGESVVRSIFPETTIVRPAPMFGFEDRLLH 215
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ L EE K PV+V DV A+ D A + Y+ GPK Y
Sbjct: 216 KLAGVT-----NLLTSNNMEERYK-PVHVIDVGHALERMLNDDSTASQTYELFGPKDYST 269
Query: 248 SELLD 252
+E+ +
Sbjct: 270 AEIAE 274
>gi|388852305|emb|CCF54116.1| probable NADH2 dehydrogenase (ubiquinone) 40K chain [Ustilago
hordei]
Length = 392
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 146/245 (59%), Gaps = 21/245 (8%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS +G V TVFG +G++G Y+ N+L ++GSQ+IIPYR + + R L++ GDLGQV+
Sbjct: 58 GGRSSVSGHVVTVFGCTGFLGRYVVNRLAQKGSQVIIPYR-DEDEKRHLKVMGDLGQVVP 116
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
+ RND++I + +++S+VV NL GR + TKNFT D + R+A++++ GV +FI
Sbjct: 117 MEWDLRNDEQIEECVRHSDVVYNLTGRHYETKNFTFNDVHATGAQRIAQIAEAAGVGRFI 176
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR--- 187
H+S LNAD N P S F R+K +GE V R F ATI RP M+G D+FL
Sbjct: 177 HVSHLNADANSP-------SAFLRSKAEGEAAVKRAFEGATIVRPGTMWGHEDRFLNQMA 229
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK-DPDAAGKIYQAVGPKRYL 246
Y + WR G +T +PV+ DVA A+ + D + G + GPK Y
Sbjct: 230 VYPYAWR--------VNHG-QTRMRPVHSLDVAHALEKMLEADVTSMGATFSLAGPKEYT 280
Query: 247 LSELL 251
+ ++L
Sbjct: 281 IGQIL 285
>gi|353235792|emb|CCA67799.1| probable NADH2 dehydrogenase (ubiquinone) 40K chain [Piriformospora
indica DSM 11827]
Length = 365
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 139/245 (56%), Gaps = 20/245 (8%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GRS+ G VATVFG +G++G YL KL K G+Q+I+PYR R LR GDLGQ+
Sbjct: 33 GPPGRSAVTGHVATVFGCTGFLGRYLVAKLAKNGTQVIVPYRDENTK-RHLRPMGDLGQI 91
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ RN +I +A+++S++V NLIGR++ TKNF A N A +AR+S E GV +
Sbjct: 92 VPLELDIRNPQQIEEAVRHSDIVYNLIGRDYETKNFDFASVNKMGAADIARISAESGVPR 151
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR- 187
+H+S +NA + P S+FYRTK +GE V FP A I RPS MYG DKFL
Sbjct: 152 LVHVSHINAAADSP-------SKFYRTKKEGEDAVREAFPSAIIARPSQMYGPEDKFLNS 204
Query: 188 --YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
Y+ +W+ + KG +T +PVYV DVA + P+ G GP +
Sbjct: 205 MAYWPMLWK--------FNKG-KTQTRPVYVQDVAQGLANLSSLPELDGSTLSLPGPVTF 255
Query: 246 LLSEL 250
+EL
Sbjct: 256 SYTEL 260
>gi|18399328|ref|NP_565469.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Arabidopsis
thaliana]
gi|75206396|sp|Q9SK66.2|NDUA9_ARATH RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; Flags: Precursor
gi|14334734|gb|AAK59545.1| putative NADH-ubiquinone oxireductase [Arabidopsis thaliana]
gi|15293277|gb|AAK93749.1| putative NADH-ubiquinone oxireductase [Arabidopsis thaliana]
gi|20197857|gb|AAD21752.2| putative NADH-ubiquinone oxireductase [Arabidopsis thaliana]
gi|49660121|gb|AAT68351.1| hypothetical protein At2g20360 [Arabidopsis thaliana]
gi|60547713|gb|AAX23820.1| hypothetical protein At2g20360 [Arabidopsis thaliana]
gi|330251903|gb|AEC06997.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Arabidopsis
thaliana]
Length = 402
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 162/261 (62%), Gaps = 16/261 (6%)
Query: 5 HL-KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG 63
HL +KGTGGRSS +G+VATVFGA+G++G YL +L K GSQ+++P+RG+ R L+L G
Sbjct: 54 HLARKGTGGRSSVSGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMG 113
Query: 64 DLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKE 123
DLGQV+ + PR++D I+ + +NVVINLIGRE+ T+NF+ DAN I +LA ++KE
Sbjct: 114 DLGQVVPMKFDPRDEDSIKAVMAKANVVINLIGREYETRNFSFEDANHHIAEKLALVAKE 173
Query: 124 M-GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
G+ ++I +S L A +S S+ R K E+ VL PEATI RP+ M G+
Sbjct: 174 HGGIMRYIQVSCLGAS-------VSSPSRMLRAKAAAEEAVLNALPEATIMRPATMIGTE 226
Query: 183 DKFLRYYGHMWRHVFRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQA 239
D+ L + W +K G T QPVYV DVAAAIVAA KD ++ GK Y+
Sbjct: 227 DRIL----NPWSMFVKKYGFLPLIGGGTTKFQPVYVVDVAAAIVAALKDDGSSMGKTYEL 282
Query: 240 VGPKRYLLSELLDWFHVVMKK 260
GP + EL + + ++++
Sbjct: 283 GGPDVFTTHELAEIMYDMIRE 303
>gi|297832628|ref|XP_002884196.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330036|gb|EFH60455.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata]
Length = 402
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 162/261 (62%), Gaps = 16/261 (6%)
Query: 5 HL-KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG 63
HL +KGTGGRSS +G+VATVFGA+G++G YL +L K GSQ+++P+RG+ R L+L G
Sbjct: 54 HLARKGTGGRSSVSGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMG 113
Query: 64 DLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKE 123
DLGQV+ + PR++D I+ + +NVVINLIGRE+ T+NF+ DAN I +LA ++KE
Sbjct: 114 DLGQVVPMKFDPRDEDSIKAVMAKANVVINLIGREYETRNFSFEDANHHIAEKLALVAKE 173
Query: 124 M-GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
G+ ++I +S L A + P S+ R K E+ VL PEAT+ RP+ M G+
Sbjct: 174 HGGIMRYIQVSCLGASASSP-------SRMLRAKAAAEEAVLNALPEATVMRPATMIGTE 226
Query: 183 DKFLRYYGHMWRHVFRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQA 239
D+ L + W +K G T QPVYV DVAAAIVAA KD ++ GK Y+
Sbjct: 227 DRIL----NPWSMFVKKYGFLPLIGGGTTKFQPVYVVDVAAAIVAALKDDGSSMGKTYEL 282
Query: 240 VGPKRYLLSELLDWFHVVMKK 260
GP + EL + + ++++
Sbjct: 283 GGPDVFTTHELAEIMYDMIRE 303
>gi|71003724|ref|XP_756528.1| hypothetical protein UM00381.1 [Ustilago maydis 521]
gi|46095692|gb|EAK80925.1| hypothetical protein UM00381.1 [Ustilago maydis 521]
Length = 392
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 148/245 (60%), Gaps = 21/245 (8%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS +G V TVFG +G++G Y+ N+L ++GSQ+I+PYR + + R L++ GDLGQV+
Sbjct: 58 GGRSSVSGHVVTVFGCTGFLGRYVVNRLAQKGSQVIVPYR-DEDEKRHLKVMGDLGQVVP 116
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
+ R+D++I + +++S+VV NL GR + TKNFT D +V R+A++++ GV +FI
Sbjct: 117 MEWDLRHDEQIEECVRHSDVVYNLTGRHYETKNFTFNDVHVTGAQRIAQIAEASGVGRFI 176
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR--- 187
H+S LNAD N P S F R+K +GE V R F ATI RP M+G D+FL
Sbjct: 177 HVSHLNADANSP-------SAFLRSKAEGEAVVKRAFEGATIVRPGTMWGHEDRFLNQMA 229
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK-DPDAAGKIYQAVGPKRYL 246
Y + WR +G+ ++ PV+ DVA A+ + D + G + GPK Y
Sbjct: 230 VYPYAWR--------VNQGQTKMR-PVHSLDVAHALEKMLEADVTSMGATFSLAGPKEYT 280
Query: 247 LSELL 251
+ ++L
Sbjct: 281 IGQIL 285
>gi|126132938|ref|XP_001382994.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9
[Scheffersomyces stipitis CBS 6054]
gi|126094819|gb|ABN64965.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9
[Scheffersomyces stipitis CBS 6054]
Length = 386
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 167/307 (54%), Gaps = 26/307 (8%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V++ G+GGRSS G ATVFGA+G++G YL +KL + G+ I+P+R + R L++
Sbjct: 38 KVNVAIGSGGRSSRTGYTATVFGATGFLGRYLTSKLARHGTTTIVPFRDDMKK-RFLKVT 96
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F + RN I ++ +S++V N IG ++ TKNF++AD N+ I R+A+ +K
Sbjct: 97 GDLGVVNFVEFDARNVKSIADSVAHSDIVFNCIGADYETKNFSMADVNISITERIAQATK 156
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
E GV +F+H+S+ NA+P S FY TK GE+ V P ATI RPS MYG
Sbjct: 157 EAGVPRFVHVSSYNANPK-------SESIFYATKGIGEQVVRDIIPSATIVRPSPMYGRE 209
Query: 183 DKFLRYYGHMWRHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
D L Y G KL ++ G+ + + P YV DVA A+ D AG+ Y+ G
Sbjct: 210 DNLLNYLGP-------KLKMWTPGKNSKEIYPTYVLDVARALEKIGYDDSTAGQTYELYG 262
Query: 242 PKRYLLSELLDWFHVVMKK----GEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLT 297
++ E+ H + + G Y + Y+L +P+ + L P LT
Sbjct: 263 SEKLSFLEIRQMIHGITQDFSNAGPLSYNFADYNLP----LPIAKLVAQL-KQLPYWKLT 317
Query: 298 -PERVER 303
P++V+R
Sbjct: 318 NPDQVQR 324
>gi|323507922|emb|CBQ67793.1| probable NADH2 dehydrogenase (ubiquinone) 40K chain [Sporisorium
reilianum SRZ2]
Length = 392
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 148/245 (60%), Gaps = 21/245 (8%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS +G V TVFG +G++G YL N+L ++G+Q+IIPYR + + R L++ GDLGQ++
Sbjct: 58 GGRSSVSGHVVTVFGCTGFLGRYLVNRLAQKGTQVIIPYR-DEDEKRHLKVMGDLGQIVP 116
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
+ R+D++I + +++S+VV NL+GR + TKNFT D +V R+A++++ GV +FI
Sbjct: 117 MEWDLRHDEQIEECVRHSDVVYNLVGRHYETKNFTFNDVHVTGAQRIAQIAESAGVGRFI 176
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR--- 187
H+S LNAD N P S F R+K +GE V R F ATI RP ++G D+FL
Sbjct: 177 HVSHLNADANSP-------SAFLRSKAEGEAVVKRAFEGATIVRPGTLWGHEDRFLNQMA 229
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK-DPDAAGKIYQAVGPKRYL 246
Y + WR G+ ++ PV+ DVA A+ + D + G + GPK Y
Sbjct: 230 VYPYAWR--------VNHGQTKMR-PVHSFDVAHALEKMLEADVTSMGATFSLAGPKEYT 280
Query: 247 LSELL 251
+ ++L
Sbjct: 281 IGQIL 285
>gi|428185018|gb|EKX53872.1| hypothetical protein GUITHDRAFT_160957 [Guillardia theta CCMP2712]
Length = 381
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 10/244 (4%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLCGDLGQVL 69
GGRSS GVVATVFG++G++ Y+ NKLG+ G+Q ++P+R D R L++ GDLG ++
Sbjct: 29 GGRSSVTGVVATVFGSTGFVARYVVNKLGRVGTQCVVPHRIYSEDRGRHLKVMGDLGMIV 88
Query: 70 FQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129
P+H R+ + I + +K S+VVINL+G++ T NF +NVE + LA++SKE GV +F
Sbjct: 89 PMPFHARDPESIAECVKESDVVINLMGKQEKTFNFDFFGSNVEAVSTLAKISKECGVPRF 148
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
IH+S++ AD + ++ R K GEK VL +P A I R + ++G DKFL
Sbjct: 149 IHLSSVAADEQSESTWL-------RCKALGEKAVLDYYPNAAILRSNVIFGEEDKFLNNM 201
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
W ++ + + G + I P+YV DVA AI A D G+I + GP+ + L +
Sbjct: 202 AK-WARIYGYVPIIGSG-KNIVHPIYVDDVAEAIRACTYDDSYDGQIVELNGPEAWTLPD 259
Query: 250 LLDW 253
+ +W
Sbjct: 260 IANW 263
>gi|50551529|ref|XP_503238.1| YALI0D24585p [Yarrowia lipolytica]
gi|49649106|emb|CAG81439.1| YALI0D24585p [Yarrowia lipolytica CLIB122]
Length = 375
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 148/255 (58%), Gaps = 13/255 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ KGTGGRSS G ATVFGA+G++GSYL KL K G+ +++PYR R L++ GDL
Sbjct: 41 IAKGTGGRSSRTGYTATVFGANGFLGSYLTAKLAKHGTTVVVPYREEMAK-RHLKVTGDL 99
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
G V F RN + I +A+++S++V+NLIGRE+ TKNF D +VE R+A K+
Sbjct: 100 GVVNFLEMDLRNLESIDEAVRHSDIVVNLIGREYETKNFNYYDVHVEGARRIAEAVKKHN 159
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
+ ++IH+SA NA+ + P S+F TK GE+ P ATI RP+ M+G DK+
Sbjct: 160 IARYIHVSAFNAEIDSP-------SEFNHTKGLGEQVTKDIVPWATIVRPAPMFGREDKW 212
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
+ M R L K +ET PV+V DVAAA+ C D + ++ GP+++
Sbjct: 213 --FLDRMARSPC--LVSANKFQET-SNPVHVIDVAAALERICFDDSTVAQTFELYGPQKF 267
Query: 246 LLSELLDWFHVVMKK 260
+++D ++K
Sbjct: 268 TQKQIIDMVSETLRK 282
>gi|281202903|gb|EFA77105.1| NADH dehydrogenase 1 alpha subcomplex subunit 9 [Polysphondylium
pallidum PN500]
Length = 369
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 141/243 (58%), Gaps = 12/243 (4%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
R+ +G+VATVFG +G+ G Y+ L K G Q+++PYRG Y RDL++ G+LGQ++
Sbjct: 45 ASRTHSSGLVATVFGVTGFTGRYIVQLLTKSGIQVVVPYRGEDYSFRDLKVLGELGQIIP 104
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
Y R+ D I +A+ +SN+VIN+I R + T+NF+ D N++ ++A+LSK + +EK++
Sbjct: 105 VRYDIRDQDSIERAMSHSNIVINMISRNYETRNFSFEDVNIDAATKIAKLSKSLDIEKYV 164
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+SALNA S++ RTK GEK V P TI RPS M+G D+ +
Sbjct: 165 HVSALNASE-------ESASKWSRTKAVGEKAVKEILPNCTIVRPSIMFGDEDRLI---- 213
Query: 191 HMWRHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
+ W V + E +K QP++ D A A+++ + AAGK Y+ G + + +
Sbjct: 214 NKWSRVVAFSPFIPRYNEDLKFQPLHCVDFANAMMSILELQSAAGKTYELGGDEIFAWGQ 273
Query: 250 LLD 252
LD
Sbjct: 274 FLD 276
>gi|331237468|ref|XP_003331391.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
gi|309310381|gb|EFP86972.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
Length = 386
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 145/259 (55%), Gaps = 14/259 (5%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V G GR S G+VATVFGA+G++G YL +KL KQG+Q+I+PYR R LR+
Sbjct: 43 KVIQSSGPSGRHSNTGLVATVFGATGFLGRYLVHKLAKQGTQVIVPYRDE-DSKRHLRVM 101
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLGQ++ + N+ I + +++S+VV NL+GRE TKN++ +E +++ R++K
Sbjct: 102 GDLGQIVPLEFDLENEGFINECVRHSHVVYNLLGREHETKNYSFDRLFIEGASKITRIAK 161
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
E GV + IH+S LNA + P S+ Y+ K GE V FPEATI +PS M+G
Sbjct: 162 ENGVGRLIHVSHLNASLDSP-------SKLYKAKAAGESVVRDIFPEATIVKPSIMFGQE 214
Query: 183 DKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
D+FL + V + ET+ +PV V DVA A+ AGK ++ GP
Sbjct: 215 DRFLN------KMVTKPFTFQVNRLETLVRPVSVLDVAEAMQLMSTADSTAGKTFELAGP 268
Query: 243 KRYLLSELLDWFHVVMKKG 261
+ Y EL V+ K
Sbjct: 269 RTYTHEELFQVLEVLTHKS 287
>gi|453081096|gb|EMF09146.1| NAD(P)-binding protein [Mycosphaerella populorum SO2202]
Length = 384
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 146/246 (59%), Gaps = 19/246 (7%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G ATVFGA+G++G Y+ N+L + G+ +++P+R R L++ GDLG+V+F
Sbjct: 50 GGRSSLGGHTATVFGATGFLGRYIVNRLARAGNTVVVPFREEMAK-RHLKVTGDLGRVVF 108
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
Y RN I +A+++S++VINL+GR++ TKNF +AD + E R+A + V++FI
Sbjct: 109 IEYDLRNKASIDEAVRHSDIVINLVGRDYPTKNFDLADVHEEGTRRIANAVAKYDVDRFI 168
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ + P+ P S+FYRTK+ GE+ FPE TI RP+ +G D+ L
Sbjct: 169 HVSSHSVAPDSP-------SEFYRTKWNGEQIAREIFPETTIVRPAPAFGFEDRLL---- 217
Query: 191 HMWRHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL-- 247
+ R V+ + +P++ D +A+ C+D + AG+ Y+ GPK Y L
Sbjct: 218 ---HRLARATNVFTANNMQERFRPIHSIDFGSALEVMCQDDNTAGQTYELFGPKEYTLKE 274
Query: 248 -SELLD 252
SEL+D
Sbjct: 275 ISELVD 280
>gi|443896253|dbj|GAC73597.1| NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Pseudozyma
antarctica T-34]
Length = 385
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 146/245 (59%), Gaps = 21/245 (8%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS +G V TVFG +G++G Y+ N+L ++GSQ+IIPYR + + R L++ GDLGQ++
Sbjct: 51 GGRSSVSGHVVTVFGCTGFLGRYVVNRLAQKGSQVIIPYR-DEDEKRHLKVMGDLGQIVP 109
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
+ RND++I + +++S+VV NL GR + TKNF+ D +V R+A++++ GV + I
Sbjct: 110 MEWDLRNDEQIEECVRHSDVVYNLTGRHYETKNFSFNDVHVAGAQRIAQIAESAGVGRLI 169
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR--- 187
H+S LNAD + P S F R+K +GE V R F ATI RP M+G D+FL
Sbjct: 170 HVSHLNADADSP-------SSFLRSKAEGEAAVKRAFEGATIVRPGTMWGHEDRFLNQMA 222
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK-DPDAAGKIYQAVGPKRYL 246
Y + WR G+ ++ PV+ DVA A+ + D + G + GPK Y
Sbjct: 223 VYPYAWR--------VNHGQTKMR-PVHSLDVAQALEKMLEADVTSMGATFSLAGPKEYT 273
Query: 247 LSELL 251
+ ++L
Sbjct: 274 IGQIL 278
>gi|392591619|gb|EIW80946.1| NAD(P)-binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 362
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 148/247 (59%), Gaps = 15/247 (6%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ +GT G S+ +G V TVFG++G++ Y+ +KL +QG+Q+++PYR R L+ GDL
Sbjct: 35 VSQGTPGYSAVSGHVVTVFGSTGFLARYMISKLARQGTQVVVPYREEDTK-RHLKPMGDL 93
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++ + RNDD+I + +++S++V NL+GR++ TKNF D +V+ R+A+++ E+G
Sbjct: 94 GQIVSMEWDLRNDDQIAECLRHSDIVYNLVGRDYETKNFKYDDVHVKGAERIAKIAAEVG 153
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++ +H+S LNA S S FYR+K +GE+ V FP ATI RP+ MYG DKF
Sbjct: 154 VQRLVHVSHLNASS-------SSKSAFYRSKAEGEERVKAAFPNATIIRPAAMYGHEDKF 206
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
+ W ++ KL GE I+ PV+V DVA A+ P G Y GP+
Sbjct: 207 FNNMSN-WP-IWWKL---NHGETKIR-PVHVMDVAQALANLMGTPSMPG-TYSLPGPRTM 259
Query: 246 LLSELLD 252
LLD
Sbjct: 260 TYEYLLD 266
>gi|46397823|sp|P25284.2|NDUA9_NEUCR RecName: Full=NADH-ubiquinone oxidoreductase 40 kDa subunit,
mitochondrial; AltName: Full=Complex I-40kD;
Short=CI-40kD; Flags: Precursor
Length = 375
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 141/243 (58%), Gaps = 14/243 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG ++IP+R Y+ R L++ GDLG+
Sbjct: 41 RNQGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVIPFRDE-YNKRHLKVTGDLGK 99
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+ + RN I +++++S+VV NLIGR++ TKNF+ D ++E R+A + V+
Sbjct: 100 VVMIEFDLRNTQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAEAVAKYDVD 159
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NADPN +F+ TK +GE+ V FPE TI RP+ M+G D+ L
Sbjct: 160 RFIHVSSYNADPN-------SECEFFATKARGEQVVRSIFPETTIVRPAPMFGFEDRLLH 212
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ K + G + PV+V DV A+ D + A + ++ GPK Y
Sbjct: 213 KLASV------KNILTSNGMQEKYNPVHVIDVGQALEQMLWDDNTASETFELYGPKTYTT 266
Query: 248 SEL 250
+E+
Sbjct: 267 AEI 269
>gi|336467425|gb|EGO55589.1| NADH/ubiquinone oxidoreductase [Neurospora tetrasperma FGSC 2508]
gi|350287932|gb|EGZ69168.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
[Neurospora tetrasperma FGSC 2509]
Length = 375
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 141/243 (58%), Gaps = 14/243 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG ++IP+R Y+ R L++ GDLG+
Sbjct: 41 RNQGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVIPFRDE-YNKRHLKVTGDLGK 99
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+ + RN I +++++S+VV NLIGR++ TKNF+ D ++E R+A + V+
Sbjct: 100 VVMIEFDLRNTQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAEAVAKYDVD 159
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NADPN +F+ TK +GE+ V FPE TI RP+ M+G D+ L
Sbjct: 160 RFIHVSSYNADPN-------SECEFFATKARGEQVVRSIFPETTIVRPAPMFGFEDRLLH 212
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ K + G + PV+V DV A+ D + A + ++ GPK Y
Sbjct: 213 KLASV------KNILTSNGMQEKYNPVHVIDVGQALEQMLWDDNTASETFELYGPKTYTT 266
Query: 248 SEL 250
+E+
Sbjct: 267 AEI 269
>gi|378732017|gb|EHY58476.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
[Exophiala dermatitidis NIH/UT8656]
Length = 384
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 143/245 (58%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G TVFGA G++G Y+ N+L ++G+Q++IP+R + R L++ GDLG+
Sbjct: 47 RQQGGRSSLGGHTVTVFGAYGFLGRYIVNRLARRGNQVVIPFRDDMAK-RHLKVSGDLGR 105
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V F + RN I +++++S++V NLIG+ + TKN+++ DANVE R+A + V+
Sbjct: 106 VSFMEFDVRNTQSIEESVRHSDMVFNLIGKNYPTKNYSLWDANVESVERIAEACAKYDVD 165
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NADPN P S+F+R K QGE+ + FPE TI RP+ ++G D L
Sbjct: 166 RFIHVSSYNADPNSP-------SEFFRVKAQGEQVARQLFPETTIVRPAPVFGFEDNLL- 217
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
H V V G + PV+ DV A+ D AG+ ++ GP Y L
Sbjct: 218 ---HRLARVTNLFTV--NGMQERFWPVHAIDVGMALERIGYDDTTAGETFELYGPTNYSL 272
Query: 248 SELLD 252
+E+ +
Sbjct: 273 AEIAE 277
>gi|3046|emb|CAA39695.1| 40 kD subunit of NADH dehydrogenase [Neurospora crassa]
Length = 375
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 141/243 (58%), Gaps = 14/243 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG ++IP+R Y+ R L++ GDLG+
Sbjct: 41 RNQGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVIPFRDE-YNKRHLKVTGDLGK 99
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+ + RN I +++++S+VV NLIGR++ TKNF+ D ++E R+A + V+
Sbjct: 100 VVMIEFDLRNTQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAERVAKYDVD 159
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NADPN +F+ TK +GE+ V FPE TI RP+ M+G D+ L
Sbjct: 160 RFIHVSSYNADPN-------SECEFFATKARGEQVVRSIFPETTIVRPAPMFGFEDRLLH 212
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ K + G + PV+V DV A+ D + A + ++ GPK Y
Sbjct: 213 KLASV------KNILTSNGMQEKYNPVHVIDVGQALEQMLWDDNTASETFELYGPKTYTT 266
Query: 248 SEL 250
+E+
Sbjct: 267 AEI 269
>gi|430813689|emb|CCJ28978.1| unnamed protein product [Pneumocystis jirovecii]
Length = 375
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 153/285 (53%), Gaps = 44/285 (15%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+KKGTGGRSS +G +ATVFGA+G++G Y+ NKL K G+ +IIP+R R L++ GDL
Sbjct: 29 IKKGTGGRSSISGHIATVFGATGFLGRYIVNKLAKHGTTVIIPWRDQDSK-RHLKILGDL 87
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATK-NFTIA-------------DANV 111
GQ++ + RN I +++++SN+V NLIGR++ TK NF I D +V
Sbjct: 88 GQIVMMEFDLRNKTSIEESVRHSNIVYNLIGRDYETKYNFVINRNPPTNNRNFSYKDVHV 147
Query: 112 EIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY-------------- 157
A +A + +++ IHISALNA P S FY+TK
Sbjct: 148 YGAAAIAEACVKYNIDRLIHISALNASITSP-------SHFYKTKVYYKIKEYAKTNNIK 200
Query: 158 -QGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYV 216
GE+ V FPE TI RPS M+G+ D+FL + + + L E I+ P YV
Sbjct: 201 GLGEEIVHNIFPEVTIVRPSIMFGAEDRFLNFLANA-----KILLTINNNRELIR-PTYV 254
Query: 217 GDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF-HVVMKK 260
DVA A+ D G+IY+ GP Y ++E+L H++ ++
Sbjct: 255 KDVAHALELMMFDDSTKGQIYELYGPHEYSIAEVLTMITHIIHRQ 299
>gi|328868176|gb|EGG16556.1| Transcription regulatory protein SNF5 [Dictyostelium fasciculatum]
Length = 1352
Score = 172 bits (436), Expect = 2e-40, Method: Composition-based stats.
Identities = 92/242 (38%), Positives = 143/242 (59%), Gaps = 13/242 (5%)
Query: 13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP 72
R+ +G+VAT+FG +G+ G YL + K G Q+++PYRG Y RDL++ G+LGQV+
Sbjct: 1029 RTHSSGLVATIFGVTGFTGRYLVQMMTKSGIQVVVPYRGEDYSFRDLKVLGELGQVIPVR 1088
Query: 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG-VEKFIH 131
Y RN++ I +AI +SN+VINL GR + T+N+T+ D N++ R+ARLS +MG +E+F+H
Sbjct: 1089 YDIRNEESIERAISHSNIVINLAGRFWPTRNYTLPDINIDAAERIARLSNKMGNIERFVH 1148
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGH 191
+SAL + S++ RTK GEK V P ATI RPS M+G D+ + +
Sbjct: 1149 VSALGVSEDHK-------SEYARTKAVGEKIVRDLIPSATIVRPSLMFGDEDRLI----N 1197
Query: 192 MWRHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
W + + E +K QP++ D A AI++ + GK+Y+ G + + +
Sbjct: 1198 KWSKAIQWAPFVPRYNEDLKFQPLHCVDFAKAIMSILELQTTHGKVYELGGDEIFTWGQF 1257
Query: 251 LD 252
LD
Sbjct: 1258 LD 1259
>gi|164658469|ref|XP_001730360.1| hypothetical protein MGL_2742 [Malassezia globosa CBS 7966]
gi|159104255|gb|EDP43146.1| hypothetical protein MGL_2742 [Malassezia globosa CBS 7966]
Length = 340
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 147/240 (61%), Gaps = 15/240 (6%)
Query: 13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP 72
R+S +G +ATVFGA+G++G YL +KL K G+Q+++PYR + R L+L GDLGQ++
Sbjct: 5 RNSVSGSIATVFGATGFLGRYLVSKLAKVGTQVVVPYRDE-DEKRHLKLLGDLGQIVPLE 63
Query: 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
+ RN+ +I + +++S+ V NL GR +ATKNF++ D +V+ R+A ++ + GV +FIH+
Sbjct: 64 WDIRNEQQIDECLRHSDTVFNLTGRNYATKNFSMRDVHVDGARRIAEIAAQAGVARFIHM 123
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
S L AD + S++ RTK GE V + FP ATI RPS +YG D+FL
Sbjct: 124 SHLMAD-------VDSESEYMRTKALGEDAVRKVFPSATIVRPSSIYGHEDRFLNKMAS- 175
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAA-IVAACKDPDAAGKIYQAVGPKRYLLSELL 251
W ++ +T+ +PV+ DVA A +V + +D A G+ + GPK Y + ELL
Sbjct: 176 WPITWK-----LNNGQTVLRPVHSLDVAEALLVISQQDRLAMGETFSLYGPKAYTIRELL 230
>gi|225560883|gb|EEH09164.1| NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus G186AR]
Length = 386
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 143/245 (58%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ N+L QG +I+PYR R L++ GDLG+
Sbjct: 49 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLASQGCTVIVPYREEMAK-RHLKVTGDLGR 107
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR++ TKNF+ D +V+ AR+A + + V+
Sbjct: 108 VVFMEYDLRNTQSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKYDVD 167
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NAD N P S+F+RTK QGEK FPE TI RP+ M+G D L
Sbjct: 168 RFIHVSSYNADMNSP-------SEFFRTKAQGEKLARMLFPETTIVRPAPMFGFEDNLLH 220
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++F + ++ PV+ DV A+ + G+ Y+ GPK Y
Sbjct: 221 KLAGI-TNLFTSNHMRER-----YWPVHAIDVGHALEKMLFTDSSVGQTYELYGPKNYST 274
Query: 248 SELLD 252
+E+ +
Sbjct: 275 AEIAE 279
>gi|303311063|ref|XP_003065543.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105205|gb|EER23398.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320039348|gb|EFW21282.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Coccidioides
posadasii str. Silveira]
Length = 386
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 142/243 (58%), Gaps = 14/243 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ N+L +QG +I+PYR R L++ GDLG+
Sbjct: 49 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLARQGCTVIVPYREEMAK-RHLKVTGDLGR 107
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR++ TKNFT+ D +VE R+A + V+
Sbjct: 108 VVFMEYDLRNTQSIEESVRHSDVVYNLVGRDYPTKNFTLEDVHVEGTERIAESVAKYDVD 167
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
++IH+S+ NAD N P S+F+RTK QGE FPE TI RP+ M+G D+ L
Sbjct: 168 RYIHVSSYNADLNSP-------SEFFRTKAQGENAAREIFPETTIVRPAPMFGFEDRLLH 220
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++F + ++ PV+ DVA A+ + A + ++ GP Y
Sbjct: 221 KLAGI-TNIFTSNHMQER-----YWPVHAIDVAHALERMLLEEWTASQTFELYGPTNYST 274
Query: 248 SEL 250
+E+
Sbjct: 275 AEI 277
>gi|388581995|gb|EIM22301.1| NAD(P)-binding protein [Wallemia sebi CBS 633.66]
Length = 378
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 140/247 (56%), Gaps = 14/247 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L+ G GGRSS G VATVFG +G++G YL K+ + G+Q+++PYR + R L++ GDL
Sbjct: 38 LRLGPGGRSSTTGHVATVFGCTGFLGRYLVQKIARTGAQVVVPYRDEM-EKRHLKVMGDL 96
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++ + R D+I + +++S+VV NL+GR+ TKNF+ D + ++ + +A ++ + G
Sbjct: 97 GQIVPMEWDARRPDQIAECLRHSDVVYNLVGRDHETKNFSYEDVHTKVASDIASIATQEG 156
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
+E+ IH+S NA + P S FYR K GE V F ATI RPS MYG D+F
Sbjct: 157 IERLIHVSHFNAAHDSP-------SAFYRAKQAGEDLVRENFDGATIVRPSTMYGHEDRF 209
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L+ F +A +T +P +V DVA A+ +G Y GPK Y
Sbjct: 210 LQQMA------FWTIAYKLNNGQTRVKPAHVLDVAEALHKMMTLDPGSGDTYSLPGPKEY 263
Query: 246 LLSELLD 252
+E +D
Sbjct: 264 TYNEAID 270
>gi|168026473|ref|XP_001765756.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682933|gb|EDQ69347.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 162/250 (64%), Gaps = 15/250 (6%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSS +GVVATVFGA+G++G Y+ +L + GSQ+++PYRG + R L+L GDL
Sbjct: 61 VKRGTGGRSSVSGVVATVFGATGFLGRYVVQQLARMGSQVMVPYRGLDEEWRHLKLMGDL 120
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y R++D I+ AI SNV++N IG+E+ T+NF+ D N I R+++L+KE
Sbjct: 121 GQIVPIKYDARDEDSIKAAIANSNVIVNCIGKEYETRNFSFDDVNYGISNRISKLAKEHG 180
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ K++ +S L ADP+ P S+ R+K+ E+ V++ FPEATI R + + G D+
Sbjct: 181 GILKYVQMSCLAADPHSP-------SRLIRSKHAAEEAVMQNFPEATILRTAPLVGVEDR 233
Query: 185 FLRYYGHMWRHVFRKLA-VYKKGEETIK-QPVYVGDVAAAIVAACKDPD-AAGKIYQAVG 241
L + W +KL V G+ K QPV V DVAAA++AA +D + GK ++ G
Sbjct: 234 LL----NRWAIQAKKLPFVPIPGDGLSKLQPVLVVDVAAAVIAAIRDEGFSMGKTFELGG 289
Query: 242 PKRYLLSELL 251
P + ++EL+
Sbjct: 290 PDVFTVNELV 299
>gi|300122936|emb|CBK23943.2| subunit NDUFA9 [Blastocystis hominis]
Length = 373
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 147/256 (57%), Gaps = 19/256 (7%)
Query: 9 GTGGRSSFNGVVATVFGAS-GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
G GGR S + T+FGAS G +G + +L +G +IPYRG +VR L+ GD+G+
Sbjct: 28 GLGGRMSQCPLKVTIFGASTGNLGRSVVYELASRGVTCMIPYRGEGDEVRHLKQSGDVGK 87
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFAT------KNFTIADANVEIPARLARLS 121
V P+HP ++ IR I S++VINL+G+ + T KN+T D N+ P RLA++
Sbjct: 88 VNPIPFHPLDEKSIRDCIGNSDIVINLVGKYYETKNLYLRKNYTFQDVNIYFPERLAKIC 147
Query: 122 KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-FPEATIFRPSDMYG 180
EMG +H+SAL + + S++ RTK +GE EVLRE P A I RP+DM+G
Sbjct: 148 NEMGKTNLLHVSALQQN-------LKHRSEWARTKAKGE-EVLREVMPSACIVRPADMFG 199
Query: 181 SGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQA 239
D+ L + G H++ L + G +KQPV++GDVA AI C PDA AGK +
Sbjct: 200 EDDRLLTWIGSQ-LHIYPWL-ININGGSALKQPVWMGDVATAIRKYCMTPDAFAGKTMEL 257
Query: 240 VGPKRYLLSELLDWFH 255
GP+ ++L+ WF
Sbjct: 258 AGPEVISWADLVAWFQ 273
>gi|240280566|gb|EER44070.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Ajellomyces
capsulatus H143]
Length = 378
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 143/245 (58%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ N+L QG +I+PYR R L++ GDLG+
Sbjct: 49 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLASQGCTVIVPYREEMAK-RHLKVTGDLGR 107
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR++ TKNF+ D +V+ AR+A + + V+
Sbjct: 108 VVFMEYDLRNTQSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKYDVD 167
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NAD N P S+F+RTK QGEK FPE TI RP+ M+G D L
Sbjct: 168 RFIHVSSYNADMNSP-------SEFFRTKAQGEKLARMLFPETTIVRPAPMFGFEDNLLH 220
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++F + ++ PV+ DV A+ + G+ Y+ GPK Y
Sbjct: 221 KLAGIT-NLFTSNHMRER-----YWPVHAIDVGHALEKMLFTDSSVGQTYELYGPKNYST 274
Query: 248 SELLD 252
+E+ +
Sbjct: 275 AEIAE 279
>gi|325089168|gb|EGC42478.1| NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus H88]
Length = 782
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 143/245 (58%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ N+L QG +I+PYR R L++ GDLG+
Sbjct: 49 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLASQGCTVIVPYREEMAK-RHLKVTGDLGR 107
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR++ TKNF+ D +V+ AR+A + + V+
Sbjct: 108 VVFMEYDLRNTQSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKYDVD 167
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NAD N P S+F+RTK QGEK FPE TI RP+ M+G D L
Sbjct: 168 RFIHVSSYNADMNSP-------SEFFRTKAQGEKLARMLFPETTIVRPAPMFGFEDNLLH 220
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++F + ++ PV+ DV A+ + G+ Y+ GPK Y
Sbjct: 221 KLAGI-TNLFTSNHMRER-----YWPVHAIDVGHALEKMLFTDSSVGQTYELYGPKNYST 274
Query: 248 SELLD 252
+E+ +
Sbjct: 275 AEIAE 279
>gi|336272906|ref|XP_003351208.1| hypothetical protein SMAC_03511 [Sordaria macrospora k-hell]
gi|380092728|emb|CCC09481.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 375
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 140/243 (57%), Gaps = 14/243 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG +IIP+R Y+ R L++ GDLG+
Sbjct: 41 RNQGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVIIPFRDE-YNKRHLKVTGDLGK 99
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+ + RN I +++++S+VV NLIGR++ TKNF+ D ++E R+A + V+
Sbjct: 100 VVMIEFDLRNTQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAEAVAKYDVD 159
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NADP S+F+ TK +GE V FPEATI RP+ M+G D+ L
Sbjct: 160 RFIHVSSYNADPK-------SASEFFATKARGEHVVRSIFPEATIVRPAPMFGFEDRLLH 212
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ K + + PV+V DV A+ D + A + ++ GPK Y
Sbjct: 213 KLASV------KNILTSNWMQEKYNPVHVIDVGQALEQMLFDDNTASETFELYGPKTYST 266
Query: 248 SEL 250
+E+
Sbjct: 267 AEI 269
>gi|119194685|ref|XP_001247946.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor [Coccidioides immitis RS]
gi|392862814|gb|EAS36516.2| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
[Coccidioides immitis RS]
Length = 386
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 142/243 (58%), Gaps = 14/243 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ N+L +QG +I+PYR R L++ GDLG+
Sbjct: 49 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLARQGCTVIVPYREEMAK-RHLKVTGDLGR 107
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR++ TKNFT+ D ++E R+A + V+
Sbjct: 108 VVFMEYDLRNTQSIEESVRHSDVVYNLVGRDYPTKNFTLEDVHIEGTERIAESVAKYDVD 167
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
++IH+S+ NAD N P S+F+RTK QGE FPE TI RP+ M+G D+ L
Sbjct: 168 RYIHVSSYNADLNSP-------SEFFRTKAQGENAAREIFPETTIVRPAPMFGFEDRLLH 220
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++F + ++ PV+ DVA A+ + A + ++ GP Y
Sbjct: 221 KLAGI-TNIFTSNHMQER-----YWPVHAIDVAHALERMLLEEWTASQTFELYGPTNYST 274
Query: 248 SEL 250
+E+
Sbjct: 275 AEI 277
>gi|68468399|ref|XP_721759.1| potential mitochondrial Complex I, 40kd subunit [Candida albicans
SC5314]
gi|68468642|ref|XP_721640.1| potential mitochondrial Complex I, 40kd subunit [Candida albicans
SC5314]
gi|46443563|gb|EAL02844.1| potential mitochondrial Complex I, 40kd subunit [Candida albicans
SC5314]
gi|46443691|gb|EAL02971.1| potential mitochondrial Complex I, 40kd subunit [Candida albicans
SC5314]
Length = 386
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 141/256 (55%), Gaps = 20/256 (7%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V++ G GGRSS G ATVFGASG++G Y+ +KL + G+ I+P+R + R L++
Sbjct: 37 KVNVAVGAGGRSSRTGYTATVFGASGFLGRYVTSKLARHGTTTIVPFRDDMKK-RFLKVT 95
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F RN I ++ +S++VIN IG ++ TKNF +AD N+ + R+A +K
Sbjct: 96 GDLGVVNFVEIDARNLQSIEDSVAHSDIVINCIGVDYDTKNFKMADVNIALAERIAEATK 155
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+ V ++IH+S+ NADPN S FY TK E+ V P+ TI RP+ MYG
Sbjct: 156 KANVPRYIHVSSYNADPN-------SESVFYATKGIAEQVVRDIIPDTTIVRPAPMYGRE 208
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D L Y G MW K +E PVYV DVA A+ D AG+ ++
Sbjct: 209 DSLLNYLGPKVKMW-------TPNKNAKEV--WPVYVLDVARALERIAYDDSTAGQTFEL 259
Query: 240 VGPKRYLLSELLDWFH 255
GP++ E+ + H
Sbjct: 260 YGPEKVTFQEIRNMIH 275
>gi|238880591|gb|EEQ44229.1| hypothetical protein CAWG_02493 [Candida albicans WO-1]
Length = 386
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 141/256 (55%), Gaps = 20/256 (7%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V++ G GGRSS G ATVFGASG++G Y+ +KL + G+ I+P+R + R L++
Sbjct: 37 KVNVAVGAGGRSSRTGYTATVFGASGFLGRYVTSKLARHGTTTIVPFRDDMKK-RFLKVT 95
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F RN I ++ +S++VIN IG ++ TKNF +AD N+ + R+A +K
Sbjct: 96 GDLGVVNFVEIDARNLQSIEDSVAHSDIVINCIGVDYDTKNFKMADVNIALAERIAEATK 155
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+ V ++IH+S+ NADPN S FY TK E+ V P+ TI RP+ MYG
Sbjct: 156 KANVPRYIHVSSYNADPN-------SESVFYATKGIAEQVVRDIIPDTTIVRPAPMYGRE 208
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D L Y G MW K +E PVYV DVA A+ D AG+ ++
Sbjct: 209 DSLLNYLGPKVKMW-------TPNKNAKEV--WPVYVLDVARALERIAYDDSTAGQTFEL 259
Query: 240 VGPKRYLLSELLDWFH 255
GP++ E+ + H
Sbjct: 260 YGPEKVTFQEIRNMIH 275
>gi|241952751|ref|XP_002419097.1| NADH-ubiquinone oxidoreductase subunit, putative [Candida
dubliniensis CD36]
gi|223642437|emb|CAX42682.1| NADH-ubiquinone oxidoreductase subunit, putative [Candida
dubliniensis CD36]
Length = 453
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 142/256 (55%), Gaps = 20/256 (7%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V+L G GGRSS G ATVFGASG++G Y+ +KL + G+ I+P+R + R L++
Sbjct: 104 KVNLGVGAGGRSSRTGYTATVFGASGFLGRYVTSKLARHGTTTIVPFRDDMKK-RFLKVT 162
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F RN I ++ +S++VIN IG ++ TKNF +AD N+ + R+A +K
Sbjct: 163 GDLGVVNFVEIDARNLQSIEDSVAHSDIVINCIGVDYDTKNFKMADINIALAERIAEATK 222
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+ V ++IH+S+ NADP S FY TK GE+ V P++TI RP+ M+G
Sbjct: 223 KANVPRYIHVSSYNADP-------KSESVFYATKGIGEQVVRDIIPDSTIVRPAPMFGRE 275
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D L Y G MW K +E PVYV DVA A+ D AG+ ++
Sbjct: 276 DSLLNYLGPKVKMW-------TPNKNAKEV--WPVYVLDVAKALEKIAYDDSTAGQTFEL 326
Query: 240 VGPKRYLLSELLDWFH 255
GP++ E+ + H
Sbjct: 327 YGPEKVTFQEIRNMIH 342
>gi|119472804|ref|XP_001258421.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Neosartorya fischeri NRRL 181]
gi|119406573|gb|EAW16524.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Neosartorya fischeri NRRL 181]
Length = 382
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 139/245 (56%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ NKL QG +++P+R R L+ GDLG+
Sbjct: 45 KVQGGRSSLGGHTATVFGATGFLGRYIVNKLANQGCTVVVPFREEMTK-RHLKPTGDLGR 103
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR++ TKNF+ D +V+ R+A + V+
Sbjct: 104 VVFIEYDLRNTQSIEESVRHSDVVYNLVGRQYPTKNFSYTDVHVDGTERIAEAVAKYDVD 163
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NAD N P S+F+RTK GE+ FPE TI RP+ M+G D L
Sbjct: 164 RFIHVSSYNADKNSP-------SEFFRTKAWGEEVARSIFPETTIVRPAPMFGFEDNLLH 216
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ L +E PV+V DV +A+ D AG+ ++ GPK Y
Sbjct: 217 KLAGV-----TNLFTSNHMQERF-WPVHVIDVGSALELMLHDDTTAGQTFELYGPKNYST 270
Query: 248 SELLD 252
+E+ +
Sbjct: 271 AEIAE 275
>gi|70992617|ref|XP_751157.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Aspergillus
fumigatus Af293]
gi|66848790|gb|EAL89119.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Aspergillus fumigatus Af293]
gi|159124728|gb|EDP49846.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Aspergillus fumigatus A1163]
Length = 382
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 138/243 (56%), Gaps = 14/243 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ NKL QG +++P+R R L+ GDLG+
Sbjct: 45 KVQGGRSSLGGHTATVFGATGFLGRYIVNKLANQGCTVVVPFREEMTK-RHLKPTGDLGR 103
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR++ TKNF+ D +V+ R+A + V+
Sbjct: 104 VVFIEYDLRNTQSIEESVRHSDVVYNLVGRQYPTKNFSYTDVHVDGTERIAEAVAKYDVD 163
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NAD N P S+F+RTK GE+ FPE TI RP+ M+G D L
Sbjct: 164 RFIHVSSYNADKNSP-------SEFFRTKAWGEEVARSIFPETTIVRPAPMFGFEDNLLH 216
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ L +E PV+V DV +A+ D AG+ ++ GPK Y
Sbjct: 217 KLAGV-----TNLFTSNHMQERF-WPVHVIDVGSALELMLHDDTTAGQTFELYGPKNYST 270
Query: 248 SEL 250
+E+
Sbjct: 271 AEI 273
>gi|449303966|gb|EMC99973.1| hypothetical protein BAUCODRAFT_30399 [Baudoinia compniacensis UAMH
10762]
Length = 392
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 141/241 (58%), Gaps = 14/241 (5%)
Query: 10 TGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVL 69
+GGRSS G TVFGA+G++G Y+ N++ + G +++P+R R L++ GDLG+V+
Sbjct: 57 SGGRSSLGGHTVTVFGATGFLGRYIVNRMARAGCTVVVPFREEMKK-RHLKVSGDLGRVV 115
Query: 70 FQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129
F Y RN I +++++S++V NL+GR++ TKNF + D +VE R+A + V++F
Sbjct: 116 FLEYDLRNTASIEESVRHSDIVYNLVGRDYPTKNFDLEDVHVEGTRRIADAVAKYDVDRF 175
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
I +S+ +A P+ P S+FYRTKY E+ FPE TI RP+ M+G D+ L
Sbjct: 176 IQVSSHSAHPDSP-------SEFYRTKYWSERVARDIFPETTIVRPAPMFGFEDRLLHRL 228
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
+ R + EE + PV+V DV AA+ + D AG+ ++ GPK Y + E
Sbjct: 229 ANA-----RNILSCNNMEERL-WPVHVIDVGAALESIGMDDSTAGQTFELYGPKEYTMME 282
Query: 250 L 250
L
Sbjct: 283 L 283
>gi|448078969|ref|XP_004194282.1| Piso0_004769 [Millerozyma farinosa CBS 7064]
gi|359375704|emb|CCE86286.1| Piso0_004769 [Millerozyma farinosa CBS 7064]
Length = 380
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 145/261 (55%), Gaps = 20/261 (7%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V++ G GGRSS G ATVFGASG++G YL +KL K G+ I+PYR + R L++
Sbjct: 35 KVNIVSGHGGRSSRTGYTATVFGASGFLGRYLSSKLAKHGTITIVPYRDDMKK-RFLKVA 93
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F + RN I+ ++ +S++V N +G ++ TKNF++AD N+ I R+A++ K
Sbjct: 94 GDLGVVNFVEFDSRNLKSIQDSVAHSDIVFNCVGVDYNTKNFSMADVNIGITERIAQVVK 153
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
E G +F+H+S+ NA+P + Y Y TK GE V P+ATI RP+ MYG
Sbjct: 154 ETGNPRFVHVSSYNANPESESVY-------YATKGIGENIVRDLVPDATIVRPAPMYGRE 206
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D L Y G MW K G+E PV+V DVA A+ D G+ Y+
Sbjct: 207 DNLLNYLGPKIKMW-------TPNKNGKEIY--PVHVLDVAKALEKIGYDDSTVGQTYEL 257
Query: 240 VGPKRYLLSELLDWFHVVMKK 260
GP++ E+ H + +
Sbjct: 258 YGPEKLSYLEIRQMIHGITQN 278
>gi|260948472|ref|XP_002618533.1| hypothetical protein CLUG_01993 [Clavispora lusitaniae ATCC 42720]
gi|238848405|gb|EEQ37869.1| hypothetical protein CLUG_01993 [Clavispora lusitaniae ATCC 42720]
Length = 380
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 153/283 (54%), Gaps = 22/283 (7%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V++ G GGRSS G ATVFGASG++G YL +KL K G+ +++P+R + R L++
Sbjct: 32 KVNVSVGPGGRSSRTGYTATVFGASGFLGRYLNSKLAKHGTNVVVPFRDDMKK-RFLKVS 90
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F + RN D I +A+ +S++V N IG ++ TKNF+IAD NV I R+ + K
Sbjct: 91 GDLGVVNFVEFDARNLDSIAEAVAHSDIVFNCIGADYWTKNFSIADVNVGITERITKAVK 150
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
E G +++++S+ NADP S S +Y TK E+ V P++TI RPS M+G
Sbjct: 151 EAGNPRYVYVSSYNADP-------SSSSIYYATKGIAEQVVRDILPDSTIVRPSPMFGRE 203
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D L Y G MW +Y PV+V DVA A+ D G+ Y+
Sbjct: 204 DNLLNYLGPKLKMWTPNKNAKEIY---------PVHVLDVARALEKIGYDDSTVGQTYEL 254
Query: 240 VGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKL 282
GP++ E+ H + + G + Y+ D +PL L
Sbjct: 255 YGPEKLSFLEIRQMIHGITQDTS-QVGPFSYNFA-DYEVPLSL 295
>gi|66823679|ref|XP_645194.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Dictyostelium discoideum AX4]
gi|74857844|sp|Q559Z0.1|NDUA9_DICDI RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; Flags: Precursor
gi|60473339|gb|EAL71285.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Dictyostelium discoideum AX4]
Length = 356
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 145/253 (57%), Gaps = 18/253 (7%)
Query: 1 MCRVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR 60
+ R+H G R+ G+VATVFGA+G+ G YL L + G Q+++PYR RDL+
Sbjct: 26 LTRIH----HGSRTQTTGLVATVFGATGFTGRYLVQLLARTGIQVVVPYRCEDEGFRDLK 81
Query: 61 LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARL 120
+ G+LGQ++ + R+ + I +AI +SN+VIN+ GR++ T+NF++ D NV +R+A L
Sbjct: 82 VLGELGQIIPVRFDIRDSESIERAISHSNIVINMAGRDYETRNFSLDDINVHAASRIADL 141
Query: 121 SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYG 180
SK VEK+IH+S L A + P S F R+K GEK P T+ RPS ++G
Sbjct: 142 SK--NVEKYIHVSTLRASEDSP-------SHFSRSKAIGEKLTREIIPNCTVVRPSIIFG 192
Query: 181 SGDKFLRYYGHMWRHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQA 239
DKF+ + W V + + + K QP++ D+A+ I++ + P +GK+Y+
Sbjct: 193 DEDKFI----NKWSKVSQNWPFIPRYNQQHKIQPLHCYDLASGILSILETPGTSGKVYEF 248
Query: 240 VGPKRYLLSELLD 252
G + + E LD
Sbjct: 249 AGDEVFTWDEFLD 261
>gi|452823042|gb|EME30056.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Galdieria
sulphuraria]
Length = 385
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 145/237 (61%), Gaps = 10/237 (4%)
Query: 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V+ATVFG++G++G Y+ N+LG+ GSQ+I +RG+ D R L+ GDLGQ++ R+
Sbjct: 63 VIATVFGSTGFLGRYVVNQLGRVGSQVIATWRGDELDARHLKPMGDLGQIIPFEIELRHH 122
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ +RK+++ SNVVINL+G+ + T+ +++ D +V +A+++KE+GVE FIH+S++ AD
Sbjct: 123 ESLRKSMENSNVVINLLGKNYPTRYYSLYDVHVTASRTIAQIAKEVGVEHFIHVSSIGAD 182
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
N S+F RTK GE+ V FP ATI RP D++G D F+ + + F
Sbjct: 183 KN-------SKSEFLRTKALGEEAVRDIFPSATIIRPCDIFGDEDNFINRACIIVK-TFP 234
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWF 254
+ + +G + QPV+ D+A I A +DP+ GK ++ G K Y + E +W
Sbjct: 235 FIPLVNEGRCKV-QPVWCNDIAMVIRRASQDPEMFLGKTFELGGTKVYTIREFYEWI 290
>gi|393230765|gb|EJD38366.1| NAD(P)-binding protein [Auricularia delicata TFB-10046 SS5]
Length = 390
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 146/253 (57%), Gaps = 19/253 (7%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
G GRS+ G +ATVFG +G++G YL KL K G+Q+++PYR R LR+ GDLGQ
Sbjct: 33 SGPPGRSAVTGQIATVFGCTGFLGRYLVAKLAKAGTQVVVPYRDEDKK-RHLRVMGDLGQ 91
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+ + RN+ +I + +++S++V NL+GR++ TKNF NV R+A +S +GV
Sbjct: 92 VVPLEFDARNEAQIEECVRHSHIVYNLVGRDYETKNFDYNAVNVAAAQRIAEVSARVGVP 151
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+F+H+S LNA+ + P S+FYRTK GE+ V FP+ATI RP+ M+G DK L
Sbjct: 152 RFVHVSHLNANFDSP-------SEFYRTKALGEEAVRDVFPDATIIRPAAMFGWEDKLLN 204
Query: 188 --YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
Y +W + G ET +PV+V DVA A+ + P A + GPK +
Sbjct: 205 KLYRWPIWFKL--------NGGETRVRPVHVMDVAQALKNLIERP-ALAETLSLPGPKTH 255
Query: 246 LLSELLDWFHVVM 258
+ LL+ V+
Sbjct: 256 TYNYLLELVASVL 268
>gi|116179562|ref|XP_001219630.1| hypothetical protein CHGG_00409 [Chaetomium globosum CBS 148.51]
gi|88184706|gb|EAQ92174.1| hypothetical protein CHGG_00409 [Chaetomium globosum CBS 148.51]
Length = 377
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 140/245 (57%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ TGGRSS G ATVFGA+G +G Y+ N+L +QG +I+PYR R L++ GDLG+
Sbjct: 40 RTTGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVIVPYREEMAK-RHLKVTGDLGR 98
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y N I +++++S+VV NL+GR + TKNF++ D ++E R+A + V+
Sbjct: 99 VVFIEYDLHNTQSIEESVRHSDVVYNLVGRNYPTKNFSLGDVHIEGTERIAEAVAKYNVD 158
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NA+P S+FY TK GEK FPE TI RP+ M+G DK L
Sbjct: 159 RFIHVSSYNANPQ-------SASEFYATKGYGEKVARDIFPETTIVRPAPMFGFEDKLLL 211
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ L +ET PV+V DV A+ D + A + ++ GP++Y
Sbjct: 212 KLASV-----ANLFTANNMQETY-WPVHVIDVGEALEKMMFDDNTASQTFELYGPRQYST 265
Query: 248 SELLD 252
+E+ +
Sbjct: 266 AEIAE 270
>gi|448083542|ref|XP_004195382.1| Piso0_004769 [Millerozyma farinosa CBS 7064]
gi|359376804|emb|CCE85187.1| Piso0_004769 [Millerozyma farinosa CBS 7064]
Length = 380
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 144/260 (55%), Gaps = 20/260 (7%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V++ G GGRSS G ATVFGASG++G YL +KL K G+ I+PYR + R L++
Sbjct: 35 KVNIVSGHGGRSSRTGYTATVFGASGFLGRYLSSKLAKHGTITIVPYRDDMKK-RFLKVA 93
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F + RN I+ ++ +S++V N IG ++ TKNF++AD N+ I R+A++ K
Sbjct: 94 GDLGVVNFVEFDSRNLKSIQDSVAHSDIVFNCIGVDYNTKNFSMADVNIGITERIAQVVK 153
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
E G +F+H+S+ NA+P + Y Y TK GE V P+ATI RP+ MYG
Sbjct: 154 ETGNPRFVHVSSYNANPESESVY-------YATKGIGENIVRDLVPDATIVRPAPMYGRE 206
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D L Y MW K G+E PV+V DVA A+ D G+ Y+
Sbjct: 207 DNLLNYLAPKIKMW-------TPNKNGKEIY--PVHVLDVAKALEKIGYDDSTVGQTYEL 257
Query: 240 VGPKRYLLSELLDWFHVVMK 259
GP++ E+ H + +
Sbjct: 258 YGPEKLTYLEIRQMIHGITQ 277
>gi|255725854|ref|XP_002547853.1| hypothetical protein CTRG_02150 [Candida tropicalis MYA-3404]
gi|240133777|gb|EER33332.1| hypothetical protein CTRG_02150 [Candida tropicalis MYA-3404]
Length = 390
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 144/261 (55%), Gaps = 20/261 (7%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V+L G GGRSS G ATVFGASG++G YL +KL + G+ I+P+R + R L++
Sbjct: 41 KVNLAVGAGGRSSRTGYTATVFGASGFLGRYLTSKLARHGTTTIVPFRDDMKK-RFLKVT 99
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F RN I ++ S++VIN IG ++ TKNF++AD N+ + R+A +K
Sbjct: 100 GDLGVVNFVEIDARNLQSIEDSVANSDIVINCIGADYNTKNFSMADVNIALAERIALATK 159
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+ V ++IH+S+ NADP S FY TK GE+ V PE T+ RP+ MYG
Sbjct: 160 KANVPRYIHVSSYNADP-------KSESVFYATKGIGEQVVRDIIPETTLVRPAPMYGRE 212
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D+ L Y G MW K +E PVYV DVA + D AG+ ++
Sbjct: 213 DQLLNYLGPKIKMW-------TPNKNAKEI--WPVYVLDVARGLEKIAFDDSTAGQTFEL 263
Query: 240 VGPKRYLLSELLDWFHVVMKK 260
GP++ E+ + + + +K
Sbjct: 264 YGPEKVSFHEIRNMINGITEK 284
>gi|328858126|gb|EGG07240.1| hypothetical protein MELLADRAFT_77647 [Melampsora larici-populina
98AG31]
Length = 391
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 145/266 (54%), Gaps = 15/266 (5%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
R+ G GR + G TVFGA+G++G YL +KL K+G+Q+I+PYR R LR+
Sbjct: 49 RLVQSAGPPGRHANAGQTVTVFGATGFLGRYLVHKLAKRGTQVIVPYRDE-DSKRHLRVM 107
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLGQ++ + N I +++SNVV NLIGRE TKN+ D V+ LA +K
Sbjct: 108 GDLGQIVPLEFDLSNQTLIDDCLRHSNVVYNLIGREHETKNYKFDDVFVKGAGILAERAK 167
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+GV++FIH+S LNA + S+FYRTK GE+ V FP ATI +PS M+G
Sbjct: 168 SLGVDRFIHLSHLNASHD-------SISKFYRTKALGEQLVKATFPGATIVKPSTMFGPE 220
Query: 183 DKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
D+FL + V + G ET +PV+V DVA A+ + P G+ ++ GP
Sbjct: 221 DRFLN------KMVTKPFTFKVNGLETRVRPVHVIDVAEALEMMSRAPSTIGQTFELTGP 274
Query: 243 KRYLLSELLDWFH-VVMKKGEPDYGY 267
+ Y EL + +K P G+
Sbjct: 275 RTYTYEELFGVLEALTLKPLTPSIGF 300
>gi|389637518|ref|XP_003716394.1| hypothetical protein MGG_03525 [Magnaporthe oryzae 70-15]
gi|351642213|gb|EHA50075.1| hypothetical protein MGG_03525 [Magnaporthe oryzae 70-15]
gi|440466878|gb|ELQ36121.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Magnaporthe oryzae
Y34]
gi|440479875|gb|ELQ60612.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Magnaporthe oryzae
P131]
Length = 375
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 144/245 (58%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG +++PYR R L+L GDLG+
Sbjct: 38 RTQGGRSSIGGHTATVFGATGQVGRYIVNRLARQGCTVVVPYREEMAK-RHLKLTGDLGR 96
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR + TKNF++ D +VE R+A + V+
Sbjct: 97 VVFIEYDLRNTASIEESVRHSDVVYNLVGRNYPTKNFSLEDVHVEGAERIAEAVAKYDVD 156
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NA+ + P S+F+RTK +GE+ V FPE TI RP+ ++G D L
Sbjct: 157 RFIHVSSHNANLDSP-------SEFFRTKARGEQVVRSIFPETTIVRPAPVFGFEDNLLL 209
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++F + +K PV+ DV A+ D AG+ ++ GPK Y +
Sbjct: 210 KLASVV-NLFTANHMQQKF-----NPVHSIDVGEALEKMLYDDSTAGQTFELYGPKNYSM 263
Query: 248 SELLD 252
SE+ +
Sbjct: 264 SEIAE 268
>gi|330797894|ref|XP_003286992.1| hypothetical protein DICPUDRAFT_97564 [Dictyostelium purpureum]
gi|325083015|gb|EGC36479.1| hypothetical protein DICPUDRAFT_97564 [Dictyostelium purpureum]
Length = 352
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 140/235 (59%), Gaps = 14/235 (5%)
Query: 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
+VATVFGA+G+ G Y+ L + G Q+++PYRG + RDL++ GD+GQ++ Y RN+
Sbjct: 35 LVATVFGATGFTGRYIVQALARTGVQVVVPYRGEDWTFRDLKVLGDIGQIIPVRYDIRNE 94
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ I +AI +SN+VINL GR + T+NF++ D NV+ R+AR+S+ V+++I++SALNA
Sbjct: 95 ESIERAISHSNIVINLAGRNYDTRNFSLQDINVDAAERIARISQ--NVDRYIYVSALNAS 152
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
+ S+F RTK GEK + P+ATI RPS ++G D+F+ + W V +
Sbjct: 153 ED-------ASSEFARTKALGEKVSRKHNPKATIVRPSIIFGDEDRFI----NKWSKVSQ 201
Query: 199 KLAVYKK-GEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ E QP++ D A I++ ++P A K + G + + + LD
Sbjct: 202 NWPFIPRFNSEHKIQPLHCSDFAKGILSTIENPQAVAKTCEFAGDETFTWDQFLD 256
>gi|358394267|gb|EHK43660.1| hypothetical protein TRIATDRAFT_300143 [Trichoderma atroviride IMI
206040]
Length = 376
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 142/243 (58%), Gaps = 14/243 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG +++P+R R L+L GDLG+
Sbjct: 39 RSEGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVVPFREEMTK-RHLKLTGDLGR 97
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F + RN I ++++S+VV NLIGR++ TKNFT+ D +VE R+A + V+
Sbjct: 98 VIFVEHDLRNTASIEASVRHSDVVYNLIGRDYPTKNFTLEDVHVEGTERIAEAVAKYDVD 157
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
++IH+S+ NAD N P S+F+ TK +GE FPE TI RP+ ++G D L
Sbjct: 158 RYIHVSSHNADVNSP-------SEFFATKGRGELVARSIFPETTIVRPAPVFGFEDNLLL 210
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++F + +K PV+ DV AA+ D AGK ++ GPK+Y L
Sbjct: 211 KLASVL-NLFTANNMQEKF-----WPVHSIDVGAALEKMLYDDSTAGKTFELYGPKQYSL 264
Query: 248 SEL 250
+E+
Sbjct: 265 AEI 267
>gi|425772177|gb|EKV10590.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Penicillium digitatum PHI26]
gi|425775826|gb|EKV14075.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Penicillium digitatum Pd1]
Length = 382
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 144/247 (58%), Gaps = 14/247 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L K GGRSS G ATVFGA+G++G Y+ NKL +QG ++IP+R R L++ GDL
Sbjct: 42 LLKVQGGRSSIGGHTATVFGATGFLGRYIVNKLARQGCTVVIPFREEMTK-RHLKVTGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
G+V+F Y RN I +++++S+VV NL+GR++ TKNF+ D +V+ R+A +
Sbjct: 101 GRVVFMEYDLRNTQSIEESVRHSDVVYNLVGRQYPTKNFSYEDVHVDGTERIAEAVAKYD 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++FIH+S+ NA + P S+++ TK GE+ V + +PE TI RP+ M+G D
Sbjct: 161 VDRFIHVSSYNARRDSP-------SEYFATKAWGEEIVRKIYPETTIVRPAPMFGFEDNL 213
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L + +VF + ++ PV+ DVA A+ D AG+ Y+ GPK Y
Sbjct: 214 LHKLAKIG-NVFTSNHMQER-----YWPVHAIDVATALERMLHDDSTAGQTYELYGPKNY 267
Query: 246 LLSELLD 252
+E+ +
Sbjct: 268 STAEIAE 274
>gi|156042508|ref|XP_001587811.1| hypothetical protein SS1G_11051 [Sclerotinia sclerotiorum 1980]
gi|154695438|gb|EDN95176.1| hypothetical protein SS1G_11051 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 345
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 135/233 (57%), Gaps = 14/233 (6%)
Query: 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN 77
G ATVFGA+G++G Y+ N+L KQG +I+P+R R L++ GDLG+V+F Y RN
Sbjct: 18 GHTATVFGATGFLGRYIVNRLAKQGCTVIVPFREEMAK-RHLKVSGDLGRVIFMEYDLRN 76
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ +++++S+VV NL+GR + TKNF + D +VE R+A + V++FIH+S+ NA
Sbjct: 77 TQSLEESVRHSDVVYNLVGRNYPTKNFDLEDVHVEGAERIADAVAKYDVDRFIHVSSYNA 136
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DPN P S+FYRTK +GE V FPE TI RP+ ++G D+ L F
Sbjct: 137 DPNSP-------SEFYRTKARGEAVVRSIFPETTIVRPAPLFGFEDRLLHKLAG-----F 184
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ +E PV+ DV A+ +D + A + Y+ GPK Y +E+
Sbjct: 185 TNVLTSNHMQERY-WPVHAPDVGQALEKMLQDDNTASQTYELYGPKNYSTAEI 236
>gi|320587229|gb|EFW99709.1| NADH-ubiquinone oxidoreductase [Grosmannia clavigera kw1407]
Length = 383
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 138/249 (55%), Gaps = 20/249 (8%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGASG +G Y+ N+L +QG +++P+R R L++ GDLG+
Sbjct: 44 RTQGGRSSLGGHTATVFGASGALGRYIVNRLARQGCTVVVPFREEMTK-RHLKVSGDLGR 102
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR + TKNFT+ D +VE R+A + V+
Sbjct: 103 VIFMEYDLRNTASIEESVRHSDVVYNLVGRNYPTKNFTLEDVHVEGAERIAEAVAKYDVD 162
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NA + S+F+RTK GE V FPE TI RP+ M+G D L
Sbjct: 163 RFIHVSSYNAAGAE-----TSPSEFFRTKALGEAAVRDIFPETTIVRPAPMFGFEDSLL- 216
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQ----PVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
R VY Q PV++ DV A+ D + AG+ Y+ GPK
Sbjct: 217 ---------LRLAGVYNLLTSNNMQERYWPVHIIDVGRALELMLFDDNTAGQTYELFGPK 267
Query: 244 RYLLSELLD 252
Y +E+ +
Sbjct: 268 NYSTAEIAE 276
>gi|296419789|ref|XP_002839474.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635635|emb|CAZ83665.1| unnamed protein product [Tuber melanosporum]
Length = 367
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 138/241 (57%), Gaps = 16/241 (6%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G ATVFGA+G++G Y+ N+L + G ++IPYR R L++ GDLG+V+F
Sbjct: 34 GGRSSIGGHTATVFGATGFLGRYIVNRLARSGCTVVIPYREEMAK-RHLKVTGDLGRVVF 92
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
+ RN I ++++S++V NL+GR++ TKNFT D +VE R+A + V++FI
Sbjct: 93 MEWDMRNTPSIEASVRHSDIVFNLVGRDYTTKNFTYEDVHVEATQRIAEAIAKYDVDRFI 152
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL-RYY 189
+S+ NAD N P S++Y TK Q E++ FPE TI RP MYG D+ L R
Sbjct: 153 QVSSFNADKNSP-------SKYYATKGQAEEDARAIFPETTIVRPGPMYGFEDRLLHRLA 205
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
G ++F + +K +PV+V DV A+ D A + ++ GP+ L E
Sbjct: 206 GTT--NIFTANNMQQK-----MRPVHVIDVGKALEVIAYDDATASQTFELYGPRELTLKE 258
Query: 250 L 250
+
Sbjct: 259 I 259
>gi|310795030|gb|EFQ30491.1| NAD dependent epimerase/dehydratase [Glomerella graminicola M1.001]
Length = 375
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 141/246 (57%), Gaps = 14/246 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG ++IP+R R L++ GDLG+
Sbjct: 38 RTQGGRSSLGGHTATVFGATGQVGRYIVNRLARQGCTVVIPFREEMAK-RHLKVAGDLGR 96
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR + TKNF++ D +VE R+A + V+
Sbjct: 97 VVFMEYDLRNTQSIEESVRHSDVVYNLVGRNYPTKNFSLEDVHVEGTERIAEAVAKYDVD 156
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NA+ + P S+FYRTK +GE+ +PE TI RP+ ++G D L
Sbjct: 157 RFIHMSSYNANLDSP-------SEFYRTKARGEQVARSIYPETTIVRPAPIFGFEDNLLL 209
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ L +E + PV+ DV A+ D AG+ Y+ GPK Y +
Sbjct: 210 KLASVM-----NLFTANNMQERFR-PVHSIDVGQALELMLYDDSTAGQTYELYGPKEYSM 263
Query: 248 SELLDW 253
+E+ +
Sbjct: 264 AEIAQF 269
>gi|340518819|gb|EGR49059.1| predicted protein [Trichoderma reesei QM6a]
Length = 376
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 141/240 (58%), Gaps = 14/240 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G ATVFGA+G +G Y+ N+L +QG +++P+R R L+L GDLG+V+F
Sbjct: 42 GGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVVPFREEMTK-RHLKLTGDLGRVIF 100
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
Y RN I ++++S+VV NL+GR++ TKNFT+ D +VE R+A + V+++I
Sbjct: 101 IEYDLRNTASIEASVRHSDVVYNLVGRDYPTKNFTLEDVHVEGTERIAEAVAKYDVDRYI 160
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ NA+PN S+F+ TK +GE FPE TI RP+ ++G D L
Sbjct: 161 HVSSHNANPNST-------SEFFATKGRGELVARSIFPETTIVRPAPVFGFEDNLLLKLA 213
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ ++F + +K PV+ DV AA+ D AGK ++ GPK+Y L+E+
Sbjct: 214 SVL-NLFTANNMQQKF-----WPVHSIDVGAALEKMLYDDSTAGKTFELYGPKQYSLAEV 267
>gi|358385632|gb|EHK23228.1| hypothetical protein TRIVIDRAFT_86926 [Trichoderma virens Gv29-8]
Length = 376
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 142/240 (59%), Gaps = 14/240 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G ATVFGA+G +G Y+ N+L +QG +++P+R R L++ GDLG+V+F
Sbjct: 42 GGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVVPFREEMTK-RHLKVTGDLGRVIF 100
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
Y RN I ++++S+VV NL+GR++ TKNFT+ D +VE R+A + V+++I
Sbjct: 101 VEYDLRNTASIEASVRHSDVVYNLVGRDYPTKNFTLEDVHVEGTERIAEAVAKYDVDRYI 160
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ NA+ N P S+F+ TK +GE FPEATI RP+ ++G D L
Sbjct: 161 HVSSHNANVNSP-------SEFFATKGRGELVARNIFPEATIVRPAPIFGFEDNLLLKLA 213
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ ++F + +K PV+ DV AA+ D AGK ++ GPK+Y L+E+
Sbjct: 214 SVL-NLFTANNMQEKF-----WPVHSIDVGAALEKMLYDDSTAGKTFELYGPKQYSLAEV 267
>gi|321257130|ref|XP_003193480.1| NADH dehydrogenase (ubiquinone) [Cryptococcus gattii WM276]
gi|317459950|gb|ADV21693.1| NADH dehydrogenase (ubiquinone), putative [Cryptococcus gattii
WM276]
Length = 411
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 139/242 (57%), Gaps = 15/242 (6%)
Query: 10 TGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVL 69
TGGRSS +G A VFG++G++ YL KL +QG+Q+I+PYR + R LR CGDLGQ++
Sbjct: 52 TGGRSSDSGRTAAVFGSTGFLARYLIQKLARQGTQVIVPYRDE-DEKRRLRPCGDLGQIV 110
Query: 70 FQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129
+ R ++ + +K+++VV NL+GR++ T+N++ D NV++ +A +S +MG+ +
Sbjct: 111 PLEWDARIPEQTAECVKHADVVYNLVGRDYETRNYSYDDVNVKVAQSIAEISADMGIPRL 170
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
IH+S +NA+P S+FYRTKY GE+ V FPEATI RPS ++G D L
Sbjct: 171 IHVSHINANPE-------STSEFYRTKYAGERAVRDAFPEATIVRPSQLFGHEDWLLNAI 223
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-DAAGKIYQAVGPKRYLLS 248
F LA G T P +V DVA A+ P + + GP+ Y
Sbjct: 224 AR-----FPILAKLNNG-NTKFFPAHVVDVAQALNLMFDAPVTSTASTFVLPGPELYTYG 277
Query: 249 EL 250
EL
Sbjct: 278 EL 279
>gi|58257457|gb|AAW69350.1| NADH-ubiquinone oxidoreductase 40 kDa subunit-like protein
[Magnaporthe grisea]
Length = 375
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 143/245 (58%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG +++PYR R L+L GDLG+
Sbjct: 38 RTQGGRSSIGGHTATVFGATGQVGRYIVNRLARQGCTVVVPYREEMAK-RHLKLTGDLGR 96
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR + TKNF++ D +VE R+A + V+
Sbjct: 97 VVFIEYDLRNTASIEESVRHSDVVYNLVGRNYPTKNFSLEDVHVEGAERIAEAVAKYDVD 156
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NA+ + P S+F+RTK +GE+ V FPE TI RP+ ++G D L
Sbjct: 157 RFIHVSSHNANLDSP-------SEFFRTKARGEQVVRSIFPETTIVRPAPVFGFEDNLLL 209
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++F + +K PV+ DV A+ D AG+ + GPK Y +
Sbjct: 210 KLASVV-NLFTANHMQQKF-----NPVHSIDVGEALEKMLYDDSTAGQTLELYGPKNYSM 263
Query: 248 SELLD 252
SE+ +
Sbjct: 264 SEIAE 268
>gi|212534330|ref|XP_002147321.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Talaromyces marneffei ATCC 18224]
gi|210069720|gb|EEA23810.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Talaromyces marneffei ATCC 18224]
Length = 385
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 140/242 (57%), Gaps = 14/242 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G ATVFGA+G++G Y+ N+L + G +I+P+R R L++ GDLG+V+F
Sbjct: 51 GGRSSLGGHTATVFGATGFLGRYIVNRLARSGCTVIVPFREEMTK-RHLKVTGDLGRVVF 109
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
Y RN + I +++++S+VV NL+GR++ TKNFT D +V+ R+A + +++FI
Sbjct: 110 MEYDLRNTESIEESVRHSDVVYNLVGRDYPTKNFTYEDVHVDGAERIAEAVAKYDIDRFI 169
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ NA + P S+F++TK GE+ V FPE TI RP+ M+G D L
Sbjct: 170 HVSSYNAAEDSP-------SEFFKTKGWGERVVRNIFPETTIVRPAPMFGFEDNLL---- 218
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
H V L E PV+ DV AA+ D + A + ++ GPK+Y +EL
Sbjct: 219 HKLAGVTNLLTSNHMQERF--WPVHAIDVGAALERMLYDDNTASQTFELYGPKQYSTAEL 276
Query: 251 LD 252
+
Sbjct: 277 AE 278
>gi|403419232|emb|CCM05932.1| predicted protein [Fibroporia radiculosa]
Length = 368
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 140/246 (56%), Gaps = 15/246 (6%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GRS+ G VATVFG +G++G YL KL K G+Q+IIPYR + R LR+ GDL
Sbjct: 38 IAHGPPGRSASTGHVATVFGCTGFLGRYLVAKLAKAGTQVIIPYREE-DEKRHLRVTGDL 96
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++ + RNDD+I + +++S++V NL+GRE+ TKNF + R+A ++ + G
Sbjct: 97 GQIVSMEWDLRNDDQIAECVRHSDIVYNLVGREYETKNFNFDAVHATGAQRIANIAAQSG 156
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V +F+H+S LNA N P S+FYR+K +G+ V FP ATI RP+ MYG D+
Sbjct: 157 VARFVHVSHLNASHNSP-------SEFYRSKARGDDLVQEAFPSATIVRPAIMYGYEDRL 209
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L +W ++ KL +T +PV+V DVA A+ P G + GP
Sbjct: 210 LNNMA-IWP-IWWKL----NHMQTKIRPVHVMDVAQALTNLISVPSQPGT-FNLPGPSTL 262
Query: 246 LLSELL 251
LL
Sbjct: 263 SFEYLL 268
>gi|407918818|gb|EKG12081.1| NmrA-like protein [Macrophomina phaseolina MS6]
Length = 386
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 141/247 (57%), Gaps = 24/247 (9%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G ATVFGA+G++G Y+ N+L +QG +++P+R R L++ GDLG+V+F
Sbjct: 52 GGRSSLGGHTATVFGATGFLGRYIVNRLARQGVTVVVPFREEMAK-RHLKVAGDLGRVVF 110
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
Y RN I +++++S++V NL+GR++ TKNF + D +VE R+A + V++F+
Sbjct: 111 IEYDLRNTQSIEESVRHSDIVYNLVGRDYPTKNFDLEDVHVEGAERIAEAVAKYDVDRFV 170
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ NA+ N P S+F+RTK +GE+ V +PE TI RP+ M+G+ D+ L
Sbjct: 171 HVSSYNANKNSP-------SEFFRTKARGEEVVRSIYPETTIVRPAPMFGAEDRLL---- 219
Query: 191 HMWRHVFRKLA-----VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
+LA + E PV+ DV A+ + A + Y+ GP Y
Sbjct: 220 -------NRLAGPTNFITSNNMEERYWPVHAIDVGMALEYMLHNDSTASETYELYGPTNY 272
Query: 246 LLSELLD 252
+EL +
Sbjct: 273 STAELAE 279
>gi|146422498|ref|XP_001487186.1| hypothetical protein PGUG_00563 [Meyerozyma guilliermondii ATCC
6260]
gi|146388307|gb|EDK36465.1| hypothetical protein PGUG_00563 [Meyerozyma guilliermondii ATCC
6260]
Length = 382
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 141/260 (54%), Gaps = 20/260 (7%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V++ G GGRSS G ATVFGASG++G YL +K+ K G+ I+P+R R L++
Sbjct: 35 KVNVVSGRGGRSSRTGYTATVFGASGFLGRYLTSKIAKHGTYTIVPFRDEMKS-RFLKVS 93
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F + RN I ++ +S++V N IG ++ TKNF++AD N+ + R+ + K
Sbjct: 94 GDLGVVNFVEFDARNLKSIEDSVAHSDIVYNCIGADYNTKNFSMADVNIGLTERITQAVK 153
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+ GV +F+H+S+ NA+P S FY TK GE+ V P++TI RP+ MYG
Sbjct: 154 DAGVPRFVHVSSYNANPQ-------SDSVFYATKGIGEQVVREILPQSTIVRPAPMYGRE 206
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D L Y G MW +Y PV+V DVA A+ D G+ Y+
Sbjct: 207 DTLLNYLGPKLKMWTPNKNAKEIY---------PVHVLDVAEALEKIGFDDSTIGQTYEL 257
Query: 240 VGPKRYLLSELLDWFHVVMK 259
GP++ E+ H + +
Sbjct: 258 YGPEKMSFYEIRQMIHGITQ 277
>gi|189091884|ref|XP_001929775.1| hypothetical protein [Podospora anserina S mat+]
gi|27803052|emb|CAD60755.1| unnamed protein product [Podospora anserina]
gi|188219295|emb|CAP49275.1| unnamed protein product [Podospora anserina S mat+]
Length = 377
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 141/245 (57%), Gaps = 14/245 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L + GGRSS ATVFGA+G +G Y+ N+L +QG +++PYR R L++ GDL
Sbjct: 39 LIRTQGGRSSIGEHTATVFGATGQLGRYIVNRLARQGCTVVVPYREEMAK-RHLKVTGDL 97
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
G+V+F Y RN I +++++S+VV NL+GR + TKNF+ D ++E R+A +
Sbjct: 98 GRVVFVEYDLRNTQSIEESVRHSDVVYNLVGRNYPTKNFSYEDVHIEGAERIAEAVAKYD 157
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++FIH+S+ NADPN S+FY TK + E V FPE TI RP+ M+G D
Sbjct: 158 VDRFIHVSSYNADPN-------HVSEFYSTKGRAEHVVRSIFPETTIVRPAPMFGFEDNL 210
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L + ++F + +K PV+V DV A+ D + A + ++ GPK+Y
Sbjct: 211 LLKLASV-VNLFTSNNMQEKF-----WPVHVIDVGEALEKMLWDDNTAAQTFELYGPKQY 264
Query: 246 LLSEL 250
++E+
Sbjct: 265 AMAEI 269
>gi|396483337|ref|XP_003841683.1| similar to NADH-ubiquinone oxidoreductase 40 kDa subunit
[Leptosphaeria maculans JN3]
gi|312218258|emb|CBX98204.1| similar to NADH-ubiquinone oxidoreductase 40 kDa subunit
[Leptosphaeria maculans JN3]
Length = 388
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 138/241 (57%), Gaps = 14/241 (5%)
Query: 10 TGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVL 69
+GGRSS G ATVFGA+G++G Y+ N+L + G +I+PYR R L++ GDLG+V+
Sbjct: 53 SGGRSSIGGYTATVFGATGFLGRYIVNRLARSGCTVIVPYREEMAK-RHLKVTGDLGRVI 111
Query: 70 FQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129
F RN I +++++S++V NLIGR++ TKNF + D +VE R+A + +++F
Sbjct: 112 FIEMDLRNTQSIEESVRHSDIVYNLIGRDYPTKNFDLEDVHVEGTERIAEAVAKYDIDRF 171
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
+ +S+ +AD N P S+FYRTK +GE+ +PE TI RP+ M+G D+ L
Sbjct: 172 VQVSSHSADVNSP-------SEFYRTKARGEQVARSIYPETTIVRPAPMFGFEDRLLH-- 222
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
R + + + +PV+V DV A+ D A + ++ GP Y ++E
Sbjct: 223 ----RLAYPSYVITANHLQERLRPVHVIDVGMALEQMLHDDTTAAETFELYGPSEYSMAE 278
Query: 250 L 250
L
Sbjct: 279 L 279
>gi|169858077|ref|XP_001835685.1| NADH dehydrogenase [Coprinopsis cinerea okayama7#130]
gi|116503361|gb|EAU86256.1| NADH dehydrogenase [Coprinopsis cinerea okayama7#130]
Length = 366
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G G S+ +G TVFG +G++G YL +KLGK G+Q++ PYR + R L+L GDLGQ+
Sbjct: 38 GPPGYSAVSGHTVTVFGCTGFLGRYLVSKLGKIGTQVVAPYRDE-DESRHLKLMGDLGQI 96
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ + R++ I + +++S+ VINL+GR++ TKNF N R+A+++ E GV +
Sbjct: 97 VRMEWDLRDEKSIAECLRHSDTVINLVGRDYTTKNFDFKQVNALGAERIAKIAAENGVSR 156
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FI +S LNA N P S+FY +K +GE VL FP ATI RPS +YG DK L
Sbjct: 157 FIQVSHLNASENSP-------SKFYASKAEGEARVLEAFPNATIVRPSILYGYEDKLLTN 209
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+W ++ KL ET +P +V DVA A+V ++P +G + GP
Sbjct: 210 MA-IW-PIWWKL----NNAETKIRPAHVMDVAQALVNLVRNPKVSGTV-NLPGPSTLTYE 262
Query: 249 ELLD 252
LLD
Sbjct: 263 YLLD 266
>gi|58266304|ref|XP_570308.1| NADH dehydrogenase (ubiquinone) [Cryptococcus neoformans var.
neoformans JEC21]
gi|134111304|ref|XP_775794.1| hypothetical protein CNBD5230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258458|gb|EAL21147.1| hypothetical protein CNBD5230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226541|gb|AAW43001.1| NADH dehydrogenase (ubiquinone), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 411
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 140/242 (57%), Gaps = 15/242 (6%)
Query: 10 TGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVL 69
TGGRSS +G TVFG++G++ YL KL +QG+Q+I+PYR + R LR CGDLGQ++
Sbjct: 52 TGGRSSDSGRTVTVFGSTGFLARYLIQKLARQGTQVIVPYRDE-DEKRRLRPCGDLGQIV 110
Query: 70 FQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129
+ R ++ + +K+++VV NL+GR++ T+N++ D NV++ +A +S +M + +
Sbjct: 111 PLEWDARIPEQTAECVKHADVVYNLVGRDYETRNYSYDDVNVKVAQSIAEISADMNIPRL 170
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
IH+S +NA+P P S+FYRTKY GE+ V FPEATI RPS ++G D L
Sbjct: 171 IHVSHINANPESP-------SEFYRTKYAGERAVRDAFPEATIVRPSQLFGHEDWLLNAI 223
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-DAAGKIYQAVGPKRYLLS 248
+ L G + PV+V DVA A+ P + + GP+ Y +
Sbjct: 224 AR-----YPILCKLNNGNTKLF-PVHVVDVAQALNLMFDAPVTSTASTFVLPGPELYNYA 277
Query: 249 EL 250
EL
Sbjct: 278 EL 279
>gi|452837903|gb|EME39844.1| hypothetical protein DOTSEDRAFT_74670 [Dothistroma septosporum
NZE10]
Length = 391
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 138/242 (57%), Gaps = 18/242 (7%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G TVFGA+G +G Y+ N++ K G ++IPYR R L++ GDLG+V+F
Sbjct: 57 GGRSSLGGHCVTVFGATGQLGRYIVNRMAKAGCTVVIPYREEMAK-RHLKVTGDLGRVVF 115
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
Y RN I +++++S++V NL+GR++ TKNF + D +VE R+A + ++FI
Sbjct: 116 IEYDLRNTASIEESVRHSDIVYNLVGRDYPTKNFDLEDVHVEGTRRIANAVAKYDCDRFI 175
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ + P P S+F+RTK+QGE+ FPE TI RP+ ++G D+ L
Sbjct: 176 HVSSHSVHPESP-------SEFFRTKWQGEQVAREIFPETTIVRPAPLFGFEDRLL---- 224
Query: 191 HMWRHVFRKLA--VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
H K + G + PV+ DV A+ A D AG+ ++ GPK+Y ++
Sbjct: 225 ----HRLAKATNILTANGMQERLWPVHSIDVGKALEAIGLDDRTAGQTFELFGPKQYTMA 280
Query: 249 EL 250
E+
Sbjct: 281 EI 282
>gi|298710072|emb|CBJ31788.1| NADH dehydrogenase (ubiquinone) [Ectocarpus siliculosus]
Length = 376
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 149/269 (55%), Gaps = 28/269 (10%)
Query: 3 RVHLKK-GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL 61
R HL + G GGRSS N VFGA+G++G ++ N+LG+ G++ IP RG DVR ++
Sbjct: 22 RKHLGQYGAGGRSSVNDKTVAVFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKV 81
Query: 62 CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATK---------------NFTI 106
DLGQV+F Y ++ +R AI ++ V+NLIG+ + TK N +
Sbjct: 82 QFDLGQVVFPFYSSSDEQSMRDAIGNADTVVNLIGKHYETKHLCFTRKEDGAINRVNSSF 141
Query: 107 ADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE 166
+ NV++ LAR +K GV+ F+H+SAL ADP+ P S++ +TK+ GE V
Sbjct: 142 KNVNVDVAGMLARAAKAQGVKNFVHVSALAADPDSP-------SRWAQTKFAGELAVKEA 194
Query: 167 FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226
FPEATI RP+ ++G+ D+ L + M + R + + G+ I QP+ +VA ++A
Sbjct: 195 FPEATIVRPAKLFGNNDRLLTWIALMATRMGR-VPLVNDGDNLI-QPIDARNVAQVLMAI 252
Query: 227 CKDP---DAAGKIYQAVGPKRYLLSELLD 252
+P D GK+ + GP + E+ D
Sbjct: 253 IDNPENLDYRGKLVELAGPGEFSWREVAD 281
>gi|380476735|emb|CCF44549.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Colletotrichum
higginsianum]
Length = 375
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 140/246 (56%), Gaps = 14/246 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG +IIP+R R L++ GDLG+
Sbjct: 38 RTQGGRSSLGGHTATVFGATGQVGRYIVNRLARQGCTVIIPFREEMAK-RHLKVAGDLGR 96
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR + TKNF++ D +VE R+A + V+
Sbjct: 97 VVFIEYDLRNTQSIEESVRHSDVVYNLVGRNYPTKNFSLEDVHVEGTERIAEAVAKYDVD 156
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NA+ + S+FYRTK +GE+ +PE TI RP+ ++G D L
Sbjct: 157 RFIHMSSYNAN-------LESASEFYRTKARGEQVARSIYPETTIVRPAPVFGFEDNLLL 209
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ L +E + PV+ DV A+ D AG+ Y+ GP+ Y +
Sbjct: 210 KLASVM-----NLFTANNMQERFR-PVHSIDVGQALELMLYDDSTAGQTYELYGPQEYSM 263
Query: 248 SELLDW 253
+E+ +
Sbjct: 264 AEIAQF 269
>gi|198418945|ref|XP_002125647.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 alpha
subcomplex, 9, 39kDa [Ciona intestinalis]
Length = 424
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 150/263 (57%), Gaps = 11/263 (4%)
Query: 5 HLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD 64
+L G GGRSSF+GVVATVFG +G++G + N L GS +++PYRG F V+ +L D
Sbjct: 35 YLPSGRGGRSSFSGVVATVFGPTGFIGLSVVNHLAAIGSSLVLPYRGTFERVQRHKLMSD 94
Query: 65 LGQVLFQPYHPRN--DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
LGQ+ + N DD +R+ I++SNVV+NLIG + +++ + NV P RLA+L
Sbjct: 95 LGQMHVREMFNSNASDDRVRELIEHSNVVVNLIGSTKPYRFYSMEEVNVTWPTRLAQLVA 154
Query: 123 EMGV-EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGS 181
E + IH+S LN + + S+ + ++ E+ + +P +TI R S ++G
Sbjct: 155 EKNDGTRLIHLSRLNCHSDEARKH----SEILKQNFEAEQNLKEIYPGSTIVRCSSVHGK 210
Query: 182 GDKFLRYY-GHMWRH---VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIY 237
DKF ++ W + + +Y+ GE TI QPV V DVA + + PDA G+ +
Sbjct: 211 YDKFTTFWLSPRWVSLGMLGSQPLMYEGGESTIIQPVCVSDVAEGVARLARHPDAPGQTF 270
Query: 238 QAVGPKRYLLSELLDWFHVVMKK 260
+ VGP R+ L+E L++ + + +
Sbjct: 271 EFVGPDRFTLNEFLEYVYNCLGR 293
>gi|327349309|gb|EGE78166.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 386
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 142/245 (57%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ N+L QG +I+PYR R L++ GDLG+
Sbjct: 49 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLASQGCTVIVPYREEMAK-RHLKVTGDLGR 107
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN + I +++++S+VV NL+GR++ TKNF+ D +V+ AR+A + + V+
Sbjct: 108 VVFMEYDLRNTESIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKYDVD 167
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NAD +S S+F+RTK GE+ FPE TI RP+ M+G D L
Sbjct: 168 RFIHVSSYNAD-------VSSPSEFFRTKAHGERIARDIFPETTIVRPAPMFGFEDNLLH 220
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++F + ++ PV+ DV A+ + + Y+ GPK Y
Sbjct: 221 KLAGI-TNLFTSNHMQER-----YWPVHAIDVGYALEKMLFTDASVAQTYELYGPKNYST 274
Query: 248 SELLD 252
+E+ +
Sbjct: 275 AEIAE 279
>gi|50421205|ref|XP_459148.1| DEHA2D15312p [Debaryomyces hansenii CBS767]
gi|49654815|emb|CAG87319.1| DEHA2D15312p [Debaryomyces hansenii CBS767]
Length = 380
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 159/308 (51%), Gaps = 28/308 (9%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+V++ G GGRSS G ATVFGASG++G YL +KL + G+ ++P+R + R L++
Sbjct: 35 KVNVSVGHGGRSSRTGYTATVFGASGFLGRYLTSKLARHGTTTVVPFRDDMKK-RFLKVT 93
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V F RN I+ ++ +S++V N IG ++ TKNF++AD N+ + R+ + K
Sbjct: 94 GDLGVVNFVEIDARNLKSIQDSVAHSDIVFNCIGVDYNTKNFSMADVNIGLTERITQAVK 153
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+ GV +F+H+S+ NA+P+ S FY TK GE+ V PE+TI RP+ M+G
Sbjct: 154 DAGVPRFVHVSSYNANPD-------SKSVFYATKGVGEQVVRDILPESTIVRPAPMFGRE 206
Query: 183 DKFLRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
D L Y G MW +Y P++V DVA + D G+ Y+
Sbjct: 207 DNLLNYLGPKLKMWTPNKNAKEIY---------PIHVMDVARGLEKIGFDDSTLGQTYEL 257
Query: 240 VGPKRYLLSELLDWFHVVMKK----GEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGH 295
GP+++ E+ H + + G Y + Y + +PL + L
Sbjct: 258 YGPEKFSYHEIRQMIHGITQNFAQAGPLPYSFADYQIP----LPLAKLVAELKQLVYWKL 313
Query: 296 LTPERVER 303
P+++ER
Sbjct: 314 TNPDQIER 321
>gi|406601351|emb|CCH47011.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Wickerhamomyces ciferrii]
Length = 370
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 155/288 (53%), Gaps = 23/288 (7%)
Query: 4 VHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG 63
V + G GRSS G ATVFGASG++G YL +KL K G+ ++P+R + L++ G
Sbjct: 34 VKIAVGHNGRSSRTGYTATVFGASGFLGRYLTSKLAKNGTITVVPFRDELKS-KFLKVPG 92
Query: 64 DLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKE 123
DLG V F + RN + I +A+KYS++V NLIG ++ T+NFT AD N+E R+A+ +K+
Sbjct: 93 DLGVVNFVEFDIRNLESINEAVKYSDIVYNLIGVDYDTRNFTQADVNIEAARRIAQATKD 152
Query: 124 MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGD 183
GV + +H+S+ NADP + + F+ TK E V +P+ATI RP+ MYG D
Sbjct: 153 HGVPRLVHVSSYNADP-------TADNIFFATKGHSEAAVRAIYPDATIVRPAPMYGRED 205
Query: 184 KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
K L + + ET+ P +V DVA A+ D G+ ++ G +
Sbjct: 206 KLLNVLAEVT-----SFFTFNHNRETL-YPAHVLDVATALEKIGFDDSTTGQTFELYGQE 259
Query: 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGY 291
++ + ++ D V ++ Y ++ D L L ++ + PG+
Sbjct: 260 QFSIKQIRDLIEPVTRR-----DYKNLNVPKD----LGLLLSKVLPGF 298
>gi|259481738|tpe|CBF75541.1| TPA: NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
(AFU_orthologue; AFUA_6G12790) [Aspergillus nidulans
FGSC A4]
Length = 382
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 139/245 (56%), Gaps = 14/245 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L K GGR S G ATVFGA+G++G Y+ NKL QG +++PYR R L++ GDL
Sbjct: 43 LLKIQGGRHSLGGHTATVFGATGFLGRYIVNKLATQGCTVVVPYREEMAK-RHLKVTGDL 101
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
G+V+F Y RN I +++++S+VV NL+GR++ TKNF+ D +V+ R+A +
Sbjct: 102 GRVVFIEYDLRNTQSIEESVRHSDVVYNLVGRDYPTKNFSYTDVHVDGTERIAEAVAKYD 161
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++FIH+S+ NA+ N P S+F+ TK GE+ FPE TI RP+ ++G D+
Sbjct: 162 VDRFIHVSSYNANKNSP-------SEFFSTKGWGEEVARSIFPETTIVRPAPLFGFEDRL 214
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L ++F + ++ PV+ DV A+ D AG+ ++ GP Y
Sbjct: 215 LHKLASA-TNLFTANHLQQRS-----WPVHAIDVGTALERMLHDDTTAGQTFELYGPTNY 268
Query: 246 LLSEL 250
L+E+
Sbjct: 269 SLAEI 273
>gi|67526521|ref|XP_661322.1| hypothetical protein AN3718.2 [Aspergillus nidulans FGSC A4]
gi|40740736|gb|EAA59926.1| hypothetical protein AN3718.2 [Aspergillus nidulans FGSC A4]
Length = 779
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 139/245 (56%), Gaps = 14/245 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L K GGR S G ATVFGA+G++G Y+ NKL QG +++PYR R L++ GDL
Sbjct: 110 LLKIQGGRHSLGGHTATVFGATGFLGRYIVNKLATQGCTVVVPYREEMAK-RHLKVTGDL 168
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
G+V+F Y RN I +++++S+VV NL+GR++ TKNF+ D +V+ R+A +
Sbjct: 169 GRVVFIEYDLRNTQSIEESVRHSDVVYNLVGRDYPTKNFSYTDVHVDGTERIAEAVAKYD 228
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++FIH+S+ NA+ N P S+F+ TK GE+ FPE TI RP+ ++G D+
Sbjct: 229 VDRFIHVSSYNANKNSP-------SEFFSTKGWGEEVARSIFPETTIVRPAPLFGFEDRL 281
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L ++F + ++ PV+ DV A+ D AG+ ++ GP Y
Sbjct: 282 LHKLASA-TNLFTANHLQQRS-----WPVHAIDVGTALERMLHDDTTAGQTFELYGPTNY 335
Query: 246 LLSEL 250
L+E+
Sbjct: 336 SLAEI 340
>gi|405120398|gb|AFR95169.1| NADH dehydrogenase [Cryptococcus neoformans var. grubii H99]
Length = 411
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 139/242 (57%), Gaps = 15/242 (6%)
Query: 10 TGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVL 69
TGGRSS +G TVFG++G++ YL KL +QG+Q+I+PYR + R LR CGDLGQ++
Sbjct: 52 TGGRSSDSGRTVTVFGSTGFLARYLIQKLARQGTQVIVPYRDE-DEKRRLRPCGDLGQIV 110
Query: 70 FQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129
+ R ++ + +K+++VV NL+GR++ T+N++ D NV++ +A +S ++ + +
Sbjct: 111 PLEWDARIPEQTAECVKHADVVYNLVGRDYETRNYSYDDVNVKVAQSIAEISADLNIPRL 170
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
IH+S +NA+P S+FYRTKY GE+ V FPEATI RPS ++G D L
Sbjct: 171 IHVSHINANPE-------STSEFYRTKYAGERAVRDAFPEATIVRPSQLFGHEDWLLNAI 223
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-DAAGKIYQAVGPKRYLLS 248
F L G + PV+V DVA A+ P + + GP+ Y +
Sbjct: 224 AR-----FPILCKLNNGNTKLF-PVHVVDVAQALNLMFDAPVTSTASTFVLPGPELYNYA 277
Query: 249 EL 250
EL
Sbjct: 278 EL 279
>gi|242789921|ref|XP_002481461.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Talaromyces stipitatus ATCC 10500]
gi|218718049|gb|EED17469.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Talaromyces stipitatus ATCC 10500]
Length = 382
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 139/245 (56%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ N+L + G +++P+R R L++ GDLG+
Sbjct: 45 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLARAGCTVVVPFREEMTK-RHLKVSGDLGR 103
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR++ TKNFT D +V+ R+A + V+
Sbjct: 104 VVFMEYDLRNTQSIEESVRHSDVVFNLVGRQYPTKNFTYEDVHVDGAERIAEAVAKYDVD 163
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NA + P S+++RTK GE+ V FPE TI RP+ M+G D L
Sbjct: 164 RFIHVSSYNAAEDSP-------SEYFRTKGWGERVVREIFPETTIVRPAPMFGFEDNLL- 215
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
H V E+ PV+ DV A+ D + A + ++ GPK+Y
Sbjct: 216 ---HKLAGVTNLFTANHMKEKY--WPVHAIDVGTALERMAYDDNTASQTFELYGPKQYST 270
Query: 248 SELLD 252
+E+ +
Sbjct: 271 AEIAE 275
>gi|239608124|gb|EEQ85111.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Ajellomyces
dermatitidis ER-3]
Length = 462
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 142/245 (57%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ N+L QG +I+PYR R L++ GDLG+
Sbjct: 125 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLASQGCTVIVPYREEMAK-RHLKVTGDLGR 183
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN + I +++++S+VV NL+GR++ TKNF+ D +V+ AR+A + + V+
Sbjct: 184 VVFMEYDLRNTESIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKYDVD 243
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NAD +S S+F+RTK GE+ FPE TI RP+ M+G D L
Sbjct: 244 RFIHVSSYNAD-------VSSPSEFFRTKAHGERIARDIFPETTIVRPAPMFGFEDNLLH 296
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++F + ++ PV+ DV A+ + + Y+ GPK Y
Sbjct: 297 KLAGI-TNLFTSNHMQER-----YWPVHAIDVGYALEKMLFTDASVAQTYELYGPKNYST 350
Query: 248 SELLD 252
+E+ +
Sbjct: 351 AEIAE 355
>gi|367032388|ref|XP_003665477.1| hypothetical protein MYCTH_2309275 [Myceliophthora thermophila ATCC
42464]
gi|347012748|gb|AEO60232.1| hypothetical protein MYCTH_2309275 [Myceliophthora thermophila ATCC
42464]
Length = 377
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 141/247 (57%), Gaps = 14/247 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L + TGGRSS ATVFGA+G +G Y+ N+L +QG +++PYR R L+L GDL
Sbjct: 38 LIRVTGGRSSLGEHTATVFGATGQLGRYIVNRLARQGCTVVVPYREEMAK-RHLKLTGDL 96
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
G+V+F Y RN I +++++S+VV NL+GR + TKNF++AD ++E R+ +
Sbjct: 97 GRVVFMEYDLRNTQSIEESVRHSDVVYNLVGRNYPTKNFSLADVHIEGTERIVEAVAKYD 156
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V+++IH+S+ NA+P S+F+ TK GEK FPE TI RP+ M+G D
Sbjct: 157 VDRYIHVSSYNANP-------ESTSEFFATKGYGEKVAREIFPETTIVRPAPMFGFEDNL 209
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L + ++F + ++ PV+V DV A+ D + A + ++ GPK Y
Sbjct: 210 LLKLASV-TNLFTANNMQER-----YWPVHVIDVGEALEKMLFDDNTAAQTFELYGPKNY 263
Query: 246 LLSELLD 252
+E+ +
Sbjct: 264 STAEIAE 270
>gi|255946876|ref|XP_002564205.1| Pc22g01610 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591222|emb|CAP97449.1| Pc22g01610 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 382
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 144/247 (58%), Gaps = 14/247 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L K GGRSS G ATVFGA+G++G Y+ NKL +QG +++PYR R L++ GDL
Sbjct: 42 LLKVQGGRSSIGGHTATVFGATGFLGRYIVNKLARQGCTVVVPYREEMAK-RHLKVTGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
G+V+F Y RN I +++++S+VV NL+GR++ TKNF+ D +V+ R+A +
Sbjct: 101 GRVVFMEYDLRNTQSIEESVRHSDVVYNLVGRQYPTKNFSYEDVHVDGVERIADAVAKYD 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++FIH+S+ NA + P S+++ TK GE+ V + +PE TI RP+ M+G D
Sbjct: 161 VDRFIHVSSYNARRDSP-------SEYFATKAWGEEIVRKIYPETTIVRPAPMFGFEDNL 213
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L + +VF + ++ PV+ DV +A+ D AG+ ++ GPK Y
Sbjct: 214 LHKLAKVG-NVFTANHMQER-----YWPVHAIDVGSALERMLHDDSTAGETFELYGPKNY 267
Query: 246 LLSELLD 252
+E+ +
Sbjct: 268 STAEIAE 274
>gi|402080092|gb|EJT75237.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 374
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 141/245 (57%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG +++P+R R L++ GDLG+
Sbjct: 38 RTQGGRSSLGGHTATVFGATGQVGRYIVNRLARQGCTVVVPFREEMAK-RHLKVAGDLGR 96
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR + TKNF++ D +VE R+A + V+
Sbjct: 97 VVFIEYDLRNTASIEESVRHSDVVYNLVGRNYPTKNFSLEDVHVEGAERIAEAVAKYDVD 156
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NA+ + P S+F+RTK +GE+ V FPE TI RP+ ++G D+ L
Sbjct: 157 RFIHMSSYNANLDSP-------SEFFRTKARGEQVVRSIFPETTIVRPAPIFGFEDRLLL 209
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ L +E PV+ DV A+ D A + Y+ GPK Y +
Sbjct: 210 KLASVL-----NLFTANNMQERF-WPVHSIDVGRALEKMLYDDSTASQTYELHGPKNYSM 263
Query: 248 SELLD 252
+E+ +
Sbjct: 264 AEIAE 268
>gi|390602980|gb|EIN12372.1| NAD(P)-binding protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 362
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 144/250 (57%), Gaps = 17/250 (6%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GRS+ +G VATVFG +G++G Y+ KL K G+Q+I+PYR + ++R L+ GDLGQ+
Sbjct: 40 GPPGRSAVSGHVATVFGCTGFLGRYVVAKLAKIGTQVIVPYR-DEDEIRVLKPMGDLGQI 98
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ + RN +I + +++S+ V NL+GR++ TKNF+ D +V + +A+++ + GV +
Sbjct: 99 VPLEWDIRNIAQIEQCLRHSDTVYNLVGRDYPTKNFSYTDVHVTGASTIAKVAADNGVSR 158
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
F+H+S LNAD + P S+ YR K GE+ V FP+ATI RPS M+G DK L
Sbjct: 159 FVHVSHLNADHDSP-------SELYRAKAAGEEAVTAAFPDATILRPSAMFGHEDKLL-- 209
Query: 189 YGHMWRHVFRKLAVYKKGE-ETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
VF +K + +T +PV+V DVA A P AG + GP+
Sbjct: 210 -----NSVFNWPIWFKLNDMQTKVRPVHVLDVAQAAANLLSTPAHAGAL-NLPGPRTVTY 263
Query: 248 SELLDWFHVV 257
LLD V
Sbjct: 264 EYLLDLVSTV 273
>gi|367047327|ref|XP_003654043.1| hypothetical protein THITE_2116621 [Thielavia terrestris NRRL 8126]
gi|347001306|gb|AEO67707.1| hypothetical protein THITE_2116621 [Thielavia terrestris NRRL 8126]
Length = 376
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 142/247 (57%), Gaps = 14/247 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L + GGRSS ATVFGA+G +G Y+ N+L +QG +I+PYR R L+L GDL
Sbjct: 37 LVRTQGGRSSLGEHTATVFGATGQLGRYIVNRLARQGCTVIVPYREEMAK-RHLKLTGDL 95
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
G+V+F + RN I +++++S+VV NLIGR + TKNF++ D ++E R+A +
Sbjct: 96 GRVVFTEFDLRNTQSIEESVRHSDVVYNLIGRNYPTKNFSLEDVHIEGAERIAEAVAKYD 155
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++FIH+S+ NA+P+ S+F+ TK E+ V FPE TI RP+ M+G DK
Sbjct: 156 VDRFIHVSSYNANPD-------STSEFFATKGYAERVVREIFPETTIVRPAPMFGFEDKL 208
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L + ++F + ++ PV+V DV A+ D + A + ++ GP+ Y
Sbjct: 209 LLKLASV-TNLFTANNMQER-----YWPVHVIDVGEALEKMLFDDNTASQTFELYGPRNY 262
Query: 246 LLSELLD 252
+E+ +
Sbjct: 263 STAEIAE 269
>gi|387193143|gb|AFJ68688.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9
[Nannochloropsis gaditana CCMP526]
Length = 373
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 150/269 (55%), Gaps = 26/269 (9%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS G+ A++FG +G++G YL +LGK G ++ + RG+ DVR ++ DLGQ
Sbjct: 30 GPGGRSSVAGITASLFGGTGFLGKYLQFELGKTGFRLYLANRGDEQDVRAYKVAFDLGQW 89
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATK---------------NFTIADANVEI 113
PY R++D I++ ++ S++ IN IG+ + TK NF++ + ++E
Sbjct: 90 ASVPYSLRDEDSIKRVLEGSDIAINCIGKYYDTKHLVPHRDASGKLSNVNFSLEEIHIEA 149
Query: 114 PARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIF 173
PA+LA L+K +GV F+H+SAL AD + P +++ TK QGE+ + FP ATI
Sbjct: 150 PAKLAELAKSVGVSHFLHVSALGADKDSPVRWLA-------TKGQGEEALKSVFPRATIV 202
Query: 174 RPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-DA 232
RP ++G D+ L ++ F + ++ G + QP Y DV A+V +DP D
Sbjct: 203 RPGRLFGPEDRLLNWFAQN-AASFGVIPLFNGGNALL-QPTYASDVVDAMVKIIEDPEDY 260
Query: 233 AGKIYQAVGPKRYLLSELLDW-FHVVMKK 260
GK ++ G + EL+D+ F + +K
Sbjct: 261 EGKTFELAGEHNFTWRELMDFTFDITYQK 289
>gi|401883097|gb|EJT47332.1| NADH dehydrogenase (ubiquinone) [Trichosporon asahii var. asahii
CBS 2479]
gi|406700246|gb|EKD03421.1| NADH dehydrogenase (ubiquinone) [Trichosporon asahii var. asahii
CBS 8904]
Length = 411
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 141/254 (55%), Gaps = 17/254 (6%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
GGRS+ +G TVFG +G++G Y+ +KL K+G+Q+I+PYR R L++ GDLG V
Sbjct: 48 SNGGRSAVSGHTVTVFGCTGFLGRYIVSKLAKEGTQVIVPYRDEDKK-RHLKVTGDLGVV 106
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ + RN D+I + +++S+ V NL G ++ ++NF+ D NV+ +A + + V++
Sbjct: 107 VPLEWDARNPDQIHECVRHSDTVYNLTGLDWESRNFSYEDVNVKTAGLIAEVCAQSNVDQ 166
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
IH+S LNA+PN S+FYRTKY GE+ V FP+ATI RP M+G+ D FL
Sbjct: 167 LIHVSHLNANPN-------SSSRFYRTKYDGERAVRNAFPDATIVRPGPMFGAEDWFLNA 219
Query: 189 YGHMWRHVFRKLAVYK-KGEETIKQPVYVGDVAAAIVAACKDP-DAAGKIYQAVGPKRYL 246
A++K G T PV+V DVA A+ P + + GP
Sbjct: 220 AAQY-------PALFKLNGGNTKFMPVHVLDVAKALKVMLDAPVTSVASTFHLAGPAIKT 272
Query: 247 LSELLDWFHVVMKK 260
+E+LD ++ K
Sbjct: 273 GNEILDLVSLLTMK 286
>gi|121700136|ref|XP_001268333.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Aspergillus clavatus NRRL 1]
gi|119396475|gb|EAW06907.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Aspergillus clavatus NRRL 1]
Length = 382
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 136/242 (56%), Gaps = 14/242 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G ATVFGA+G++G Y+ NKL QG +++PYR R L+ GDLG+V+F
Sbjct: 48 GGRSSLGGFTATVFGATGFLGRYIVNKLANQGCTVVVPYREEMTK-RHLKPTGDLGRVVF 106
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
Y RN I +++++S+VV NL+GR++ TKNF+ D +V+ R+A + V++FI
Sbjct: 107 IEYDLRNTQSIEESVRHSDVVYNLVGRQYPTKNFSYTDVHVDGTERIADAVAKYDVDRFI 166
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ NA + P S+F+ TK GE+ V +PE TI RP+ M+G D L
Sbjct: 167 HVSSYNAAKDSP-------SEFFSTKGWGEEVVRSIYPETTIVRPAPMFGFEDNLL---- 215
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
H L E PV+ DV A+ +D AG+ ++ GPK Y ++E+
Sbjct: 216 HKLASATNLLTANHMQERF--WPVHAIDVGTALERMLQDDTTAGETFELYGPKNYSVAEI 273
Query: 251 LD 252
+
Sbjct: 274 AE 275
>gi|164427064|ref|XP_959794.2| NADH:ubiquinone oxidoreductase 40kD subunit [Neurospora crassa
OR74A]
gi|157071590|gb|EAA30558.2| NADH:ubiquinone oxidoreductase 40kD subunit [Neurospora crassa
OR74A]
Length = 369
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 138/243 (56%), Gaps = 20/243 (8%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG ++IP+R Y+ R L++ GDLG+
Sbjct: 41 RNQGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVIPFRDE-YNKRHLKVTGDLGK 99
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+ + RN I +++++S+VV NLIGR++ TKNF+ D ++E R+A + V+
Sbjct: 100 VVMIEFDLRNTQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAEAVAKYDVD 159
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NADPN +F+ TK +GE+ V FPE TI RP+ M+G D+ L
Sbjct: 160 RFIHVSSYNADPN-------SECEFFATKARGEQVVRSIFPETTIVRPAPMFGFEDRLLH 212
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ K + G + PV+ A+ D + A + ++ GPK Y
Sbjct: 213 KLASV------KNILTSNGMQEKYNPVH------ALEQMLWDDNTASETFELYGPKTYTT 260
Query: 248 SEL 250
+E+
Sbjct: 261 AEI 263
>gi|261203687|ref|XP_002629057.1| NADH:ubiquinone oxidoreductase 40kD subunit [Ajellomyces
dermatitidis SLH14081]
gi|239586842|gb|EEQ69485.1| NADH:ubiquinone oxidoreductase 40kD subunit [Ajellomyces
dermatitidis SLH14081]
Length = 386
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 141/245 (57%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ N+L QG +I+PYR R L++ GDLG+
Sbjct: 49 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLASQGCTVIVPYREEMAK-RHLKVTGDLGR 107
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S+VV NL+GR++ TKNF+ D +V+ AR+A + + V+
Sbjct: 108 VVFMEYDLRNTVSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKYDVD 167
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NAD +S S+F+RTK GE+ FPE TI RP+ M+G D L
Sbjct: 168 RFIHVSSYNAD-------VSSPSEFFRTKAHGERIARDIFPETTIVRPAPMFGFEDNLLH 220
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++F + ++ PV+ DV A+ + + Y+ GPK Y
Sbjct: 221 KLAGI-TNLFTSNHMQER-----YWPVHAIDVGYALEKMLFTDASVAQTYELYGPKNYST 274
Query: 248 SELLD 252
+E+ +
Sbjct: 275 AEIAE 279
>gi|384253270|gb|EIE26745.1| NAD(P)-binding protein [Coccomyxa subellipsoidea C-169]
Length = 378
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 150/258 (58%), Gaps = 13/258 (5%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LK G GGRSS +GV ATVFG SG++G Y+ N L +QG+Q+++PYR + DV+ LR GDL
Sbjct: 31 LKAGPGGRSSISGVTATVFGCSGFLGRYIVNALARQGTQVVVPYRRDELDVQYLRQMGDL 90
Query: 66 GQVL-FQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM 124
GQ+ ++ ++ R+D I+ AIK SNV+INL G + T NF+ D +++ R+A+ + +
Sbjct: 91 GQIYQWKDFNIRDDSHIKDAIKRSNVIINLTGLDKETWNFSFEDVHIDAATRIAQAAADN 150
Query: 125 GV-EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGD 183
+ E+F+ S + A N S+ RTK G+ V P AT+F+P + G+ D
Sbjct: 151 PLTERFVQFSCIGASEN-------AASRRLRTKAAGDAAVRSILPYATVFKPGHVVGTED 203
Query: 184 KFLRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
+ Y M + V F L G ET QP YV DVA A++ + K +A GK Y GP
Sbjct: 204 RMYNIYATMAKQVPFIPLV---GGGETKLQPTYVRDVADAVIHSLKTKEALGKEYFLAGP 260
Query: 243 KRYLLSELLDWFHVVMKK 260
+ + ++++ + +++
Sbjct: 261 EVLTVKQIVELVYTTIRE 278
>gi|154277898|ref|XP_001539781.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor [Ajellomyces capsulatus NAm1]
gi|150413366|gb|EDN08749.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor [Ajellomyces capsulatus NAm1]
Length = 345
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 138/236 (58%), Gaps = 14/236 (5%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR 76
+G ATVFGA+G++G Y+ N+L QG +I+PYR R L++ GDLG+V+F Y R
Sbjct: 17 DGHTATVFGATGFLGRYIVNRLASQGCTVIVPYREEMAK-RHLKVTGDLGRVVFMEYDLR 75
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
N I +++++S+VV NL+GR++ TKNF+ D +V+ AR+A + + V++FIH+S+ N
Sbjct: 76 NTQSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKYDVDRFIHVSSYN 135
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P S+F+RTK QGEK FPE TI RP+ M+G D L + ++
Sbjct: 136 ADMNSP-------SEFFRTKAQGEKLARMLFPETTIVRPAPMFGFEDNLLHKLAGI-TNL 187
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
F + ++ PV+ DV A+ + G+ Y+ GPK Y +E+ +
Sbjct: 188 FTSNHMRER-----YWPVHAIDVGHALEKMLFTDSSVGQTYELYGPKNYSTAEIAE 238
>gi|452977911|gb|EME77675.1| hypothetical protein MYCFIDRAFT_145481 [Pseudocercospora fijiensis
CIRAD86]
Length = 383
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 29/266 (10%)
Query: 2 CRVHLK------------KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPY 49
CR H++ + GGRSS G TVFGA+G++G Y+ N++ + G+ ++IP+
Sbjct: 28 CRRHIQDIAITRTGKPIIRTPGGRSSLGGHTVTVFGATGFLGRYIVNRMARAGNTVVIPF 87
Query: 50 RGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADA 109
R R L++ GDLG+V+ Y RN I +++++S++V NL+GR++ TKNF + D
Sbjct: 88 REEMAK-RHLKVTGDLGRVVMIEYDLRNTGSIEESVRHSDIVFNLVGRDYPTKNFDLEDV 146
Query: 110 NVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPE 169
+VE R+A + V++FIH+S+ + P P S+F+RTK++GE+ FPE
Sbjct: 147 HVEGTHRIASAVAKYDVDRFIHLSSHSVHPESP-------SEFFRTKWRGEQVAREIFPE 199
Query: 170 ATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229
TI RP+ ++G D+ L H L E PV+ DV A+ A D
Sbjct: 200 TTIVRPAPIFGFEDRLL----HRLARATNVLTANNLQERF--WPVHSIDVGKALEAIAMD 253
Query: 230 PDAAGKIYQAVGPKRYLL---SELLD 252
AG+ ++ GPK Y + SEL+D
Sbjct: 254 DSTAGQTFELYGPKEYSMKEISELVD 279
>gi|154289498|ref|XP_001545366.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Botryotinia
fuckeliana B05.10]
Length = 251
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G++G Y+ N+L +QG +IIP+R R L++ GDLG+
Sbjct: 46 RTQGGRSSLGGHTATVFGATGFLGRYIVNRLARQGCTVIIPFREEMAK-RHLKVSGDLGR 104
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN + +++++S+VV NL+GR + TKNF + D +VE R+A + V+
Sbjct: 105 VIFMEYDLRNTQSLEESVRHSDVVYNLVGRNYPTKNFDLEDVHVEGAERIADAVAKYDVD 164
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
+FIH+S+ NADPN P S+FYRTK +GE+ V FPE TI RP+ ++G D+ L
Sbjct: 165 RFIHLSSYNADPNSP-------SEFYRTKARGEEVVRSIFPETTIVRPAPLFGFEDRLL 216
>gi|393213377|gb|EJC98873.1| NADH dehydrogenase [Fomitiporia mediterranea MF3/22]
Length = 365
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 139/246 (56%), Gaps = 19/246 (7%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GRS+ G TVFG++G++ YL +K+ K G+++I+PYR + R L++ GDLGQ+
Sbjct: 39 GPPGRSAVTGHTVTVFGSTGFLARYLISKIAKSGTRVIVPYREE-DEKRHLKVMGDLGQI 97
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ + RN+ +I + +++S+ V NL+GR + TKNF D +V A +AR++ E GV+
Sbjct: 98 IPLEWDMRNEQQIAECLRHSDTVYNLVGRNYETKNFNFHDVHVNGAASIARIAAENGVDN 157
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA PN P S+FY TKY+GE V FP AT+ RP+ M+G D+ L
Sbjct: 158 FIHVSHLNAAPNSP-------SKFYATKYEGELRVQEAFPGATVVRPATMFGYEDRLLTN 210
Query: 189 YGH--MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
+W + +G+ I+ PV+V DVA A+ P G+ GP
Sbjct: 211 MARWPIWWGL-------NQGDTKIR-PVHVMDVAQALTNLLSKP-PVGRTLSLPGPSTLT 261
Query: 247 LSELLD 252
LL+
Sbjct: 262 HEYLLE 267
>gi|449549106|gb|EMD40072.1| hypothetical protein CERSUDRAFT_112285 [Ceriporiopsis subvermispora
B]
Length = 368
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 144/246 (58%), Gaps = 15/246 (6%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++ G GRS+ G VATVFG +G++G YL +KL K G+Q+IIPYR R L++ GDL
Sbjct: 36 IRYGPPGRSAVTGNVATVFGCTGFLGRYLVSKLAKMGTQVIIPYREEDAK-RHLKVTGDL 94
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++ + R++D+I + +++S++V NL+GR++ TKNF + E AR+A ++ G
Sbjct: 95 GQIVSMEWDLRSEDQIEECVRHSDIVYNLVGRDYETKNFDHDAVHAEGAARIAEVAARAG 154
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V +F+H+S LNA S S+FYRTK +GE+ V FP ATI RP +YG DKF
Sbjct: 155 VPRFVHVSHLNASE-------SSLSKFYRTKARGEEYVRGAFPNATIVRPGPLYGYEDKF 207
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
L +W ++ KL T +PV+V DVA A+ A +D + + GP
Sbjct: 208 LNNMA-VW-PIWWKL----NHAATTVRPVHVFDVAQAL-ANLQDVASLPGTFNLPGPSTL 260
Query: 246 LLSELL 251
+ LL
Sbjct: 261 TVDYLL 266
>gi|406861149|gb|EKD14204.1| NADH-ubiquinone oxidoreductase subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 384
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 136/245 (55%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G TVFGA+G++G Y+ N++ +QG +IIPYR R L++ GDLG+
Sbjct: 47 RTQGGRSSLGGHTVTVFGATGFLGRYIVNRIARQGCTVIIPYREEMAK-RHLKVAGDLGR 105
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN + +++++S+VV NL+GR + TKNF + D +VE R+A + V+
Sbjct: 106 VIFMEYDLRNTASLEESVRHSDVVYNLVGRMYPTKNFDLEDVHVEGVERIAEAVAKYDVD 165
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NA+ N P S+F+ TK +GE FPE TI RP+ ++G D+ L
Sbjct: 166 RFIHVSSYNANVNSP-------SEFFSTKGRGEAVARSIFPETTIVRPAPLFGFEDRLL- 217
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
H V L E PV+ DV A+ D A + Y+ GPK Y
Sbjct: 218 ---HKLAGVTNVLTSNHMQERY--WPVHAIDVGEALEKMLHDDSTAEQTYELYGPKNYST 272
Query: 248 SELLD 252
+E+ +
Sbjct: 273 AEIAE 277
>gi|392565904|gb|EIW59080.1| NADH dehydrogenase [Trametes versicolor FP-101664 SS1]
Length = 367
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 143/255 (56%), Gaps = 15/255 (5%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+ + +G GRS+ G VATVFG +G++G Y+ KL K G+Q+I+PYR + R L++
Sbjct: 32 KAAIAQGPPGRSATTGHVATVFGCTGFLGRYVVAKLAKAGTQVIVPYRDE-DEKRHLKVT 90
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLGQ++ + R D+I + +++S++V NL+GRE+ TKNF+ D +V+ +A L+
Sbjct: 91 GDLGQIVSMEWDLRRPDQIDECLRHSDIVYNLVGREYETKNFSYEDVHVKGAEAIASLAT 150
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+ GV++F+H+S LNA + P S FYRTK GE+ V FP ATI RPS M+G
Sbjct: 151 QAGVDRFVHVSHLNAAHDSP-------SAFYRTKAVGEERVKEAFPNATIIRPSIMFGYE 203
Query: 183 DKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
D+ L W ++ KL + T +PV+ DVA A+ + P G Y GP
Sbjct: 204 DRLLNNVA-FW-PIWWKLNHMR----TKVRPVHALDVAQALANVIQIPSMPGT-YNLPGP 256
Query: 243 KRYLLSELLDWFHVV 257
LL V
Sbjct: 257 SEMTYEYLLTLVSTV 271
>gi|254571035|ref|XP_002492627.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032425|emb|CAY70448.1| hypothetical protein PAS_chr3_1188 [Komagataella pastoris GS115]
gi|308152242|emb|CBI83540.1| NUEM (39 kDa) subunit of mitochondrial NADH:ubiquinone
oxidoreductase (complex I) [Komagataella pastoris]
Length = 384
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 144/269 (53%), Gaps = 23/269 (8%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L G GGRSS G ATVFG +G++G + +KL K G+ +++P+R N R L++ GDL
Sbjct: 27 LSVGQGGRSSRTGFTATVFGGTGFLGRVVVSKLAKHGTNVVVPFR-NDRARRQLKVNGDL 85
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
G V F + RN I ++KYS++VINLIG E +KNF+I D N+ R+A+ +KE G
Sbjct: 86 GVVNFVEFDIRNLKSIEDSVKYSDIVINLIGTEHFSKNFSIEDVNIGAAERIAKAAKEAG 145
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREF-PEATIFRPSDMYGSGDK 184
V + IH+S+ NA+P S S FY TK GE+ V F P+ATI RP+ MY
Sbjct: 146 VSRLIHVSSYNANP-------SSSSDFYATKGIGEQVVRDNFGPDATIVRPAPMYFRNSP 198
Query: 185 FLRYYGHMWR---HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
FL + +V K VY PV+ V AI D AG+ Y+ G
Sbjct: 199 FLNELLQIKALGGNVIFKKEVY---------PVHALQVGEAIERIAFDDATAGQTYELFG 249
Query: 242 PKRYLLSELLDWFHVVMKKGEPDYGYYRY 270
+RY EL + ++ G+ GYY Y
Sbjct: 250 KERYSKKELREMIKHIIHIGQ--RGYYPY 276
>gi|325181760|emb|CCA16216.1| NADH dehydrogenase putative [Albugo laibachii Nc14]
Length = 344
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 141/249 (56%), Gaps = 17/249 (6%)
Query: 12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQ 71
GR NG+ TVFG +G++G Y+C +LG++G I+ PYRG+ +V +R+ DLG
Sbjct: 17 GRVQGNGLTVTVFGCTGFIGRYVCAELGEKGHTIVAPYRGDISEVNHIRVMADLGNTASV 76
Query: 72 PYHPRNDDEIRKAIKYSNVVINLIGREFATK-------NFTIADANVEIPARLARLSKEM 124
P+ R+ +R+A+K S+VV+NLIG+ + TK N+T D +V +AR+ E
Sbjct: 77 PFSARDPASVREAVKGSDVVLNLIGKHYQTKHLLPWWINYTYDDVHVHAAETIARVCAEE 136
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
+ +FIH+S++ A PN P+ + + +KY+GE V + FP+A I R +YG D+
Sbjct: 137 KIPRFIHVSSILAKPNSPSIWAA-------SKYRGEIAVRKAFPKANIVRLGAIYGPEDR 189
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L + + R + + G+ + QP +V DVAAA+ A D G+ ++ VG ++
Sbjct: 190 LLNWIAN--RMQIGGVPLVDNGDAVL-QPAFVNDVAAALYAMTIDEYMTGETFELVGDEK 246
Query: 245 YLLSELLDW 253
Y EL D+
Sbjct: 247 YTAKELADY 255
>gi|302689553|ref|XP_003034456.1| hypothetical protein SCHCODRAFT_14900 [Schizophyllum commune H4-8]
gi|300108151|gb|EFI99553.1| hypothetical protein SCHCODRAFT_14900 [Schizophyllum commune H4-8]
Length = 363
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 135/225 (60%), Gaps = 14/225 (6%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ +G G S+ +G TVFG +G++G YL +KLGK G+Q+ +PYR R L+ GDL
Sbjct: 36 IAQGIPGYSAVSGHRVTVFGCTGFLGRYLVSKLGKIGTQVTVPYRDEDTK-RHLKPMGDL 94
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++ + RN+ +I + +++S++V NL+GR++ TKNF + + + AR+A ++K+ G
Sbjct: 95 GQIVPLEWDIRNEQQIAECLRHSDIVYNLVGRDYETKNFNYSAVHADGAARIAHIAKQEG 154
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+ +H+S LNA P+ S FYR K++GE+ V FPEATI RPS MYG DK
Sbjct: 155 VERLVHVSHLNAAPD-------SKSAFYRAKFEGEERVKEAFPEATIIRPSIMYGYEDKL 207
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230
L +W +R +T +PV+V DVA A+ + P
Sbjct: 208 LNNMA-IWPIYWR-----LNQSQTKVRPVHVMDVAQALANLMEMP 246
>gi|328353367|emb|CCA39765.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Komagataella
pastoris CBS 7435]
Length = 757
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 144/269 (53%), Gaps = 23/269 (8%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
L G GGRSS G ATVFG +G++G + +KL K G+ +++P+R N R L++ GDL
Sbjct: 400 LSVGQGGRSSRTGFTATVFGGTGFLGRVVVSKLAKHGTNVVVPFR-NDRARRQLKVNGDL 458
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
G V F + RN I ++KYS++VINLIG E +KNF+I D N+ R+A+ +KE G
Sbjct: 459 GVVNFVEFDIRNLKSIEDSVKYSDIVINLIGTEHFSKNFSIEDVNIGAAERIAKAAKEAG 518
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREF-PEATIFRPSDMYGSGDK 184
V + IH+S+ NA+P S S FY TK GE+ V F P+ATI RP+ MY
Sbjct: 519 VSRLIHVSSYNANP-------SSSSDFYATKGIGEQVVRDNFGPDATIVRPAPMYFRNSP 571
Query: 185 FLRYYGHMWR---HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
FL + +V K VY PV+ V AI D AG+ Y+ G
Sbjct: 572 FLNELLQIKALGGNVIFKKEVY---------PVHALQVGEAIERIAFDDATAGQTYELFG 622
Query: 242 PKRYLLSELLDWFHVVMKKGEPDYGYYRY 270
+RY EL + ++ G+ GYY Y
Sbjct: 623 KERYSKKELREMIKHIIHIGQ--RGYYPY 649
>gi|169617642|ref|XP_001802235.1| hypothetical protein SNOG_12004 [Phaeosphaeria nodorum SN15]
gi|111059296|gb|EAT80416.1| hypothetical protein SNOG_12004 [Phaeosphaeria nodorum SN15]
Length = 388
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 136/242 (56%), Gaps = 14/242 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G ATVFGA+G++G Y+ N+L + G +IIP+R R L++ GDLG+V+F
Sbjct: 54 GGRSSLGGYTATVFGATGFLGRYIVNRLARSGCTVIIPFREEMAK-RHLKVAGDLGRVIF 112
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
RN I +++++S++V NLIGR++ TKNF + D +V R+ + +++F+
Sbjct: 113 LEMDLRNTASIEESVRHSDIVYNLIGRDYPTKNFDLEDVHVHGTERIVEAVAKYDIDRFV 172
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
+S+ +A + P S FYRTK QGE+ +PE TI RP+ M+G D+ L
Sbjct: 173 QVSSHSASLDSP-------SDFYRTKAQGEQLARSIYPETTIVRPAPMFGFEDRLLH--- 222
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
R + V + +PV+V DVA A+ +D A + Y+ GP Y ++E+
Sbjct: 223 ---RLAYPSNIVTSNNLQERLRPVHVIDVAMALEHMLQDDTTAAETYELYGPTEYSMAEI 279
Query: 251 LD 252
D
Sbjct: 280 ND 281
>gi|317030711|ref|XP_001393173.2| NADH-ubiquinone oxidoreductase subunit [Aspergillus niger CBS
513.88]
gi|350630138|gb|EHA18511.1| hypothetical protein ASPNIDRAFT_207707 [Aspergillus niger ATCC
1015]
Length = 382
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 134/245 (54%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ NKL QG +++PYR R L++ GDLG+
Sbjct: 45 KVQGGRSSLGGHTATVFGATGFLGRYIVNKLATQGCTVVVPYREEMTK-RHLKVTGDLGR 103
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V F Y RN I +A+++S+VV NL+GR++ TKNF+ D +V+ R+ + V+
Sbjct: 104 VNFIEYDLRNTQSIEEAVRHSDVVYNLVGRQYPTKNFSYTDVHVDGTERIVEAVAKYDVD 163
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NA + P S+++ TK GE+ V +PE TI RP+ M+G D L
Sbjct: 164 RFIHVSSYNASRDSP-------SEYFATKAWGEEIVRNIYPETTIVRPAPMFGFEDNLL- 215
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
H V L E PV+ DV A+ D G+ ++ GPK Y
Sbjct: 216 ---HKLARVTNLLTSNHMQER--YWPVHAIDVGTALERMLHDDSTVGQTFELYGPKNYST 270
Query: 248 SELLD 252
+E+ +
Sbjct: 271 AEIAE 275
>gi|358371340|dbj|GAA87948.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Aspergillus kawachii
IFO 4308]
Length = 382
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 134/245 (54%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ NKL QG +++PYR R L++ GDLG+
Sbjct: 45 KVQGGRSSLGGHTATVFGATGFLGRYIVNKLATQGCTVVVPYREEMTK-RHLKVTGDLGR 103
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V F Y RN I +A+++S+VV NL+GR++ TKNF+ D +V+ R+ + V+
Sbjct: 104 VNFIEYDLRNTQSIEEAVRHSDVVYNLVGRQYPTKNFSYTDVHVDGTERIVEAVAKYDVD 163
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NA + P S+++ TK GE+ V +PE TI RP+ M+G D L
Sbjct: 164 RFIHVSSYNASRDSP-------SEYFATKAWGEEIVRNIYPETTIVRPAPMFGFEDNLL- 215
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
H V L E PV+ DV A+ D G+ ++ GPK Y
Sbjct: 216 ---HKLARVTNLLTSNHMQER--YWPVHAIDVGTALERMLHDDSTVGQTFELYGPKNYST 270
Query: 248 SELLD 252
+E+ +
Sbjct: 271 AEIAE 275
>gi|134077702|emb|CAK45742.1| unnamed protein product [Aspergillus niger]
Length = 372
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 134/245 (54%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ NKL QG +++PYR R L++ GDLG+
Sbjct: 35 KVQGGRSSLGGHTATVFGATGFLGRYIVNKLATQGCTVVVPYREEMTK-RHLKVTGDLGR 93
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V F Y RN I +A+++S+VV NL+GR++ TKNF+ D +V+ R+ + V+
Sbjct: 94 VNFIEYDLRNTQSIEEAVRHSDVVYNLVGRQYPTKNFSYTDVHVDGTERIVEAVAKYDVD 153
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NA + P S+++ TK GE+ V +PE TI RP+ M+G D L
Sbjct: 154 RFIHVSSYNASRDSP-------SEYFATKAWGEEIVRNIYPETTIVRPAPMFGFEDNLL- 205
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
H V L E PV+ DV A+ D G+ ++ GPK Y
Sbjct: 206 ---HKLARVTNLLTSNHMQER--YWPVHAIDVGTALERMLHDDSTVGQTFELYGPKNYST 260
Query: 248 SELLD 252
+E+ +
Sbjct: 261 AEIAE 265
>gi|398389741|ref|XP_003848331.1| hypothetical protein MYCGRDRAFT_50126 [Zymoseptoria tritici IPO323]
gi|339468206|gb|EGP83307.1| hypothetical protein MYCGRDRAFT_50126 [Zymoseptoria tritici IPO323]
Length = 383
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 136/241 (56%), Gaps = 16/241 (6%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGR S G TVFGA+G++G Y+ N+L + G+ I+IPYR R L++ GDLG+V F
Sbjct: 49 GGRHSLGGHTVTVFGATGFVGRYIVNRLAQAGNTIVIPYREEMAK-RHLKVTGDLGRVNF 107
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
Y RN I +++++S++V NL+GR++ TKNF + D +VE R+A + V++FI
Sbjct: 108 IEYDLRNTASIEESVRHSDIVFNLVGRDYPTKNFDLEDVHVEGTHRIATAVAKYDVDRFI 167
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
+S+ + P P S+F+RTK++GE+ FPE TI RPS ++G D+ L
Sbjct: 168 QMSSHSVHPESP-------SEFFRTKWRGEQVAREIFPETTIVRPSPVFGFEDRLLHRLA 220
Query: 191 HMWRHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
R V T + +P++ D+ A+ A D AG+ ++ GPK Y + E
Sbjct: 221 -------RATNVLTSNNMTERFRPIHSVDLGRALEAIAMDDSTAGQTFELYGPKEYSMGE 273
Query: 250 L 250
+
Sbjct: 274 I 274
>gi|426195954|gb|EKV45883.1| NdufA9 NADH ubiquinone oxidoreductase subunit [Agaricus bisporus
var. bisporus H97]
Length = 367
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 140/249 (56%), Gaps = 15/249 (6%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G G S+ +G TVFGA+G++G YL +KLGK G+Q+I+PYR D R + GDLGQ+
Sbjct: 38 GPPGYSAVSGHTVTVFGATGFLGRYLVSKLGKLGTQVIVPYRDE-DDARIFKPMGDLGQI 96
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ + RN+ +I + +++S++V NL+GR++ TKNF D +VE R+A++ GV +
Sbjct: 97 VRMEWDIRNEQQIAECVRHSDIVFNLVGRDYETKNFKFGDVHVEGAERIAKVCAAEGVPR 156
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
F+ +S LNA + S+FY+TK +GE+ V FP AT+ RP MYG D+ L
Sbjct: 157 FVQVSHLNAS-------ATSQSKFYQTKAEGEERVKAAFPTATVMRPGPMYGYEDRLLNN 209
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
W ++ KL ET +PV+V DVA A+ + + +G+ GP
Sbjct: 210 MA-FW-SIWWKL----NQAETRIRPVHVFDVAQALANQVAN-NVSGRTLSLPGPSTLTYE 262
Query: 249 ELLDWFHVV 257
LLD V
Sbjct: 263 YLLDLISSV 271
>gi|346976860|gb|EGY20312.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Verticillium dahliae
VdLs.17]
Length = 375
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 140/245 (57%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG +++P+R R L++ GDLG+
Sbjct: 38 RTQGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVVPFREEMAK-RHLKVTGDLGR 96
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
++F Y RN + I +++++S+VV +L+GR + TKNF++ D ++E R+ + V+
Sbjct: 97 IVFVEYDLRNTESIEQSVRHSDVVYDLVGRNYPTKNFSLEDVHIEGTKRIVDAVAKYDVD 156
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
++IH+S+ +A+ + P S+FYRTK QGE+ +PE TI RP+ ++G D L
Sbjct: 157 RYIHVSSHSANLDSP-------SEFYRTKAQGEQIARSIYPETTIVRPAPLFGFEDNLLL 209
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
V L E PV+ DV A+ D + AG+ ++ GPK Y +
Sbjct: 210 KLA----SVLNLLTANNMRERF--APVHSIDVGHALELMLYDDNTAGQTFELHGPKTYAM 263
Query: 248 SELLD 252
SE+ +
Sbjct: 264 SEIAE 268
>gi|326485233|gb|EGE09243.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Trichophyton equinum
CBS 127.97]
Length = 385
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 140/248 (56%), Gaps = 17/248 (6%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ N+L +QG +I+PYR R L++ GDLG+
Sbjct: 48 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLARQGCTVIVPYREEMTK-RHLKVTGDLGR 106
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S++V NLIGR + TKNF+ D +VE R+ + V+
Sbjct: 107 VVFMEYDLRNTQSIEESVRHSDIVYNLIGRNYPTKNFSYEDIHVEGTERIVESVAKYDVD 166
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+++H+S+ NA + P S+F+RTK QGE FPE TI RP+ M+G D+ L
Sbjct: 167 RYVHVSSYNASLDSP-------SEFFRTKAQGENVARSIFPETTIVRPAPMFGFEDRLLH 219
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL- 246
+ ++F + ++ PV+ DV A+ + + ++ GPK Y
Sbjct: 220 RLAGV-TNIFTSNHMQER-----YWPVHAIDVGRALEIMLVEDWTTAQTFELYGPKNYST 273
Query: 247 --LSELLD 252
+SEL+D
Sbjct: 274 KEISELVD 281
>gi|302408289|ref|XP_003001979.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Verticillium
albo-atrum VaMs.102]
gi|261358900|gb|EEY21328.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Verticillium
albo-atrum VaMs.102]
Length = 375
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 140/245 (57%), Gaps = 14/245 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG +++P+R R L++ GDLG+
Sbjct: 38 RTQGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVVPFREEMAK-RHLKVTGDLGR 96
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
++F Y RN + I +++++S+VV +L+GR + TKNF++ D ++E R+ + V+
Sbjct: 97 IVFVEYDLRNTESIEQSVRHSDVVYDLVGRNYPTKNFSLEDVHIEGTKRIVDAVAKYDVD 156
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
++IH+S+ +A+ + P S+FYRTK QGE+ +PE TI RP+ ++G D L
Sbjct: 157 RYIHVSSHSANLDSP-------SEFYRTKAQGEQIARSIYPETTIVRPAPLFGFEDNLLL 209
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
V L E PV+ DV A+ D + AG+ ++ GPK Y +
Sbjct: 210 KLA----SVLNLLTANNMRERF--APVHSIDVGHALELMLYDDNTAGQTFELHGPKTYAM 263
Query: 248 SELLD 252
SE+ +
Sbjct: 264 SEIAE 268
>gi|222424711|dbj|BAH20309.1| AT2G20360 [Arabidopsis thaliana]
Length = 335
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 150/247 (60%), Gaps = 15/247 (6%)
Query: 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN 77
G+VATVFGA+G++G YL +L K GSQ+++P+RG+ R L+L GDLGQV+ + PR+
Sbjct: 1 GIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQVVPMKFDPRD 60
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM-GVEKFIHISALN 136
+D I+ + +NVVINLIGRE+ T+NF+ DAN I +LA ++KE G+ ++I +S L
Sbjct: 61 EDSIKAVMAKANVVINLIGREYETRNFSFEDANHHIAEKLALVAKEHGGIMRYIQVSCLG 120
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
A +S S+ R K E+ VL PEATI RP+ M G+ D+ L + W
Sbjct: 121 AS-------VSSPSRMLRAKAAAEEAVLNALPEATIMRPATMIGTEDRIL----NPWSMF 169
Query: 197 FRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPKRYLLSELLDW 253
+K G T QPVYV DVAAAIVAA KD ++ GK Y+ GP + EL +
Sbjct: 170 VKKYGFLPLIGGGTTKFQPVYVVDVAAAIVAALKDDGSSMGKTYELGGPDVFTTHELAEI 229
Query: 254 FHVVMKK 260
+ ++++
Sbjct: 230 MYDMIRE 236
>gi|238487382|ref|XP_002374929.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Aspergillus flavus NRRL3357]
gi|317143619|ref|XP_001819584.2| NADH-ubiquinone oxidoreductase subunit [Aspergillus oryzae RIB40]
gi|220699808|gb|EED56147.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Aspergillus flavus NRRL3357]
Length = 381
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 158/297 (53%), Gaps = 24/297 (8%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ N+L QG +++PYR R L++ GDLG+
Sbjct: 44 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLASQGCTVVVPYREEMTK-RHLKVTGDLGR 102
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V F Y RN I +++++S++V NL+GR++ TKNF+ D +V+ R+ + V+
Sbjct: 103 VNFLEYDLRNTQSIEESVRHSDIVYNLVGRQYPTKNFSYTDVHVDGTERIVEAVAKYDVD 162
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
++IH+S+ NA + P S+F+ TK GE+ +PE TI RP+ M+G D L
Sbjct: 163 RYIHVSSYNASRDSP-------SEFFATKAWGEEVARSIYPETTIVRPAPMFGFEDNLL- 214
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
H V L E PV+ DV A+ D AG+ ++ GPK Y
Sbjct: 215 ---HKLAKVTNLLTSNHMQERY--WPVHAPDVGNALERMLHDDSTAGQTFELYGPKEYST 269
Query: 248 SELLDWFHVVMKKGEPDYGYYRYDLRYDPVM-PLKLFINGLFPGYPMGHLTPERVER 303
+E+ + + K + R+ P++ P+ ++N L +P+ ++P+ VER
Sbjct: 270 AEIAELVDREIVK------HRRHINVPKPILKPVAHYLNKLL-WWPI--ISPDEVER 317
>gi|389744576|gb|EIM85758.1| NADH dehydrogenase [Stereum hirsutum FP-91666 SS1]
Length = 379
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 144/249 (57%), Gaps = 15/249 (6%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GRS+ G VATVFG +G++G YL +KL K G+Q+++PYR + R L++ GDLGQ+
Sbjct: 39 GPPGRSATTGHVATVFGCTGFLGRYLVSKLAKAGTQVVVPYRDED-EKRHLKVMGDLGQI 97
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ + R++++I + +++S++V NL GRE+ TK F++ D N R+A ++ GV +
Sbjct: 98 VPLEWDIRSENQIEECLRHSDIVYNLTGREYDTKRFSLHDVNSTGAGRIASVAARAGVPR 157
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
F+H+S LNA + P S+FY+ K +GE+ V FP ATI RP+ MYG D+ L+
Sbjct: 158 FVHVSHLNASRDSP-------SRFYQAKAEGEELVHDAFPNATIIRPATMYGYEDRLLQN 210
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+W ++ KL G I+ PV+V DVA A+ P G + GP +
Sbjct: 211 MA-VW-PIWWKL---NHGRTRIR-PVHVMDVAQALTNLISIPSLPGTL-SLPGPSTLTYA 263
Query: 249 ELLDWFHVV 257
+LD V
Sbjct: 264 YILDLISTV 272
>gi|336363762|gb|EGN92135.1| 39kDa subunit of Ndufa9, NADH ubiquinone oxidoreductase [Serpula
lacrymans var. lacrymans S7.3]
gi|336382839|gb|EGO23989.1| 39kDa subunit of NDUFA9, NADH:ubiquinone oxidoreductase [Serpula
lacrymans var. lacrymans S7.9]
Length = 382
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 167/316 (52%), Gaps = 46/316 (14%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLG-------------------KQGSQIIIPY 49
GT G S+ +G V TVFG +G++G YL ++LG K G+Q+++PY
Sbjct: 38 GTPGYSAVSGHVVTVFGCTGFLGRYLVSQLGELKFSFSRELEMVIFCVTAKMGTQVVVPY 97
Query: 50 RGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADA 109
R + R L+ GDLGQ++ + RN+++I + +++S++V NL+GR++ TKNF +
Sbjct: 98 REE-DEKRHLKPMGDLGQIVPLEWDLRNENQIAECLRHSDIVYNLVGRDYETKNFDYSSV 156
Query: 110 NVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPE 169
+V+ R+A+++ E+GV++ +H+S LNA N SQ+YRTK +GE+ V + FP
Sbjct: 157 HVDGAERIAKIAAEVGVQRLVHVSHLNASSN-------SSSQYYRTKAEGEERVRKVFPS 209
Query: 170 ATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229
ATI RP+ ++G DKFL +W ++ KL GE I+ PV+V DVA A+
Sbjct: 210 ATIVRPASLFGYEDKFLNNMA-IW-PIWWKL---NYGETRIR-PVHVMDVAQALANLMSI 263
Query: 230 PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMP--LKLFINGL 287
P +G + GP LLD V G P PV+P + L I
Sbjct: 264 PQLSGTL-NLPGPNALTFEYLLDLVSSV-TYGPPSRA---------PVVPKRIALLIAKA 312
Query: 288 FPGYPMGHLTPERVER 303
L+P+ VER
Sbjct: 313 AQAAWWPILSPDEVER 328
>gi|402577867|gb|EJW71823.1| hypothetical protein WUBG_17270, partial [Wuchereria bancrofti]
Length = 149
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 105/148 (70%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
GTGGR SF+G V TVFG +G +G L N+L K+G QII+P R Y R LR+ G+LGQV
Sbjct: 1 GTGGRCSFSGNVVTVFGCTGLLGKLLINRLAKEGHQIILPSRQEPYYTRQLRIYGELGQV 60
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
L P+ ++++ IR+AI+YSNVV+NLIG + TKN++ + +VE R+AR++KEMG++K
Sbjct: 61 LLLPFQLKDEESIRQAIRYSNVVVNLIGARYETKNYSFEETHVEGARRIARIAKEMGIQK 120
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTK 156
FIH+SA+NA N P + SQF +K
Sbjct: 121 FIHMSAMNASKNTPPTLFNKPSQFSDSK 148
>gi|451855580|gb|EMD68872.1| hypothetical protein COCSADRAFT_168071 [Cochliobolus sativus
ND90Pr]
Length = 386
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 137/241 (56%), Gaps = 14/241 (5%)
Query: 10 TGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVL 69
+GGRSS G ATVFGA+G++G Y+ N+L + G +I+P+R R L++ GDLG+V+
Sbjct: 51 SGGRSSLGGYTATVFGATGFLGRYIVNRLARSGCTVIVPFREEMAK-RHLKVAGDLGRVI 109
Query: 70 FQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129
F RN I +++++S++V NLIGR++ TKNF + D +V R+A + +++F
Sbjct: 110 FLEMDLRNTQSIEESVRHSDIVYNLIGRDYPTKNFDLEDVHVHGTERIADAVAKYDIDRF 169
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
+H+S+ +A + P S+FYRTK +GE+ +PE TI RP+ M+G D+ L
Sbjct: 170 VHVSSHSARLDSP-------SEFYRTKARGEQVARSIYPETTIVRPAPMFGFEDRLLHRL 222
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
+ +E ++ PV+V DV A+ D A + Y+ GP Y ++E
Sbjct: 223 ASPT-----NIITSNNLQERLR-PVHVIDVGMALERMLHDDTTAAETYELYGPTEYSMAE 276
Query: 250 L 250
+
Sbjct: 277 M 277
>gi|224152461|ref|XP_002337243.1| predicted protein [Populus trichocarpa]
gi|222838542|gb|EEE76907.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 115/168 (68%), Gaps = 8/168 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++KGTGGRSS +G+VATVFGA+G++G Y+ +L K GSQ+++P+RG+ D R L+L GDL
Sbjct: 48 IRKGTGGRSSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSDDDPRHLKLMGDL 107
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y+PR+++ I+ + +NVVINLIGR++ T+N++ + N + +LA +SKE
Sbjct: 108 GQIVPMKYNPRDENSIKAVMAKANVVINLIGRDYETRNYSFEELNHAMAGQLAMISKEHG 167
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATI 172
G+ +FI +S L A + P S+ R K GE+ VLRE PE I
Sbjct: 168 GIMRFIQVSCLGASASSP-------SRLLRAKAAGEEAVLREMPEVNI 208
>gi|322707954|gb|EFY99531.1| NADH-ubiquinone oxidoreductase 40 kDa subunit-like protein
[Metarhizium anisopliae ARSEF 23]
Length = 375
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 135/240 (56%), Gaps = 14/240 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G ATVFGA+G +G Y+ N+L +QG +++P+R R L++ GDLG+V+F
Sbjct: 41 GGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVVPFREEMTK-RHLKVTGDLGRVVF 99
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
Y RN I ++++S+VV NLIGR++ TKNF++ D +VE R+ + V+++I
Sbjct: 100 VEYDLRNTPSIEASVRHSDVVYNLIGRDYPTKNFSLNDVHVEGTERIVEAVAKYDVDRYI 159
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ +AD + S+FY TK +GE+ FPEAT+ RP+ M+G D L
Sbjct: 160 HVSSHSAD-------LQSASEFYSTKARGEQVARSIFPEATLVRPAPMFGFEDNLLLKLA 212
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ L +E PV+ DV AA+ D G+ ++ GP+ Y + ++
Sbjct: 213 SVL-----NLFTANNMQEKF-WPVHSIDVGAALEKMLYDDSTTGQTFELYGPREYSMRQI 266
>gi|452005026|gb|EMD97482.1| hypothetical protein COCHEDRAFT_1084110 [Cochliobolus
heterostrophus C5]
Length = 386
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 137/241 (56%), Gaps = 14/241 (5%)
Query: 10 TGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVL 69
+GGRSS G ATVFGA+G++G Y+ N+L + G +I+P+R R L++ GDLG+V+
Sbjct: 51 SGGRSSLGGYTATVFGATGFLGRYIVNRLARSGCTVIVPFREEMAK-RHLKVAGDLGRVI 109
Query: 70 FQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129
F RN I +++++S++V NLIGR++ TKNF + D +V R+A + +++F
Sbjct: 110 FLEMDLRNTASIEESVRHSDIVYNLIGRDYPTKNFELEDVHVHGTERIADAVAKYDIDRF 169
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
+H+S+ +A + P S+FYRTK +GE+ +PE TI RP+ M+G D+ L
Sbjct: 170 VHVSSHSARLDSP-------SEFYRTKARGEQVARSIYPETTIVRPAPMFGFEDRLLHRL 222
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
+ +E ++ PV+V DV A+ D A + Y+ GP Y ++E
Sbjct: 223 ASPT-----NIITSNNLQERLR-PVHVIDVGMALERMLHDDTTAAETYELYGPTEYSMAE 276
Query: 250 L 250
+
Sbjct: 277 M 277
>gi|409079047|gb|EKM79409.1| 39kDa subunit of NdufA9, NADH ubiquinone oxidoreductase [Agaricus
bisporus var. burnettii JB137-S8]
Length = 367
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 140/249 (56%), Gaps = 15/249 (6%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G G S+ +G TVFGA+G++G YL +KLGK G+Q+I+PYR D R + GDLGQ+
Sbjct: 38 GPPGYSAVSGHTVTVFGATGFLGRYLVSKLGKLGTQVIVPYRDE-DDSRIFKPMGDLGQI 96
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ + R++ +I + +++S++V NL+GR++ TKNF D ++E R+A++ GV +
Sbjct: 97 VRMEWDIRSEQQIAECVRHSDIVFNLVGRDYETKNFKFGDVHIEGAERIAKVCAAEGVPR 156
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
F+ +S LNA + S+FY+TK +GE+ V FP AT+ RP MYG D+ L
Sbjct: 157 FVQVSHLNAS-------ATSQSKFYQTKAEGEERVKAAFPTATVMRPGPMYGYEDRLLNN 209
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
W ++ KL ET +PV+V DVA A+ + + +G+ GP
Sbjct: 210 MA-FW-SIWWKL----NQAETRIRPVHVFDVAQALANQVAN-NVSGRTLSLPGPSTLTYE 262
Query: 249 ELLDWFHVV 257
LLD V
Sbjct: 263 YLLDLISSV 271
>gi|315053839|ref|XP_003176294.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Arthroderma gypseum
CBS 118893]
gi|311338140|gb|EFQ97342.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Arthroderma gypseum
CBS 118893]
Length = 391
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 142/254 (55%), Gaps = 23/254 (9%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLG------KQGSQIIIPYRGNFYDVRDLRL 61
K GGRSS G ATVFGA+G++G Y+ N+LG +QG +I+PYR R L++
Sbjct: 48 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLGMGSPLSRQGCTVIVPYREEMTK-RHLKV 106
Query: 62 CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLS 121
GDLG+V+F Y RN I +++++S++V NLIGR + TKNF+ D +VE R+
Sbjct: 107 TGDLGRVVFMEYDLRNTQSIEESVRHSDIVYNLIGRNYPTKNFSYEDIHVEGTERIVESV 166
Query: 122 KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGS 181
+ V++++H+S+ NA + P S+F+RTK QGE FPE TI RP+ M+G
Sbjct: 167 AKYDVDRYVHVSSYNASLDSP-------SEFFRTKAQGENVARSIFPETTIVRPAPMFGF 219
Query: 182 GDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
D+ L + ++F + ++ PV+ DV A+ ++ + ++ G
Sbjct: 220 EDRLLHRLAGV-TNIFTSNHMQER-----YWPVHAIDVGRALELMLQEEWTTAQTFELYG 273
Query: 242 PKRYL---LSELLD 252
PK Y +SEL+D
Sbjct: 274 PKNYSTKEISELVD 287
>gi|330935009|ref|XP_003304795.1| hypothetical protein PTT_17471 [Pyrenophora teres f. teres 0-1]
gi|311318451|gb|EFQ87114.1| hypothetical protein PTT_17471 [Pyrenophora teres f. teres 0-1]
Length = 440
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 134/241 (55%), Gaps = 14/241 (5%)
Query: 10 TGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVL 69
+GGRSS G ATVFGA+G++G Y+ N+L + G +IIP+R R L++ GDLG+V+
Sbjct: 105 SGGRSSLGGYTATVFGATGFLGRYIVNRLARSGCTVIIPFREEMAK-RHLKVAGDLGRVV 163
Query: 70 FQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129
F RN I +++++S++V NLIGR++ TKNF + D +V R+A + +++F
Sbjct: 164 FMEMDLRNTASIEESVRHSDIVYNLIGRDYPTKNFDLEDVHVAGTERIADAVAKYDIDRF 223
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
+ +S+ +A P S+FYRTK +GE +PE TI RP+ M+G D+FL
Sbjct: 224 VQVSSHSAHPE-------SESEFYRTKARGEIVARSIYPETTIVRPAPMFGFEDRFLH-- 274
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
R + + +PV+V DV A+ D A + Y+ GP Y ++E
Sbjct: 275 ----RLASPSNIITANNLQERSRPVHVIDVGMALERMLHDDTTAAQTYELYGPTEYSMAE 330
Query: 250 L 250
+
Sbjct: 331 V 331
>gi|215717110|dbj|BAG95473.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 311
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 135/221 (61%), Gaps = 11/221 (4%)
Query: 42 GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFAT 101
GSQ+++P+RG+ R L+L GDLGQ++ Y+PR+ D I+ + SNVVINLIGRE+ T
Sbjct: 2 GSQVLVPFRGSEDCHRHLKLMGDLGQIVPMKYNPRDVDSIKAVMAKSNVVINLIGREYET 61
Query: 102 KNFTIADANVEIPARLARLSKEM-GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGE 160
+N+ + N + +LA +SKE G+ +FI +S+L A + P S+ R K GE
Sbjct: 62 RNYGFDEVNHHMAEQLAMISKEHGGIMRFIQVSSLGASASSP-------SRMLRAKAAGE 114
Query: 161 KEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA 220
+ VL+EFPEATI RP+ M G+ D+ L + ++ + L + G I QPVYV DVA
Sbjct: 115 ESVLKEFPEATIMRPATMIGTEDRILNRWAQFAKN-WGFLPLVDSGSTKI-QPVYVVDVA 172
Query: 221 AAIVAACKDPDAA-GKIYQAVGPKRYLLSELLDWFHVVMKK 260
AAIV + KD + GK Y+ GP+ Y + EL + + +++
Sbjct: 173 AAIVNSLKDDGTSMGKTYELGGPEIYTVHELAELMYETIRE 213
>gi|409042496|gb|EKM51980.1| hypothetical protein PHACADRAFT_199484 [Phanerochaete carnosa
HHB-10118-sp]
Length = 363
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 136/226 (60%), Gaps = 14/226 (6%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GRS+ G V TVFG +G++G YL KL K GSQII+PYR + R L+ GDLGQ+
Sbjct: 36 GPPGRSADTGHVVTVFGCTGFLGRYLVAKLAKAGSQIIVPYRDED-EKRHLKPMGDLGQI 94
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ ++ R D+I + +++S+ V NL+GR++ TKNF D +V+ R+A+++ + GV +
Sbjct: 95 VPMEWNLRRADQIEECLRHSDTVYNLVGRDYETKNFKFRDVHVDGAERIAKIAAQAGVPR 154
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FI +S LNA + S FY+++++GE++V +P ATI RP+ MYG D+FL
Sbjct: 155 FIQVSHLNAS-------LDTTSTFYKSRFEGEEKVKAAYPGATIVRPAAMYGYEDRFLNN 207
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG 234
+W ++ KL K T +PV+V DVA A+ + P G
Sbjct: 208 MA-IW-PIWWKLNHMK----TKIRPVHVMDVAQALTNILEVPSLPG 247
>gi|385302183|gb|EIF46327.1| putative mitochondrial complex 40kd subunit [Dekkera bruxellensis
AWRI1499]
Length = 395
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 146/269 (54%), Gaps = 22/269 (8%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+ + G GGRSS G +VFG SG++G + +KL K G+ ++ P+R N +R L++
Sbjct: 33 KTKIAIGXGGRSSRTGYTVSVFGGSGFLGRIITSKLAKHGTLVVAPWR-NSRSMRHLKVN 91
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLG V + + RN I +++ +++VVINL+G E TKNF++ADAN+E R+A +K
Sbjct: 92 GDLGVVNYHEWDLRNVRSIEESVAHADVVINLVGSELNTKNFSMADANIEGSRRIAEAAK 151
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+ GV++FI +S+ NA+P S+F+ TK GE+ V +P+ATI RP+ MYG
Sbjct: 152 KYGVDRFIQVSSYNANPKSE-------SEFFATKGVGEQVVKEIYPDATIVRPAPMYGRN 204
Query: 183 DKFLRYYGHMWR---HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
L + + +V + +Y P + VA A+ D GK Y+
Sbjct: 205 SALLHELVPLTKLGGNVLFRQEIY---------PTHGRQVAEALEKIVFDDSTLGKTYEL 255
Query: 240 VGPKRYLLSELLDWFHVVMKKGEPDYGYY 268
GP+RY EL + + G YGY+
Sbjct: 256 YGPERYSKRELREMIKYMTHIGM--YGYF 282
>gi|326469426|gb|EGD93435.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Trichophyton
tonsurans CBS 112818]
Length = 412
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 138/247 (55%), Gaps = 17/247 (6%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G RSS G ATVFGA+G++G Y+ N+L +QG +I+PYR R L++ GDLG+V
Sbjct: 76 GIVTRSSLGGHTATVFGATGFLGRYIVNRLARQGCTVIVPYREEMTK-RHLKVTGDLGRV 134
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+F Y RN I +++++S++V NLIGR + TKNF+ D +VE R+ + V++
Sbjct: 135 VFMEYDLRNTQSIEESVRHSDIVYNLIGRNYPTKNFSYEDIHVEGTERIVESVAKYDVDR 194
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
++H+S+ NA + P S+F+RTK QGE FPE TI RP+ M+G D+ L
Sbjct: 195 YVHVSSYNASLDSP-------SEFFRTKAQGENVARSIFPETTIVRPAPMFGFEDRLLHR 247
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL-- 246
+ ++F + ++ PV+ DV A+ + + ++ GPK Y
Sbjct: 248 LAGV-TNIFTSNHMQER-----YWPVHAIDVGRALEIMLMEDWTTAQTFELYGPKNYSTK 301
Query: 247 -LSELLD 252
+SEL+D
Sbjct: 302 EISELVD 308
>gi|397614628|gb|EJK62913.1| hypothetical protein THAOC_16455 [Thalassiosira oceanica]
Length = 394
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 162/312 (51%), Gaps = 36/312 (11%)
Query: 7 KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLG 66
+ G GG++S GV VFGA+G++G Y+C+ LG G+ + I RG+ + R LR +LG
Sbjct: 40 ETGRGGKASDAGVKVAVFGATGFLGRYVCSNLGANGTMVYIGNRGDEFSHRHLRTMFELG 99
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNF---------------TIADANV 111
+ F Y R+ + I ++VVINLIG+ + TK +I +ANV
Sbjct: 100 RSKFSFYSSRDTQSMADVIADADVVINLIGKYYDTKALEDTNKFPYLNYKVSTSIHEANV 159
Query: 112 EIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEAT 171
E+PA++A L +M V+ IH+S+ A+P S++ R KY+GE+EVL+ +P AT
Sbjct: 160 EVPAKIAELCTDMQVDNLIHVSSAAANP-------ESSSEWARFKYEGEQEVLKAYPWAT 212
Query: 172 IFRPSDMYGSGDKFLRYYGHMW-RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230
I RP+ ++G D+ L ++ + R F L G + QPV+V DVA AI P
Sbjct: 213 IVRPTQLFGHEDRLLNWFANFADRFPFVPLV---DGGHALTQPVWVDDVARAINRIVDQP 269
Query: 231 DA-AGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFP 289
+ G+ GP+ Y +EL + + + + +P+ D+ P L+ F
Sbjct: 270 EMFEGRRLDCFGPQDYSYAELAKFTNDITGQ-DPNLVDLPSDVMKYPARILQ------FE 322
Query: 290 GYPMGHLTPERV 301
G PM LTP+ V
Sbjct: 323 GNPM--LTPDLV 332
>gi|224010401|ref|XP_002294158.1| nadh-ubiquinone oxidoreductase [Thalassiosira pseudonana CCMP1335]
gi|220970175|gb|EED88513.1| nadh-ubiquinone oxidoreductase [Thalassiosira pseudonana CCMP1335]
Length = 319
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 137/245 (55%), Gaps = 12/245 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGR+S GV VFGA+G++G Y+ + LG G + R + + R LR +LG+
Sbjct: 1 GRGGRASDAGVKVCVFGATGFLGRYVTSGLGTNGVLTYVGSRQDEFAYRHLRPHFELGRA 60
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNF--TIADANVEIPARLARLSKEMGV 126
FQ Y R+ + I +++VINLIG+ + TKN ++ +ANVE+P +A L EM V
Sbjct: 61 KFQFYSSRDKQSMADLIADADIVINLIGKYYDTKNVSTSVHEANVEVPKTIAELCTEMQV 120
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL 186
+ IH+S+ A+P+ S++ RTK++GE+EVL+ +P ATI RP+ M+G DK L
Sbjct: 121 DNLIHVSSAAANPD-------SSSEWARTKFEGEEEVLKAYPWATIVRPTQMFGHEDKLL 173
Query: 187 RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRY 245
++ +M + G + QPV+V DVA I DP+ G+ GP+ Y
Sbjct: 174 NWFANMADRF--PVVPLVDGGHALTQPVWVDDVAKVINRIVDDPEMFEGRRVDCFGPQDY 231
Query: 246 LLSEL 250
+EL
Sbjct: 232 SYAEL 236
>gi|429849743|gb|ELA25090.1| nadh-ubiquinone oxidoreductase 39 kda [Colletotrichum
gloeosporioides Nara gc5]
Length = 618
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 138/246 (56%), Gaps = 14/246 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGR S G ATVFGA+G +G Y+ N+L +QG ++IP+R R L++ GDLG+
Sbjct: 38 RTQGGRHSLGGHTATVFGATGQVGRYIVNRLARQGCTVVIPFREEMAK-RHLKVSGDLGR 96
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y N I +++++S+VV NL+GR + TKNF++ D +VE R+A + V+
Sbjct: 97 VVFIEYDLHNTQSIEESVRHSDVVYNLVGRNYPTKNFSLEDVHVEGTERIAEAVAKYDVD 156
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
++IH+S+ +A + P S+FYRTK +GE+ +PE TI RP+ ++G D L
Sbjct: 157 RYIHMSSHSASLDSP-------SEFYRTKARGEQVARSIYPETTIVRPAPIFGFEDNLLL 209
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ L +E PV+ DV A+ D AG+ ++ GPK Y +
Sbjct: 210 KLASV-----MNLFTANNMQERF-WPVHSIDVGQALELMLYDDSTAGQTFELYGPKNYSM 263
Query: 248 SELLDW 253
+E+ ++
Sbjct: 264 AEIAEY 269
>gi|346326940|gb|EGX96536.1| NAD(P)-binding domain [Cordyceps militaris CM01]
Length = 377
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 140/242 (57%), Gaps = 14/242 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G ATVFGA+G +G Y+ N+L +QG +++PYR R L++ GDLG+V+F
Sbjct: 41 GGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVVPYREEITK-RHLKVTGDLGRVVF 99
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
Y RN I ++++S++V NL+GR++ TKNF++AD +VE R+ + V+++I
Sbjct: 100 IEYDLRNTASIEASVRHSDIVYNLVGRDYPTKNFSLADVHVEGTERIVDAVAKYDVDRYI 159
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ NA + S+F+ TK +GE+ FPE T+ RP+ ++G D L
Sbjct: 160 HVSSHNAS-------TASASEFFATKGRGEEVARGIFPETTLVRPAPIFGFEDNLLLKLA 212
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ ++F + +K PV+ DV A + D AG+ ++ GPK+Y ++++
Sbjct: 213 SVL-NLFTANNMQEKF-----WPVHSIDVGAGLEKMLYDDSTAGQTFELYGPKQYSMAQI 266
Query: 251 LD 252
+
Sbjct: 267 AE 268
>gi|384496455|gb|EIE86946.1| hypothetical protein RO3G_11657 [Rhizopus delemar RA 99-880]
Length = 375
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 136/247 (55%), Gaps = 21/247 (8%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
++ G GGRSS NG +ATVFG +G++G Y+ N+L +QG+Q+++ YR + + R L++ GDL
Sbjct: 42 IRHGLGGRSSTNGHIATVFGCTGFLGRYVVNRLAQQGTQVVVAYR-DPDEARHLKVTGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++ + RN +++ + +++S++V NLIGR++ TK D LA E G
Sbjct: 101 GQIVPLEFDLRNKEQLTECVRHSDIVYNLIGRDYETKQVEEKDGT----RALAEACAENG 156
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V +F+ +SALNA + P S+F RTK GEK PE T+ RP M+G D+F
Sbjct: 157 VARFVQVSALNASEDSP-------SKFLRTKALGEKVAREVIPETTVVRPGIMWGHEDRF 209
Query: 186 LRYY--GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
L G W++ +G I PV DVA A+ GK Y+ GPK
Sbjct: 210 LNRIGDGDGWQYWV------NQGNTKI-LPVSAIDVAQALEVMLTAESTMGKTYELYGPK 262
Query: 244 RYLLSEL 250
Y + ++
Sbjct: 263 EYRVKDI 269
>gi|349806331|gb|AEQ18638.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9
[Hymenochirus curtipes]
Length = 235
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 134/255 (52%), Gaps = 61/255 (23%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GRS+ +G+VATVFG+SG++G Y+ N LGK GSQ+I+P+R + YD++ LR GDL
Sbjct: 41 IPHGRPGRSASSGIVATVFGSSGFLGRYVVNGLGKIGSQVILPHRCDPYDIKHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F ++ +
Sbjct: 101 GQLIFMEWNSK------------------------------------------------- 111
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
+KFIH+S LNAD P+ Y+ R K GE+ V FP+A I +PS++YG D+F
Sbjct: 112 -DKFIHMSHLNADMKSPSKYL-------RNKAVGEEAVREVFPDAIIMKPSEIYGREDRF 163
Query: 186 LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
Y W F + + G++T+KQP YV DVA AIV A +DPD+ GK Y VGP RY
Sbjct: 164 NHYANMRW---FGGVPLIF-GKKTVKQPAYVVDVAKAIVKAIQDPDSNGKTYALVGPNRY 219
Query: 246 LLSELLDWFHVVMKK 260
LL +L+++ V +
Sbjct: 220 LLHDLVEYIFSVAHR 234
>gi|449684022|ref|XP_004210520.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like, partial [Hydra
magnipapillata]
Length = 163
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 107/141 (75%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
LK G GGR+SFNG + TVFGA+G++G Y+ N+L ++G+Q+IIPYRG +VR++RL GDL
Sbjct: 20 LKYGDGGRNSFNGSIVTVFGATGFLGRYVVNRLARRGTQLIIPYRGVDDEVRNIRLMGDL 79
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+ F Y+ R+ + + K + +S+ VINL+G+ F T+NFT++D V A LA+ +KE G
Sbjct: 80 GQIKFFNYNLRDYESLLKTMTHSSTVINLVGKNFDTRNFTMSDCIVTGAADLAKAAKESG 139
Query: 126 VEKFIHISALNADPNPPTYYI 146
V++FIH+SAL A+ + P++Y+
Sbjct: 140 VKRFIHVSALGAEGSSPSHYL 160
>gi|302883650|ref|XP_003040724.1| hypothetical protein NECHADRAFT_67928 [Nectria haematococca mpVI
77-13-4]
gi|256721614|gb|EEU35011.1| hypothetical protein NECHADRAFT_67928 [Nectria haematococca mpVI
77-13-4]
Length = 375
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 140/243 (57%), Gaps = 16/243 (6%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G TVFGA+G +G Y+ N+L +QG ++IPYR R L++ GDLG+V+F
Sbjct: 41 GGRSSLGGHTVTVFGATGQLGRYIVNRLARQGCTVVIPYREEMTK-RHLKVTGDLGRVVF 99
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
+ RN I ++++S+ V NLIGR++ TKNF++ D ++E R+ + V+++I
Sbjct: 100 VEHDLRNTPSIEASVRHSDAVFNLIGRDYPTKNFSLEDVHIEGTERIIEAVAKYDVDRYI 159
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-FPEATIFRPSDMYGSGDKFLRYY 189
H+S+ +A+ S+FYRTK + E E+ RE FPE TI RP+ ++G D L
Sbjct: 160 HVSSHSANSQ-------STSEFYRTKGRAE-EIAREVFPETTIVRPAPIFGFEDNLLLKL 211
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
+ ++F + +K PV+ D+ AA+ D AG+ ++ GPK+Y + E
Sbjct: 212 AGV-TNLFTSNNMQEKF-----YPVHSIDLGAALEKIFYDDTTAGQTFELYGPKQYSMRE 265
Query: 250 LLD 252
+ D
Sbjct: 266 IAD 268
>gi|342885331|gb|EGU85372.1| hypothetical protein FOXB_04083 [Fusarium oxysporum Fo5176]
Length = 678
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 137/240 (57%), Gaps = 14/240 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G TVFGA+G +G Y+ N+L +QG ++IPYR R L++ GDLG+V+F
Sbjct: 41 GGRSSLGGHTVTVFGATGQLGRYIVNRLARQGCTVVIPYREEMSK-RHLKVTGDLGRVVF 99
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
+ RN I ++++S+ V NLIGR++ TKNF++ D +VE R+ + V+++I
Sbjct: 100 IEHDLRNTPSIEASVRHSDAVFNLIGRDYPTKNFSLEDVHVEGTERIVEAVCKYDVDRYI 159
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ +A+ S+FYRTK + E+ + FPE TI RP+ ++G D L
Sbjct: 160 HVSSHSANSQ-------SVSEFYRTKGRAEEVARQLFPETTIVRPAPIFGFEDNLLLKLA 212
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ ++F + +K PV+ DV AA+ D AG+ ++ GPK+Y + E+
Sbjct: 213 GV-TNLFTSNNMQEKF-----YPVHSIDVGAALEKIFYDDTTAGQTFELYGPKKYSMEEI 266
>gi|326507416|dbj|BAK03101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 375
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 137/240 (57%), Gaps = 14/240 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G TVFGA+G +G Y+ N+L +QG ++IPYR R L++ GDLG+V+F
Sbjct: 41 GGRSSLGGHTVTVFGATGQLGRYIVNRLARQGCTVVIPYREEMSK-RHLKVTGDLGRVVF 99
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
+ RN I ++++S+ V NLIGR++ TKNF++ D ++E R+ + V+++I
Sbjct: 100 IEHDLRNTPSIEASVRHSDAVFNLIGRDYPTKNFSLEDVHIEGTERIVEAVCKYDVDRYI 159
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ +A+ S+FYRTK + E+ + FPE TI RP+ ++G D L
Sbjct: 160 HVSSHSANSQ-------SVSEFYRTKGRAEEVARQLFPETTIVRPAPIFGFEDNLLLKLA 212
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ ++F + +K PV+ DV AA+ D AG+ ++ GPK+Y + E+
Sbjct: 213 GV-TNLFTSNNMQEKF-----YPVHSIDVGAALEKIFYDDTTAGQTFELYGPKKYSMEEI 266
>gi|408387851|gb|EKJ67554.1| hypothetical protein FPSE_12262 [Fusarium pseudograminearum CS3096]
Length = 622
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 136/240 (56%), Gaps = 14/240 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G TVFGA+G +G Y+ N+L +QG ++IPYR R L++ GDLG+V+F
Sbjct: 41 GGRSSLGGHTVTVFGATGQLGRYIVNRLARQGCTVVIPYREEMAK-RHLKVTGDLGRVVF 99
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
+ RN I ++++S+ V NLIGR++ TKNF++ D ++E R+ + V+++I
Sbjct: 100 IEHDLRNTPSIEASVRHSDAVFNLIGRDYPTKNFSLEDVHIEGTERIVEAVCKYDVDRYI 159
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ +A+ S+FYRTK + E+ FPE TI RP+ ++G D L
Sbjct: 160 HVSSHSANSQ-------STSEFYRTKGRAEEVARSLFPETTIVRPAPIFGFEDNLLLKLA 212
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ ++F + +K PV+ DV AA+ D AG+ ++ GPK+Y + E+
Sbjct: 213 GV-TNLFTSNNMQEKF-----YPVHSIDVGAALEKIFFDDTTAGQTFELYGPKKYSMEEI 266
>gi|296814772|ref|XP_002847723.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Arthroderma otae CBS
113480]
gi|238840748|gb|EEQ30410.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Arthroderma otae CBS
113480]
Length = 407
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 134/239 (56%), Gaps = 17/239 (7%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR 76
G ATVFGA+G++G Y+ N+L +QG +I+PYR R L++ GDLG+V+F Y R
Sbjct: 79 TGHTATVFGATGFLGRYIVNRLARQGCTVIVPYREEMTK-RHLKVTGDLGRVVFMEYDLR 137
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
N I +++++S++V NLIGR + TKNF+ D +VE R+ + V++++H+S+ N
Sbjct: 138 NTQSIEESVRHSDIVYNLIGRNYPTKNFSYEDIHVEGTERIVESVAKYDVDRYVHVSSYN 197
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
A + P S+F+RTK QGE FPE TI RP+ M+G D+ L + ++
Sbjct: 198 ASLDSP-------SEFFRTKAQGENVARSIFPETTIVRPAPMFGFEDRLLHRLAGV-TNI 249
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL---LSELLD 252
F + ++ PV+ DV A+ + + ++ GPK Y +SEL+D
Sbjct: 250 FTSNHMQER-----YWPVHAIDVGRALELMLMEEWTTAQTFELYGPKNYSTKEISELVD 303
>gi|395324680|gb|EJF57116.1| NADH dehydrogenase [Dichomitus squalens LYAD-421 SS1]
Length = 364
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 133/221 (60%), Gaps = 14/221 (6%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
+ ++ G GRS+ +G ATVFGA+ ++G YL KL K G+ ++IPYR + R LR+
Sbjct: 32 KTTIQYGPPGRSASSGHTATVFGATSFLGRYLVAKLAKVGTHVVIPYRDE-DEKRHLRVT 90
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GDLGQ+ + R D+I + +++S++V NL+GRE+ TKNFT D + + +A ++
Sbjct: 91 GDLGQITSLEWDLRRPDQIEECLRHSDIVYNLVGREYETKNFTYDDVHAKGAEAIASIAY 150
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
+ GV++F+H+S LNA + P S FYR+K +GE+ V +P ATI RP+ M+G
Sbjct: 151 QNGVDRFVHVSHLNASHDSP-------SAFYRSKAKGEELVKEAYPNATIVRPATMFGYE 203
Query: 183 DKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI 223
D+ L +W ++ KL +T +P +V DVA A+
Sbjct: 204 DRLLNNMA-IWP-IWWKL----NHMQTKVRPAHVLDVAQAL 238
>gi|209966457|ref|YP_002299372.1| NADH-ubiquinone oxidoreductase subunit [Rhodospirillum centenum SW]
gi|209959923|gb|ACJ00560.1| NADH-ubiquinone oxidoreductase subunit, putative [Rhodospirillum
centenum SW]
Length = 333
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 136/242 (56%), Gaps = 14/242 (5%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ATVFG SG++G +L +L + G I +P R D LR G +GQ++ P R+D
Sbjct: 7 IATVFGGSGFIGRHLIRRLARTGCVIRVPSR-QPADAAFLRTLGSVGQIVPLPVTIRDDR 65
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADA-NVEIPARLARLSKEMGVEKFIHISALNAD 138
+ AI+ +++VINLIG + + +A E+P R+AR++K+ GV + + +SA+ AD
Sbjct: 66 SLAYAIRGADLVINLIGILAPSGGGSSFEAVQAELPGRIARIAKQEGVARLVQMSAIGAD 125
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P+ Y S +K +GE+ VL FPEATI RPS ++G D F +G M +
Sbjct: 126 AASPSGYAS-------SKAEGERRVLEAFPEATILRPSIVFGPEDGFFNRFGAM--SLVS 176
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
G +T QPVYVGDV A++ A PD+ G+ Y+ GP+ Y EL+ +V+
Sbjct: 177 PFLPLIGGGKTRFQPVYVGDVCDAVMQALATPDSMGRTYELGGPRVYTFKELM---QLVL 233
Query: 259 KK 260
K+
Sbjct: 234 KE 235
>gi|322700667|gb|EFY92421.1| NADH-ubiquinone oxidoreductase 40 kDa subunit-like protein
[Metarhizium acridum CQMa 102]
Length = 393
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 137/258 (53%), Gaps = 32/258 (12%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G ATVFGA+G +G Y+ N+L +QG +++P+R R L++ GDLG+V+F
Sbjct: 41 GGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVVPFREEMTK-RHLKVTGDLGRVVF 99
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATK------------------NFTIADANVE 112
Y RN I ++++S+VV NLIGR++ TK NF++ D +VE
Sbjct: 100 VEYDLRNTPSIEASVRHSDVVYNLIGRDYPTKCVANHQSHVIRIAKPWIRNFSLNDVHVE 159
Query: 113 IPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATI 172
R+ + V+++IH+S+ +A+ + S+FY TK +GE+ R FPEAT+
Sbjct: 160 GTERIVEAVAKYDVDRYIHVSSHSAN-------LQSASEFYATKARGEQVARRIFPEATL 212
Query: 173 FRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA 232
RP+ M+G D L + L +E PV+ DV AA+ D
Sbjct: 213 VRPAPMFGFEDNLLLKLASVL-----NLFTANNMQEKF-WPVHSIDVGAALEKMLYDDST 266
Query: 233 AGKIYQAVGPKRYLLSEL 250
AG+ ++ GPK Y + ++
Sbjct: 267 AGQTFELYGPKEYSMRQI 284
>gi|46127159|ref|XP_388133.1| hypothetical protein FG07957.1 [Gibberella zeae PH-1]
Length = 624
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 135/240 (56%), Gaps = 12/240 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS G TVFGA+G +G Y+ N+L +QG ++IPYR R L++ GDLG+V+F
Sbjct: 41 GGRSSLGGHTVTVFGATGQLGRYIVNRLARQGCTVVIPYREEMAK-RHLKVTGDLGRVVF 99
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
+ RN I ++++S+ V NLIGR++ TKNF++ D +VE R+ + V+++I
Sbjct: 100 IEHDLRNTSSIEASVRHSDAVFNLIGRDYPTKNFSLEDVHVEGTERIVEAVCKYDVDRYI 159
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+S+ +A+ S+FYRTK + E+ FPE TI RP+ ++G D L
Sbjct: 160 HVSSHSANSQ-------STSEFYRTKGRAEEVARSLFPETTIVRPAPIFGFEDNLLLKLA 212
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ ++F + +K Q + D+ AA+ D AG+ ++ GPK+Y + E+
Sbjct: 213 GV-TNLFTSNNMQEKFYPVHPQSI---DIGAALEKIFFDDTTAGQTFELYGPKKYSMEEI 268
>gi|359408025|ref|ZP_09200497.1| putative nucleoside-diphosphate sugar epimerase [SAR116 cluster
alpha proteobacterium HIMB100]
gi|356676782|gb|EHI49131.1| putative nucleoside-diphosphate sugar epimerase [SAR116 cluster
alpha proteobacterium HIMB100]
Length = 315
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 133/239 (55%), Gaps = 10/239 (4%)
Query: 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH 74
+ G T+ G +G++G L KL +++I+ R N + L+ G +GQ+ P +
Sbjct: 3 NLAGKTVTLIGGTGFVGRALAEKLLAADARVIVLAR-NAERAKRLKTGGAIGQLTAVPGN 61
Query: 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
NDD++ I +++VINL+G A T + E+P R+AR++ + + IH SA
Sbjct: 62 ALNDDDLLSVIAPADIVINLVGILAAYGRQTFSALQAELPGRIARMATDTQTDSVIHFSA 121
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L A+ P+ Y RTK +GE+ +LR+FP+AT+ +PS ++G GD F +G M
Sbjct: 122 LGANLKSPSVY-------ARTKAEGERALLRQFPQATVLQPSIIFGPGDGFFNRFGQMA- 173
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ L + G + QPVYVGDVA A++AA +A G+IYQ GP+ Y +EL+ +
Sbjct: 174 MIAPALPLIGGGSG-LMQPVYVGDVAGAVLAALTTEEARGQIYQLGGPQTYSFAELMRF 231
>gi|290994340|ref|XP_002679790.1| predicted protein [Naegleria gruberi]
gi|284093408|gb|EFC47046.1| predicted protein [Naegleria gruberi]
Length = 376
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 127/235 (54%), Gaps = 11/235 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
VATVFG +G++G Y+ L G Q+I P+R N +D+ + R GD+GQV+ + + D
Sbjct: 55 VATVFGCTGFVGRYVVAALADAGYQVITPWRRNEFDIVNQRSMGDVGQVVAMRFDLKRYD 114
Query: 80 EIRKAIKYSNVVINLIGREFAT--KNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
I SNVVIN IGR+ N T+ ++NVE ++R KE V++FI +S LNA
Sbjct: 115 SILDICARSNVVINCIGRDHKRIFDNVTVYNSNVESAEIISRACKETNVDRFIQLSLLNA 174
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D N S++++ K E+ L F TI R ++ YG+ D FL R +F
Sbjct: 175 DKNSE-------SEYWKQKGLAEEAALSNFDNTTIVRSANAYGTEDGFLNLIAKQIR-IF 226
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ + +KG+ + QPV+VGDV A+ + GK + GP+ + S+L+D
Sbjct: 227 PLIPLTQKGQAKV-QPVFVGDVGRAVARTVLNSRTVGKTVELAGPEVFTWSQLVD 280
>gi|118378329|ref|XP_001022340.1| hypothetical protein TTHERM_00557760 [Tetrahymena thermophila]
gi|89304107|gb|EAS02095.1| hypothetical protein TTHERM_00557760 [Tetrahymena thermophila
SB210]
Length = 398
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 133/251 (52%), Gaps = 20/251 (7%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF-YD--VRDLRLCGDLGQ 67
G R S +G+ AT+FGA+G+MG Y+ LG GS +I P+ + YD V++L+LC GQ
Sbjct: 71 GNRQSISGIRATIFGATGFMGPYIGAALGYIGSDVIFPHNHVYAYDDYVKELKLCAGSGQ 130
Query: 68 VLFQPYHPRNDDEI-RKAIKYSNVVINLIGREFATKNFTIAD-ANVEIPARLAR-LSKEM 124
+ +DD + AIK SNVVINL+G KNF A AN+ + ++A ++
Sbjct: 131 SYIMRHFNYDDDNMYDMAIKNSNVVINLVGSRLQNKNFQKAAYANIHVAKKIAEACARNP 190
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
V + IH SA AD P S TK+ GE+ VL FP ATIFRP +YG D
Sbjct: 191 NVRRLIHFSAAGADTKSP-------SPDLHTKFHGEEAVLNAFPNATIFRPCTVYGMQDY 243
Query: 185 FLRYY---GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
F+R++ W H + +QP+ + DVA ++ A K ++AG+IY+ G
Sbjct: 244 FIRHWIKERDWWYH----FNIVTDDCTAKRQPILINDVAQCVLNALKLQESAGQIYELGG 299
Query: 242 PKRYLLSELLD 252
P Y E+ +
Sbjct: 300 PHVYSRLEVFE 310
>gi|170090179|ref|XP_001876312.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649572|gb|EDR13814.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 314
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 132/246 (53%), Gaps = 19/246 (7%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G G S+ G TVFG +G++G YL +KLGK G+Q+++PYR + R L+ GDLGQ+
Sbjct: 7 GPPGYSAVAGRTVTVFGCTGFLGRYLVSKLGKMGTQVVVPYRDE-DEARLLKPMGDLGQI 65
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ + R++ I + +++S+ V NL+GR+F TKNF V R+A+++ E GV +
Sbjct: 66 VRMEWDLRDEKTIAECLRHSDTVFNLVGRDFETKNFDYKSVQVFGAERIAKIAAESGVSR 125
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FI +S LNA N P S+FY K +GE+ V FP ATI RP+ M+G DK L
Sbjct: 126 FIQLSHLNASENSP-------SKFYAAKAEGEQLVKAAFPTATIVRPATMFGYEDKLLTN 178
Query: 189 YG--HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
+W ++ G+ ++ PV+V +VA A+ P + GP
Sbjct: 179 MAVWPIWWNL-------NHGQTRVR-PVHVMEVAQALANLISLPQLP-RTVNLPGPSTLT 229
Query: 247 LSELLD 252
LLD
Sbjct: 230 HEYLLD 235
>gi|340931882|gb|EGS19415.1| NADH dehydrogenase (ubiquinone)-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 368
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 134/242 (55%), Gaps = 24/242 (9%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF 70
GGRSS ATVFGA+G +G Y+ N+L +QG +I+PYR R L++ GDLG+V+F
Sbjct: 43 GGRSSLGEHTATVFGATGQLGRYIVNRLARQGCTVIVPYREEMAK-RHLKVSGDLGRVIF 101
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
I +++++S+VV NLIGR++ TKNF++AD ++E R+ + V++FI
Sbjct: 102 M--------SIEESVRHSDVVYNLIGRDYPTKNFSLADVHIEGTERIVEAVAKYDVDRFI 153
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
+S NA+P+ +F+RTK EK FPE TI RP+ M+G D+ L
Sbjct: 154 QVSTYNANPD-------STCEFFRTKGIAEKVARHVFPETTIVRPAPMFGFEDRLLLKLA 206
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ ++F + +K V +V A+ D AG+ ++ GP++Y ++++
Sbjct: 207 SV-TNLFTSNHMREKFWP-------VNEVGEALERMLYDDSTAGQTFELYGPRQYSMAQI 258
Query: 251 LD 252
+
Sbjct: 259 AE 260
>gi|400592529|gb|EJP60707.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Beauveria bassiana
ARSEF 2860]
Length = 365
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 136/245 (55%), Gaps = 24/245 (9%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG ++IP+R R L++ GDLG+
Sbjct: 38 RTEGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVIPFREEMAK-RHLKVTGDLGR 96
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I ++++S+VV NL GR++ TKNF++AD +VE R+ V+
Sbjct: 97 VVFIEYDLRNIASIEASVRHSDVVYNLTGRDYPTKNFSLADLHVEGTQRIVDAVARYDVD 156
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
++IH+S+ NA+ S+F+ TK +GE+ FPE TI RP+ ++G D L
Sbjct: 157 RYIHVSSHNANSE-------SASEFFATKGRGEEVARSIFPETTIVRPAPIFGFEDSLLL 209
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ ++F + +K PV++ D AG+ ++ GPK+Y +
Sbjct: 210 KLASVL-NLFTANNMREKF-----WPVHM----------LYDDSTAGQTFELYGPKQYSM 253
Query: 248 SELLD 252
+++ +
Sbjct: 254 AQIAE 258
>gi|340505037|gb|EGR31413.1| ndufa9 protein, putative [Ichthyophthirius multifiliis]
Length = 359
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 142/271 (52%), Gaps = 21/271 (7%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD----VRDLRLCGDLG 66
G R S +G+ T+FGA+G++G Y+ LG GS +I P+ + YD V++L+LC G
Sbjct: 32 GNRVSISGLRVTIFGATGFLGPYVGAYLGYIGSDVIFPH-AHVYDYDDYVKELKLCAGTG 90
Query: 67 QVLFQPYHPRNDDEI-RKAIKYSNVVINLIGREFATKNFTIAD-ANVEIPARLAR-LSKE 123
Q + +DD++ AI+ SNVVINL+G K+ A AN+ I ++A ++
Sbjct: 91 QSYLMKHFNFDDDKMYDAAIRNSNVVINLVGSRLQVKDLKQAAYANIHIAKKIAEACARN 150
Query: 124 MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGD 183
V + IH SA ADP P S +TK+ GE+ VL FP AT+ RP+ +YG D
Sbjct: 151 SNVRRLIHFSACGADPKSP-------SPDLQTKFHGEEAVLNIFPNATVMRPTTIYGMQD 203
Query: 184 KFLRYY--GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
F R++ W H F + +QP+ + DV A++ + K ++AG+IY+ G
Sbjct: 204 YFTRHWIKEREWWHHFN---IVTDDCTAKRQPILINDVCQAVMNSLKIQESAGQIYELGG 260
Query: 242 PKRYLLSELLDWFHVVMKKGEPDYGYYRYDL 272
P +Y E+ + + + P Y +DL
Sbjct: 261 PHQYSRLEIYEILANITGR-PPKLAYLSHDL 290
>gi|320582132|gb|EFW96350.1| putative mitochondrial Complex I, subunit [Ogataea parapolymorpha
DL-1]
Length = 387
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 132/266 (49%), Gaps = 26/266 (9%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+G+GGRSS G ATVFG +G++G L KL K G+ ++ P+R N R L+ GDLG
Sbjct: 30 QGSGGRSSRTGFTATVFGGTGFLGRLLVAKLAKHGTILVCPFR-NEMAKRQLKPMGDLGV 88
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V + RN + +++ S++V NLIG + TKNF++ DANVE R+A L V
Sbjct: 89 VNYIECDIRNLRSLEESVCRSDIVFNLIGSDQNTKNFSMEDANVESIRRIAELCTAYEVP 148
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+ +H+S+ NADPN SQF+ TK Q E FP+ TI RP +YG FL
Sbjct: 149 RLVHVSSYNADPN-------SKSQFFATKGQSEIAAREAFPDVTIVRPGPLYGRNSTFL- 200
Query: 188 YYGHMWRHVFRKLAVYKKGEETIK-----QPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
L + E IK P + VA A+ D GK+Y+ G
Sbjct: 201 ----------NDLLPLQGFGENIKYRSTVYPAHGLQVAGALEKIGFDDSTTGKVYELHGN 250
Query: 243 KRYLLSELLDWFHVVMKKGEPDYGYY 268
+ Y +EL + + G YGY+
Sbjct: 251 EPYSRAELREMLKYIRHLGM--YGYF 274
>gi|339319747|ref|YP_004679442.1| NADH dehydrogenase subunit I [Candidatus Midichloria mitochondrii
IricVA]
gi|338225872|gb|AEI88756.1| NADH dehydrogenase subunit I [Candidatus Midichloria mitochondrii
IricVA]
Length = 305
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 129/243 (53%), Gaps = 16/243 (6%)
Query: 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE 80
+FG SG++G Y+ +L K ++II+ R + +DL L +GQV FQ P E
Sbjct: 9 VVIFGGSGFVGRYVIRRLAKTNAKIIVVGRSASFR-QDLSLMCSVGQVSFQKV-PNLKME 66
Query: 81 IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
++ + S VINLIG F TK T ++E+ ++A ++ V + +HISAL +
Sbjct: 67 WQELLAGSTHVINLIGILFQTKKETFQSVHIELAEKIAHFARLNNVSRLVHISALTCKTS 126
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH-VFRK 199
Y +S K GE VL EFPEA I RPS ++GS D+FL + + R+ F
Sbjct: 127 KSDYSMS--------KISGESAVLNEFPEAVILRPSVIFGSEDRFLNLFARIIRYSFFVP 178
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA--AGKIYQAVGPKRYLLSELLDWFHVV 257
+ V K T QP+YV DVAA+I C PD+ AGKI++ G K+Y L +L +
Sbjct: 179 MVVLGK---TKFQPIYVDDVAASIEKCCNLPDSQVAGKIFEIGGKKQYSLKQLFKLIASL 235
Query: 258 MKK 260
+ K
Sbjct: 236 INK 238
>gi|327308948|ref|XP_003239165.1| NADH-ubiquinone oxidoreductase subunit [Trichophyton rubrum CBS
118892]
gi|326459421|gb|EGD84874.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Trichophyton rubrum
CBS 118892]
Length = 376
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 133/248 (53%), Gaps = 26/248 (10%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
K GGRSS G ATVFGA+G++G Y+ N+L +QG +I+PYR R L++ GDLG+
Sbjct: 48 KVQGGRSSLGGHTATVFGATGFLGRYIVNRLARQGCTVIVPYREEMTK-RHLKVTGDLGR 106
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+F Y RN I +++++S++V NLIGR + TKNF+ D +VE R+ + V+
Sbjct: 107 VVFMEYDLRNTQSIEESVRHSDIVYNLIGRNYPTKNFSYEDIHVEGTERIVESVAKYDVD 166
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+++H+S+ NA P R K + ++ F E TI RP+ M+G D+ L
Sbjct: 167 RYVHVSSYNARP--------------RLKVKTLQDPF--FSETTIVRPAPMFGFEDRLLH 210
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL- 246
+ ++F + ++ PV+ DV A+ + + ++ GPK Y
Sbjct: 211 RLAGV-TNIFTSNHMQER-----YWPVHAIDVGRALEIMLMEEWTTAQTFELYGPKNYST 264
Query: 247 --LSELLD 252
+SEL+D
Sbjct: 265 KEISELVD 272
>gi|145521871|ref|XP_001446785.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414274|emb|CAK79388.1| unnamed protein product [Paramecium tetraurelia]
Length = 350
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 137/257 (53%), Gaps = 14/257 (5%)
Query: 10 TGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG--NFYD-VRDLRLCGDLG 66
G + + +G+ AT+ G + + G Y+ LG GS++I P+ N+ D VR+L+ G
Sbjct: 22 NGSKHTPSGIRATIHGGTSFSGIYMGGMLGNIGSELIFPHNHQYNYEDHVRELKTTSGPG 81
Query: 67 Q-VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIAD-ANVEIPARLAR-LSKE 123
Q L + N + I +K SNVV+NL+G KN + N+ +P R+A +K
Sbjct: 82 QNWLLHDMNYDNKEMIEWTMKNSNVVVNLLGPRKHLKNRKDFEWINITVPKRIAEACAKN 141
Query: 124 MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGD 183
GV + IH SA A+P+ + + +TKY GE+EVL FP ATIFRPS M G D
Sbjct: 142 PGVIRLIHFSACGANPHAQSLDL-------QTKYIGEQEVLNAFPNATIFRPSVMVGDND 194
Query: 184 KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
F Y+ + + F + + +QP++V DVA A++ A K P+ G+ Y+ GP
Sbjct: 195 DF-AYHWQVQKRYFHNFNIVPDNCQAKRQPIFVQDVAQAMLNALKMPETIGQTYELGGPH 253
Query: 244 RYLLSELLDWFHVVMKK 260
Y L E + FH ++++
Sbjct: 254 VYTLLECYEMFHNIVQR 270
>gi|145522776|ref|XP_001447232.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414732|emb|CAK79835.1| unnamed protein product [Paramecium tetraurelia]
Length = 350
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 137/256 (53%), Gaps = 14/256 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG--NFYD-VRDLRLCGDLGQ 67
G + + +G+ AT+ G + + G Y+ LG GS++I P+ N+ D VR+L+ GQ
Sbjct: 23 GAKHTPSGIRATIHGGTSFSGIYMGGMLGNIGSELIFPHNHQYNYEDHVRELKTTSGPGQ 82
Query: 68 -VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIAD-ANVEIPARLAR-LSKEM 124
L + N + I +K SNVV+NL+G KN + N+ +P R+A +K
Sbjct: 83 NWLLHDMNYDNKEMIEWTMKNSNVVVNLLGPRKHLKNRKDFEWINITVPKRIAEACAKNP 142
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
GV + IH SA A+P+ + + +TKY GE+EVL FP ATIFRPS M G D
Sbjct: 143 GVIRLIHFSACGANPHAESLDL-------QTKYIGEQEVLNAFPNATIFRPSVMVGDNDD 195
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
F Y+ + + F + + +QP++V DVA A++ A K P+ G+ Y+ GP
Sbjct: 196 F-AYHWQVQKRYFHNFNIVPDNCQAKRQPIFVQDVAQAMLNALKMPETIGQTYELGGPHV 254
Query: 245 YLLSELLDWFHVVMKK 260
Y L E + FH ++++
Sbjct: 255 YTLLECYEMFHNIVQR 270
>gi|168009832|ref|XP_001757609.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691303|gb|EDQ77666.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 146/250 (58%), Gaps = 26/250 (10%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+K+GTGGRSS +GVVATVFGA+G++G Y+ +L + GSQ++ G L
Sbjct: 60 VKRGTGGRSSVSGVVATVFGATGFLGRYVIQQLARMGSQVMA-----------FEAHGRL 108
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM- 124
GQ++ Y R++ I+ I SNV++N IG+E+ T+NF+ D N I R+++L++E
Sbjct: 109 GQIVPIKYDARDEGSIKPVIANSNVIVNCIGKEYETRNFSFEDVNHGISNRISKLAREHG 168
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
G+ K++ +S L A P+ P S+ R+K+ E+ V + FPEATI R M G D+
Sbjct: 169 GILKYVQMSCLAAAPDSP-------SRLLRSKHAAEEVVKQNFPEATILRTGPMVGVEDR 221
Query: 185 FLRYYGHMWRHVFRKLAVYK-KGEETIK-QPVYVGDVAAAIVAACKDPD-AAGKIYQAVG 241
L + W +KL V G+ K QPV V DVAAA++AA +D + GK ++ G
Sbjct: 222 LL----NRWAIQAKKLPVVPIPGDGLTKMQPVLVVDVAAAVIAAIRDEGFSMGKTFELGG 277
Query: 242 PKRYLLSELL 251
P + +++L+
Sbjct: 278 PDVFTVNDLV 287
>gi|323456187|gb|EGB12054.1| hypothetical protein AURANDRAFT_20714 [Aureococcus anophagefferens]
Length = 394
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 139/268 (51%), Gaps = 24/268 (8%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGR S +GV +FG G++G Y+C+++GK G+++ + RG + R L++ D GQ
Sbjct: 50 GLGGRHSVSGVRCALFGGIGFLGRYVCSEMGKIGTRVRVGNRGCELEARHLKVSFDHGQF 109
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATK---------------NFTIADANVEI 113
Y R++ I + I +NVV+N++G+ + T+ N++ + NV+
Sbjct: 110 HAPFYSARDEASIAEVIGRANVVVNMVGKYYETRNVVPTKRADGAYSNVNYSYEEVNVDA 169
Query: 114 PARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIF 173
+AR +K G F+H+SA+ AD P S++ RTK GE VL EFPEATI
Sbjct: 170 ARAIARQAKAAGAAGFVHVSAMAADAKSP-------SEWARTKAAGEAAVLEEFPEATIV 222
Query: 174 RPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA- 232
RP ++G D+ L ++ + + + G ++ QPVY DVA I DP
Sbjct: 223 RPCTLFGWEDRLLNWFAGIAGMPGALVPLVDDG-ASVLQPVYAVDVAKVINQITLDPTKY 281
Query: 233 AGKIYQAVGPKRYLLSELLDWFHVVMKK 260
AG++ + GP Y EL ++ V K+
Sbjct: 282 AGQVVELGGPAEYTRRELAEFTFDVTKQ 309
>gi|254470804|ref|ZP_05084207.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
[Pseudovibrio sp. JE062]
gi|211959946|gb|EEA95143.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
[Pseudovibrio sp. JE062]
Length = 328
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 127/247 (51%), Gaps = 11/247 (4%)
Query: 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH 74
+ NG + TVFG SG++G ++ L ++G I R L+ G +GQ++
Sbjct: 6 ALNGKLITVFGGSGFIGRHVIRILAERGYSIRAAVRRPEL-AEHLQPLGAVGQIMPVAAS 64
Query: 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
RN + +A++ + VINL+G + T + P +A + KE G++ F+H+SA
Sbjct: 65 VRNKKSVERAVEGACAVINLVGILYETGAQKFDSVQAKGPGVVAEVCKEQGIDTFVHVSA 124
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ AD N P Y +TK GEK VL P A IFRPS ++G D F +G M +
Sbjct: 125 IGADENSPAVY-------AKTKAAGEKAVLEAMPNAVIFRPSIVFGPEDDFFNRFGSMAQ 177
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD-W 253
+F L + G T QPVYVGDVA AI A ++ GKIY+ GP+ E L
Sbjct: 178 -LFPALPLIGGG-HTKFQPVYVGDVALAIANAAENKVETGKIYELGGPQVATFKECLQLM 235
Query: 254 FHVVMKK 260
+V+++K
Sbjct: 236 MNVILRK 242
>gi|313220631|emb|CBY31477.1| unnamed protein product [Oikopleura dioica]
gi|313235218|emb|CBY10783.1| unnamed protein product [Oikopleura dioica]
Length = 458
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR--DLRLCG 63
+ G GGRSSF+G ATVFGA+G +G L N LG+ GS I++P+R + R DLRL G
Sbjct: 25 IAAGAGGRSSFSGQAATVFGATGQVGHTLVNNLGRMGSSIVLPHRNSTEAWRSNDLRLMG 84
Query: 64 DLGQVLFQPYHP---RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARL 120
DLG + F + R+D E+ + I++SNVV N+IG KN+T + NV+ P RLA+L
Sbjct: 85 DLGTLQFYQHFDVAHRSDREVMETIEHSNVVYNVIGTRRELKNYTRRETNVDWPERLAKL 144
Query: 121 SKEMGV-EKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMY 179
G + +H+ LN Y S+ + +++ P+A I + +D+
Sbjct: 145 VAAKGDGTRLVHLVPLNTGNEEYCKY----SKILEEHTEACEKIRDALPDAIIVKSADVV 200
Query: 180 GSGDKFLRYYGHMWRHVFRKLA-------VYKKGEETIKQPVYVGDVAAAIVAACKDPDA 232
G D + ++ + R L+ +Y G +T P+ D+ A+ PD+
Sbjct: 201 GWNDSYCNFWSMNNEYYQRSLSYIGAFPLMYGGGAQTYVSPIVRRDLGRALAKIGAHPDS 260
Query: 233 AGKIYQAVGPKRYLLSELLDWFHVV 257
G ++ G K + L EL+++ + V
Sbjct: 261 DGHDFELFGNKVFKLVELVEFMYDV 285
>gi|225683993|gb|EEH22277.1| 40 kD subunit of NADH dehydrogenase [Paracoccidioides brasiliensis
Pb03]
Length = 362
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 122/215 (56%), Gaps = 14/215 (6%)
Query: 38 LGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR 97
+ +QG +++PYR R L++ GDLG+V+F Y RN I +++++S+VV NL+GR
Sbjct: 55 IARQGCTVVVPYREEMAK-RHLKVTGDLGRVVFMEYDLRNTQSIEESVRHSDVVYNLVGR 113
Query: 98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157
++ TKNF+ D +++ R+A + + V++FIH+S+ NADPN P S+F+RTK
Sbjct: 114 KYPTKNFSYEDVHIDGLERIAEATAKYDVDRFIHVSSYNADPNSP-------SEFFRTKA 166
Query: 158 QGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVG 217
+GE+ FPE TI RP+ M+G D L + ++F + ++ PV+V
Sbjct: 167 RGEQLARSIFPETTIVRPAPMFGFEDNLLHKLASI-TNLFTSNHMRER-----YWPVHVI 220
Query: 218 DVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
DV A+ + + Y+ GPK Y +E+ +
Sbjct: 221 DVGHALEKMMFTDASVAQTYELYGPKNYSTAEIAE 255
>gi|145490959|ref|XP_001431479.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398584|emb|CAK64081.1| unnamed protein product [Paramecium tetraurelia]
Length = 351
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 134/257 (52%), Gaps = 15/257 (5%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG--NFYD-VRDLRLCGDLGQ 67
G + + +G+ AT+ G + + G Y+ LG GS++I P+ N+ D VR+L+ GQ
Sbjct: 23 GAKHTPSGIRATIHGGTSFSGIYMGGMLGNIGSELIFPHNHQYNYEDHVRELKTTSGPGQ 82
Query: 68 -VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFAT---KNFTIADANVEIPARLARLSKE 123
L + N + I +K SNVV+NL+G + + K F + + +L K
Sbjct: 83 NWLLHDMNYDNKEMIEWTMKNSNVVVNLLGPQKTSEKQKGFRVDQLSQCQKEQLKHALKT 142
Query: 124 MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGD 183
GV + IH SA A+P+ + + +TKY GE+EVL FP ATIFRPS M G D
Sbjct: 143 PGVIRLIHFSACGANPHAESLDL-------QTKYIGEQEVLNAFPNATIFRPSVMVGDND 195
Query: 184 KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
F Y+ + + F + + +QP++V DVA A++ A K P+ G+ Y+ GP
Sbjct: 196 DF-AYHWQVQKRYFHNFNIVPDNCQAKRQPIFVQDVAQAMLNALKMPETIGQTYELGGPH 254
Query: 244 RYLLSELLDWFHVVMKK 260
Y L E + FH ++++
Sbjct: 255 VYTLLECYEMFHNIVQR 271
>gi|374329046|ref|YP_005079230.1| NADH dehydrogenase (ubiquinone) [Pseudovibrio sp. FO-BEG1]
gi|359341834|gb|AEV35208.1| NADH dehydrogenase (ubiquinone) [Pseudovibrio sp. FO-BEG1]
Length = 328
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 126/247 (51%), Gaps = 11/247 (4%)
Query: 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH 74
+ NG + TVFG SG++G ++ L ++G I R L+ G +GQ++
Sbjct: 6 ALNGKLITVFGGSGFIGRHVIRILAERGYSIRAAVRRPEL-AEHLQPLGAVGQIMPVAAS 64
Query: 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
RN + +A++ + VINL+G + T + P +A + KE G++ F+H+SA
Sbjct: 65 VRNKKSVERAVEGACAVINLVGILYETGTQKFDSVQAKGPGVVAEVCKEKGIDTFVHVSA 124
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ AD N P Y +TK GEK VL P A IFRPS ++G D F +G M
Sbjct: 125 IGADANSPAVY-------AKTKAAGEKAVLDAMPNAVIFRPSIVFGPEDDFFNRFGSMA- 176
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD-W 253
+F L + G T QPVYVGDVA AI A ++ GKIY+ GP+ E L
Sbjct: 177 QLFPALPLIGGG-HTKFQPVYVGDVALAIANAAENKVETGKIYELGGPQVATFKECLQLM 235
Query: 254 FHVVMKK 260
+V++++
Sbjct: 236 MNVILRR 242
>gi|221107851|ref|XP_002155644.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like, partial [Hydra
magnipapillata]
Length = 144
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 100/151 (66%), Gaps = 7/151 (4%)
Query: 40 KQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREF 99
++G+Q+IIPYRG +VR++RL GDLGQ+ F Y+ R+ + + K + +S+ VINL+G+ F
Sbjct: 1 RRGTQLIIPYRGVDDEVRNIRLMGDLGQIKFFNYNLRDYESLLKTMTHSSTVINLVGKNF 60
Query: 100 ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG 159
T+NFT++D V A LA+ +KE GV++FIH+SAL A+ + P++Y+ R K +
Sbjct: 61 DTRNFTMSDCIVTGAADLAKAAKESGVKRFIHVSALGAEGSSPSHYL-------RLKSRS 113
Query: 160 EKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
E+ V FP ATI RP+ MYG D + Y
Sbjct: 114 ERCVSDAFPGATIMRPAPMYGDEDSYFNRYA 144
>gi|402580912|gb|EJW74861.1| hypothetical protein WUBG_14231, partial [Wuchereria bancrofti]
Length = 229
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Query: 116 RLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRP 175
R+AR++KEMG++KFIH+SA+NA N P + SQF RTK GE+ V EFP ATI RP
Sbjct: 3 RIARIAKEMGIQKFIHMSAMNASKNTPPTLFNKPSQFLRTKGLGEEVVREEFPSATIIRP 62
Query: 176 SDMYGSG-DKFLRYYGHMWRHVFRKLA-VYKKGEETIKQPVYVGDVAAAIVAACKDPDAA 233
MYG D F+ Y+ + R +R + VYKKGE T K P++VGDV+ + DP +
Sbjct: 63 GMMYGGNYDAFINYFLAVQRIPYRSVIYVYKKGEHTYKMPIWVGDVSKGVERTIVDPHSI 122
Query: 234 GKIYQAVGPKRYLLSELLDWFH 255
GK Y+ VGP Y LSEL+D+ +
Sbjct: 123 GKTYEFVGPHCYKLSELIDYMY 144
>gi|114798702|ref|YP_758824.1| putative NADH-quinone oxidoreductase [Hyphomonas neptunium ATCC
15444]
gi|114738876|gb|ABI77001.1| putative NADH-quinone oxidoreductase [Hyphomonas neptunium ATCC
15444]
Length = 329
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 126/233 (54%), Gaps = 10/233 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+ G SG++G Y L ++G ++ + R ++ D+RL G G V + R+
Sbjct: 5 LVTLVGGSGFIGRYAARALVEKGWRVRVACR-RVHNAIDVRLAGPPGWVDVVQANIRDRA 63
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +A+ ++ V+NL+G F T A + A LA +++E G+++F+ ISA+ ADP
Sbjct: 64 SLERAVDGADAVVNLVGILFEHARQTFEGAQTDGAALLAEVAREKGIKRFVQISAIGADP 123
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S + RTK E+ V FP A I RPS ++G D+F + +M R V
Sbjct: 124 D-------SRSPYGRTKAAAEEAVRERFPSAVILRPSIVFGPEDQFFNRFANMARFVPFM 176
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
A+ G +T QPVY GDVAAAI A + DAAG+ ++ GP+ Y +EL D
Sbjct: 177 PAI--GGGKTKFQPVYAGDVAAAIAGAVEREDAAGRTFELGGPRSYSFNELYD 227
>gi|374293238|ref|YP_005040273.1| putative NAD-dependent epimerase/dehydratase [Azospirillum
lipoferum 4B]
gi|357425177|emb|CBS88060.1| putative NAD-dependent epimerase/dehydratase [Azospirillum
lipoferum 4B]
Length = 323
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 136/249 (54%), Gaps = 10/249 (4%)
Query: 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH 74
S+ V TVFG SG++G +L +L + G+QI I R N L+ G +GQ++
Sbjct: 2 SYRTQVITVFGGSGFIGRHLIRRLARSGAQIRIATR-NPGKATFLKTAGAVGQIVPFATD 60
Query: 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
D+ + +A++ +++VINL+G + + + +V+ AR+ARL+ GV + I ISA
Sbjct: 61 CTKDESVARAVQGADIVINLLGVLYERGSQSFQGVHVDAAARIARLAAANGVNRLIQISA 120
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ AD N P+ Y R+K GE+ VL FP ATI RPS ++G D F + M +
Sbjct: 121 IGADANSPSSY-------ARSKAAGEQAVLSAFPAATILRPSIVFGPEDNFFNKFAAMAQ 173
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ G +T QPVYVG++A A+VAA + D+ GK Y+ GP+ Y ELL+
Sbjct: 174 KAPALPLI--GGGKTRFQPVYVGNLADAVVAALESDDSRGKTYELGGPRVYSFRELLELT 231
Query: 255 HVVMKKGEP 263
+++ P
Sbjct: 232 QKDIQRHRP 240
>gi|407767937|ref|ZP_11115316.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407288650|gb|EKF14127.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 335
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 133/259 (51%), Gaps = 25/259 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG +G++G ++ +L ++ + +P R +F V+ L+ G LGQV+ RN++
Sbjct: 5 IVTVFGGTGFVGRHIVKRLLERDFIVRVPTR-SFERVKKLKPMGYLGQVVPVHCDVRNEE 63
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
++ AI+ S VINL+G + + + + +V+ R+A +K GV+ F+H+SAL D
Sbjct: 64 TLKSAIEGSEAVINLLGILYQRGSSSFMNIHVKAAKRIAEEAKACGVKTFLHMSALGVDK 123
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
NP Y + +K GEK V FP+A IFRPS ++G DKFL + M R+
Sbjct: 124 NPHALYAT-------SKLAGEKAVRAAFPDAVIFRPSVIFGPEDKFLNQFATMARYSSVL 176
Query: 200 LAVYKKGEETIK----------------QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
+ G ++ QPVYV DVA A V A + +AGK Y+ GP+
Sbjct: 177 PVIGAPGLPKVELDKGKVDMLGDGGPKFQPVYVADVAEAFVTALVEGKSAGKTYELGGPE 236
Query: 244 RYLLSELL-DWFHVVMKKG 261
Y LL D + ++
Sbjct: 237 VYSFMGLLRDMLQITRQRA 255
>gi|389690602|ref|ZP_10179495.1| putative nucleoside-diphosphate sugar epimerase [Microvirga sp.
WSM3557]
gi|388588845|gb|EIM29134.1| putative nucleoside-diphosphate sugar epimerase [Microvirga sp.
WSM3557]
Length = 368
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 133/250 (53%), Gaps = 30/250 (12%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP-- 75
TVFG SG++G Y+ ++L ++G ++++P R NF + G +GQ+ P H
Sbjct: 14 TVFGGSGFLGRYVVSRLAERGYRVLVPTRQPNLANFLPL------GKVGQI--NPIHANL 65
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
RN+D + A+ ++ V+NL+G +E + F A PA +ARL+ + F H+S
Sbjct: 66 RNEDSVAHAVARADHVVNLVGILQETGRQRFDALQAKA--PAMIARLAGK--AVSFTHVS 121
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ AD N + Y R+K +GE +L+E P+A I RPS M+G GD +G +
Sbjct: 122 AIGADANSESAY-------ARSKAEGEAALLQERPDAVILRPSLMFGPGDSSFNRFGSLA 174
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
R + V G ET QPVY GDVA A+V A G++Y+ GP+ + +++++
Sbjct: 175 RML---PVVPLPGAETRFQPVYAGDVAEAVVRAVDGAVPGGRVYELGGPEIRTMRQMMEF 231
Query: 254 FHVVMKKGEP 263
V ++ P
Sbjct: 232 VLQVTERNRP 241
>gi|218528786|ref|YP_002419602.1| NADH dehydrogenase (ubiquinone) [Methylobacterium extorquens CM4]
gi|218521089|gb|ACK81674.1| NADH dehydrogenase (ubiquinone) [Methylobacterium extorquens CM4]
Length = 389
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 133/248 (53%), Gaps = 25/248 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL----CGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R DL L G +GQ++ +
Sbjct: 18 LVTVFGGSGFLGRHVVRALAKRGYRIRVAVRRP-----DLALFLQPLGKVGQIVGVQANL 72
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
R D IR+A+++S++VINL+G +E ++ F+ E +AR + +G K +H+S
Sbjct: 73 RYPDSIRRAVEHSDIVINLVGILQESGSQRFS--KLQTEGAGEIARAATAVGA-KLVHVS 129
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
AL ADP+ P+ Y R+K GE EVLR P+A IFRPS ++G GD F + +
Sbjct: 130 ALGADPDSPSLY-------ARSKALGEAEVLRASPDAVIFRPSLVFGPGDGFFNRFASLA 182
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ A+ G +T QPV+VGDVA AI A G++Y+ GP+ L + +
Sbjct: 183 TFL---PALPLAGAQTRFQPVFVGDVAEAIARAVDGLAPGGRVYELGGPEVNTLEYFVRY 239
Query: 254 -FHVVMKK 260
V M++
Sbjct: 240 MLEVTMRR 247
>gi|254559973|ref|YP_003067068.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Methylobacterium extorquens DM4]
gi|254267251|emb|CAX23083.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Methylobacterium extorquens DM4]
Length = 389
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 133/248 (53%), Gaps = 25/248 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL----CGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R DL L G +GQ++ +
Sbjct: 18 LVTVFGGSGFLGRHVVRALAKRGYRIRVAVRRP-----DLALFLQPLGKVGQIVGVQANL 72
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
R D IR+A+++S++VINL+G +E ++ F+ E +AR + +G + +H+S
Sbjct: 73 RYPDSIRRAVEHSDIVINLVGILQESGSQRFS--KLQTEGAGEIARAATAVGA-RLVHVS 129
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
AL ADP+ P+ Y R+K GE EVLR P+A IFRPS ++G GD F + +
Sbjct: 130 ALGADPDSPSLY-------ARSKALGEAEVLRASPDAVIFRPSLVFGPGDGFFNRFASLA 182
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ A+ G +T QPV+VGDVA AI A G++Y+ GP+ L + +
Sbjct: 183 TFL---PALPLAGAQTRFQPVFVGDVAEAIARAVDGLAPGGRVYELGGPEVNTLEYFVRY 239
Query: 254 -FHVVMKK 260
V M++
Sbjct: 240 MLEVTMRR 247
>gi|407772836|ref|ZP_11120138.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Thalassospira
profundimaris WP0211]
gi|407284789|gb|EKF10305.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Thalassospira
profundimaris WP0211]
Length = 335
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 128/250 (51%), Gaps = 28/250 (11%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG +G++G ++ +L ++ + +P R +F V+ L+ G+LGQV+ R++D
Sbjct: 5 IVTVFGGTGFVGRHIVKRLLERDFIVRVPTR-SFERVKKLKPMGNLGQVVPVHCDVRDED 63
Query: 80 EIRKAIKYSNVVINLIGR--EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
I+ A++ S VINL+G E +KNF + +V+ R+A +K GV+ +H+SAL
Sbjct: 64 SIKGALEGSEAVINLLGILYERGSKNFL--NIHVKAAKRIAEEAKAAGVKTLLHMSALGV 121
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D N Y + +K GEK V FP+A IFRPS ++G D FL + M R
Sbjct: 122 DKNTSANYAT-------SKLAGEKAVREAFPDAVIFRPSVIFGPNDNFLNKFATMARFSP 174
Query: 198 RKLAVYKKGEETIK----------------QPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
V G + QPVYVGDVA A V A + +AGK Y+ G
Sbjct: 175 MLPVVGAPGLPKVDLGEGKVDLHGEGGPKFQPVYVGDVADAFVTALMEGKSAGKTYELGG 234
Query: 242 PKRYLLSELL 251
P+ Y LL
Sbjct: 235 PETYSFMALL 244
>gi|254292584|ref|YP_003058607.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814]
gi|254041115|gb|ACT57910.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814]
Length = 334
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 124/237 (52%), Gaps = 10/237 (4%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR 76
+G + TVFG SG++G Y L K G ++ + R N + D+R+ G++GQV + R
Sbjct: 2 SGKLITVFGGSGFIGRYAVRALCKAGWRVRVAVR-NPMNAGDMRIGGEVGQVQIIQANVR 60
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
N I +A+ ++ V+NL+G + T +A + + G+++FI +SA+
Sbjct: 61 NRPSIVRALDGADAVLNLVGLLYQKGRNTFDGTQALGAQNIAEYAADAGIKQFIQLSAIG 120
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD + + + RTK + E+ VL + P ATI RPS ++G D+F + +
Sbjct: 121 AD-------LESNANYARTKAEAEQTVLDQIPTATILRPSLVFGPEDQFFNKFATFAK-- 171
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
F G +T QPV+VGD+A AIV A P+ G+ Y+ GP+ Y ELL++
Sbjct: 172 FLPFLPLVGGGKTKFQPVFVGDLADAIVNALSIPETQGRTYEIGGPRTYTFKELLEF 228
>gi|89067250|ref|ZP_01154763.1| NADH-ubiquinone oxidoreductase [Oceanicola granulosus HTCC2516]
gi|89046819|gb|EAR52873.1| NADH-ubiquinone oxidoreductase [Oceanicola granulosus HTCC2516]
Length = 334
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 123/237 (51%), Gaps = 16/237 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G Y+ +L KQG +I + R + +R G++GQV+ + R+DD
Sbjct: 4 LVTIFGGSGFVGRYIARRLAKQGWRIRVAVR-RPEEALFVRPYGNVGQVVPVFCNVRDDD 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R + ++VV+N +G T E P R+AR++ E GV + +H+SA+ ADP
Sbjct: 63 SVRAVTRGADVVVNCVGVLTENGRNTFQAVQEEAPERIARIAAEEGVARMVHVSAIGADP 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ P S++ RTK GE V FP A I RPS ++G D+F + M R
Sbjct: 123 DSP-------SEYARTKAAGEAGVRARFPGAVILRPSIVFGQDDEFFNRFARM---AARS 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD 252
+ G T QPV+V DVA A A + A G IY+ GP L+ E+LD
Sbjct: 173 PVLPVVGGNTRFQPVFVDDVAKAAALAVEGKAAPG-IYELGGPDVNTFSVLMREMLD 228
>gi|88608530|ref|YP_506275.1| NADH-ubiquinone oxidoreductase family protein [Neorickettsia
sennetsu str. Miyayama]
gi|88600699|gb|ABD46167.1| NADH-ubiquinone oxidoreductase family protein [Neorickettsia
sennetsu str. Miyayama]
Length = 340
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 21/264 (7%)
Query: 2 CRVHLKKGTGGRSSFNGVV----------ATVFGASGYMGSYLCNKLGKQGSQIIIPYRG 51
CR+HL K VV TVFG SG++GSY+ +L K G ++ +
Sbjct: 4 CRLHLYKRVSSFEISKTVVWVLVSLVMKKVTVFGGSGFIGSYVVRELVKSGYRVTV-VAN 62
Query: 52 NFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANV 111
+ + L+L G+LGQ+ R D+I K I S +VIN++G T + + N
Sbjct: 63 SLSCAKKLKLSGNLGQISVVHGDIRYPDDIVKGIGNSEIVINMVGVLRETSSASFGAINH 122
Query: 112 EIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEAT 171
A++A+++ E GV +FIH SAL +G +++ ++K GE+ V FPE+
Sbjct: 123 LACAQVAQIAAENGVRRFIHFSALLG--------CNGATKYGKSKLNGEEAVRSAFPESI 174
Query: 172 IFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD 231
I RP ++G D F+ + + R + ++ + + QPVYVGD+A + ++
Sbjct: 175 IIRPGVVFGEEDNFINLFVKLGRKL--RILLLPACKTASIQPVYVGDLALLVAKILQNET 232
Query: 232 AAGKIYQAVGPKRYLLSELLDWFH 255
G+IY VG KRY L+E+
Sbjct: 233 LKGEIYPVVGSKRYTLNEICSLIS 256
>gi|254796755|ref|YP_003081591.1| NADH-ubiquinone oxidoreductase [Neorickettsia risticii str.
Illinois]
gi|254590000|gb|ACT69362.1| NADH-ubiquinone oxidoreductase family protein [Neorickettsia
risticii str. Illinois]
Length = 311
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG G++GSY+ +L K G Q+ + + + L+L G+LGQ+ R+ +I
Sbjct: 5 TVFGGGGFIGSYVVRELVKSGYQVTV-VSNSLSCAKKLKLSGNLGQISVVHGDIRDPGDI 63
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
K I S +VIN++G T + + N A++A+++ E GV +FIH SAL
Sbjct: 64 VKGIGNSEIVINMVGVLRETSSTSFDAINHLACAQVAQIAAENGVRRFIHFSALLG---- 119
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
G +++ R+K GEK V FPE+ I RP ++G D F+ + + R + ++
Sbjct: 120 ----CKGATKYGRSKINGEKAVRSAFPESIIIRPGVVFGEEDNFINLFVKLGRKL--RIL 173
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ + QPVYVGD+A + ++ G IY VG KRY LSE+
Sbjct: 174 LLPACKTASIQPVYVGDIAFLVAKILQNETLKGGIYPVVGSKRYTLSEICSLIS 227
>gi|295664687|ref|XP_002792895.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Paracoccidioides sp.
'lutzii' Pb01]
gi|226278416|gb|EEH33982.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Paracoccidioides sp.
'lutzii' Pb01]
Length = 293
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 113/196 (57%), Gaps = 13/196 (6%)
Query: 57 RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR 116
R L++ GDLG+V+F Y RN I +++++S+VV NL+GR++ TKNF+ D +++ R
Sbjct: 4 RHLKVTGDLGRVVFMEYDLRNTQSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHIDGLER 63
Query: 117 LARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPS 176
+A + + V++FIH+S+ NADPN P S+F+RTK +GE+ FPE TI RP+
Sbjct: 64 IAEATAKYDVDRFIHVSSYNADPNSP-------SEFFRTKARGEQLARSIFPETTIVRPA 116
Query: 177 DMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI 236
M+G D L + ++F + ++ PV+V DV A+ + G+
Sbjct: 117 PMFGFEDNLLHKLASI-TNLFTSNHMQER-----YWPVHVIDVGHALEKMMFTDASVGQT 170
Query: 237 YQAVGPKRYLLSELLD 252
Y+ GPK Y +E+ +
Sbjct: 171 YELYGPKNYSTAEIAE 186
>gi|302654125|ref|XP_003018874.1| hypothetical protein TRV_07100 [Trichophyton verrucosum HKI 0517]
gi|291182556|gb|EFE38229.1| hypothetical protein TRV_07100 [Trichophyton verrucosum HKI 0517]
Length = 474
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 117/217 (53%), Gaps = 17/217 (7%)
Query: 39 GKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98
+QG +I+PYR R L++ GDLG+V+F Y RN I +++++S++V NLIGR
Sbjct: 168 ARQGCTVIVPYREEMTK-RHLKVTGDLGRVVFMEYDLRNTQSIEESVRHSDIVYNLIGRN 226
Query: 99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ 158
+ TKNF+ D +VE R+ + V++++H+S+ NA + P S+F+RTK Q
Sbjct: 227 YPTKNFSYEDIHVEGTERIVESVAKYDVDRYVHVSSYNASLDSP-------SEFFRTKAQ 279
Query: 159 GEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD 218
GE FPE TI RP+ M+G D+ L + ++F + ++ PV+ D
Sbjct: 280 GENVARSIFPETTIVRPAPMFGFEDRLLHRLARV-TNIFTSNHMQER-----YWPVHAID 333
Query: 219 VAAAIVAACKDPDAAGKIYQAVGPKRYL---LSELLD 252
V A+ + + ++ GPK Y +SEL+D
Sbjct: 334 VGRALEIMLMEEWTTAQTFELYGPKNYSTKEISELVD 370
>gi|339018869|ref|ZP_08644991.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
tropicalis NBRC 101654]
gi|338752030|dbj|GAA08295.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
tropicalis NBRC 101654]
Length = 326
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 26/254 (10%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQP 72
G +ATV G +G++G Y+ L + G + + P R LR G +GQ+ P
Sbjct: 12 TGKIATVLGGNGFVGQYVVQNLAEAGYTVRVASRRPDRATL-----LRPLGRVGQI--AP 64
Query: 73 YHPR--NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
++ +D + ++ +++V+NL+G +T + NV R+ARLS GV+ F+
Sbjct: 65 FYASVLDDASVACVVEGASIVVNLVGVLGSTSRQGLEAVNVLGAERVARLSAAAGVDSFV 124
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
+SAL A P S S + R++ GE V R P A+I RPS ++G D F +G
Sbjct: 125 QMSALGASP-------SAASAYGRSRAAGEDAVRRHLPHASIVRPSIIFGPEDHFFNLFG 177
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
M R+ L VY G T QPV+VGDVA A+ D AGKI+ GP+ + ++
Sbjct: 178 TMARY-LPILPVY--GANTRVQPVFVGDVAQALARIALDTTLAGKIWSLGGPEVLTMRQI 234
Query: 251 LDWFHVVMKKGEPD 264
W V+K+ + D
Sbjct: 235 YQW---VLKETQRD 245
>gi|83944942|ref|ZP_00957308.1| NADH-ubiquinone oxidoreductase 39 kDa subunit precursor, putative
[Oceanicaulis sp. HTCC2633]
gi|83851724|gb|EAP89579.1| NADH-ubiquinone oxidoreductase 39 kDa subunit precursor, putative
[Oceanicaulis sp. HTCC2633]
Length = 329
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 15/242 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFGASG++G Y+ +L K G ++ R + +L+ G +GQV + RN+D +
Sbjct: 9 TVFGASGFIGRYVVRELAKAGYRVRAATR-RPHLAHELKPMGVVGQVQLMQANLRNEDSV 67
Query: 82 RKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
R+A+ ++ V+NL+G E +NF A+ +A+ + E G+ F+ ISA+ AD
Sbjct: 68 RRAVDGAHAVVNLVGILSESGKQNFQSLQADG--AGLVAKCAAEAGITNFVQISAIGADE 125
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S++ RTK GEK V P A + RPS ++G D F +G M R F
Sbjct: 126 DSK-------SEYARTKAAGEKAVREHIPSAVVLRPSIVFGMEDGFFNKFGSMAR--FVP 176
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWFHVVM 258
G +T QP++ GDVA ++ A P AG+ ++ GP Y EL+++ +
Sbjct: 177 ALPLIGGGQTRFQPIFAGDVAECVLKAVDAPTKYAGRTFELGGPSTYSFKELMEFILTTI 236
Query: 259 KK 260
++
Sbjct: 237 RR 238
>gi|212534332|ref|XP_002147322.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Talaromyces marneffei ATCC 18224]
gi|210069721|gb|EEA23811.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Talaromyces marneffei ATCC 18224]
Length = 293
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 109/194 (56%), Gaps = 13/194 (6%)
Query: 57 RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR 116
R L++ GDLG+V+F Y RN + I +++++S+VV NL+GR++ TKNFT D +V+ R
Sbjct: 4 RHLKVTGDLGRVVFMEYDLRNTESIEESVRHSDVVYNLVGRDYPTKNFTYEDVHVDGAER 63
Query: 117 LARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPS 176
+A + +++FIH+S+ NA + P S+F++TK GE+ V FPE TI RP+
Sbjct: 64 IAEAVAKYDIDRFIHVSSYNAAEDSP-------SEFFKTKGWGERVVRNIFPETTIVRPA 116
Query: 177 DMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI 236
M+G D L H V L E PV+ DV AA+ D + A +
Sbjct: 117 PMFGFEDNLL----HKLAGVTNLLTSNHMQERF--WPVHAIDVGAALERMLYDDNTASQT 170
Query: 237 YQAVGPKRYLLSEL 250
++ GPK+Y +EL
Sbjct: 171 FELYGPKQYSTAEL 184
>gi|226293379|gb|EEH48799.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Paracoccidioides
brasiliensis Pb18]
Length = 293
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 13/196 (6%)
Query: 57 RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR 116
R L++ GDLG+V+F Y RN I +++++S+VV NL+GR++ TKNF+ D +++ R
Sbjct: 4 RHLKVTGDLGRVVFMEYDLRNTQSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHIDGLER 63
Query: 117 LARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPS 176
+A + + V++FIH+S+ NADPN P S+F+RTK +GE+ FPE TI RP+
Sbjct: 64 IAEATAKYDVDRFIHVSSYNADPNSP-------SEFFRTKARGEQLARSIFPETTIVRPA 116
Query: 177 DMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI 236
M+G D L + ++F + ++ PV+V DV A+ + +
Sbjct: 117 PMFGFEDNLLHKLASI-TNLFTSNHMRER-----YWPVHVIDVGHALEKMMFTDASVAQT 170
Query: 237 YQAVGPKRYLLSELLD 252
Y+ GPK Y +E+ +
Sbjct: 171 YELYGPKNYSTAEIAE 186
>gi|222623910|gb|EEE58042.1| hypothetical protein OsJ_08874 [Oryza sativa Japonica Group]
Length = 310
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 115/224 (51%), Gaps = 52/224 (23%)
Query: 39 GKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98
K GSQ+++P+RG+ R L+L GDLGQ++ Y+PR+ D I+ + SNVVINLIGRE
Sbjct: 39 AKMGSQVLVPFRGSEDCHRHLKLMGDLGQIVPMKYNPRDVDSIKAVMAKSNVVINLIGRE 98
Query: 99 FATKNFTIADANVEIPARLARLSKEM-GVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157
+ T+N+ + N + +LA +SKE G+ +FI +S+L A + P S+ R K
Sbjct: 99 YETRNYGFDEVNHHMAEQLAMISKEHGGIMRFIQVSSLGASASSP-------SRMLRAKA 151
Query: 158 QGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVG 217
GE+ VL+EFPE PVYV
Sbjct: 152 AGEESVLKEFPE-------------------------------------------PVYVV 168
Query: 218 DVAAAIVAACKDPDAA-GKIYQAVGPKRYLLSELLDWFHVVMKK 260
DVAAAIV + KD + GK Y+ GP+ Y + EL + + +++
Sbjct: 169 DVAAAIVNSLKDDGTSMGKTYELGGPEIYTVHELAELMYETIRE 212
>gi|220920414|ref|YP_002495715.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS
2060]
gi|219945020|gb|ACL55412.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS
2060]
Length = 381
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 125/239 (52%), Gaps = 12/239 (5%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G ++ L K+G +I + R + L+ G +GQ++ + R+ +
Sbjct: 16 TVFGGSGFLGRHVVRALAKRGYRIRVAVRRPDL-AQFLQPLGRVGQIVAVQANLRDAASV 74
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+++++VVINL+G + N + + +AR + +G + IH+SA+ ADP
Sbjct: 75 TRAVEHADVVINLVGILQESGNQSFQRLQADGAGLVARAATAIGA-RMIHVSAIGADPES 133
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P+ Y RTK GE +VL PEA IFRPS ++G GD F + + R +
Sbjct: 134 PSAY-------ARTKAAGEAKVLAACPEAVIFRPSIIFGPGDSFFNRFAGLARLM---PV 183
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260
+ G T QPV+VGDVA AI G IY+ GP+ L +L+++ V K+
Sbjct: 184 LPLAGAGTRMQPVFVGDVAEAIARTVDGKAKPGTIYELGGPEILTLQQLVEYTLQVTKR 242
>gi|83591356|ref|YP_425108.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Rhodospirillum
rubrum ATCC 11170]
gi|386348037|ref|YP_006046285.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Rhodospirillum
rubrum F11]
gi|83574270|gb|ABC20821.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Rhodospirillum
rubrum ATCC 11170]
gi|346716473|gb|AEO46488.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Rhodospirillum
rubrum F11]
Length = 340
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 126/261 (48%), Gaps = 24/261 (9%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
G V TVFG SG +G L L QG+++ + R + L+ G LGQ+
Sbjct: 1 MTGRVVTVFGGSGSIGRQLVALLADQGARVRVAVR-DTEKAHFLKPLGQLGQIAPISASV 59
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ +++A++ ++ V+NL+G + T +V+ A +AR S E GV+ IH+SAL
Sbjct: 60 SDAASVKRAVEGADQVVNLVGILAESGRRTFQAVHVDGAATVARASAEAGVDALIHMSAL 119
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD + + + +TK GEK V FP ATI RPS ++G D F + + R
Sbjct: 120 GADE-------ASDANYSKTKALGEKAVREAFPAATILRPSVVFGPDDGFFNLFAGLQRL 172
Query: 196 V----------FRK-----LAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQA 239
FR+ + G K QPVYVGDVA A++A P GK Y+
Sbjct: 173 SPVLPYFTRDGFRRGGSGVCGIDLAGSGGPKFQPVYVGDVARAMIAILDTPALRGKTYEL 232
Query: 240 VGPKRYLLSELLDWFHVVMKK 260
GP+ Y + E++D V ++
Sbjct: 233 GGPRVYSMKEIMDLVVAVTRR 253
>gi|444509043|gb|ELV09161.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Tupaia chinensis]
Length = 247
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 74/97 (76%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +GVVATVFGASG++G Y+ N LG+ GSQ+I+P+R YDV LR GDL
Sbjct: 41 IPHGKGGRSSVSGVVATVFGASGFLGRYVVNYLGRMGSQVIVPHRCEAYDVMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATK 102
GQ+LF + R+ D IR+A+++SNVVINL+GR++ T
Sbjct: 101 GQILFLEWSGRDKDSIRQAVEHSNVVINLVGRDWETS 137
>gi|114568667|ref|YP_755347.1| NAD-dependent epimerase/dehydratase [Maricaulis maris MCS10]
gi|114339129|gb|ABI64409.1| NAD-dependent epimerase/dehydratase [Maricaulis maris MCS10]
Length = 321
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 125/235 (53%), Gaps = 10/235 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ L K G ++ + R + +DLR+ G +GQV + R
Sbjct: 6 IITVFGGSGFVGRHVVRALAKAGYRVRVATR-RPHLAQDLRVMGVVGQVQLVQANLRVAA 64
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +A+ ++ V+NL+G + T + + A +A+ + MG+E+ + ISA+ A
Sbjct: 65 SVERALDGASGVVNLVGVLNESGRQTFSRLHAVGTATIAQAAAGMGIERMVQISAIGASA 124
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S++ RTK +GE VL P+ATI RPS ++G+ D F + M R V
Sbjct: 125 DS-------ASRYARTKAEGEAAVLAAMPDATILRPSIVFGTEDSFFNRFAAMARFV-PA 176
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
L ++ G +T QPV+ GDV A++AA + D G+ Y+ GP Y EL+ +
Sbjct: 177 LPLFGGG-KTRFQPVFAGDVGKAVLAAFERSDTRGQTYELGGPGVYTFEELMRFI 230
>gi|254420040|ref|ZP_05033764.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Brevundimonas
sp. BAL3]
gi|196186217|gb|EDX81193.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Brevundimonas
sp. BAL3]
Length = 325
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 15/236 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
V T+FG SG++GS L ++G +I + R + +++ GD GQ+ F N +
Sbjct: 8 VVTLFGGSGFIGSQAVRALARRGWRIRVAVRNPVLAI-EVQPLGDPGQIQFMRCDVTNAE 66
Query: 80 EIRKAIKYSNVVINLIGREF---ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
++ A++ S+ V+NL+G + F A+VE +A+ SK GVE+ + ISA+
Sbjct: 67 DVAAAVRGSHAVVNLVGVLHDGGGKRGFK--SAHVEAARNIAQASKAAGVERVVQISAIG 124
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N + Y RTK + E E+ +P+A I RPS ++G+ D FL + M
Sbjct: 125 ADANSRSAY-------ARTKGEAENEIRAVYPDAVILRPSLVFGASDSFLNRFAAM--AT 175
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
G +T QPVYVGDVA A+ A DAAG+ ++ GP + E+L+
Sbjct: 176 MAPALPLIGGGKTQFQPVYVGDVAEAVARAVIRGDAAGRTFELGGPDVFSFREVLE 231
>gi|163850440|ref|YP_001638483.1| NADH dehydrogenase [Methylobacterium extorquens PA1]
gi|163662045|gb|ABY29412.1| NADH dehydrogenase [Methylobacterium extorquens PA1]
Length = 389
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 133/248 (53%), Gaps = 25/248 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL----CGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R DL L G +GQ++ +
Sbjct: 18 LVTVFGGSGFLGRHVVRALAKRGYRIRVAVRRP-----DLALFLQPLGKVGQIVGVQANL 72
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
R D IR+A+++S++VINL+G +E ++ F+ E +AR + + K +H+S
Sbjct: 73 RYPDSIRRAVEHSDIVINLVGILQESGSQRFS--KLQTEGAGEIARAAAAV-GAKLVHVS 129
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
AL ADP+ P+ Y R+K GE EVLR P+A IFRPS ++G GD F + +
Sbjct: 130 ALGADPDSPSLY-------ARSKALGEAEVLRASPDAVIFRPSLVFGPGDGFFNRFASLA 182
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ A+ G +T QPV+VGDVA AI A A G++Y+ GP+ L + +
Sbjct: 183 TFL---PALPLAGAQTRFQPVFVGDVAEAIARAVDGLAAGGRVYELGGPEVNTLEYFVRY 239
Query: 254 -FHVVMKK 260
V M++
Sbjct: 240 MLEVTMRR 247
>gi|330993411|ref|ZP_08317346.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Gluconacetobacter
sp. SXCC-1]
gi|329759441|gb|EGG75950.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Gluconacetobacter
sp. SXCC-1]
Length = 293
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 11/234 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ATVFG SG++G + +L + G + + R LR+ GD+GQV+ ++
Sbjct: 1 MATVFGGSGFVGQSVVGRLARAGYVVRVAGR-TARLAATLRMLGDVGQVVPVVASIMDEA 59
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
A++ ++ INL+G T +VE AR+ARL+ GVE+ IH+SAL AD
Sbjct: 60 GCVAALEGCDLAINLVGILSPRGPATFEAIHVEGAARVARLAACAGVERLIHVSALGADV 119
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ P+ Y R+K +GE V R P A I RPS ++G G F + M R +
Sbjct: 120 SSPSAY-------ARSKAEGECAVTRAMPGAVIIRPSLIFGVGGPFPAMFARMARFM--- 169
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
V G T QPV+VGDVA ++ D AG +++ GP+ + +++ W
Sbjct: 170 PVVPVFGAATRFQPVWVGDVAEGMLRLATDGSMAGAVFEFGGPRIMTMRQIVAW 223
>gi|392378170|ref|YP_004985329.1| putative NAD-dependent epimerase/dehydratase [Azospirillum
brasilense Sp245]
gi|356879651|emb|CCD00575.1| putative NAD-dependent epimerase/dehydratase [Azospirillum
brasilense Sp245]
Length = 329
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 129/242 (53%), Gaps = 19/242 (7%)
Query: 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLF 70
S+ V TVFG SG++G +L +L K G+ + + P + NF L+ G +GQ++
Sbjct: 2 SYRSEVVTVFGGSGFVGRHLIRRLAKTGAIVRVVSRHPNKANF-----LKTAGSVGQIVP 56
Query: 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
++D + +AI+ ++ VINLIG + + +V+ PAR+AR++K GV + +
Sbjct: 57 MAADVKDDQSVARAIQGADTVINLIGTLYERGAWNFQTVHVDAPARIARIAKASGVRRLV 116
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
H+SA+ AD S + ++K GE+ V + FP ATI RPS ++G D F +
Sbjct: 117 HVSAIGAD-------AKSASAYAKSKAAGEQAVAQAFPGATIVRPSIVFGPEDGFFNKFA 169
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
M + A+ G T QPVYVGD+A AI AA A G+ ++ GP+ Y EL
Sbjct: 170 AMAQV---SPALPLIGGSTKFQPVYVGDLADAIAAAATLDSAVGRTFELGGPRVYSFKEL 226
Query: 251 LD 252
+
Sbjct: 227 MQ 228
>gi|403356400|gb|EJY77793.1| NADH:ubiquinone oxidoreductase 39 kDa subunit [Oxytricha trifallax]
Length = 392
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 145/288 (50%), Gaps = 27/288 (9%)
Query: 1 MCRVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN--FYDVR- 57
+ R+H+ + + R+S +G+ ATVFG + +GS + L + GSQ I PYR + +D R
Sbjct: 40 LQRLHVHE-SQFRNSISGIQATVFGGTSSLGSVVGGMLTRMGSQNIYPYRNSATLWDNRY 98
Query: 58 -DLRLCGDLGQVLFQPYHP-RNDDEIRKAIKYSNVVINLIGRE-FATKNFTIADANVEIP 114
+L+ DLG + + N+ EI +K SNVVI+ IG F ++ D+N+ +P
Sbjct: 99 KELKTTADLGNKAYIKLNDFTNEKEIAYTLKDSNVVISCIGSHVFTKRDKDFEDSNIRVP 158
Query: 115 ARLARLSKEMG-VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIF 173
+A+ K V++FI++SA ADPN S+ RTK+ GE+EV +P+ TI
Sbjct: 159 MAIAKAVKNSDKVKRFIYVSAAGADPN-------SHSRRLRTKWIGEQEVKEIYPDVTII 211
Query: 174 RPS---DMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230
RP+ ++ S +G M +F ++ +G QPV+V DVA A++ K
Sbjct: 212 RPTYIFNLLHSNTTIAGKWG-MQLKMFNRMNWLCEGMNGQVQPVFVNDVALAMLNCLKME 270
Query: 231 DAAGKIYQAVGPKRYLLSELLDWF--------HVVMKKGEPDYGYYRY 270
+ G+ Y GP E+ + F + + K E Y YY Y
Sbjct: 271 ETIGQTYDLGGPNILTYEEIYEQFFNQTGVKPYTAVVKLEDAYEYYHY 318
>gi|406990515|gb|EKE10168.1| NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 9
[uncultured bacterium]
Length = 308
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 134/281 (47%), Gaps = 19/281 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T+FG SG++G Y+ K +G I + R N L+ G++GQ+ + ++
Sbjct: 5 TIFGGSGFVGRYIVEKFAAKGHLIRVAVR-NPIAANFLKPLGEVGQITPIQASILSTKDV 63
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
A+ S++VINL+G + + T +VE +A + E+ + F+H+SAL A N
Sbjct: 64 ENAMAGSDIVINLVGILYEKGSQTFEAIHVEGARCVAEKAAELHIPVFLHMSALGAKKNS 123
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
+ Y S TK +GE+ VL+ FPEAT+FRPS ++G D FL + M R F
Sbjct: 124 RSRYAS-------TKARGEEVVLKHFPEATVFRPSVIFGPEDAFLNRFAEMAR--FSPFL 174
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
G +T QPVYVGDVA + A ++ GK Y+ G + Y +L+ + +
Sbjct: 175 PLIGGGKTRFQPVYVGDVAECFLKAAFKKESRGKTYELGGTEIYTFKQLMAYLLKTI--- 231
Query: 262 EPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVE 302
YR L L + P LTP++VE
Sbjct: 232 ------YRKRLLLPVPFSLARIMATFAQFLPTPPLTPDQVE 266
>gi|159046130|ref|YP_001534924.1| ubiquinone dependent NADH dehydrogenase [Dinoroseobacter shibae DFL
12]
gi|157913890|gb|ABV95323.1| ubiquinone dependent NADH dehydrogenase [Dinoroseobacter shibae DFL
12]
Length = 327
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 125/241 (51%), Gaps = 12/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G Y+ ++ ++G ++ + R + +R G +GQV + R+D
Sbjct: 4 LVTIFGGSGFVGRYIARRMAQEGWRVRVAVR-RPNEALFVRTYGAVGQVEPILSNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
++ A+ ++VVIN +G T T AR+ARLS E GV +F+ ISA+ ADP
Sbjct: 63 SVQAAVTGADVVINCVGILSETGKNTFGLVQSHGAARVARLSAEAGVGRFVQISAIGADP 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S + RTK +GE+ VL+ PEA I RPS ++G D+F + M R +
Sbjct: 123 -------AAKSDYARTKAEGEQAVLQAMPEAVILRPSIVFGPEDQFFNRFASMSR-LGPI 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
L V G ET QPVYV DVA A V A G IY+ GP EL+ V+
Sbjct: 175 LPVV--GAETKFQPVYVDDVARAAVKAALGQAKPG-IYELGGPDVNSFRELMAHMLSVID 231
Query: 260 K 260
+
Sbjct: 232 R 232
>gi|349686477|ref|ZP_08897619.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Gluconacetobacter
oboediens 174Bp2]
Length = 297
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 116/234 (49%), Gaps = 11/234 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
VATVFG +G++G + +L + G + + R LR+ GD+GQV+ ++
Sbjct: 5 VATVFGGAGFVGRSVVGRLARAGYVVRVVGR-TAAKAATLRMLGDVGQVVPVVASIMDEA 63
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
AI+ S VVINL+G T +VE R+ARL+ GV + IH+SAL A
Sbjct: 64 ACVAAIEGSEVVINLVGILSPHGAETFEAIHVEGAGRVARLAAASGVRRLIHVSALGAQ- 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+S S + R+K +GE V R PEA I RPS ++G + M R F
Sbjct: 123 ------VSSASAYARSKAEGECAVSRAMPEAVIVRPSLIFGVDGPIPAMFARMAR--FMP 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ V G T QPV+VGDVA + D AG I++ GPK + +++ W
Sbjct: 175 I-VPVFGAATRFQPVWVGDVAEGLARIATGADMAGAIFEFGGPKVLTMRDIVAW 227
>gi|239787682|emb|CAX84190.1| NADH-ubiquinone oxidoreductase [uncultured bacterium]
Length = 335
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 132/261 (50%), Gaps = 29/261 (11%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
V TVFGASG++G + +L + G + R + L+ G++GQ++ + ++
Sbjct: 4 VVTVFGASGFIGRQVVQRLARAGHVVRAAVR-DPIGAAFLKPMGEVGQIIPIKANLQDKA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+++A + ++ VINL+G F +VE R+A ++ G + +H+SAL AD
Sbjct: 63 SVQRACQGADAVINLVGILFERGASKFEAIHVEGAKRVAEAARAGGAKSLVHVSALGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N P+ Y R+K +GE V FPEA I RPS ++G D F + + R +
Sbjct: 123 NSPSAY-------ARSKAKGEAAVQAAFPEAAIIRPSVVFGPDDDFFNRFAGLAR-LTGL 174
Query: 200 LAVYK----KGEETIK----------------QPVYVGDVAAAIVAACKDPDAAGKIYQA 239
L V+ K + ++K QPVYVGD+A AI+AA P A G+I++
Sbjct: 175 LPVFVTDGFKPKFSLKDLEFDFDLFGSGGAAFQPVYVGDLADAILAALDRPSARGRIFEI 234
Query: 240 VGPKRYLLSELLDWFHVVMKK 260
VGP+ L E+++ +K+
Sbjct: 235 VGPRPMHLKEVMEMVSSAIKR 255
>gi|85709521|ref|ZP_01040586.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Erythrobacter sp. NAP1]
gi|85688231|gb|EAQ28235.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Erythrobacter sp. NAP1]
Length = 334
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 128/238 (53%), Gaps = 16/238 (6%)
Query: 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY 73
SS + + TVFG SGY+G+Y+ L +G+++ I R N L+ +LGQ+ F
Sbjct: 5 SSLSDALVTVFGGSGYLGNYVAQALLARGARVRIASR-NPEKAFPLKPLANLGQLQFAHC 63
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
++ ++ ++ + V+NL+G +F+ + + E P R+A ++ E G + F+H+S
Sbjct: 64 DITKEESLKASLHGATHVVNLVG-DFSGN---LEELMGEAPGRMAAIASENGAKAFVHVS 119
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ AD + T Y R K GE+ VL FP+AT+ RPS ++G D FL +G M
Sbjct: 120 AIGADASSSTGY-------ARGKALGEERVLAAFPQATVLRPSIIFGKDDNFLNMFGGMI 172
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSEL 250
+ L V+ G + Q V+V DVA A+ +DP A G+ ++ GP++ + E+
Sbjct: 173 -EMLPVLPVF--GPDAKMQLVFVDDVAEAVAFCLEDPGAHGGETFELGGPEQLTMMEI 227
>gi|240137849|ref|YP_002962321.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Methylobacterium extorquens AM1]
gi|418063724|ref|ZP_12701357.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
DSM 13060]
gi|240007818|gb|ACS39044.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Methylobacterium extorquens AM1]
gi|373557192|gb|EHP83660.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
DSM 13060]
Length = 389
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 132/248 (53%), Gaps = 25/248 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL----CGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R DL L G +GQ++ +
Sbjct: 18 LVTVFGGSGFLGRHVVRALAKRGYRIRVAVRRP-----DLALFLQPLGKVGQIVGVQANL 72
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
R D IR+A+++S++VINL+G +E ++ F+ E +AR + + K +H+S
Sbjct: 73 RYPDSIRRAVEHSDIVINLVGILQESGSQRFS--KLQTEGAGEIARAAAAV-GAKLVHVS 129
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
AL ADP+ P+ Y R+K GE EVLR P+A IFRPS ++G GD F + +
Sbjct: 130 ALGADPDSPSLY-------ARSKALGEAEVLRASPDAVIFRPSLVFGPGDGFFNRFASLA 182
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ A+ G +T QPV+VGDVA AI A G++Y+ GP+ L + +
Sbjct: 183 TFL---PALPLAGAQTRFQPVFVGDVAEAIARAVDGLAPGGRVYELGGPEVNTLEYFVRY 239
Query: 254 -FHVVMKK 260
V M++
Sbjct: 240 MLEVTMRR 247
>gi|426401983|ref|YP_007020955.1| short chain dehydrogenase family protein [Candidatus
Endolissoclinum patella L2]
gi|425858651|gb|AFX99687.1| short chain dehydrogenase family protein [Candidatus
Endolissoclinum patella L2]
Length = 314
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 125/239 (52%), Gaps = 14/239 (5%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
+G V TVFGASG++G + KL K G+++ R N + L+ G +GQ+
Sbjct: 1 MDGKVVTVFGASGFIGRSVVYKLAKCGARVNSVCR-NVEKAKFLKTMGAVGQITLTSVDV 59
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
+ I +AIK +++VINLIG E NF + +A+ +K +GV+ +H+S
Sbjct: 60 TSVKAIAQAIKGASIVINLIGILNEHRRNNFN--AVHCAASGAIAKAAKLLGVKAMLHVS 117
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
AL AD + S++ R+K+ GEK V F EA I RPS ++G D F + +M
Sbjct: 118 ALCADEH-------SLSEYARSKFAGEKLVRTAFSEAIILRPSIVFGKDDSFFNKFAYMA 170
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ V L + G QPVYV D+A AI+AA P A G+ Y+ GP Y EL++
Sbjct: 171 Q-VLPILPLIGGGTSKF-QPVYVIDLAEAIIAALNTPAAYGQTYEVGGPSVYSFRELME 227
>gi|84500664|ref|ZP_00998913.1| NADH ubiquinone oxidoreductase, putative [Oceanicola batsensis
HTCC2597]
gi|84391617|gb|EAQ03949.1| NADH ubiquinone oxidoreductase, putative [Oceanicola batsensis
HTCC2597]
Length = 327
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 126/242 (52%), Gaps = 20/242 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G Y+ ++ +QG ++ + R + D +R G +GQV + R+DD
Sbjct: 4 LVTIFGGSGFLGRYIARRMARQGWRVRVATR-HPNDAMFVRTYGVVGQVEPIFCNIRDDD 62
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+R+A+ +S+ V+N +G E F A E R+AR++ E GV++ +HISA+ A
Sbjct: 63 SVRQALGHSDAVVNCVGILSEKGRNGFDAVQA--EGAGRVARIAAEEGVDRMVHISAIGA 120
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D + S + RTK GE +VL P A I RPS M+G+ D+F + M R F
Sbjct: 121 DE-------TSDSDYARTKAMGEAKVLEHMPGAMILRPSIMFGAEDEFFNRFAGMTR--F 171
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDW 253
+ + G T QPVYV DVAAA A G IY+ GP R + E+L
Sbjct: 172 SPI-LPMVGGRTRFQPVYVDDVAAAAEMGALGT-APGGIYELGGPDTRTFREFMREMLAV 229
Query: 254 FH 255
H
Sbjct: 230 IH 231
>gi|427427384|ref|ZP_18917428.1| NAD-dependent epimerase/dehydratase [Caenispirillum salinarum AK4]
gi|425883310|gb|EKV31986.1| NAD-dependent epimerase/dehydratase [Caenispirillum salinarum AK4]
Length = 343
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 28/251 (11%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G +L +L + G ++ + R + L+ GDLGQ+ P +DD
Sbjct: 7 LVTVFGGSGFIGRHLVRRLARNGDRVRVAVR-DTEKASFLKPMGDLGQISLVPASILDDD 65
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+++A++ ++ V+NL+G + T +VE P R+ARL+KE GV + + +SAL A
Sbjct: 66 SVKRAVEGADAVVNLVGILAESGKATFERMHVEGPERIARLAKEAGVARMVQVSALGASK 125
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ + Y +TK +GE+ V + FP+A I RPS ++G D+F + + R +
Sbjct: 126 DSDSVY-------AQTKARGEEAVRKHFPDADILRPSVVFGPEDQFFNMFAKIAR-LSPV 177
Query: 200 LAVYKKGEETIK-------------------QPVYVGDVAAAIVAACKDPDAAGKIYQAV 240
L + +K QPVYVGDVA AI+ G+ ++
Sbjct: 178 LPFFTDDAPALKKDPSGRFQLDLVGGGGPKFQPVYVGDVAEAIMRLLDADAPTGQTFELG 237
Query: 241 GPKRYLLSELL 251
G + + +++
Sbjct: 238 GDEVVSMRDIM 248
>gi|238579827|ref|XP_002389170.1| hypothetical protein MPER_11741 [Moniliophthora perniciosa FA553]
gi|215451144|gb|EEB90100.1| hypothetical protein MPER_11741 [Moniliophthora perniciosa FA553]
Length = 285
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 120/210 (57%), Gaps = 15/210 (7%)
Query: 43 SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATK 102
+Q+++P+R D R +L GDLGQ++ + RN+++I + +++S++V NL+GR++ TK
Sbjct: 3 TQVMVPFRDE-DDKRHSKLMGDLGQIVSLEWDIRNEEQIAECVRHSDIVFNLVGRDYETK 61
Query: 103 NFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKE 162
NF+ + + + R+A+++ ++GV + +H+S LNA + S+FY+TK +GE+
Sbjct: 62 NFSFKNVHADGAERIAKVAAQVGVPRLVHLSHLNASS-------TSESKFYQTKAEGEER 114
Query: 163 VLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222
V + ATI RP+ MYG D+FL +W ++ KL +T +PV+V DVA A
Sbjct: 115 VKAVYDGATIVRPATMYGYEDRFLNNMA-VWP-IWWKL----NDAKTKTRPVHVMDVAQA 168
Query: 223 IVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ P + + GP LLD
Sbjct: 169 LANLVHGPKLS-RTVNLPGPSTLTHEYLLD 197
>gi|410421469|ref|YP_006901918.1| hypothetical protein BN115_3693 [Bordetella bronchiseptica MO149]
gi|408448764|emb|CCJ60449.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
Length = 303
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 21/236 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G +L +L Q ++++P R + RDL++ L V +D E+
Sbjct: 5 VIGGTGFIGRHLVARLAAQEHKVLVPTR-RYNKGRDLQV---LPTVTLIEADVHDDAELD 60
Query: 83 KAIKYSNVVINLIGREFATKN----FTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + + V+NL+G + A A+V +P R+A+ GV + +H+SAL AD
Sbjct: 61 RLMHRCDAVVNLVGVLHGGRGRPYGAGFARAHVLLPERIAQACVRNGVARMLHVSALGAD 120
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEA---TIFRPSDMYGSGDKFLRYYGHMWRH 195
P+ Y+ R+K GE + R F T+FRPS ++G D F R + + R
Sbjct: 121 SGGPSMYL-------RSKGDGEAAIQRVFGATGGWTLFRPSVVFGPDDNFTRMFARLAR- 172
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+F L + G + QPVYVGDVA A++AA + AAGKIY+ GP+ Y L E++
Sbjct: 173 LFPVLPL--AGARSRMQPVYVGDVADAMMAALANGHAAGKIYELCGPQVYTLGEIV 226
>gi|312113307|ref|YP_004010903.1| NAD-dependent epimerase/dehydratase [Rhodomicrobium vannielii ATCC
17100]
gi|311218436|gb|ADP69804.1| NAD-dependent epimerase/dehydratase [Rhodomicrobium vannielii ATCC
17100]
Length = 327
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 13/237 (5%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR 76
N V TVFG SG++G Y+ L K G +I + R + L+ G +GQ+ + R
Sbjct: 7 NSTVVTVFGGSGFLGRYVVQALAKAGFRIKVAVRRPELALY-LQPLGSVGQIALVSANVR 65
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
++ + +A++ ++ V+NL+G + + + P +A+ ++ GV++F+H+SA+
Sbjct: 66 DEKSVAEAVRGADAVVNLVGILAPSGRQRFKAVHADAPELIAKAARAAGVKRFVHVSAIG 125
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL-RYYGHMWRH 195
AD S + RTK +GE L FP+ I RPS ++G D+F R+ G
Sbjct: 126 ADR-------LSHSAYARTKGEGEARALAAFPQTVILRPSLVFGPEDQFFNRFAGLAALS 178
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
L G T QPVYVGDVA A+ AA + G +Y+ GP Y E+L
Sbjct: 179 PVLPLI----GGNTRFQPVYVGDVARAVTAAVEGRATEGAVYELGGPSVYTFREILQ 231
>gi|148260665|ref|YP_001234792.1| NADH dehydrogenase (ubiquinone) [Acidiphilium cryptum JF-5]
gi|338980526|ref|ZP_08631796.1| NADH dehydrogenase (ubiquinone) [Acidiphilium sp. PM]
gi|146402346|gb|ABQ30873.1| NADH dehydrogenase (ubiquinone) [Acidiphilium cryptum JF-5]
gi|338208559|gb|EGO96408.1| NADH dehydrogenase (ubiquinone) [Acidiphilium sp. PM]
Length = 316
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 125/242 (51%), Gaps = 23/242 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQV--LFQPY 73
VATVFGASG++G ++ +L G + R G F LR GD+GQ+ L+ P
Sbjct: 6 VATVFGASGFIGRHVVKRLAAAGWVVRAAMRDTEAGAF-----LRPLGDVGQIVPLYAPL 60
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
N+ +R+AI+ + VINL+G + + AR+A L+ E GV +H+S
Sbjct: 61 D--NEAALRRAIEGATCVINLVGILAERRRGDFDRVQHQGAARIATLAAEAGVRALVHVS 118
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ ADP SQ+ R+K GE V FP ATI RPS ++G D F +G M
Sbjct: 119 AIGADPK-------AASQYARSKGLGEAAVRAAFPAATILRPSIVFGPEDGFFNRFGAMA 171
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
L V + ET QPVYVGDVA A++AA P+ AG Y+ GP+ +LL +
Sbjct: 172 AQ-LPFLPVIEG--ETKFQPVYVGDVADAVMAAIDRPELAGATYELGGPEVRSFRDLLAY 228
Query: 254 FH 255
+
Sbjct: 229 IN 230
>gi|427815993|ref|ZP_18983057.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410566993|emb|CCN24563.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 303
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 124/236 (52%), Gaps = 21/236 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G +L +L Q ++++P R + RDL++ L V +D E+
Sbjct: 5 VIGGTGFIGRHLVARLAAQEHKVLVPTR-RYNKGRDLQV---LPTVTLIEADVHDDAELD 60
Query: 83 KAIKYSNVVINLIGREFATKN----FTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + + V+NL+G ++ A A+V +P R+A+ GV + +H+SAL AD
Sbjct: 61 RLMHRCDAVVNLVGVLHGSRGRPYGAGFARAHVLLPERIAQACVRNGVARMLHVSALGAD 120
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEA---TIFRPSDMYGSGDKFLRYYGHMWRH 195
P+ Y+ R+K GE + R F T+FRPS ++G D F R + + R
Sbjct: 121 SGGPSMYL-------RSKGDGEAAIQRVFGATGGWTLFRPSVVFGPDDNFTRMFARLAR- 172
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+F L + G + QPVYVGDVA A++AA + AGKIY+ GP+ Y L E++
Sbjct: 173 LFPVLPL--AGARSRMQPVYVGDVADAMMAALANGHTAGKIYELCGPQVYTLGEIV 226
>gi|326403859|ref|YP_004283941.1| putative NADH dehydrogenase [Acidiphilium multivorum AIU301]
gi|325050721|dbj|BAJ81059.1| putative NADH dehydrogenase [Acidiphilium multivorum AIU301]
Length = 316
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 125/242 (51%), Gaps = 23/242 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQV--LFQPY 73
VATVFGASG++G ++ +L G + R G F LR GD+GQ+ L+ P
Sbjct: 6 VATVFGASGFIGRHVVKRLAAAGWVVRAAMRDTEAGAF-----LRPLGDVGQIVPLYAPL 60
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
N+ +R+AI+ + VINL+G + + AR+A L+ E GV +H+S
Sbjct: 61 D--NEAALRRAIEGATCVINLVGILAERRRGDFDRVQHQGAARIATLAAEAGVRALVHVS 118
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ ADP SQ+ R+K GE V FP ATI RPS ++G D F +G M
Sbjct: 119 AIGADPK-------AASQYARSKGLGEAAVKAAFPAATILRPSIVFGPEDGFFNRFGAMA 171
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
L V + ET QPVYVGDVA A++AA P+ AG Y+ GP+ +LL +
Sbjct: 172 AQ-LPFLPVIEG--ETKFQPVYVGDVADAVMAAIDRPELAGATYELGGPEVRSFLDLLAY 228
Query: 254 FH 255
+
Sbjct: 229 IN 230
>gi|427825489|ref|ZP_18992551.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|410590754|emb|CCN05847.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 303
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 123/236 (52%), Gaps = 21/236 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G +L +L Q ++++P R + RDL++ L V +D E+
Sbjct: 5 VIGGTGFIGRHLVARLAAQEHKVLVPTR-RYNKGRDLQV---LPTVTLIEADVHDDAELD 60
Query: 83 KAIKYSNVVINLIGREFATKN----FTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + + V+NL+G + A A+V +P R+A+ GV + +H+SAL AD
Sbjct: 61 RLMHRCDAVVNLVGVLHGGRGRPYGAGFARAHVLLPERIAQACVRNGVARMLHVSALGAD 120
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEA---TIFRPSDMYGSGDKFLRYYGHMWRH 195
P+ Y+ R+K GE V R F T+FRPS ++G D F R + + R
Sbjct: 121 SGGPSMYL-------RSKGDGEAAVQRVFGATGGWTLFRPSVVFGPDDNFTRMFARLAR- 172
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+F L + G + QPVYVGDVA A++AA + AGKIY+ GP+ Y L E++
Sbjct: 173 LFPVLPL--AGARSRMQPVYVGDVADAMMAALANGHTAGKIYELCGPQVYTLGEIV 226
>gi|188580578|ref|YP_001924023.1| NADH dehydrogenase [Methylobacterium populi BJ001]
gi|179344076|gb|ACB79488.1| NADH dehydrogenase [Methylobacterium populi BJ001]
Length = 389
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 129/246 (52%), Gaps = 21/246 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL----CGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R DL L G +GQ++ +
Sbjct: 18 LVTVFGGSGFLGRHVVRALAKRGYRIRVAVRRP-----DLALFLQPLGKVGQIVAVQANL 72
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R D IR+A+++S++VINL+G T + + E +AR + + K +H+SAL
Sbjct: 73 RYPDSIRRAVEHSDIVINLVGILQETGSQRFSKLQTEGAGEIARAAAAV-GAKLVHVSAL 131
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADP+ P+ Y R+K GE +VLR P+A IFRPS ++G GD F + +
Sbjct: 132 GADPDSPSLY-------ARSKALGEAQVLRACPDAVIFRPSLVFGPGDSFFNRFAALATF 184
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW-F 254
+ A+ G ++ QPV+VGDVA AI A G++Y+ GP+ L + +
Sbjct: 185 L---PALPLAGAQSRFQPVFVGDVAEAIARAVDGLVPGGRVYELGGPEVNTLEYFVRYML 241
Query: 255 HVVMKK 260
V M++
Sbjct: 242 EVTMRR 247
>gi|342183755|emb|CCC93235.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 373
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 128/259 (49%), Gaps = 23/259 (8%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGD 64
+G G ++ GV FGA+G +G+++ + G I+P+R G VR LR+ GD
Sbjct: 19 RGGGSEANTMGVNVATFGATGILGTHIHHLCCYHGFTSILPFRFRAGLTSGVRHLRMAGD 78
Query: 65 --LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR-------EFATKNFTIADANVEIPA 115
+GQ Y + ++ ++ + VIN++G E + F++ NVE P
Sbjct: 79 GTVGQNFDTDYEIDKEFVVKSILEKVDNVINVVGVWQEPAVYENSQSWFSMEAVNVEWPR 138
Query: 116 RLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRP 175
LAR +EMG+ + H+S + AD N P S+ R K E VL EFP ATI R
Sbjct: 139 MLARWCREMGILRLTHMSMVGADLNSP-------SKLLRQKRAAELAVLEEFPTATIIRG 191
Query: 176 SDMYGSGD-KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG 234
+D++ D + RY M + ++ + + KG+ I QPV+ GD+A A + G
Sbjct: 192 TDIFAENDYSYSRYL--MAQRKYKIVPMPNKGQR-IHQPVFAGDLAEAACRSILLDHTEG 248
Query: 235 KIYQAVGPKRYLLSELLDW 253
+I + GP R+ S+ L W
Sbjct: 249 RIAELGGPVRFTTSDFLRW 267
>gi|340056603|emb|CCC50938.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 373
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 128/259 (49%), Gaps = 23/259 (8%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGD 64
+G G ++ GV FGA+G +G+++ + G I+P+R G VR LR+ GD
Sbjct: 19 RGGGSEANTMGVNIATFGATGVLGTHIHHLCCYHGFTSILPFRFRAGMASGVRHLRMAGD 78
Query: 65 --LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR-------EFATKNFTIADANVEIPA 115
+GQ Y + ++ ++ + VIN++G E + F++ NVE P
Sbjct: 79 GTVGQNFDTDYEIDKEFVVKSILEKVDNVINVVGAWQEPTIYENSQSWFSMEAINVEWPR 138
Query: 116 RLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRP 175
LAR +EMG+ + H+S + AD N P S+ R K E VL EFP ATI R
Sbjct: 139 MLARWCREMGILRLTHMSMVGADLNSP-------SKVLRQKRAAEIAVLEEFPTATIIRG 191
Query: 176 SDMYGSGD-KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG 234
+D++ D + RY M + ++ + + KGE I QPV+ GD+A A + G
Sbjct: 192 TDIFAENDFSYSRYL--MAQRKYKIVPMPNKGER-IHQPVFAGDLAEAACRSILLDHTEG 248
Query: 235 KIYQAVGPKRYLLSELLDW 253
+I + GP R+ S+ L W
Sbjct: 249 RIAELGGPVRFKTSDFLRW 267
>gi|33594302|ref|NP_881946.1| hypothetical protein BP3419 [Bordetella pertussis Tohama I]
gi|33598085|ref|NP_885728.1| hypothetical protein BPP3569 [Bordetella parapertussis 12822]
gi|33602978|ref|NP_890538.1| hypothetical protein BB4004 [Bordetella bronchiseptica RB50]
gi|384205599|ref|YP_005591338.1| hypothetical protein BPTD_3371 [Bordetella pertussis CS]
gi|408417387|ref|YP_006628094.1| hypothetical protein BN118_3670 [Bordetella pertussis 18323]
gi|410471819|ref|YP_006895100.1| hypothetical protein BN117_1096 [Bordetella parapertussis Bpp5]
gi|33564377|emb|CAE43682.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|33566643|emb|CAE38853.1| conserved hypothetical protein [Bordetella parapertussis]
gi|33568609|emb|CAE34367.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|332383713|gb|AEE68560.1| hypothetical protein BPTD_3371 [Bordetella pertussis CS]
gi|401779557|emb|CCJ65095.1| conserved hypothetical protein [Bordetella pertussis 18323]
gi|408441929|emb|CCJ48429.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
Length = 303
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 21/236 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G +L +L Q ++++P R + RDL++ L V +D E+
Sbjct: 5 VIGGTGFIGRHLVARLAAQEHKVLVPTR-RYNKGRDLQV---LPTVTLIEADVHDDAELD 60
Query: 83 KAIKYSNVVINLIGREFATKN----FTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + + V+NL+G + A A+V +P R+A+ GV + +H+SAL AD
Sbjct: 61 RLMHRCDAVVNLVGVLHGGRGRPYGAGFARAHVLLPERIAQACVRNGVARMLHVSALGAD 120
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEA---TIFRPSDMYGSGDKFLRYYGHMWRH 195
P+ Y+ R+K GE + R F T+FRPS ++G D F R + + R
Sbjct: 121 SGGPSMYL-------RSKGDGEAAIQRVFGATGGWTLFRPSVVFGPDDNFTRMFARLAR- 172
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+F L + G + QPVYVGDVA A++AA + AGKIY+ GP+ Y L E++
Sbjct: 173 LFPVLPL--AGARSRMQPVYVGDVADAMMAALANGHTAGKIYELCGPQVYTLGEIV 226
>gi|412341678|ref|YP_006970433.1| hypothetical protein BN112_4399 [Bordetella bronchiseptica 253]
gi|408771512|emb|CCJ56313.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
Length = 303
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 123/236 (52%), Gaps = 21/236 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G +L +L Q ++++P R + RDL++ L V +D E+
Sbjct: 5 VIGGTGFIGRHLVARLAAQEHKVLVPTR-RYNKGRDLQV---LPTVTLIEADVHDDAELD 60
Query: 83 KAIKYSNVVINLIGREFATKN----FTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + + V+NL+G ++ A A+V +P R+A+ GV + +H+SAL AD
Sbjct: 61 RLMHRCDAVVNLVGVLHGSRGRPYGAGFARAHVLLPERIAQACVRNGVARMLHVSALGAD 120
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEA---TIFRPSDMYGSGDKFLRYYGHMWRH 195
P+ Y+ R+K GE + R F T+FRPS ++G D F R + + R
Sbjct: 121 SGGPSMYL-------RSKGDGEAAIQRVFGATGGWTLFRPSVVFGPDDNFTRMFARLAR- 172
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+F L + G + QPVYVGDVA A++ A + AGKIY+ GP+ Y L E++
Sbjct: 173 LFPVLPL--AGARSRMQPVYVGDVADAMMVALANGHTAGKIYELCGPQVYTLGEIV 226
>gi|394989690|ref|ZP_10382523.1| hypothetical protein SCD_02116 [Sulfuricella denitrificans skB26]
gi|393791190|dbj|GAB72162.1| hypothetical protein SCD_02116 [Sulfuricella denitrificans skB26]
Length = 314
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 125/238 (52%), Gaps = 23/238 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G G++G ++ ++L +QG ++ +PYR N + L + + V + P E+
Sbjct: 7 CVLGGGGFVGQHVVSRLCEQGYEVRVPYR-NINRAKHLTVLPTVSLVEADIHDPV---EL 62
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+K ++ + V+NL+G K A+V++P ++ + GV++ +H+SA+ A
Sbjct: 63 KKMLQGMDAVVNLVGILHERKRGAFQRAHVDLPRKVVEACRATGVKRLLHMSAIGAS--- 119
Query: 142 PTYYISGGSQFYRTKYQGE---KEVLREFPEATIFRPSDMYGSGDKFLRYYGHM--WRHV 196
+ G S++ R+K +GE +E E T+FRPS ++G GD FL + + W V
Sbjct: 120 ----VDGLSRYQRSKGEGEALVREAHGEPLAVTVFRPSVIFGPGDSFLNLFAGLLNWTPV 175
Query: 197 FRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
F G + K QP+YVGDVA AIVA+ +P G+ Y GP Y L EL+++
Sbjct: 176 F------PLGSSSAKMQPIYVGDVAQAIVASVNNPATFGQSYDLCGPTVYTLQELVEY 227
>gi|422322814|ref|ZP_16403854.1| NADH dehydrogenase [Achromobacter xylosoxidans C54]
gi|317402224|gb|EFV82813.1| NADH dehydrogenase [Achromobacter xylosoxidans C54]
Length = 306
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 121/238 (50%), Gaps = 25/238 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G +L +L QI++P R + R+L++ L V +DD +
Sbjct: 5 VIGGTGFIGRHLIARLSGGQHQILVPTR-RYGQGRELQI---LPTVTLLASDVHDDDALD 60
Query: 83 KAIKYSNVVINLIGREFATKN----FTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + +VV+NL+G A A+V +P R+AR + GV + +H+SAL AD
Sbjct: 61 RLARDCDVVVNLVGILHGNAGRPYGSDFAQAHVHLPQRIARACRRQGVRRLLHVSALGAD 120
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEA-----TIFRPSDMYGSGDKFLRYYGHMW 193
N GGS + R+K GE + +E + T+FRPS ++G D F +M+
Sbjct: 121 SN-------GGSMYQRSKGDGEAAIRQELADWREGGWTMFRPSVVFGPDDNFT----NMF 169
Query: 194 RHVFRKLAVYK-KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ R L V G QPVYVGDV +A+++A + A GK Y+ GP+ Y L E+
Sbjct: 170 ARLARWLPVLPLAGAHARMQPVYVGDVVSAMLSALANTHACGKTYELGGPQVYTLGEI 227
>gi|126738417|ref|ZP_01754122.1| NADH ubiquinone oxidoreductase, putative [Roseobacter sp.
SK209-2-6]
gi|126720216|gb|EBA16922.1| NADH ubiquinone oxidoreductase, putative [Roseobacter sp.
SK209-2-6]
Length = 329
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 130/244 (53%), Gaps = 17/244 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K+G ++ + R + ++ G GQV + RND
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMHVKPYGVPGQVEPVLCNIRNDA 62
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A++ ++ V+N +G E FT V+ AR+AR++ + GV+ +HISAL A
Sbjct: 63 SVAAAMQGADAVVNCVGILNELGKNTFT--SVQVDGAARVARIAHKQGVDNLVHISALGA 120
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D G S++ R+K GE+ VL FP A I RPS ++GS D F + M +
Sbjct: 121 DAE-------GASEYARSKALGEEAVLGYFPSAVILRPSVIFGSEDGFFNRFAGM-ASLS 172
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL-DWFHV 256
L + K G T QPVYV DVA A V A + +AA IY+ GP+ S+LL D V
Sbjct: 173 PVLPIAKGG--TKFQPVYVDDVAKAAVKAIQG-EAASGIYELGGPEVKSFSDLLKDMLPV 229
Query: 257 VMKK 260
+ ++
Sbjct: 230 IHRR 233
>gi|389876041|ref|YP_006369606.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Tistrella mobilis
KA081020-065]
gi|388526825|gb|AFK52022.1| NADH-ubiquinone oxidoreductase 39 kDa subunit precursor [Tistrella
mobilis KA081020-065]
Length = 323
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 123/241 (51%), Gaps = 10/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G Y+ +L + G +I + R + L+ GD+GQ+ +
Sbjct: 8 LVTVFGGSGFLGRYVVARLARTGVRIRVAVR-DADRALFLKPAGDVGQIAIMSCDVTDAA 66
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
++R A+ ++ INL G T +V+ +A+ + + G+ +H+SA+ ADP
Sbjct: 67 QVRAALADASAAINLTGILAEGWGATFDGVHVQGAGNIAKAAADAGLGSLVHVSAIGADP 126
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ Y RTK GE V FP A I RPS ++G D F + M R +
Sbjct: 127 ESSSAY-------GRTKAAGEAAVREAFPTAVILRPSILFGPEDDFFNRFAGMTR-ISPA 178
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
L + G+ T QPV+V DVA A+V + +P+ AG+ ++ GPK Y +++L++ ++
Sbjct: 179 LPLIGGGQ-TRFQPVWVVDVAEAVVRSLDEPEFAGRTFELGGPKVYSFAQILEYILATVR 237
Query: 260 K 260
K
Sbjct: 238 K 238
>gi|407405938|gb|EKF30669.1| hypothetical protein MOQ_005519 [Trypanosoma cruzi marinkellei]
Length = 373
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 124/258 (48%), Gaps = 21/258 (8%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGD 64
+G G ++ GV FGA+G +G ++ + G I+P+R G VR LR+ GD
Sbjct: 19 RGGGSEANTMGVNVVTFGATGILGMHVHHLCCYHGFTSILPFRFRAGLASGVRTLRMAGD 78
Query: 65 --LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR-------EFATKNFTIADANVEIPA 115
+GQ Y + ++ ++ + VIN++G E + F++ NVE P
Sbjct: 79 GTVGQNFDTDYEIDKEFVVKSILEKVDNVINVVGAWQEPAVYENSQSWFSMEAINVEWPR 138
Query: 116 RLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRP 175
LAR +EMG+ + H+S + AD N P S+ R K + E VL EFP ATI R
Sbjct: 139 MLARWCREMGILRLTHMSMVGADLNSP-------SKLLRQKREAEIAVLEEFPTATIIRG 191
Query: 176 SDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGK 235
+D++ D Y ++ + K+ + I QPV+ GD+A A + G+
Sbjct: 192 TDIFSEND--FSYSKYLKAQRYLKIVPVPNRGQRIHQPVFAGDLAEAACRSLLLDHTEGR 249
Query: 236 IYQAVGPKRYLLSELLDW 253
I + GP R+ ++LL W
Sbjct: 250 IAELGGPVRFTTNDLLRW 267
>gi|393720747|ref|ZP_10340674.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingomonas
echinoides ATCC 14820]
Length = 310
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 123/246 (50%), Gaps = 22/246 (8%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQPYHPRND 78
T+ G G++G Y+ L +G+++ I R D R L+ G LGQ F
Sbjct: 7 TLIGGGGFLGRYVAQALLARGARVRIAQR----DPRQAFFLKPQGGLGQTQFVAADLLKP 62
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ I +A+ S+VV+NL+G +F VE +A +K GV +HISA+ AD
Sbjct: 63 ESIARAVAGSDVVVNLVG--ILAGDFQ--RIQVEGARIVAEAAKTAGVGHLVHISAIGAD 118
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P P+ Y R+K +GE V FP ATI RPS ++G D+F+ + M
Sbjct: 119 PASPSAY-------GRSKGEGEAAVRAAFPGATILRPSIVFGREDQFINRFAKMIASA-P 170
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD-AAGKIYQAVGPKRYLLSELLDWFHVV 257
+ V + G T QPVYVGDVA A+VAA + P A+GK ++ GP + L+ W
Sbjct: 171 IVPVLRAG--TKFQPVYVGDVADAVVAALEHPALASGKTFELGGPDVLSMGALVRWIAKA 228
Query: 258 MKKGEP 263
+++ P
Sbjct: 229 VRRTPP 234
>gi|357386452|ref|YP_004901176.1| NAD-dependent epimerase/dehydratase [Pelagibacterium halotolerans
B2]
gi|351595089|gb|AEQ53426.1| NAD-dependent epimerase/dehydratase [Pelagibacterium halotolerans
B2]
Length = 326
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 119/236 (50%), Gaps = 17/236 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR-DLRLCGDLGQVLFQPYHP--R 76
+AT+FG SG++G+ L L ++G + + R D+ +R+ G GQ+ QP R
Sbjct: 8 IATIFGGSGFIGTQLTQDLARRGYSVRVAVRRP--DLAGHVRMFGFPGQI--QPIQANLR 63
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + A++ S+VVINL+G F + +A ++ GV IH+SA+
Sbjct: 64 YPESVAAAVRGSDVVINLVGILFEKGKQRFRAVQTQGAKAVAEAARNAGVPTLIHMSAIG 123
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
ADP P+ Y R K GE EV + FP+A + RPS ++GS D F +G + R
Sbjct: 124 ADPQSPSAY-------QRAKALGEDEVFKAFPKAVVIRPSLVFGSEDGFFNLFGFVARM- 175
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G T QPVYV DVA AI A + GK+Y+ GP+ + ++++
Sbjct: 176 --SPIMPLIGRNTKFQPVYVADVAQAIALAAEGAVKTGKVYELGGPEIVTMEQVIE 229
>gi|365859001|ref|ZP_09398891.1| NAD dependent epimerase/dehydratase family protein
[Acetobacteraceae bacterium AT-5844]
gi|363713288|gb|EHL96924.1| NAD dependent epimerase/dehydratase family protein
[Acetobacteraceae bacterium AT-5844]
Length = 314
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 126/266 (47%), Gaps = 15/266 (5%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
VA VFG +G++G + +L + + + R N R L G +GQV+ R D
Sbjct: 6 VAVVFGGAGFIGRQVVQRLARLDYVVRVVGR-NPEAARPLMTQGLVGQVVPLAADLRQDA 64
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
I +A+ ++VV+NL+G +K + E+P R+ + GV + + ISA+ ADP
Sbjct: 65 VIGRAVAGADVVVNLVGILAESKAGDFQRLHGELPGRIGAAAAAAGVRRLVQISAIGADP 124
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
P+ Y R+K GE + FP+A I RPS ++G D F + M R +
Sbjct: 125 ASPSAY-------ARSKAAGEASLRAAFPQAVILRPSIVFGPEDHFFNRFAGMARMLPFM 177
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDWFH 255
V T QPVYVGDVA A++AA D G+ Y+ GP+ R L++ +LD
Sbjct: 178 PVVCGN---TRFQPVYVGDVADAVLAATSRADVEGQTYELGGPEVVSFRDLMAMILDITG 234
Query: 256 VVMKKGEPDYGYYRYDLRYDPVMPLK 281
+ E G R R +P K
Sbjct: 235 RRKRLVEIPDGLVRLQARLGEHLPGK 260
>gi|71661749|ref|XP_817891.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883110|gb|EAN96040.1| hypothetical protein, conserved [Trypanosoma cruzi]
gi|407862966|gb|EKG07801.1| hypothetical protein TCSYLVIO_001067 [Trypanosoma cruzi]
Length = 373
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 124/258 (48%), Gaps = 21/258 (8%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGD 64
+G G ++ GV FGA+G +G ++ + G I+P+R G VR LR+ GD
Sbjct: 19 RGGGSEANTMGVNVVTFGATGILGMHVHHLCCYHGFTSILPFRFRAGLASGVRVLRMAGD 78
Query: 65 --LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR-------EFATKNFTIADANVEIPA 115
+GQ Y + ++ ++ + VIN++G E + F++ NVE P
Sbjct: 79 GTVGQNFDTDYEIDKEFVVKSILEKVDNVINVVGAWQEPAVYENSQSWFSMEAINVEWPR 138
Query: 116 RLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRP 175
LAR +EMG+ + H+S + AD N P S+ R K + E VL EFP ATI R
Sbjct: 139 MLARWCREMGILRLTHMSMVGADLNSP-------SKLLRQKREAEIAVLEEFPTATIIRG 191
Query: 176 SDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGK 235
+D++ D Y ++ + K+ + I QPV+ GD+A A + G+
Sbjct: 192 TDIFSEND--FSYSKYLKAERYLKIVPVPNRGQRIHQPVFAGDLAEAACRSLLLDHTEGR 249
Query: 236 IYQAVGPKRYLLSELLDW 253
I + GP R+ ++LL W
Sbjct: 250 IAELGGPVRFTTNDLLRW 267
>gi|347761831|ref|YP_004869392.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Gluconacetobacter
xylinus NBRC 3288]
gi|347580801|dbj|BAK85022.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Gluconacetobacter
xylinus NBRC 3288]
Length = 314
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 11/234 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
VATVFG SG++G + +L + G + + R D +R+ GD+GQV+ ++
Sbjct: 22 VATVFGGSGFVGRSVVGRLARAGYVVRVAGR-TARDAACMRMQGDVGQVVPVVASITDEA 80
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
A++ ++ INL+G T +VE R+ARL+ GV + IH+SA+ A
Sbjct: 81 GCVAALEGCDLAINLVGILSPHGRTTFEAIHVEGAGRVARLAACAGVGRLIHVSAIGAAL 140
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ P+ Y R+K +GE V R PEA I RPS ++G F + M R +
Sbjct: 141 DSPSAY-------ARSKAEGECVVTRAMPEAVIIRPSLIFGVDGAFPAMFARMAR-LMPV 192
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ V+ G T QPV+VGDVA ++ AG +++ GPK + +++ W
Sbjct: 193 MPVF--GAATRFQPVWVGDVAEGMLRIATGESVAGAVFEFGGPKIMTMRQIVAW 244
>gi|99082660|ref|YP_614814.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ruegeria sp. TM1040]
gi|99038940|gb|ABF65552.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ruegeria sp. TM1040]
Length = 329
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 121/240 (50%), Gaps = 16/240 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K+G ++ + R + ++ G GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMHVKPYGVPGQVEPVFCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ + ++ V+N +G T + E R+AR++ + GVE+ +H+SA+ AD
Sbjct: 63 SVAAVMAGADAVVNCVGVLNEVGKNTFSAVQSEGAGRIARIAADTGVERLVHVSAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ G S + RTK +GE VL FP A I RPS ++G D+F + M R
Sbjct: 123 D-------GDSAYARTKAEGEAAVLEAFPSAMILRPSIIFGPEDQFFNRFASMTRF---G 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDWFH 255
+ G T QPVYV DVA A VA AAG Y+ GP+ L+S++LD H
Sbjct: 173 PVLPIAGGTTRFQPVYVDDVAKAAVAGLTGQAAAGT-YELGGPEVKSFTELMSQMLDVIH 231
>gi|296115077|ref|ZP_06833719.1| NADH dehydrogenase (ubiquinone) [Gluconacetobacter hansenii ATCC
23769]
gi|295978414|gb|EFG85150.1| NADH dehydrogenase (ubiquinone) [Gluconacetobacter hansenii ATCC
23769]
Length = 321
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 125/249 (50%), Gaps = 25/249 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
VATVFG +G++G Y+ +L + G + + R +RL GD+GQV+ +
Sbjct: 6 VATVFGGTGFVGRYVVARLARDGYVVRVASR-RPDRAAGMRLFGDVGQVVPLYASVLEER 64
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
AI+ S++V+NL+G ++ +V+ AR+ARL GV +H+SA+ ADP
Sbjct: 65 SSVAAIEGSDLVVNLVGILAPGRHAGFTAVHVDAAARVARLCASAGVGALVHMSAIGADP 124
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ G S + R+K +GE EV R EA I RPS ++G+ D F + M R+
Sbjct: 125 D-------GISDYGRSKGRGEVEVQRHMAEAVIVRPSIIFGAEDHFTNMFAAMARY-LPV 176
Query: 200 LAVYKKGEETIKQPVYVGDVAAAI-------------VAACKDPDA-AGKIYQAVGPKRY 245
+ VY G T QPV+V DVA AI V D AG I++ GP+ +
Sbjct: 177 MPVY--GGMTRFQPVHVADVAEAIRRIARGLGRGAGVVEGSSAEDIFAGSIFELGGPRVW 234
Query: 246 LLSELLDWF 254
+ +++ W
Sbjct: 235 RMQDMVRWI 243
>gi|407781897|ref|ZP_11129113.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Oceanibaculum
indicum P24]
gi|407206936|gb|EKE76880.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Oceanibaculum
indicum P24]
Length = 316
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 11/236 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
V TVFG SG++G Y+ +L K G ++ + R + + L+ G++GQ+ + +
Sbjct: 5 VVTVFGGSGFIGRYVVQRLAKTGVRVNVAVR-HVERAKFLKPMGNVGQITPISCDITDAE 63
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISALNAD 138
+ +A++ ++ V+NL+G + + + DA AR +A +K + ISA+ AD
Sbjct: 64 SVARAVQGADAVVNLVGILYPSGHGHGFDAVHHQAARTIAEAAKAADARALVQISAIGAD 123
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
S + R+K GE V FPEATI RPS ++G D F + M R
Sbjct: 124 AE-------SDSAYARSKAAGEAAVREVFPEATILRPSIVFGPEDGFFNRFAAMAR--LS 174
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
G T+ QPVYVGDVA A++ DP A GKIY+ GPK Y L++
Sbjct: 175 PALPLIGGGHTLFQPVYVGDVADAVLRVLSDPKAQGKIYELGGPKTYSFKALMELM 230
>gi|162147897|ref|YP_001602358.1| NAD-dependent epimerase/dehydratase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542514|ref|YP_002274743.1| NADH dehydrogenase (ubiquinone) [Gluconacetobacter diazotrophicus
PAl 5]
gi|161786474|emb|CAP56056.1| putative NAD-dependent epimerase/dehydratase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530191|gb|ACI50128.1| NADH dehydrogenase (ubiquinone) [Gluconacetobacter diazotrophicus
PAl 5]
Length = 307
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 11/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
VA V G SG++G Y+ +L + G ++ LR GD+GQ++ ++D
Sbjct: 6 VAAVIGGSGFLGRYVVRRLAEDG-YVVRVAARRADLAAALRPLGDVGQIVPLGASILDED 64
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ ++ + VV+NL+G T +V+ AR+ARL+ GV + +H+SA+ A P
Sbjct: 65 SLVPVVESAQVVVNLVGILAERGRATFQAVHVDGAARVARLAASAGVGRLLHVSAIGASP 124
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ + Y R+K GE+ VLR PEATI RPS ++G D+F + + R+
Sbjct: 125 DSRSAY-------GRSKAAGEEAVLRNMPEATIVRPSILFGPEDRFTNLFAALARY-SPV 176
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
+ VY G T QPVY DVA I +G+IY+ GP + + ++ W +
Sbjct: 177 MPVY--GAATRIQPVYAADVAEGIRRILAGEGHSGEIYEFGGPAIWTMEGVMRWIVATLG 234
Query: 260 K 260
+
Sbjct: 235 R 235
>gi|323137966|ref|ZP_08073040.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242]
gi|322396685|gb|EFX99212.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242]
Length = 335
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 143/300 (47%), Gaps = 29/300 (9%)
Query: 12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQV 68
G S G + TVFG SG++G ++ L + G ++ I R F+ L+ G +GQV
Sbjct: 3 GESVGAGRIVTVFGGSGFVGRHVVRALARDGWRVRIACRRPDLAFH----LQPLGRVGQV 58
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ + R + + A++ + V+NL+G T +D +A +K G++
Sbjct: 59 MAVQANVRKPESVAAALRGAEAVVNLVGILAETGAQKFSDVQAAGARAVAEAAKAAGIDN 118
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
+HISA+ ADP + Y R+K +GE + P A I RPS ++G D F
Sbjct: 119 VVHISAIGADPKSASAY-------GRSKAEGEAAMHAAVPTAVILRPSIIFGPEDDFFNR 171
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M R F + + G ET QPVYVGDVA A+ A AG IY+ GP+ +
Sbjct: 172 FATMARF-FPVIPIV--GAETRFQPVYVGDVAEAVATALAGRAKAGAIYELGGPEIKTFA 228
Query: 249 ELLDWFHVVMKKGEPDYGYYRYDLRYDPVMP------LKLFINGLFPGYPMGHLTPERVE 302
EL+D+ V+K E + G + ++ KL + GLFP + +T ++VE
Sbjct: 229 ELIDY---VLKVTERERGVAKLSFSTGKLVAGVTQTCTKLSL-GLFP--TLLRMTGDQVE 282
>gi|429769674|ref|ZP_19301773.1| NAD dependent epimerase/dehydratase family protein [Brevundimonas
diminuta 470-4]
gi|429186557|gb|EKY27496.1| NAD dependent epimerase/dehydratase family protein [Brevundimonas
diminuta 470-4]
Length = 323
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 119/235 (50%), Gaps = 14/235 (5%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G+ + L ++G ++ + R N L + GD+GQV + + +
Sbjct: 10 TVFGGSGFIGTQVVRALARRGWRVRVAAR-NAKSAPVLHMAGDVGQVQVVRCNITDKAAV 68
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ ++ VINL+G F T +VE +A + GV++ HISA+ AD N
Sbjct: 69 AQAVHGADAVINLVGILFETGGRKFQTLHVEGATNVAEAAAAAGVQRLTHISAIGADAN- 127
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM--WRHVFRK 199
G + + RTK + E V FP A I RPS ++GSGD+FL + M W V
Sbjct: 128 ------GKADYARTKGEAEAAVRAAFPGAVIVRPSIVFGSGDQFLNRFAAMATWSPVLPL 181
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ G +T QPVYV D A AI A P+A G+ Y+ GP + ++L +
Sbjct: 182 IG----GGQTKFQPVYVADAAEAIARATVAPEAGGETYELGGPSVWTFEDILKFI 232
>gi|349700002|ref|ZP_08901631.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Gluconacetobacter
europaeus LMG 18494]
Length = 297
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 11/234 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
VATVFG SG++G + +L + G + + R D LR+ GD+GQV+ ++
Sbjct: 5 VATVFGGSGFVGRSVVGRLARAGYVVRVAGR-TATDAATLRMLGDVGQVVSVVASITDEK 63
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
AI+ S++VINL+G T +VE AR+ARL+ GVE+ IH+SAL A
Sbjct: 64 ACVAAIEGSSLVINLVGILAPHGADTFTAIHVEGAARVARLAAASGVERLIHVSALGARA 123
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ + Y R+K +GE V R PEA I RPS ++G F + M R
Sbjct: 124 DSLSAY-------ARSKAEGECMVGRAMPEAVIIRPSLIFGVDGAFPAMFARMARF-LPV 175
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ V+ G T QPV+VGDVA ++ D AG I++ GP+ + +++ W
Sbjct: 176 MPVF--GATTRFQPVWVGDVADGMIRIATGADMAGAIFEFGGPQVLTMRQIVAW 227
>gi|77163645|ref|YP_342170.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
gi|254435912|ref|ZP_05049419.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Nitrosococcus
oceani AFC27]
gi|76881959|gb|ABA56640.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
gi|207089023|gb|EDZ66295.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Nitrosococcus
oceani AFC27]
Length = 308
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 119/231 (51%), Gaps = 14/231 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG +G++G + ++L + G ++ I R R L G GQ+ Q R++D +
Sbjct: 13 TVFGGTGFLGRAIVHRLVESGMRVRIVAR----HPRAPNLAGARGQIALQRADVRDEDSV 68
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+K + V+N +G T + E R+AR + E G+ + IHIS + DP
Sbjct: 69 AEALKGATGVVNAVGLYVEQGQATFRAIHEEGAERVARRAGEAGIRRLIHISGIGVDP-- 126
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
+ S++ R + GE+ V FP ATI RPS M+G D FL + R +
Sbjct: 127 -----ASASKYARARAYGEQRVREIFPNATILRPSVMFGPNDAFLNSLKTVTR--LPVVP 179
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
++ +G + QPVYV DVA A++ + P+A+GK ++ G + Y ++++
Sbjct: 180 LFGQGSTRL-QPVYVEDVARAVLQVLEMPEASGKTFELGGARAYRYRDIIE 229
>gi|209517334|ref|ZP_03266177.1| NADH dehydrogenase [Burkholderia sp. H160]
gi|209502217|gb|EEA02230.1| NADH dehydrogenase [Burkholderia sp. H160]
Length = 317
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 133/276 (48%), Gaps = 25/276 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G SG++GSYL N L + G + + R Y+ R L + + + ++
Sbjct: 7 AVIGGSGFIGSYLVNALVEMGKDVRLATR-RRYNARHLTML----PIDVLETDVSDPVQL 61
Query: 82 RKAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ ++ ++ V+NL+G R A A+VE+P R+ + GV + IH+SAL A
Sbjct: 62 ARFVEGADCVVNLVGILNGRRGKPYGQEFAHAHVELPTRIVAACEGKGVHRLIHLSALGA 121
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DPN P+ Y R+K GEK V TIFRPS ++G D FL + + R VF
Sbjct: 122 DPNGPSMY-------SRSKADGEKAVHAASVAWTIFRPSVVFGPEDAFLNKFAFLQR-VF 173
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
+ + + QPVYVGDVA AIV DA+G+ Y+ GP Y L +L+ + V
Sbjct: 174 PVIPLAMPDAQF--QPVYVGDVAKAIVNVLDLDDASGRTYELGGPTVYTLEDLVSYCGDV 231
Query: 258 MKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPM 293
+ K + R +P+ L+ + PG P+
Sbjct: 232 IGK------HARIIRLPEPLARLQALSFEMAPGEPV 261
>gi|84514712|ref|ZP_01002076.1| NADH ubiquinone oxidoreductase, putative [Loktanella vestfoldensis
SKA53]
gi|84511763|gb|EAQ08216.1| NADH ubiquinone oxidoreductase, putative [Loktanella vestfoldensis
SKA53]
Length = 326
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 119/239 (49%), Gaps = 12/239 (5%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T+FG SG++G Y+ ++ + G ++ + R N + +R G +GQV + R+D +
Sbjct: 6 TIFGGSGFVGRYIARRMAQNGWRVRVAVR-NTNEAMFVRTYGAVGQVEPVFCNIRDDASV 64
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
++ V+N +G + T A E R+AR++ EMGV + + ISA+ A
Sbjct: 65 AAVTHGADAVVNCVGVLAELRKNTFAAVQAEGATRIARIAAEMGVARMVQISAIGASDTS 124
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
+ Y RTK GE+ VL P+A I RPS ++G+ D+F + M R + L
Sbjct: 125 VSAY-------ARTKAAGEQGVLDHMPDAMILRPSIIFGAEDQFFNRFAGMTR-LGPVLP 176
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260
V G +T QPVYV DVAAA V + G IY+ GP EL+ V+++
Sbjct: 177 VI--GADTQFQPVYVDDVAAAAVKGVLG-EVPGGIYELGGPDVATFRELMQTMLAVVRR 232
>gi|167041252|gb|ABZ06008.1| putative 3-beta hydroxysteroid dehydrogenase/isomerase family
protein [uncultured marine microorganism HF4000_005D21]
gi|167045756|gb|ABZ10402.1| putative NAD dependent epimerase/dehydratase family protein
[uncultured marine bacterium HF4000_APKG3108]
Length = 313
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 121/236 (51%), Gaps = 11/236 (4%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR 76
N + +FGA G++G +L +L K ++ + R N Y L+ G+ GQ+ +
Sbjct: 4 NQKIIGIFGAGGFLGKHLMRQLTKLDYRVKVATR-NPYLKGYLKPLGNPGQIELFKTNIF 62
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
N +++++ +K ++ INL+G + T+ + + P L+ L E+G++K +H+SAL
Sbjct: 63 NPEDVKQVLKNCDLAINLVGILYETRKQKFNQIHAQFPNLLSELCNELGIKKLVHVSALG 122
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
P SQ+ ++K QGEK + F ++ I RP M+G DKF + + +
Sbjct: 123 VKEGHP-------SQYMQSKLQGEKNIQDTFKQSVILRPGIMFGPEDKFFNTFATLAQ-- 173
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
F G +T+ +P+YVGDVA IV + + ++ IY+ +G Y EL+
Sbjct: 174 FSPALPLIGGGKTVFEPIYVGDVAQTIVKSLELNNSKSSIYE-LGGANYSFKELMQ 228
>gi|354594189|ref|ZP_09012232.1| hypothetical protein CIN_09280 [Commensalibacter intestini A911]
gi|353673300|gb|EHD14996.1| hypothetical protein CIN_09280 [Commensalibacter intestini A911]
Length = 323
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 117/237 (49%), Gaps = 15/237 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN 77
VATV G + ++ Y+ +L K G ++ +P V LR G++G +
Sbjct: 7 VATVIGNNKFVEGYVVERLVKAGYVVRVAVPQPA---LVNTLRPFGNVGHISPLYCSVTQ 63
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ + +AI+ + VV+NL F + NV+ +AR+S GV+K IH SAL A
Sbjct: 64 EHTVIRAIEGAEVVVNLSELSFGKNKTKLDIYNVKAAQNIARISAAAGVKKLIHFSALGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
+ N + Y+ +K +GE VL F A I R S ++G D+FL G M F
Sbjct: 124 ELNSRSAYLV-------SKKKGEDAVLEAFSSAVILRTSIVFGPEDQFLNKLG-MIASYF 175
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ VY T QPVYVGDVA A++ + P+ AGKIY+ G + Y EL+ W
Sbjct: 176 PIMPVYNVN--TKLQPVYVGDVADAVMKVVQQPETAGKIYELAGQEAYTNRELMTWL 230
>gi|294010230|ref|YP_003543690.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
japonicum UT26S]
gi|292673560|dbj|BAI95078.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
japonicum UT26S]
Length = 312
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 122/234 (52%), Gaps = 16/234 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG G++G ++ L +G+++ + R + ++ G LGQ F R + +
Sbjct: 11 TVFGGGGFLGRHVAQALMARGARVRVAQR-DLATALRVKPLGALGQTQFVAADIRKPESV 69
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ S++VINL+G + +F ++ + A +A+ + E GV +HISA+ AD
Sbjct: 70 ARAVAGSDIVINLVG--VLSSDFQ--GSHHDGAANVAKAAAEAGVGALVHISAIGADAQS 125
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P+ Y R+K GE+ V FP ATI RPS ++G D+FL + + R F +
Sbjct: 126 PSAY-------GRSKAAGEEAVKAAFPSATIIRPSIVFGPEDQFLNRFAEIIR--FTPV- 175
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWF 254
V G T QPVYV DVA AI A ++P GK Y+ GP+ Y + EL W
Sbjct: 176 VPVIGANTRFQPVYVADVAQAIANAAENPGLHGGKTYELGGPQTYSMLELNAWI 229
>gi|71746242|ref|XP_827678.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831843|gb|EAN77348.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 373
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 23/259 (8%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGD 64
+G G ++ GV FGA+G +G+++ + G I+P+R G VR LR+ GD
Sbjct: 19 RGGGSEANAMGVNVATFGATGVLGTHIHHLCCYHGFTSIVPFRFRAGMASGVRHLRMAGD 78
Query: 65 --LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR-------EFATKNFTIADANVEIPA 115
+GQ Y + ++ ++ + VIN +G E + F++ NVE P
Sbjct: 79 GTVGQNFDTDYEIDKEFVVKSILEKVDNVINAVGAWQEPAVYENSQSWFSMEAINVEWPR 138
Query: 116 RLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRP 175
LAR +EMG+ + H+S + AD + P S+ R K E VL EFP ATI R
Sbjct: 139 MLARWCREMGILRLTHMSMVGADLHSP-------SKLLRQKRAAEIAVLEEFPTATIIRG 191
Query: 176 SDMYGSGD-KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG 234
+D++ D + RY M + ++ + + +G+ I QPV+ GD+A A + G
Sbjct: 192 TDIFAENDYSYSRYL--MAQRKYKIVPMPNRGQR-IHQPVFAGDLAEATCRSILLDHTEG 248
Query: 235 KIYQAVGPKRYLLSELLDW 253
+I + GP R+ ++ L W
Sbjct: 249 RIAELGGPVRFTTADYLRW 267
>gi|407784781|ref|ZP_11131930.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Celeribacter
baekdonensis B30]
gi|407204483|gb|EKE74464.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Celeribacter
baekdonensis B30]
Length = 327
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 125/244 (51%), Gaps = 18/244 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPYHPR 76
+ T++G +G++G Y+ ++ K+G ++ + R + Y ++ G +GQV + R
Sbjct: 4 LVTIYGGAGFVGRYIARRMAKEGWRVRVAVRRPNESLY----VKPYGAVGQVEPIFCNIR 59
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+D +R A+ ++ V+N +G + A + R+AR++ E VE+ +H+SA+
Sbjct: 60 DDASVRAAMAGADAVVNCVGVLTERGKNSFAAIQTDGAGRIARIAAEQAVEQLVHVSAIG 119
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD + Y RTK +GE +VL FP+A I RPS ++G+ D+F +G M
Sbjct: 120 ADMQSDSVY-------SRTKAEGEAKVLAAFPKAVILRPSVIFGTEDEFFNRFGKMAE-- 170
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
+ + + G T QPVYV DVA A V A AG +Y+ GP L L+ V
Sbjct: 171 -KSVVLPLVGGNTKFQPVYVDDVAQAAVKAVLGQADAG-VYELGGPDVDTLKGLMGEMLV 228
Query: 257 VMKK 260
V+ +
Sbjct: 229 VLHR 232
>gi|402819924|ref|ZP_10869491.1| hypothetical protein IMCC14465_07250 [alpha proteobacterium
IMCC14465]
gi|402510667|gb|EJW20929.1| hypothetical protein IMCC14465_07250 [alpha proteobacterium
IMCC14465]
Length = 313
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 112/233 (48%), Gaps = 10/233 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
V TVFG SG++G ++ L K+G ++ + R + L+ G +GQV + R++
Sbjct: 11 VVTVFGGSGFLGRHIVRALVKRGWRVRVAVR-RPNEALFLKTAGAVGQVAIMQANIRDEA 69
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+RKA+K + VINL+G + + + + +A + GV+KF+ +SA+ A
Sbjct: 70 SVRKAVKGVDAVINLVGILYESGKQKFSAVQADGARTVADAAASEGVQKFVQLSAIGAS- 128
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ + R+K GE VL P+A I RPS + G D F + M
Sbjct: 129 ------FESDAAYARSKAAGEAAVLEAIPQAVILRPSIVIGPEDDFFNRFAKM--ATLAP 180
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
G ET+ QPV V DVA A+ A +D D GK Y+ GP + L++
Sbjct: 181 ALPLVGGGETLYQPVAVQDVAQAVCATLEDKDCGGKTYELGGPDIFSFKNLME 233
>gi|115389976|ref|XP_001212493.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor [Aspergillus terreus NIH2624]
gi|114194889|gb|EAU36589.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor [Aspergillus terreus NIH2624]
Length = 293
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 17/198 (8%)
Query: 57 RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR 116
R L+ GDLG+V F Y RN I +++++S+VV NL+GR++ TKNF+ D +V+ R
Sbjct: 4 RHLKPTGDLGRVNFIEYDLRNTQSIEESVRHSDVVYNLVGRQYPTKNFSYTDVHVDGIER 63
Query: 117 LARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPS 176
+ + V+++IH+S+ NA+ + P S+++ TK GE+ +PE TI RP+
Sbjct: 64 IVEAVAKYDVDRYIHVSSYNANRDSP-------SEYFATKGWGEEVARSIYPETTIVRPA 116
Query: 177 DMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQ--PVYVGDVAAAIVAACKDPDAAG 234
M+G D L H K+ ++ PV+V DV AA+ D AG
Sbjct: 117 PMFGFEDNLL--------HKLAKVTNLFTANHMQERYWPVHVNDVGAALERMLHDDTTAG 168
Query: 235 KIYQAVGPKRYLLSELLD 252
+ ++ GPK Y +E+ +
Sbjct: 169 ETFELYGPKNYSTAEIAE 186
>gi|300112818|ref|YP_003759393.1| NAD-dependent epimerase/dehydratase [Nitrosococcus watsonii C-113]
gi|299538755|gb|ADJ27072.1| NAD-dependent epimerase/dehydratase [Nitrosococcus watsonii C-113]
Length = 308
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 14/226 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG +G++GS + +L + G ++ I R R L L GQ+ Q R++D
Sbjct: 11 LVTVFGGTGFLGSTIVQRLVESGMRVRIAAR----HPRALDLAEARGQIALQRADVRDED 66
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +A+K + V+N +G T + E R+AR + E G+ + IHIS + DP
Sbjct: 67 SVAEALKGATGVVNAVGLYVEQGQATFRAIHEEGAERVARRAGEAGIRRLIHISGIGVDP 126
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S + R + GE+ V FP AT+ RPS ++G D FL + R
Sbjct: 127 -------ASASNYVRARAYGEQRVREVFPNATLLRPSVLFGPNDAFLNSLKTVTR--LPI 177
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
+ ++ +G + QPVYV DVA A++ + PD G+ ++ G + Y
Sbjct: 178 VPLFGRGSTRL-QPVYVEDVARAVLQVLEMPDTNGRTFELGGARAY 222
>gi|261331883|emb|CBH14877.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 373
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 23/259 (8%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGD 64
+G G ++ GV FGA+G +G+++ + G I+P+R G VR LR+ GD
Sbjct: 19 RGGGSEANAMGVNVATFGATGVLGTHIHHLCCYHGFTSIVPFRFRAGMASGVRHLRMAGD 78
Query: 65 --LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR-------EFATKNFTIADANVEIPA 115
+GQ Y + ++ ++ + VIN +G E + F++ NVE P
Sbjct: 79 GTVGQNFDTDYEIDKEFVVKSILEKVDNVINAVGAWQEPAVYENSQSWFSMEAINVEWPR 138
Query: 116 RLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRP 175
LAR +EMG+ + H+S + AD + P S+ R K E VL EFP ATI R
Sbjct: 139 MLARWCREMGILRLTHMSMVGADLHSP-------SKLLRQKRAAEIAVLEEFPTATIIRG 191
Query: 176 SDMYGSGD-KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG 234
+D++ D + RY M + ++ + + +G+ I QPV+ GD+A A + G
Sbjct: 192 TDIFAENDYSYSRYL--MAQRKYKIVPMPNRGQR-IHQPVFAGDLAEAACRSILLDHTEG 248
Query: 235 KIYQAVGPKRYLLSELLDW 253
+I + GP R+ ++ L W
Sbjct: 249 RIAELGGPVRFTTADYLRW 267
>gi|401429430|ref|XP_003879197.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495447|emb|CBZ30751.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 369
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 21/255 (8%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGD--L 65
G ++ GV FGA+G +G ++ G I+P+R G VR +R GD +
Sbjct: 18 GAEANTMGVNVVTFGATGILGHHIHAVNCYHGYTSILPFRFRSGMPSSVRQMRSSGDGTV 77
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR-------EFATKNFTIADANVEIPARLA 118
GQ Y + ++ ++ + VIN++G E + F++ NVE P LA
Sbjct: 78 GQNFDTDYEIDKEFVVKAILEKVDNVINVVGAWQEPACYENSQSWFSMEAINVEWPRMLA 137
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
R +EMG+ K H+S + AD N P S+ R K + E VL EFP ATI R +D+
Sbjct: 138 RWCREMGILKLTHMSMVGADLNSP-------SKLLRQKREAEIAVLEEFPTATIIRGTDI 190
Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
+ D Y ++ + K+ + I QPV+ GD+A A + G+I +
Sbjct: 191 FAEND--FSYSKYLKAQRYMKIVPVPNHGQRIHQPVFAGDLAEAAARSLLLDHTEGRIAE 248
Query: 239 AVGPKRYLLSELLDW 253
GP R+ ++LL W
Sbjct: 249 LGGPVRFTTNDLLRW 263
>gi|71909743|ref|YP_287330.1| NAD-dependent epimerase/dehydratase [Dechloromonas aromatica RCB]
gi|71849364|gb|AAZ48860.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid
dehydrogenase/isomerase:dTDP-4-dehydrorhamnose
reductase:NmrA-like protein [Dechloromonas aromatica
RCB]
Length = 320
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 128/247 (51%), Gaps = 39/247 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP--YHPRNDDE 80
+ G SG++G+Y+ N+L ++G ++ +P R R R ++ QP P D
Sbjct: 8 LLGGSGFVGTYIVNRLSQRGIEVTVPTR------RRERT----KALIMQPGVEMPEADIS 57
Query: 81 IRKAI----KYSNVVINLIG----REFA---TKNFTIADANVEIPARLARLSKEMGVEKF 129
K + + + VINL+G R+ +++F A+ +VE+P ++ K GV +
Sbjct: 58 CEKTLTELMRGHDAVINLVGVLHSRDVVLPYSRDF--AETHVELPKKIIAACKASGVRRL 115
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPE--ATIFRPSDMYGSGDKFLR 187
+H+SAL+ADP P S++ R+K GE V+ E T+FRPS ++G GD FL
Sbjct: 116 VHMSALHADPKGP-------SEYLRSKGDGEALVMAAQGELDVTVFRPSVIFGLGDSFL- 167
Query: 188 YYGHMWRHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
M+ V +KL + G + QPV+ DVA A V + D G+ Y+ VGPK Y
Sbjct: 168 ---SMFASVLKKLPFFPLGFGHARFQPVWAADVADAFVESLGDSATYGQAYELVGPKIYT 224
Query: 247 LSELLDW 253
L EL+D+
Sbjct: 225 LRELVDY 231
>gi|423015914|ref|ZP_17006635.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
xylosoxidans AXX-A]
gi|338780973|gb|EGP45369.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
xylosoxidans AXX-A]
Length = 306
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 25/238 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G +L +L QI++P R + R+L+L L V +DD +
Sbjct: 5 VIGGTGFIGRHLIARLAGGQHQILVPTR-RYGQGRELQL---LPTVTLLASDVHDDDALD 60
Query: 83 KAIKYSNVVINLIGREFATKN----FTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
++ + V+NL+G A A+V +P R+AR + +GV + +H+SAL AD
Sbjct: 61 HLVRGCDAVVNLVGILHGNSGRPYGSDFARAHVHLPQRIARACRRLGVRRLLHVSALGAD 120
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPE-----ATIFRPSDMYGSGDKFLRYYGHMW 193
SG S + R+K GE + +E + TIFRPS ++G+ D F + +
Sbjct: 121 S-------SGASMYQRSKGDGEAAIKQELADWREGGWTIFRPSVVFGADDNFTNMFARLA 173
Query: 194 RHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
R + LA G QPV+VGDV A++A + GK Y+ GP+ Y L E+
Sbjct: 174 RWLPLLPLA----GAHVRMQPVFVGDVVTAMLATLGNTHTWGKTYELGGPQVYTLGEI 227
>gi|384263591|ref|YP_005418780.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Rhodospirillum
photometricum DSM 122]
gi|378404694|emb|CCG09810.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Rhodospirillum
photometricum DSM 122]
Length = 321
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 15/244 (6%)
Query: 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH 74
S +G V TVFG +G++G L L G+++ + R + V L++ GDLGQ+
Sbjct: 2 SMHGRVVTVFGGTGFIGRPLVGALAAHGARVRVAVR-DVERVSPLKILGDLGQIAPITAS 60
Query: 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
+ D + +A++ ++ V+NL+G + T +VE +AR + + GV +H+SA
Sbjct: 61 LTHPDSVHRAVEGADAVVNLVGILSESGRQTFQSVHVEGARTVARAAAQAGVGTLVHMSA 120
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L A + P Y ++K GE V P+A I RPS ++G D+F + R
Sbjct: 121 LGACADSPARY-------AQSKAAGEAAVREAVPQAAIVRPSVVFGPDDRFFNLFASFTR 173
Query: 195 HVFRKLAVYKKGEETIK----QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
F + Y ++ QPV+VGDV AI + P G+ ++ GP+ Y + E+
Sbjct: 174 --FSPVLPYFDRGGSLGSPRFQPVFVGDVVQAITTLVETPR-PGETFELGGPQVYSMREI 230
Query: 251 LDWF 254
++
Sbjct: 231 MELI 234
>gi|300023845|ref|YP_003756456.1| NAD-dependent epimerase/dehydratase [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525666|gb|ADJ24135.1| NAD-dependent epimerase/dehydratase [Hyphomicrobium denitrificans
ATCC 51888]
Length = 324
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 120/237 (50%), Gaps = 12/237 (5%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-LRLCGDLGQVLFQPYHP 75
G +ATVFG SG++G + L ++ ++ R D+ L+ G +GQV +
Sbjct: 4 TGKLATVFGGSGFVGRQIVWSLARRDYRVRAAVRRP--DLAGYLQPMGVVGQVFGVQANL 61
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R D + +A++ + V+N +G T T D +VE R+A+ ++E G ++ +HISA+
Sbjct: 62 RFADSVMRAVEGAETVVNSVGILAPTGAQTFQDVHVEGARRIAKAAREAGAQRLVHISAI 121
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
A+ N S++ +K +GE VL EFP A I RPS ++G D+F + + R
Sbjct: 122 GANKN-------SNSKYAVSKAEGEAAVLAEFPSAIILRPSIVFGPEDQFFNRFAALAR- 173
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G T QPV+ GDV A+ A AG++Y+ GP+ E+L+
Sbjct: 174 -VSPVLPLVGGGRTKFQPVFSGDVGEAVANAVTGSGKAGEVYELGGPQVVTFREILE 229
>gi|259417212|ref|ZP_05741131.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Silicibacter sp.
TrichCH4B]
gi|259346118|gb|EEW57932.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Silicibacter sp.
TrichCH4B]
Length = 329
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 23/291 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K+G ++ + R + ++ G GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMHVKPYGVPGQVEPVFCNIRDDS 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ + S+ V+N +G T + E R+AR++ + GVE+ +H+SA+ AD
Sbjct: 63 SVAAVMAGSDAVVNCVGVLNEIGKNTFSAVQSEGAGRIARIAADTGVERLVHVSAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
G S++ RTK GE VL FP A I RPS ++G+ D+F + M R F
Sbjct: 123 E-------GASEYARTKAAGEAAVLEAFPGAMILRPSIIFGAEDQFFNRFAGMTR--FGP 173
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDWFH 255
+ + G T QPVYV DVA A VA A G Y+ GP+ L++++L+ H
Sbjct: 174 I-LPIAGGATRFQPVYVDDVAKAAVAGLTGSAAPGT-YELGGPEVKSFADLMAQMLNVIH 231
Query: 256 -----VVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERV 301
V + + +DL LF NGL + +L + V
Sbjct: 232 RRRIVVSLPNFVARIMAFGFDLAQSAT--FGLFTNGLLTRDQLKNLNSDNV 280
>gi|311104198|ref|YP_003977051.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
xylosoxidans A8]
gi|310758887|gb|ADP14336.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
xylosoxidans A8]
Length = 302
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 115/237 (48%), Gaps = 23/237 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G +L +L QI++P R + RDL++ L V +D +
Sbjct: 5 VIGGTGFIGRHLVARLSADQHQIVVPTR-LYSRGRDLQI---LPTVTLLECDVHDDATLD 60
Query: 83 KAIKYSNVVINLIGREFATKN----FTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + V+NL+G A A+V +P R+A+ + GV + +H+SAL AD
Sbjct: 61 SLAQGCDAVVNLVGILHGNAGRPYGSAFARAHVLLPQRIAQACRRQGVRRLLHVSALGAD 120
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEA-----TIFRPSDMYGSGDKFLRYYGHMW 193
N G S + R+K GE + +E TIFRPS ++G DKF + +
Sbjct: 121 SN-------GDSMYQRSKGDGEAAIKQELQGWQDGGWTIFRPSVVFGPDDKFTNMFAGLA 173
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
R + A+ G QPVYVGDV AAIV+A + GK Y+ GP+ Y L E+
Sbjct: 174 RWLP---ALPLAGAHVRMQPVYVGDVVAAIVSALGNTHTCGKTYELGGPQVYTLGEI 227
>gi|114327366|ref|YP_744523.1| NADH-ubiquinone oxidoreductase 39-40 kDa subunit-like protein
[Granulibacter bethesdensis CGDNIH1]
gi|114315540|gb|ABI61600.1| NADH-ubiquinone oxidoreductase 39-40 kDa subunit-like protein
[Granulibacter bethesdensis CGDNIH1]
Length = 333
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 14/211 (6%)
Query: 13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP 72
+S+ G +ATVFG SG++G L L ++G Q+ +P R + V L+ G +GQ++
Sbjct: 11 QSTMAGRIATVFGGSGFLGQSLIRLLAREGYQVRVPVR-DPEQVLKLKSAGSVGQIVPLG 69
Query: 73 YHPRNDDE---IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129
+ D I +A++ +++V+NL+G + +V+ +A LS + GV F
Sbjct: 70 VSLGSRDAEAGIARAVQGASLVVNLVGLLAEARKGDFQRVHVQAAGLIASLSAQAGVLSF 129
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
+HISAL ADP P+ Y R+K +GE+ V P+A I RPS ++G+ D F +
Sbjct: 130 MHISALGADPASPSAY-------GRSKAEGEEAVRSAVPQAAILRPSVVFGAEDHFFNRF 182
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVA 220
M + +Y QPVYV DVA
Sbjct: 183 AAMAVSLPVVPVIYGNSR---MQPVYVEDVA 210
>gi|358639312|dbj|BAL26609.1| NAD-dependent epimerase/dehydratase [Azoarcus sp. KH32C]
Length = 321
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 142/302 (47%), Gaps = 36/302 (11%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G SG++G + N+L + +I+P R + RDL L + +V+ H ++ +
Sbjct: 7 VLIGGSGFVGRAVANRLTEANIDVIVPTR-HAARARDLTLLPTV-EVVQADVH--DEATL 62
Query: 82 RKAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
R + V+NL+G R + A A+VE+P ++ M V + +HISAL A
Sbjct: 63 RSLFDGVDAVVNLVGILHSRSGSPYGPDFARAHVELPRKIVAACGAMSVPRLVHISALGA 122
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLR--EFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
P +G S++ R+K GE + P T+ RPS ++G D FL + +
Sbjct: 123 SP-------TGPSEYLRSKAAGEDAIRSAGHAPAWTVLRPSVIFGREDHFLNLFAQL--- 172
Query: 196 VFRKLAVYK-KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
KL V G T+ QPVYVGDVA + DP +AG+ Y+ GP + L EL+++
Sbjct: 173 -ACKLPVLPLAGAHTLFQPVYVGDVAEVVWRCLADPSSAGQTYELAGPTVHALHELVEYV 231
Query: 255 H-------VVMKKGEPDYGYYR--YDLRYDPVMP----LKLFINGLFPGYPMGH-LTPER 300
+V+ + EP +L +P+M L I+ + G P+ LTP
Sbjct: 232 AALAGCRVLVVPQPEPLAMLQARLMELSPNPIMSRDNVRSLRIDSVASGAPLPFGLTPSS 291
Query: 301 VE 302
VE
Sbjct: 292 VE 293
>gi|389594743|ref|XP_003722594.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|323363822|emb|CBZ12828.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 369
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 21/255 (8%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGD--L 65
G ++ GV FGA+G +G ++ G I+P+R G VR +R GD +
Sbjct: 18 GAEANTMGVNVATFGATGILGHHIHAVNCYHGYTSILPFRFRSGMPSSVRQMRSSGDGTV 77
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR-------EFATKNFTIADANVEIPARLA 118
GQ Y + ++ ++ + V+N++G E + F++ NVE P LA
Sbjct: 78 GQNFDTDYEVDKEFVVKAILEKVDNVVNVVGAWQEPACYENSQSWFSMEAINVEWPRMLA 137
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
R +EMG+ K H+S + AD N P S+ R K + E VL EFP ATI R +D+
Sbjct: 138 RWCREMGILKLTHMSMVGADLNSP-------SKLLRQKREAEIAVLEEFPTATIIRGTDI 190
Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
+ D Y ++ + K+ + I QPV+ GD+A A + G+I +
Sbjct: 191 FAEND--FSYSKYLKAQRYLKIVPVPNRGQRIHQPVFAGDLAEAAARSLLLDHTEGRIAE 248
Query: 239 AVGPKRYLLSELLDW 253
GP R+ ++LL W
Sbjct: 249 LGGPMRFTTNDLLRW 263
>gi|329115659|ref|ZP_08244381.1| NAD-Dependent Epimerase/Dehydratase [Acetobacter pomorum DM001]
gi|326695087|gb|EGE46806.1| NAD-Dependent Epimerase/Dehydratase [Acetobacter pomorum DM001]
Length = 317
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 15/248 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR--N 77
+ATV G G++G Y+ L + G ++ + R R LR G +GQ+ P++ +
Sbjct: 6 IATVLGGGGFVGRYVVQNLARAGYEVRVASRRPDLTAR-LRTLGYVGQI--APFYASVLD 62
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
D + A++ ++VVINL+ + K T+ NVE R+AR++ E V F+ +SAL A
Sbjct: 63 DASVACAVQGADVVINLVAVLSSVKQQTLQAVNVEGAGRVARIAAETDVPVFVQMSALGA 122
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
+ Y R++ GEK V + P+A I RPS ++G D F + + R+
Sbjct: 123 SETALSAY-------GRSRAAGEKVVRQYRPDAVIIRPSVIFGPEDHFFNMFAGLARY-L 174
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
L VY G + QPVY GDVA A++ A + AGK GP+ + ++ + V
Sbjct: 175 PCLPVY--GAHSRLQPVYAGDVAQAVLVAAQSSAFAGKELLLGGPQEMTMLDIARFVLRV 232
Query: 258 MKKGEPDY 265
++ +P +
Sbjct: 233 TQRHKPVF 240
>gi|254488150|ref|ZP_05101355.1| NADH-ubiquinone oxidoreductase [Roseobacter sp. GAI101]
gi|214045019|gb|EEB85657.1| NADH-ubiquinone oxidoreductase [Roseobacter sp. GAI101]
Length = 327
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 120/240 (50%), Gaps = 16/240 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K G ++ + R + +R G +GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKAGWRVRVAVR-RPNEAIFVRPYGAVGQVEPVFCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R A+ ++ V+N +G T T + R+AR++ E GV + ISA+ AD
Sbjct: 63 SVRAALLGADAVVNCVGILAETGKSTFEAIQADGAERIARIAAEEGVSHMVQISAIGADG 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S++ +TK GE VLR P+A I RPS ++G D+F + M R
Sbjct: 123 D-------AASEYAQTKAMGEAGVLRHMPDAVILRPSIIFGPEDEFFNRFAGMTRL---S 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDWFH 255
AV G +T+ QPVYV DVA A A DAA IY+ GP R L+ +L H
Sbjct: 173 PAVPVIGADTLFQPVYVDDVARAAEMAVVG-DAAPGIYELGGPDVESFRALMQRMLGAIH 231
>gi|146101072|ref|XP_001469019.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398023241|ref|XP_003864782.1| hypothetical protein, conserved [Leishmania donovani]
gi|134073388|emb|CAM72116.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322503018|emb|CBZ38102.1| hypothetical protein, conserved [Leishmania donovani]
Length = 369
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 21/255 (8%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGD--L 65
G ++ GV FGA+G +G ++ G I+P+R G VR +R GD +
Sbjct: 18 GAEANTMGVNVATFGATGILGHHIHAVNCYHGYTSILPFRFRSGMPSSVRQMRSSGDGTV 77
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR-------EFATKNFTIADANVEIPARLA 118
GQ Y + ++ ++ + V+N++G E + F++ NVE P LA
Sbjct: 78 GQNFDTDYEIDKEFVVKAILEKVDNVVNVVGAWQEPACYENSQSWFSMEAINVEWPRMLA 137
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
R +EMG+ K H+S + AD N P S+ R K + E VL EFP ATI R +D+
Sbjct: 138 RWCREMGILKLTHMSMVGADLNSP-------SKLLRQKREAEIAVLEEFPTATIIRGTDI 190
Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
+ D Y ++ + K+ + I QPV+ GD+A A + G+I +
Sbjct: 191 FAEND--FSYSKYLKAQRYMKIVPVPNRGQRIHQPVFAGDLAEAAARSLLLDHTEGRIAE 248
Query: 239 AVGPKRYLLSELLDW 253
GP R+ ++LL W
Sbjct: 249 LGGPVRFTTNDLLRW 263
>gi|260577299|ref|ZP_05845272.1| NADH dehydrogenase [Rhodobacter sp. SW2]
gi|259020480|gb|EEW23803.1| NADH dehydrogenase [Rhodobacter sp. SW2]
Length = 342
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 12/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G Y+ ++ +QG ++ + R + D +R GD+GQV + R+D
Sbjct: 18 LVTIFGGSGFVGRYIARRMAQQGWRVRVAVR-HPNDALFVRPYGDVGQVEPVACNIRDDA 76
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R ++ ++ V+N +G T + R+AR++ E GV +H+SA+ AD
Sbjct: 77 SVRAVMQGADAVVNCVGILNPDGRNTFFAVQSDGAGRIARIATEFGVANLVHLSAIGADA 136
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N P+ Y ++K GE VL+ FP A I RPS ++G D+F + M + +
Sbjct: 137 NSPSIY-------AKSKAAGEAAVLKAFPNAVILRPSVIFGPEDQFFNRFASMAK-IGPV 188
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
L + G T QPVYV DVA A A + A G IY+ GP S L+ V++
Sbjct: 189 LPLV--GANTRFQPVYVDDVAQAAALAAQGLAAPG-IYELGGPDVATFSALMQQMLAVIQ 245
Query: 260 K 260
+
Sbjct: 246 R 246
>gi|291334143|gb|ADD93813.1| NADH ubiquinone oxidoreductase 40 kDa subunit [uncultured marine
bacterium MedDCM-OCT-S05-C362]
Length = 280
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 12/256 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
V V G +G++G + +L K+G ++ + R + + LR GD+GQV + N D
Sbjct: 5 VVAVVGGAGFVGRNVVRELCKKGVRVNVGCR-DTESAKFLRSMGDVGQVNLIKVNVANYD 63
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
++ + I+ ++ VI+L+G TK T + P + ++++E V +H+SA+ AD
Sbjct: 64 QMARLIEGADYVISLVGILHETKGNTFETVQAKGPMLVGKIAREKNVRSLVHVSAIGADV 123
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N + Y S +K GE + EF + I RPS ++G D F + ++ F
Sbjct: 124 NSKSLYAS-------SKGLGESYIRDEFEKTVILRPSIIFGPDDNFFNRFANLA--AFAP 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF--HVV 257
G T QPVYV DVA+AI+ +D G Y+ GP Y ELL+ H +
Sbjct: 175 FLPLIGGGTTKFQPVYVQDVASAIMVVLEDSAKVGNDYELGGPSIYSFKELLELLEKHTL 234
Query: 258 MKKGEPDYGYYRYDLR 273
K+ + ++ L+
Sbjct: 235 RKRALVNIPFFLASLQ 250
>gi|294084810|ref|YP_003551570.1| NAD-dependent epimerase/dehydratase [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664385|gb|ADE39486.1| NAD-dependent epimerase/dehydratase [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 326
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 116/236 (49%), Gaps = 16/236 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TV G SG++G L + ++I+ R N + L+ GD+GQ+ ND+ +
Sbjct: 17 TVIGGSGFIGRATVEMLARAKMRVIVLCR-NAERAKYLKPMGDVGQITLVSGDALNDETL 75
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
IK ++ VIN +G T + E+P ++ L+++ V +HISA+ AD +
Sbjct: 76 ASVIKPADAVINFVGILAETGSQRFEALQGELPGKIGMLARQNDVADVVHISAIGADADS 135
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P+ Y RTK GE + EFP+A I RPS ++G D F + +M A
Sbjct: 136 PSLY-------ARTKAAGEAGLHNEFPDAVILRPSIVFGPRDGFFNRFANM---ALTAPA 185
Query: 202 VYKKGEETIK-QPVYVGDVAAAIVAAC----KDPDAAGKIYQAVGPKRYLLSELLD 252
+ G T++ QPVYVGDV AAI A+ + GK ++ GP Y +L++
Sbjct: 186 LPLPGGGTMRMQPVYVGDVVAAIEASIGIGKTKINPRGKFFELGGPDIYSFRQLME 241
>gi|421851938|ref|ZP_16284630.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371479957|dbj|GAB29833.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 317
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 15/248 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR--N 77
+ATV G G++G Y+ L + G ++ + R R LR G +GQ+ P++ +
Sbjct: 6 IATVLGGGGFVGRYVVQNLARAGYEVRVASRRPDLTAR-LRALGRVGQI--APFYASVLD 62
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
D I A++ ++VVINL+ + K T+ NVE R+AR++ E V F+ +SAL A
Sbjct: 63 DASIACAVQGADVVINLVAVLTSVKQQTLQAVNVEGAGRVARIAAEANVPVFVQMSALGA 122
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
+ S++ +++ GEK V + P+A I RPS ++G D F + + R+
Sbjct: 123 SE-------TALSEYGKSRAAGEKIVRQYRPDAVIIRPSVIFGPEDHFFNMFAGLARY-L 174
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
L VY QPVYVGDVA AI + AGK + GP+ + ++ + V
Sbjct: 175 PCLPVYSAHARL--QPVYVGDVAQAIFMVAQSSAFAGKEFLLGGPQEMTMLDIARFVLRV 232
Query: 258 MKKGEPDY 265
++ +P +
Sbjct: 233 TQRHKPVF 240
>gi|307731313|ref|YP_003908537.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003]
gi|307585848|gb|ADN59246.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003]
Length = 317
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 121/238 (50%), Gaps = 23/238 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQV-LFQPYHPRNDD 79
+ G SG++GS+L N L + G ++ I R Y+ R L L D+ + +F P
Sbjct: 7 AIIGGSGFIGSHLVNALVEMGKEVRIATRRR-YNARHLTLLPIDVIETDVFDPV------ 59
Query: 80 EIRKAIKYSNVVINLIGREFATKNF----TIADANVEIPARLARLSKEMGVEKFIHISAL 135
++ + ++ ++ VINL+G + A A+VE+P R+ + GV + IH+SAL
Sbjct: 60 QLARFVEGADCVINLVGTLHGKRRTPYGPEFARAHVELPTRIVAACEGKGVHRLIHLSAL 119
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD N P+ Y R+K GEK V T+FRPS ++G D+FL + + R
Sbjct: 120 GADSNGPSMY-------SRSKGDGEKAVHAANLAWTVFRPSVVFGPEDQFLNKFAFLQR- 171
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+F + + QPVYVGDVA AIV A+GK Y+ GP Y L EL+ +
Sbjct: 172 IFPVIPLAMPDARF--QPVYVGDVAKAIVNVLDLDAASGKTYELGGPSVYTLEELVKY 227
>gi|73666668|ref|YP_302684.1| NADH-ubiquinone oxidoreductase, putativ [Ehrlichia canis str. Jake]
gi|72393809|gb|AAZ68086.1| NADH-ubiquinone oxidoreductase, putativ [Ehrlichia canis str. Jake]
Length = 320
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 15/240 (6%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY--DVRDLRLCGDLGQVLFQPYHPRNDDE 80
+FG SG++G YL + G I I R Y + L+LCG+LGQ+ N E
Sbjct: 8 IFGGSGFIGRYLVKYFAENGYIIKIFTR---YPEKAKQLKLCGNLGQIEVISGDVTNVQE 64
Query: 81 IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
I I +VV+NL+G ++TKN T D + + +A+ +K VE +H SA+ D
Sbjct: 65 IENNIFGCHVVVNLLGTLYSTKNSTFYDIHAKAAENIAKAAKSCDVELMVHFSAMGIDEV 124
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
++Y R+K GE V FP A I RP+ ++G+ D+F + + +
Sbjct: 125 QQSHY-------ARSKLIGENLVKLAFPNAVIIRPNLVFGAEDRFFNKFAKLT--MISPF 175
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260
G + QP+YV D+A + + K+Y GP+ Y ELL++ ++K+
Sbjct: 176 LPVIGGGRAVFQPIYVDDLAKFVFYIVNNA-VTDKLYNVCGPRTYSFKELLNFILSIIKR 234
>gi|359795851|ref|ZP_09298464.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
arsenitoxydans SY8]
gi|359366170|gb|EHK67854.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
arsenitoxydans SY8]
Length = 312
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 118/241 (48%), Gaps = 31/241 (12%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G +L +L Q+I+P R F RDL+L L V +D +
Sbjct: 5 VIGGTGFIGRHLVARLCADQHQVIVPTR-LFARGRDLQL---LPTVTLLQTDIHDDASLD 60
Query: 83 KAIKYSNVVINLIG-------REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ ++ +VV+NL+G R + + A A+V +P R+A+ GV + +H+SAL
Sbjct: 61 RLVQGCDVVVNLVGILHGNAGRPYGSD---FARAHVHLPQRIAQACLRHGVHRLLHVSAL 117
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA-----TIFRPSDMYGSGDKFLRYYG 190
AD SG S + R+K GE + + F + TIFRPS ++G D F
Sbjct: 118 GADS-------SGDSMYQRSKGDGEAAIKQAFHDRRDGCWTIFRPSVLFGPDDHFT---- 166
Query: 191 HMWRHVFRKLAVYK-KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
+M+ + R L V G QPVYVGDV A+ A D GK Y+ GP+ Y L E
Sbjct: 167 NMFASLARWLPVLPLAGAHVRMQPVYVGDVVTAMSTALGDTHTCGKTYELGGPQVYTLGE 226
Query: 250 L 250
+
Sbjct: 227 I 227
>gi|258543053|ref|YP_003188486.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-01]
gi|384042975|ref|YP_005481719.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-12]
gi|384051492|ref|YP_005478555.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-03]
gi|384054599|ref|YP_005487693.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-07]
gi|384057834|ref|YP_005490501.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-22]
gi|384060475|ref|YP_005499603.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-26]
gi|384063767|ref|YP_005484409.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-32]
gi|384119776|ref|YP_005502400.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256634131|dbj|BAI00107.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-01]
gi|256637191|dbj|BAI03160.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-03]
gi|256640243|dbj|BAI06205.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-07]
gi|256643300|dbj|BAI09255.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-22]
gi|256646355|dbj|BAI12303.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-26]
gi|256649408|dbj|BAI15349.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-32]
gi|256652394|dbj|BAI18328.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256655452|dbj|BAI21379.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-12]
Length = 317
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 15/248 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR--N 77
+ATV G G++G Y+ L + G ++ + R R LR G +GQ+ P++ +
Sbjct: 6 IATVLGGGGFVGRYVVQNLARAGYEVRVASRRPDLTAR-LRALGRVGQI--APFYASVLD 62
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
D I A++ ++VVINL+ + K T+ NVE R+AR++ E V F+ +SAL A
Sbjct: 63 DASIACAVQGADVVINLVAVLTSVKQQTLQAVNVEGAGRVARIAAEANVPVFVQMSALGA 122
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
+ S++ +++ GEK V + P+A I RPS ++G D F + + R+
Sbjct: 123 SE-------TALSEYGKSRAAGEKIVRQYRPDAVIIRPSVIFGPEDHFFNMFAGLARY-L 174
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
L VY QPVYVGDVA AI + AGK + GP+ + ++ + V
Sbjct: 175 PCLPVYSAHARL--QPVYVGDVAQAIFMVAQSSAFAGKEFLLGGPQEMTMLDIARFVLRV 232
Query: 258 MKKGEPDY 265
++ +P +
Sbjct: 233 TQRHKPVF 240
>gi|154344721|ref|XP_001568302.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065639|emb|CAM43410.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 369
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 21/255 (8%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGD--L 65
G ++ GV FGA+G +G ++ G I+P+R G VR +R GD +
Sbjct: 18 GAEANTMGVNVATFGATGILGHHIHAVNCYHGYTSILPFRFRAGMPSSVRQMRSSGDGTV 77
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR-------EFATKNFTIADANVEIPARLA 118
GQ Y + ++ ++ + VIN++G E + F++ NVE P LA
Sbjct: 78 GQNFDTDYEIDKEFVVKAILEKVDNVINVVGAWQEPACYENSQSWFSMEAINVEWPRMLA 137
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
R +EMG+ K H+S + AD + P S+ R K + E VL EFP ATI R +D+
Sbjct: 138 RWCREMGILKLTHMSMVGADLDSP-------SKLLRQKREAEIAVLEEFPTATIIRGTDI 190
Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
+ D Y ++ + K+ + I QPV+ GD+A A + G+I +
Sbjct: 191 FAEND--FSYSKYLKAQRYMKIVPVPNHGQRIHQPVFAGDLAEAAARSLLLDHTEGRIAE 248
Query: 239 AVGPKRYLLSELLDW 253
GP R+ ++LL W
Sbjct: 249 LGGPVRFTTNDLLRW 263
>gi|114319195|ref|YP_740878.1| NAD-dependent epimerase/dehydratase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114225589|gb|ABI55388.1| NAD-dependent epimerase/dehydratase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 320
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 120/237 (50%), Gaps = 19/237 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G SG++G+ + +LG+ G ++I+P R + R L + V + ++D +
Sbjct: 8 ILGGSGFIGTTIAGRLGRDGHRVIVPTR---HRERSRHLL-PVPNVEVVELNVNDEDALV 63
Query: 83 KAIKYSNVVINLIG--REFA-TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+A + VINL+G E + K A+VE+P R+ + GV +++H+SAL ADP
Sbjct: 64 EAFQDCTAVINLVGILNELSGPKGEGFRRAHVELPRRVISACQRAGVGRYLHMSALGADP 123
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEA---TIFRPSDMYGSGDKFLRYYGHMWRHV 196
P+ Y +TK +GE+ + + T FRPS ++GSGD F + + R
Sbjct: 124 EGPSLY-------QQTKGEGERLAIAAHGDGLSVTAFRPSVVFGSGDSFFNRFAGLLR-- 174
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
++ QPV+V DVA+A + +D G++Y VGPKRY L L+ +
Sbjct: 175 LSPGFMFLPTPHAEFQPVWVNDVASAFIRCLEDQATGGQVYDLVGPKRYTLEALVRY 231
>gi|295677990|ref|YP_003606514.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1002]
gi|295437833|gb|ADG17003.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1002]
Length = 317
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 134/285 (47%), Gaps = 43/285 (15%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL--CGDLGQVLFQPYHPRNDD 79
V G SG++GSYL N L + G + + R Y+ R L + L +F P
Sbjct: 7 AVIGGSGFIGSYLVNSLVEMGKDVRVATR-RRYNARHLTMLPIDVLETDVFDPV------ 59
Query: 80 EIRKAIKYSNVVINLIG-----------REFATKNFTIADANVEIPARLARLSKEMGVEK 128
++ + ++ ++ VINL+G REFA A+VE+P R+ + GV +
Sbjct: 60 QLARFVEGADCVINLVGILNGKRGKPYGREFA-------HAHVELPTRIVAACEGKGVHR 112
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
IH+SAL A+P P+ Y R+K GEK V TIFRPS ++G D FL
Sbjct: 113 LIHLSALGANPGGPSMY-------ARSKGDGEKAVHAANVAWTIFRPSVVFGPEDAFLNK 165
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ + R VF + + + QPVYVGDVA AIV +G+ Y+ GP Y L
Sbjct: 166 FAFLQR-VFPAIPLAMPDAQF--QPVYVGDVAKAIVNVLDMDGGSGRTYELGGPTVYTLE 222
Query: 249 ELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPM 293
+L+ + V+ K + R +P+ L+ L PG P+
Sbjct: 223 DLVSYCGDVIGK------HARIIRLPEPLARLQALSFELAPGEPV 261
>gi|421848910|ref|ZP_16281896.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus NBRC 101655]
gi|371460430|dbj|GAB27099.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus NBRC 101655]
Length = 317
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 15/248 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR--N 77
+ATV G G++G Y+ L + G ++ + R R LR G +GQ+ P++ +
Sbjct: 6 IATVLGGGGFVGRYVVQNLARAGYEVRVASRRPDLTAR-LRALGRVGQI--APFYASVLD 62
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
D + A++ ++VVINL+ + K T+ NVE R+AR++ E V F+ +SAL A
Sbjct: 63 DASVACAVQGADVVINLVAVLTSVKQQTLQAVNVEGAGRVARIAAEANVPVFVQMSALGA 122
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
+ S++ +++ GEK V + P+A I RPS ++G D F + + R+
Sbjct: 123 SE-------TALSEYGKSRAAGEKIVRQYRPDAVIIRPSVIFGPEDHFFNMFAGLARY-L 174
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
L VY QPVYVGDVA AI + AGK + GP+ + ++ + V
Sbjct: 175 PCLPVYSAHARL--QPVYVGDVAQAIFMVAQSSAFAGKEFLLGGPQEMTMLDIARFVLRV 232
Query: 258 MKKGEPDY 265
++ +P +
Sbjct: 233 TQRHKPVF 240
>gi|85375744|ref|YP_459806.1| NADH ubiquinone oxidoreductase [Erythrobacter litoralis HTCC2594]
gi|84788827|gb|ABC65009.1| NADH ubiquinone oxidoreductase, putative [Erythrobacter litoralis
HTCC2594]
Length = 316
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G+++ L ++G+++ I R N L+ +LGQ+ F + +D +
Sbjct: 13 TVFGGSGFLGTHVAQALLERGARLRIASR-NPEKAFKLKPLANLGQLQFARCNILREDSV 71
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
++ +++V+NL+G + + A +I A+++ + GVE + +SA+ ADP
Sbjct: 72 SACVQGADMVVNLVGSFEGDQIALMGKAAGQI----AQVAADQGVEALVQVSAIGADPEG 127
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
T Y G K GEK VL FP+ATI RPS ++G+ D FL + + + L
Sbjct: 128 QTDYSIG-------KGLGEKLVLEAFPKATILRPSIVFGADDDFLNMFAGLI-QMMPALP 179
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSEL 250
V+ G + Q V+V DVA AI + DP GKIY+ GP+ + E+
Sbjct: 180 VF--GPKAELQLVHVDDVAEAIAVSLADPGKHGGKIYELGGPEVLTMLEV 227
>gi|292490281|ref|YP_003525720.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4]
gi|291578876|gb|ADE13333.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4]
Length = 302
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 14/231 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG +G++G + + G + I R G Q+ Q R+++ +
Sbjct: 7 TVFGGTGFLGRAIVRHFVESGVAVRIAARHPSAP----EFAGASNQIELQSADVRDENSV 62
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ + V+N +G T +VE R+AR ++E + K +HIS + ADP
Sbjct: 63 AEAVNGATGVVNAVGLYVEKGKATFDAIHVEGAERIARRAREANIRKLVHISGIGADPG- 121
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
S++ R + GE+ V FPEA I RPS ++G D FL + R +
Sbjct: 122 ------SASKYVRARAHGEQRVQSAFPEAVILRPSVLFGPNDAFLGALKTVTR--LPVVP 173
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
++ KG + QPVYV DVA A++ A + P AG+I++ G + Y ++L+
Sbjct: 174 LFGKGTTRL-QPVYVEDVARAVLQALETPGVAGRIFELGGAQIYSYRDILE 223
>gi|323527660|ref|YP_004229813.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1001]
gi|323384662|gb|ADX56753.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1001]
Length = 317
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 121/238 (50%), Gaps = 23/238 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQV-LFQPYHPRNDD 79
+ G SG++GS+L N L + G + I R Y+ R L L D+ + +F P
Sbjct: 7 AIIGGSGFIGSHLVNALVEMGKDVRIATRRR-YNARHLTLLPIDVIETDVFDPV------ 59
Query: 80 EIRKAIKYSNVVINLIGREFATKNF----TIADANVEIPARLARLSKEMGVEKFIHISAL 135
++ + ++ ++ VINL+G + A A+VE+P R+A + GV + IH+SAL
Sbjct: 60 QLARFVEGTDCVINLVGTLHGKRRTPYGPEFARAHVELPTRIAAACEGKGVHRLIHLSAL 119
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD N P+ Y R+K GEK V T+FRPS ++G D+FL + + R
Sbjct: 120 GADSNGPSMY-------SRSKGDGEKAVHAANLAWTVFRPSVVFGPEDQFLNKFAFLQR- 171
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+F + + + QPVYVGDVA AIV A GK Y+ GP Y L +L+ +
Sbjct: 172 IFPVIPLAMPDAKF--QPVYVGDVAKAIVNVLDLDAANGKTYELGGPSVYTLEQLVKY 227
>gi|330813575|ref|YP_004357814.1| NADH-ubiquinone oxidoreductase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486670|gb|AEA81075.1| NADH-ubiquinone oxidoreductase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 316
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 13/236 (5%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+FG +G++G + L K +I I R N Y ++L++ GD+ Q+ + ++ +
Sbjct: 9 TVAIFGGTGFIGEEIVQHLSKNSYRIKIATR-NTYLAQNLKVFGDIAQIELHQVNLKSKE 67
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARL-SKEMGVEKFIHISALNAD 138
I K ++ +V +NL+G F T++ + + P LA + SK +H SAL +
Sbjct: 68 SIEKFLEGCDVCVNLVGILFETRSQKFKELHTNFPKMLATIFSKSSSSNLLVHFSALGVN 127
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
N + YI ++K+ GE+EV F +TI RPS + G+ DKF + + +F
Sbjct: 128 SNSNSSYI-------KSKFLGEEEVKSNFLNSTIIRPSIVIGAKDKFFNMFAKLA-GLFP 179
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ + G E QPVYVGDVA AI + + + K Y+ G Y EL++
Sbjct: 180 LIPLV--GSEVKFQPVYVGDVAKAIDKIITN-NISKKTYELAGKNIYTFKELIELL 232
>gi|409400000|ref|ZP_11250190.1| NADH dehydrogenase (ubiquinone) [Acidocella sp. MX-AZ02]
gi|409130929|gb|EKN00661.1| NADH dehydrogenase (ubiquinone) [Acidocella sp. MX-AZ02]
Length = 312
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 127/238 (53%), Gaps = 19/238 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ATVFGASG++G ++ +L + G ++ R + + L+ GD+GQV+ Y P +D+
Sbjct: 7 IATVFGASGFLGRHIVQRLAEAGYRVRAAVR-DVEGAKFLKPMGDVGQVV-PLYAPVSDE 64
Query: 80 E-IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+AI+ + +VINL G ++ + + R+ARL+ G + +H+SA+ A+
Sbjct: 65 AACMRAIEGAQIVINLAGILAESRTGDFGRTHAQGAGRVARLAYAAGA-RLVHVSAIGAN 123
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P + S + R+K +GE+ V P A I RPS ++G D+F + M
Sbjct: 124 P-------ASASSYARSKGEGEQAVRAAHPRAAILRPSIVFGPQDEFFNRFAKMAVVSPI 176
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD 252
VY ET QPV+VGDVA A + A P A G+I++ GP+ R L+ ++LD
Sbjct: 177 LPVVYG---ETKFQPVFVGDVADAAMLALY-PQAEGQIFELGGPEQKSFRALMRQMLD 230
>gi|56698590|ref|YP_168967.1| NADH ubiquinone oxidoreductase [Ruegeria pomeroyi DSS-3]
gi|56680327|gb|AAV96993.1| NADH ubiquinone oxidoreductase, putative [Ruegeria pomeroyi DSS-3]
Length = 327
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 124/243 (51%), Gaps = 22/243 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K+G ++ + R + ++ G +GQV + R+D+
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMHVKPYGAVGQVEPVLCNLRDDN 62
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ + ++ ++ V+N +G E +F A E R+AR++ E GV + +H+SA+ A
Sbjct: 63 SVAQTMRGADAVVNCVGVLNELGRNSFDAVQA--EGAERIARIAAEQGVARMVHVSAIGA 120
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH-V 196
D + + Y R+K GE VLR P+A I RPS ++G+ D+F + M R
Sbjct: 121 DGDSDSAY-------SRSKALGEAGVLRHMPDAMILRPSVIFGTEDQFFNRFAGMTRFGP 173
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD 252
F + G ET QPVYV DVA A V A G +Y+ GP R L+ +L
Sbjct: 174 FLPVV----GAETRFQPVYVDDVARAAVKGVLG-QAPGGVYELGGPDVETFRALMQRMLG 228
Query: 253 WFH 255
H
Sbjct: 229 VIH 231
>gi|260431917|ref|ZP_05785888.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415745|gb|EEX09004.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Silicibacter
lacuscaerulensis ITI-1157]
Length = 327
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 125/242 (51%), Gaps = 20/242 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G Y+ ++ +G ++ + R + ++ G +GQV + R+D
Sbjct: 4 LVTIFGGSGFVGRYVARRMANEGWRVRVAVR-RPNEAIFVKTYGVVGQVEPILCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A++ ++ V+N +G + F A E R+ARL+ + G+++ +HISA+ A
Sbjct: 63 SVANAMRGADAVVNCVGVLNDLGKNGFEAVQA--EGAERIARLAAQQGIKRMVHISAIGA 120
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DP S++ R+K QGE VL P A I RPS ++G D+F + M R +
Sbjct: 121 DP-------ESDSEYARSKAQGEAGVLAHMPNAVILRPSVIFGPEDQFFNRFAAMTR-MS 172
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDW 253
L ++ G +T QPVYV DVA A V G IY+ GP+ R L+ ++L+
Sbjct: 173 PFLPIF--GADTRFQPVYVDDVAQAAVKGVLGQAEPG-IYELGGPEVKTFRELMQQMLEV 229
Query: 254 FH 255
H
Sbjct: 230 IH 231
>gi|58616759|ref|YP_195958.1| hypothetical protein ERGA_CDS_00320 [Ehrlichia ruminantium str.
Gardel]
gi|58416371|emb|CAI27484.1| Conserved hypothetical protein, similar to human and bovine
NADH-ubiquinone oxidoreductase 39 kDa subunit [Ehrlichia
ruminantium str. Gardel]
Length = 320
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 111/231 (48%), Gaps = 11/231 (4%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG SG++G YL G II + + LRLCG LGQ+ N+ E+
Sbjct: 8 IFGGSGFIGKYLVRYFSNAG-YIIKVFTKCPEKAKQLRLCGLLGQIEIVSGDINNNKELV 66
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ I VINLIG + TK T + + I +A+++K++ VE +H SA+ D
Sbjct: 67 EHISGCYGVINLIGTLYNTKKTTFYNVHAHIAENIAKIAKQLNVELMVHFSAMGIDN--- 123
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
S + ++K GE+ V FP+A I RP+ ++G DKF + + + L V
Sbjct: 124 ----ICNSDYAKSKLIGERLVKESFPDAVIVRPNLVFGPEDKFFNKFARLLM-ILPFLPV 178
Query: 203 YKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
G + + QPVYV DV A +V D K+Y GP Y ELL+
Sbjct: 179 VGGG-KFVFQPVYVDDV-AKLVFHIIDYKIKDKLYNVCGPSTYSFKELLNL 227
>gi|126736160|ref|ZP_01751903.1| NADH-ubiquinone oxidoreductase, putative [Roseobacter sp. CCS2]
gi|126714326|gb|EBA11194.1| NADH-ubiquinone oxidoreductase, putative [Roseobacter sp. CCS2]
Length = 326
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 126/241 (52%), Gaps = 12/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G Y+ ++ K+G ++ + R N + +R G +GQV + R+D
Sbjct: 4 LVTIFGGSGFVGRYIARRMAKEGWRVRVAVR-NVNEAMFVRPYGVVGQVEPVFCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ I ++ V+N +G T + E PAR+AR++ G+ + +HISA+ AD
Sbjct: 63 SVEAVINGADAVVNCVGVLDEVGKNTFSAVQTEGPARIARIAAAHGITRMVHISAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S++ +TK GE VL+ P+A I RPS ++G D+F + M R +
Sbjct: 123 D-------AASEYSKTKAAGESGVLQHMPDAMILRPSIIFGPEDQFFNRFAGMSR-LGPV 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
L V G +T QPVYV DVAAA V +A G +Y+ GP + EL+ V++
Sbjct: 175 LPVI--GADTRFQPVYVDDVAAAAVKGVLG-EAEGGVYELGGPDVHTFRELMQLMLDVIR 231
Query: 260 K 260
+
Sbjct: 232 R 232
>gi|402824635|ref|ZP_10873985.1| NADH dehydrogenase [Sphingomonas sp. LH128]
gi|402261820|gb|EJU11833.1| NADH dehydrogenase [Sphingomonas sp. LH128]
Length = 317
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 113/235 (48%), Gaps = 15/235 (6%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
+G + T+ G SG++G +L +L +G+++ I R + ++ G+LGQV F
Sbjct: 6 LSGKIVTILGGSGFVGRHLAQELLARGARLRIASR-HPKKAFAIKPLGNLGQVQFAGVDV 64
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
D + + S+ V+NL+G + +I A +K G F+H+SA+
Sbjct: 65 TKADTVAAVLAGSDAVVNLVGAFAGNLDALQGKGTGDI----AAAAKAAGAAAFVHVSAI 120
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD Y RTK +GE VL FP ATI RPS M+G D F+ +G +
Sbjct: 121 GADAGSEVAY-------ARTKAEGEAAVLAAFPTATIVRPSLMFGPDDNFVNMFGEL--- 170
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ R A+ E QPV+V DVA AI A DA GK ++ GP+ + EL
Sbjct: 171 ISRLPALPVFAPEAKLQPVFVDDVAVAIANALGRADAQGKTFELAGPEVVTMLEL 225
>gi|407715042|ref|YP_006835607.1| NADH dehydrogenase [Burkholderia phenoliruptrix BR3459a]
gi|407237226|gb|AFT87425.1| NADH dehydrogenase [Burkholderia phenoliruptrix BR3459a]
Length = 317
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 121/238 (50%), Gaps = 23/238 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQV-LFQPYHPRNDD 79
+ G SG++GS+L N L + G + I R Y+ R L L D+ + +F P
Sbjct: 7 AIIGGSGFIGSHLVNALVEMGKDVRIATRRR-YNARHLTLLPIDVIETDVFDPV------ 59
Query: 80 EIRKAIKYSNVVINLIGREFATKNF----TIADANVEIPARLARLSKEMGVEKFIHISAL 135
++ + ++ ++ VINL+G + A A+VE+P R+A + GV + IH+SAL
Sbjct: 60 QLARFVEGTDCVINLVGTLHGKRRTPYGPEFARAHVELPTRIAAACEGKGVHRLIHLSAL 119
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD + P+ Y R+K GEK V T+FRPS ++G D+FL + + R
Sbjct: 120 GADSHGPSMY-------SRSKGDGEKAVHAANLAWTVFRPSVVFGPEDQFLNKFAFLQR- 171
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
VF + + + QPVYVGDVA AIV A GK Y+ GP Y L +L+ +
Sbjct: 172 VFPVIPLAMPDAKF--QPVYVGDVAKAIVNVLDLDAANGKTYELGGPSVYTLEQLVKY 227
>gi|57238773|ref|YP_179909.1| NADH-ubiquinone oxidoreductase subunit [Ehrlichia ruminantium str.
Welgevonden]
gi|58578697|ref|YP_196909.1| hypothetical protein ERWE_CDS_00330 [Ehrlichia ruminantium str.
Welgevonden]
gi|57160852|emb|CAH57752.1| putative NADH-ubiquinone oxidoreductase subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58417323|emb|CAI26527.1| Conserved hypothetical protein, similar to human and bovine
NADH-ubiquinone oxidoreductase 39 kDa subunit [Ehrlichia
ruminantium str. Welgevonden]
Length = 320
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 111/231 (48%), Gaps = 11/231 (4%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG SG++G YL G I + R + LRLCG LGQ+ N+ E+
Sbjct: 8 IFGGSGFIGKYLVRYFSNAGYIIKVFTRCP-EKAKQLRLCGLLGQIEIVSGDINNNKELV 66
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ I VINLIG + TK T + + + +A+++K++ VE +H SA+ D
Sbjct: 67 EHISGCYGVINLIGTLYNTKKTTFYNVHAHVAENIAKIAKQLNVELMVHFSAMGIDN--- 123
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
S + ++K GE+ V FP+A I RP+ ++G DKF + + + L V
Sbjct: 124 ----ICNSDYAKSKLIGERLVKESFPDAVIVRPNLVFGPEDKFFNKFARLLM-ILPFLPV 178
Query: 203 YKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
G + + QPVYV DV A +V D K+Y GP Y ELL+
Sbjct: 179 VGGG-KFVFQPVYVDDV-AKLVFHIIDYKIKDKLYNVCGPSTYSFKELLNL 227
>gi|347756860|ref|YP_004864422.1| NAD dependent epimerase/dehydratase family protein [Micavibrio
aeruginosavorus ARL-13]
gi|347589378|gb|AEP08420.1| NAD dependent epimerase/dehydratase family protein [Micavibrio
aeruginosavorus ARL-13]
Length = 323
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ATVFG SG++G Y+ L + G + + R LR G +GQ++ + R+
Sbjct: 7 IATVFGGSGFVGRYVVQALARAGYTVKVASRAA-ESAYFLRPYGTVGQIVPMTCNVRDRA 65
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ + I S+VV+N IG + K + ++P +A L V +F+HISAL AD
Sbjct: 66 SVERVIAGSSVVVNCIGILYERKRGDFKRLHTDLPQMIAELCTAQNVSRFVHISALGADR 125
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
NP S++ RTK GE+ VL FP ATI RPS ++G D F + M F
Sbjct: 126 NP--------SRYSRTKLAGEQAVLAAFPNATILRPSVIFGPEDDFFNRFATMAG--FMP 175
Query: 200 LAVYKKGEETIKQPVYV 216
G T QPVYV
Sbjct: 176 ALPLIGGGMTRFQPVYV 192
>gi|149184920|ref|ZP_01863237.1| NADH ubiquinone oxidoreductase, putative [Erythrobacter sp. SD-21]
gi|148831031|gb|EDL49465.1| NADH ubiquinone oxidoreductase, putative [Erythrobacter sp. SD-21]
Length = 344
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 119/238 (50%), Gaps = 16/238 (6%)
Query: 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH 74
+ NG + G +G++G+Y+ L +G+++ I R N L+ +LGQ+ F
Sbjct: 34 ALNGKTVALMGGTGFLGNYVAQALLSRGARLRICGR-NPQAAFKLKPLANLGQLQFARMD 92
Query: 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
+ + + IK ++ V+NL+G + + +A E P +A +K+ G F+H+SA
Sbjct: 93 ATDRRSVEQCIKGADAVVNLVG----SFDGDLARLMGEAPGWMAEAAKKTGAMSFVHVSA 148
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ A+P +++ K+ GE+ V F ATI RPS ++G D FL +G +
Sbjct: 149 IAAEPEE-----DWSNEYASAKHMGERRVTEAFKNATIVRPSIIFGKDDNFLNMFGEL-- 201
Query: 195 HVFRKLAVYKK-GEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSEL 250
KL V G E Q VYV DVA AI + ++P GK Y+ GP++ + E+
Sbjct: 202 --ISKLPVLPVFGPEAELQLVYVDDVAEAIAQSVENPGKHGGKTYELGGPEKLSMIEI 257
>gi|83950651|ref|ZP_00959384.1| NADH ubiquinone oxidoreductase, putative [Roseovarius nubinhibens
ISM]
gi|83838550|gb|EAP77846.1| NADH ubiquinone oxidoreductase, putative [Roseovarius nubinhibens
ISM]
Length = 326
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ +L KQG +I + R + ++ G +GQV + R+D
Sbjct: 4 IVTIYGGSGFVGRYIARRLAKQGWRIRVAVR-RPNEAMHVKPYGVVGQVEPILCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R A++ + V+N +G A E R+AR++ E GV + + ISA+ AD
Sbjct: 63 SVRAAMQGVDAVVNCVGTFDARGKNNFDAVQHEGAERVARIAAEEGVARLVQISAIGADT 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
S + R+K GE+ VL FP A I RPS ++G D F + M R +
Sbjct: 123 Q-------AASDYARSKGLGEEAVLGHFPSAVILRPSVIFGPEDGFFNRFAGMTR-LGPV 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
L V G ET QPVYV DVA A V + A G IY+ GP EL+ V++
Sbjct: 175 LPVV--GAETKFQPVYVDDVAKAAVEGVEGRAAPG-IYELGGPDVNSFRELMQQMLGVIR 231
Query: 260 K 260
+
Sbjct: 232 R 232
>gi|402773021|ref|YP_006592558.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. SC2]
gi|401775041|emb|CCJ07907.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. SC2]
Length = 343
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 126/253 (49%), Gaps = 29/253 (11%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPY 73
G V TVFG SG++G Y+ L + G ++ + R F+ L+ G +GQV+
Sbjct: 11 EGRVVTVFGGSGFVGRYVVRALARDGWRVRVACRRPDLAFF----LQPLGRVGQVMAVQA 66
Query: 74 HPRNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARL----SKEMGVE 127
+ R+ + I A++ ++ V+NL+G E + F + AR AR+ +K G+
Sbjct: 67 NVRSPESIAAALRGASAVVNLVGILAETGAQKFA------TVQARGARVIAEAAKAAGIA 120
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+HISA+ ADP P+ Y R+K +GE +L P I RPS ++G D F
Sbjct: 121 NVVHISAIGADPQSPSSY-------GRSKAEGEAAMLAAVPSTVILRPSVIFGPEDDFFN 173
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ M R+ F + + G ET QPVYVGDVA A+ A G Y+ GP+
Sbjct: 174 RFATMARY-FPVVPIV--GAETKFQPVYVGDVADAVAIALAGRAKPGVAYELGGPEVKSF 230
Query: 248 SELLDWFHVVMKK 260
+E++D+ V ++
Sbjct: 231 AEIVDYVLKVTQR 243
>gi|307942962|ref|ZP_07658307.1| NADH dehydrogenase [Roseibium sp. TrichSKD4]
gi|307773758|gb|EFO32974.1| NADH dehydrogenase [Roseibium sp. TrichSKD4]
Length = 324
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 121/248 (48%), Gaps = 12/248 (4%)
Query: 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY 73
++ NG + TVFG SG++G ++ L ++G ++ R L+ G GQ +
Sbjct: 3 TALNGKLVTVFGGSGFIGRHVIRALARRGYRVRAAVRRPDLATH-LQPLGTPGQTMAIQA 61
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHI 132
+ R I +AI+ + VIN +G T T DA AR +A +++ G+ +HI
Sbjct: 62 NLRYRWSIDRAIEGVDAVINAVGILAPTGKQTF-DAVQSFGARAIAEAARDSGLSSMVHI 120
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
SA+ AD N S++ RTK +GE VL P++ I RPS ++G D F + M
Sbjct: 121 SAIGADANSV-------SEYARTKAEGEAAVLEALPDSVILRPSIVFGPEDNFFNQFAAM 173
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ L + GE T+ QPVYV DVA A+ A AG +Y+ GP+ E L+
Sbjct: 174 -SGMAPALPLIGGGE-TLFQPVYVQDVAEAVAQAVDGKLKAGAVYELGGPEALSFKECLE 231
Query: 253 WFHVVMKK 260
V+ +
Sbjct: 232 LMLAVIDR 239
>gi|68171582|ref|ZP_00544955.1| NADH-ubiquinone oxidoreductase, putative [Ehrlichia chaffeensis
str. Sapulpa]
gi|88658323|ref|YP_506894.1| putative NADH-ubiquinone oxidoreductase,-like protein [Ehrlichia
chaffeensis str. Arkansas]
gi|67998992|gb|EAM85670.1| NADH-ubiquinone oxidoreductase, putative [Ehrlichia chaffeensis
str. Sapulpa]
gi|88599780|gb|ABD45249.1| putative NADH-ubiquinone oxidoreductase, homolog [Ehrlichia
chaffeensis str. Arkansas]
Length = 320
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 15/235 (6%)
Query: 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY--DVRDLRLCGDLGQVLFQPYHPRND 78
+FG SG++G YL + G I I R Y + L+LCG+LGQV + N
Sbjct: 6 VVMFGGSGFIGRYLVKYFAENGYVIRIVTR---YPEKAKQLKLCGNLGQVEVISGNVANS 62
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+E+ + I+ N+VINL+G ++ K T D + + +A+ +K V+ IH SA+
Sbjct: 63 EEVIEHIRDCNIVINLLGVLYSAKKSTFYDIHAKAAENIAKAAKRCKVKLMIHFSAMGIT 122
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
+ S + ++K GE V FP+A I RP+ ++G DKF + + +F
Sbjct: 123 E-------TQKSDYAKSKLIGENLVKSAFPDAVIIRPNLVFGPEDKFFNKFAQL-SMIFP 174
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
L V G + QP+YV D+A + + ++ K+Y GP Y ELL +
Sbjct: 175 FLPVIGGG-RAVFQPIYVDDLAKFVFSIVEN-SITDKLYNVCGPCTYSFKELLSF 227
>gi|217969135|ref|YP_002354369.1| NAD-dependent epimerase/dehydratase [Thauera sp. MZ1T]
gi|217506462|gb|ACK53473.1| NAD-dependent epimerase/dehydratase [Thauera sp. MZ1T]
Length = 318
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 124/259 (47%), Gaps = 38/259 (14%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G SG++GS + N+L K+G +++IP R R R G VL P + +
Sbjct: 7 VIVGGSGFIGSAIANRLCKEGVKVLIPTR------RRSRA----GHVLLLPNVEVVEGNV 56
Query: 82 R------KAIKYSNVVINLIG-------REFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ + ++ V+N +G R F A A+VE+P ++ + GV +
Sbjct: 57 HDVALLARLFEGADAVVNTVGVLHSRPGRPFGPD---FARAHVELPQKIVAACRTAGVPR 113
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA--TIFRPSDMYGSGDKFL 186
+HISAL A Y G S++ R+K GE + PE TI +PS ++G GD FL
Sbjct: 114 LVHISALGA-------YSDGPSEYQRSKAAGETAIRTGSPEIAWTILQPSVVFGRGDSFL 166
Query: 187 RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
+ + R +F L + G QPVYV DVA A+ + DA G+ +Q GP Y
Sbjct: 167 NLFADLAR-MFPVLPL--AGATARFQPVYVEDVAEAVWQSLTRDDAGGQTFQLAGPTVYT 223
Query: 247 LSELLDWFHVVMKKGEPDY 265
L +L+++ ++ K P Y
Sbjct: 224 LRQLVEYVSALVGKPRPIY 242
>gi|296282062|ref|ZP_06860060.1| NADH ubiquinone oxidoreductase, putative [Citromicrobium
bathyomarinum JL354]
Length = 316
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 16/232 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
V T+FG SG++G ++ L +Q +++ I R + + L+ LGQ+ F ++
Sbjct: 11 VVTIFGGSGFIGRHVAEDLLQQNARVRIAAR-HPEEAFSLKPLAKLGQLQFARCDILDER 69
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R ++ S+ V+NL+G T + E LAR +K+ G +F+ +SA+ AD
Sbjct: 70 SVRACVEGSDAVVNLVG----TFEGDLMKLMGEAAGNLARAAKDAGASRFVQVSAIGADR 125
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N P+ Y + K GE+ V FP+ATI RPS ++G L + +
Sbjct: 126 NGPSTY-------AQAKALGEELVRDAFPKATILRPSIIFGPDGGILNLFADLIAS-LPV 177
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSEL 250
L V+ ++ Q V+V DVAAAI A DP GKIY+ GP ++ + EL
Sbjct: 178 LPVF--APDSPLQVVHVDDVAAAITKALLDPSEFGGKIYELAGPDKWTMMEL 227
>gi|182678291|ref|YP_001832437.1| NADH dehydrogenase (ubiquinone) [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634174|gb|ACB94948.1| NADH dehydrogenase (ubiquinone) [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 336
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 119/244 (48%), Gaps = 10/244 (4%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR 76
G + TVFG SG++G ++ L + G ++ + R L+ G +GQ+ + R
Sbjct: 8 TGRLVTVFGGSGFIGRHVVRALARDGWRVRVAARRPDLAF-HLQPAGQVGQIHAVQANLR 66
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ A++ ++ V+NL+G + E LA ++E G+ F+HISA+
Sbjct: 67 YPQSLALALRNADAVVNLVGIMNPIGKQQFSSIQAEGARALATATREAGIHNFVHISAIG 126
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
A+PN + Y RTK QGE + PE IFRPS ++G D F + M R V
Sbjct: 127 ANPNSSSVY-------ARTKAQGEAAIHEILPEGIIFRPSIVFGPEDNFFNRFAAMAR-V 178
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
L + G+ + QPV+VGDVA A+ AA AG Y+ GP+ L ++L++
Sbjct: 179 SPALPLIGGGKTKL-QPVFVGDVAKAVTAALGGAAKAGTTYELGGPEIRSLRQILEFILA 237
Query: 257 VMKK 260
++
Sbjct: 238 TTER 241
>gi|340027819|ref|ZP_08663882.1| NAD-dependent epimerase/dehydratase [Paracoccus sp. TRP]
Length = 330
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 12/231 (5%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G + + +G +I + R Y+ +R G GQV P + R+D
Sbjct: 6 LVTIYGGSGFLGRQIARIMAAEGWRIRVAVR-RPYEAGVVRTYGAPGQVEPVPCNVRDDM 64
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ + ++ VIN +G T + E R+AR++ E GV+ F+H+SAL ADP
Sbjct: 65 SVAACMADADAVINCVGIMVREGKNTFDTIHEEAAGRVARIAAETGVKHFVHVSALGADP 124
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ + Y + +K +GE EVL P+A I RPS ++G+ D+F + R
Sbjct: 125 DAASNYAA-------SKGRGEAEVLTHRPDAVILRPSIIFGTDDRFYNRIASLTRL---G 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
++ G T QPV+V DVA A V A +A IY+ GP + ++
Sbjct: 175 PFLFVPGARTEVQPVHVLDVARAAVMAASG-EAGSGIYELGGPDVLTMRDV 224
>gi|293603638|ref|ZP_06686059.1| NAD-dependent epimerase/dehydratase [Achromobacter piechaudii ATCC
43553]
gi|292818074|gb|EFF77134.1| NAD-dependent epimerase/dehydratase [Achromobacter piechaudii ATCC
43553]
Length = 306
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 111/242 (45%), Gaps = 33/242 (13%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVL----FQPYHPRND 78
V G +G++G +L +L QII+P R L G QVL +D
Sbjct: 5 VIGGTGFIGRHLIARLSGDLHQIIVPTR--------LLARGSELQVLPTTTLIQTDIHDD 56
Query: 79 DEIRKAIKYSNVVINLIGREFATKN----FTIADANVEIPARLARLSKEMGVEKFIHISA 134
+ + + + V+NL+G A A+V +P R+AR + GV + +HISA
Sbjct: 57 AVLDRLVSGCDAVVNLVGILHGNVGKPYGSAFARAHVHLPQRIARACQRHGVRRLLHISA 116
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA-----TIFRPSDMYGSGDKFLRYY 189
L AD G S + R+K GE + EFP TIFRPS ++G D F
Sbjct: 117 LGADSQ-------GDSMYQRSKGDGEAAIKAEFPSDNDSGWTIFRPSVIFGPDDNFT--- 166
Query: 190 GHMWRHVFRKLAVYK-KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+M+ + R L V G QPVYVGDV AA+ A D GK Y+ GP+ Y L
Sbjct: 167 -NMFASLARWLPVLPLAGAHARMQPVYVGDVVAAMATALADNHTCGKTYELGGPQVYTLG 225
Query: 249 EL 250
E+
Sbjct: 226 EI 227
>gi|83942106|ref|ZP_00954568.1| NADH ubiquinone oxidoreductase, putative [Sulfitobacter sp. EE-36]
gi|83847926|gb|EAP85801.1| NADH ubiquinone oxidoreductase, putative [Sulfitobacter sp. EE-36]
Length = 327
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 118/237 (49%), Gaps = 16/237 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TV+G SG++G Y+ ++ G ++ + R + +R G +GQV + R+D
Sbjct: 4 LVTVYGGSGFVGRYIVRRMALAGWRVRVAVR-RPNEALFVRTYGTVGQVEPVFCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R A++ ++ V+N +G T + R+ARL+ G+ + + ISA+ AD
Sbjct: 63 SVRDALQGADAVVNCVGILAEAGKNTFDAIQADGAERIARLAAAEGITRLVQISAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
S++ +TK GE VL+ P+A I RPS ++G D F + M R
Sbjct: 123 EAD-------SEYAQTKAMGEAGVLKHMPQAVILRPSIVFGPEDDFFNRFAGMTRI---S 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD 252
A+ G +T+ QPVYV DVA A A AAG IY+ GP+ R L+ +LD
Sbjct: 173 PAIPAVGADTLFQPVYVDDVAHAAELAVTGKAAAG-IYELGGPEVESFRGLMQRMLD 228
>gi|254511553|ref|ZP_05123620.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodobacteraceae
bacterium KLH11]
gi|221535264|gb|EEE38252.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodobacteraceae
bacterium KLH11]
Length = 327
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 121/239 (50%), Gaps = 22/239 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ +G ++ + R + +R G +GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMASEGWRVRVAVR-RPNEAMFVRPYGVVGQVEPILCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A++ ++ V+N +G E F A E R+ARL+ G+ + +HISA+ A
Sbjct: 63 SVAAAMQGADAVVNCVGVLNEIGKNEFGAVQA--EGAERIARLAATQGIARMVHISAIGA 120
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV- 196
DP S + RTK QGE VL+ P A I RPS ++G+ D+F + M R
Sbjct: 121 DPGSD-------SDYARTKAQGEAGVLQHMPGAVILRPSVIFGTEDQFFNRFAGMARMSP 173
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELL 251
F L G +T QPV+V DVA A V AG +Y+ GP+ R L+ ++L
Sbjct: 174 FLPLV----GADTRFQPVHVDDVAQAAVQGVLGRAVAG-VYELGGPEVQTFRALMQQML 227
>gi|187925707|ref|YP_001897349.1| NADH dehydrogenase [Burkholderia phytofirmans PsJN]
gi|187716901|gb|ACD18125.1| NADH dehydrogenase [Burkholderia phytofirmans PsJN]
Length = 317
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 124/245 (50%), Gaps = 23/245 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQV-LFQPYHPRNDD 79
+ G SG++GS+L N L + G + I R Y+ R L L D+ + +F P
Sbjct: 7 AIIGGSGFIGSHLVNALVEMGKDVRIATRRR-YNARHLTLLPIDVIEADVFDPV------ 59
Query: 80 EIRKAIKYSNVVINLI----GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
++ + ++ ++ VINL+ G+ A +VE+P ++ + GV + +HISAL
Sbjct: 60 QLARFVEGADCVINLVATLHGKRGTPYGPEFARMHVELPTKIVAACEGKGVHRLLHISAL 119
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADPN P+ Y R+K GEK V TIFRPS ++G D+FL + + R
Sbjct: 120 GADPNGPSMYT-------RSKGDGEKAVHAANLAWTIFRPSVVFGPEDQFLNKFAVLQR- 171
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+F + + + QPVYVGDVA AIV A+G+ Y+ GP Y L EL+ +
Sbjct: 172 MFPVIPLAMPDAKF--QPVYVGDVAKAIVNVLDLDAASGRTYELGGPTVYSLEELVKYCG 229
Query: 256 VVMKK 260
V+ K
Sbjct: 230 DVIGK 234
>gi|114763606|ref|ZP_01443011.1| NADH ubiquinone oxidoreductase, putative [Pelagibaca bermudensis
HTCC2601]
gi|114543886|gb|EAU46898.1| NADH ubiquinone oxidoreductase, putative [Roseovarius sp. HTCC2601]
Length = 327
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K G ++ + R + ++ G +GQV + RND+
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKLGWRVRVAVR-RPNEAIFVKPYGVVGQVEPVLCNIRNDE 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R ++ ++ V+N +G A E R+AR++ E GV + + ISA+ AD
Sbjct: 63 SVRMVMQGADAVVNCVGTFDARGKNNFDAIQAEGAERVARIAAEQGVARMVQISAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
S + RTK +GE VL P+A I RPS ++G+ D+F + M R
Sbjct: 123 ES-------NSDYARTKGEGEAAVLSLMPDAVILRPSVIFGAEDQFFNRFAGMSRM---G 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
+ G +T QPVYV DVA A V +AA +Y+ GP R +L+ V++
Sbjct: 173 PVLPLVGADTNFQPVYVDDVAQAAVMGATG-EAAPGVYELGGPDRESFRDLIGEMLSVIR 231
Query: 260 K 260
+
Sbjct: 232 R 232
>gi|119713550|gb|ABL97602.1| NADH-ubiquinone oxidoreductase [uncultured marine bacterium
EB0_39F01]
gi|161170302|gb|ABX59272.1| predicted nucleoside diphosphate sugar epimerase [uncultured marine
bacterium EB000_55B11]
gi|297183830|gb|ADI19953.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 330
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 124/243 (51%), Gaps = 16/243 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G Y+ ++ K+G ++ + R + ++ GD+GQV + R++
Sbjct: 7 LVTIFGGSGFVGRYVAQRMAKEGWRVRVAVR-RPNEALFVKTYGDVGQVEPILANIRDEK 65
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
R AI ++ V+N +G T D + +++A+L+ E GV+ F+H SA+ AD
Sbjct: 66 STRAAIIGADAVVNCVGILNETSKQKFTDLQSKGASQIAKLATECGVKTFVHFSAIGADI 125
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N + Y+ ++K +GE+ V F A I RPS ++G+ D+F + M K
Sbjct: 126 NSHSKYL-------KSKAEGEEMVKASFKNAVILRPSIVFGAEDQFFNRFATMA-----K 173
Query: 200 LA--VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
L+ + G ET QPVYV D+A A V G IY+ GP+ EL+ +
Sbjct: 174 LSPLIPLVGGETKFQPVYVDDIAKAAVKGVLGEAKRG-IYELGGPQAASFKELIIMLMGI 232
Query: 258 MKK 260
+++
Sbjct: 233 IRR 235
>gi|406707634|ref|YP_006757986.1| NAD dependent epimerase/dehydratase family protein [alpha
proteobacterium HIMB59]
gi|406653410|gb|AFS48809.1| NAD dependent epimerase/dehydratase family protein [alpha
proteobacterium HIMB59]
Length = 309
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 125/241 (51%), Gaps = 12/241 (4%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
VFG++G++G L +L GS++I P R R++ L GD+GQ+ + +N D I
Sbjct: 8 VFGSTGFIGRSLTKRLLANGSRLICPVRNPNRVKRNI-LSGDIGQIDVVEFDIQNLDAIE 66
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ I+ +VV+NL+G + NF+ A+ +P ++A +++ + F+HIS+L +
Sbjct: 67 RLIENCDVVVNLVGLLYEKNNFSFELAHFLLPKKIATYAEKYH-KPFVHISSLGS----- 120
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
TY S + +K GE+ + I RPS +YG D F+ +G M + + L +
Sbjct: 121 TY--QSNSNYLVSKKMGEEFIQSNNNNYIIIRPSVVYGEEDNFINQFGRMAK-ILPFLPL 177
Query: 203 YKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
+KKG ET QP+YV D++ I + D + AVG + + E+L ++K
Sbjct: 178 FKKG-ETKFQPIYVNDLSLMIFNLINNFDNYKNQNISAVGQEVFTFKEILSHIFNSLQKK 236
Query: 262 E 262
E
Sbjct: 237 E 237
>gi|294675722|ref|YP_003576337.1| NAD-dependent epimerase/dehydratase [Rhodobacter capsulatus SB
1003]
gi|294474542|gb|ADE83930.1| NAD-dependent epimerase/dehydratase family protein [Rhodobacter
capsulatus SB 1003]
Length = 325
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 111/208 (53%), Gaps = 17/208 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY--HPRN 77
+ T++G SG++G Y+ ++ K+G ++ + R + ++ G +GQV +P+ + R+
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEALFVKPYGAVGQV--EPFFCNIRD 60
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
D +R A++ ++ V+N +G T D + R+AR++ E+GV K +HISA+ A
Sbjct: 61 DASVRTAMQGADAVVNCVGILVNEGRNTFMDVQADGAGRIARIAAELGVSKLVHISAIGA 120
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH-V 196
D + Y RTK GE VL+ FP+A I RPS ++G+ D F + M +
Sbjct: 121 DNESDSAY-------SRTKGWGELAVLKSFPKAVILRPSVIFGTEDGFFNRFAAMAKFGP 173
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIV 224
F + T QPVYV DVAAA V
Sbjct: 174 FLPIT----APLTKFQPVYVDDVAAAAV 197
>gi|329904553|ref|ZP_08273859.1| NAD-dependent epimerase/dehydratase [Oxalobacteraceae bacterium
IMCC9480]
gi|327547913|gb|EGF32663.1| NAD-dependent epimerase/dehydratase [Oxalobacteraceae bacterium
IMCC9480]
Length = 325
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 119/241 (49%), Gaps = 25/241 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++GS+L +L QG +I+P R R L + + +++ H + +
Sbjct: 10 VLGGTGFVGSHLVAQLVAQGRHVIVPTR-RAIRARHLAVLPTV-EIVETDIH--QEQALA 65
Query: 83 KAIKYSNVVINLIGREF--------ATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
+ + ++ VINL+G A+ A A+VE+P R+ GV++F+H+SA
Sbjct: 66 RLMGRTDAVINLVGVLHSRPVNGGAASYGPDFARAHVELPIRIVAACGVAGVKRFLHMSA 125
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP--EATIFRPSDMYGSGDKFLRYYGHM 192
L AD N P+ Y+ R+K GE + R P T+FRPS ++G D FL + M
Sbjct: 126 LGADRNAPSMYL-------RSKAAGE-DAARSHPAVATTVFRPSVVFGEDDAFLNMFAGM 177
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
R + G + QP+YV DVA A V A + GK+Y+ GP+ + L EL+
Sbjct: 178 QRWF---PVIPLGGADARFQPIYVEDVAQAFVNALDNQHTVGKVYELGGPEVFTLRELVQ 234
Query: 253 W 253
Sbjct: 235 L 235
>gi|315499090|ref|YP_004087894.1| nad-dependent epimerase/dehydratase [Asticcacaulis excentricus CB
48]
gi|315417102|gb|ADU13743.1| NAD-dependent epimerase/dehydratase [Asticcacaulis excentricus CB
48]
Length = 321
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 10/242 (4%)
Query: 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY 73
S + + TVFG SG++G + L ++G ++ + R Y DL+ G +GQ+
Sbjct: 2 SQLSSRLVTVFGGSGFVGKQVVRALAQKGWRVRVAVRKPTY-AYDLKPLGTVGQIQVVRC 60
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
R + +++ A+ ++ V+NL+G + T + + +A + + GV F+ +S
Sbjct: 61 DVRKESDVQAALSGASAVVNLVGILYQTPGASFDAVHRAASKAIAEGAAKRGVSDFVQMS 120
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
AL ADP + Y S TK + E+ V P A I RPS ++G D F
Sbjct: 121 ALGADPKSSSKYAS-------TKGKAEEAVRAAIPSAVIVRPSVIFGPQDGFFTGLAEQI 173
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ ++ G +T QPVYVGDVA AI +P AG+ ++ GP+ + ++L+ +
Sbjct: 174 KTFPVMPSI--GGGKTKFQPVYVGDVARAIADTLGNPAFAGQTFELGGPETFTFNDLIKY 231
Query: 254 FH 255
Sbjct: 232 VS 233
>gi|126728022|ref|ZP_01743838.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Sagittula stellata
E-37]
gi|126710987|gb|EBA10037.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Sagittula stellata
E-37]
Length = 327
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 118/242 (48%), Gaps = 13/242 (5%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G Y+ ++ K+G ++ + R + ++ G +GQV + R+DD
Sbjct: 4 LVTIFGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEALFVKPYGVVGQVEPVFCNIRDDD 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R A ++ V+N +G + E R+AR++KE G+++ +HISA+ AD
Sbjct: 63 SVRAATAGADAVVNCVGTFDISGKNNFDAVQAEGATRIARITKERGIDRMVHISAIGADT 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ Y S +K +GE VL P+A I RPS ++G D F + M R
Sbjct: 123 EARSAYAS-------SKGEGEAGVLEHMPDAVILRPSVIFGPEDDFFNRFATMTRF---G 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL-DWFHVVM 258
+ G ET Q VYV DVA A V G +Y+ GP EL+ D V+
Sbjct: 173 PVLPLVGAETRFQTVYVDDVARAAVMGILGQSKPG-VYELGGPDVMTFRELMKDMLKVIH 231
Query: 259 KK 260
++
Sbjct: 232 RR 233
>gi|119896786|ref|YP_931999.1| putative NADH dehydrogenase [Azoarcus sp. BH72]
gi|119669199|emb|CAL93112.1| putative NADH dehydrogenase [Azoarcus sp. BH72]
Length = 322
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 117/249 (46%), Gaps = 22/249 (8%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G SG++GS + N+L + IP R L L Q+L H + +
Sbjct: 7 VLIGGSGFVGSVIANRLSAAAIDLCIPTRRPARAAHLLPL--PTAQILEADVH--DPVTL 62
Query: 82 RKAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ ++ ++ V+NL+G R + A A+VE+P +L + GV + IHISAL A
Sbjct: 63 ARLLEGADAVVNLVGILHSRPGSPYGRDFARAHVELPRKLVSACRSAGVRQLIHISALGA 122
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA--TIFRPSDMYGSGDKFLRYYGHMWRH 195
+P+ G S++ R+K GE E+ + T+ RPS ++G D+FL + +
Sbjct: 123 NPD-------GPSEYQRSKAAGEAEIHAAGDDVMWTVLRPSVIFGRADRFLNLFADL--- 172
Query: 196 VFRKLAVYK-KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
R L V G T QPVYV DVA + DP A + ++ GP Y L EL+++
Sbjct: 173 -ARTLPVLPLAGARTRFQPVYVEDVAEVVWRCLGDPACARETFEVAGPTVYTLRELVEYV 231
Query: 255 HVVMKKGEP 263
+ P
Sbjct: 232 SALAGHPRP 240
>gi|329847603|ref|ZP_08262631.1| NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9
[Asticcacaulis biprosthecum C19]
gi|328842666|gb|EGF92235.1| NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9
[Asticcacaulis biprosthecum C19]
Length = 323
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 14/234 (5%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR--GNFYDVRDLRLCGDLGQVLFQPYHPRN 77
V TVFG SG++G + L + ++ + R YDV+ + GD+GQ+ R
Sbjct: 4 VVTVFGGSGFLGKQVVRLLARSNWRVRVAVRHLAMAYDVKPM---GDVGQIQVVRCDVRR 60
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
D EI A+K ++ +NL+G + T + + ++A++ G++ F+ +SAL A
Sbjct: 61 DSEIEAALKGADACVNLVGLLYETLSAKFDAVHRHAATKMAQICAAKGIKDFVQVSALGA 120
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DP + Y S E V + P A I RPS ++G GD F + +F
Sbjct: 121 DPKSSSAYASSKG-------WAEDGVRKAIPTAVIIRPSIIFGQGDGFFTMLAAQLK-LF 172
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ + G E QPVYVGDVA A+ + A GK+Y+ GP+ + +L+
Sbjct: 173 PVIPAF-GGAENKFQPVYVGDVAGAVAKTLGNASAYGKVYELGGPEVFAFKDLI 225
>gi|186477647|ref|YP_001859117.1| NADH dehydrogenase [Burkholderia phymatum STM815]
gi|184194106|gb|ACC72071.1| NADH dehydrogenase [Burkholderia phymatum STM815]
Length = 318
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 125/246 (50%), Gaps = 24/246 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQV-LFQPYHPRNDD 79
V G SG++GS+L N L + G + I R Y+ R L L D+ + +F P
Sbjct: 7 AVIGGSGFIGSHLVNALVEIGKTVRIATRRR-YNARHLTLLPIDVVETDVFDPI------ 59
Query: 80 EIRKAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
++ + ++ ++ V+NL+G R A A+VE+P R+ + V + IH+SA+
Sbjct: 60 QLARFVEGADAVVNLVGVLHGRRGDPYGPEFAKAHVELPTRIVSACEGKSVHRLIHVSAI 119
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEV-LREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
ADP P+ Y+ R+K GE+ + +TIFRPS ++G D+FL + + R
Sbjct: 120 GADPRGPSMYL-------RSKGDGERAIHASSMLASTIFRPSVVFGPEDQFLNKFAFLQR 172
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+F + + K G QP++VGDVA AIV + G+ Y+ GP Y L L+++
Sbjct: 173 -MFPVIPLAKAGARF--QPIFVGDVAKAIVNVLDLDASTGRTYELGGPSVYTLEALVEYC 229
Query: 255 HVVMKK 260
V+ K
Sbjct: 230 GDVIGK 235
>gi|255264445|ref|ZP_05343787.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Thalassiobium sp.
R2A62]
gi|255106780|gb|EET49454.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Thalassiobium sp.
R2A62]
Length = 325
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 17/235 (7%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T++G SG++G Y+ ++ + G ++ + R + ++ G +GQV + R+D +
Sbjct: 6 TIYGGSGFVGRYVARRMAQAGWRVRVAVR-RPNEAMFVKPYGAVGQVEPIFCNIRDDASV 64
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
A++ ++ V+N +G T+ + E R+AR++ GV++ +HISA+ AD N
Sbjct: 65 AAAMQGADAVLNCVGILAETRRQSFEAVQAEGAGRVARIAAATGVDRMVHISAIGADANA 124
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
+ Y +TK GEK VL P A I RPS ++G D F + M R
Sbjct: 125 DSTY-------SQTKAAGEKAVLEAMPNAMIVRPSIVFGPEDDFFNRFASMSRF---GPV 174
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD 252
+ G +T QPVYV DVA A V DA+G IY+ GP R L++++L+
Sbjct: 175 LPVVGADTKFQPVYVDDVAQAAVMGVTG-DASG-IYELGGPDVASFRELMTQMLE 227
>gi|75674365|ref|YP_316786.1| NAD-dependent epimerase/dehydratase [Nitrobacter winogradskyi
Nb-255]
gi|74419235|gb|ABA03434.1| NAD-dependent epimerase/dehydratase [Nitrobacter winogradskyi
Nb-255]
Length = 353
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 117/247 (47%), Gaps = 11/247 (4%)
Query: 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY 73
+S + + TVFG SG++G Y+ L K+ +I + R L+ G +GQ+
Sbjct: 33 ASNSDTLVTVFGGSGFLGRYVVRALAKRDYRIRVGVRRPEL-AGHLQPLGKVGQIHAVQV 91
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
+ R+ +R A++ S V +NL+G + T DA V A + + +H+S
Sbjct: 92 NLRHPASVRAAMRGSEVAVNLVGILTKSGRQTF-DAVVAKGAATVAETAAAAGARLVHVS 150
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ ADP + S + R K GEK VL P ATI RPS M+G D+F + +
Sbjct: 151 AIGADP-------ASASAYARAKASGEKAVLAAVPSATILRPSVMFGPEDQFANRFAAL- 202
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ + G T QPV+VGDVA A+ A AG +Y+ GP + E++
Sbjct: 203 -ALISPMLPLIGGGATRMQPVHVGDVATAVADAVDGRTKAGAVYELGGPDVLSMREIMRI 261
Query: 254 FHVVMKK 260
V+++
Sbjct: 262 ILRVIER 268
>gi|114769805|ref|ZP_01447415.1| NADH-ubiquinone oxidoreductase [Rhodobacterales bacterium HTCC2255]
gi|114549510|gb|EAU52392.1| NADH-ubiquinone oxidoreductase [alpha proteobacterium HTCC2255]
Length = 330
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 20/245 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G Y+ ++ K+G ++ + R + ++ GD+GQV + R++
Sbjct: 7 LVTIFGGSGFVGRYVAQRMAKEGWRVRVAVR-RPNEALFVKTYGDVGQVEPILANIRDEK 65
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
R AI ++ V+N +G E + + FT D + +++A+L+ E GV+ F+H SA+ A
Sbjct: 66 STRAAIIGADAVVNCVGILNETSKQKFT--DLQSKGASQIAKLATECGVKTFVHFSAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D N + Y+ ++K +GE+ V F A I RPS ++G+ D+F + M
Sbjct: 124 DINSHSKYL-------KSKAEGEEMVKASFKNAVILRPSIVFGAEDQFFNRFATMA---- 172
Query: 198 RKLA--VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
KL+ + G ET QPVYV D+A A V G IY+ GP+ EL
Sbjct: 173 -KLSPLIPLVGGETKFQPVYVDDIAKAAVKGVLGEAKRG-IYELGGPQAASFKELTIMLM 230
Query: 256 VVMKK 260
++++
Sbjct: 231 GIIRR 235
>gi|77163921|ref|YP_342446.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
gi|76882235|gb|ABA56916.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
Length = 320
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 17/249 (6%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
N + G +G++G +L + L +QG ++ + R ++ RDL + L + Y P
Sbjct: 1 MNIQTVCILGGTGFVGRWLSSHLVEQGYKVRVLTR-HWQRHRDLLVLPGLRLMETDVYDP 59
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
++ VINLIG E + ++P ++A++ + G+++ +H+S
Sbjct: 60 ---AQLAAQFNGCQSVINLIGILNEKGRNGHGFRQVHADLPEKVAQICLDTGIKRLLHMS 116
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVL---REFPEATIFRPSDMYGSGDKFLRYYG 190
ALNAD N G S + R+K +GE VL R+ E TIF+PS ++G GD F +G
Sbjct: 117 ALNADAN------QGASYYLRSKGEGENRVLALARQGLEVTIFQPSVIFGPGDSFFNRFG 170
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ + E PVYVGDVA A A D + + Y+ GPK Y L +L
Sbjct: 171 SLLK--LSPFIFPLACPEARLTPVYVGDVARAFARALSDKEDFSQSYELCGPKIYTLKQL 228
Query: 251 LDWFHVVMK 259
+++ V++
Sbjct: 229 VEYTAKVLE 237
>gi|86136837|ref|ZP_01055415.1| NADH ubiquinone oxidoreductase, putative [Roseobacter sp. MED193]
gi|85826161|gb|EAQ46358.1| NADH ubiquinone oxidoreductase, putative [Roseobacter sp. MED193]
Length = 329
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 123/242 (50%), Gaps = 13/242 (5%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K+G ++ I R + ++ G GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRIAVR-RPNEAMHVKPYGVPGQVEPVLCNIRDDV 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ A++ ++ V+N +G A T E AR+ARL+++ + + +HISAL AD
Sbjct: 63 SVAAAMQGADAVVNCVGVLNAHGKNTFDAVQAEGAARVARLAQQQDIGQLVHISALGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
G S++ RTK QGE+ V F A I RPS ++G+ D+F + M
Sbjct: 123 E-------GESEYARTKAQGEEAVRSNFANAVILRPSIIFGTEDEFFNRFAGM--ASLSP 173
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL-DWFHVVM 258
L KG +T+ QPVYV DVA A V G IY+ GP+ + L+ V+M
Sbjct: 174 LLPIAKG-KTLFQPVYVDDVARAAVQGVLGRAEPG-IYELGGPEVKSFAALMRQMCDVIM 231
Query: 259 KK 260
++
Sbjct: 232 RR 233
>gi|407972655|ref|ZP_11153568.1| NAD-dependent epimerase/dehydratase [Nitratireductor indicus C115]
gi|407431426|gb|EKF44097.1| NAD-dependent epimerase/dehydratase [Nitratireductor indicus C115]
Length = 324
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 115/237 (48%), Gaps = 19/237 (8%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T+FG +G++G +L L K+G ++ + R + L L G++GQV + RN I
Sbjct: 12 TIFGGTGFIGRHLVQALTKRGYRVRVACRNPNLAIHLLPL-GNVGQVYAVQANLRNRASI 70
Query: 82 RKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+A+ S+ VINL+G E ++F + AR + + H SA+ ADP
Sbjct: 71 DRAVAGSDHVINLVGILHESGRQSFNVLQ---NFGARAVAEAARAAGARLTHGSAIGADP 127
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N P S + RTK GE+ VL +A I RPS ++G DKF + +M R F
Sbjct: 128 NSP-------SDYARTKALGEQAVLETIKDAVIVRPSIVFGPEDKFFNRFANMAR--FSP 178
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD 252
G ET QPVYVGDVA + GKIY+ GP+ R + ++LD
Sbjct: 179 FIPLIGGGETKFQPVYVGDVAEVFARSVDGDLEGGKIYELGGPEVLTFRQCMEQMLD 235
>gi|398383791|ref|ZP_10541854.1| putative nucleoside-diphosphate sugar epimerase [Sphingobium sp.
AP49]
gi|397724236|gb|EJK84711.1| putative nucleoside-diphosphate sugar epimerase [Sphingobium sp.
AP49]
Length = 309
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 16/241 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T+FG G++G + L +G+++ I R + ++ G+LGQ F R D +
Sbjct: 7 TIFGGGGFLGRQVAQALMARGARVRIAQR-DLASAFKVKALGNLGQTQFVAADIRKPDTV 65
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ S++VINL+G + +F E A +A+ + GV +H+SA+ AD +
Sbjct: 66 ARALHGSDIVINLVG--ILSGDFDAVQH--EGAANVAKAAATAGVTALVHVSAIGADASS 121
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P+ Y R+K GE VL FP ATI RPS ++G D+FL + +
Sbjct: 122 PSAY-------GRSKAAGEAAVLAAFPTATIVRPSIIFGQEDQFLNRFAGVASS---GPV 171
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWFHVVMKK 260
V G T QPVYVGDVA AI A + P GK ++ GP+ + E+ W + +
Sbjct: 172 VPVIGANTKFQPVYVGDVAEAIANAAEQPGVHGGKTFELAGPQIMSMKEINAWVAKAIGR 231
Query: 261 G 261
G
Sbjct: 232 G 232
>gi|260429019|ref|ZP_05782996.1| NADH dehydrogenase [Citreicella sp. SE45]
gi|260419642|gb|EEX12895.1| NADH dehydrogenase [Citreicella sp. SE45]
Length = 327
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 121/241 (50%), Gaps = 12/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K G ++ + R + ++ G +GQV + R+DD
Sbjct: 4 LVTIYGGSGFVGRYVARRMAKLGWRVRVAVR-RPNEAIFVKPYGVVGQVEPVLCNIRDDD 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R ++ ++ V+N +G A + E R+AR++ E GV + + ISA+ AD
Sbjct: 63 SVRAVMQGADAVVNCVGTFDAKGKNSFDAVQHEGAERIARIAAEQGVARMVQISAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ + Y RTK GE+ VL+ P+A I RPS ++G D+F + M R
Sbjct: 123 DSASGY-------ARTKALGEEAVLKHMPDAVILRPSVIFGPDDQFFNRFASMSRM---G 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
+ G +T QPVYV DVA A V +AA +Y+ GP +L+ V++
Sbjct: 173 PVLPLVGADTKFQPVYVDDVAHAAVMGVTG-EAAPGVYELGGPDAESFRDLIGQMLSVIR 231
Query: 260 K 260
+
Sbjct: 232 R 232
>gi|91785578|ref|YP_560784.1| hypothetical protein Bxe_A0199 [Burkholderia xenovorans LB400]
gi|91689532|gb|ABE32732.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 317
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQV-LFQPYHPRNDD 79
+ G SG++GS+L N L + G + I R Y+ R L L D+ + +F P
Sbjct: 7 AIIGGSGFIGSHLVNALVEAGKDVRIATRRR-YNARHLTLLPIDVIEADVFDPV------ 59
Query: 80 EIRKAIKYSNVVINLI----GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
++ + ++ ++ VINL+ G+ A +VE+P ++ + GV + +H+SAL
Sbjct: 60 QLARFVEGADCVINLVATLHGKRGTPYGPEFARMHVELPTKIVAACEGKGVHRLLHVSAL 119
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADPN P+ Y R+K GEK V TIFRPS ++G D+FL + + R
Sbjct: 120 GADPNGPSMYT-------RSKGDGEKAVHAANLAWTIFRPSVVFGPEDQFLNKFAFLQR- 171
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+F + + + QPVYVGDVA AIV A G+ Y+ GP Y L +L+ +
Sbjct: 172 MFPVIPLAMPDAKF--QPVYVGDVAKAIVNVLDLDAAGGRTYELGGPTVYALEDLVKYCG 229
Query: 256 VVMKK 260
V+ K
Sbjct: 230 DVIGK 234
>gi|329888579|ref|ZP_08267177.1| NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9
[Brevundimonas diminuta ATCC 11568]
gi|328847135|gb|EGF96697.1| NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9
[Brevundimonas diminuta ATCC 11568]
Length = 334
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 125/254 (49%), Gaps = 14/254 (5%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC 62
R L G + F + TVFG SG++G+ + L ++G ++ + R N L +
Sbjct: 2 RPGLGVGASEMADFAPGLVTVFGGSGFIGTQVVRALARRGWRVRVAAR-NAKSAPVLHMA 60
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
GD+GQV + + +A++ ++ VINL+G F T +VE +A ++
Sbjct: 61 GDVGQVQVVRCDITDKAAVAEAVRGADAVINLVGILFETGGRKFQTLHVEGATNVAEAAR 120
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
G ++ HISAL AD N G + + RTK + E V FP A I RPS ++GSG
Sbjct: 121 AAGAKRLTHISALGADAN-------GKADYARTKGEAEAAVRAAFPGAVIVRPSIVFGSG 173
Query: 183 DKFLRYYGHM--WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAV 240
D+FL + M W V + G +T QPVYV D A AI A +AAG+ Y+
Sbjct: 174 DQFLNRFAAMATWSPVLPLIG----GGQTKFQPVYVADAAEAIARATVAAEAAGETYELG 229
Query: 241 GPKRYLLSELLDWF 254
GP + ++L +
Sbjct: 230 GPSVWTFEDILKFI 243
>gi|153008671|ref|YP_001369886.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi ATCC
49188]
gi|151560559|gb|ABS14057.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi ATCC
49188]
Length = 328
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 14 LVTVFGGSGFVGRAVVASLTKRGYRVRVAVRKPEVAYY----MAPLGNVGQIQMVQANVR 69
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
N + +K S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 70 NRASVEHVVKGSDHVVNLVGILAESGRQRFNTVQVLGAKNIAEAAKAAGI-RMTHLSSLA 128
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P S + RTK +GE VL PE+ I RPS ++G D+F + +M R
Sbjct: 129 ADVNSP-------SDYARTKGEGENAVLSVLPESVILRPSIIFGPEDRFFNRFANMAR-- 179
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+ A G +Y+ GP
Sbjct: 180 FSPFLPAIGGGETKLQPVYVGDVAEAVARAVDGKLMPGGVYELGGP 225
>gi|385207537|ref|ZP_10034405.1| putative nucleoside-diphosphate sugar epimerase [Burkholderia sp.
Ch1-1]
gi|385179875|gb|EIF29151.1| putative nucleoside-diphosphate sugar epimerase [Burkholderia sp.
Ch1-1]
Length = 317
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 122/245 (49%), Gaps = 23/245 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQV-LFQPYHPRNDD 79
+ G SG++GS+L N L + G + I R Y+ R L L D+ + +F P
Sbjct: 7 AIIGGSGFIGSHLVNALVEAGKDVRIATRRR-YNARHLTLLPIDVIEADVFDPV------ 59
Query: 80 EIRKAIKYSNVVINLI----GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
++ + ++ ++ VINL+ G+ A +VE+P R+ + GV + +H+ AL
Sbjct: 60 QLARFVEGADCVINLVATLHGKRGTPYGPEFARMHVELPTRIVAACEGKGVHRLLHVGAL 119
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADPN P+ Y R+K GEK V TIFRPS ++G D+FL + + R
Sbjct: 120 GADPNGPSMYT-------RSKGDGEKAVHAANLAWTIFRPSVVFGPEDQFLNKFAFLQR- 171
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+F + + + QPVYVGDVA AIV A G+ Y+ GP Y L +L+ +
Sbjct: 172 MFPVIPLAMPDAKF--QPVYVGDVAKAIVNVLDLDAAGGRTYELGGPTVYTLEDLVKYCG 229
Query: 256 VVMKK 260
V+ K
Sbjct: 230 DVIGK 234
>gi|346994832|ref|ZP_08862904.1| NADH ubiquinone oxidoreductase, putative [Ruegeria sp. TW15]
Length = 327
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 122/243 (50%), Gaps = 22/243 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G Y+ ++ +G ++ + R + +R G +GQV + R+D
Sbjct: 4 LVTIFGGSGFVGRYIARRMAAEGWRVRVAVR-RPNEAMFVRPYGAVGQVEPILCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A+ + V+N +G E F A+ R+ARL+ V++ +HISA+ A
Sbjct: 63 SVASAMHGVDAVVNCVGVLNELGKNAFDAVQADG--AERIARLAASNDVDRMVHISAIGA 120
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV- 196
D + S++ RTK QGE VL+ A I RPS ++G+ D+F + M R
Sbjct: 121 D-------LESDSEYARTKAQGEANVLQHMQGAVILRPSIIFGTEDQFFNRFAGMTRMSP 173
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD 252
F L G +T QPVYV DVA A V +AG +Y+ GP+ R L+ ++L+
Sbjct: 174 FLPLV----GADTKFQPVYVDDVAQAAVQGVLGKASAG-VYELGGPEVKSFRGLMQQMLE 228
Query: 253 WFH 255
H
Sbjct: 229 VIH 231
>gi|300313569|ref|YP_003777661.1| NADH-ubiquinone oxidoreductase [Herbaspirillum seropedicae SmR1]
gi|300076354|gb|ADJ65753.1| NADH-ubiquinone oxidoreductase protein [Herbaspirillum seropedicae
SmR1]
Length = 322
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 120/239 (50%), Gaps = 25/239 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G SG++G+ L LG ++++P R Y+ L + V+ H +D +
Sbjct: 8 VIGGSGFIGTRLVELLGSSTDYRVMVPTRR--YERAKHLLVSPVVTVVQANIH--DDAAL 63
Query: 82 RKAIKYSNVVINLIG-------REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
+ + ++VVINL+G R A +V +P R+ + GV++++H+SA
Sbjct: 64 ARLVAEADVVINLVGILQSRPARGGAAYGPDFERQHVLLPRRIVAACVQQGVKRYLHMSA 123
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP-EATIFRPSDMYGSGDKFLRYYGHMW 193
L AD P+ Y+ R+K GE+E L + IFRPS ++G GD FL +M+
Sbjct: 124 LCADAKGPSMYL-------RSKAAGEQEALSAPSLDVAIFRPSVVFGEGDNFL----NMF 172
Query: 194 RHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ R V G + QPVYVGDVA A V A P GK+++ GPK+Y L EL+
Sbjct: 173 AGLNRMFPVIPLGSPDARFQPVYVGDVAQAFVNALALPRLGGKVFELGGPKQYTLRELV 231
>gi|85705656|ref|ZP_01036753.1| NADH ubiquinone oxidoreductase, putative [Roseovarius sp. 217]
gi|85669646|gb|EAQ24510.1| NADH ubiquinone oxidoreductase, putative [Roseovarius sp. 217]
Length = 335
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 119/235 (50%), Gaps = 18/235 (7%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T++G SG++G Y+ ++ + G ++ + R + ++ G +GQV + R+D +
Sbjct: 14 TIYGGSGFVGRYIARRMAQAGWRVRVAVR-RPNEAIHVKPYGVVGQVEPVFCNIRDDASV 72
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADA-NVEIPARLARLSKEMGVEKFIHISALNADPN 140
R ++ ++ V+N +G F K DA E R+AR++ E+GV +HISA+ AD
Sbjct: 73 RAVMQGADAVVNCVG-TFDRKGKNSFDAIQAEGATRVARMAAEVGVAHLVHISAIGADAE 131
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
+ Y R+K GE +L+ FP A I RPS ++G D+F + M R
Sbjct: 132 SDSAY-------ARSKAAGEAGILKHFPGAVILRPSVIFGPEDQFFNRFAAMTRF---GP 181
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELL 251
+ G ET QPVYV DVA A V A G IY+ GP+ R L+ ++L
Sbjct: 182 VLPVVGAETRFQPVYVDDVAQAAVMGAMGQAAPG-IYELGGPEVASFRALMQQML 235
>gi|296447793|ref|ZP_06889707.1| NAD-dependent epimerase/dehydratase [Methylosinus trichosporium
OB3b]
gi|296254712|gb|EFH01825.1| NAD-dependent epimerase/dehydratase [Methylosinus trichosporium
OB3b]
Length = 334
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 138/294 (46%), Gaps = 27/294 (9%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPY 73
+G + TVFG SG++G ++ L + G +I + R F+ L+ G +GQ+
Sbjct: 8 SGRLVTVFGGSGFIGRHVVGALARDGWRIRVACRRPDLAFH----LQPLGKVGQIFPIQA 63
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
+ RN I A+K ++ V+NL+G + + + E +A ++ G F+ IS
Sbjct: 64 NLRNKASIAAAVKGADAVVNLVGILAEGGKQSFSALHAEGAKAVAEAAEAAGAIHFVQIS 123
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
AL AD + + Y RTK GE V FP A IFRPS ++G D F + M
Sbjct: 124 ALGADAHSTSVY-------ARTKAAGEAAVREAFPAAVIFRPSVVFGPEDDFFNRFATMA 176
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
R+ F + V GE T QPVYVGDVA A+ A AAG Y+ GP+ EL+ +
Sbjct: 177 RY-FPVIPVV--GEGTRFQPVYVGDVARAVALAVDGRAAAGATYELGGPEVKSFRELVQY 233
Query: 254 FHVVMKKGEPDYGYYRYDLRYDPVMPLKLFIN-----GLFPGYPMGHLTPERVE 302
V++ E D + L I GLFP + +TP++VE
Sbjct: 234 ---VLEVTERDRRILPMSFLAGKKVALITKIAGALSFGLFP--KLLSMTPDQVE 282
>gi|444311599|ref|ZP_21147204.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium M86]
gi|443485029|gb|ELT47826.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium M86]
Length = 328
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 14 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEIAYY----MAPLGNVGQIQMVQANVR 69
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + IK S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 70 HRGSVEHVIKGSDHVVNLVGILSESGRQRFNTVQVLGAKNIAEAAKAAGI-RMTHVSSLA 128
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P S + RTK +GEK +L P++ I RPS ++G D+F + +M R
Sbjct: 129 ADANSP-------SDYARTKAEGEKAILSVLPDSVILRPSIIFGPEDRFFNRFANMAR-- 179
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+ A G +Y+ GP
Sbjct: 180 FSPFLPAIGGGETKLQPVYVGDVAEAVARAVDGKLMPGGVYELGGP 225
>gi|302381883|ref|YP_003817706.1| NAD-dependent epimerase/dehydratase [Brevundimonas subvibrioides
ATCC 15264]
gi|302192511|gb|ADL00083.1| NAD-dependent epimerase/dehydratase [Brevundimonas subvibrioides
ATCC 15264]
Length = 329
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 124/245 (50%), Gaps = 18/245 (7%)
Query: 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY 73
S F+ + TVFG SG++G+ L K+G ++ + R + +DLR+ GD+GQ+ QP
Sbjct: 2 SEFSPGLVTVFGGSGFVGTQAVRALAKRGWRVRVAVR-KPHLAQDLRILGDVGQI--QPV 58
Query: 74 HPRND----DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129
R D ++ A+K ++ +NL+G F A+VE +A + GV +F
Sbjct: 59 --RCDITRPADVAAALKGADAAVNLVGLLFEAPGRGFDAAHVEGTRNIAGACEAAGVARF 116
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
+H+SA+ AD N Y R+K + E P+ I RPS ++G+GD FL +
Sbjct: 117 VHVSAIGADVNSEADY-------GRSKGEAEAAARTVKPDTVILRPSIVFGTGDGFLNRF 169
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
M L + G +T QPV+VGDVA AI + DAA + ++ GP+ + +
Sbjct: 170 AAM-AGTAPALPLIGGG-KTKFQPVWVGDVAEAIARSVTRIDAAARTFELGGPEVWSFKD 227
Query: 250 LLDWF 254
+L +
Sbjct: 228 ILKYI 232
>gi|83953161|ref|ZP_00961883.1| NADH ubiquinone oxidoreductase, putative [Sulfitobacter sp.
NAS-14.1]
gi|83842129|gb|EAP81297.1| NADH ubiquinone oxidoreductase, putative [Sulfitobacter sp.
NAS-14.1]
Length = 327
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 16/237 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TV+G SG++G Y+ ++ G ++ + R + +R G +GQV + R+D
Sbjct: 4 LVTVYGGSGFVGRYIVRRMALAGWRVRVAVR-RPNEALFVRTYGTVGQVEPVFCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R A++ ++ V+N +G T + R+ARL+ G+ + + ISA+ AD
Sbjct: 63 SVRDALQGADAVVNCVGILAEAGKNTFDAIQADGAERIARLAAAEGITRLVQISAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
S++ +TK GE VL+ P+A I RPS ++G D F + M R
Sbjct: 123 E-------ADSEYAQTKAMGEAGVLKHMPQAVILRPSIVFGPEDDFFNRFAGMTRI---S 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD 252
A+ G +T+ QPVYV DVA A A AG IY+ GP+ R L+ +LD
Sbjct: 173 PAIPAVGADTLFQPVYVDDVAHAAELAVTGKAPAG-IYELGGPEVESFRGLMQRMLD 228
>gi|239832666|ref|ZP_04680995.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium LMG
3301]
gi|239824933|gb|EEQ96501.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium LMG
3301]
Length = 333
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEIAYY----MAPLGNVGQIQMVQANVR 74
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + IK S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 75 HRGSVEHVIKGSDHVVNLVGILSESGRQRFNTVQVLGAKNIAEAAKAAGI-RMTHVSSLA 133
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P S + RTK +GEK +L P++ I RPS ++G D+F + +M R
Sbjct: 134 ADANSP-------SDYARTKAEGEKAILSVLPDSVILRPSIIFGPEDRFFNRFANMAR-- 184
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+ A G +Y+ GP
Sbjct: 185 FSPFLPAIGGGETKLQPVYVGDVAEAVARAVDGKLMPGGVYELGGP 230
>gi|393767108|ref|ZP_10355659.1| NADH dehydrogenase (ubiquinone) [Methylobacterium sp. GXF4]
gi|392727371|gb|EIZ84685.1| NADH dehydrogenase (ubiquinone) [Methylobacterium sp. GXF4]
Length = 406
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 20/245 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL----CGDLGQVLFQPYHP 75
+ T+FG SG++G ++ L K+G +I + R DL L G + Q++ +
Sbjct: 28 LVTIFGGSGFLGRHVVRALAKRGYRIRVAVRRP-----DLALFLQPLGKVNQIVAVQANL 82
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R + + +A + S+VVINL+G T + + A V+ A + + IH+SA+
Sbjct: 83 RYPESVARAAERSDVVINLVGILQETGSQSFARLQVD-GAAEIARAAARQGARMIHVSAI 141
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADP P+ Y RTK +GE V P+A +FRPS ++G GD F + + R
Sbjct: 142 GADPASPSLY-------ARTKAEGEARVFAACPDAVVFRPSLVFGPGDSFFNRFAGLARA 194
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ + G ++ QPV+VGDVA AI A GK+Y+ GP+ L L+ +
Sbjct: 195 L---PVLPLAGGQSRFQPVFVGDVAEAIARAVDGVVPGGKVYELGGPEVATLEHLVRYML 251
Query: 256 VVMKK 260
+++
Sbjct: 252 KTIQR 256
>gi|121606355|ref|YP_983684.1| NAD-dependent epimerase/dehydratase [Polaromonas naphthalenivorans
CJ2]
gi|120595324|gb|ABM38763.1| NAD-dependent epimerase/dehydratase [Polaromonas naphthalenivorans
CJ2]
Length = 318
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 19/231 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYR--GNFYDVRDLRLCGDLGQVLFQPYHPRNDDE 80
+FG +G++G+ +C KL + ++ + R N + L L D+ ++ +
Sbjct: 6 IFGGTGFVGTQVCEKLNRLQCRVTVATRRSDNARHLLPLPLV-DVAEIDLH-----DSAA 59
Query: 81 IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
+ + + V+NLI +++ +V+ P L R + GV + IHISAL A
Sbjct: 60 LAALVAGHDAVVNLIAILHGSED-AFQKVHVQWPLTLVRACRAAGVRRIIHISALGAS-- 116
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
+ S++ R+K +GE +L + T+ RPS M+G+ DKFL + + + VF +
Sbjct: 117 -----MDSASRYQRSKARGEAALLGSGLDVTVLRPSVMFGADDKFLNTFASL-QQVFPVI 170
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ G QPV+VGDVA A+V +D G++Y+A GP+ + L EL+
Sbjct: 171 PL--AGSRARFQPVWVGDVADAVVRCLQDDATIGEVYEACGPQVFTLKELV 219
>gi|398803174|ref|ZP_10562280.1| putative nucleoside-diphosphate sugar epimerase [Polaromonas sp.
CF318]
gi|398097053|gb|EJL87365.1| putative nucleoside-diphosphate sugar epimerase [Polaromonas sp.
CF318]
Length = 318
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 15/229 (6%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++G ++C KL + ++ + R + R L++ L V+ H + +
Sbjct: 6 LLGGTGFVGRHVCEKLARLQCRVTVVTRRQ-ANARHLQML-PLVDVVEADAH--DSSSLA 61
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ + V+NL+ ++ A+V++P LAR + G+ + +HISAL A P P
Sbjct: 62 PLLAGHDAVVNLVAILHGSQA-AFDKAHVQLPLELARACEASGLRRIVHISALGASPGSP 120
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
+ Y R+K +GE +L + T+ RPS ++G+ DKFL + + + +F + +
Sbjct: 121 SMY-------QRSKARGEAVMLSTGLDVTVLRPSVIFGAEDKFLNTFARL-QQIFPVIPL 172
Query: 203 YKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ QPV+V DVA AIV +D D G+IY+ GP+ + L +L+
Sbjct: 173 --AAADARFQPVWVEDVADAIVHCLRDADTVGQIYEICGPEVFTLRQLV 219
>gi|383640714|ref|ZP_09953120.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingomonas
elodea ATCC 31461]
Length = 311
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 14/234 (5%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T+ G G++G Y+ +L G+++ + R D L+ G LGQ + +
Sbjct: 7 TLIGGGGFLGRYVAQELLAAGARVRVVER-KPRDAWFLKTQGGLGQTQLVVGDITRPETL 65
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A++ S+ V+N +G + +F +V+ +A + G +HISAL AD
Sbjct: 66 ARALQGSDAVVNFVG--ILSGDFE--KVHVDGARNVAEAASAAGAGALVHISALGADAAS 121
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P+ Y R+K GE+ VL FP ATI RPS ++G D F+ + M R +
Sbjct: 122 PSAY-------GRSKAAGEQAVLAAFPGATILRPSIVFGREDAFVNRFAGMIAGAPRGIV 174
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWF 254
+G ET QPV+V DVA A+ AA DP A GK Y GP ++ LL W
Sbjct: 175 PVVRG-ETRFQPVFVADVAQAVTAALADPAAHGGKTYALGGPDVLSMTGLLRWI 227
>gi|334345535|ref|YP_004554087.1| NAD-dependent epimerase/dehydratase [Sphingobium chlorophenolicum
L-1]
gi|334102157|gb|AEG49581.1| NAD-dependent epimerase/dehydratase [Sphingobium chlorophenolicum
L-1]
Length = 312
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 16/234 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG G++G + L +G+++ + R +R ++ G LGQ F R + +
Sbjct: 11 TVFGGGGFLGRQVAQALMARGARVRVAQRDLATALR-VKPLGGLGQTQFVAADIRKPESV 69
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+AI S++V+NL+G + +F ++ + A +A+ + GV+ +HISA+ AD
Sbjct: 70 ARAIAGSDIVVNLVG--VLSGDFE--GSHHDGAANVAKAAAAAGVKALVHISAIGADAQS 125
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
+ Y R+K GE+ V FP ATI RPS ++G D+FL + + R
Sbjct: 126 ASAY-------GRSKAAGEEAVKAAFPNATIVRPSIVFGPEDQFLNRFAEIVR---LAPV 175
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWF 254
V G T QPVYV DVA AI A ++P GK Y+ GP+ Y + EL W
Sbjct: 176 VPVIGATTKFQPVYVADVAQAIANAAENPGLHGGKTYELGGPQTYSMLELNAWI 229
>gi|170740480|ref|YP_001769135.1| NADH dehydrogenase (ubiquinone) [Methylobacterium sp. 4-46]
gi|168194754|gb|ACA16701.1| NADH dehydrogenase (ubiquinone) [Methylobacterium sp. 4-46]
Length = 381
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 13/240 (5%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G ++ L K+G +I + R + L+ G +GQ++ + R+ +
Sbjct: 16 TVFGGSGFLGRHVVRALAKRGYRIRVAVRRPDL-AQFLQPLGRVGQIVAVQANLRDPASV 74
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+++++VV+NL+G + N E P + + + +H+SA+ AD
Sbjct: 75 ARAVEHADVVVNLVGILQESGNQRFQRLQAEGPG-VIARAAAAIGARMVHVSAIGADAGS 133
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P+ Y R+K GE VL P+A I RPS ++G GD F + + V
Sbjct: 134 PSAY-------ARSKAAGEAGVLAARPDAVIVRPSIIFGHGDSFFNRFAAL---VGLLPV 183
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW-FHVVMKK 260
+ G ET QPV+VGDVA I A G Y+ GP+ L +L+++ V M++
Sbjct: 184 LPLAGAETRMQPVFVGDVAEVIALAVDGKARPGTTYELGGPEILTLRQLVEYTLQVTMRR 243
>gi|197103633|ref|YP_002129010.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Phenylobacterium
zucineum HLK1]
gi|196477053|gb|ACG76581.1| NADH-ubiquinone oxidoreductase 39 kDa subunit precursor
[Phenylobacterium zucineum HLK1]
Length = 325
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 10/233 (4%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G+ + +L K G +I + R N +RL GD+GQ+ + R+ D +
Sbjct: 6 TVFGGSGFVGTQVVRQLAKAGWRIRVAVR-NPSLGYAMRLHGDVGQIDVVQANIRDRDSV 64
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A++ + +NL+G + +V+ +A ++ GV + + +SAL A +
Sbjct: 65 ARALEGATASVNLVGVLYEAGRQGFQAVHVDGARTVAEVAAAEGVTRVVQMSALGAAADS 124
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
S++ RTK +GE V + P+A + RPS ++G D F + M + +
Sbjct: 125 -------ASKYARTKAEGEAAVRQVRPDAVVVRPSIVFGPEDGFFNKFASMAQ--VSPVL 175
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
G T QPV+VGDV AI D AAG+ Y+ G + EL+
Sbjct: 176 PLIGGGTTRFQPVFVGDVGKAIARMVTDSAAAGQTYELGGQAVFTFRELMQLM 228
>gi|254453637|ref|ZP_05067074.1| NADH-ubiquinone oxidoreductase [Octadecabacter arcticus 238]
gi|198268043|gb|EDY92313.1| NADH-ubiquinone oxidoreductase [Octadecabacter arcticus 238]
Length = 325
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 120/243 (49%), Gaps = 17/243 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TV+G SG++G Y+ +L K G ++ + R N + ++ G +GQV + R+D+
Sbjct: 4 LVTVYGGSGFVGRYIARRLAKDGWRVRVAVR-NPNEAMFVKPYGAVGQVEPVFCNIRDDE 62
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+R + S+ V+N +G E F A R+AR++ MGV + +SA+ A
Sbjct: 63 SVRSVMHGSDAVVNCVGVLDEIGKNTFEAVQAGG--AERIARIAALMGVRAMVQMSAIGA 120
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D + S++ RTK GE VL P A I RPS ++G D F + M R
Sbjct: 121 DADSE-------SEYARTKAAGEAGVLAHMPNAMILRPSIIFGDEDGFFNRFAGMSRF-- 171
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
+ G +T QPVYV DVAAA V + A +++ GP + + +L++ +
Sbjct: 172 -GPVLPIVGADTKFQPVYVDDVAAAAVMGVQ--GRATGVFELGGPSVHTMRKLMNEMLAI 228
Query: 258 MKK 260
+++
Sbjct: 229 IRR 231
>gi|359399815|ref|ZP_09192810.1| NADH dehydrogenase [Novosphingobium pentaromativorans US6-1]
gi|357598840|gb|EHJ60563.1| NADH dehydrogenase [Novosphingobium pentaromativorans US6-1]
Length = 373
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 118/238 (49%), Gaps = 16/238 (6%)
Query: 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY 73
+S G + TV G SG++G +L +L +G+++ I R N ++ G+LGQV F
Sbjct: 60 NSLAGKIVTVLGGSGFVGRHLAQELLSRGARLRIASR-NPQKAYAIKPLGNLGQVQFARV 118
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
D + A+ S+ V+NL+G + + + +A +K G F+HIS
Sbjct: 119 DVTRPDSLAAALAGSDAVVNLVG----AFSGNLDALQGKGAGAIAAAAKAAGASAFVHIS 174
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ + + Y RTK +GE+ V EFP ATI RPS ++G D F+ +G +
Sbjct: 175 AIGGNADSDVDY-------ARTKAEGEEAVRAEFPGATILRPSLLFGPDDNFVMMFGRLI 227
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSEL 250
F L V+ G E QP++V D A AI A +P A GK Y+ GP+ + EL
Sbjct: 228 -GAFPALPVF--GPEAKLQPLFVDDAAEAIANALGNPGAHGGKTYEIGGPEVITMLEL 282
>gi|390168241|ref|ZP_10220205.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
indicum B90A]
gi|389589121|gb|EIM67152.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
indicum B90A]
Length = 312
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 118/234 (50%), Gaps = 16/234 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG G++G + L +G+++ + R + ++ G LGQ F R + +
Sbjct: 11 TVFGGGGFLGRQVAQALMARGARVRVAQR-DLATALRVKPLGALGQTQFVAADIRKPESV 69
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+AI S++VINL+G + +F ++ + A +A+ + GV +HISA+ AD
Sbjct: 70 ARAIVGSDIVINLVG--VLSGDFE--GSHHDGAANVAKAAAAAGVRALVHISAIGADAQS 125
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P+ Y R+K GE+ V FP ATI RPS ++G D+FL + + R
Sbjct: 126 PSAY-------GRSKAAGEEAVKAAFPTATIIRPSIVFGPEDQFLNRFAEIIRLA---PV 175
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWF 254
V G T QPVYV DVA AI A ++P GK Y+ GP+ Y + EL W
Sbjct: 176 VPVIGANTRFQPVYVADVAQAIANAAENPGLHGGKTYELGGPQTYSMLELNAWI 229
>gi|163745259|ref|ZP_02152619.1| NADH-ubiquinone oxidoreductase, putative [Oceanibulbus indolifex
HEL-45]
gi|161382077|gb|EDQ06486.1| NADH-ubiquinone oxidoreductase, putative [Oceanibulbus indolifex
HEL-45]
Length = 328
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 120/240 (50%), Gaps = 16/240 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ + G ++ + R + + +R G +GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIAYRMARAGWRVRVAVR-HPNEALFVRTYGVVGQVEPVLCNIRDDG 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R A++ ++ V+N +G T R+AR++ GV++F+ +SA+ AD
Sbjct: 63 SVRDALRGADAVVNCVGILVETGKNGFDAVQSGGAERIARMAAGEGVDRFVQVSAIGAD- 121
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S + RTK +GE VL+ P A I RPS M+G+ D+F + M R
Sbjct: 122 ------MESDSDYARTKGEGEAAVLKHMPHAVILRPSIMFGAEDEFFNRFAGMTRT---G 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDWFH 255
+ G T QPV+V DVA A A + A+G +Y+ GP R L+ +L H
Sbjct: 173 PILPVAGAATRFQPVFVDDVAKAAETALEGRAASG-VYELGGPDVDTFRGLMQRMLHVIH 231
>gi|110677481|ref|YP_680488.1| NADH-ubiquinone oxidoreductase [Roseobacter denitrificans OCh 114]
gi|109453597|gb|ABG29802.1| NADH-ubiquinone oxidoreductase, putative [Roseobacter denitrificans
OCh 114]
Length = 327
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K G ++ + R + ++ G +GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKAGWRVRVAVR-RPNEAMFVKPYGVVGQVEPVLCNVRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R + ++ V+N +G T E R+AR++ + GV + +HISA+ AD
Sbjct: 63 SVRHVMMGADAVVNCVGILAEDSKNTFDTVQAEGAERIARIAAQEGVARMVHISAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S + RTK GE VL+ P A I RPS ++G D+F + M + +
Sbjct: 123 H-------SDSDYARTKALGEAGVLQHMPSAVILRPSIVFGPEDQFFNRFADMAK-LGPV 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDWFH 255
L V G ET QPVYV DVA A A + A G +Y+ GP R L+ +L+ H
Sbjct: 175 LPVV--GAETRFQPVYVDDVAQAAEKALTETVAPG-VYELGGPDVCSFRALMELMLETIH 231
>gi|313200252|ref|YP_004038910.1| nad-dependent epimerase/dehydratase [Methylovorus sp. MP688]
gi|312439568|gb|ADQ83674.1| NAD-dependent epimerase/dehydratase [Methylovorus sp. MP688]
Length = 315
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++GS + ++L G + + R + L L L V +D +R
Sbjct: 8 VLGGSGFVGSAIVHRLSAAGYLVKVLTRRREAS-KHLIL---LPNVQVVECDVMDDQALR 63
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ + VINLIG ++ + + E+P+RL +L ++GV + +H+SAL A P+ P
Sbjct: 64 THLTGCDGVINLIGILHESRKASFEAMHAELPSRLVQLCVKLGVCRLLHMSALQAAPDAP 123
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFP--EATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
+ Y+ R+K +GE VL TIFRPS ++G D FL + + + +
Sbjct: 124 SAYL-------RSKAKGEAAVLANADRLNVTIFRPSVIFGRNDSFLNLFASLVK--LMPV 174
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260
K + QPV+V DVA A A ++ + G++Y+ GP+ Y + EL+ + V+ K
Sbjct: 175 VALAKPQARF-QPVWVEDVAQAFTNAVENAETFGQVYELGGPRVYTMKELILFVAFVLGK 233
>gi|89901466|ref|YP_523937.1| NAD-dependent epimerase/dehydratase [Rhodoferax ferrireducens T118]
gi|89346203|gb|ABD70406.1| NAD-dependent epimerase/dehydratase [Rhodoferax ferrireducens T118]
Length = 319
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 25/244 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G+ +C KL QG + +P R + L G + + ++ +
Sbjct: 6 VLGGTGFVGTQVCQKLLSQGWHVTVPTRQRAHAQHLQPLSG----LTLLEFDVHDEAALT 61
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+A+ + V+NL+ + +V +P +LAR + GV++ +HISAL AD P
Sbjct: 62 QAVAGHDAVVNLVAILHGDQA-AFDRVHVALPKKLARACRAAGVKRVVHISALGADAQHP 120
Query: 143 TYYISGGSQFYRTKYQGEKEVLREF---PEA----TIFRPSDMYGSGDKFLRYYGHMWRH 195
S S + R+K QGE L+ P+A TIFRPS M+G+ DKFL + + +
Sbjct: 121 Q---SAPSMYLRSKGQGEAVWLQAAGVGPQAAFDLTIFRPSVMFGARDKFLNVFARL-QK 176
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIV-------AACKDPDAAGKIYQAVGPKRYLLS 248
V + + G QPV+V DVA+A+V A P A+ + +A GP+ + L
Sbjct: 177 VLPFMPLACAGARF--QPVWVDDVASAVVKSLMPGDAGVMAPAASPRTIEACGPEVFTLK 234
Query: 249 ELLD 252
+L+
Sbjct: 235 QLVQ 238
>gi|253998182|ref|YP_003050245.1| NAD-dependent epimerase/dehydratase [Methylovorus glucosetrophus
SIP3-4]
gi|253984861|gb|ACT49718.1| NAD-dependent epimerase/dehydratase [Methylovorus glucosetrophus
SIP3-4]
Length = 315
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++GS + ++L G + + R + L L L V +D +R
Sbjct: 8 VLGGSGFVGSAIVHRLSAAGYLVKVLTRRREAS-KHLIL---LPNVQVVECDVMDDQALR 63
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ + VINLIG ++ + + E+P+RL +L ++GV + +H+SAL A P+ P
Sbjct: 64 THLTGCDGVINLIGILHESRKASFEAMHAELPSRLVQLCVKLGVCRLLHMSALQAAPDAP 123
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFP--EATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
+ Y+ R+K +GE VL TIFRPS ++G D FL + + + +
Sbjct: 124 SAYL-------RSKAKGEAAVLANADRLNVTIFRPSVIFGRNDSFLNLFASLVK--LMPV 174
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260
K + QPV+V DVA A A ++ + G++Y+ GP+ Y + EL+ + V+ K
Sbjct: 175 VALAKPQARF-QPVWVEDVAQAFTNAIENAETFGQVYELGGPRVYTMKELILFVAFVLGK 233
>gi|163855208|ref|YP_001629506.1| NADH dehydrogenase [Bordetella petrii DSM 12804]
gi|163258936|emb|CAP41235.1| NADH dehydrogenase [Bordetella petrii]
Length = 306
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 118/238 (49%), Gaps = 23/238 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++G ++ +L G +I+P R + RDL+L L V + +D +
Sbjct: 5 LIGGTGFLGRHMAARLAGHGHVLIVPTR-QYGRGRDLQLLPTLTLVEADVH---DDAVLD 60
Query: 83 KAIKYSNVVINLIGREFATKN----FTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ ++ + VINL G + A +V++P R+A+ + GV + +H+SAL AD
Sbjct: 61 RLLRECDAVINLAGILHGGRGQPYGAGFARVHVQLPQRIAQACRRHGVRRLLHVSALGAD 120
Query: 139 PNPPTYYISGGSQFYRTKYQGE---KEVLREFPE--ATIFRPSDMYGSGDKFLRYYGHMW 193
+ P+ Y+ R+K GE +E +PE TIFRPS ++G D + +
Sbjct: 121 SSGPSMYL-------RSKGDGEAALREAYAAWPEGACTIFRPSVVFGPDDHLTTLFARLA 173
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
R + + G + QP+ V D+A A AA +P AG++Y GP+ Y L E++
Sbjct: 174 RWLP---VIPLAGADARMQPISVSDIAFAAEAALGNPHTAGRVYDLGGPQVYTLGEIV 228
>gi|121999110|ref|YP_001003897.1| NAD-dependent epimerase/dehydratase [Halorhodospira halophila SL1]
gi|121590515|gb|ABM63095.1| NAD-dependent epimerase/dehydratase [Halorhodospira halophila SL1]
Length = 320
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 125/237 (52%), Gaps = 19/237 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G ++ N+L +G +I R + + RDL L G LF+ ++ E+
Sbjct: 8 VVGGTGFVGMHVANRLADRGYRIRALTRRS-HRGRDLLLFP--GLRLFEA-DVHDERELV 63
Query: 83 KAIKYSNVVINLIGREFAT---KNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ + VINL G + + +V++P R+ ++ V + +H+SAL A P
Sbjct: 64 RHFSGCHAVINLAGAHTGRGGPREDAYHEVHVDLPRRVLAAARRASVPRLVHMSALGAHP 123
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPE---ATIFRPSDMYGSGDKFLRYYGHMWRHV 196
+ S+F RTK +GE+ VL P+ AT+ +PS ++G+GD+FL + + R
Sbjct: 124 DAV-------SRFLRTKGEGEQLVLAADPDEIGATVLQPSVIFGAGDRFLNRFAGLLR-- 174
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
F + + QPV+ GDVA A++ A +DP AG+ YQ GP+ Y L EL+++
Sbjct: 175 FAPGVFFLPTPDARLQPVFGGDVAQAVINATEDPRTAGQTYQLCGPQIYTLRELVEY 231
>gi|421485505|ref|ZP_15933064.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
piechaudii HLE]
gi|400196424|gb|EJO29401.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
piechaudii HLE]
Length = 302
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHPRND 78
+ G +G++G +L +L Q+I+P R G+ V V +D
Sbjct: 5 IIGGTGFIGRHLIARLSGGLHQMIVPTRLLARGSELQV--------FPTVTLVQTDIHDD 56
Query: 79 DEIRKAIKYSNVVINLIGREFATKN----FTIADANVEIPARLARLSKEMGVEKFIHISA 134
+ ++ +VV+NL+G A A+V +P R+A+ + GV + +H+SA
Sbjct: 57 AALDGLVRGCDVVVNLVGILHGNIGKPYGSDFARAHVLLPQRIAQACRRQGVHRLLHVSA 116
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA-----TIFRPSDMYGSGDKFLRYY 189
L AD G S + R+K GE + EF A TIFRPS ++G DKF
Sbjct: 117 LGADSQ-------GDSMYQRSKGDGEAAIKHEFQAASEGGWTIFRPSVLFGPDDKFT--- 166
Query: 190 GHMWRHVFRKLAVYK-KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+M+ + R L V G QPVYVGDV A+++A D GK Y+ GP+ Y L
Sbjct: 167 -NMFATLARWLPVLPLAGAHVRMQPVYVGDVVEAMMSALGDTHTCGKTYELGGPQVYTLG 225
Query: 249 EL 250
E+
Sbjct: 226 EI 227
>gi|404318468|ref|ZP_10966401.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi CTS-325]
Length = 328
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K G ++ + R +Y + G++GQ+ + R
Sbjct: 14 LVTVFGGSGFVGRGVVASLTKCGYRVRVAVRKPEVAYY----MAPLGNVGQIQMVQANVR 69
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
N + +K S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 70 NRASVEHVVKGSDHVVNLVGILAESGRQRFNTVQVLGAKNIAEAAKAAGI-RMTHLSSLA 128
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P S + RTK +GE VL PE+ I RPS ++G D+F + +M R
Sbjct: 129 ADVNSP-------SDYARTKGEGENAVLSVLPESVILRPSIIFGPEDRFFNRFANMAR-- 179
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+ A G +Y+ GP
Sbjct: 180 FSPFLPAIGGGETKLQPVYVGDVAEAVARAVDGKLMPGGVYELGGP 225
>gi|163794940|ref|ZP_02188909.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [alpha
proteobacterium BAL199]
gi|159179759|gb|EDP64286.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [alpha
proteobacterium BAL199]
Length = 317
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 10/240 (4%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
G + TVFGASG++G + +L +G+++ + + + LR G +GQ+
Sbjct: 1 MQGKLVTVFGASGFVGRNIVRELAARGARVNAACQ-DAERAKFLRTMGSVGQITPMRADV 59
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ + +AI +++VI+L+G + + T P +A+ + G IH+SA+
Sbjct: 60 TDPASVARAIVGADIVISLVGILYPSGRNTFEAVQETAPGTIAKAAAAAGATAMIHVSAI 119
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADP+ S++ RTK GE V FP ATI RPS ++G D F + M
Sbjct: 120 GADPD-------SRSRYARTKAAGEAAVRAAFPSATILRPSIVFGPDDSFFNRFAAMA-Q 171
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ L ++ G T QPVYV DVA A +A DAAG ++ GP Y +LL+
Sbjct: 172 ISPVLPLFGGG-STKFQPVYVDDVADAALAVLDRSDAAGATFELGGPTIYTFRQLLELMQ 230
>gi|334140472|ref|YP_004533674.1| NADH dehydrogenase [Novosphingobium sp. PP1Y]
gi|333938498|emb|CCA91856.1| NADH dehydrogenase [Novosphingobium sp. PP1Y]
Length = 320
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 132/281 (46%), Gaps = 24/281 (8%)
Query: 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH 74
S G + TV G SG++G +L +L +G+++ I R N ++ G+LGQV F
Sbjct: 8 SLAGKIVTVLGGSGFVGRHLAQELLSRGARLRIASR-NPQKAYAIKPLGNLGQVQFARVD 66
Query: 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
D + A+ S+ V+NL+G + + + +A +K G F+HISA
Sbjct: 67 VTRPDSLAAALAGSDAVVNLVG----AFSGNLDALQGKGAGAIAAAAKAAGASAFVHISA 122
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ + + Y RTK +GE+ + EFP ATI RPS ++G D F+ +G +
Sbjct: 123 IGGNADSDVDY-------ARTKAEGEEAIRAEFPGATILRPSLLFGPDDNFVMMFGRLI- 174
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDW 253
F L V+ G E QP++V D A AI A +P A GK Y+ GP+ + EL
Sbjct: 175 GTFPALPVF--GPEAKLQPLFVDDAAQAIANALGNPAAHGGKTYEIGGPEVITMLEL--- 229
Query: 254 FHVVMKKGEPDYGYYRYDLRY-DPVMPLKLFINGLFPGYPM 293
+ + K E G R + D V L G PG P+
Sbjct: 230 -NQRIAKAE---GRSRSFIALPDSVSELIASATGWLPGAPI 266
>gi|393724242|ref|ZP_10344169.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Sphingomonas sp.
PAMC 26605]
Length = 316
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 118/245 (48%), Gaps = 32/245 (13%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQPYHPRND 78
T+ G G++G Y+ L G+++ I R D R L+ G LGQ F
Sbjct: 7 TLIGGGGFLGRYVAQALLDSGARVRIAQR----DPRQAFFLKPLGGLGQTQFAVADITKP 62
Query: 79 DEIRKAIKYSNVVINLIG---REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ IR+A+ S+ V+NL+G +F K + A + A + GV +H+SA+
Sbjct: 63 ESIRRAVAGSDAVVNLVGILSGDF--KKIQVDGARIV-----AEAAAAAGVGALVHLSAI 115
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADP P+ Y R+K +GE V FP ATI RPS ++G D+F+ + M
Sbjct: 116 GADPASPSAY-------GRSKGEGEAAVRAAFPSATILRPSIVFGREDQFVNRFAAMVAT 168
Query: 196 -----VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD-AAGKIYQAVGPKRYLLSE 249
+ + V + G T QPVYVGDVA A++AA P+ AAGK + GP +
Sbjct: 169 AASMPLVHVVPVLRAG--TKFQPVYVGDVADAVMAALAHPELAAGKTLELGGPDILSMGA 226
Query: 250 LLDWF 254
L+ W
Sbjct: 227 LVRWI 231
>gi|56477348|ref|YP_158937.1| nucleoside-diphosphate-sugar epimerase [Aromatoleum aromaticum
EbN1]
gi|56313391|emb|CAI08036.1| predicted nucleoside-diphosphate-sugar epimerases [Aromatoleum
aromaticum EbN1]
Length = 321
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 20/248 (8%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G SG++GS + N+L ++++P R R L L + V + P +
Sbjct: 7 ALIGGSGFLGSAVANQLAGAAVEVVVPTR-RASRARHLLLLPTVDVVEADVHDPATLAHL 65
Query: 82 RKAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ + VINL+G R + A A+VE+P ++ V +H+SAL A
Sbjct: 66 VSGV---DAVINLVGILHSRSGSPYGRDFARAHVELPQKIVAACHAARVPHLVHVSALGA 122
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLR--EFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
P+ G S++ R+K GE + + P T+ RP+ M+G GD F + R
Sbjct: 123 SPD-------GPSEYLRSKAAGEAAIRASGDAPAWTVLRPAVMFGRGDHFTNLFA---RL 172
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
R + G QPV+V DVAA I +DP A G+ ++ GP+ Y L EL+++
Sbjct: 173 ATRFPLLPLAGARARFQPVHVEDVAAVICRCLRDPAAIGETFELAGPRVYTLRELVEYIS 232
Query: 256 VVMKKGEP 263
+ P
Sbjct: 233 ELASAPRP 240
>gi|270356864|gb|ACZ80651.1| putative NADH dehydrogenase [Filobasidiella depauperata]
Length = 383
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 10 TGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVL 69
TGGRS+ +G TVFG++G++ YL KL +QGSQ+++PYR + R LR CGDLGQ++
Sbjct: 54 TGGRSANSGHTVTVFGSTGFLARYLIQKLARQGSQVVVPYRDE-DEKRRLRPCGDLGQIV 112
Query: 70 FQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129
+ R ++ + N N E+
Sbjct: 113 PLEWDARIPEQTADPVYCRNCYRN---------------------------------ERP 139
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
S + P + +FYRTKY GE+ V FPEATI RPS ++G D L
Sbjct: 140 PSHSCFPSQRQPKIRH----PEFYRTKYAGERAVRDAFPEATIVRPSQLFGYEDWLL--- 192
Query: 190 GHMWRHVFRKLAVYKKGEETIKQ-PVYVGDVAAAIVAACKDP-DAAGKIYQAVGPKRYLL 247
+ R +YK + K PV+V DVA A+ P +A + GP+ Y
Sbjct: 193 ----NAIARYPILYKLNQGRTKLFPVHVVDVAEALNKMLNAPVTSAASTFALPGPELYSF 248
Query: 248 SEL 250
+EL
Sbjct: 249 AEL 251
>gi|424889018|ref|ZP_18312621.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393174567|gb|EJC74611.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 326
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 115/248 (46%), Gaps = 19/248 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R + I +A+ ++ V+N +G T T DA E AR + HISA+
Sbjct: 64 RYRNSIDRAVDGADHVVNCVGILHETGRNTF-DAVQEFGARAVAEAARGAGATLAHISAI 122
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
A+ N + Y RTK + E +L P+A IFRPS ++G D F + M R
Sbjct: 123 GANANSDSGY-------GRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFADMAR- 174
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ G +T QPVYV DVA A+ A A GKIY+ GP+ E L+
Sbjct: 175 -MSPVLPLVGGGKTKFQPVYVEDVAEAVARAVDGTVAGGKIYELGGPEVLSFRECLEMML 233
Query: 256 VVMKKGEP 263
V + P
Sbjct: 234 KVTSRKNP 241
>gi|390574925|ref|ZP_10255035.1| NADH dehydrogenase [Burkholderia terrae BS001]
gi|420256056|ref|ZP_14758920.1| putative nucleoside-diphosphate sugar epimerase [Burkholderia sp.
BT03]
gi|389933166|gb|EIM95184.1| NADH dehydrogenase [Burkholderia terrae BS001]
gi|398043955|gb|EJL36816.1| putative nucleoside-diphosphate sugar epimerase [Burkholderia sp.
BT03]
Length = 318
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 124/246 (50%), Gaps = 24/246 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQV-LFQPYHPRNDD 79
+ G SG++GS+L N L + G + I R Y+ R L L D+ + +F P
Sbjct: 7 AIVGGSGFIGSHLVNALVELGKTVRIATRRR-YNARHLTLLPIDVIETDVFDPI------ 59
Query: 80 EIRKAIKYSNVVINLIGREFATKNF----TIADANVEIPARLARLSKEMGVEKFIHISAL 135
++ + ++ ++ VINL+G + A A+VE+P ++ + GV + IH+SA+
Sbjct: 60 QLARFVEGADAVINLVGVLHGHRGDPYGPEFAKAHVELPTKIVSACEGKGVHRLIHMSAI 119
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEV-LREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
ADP P+ Y+ R+K GE+ V +TIFRPS ++G D FL + + R
Sbjct: 120 GADPRGPSMYL-------RSKGDGERAVHASSMLASTIFRPSVVFGPEDAFLNKFAFLQR 172
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+F + + K QP++VGDVA AIV + G+ Y+ GP Y L L+++
Sbjct: 173 -MFPVIPLAKPNARF--QPIFVGDVAKAIVNVLDLDASTGRTYELGGPSVYTLEALVEYC 229
Query: 255 HVVMKK 260
V+ K
Sbjct: 230 GDVIGK 235
>gi|339505399|ref|YP_004692819.1| NAD dependent epimerase / dehydratase-like protein [Roseobacter
litoralis Och 149]
gi|338759392|gb|AEI95856.1| NAD dependent epimerase / dehydratase-like protein [Roseobacter
litoralis Och 149]
Length = 327
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K G ++ + R + ++ G +GQV + R+D
Sbjct: 4 LVTIYGGSGFIGRYITRRMAKAGWRVRVAVR-RPNEAMFVKPYGVVGQVEPVLCNVRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R + ++ V+N +G T E R+AR++ E G+ K +HISA+ AD
Sbjct: 63 SVRDVMMGADAVVNCVGILAEDSKNTFDTVQAEGAERIARIAAEEGIAKMVHISAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S + RTK GE VL+ P A I RPS ++G+ D+F + M + +
Sbjct: 123 H-------SDSDYARTKALGEAGVLQHIPAAVILRPSIVFGAEDQFFNRFADMTK-LGPV 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDWFH 255
L V +T QPVYV DVA A A + A G +Y+ GP R L+ +L+ H
Sbjct: 175 LPVVSA--DTRFQPVYVDDVAQAAEKALTETVAPG-VYELGGPDVCSFRALMELMLETIH 231
>gi|192288479|ref|YP_001989084.1| NADH dehydrogenase (ubiquinone) [Rhodopseudomonas palustris TIE-1]
gi|192282228|gb|ACE98608.1| NADH dehydrogenase (ubiquinone) [Rhodopseudomonas palustris TIE-1]
Length = 321
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 113/234 (48%), Gaps = 16/234 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ + L ++ +I + R L+ G +GQ+ + R +
Sbjct: 8 LVTVFGGSGFLGRHVVSALARRDYRIRVAVRRPEL-AGHLQPLGRVGQIHAVQANLRYPE 66
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A++ S+V INL+G E + F + A S + +HISA+ A
Sbjct: 67 SVAAAMRGSHVAINLVGILAEGGAQKFDAVQGSGAATVAQAAASVG---ARMVHISAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D N P Y R+K GE+ VL P+ATIFRPS ++G D+F + + R
Sbjct: 124 DANSPARY-------ARSKAAGEQAVLAAVPQATIFRPSVVFGPEDQFTNRFAMLARM-- 174
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ G +T QPVYVGDVA AI A D G Y+ GP+ + E++
Sbjct: 175 -SPVLPLVGADTKLQPVYVGDVATAIADAVDDLAKPGATYELGGPEELTMREIM 227
>gi|332188275|ref|ZP_08390002.1| short chain dehydrogenase family protein [Sphingomonas sp. S17]
gi|332011671|gb|EGI53749.1| short chain dehydrogenase family protein [Sphingomonas sp. S17]
Length = 310
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 128/251 (50%), Gaps = 26/251 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQPYHPR 76
+ T+ G G++G Y+ +L + G+++ + R D R LR G LGQ F
Sbjct: 5 LVTLIGGGGFLGRYVARELMRDGTRVRVAQR----DPRQAYFLRTQGGLGQTQFVAADIA 60
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
D + +A++ ++ V+NL+G + +V+ +A ++ GV H+SA+
Sbjct: 61 RPDTVARAVEGADAVVNLVG----VMGGNMQRIHVDGARAVAEAARAAGVTALAHVSAIG 116
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL-RYYGHMWRH 195
AD N G + + R+K +GE V + FP ATI RPS ++G D+F+ R+ G +
Sbjct: 117 ADAN-------GQAAYARSKGEGETAVRQAFPNATILRPSIVFGREDQFVNRFAGMVSAP 169
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWF 254
V + + + G + QPV+ GDV AI AA + P+A G+ Y+ GP + EL+ W
Sbjct: 170 V---VPILRAGVKF--QPVFAGDVGEAIAAALRHPEAHGGRTYELGGPDVISMGELVRWI 224
Query: 255 HVVMKKGEPDY 265
+ + +P++
Sbjct: 225 AQTLGR-KPNF 234
>gi|381200625|ref|ZP_09907761.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
yanoikuyae XLDN2-5]
Length = 309
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 122/242 (50%), Gaps = 16/242 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T+FG G++G + L +G+++ I R + + ++ G+LGQ F + R D +
Sbjct: 7 TIFGGGGFLGRQVAQALMARGARVRIAQR-DLANSVKVKALGNLGQTQFVAANIRKPDTV 65
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ S++VINL+G + +F E A +A+ + GV +H+SA+ AD N
Sbjct: 66 ARALHGSDIVINLVG--ILSGDFDAVQH--EGAANVAQAAAAAGVTALVHVSAIGADANS 121
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P+ Y R+K GE VL FP ATI RPS ++G D+FL + +
Sbjct: 122 PSAY-------GRSKAAGEAAVLAAFPTATILRPSIIFGQEDQFLNRFAGVASS---GPV 171
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWFHVVMKK 260
V G T QPVYVGDVA AI A + P GK ++ GP+ + E+ W + +
Sbjct: 172 VPVIGAATKFQPVYVGDVAEAIANAAQQPGVFGGKTFELAGPQVMSMKEINAWVAKAIGR 231
Query: 261 GE 262
G+
Sbjct: 232 GD 233
>gi|427409937|ref|ZP_18900139.1| hypothetical protein HMPREF9718_02613 [Sphingobium yanoikuyae ATCC
51230]
gi|425712070|gb|EKU75085.1| hypothetical protein HMPREF9718_02613 [Sphingobium yanoikuyae ATCC
51230]
Length = 309
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 122/242 (50%), Gaps = 16/242 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T+FG G++G + L +G+++ I R + + ++ G+LGQ F + R D +
Sbjct: 7 TIFGGGGFLGRQVAQALMARGARVRIAQR-DLANSVKVKALGNLGQTQFVAANIRKPDTV 65
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ S++VINL+G + +F E A +A+ + GV +H+SA+ AD N
Sbjct: 66 ARALHGSDIVINLVG--ILSGDFDAVQH--EGAANVAKAAAAAGVTALVHVSAIGADANS 121
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P+ Y R+K GE VL FP ATI RPS ++G D+FL + +
Sbjct: 122 PSAY-------GRSKAAGEAAVLAAFPNATIVRPSIIFGQEDQFLNRFAGVASS---GPV 171
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWFHVVMKK 260
V G T QPVYVGDVA AI A + P GK ++ GP+ + E+ W + +
Sbjct: 172 VPVIGAATKFQPVYVGDVAEAIANAAQQPGVFGGKTFELAGPQVMSMKEINAWVAKAIGR 231
Query: 261 GE 262
G+
Sbjct: 232 GD 233
>gi|452823449|gb|EME30459.1| NADH dehydrogenase [Galdieria sulphuraria]
Length = 313
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 118/242 (48%), Gaps = 19/242 (7%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQG---SQIIIPYRGNFYDVRDLRLCGDLG-QVLFQ 71
N + TVFGA+G++G L ++ S + I R N +D+ DL + +
Sbjct: 1 MNQRIVTVFGATGFIGREFLRCLDREKRDFSVVRILSRKN----KDISFLEDLNLNIEYI 56
Query: 72 PYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIH 131
+ ++ AIK ++ V+NL+G + T+N + + E +AR+ V++F+H
Sbjct: 57 QGSITSQKDVETAIKGASHVVNLVGILYPTRNSSFDSIHHESVKNIARICNSGSVQQFVH 116
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGH 191
ISAL + + S++ RTK GEK L FP++T+ +PS +YG D F +
Sbjct: 117 ISALGSS-------LDSSSEYARTKALGEKAALSLFPQSTVLKPSIVYGPEDDFFNRFYR 169
Query: 192 MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA--GKIYQAVGPKRYLLSE 249
M + + G +T QPVYV DVA AI+ + + GK+Y+ GP +
Sbjct: 170 MAK--ISPVLPLVGGGQTQFQPVYVSDVAQAILVCLDEKQSVVGGKVYELGGPHVKTFRQ 227
Query: 250 LL 251
LL
Sbjct: 228 LL 229
>gi|90420734|ref|ZP_01228640.1| NADH-ubiquinone oxidoreductase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335025|gb|EAS48786.1| NADH-ubiquinone oxidoreductase [Aurantimonas manganoxydans
SI85-9A1]
Length = 369
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 118/234 (50%), Gaps = 17/234 (7%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
VFG SG++G YL L ++G +I + R L+ G++GQ++ + R +
Sbjct: 46 VFGGSGFVGRYLVQALARRGHRIRVACRRPDL-AYHLQPNGNMGQIMPIQANLRYPWSVE 104
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISALNADPNP 141
+A++ ++ V+NL+G A DA AR +A + ++G ISA+ AD N
Sbjct: 105 RAVEGADHVVNLVG-ILAQSGQQSFDALQSFGARTVAEATAKIGA-GMTQISAIGADEN- 161
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
GS++ RTK +GEK VL P A I RPS ++G+ D+F + M R F
Sbjct: 162 ------SGSEYARTKAEGEKAVLDAIPGAYIMRPSIVFGAEDQFFNRFADMAR--FSPFL 213
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELL 251
G +T QPVYVGDVA AI G++Y+ GP+ R ++ E+L
Sbjct: 214 PLIGGGKTRFQPVYVGDVAEAIADTVDGKVPGGRVYELGGPEVLTFRQMMEEML 267
>gi|297539583|ref|YP_003675352.1| NAD-dependent epimerase/dehydratase [Methylotenera versatilis 301]
gi|297258930|gb|ADI30775.1| NAD-dependent epimerase/dehydratase [Methylotenera versatilis 301]
Length = 320
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 20/248 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++GS + KL G + + R + L L L V + + + +
Sbjct: 13 VLGGSGFVGSAIVAKLDAAGYSVKVLTRRR-DSAKHLFL---LPNVQVEECNVNDYQSLN 68
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
A++ ++VVINL+G +++ T + ++PA+LA++ ++ +++ IH+S+L A + P
Sbjct: 69 SALRGADVVINLLGILHQSRHSTFNAIHHQLPAQLAKICVDLNIKRLIHMSSLKAAKSAP 128
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEA---TIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
SQ+ R+K GE +L EF TIF+PS ++G GD F+ + + +
Sbjct: 129 -------SQYLRSKGAGEAALL-EFQNQLNITIFQPSVIFGRGDSFINLFATL----IKT 176
Query: 200 LAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
L V + K QPV+V DVA+ VA+ + G+IY+ GPK Y EL+ +
Sbjct: 177 LPVVMLAKPNAKFQPVWVEDVASCFVASIANDATYGQIYELAGPKIYTFRELVKTVMNAL 236
Query: 259 KKGEPDYG 266
+ P G
Sbjct: 237 QVQRPIIG 244
>gi|89052737|ref|YP_508188.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Jannaschia sp. CCS1]
gi|88862286|gb|ABD53163.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Jannaschia sp. CCS1]
Length = 327
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 126/242 (52%), Gaps = 15/242 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G Y+ ++ K G ++ + R + ++ G +GQV + R+DD
Sbjct: 4 LVTIFGGSGFVGRYIARRMAKDGWRVRVAVR-RPNEALFVKPYGVVGQVEPILANIRDDD 62
Query: 80 EIRKAIKYSNVVINLIGR-EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+R AI+ S+ V+N +G + A KN A N E AR+AR++ E GV +F+H+SA+ AD
Sbjct: 63 SVRAAIRASDAVVNCVGTFDVAGKNNFQAVQN-EGAARIARIAAEEGVGRFVHMSAIGAD 121
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
+ G S + ++K QGE VL FP A I RPS ++G D F + M R
Sbjct: 122 -------VEGRSLYAKSKGQGEAAVLDAFPTAMILRPSVIFGPEDNFFNRFAGMTRL--- 171
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
+ G +T QPVYV DVA A K A IY+ GP +L+ V+
Sbjct: 172 SPVLPVAGADTRFQPVYVDDVAQAAQLGVKGE--AHGIYELGGPDAETFRQLMQRMLGVI 229
Query: 259 KK 260
++
Sbjct: 230 RR 231
>gi|297183462|gb|ADI19593.1| predicted nucleoside-diphosphate-sugar epimerases [uncultured SAR11
cluster bacterium HF0770_37D02]
Length = 291
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 120/248 (48%), Gaps = 27/248 (10%)
Query: 59 LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLA 118
L+ G+ GQ+ + N +++++ IK ++VINL+G + T+ +V+ P L+
Sbjct: 24 LKPLGNPGQIELFRTNIFNSEDVKQVIKNCDLVINLVGVLYETRKQKFNQIHVQFPNLLS 83
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
L E GV+K +H+SAL SQ+ ++K QGEK + F ++ I RPS +
Sbjct: 84 ELCNEFGVKKLVHVSALGVKE-------GHTSQYMQSKLQGEKNIQNIFKKSIILRPSVI 136
Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
+G DKF + + + F G +T +PVYVGDVA AIV + + ++ IY+
Sbjct: 137 FGPEDKFFNTFATIAQ--FSPALPLIGGGKTQFEPVYVGDVAVAIVKSLELDNSEPNIYE 194
Query: 239 AVGPKRYLLSELLDWFHVVMKKGE----PDYGYYRYDLRYDPVMPLKLFINGLFPGYPMG 294
+G Y EL+ +KK +G ++ + +MP L
Sbjct: 195 -LGGANYSFRELMQILLSEIKKKRFLIPIPFGMAKFQSYFLQMMPTPL------------ 241
Query: 295 HLTPERVE 302
LTP++VE
Sbjct: 242 -LTPDQVE 248
>gi|431806489|ref|YP_007233390.1| NAD-dependent epimerase/dehydratase [Liberibacter crescens BT-1]
gi|430800464|gb|AGA65135.1| NAD-dependent epimerase/dehydratase [Liberibacter crescens BT-1]
Length = 325
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 11/244 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G + L +G +I + R V LC +GQ+ + +++
Sbjct: 9 LVTIFGGSGFIGRRIVQSLAHRGYRIKVVVRKPHLAVFLKPLC-RVGQLSIVQGNVCHEN 67
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R+AIK S+ VIN +G F T + + +A+ + GV HISA+ AD
Sbjct: 68 SVRQAIKGSSHVINCVGLLFETSSNSFISVQEHGAHTIAKAAASFGVP-LTHISAIGADA 126
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N S++ R+K +GE +L I RPS ++GS DKF + +M R F
Sbjct: 127 NSE-------SKYARSKGRGENLILSANSNTIIIRPSIVFGSEDKFFNKFANMTR--FLP 177
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
T QPVYVGDVA I ++ G IY+ GP+ E ++ V+
Sbjct: 178 FIPLIDNGRTKLQPVYVGDVAEVIASSVIGKLNPGTIYEIGGPEILTFRECMEKIFKVIG 237
Query: 260 KGEP 263
+ +P
Sbjct: 238 RKKP 241
>gi|209551890|ref|YP_002283807.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|424915879|ref|ZP_18339243.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|209537646|gb|ACI57581.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|392852055|gb|EJB04576.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 326
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R I +A+ ++ V+N +G T T DA E AR + HISA+
Sbjct: 64 RYRSSIDRAVDGADHVVNCVGILHETGRNTF-DAVQEFGARAVAEAARGAGATLAHISAI 122
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
A+ N + Y RTK + E +L P+A IFRPS ++G D F + M R
Sbjct: 123 GANANSESGY-------GRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFADMAR- 174
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ G +T QPVYV DVA A+ A A GK+Y+ GP+ E L+
Sbjct: 175 -MSPVLPLIGGGKTKFQPVYVEDVAEAVARAVDGKVAGGKVYELGGPEVLSFRECLEMML 233
Query: 256 VVMKKGEP 263
V + P
Sbjct: 234 KVTSRKNP 241
>gi|167648908|ref|YP_001686571.1| NADH dehydrogenase [Caulobacter sp. K31]
gi|167351338|gb|ABZ74073.1| NADH dehydrogenase [Caulobacter sp. K31]
Length = 318
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 37 KLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96
+L K G ++ + R R +R+ GD+GQ+ + RN + +A+ + +NL+G
Sbjct: 21 RLAKAGYRVRVAVRNPNLGYR-MRMLGDVGQIEVVQANVRNAASVARALDGAEAAVNLVG 79
Query: 97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156
T +V +A +K GV++ + ISA+ AD + S++ RTK
Sbjct: 80 VLLETGRQKFQTLHVMGARTVAEQAKAAGVKRLVQISAIGADE-------TASSKYARTK 132
Query: 157 YQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYV 216
GE V FP A + RPS ++G+ DKF +G M +F L + G ET QPV+V
Sbjct: 133 AMGEAAVREAFPGAVVIRPSIVFGADDKFFNKFGQM-AALFPALPLIGGG-ETRFQPVFV 190
Query: 217 GDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
GDVA + A P A G Y+ GP Y +LL+
Sbjct: 191 GDVAQVVANAVASPAAEGLTYELGGPTVYSFKQLLE 226
>gi|91789752|ref|YP_550704.1| NAD-dependent epimerase/dehydratase [Polaromonas sp. JS666]
gi|91698977|gb|ABE45806.1| NAD-dependent epimerase/dehydratase [Polaromonas sp. JS666]
Length = 318
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 131/275 (47%), Gaps = 25/275 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++G ++C KL + ++ + R + R L+ L + + + +
Sbjct: 6 ILGGTGFVGRHVCEKLAQLQCRVTVATR-RLDNARHLQTLPMLDVIEIDVH---DSAALT 61
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ + V+NLI T+ A+V++P L R + G+ + +HISAL A
Sbjct: 62 SLLAGHDAVVNLIAILHGTEA-AFEKAHVQLPLALVRACEAAGLRRIVHISALGAS---- 116
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
+S S + R+K +GE +L + T+ RPS ++G+ DKFL + + + +F V
Sbjct: 117 ---VSSASMYQRSKARGEAVLLSAGLDVTLLRPSVIFGAEDKFLNTFARL-QQLFP--VV 170
Query: 203 YKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD----WFHVVM 258
+ QPV+V DVA+A+V +D + G++Y+A GP + L +L++ + V
Sbjct: 171 PLAASQARFQPVWVEDVASAVVHCLQDSSSIGQVYEACGPDVFTLRQLVELAGRYAGVNG 230
Query: 259 KKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPM 293
KG P P+ L+ + L PG P+
Sbjct: 231 GKGRPVIAL------PAPLGRLQARLMELLPGEPL 259
>gi|304320640|ref|YP_003854283.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Parvularcula
bermudensis HTCC2503]
gi|303299542|gb|ADM09141.1| NADH-ubiquinone oxidoreductase 39 kDa subunit precursor, putative
[Parvularcula bermudensis HTCC2503]
Length = 324
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 11/235 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TV GASG++G ++ +L G +I R + L+ G LGQ+ + R
Sbjct: 5 IVTVLGASGFLGRHVVRELANHGWRIRAAVR-RPNNAHFLKPLGKLGQIDIVQANIRERM 63
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +A++ +N V+NL+G T V+ +A ++ + +H+SA+ ADP
Sbjct: 64 SVAEAVEGANAVVNLVGILAPEGQQTFESVQVQGARNVAEMAARADITNVVHVSAIGADP 123
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S + RTK GE V P A I RPS ++G D F + M +
Sbjct: 124 -------ASDSVYARTKAAGEAAVKEAIPGAAILRPSIVFGPQDDFFNRFASMAQ--MSP 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ G +T QP+YV +VA + AA D D G+ Y+ GP+ EL+
Sbjct: 175 VLPLISG-QTRFQPIYVDNVADCVAAALDDLDLRGRTYELGGPEIMTFKELMQLM 228
>gi|257091910|ref|YP_003165551.1| NADH dehydrogenase (ubiquinone) [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044434|gb|ACV33622.1| NADH dehydrogenase (ubiquinone) [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 321
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 24/247 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G SG++G ++ + L ++G ++ IP R + + L + + V + P+ +
Sbjct: 8 LIGGSGFVGGWIASCLSERGVRVTIPTR-RRENTKKLIMLPTVSMVEANIHDPQ---VLA 63
Query: 83 KAIKYSNVVINLIGREFATKNFT-----IADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ ++ + VINL+G T + A+V++P ++ +E GV + +H+SAL A
Sbjct: 64 QLVQGHDAVINLVGVLHDTDSRLPYGRGFQAAHVDLPKKIIAAMRENGVRRLVHMSALRA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPE--ATIFRPSDMYGSGDKFLRYYGHMWRH 195
N P S++ R+K GE V E T+FRPS ++G D FL +M+
Sbjct: 124 GINAP-------SEYLRSKGDGEAAVRSAMNELDVTMFRPSVIFGPDDAFL----NMFAK 172
Query: 196 VFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ R V G + + QPVYVGDVA A + + G+ Y+ GPK Y L E++D+
Sbjct: 173 LLRLFPVLPLGGGSARFQPVYVGDVARAFADSLTNGATFGQTYELCGPKVYTLREMVDYT 232
Query: 255 -HVVMKK 260
H+V K+
Sbjct: 233 AHLVGKQ 239
>gi|384917746|ref|ZP_10017856.1| NADH-ubiquinone oxidoreductase, putative [Citreicella sp. 357]
gi|384468387|gb|EIE52822.1| NADH-ubiquinone oxidoreductase, putative [Citreicella sp. 357]
Length = 327
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 117/241 (48%), Gaps = 12/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G ++ ++ K G ++ + R + ++ G +GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRHIARRMAKLGWRVRVAVR-RPNEALFVKSYGAVGQVEPVQCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R ++ ++ V+N +G A + + R+ARL+ GV + + ISA+ AD
Sbjct: 63 SVRAVMQGADAVVNCVGTFDAKGKNSFEAIQHQGAERVARLAAAEGVARMVQISAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S + R+K QGE+ VL P+A I RPS ++G D F + M R
Sbjct: 123 DS-------ASDYARSKAQGEQAVLNHMPDAVILRPSVIFGPEDSFFNRFAGMSRM---G 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
+ G +T QPVYV DVA A V AAG IY+ GP ++ V++
Sbjct: 173 PVLPLVGADTKFQPVYVDDVAHAAVLGATGKAAAG-IYELGGPDVGTFRAFIEQMLTVIR 231
Query: 260 K 260
+
Sbjct: 232 R 232
>gi|306837551|ref|ZP_07470423.1| NADH-ubiquinone oxidoreductase [Brucella sp. NF 2653]
gi|306407335|gb|EFM63542.1| NADH-ubiquinone oxidoreductase [Brucella sp. NF 2653]
Length = 328
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 14 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEIAYY----MAPLGNVGQIQMVQANVR 69
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + + +K S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 70 HRGSVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGTKHIAEAAKAEGI-RMTHLSSLA 128
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P+ Y RTK +GE V P+ I RPS ++G D+F + +M R
Sbjct: 129 ADVNSPSAY-------ARTKAEGEIAVQSVLPDTVILRPSIIFGHEDRFFNRFANMAR-- 179
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+V A G IY+ GP
Sbjct: 180 FSPFLPVIGGGETKLQPVYVGDVAEAVVRAVDGKLMPGGIYELGGP 225
>gi|265984865|ref|ZP_06097600.1| NAD-dependent epimerase/dehydratase [Brucella sp. 83/13]
gi|264663457|gb|EEZ33718.1| NAD-dependent epimerase/dehydratase [Brucella sp. 83/13]
Length = 333
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEIAYY----MAPLGNVGQIQMVQANVR 74
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + + +K S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 75 HRGSVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGTKHIAEAAKAEGI-RMTHLSSLA 133
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P+ Y RTK +GE V P+ I RPS ++G D+F + +M R
Sbjct: 134 ADVNSPSAY-------ARTKAEGEIAVQSVLPDTVILRPSIIFGHEDRFFNRFANMAR-- 184
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+V A G IY+ GP
Sbjct: 185 FSPFLPVIGGGETKLQPVYVGDVAEAVVRAVDGKLMPGGIYELGGP 230
>gi|399061632|ref|ZP_10746206.1| putative nucleoside-diphosphate sugar epimerase [Novosphingobium
sp. AP12]
gi|398035428|gb|EJL28671.1| putative nucleoside-diphosphate sugar epimerase [Novosphingobium
sp. AP12]
Length = 324
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 114/235 (48%), Gaps = 20/235 (8%)
Query: 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR--GNFYDVRDLRLCGDLGQVLFQPYHP 75
G + TV G SG++G +L +L +G+++ I R + +R L +LGQV F
Sbjct: 15 GKIVTVLGGSGFVGRHLAQELLARGARLRIASRYPKKAFTIRTL---ANLGQVQFAGVDV 71
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
D I + S+ V+NL+G + + +A +K GV F+HISA+
Sbjct: 72 TKPDSIAAVLAGSDAVVNLVG----AFGGNLDAVQGKGAGAIAAAAKVAGVSAFVHISAI 127
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD Y RTK +GE V FPEATI RPS M+G D+F+ + +
Sbjct: 128 GADARSDIDY-------ARTKGEGEDAVRAAFPEATILRPSLMFGPDDRFVMMFAEL--- 177
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSE 249
+ R A+ + QPV+V DVAAAI A DP+ G+ Y+ GP+ + E
Sbjct: 178 ISRMPALPVFAPQAKLQPVFVDDVAAAIGNALADPETHGGRTYEVAGPEVITMIE 232
>gi|409408069|ref|ZP_11256513.1| NADH-ubiquinone oxidoreductase [Herbaspirillum sp. GW103]
gi|386432525|gb|EIJ45352.1| NADH-ubiquinone oxidoreductase [Herbaspirillum sp. GW103]
Length = 322
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 121/239 (50%), Gaps = 25/239 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G SG++G+ L LG G ++++P R Y+ L + V+ H +D +
Sbjct: 8 VIGGSGFIGTRLIELLGSTTGYRVMVPTRR--YERAKHLLVSPVVSVVQADIH--DDAVL 63
Query: 82 RKAIKYSNVVINLIG-------REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
+ + ++VVINL+G R A+ +V +P R+ + GV +++H+SA
Sbjct: 64 ARLVAEADVVINLVGILQSRPARGGASYGPDFERQHVVLPRRIVAACAQQGVARYLHMSA 123
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP-EATIFRPSDMYGSGDKFLRYYGHMW 193
L AD P+ Y+ R+K GE+E L + IFRPS ++G GD F+ +M+
Sbjct: 124 LCADAQAPSMYL-------RSKAAGEQEALASPALDVAIFRPSVVFGEGDNFI----NMF 172
Query: 194 RHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ R V G + QPVYVGDVA A V A P GK+++ GPK+Y L EL+
Sbjct: 173 AGLNRMFPVIPLGSPDARFQPVYVGDVAQAFVNALALPRLGGKVFELGGPKQYTLRELV 231
>gi|372487369|ref|YP_005026934.1| putative nucleoside-diphosphate sugar epimerase [Dechlorosoma
suillum PS]
gi|359353922|gb|AEV25093.1| putative nucleoside-diphosphate sugar epimerase [Dechlorosoma
suillum PS]
Length = 319
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 126/250 (50%), Gaps = 25/250 (10%)
Query: 23 VFGASGYMGSYLCNKL-GKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G SG++GS++ N L ++G +I +P R L L G V + ++++
Sbjct: 8 LLGGSGFVGSHIANLLSAREGIRITVPSRRRERAKHLLPLPG----VDVVEANINKEEDL 63
Query: 82 RKAIKYSNVVINLIGREFATKNF----TIADANVEIPARLARLSKEMGVEKFIHISALNA 137
++ + VINL+G A A+VE+P ++ ++ GV++ +H+SAL A
Sbjct: 64 LALMRGQDAVINLVGILHGDSEMPYGRKFAQAHVELPRKVVAAMQQAGVKRLVHMSALKA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLR-EFP-EATIFRPSDMYGSGDKFLRYYGHMWRH 195
D P+ Y+ R+K GE VL + P + T+FRPS ++G+GD FL + +
Sbjct: 124 DTKGPSEYL-------RSKGDGEAIVLAAQGPLDVTVFRPSVIFGAGDSFLNTFAKLL-- 174
Query: 196 VFRKLA-VYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
KLA V+ G + QPV + DV A V + +D D G+ Y+ GP Y L EL+ +
Sbjct: 175 ---KLAPVFPIGFPDARFQPVCIDDVGQAFVDSLEDSDTFGQTYELCGPGVYSLRELIQY 231
Query: 254 FHVVMKKGEP 263
V+ K P
Sbjct: 232 TGKVIGKERP 241
>gi|296136950|ref|YP_003644192.1| NAD-dependent epimerase/dehydratase [Thiomonas intermedia K12]
gi|295797072|gb|ADG31862.1| NAD-dependent epimerase/dehydratase [Thiomonas intermedia K12]
Length = 330
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 118/246 (47%), Gaps = 26/246 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++GS L N L + +P R ++L L V+ H +D ++
Sbjct: 8 VIGGSGFIGSRLVNALSLANHFVTVPTRRRQRARHLVQL--PLVDVVETDVH--DDAKLA 63
Query: 83 KAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
K + + V+NL+G R A A+V++P R+A + GV + +H+SAL AD
Sbjct: 64 KLVAGRDAVVNLVGILQGRRGQPYGADFARAHVDLPRRIAAACAQQGVRRVVHMSALGAD 123
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFP-EATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
N P+ Y+ R+K GE + + + TIFRPS ++G D FL + + R VF
Sbjct: 124 SNGPSMYL-------RSKGDGEAALKAQAGIDLTIFRPSVVFGPEDNFLNTFAKLQR-VF 175
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA---AGKIYQAVGPKRYLLSELL--- 251
V G +T PVYVGDV A ++ P A G+ Y+ GP Y L+EL+
Sbjct: 176 P--VVPLAGAKTRFAPVYVGDVVTAFASSLVGPQARETLGQTYELCGPGTYTLAELVRLS 233
Query: 252 -DWFHV 256
W V
Sbjct: 234 GQWARV 239
>gi|424897919|ref|ZP_18321493.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393182146|gb|EJC82185.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 326
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYRIRVGVRRPDLAGF-----LQPLGNVGQISFVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R + I +A+ ++ V+N +G T T DA E R + HISA+
Sbjct: 64 RYRNSIDRAVDGADHVVNCVGILHETGRNTF-DAVQEFGGRAVAEAARGAGASLAHISAI 122
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
A+ N + Y RTK + E +L P+A IFRPS ++G D F + M R
Sbjct: 123 GANANSDSGY-------GRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFADMAR- 174
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ G +T QPVYV DVA A+ A A GKIY+ GP+ E L+
Sbjct: 175 -MSPVLPLIGGGKTKFQPVYVEDVAEAVARAVDGKVAGGKIYELGGPEVLSFRECLEMML 233
Query: 256 VVMKKGEP 263
V + P
Sbjct: 234 KVTSRKNP 241
>gi|116250097|ref|YP_765935.1| NADH-ubiquinone oxidoreductase subunit [Rhizobium leguminosarum bv.
viciae 3841]
gi|115254745|emb|CAK05819.1| putative NADH-ubiquinone oxidoreductase subunit [Rhizobium
leguminosarum bv. viciae 3841]
Length = 326
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 113/248 (45%), Gaps = 19/248 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYNIRVAVRRPDLAGF-----LQPLGNVGQISFVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R I +A+ ++ V+N +G T T DA E AR + HISA+
Sbjct: 64 RYRSSIDRAVDGASHVVNCVGILHETGRNTF-DAVQEFGARAIAEAARGAGATLTHISAI 122
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD + S + RTK + E +L P+A IFRPS ++G D F + M R
Sbjct: 123 GAD-------VKSDSDYGRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFAEMAR- 174
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ G +T QPVYV D+A A+ A A GK+Y+ GP+ E L+
Sbjct: 175 -MSPILPLIGGGKTKFQPVYVEDIAEAVARAVDGKVAGGKVYELGGPEVLSFRECLETML 233
Query: 256 VVMKKGEP 263
V + P
Sbjct: 234 KVTCRKNP 241
>gi|332529567|ref|ZP_08405523.1| NAD-dependent epimerase/dehydratase [Hylemonella gracilis ATCC
19624]
gi|332040917|gb|EGI77287.1| NAD-dependent epimerase/dehydratase [Hylemonella gracilis ATCC
19624]
Length = 321
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 118/237 (49%), Gaps = 19/237 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G ++C L ++G + + R + L G VL H ++ +R
Sbjct: 6 VLGGTGFVGRHVCEHLVRRGCGVTVLTRRAEHARAVQHLPGL--SVLEGDVH--DEATLR 61
Query: 83 KAIKYSNVVINLIG-REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+ + + V+NL+ T F A+V++P LAR S V + IHISAL A P
Sbjct: 62 RLLPGHDAVVNLVAILHGGTAAFE--RAHVKLPRTLARASLASDVRRVIHISALGAAPE- 118
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEA-----TIFRPSDMYGSGDKFLRYYGHMWRHV 196
S S++ R+K QGE VLRE ++ T+ RPS ++GS D+FL + + R +
Sbjct: 119 --TAASAPSRYLRSKSQGEA-VLREAADSNGLQLTVLRPSVIFGSDDRFLNLFAELQR-I 174
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
F + + G + QPV+V DVA A+ DP G+ Y+ GP + L EL+
Sbjct: 175 FPLVPL--AGAQARFQPVWVEDVAEAVTRCLFDPRTVGQTYELCGPSVHSLRELVQL 229
>gi|254437076|ref|ZP_05050570.1| 3-beta hydroxysteroid dehydrogenase/isomerase family
[Octadecabacter antarcticus 307]
gi|198252522|gb|EDY76836.1| 3-beta hydroxysteroid dehydrogenase/isomerase family
[Octadecabacter antarcticus 307]
Length = 325
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 112/238 (47%), Gaps = 13/238 (5%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V+G SG++G Y+ +L K G ++ + R N + ++ G +GQV + R+DD +R
Sbjct: 7 VYGGSGFVGRYIARRLAKDGWRVRVAVR-NPNEAMFVKPYGAVGQVEPVFCNIRDDDSVR 65
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ ++ V+N +G T R+AR++ GV + +SA+ AD
Sbjct: 66 SVMHGADAVVNCVGVLDEIGKNTFEAVQASGAERIARIAASTGVGAMVQMSAIGADAESE 125
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
S++ RTK GE VL P A I RPS ++G D F + M R +
Sbjct: 126 -------SEYARTKAAGEAGVLAHMPNAMILRPSIIFGDEDGFFNRFAGMSRF---GPVL 175
Query: 203 YKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260
G +T QPVYV DVAAA V + A +++ GP + EL+ ++++
Sbjct: 176 PIVGADTKFQPVYVDDVAAAAVIGVQ--GRAQGVFELGGPDVQTMRELMTGMLAIIRR 231
>gi|94496188|ref|ZP_01302766.1| NAD-dependent epimerase/dehydratase [Sphingomonas sp. SKA58]
gi|94424367|gb|EAT09390.1| NAD-dependent epimerase/dehydratase [Sphingomonas sp. SKA58]
Length = 308
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 18/244 (7%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T+FG G++G + L +G+++ I R + ++ G LGQ F R +
Sbjct: 7 TIFGGGGFLGRQVAQALMARGARVRIAQR-DLASAIKVKSLGALGQSQFVAADIRKPATV 65
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADA-NVEIPARLARLSKEMGVEKFIHISALNADPN 140
+AI S+VVINL+G +F DA + + A +A+ + V +H+SA+ AD
Sbjct: 66 ERAIAGSDVVINLVG--ILAGDF---DAFHHQGAAHVAQAAAAANVRALVHVSAIGADAE 120
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
P+ Y R+K GE V FP ATI RPS ++G D+FL + + +
Sbjct: 121 SPSAY-------GRSKAAGEAAVKEAFPGATIIRPSIIFGPQDQFLNRFADL---IASMP 170
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWFHVVMK 259
+ T QPVYVGDVA AI A + PD G +Y+ GP+ + E+ W +
Sbjct: 171 VIPVISGATKFQPVYVGDVADAIANAAERPDLHGGTVYEVAGPQILSMKEINSWIAKQIG 230
Query: 260 KGEP 263
+ +P
Sbjct: 231 RDKP 234
>gi|86355969|ref|YP_467861.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli CFN 42]
gi|86280071|gb|ABC89134.1| probable NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli CFN 42]
Length = 326
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 115/248 (46%), Gaps = 19/248 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R + I +A + ++ V+N +G T T DA E AR + HISA+
Sbjct: 64 RYRNSIDRAAEGASHVVNCVGILHETGRNTF-DAVQEFGARAVAEAARNAGATLTHISAI 122
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
A+ + S + RTK + E +L P+A IFRPS ++G D F + M R
Sbjct: 123 GANTD-------SDSDYGRTKGRAEAAILSIKPDAVIFRPSIVFGPEDSFFNKFADMAR- 174
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ G +T QPVYV DVA A+ A A GKIY+ GP+ E L+
Sbjct: 175 -MSPVLPLVGGGKTKFQPVYVEDVAEAVARAVDGKVAGGKIYELGGPEVLSFRECLEMML 233
Query: 256 VVMKKGEP 263
V + P
Sbjct: 234 KVTSRKNP 241
>gi|149204272|ref|ZP_01881239.1| NADH-ubiquinone oxidoreductase [Roseovarius sp. TM1035]
gi|149142157|gb|EDM30204.1| NADH-ubiquinone oxidoreductase [Roseovarius sp. TM1035]
Length = 327
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 122/242 (50%), Gaps = 14/242 (5%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ + G ++ + R + ++ G +GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAQAGWRVRVAVR-RPNEAMHVKPYGVVGQVEPVFCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPA-RLARLSKEMGVEKFIHISALNAD 138
+R ++ ++ V+N +G F K DA + A R+AR++ E GV +H+SA+ AD
Sbjct: 63 SVRAVMQGADAVVNCVG-TFDRKGKNSFDAVQDKGATRIARIAAEEGVAHLVHLSAIGAD 121
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
++Y R+K GE +L+ FP A I RPS ++G D+F + M R +
Sbjct: 122 ATSDSHY-------ARSKAAGEAGILQHFPNAVILRPSVIFGPEDQFFNRFSGMTR-LGP 173
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
L V G +T QPVYV DVA A V G IY+ GP+ L+ V+
Sbjct: 174 VLPVV--GADTRFQPVYVDDVAQAAVMGAMGRATPG-IYELGGPEAISFRGLMQQMLQVI 230
Query: 259 KK 260
++
Sbjct: 231 RR 232
>gi|424879664|ref|ZP_18303296.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392516027|gb|EIW40759.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 326
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 112/248 (45%), Gaps = 19/248 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYNIRVAVRRPDLAGF-----LQPLGNVGQISFVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R I +A+ ++ V+N +G T T DA E AR + HISA+
Sbjct: 64 RYRSSIDRAVDGASHVVNCVGILHETGRNTF-DAVQEFGARAIAEAARGAGATLTHISAI 122
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD S + RTK + E +L P+A IFRPS ++G D F + M R
Sbjct: 123 GADAK-------SDSDYGRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFAEMAR- 174
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ G +T QPVYV DVA A+ A A GK+Y+ GP+ E L+
Sbjct: 175 -MSPILPLIGGGKTKFQPVYVEDVAEAVARAVDGKVAGGKVYELGGPEVLSFRECLETML 233
Query: 256 VVMKKGEP 263
V + P
Sbjct: 234 KVTCRKNP 241
>gi|390448505|ref|ZP_10234124.1| NAD-dependent epimerase/dehydratase [Nitratireductor aquibiodomus
RA22]
gi|389665869|gb|EIM77328.1| NAD-dependent epimerase/dehydratase [Nitratireductor aquibiodomus
RA22]
Length = 324
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 116/243 (47%), Gaps = 21/243 (8%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T+FG +G++G +L L K+G ++ + R N L+ G++GQV + RN +
Sbjct: 12 TIFGGNGFVGRHLVQALTKRGHRVRVACR-NPNTAIHLQPLGNVGQVQAVQANLRNRASV 70
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A++ ++ VINL+G + + + DA AR + K H SA+ ADP
Sbjct: 71 DRAVEGADHVINLVGILYESGRQSF-DAIQHFGARAVAEAARAAGAKLTHGSAIGADPE- 128
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
S + RTK GE+ VL +A I RPS ++G D F + +M R F
Sbjct: 129 ------SDSDYARTKALGEQAVLETVKDAVIIRPSIVFGPEDDFFNRFANMAR--FSPFL 180
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD----- 252
G ET QPVYVGDVA A + G+IY+ GP+ R L E+L+
Sbjct: 181 PLIGGGETKFQPVYVGDVAEAYARSVDGDLEGGQIYELGGPEVLSFRECLEEMLEATYRK 240
Query: 253 -WF 254
WF
Sbjct: 241 RWF 243
>gi|402850003|ref|ZP_10898220.1| NAD-dependent epimerase [Rhodovulum sp. PH10]
gi|402499754|gb|EJW11449.1| NAD-dependent epimerase [Rhodovulum sp. PH10]
Length = 335
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 128/285 (44%), Gaps = 24/285 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ L ++ I R L+ G +GQ+ + RN D
Sbjct: 19 LVTVFGGSGFLGRHVVRALAPDLWRLRIAVRRPDL-AGHLQPLGRVGQIHPVQANLRNAD 77
Query: 80 EIRKAIKYSNVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
I +A++ S VVINL+G F +NF +A A + + +H+SA+ A
Sbjct: 78 SIARAVEGSAVVINLVGILFEKGKQNF---EAVHLAGAEAVAKAAAAQGARLVHVSAIGA 134
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DPN G + + RTK + E+ VL P+A I RPS ++G D F +G M R F
Sbjct: 135 DPN-------GRALYARTKGRAEQAVLAAAPDAVILRPSVIFGPDDDFFNKFGSMAR--F 185
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
+ G T QPV+ GDV A+ A G IY+ GP E+L V
Sbjct: 186 APVLPLIGGGRTKFQPVFGGDVGEAVRKAAAGEARPGTIYELGGPDVMTFKEILRLVLQV 245
Query: 258 MKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVE 302
++ R L P KL + + P LTP++VE
Sbjct: 246 TER--------RRLLLPVPFWAAKL-LGAMLKILPTPPLTPDQVE 281
>gi|58584495|ref|YP_198068.1| nucleoside-diphosphate-sugar epimerase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58418811|gb|AAW70826.1| Nucleoside-diphosphate-sugar epimerase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 316
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 14/235 (5%)
Query: 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE 80
+FG +G++G ++ +L G I + R N L+LCG+LGQ+ ++
Sbjct: 5 VVIFGGTGFIGKHIVRRLATAGYLIRVFVR-NQEKAACLKLCGNLGQISIFKGDFFDEKL 63
Query: 81 IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
I ++++ NVVINL+G + K + +V I ++AR +K V IH SA+ +
Sbjct: 64 ILESVEECNVVINLVGILYEVKEHSFYAVHVGIAEKIARAAKIKNVSMMIHFSAMGIEN- 122
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV-FRK 199
S S++ ++K +GEK V FPEA I +PS ++G D F + + + F
Sbjct: 123 ------SKLSEYAQSKLKGEKAVTAAFPEAIIIKPSLVFGKEDNFFTKFARLATILPFLP 176
Query: 200 LAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
L G T K QP+ V D+A + KIY GPK Y LL +
Sbjct: 177 LI----GSGTTKFQPICVTDLAEMVYRIINLNKQDKKIYNIGGPKIYSFKSLLKF 227
>gi|222480302|ref|YP_002566539.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
gi|222453204|gb|ACM57469.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
Length = 298
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 133/284 (46%), Gaps = 40/284 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-RLCGDLGQVLFQPYHPRNDDEI 81
V G +G++GSYLC L G ++ R + GD+ + D I
Sbjct: 5 VAGGTGFIGSYLCRALADGGHEVTALSRSPSDTPEGVASATGDV----------TDYDSI 54
Query: 82 RKAIKYSNVVINLIGRE--FATKNFTIADANV--EIPARLARLSKEMGVEKFIHISALNA 137
A++ + V+NL+ F K + + + L R ++E G E+F+ +SAL A
Sbjct: 55 ASAVEGQDAVVNLVALSPLFEPKGGNVMHDRIHRKGTENLVRAAEEGGAERFLQLSALGA 114
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA-TIFRPSDMYGSGDKFLRYYGHMWRHV 196
DP+ T YI R K Q E E++RE TIFRPS ++G G +F+ + +
Sbjct: 115 DPDGDTAYI-------RAKGQAE-EIVRESGLGWTIFRPSVVFGEGGEFVSFTKRLKGMF 166
Query: 197 FRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
L +Y G +T QP++V D+ + +VAA ++ + G+ Y+ GP+ L ++ D
Sbjct: 167 APGLPLYPLPGGGKTRFQPIHVEDLVSMLVAALEEDEHVGETYEIGGPETLTLRQVTDLV 226
Query: 255 HVVMKKGEPDYGYYRYDLRYDPV-MPLK---LFINGLFPGYPMG 294
+ KKG + P+ MPL L + G PG+PMG
Sbjct: 227 YEAEKKG----------VTIIPLPMPLARIGLTVLGAVPGFPMG 260
>gi|170747481|ref|YP_001753741.1| NADH dehydrogenase (ubiquinone) [Methylobacterium radiotolerans JCM
2831]
gi|170654003|gb|ACB23058.1| NADH dehydrogenase (ubiquinone) [Methylobacterium radiotolerans JCM
2831]
Length = 412
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 119/245 (48%), Gaps = 20/245 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL----CGDLGQVLFQPYHP 75
+ T++G SG++G ++ L K+G +I + R DL L G + Q++ +
Sbjct: 34 LVTIYGGSGFLGRHVVRALAKRGYRIRVAVRRP-----DLALFLQPLGKVNQIVAVQANL 88
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R D + +A + S+V+INL+G T + + A V+ A + + I +SA+
Sbjct: 89 RYPDSVARAAERSDVLINLVGILQETGSQSFARLQVD-GAEAIARAAARQGARMIQVSAI 147
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADP P+ Y RTK +GE V P+A +FRPS ++G GD F + + R
Sbjct: 148 GADPASPSLY-------ARTKAEGEARVFAACPDAVVFRPSLIFGPGDSFFNRFAGLARA 200
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ + G ++ QP +VGDVA AI A A GK+Y+ GP+ L + +
Sbjct: 201 L---PVLPLAGGQSRFQPAFVGDVAEAIARAVDGTVAPGKVYELGGPEVGTLEHFVRYML 257
Query: 256 VVMKK 260
+++
Sbjct: 258 KTIRR 262
>gi|253997359|ref|YP_003049423.1| NAD-dependent epimerase/dehydratase [Methylotenera mobilis JLW8]
gi|253984038|gb|ACT48896.1| NAD-dependent epimerase/dehydratase [Methylotenera mobilis JLW8]
Length = 315
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 22/249 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQ--PYHPRNDDE 80
V G SG++GS + KL G + + R + L L ++ V YH N
Sbjct: 8 VLGGSGFVGSAIVAKLDAAGYAVTVLTRRR-EAAKHLFLLPNVTVVECDVLDYHALN--- 63
Query: 81 IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
++ ++ VINLIG + + + ++PA+LA++ ++G+++ I +S+L A +
Sbjct: 64 --TVLRGTDAVINLIGILHQGHHASFNAIHHQLPAQLAKICADLGIKRLIQMSSLGAHEH 121
Query: 141 PPTYYISGGSQFYRTKYQGEKEV--LREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P SQ+ RTK GE + L++ TIF+PS ++G GDKF + + +
Sbjct: 122 AP-------SQYLRTKAAGEAALKALQDKINITIFKPSIIFGRGDKFTNLFATL----IK 170
Query: 199 KLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
L V + K QP++V DVA+ V + ++ D G+ Y+ GPK Y ELL V
Sbjct: 171 LLPVVVLAKPNAKFQPIWVEDVASCFVNSLQNMDTYGQTYELAGPKVYTFRELLQQIMHV 230
Query: 258 MKKGEPDYG 266
+ P G
Sbjct: 231 LSIQRPIIG 239
>gi|421588315|ref|ZP_16033615.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium sp. Pop5]
gi|403706999|gb|EJZ22117.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium sp. Pop5]
Length = 326
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R + I +A++ ++ VIN +G T T DA E R + +HISA+
Sbjct: 64 RYRNSIDRAVEGASHVINCVGILHETGRNTF-DAVQEFGGRAVAEAARNAGAGLVHISAI 122
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD S + RTK + E + P+A IFRPS ++G D F + M R
Sbjct: 123 GADAKSV-------SDYGRTKGRAEAAIHSIKPDAVIFRPSIVFGPEDSFFNKFADMAR- 174
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ G +T QPVYV D+A A+ A A GKIY+ GP+ E L+
Sbjct: 175 -MSPVLPLVGGGKTKFQPVYVEDIAEAVARAVDGKVAGGKIYELGGPEVLTFRECLEMML 233
Query: 256 VVMKKGEP 263
V + P
Sbjct: 234 KVTNRKNP 241
>gi|103487617|ref|YP_617178.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Sphingopyxis
alaskensis RB2256]
gi|98977694|gb|ABF53845.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Sphingopyxis
alaskensis RB2256]
Length = 312
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 122/245 (49%), Gaps = 27/245 (11%)
Query: 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQ 71
+F+G + TV G G++G Y+ +L +G+++ I R D R L+ G LGQ F
Sbjct: 3 TFDGQLITVLGGGGFLGRYVVQRLLARGARVRIAQR----DPRAATFLKPLGGLGQTQFV 58
Query: 72 PYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIH 131
R+ + +A++ S+ VINL+G F AD + A +K G +H
Sbjct: 59 HADVRDAASVARAVQGSDAVINLVG-AFDDMRAVQADGAGHV----ATTAKAAGARALVH 113
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGH 191
+SA+ AD + P+ Y R+K GE V F A I RPS ++G D+F+ +
Sbjct: 114 VSAIGADRDSPSAY-------GRSKGDGEAAVRAAFTGAAILRPSIIFGREDRFINRFAG 166
Query: 192 MWR--HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
M R V +A K QPVYVGDVA A+VAA D A G++++ GP+ + E
Sbjct: 167 MMRLAPVMPVIAPQAK-----FQPVYVGDVADAVVAALAD-TATGRLFELGGPQVLTMRE 220
Query: 250 LLDWF 254
LL W
Sbjct: 221 LLRWI 225
>gi|39933125|ref|NP_945401.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Rhodopseudomonas palustris CGA009]
gi|39652750|emb|CAE25489.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Rhodopseudomonas palustris CGA009]
Length = 321
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 16/234 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ + L ++ +I + R L+ G +GQ+ + R +
Sbjct: 8 LVTVFGGSGFLGRHVVSALARRDYRIRVAVRRPEL-AGHLQPLGRVGQIHAVQANLRYPE 66
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A++ S+V INL+G E + F + A S + +H+SA+ A
Sbjct: 67 SVAAAMRGSHVAINLVGILAEGGAQKFDAVQGSGAATVAQAAASVG---ARMVHVSAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D N P Y R+K GE+ VL P+ATIFRPS ++G D+F + + R
Sbjct: 124 DANSPARY-------ARSKAAGEQAVLAAVPQATIFRPSVVFGPEDQFTNRFAMLARM-- 174
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ G +T QPVYVGDVA AI A G Y+ GP+ + E++
Sbjct: 175 -SPVLPLVGADTKLQPVYVGDVATAIADAVDGLAKPGATYELGGPEELTMREIM 227
>gi|395490618|ref|ZP_10422197.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingomonas
sp. PAMC 26617]
Length = 311
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
N + T+ G G++G Y+ L ++G+++ I R + + L+ G LGQ F
Sbjct: 1 MNDKLVTLIGGGGFLGRYVAQALLERGARVRIAQR-DPHQAFFLKTQGGLGQTQFVAVDI 59
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ I +A+ ++ V+NL+G + +F V+ +A + GVE +H+SA+
Sbjct: 60 TKPESIARAVAGADAVVNLVG--ILSGDFQ--KIQVDGARIVAEAAARAGVESLVHMSAI 115
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD + Y R+K GE V FP ATI RPS ++G D+FL + M
Sbjct: 116 GADSASESAY-------GRSKGDGEAAVRAAFPAATILRPSIVFGREDQFLNRFAAMIGS 168
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD-AAGKIYQAVGPKRYLLSELLDWF 254
+ V + G T QPVYVGDVA A+V A +P AAGK ++ GP + L+ W
Sbjct: 169 A-PIVPVLRTG--TKFQPVYVGDVAQAVVKALDEPAIAAGKTFELGGPDTITMGALVRWI 225
>gi|306840220|ref|ZP_07472995.1| NADH-ubiquinone oxidoreductase [Brucella sp. BO2]
gi|306846242|ref|ZP_07478804.1| NADH-ubiquinone oxidoreductase [Brucella inopinata BO1]
gi|306273493|gb|EFM55354.1| NADH-ubiquinone oxidoreductase [Brucella inopinata BO1]
gi|306289825|gb|EFM61004.1| NADH-ubiquinone oxidoreductase [Brucella sp. BO2]
Length = 328
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 14 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEIAYY----MAPLGNVGQIQMVQANVR 69
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + + +K S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 70 HRGSVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEGI-RMTHLSSLA 128
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P+ Y RTK +GE V P+ I RPS ++G D+F + +M R
Sbjct: 129 ADVNSPSAY-------ARTKAEGEIAVQSVLPDTVILRPSIIFGHEDRFFNRFANMAR-- 179
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+ A G IY+ GP
Sbjct: 180 FSPFLPVIGGGETKLQPVYVGDVAEAVARAVDGKLMPGGIYELGGP 225
>gi|404252338|ref|ZP_10956306.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingomonas
sp. PAMC 26621]
Length = 311
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
N + T+ G G++G Y+ L ++G+++ I R + + L+ G LGQ F
Sbjct: 1 MNDKLVTLIGGGGFLGRYVAQALLERGARVRIAQR-DPHQAFFLKTQGGLGQTQFVAVDI 59
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ I +A+ ++ V+NL+G + +F V+ +A + GVE +H+SA+
Sbjct: 60 TKPESIARAVAGADAVVNLVG--ILSGDFQ--KIQVDGARIVAEAAARAGVETLVHMSAI 115
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD + Y R+K GE V FP ATI RPS ++G D+FL + M
Sbjct: 116 GADSASESAY-------GRSKGDGEAAVRAAFPAATILRPSIVFGREDQFLNRFAAMIGS 168
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD-AAGKIYQAVGPKRYLLSELLDWF 254
+ V + G T QPVYVGDVA A+V A +P AAGK ++ GP + L+ W
Sbjct: 169 A-PIVPVLRTG--TKFQPVYVGDVAQAVVKALDEPAIAAGKTFELGGPDTITMGALVRWI 225
>gi|424873305|ref|ZP_18296967.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393169006|gb|EJC69053.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 326
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 112/248 (45%), Gaps = 19/248 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYNIRVAVRRPDLAGF-----LQPLGNVGQISFVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R I +A+ ++ V+N +G T T DA E AR + HISA+
Sbjct: 64 RYRSSIDRAVDGASHVVNCVGILHETGRNTF-DAVQEFGARAIAEAARGAGATLTHISAI 122
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD S + RTK + E +L P+A IFRPS ++G D F + M R
Sbjct: 123 GADAK-------SDSDYGRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFAEMAR- 174
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ G +T QPVYV D+A A+ A A GK+Y+ GP+ E L+
Sbjct: 175 -MSPILPLIGGGKTKFQPVYVEDIAEAVARAVDGKVAGGKVYELGGPEVLSFRECLETML 233
Query: 256 VVMKKGEP 263
V + P
Sbjct: 234 KVTCRRNP 241
>gi|359787899|ref|ZP_09290886.1| NAD-dependent epimerase/dehydratase [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359256300|gb|EHK59165.1| NAD-dependent epimerase/dehydratase [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 324
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 119/239 (49%), Gaps = 19/239 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ L ++G ++ + R + L+ G++GQ+ + R
Sbjct: 10 LVTVFGGSGFLGRHVVQALARRGYRVRVASR-RPHLAGHLQPLGNVGQIQPIQANLRVRW 68
Query: 80 EIRKAIKYSNVVINLIGR--EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ +A++ ++ V+NL+G E + F+ A ++ AR + H+SAL A
Sbjct: 69 SVDRAVQGADHVVNLVGILYESGRQKFS---AVQDLGARAVAEAAHSAGAGLTHVSALGA 125
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D I G + + +TK +GE VL P+A I+RPS M+G D F + +M R F
Sbjct: 126 D-------IDGEAVYAKTKARGEAAVLETVPDAVIYRPSIMFGPEDGFFNRFANMAR--F 176
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD 252
+ G T QPVYVGDVA AI + G IY+ GP+ R + ++L+
Sbjct: 177 SPVLPLIGGGATKFQPVYVGDVAEAIARSVDGQVKGGTIYELGGPRIMSFRQCMEQMLE 235
>gi|124268480|ref|YP_001022484.1| nucleoside-diphosphate-sugar epimerase [Methylibium petroleiphilum
PM1]
gi|124261255|gb|ABM96249.1| nucleoside-diphosphate-sugar epimerase [Methylibium petroleiphilum
PM1]
Length = 316
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 118/233 (50%), Gaps = 21/233 (9%)
Query: 23 VFGASGYMGSYLCNKL----GKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
+ G +G++GS LC KL G G+++ +P R R RL L V +D
Sbjct: 6 ILGGTGFVGSALCEKLVAHFGAAGARLTVPTR---RAERAKRLA-MLPTVELVETDLHDD 61
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + + + VINL+ + +V +P RLAR K GV + +H+SAL A
Sbjct: 62 GRLTRLLFGRDAVINLVAILHGSAE-EFERVHVALPQRLARACKVAGVPRVVHVSALGAA 120
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
+ P+ Y+ R+K GE + + T+ RPS ++GSGD+FL + + + VF
Sbjct: 121 ADAPSNYL-------RSKAAGEAALRAAGLDLTVLRPSVIFGSGDRFLNLFAQL-QAVFP 172
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ + G + QPV+V DVAAAIV + P A ++ + VGP Y L+EL+
Sbjct: 173 LMPL--AGADAKFQPVWVEDVAAAIVRSLVSP--APEVVECVGPHVYTLAELV 221
>gi|254435181|ref|ZP_05048688.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Nitrosococcus
oceani AFC27]
gi|207088292|gb|EDZ65564.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Nitrosococcus
oceani AFC27]
Length = 306
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 17/235 (7%)
Query: 30 MGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSN 89
MG +L + L +QG ++ + R ++ RDL + L + Y P ++
Sbjct: 1 MGRWLSSHLVEQGYKVRVLTR-HWQRHRDLLVLPGLRLMETDVYDP---AQLAAQFNGCQ 56
Query: 90 VVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYIS 147
VINLIG E + ++P ++A++ + G+++ +H+SALNAD N
Sbjct: 57 SVINLIGILNEKGRNGHGFRQVHADLPEKVAQICLDTGIKRLLHMSALNADAN------Q 110
Query: 148 GGSQFYRTKYQGEKEVL---REFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYK 204
G S + R+K +GE VL R+ E TIF+PS ++G GD F +G + +
Sbjct: 111 GASYYLRSKGEGENRVLALARQGLEVTIFQPSVIFGPGDSFFNRFGSLLK--LSPFIFPL 168
Query: 205 KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
E PVYVGDVA A A D + + Y+ GPK Y L +L+++ V++
Sbjct: 169 ACPEARLTPVYVGDVARAFARALSDKEDFSQSYELCGPKIYTLKQLVEYTAKVLE 223
>gi|261753984|ref|ZP_05997693.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 3 str. 686]
gi|261743737|gb|EEY31663.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 3 str. 686]
Length = 333
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEIAYY----MAPLGNVGQIQMVQANVR 74
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + + +K S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 75 HRGSVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEGI-RMTHLSSLA 133
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P+ Y RTK +GE V P+ + RPS ++G D+F + +M R
Sbjct: 134 ADVNSPSAY-------ARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMAR-- 184
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+ A G IY+ GP
Sbjct: 185 FSPFLPVIGGGETKLQPVYVGDVAEAVARAVDGKLMPGGIYELGGP 230
>gi|237817411|ref|ZP_04596403.1| NAD-dependent epimerase/dehydratase [Brucella abortus str. 2308 A]
gi|260545103|ref|ZP_05820924.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella abortus
NCTC 8038]
gi|260565084|ref|ZP_05835569.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
bv. 1 str. 16M]
gi|260756217|ref|ZP_05868565.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 6 str.
870]
gi|260760414|ref|ZP_05872762.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 4 str.
292]
gi|260763654|ref|ZP_05875986.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 2 str.
86/8/59]
gi|260882041|ref|ZP_05893655.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 9 str.
C68]
gi|261220849|ref|ZP_05935130.1| NAD-dependent epimerase/dehydratase [Brucella ceti B1/94]
gi|261312908|ref|ZP_05952105.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis
M163/99/10]
gi|261318303|ref|ZP_05957500.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis B2/94]
gi|261322738|ref|ZP_05961935.1| NAD-dependent epimerase/dehydratase [Brucella neotomae 5K33]
gi|261750729|ref|ZP_05994438.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 5 str. 513]
gi|265986101|ref|ZP_06098658.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis
M292/94/1]
gi|265990330|ref|ZP_06102887.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992563|ref|ZP_06105120.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 3 str.
Ether]
gi|265995795|ref|ZP_06108352.1| NAD-dependent epimerase/dehydratase [Brucella ceti M490/95/1]
gi|265998997|ref|ZP_05464603.2| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
bv. 2 str. 63/9]
gi|237788224|gb|EEP62440.1| NAD-dependent epimerase/dehydratase [Brucella abortus str. 2308 A]
gi|260098374|gb|EEW82248.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella abortus
NCTC 8038]
gi|260152727|gb|EEW87820.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
bv. 1 str. 16M]
gi|260670732|gb|EEX57672.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 4 str.
292]
gi|260674075|gb|EEX60896.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 2 str.
86/8/59]
gi|260676325|gb|EEX63146.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 6 str.
870]
gi|260871569|gb|EEX78638.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 9 str.
C68]
gi|260919433|gb|EEX86086.1| NAD-dependent epimerase/dehydratase [Brucella ceti B1/94]
gi|261297526|gb|EEY01023.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis B2/94]
gi|261298718|gb|EEY02215.1| NAD-dependent epimerase/dehydratase [Brucella neotomae 5K33]
gi|261301934|gb|EEY05431.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis
M163/99/10]
gi|261740482|gb|EEY28408.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 5 str. 513]
gi|262550092|gb|EEZ06253.1| NAD-dependent epimerase/dehydratase [Brucella ceti M490/95/1]
gi|262763433|gb|EEZ09465.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 3 str.
Ether]
gi|263000999|gb|EEZ13689.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 1 str.
Rev.1]
gi|263091761|gb|EEZ16092.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
bv. 2 str. 63/9]
gi|264658298|gb|EEZ28559.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis
M292/94/1]
Length = 333
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEIAYY----MAPLGNVGQIQMVQANVR 74
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + + +K S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 75 HRGSVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEGI-RMTHLSSLA 133
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P+ Y RTK +GE V P+ + RPS ++G D+F + +M R
Sbjct: 134 ADVNSPSAY-------ARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMAR-- 184
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+ A G IY+ GP
Sbjct: 185 FSPFLPVIGGGETKLQPVYVGDVAEAVARAVDGKLMPGGIYELGGP 230
>gi|297182778|gb|ADI18932.1| predicted nucleoside-diphosphate-sugar epimerases [uncultured SAR11
cluster bacterium HF0010_09O16]
Length = 318
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 114/232 (49%), Gaps = 14/232 (6%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
++G SG +G +L KL K ++ + R ++ G+ G + + ++ +IR
Sbjct: 8 IWGGSGQIGRHLIRKLTKNEYRVTVVTRNIHQKGLLIKSQGNQGWINVVEANIFDEKKIR 67
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ +++ INLIG + K T + + P+ LA+L KE +E+FIH+SAL D
Sbjct: 68 SLFQEADICINLIGILYEKKGSTFENIHTLFPSILAKLCKEYNLEQFIHLSALGVDK--- 124
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
+ S + ++K +GEK++L+ FP +TI RPS +Y S D F + +L V
Sbjct: 125 ----AIDSNYAKSKLEGEKKILKNFPLSTILRPSLVYSSSDSF----STTMMTLLSRLPV 176
Query: 203 YKK--GEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ +T+ P++ D+ I + +I + VGP+ E+L+
Sbjct: 177 FPLYYSGKTLFMPIHAKDLVDIIFNVV-SKNTNSQIIECVGPETMTFKEILE 227
>gi|17988603|ref|NP_541236.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Brucella melitensis
bv. 1 str. 16M]
gi|83269846|ref|YP_419137.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Brucella melitensis
biovar Abortus 2308]
gi|148558780|ref|YP_001257950.1| putative NADH-ubiquinone oxidoreductase [Brucella ovis ATCC 25840]
gi|163845154|ref|YP_001622809.1| hypothetical protein BSUIS_B1036 [Brucella suis ATCC 23445]
gi|189023119|ref|YP_001932860.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella abortus
S19]
gi|225686795|ref|YP_002734767.1| NADH-ubiquinone oxidoreductase [Brucella melitensis ATCC 23457]
gi|256015800|ref|YP_003105809.1| NADH-ubiquinone oxidoreductase [Brucella microti CCM 4915]
gi|261216481|ref|ZP_05930762.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 3 str.
Tulya]
gi|294853993|ref|ZP_06794665.1| NADH-ubiquinone oxidoreductase [Brucella sp. NVSL 07-0026]
gi|297249197|ref|ZP_06932898.1| NADH-ubiquinone oxidoreductase [Brucella abortus bv. 5 str. B3196]
gi|340792803|ref|YP_004758267.1| NADH-ubiquinone oxidoreductase [Brucella pinnipedialis B2/94]
gi|376271538|ref|YP_005114583.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella abortus
A13334]
gi|384213554|ref|YP_005602637.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
M5-90]
gi|384410656|ref|YP_005599276.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
M28]
gi|384447153|ref|YP_005661371.1| NADH-ubiquinone oxidoreductase [Brucella melitensis NI]
gi|423168227|ref|ZP_17154929.1| hypothetical protein M17_01916 [Brucella abortus bv. 1 str. NI435a]
gi|423172338|ref|ZP_17159012.1| hypothetical protein M19_02870 [Brucella abortus bv. 1 str. NI474]
gi|423173931|ref|ZP_17160601.1| hypothetical protein M1A_01328 [Brucella abortus bv. 1 str. NI486]
gi|423175807|ref|ZP_17162473.1| hypothetical protein M1E_00069 [Brucella abortus bv. 1 str. NI488]
gi|423181767|ref|ZP_17168407.1| hypothetical protein M1G_02866 [Brucella abortus bv. 1 str. NI010]
gi|423184900|ref|ZP_17171536.1| hypothetical protein M1I_02868 [Brucella abortus bv. 1 str. NI016]
gi|423188053|ref|ZP_17174666.1| hypothetical protein M1K_02870 [Brucella abortus bv. 1 str. NI021]
gi|423190470|ref|ZP_17177079.1| hypothetical protein M1M_02151 [Brucella abortus bv. 1 str. NI259]
gi|17984404|gb|AAL53500.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Brucella melitensis
bv. 1 str. 16M]
gi|82940120|emb|CAJ13168.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Brucella melitensis
biovar Abortus 2308]
gi|148370065|gb|ABQ62937.1| putative NADH-ubiquinone oxidoreductase [Brucella ovis ATCC 25840]
gi|163675877|gb|ABY39987.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189021693|gb|ACD74414.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella abortus
S19]
gi|225642900|gb|ACO02813.1| NADH-ubiquinone oxidoreductase [Brucella melitensis ATCC 23457]
gi|255998460|gb|ACU50147.1| NADH-ubiquinone oxidoreductase, putative [Brucella microti CCM
4915]
gi|260918088|gb|EEX84949.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 3 str.
Tulya]
gi|294819648|gb|EFG36648.1| NADH-ubiquinone oxidoreductase [Brucella sp. NVSL 07-0026]
gi|297173066|gb|EFH32430.1| NADH-ubiquinone oxidoreductase [Brucella abortus bv. 5 str. B3196]
gi|326411203|gb|ADZ68267.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
M28]
gi|326554494|gb|ADZ89133.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
M5-90]
gi|340561262|gb|AEK56499.1| NADH-ubiquinone oxidoreductase, putative [Brucella pinnipedialis
B2/94]
gi|349745150|gb|AEQ10692.1| NADH-ubiquinone oxidoreductase [Brucella melitensis NI]
gi|363402710|gb|AEW19679.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella abortus
A13334]
gi|374536760|gb|EHR08280.1| hypothetical protein M19_02870 [Brucella abortus bv. 1 str. NI474]
gi|374538720|gb|EHR10227.1| hypothetical protein M17_01916 [Brucella abortus bv. 1 str. NI435a]
gi|374539932|gb|EHR11434.1| hypothetical protein M1A_01328 [Brucella abortus bv. 1 str. NI486]
gi|374546357|gb|EHR17817.1| hypothetical protein M1G_02866 [Brucella abortus bv. 1 str. NI010]
gi|374547200|gb|EHR18659.1| hypothetical protein M1I_02868 [Brucella abortus bv. 1 str. NI016]
gi|374554233|gb|EHR25646.1| hypothetical protein M1K_02870 [Brucella abortus bv. 1 str. NI021]
gi|374556510|gb|EHR27915.1| hypothetical protein M1M_02151 [Brucella abortus bv. 1 str. NI259]
gi|374556607|gb|EHR28011.1| hypothetical protein M1E_00069 [Brucella abortus bv. 1 str. NI488]
Length = 328
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 14 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEIAYY----MAPLGNVGQIQMVQANVR 69
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + + +K S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 70 HRGSVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEGI-RMTHLSSLA 128
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P+ Y RTK +GE V P+ + RPS ++G D+F + +M R
Sbjct: 129 ADVNSPSAY-------ARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMAR-- 179
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+ A G IY+ GP
Sbjct: 180 FSPFLPVIGGGETKLQPVYVGDVAEAVARAVDGKLMPGGIYELGGP 225
>gi|23500763|ref|NP_700203.1| NADH-ubiquinone oxidoreductase [Brucella suis 1330]
gi|376278986|ref|YP_005109019.1| NADH-ubiquinone oxidoreductase, putative [Brucella suis VBI22]
gi|384223546|ref|YP_005614711.1| NADH-ubiquinone oxidoreductase [Brucella suis 1330]
gi|23464418|gb|AAN34208.1| NADH-ubiquinone oxidoreductase, putative [Brucella suis 1330]
gi|343384994|gb|AEM20485.1| NADH-ubiquinone oxidoreductase, putative [Brucella suis 1330]
gi|358260424|gb|AEU08157.1| NADH-ubiquinone oxidoreductase, putative [Brucella suis VBI22]
Length = 328
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 14 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEIAYY----MAPLGNVGQIQMVQANVR 69
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + + +K S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 70 HRGSVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEGI-RMTHLSSLA 128
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P+ Y RTK +GE V P+ + RPS ++G D+F + +M R
Sbjct: 129 ADVNSPSAY-------ARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMAR-- 179
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+ A G IY+ GP
Sbjct: 180 FSPFLPVIGGGETKLQPVYVGDVAEAVARAVDGKLMPGGIYELGGP 225
>gi|316931441|ref|YP_004106423.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
DX-1]
gi|315599155|gb|ADU41690.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
DX-1]
Length = 321
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 16/234 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ + L ++ +I + R L+ G +GQ+ + R +
Sbjct: 8 LVTVFGGSGFLGRHIVSALARRDYRIRVAVRRPEL-AGHLQPLGRVGQIHAVQANLRYPE 66
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A++ ++V INL+G E + F N A S + +H+SA+ A
Sbjct: 67 SVAAAMRGAHVAINLVGILAEGGAQKFDAVQGNGAASVAQAAASVG---ARMVHVSAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DP+ P Y R+K GE+ V P+ATIFRPS ++G D+F + + R
Sbjct: 124 DPDSPARY-------ARSKAAGERAVHEAVPQATIFRPSVVFGPEDQFTNRFAALARM-- 174
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ G +T QPVYVGDVA AI A G +Y+ GP+ + E++
Sbjct: 175 -SPVLPLVGADTKLQPVYVGDVATAIADAVDGLARPGAVYELGGPEVLTMREIM 227
>gi|309780278|ref|ZP_07675029.1| NADH-ubiquinone oxidoreductase [Ralstonia sp. 5_7_47FAA]
gi|404394878|ref|ZP_10986681.1| hypothetical protein HMPREF0989_03092 [Ralstonia sp. 5_2_56FAA]
gi|308920981|gb|EFP66627.1| NADH-ubiquinone oxidoreductase [Ralstonia sp. 5_7_47FAA]
gi|348613942|gb|EGY63511.1| hypothetical protein HMPREF0989_03092 [Ralstonia sp. 5_2_56FAA]
Length = 334
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 115/255 (45%), Gaps = 45/255 (17%)
Query: 23 VFGASGYMGSYLCNKL--------GKQGSQIIIPYRG-------NF-----YDVRDLRL- 61
+FG +G++GS L ++L G ++I+P R N DV D +
Sbjct: 8 IFGGTGFIGSQLLSRLVTETFSAPGLPEGRMIVPTRDPESARAHNLTLLPRVDVMDADIY 67
Query: 62 CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNF----TIADANVEIPARL 117
D LF R + VINL+G T+ +V++P R+
Sbjct: 68 ADDALDALFLALTERGAEHC--------AVINLVGVLQDTREMPYGPNFQRVHVDLPRRI 119
Query: 118 ARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSD 177
+ GV + +H+SAL ADP P+ Y+ R+K GE+ V+ + T+FRPS
Sbjct: 120 VAACRRHGVNRLLHMSALGADPAGPSMYL-------RSKGDGERVVMNSELDWTVFRPSV 172
Query: 178 MYGSGDKFLRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI 236
++G D FL + M R F LA + QPVYV DVAAA + A K P
Sbjct: 173 VFGPQDHFLNLFASMQRMAPFVPLAC----ADARFQPVYVDDVAAAFINALKKPATIRHA 228
Query: 237 YQAVGPKRYLLSELL 251
Y VGP+ Y L+EL+
Sbjct: 229 YPLVGPRVYTLAELM 243
>gi|344339392|ref|ZP_08770321.1| NAD-dependent epimerase/dehydratase [Thiocapsa marina 5811]
gi|343800696|gb|EGV18641.1| NAD-dependent epimerase/dehydratase [Thiocapsa marina 5811]
Length = 300
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 115/235 (48%), Gaps = 16/235 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++G +L N L G + +P R + + RDLRL V + + ++ +
Sbjct: 7 CVIGGTGFVGRHLLNILSGAGYRTRVPTR-HPHRYRDLRLVPGCELVQLEQW---DEAGL 62
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+ + V+NL+G T ++V + R + GV ++H+SALNADP
Sbjct: 63 ADLMVGCDAVVNLVGILNEGGGRTFEQSHVGMVESTVRGALAAGVGAYLHMSALNADPAG 122
Query: 142 PTYYISGGSQFYRTKYQGE---KEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P+ Y+ R+K +GE + T+FRPS ++G GD + + R +
Sbjct: 123 PSDYL-------RSKGRGEAVASAAAEQGLAVTVFRPSVIFGPGDGLFNRFASLLRLLPG 175
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ + PVYVGDVAAA++ +DP + G+IY+ GP+ + L ++L +
Sbjct: 176 PFPL--ACADARFAPVYVGDVAAAMLRTLRDPASRGQIYELCGPRTFALRDILTY 228
>gi|406924714|gb|EKD61413.1| NADH-ubiquinone oxidoreductase, partial [uncultured bacterium]
Length = 183
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T++G SG++G Y+ ++ K+G ++ I R + ++ G +GQV + R+D +
Sbjct: 6 TIYGGSGFVGRYIARRMAKEGWRVRIACR-RPNEALFVKSYGAVGQVEPVLCNIRDDASV 64
Query: 82 RKAIKYSNVVINLIGR--EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
R + ++ V+N +G NFT A E R+AR++ E GV +HISAL AD
Sbjct: 65 RSVMAGADAVVNCVGTFDRGGKNNFTAVQA--EGAGRIARIAAEQGVANLVHISALGADK 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
N GS + ++K +GE +L FP A I RPS ++G+ D F +G M
Sbjct: 123 NA-------GSLYAQSKGEGEAAILAAFPHAMILRPSVIFGNEDGFFNRFGGM 168
>gi|326386973|ref|ZP_08208585.1| NAD-dependent epimerase/dehydratase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208556|gb|EGD59361.1| NAD-dependent epimerase/dehydratase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 317
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 21/243 (8%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR--GNFYDVRDLRLCGDLGQV 68
G + G V + G +G+ G++L +L +G+++ + R ++V+ L G+LG V
Sbjct: 4 GRKRDLEGKVIALIGGTGFFGTHLAQELLDRGARLRVASRHPSEGFNVKPL---GNLGSV 60
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+ + V+NL+G F+ I ++A ++K G +
Sbjct: 61 QIVAVDVTKPHTLEVVFTGVDAVVNLVG-AFSGDLDAIQGRGA---GQVAAIAKARGAKA 116
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
F+HISA+ AD Y RTK +GE VL FPEA I RPS ++G D FL
Sbjct: 117 FVHISAIGADAGSSVAY-------ARTKAEGETAVLAAFPEAVILRPSVLFGVDDTFLNM 169
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLL 247
+G + + L V+ E+ QP+ V D A AI P+A AGK Y+ GP+ +
Sbjct: 170 FGGLMK--LPVLPVFAP--ESQLQPLDVDDAAEAIGNVLAKPEAFAGKTYELAGPEALTV 225
Query: 248 SEL 250
EL
Sbjct: 226 LEL 228
>gi|377822007|ref|YP_004978378.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. YI23]
gi|357936842|gb|AET90401.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. YI23]
Length = 318
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 119/246 (48%), Gaps = 25/246 (10%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G SG++GS+L N L G + I R L D V+ H D +
Sbjct: 7 ALIGGSGFIGSHLVNALVDLGKNVRIATRRRVNAAHLTLLPVD---VIETDVH----DPV 59
Query: 82 RKA--IKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ A I S+ VINL+G R A A+VE+P ++A + GV + +H+SA+
Sbjct: 60 KLAAFIDQSDAVINLVGVLQGRRDDPYGPEFAKAHVELPHKIAAACEAKGVRRLLHMSAI 119
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADP P+ Y+ R+K GEK V + TIFR S ++G D L + + R
Sbjct: 120 GADPQGPSMYL-------RSKGDGEKIVRESGLDWTIFRSSVVFGPEDNLLNQFAFLER- 171
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGK-IYQAVGPKRYLLSELLDWF 254
VF + + E QPV+VGDVA A+V D DAA + +Y+ GP Y L+EL+ +
Sbjct: 172 VFPVIPLACADAEF--QPVFVGDVAKAMVNVL-DLDAANRQVYELAGPSVYTLAELVRFA 228
Query: 255 HVVMKK 260
+ K
Sbjct: 229 GATIGK 234
>gi|225629491|ref|ZP_03787524.1| NAD-dependent epimerase/dehydratase [Brucella ceti str. Cudo]
gi|261757227|ref|ZP_06000936.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella sp. F5/99]
gi|225615987|gb|EEH13036.1| NAD-dependent epimerase/dehydratase [Brucella ceti str. Cudo]
gi|261737211|gb|EEY25207.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella sp. F5/99]
Length = 333
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEIAYY----MAPLGNVGQIQMVQANVR 74
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + + +K S+ V+NL+G + + +A +K G+ + H+S+L
Sbjct: 75 HRGSVERVVKGSDHVVNLVGILAESGRQRFNAVQMLGAKHIAEAAKAEGI-RMTHLSSLA 133
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P+ Y RTK +GE V P+ + RPS ++G D+F + +M R
Sbjct: 134 ADVNSPSAY-------ARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMAR-- 184
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+ A G IY+ GP
Sbjct: 185 FSPFLPVIGGGETKLQPVYVGDVAEAVARAVDGKLMPGGIYELGGP 230
>gi|189194571|ref|XP_001933624.1| NADH-ubiquinone oxidoreductase 40 kd subunit precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187979188|gb|EDU45814.1| NADH-ubiquinone oxidoreductase 40 kd subunit precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 274
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 13/175 (7%)
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
RN I +++++S++V NLIGR++ TKNF + D +V R+ + +++F+ +S+
Sbjct: 4 RNTQSIEESVRHSDIVYNLIGRDYPTKNFDLEDVHVSGTERIVDAVAKYDIDRFVQVSSH 63
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
+A P S+FYRTK +GE +PE TI RP+ M+G D+FL R
Sbjct: 64 SAHP-------ESESEFYRTKARGEIVARSIYPETTIVRPAPMFGFEDRFLH------RL 110
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ + +PV+V DV A+ D A + Y+ GP Y ++E+
Sbjct: 111 ASPSNIITANNLQERSRPVHVIDVGMALERMLHDDTTAAQTYELYGPTEYSMAEV 165
>gi|357025698|ref|ZP_09087815.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [Mesorhizobium
amorphae CCNWGS0123]
gi|355542403|gb|EHH11562.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [Mesorhizobium
amorphae CCNWGS0123]
Length = 324
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 120/244 (49%), Gaps = 17/244 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ VFG SG++G ++ L K+G +I +P R L+ G++GQ+ + R
Sbjct: 10 LVVVFGGSGFVGRHVVRALAKRGYRIRVPVRRPDL-AGHLQPLGNVGQIQPVQANVRVRW 68
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISALN 136
+ +A++ ++ VINL+ E + F+ A E +R +A ++ +G HISAL
Sbjct: 69 SVDRAVQGADHVINLVAILHESGRQKFS---AVHEFGSRAIAEAARSVGA-GLTHISALG 124
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N S + RTK GEK VL +A IFRPS +G D F + M R
Sbjct: 125 ADLN-------AQSDYARTKALGEKAVLETIADAVIFRPSINFGPEDAFFNRFAGMAR-- 175
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
+ + G T QPVYVGDVA A+ + + G+IY+ GP+ E ++
Sbjct: 176 YSPVLPLLGGGLTKFQPVYVGDVAEAVARSVEGKVEGGRIYELGGPQVLTFKECMEELLT 235
Query: 257 VMKK 260
V+++
Sbjct: 236 VIER 239
>gi|187930726|ref|YP_001901213.1| NADH dehydrogenase [Ralstonia pickettii 12J]
gi|187727616|gb|ACD28781.1| NADH dehydrogenase [Ralstonia pickettii 12J]
Length = 334
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 117/257 (45%), Gaps = 49/257 (19%)
Query: 23 VFGASGYMGSYLCNKL--------GKQGSQIIIPYRG-------NF-----YDVRDLRL- 61
+FG +G++GS L ++L G ++I+P R N DV D +
Sbjct: 8 IFGGTGFIGSQLLSRLVTETFSAPGLPEGRMIVPTRDPESSRAHNLTLLPRVDVMDADIY 67
Query: 62 CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG-----REFA-TKNFTIADANVEIPA 115
D LF R + VINL+G RE NF +V++P
Sbjct: 68 ADDALDALFLALTERGGEHC--------AVINLVGVLQDAREMPYGPNFQ--RVHVDLPR 117
Query: 116 RLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRP 175
R+ + GV + +H+SAL ADP P+ Y+ R+K GE+ V+ + T+FRP
Sbjct: 118 RIVAACRRHGVNRLLHMSALGADPAGPSMYL-------RSKGDGERVVMNSELDWTVFRP 170
Query: 176 SDMYGSGDKFLRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG 234
S ++G D FL + M R F LA + QPVYV DVAAA + A K P
Sbjct: 171 SVVFGPQDHFLNLFASMQRMAPFVPLAC----ADARFQPVYVDDVAAAFINALKKPATIR 226
Query: 235 KIYQAVGPKRYLLSELL 251
Y VGP+ Y L+EL+
Sbjct: 227 HAYPLVGPRVYTLAELM 243
>gi|114705625|ref|ZP_01438528.1| putative oxidoreductase protein [Fulvimarina pelagi HTCC2506]
gi|114538471|gb|EAU41592.1| putative oxidoreductase protein [Fulvimarina pelagi HTCC2506]
Length = 335
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 15/239 (6%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR 76
G VFG SG++G Y+ L K+G ++ I R L G++G +L + R
Sbjct: 5 TGKTVVVFGGSGFLGRYVTQALAKRGHRVRIACRRPDLAYHVL-TAGNIGAILPIQANLR 63
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ +A+K ++ V+NL+G + T + E +A ++ GV ISA+
Sbjct: 64 YPWSVERAVKGADHVVNLVGILAESGKQTFSGLQAEGARLIAEAARAEGV-NMTQISAIG 122
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD S++ RTK GEK V P+A I RPS ++G D+F + M R
Sbjct: 123 ADEG-------SNSKYARTKAAGEKAVHAARPDAYILRPSIVFGPEDEFFNRFAEMSR-- 173
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELL 251
F + G +T QP+YV DVA A+ + A G +Y+ GP+ R L+ E+L
Sbjct: 174 FSPVLPLLGGGKTKFQPIYVVDVAEAVAKTVDNEVAGGTVYELGGPEVLSFRQLMEEML 232
>gi|402490668|ref|ZP_10837457.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. CCGE 510]
gi|401810694|gb|EJT03067.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. CCGE 510]
Length = 326
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 112/248 (45%), Gaps = 19/248 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYNIRVAVRRPDLAGF-----LQPLGNVGQISFVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R I +A+ ++ V+N +G T T DA E AR + HISA+
Sbjct: 64 RYRSSIDRAVDGASHVVNCVGILHETGRNTF-DAVQEFGARAVAEAARGAGATLTHISAI 122
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
A+ N + Y RTK + E +L P+A I RPS ++G D F + M R
Sbjct: 123 GANANSESGY-------GRTKGRAETAILSIKPDAVILRPSIVFGPEDSFFNKFADMAR- 174
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ G +T QPVYV D+A A+ A A GK+Y+ GP+ E L+
Sbjct: 175 -MSPILPLVGGGKTKFQPVYVEDIAEAVARAVDGKVAGGKVYELGGPEVLSFRECLETML 233
Query: 256 VVMKKGEP 263
V + P
Sbjct: 234 KVTCRKNP 241
>gi|410694701|ref|YP_003625323.1| putative NADH UBIQUINONE OXIDOREDUCTASE 1 ALPHA SUBUNIT [Thiomonas
sp. 3As]
gi|294341126|emb|CAZ89527.1| putative NADH UBIQUINONE OXIDOREDUCTASE 1 ALPHA SUBUNIT [Thiomonas
sp. 3As]
Length = 330
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 117/246 (47%), Gaps = 26/246 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++GS L N L + +P R ++L L V+ H +D ++
Sbjct: 8 VIGGSGFIGSRLVNALSLANHFVTVPTRRRQRARHLVQL--PLVDVVEIDVH--DDAKLA 63
Query: 83 KAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
K + + V+NL+G R A A+V++P R+A + GV + +H+SAL AD
Sbjct: 64 KLVAGRDAVVNLVGILQGRRGQPYGADFARAHVDLPRRIAAACAQQGVRRVVHMSALGAD 123
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFP-EATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
P+ Y+ R+K GE + + + TIFRPS ++G D FL + + R VF
Sbjct: 124 SKGPSMYL-------RSKGDGEAALKAQAGIDLTIFRPSVVFGPEDNFLNTFAKLQR-VF 175
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA---AGKIYQAVGPKRYLLSELL--- 251
V G +T PVYVGDV A ++ P A G+ Y+ GP Y L+EL+
Sbjct: 176 P--VVPLAGAKTRFAPVYVGDVVTAFASSLVGPQARETLGQTYELCGPGTYTLAELVRLS 233
Query: 252 -DWFHV 256
W V
Sbjct: 234 GQWARV 239
>gi|340779488|ref|ZP_08699431.1| NADH dehydrogenase (ubiquinone) [Acetobacter aceti NBRC 14818]
Length = 297
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 18/251 (7%)
Query: 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP--RND 78
ATVFG +G++G Y+ KL G I + R DLR GD+GQV+ P++ +N+
Sbjct: 7 ATVFGGAGFLGKYVVRKLAADGYAIRVACRRTDL-ANDLRQLGDVGQVV--PFYAPVQNE 63
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
D + + + ++VV+NL A + NVE AR+ARL+ GV+ F+H+SA+ A
Sbjct: 64 DAVAEVVSEASVVVNLAAILGAPSGAALNAVNVEGAARVARLAAAAGVQTFVHMSAIGAS 123
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P+ Y R++ GE+ V R FP ATI R S ++G D FL G + R+
Sbjct: 124 STSPSAY-------GRSRAAGEEGVTRHFPPATIVRASVLFGPEDHFLNMLGGVARYTPF 176
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACK----DPDAAGKIYQAVGPKRYLLSELLDWF 254
+ VY G T QPVYV DVA I + +P + + GP + + +
Sbjct: 177 VMPVY--GASTKLQPVYVADVAEVIRVIIRAFDENPSTRSNLCELGGPDILTMRAIAERV 234
Query: 255 HVVMKKGEPDY 265
+ + +P +
Sbjct: 235 LAMTGRNKPIF 245
>gi|261217625|ref|ZP_05931906.1| NAD-dependent epimerase/dehydratase [Brucella ceti M13/05/1]
gi|261320502|ref|ZP_05959699.1| NAD-dependent epimerase/dehydratase [Brucella ceti M644/93/1]
gi|260922714|gb|EEX89282.1| NAD-dependent epimerase/dehydratase [Brucella ceti M13/05/1]
gi|261293192|gb|EEX96688.1| NAD-dependent epimerase/dehydratase [Brucella ceti M644/93/1]
Length = 333
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEIAYY----MAPLGNVGQIQMVQANVR 74
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + + +K S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 75 HRGSVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEGI-RMTHLSSLA 133
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
D N P+ Y RTK +GE V P+ + RPS ++G D+F + +M R
Sbjct: 134 TDVNSPSAY-------ARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMAR-- 184
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+ A G IY+ GP
Sbjct: 185 FSPFLPVIGGGETKLQPVYVGDVAEAVARAVDGKLMPGGIYELGGP 230
>gi|241664916|ref|YP_002983276.1| NADH dehydrogenase [Ralstonia pickettii 12D]
gi|240866943|gb|ACS64604.1| NADH dehydrogenase [Ralstonia pickettii 12D]
Length = 334
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 115/255 (45%), Gaps = 45/255 (17%)
Query: 23 VFGASGYMGSYLCNKL--------GKQGSQIIIPYRG-------NF-----YDVRDLRL- 61
+FG +G++GS L ++L G ++I+P R N DV D +
Sbjct: 8 IFGGTGFIGSQLLSRLVTETFSAPGLPEGRMIVPTRDPESARAHNLTLLPRVDVMDADIY 67
Query: 62 CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNF----TIADANVEIPARL 117
D LF R + VINL+G ++ +V++P R+
Sbjct: 68 ADDALDALFLALTERGGEHC--------AVINLVGVLQDARDMPYGPNFQRVHVDLPRRI 119
Query: 118 ARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSD 177
+ GV + +H+SAL ADP P+ Y+ R+K GE+ V+ + T+FRPS
Sbjct: 120 VAACRRHGVNRLLHMSALGADPAGPSMYL-------RSKGDGERVVMNSELDWTVFRPSV 172
Query: 178 MYGSGDKFLRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI 236
++G D FL + M R F LA + QPVYV DVAAA + A K P
Sbjct: 173 VFGPQDHFLNLFASMQRMAPFVPLAC----ADARFQPVYVDDVAAAFINALKKPATIRHA 228
Query: 237 YQAVGPKRYLLSELL 251
Y VGP+ Y L+EL+
Sbjct: 229 YPLVGPRIYTLAELM 243
>gi|254504132|ref|ZP_05116283.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Labrenzia
alexandrii DFL-11]
gi|222440203|gb|EEE46882.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Labrenzia
alexandrii DFL-11]
Length = 326
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 14/243 (5%)
Query: 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY 73
+ NG + TVFG SG++G ++ L K+G ++ R L+ G GQ++
Sbjct: 3 TPLNGKLVTVFGGSGFLGRHIVQALSKRGYRVRAAVRRPDL-ANHLQPLGAPGQIMAVQA 61
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
+ R+ + +A++ ++ V+N +G T + P +A ++ G+ HIS
Sbjct: 62 NLRHRWSVDRAVQGADAVVNAVGILAPTGKQSFDAVQAFGPRAIAEAARAAGLNGITHIS 121
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ ADP S + R+K GE VL P++ I RPS ++G D F + M
Sbjct: 122 AIGADPE-------SASAYARSKAVGETGVLETLPDSIILRPSIVFGPEDNFFNQFAGMA 174
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSE 249
R + G ET QPVYV D+A A+ A G +Y+ GP+ R L +
Sbjct: 175 R--ISPVLPLVGGGETKFQPVYVCDIAEAVARAVDGTLQPGSVYELGGPEIKSFRDCLED 232
Query: 250 LLD 252
+L+
Sbjct: 233 MLE 235
>gi|405376833|ref|ZP_11030785.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
CF142]
gi|397326733|gb|EJJ31046.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
CF142]
Length = 326
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 121/247 (48%), Gaps = 22/247 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ +
Sbjct: 9 LVTVFGGSGFIGRHVVRVLAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISLVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISA 134
R + I +A++ ++ VIN +G F + T DA E R +A ++ +G HISA
Sbjct: 64 RYRNSIDRAVEGADHVINCVGILFESGRNTF-DAVQEFGGRAVAEAARSVGA-TLTHISA 121
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ A+ S + RTK + E +L P+A IFRPS ++G D F + M R
Sbjct: 122 IGANAG-------SNSNYGRTKGRAEAAILSIKPDAIIFRPSIVFGPEDSFFNKFADMAR 174
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW- 253
F L + G+ T QPVYV DVA A+ A GKIY+ GP+ E L+
Sbjct: 175 -TFPVLPLVGGGK-TKFQPVYVEDVAEAVARAVDGKVEGGKIYELGGPEVLTFRECLETI 232
Query: 254 FHVVMKK 260
V ++K
Sbjct: 233 LKVTVRK 239
>gi|456064331|ref|YP_007503301.1| NAD-dependent epimerase/dehydratase [beta proteobacterium CB]
gi|455441628|gb|AGG34566.1| NAD-dependent epimerase/dehydratase [beta proteobacterium CB]
Length = 302
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 116/235 (49%), Gaps = 15/235 (6%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++G L +L +G +++P R + R+LR+ + + E+
Sbjct: 7 LIGGNGFVGRVLAAQLQVEGYSVLLPTR-HLASARELRMLPKVHLEDADVHEFDTLQELC 65
Query: 83 KAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
IK + VINL+G + A+VE+P + + G+++++H+SAL AD
Sbjct: 66 SRIKPNGAVINLVGVLHDKPAQPYGKVFQAAHVELPKNIITAMQLHGLKRYLHMSALGAD 125
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
N P+ Y R+K GE V + TIFRPS ++G+ D+F+ + + + +F
Sbjct: 126 SNGPSMY-------QRSKGDGEAAVKASNLDWTIFRPSVIFGAQDQFINLFAKLTK-LFP 177
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ + G + QPV V DVA+A + K P + Y VGP Y + E++++
Sbjct: 178 AMPLANSGAQF--QPVSVDDVASAFAKSLKMPSTIHQSYDLVGPTVYTMKEIVEF 230
>gi|260567715|ref|ZP_05838184.1| NADH-ubiquinone oxidoreductase [Brucella suis bv. 4 str. 40]
gi|260154380|gb|EEW89461.1| NADH-ubiquinone oxidoreductase [Brucella suis bv. 4 str. 40]
Length = 333
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEIAYY----MAPLGNVGQIQMVQANVR 74
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + + +K S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 75 HRGSVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEGI-RMTHLSSLA 133
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P+ Y RTK +GE V P+ + RPS ++G D+F + +M
Sbjct: 134 ADVNSPSAY-------ARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANM--AC 184
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+ A G IY+ GP
Sbjct: 185 FSPFLPVIGGGETKLQPVYVGDVAEAVARAVDGKLMPGGIYELGGP 230
>gi|288956944|ref|YP_003447285.1| NADH dehydrogenase [Azospirillum sp. B510]
gi|288909252|dbj|BAI70741.1| NADH dehydrogenase [Azospirillum sp. B510]
Length = 323
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 131/249 (52%), Gaps = 10/249 (4%)
Query: 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH 74
S+ V TVFG SG++G +L +L K G+ I I R N L+ G +GQ++
Sbjct: 2 SYRTQVITVFGGSGFIGRHLIRRLAKSGAVIRIATR-NPGKAAFLKTAGAVGQIVPFATD 60
Query: 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
D+ + +A++ ++V INL+G F + + +V+ AR+ARL+ GVE+ +H+SA
Sbjct: 61 CAKDESVARALQGADVAINLLGVLFERGSQSFQGVHVDAAARIARLAASAGVERLVHLSA 120
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ S S + R+K GE VL FP ATI RPS ++G D F + M +
Sbjct: 121 I-------GADASSASAYARSKAAGETAVLSAFPAATILRPSIVFGPEDNFFNKFAAMAQ 173
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ G +T+ QPVYVGD+A A+VAA + GK Y+ GP+ Y ELLD
Sbjct: 174 KAPALPLI--GGGKTLFQPVYVGDLADAVVAALATDASRGKTYELGGPRVYTFRELLDLT 231
Query: 255 HVVMKKGEP 263
+++ P
Sbjct: 232 QKDIQRHRP 240
>gi|161621089|ref|YP_001594975.1| NADH-ubiquinone oxidoreductase [Brucella canis ATCC 23365]
gi|376277450|ref|YP_005153511.1| NADH-ubiquinone oxidoreductase [Brucella canis HSK A52141]
gi|161337900|gb|ABX64204.1| NADH-ubiquinone oxidoreductase [Brucella canis ATCC 23365]
gi|363405824|gb|AEW16118.1| NADH-ubiquinone oxidoreductase [Brucella canis HSK A52141]
Length = 328
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 17/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G + L K+G ++ + R +Y + G++GQ+ + R
Sbjct: 14 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEIAYY----MAPLGNVGQIQMVQANVR 69
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + + +K S+ V+NL+G + V +A +K G+ + H+S+L
Sbjct: 70 HRGSVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEGI-RMTHLSSLA 128
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P+ Y RTK +GE V P+ + RPS ++G D+F + +M
Sbjct: 129 ADVNSPSAY-------ARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANM--AC 179
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
F G ET QPVYVGDVA A+ A G IY+ GP
Sbjct: 180 FSPFLPVIGGGETKLQPVYVGDVAEAVARAVDGKLMPGGIYELGGP 225
>gi|372278075|ref|ZP_09514111.1| NADH dehydrogenase [Oceanicola sp. S124]
Length = 329
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 14/176 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G Y+ ++ +QG ++ + R + +R G +GQV + R+D
Sbjct: 6 LVTIFGGSGFVGRYIARRMAQQGWRVRVAVR-RPDEAGFVRTYGVVGQVEPVFCNIRDDS 64
Query: 80 EIRKAIKYSNVVINLIGREFATK---NFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+R ++VV+N +G FA K NFT A E R+AR++ E GV +H+SA+
Sbjct: 65 SVRAVTHGADVVVNCVG-TFAAKGKNNFTAVQA--EGAGRIARIAAEEGVSGLVHLSAIG 121
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
AD + Y ++K GE+ VL P A I RPS ++G+ DKF + +M
Sbjct: 122 ADAESDSLY-------AQSKAAGEEAVLAAMPGAVILRPSVIFGTEDKFFNRFANM 170
>gi|341614076|ref|ZP_08700945.1| NADH ubiquinone oxidoreductase, putative [Citromicrobium sp.
JLT1363]
Length = 320
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 120/232 (51%), Gaps = 16/232 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
V T+FG SG++G ++ L +Q +++ I R D L+ LGQ+ F + ++
Sbjct: 11 VVTIFGGSGFVGRHVAEDLLQQNARVRIAAR-TPEDAFSLKPLAKLGQLQFARCNILDEH 69
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ ++ S+ V+NL+G T + E LAR +K+ G + F+ ISA+ AD
Sbjct: 70 SVCACVEGSHAVVNLVG----TFEGDLMKLMGEAAGTLARAAKDAGAKSFVQISAIGAD- 124
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
I G S++ R K GE+ V FPEATI RPS ++G L + + F
Sbjct: 125 ------IDGPSEYARAKALGEELVRDAFPEATILRPSIIFGPDGGILTMFADLI-STFPV 177
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSEL 250
L V+ ++ Q V+V DVAAA+ A+ DP A AG+ Y+ GP R+ + EL
Sbjct: 178 LPVF--APDSPLQVVHVDDVAAAVAASLADPSAHAGETYELAGPDRWTMMEL 227
>gi|254466954|ref|ZP_05080365.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodobacterales
bacterium Y4I]
gi|206687862|gb|EDZ48344.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodobacterales
bacterium Y4I]
Length = 330
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 117/241 (48%), Gaps = 12/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K+G ++ + R + ++ G GQV + R+D
Sbjct: 5 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMHVKPYGVPGQVEPVFCNVRDDM 63
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ ++ ++ V+N +G T + E R+AR++ + GV +HISA+ AD
Sbjct: 64 SVAAVMRGADAVVNCVGVLNELGKNTFGAVHAEGAGRIARIAAQEGVASLVHISAIGADT 123
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S + RTK GE VL FP A I RPS ++G+ D+F + M R
Sbjct: 124 D-------ANSAYSRTKAAGETAVLEHFPGAVILRPSVIFGAEDEFFNRFAGMTR--LSP 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
+ G +T QPVYV DVA A V A IY+ GP+ EL++ V+
Sbjct: 175 VLPIASG-DTRFQPVYVDDVAKAAVMGATGAAAG-GIYELGGPEVKSFRELMEQMLAVIH 232
Query: 260 K 260
+
Sbjct: 233 R 233
>gi|88607789|ref|YP_505813.1| NADH-ubiquinone oxidoreductase family protein [Anaplasma
phagocytophilum HZ]
gi|88598852|gb|ABD44322.1| NADH-ubiquinone oxidoreductase family protein [Anaplasma
phagocytophilum HZ]
Length = 313
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 121/241 (50%), Gaps = 12/241 (4%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
VFG SG++G YL +L + + + Y N L+L G LGQV + I+
Sbjct: 6 VFGGSGFIGRYLVCELVARKYSVTV-YTRNHEKAARLKLFGRLGQVDIVCGKLSDAALIQ 64
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
K I +V++NL+G + + +V P+ +A+L+ + G + F+H SA+ AD
Sbjct: 65 KLIADCDVIVNLVGTISDPRGAVLQYLHVTFPSNIAKLATKHG-KMFVHFSAMGAD---- 119
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
I+ S + ++K +GEK + +A I RP+ ++G GD F + ++ R V + +
Sbjct: 120 ---IAKTSSYAQSKLEGEKRIRDVCEDAVILRPNLVFGDGDNFFNKFANLAR-VAPFMPL 175
Query: 203 YKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGE 262
+ G+ + QPV+V DV + + ++G Y+ GP Y L +L+ + V + +
Sbjct: 176 FGGGKNLL-QPVHVDDVVNVAMDLIVNQASSGT-YEVAGPTVYSLKDLIKFVLVATGRKK 233
Query: 263 P 263
P
Sbjct: 234 P 234
>gi|381167912|ref|ZP_09877117.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Phaeospirillum
molischianum DSM 120]
gi|380682988|emb|CCG41929.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Phaeospirillum
molischianum DSM 120]
Length = 331
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 27/251 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G + ++L +G + + R + L G++GQ+ +
Sbjct: 5 LVTVFGGSGFLGRAIVHRLAGRGWAVRVAVR-HPSSAEFLLPMGEVGQISLVRADIGDVA 63
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ A+ ++ VINL+G + T + + A +A +++ G++ F+ +SAL A
Sbjct: 64 AVTAAVAGADAVINLVGILTESSRRTFQAVHADGAANIAGAARDAGIKAFVQMSALGASA 123
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM------- 192
Y R+K GE V P ATI RPS ++G D F +G M
Sbjct: 124 RSDAAY-------ARSKAAGEAAVRDAIPGATILRPSVVFGPDDDFFNRFGKMAVLSPVL 176
Query: 193 -----------WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
W L ++ G QPVYVGDVA+A+ A DP AG+ Y+ G
Sbjct: 177 PVFTGDGYRVVWNGARPSLDLFGTGGPRF-QPVYVGDVASAVAAVLDDPALAGRTYELGG 235
Query: 242 PKRYLLSELLD 252
P Y + ++++
Sbjct: 236 PAVYSMKQIME 246
>gi|292490382|ref|YP_003525821.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4]
gi|291578977|gb|ADE13434.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4]
Length = 327
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 17/248 (6%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
N + G +G++G +L L G ++ + R + RDL + L Q+ H
Sbjct: 1 MNEQTVCILGGTGFVGRWLAAHLVDHGYRVRVLTR-HRQRHRDLLVLPGL-QLKEADIH- 57
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
+ ++ + + VINL+G E + ++P ++A+ + G+++ +H+S
Sbjct: 58 -DPAQLTAQLSGCHSVINLVGILNEKGRDGSGFRRVHADLPEKVAQACLDTGIQRLLHMS 116
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVL---REFPEATIFRPSDMYGSGDKFLRYYG 190
ALNAD N G S + R+K +GE VL + + TIFRPS ++G GD F +G
Sbjct: 117 ALNADAN------QGASHYLRSKGEGESRVLALAEQGLQVTIFRPSVIFGPGDSFFNRFG 170
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ + + PVYV DV A V D D+ G+ Y+ GPK Y L +L
Sbjct: 171 TLLK--LSPFVFPLACPDARLTPVYVEDVVQAFVRTLPDKDSFGQSYELCGPKIYTLQQL 228
Query: 251 LDWFHVVM 258
+++ V+
Sbjct: 229 VEYTAKVL 236
>gi|222084594|ref|YP_002543123.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Agrobacterium radiobacter K84]
gi|398382153|ref|ZP_10540251.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
AP16]
gi|221722042|gb|ACM25198.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Agrobacterium radiobacter K84]
gi|397718021|gb|EJK78616.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
AP16]
Length = 326
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 119/247 (48%), Gaps = 17/247 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-LRLCGDLGQVLFQPYHPRND 78
+ TVFG SG++G ++ L K+G +I + R D+ L+ G+LGQ+ + R
Sbjct: 9 LVTVFGGSGFIGRHVVRALAKRGYRIRVAVRRP--DLAGYLQPQGNLGQISIVQANLRYR 66
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISALNA 137
+ I +A++ + V+N +G A DA E A+ +A ++ +G H+SAL A
Sbjct: 67 NSIDRAVEGAQHVVNCVG-ILAESGRNTFDAVQEFGAKAIAEAARGVGAS-LTHVSALGA 124
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV- 196
+ N P+ Y RTK + E + P+A I RPS ++G D F + M R
Sbjct: 125 NANSPSAY-------ARTKGRAEAAIFSIKPDAVILRPSIVFGPEDGFFNKFADMSRSAP 177
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
F L G +T QPVYV DVA A+ AG IY+ GP+ E L+
Sbjct: 178 FLPLI---GGGKTKFQPVYVEDVAEAVARGVDGKLKAGTIYELGGPEVLSFRECLETTLA 234
Query: 257 VMKKGEP 263
V+ + +P
Sbjct: 235 VINRKKP 241
>gi|149912980|ref|ZP_01901514.1| NADH ubiquinone oxidoreductase, putative [Roseobacter sp. AzwK-3b]
gi|149813386|gb|EDM73212.1| NADH ubiquinone oxidoreductase, putative [Roseobacter sp. AzwK-3b]
Length = 327
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 122/237 (51%), Gaps = 18/237 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ +L K G ++ + R + ++ G +GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRLAKAGWRVRVAVR-RPNEAMHVKPYGVVGQVEPVFCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADA-NVEIPARLARLSKEMGVEKFIHISALNAD 138
+R + ++ V+N +G F K DA + AR+AR++ + GV + +HISA+ AD
Sbjct: 63 SVRAVMNGADAVVNCVG-TFDRKGRNNFDAVQHQGAARIARIAADEGVARMVHISAIGAD 121
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P + Y +TK +GE+ +L+ P+A I RPS ++G D F + M R
Sbjct: 122 PESASVY-------AQTKAKGERAILQAMPDAVILRPSVIFGPEDAFFNRFAGMTRF--- 171
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELL 251
+ G ET QPVYV DVA A A + + G IY+ GP R L+ E+L
Sbjct: 172 SPVLPVVGAETRFQPVYVDDVAHAAAMAVEGKASPG-IYELGGPDVSTFRALMEEML 227
>gi|406706729|ref|YP_006757082.1| NmrA family protein [alpha proteobacterium HIMB5]
gi|406652505|gb|AFS47905.1| NmrA family protein [alpha proteobacterium HIMB5]
Length = 319
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 20/243 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYR-----GNFYDVRDLRLCGDLGQVLFQPYHPRN 77
+FG +G +GS L KL K ++ + R GNF + + G + +P +
Sbjct: 8 IFGGTGQIGSNLLRKLAKNNFKVTVVTRNLHQKGNFIKTQ-----ANAGYIEIIETNPFD 62
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
++ IR K +++ INL+G F + + P+ LA L KE +++F+HISAL
Sbjct: 63 ENSIRPLFKKADICINLVGILFEKGKNNFKNIHTSFPSLLASLCKECDLDQFVHISALGI 122
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D S S++ +K +GEK++ FP TI RPS +Y D F + + +
Sbjct: 123 DA-------STDSKYSASKLEGEKKIKELFPSTTILRPSVVYSVDDNFTTTFMTLLSRL- 174
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
+Y G ET P++ D+ I D + ++ + GP+ ++++ +
Sbjct: 175 PVFPLYYNG-ETKFMPIHCSDLTDVIFKVI-DDEIKSELIECGGPEVLSFKDIVETLMQL 232
Query: 258 MKK 260
+KK
Sbjct: 233 IKK 235
>gi|448465391|ref|ZP_21598801.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
gi|445814982|gb|EMA64925.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
Length = 298
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 128/283 (45%), Gaps = 38/283 (13%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND-DEI 81
V G +G++GSYLC L G ++ R GD+ + + D D I
Sbjct: 5 VAGGTGFIGSYLCRALADGGHEVTALSRS----------PGDVPEGVASATGDVTDYDSI 54
Query: 82 RKAIKYSNVVINLIGRE--FATKNFTIADANVEIPA--RLARLSKEMGVEKFIHISALNA 137
A++ + V+NL+ F K I + L R +++ GVE+F+ +SAL A
Sbjct: 55 AGAVEGQDAVVNLVALSPLFEPKGGNIMHDRIHRGGTRNLVRAAEDGGVERFVQLSALGA 114
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D + T YI R K + E V + TIFRPS ++G G +F+ + +
Sbjct: 115 DADGDTAYI-------RAKGEAEAIVRDSGLDWTIFRPSVVFGEGGEFVSFTKRLKGMFA 167
Query: 198 RKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ +Y G +T QP++V D+ +VAA +D + G+ Y+ GP+ L ++ D +
Sbjct: 168 PGVPLYPLPGGGKTRFQPIHVEDLVPMLVAALEDDEHVGETYEVGGPETLTLRQVTDLVY 227
Query: 256 VVMKKGEPDYGYYRYDLRYDPV-MPLK---LFINGLFPGYPMG 294
KG + P+ MPL L + G PG+PMG
Sbjct: 228 EAENKG----------VTIVPLPMPLARIGLGVLGAVPGFPMG 260
>gi|91974655|ref|YP_567314.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodopseudomonas
palustris BisB5]
gi|91681111|gb|ABE37413.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodopseudomonas
palustris BisB5]
Length = 321
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 110/230 (47%), Gaps = 16/230 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ + L ++ +I + R L+ G +GQ+ + R+
Sbjct: 8 LVTVFGGSGFIGRHVVSALARRDYRIRVAVRRPEL-AGHLQPLGRVGQIHAVQANLRHPA 66
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A++ ++V INL+G E + F DA A + + +H+SA+ A
Sbjct: 67 SVAAAMRGAHVAINLVGILAEGGAQKF---DAVQAEGAAAIAKAAAAVGARMVHVSAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D N P Y R+K GE+ VL P+ATI RPS ++G D+F + + R
Sbjct: 124 DANSPAGY-------ARSKAAGEQAVLSAVPQATILRPSVVFGPEDQFTNRFAALARI-- 174
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
V G +T QPVYVGDVA A+ A G Y+ GP++ +
Sbjct: 175 -SPVVPLVGADTKLQPVYVGDVATAVAEAVDGNTRPGATYELGGPEQLTM 223
>gi|119383244|ref|YP_914300.1| NAD-dependent epimerase/dehydratase [Paracoccus denitrificans
PD1222]
gi|119373011|gb|ABL68604.1| NAD-dependent epimerase/dehydratase [Paracoccus denitrificans
PD1222]
Length = 330
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 12/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G + + QG +I + R + +R G GQV P + R+D
Sbjct: 6 LVTIYGGSGFLGRQIARTMAAQGWRIRVAVR-RPNEAGVVRTYGAPGQVEPVPCNVRDDL 64
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ + ++ VIN +G T + E R+AR++ E GV++F+H+SA+ ADP
Sbjct: 65 SVTACMADADAVINCVGIMVREGKNTFDAIHEEAAGRIARIAAETGVKRFVHVSAIGADP 124
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S++ +K +GE VL P+A I RPS ++G D F M R
Sbjct: 125 D-------SASRYAASKGRGEAAVLAHRPDAMILRPSVIFGPDDHFYNRIASMTRL---G 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
++ G T+ QPVYV DVA A + G IY+ GP + E+ V +
Sbjct: 175 PILFVPGANTLMQPVYVEDVARAAAMGAEGTAQPG-IYELGGPDMLTMREVAQQVLVAID 233
Query: 260 K 260
+
Sbjct: 234 R 234
>gi|430762318|ref|YP_007218175.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430011942|gb|AGA34694.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 308
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 17/235 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRND 78
+ TVFG +G++GS + ++ G + I R + VR GD ++ H ++
Sbjct: 5 ITTVFGGTGFLGSRIVREIVASGRPVRIAAR---HPVRPAWAGAGDAIELATANIH--DE 59
Query: 79 DEIRKAIKYSNVVINLIGR-EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ +A+ + +N + A + T +V R+ARL++E GV + +HIS + A
Sbjct: 60 TSVARALDGATAAVNAVSLYAEAGGHDTFEAVHVTGAGRMARLAREAGVRRLVHISGIGA 119
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D P++Y+ R + +GE+ V FP A I RPS ++G D FL + +
Sbjct: 120 DVTSPSFYV-------RARARGEQSVRAAFPNAVIVRPSVLFGPQDAFLANLARLAQ--L 170
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ ++ +G+ + QPV+V DVA A+ D A +++ G + Y E+++
Sbjct: 171 PVIPLFGRGDTRL-QPVFVDDVAQAVARLTAAADPAASLFELGGARVYRYREIVE 224
>gi|126727263|ref|ZP_01743099.1| NADH ubiquinone oxidoreductase, putative [Rhodobacterales bacterium
HTCC2150]
gi|126703472|gb|EBA02569.1| NADH ubiquinone oxidoreductase, putative [Rhodobacterales bacterium
HTCC2150]
Length = 327
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 20/238 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G Y+ ++ KQG ++ + R + ++ G +GQV + R+D
Sbjct: 4 LVTIFGGSGFVGRYVARRMAKQGWRVRVAVRRPDEAIF-VKPYGTVGQVEPVLANIRDDA 62
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A+ ++ V+N +G E F E R+ARL+ + +H+SA+ A
Sbjct: 63 SVAAAMLGADAVVNCVGILGEVGPNKFD--PVQHEGAERIARLAAAAKIPALVHLSAIGA 120
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D + + Y+ RTK GE VL FP A I RPS ++G+ D+F + M R
Sbjct: 121 DEDSDSDYL-------RTKALGEAGVLEHFPCAIILRPSIIFGTEDQFFNRFASMTRM-- 171
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELL 251
+ G T QPVYV DVA A V A G +Y+ GP+ R L+ +L
Sbjct: 172 -SPILPIAGGATKFQPVYVDDVATAAVKGVLG-QAEGGVYELGGPEVADFRSLMQNML 227
>gi|163757551|ref|ZP_02164640.1| putative oxidoreductase protein [Hoeflea phototrophica DFL-43]
gi|162285053|gb|EDQ35335.1| putative oxidoreductase protein [Hoeflea phototrophica DFL-43]
Length = 326
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 111/242 (45%), Gaps = 19/242 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ L ++G I + R L+ G +GQ++ + RN D
Sbjct: 9 LVTVFGGSGFVGRHVVRALARRGYSIRVAVRRPDL-AGHLQPLGGVGQIVAVQANLRNRD 67
Query: 80 EIRKAIKYSNVVINLIGREFAT--KNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ +A++ ++ VIN +G F + F A A ++ G HISA+ A
Sbjct: 68 SVDRAVRGADHVINCVGILFESGRNKFDSVQAFGARAVAEAARAQGAG---LTHISAIGA 124
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DP+ S + RTK E V P+A I RPS ++G D F + M R
Sbjct: 125 DPD-------SDSDYARTKGYAELAVAEVMPDARIMRPSIIFGPEDGFFNKFAGMAR--L 175
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDW 253
G ET QPVYVGDVA A+ + G IY+ GP+ R L E+L+
Sbjct: 176 APALPLVGGGETKFQPVYVGDVAEAVARSVDGTLVPGAIYELGGPRVMTFRQCLEEMLET 235
Query: 254 FH 255
H
Sbjct: 236 IH 237
>gi|448440308|ref|ZP_21588471.1| NAD-dependent epimerase/dehydratase [Halorubrum saccharovorum DSM
1137]
gi|445690204|gb|ELZ42419.1| NAD-dependent epimerase/dehydratase [Halorubrum saccharovorum DSM
1137]
Length = 298
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND-DEI 81
V G +G++GSYLC L G ++ R GD + + D D I
Sbjct: 5 VAGGTGFIGSYLCGALADGGHEVTALSRS----------PGDTPEGVASATGDVTDYDSI 54
Query: 82 RKAIKYSNVVINLIGRE--FATKNFTIADANVEIPA--RLARLSKEMGVEKFIHISALNA 137
A++ + V+NL+ F K + + L R +++ G E+F+ +SAL A
Sbjct: 55 AGAVEGQDAVVNLVALSPLFEPKGGNVMHDRIHRGGTENLVRAAEDGGAERFVQLSALGA 114
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DP+ T YI R K E+ V + TIFRPS ++G G +F+ + +
Sbjct: 115 DPDGDTAYI-------RAKGAAEEIVRESGLDWTIFRPSVVFGEGGEFVSFTKRLKGMFA 167
Query: 198 RKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ +Y G +T QP++V D+ +VAA + + G+ Y+ GP+ L E+ D +
Sbjct: 168 PGIPLYPLPGGGKTRFQPIHVEDLVPMLVAALEGDEHVGETYEVGGPETLTLREVTDLVY 227
Query: 256 VVMKKGEPDYGYYRYDLRYDPV-MPLK---LFINGLFPGYPMG 294
+KG + P+ MPL L + G PG+PMG
Sbjct: 228 EAEEKG----------VTILPLPMPLARIGLSVLGAVPGFPMG 260
>gi|448453500|ref|ZP_21593843.1| NAD-dependent epimerase/dehydratase [Halorubrum litoreum JCM 13561]
gi|445807300|gb|EMA57385.1| NAD-dependent epimerase/dehydratase [Halorubrum litoreum JCM 13561]
Length = 298
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 127/286 (44%), Gaps = 44/286 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++GSYLC L G + R + + G G V + D I
Sbjct: 5 VAGGTGFIGSYLCRALADDGHAVTALSRSP--EEAPEGVTGVTGDV-------TDYDSIA 55
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPAR--------LARLSKEMGVEKFIHISA 134
A+ + V+NL+ A D + R L R +++ GV+ F+ +SA
Sbjct: 56 SAVDGHDAVVNLV----ALSPLFEPDGGNRMHDRIHRGGTENLVRAAEDGGVDGFVQLSA 111
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L ADPN T YI R K + E+ V + TIFRPS ++G G +F+ + +
Sbjct: 112 LGADPNGDTAYI-------RAKGEAEEIVRESGLDWTIFRPSVVFGEGGEFVSFTKRLKG 164
Query: 195 HVFRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ +Y G +T QP++V D+ I AA D + AG+ Y+ GP+ L ++ D
Sbjct: 165 MFAPGVPLYPLPGGGKTRFQPIHVEDLVPMIAAAVTDGEHAGETYEVGGPEVLTLRQVTD 224
Query: 253 WFHVVMKKGEPDYGYYRYDLRYDPV-MPLK---LFINGLFPGYPMG 294
+ KKG + P+ MPL L + G PG+PMG
Sbjct: 225 LVYEAEKKG----------VTIVPLPMPLAKIGLSVLGAVPGFPMG 260
>gi|448427800|ref|ZP_21584075.1| NAD-dependent epimerase/dehydratase [Halorubrum terrestre JCM
10247]
gi|448485530|ref|ZP_21606734.1| NAD-dependent epimerase/dehydratase [Halorubrum arcis JCM 13916]
gi|448513728|ref|ZP_21616695.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
9100]
gi|448519175|ref|ZP_21617951.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
10118]
gi|445677694|gb|ELZ30193.1| NAD-dependent epimerase/dehydratase [Halorubrum terrestre JCM
10247]
gi|445693255|gb|ELZ45414.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
9100]
gi|445704191|gb|ELZ56109.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
10118]
gi|445817500|gb|EMA67371.1| NAD-dependent epimerase/dehydratase [Halorubrum arcis JCM 13916]
Length = 298
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 127/286 (44%), Gaps = 44/286 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++GSYLC L G + R + + G G V + D I
Sbjct: 5 VAGGTGFIGSYLCRALADDGHAVTALSRSP--EEAPEGVTGVTGDV-------TDYDSIA 55
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPAR--------LARLSKEMGVEKFIHISA 134
A+ + V+NL+ A D + R L R +++ GV+ F+ +SA
Sbjct: 56 SAVDGHDAVVNLV----ALSPLFEPDGGNRMHDRIHRGGTENLVRAAEDGGVDGFVQLSA 111
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L ADPN T YI R K + E+ V + TIFRPS ++G G +F+ + +
Sbjct: 112 LGADPNGDTAYI-------RAKGEAEEIVRESGLDWTIFRPSVVFGEGGEFVSFTKRLKG 164
Query: 195 HVFRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ +Y G +T QP++V D+ I AA D + AG+ Y+ GP+ L ++ D
Sbjct: 165 MFAPGVPLYPLPGGGKTRFQPIHVEDLVPMIAAAVTDDEHAGETYEVGGPEVLTLRQVTD 224
Query: 253 WFHVVMKKGEPDYGYYRYDLRYDPV-MPLK---LFINGLFPGYPMG 294
+ KKG + P+ MPL L + G PG+PMG
Sbjct: 225 LVYEAEKKG----------VTIVPLPMPLAKIGLSVLGAVPGFPMG 260
>gi|154250653|ref|YP_001411477.1| NAD-dependent epimerase/dehydratase [Parvibaculum lavamentivorans
DS-1]
gi|154154603|gb|ABS61820.1| NAD-dependent epimerase/dehydratase [Parvibaculum lavamentivorans
DS-1]
Length = 321
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 118/232 (50%), Gaps = 10/232 (4%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G ++ L K+G +I + R + LR G +GQV + R+D +
Sbjct: 8 TVFGGSGFVGRHIVQTLAKRGYRIRVAVR-RPNEALFLRPMGVVGQVEPIQANIRDDASV 66
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
R A+ ++ V+NL+G T T E R+AR + E G + IHISA+ AD
Sbjct: 67 RAAVAGADAVVNLVGILHETGKQTFDAVQAEGAGRVARAAAEAGCGRLIHISAIGADEES 126
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
++Y RTK GEK V P+A I RPS ++G GD F + + R +F L
Sbjct: 127 ASHY-------GRTKALGEKAVRDAMPDAAIVRPSIVFGPGDSFFNRFAALAR-LFPALP 178
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ G + QPVYV DVA +V + +G++Y+ GP+ EL++
Sbjct: 179 LIGGGTMRL-QPVYVKDVAEGVVQILEGEGLSGRVYEFGGPEVLTFRELMEL 229
>gi|304392207|ref|ZP_07374149.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
[Ahrensia sp. R2A130]
gi|303296436|gb|EFL90794.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
[Ahrensia sp. R2A130]
Length = 320
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 130/286 (45%), Gaps = 26/286 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G Y+ +L ++G ++ + R ++ GD+GQ+ F + R
Sbjct: 6 LVTVFGGSGFLGRYVVRELAERGYRVRVACRRPDL-AGHVQPSGDVGQIQFVQANLRYRW 64
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE---KFIHISALN 136
I +A++ +++V+N +G AT T + AR A E K +H+SA+
Sbjct: 65 SIDRAVEGADIVVNTVGILAATGKQTFD----SLQARGAGWVSEAAAAAGAKMVHVSAIG 120
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD Y RTK GE V + P+A I RPS ++G D F + M R +
Sbjct: 121 ADEQSKADY-------ARTKALGEDMVRKASPDAIIMRPSIIFGPEDDFFNRFAGMAR-I 172
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
L + G+ QPVYVGDVA AI A + AG ++ GP+ E ++
Sbjct: 173 APALPLIGGGKSRF-QPVYVGDVAKAIANAADEKLEAGSTWELGGPEVLTFRECMERMLD 231
Query: 257 VMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERVE 302
V+ + + L P P+ + L P +TP +VE
Sbjct: 232 VIDR--------KRALVSLP-FPIASAMGSLLQFAPGAPITPGQVE 268
>gi|350545008|ref|ZP_08914525.1| NAD-dependent epimerase/dehydratase [Candidatus Burkholderia kirkii
UZHbot1]
gi|350527207|emb|CCD38681.1| NAD-dependent epimerase/dehydratase [Candidatus Burkholderia kirkii
UZHbot1]
Length = 318
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 114/234 (48%), Gaps = 19/234 (8%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G SG++GS+L N L G ++ + R L D V+ H + ++
Sbjct: 7 ALIGGSGFIGSHLVNALVDLGKKVRVATRRRVNAAHLTLLPID---VIETDVH--DPVQL 61
Query: 82 RKAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
I S+ V+NL+G R A A+VE+P ++A + GV + +H+SA+ A
Sbjct: 62 AAFIDQSDAVVNLVGVLQGRRGDPYGPDFAKAHVELPRKIAAACEAKGVRRLLHMSAIGA 121
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DP P+ Y+ R+K GEK + + TIFR S ++G D L + + R +F
Sbjct: 122 DPQGPSMYL-------RSKGDGEKVIRESGLDWTIFRSSVVFGPEDNLLNQFAFLER-MF 173
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ + + QPV+VGDVA A+V DA+ +Y+ GP Y L+EL+
Sbjct: 174 PVIPLACADAKF--QPVFVGDVAKAMVNVLDLDDASRHVYELAGPGVYTLAELV 225
>gi|375107792|ref|ZP_09754053.1| nucleoside-diphosphate-sugar epimerase [Burkholderiales bacterium
JOSHI_001]
gi|374668523|gb|EHR73308.1| nucleoside-diphosphate-sugar epimerase [Burkholderiales bacterium
JOSHI_001]
Length = 322
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 46/272 (16%)
Query: 22 TVFGASGYMG-SYLCNKLGKQGS--QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G ++ G+ Q+++P R + LR L V ++D
Sbjct: 6 VVLGGTGFVGRAFAVRAAATVGTALQLVVPTR-RLASGQALR---SLPTVQLLQARVQDD 61
Query: 79 DEIRKAIKYSNVVINLI----GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
++R+ ++ ++ V+NL+ GRE +F +V +P RLA +GV + +H+SA
Sbjct: 62 ADLRRVLQGADAVVNLVAILHGRE---ADFE--QVHVTLPQRLAAACAAVGVRRLVHVSA 116
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP------EATIFRPSDMYGSGDKFLRY 188
L P+ Y+ R+K +GE VL++ E T+ RPS ++G+ D+FL
Sbjct: 117 LGVGLQAPSMYL-------RSKARGEA-VLQQAAAGAGGLELTLLRPSVIFGAEDRFLNL 168
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ + + VF + + G + QPV+VGDVA A++ D GK + GP+ Y L+
Sbjct: 169 FAAL-QAVFPVMPLGGAGAQL--QPVWVGDVAQALLQCLADRATVGKTFDIAGPQVYTLA 225
Query: 249 ELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPL 280
+L +K G +R PV+PL
Sbjct: 226 QL-------VKLAGARTGRHR------PVLPL 244
>gi|337264839|ref|YP_004608894.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum
WSM2075]
gi|336025149|gb|AEH84800.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum
WSM2075]
Length = 325
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 119/240 (49%), Gaps = 21/240 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ VFG SG++G ++ L K+G +I + R L+ G++GQ+ + R
Sbjct: 10 LVVVFGGSGFVGRHVVRALAKRGYRIRVACRRPDL-AGHLQPLGNVGQIQPVQANVRVRW 68
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISALN 136
+ +A++ ++ VINL+ E + F+ A E AR +A ++ +G HISAL
Sbjct: 69 SVDRAVQGADHVINLVAVLHESGRQKFS---AVHEFGARAVAEAARSVGA-GLTHISALG 124
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD + GS + RTK GE+ VL +A IFRPS +G D F + +M R
Sbjct: 125 AD-------LGSGSDYARTKALGEQAVLETIKDAVIFRPSINFGPEDSFFNRFANMAR-- 175
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD 252
+ + G QPVYVGDVA A+ + + G+IY+ GPK R + ELL+
Sbjct: 176 YSPVLPLIGGGHNKLQPVYVGDVAEAVARSVEGKVDGGQIYELGGPKVLTFRECMEELLE 235
>gi|398832812|ref|ZP_10590962.1| putative nucleoside-diphosphate sugar epimerase [Herbaspirillum sp.
YR522]
gi|398222591|gb|EJN08961.1| putative nucleoside-diphosphate sugar epimerase [Herbaspirillum sp.
YR522]
Length = 322
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 27/240 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++G+ L LG ++++P R + + V +D +
Sbjct: 8 VLGGTGFVGTRLVRLLGSSTDYRVMVPTR----RIERAKHLLVSPVVSVVQADIHDDGVL 63
Query: 82 RKAIKYSNVVINLIG-------REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
+ + ++VVINL+G R+ +V +P R+ GV +++H+SA
Sbjct: 64 SQLVSQADVVINLVGILHSRPARKGQAYGPDFEAQHVALPRRIVAACLRHGVARYLHMSA 123
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLRE--FPEATIFRPSDMYGSGDKFLRYYGHM 192
L ADP+ P+ Y R+K GE EV + P A IFRPS ++G GD+F+ + +
Sbjct: 124 LGADPHGPSMY-------QRSKAAGEAEVTAQPGLP-AVIFRPSVIFGEGDRFINLFAGL 175
Query: 193 WRHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ + V G + QPVYVGDVA A A P AG+ ++ GP+ Y L EL+
Sbjct: 176 QK----RFPVLPLGSAEARFQPVYVGDVAHAFKQAIDQPKLAGQCFELGGPRVYSLRELV 231
>gi|418401515|ref|ZP_12975042.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti
CCNWSX0020]
gi|359504474|gb|EHK77009.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti
CCNWSX0020]
Length = 326
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 11/233 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G ++ L K+G +I + R L+ G++GQ+ F + R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVRRPDL-AGHLQPLGNVGQISFSQANLRYRR 67
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +A+ ++ VIN +G F + T +A + AR + HISA+ AD
Sbjct: 68 SVDRAVDGADHVINCVGVLFESGRNTF-EAVQDFGARAVAEAARATGATLTHISAIGADA 126
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N + Y RTK + E +L P A I RPS ++G D F + M R F
Sbjct: 127 NSESSY-------ARTKGRAEAAILETLPAAVILRPSIIFGPEDGFFNKFAEMAR--FSP 177
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G T QPVYV DVA A+ + G IY+ GP+ E LD
Sbjct: 178 VLPLIGGGNTRFQPVYVTDVAEAVARSVDGKLTGGTIYELGGPQVLSFRECLD 230
>gi|190889980|ref|YP_001976522.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli CIAT 652]
gi|190695259|gb|ACE89344.1| probable NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli CIAT 652]
Length = 326
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 114/247 (46%), Gaps = 23/247 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ T+FG SG++G ++ L K+G +I + R F L+ G++GQ+ +
Sbjct: 9 LVTLFGGSGFVGRHVVRALAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISLVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
R + I +A+ ++ V+N +G +E F DA E AR + HIS
Sbjct: 64 RYRNSIDRAVDGASHVVNCVGILQETGRNTF---DAVQEFGARAVAEAARNAGATLAHIS 120
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ A+ N S + RTK + E +L P+A IFRPS ++G D F + M
Sbjct: 121 AIGANAN-------SDSDYGRTKGRAEAAILSIKPDAVIFRPSIVFGPEDSFFNKFADMA 173
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
R + G +T QPVYV DVA A+ A AGK+Y+ GP+ E L+
Sbjct: 174 R--MSPVLPLVGGGKTKFQPVYVEDVAEAVARAVDGKVPAGKVYELGGPEVLSFRECLET 231
Query: 254 FHVVMKK 260
V +
Sbjct: 232 MLKVTSR 238
>gi|421747537|ref|ZP_16185236.1| putative NAD-dependent epimerase/dehydratase [Cupriavidus necator
HPC(L)]
gi|409773834|gb|EKN55556.1| putative NAD-dependent epimerase/dehydratase [Cupriavidus necator
HPC(L)]
Length = 340
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 112/253 (44%), Gaps = 32/253 (12%)
Query: 23 VFGASGYMGSYLCNKLGK---------QGSQIIIP---------YRGNFYDVRDLRLCGD 64
V G SG++GS+L +L + + ++IP N + RDL
Sbjct: 8 VIGGSGFIGSHLVARLSGVANRSNAPLEHATVVIPPMDPERIVVATRNEDNARDLLALPR 67
Query: 65 LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKN----FTIADANVEIPARLARL 120
+ + D ++ +V+NL+G + A A+VE+P RL
Sbjct: 68 VEIAVLDVADEAALDSAIGSLGIEGIVVNLVGVLHGGRGDPYGAGFAAAHVELPRRLIES 127
Query: 121 SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYG 180
+ GV + +H+SAL AD P+ Y+ R+K GE+ V + TIFRPS ++G
Sbjct: 128 MRRTGVRRLLHMSALGADSAGPSMYL-------RSKGDGERAVRESGLDWTIFRPSVVFG 180
Query: 181 SGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAV 240
D FL + M R V + QPV+V DVA A+V A P G+ Y+
Sbjct: 181 PDDHFLNLFASMQR---LAPVVPLACAQARFQPVFVQDVAQAMVNAMATPATIGRCYELG 237
Query: 241 GPKRYLLSELLDW 253
GP+ Y L EL+ +
Sbjct: 238 GPQVYTLEELVRF 250
>gi|90421961|ref|YP_530331.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisB18]
gi|90103975|gb|ABD86012.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisB18]
Length = 349
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 15/243 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ L K+ +I + R L+ G +GQ+ + R D
Sbjct: 30 LVTVFGGSGFIGRHVVGALAKRDFRIRVAVRRPDL-TGHLQPLGKVGQIHAVQANLRYPD 88
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
++ A++ + +V+NL+G E + F A A + + +H+SA+ A
Sbjct: 89 SVQAAVRDAGIVVNLVGILAEGGAQKF---QAVQAQGAGAIAQAAAAVGARMVHVSAIGA 145
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D + Y R+K GE+ VL P+A IFRPS ++G D+F + + R
Sbjct: 146 DAQSASLY-------ARSKAAGEQAVLAAVPQAVIFRPSVVFGPEDQFTNRFAGLAR--M 196
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
+ G T QPVYVGDVA A+ A G Y+ GP+ + ++++ V
Sbjct: 197 SAVVPLIGGGATKLQPVYVGDVATAVAQAVDGKAKPGATYELGGPEVLTMRQVIEIILDV 256
Query: 258 MKK 260
+++
Sbjct: 257 IQR 259
>gi|17544806|ref|NP_518208.1| NADH-ubiquinone oxidoreductase [Ralstonia solanacearum GMI1000]
gi|17427095|emb|CAD13615.1| putative nadh-ubiquinone oxidoreductase oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 334
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 29/247 (11%)
Query: 23 VFGASGYMGSYLCNKL--------GKQGSQIIIPYR-GNFYDVRDLRLCGDLGQVLFQPY 73
V G +G++G+ L ++L G ++I+P R +L L + + +
Sbjct: 8 VLGGTGFIGTQLLSRLVTETFAAPGLPDGRVIVPTRDAESARAHNLTLLPRVDVMEADVH 67
Query: 74 HPRNDDEIRKAIKYSN----VVINLIGR----EFATKNFTIADANVEIPARLARLSKEMG 125
D + A+ VINL+G A A+V++P R+ + G
Sbjct: 68 ADDALDALFLALTEGGGEHCAVINLVGVLQDVRAAPYGPAFRRAHVDLPRRVVDACRRHG 127
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++ +H+SAL ADP +G S + R+K GE+ V + T+FRPS ++G GD F
Sbjct: 128 VKRLLHMSALGADP-------AGPSMYQRSKGDGERIVTGSDLDWTVFRPSVVFGPGDHF 180
Query: 186 LRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L + + R F LA E QPVYV DVAAA A +P G +Y VGP+
Sbjct: 181 LNLFARLQRLAPFVPLA----RAEARFQPVYVDDVAAAFAHALDNPATFGHVYPLVGPRV 236
Query: 245 YLLSELL 251
Y L+EL+
Sbjct: 237 YTLAELV 243
>gi|448493942|ref|ZP_21609238.1| NAD-dependent epimerase/dehydratase [Halorubrum californiensis DSM
19288]
gi|445689680|gb|ELZ41907.1| NAD-dependent epimerase/dehydratase [Halorubrum californiensis DSM
19288]
Length = 298
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 127/287 (44%), Gaps = 46/287 (16%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEI 81
V G +G++GSYLC L G + R + + GD+ + D I
Sbjct: 5 VAGGTGFIGSYLCRALADDGHAVTALSRSPEEAPEGVTGVSGDV----------TDYDSI 54
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPAR--------LARLSKEMGVEKFIHIS 133
A+ + V+NL+ A D + R L R +++ GV+ F+ +S
Sbjct: 55 ASAVDGHDAVVNLV----ALSPLFEPDGGNRMHDRIHRGGTENLVRAAEDGGVDGFVQLS 110
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
AL ADPN T YI R+K + E V + TIFRPS ++G G +F+ + +
Sbjct: 111 ALGADPNGDTAYI-------RSKGEAEGIVRESELDWTIFRPSVVFGDGGEFVSFTKRLK 163
Query: 194 RHVFRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ +Y G +T QP++V D+ I AA D + AG+ Y+ GP+ L ++
Sbjct: 164 GMFAPGVPLYPLPGGGKTRFQPIHVEDLVPMIAAAVTDDEHAGETYEVGGPEVLTLRQVT 223
Query: 252 DWFHVVMKKGEPDYGYYRYDLRYDPV-MPLK---LFINGLFPGYPMG 294
D + KKG + P+ MPL L + G PG+PMG
Sbjct: 224 DLVYEAEKKG----------VTIVPLPMPLAKIGLSVLGAVPGFPMG 260
>gi|440225261|ref|YP_007332352.1| NADH dehydrogenase [Rhizobium tropici CIAT 899]
gi|440036772|gb|AGB69806.1| NADH dehydrogenase [Rhizobium tropici CIAT 899]
Length = 326
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 117/247 (47%), Gaps = 23/247 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G+LGQ+ +
Sbjct: 9 LVTVFGGSGFIGRHVVRALAKRGYRIRVAVRRPDLAGF-----LQPLGNLGQISIVQANV 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISA 134
R + I +A++ + V+N +G A DA E A+ +A ++ G HIS+
Sbjct: 64 RYRNSIDRAVEGAQHVVNCVG-ILAESGRNTFDAVQEFGAKAIAEAARGAGAS-LTHISS 121
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L+AD N P+ Y RTK + E +L P+A I RPS ++G D+F + M R
Sbjct: 122 LSADANSPSAY-------ARTKARAEAAILSIKPDAIILRPSIVFGPEDEFFNKFADMSR 174
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
F L G +T QPVYV D+A + + AG Y+ GP+ E L+
Sbjct: 175 TAPFLPLI---GGGKTKFQPVYVQDIAETVARSVDGKLKAGTTYELGGPEVLSFRECLET 231
Query: 254 FHVVMKK 260
V+ +
Sbjct: 232 TLAVINR 238
>gi|13474330|ref|NP_105898.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [Mesorhizobium
loti MAFF303099]
gi|14025082|dbj|BAB51684.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [Mesorhizobium
loti MAFF303099]
Length = 341
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 119/244 (48%), Gaps = 17/244 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ VFG SG++G ++ L K+G +I + R L+ G++GQ+ + R
Sbjct: 26 LVVVFGGSGFVGRHVVRALAKRGYRIRVACRRPDL-AGHLQPLGNVGQIQPVQANVRVRW 84
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISALN 136
+ +A++ ++ V+NL+ E + F+ A E +R +A ++ +G HISAL
Sbjct: 85 SVDRAVQGADHVVNLVAILHETGRQKFS---AVHEFGSRAVAEAARSVGA-GLTHISALG 140
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD + S + RTK GEK VL P+A IFRPS +G D F + M R
Sbjct: 141 AD-------LDSESDYARTKALGEKAVLETIPDAVIFRPSINFGPEDSFFNRFASMAR-- 191
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
+ + G +T QPVYVGDVA A+ + G+IY+ GP E ++
Sbjct: 192 YSPVLPLIGGGQTKFQPVYVGDVAEAVARSVDGKIDRGQIYELGGPNVLTFKECMEELLT 251
Query: 257 VMKK 260
V+++
Sbjct: 252 VIER 255
>gi|409435718|ref|ZP_11262926.1| NAD-dependent epimerase/dehydratase [Rhizobium mesoamericanum
STM3625]
gi|408752476|emb|CCM74073.1| NAD-dependent epimerase/dehydratase [Rhizobium mesoamericanum
STM3625]
Length = 326
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 119/240 (49%), Gaps = 25/240 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFIGRHIVRALAKRGYRIRVAVRRPDLAGF-----LQPIGNVGQISFVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHI 132
R + + +A++ ++ V+N +G E +F +A E AR +A ++ +G K IHI
Sbjct: 64 RYRNSVDRAVEGADFVVNCVGILHEAGRNSF---EAVQEFGARAVAEAARSVGA-KLIHI 119
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
SA+ A + + Y RTK + E + P+A IFRPS ++G D F + M
Sbjct: 120 SAIGAHAHSDSGY-------ARTKGRAEAAIHAIKPDAIIFRPSVVFGPEDSFFNKFADM 172
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
R G +T QPVYV DVA A+ A + AG++Y+ GP+ E L+
Sbjct: 173 AR--VSPFLPLIGGGKTKFQPVYVVDVAQAVARAVEGKVTAGEVYELGGPEVLTFRECLE 230
>gi|365899768|ref|ZP_09437655.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365419500|emb|CCE10197.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 322
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 103/236 (43%), Gaps = 15/236 (6%)
Query: 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
+ TVFG SG++G ++ L K+ +I + R L+ G +GQ+ + R
Sbjct: 7 TLVTVFGGSGFLGRHVVRALAKRDYRIRVAVRRPEL-AGHLQPLGRVGQIHAVQANLRYP 65
Query: 79 DEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ AI+ S+ +INL+G E + F + + +H+SA+
Sbjct: 66 ASVEAAIRDSHAIINLVGILTESGAQTFNAVQGEGAA---TVAKAAAGAGAQLVHVSAIG 122
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD P+ Y R K GEK VL P ATI RPS ++G D F + + R
Sbjct: 123 ADEESPSAY-------ARAKAAGEKAVLTALPTATIMRPSVVFGPEDDFTNRFAGLAR-- 173
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
G T QPVYVGDVA AI A AG Y+ GP+ E+++
Sbjct: 174 ISPFLPLIGGGATRMQPVYVGDVATAIADAVDGKARAGATYELGGPEVLSFREIIE 229
>gi|110635928|ref|YP_676136.1| NAD-dependent epimerase/dehydratase [Chelativorans sp. BNC1]
gi|110286912|gb|ABG64971.1| NAD-dependent epimerase/dehydratase [Chelativorans sp. BNC1]
Length = 323
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 17/244 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ L ++G ++ + R N + + G +GQV + R
Sbjct: 10 LVTVFGGSGFVGRHVVLALTRRGYRVRVACR-NPHTAIFVNTLGTMGQVHAVQANIRYRW 68
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISALN 136
+ +A+ ++ VINL+G +E + F DA I AR +A ++ +G F SA+
Sbjct: 69 SVDRAVHGADHVINLVGILQESGRQRF---DAVQAIGARTVAEAARSVGA-GFTQASAIG 124
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD N P+ Y RTK +GE+ VL A I RPS ++G+ DKF + +M R
Sbjct: 125 ADLNSPSAY-------GRTKAEGEQAVLETVKNAVIIRPSIIFGTEDKFFNRFANMAR-- 175
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
F + G +T QPVYVGDVA + G Y+ GP+ E ++
Sbjct: 176 FSPVLPLIGGGQTRFQPVYVGDVAEVYARSVDGVLKPGATYELGGPQVLTFRECMEEILE 235
Query: 257 VMKK 260
V+++
Sbjct: 236 VIER 239
>gi|452963630|gb|EME68692.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Magnetospirillum sp.
SO-1]
Length = 335
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 118/256 (46%), Gaps = 35/256 (13%)
Query: 20 VATVFGASGYMGSYLCNKLGKQG----SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
V TVFG SG++G + +L QG + + P F L+ GD+GQV
Sbjct: 5 VVTVFGGSGFIGRNVVKRLAAQGWVVRAAVRDPIAAEF-----LKPMGDVGQVTPLRADI 59
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ + A+ + V+NL+G + + T +V+ A +A +K GV + +H+SAL
Sbjct: 60 TDPKAVAMAVAGVDAVVNLVGILYESGRATFDAIHVKGAATVAAAAKAAGVGRLVHMSAL 119
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD N Y R+K GE+ VL FP A + RPS ++G D F +G +
Sbjct: 120 GADKNSEAAY-------ARSKAAGEEAVLAAFPGACVVRPSVVFGPDDDFFNRFGKLA-M 171
Query: 196 VFRKLAVYKK-------GEE-----------TIKQPVYVGDVAAAIVAACKDPDAAGKIY 237
V L V+ GE I QPV V DVA AIV D AGK +
Sbjct: 172 VSPVLPVFTADGFKPVCGEAGCSIDLFGSGGPIFQPVSVADVAQAIVQMLDDSRHAGKTF 231
Query: 238 QAVGPKRYLLSELLDW 253
+ GP+RY + E+++
Sbjct: 232 ELGGPRRYSMKEVMEL 247
>gi|421865602|ref|ZP_16297278.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia H111]
gi|358074486|emb|CCE48156.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia H111]
Length = 319
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 113/240 (47%), Gaps = 25/240 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++GS L N L G Q+ I R + R L++ V + +
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKQVRIGTRRREH-ARHLQML----PVDIVELDALDTRTLA 62
Query: 83 KAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + ++ INLIG + A A+V +PA LA E+GV + +H+SAL AD
Sbjct: 63 RFVAGAHAAINLIGVLHGGRGTPYGPGFARAHVALPAALATACTEVGVRRLLHMSALGAD 122
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEV----LREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
P+ G S + R+K GE + + TIFRPS ++G GD FL + ++ R
Sbjct: 123 PH-------GASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDAFLNTFANLQR 175
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
V LA+ + QPV+VGDV A V A GK Y+ GP Y L +L+ +
Sbjct: 176 TVPVLPLAM----PDARFQPVFVGDVVRAFVNTLDLAGAHGKTYELGGPTVYTLEQLVRY 231
>gi|206558957|ref|YP_002229717.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia J2315]
gi|444357653|ref|ZP_21159177.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia BC7]
gi|444372647|ref|ZP_21172084.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia K56-2Valvano]
gi|198034994|emb|CAR50866.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia J2315]
gi|443593156|gb|ELT61913.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia K56-2Valvano]
gi|443606003|gb|ELT73811.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia BC7]
Length = 319
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 113/240 (47%), Gaps = 25/240 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++GS L N L G Q+ I R + R L++ V + +
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKQVRIGTRRREH-ARHLQML----PVDIVELDALDTRTLA 62
Query: 83 KAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + ++ INLIG + A A+V +PA LA E+GV + +H+SAL AD
Sbjct: 63 RFVAGAHAAINLIGVLHGGRGTPYGPGFARAHVALPAALATACTEVGVRRLLHMSALGAD 122
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEV----LREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
P+ G S + R+K GE + + TIFRPS ++G GD FL + ++ R
Sbjct: 123 PH-------GASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDAFLNTFANLQR 175
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
V LA+ + QPV+VGDV A V A GK Y+ GP Y L +L+ +
Sbjct: 176 TVPVLPLAM----PDARFQPVFVGDVVRAFVNTLDLAGAHGKTYELGGPTVYTLEQLVRY 231
>gi|85714023|ref|ZP_01045012.1| NAD-dependent epimerase/dehydratase [Nitrobacter sp. Nb-311A]
gi|85699149|gb|EAQ37017.1| NAD-dependent epimerase/dehydratase [Nitrobacter sp. Nb-311A]
Length = 322
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 11/247 (4%)
Query: 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY 73
+S + + TVFG SG++G ++ L K+ +I + R L+ G +GQ+
Sbjct: 2 ASNSDTLVTVFGGSGFLGRHVVRALAKRDYRIRVGVRRPEL-AGHLQPLGKVGQIHAVQV 60
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
+ R+ +R A++ S+V +NL+G + T DA V A + + +H+S
Sbjct: 61 NLRHPASVRAAMRGSHVAVNLVGILTKSGRQTF-DAVVAKGAATVAETAAAAGARLVHVS 119
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ ADP + S + R K GEK VL P ATI RPS M+G D+F + +
Sbjct: 120 AIGADP-------TSASAYARAKASGEKAVLAAVPSATILRPSVMFGPEDQFANRFAALA 172
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ + G T QPVYVGDVA A A AG +Y+ GP+ + E++
Sbjct: 173 --LMSPVLPLIGGGATQMQPVYVGDVATAAADAVDGKAKAGAVYELGGPEVLSMREIMQI 230
Query: 254 FHVVMKK 260
V+++
Sbjct: 231 ILRVIER 237
>gi|384085137|ref|ZP_09996312.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 347
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 50/271 (18%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++G +L +L + G QI I R + +L + L QV + + +
Sbjct: 8 ILGGTGFVGRHLAERLSQDGHQIRILTRNRERNRENLLV---LPQVEVVECNVHDPIALE 64
Query: 83 KAIKYSNVVINLIG---------REFATKNFTIADAN-VEIPARLARLSKEMGVEKFIHI 132
+ ++ +VVINL+G ++ + + N +E+P +A L +G+ + +H+
Sbjct: 65 QQLEGRDVVINLVGILNENRPGRSDYPPERHGDFEKNHIELPRLVANLCGHLGIPRLLHM 124
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPE----------------------- 169
SAL A+P P+ Y+ R+K GE E++R+ E
Sbjct: 125 SALGANPIAPSAYL-------RSKGIGE-EIIRQSGENSAKNGHFNYLNGPKLLWGRGLK 176
Query: 170 ATIFRPSDMYGSGDKFLRYYGHMWRHV--FRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227
T FRPS ++G GD F + + R++ F +A G E QPV++ DV +A V +
Sbjct: 177 VTSFRPSIIFGEGDSFFNRFAQLLRNIPFFLPMA----GTEAKMQPVWIEDVVSAFVQSI 232
Query: 228 KDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
D GK + GPK Y L EL+ + ++
Sbjct: 233 DDEKTYGKAFDLCGPKVYTLGELIAYTQSLI 263
>gi|150398722|ref|YP_001329189.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium medicae WSM419]
gi|150030237|gb|ABR62354.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium medicae WSM419]
Length = 326
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 107/233 (45%), Gaps = 11/233 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G ++ L K+G +I + R L+ G++GQ+ F + R +
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVRRPDL-AGHLQPLGNVGQISFVQANLRYRN 67
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +A+ ++ VIN +G F T DA + AR + HISA+ AD
Sbjct: 68 SVDRAVDGADHVINCVGVLFENGRNTF-DAVQDFGARAVAEAARATGATLTHISAIGADA 126
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
S + RTK + E +L P A I RPS ++G D F + M R F
Sbjct: 127 R-------SDSSYARTKGRAEAAILEILPTAVILRPSIIFGPEDGFFNKFAEMAR--FSP 177
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G T QPVYV DVA A+ + A G IY+ GP+ E LD
Sbjct: 178 VLPLIGGGNTRFQPVYVTDVAEAVARSVDGKLAGGTIYELGGPQVLSFRECLD 230
>gi|433612115|ref|YP_007188913.1| putative nucleoside-diphosphate-sugar epimerase [Sinorhizobium
meliloti GR4]
gi|429550305|gb|AGA05314.1| putative nucleoside-diphosphate-sugar epimerase [Sinorhizobium
meliloti GR4]
Length = 326
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 11/233 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G ++ L K+G +I + R L+ G++GQ+ F + R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVRRPDL-AGHLQPLGNVGQISFVQANLRYRR 67
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +A+ ++ VIN +G F + T +A + AR + HISA+ AD
Sbjct: 68 SVDRAVDGADHVINCVGVLFESGRNTF-EAVQDFGARAVAEAARATGATLTHISAIGADA 126
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N + Y RTK + E +L P A I RPS ++G D F + M R F
Sbjct: 127 NSESSY-------ARTKGRAEAAILETLPAAVILRPSIIFGPEDGFFNKFAEMAR--FSP 177
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G T QPVYV DVA A+ + G IY+ GP+ E LD
Sbjct: 178 VLPLIGGGNTKFQPVYVTDVAEAVARSVDGTLTGGTIYELGGPQVLSFRECLD 230
>gi|118589450|ref|ZP_01546856.1| putative oxidoreductase protein [Stappia aggregata IAM 12614]
gi|118438150|gb|EAV44785.1| putative oxidoreductase protein [Labrenzia aggregata IAM 12614]
Length = 324
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 14/243 (5%)
Query: 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY 73
++ NG + TVFG SG++G ++ L ++G ++ R L+ G +GQ++
Sbjct: 3 TALNGKLVTVFGGSGFLGRHIVQALARRGYRVRAAVRRPDLATH-LQPLGAVGQIMPVQA 61
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
+ R + +A+ ++ V+N +G T + P +A ++ G+++ H+S
Sbjct: 62 NLRYRWSVDRAVIGADAVVNAVGILAPTGKQSFDAVQGFGPRAIAEAARAAGLDRITHVS 121
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ AD + Y R+K GE VL P++ I RPS ++G D+F + M
Sbjct: 122 AIGADAQSTSAY-------ARSKAVGEAGVLETLPDSVILRPSIVFGPEDEFFNKFADMA 174
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSE 249
R F + G ET QPVYV DVA A+ + A G Y+ GP+ R L +
Sbjct: 175 R--FSPVLPLLGGGETKFQPVYVCDVAEAVARSVDGQLAGGTTYELGGPEVKSFRACLED 232
Query: 250 LLD 252
+L+
Sbjct: 233 VLE 235
>gi|334318358|ref|YP_004550977.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83]
gi|384531484|ref|YP_005715572.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C]
gi|384538209|ref|YP_005722294.1| probabable NADH-ubiquinone oxidoreductase [Sinorhizobium meliloti
SM11]
gi|407722670|ref|YP_006842332.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti Rm41]
gi|333813660|gb|AEG06329.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C]
gi|334097352|gb|AEG55363.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83]
gi|336035101|gb|AEH81033.1| probabable NADH-ubiquinone oxidoreductase [Sinorhizobium meliloti
SM11]
gi|407320902|emb|CCM69506.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti Rm41]
Length = 326
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 11/233 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G ++ L K+G +I + R L+ G++GQ+ F + R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVRRPDL-AGHLQPLGNVGQISFVQANLRYRR 67
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +A+ ++ VIN +G F + T +A + AR + HISA+ AD
Sbjct: 68 SVDRAVDGADHVINCVGVLFESGRNTF-EAVQDFGARAVAEAARATGATLTHISAIGADA 126
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N + Y RTK + E +L P A I RPS ++G D F + M R F
Sbjct: 127 NSESSY-------ARTKGRAEAAILETLPAAVILRPSIIFGPEDGFFNKFAEMAR--FSP 177
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G T QPVYV DVA A+ + G IY+ GP+ E LD
Sbjct: 178 VLPLIGGGNTRFQPVYVTDVAEAVARSVDGTLTGGTIYELGGPQVLSFRECLD 230
>gi|413964205|ref|ZP_11403432.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. SJ98]
gi|413930037|gb|EKS69325.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. SJ98]
Length = 318
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 23/245 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G SG++GS+L N L G + + R L D V+ H D +
Sbjct: 7 ALIGGSGFIGSHLVNALVDLGKNVRVATRRRSNAAHLTLLPVD---VIETDVH----DPV 59
Query: 82 RKA--IKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ A I S+ VINL+G R A A+VE+P ++A + GV + +H+SA+
Sbjct: 60 QLAAFIDQSDAVINLVGILQGRRDDPYGPEFAKAHVELPRKIAAACEAKGVRRLLHMSAI 119
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADP P+ Y+ R+K GEK V + T+FR S ++G D L + + R
Sbjct: 120 GADPAGPSMYL-------RSKGDGEKIVRESGLDWTVFRSSVVFGPEDNLLNQFAFLER- 171
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+F + + + QPV+VGDVA A+V A G +Y+ GP Y L+EL+ +
Sbjct: 172 MFPVIPLACADAQF--QPVFVGDVAKAMVNVLDLDAANGHVYELAGPSVYTLAELVRFAG 229
Query: 256 VVMKK 260
+ K
Sbjct: 230 ATIGK 234
>gi|15964083|ref|NP_384436.1| oxidoreductase [Sinorhizobium meliloti 1021]
gi|15073259|emb|CAC41767.1| Probable NADH-ubiquinone oxidoreductase [Sinorhizobium meliloti
1021]
Length = 326
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 11/233 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G ++ L K+G +I + R L+ G++GQ+ F + R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVRRPDL-AGHLQPLGNVGQISFVQANLRYRR 67
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +A+ ++ VIN +G F + T +A + AR + HISA+ AD
Sbjct: 68 SVDRAVDGADHVINCVGVLFESGRNTF-EAVQDFGARAVAEAARATGATLTHISAIGADA 126
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N + Y RTK + E +L P A I RPS ++G D F + M R F
Sbjct: 127 NSESSY-------ARTKGRAEAAILETLPAAVILRPSIIFGPEDGFFNKFAEMAR--FSP 177
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G T QPVYV DVA A+ + G IY+ GP+ E LD
Sbjct: 178 VLPLIGGGNTRFQPVYVTDVAEAVARSVDGTLTGGTIYELGGPQVLSFRECLD 230
>gi|417101195|ref|ZP_11960397.1| putative NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli CNPAF512]
gi|327192023|gb|EGE59004.1| putative NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli CNPAF512]
Length = 396
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 113/247 (45%), Gaps = 23/247 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ +
Sbjct: 79 LVTVFGGSGFVGRHVVRALAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISLVQANL 133
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
R + I +A+ ++ V+N +G +E F DA E AR + HIS
Sbjct: 134 RYRNSIDRAVDGASHVVNCVGILQETGRNTF---DAVQEFGARAVAEAARNAGATLAHIS 190
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ A+ N S + RTK + E +L P+A IFRPS ++G D F + M
Sbjct: 191 AIGANSN-------SDSDYGRTKGRAEAAILSIKPDAVIFRPSIVFGPEDSFFNKFADMA 243
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
R + G +T QPVYV DVA A+ A GK+Y+ GP+ E L+
Sbjct: 244 R--MSPVLPLVGGGKTKFQPVYVEDVAEAVARAVDGKVPVGKVYELGGPEVLSFRECLET 301
Query: 254 FHVVMKK 260
V +
Sbjct: 302 MLKVTSR 308
>gi|319780071|ref|YP_004139547.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165959|gb|ADV09497.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 325
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 119/240 (49%), Gaps = 21/240 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ VFG SG++G ++ L K+G +I + R L+ G++GQ+ + R
Sbjct: 10 LVVVFGGSGFVGRHVVRALAKRGYRIRVACRRPDL-AGHLQPLGNVGQIQPVQANVRVRW 68
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISALN 136
+ +A++ ++ V+NL+ E + F+ A E AR +A ++ +G HISAL
Sbjct: 69 SVDRAVQGADHVVNLVAILHESGRQKFS---AVHEFGARAVAEAARSVGA-GLTHISALG 124
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD + S + RTK GEK VL +A IFRPS +G D F + +M R
Sbjct: 125 AD-------LDSESDYARTKALGEKAVLETIKDAVIFRPSINFGPEDGFFNRFANMAR-- 175
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD 252
+ + G +T QPVYVGDVA A+ + G+IY+ GPK + + ELLD
Sbjct: 176 YSPVLPLIGGGQTKFQPVYVGDVAEAVARSVDGKVDGGQIYELGGPKVLTFKQCMEELLD 235
>gi|381160326|ref|ZP_09869558.1| nucleoside-diphosphate-sugar epimerase [Thiorhodovibrio sp. 970]
gi|380878390|gb|EIC20482.1| nucleoside-diphosphate-sugar epimerase [Thiorhodovibrio sp. 970]
Length = 312
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 112/243 (46%), Gaps = 26/243 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++G L +L G Q +P R + RDLRL L + QP + +
Sbjct: 9 ILGGTGFVGRELALRLLACGYQCQLPTR-RVHRHRDLRL---LPGITLQPITTLDQASLT 64
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP--- 139
+A ++V+NLIG + + +VE+ R+ ++E GV + +H+SAL+A P
Sbjct: 65 EAFANCDLVVNLIGILNESARTSFRQVHVELVERVLAAAREAGVPRLLHMSALHACPPGQ 124
Query: 140 -------NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK-FLRYYGH 191
+PP+ Y+ + P T FRPS ++G D F R+ G
Sbjct: 125 ETTASPSSPPSEYLKSKGAGEALALAAKT------PATTAFRPSVIFGRHDSLFNRFAGL 178
Query: 192 M-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ W F LA PV+VGDVA A+V P++ G+ Y GP+ L EL
Sbjct: 179 IDWTPGFFPLACSGAR----FAPVWVGDVAEAMVRTIDRPESIGRAYDLCGPRTLSLREL 234
Query: 251 LDW 253
+++
Sbjct: 235 VEY 237
>gi|350559844|ref|ZP_08928684.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349782112|gb|EGZ36395.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 313
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 118/247 (47%), Gaps = 22/247 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++G ++ +L +G + I R + RDL++ L +V P + +
Sbjct: 8 ILGGTGFVGRHIVARLTDRGVAVRILTR-HPERHRDLKV---LPEVTLASGDPHDPATLE 63
Query: 83 KAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD-P 139
++ VINL+G E A+ E+ + + GV +F+ +SAL AD P
Sbjct: 64 DFFAGADAVINLVGILNEQGRDGSGFRKAHTELTEKALAAATTAGVRRFVQMSALKADMP 123
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVL--REFPEATIFRPSDMYGSGDKFL-RYYGHMWRHV 196
+PP++Y+ R+K E+ V FP T+FRPS ++G D FL R+ G +
Sbjct: 124 DPPSHYL-------RSKADAERAVFAASAFP-VTVFRPSVIFGPEDSFLNRFAGLLRIAP 175
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
F LA + PV+VGDVA V DP GK ++ GP+ Y L EL+ +
Sbjct: 176 FMPLA----RADARFAPVFVGDVADHFVNCLDDPSTFGKGFELCGPRSYTLRELVRYTAR 231
Query: 257 VMKKGEP 263
+ ++ P
Sbjct: 232 LTRRRRP 238
>gi|399042074|ref|ZP_10736929.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
CF122]
gi|398059456|gb|EJL51308.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
CF122]
Length = 326
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 120/240 (50%), Gaps = 25/240 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFIGRHIVRVLAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHI 132
R + + +A++ ++ V+N +G E +F +A E AR +A ++ +G K IHI
Sbjct: 64 RYRNSVDRAVEGADYVVNCVGILHETGRNSF---EAVQEFGARAVAEAARGVGA-KLIHI 119
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
SA+ A + + Y RTK + E + P+A IFRPS ++G D F + M
Sbjct: 120 SAIGAHAHSDSGY-------ARTKGRAEAAIHAIKPDAIIFRPSVVFGPEDGFFNKFADM 172
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
R G +T QPVYV DVA A+ A ++ AG++Y+ GP+ E L+
Sbjct: 173 AR--ISPFLPLIGGGKTKFQPVYVVDVAEAVAKAVENKVTAGEVYELGGPEVLTFRECLE 230
>gi|399910094|ref|ZP_10778408.1| NAD-dependent epimerase/dehydratase [Halomonas sp. KM-1]
Length = 313
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 122/247 (49%), Gaps = 24/247 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP-----R 76
TVFG +G++G+ + +L + G + I R + D GD P P R
Sbjct: 12 TVFGGTGFLGTRIVRELFEAGHSVRIAAR--HPTLPDWAEPGD-------PLEPMVTDVR 62
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
++ ++ +A++ ++ V+N + + + D +VE R+ARL++ GV+ FI +S +
Sbjct: 63 SEADVGRALEGASGVVNAVSLYVESAGLSFDDIHVEGAGRMARLARVAGVKTFIQLSGIG 122
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
A P+ + Y+ + +GE +V+ E+P+A I RPS M+G+GD F+ + R
Sbjct: 123 ASPSARSRYVG-------ARGRGEAKVIEEYPKAVIVRPSVMFGAGDAFITRLAGLTR-- 173
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
+ ++ +G+ + QPV+V DVA AI ++++ GP + ++
Sbjct: 174 LPVIPLFGQGQTRL-QPVHVVDVARAIARLLGANPPERRLFELGGPDVLPYRDAVNLLQA 232
Query: 257 VMKKGEP 263
+++ P
Sbjct: 233 QLERERP 239
>gi|433771701|ref|YP_007302168.1| putative nucleoside-diphosphate sugar epimerase [Mesorhizobium
australicum WSM2073]
gi|433663716|gb|AGB42792.1| putative nucleoside-diphosphate sugar epimerase [Mesorhizobium
australicum WSM2073]
Length = 325
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 118/244 (48%), Gaps = 17/244 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ VFG SG++G ++ L K+G +I + R L+ G++GQ+ + R
Sbjct: 10 LVVVFGGSGFVGRHVVRALAKRGYRIRVACRRPDL-AGHLQPLGNVGQIQPVQANVRVRW 68
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISALN 136
+ +A++ ++ V+NL+ E + F+ A E AR +A ++ +G HISAL
Sbjct: 69 SVDRAVQGADHVVNLVAILHESGRQKFS---AVHEFGARAIAEAARSVGA-GLTHISALG 124
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
ADP+ S + RTK GEK VL +A I RPS +G D F + +M R
Sbjct: 125 ADPDSE-------SDYARTKALGEKAVLETIADAVILRPSINFGPEDSFFNRFANMAR-- 175
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
+ + G +T QPVYVGDVA A+ + G++Y+ GP E +
Sbjct: 176 YSPVLPLIGGGQTKFQPVYVGDVAEAVARSVDGKIDGGQVYELGGPNVLTFKECMQELLT 235
Query: 257 VMKK 260
V+++
Sbjct: 236 VIER 239
>gi|448308312|ref|ZP_21498189.1| NAD-dependent epimerase/dehydratase [Natronorubrum bangense JCM
10635]
gi|445593600|gb|ELY47769.1| NAD-dependent epimerase/dehydratase [Natronorubrum bangense JCM
10635]
Length = 330
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 20/230 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G+ LC +L ++G ++ R DL ++ + Y D I
Sbjct: 40 VAGGTGFIGTALCTELHERGHEVTALSRSPRS--SDLPAAVEVARGDVSAY-----DSIA 92
Query: 83 KAIKYSNVVINLIGREFATKNFTIAD---ANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ + + V+NL+ K + AD ++ A L R +++ V++F+ +SAL ADP
Sbjct: 93 ETVAEHDAVVNLVALSPLYKPPSGADHETVHLGGTANLVRAAEDGDVDRFVQMSALGADP 152
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N G +++ RTK + E+ V E TIFRPS ++G G +F+ + +
Sbjct: 153 N-------GDTEYIRTKGEAERVVRDSQLEWTIFRPSVVFGEGSEFIEFTKQLTTPYVTG 205
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
L G +T QP++VGD+ + A +D G+IY+ GP+ LS+
Sbjct: 206 L---PGGGKTRFQPIWVGDLVPMLADALEDASHVGEIYEVAGPQIVTLSD 252
>gi|224824147|ref|ZP_03697255.1| NAD-dependent epimerase/dehydratase [Pseudogulbenkiania
ferrooxidans 2002]
gi|224603566|gb|EEG09741.1| NAD-dependent epimerase/dehydratase [Pseudogulbenkiania
ferrooxidans 2002]
Length = 315
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 16/232 (6%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++G YL +L + G +I R N+ ++ + +++ H + +
Sbjct: 8 VIGGSGFIGGYLGERLAEAGVEITFATR-NYEQHKEKLIVLPKTELVEVDVH--DQASLN 64
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ + V++++G ++ A+V +P ++ + + G+ + IHISAL ADPN P
Sbjct: 65 ALLHSHDAVVSMVGILHGSRQ-AFERAHVALPEKIIQACRYNGIRRLIHISALGADPNGP 123
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
++Y +TK E+ + + TI RPS ++G GD FL + H+ R L V
Sbjct: 124 SHY-------QQTKGIAEQRIEASGLDWTILRPSVVFGRGDSFLTLFAHLA----RTLPV 172
Query: 203 YK-KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
G +T QPV+ DVA A+VA + + G K Y L EL+ +
Sbjct: 173 LPLAGADTRFQPVWADDVARAMVACLANDATVHHKIELAGTKVYALRELVRY 224
>gi|347540099|ref|YP_004847524.1| NAD-dependent epimerase/dehydratase [Pseudogulbenkiania sp. NH8B]
gi|345643277|dbj|BAK77110.1| NAD-dependent epimerase/dehydratase [Pseudogulbenkiania sp. NH8B]
Length = 315
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 16/232 (6%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++G YL +L + G +I R N+ ++ + +++ H + +
Sbjct: 8 VIGGSGFIGGYLGERLAEAGVEITFATR-NYEQHKEKLIVLPKTELVEVDVH--DQTSLN 64
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ + V++++G ++ A+V +P ++ + + G+ + IHISAL ADPN P
Sbjct: 65 ALLHGHDAVVSMVGILHGSRQ-AFERAHVALPEKIIQACRYNGIRRLIHISALGADPNGP 123
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
++Y +TK E+ + + TI RPS ++G GD FL + H+ R L V
Sbjct: 124 SHY-------QQTKGIAEQRIEASGLDWTILRPSVVFGRGDSFLTLFAHLA----RTLPV 172
Query: 203 YK-KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
G +T QPV+ DVA A+VA + + G K Y L EL+ +
Sbjct: 173 LPLAGADTRFQPVWADDVARAMVACLANDATVHHKIELAGTKVYALRELVRY 224
>gi|395785445|ref|ZP_10465177.1| hypothetical protein ME5_00495 [Bartonella tamiae Th239]
gi|423717656|ref|ZP_17691846.1| hypothetical protein MEG_01386 [Bartonella tamiae Th307]
gi|395424992|gb|EJF91163.1| hypothetical protein ME5_00495 [Bartonella tamiae Th239]
gi|395427056|gb|EJF93172.1| hypothetical protein MEG_01386 [Bartonella tamiae Th307]
Length = 340
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 122/246 (49%), Gaps = 24/246 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPYHPRND 78
TVFG SG++G ++ L K+G ++ I R +Y ++ G++GQ + RN
Sbjct: 15 TVFGGSGFVGRHVVEALTKRGYRVRIAVRRPETAYYMLQ----IGEVGQTQMLKTNVRNR 70
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + +A+ ++ I L G ++ + + ++E +A L+ + IH+SALN D
Sbjct: 71 ESVARALIDADAAIFLPGVIDSSGKNSFKNVHIEGAKNVAELASSADIP-LIHMSALNVD 129
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
N Y+ +TK QGE+ V +A I RPS ++G D F + R F
Sbjct: 130 TNTSVSYM-------KTKAQGEQVVQSAHKKAIIMRPSVIFGPEDSFFNKIADISR--FS 180
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDWF 254
+ G +T QPVYVGD+A ++ + +D G+IY+ G + R+ + E+L
Sbjct: 181 WMIPMFGGGKTKLQPVYVGDIAEFVIQSLEDKVKEGQIYELGGKEVITFRHAVEEMLK-- 238
Query: 255 HVVMKK 260
V+++K
Sbjct: 239 -VILRK 243
>gi|225630980|ref|YP_002727771.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia sp. wRi]
gi|225592961|gb|ACN95980.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia sp. wRi]
Length = 316
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG +G++G ++ +L +G I I R N L+LCG+LGQ+ ++ +
Sbjct: 7 IFGGTGFIGKHIVRRLAAEGYLIKIFTR-NQEKAACLKLCGNLGQISIFKGDFFDEKSVL 65
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ ++ +V INL+G + K +V+I R+A+ +K V IH SA+ +
Sbjct: 66 EGMEECDVAINLVGILYEAKKHDFYAVHVKIAERIAKAAKMKNVPMMIHFSAMGIEN--- 122
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV-FRKLA 201
S S++ ++K +GEK V F +A I RPS ++G D F + + + F L
Sbjct: 123 ----SKLSKYAKSKLEGEKAVTSAFQKAIIIRPSLVFGKEDNFFNKFARLATILPFLPLI 178
Query: 202 VYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
G T K QP+ V D+A + KIY GPK Y LL +
Sbjct: 179 ----GNGTTKFQPICVTDLAEVVYRIISFNKQDKKIYNMGGPKVYSFKSLLKF 227
>gi|227824169|ref|YP_002828142.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii NGR234]
gi|227343171|gb|ACP27389.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii NGR234]
Length = 326
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 108/233 (46%), Gaps = 11/233 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G ++ L K+G +I + R L+ G +GQ+ F + R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVRRPDL-AGHLQPLGTMGQISFVQANLRYRK 67
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +A++ ++ VIN +G F + T DA + AR + HISA+ A+
Sbjct: 68 SVDRAVEGADHVINCVGVLFESGRNTF-DAVQDFGARAVAEAARAAGATLTHISAIGANT 126
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N SQ+ RTK + E +L PEA I RPS ++G D F + M R F
Sbjct: 127 NSE-------SQYARTKGRAEIAILETVPEAIILRPSIIFGPEDDFFNKFASMAR--FAP 177
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
G +T QPVYV DVA A+ A G IY+ G + E L+
Sbjct: 178 ALPLIGGGQTKFQPVYVTDVAEAVARAVDGKLKGGTIYELGGAQVLSFRECLE 230
>gi|159184245|ref|NP_353326.2| NADH-ubiquinone oxidoreductase [Agrobacterium fabrum str. C58]
gi|159139572|gb|AAK86111.2| NADH-ubiquinone oxidoreductase [Agrobacterium fabrum str. C58]
Length = 326
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 114/239 (47%), Gaps = 23/239 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRMLAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFAQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISA 134
R D I KA++ ++ V+N +G A DA E A+ +A +++ G HISA
Sbjct: 64 RYRDSIIKAVEDADHVVNCVGI-LAESGRNTFDAVQEFGAKAIAEAARDTGA-TLTHISA 121
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ AD N T Y RTK + E + P A I RPS ++G D F + M R
Sbjct: 122 IGADANSQTGY-------GRTKGRAEAAIHSVLPGAVILRPSIIFGPEDDFFNKFAKMAR 174
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
++ F L G +T QPVYV DVA A+ + G IY+ GP + L+
Sbjct: 175 NLPFLPLI---GGGKTKFQPVYVEDVAEAVARSVDGKLKPGAIYELGGPDVMTFRDCLE 230
>gi|146278809|ref|YP_001168968.1| NADH dehydrogenase [Rhodobacter sphaeroides ATCC 17025]
gi|145557050|gb|ABP71663.1| NADH dehydrogenase [Rhodobacter sphaeroides ATCC 17025]
Length = 328
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 12/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ +QG ++ + R + ++ G +GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAQQGWRVRVAVR-RPNEALFVKPYGVVGQVEPVFCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R + ++ V+N +G E AR+ARL+ GV+ + ISA+ AD
Sbjct: 63 SVRAVMHGADAVVNCVGILAEAGKNRFQSVQAEGAARVARLAAAEGVQALVQISAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ P+ Y R+K GE VL+ FP A I RPS ++G D F + M R
Sbjct: 123 DSPSAY-------ARSKAAGEAAVLQAFPRAVILRPSVIFGPEDDFFNRFARMARF---S 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
+ G ET QPV+V DVA A VA A G IY+ GP L+ V++
Sbjct: 173 PVLPVVGGETRFQPVFVDDVAQAAVAGVLGRAAPG-IYELGGPDAESFRALMQMLLRVIE 231
Query: 260 K 260
+
Sbjct: 232 R 232
>gi|255596838|ref|XP_002536628.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus
communis]
gi|223519044|gb|EEF25754.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus
communis]
Length = 198
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 113/209 (54%), Gaps = 20/209 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TV G SG++GS + +L + G Q+ + R + L L ++ QV+ H ++ +
Sbjct: 6 TVLGGSGFVGSSVVARLDQAGYQVKVLTRRR-EQAKHLILLPNV-QVVECDIH--DEAAL 61
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+ ++ S+ VINL+G T+ T + + P ++A+L +++ + + +H+SAL A N
Sbjct: 62 KTHLQGSDAVINLVGILHQTRTNTFEQMHHQFPRQVAQLCEQLAIPRLLHMSALQASANA 121
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPE---ATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P+ Y+ RTK G++ VL EF + TIFRPS ++G+ D+F+ + + +
Sbjct: 122 PSEYL-------RTKAAGDQAVL-EFSKKLHVTIFRPSVIFGTRDRFINLFAKL----IQ 169
Query: 199 KLAVYKKGEETIK-QPVYVGDVAAAIVAA 226
+ V K QP++V DVAAA+V A
Sbjct: 170 WIPVLALAMPQAKFQPIWVEDVAAAMVNA 198
>gi|335033029|ref|ZP_08526401.1| NADH-ubiquinone oxidoreductase [Agrobacterium sp. ATCC 31749]
gi|333795705|gb|EGL67030.1| NADH-ubiquinone oxidoreductase [Agrobacterium sp. ATCC 31749]
Length = 326
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 114/239 (47%), Gaps = 23/239 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRMLAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFAQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISA 134
R D I KA++ ++ V+N +G A DA E A+ +A +++ G HISA
Sbjct: 64 RYRDSIIKAVEDADHVVNCVGI-LAESGRNTFDAVQEFGAKAIAEAARDAGA-TLTHISA 121
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ AD N T Y RTK + E + P A I RPS ++G D F + M R
Sbjct: 122 IGADANSQTGY-------GRTKGRAEAAIHSVLPGAVILRPSIVFGPEDDFFNKFAKMAR 174
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
++ F L G +T QPVYV DVA A+ + G IY+ GP + L+
Sbjct: 175 NLPFLPLI---GGGKTKFQPVYVEDVAEAVARSVDGKLKPGAIYELGGPDVMTFRDCLE 230
>gi|87201093|ref|YP_498350.1| NAD-dependent epimerase/dehydratase [Novosphingobium
aromaticivorans DSM 12444]
gi|87136774|gb|ABD27516.1| NAD-dependent epimerase/dehydratase [Novosphingobium
aromaticivorans DSM 12444]
Length = 310
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 115/236 (48%), Gaps = 22/236 (9%)
Query: 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL--CGDLGQVLFQPYHPR 76
++ + G +G+ G++L +L +G+++ + R + R RL G LGQ+ F
Sbjct: 1 MLVALVGGTGFFGTHLAQELLARGARLRVCSR---HPERAFRLKPLGTLGQIQFVATDVT 57
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ A+ + V+NL+G F+ ++ V AR+A +K G + F+H+SAL
Sbjct: 58 KPRTVAAALTGVDAVVNLVG-AFSGDLDSLQGEGV---ARVAEAAKAGGAKAFVHVSALG 113
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD Y RTK +GEK L FP AT+ RPS ++G D FL +G +
Sbjct: 114 ADAGSDVAY-------ARTKAEGEKAALAAFPTATVVRPSILFGEDDNFLNMFGGL---- 162
Query: 197 FRKLAVYKK-GEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSEL 250
KL V G QPV+V D A A+ A DP A G+ Y+ GP+ + EL
Sbjct: 163 MAKLPVLPVFGPTAQLQPVFVDDAAEAVANALADPRAHGGRTYELAGPEVVTMGEL 218
>gi|317050287|ref|YP_004111403.1| NAD-dependent epimerase/dehydratase [Desulfurispirillum indicum S5]
gi|316945371|gb|ADU64847.1| NAD-dependent epimerase/dehydratase [Desulfurispirillum indicum S5]
Length = 292
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 121/246 (49%), Gaps = 26/246 (10%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDD 79
V G +G++GS++ + L +QG Q+ + R + LR + LG + D
Sbjct: 4 AVTGGTGFVGSHVVSALLEQGYQVRLLARKP----QSLRPGMESVLGSM-------EKYD 52
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ + ++ + V++L+G REF T + + + + ++E GV +FIH+SAL +
Sbjct: 53 SLLELVEGCDAVVHLVGIIREFPPA-ITYEALHTQATLSMLKAAREKGVNRFIHMSALGS 111
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
P+ S ++RTK+ EK V + TIF+PS ++G D+F+ +
Sbjct: 112 APD-------SRSAYHRTKFVAEKAVQESGLDYTIFKPSVIFGPRDEFINLLLSFLK--L 162
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
+ V G+ + QPV V ++A A + P A G+ Y+ GP+RY ELLD +
Sbjct: 163 PAIPVIGDGKYQL-QPVAVDNIAQAFARCIESPAARGRTYEVGGPRRYTYDELLDALAAL 221
Query: 258 MKKGEP 263
KG+P
Sbjct: 222 RGKGKP 227
>gi|83313030|ref|YP_423294.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Magnetospirillum
magneticum AMB-1]
gi|82947871|dbj|BAE52735.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Magnetospirillum
magneticum AMB-1]
Length = 339
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 118/256 (46%), Gaps = 35/256 (13%)
Query: 20 VATVFGASGYMGSYLCNKLGKQG----SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
V TVFG SG++G + +L QG + + P F L+ GD+GQV
Sbjct: 9 VVTVFGGSGFIGRNVVKRLAAQGWVVRAAVRDPIAAEF-----LKPMGDVGQVTPLRADI 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ + A+ + V+N +G + + T +V+ A +A +K GV + +H+SAL
Sbjct: 64 TDPKAVAMAVAGVDAVVNAVGILYESGRATFDAIHVKGAANVAAAAKAAGVARLVHVSAL 123
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD N Y R+K GE+ VL FP A++ RPS ++G D F +G +
Sbjct: 124 GADKNSEAAY-------ARSKAAGEEAVLAAFPGASVVRPSVVFGPDDDFFNRFGKLA-M 175
Query: 196 VFRKLAVYKK-------GEE-----------TIKQPVYVGDVAAAIVAACKDPDAAGKIY 237
V L V+ GE I QPV V DVA A+V D AGK +
Sbjct: 176 VSPVLPVFTGDGFKPVCGETGCSIDLFGSGGPIFQPVSVSDVAQAVVQILDDTRHAGKTF 235
Query: 238 QAVGPKRYLLSELLDW 253
+ GP+RY + E+++
Sbjct: 236 ELGGPRRYSMKEIMEL 251
>gi|86747786|ref|YP_484282.1| dehydrogenase [Rhodopseudomonas palustris HaA2]
gi|86570814|gb|ABD05371.1| dehydrogenase [Rhodopseudomonas palustris HaA2]
Length = 321
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 16/230 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ + L ++ +I + R L+ G +GQ+ + R
Sbjct: 8 LVTVFGGSGFIGRHVVSALARRDYRIRVAVRRPEL-AGHLQPLGRVGQIHAVQANLRYPA 66
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
I A++ ++V INL+G E + F DA A + + +H+SA+ A
Sbjct: 67 SIEAAMRGAHVAINLVGILAEGGAQKF---DAVQAEGAASIAKAAAAVGARMVHVSAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D P Y R+K GE+ VL P ATI RPS ++G D+F + + R +
Sbjct: 124 DAASPARY-------ARSKAAGEQAVLAAVPTATILRPSVVFGPEDQFTNRFASLARMLP 176
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
V G ET QPVYVGDVA A+ A G Y+ GP++ +
Sbjct: 177 ---VVPLVGAETKLQPVYVGDVATAVAEAVDGNTRPGATYELGGPEQLTM 223
>gi|325291730|ref|YP_004277594.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Agrobacterium sp.
H13-3]
gi|325059583|gb|ADY63274.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Agrobacterium sp.
H13-3]
Length = 326
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 108/225 (48%), Gaps = 23/225 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRMLAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFAQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISA 134
R D I KAI+ ++ V+N +G A DA E A+ +A ++ G HISA
Sbjct: 64 RYRDSIVKAIEDADHVVNCVG-ILAESGRNTFDAVQEFGAKAIAEAARNAGA-TLTHISA 121
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ AD N PT Y RTK + E + P A I RPS ++G D F + M R
Sbjct: 122 IGADANSPTGY-------GRTKGRAEAAIHSVLPGAVILRPSIIFGPEDDFFNKFAKMAR 174
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
+ F L G +T QPVYV DVA A+ + G IY+
Sbjct: 175 SLPFLPLI---GGGKTKFQPVYVEDVAEAVARSVDGKLKPGAIYE 216
>gi|448415192|ref|ZP_21577992.1| nucleoside-diphosphate sugar epimerase [Halosarcina pallida JCM
14848]
gi|445680850|gb|ELZ33291.1| nucleoside-diphosphate sugar epimerase [Halosarcina pallida JCM
14848]
Length = 298
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 53/289 (18%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++G+ LC +L +G ++ R + + +G V D I
Sbjct: 5 VVGGSGFIGTNLCRELKSRGHEVTALSRSPSSEDLPSGVNKTMGNVTAY-------DSIT 57
Query: 83 KAIKYSNVVINLI----------GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
+A + + V NL+ G E K NV R +++ V +H+
Sbjct: 58 EAFEGMDAVYNLVALSPLFKPSGGNEMHDKIHRQGTENV------VRAAEKHDVGHLVHM 111
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
SAL ADP+ PT YI R K + E+ V E T+FRPS ++G G +F+ + M
Sbjct: 112 SALGADPDGPTAYI-------RAKGRAEEIVTESVLEWTVFRPSVVFGDGGEFVSFT-KM 163
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ ++V G +T QP++VGD+ + A +D G++Y+ GP + L+E+
Sbjct: 164 LAPPY--VSVLPGGGKTRFQPIWVGDLVPMMSDAVEDESHVGQVYEIGGPDKMTLAEIAK 221
Query: 253 WFHVVMKKGEPDYGYYRYDLRYDPVMPLK-------LFINGLFPGYPMG 294
H + + + V+PL L + G PG+PMG
Sbjct: 222 LIH-------------KSNGQSTTVVPLPMGLAKIGLTVAGSVPGFPMG 257
>gi|42520933|ref|NP_966848.1| NADH-ubiquinone oxidoreductase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|99036018|ref|ZP_01315057.1| hypothetical protein Wendoof_01000095 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|42410674|gb|AAS14782.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 316
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 14/233 (6%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG +G++G ++ +L +G I I R N L+LCG+LGQ+ ++ +
Sbjct: 7 IFGGTGFIGKHIVRRLAAEGYLIKIFTR-NQEKAACLKLCGNLGQISIFKGDFFDEKSVL 65
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
++ +V INL+G + K +V+I R+A+ +K V IH SA+ +
Sbjct: 66 DGMEECDVAINLVGILYEAKKHDFYAVHVKIAERIAKAAKMKNVPMMIHFSAMGIEN--- 122
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV-FRKLA 201
S S++ ++K +GEK V F +A I RPS ++G D F + + + F L
Sbjct: 123 ----SKLSKYAKSKLEGEKAVTSAFQKAIIIRPSLVFGKEDNFFNKFARLATILPFLPLI 178
Query: 202 VYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
G T K QP+ V D+A + KIY GPK Y LL +
Sbjct: 179 ----GNGTTKFQPICVTDLAEVVYRIISFNKQDKKIYNMGGPKVYSFKSLLKF 227
>gi|299068339|emb|CBJ39563.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
CMR15]
Length = 334
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 117/247 (47%), Gaps = 29/247 (11%)
Query: 23 VFGASGYMGSYLCNKL--------GKQGSQIIIPYR-GNFYDVRDLRLCGDLGQVLFQPY 73
V G +G++G+ L + L G ++I+P R +L L + + +
Sbjct: 8 VLGGTGFIGTQLLSHLVTETFAAPGLPDGRVIVPTRDAESARAHNLTLLPRVDVMEADVH 67
Query: 74 HPRNDDEIRKAIKYSN----VVINLIG--REFATKNFTIA--DANVEIPARLARLSKEMG 125
D + A+ VINL+G ++ + A A+V++P R+ + G
Sbjct: 68 ADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRRAHVDLPRRVVDACRRHG 127
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++ +H+SAL ADP +G S + R+K GE+ V + T+FRPS ++G GD F
Sbjct: 128 VKRLLHMSALGADP-------AGPSMYQRSKGDGERIVTDSGLDWTVFRPSVVFGPGDHF 180
Query: 186 LRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L + + R F LA E QPVYV DVA A A +P G +Y VGP+
Sbjct: 181 LNLFARLQRLAPFVPLA----RAEARFQPVYVDDVAVAFAHALDNPATFGHVYPLVGPRV 236
Query: 245 YLLSELL 251
Y L+EL+
Sbjct: 237 YTLAELV 243
>gi|262276743|ref|ZP_06054536.1| putative NADH-ubiquinone oxidoreductase 39 kda subunit [alpha
proteobacterium HIMB114]
gi|262223846|gb|EEY74305.1| putative NADH-ubiquinone oxidoreductase 39 kda subunit [alpha
proteobacterium HIMB114]
Length = 317
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 21/237 (8%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL---CGDLGQVLFQPYHPRND 78
+ FG +G++GS + L +G +I I R N YD ++L CGD GQ+ + +
Sbjct: 8 SFFGGAGFIGSSIVKILANKGYEIKIATR-NPYDEDVIQLKSSCGDPGQISLHKININSK 66
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLAR-LSKEMGVEKFIHISALNA 137
D++ IK SN+ INL+G + T + + + L + K+ ++ FIH S+L
Sbjct: 67 DQVEAFIKESNICINLVGILYEKGQNTFKKIHTDFVSNLVESIKKQNSIKHFIHFSSLG- 125
Query: 138 DPNPPTYYISGG--SQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
+ GG S++ +K++ E+ + TI +PS +YG G+ + +M+
Sbjct: 126 --------VKGGTESKYLESKFKAEELIKENLENYTIIKPSVVYGGGE---NDFTNMFAK 174
Query: 196 VFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ + + +K QPVYVGD+A I D + + ++ VG + + L EL+
Sbjct: 175 LAKLFPIIPLANSNVKFQPVYVGDIAKGIEKII-DEEIKKETFEFVGDEIFTLEELV 230
>gi|400756261|ref|YP_006564629.1| NAD dependent epimerase [Phaeobacter gallaeciensis 2.10]
gi|398655414|gb|AFO89384.1| putative NAD dependent epimerase [Phaeobacter gallaeciensis 2.10]
Length = 329
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K+G ++ + R + ++ G GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMYVKPYGVPGQVEPVLCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ ++ ++ V+N +G E F A+ R+AR++ + GV +H+SA+ A
Sbjct: 63 SVAAVMQGADAVVNCVGILNELGKNTFDAVQADGA--DRIARIAADQGVSTMVHVSAIGA 120
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D + + Y ++K GE VL PEA I RPS ++G+ D+F + M R +
Sbjct: 121 DQDSDSAY-------AQSKAAGETAVLTHMPEAVILRPSIIFGAEDQFFNRFAAMTR-LS 172
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
L + +T QPVYV DVA A V+A G +Y+ GP+
Sbjct: 173 PILPIAHA--DTKFQPVYVDDVAKAAVSALLGQAKPG-VYELGGPE 215
>gi|399068560|ref|ZP_10749079.1| putative nucleoside-diphosphate sugar epimerase [Caulobacter sp.
AP07]
gi|398045648|gb|EJL38348.1| putative nucleoside-diphosphate sugar epimerase [Caulobacter sp.
AP07]
Length = 322
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 59 LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLA 118
+R+ GD+GQ+ + RN + +A++ + +NL+G + T + +A
Sbjct: 42 MRMLGDVGQIEVVQANLRNAPSVARALQGAEGAVNLVGVLWETGRQKFQALHAMGARTVA 101
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
+K GV++ +HISAL AD P S++ RTK GE V FP A I RPS +
Sbjct: 102 EQAKAAGVKRLVHISALGADLQSP-------SKYARTKAMGEAAVREAFPGAVILRPSVV 154
Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
+G+ DKF +G M VF L + G ET QPV+VGDVAA + A P A G Y+
Sbjct: 155 FGADDKFFNKFGEM-AGVFPALPLIGGG-ETKFQPVFVGDVAAVVAKAVASPSAEGLTYE 212
Query: 239 AVGPKRYLLSELLD 252
GP Y LL+
Sbjct: 213 LGGPTVYSFKALLE 226
>gi|448499172|ref|ZP_21611186.1| NAD-dependent epimerase/dehydratase [Halorubrum coriense DSM 10284]
gi|445697509|gb|ELZ49571.1| NAD-dependent epimerase/dehydratase [Halorubrum coriense DSM 10284]
Length = 298
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 40/284 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYR--GNFYDVRDLRLCGDLGQVLFQPYHPRNDDE 80
V G +G++GSYLC L G + R G D + G G V + D
Sbjct: 5 VAGGTGFIGSYLCRALADDGHAVTALSRSPGETPD----GVTGVSGDV-------TDYDS 53
Query: 81 IRKAIKYSNVVINLIGR----EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ A+ + V+NL+ E N + A L R +++ GV+ F+ +SAL
Sbjct: 54 VASAVDGHDAVVNLVALSPLFEPDGGNRMHDRIHRGGTANLVRAAEDGGVDGFVQLSALG 113
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
ADPN T YI R K + E+ V + TIFRPS ++G G +F+ + +
Sbjct: 114 ADPNGDTAYI-------RAKGEAEEIVRDSDLDWTIFRPSVVFGEGGEFVSFTKRLKGMF 166
Query: 197 FRKLAVY--KKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ +Y G +T QP++V D+ I AA D + G+ Y+ GP+ L ++ D
Sbjct: 167 APGVPLYPLPGGGKTRFQPIHVEDLVPMIAAAVTDDEHVGETYEIGGPEVLTLRQVTDLV 226
Query: 255 HVVMKKGEPDYGYYRYDLRYDPV-MPLK---LFINGLFPGYPMG 294
+ +KG + P+ MPL L + G PG+PMG
Sbjct: 227 YEAEQKG----------VTIVPLPMPLAKVGLSVLGAVPGFPMG 260
>gi|392577605|gb|EIW70734.1| hypothetical protein TREMEDRAFT_29093, partial [Tremella
mesenterica DSM 1558]
Length = 344
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 24/234 (10%)
Query: 30 MGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH-----PRNDDEIRKA 84
+GSY+ L ++ N + D RL LG+ + P P + ++R+A
Sbjct: 1 LGSYIARSLVADPRNNVLLVSRNPKSLHD-RLS-HLGKQILPPISADIASPSSSPQLREA 58
Query: 85 IKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTY 144
++ ++ V++L+G AT+ + D + R+A +KE GVE+ + ISA+ AD N
Sbjct: 59 MEGAHAVVSLVGLLAATEK-EMVDVQQDGARRVADAAKEKGVERVVMISAIGADKN---- 113
Query: 145 YISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYK 204
G + + RTK E+ L P AT+ RPS ++G GD F + M + L V+
Sbjct: 114 ---GVTPYQRTKAAAEEYFLSLHPTATVIRPSIVFGPGDSFFTRFAEMAKW-LPFLPVFG 169
Query: 205 KGEETIKQPVYVGDVAAAIVAACKDPDA------AGKIYQAVGPKRYLLSELLD 252
G T QPVYVGD+A A+ C+D DA G+I +A GP E+++
Sbjct: 170 GG-TTKFQPVYVGDLARAVEICCRD-DAKVVDMVGGRIIEAGGPDILTYREIMN 221
>gi|222475667|ref|YP_002564084.1| NADH-ubiquinone oxidoreductase [Anaplasma marginale str. Florida]
gi|255003659|ref|ZP_05278623.1| NADH-ubiquinone oxidoreductase, putative [Anaplasma marginale str.
Puerto Rico]
gi|255004783|ref|ZP_05279584.1| NADH-ubiquinone oxidoreductase, putative [Anaplasma marginale str.
Virginia]
gi|222419805|gb|ACM49828.1| NADH-ubiquinone oxidoreductase, putative [Anaplasma marginale str.
Florida]
Length = 326
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 118/242 (48%), Gaps = 14/242 (5%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
VFG SG++G ++ + L +G + + R N L+L G+LGQV P N I
Sbjct: 14 VVFGGSGFIGRHVVSSLVLRGYTVSVFTR-NPEKAARLKLIGNLGQVQIVPGDLSNALLI 72
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
K + +V++NL+G + + + +V +P +A+ + + G + +H S +++D
Sbjct: 73 EKLLAECDVIVNLVG-SMSPRRDVLRYLHVTVPGNIAKFAGQHG-KMLVHFSTMSSDVAS 130
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
++Y + +K +GE V +A I +P+ ++G D F + + R V L
Sbjct: 131 SSFYAT-------SKLEGENTVRSVCKDAVIVKPNLVFGDEDHFFSKFAKLAR-VLPFLP 182
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
V ++ QPVYVG+V A + +A + GK + GPK Y + EL+ + +
Sbjct: 183 VVCG--NSMVQPVYVGEV-AELTSAIVEGQETGKTLEVCGPKTYSMRELMQFILQTTARD 239
Query: 262 EP 263
+P
Sbjct: 240 KP 241
>gi|448474961|ref|ZP_21602726.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
gi|445816953|gb|EMA66835.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
Length = 298
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 40/284 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-RLCGDLGQVLFQPYHPRND-DE 80
V G +G++GS LC L G +DV L R GD + + D D
Sbjct: 5 VAGGTGFIGSNLCRALVDGG-----------HDVTALSRSPGDTPEGVAPAEGDVTDYDS 53
Query: 81 IRKAIKYSNVVINLIGRE--FATKNFTIADANVEI--PARLARLSKEMGVEKFIHISALN 136
I A + + V+NL+ F K + + L R ++ G ++F+ +SAL
Sbjct: 54 IAAAAEGQDAVVNLVALSPLFEPKGGNVMHDRIHRGGTENLVRAAEAAGADRFVQLSALG 113
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
ADP+ T YI R K Q E V + TIFRPS ++G G +F+ + +
Sbjct: 114 ADPDGTTAYI-------RAKGQAETVVRESDLDWTIFRPSVVFGDGGEFVSFTKRLKGMF 166
Query: 197 FRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ +Y G +T QP++V D+ +VAA +D + G+ Y+ GP+ L ++ D
Sbjct: 167 APGVPLYPLPGGGKTRFQPIHVEDLVPMLVAALEDDEHVGETYEVGGPEVLTLRQVTDLV 226
Query: 255 HVVMKKGEPDYGYYRYDLRYDPV-MPLK---LFINGLFPGYPMG 294
+ +KG + P+ MPL L + G PG+PMG
Sbjct: 227 YAAERKG----------VTIVPLPMPLARIGLTVLGAVPGFPMG 260
>gi|241207267|ref|YP_002978363.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240861157|gb|ACS58824.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 326
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 110/250 (44%), Gaps = 23/250 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYNIRVAVRRPDLAGF-----LQPLGNVGQISFVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
R I +A+ ++ V+N +G E F DA E R + HIS
Sbjct: 64 RYRSSIDRAVDGASHVVNCVGILHEAGRNTF---DAVQEFGGRAVAEAARGAGATLTHIS 120
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ AD S + RT+ + E +L +A IFRPS ++G D F + M
Sbjct: 121 AIGADAK-------SDSDYGRTQGRAETAILSVKTDAVIFRPSIVFGPEDSFFNKFAEMA 173
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
R + G +T QPVYV D+A A+ A A GK+Y+ GP+ E L+
Sbjct: 174 R--MSPILPLIGGGKTKFQPVYVEDIAEAVARAVDGKVAGGKVYELGGPEVLSFRECLET 231
Query: 254 FHVVMKKGEP 263
V + P
Sbjct: 232 MLKVTCRKNP 241
>gi|254995467|ref|ZP_05277657.1| NADH-ubiquinone oxidoreductase, putative [Anaplasma marginale str.
Mississippi]
Length = 326
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 118/242 (48%), Gaps = 14/242 (5%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
VFG SG++G ++ + L +G + + R N L+L G+LGQV P N I
Sbjct: 14 VVFGGSGFIGRHVVSSLVLRGYTVSVFTR-NPEKAARLKLIGNLGQVQIVPGDLSNALLI 72
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
K + +V++NL+G + + + +V +P +A+ + + G + +H S +++D
Sbjct: 73 EKLLAECDVIVNLVG-SMSPRRDVLRYLHVTVPGNIAKFAGQHG-KMLVHFSTMSSDVAS 130
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
++Y + +K +GE V +A I +P+ ++G D F + + R V L
Sbjct: 131 SSFYAT-------SKLEGENTVRSVCKDAVIVKPNLVFGDEDHFFSKFAKLAR-VLPFLP 182
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
V ++ QPVYVG+V A + +A + GK + GPK Y + EL+ + +
Sbjct: 183 VVCG--NSMVQPVYVGEV-AELTSAIVEGQETGKTLEVCGPKTYSMRELMQFILQTTARD 239
Query: 262 EP 263
+P
Sbjct: 240 KP 241
>gi|448363407|ref|ZP_21552007.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
gi|445646220|gb|ELY99209.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
Length = 309
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRG-NFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++G++LC +L ++G ++ R D +L DL Y D I
Sbjct: 5 VAGGTGFIGTHLCTELAERGHEVTALSRNPATEDAAELPDEVDLSTGDVSAY-----DSI 59
Query: 82 RKAIKYSNVVINLIGRE------FATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
A+ + ++NL+ T + T+ E L R ++E GV++F+ ISAL
Sbjct: 60 VDAVAGHDAIVNLVALSPLYQPPDGTDHETVHLGGTE---NLVRAAEENGVDRFLQISAL 116
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADP+ PT YI RTK + E V TI RP+ ++G G +FL + +
Sbjct: 117 GADPDGPTAYI-------RTKGRAESIVREAALSWTIVRPAVVFGDGGEFLTFAKQLTTP 169
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
L G +T QP++VGD A + A +D G+ Y+ GP+ L++
Sbjct: 170 YLTGL---PGGGKTRFQPIWVGDFAPLLADALEDDSHVGRTYELGGPQVVTLAD 220
>gi|149928234|ref|ZP_01916478.1| NAD-dependent epimerase/dehydratase [Limnobacter sp. MED105]
gi|149823040|gb|EDM82281.1| NAD-dependent epimerase/dehydratase [Limnobacter sp. MED105]
Length = 317
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 122/280 (43%), Gaps = 30/280 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++G +CN+L K G +I +P R YD L Q++ H R +
Sbjct: 2 VIGGSGFLGQAVCNQLAKAGYRITVPTRR--YDKAKHLLTLPTCQIIEANIHDRA--TLG 57
Query: 83 KAIKYSNVVINLIGREFAT------KNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + ++V+NL+G + +NF + +VE P L + G ++ +H+SAL
Sbjct: 58 RLVSGQDIVVNLLGVLHSKPGKPYGQNFRV--NHVEFPKALCTAMSKHGAKRIVHVSALG 115
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
P S + R+K GE V TI RPS ++G DKFL + + +
Sbjct: 116 VGVQNP-----APSMYLRSKTDGEAVVKDSGLAWTILRPSVVFGREDKFLNTFASLAKIA 170
Query: 197 -FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD--PDAAGKIYQAVGPKRYLLSELLDW 253
F LA G + QPV V DVA A+ A +D D Y VG + + L EL+
Sbjct: 171 PFIPLA----GADARFQPVSVSDVAKAVFACVEDQGKDTLHNTYDLVGTEIFTLKELVKL 226
Query: 254 FHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPM 293
+ K +G D + F+ L PG P+
Sbjct: 227 SARAVGKNPLVFGI------PDVAAKAQAFLMELAPGEPL 260
>gi|300692902|ref|YP_003753897.1| NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum PSI07]
gi|299079962|emb|CBJ52639.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
PSI07]
gi|344168492|emb|CCA80782.1| putative NADH dehydrogenase (ubiquinone) [blood disease bacterium
R229]
gi|344173236|emb|CCA88380.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia syzygii R24]
Length = 334
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 117/247 (47%), Gaps = 29/247 (11%)
Query: 23 VFGASGYMGSYLCNKL--------GKQGSQIIIPYR-GNFYDVRDLRLCGDLGQVLFQPY 73
V G +G++G+ L + L G ++I+P R +L L + + +
Sbjct: 8 VLGGTGFIGTRLLSCLVTETFAAPGLPDGRVIVPTRDAESARAHNLTLLPRVDVMEADVH 67
Query: 74 HPRNDDEIRKAIKYSN----VVINLIG--REFATKNFTIA--DANVEIPARLARLSKEMG 125
D + A+ VINL+G ++ + A A+V++P R+ + G
Sbjct: 68 ADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRRAHVDLPRRVVDACRRHG 127
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++ +H+SAL ADP +G S + R+K GE+ + + T+FRPS ++G GD F
Sbjct: 128 VKRLLHMSALGADP-------AGPSMYQRSKGDGERVITGSDLDWTVFRPSVVFGPGDHF 180
Query: 186 LRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L + M R F LA E QPVYV DVAAA A +P +Y VGP+
Sbjct: 181 LNLFARMQRLAPFVPLAC----AEARFQPVYVDDVAAAFAHALDNPATFRHVYPLVGPRV 236
Query: 245 YLLSELL 251
Y L+EL+
Sbjct: 237 YTLAELV 243
>gi|407799440|ref|ZP_11146333.1| NAD-dependent epimerase/dehydratase [Oceaniovalibus guishaninsula
JLT2003]
gi|407058625|gb|EKE44568.1| NAD-dependent epimerase/dehydratase [Oceaniovalibus guishaninsula
JLT2003]
Length = 329
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ +QG ++ + R + D +R G +GQV + R+DD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAQQGWRVRVAVR-HPNDAMFVRTYGVVGQVEPVFCNIRDDD 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R + ++ V+N +G ++ E AR+AR++ E GV + + ISA+ AD
Sbjct: 63 SVRAVMIGADAVVNSVGILAESRKQGFDALQHEGAARIARIAAERGVAQLVQISAIGADE 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ S + RTK GE+ V FP A I RPS ++G D+F + M R V
Sbjct: 123 DSR-------SDYGRTKGLGERAVRDAFPSAVILRPSIVFGHEDEFFNRFAAMTR-VSPF 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
L V G T+ QPVYV D+A A A G IY+ GP+ +L+
Sbjct: 175 LPVV--GANTLFQPVYVDDIARAAEMALLGHAEPG-IYELGGPETLTFRQLM 223
>gi|300115234|ref|YP_003761809.1| NAD-dependent epimerase/dehydratase [Nitrosococcus watsonii C-113]
gi|299541171|gb|ADJ29488.1| NAD-dependent epimerase/dehydratase [Nitrosococcus watsonii C-113]
Length = 323
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 18/250 (7%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
N + G +G++G +L L +QG ++ + R ++ RDL + L + +
Sbjct: 1 MNIQTVCILGGTGFVGRWLSAHLVEQGYKVRVLTR-HWQRHRDLLV---LPGLRLKETDV 56
Query: 76 RNDDEIRKAIKYSNVVINLIG---REFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
+ ++ K VINLIG + + ++P ++A+ + +++ +H+
Sbjct: 57 HDPAQLAAQFKGCQSVINLIGILNEKRYNDGHGFRQVHADLPEKVAQACLDADIKRLLHM 116
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVL---REFPEATIFRPSDMYGSGDKFLRYY 189
SALNAD N G S + R+K +GE VL ++ E TIF+PS ++G GD F +
Sbjct: 117 SALNADAN------QGASYYLRSKGEGENRVLALAKQGLEVTIFQPSVIFGPGDSFFNRF 170
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
G + + E PVYVGDVA A D + + Y+ GPK Y L +
Sbjct: 171 GTLLK--LSPFIFPLACPEARFAPVYVGDVARAFARTLADKEDFSQRYELCGPKIYTLKQ 228
Query: 250 LLDWFHVVMK 259
L+++ V++
Sbjct: 229 LVEYTAQVLE 238
>gi|313125418|ref|YP_004035682.1| nucleoside-diphosphate sugar epimerase [Halogeometricum borinquense
DSM 11551]
gi|448286985|ref|ZP_21478201.1| nucleoside-diphosphate sugar epimerase [Halogeometricum borinquense
DSM 11551]
gi|312291783|gb|ADQ66243.1| predicted nucleoside-diphosphate sugar epimerase [Halogeometricum
borinquense DSM 11551]
gi|445572731|gb|ELY27261.1| nucleoside-diphosphate sugar epimerase [Halogeometricum borinquense
DSM 11551]
Length = 300
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 123/289 (42%), Gaps = 53/289 (18%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++G+ LC +L ++G ++ R D + +G V D I+
Sbjct: 5 VVGGSGFVGTNLCRELKERGHEVTALSRSPSSDELPKGVNKTMGNVTVY-------DSIK 57
Query: 83 KAIKYSNVVINLI----------GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
A + + V NL+ G E K NV R +++ V++F+ +
Sbjct: 58 DAFEGMDAVYNLVALSPLFKPSGGNEMHDKVHRHGTENV------VRAAEKHEVDRFVQM 111
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
SAL ADP+ PT YI R K + E+ V + TIFRPS ++G G +F+ + +
Sbjct: 112 SALGADPDGPTAYI-------RAKGEAEQIVTESVLDWTIFRPSVIFGDGGEFVSFTKLL 164
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
L G +T QP+YV DV + A +D G+ Y+ GP + L+E+
Sbjct: 165 APPYVSALP---GGGKTRFQPLYVDDVVGMMADAIEDDAHIGERYEIGGPDKLTLAEIAK 221
Query: 253 WFHVVMKKGEPDYGYYRYDLRYDPVMPLK-------LFINGLFPGYPMG 294
H + + R ++P+ L I G PG PMG
Sbjct: 222 MIH-------------KSNGRSTTIVPIPMGLAKVGLTIGGAIPGVPMG 257
>gi|16127834|ref|NP_422398.1| NADH-ubiquinone oxidoreductase [Caulobacter crescentus CB15]
gi|221236654|ref|YP_002519091.1| NADH-ubiquinone oxidoreductase subunit [Caulobacter crescentus
NA1000]
gi|13425350|gb|AAK25566.1| NADH-ubiquinone oxidoreductase 39 kDa subunit precursor, putative
[Caulobacter crescentus CB15]
gi|220965827|gb|ACL97183.1| NADH-ubiquinone oxidoreductase subunit [Caulobacter crescentus
NA1000]
Length = 319
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 10/205 (4%)
Query: 59 LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLA 118
+R+ GD+GQ+ + RN + +A+ + +NL+G F + + +A
Sbjct: 42 MRMLGDVGQIEVVQANVRNPSSVARALDGAEGCVNLVGVLFESGRQKFLSVHTMGARNVA 101
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
+ + GV+ +H+SA+ AD N P Y R+K +GE V FP ATI RPS +
Sbjct: 102 EAAAKAGVKHLVHVSAIGADVNSPAKY-------ARSKGEGEAAVREAFPGATIVRPSIV 154
Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
+G D F + M A+ G +T QPV+VGDVAA I A P AAG Y+
Sbjct: 155 FGPEDDFFNRFAQM---AALAPALPLVGGDTRFQPVFVGDVAAVIAKAVASPAAAGVTYE 211
Query: 239 AVGPKRYLLSELLDWFHVVMKKGEP 263
GP Y + E+L+ V + P
Sbjct: 212 LGGPTVYTMREILELILVETGRNRP 236
>gi|84686090|ref|ZP_01013986.1| NADH-ubiquinone oxidoreductase [Maritimibacter alkaliphilus
HTCC2654]
gi|84666183|gb|EAQ12657.1| NADH-ubiquinone oxidoreductase [Rhodobacterales bacterium HTCC2654]
Length = 322
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 118/240 (49%), Gaps = 13/240 (5%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T++G SG+ G Y+ ++ K G ++ + R + ++ G +GQV + R+D+ +
Sbjct: 2 TIYGGSGFAGRYIARRMAKAGWRVRVAVR-RPNEAIFVKPYGTVGQVAPILCNIRDDNSV 60
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ ++ V+N +G E R+ARL+ E G+ +H+SA+ AD
Sbjct: 61 AEAMTGADAVVNCVGTFDKGGKNNFGAVQDEGATRIARLAAEKGIGTLVHLSAIGAD--- 117
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
G S + ++K +GE +L FP A I RPS M+G D F + M R
Sbjct: 118 ----TEGDSLYAQSKGRGEAGILEHFPNAVILRPSVMFGPEDNFFNRFAGMTRM---GPV 170
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL-DWFHVVMKK 260
+ G +T QPV+V DVAAA A K +AA IY+ GP EL+ D V+ ++
Sbjct: 171 LPIVGGQTRFQPVFVDDVAAAAEKAVKG-EAAPGIYELGGPDVQTFRELMQDMLTVIQRR 229
>gi|406892551|gb|EKD37866.1| hypothetical protein ACD_75C00963G0001 [uncultured bacterium]
Length = 402
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 84 AIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
A+K + INLIG REF + T +VE + +K GV + + +SAL N
Sbjct: 166 AVKGCDATINLIGIIREFPGRGITFQRLHVEATRNIIAAAKNNGVTRHLQMSALGTRANS 225
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
Y +++K++ E+ V + TIFRPS ++G D F+ + R + +
Sbjct: 226 EARY-------FKSKFEAEEAVRASGLDYTIFRPSIIFGPKDDFINQLAGLLR-MLPAMP 277
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
V GE + QP+ DVA A + P+A G+ ++ GP R +ELLD VM KG
Sbjct: 278 VIGDGEYQL-QPISADDVARCFAEALEKPEAIGETFELCGPDRLSYNELLDTIARVMGKG 336
Query: 262 EPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERV 301
L+ +PL + LF +P +T +++
Sbjct: 337 RV--------LKIKNPLPLMRLVVPLFESFPFFPVTSDQI 368
>gi|269958307|ref|YP_003328094.1| epimerase [Anaplasma centrale str. Israel]
gi|269848136|gb|ACZ48780.1| putative epimerase [Anaplasma centrale str. Israel]
Length = 326
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 118/242 (48%), Gaps = 14/242 (5%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
VFG SG++G ++ + L +G + + R R L+L G+LGQV P N I
Sbjct: 14 VVFGGSGFIGRHVVSSLVLRGYTVSVFTRHPEKAAR-LKLIGNLGQVQIVPGDLSNALLI 72
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
K + +V++NL+G + + + +V +P +A+ + + G + +H S +++D
Sbjct: 73 EKLLAECDVIVNLVG-SMSPRRDVLRYLHVTVPGNIAKFAGQHG-KMLVHFSTMSSDVAS 130
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
++Y + +K +GE V +A I +P+ ++G D F + + R V L
Sbjct: 131 SSFYAT-------SKLEGENTVRSVCKDAVIVKPNLVFGDEDHFFSKFAKLAR-VLPFLP 182
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
V ++ QPVYVG+V A + +A + GK + GPK Y + EL+ + +
Sbjct: 183 VVCG--NSMVQPVYVGEV-AELTSAIVEGQETGKTLEVCGPKTYSMRELMQFILQTTARD 239
Query: 262 EP 263
+P
Sbjct: 240 KP 241
>gi|448533675|ref|ZP_21621463.1| NAD-dependent epimerase/dehydratase [Halorubrum hochstenium ATCC
700873]
gi|445705506|gb|ELZ57401.1| NAD-dependent epimerase/dehydratase [Halorubrum hochstenium ATCC
700873]
Length = 298
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEI 81
V G +G++GSYLC L + G + R + + GD+ + I
Sbjct: 5 VAGGTGFIGSYLCRALAEDGHAVTALSRSPEETPEGVTGVSGDV----------TDHGSI 54
Query: 82 RKAIKYSNVVINLIGR----EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
A++ + V+NL+ E N + L R +++ GVE+F+ +SAL A
Sbjct: 55 ESAVEGHDAVVNLVALSPLFEPEGGNRMHDRIHRGGTENLVRAAEDGGVERFVQLSALGA 114
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DPN T YI R K + E V + IFRPS ++G G +F+ + +
Sbjct: 115 DPNGDTAYI-------RAKGEAEAIVRESDLDWAIFRPSVVFGEGGEFVSFTKRLKGMFA 167
Query: 198 RKLAVY--KKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ +Y G +T QP++V D+ I AA + + AG+ Y+ GP+ L ++ D +
Sbjct: 168 PGVPLYPLPGGGKTRFQPIHVEDLVPMIAAAVTEEEHAGETYEIGGPEVLTLRQVTDLVY 227
Query: 256 VVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMG 294
+K G L P+ + L + G PG+PMG
Sbjct: 228 EAERK-----GVTILPLPM-PLAKIGLSVLGAVPGFPMG 260
>gi|82703565|ref|YP_413131.1| NAD-dependent epimerase/dehydratase [Nitrosospira multiformis ATCC
25196]
gi|82411630|gb|ABB75739.1| NAD-dependent epimerase/dehydratase [Nitrosospira multiformis ATCC
25196]
Length = 312
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 19/232 (8%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+FG SG++G +L N L + + IP R N+ ++L + Y R+ D +
Sbjct: 7 CIFGGSGFVGKHLANLLTNREIYLRIPTR-NYERAKELLEIPTTDLIEADIYDDRDLDRL 65
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
I + VINL+G +VE+P ++ K G+ + +H+SAL A P
Sbjct: 66 LLGI---DAVINLVG----VLQGDFHAVHVELPQKIIAACKRNGITRILHMSALKAGPGQ 118
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P S++ R+K +GE+ V +AT+FRPS ++G GD + + + R LA
Sbjct: 119 P-------SEYLRSKGEGEQIVRTSGMDATVFRPSVIFGPGDSSINLFARLGRLPVLPLA 171
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
QP++V DV A + +P G+ Y GPK Y L EL+++
Sbjct: 172 ----SPHAKFQPIFVMDVVQAFALSLDEPRTFGRSYDLCGPKCYSLRELVEY 219
>gi|56417303|ref|YP_154377.1| hypothetical protein AM1337 [Anaplasma marginale str. St. Maries]
gi|56388535|gb|AAV87122.1| hypothetical protein AM1337 [Anaplasma marginale str. St. Maries]
Length = 326
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 118/242 (48%), Gaps = 14/242 (5%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
VFG SG++G ++ + L +G + + R R L+L G+LGQV P N I
Sbjct: 14 VVFGGSGFIGRHVVSSLVLRGYTVSVFTRHPEKAAR-LKLIGNLGQVQIVPGDLSNALLI 72
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
K + +V++NL+G + + + +V +P +A+ + + G + +H S +++D
Sbjct: 73 EKLLAECDVIVNLVG-SMSPRRDVLRYLHVTVPGNIAKFAGQHG-KMLVHFSTMSSDVAS 130
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
++Y + +K +GE V +A I +P+ ++G D F + + R V L
Sbjct: 131 SSFYAT-------SKLEGENTVRSVCKDAVIVKPNLVFGDEDHFFSKFAKLAR-VLPFLP 182
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
V ++ QPVYVG+V A + +A + GK + GPK Y + EL+ + +
Sbjct: 183 VVCG--NSMVQPVYVGEV-AELTSAIVEGQETGKTLEVCGPKTYSMRELMQFILQTTARD 239
Query: 262 EP 263
+P
Sbjct: 240 KP 241
>gi|393774596|ref|ZP_10362957.1| NADH dehydrogenase [Novosphingobium sp. Rr 2-17]
gi|392719929|gb|EIZ77433.1| NADH dehydrogenase [Novosphingobium sp. Rr 2-17]
Length = 322
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 131/279 (46%), Gaps = 37/279 (13%)
Query: 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG--NFYDVRDLRLCGDLGQVLFQPYHP 75
G + TV G SGY+G +L +L +G+++ + R Y VR L G+LGQV F
Sbjct: 11 GKIVTVLGGSGYVGRHLAQELLARGARLRVASRQPQKAYMVRAL---GNLGQVQFAKVDV 67
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ A+ S+ V+NL+G FA + E R+A +K G +H+SAL
Sbjct: 68 TKPASLAAALAGSDAVVNLVG-AFAGN---LDAVQGEGAGRIAAAAKAAGAAALVHVSAL 123
Query: 136 NADPNPPTYYISGGSQ--FYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A S GS + RTK +GE VL FP ATI RPS M+G D + +G +
Sbjct: 124 GA---------SAGSDIAYARTKAEGEDAVLAAFPSATIVRPSLMFGPDDNLVMMFGDL- 173
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLD 252
+ R A+ + QP++V D A AI A DP + GK ++ GP+ + EL
Sbjct: 174 --ISRLPAMPVFAPDAKLQPLFVDDAAQAIAHALTDPASFGGKTFELAGPEVLTMLELNQ 231
Query: 253 WFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGY 291
+ + +G R P++ L ++GL G+
Sbjct: 232 --RIALAQG-----------RSRPLIALPDTVSGLIAGF 257
>gi|197119922|ref|YP_002140349.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter bemidjiensis Bem]
gi|197089282|gb|ACH40553.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter bemidjiensis Bem]
Length = 295
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 84 AIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
A+K + INLIG REF + T +VE + +K GV + + +SAL N
Sbjct: 59 AVKGCDATINLIGIIREFPGRGITFQRLHVEATRNIIAAAKNNGVTRHLQMSALGTRANS 118
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
Y +++K++ E+ V + TIFRPS ++G D F+ + R + +
Sbjct: 119 EARY-------FKSKFEAEEAVRASGLDYTIFRPSIIFGPKDDFINQLAGLLR-MLPAMP 170
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
V GE + QP+ DVA A + P+A G+ ++ GP R +ELLD VM KG
Sbjct: 171 VIGDGEYQL-QPISADDVARCFAEALEKPEAIGETFELCGPDRLSYNELLDTIARVMGKG 229
Query: 262 EPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERV 301
L+ +PL + LF +P +T +++
Sbjct: 230 RV--------LKIKNPLPLMRLVVPLFESFPFFPVTSDQI 261
>gi|344199924|ref|YP_004784250.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrivorans
SS3]
gi|343775368|gb|AEM47924.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrivorans
SS3]
Length = 348
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 46/269 (17%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G SG++G +L +L + G + I R + +L + + V + P +
Sbjct: 8 ILGGSGFVGRHLAERLSQGGHSVRILTRNRERNRENLLVLPGVEVVEADVHDP---IALE 64
Query: 83 KAIKYSNVVINLIG--------REF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
K ++ NVVINL+G RE ++ ++E+P +A +G+ + +H+
Sbjct: 65 KQLEGCNVVINLVGILNENKPGREDYPPERHGDFEKNHIELPRLVANTCGHLGIPRLLHM 124
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPE----------------------- 169
SAL A+P P+ Y+ R+K GE E++R+ E
Sbjct: 125 SALGANPIGPSAYL-------RSKGIGE-EIIRQSGENSAEMGHFNYLTGPKLLWGRGLK 176
Query: 170 ATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229
T FRPS ++G GD+F + + R + + G QPV+V DV +A V + D
Sbjct: 177 VTSFRPSVIFGEGDRFFNRFAQLLRSI--PFFIPMAGTNAKMQPVWVEDVVSAYVQSIDD 234
Query: 230 PDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
GK Y GPK Y L EL+ + ++
Sbjct: 235 EKTYGKAYDLCGPKVYTLGELMAYTQSLI 263
>gi|91776612|ref|YP_546368.1| NAD-dependent epimerase/dehydratase [Methylobacillus flagellatus
KT]
gi|91710599|gb|ABE50527.1| NAD-dependent epimerase/dehydratase [Methylobacillus flagellatus
KT]
Length = 321
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 18/241 (7%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++GS L ++L G + + R + L L L V N+ +
Sbjct: 9 VVGGSGFVGSALVHRLSTAGYDVKVLTRRR-ESSKHLIL---LPNVQVTECDVFNEASLS 64
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ + VINL G + N T +V++ R+A + + GV + +H+SAL A +
Sbjct: 65 GQLHGQDAVINLAGILHESGNATFESIHVDLATRIADICCKQGVPRLLHMSALKASADAK 124
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPE--ATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
+ Y+ R+K GE+ VLR E T+FRPS ++G GD FL M +V +
Sbjct: 125 SAYL-------RSKAAGEQAVLRRADELQVTVFRPSVIFGRGDHFL----SMLANVVNMM 173
Query: 201 AVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
V + K QP++V DVA + A ++ G+ GP+ Y L +L++ +++
Sbjct: 174 PVVAVAKPNAKFQPIWVEDVAYVFLTALENVSTYGRSIDLGGPQVYTLKQLIELTALLLG 233
Query: 260 K 260
K
Sbjct: 234 K 234
>gi|338737370|ref|YP_004674332.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [Hyphomicrobium
sp. MC1]
gi|337757933|emb|CCB63756.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Hyphomicrobium sp. MC1]
Length = 324
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 117/236 (49%), Gaps = 12/236 (5%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-LRLCGDLGQVLFQPYHP 75
NG +ATVFG SG++G ++ L ++G ++ R D+ L+ G +GQ+ +
Sbjct: 4 NGKLATVFGGSGFVGRHIVWSLARKGYRVRAAVRRP--DLAGYLQPMGVVGQIFPVQANL 61
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R D + +A++ ++VVIN +G T + +VE AR+A+ +K G E+ +HISA+
Sbjct: 62 RFADSVARAVEGADVVINAVGILAPTGAQSFDAIHVEGAARIAKAAKAAGAERLVHISAI 121
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD P Y +TK GE+ + FP A + RPS ++G D+F + M R
Sbjct: 122 GADKTSPAKYA-------QTKALGEEAMFAGFPGALVLRPSIVFGQEDEFFNRFAAMAR- 173
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
G T QPV+VGDV A AA G Y+ GP+ ELL
Sbjct: 174 -VSPFLPLIGGGVTKFQPVFVGDVGHAAAAAATGAGTPGTTYELGGPQVSTFKELL 228
>gi|386811440|ref|ZP_10098666.1| NAD-dependent epimerase/dehydratase [planctomycete KSU-1]
gi|386406164|dbj|GAB61547.1| NAD-dependent epimerase/dehydratase [planctomycete KSU-1]
Length = 299
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 23/241 (9%)
Query: 30 MGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD---------- 79
M L G G Q++ N Y VR L G ++ Y +N D
Sbjct: 1 MKILLTGSTGFVGKQLLHDLIDNDYQVRCLVRQGSENKI--TNYKDKNIDIVYGDTTDAR 58
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ +K + VINL+G REF K T + E A L ++ G+ +FIH+SAL A
Sbjct: 59 SLDDTLKGCDAVINLVGIIREFPGKGVTFERLHYEGTANLVTAARTQGIRRFIHMSALGA 118
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
P G +Q+ +TK++ E+ V + TIFRPS ++G GDKF+ + +M +
Sbjct: 119 RPQ-------GKTQYQQTKFRAEEFVRDSGLDYTIFRPSIIFGPGDKFVNLFANMLKTQ- 170
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
+ + V G+ + QPV + +V++ V + +A GK ++ GP++ +L+D V
Sbjct: 171 QFVPVVGNGKYKM-QPVALENVSSGFVKSIGQKNAIGKTFEIGGPEKMEFDKLIDIIGEV 229
Query: 258 M 258
+
Sbjct: 230 L 230
>gi|444921160|ref|ZP_21240998.1| Hypothetical protein F387_00800 [Wohlfahrtiimonas chitiniclastica
SH04]
gi|444507896|gb|ELV08070.1| Hypothetical protein F387_00800 [Wohlfahrtiimonas chitiniclastica
SH04]
Length = 317
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 123/257 (47%), Gaps = 43/257 (16%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SGY+G ++ ++L + + II + + D R V F+ Y P+ D EI
Sbjct: 6 VLGGSGYVGYHVISRLARDKNNHIIAFSRSKNVQEDTR---QFSFVKFKTY-PQTDAEIL 61
Query: 83 KAIKYSNVVINLIG-----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
I ++V+INL+G R+ ATK A+V++ R A L+K+ ++ FIH+SAL
Sbjct: 62 YHIHDADVIINLVGTMDGNRKRATK------AHVDLVKRYAELAKQTSIKHFIHMSALGV 115
Query: 138 DPNPPTYYISGGSQFYRTKYQGE---KEVLREF-PEATIFRPSDMYG----SGDKFLRYY 189
GGS ++ TK+QGE KE L + +I RPS M+G S D +R
Sbjct: 116 SEK-------GGSVYFDTKWQGEVALKEALNNSGIKVSILRPSFMFGQRAPSLDGLVR-- 166
Query: 190 GHMWRHVFRKLAVYK-KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY--- 245
+ K ++ G T QP+YVGDV AI Y VGP+R
Sbjct: 167 ------LIDKFPMFMVPGAFTQFQPIYVGDVTRAIEQIMCTQSEMQATYTLVGPERMTFL 220
Query: 246 -LLSELLDWFHVVMKKG 261
++ ++L + H+ KK
Sbjct: 221 EMIRDVLRYSHLCRKKA 237
>gi|254477815|ref|ZP_05091201.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ruegeria sp. R11]
gi|214032058|gb|EEB72893.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ruegeria sp. R11]
Length = 329
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 122/240 (50%), Gaps = 16/240 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K+G ++ + R + ++ G GQV + RND
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMFVKPYGVPGQVEPVLCNIRNDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ ++ ++ V+N +G T E R+AR++ E G+ +H+SA+ AD
Sbjct: 63 SVAAVMQGADAVVNCVGILNEVGKNTFDAVQTEGAERIARIAAEQGITNMVHVSAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ G S++ RTK GE V + P A I RPS ++G+ D+F + M R +
Sbjct: 123 D-------GASEYARTKAAGETAVQKHQPNAVILRPSIIFGAEDQFFNRFAGMTR-LSPL 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR----YLLSELLDWFH 255
L + +T QPVYV DVA A VAA AAG +Y+ GP+ L+ ++LD +
Sbjct: 175 LPIAHA--DTKFQPVYVDDVAKAAVAALTGKAAAG-VYELGGPEVKSFGALMQQMLDVIN 231
>gi|407778085|ref|ZP_11125351.1| NAD-dependent epimerase/dehydratase [Nitratireductor pacificus
pht-3B]
gi|407300117|gb|EKF19243.1| NAD-dependent epimerase/dehydratase [Nitratireductor pacificus
pht-3B]
Length = 324
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 19/242 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G +L L ++G ++ + R N L+ G++GQV + RN
Sbjct: 10 LVTIFGGSGFVGRHLVQALTRRGYRVRVACR-NPNLAMHLQPLGNVGQVHAVQANLRNRA 68
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ +A++ ++ V+NL+G E + F DA + AR + SA+ A
Sbjct: 69 SVDRAVEGADHVVNLVGILHESGRQTF---DAVQDFGARAVAEAARAAGAGLTQGSAIGA 125
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D + S + RTK GE+ L +A I RPS ++G D+F + +M R F
Sbjct: 126 DADSV-------SDYARTKALGEQAALETVKDAVIIRPSIIFGPEDQFFNRFANMAR--F 176
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDW 253
G ET QPVYVGDVA + GK+Y+ GP+ R + ++L+
Sbjct: 177 SPFLPLIGGGETRFQPVYVGDVAEVYARSVDGTLKGGKVYELGGPEVLTFRECMEQMLEV 236
Query: 254 FH 255
H
Sbjct: 237 IH 238
>gi|254467435|ref|ZP_05080845.1| NAD-dependent epimerase/dehydratase [Rhodobacterales bacterium Y4I]
gi|206684436|gb|EDZ44919.1| NAD-dependent epimerase/dehydratase [Rhodobacterales bacterium Y4I]
Length = 300
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 35/246 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQI---------IIPYRGNFYDVRDLRLCG-DLGQVLFQP 72
V G +G++G + +L +G + YR ++ R +RL G DL +
Sbjct: 10 VLGGTGFLGQRVVRRLQDRGCPVSAGTRFPEAAASYRSSWD--RGVRLVGMDLADL---- 63
Query: 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
D + +A++ ++ V+N IG T+ + D + E R+ARL+++ GV++ +HI
Sbjct: 64 ------DTLARALEGASAVVNCIGFYAETRQQSFQDVHAEGARRIARLARDGGVQRLVHI 117
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
S + A P+ Y+ R + +GE V FP A I RPS M+ F +G +
Sbjct: 118 SGIGASLQSPSAYV-------RARAEGEAAVRSVFPGAVILRPSVMFSRSGAF---FGDL 167
Query: 193 WRHVFR--KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ V R + ++ G + QPV+ GDVA A+ A K+++ GP + ++
Sbjct: 168 QKIVDRLPVIPLFGNGRTRL-QPVWAGDVAEAVCRLLDGARAPRKVFELGGPDVFTYRQI 226
Query: 251 LDWFHV 256
L V
Sbjct: 227 LRRLAV 232
>gi|399019146|ref|ZP_10721295.1| putative nucleoside-diphosphate sugar epimerase [Herbaspirillum sp.
CF444]
gi|398098293|gb|EJL88580.1| putative nucleoside-diphosphate sugar epimerase [Herbaspirillum sp.
CF444]
Length = 322
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 23/240 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G SG++GS + +L + S++++P R + + L + + V+ + D +
Sbjct: 8 VIGGSGFIGSQVVAQLARTTASRVVVPTR-RYERSKHLLVMPTVRTVIADVHDETALDAL 66
Query: 82 RKAIKYSNVVINLIGREFATKNF-------TIADANVEIPARLARLSKEMGVEKFIHISA 134
I + V+NL+G + A+V++P ++ K GV +++H+SA
Sbjct: 67 FDGI---DAVVNLVGILHSRSGPGGSAYGPDFLQAHVDLPRKIVAACKRHGVRRYLHMSA 123
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEAT-IFRPSDMYGSGDKFLRYYGHMW 193
L A P+ Y+ R+K GE + AT +FRPS ++G D+FL + +
Sbjct: 124 LGASAQGPSMYL-------RSKAAGEAAAFADSDIATTVFRPSVVFGEADRFLNMFAALQ 176
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ R + G + QPVYVGDVA A VAA + +GK Y+ GPK Y L +L+
Sbjct: 177 K---RFPLMPLGGADAKFQPVYVGDVAQAFVAALQHESTSGKTYELAGPKIYTLRQLVQL 233
>gi|92115815|ref|YP_575544.1| NAD-dependent epimerase/dehydratase [Nitrobacter hamburgensis X14]
gi|91798709|gb|ABE61084.1| NAD-dependent epimerase/dehydratase [Nitrobacter hamburgensis X14]
Length = 322
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 117/249 (46%), Gaps = 15/249 (6%)
Query: 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY 73
+S + TVFG SG++G ++ L K+ +I + R L+ G +GQ+
Sbjct: 2 ASNTDTLVTVFGGSGFLGRHVVRALAKRDYRIRVGVRRPEL-AGHLQPLGKVGQIHAVQA 60
Query: 74 HPRNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIH 131
+ R +R A++ S+V INL+G + + F DA V A + + +H
Sbjct: 61 NLRYPASVRAAMRDSHVAINLVGILSKSGAQTF---DAVVAEGAATVAKAAAATGARMVH 117
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGH 191
+SA+ AD + Y R K GEK VL P ATI RPS ++GS D+F +
Sbjct: 118 VSAIGADDKSASAY-------ARAKAAGEKAVLAAVPSATILRPSVVFGSEDQFANRFAA 170
Query: 192 MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ + + G T QPVYVGDVA A+ A AG +Y+ GP+ + E++
Sbjct: 171 L--ALMSPVLPLIGGGATKLQPVYVGDVATAVADAVDGRTKAGAVYELGGPEVLSMREII 228
Query: 252 DWFHVVMKK 260
V+++
Sbjct: 229 QIILRVIER 237
>gi|448350869|ref|ZP_21539680.1| NAD-dependent epimerase/dehydratase [Natrialba taiwanensis DSM
12281]
gi|445635741|gb|ELY88908.1| NAD-dependent epimerase/dehydratase [Natrialba taiwanensis DSM
12281]
Length = 309
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRG-NFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++G++LC +L ++G ++ R D +L DL Y D I
Sbjct: 5 VAGGTGFIGTHLCTELAERGHEVTALSRNPTAEDADELPDEVDLSTGDVSAY-----DSI 59
Query: 82 RKAIKYSNVVINLIGRE------FATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
A+ + ++NL+ T + T+ E L R ++E GV++F+ ISAL
Sbjct: 60 VDAVAGHDAIVNLVALSPLYQPPGGTDHETVHLGGTE---NLVRAAEEHGVDRFLQISAL 116
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
+ADP+ PT YI RTK + E V TI RP+ ++G G +FL + +
Sbjct: 117 SADPDGPTAYI-------RTKGRAESIVREAALSWTIVRPAVVFGDGGEFLSFAKRLTTP 169
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
L G +T QP++VGD A + A D G+ Y+ GP+ L++
Sbjct: 170 YLTGL---PGGGKTRFQPIWVGDFAPLLADALVDDFHVGRTYELGGPQVVTLAD 220
>gi|414164521|ref|ZP_11420768.1| hypothetical protein HMPREF9697_02669 [Afipia felis ATCC 53690]
gi|410882301|gb|EKS30141.1| hypothetical protein HMPREF9697_02669 [Afipia felis ATCC 53690]
Length = 321
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 16/243 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ L ++ ++ + R L+ G +GQ+ + R
Sbjct: 8 LVTVFGGSGFLGRHVVRALAQRDYRLRVGVRRPEL-AGHLQPLGKVGQINPVQANVRYPA 66
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A++ S VV+NL+G E + F +A AR + + +H+SA+ A
Sbjct: 67 SLDAAMRGSRVVVNLVGILSEGGAQRF---NAVQAEGARAIAEAAARIGARVVHVSAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
+ N S++ +K GE+ VL P+ATI RPS ++G D F + + R +F
Sbjct: 124 NAN-------SASRYATSKALGEQAVLEATPDATIIRPSIVFGPEDHFTNRFAALAR-LF 175
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
L + G +T QPVYVGDVA+AI A AG Y+ GP+ + E ++ V
Sbjct: 176 PALPLI--GADTKLQPVYVGDVASAIADAVDGKTKAGATYELGGPEVMTMREAIELILRV 233
Query: 258 MKK 260
++
Sbjct: 234 AER 236
>gi|378828485|ref|YP_005191217.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii HH103]
gi|365181537|emb|CCE98392.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii HH103]
Length = 326
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G ++ L K+G +I + R L+ G +GQ+ F + R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVRRPDL-AGHLQPLGTMGQISFVQANLRYRK 67
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +A++ ++ VIN +G F + T DA + AR + HISA+ A+
Sbjct: 68 SVDRAVEGADHVINCVGVLFESGRNTF-DAVQDFGARAVAEAARAAGATLTHISAIGANT 126
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
S + RTK + E +L PEA I RPS ++G D F + M R F
Sbjct: 127 Q-------SASSYARTKGRAEIAILETVPEAVILRPSIIFGPEDDFFNKFASMAR--FAP 177
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
G +T QPVYV DVA A+ A G IY+ G + E L+
Sbjct: 178 ALPLIGGGQTKFQPVYVTDVAEAVARAVDGKLKGGTIYELGGAQILSFRECLE 230
>gi|383756349|ref|YP_005435334.1| NADH-ubiquinone oxidoreductase [Rubrivivax gelatinosus IL144]
gi|381377018|dbj|BAL93835.1| NADH-ubiquinone oxidoreductase, putative [Rubrivivax gelatinosus
IL144]
Length = 318
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 21/234 (8%)
Query: 23 VFGASGYMGSYLCNKL----GKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G L +L G G ++I+P R LR L V ++
Sbjct: 6 VLGGTGFVGRSLVERLVERNGGGGGRVIVPTR-RISHGTALR---SLPTVELVEADVHDE 61
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + + ++ VINLI ++ +VE+P RLA + G + +H+SAL
Sbjct: 62 RTLARLVGQADAVINLIAVLHGSRA-QFQRVHVELPRRLAHVCAAAGGRRVVHVSALGVG 120
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV-F 197
P+ Y+ R+K +GE + TI RPS ++G+ D+ L + + F
Sbjct: 121 AGGPSNYL-------RSKTEGEAALQSPGVALTIVRPSLIFGTEDRVLNVFAELQAAAPF 173
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
L G + QPV++ DV AIV D G++Y+ GPK Y LSE++
Sbjct: 174 VPL----PGGDAKMQPVWIEDVTTAIVRCLDDNTTIGQVYELAGPKVYTLSEIV 223
>gi|83720938|ref|YP_440792.1| NADH-ubiquinone oxidoreductase [Burkholderia thailandensis E264]
gi|167579478|ref|ZP_02372352.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia
thailandensis TXDOH]
gi|167617575|ref|ZP_02386206.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia
thailandensis Bt4]
gi|257140557|ref|ZP_05588819.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia
thailandensis E264]
gi|83654763|gb|ABC38826.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia
thailandensis E264]
Length = 319
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 117/246 (47%), Gaps = 23/246 (9%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
G + G +G++GS L N L G+ + I R + L D+ V +
Sbjct: 1 MQGQTIAMLGGTGFIGSRLVNALVDAGAHVRIGARRRDHARHLATLPVDI--VELTAFDV 58
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADA----NVEIPARLARLSKEMGVEKFIH 131
R E+ + + ++ +NL+G + + +V +PA LA E V + +H
Sbjct: 59 R---ELARFVAGAHAAVNLVGVLHGGRGKRYGEGFERLHVALPAALAAACIEARVPRMLH 115
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP----EATIFRPSDMYGSGDKFLR 187
+SAL ADPN P+ Y+ R+K GE + + + T+FRPS ++G GD FL
Sbjct: 116 VSALGADPNAPSMYL-------RSKGDGEAALHAQAAAGVLDVTVFRPSIVFGPGDAFLN 168
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + R +F L + + + QP+YVGDVA AI AC G+ Y+ GP+ Y L
Sbjct: 169 TFARLQR-IFPVLPLAMP--DALMQPIYVGDVAQAIANACARDATRGRTYELGGPRTYRL 225
Query: 248 SELLDW 253
E++ +
Sbjct: 226 EEIVRY 231
>gi|88811003|ref|ZP_01126259.1| NAD-dependent epimerase/dehydratase [Nitrococcus mobilis Nb-231]
gi|88791542|gb|EAR22653.1| NAD-dependent epimerase/dehydratase [Nitrococcus mobilis Nb-231]
Length = 319
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 113/242 (46%), Gaps = 19/242 (7%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++G ++ L ++ + R N R L +L + Y + + +
Sbjct: 7 CVLGGTGFVGRHIAGHLANTRVRLRVLTR-NRERNRQLLPIPNLQLIEVAGY---DQERL 62
Query: 82 RKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ VINL+G E DA+V++P + + GV + +H+SAL A P
Sbjct: 63 TEQFAGCQAVINLVGVLNEGRGAGHRFEDAHVKLPEHVIAACRTAGVGRLLHMSALGAAP 122
Query: 140 NPPTYYISGGSQFYRTKYQGE---KEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
+ S++ +TK GE K E T+FRPS ++G GD FL + + +
Sbjct: 123 D-------AASRYQQTKAAGECVVKAAHSENLAVTVFRPSVIFGPGDSFLSRFAQLLQ-- 173
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
F + + +K PVYVGDVA A V + +D G+ Y+ GPK + L EL+D+
Sbjct: 174 FFPVLLLPTPRLRLK-PVYVGDVAKAFVQSLEDEATFGQCYELCGPKVFTLRELVDYVAT 232
Query: 257 VM 258
++
Sbjct: 233 LL 234
>gi|332527835|ref|ZP_08403873.1| nucleoside-diphosphate-sugar epimerase [Rubrivivax benzoatilyticus
JA2]
gi|332112230|gb|EGJ12206.1| nucleoside-diphosphate-sugar epimerase [Rubrivivax benzoatilyticus
JA2]
Length = 318
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 29/277 (10%)
Query: 23 VFGASGYMGSYLCNKL----GKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G L +L G G ++I+P R + V + L V + ++
Sbjct: 6 VLGGTGFVGRSLVERLVERNGGGGGRVIVPTRRLSHGV----VLRSLPTVELVEANVHDE 61
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + + ++ VINLI ++ +VE+P R+A G + +H+SAL
Sbjct: 62 RTLARLVAQADAVINLIAILHGSRE-QFQRVHVELPRRIAHACAAAGGRRVLHVSALGVG 120
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P+ Y+ R+K +GE + TI RPS ++G+ D+ L + + +
Sbjct: 121 AGGPSNYL-------RSKTEGEAALQSPGVALTIVRPSLIFGTEDRVLNVFAEL-----Q 168
Query: 199 KLA--VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
+A V G QPV++ DV AIV D G++Y+ GPK Y LSE++
Sbjct: 169 AMAPFVPLPGGGAKMQPVWIEDVTTAIVRCLDDKATIGQVYELAGPKVYTLSEIVRLAGR 228
Query: 257 VMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPM 293
P + D V L+ + + PG P+
Sbjct: 229 WSGHERPQFPL------PDAVGRLQALLMEMMPGTPL 259
>gi|398355965|ref|YP_006401429.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii USDA 257]
gi|390131291|gb|AFL54672.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii USDA 257]
Length = 326
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 105/233 (45%), Gaps = 11/233 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T+FG SG++G ++ L K+G +I + R L+ G +GQ+ F + R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVRRPDL-AGHLQPLGSMGQISFVQANLRYRK 67
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +A++ ++ VIN +G F + T DA + AR + HISA+ A+
Sbjct: 68 SVDRAVEGADHVINCVGVLFESGRNTF-DAVQDFGARAVAEAARAAGATLTHISAIGANT 126
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ Y RTK + E VL PEA I RPS ++G D F + M R F
Sbjct: 127 QSESSY-------ARTKGRAEIAVLETVPEAVILRPSIIFGPEDDFFNKFASMAR--FAP 177
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
G T QPVYV DVA A+ A G IY+ G + E L+
Sbjct: 178 ALPLIGGGRTKFQPVYVTDVAEAVARAVDGKLTGGTIYELGGAQVLSFRECLE 230
>gi|384917290|ref|ZP_10017418.1| Predicted nucleoside-diphosphate-sugar epimerase [Methylacidiphilum
fumariolicum SolV]
gi|384525323|emb|CCG93291.1| Predicted nucleoside-diphosphate-sugar epimerase [Methylacidiphilum
fumariolicum SolV]
Length = 365
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 24/236 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRG-----NFYDVRDLRLCGDLGQVLFQPYHPRN 77
V G +G++G + L + G ++ + R Y++ L GDL + F
Sbjct: 6 VTGGTGFIGKSVVKLLCQLGYKVRVSTRNLKQIKALYELPCEFLEGDLSDLSFA------ 59
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
RK + VI+L+G T +V+I + + SKE GV++F+H+SAL
Sbjct: 60 ----RKCSSGIDAVIHLVGIIVEQGQDTFKKVHVQITKNMIQASKENGVKRFLHMSALGT 115
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
PN S++++TK+ E+ V + TIF+PS ++G GD F + M
Sbjct: 116 RPN-------ARSRYHQTKWTAEELVRNSELDWTIFQPSVVFGIGDDFTKRLYKMLFFPN 168
Query: 198 RKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
L ++ G ++ QP++V +VA A V A +P+ K Y GP+ Y L E+L
Sbjct: 169 NPLLLFPLIDGGKSKLQPIFVENVAEAFVRAIPNPNTFHKTYTLAGPEVYSLKEIL 224
>gi|255019648|ref|ZP_05291727.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus caldus ATCC
51756]
gi|340783015|ref|YP_004749622.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus caldus SM-1]
gi|254970871|gb|EET28354.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus caldus ATCC
51756]
gi|340557166|gb|AEK58920.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus caldus SM-1]
Length = 346
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 113/257 (43%), Gaps = 30/257 (11%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G SG++G +L KL K+G + + R DL + L V + P + +
Sbjct: 6 AILGGSGFVGRHLAEKLCKEGHSVRVLTRRRERHREDLLVLPGLELVEADVFDPMS---L 62
Query: 82 RKAIKYSNVVINLIG--------REFA--TKNFTIADANVEIPARLARLSKEMGVEKFIH 131
++ +VV+NL+G R+ ++ ++E+P +A +GV + +H
Sbjct: 63 EGQLRDRDVVVNLVGILNEDRRGRQDLPPARHGDFERVHIELPRLVANTCGRLGVRRLLH 122
Query: 132 ISALNADPNPPTYYISG---GSQFYR------------TKYQGEKEVLREFPEATIFRPS 176
+SAL A P P+ Y+ G + R T G K + + T FRPS
Sbjct: 123 MSALGASPIAPSAYLRSKGLGEEIVRQAGEDSASLGHFTYLNGPKLLWGRGLKVTSFRPS 182
Query: 177 DMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI 236
++G GD F + + R V L + + QPV+V DV +A V A D G+
Sbjct: 183 VIFGEGDSFFNRFADLLRQV--PLVIPLAKAQARMQPVWVEDVVSAFVRALDDERTYGQA 240
Query: 237 YQAVGPKRYLLSELLDW 253
Y GP+ + L EL+ +
Sbjct: 241 YDLCGPEVFTLMELVRY 257
>gi|386334926|ref|YP_006031097.1| nadh-ubiquinone oxidoreductase protein [Ralstonia solanacearum
Po82]
gi|334197376|gb|AEG70561.1| nadh-ubiquinone oxidoreductase protein [Ralstonia solanacearum
Po82]
Length = 334
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 29/247 (11%)
Query: 23 VFGASGYMGSYLCNKL--------GKQGSQIIIPYR-GNFYDVRDLRLCGDLGQVLFQPY 73
V G +G++G+ L + L G ++I+P R +L L + + +
Sbjct: 8 VLGGTGFIGTRLLSCLVTETFATPGLPDGRVIVPTRDAESAQAHNLTLLPRVDVMEADVH 67
Query: 74 HPRNDDEIRKAIKYSN----VVINLIG--REFATKNFTIA--DANVEIPARLARLSKEMG 125
D + A+ VINL+G ++ + A A+V++P R+ + G
Sbjct: 68 ADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRRAHVDLPRRVVDACRRHG 127
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++ +H+SAL ADP +G S + R+K GE+ V + T+FRPS ++G D F
Sbjct: 128 VKRLLHMSALGADP-------AGPSMYQRSKGDGERVVTGSDLDWTVFRPSVVFGPDDHF 180
Query: 186 LRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L + M R F LA E QPVYV DVA A A +P ++Y VGP+
Sbjct: 181 LNLFARMQRLAPFVPLAC----AEARFQPVYVDDVATAFAHALDNPATFRRVYPLVGPRV 236
Query: 245 YLLSELL 251
Y L+EL+
Sbjct: 237 YTLAELV 243
>gi|418407824|ref|ZP_12981141.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Agrobacterium
tumefaciens 5A]
gi|358005810|gb|EHJ98135.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Agrobacterium
tumefaciens 5A]
Length = 326
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 107/225 (47%), Gaps = 23/225 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRMLAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFAQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISA 134
R D I KAI+ ++ V+N +G A DA E A+ +A ++ G HISA
Sbjct: 64 RYRDSIVKAIEDADHVVNCVG-ILAESGRNTFDAVQEFGAKAIAEAARNAGA-TLTHISA 121
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ AD N T Y RTK + E + P A I RPS ++G D F + M R
Sbjct: 122 IGADANSSTGY-------GRTKGRAEAAIHSVLPGAVILRPSIIFGPEDDFFNKFAKMAR 174
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
+ F L G +T QPVYV DVA A+ + G IY+
Sbjct: 175 SLPFLPLI---GGGKTKFQPVYVEDVAEAVARSVDGKLKPGAIYE 216
>gi|91762365|ref|ZP_01264330.1| probable NADH-ubiquinone oxireductase [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718167|gb|EAS84817.1| probable NADH-ubiquinone oxireductase [Candidatus Pelagibacter
ubique HTCC1002]
Length = 322
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 12/240 (5%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG SG +G +L KL K ++ + R ++ + G + + ++ +IR
Sbjct: 8 IFGGSGQIGRHLIRKLTKNNYKVTVVTRNLHQKGYAIKTQANAGYIDIVEANIFDEKKIR 67
Query: 83 KAIKYSNVVINLIGREFAT-KNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
K +++ INLIG + + K T + + P+ L++L KE V++FIH+SAL + P
Sbjct: 68 KLFSQTDICINLIGILYESGKGNTFKNIHSIFPSILSKLCKEYKVQQFIHLSALGINNAP 127
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
S++ ++K GE + + FP ATI RPS +Y D F + + +
Sbjct: 128 -------DSEYAKSKLNGELNIQKNFPLATILRPSVVYSVDDNFTTSFMTLLSRL-PFFP 179
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL-DWFHVVMKK 260
+Y G P++ D+ I + KI + VGP L E+L H++ KK
Sbjct: 180 LYYNGSTKF-APIHCSDLTDTIYHVVSK-NIYSKIIECVGPDILSLKEILKKLLHLIDKK 237
>gi|448430042|ref|ZP_21584738.1| NAD-dependent epimerase/dehydratase [Halorubrum tebenquichense DSM
14210]
gi|445689577|gb|ELZ41808.1| NAD-dependent epimerase/dehydratase [Halorubrum tebenquichense DSM
14210]
Length = 298
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 123/279 (44%), Gaps = 30/279 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEI 81
V G +G++GSYLC L + + R + + GD+ + I
Sbjct: 5 VAGGTGFIGSYLCGALAEDDHAVTALSRSPEETPEGVTGVSGDV----------TDYGSI 54
Query: 82 RKAIKYSNVVINLIGR----EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
A++ + V+NL+ E N + L R +++ GVE+F+ +SAL A
Sbjct: 55 ESAVEGHDAVVNLVALSPLFEPEGGNRMHDRIHRGGTENLVRAAEDGGVERFVQLSALGA 114
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DPN T YI R+K + E V + IFRPS ++G G +F+ + +
Sbjct: 115 DPNGDTAYI-------RSKGEAESIVRESDLDWAIFRPSVVFGEGGEFVSFTKRLKGMFA 167
Query: 198 RKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ +Y G +T QP++V D+ I AA D + G+ Y+ GP+ L ++ D +
Sbjct: 168 PGVPLYPLPGGGKTRFQPIHVEDLVPMIAAAVTDEEHVGETYEIGGPEVLTLRQVTDLVY 227
Query: 256 VVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMG 294
KK G L P+ + L + G PG+PMG
Sbjct: 228 EAEKK-----GVTILPLPM-PLAKIGLSVLGAVPGFPMG 260
>gi|149917511|ref|ZP_01906008.1| probable NADH-ubiquinone oxidoreductase [Plesiocystis pacifica
SIR-1]
gi|149821574|gb|EDM80972.1| probable NADH-ubiquinone oxidoreductase [Plesiocystis pacifica
SIR-1]
Length = 554
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 118/243 (48%), Gaps = 29/243 (11%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQVLFQ-PYHPRNDD 79
V G SG++G ++ + L QG ++++ RG +R L G +L +V F P+ +
Sbjct: 5 AVAGGSGFIGRHVVDHLRAQGCRVVVLARG----LRGLEGEGVELRRVDFAGPW----SE 56
Query: 80 EIRKAIKYSNVVINLIGREFATKN--FTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ + + V+NL+G + A + + A+VE+P LA ++ G+E+F+H+S A
Sbjct: 57 QGASLLAGCDAVVNLVGIKRAGRGSGLSFEAAHVELPKALAEAARREGIERFVHVSVAGA 116
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH-- 195
+P + Y+ TK +GE V FP ATI RP +YG GD LR R
Sbjct: 117 RRHPRSTYLD-------TKARGEAAVREGFPAATILRPGVVYGRGDDMLRNLADSVRAAP 169
Query: 196 VF----RKLAVYKKGEETIKQ--PVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
VF R + G T + PV V DVA A+ A + G++ VGP R L
Sbjct: 170 VFPAPRRPRSATGTGTGTWAELCPVAVEDVAEAVWRAVEG-RGQGQVLDVVGP-RTTLPR 227
Query: 250 LLD 252
L+D
Sbjct: 228 LVD 230
>gi|167568402|ref|ZP_02361276.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia oklahomensis
C6786]
Length = 319
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 118/246 (47%), Gaps = 23/246 (9%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
G V G +G++GS L N L G+ + I R + R L + + V +
Sbjct: 1 MQGQTIAVLGGTGFIGSRLVNALVGAGAHVRIAARHREH-ARHLAML-PVEIVELAAFDV 58
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADA----NVEIPARLARLSKEMGVEKFIH 131
R E+ + + ++ +NL+G + + +V +PA LA E V + +H
Sbjct: 59 R---ELARFVAGAHAAVNLVGVLHGGRGTPYGEGFERLHVALPAALAAACIEAHVPRVLH 115
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP----EATIFRPSDMYGSGDKFLR 187
+SAL ADP+ P+ Y+ R+K GE + + + T+FRPS ++G GD FL
Sbjct: 116 VSALGADPHAPSMYL-------RSKGDGEAALHAQAAAGVLDVTVFRPSIVFGPGDAFLN 168
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + R +F + + + + QP+YVGDVA AI AC GK Y+ GP+ Y L
Sbjct: 169 TFARLQR-IFPVVPLAMP--DALMQPIYVGDVAQAIANACARDATRGKTYELGGPRTYRL 225
Query: 248 SELLDW 253
EL+ +
Sbjct: 226 EELVRY 231
>gi|448458557|ref|ZP_21596223.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
gi|445809069|gb|EMA59116.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
Length = 298
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 128/284 (45%), Gaps = 40/284 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD--LRLCGDLGQVLFQPYHPRNDDE 80
V G +G++GSYLC L G ++ R + D + GD+ + D
Sbjct: 5 VAGGTGFIGSYLCRALADGGHEVTALSR-SVSDTPEGVASATGDV----------TDYDS 53
Query: 81 IRKAIKYSNVVINLIGRE--FATKNFTIADANVEIPA--RLARLSKEMGVEKFIHISALN 136
I A + + V+NL+ F K + + L R +++ G E+F+ +SAL
Sbjct: 54 IAGAAEGQDAVVNLVALSPLFEPKGGNVMHDRIHRKGTDNLVRAAEDGGAERFLQLSALG 113
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD + T YI R K + E+ V + TIFRPS ++G G +F+ + +
Sbjct: 114 ADADGDTAYI-------RAKGEAEEIVRESGLDWTIFRPSVVFGEGGEFVSFTKRLKGMF 166
Query: 197 FRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ +Y G +T QP++V D+ +VAA + + G+ Y+ GP+ L E+ D
Sbjct: 167 APGVPLYPLPGGGKTRFQPIHVEDLVPMLVAALEGDEHVGETYEVGGPEVLTLREVTDLV 226
Query: 255 HVVMKKGEPDYGYYRYDLRYDPV-MPLK---LFINGLFPGYPMG 294
+ +KG + P+ MPL L + G PG+PMG
Sbjct: 227 YEAEEKG----------VTIVPLPMPLARIGLSVLGAVPGFPMG 260
>gi|379006114|ref|YP_005255565.1| NAD-dependent epimerase/dehydratase [Sulfobacillus acidophilus DSM
10332]
gi|361052376|gb|AEW03893.1| NAD-dependent epimerase/dehydratase [Sulfobacillus acidophilus DSM
10332]
Length = 285
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 34/238 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR------LCGDLGQVLFQPYHPR 76
+ G +GY+G+ + ++G Q+ + R ++ + L G+L +L
Sbjct: 5 ILGGTGYVGAAIRAAYAQKGHQVTVVARHPAREISGVTVVSLDVLTGNLTGIL------- 57
Query: 77 NDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
+VV+N IG RE T +V + RL +GV + +HISA
Sbjct: 58 ---------SGMDVVVNAIGIIREQPQAGITFEAMHVTLVERLLEAIAAVGVSRLLHISA 108
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L P S++++TK++ E+ + + TIFRPS ++G F + R
Sbjct: 109 LGTRPG-------AVSRYHQTKWRAEERIRQANARWTIFRPSLVFGGRAPFFELLAQLTR 161
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+A +T+ QPVY D+A +V+ +D G+ Y+ GPKRY L+EL D
Sbjct: 162 ---LPIAPLPGSGQTLFQPVYRHDIARFLVSVTEDDTTVGQTYELGGPKRYTLTELYD 216
>gi|83746011|ref|ZP_00943067.1| NADH-ubiquinone oxidoreductase [Ralstonia solanacearum UW551]
gi|207741966|ref|YP_002258358.1| nadh-ubiquinone oxidoreductase protein [Ralstonia solanacearum
IPO1609]
gi|83727405|gb|EAP74527.1| NADH-ubiquinone oxidoreductase [Ralstonia solanacearum UW551]
gi|206593352|emb|CAQ60279.1| nadh-ubiquinone oxidoreductase protein [Ralstonia solanacearum
IPO1609]
Length = 334
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 29/247 (11%)
Query: 23 VFGASGYMGSYLCNKL--------GKQGSQIIIPYR-GNFYDVRDLRLCGDLGQVLFQPY 73
V G +G++G+ L + L G ++I+P R +L L + + +
Sbjct: 8 VLGGTGFIGTRLLSCLVTETFATPGLPDGRVIVPTRDAESAQAHNLTLLPRVDVMEADVH 67
Query: 74 HPRNDDEIRKAIKYSN----VVINLIG--REFATKNFTIA--DANVEIPARLARLSKEMG 125
D + A+ VINL+G ++ + A A+V++P R+ + G
Sbjct: 68 ADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRRAHVDLPRRVVDACRRHG 127
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++ +H+SAL ADP +G S + R+K GE+ V + T+FRPS ++G D F
Sbjct: 128 VKRLLHMSALGADP-------AGPSMYQRSKGDGERIVTGSDLDWTVFRPSVVFGPDDHF 180
Query: 186 LRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L + M R F LA E QPVYV DVA A A +P ++Y VGP+
Sbjct: 181 LNLFARMQRLAPFVPLAC----AEARFQPVYVDDVATAFAHALDNPATFRRVYPLVGPRV 236
Query: 245 YLLSELL 251
Y L+EL+
Sbjct: 237 YTLAELV 243
>gi|452753220|ref|ZP_21952955.1| NAD-dependent epimerase/dehydratase [alpha proteobacterium JLT2015]
gi|451959424|gb|EMD81845.1| NAD-dependent epimerase/dehydratase [alpha proteobacterium JLT2015]
Length = 311
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 124/282 (43%), Gaps = 29/282 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFGA+G++G Y+ +L ++G++I R + + + L+ LGQ+ +
Sbjct: 4 LVTVFGAAGFIGRYVVQELARRGARIRAVTR-DPHSAQSLKPLAALGQMAIVRGSVTEEA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ A + ++ VINL+G + T +V +A+ + G +HISA+ ADP
Sbjct: 63 SVAAACEGADTVINLVGI-LSEGEQTFGAVHVAGARNVAKAANAAGASALVHISAIGADP 121
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
Y RTK GE V FP A I +PS ++G D+FL + + R
Sbjct: 122 EAEPAY-------ARTKGAGEGAVRDAFPGAIILQPSIVFGPEDEFLNRFASLIRMAPIM 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWFHVVM 258
V + QP+YV D+A AI A P+ GK Y+ GP+ + EL W +
Sbjct: 175 PVVAGN---AVFQPIYVVDLAEAIAEAALRPEEHVGKSYELGGPETVTMRELFAWIARTI 231
Query: 259 KKGE-----PDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGH 295
K E PD R + G PG P+ H
Sbjct: 232 GKTESFVDVPDGVSGRLAAMF-----------GWLPGAPLTH 262
>gi|253702217|ref|YP_003023406.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M21]
gi|251777067|gb|ACT19648.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M21]
Length = 295
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 84 AIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
A+K + INLIG REF + T +VE + + + GV + + +SAL N
Sbjct: 59 AVKGCDATINLIGIIREFPGRGITFQRLHVEATRNIIAAATKHGVSRHLQMSALGTRANS 118
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
Y +++K++ E+ V + TIFRPS ++G D F+ + R + +
Sbjct: 119 EARY-------FKSKFEAEEAVRASGLDYTIFRPSIIFGPKDDFINQLAGLLRSL-PAMP 170
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
V GE + QP+ DVA A + P+A G+ ++ GP R +ELLD VM KG
Sbjct: 171 VIGDGEYQL-QPISADDVARCFAEALEKPEAIGETFELCGPDRLSYNELLDTIARVMGKG 229
Query: 262 EPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTPERV 301
L+ +PL + LF G+ +T +++
Sbjct: 230 RV--------LKIKNPLPLMRLVVPLFEGFSFFPVTSDQI 261
>gi|339626661|ref|YP_004718304.1| NAD-dependent epimerase/dehydratase [Sulfobacillus acidophilus TPY]
gi|339284450|gb|AEJ38561.1| NAD-dependent epimerase/dehydratase [Sulfobacillus acidophilus TPY]
Length = 296
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 34/238 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR------LCGDLGQVLFQPYHPR 76
+ G +GY+G+ + ++G Q+ + R ++ + L G+L +L
Sbjct: 16 ILGGTGYVGAAIRAAYAQKGHQVTVVARHPAREISGVTVVSLDVLTGNLTGIL------- 68
Query: 77 NDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
+VV+N IG RE T +V + RL +GV + +HISA
Sbjct: 69 ---------SGMDVVVNAIGIIREQPQAGITFEAMHVTLVERLLEAIAAVGVSRLLHISA 119
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L P S++++TK++ E+ + + TIFRPS ++G F + R
Sbjct: 120 LGTRPG-------AVSRYHQTKWRAEERIRQANARWTIFRPSLVFGGRAPFFELLAQLTR 172
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+A +T+ QPVY D+A +V+ +D G+ Y+ GPKRY L+EL D
Sbjct: 173 ---LPIAPLPGSGQTLFQPVYRHDIARFLVSVTEDDTTVGQTYELGGPKRYTLTELYD 227
>gi|295691425|ref|YP_003595118.1| NAD-dependent epimerase/dehydratase [Caulobacter segnis ATCC 21756]
gi|295433328|gb|ADG12500.1| NAD-dependent epimerase/dehydratase [Caulobacter segnis ATCC 21756]
Length = 321
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 11/226 (4%)
Query: 38 LGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR 97
L K G ++ + R R +R+ GD+GQ+ + R + +A+ + +NL+G
Sbjct: 22 LAKAGYRVRVAVRQPNLAYR-MRMLGDVGQIEVVQANVRVPSSVARALDGAEACVNLVGV 80
Query: 98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157
+ + + +A + ++GV++ +H+SA+ AD ++ +++ R+K
Sbjct: 81 LWESGRQKFQSIHAMGARNVAEAAAKVGVKRLVHVSAIGAD-------VNATAKYARSKG 133
Query: 158 QGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVG 217
+GE V FP ATI RPS ++G D F + M + G +T QPV+VG
Sbjct: 134 EGEAAVRAAFPGATIVRPSIVFGPEDDFFNRFAQM---AVLAPVMPLVGGDTRFQPVFVG 190
Query: 218 DVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP 263
DVAA I A P A G Y+ GP Y + E+L+ + P
Sbjct: 191 DVAAVIANAVASPAAVGVTYELGGPTVYTMREILELILTETGRNRP 236
>gi|395789072|ref|ZP_10468602.1| hypothetical protein ME9_00319 [Bartonella taylorii 8TBB]
gi|395431206|gb|EJF97233.1| hypothetical protein ME9_00319 [Bartonella taylorii 8TBB]
Length = 332
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPYHPRND 78
TVFG SG++G Y+ L K+G ++ I R +Y ++ G++GQ ++
Sbjct: 15 TVFGGSGFVGRYVVETLTKRGYRVRIAVRRPQKAYYMLQ----IGEVGQTQMLKTDIKHR 70
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ +A+ ++ + L G A ++ ++ L+ E G+ I++SAL AD
Sbjct: 71 ASVARALLGADGAVFLPGSLAQANQSNFQKAQIDGTQNVSELTAEAGI-PLIYMSALVAD 129
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
+ Y R K+ GE+ V ++P+A I RPS ++G D F + R F
Sbjct: 130 QHASCLY-------ARIKFAGEQIVQNKYPQAIIMRPSVIFGPEDCFFNTLADLSR--FL 180
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD-WFHVV 257
+ G ++ QPVYVGD+A +V A ++ GKIY GP+ +L+ F ++
Sbjct: 181 PIMPLFGGGQSKLQPVYVGDIAEFVVRALEEHVTFGKIYDLGGPQIMTFQNVLENIFKII 240
Query: 258 MKK 260
+K
Sbjct: 241 HRK 243
>gi|261855210|ref|YP_003262493.1| NAD-dependent epimerase/dehydratase [Halothiobacillus neapolitanus
c2]
gi|261835679|gb|ACX95446.1| NAD-dependent epimerase/dehydratase [Halothiobacillus neapolitanus
c2]
Length = 316
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 27/261 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRG-----NFYDVRDLRLCGDLGQVLFQPYHPRN 77
+ G +G++G L + L +QG + IP R + +R +RL G + R
Sbjct: 15 ILGGTGFVGRVLASLLSQQGYSVTIPTRHAARHRDMALMRGVRLIGGT-PAAADMANDRR 73
Query: 78 DDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
++ ++ + +++INLIG E A+V + + + GV++++H+SAL
Sbjct: 74 EENWQEVLSEGSILINLIGILNEPRHNGEGFEQAHVHTTQVALKAAAKAGVKRYLHMSAL 133
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPE-----ATIFRPSDMYGSGDKFLRYYG 190
AD N +GGS + R+K + E + EF E T FRPS ++G D FL +
Sbjct: 134 GADAN------NGGSFYLRSKGKAE-DWAHEFGEQQGIAVTSFRPSVIFGPQDSFLNRFA 186
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ R + + ++ PVYVGDVA +AA D GK GP Y L EL
Sbjct: 187 QLARLIPGVFPL--ACADSRFAPVYVGDVADQFMAAMTDTSTIGKRIDLCGPTEYRLREL 244
Query: 251 LDWF-----HVVMKKGEPDYG 266
+ + H + G PD+
Sbjct: 245 VAYAAKTSGHPRLVIGLPDWA 265
>gi|386827858|ref|ZP_10114965.1| putative nucleoside-diphosphate sugar epimerase [Beggiatoa alba
B18LD]
gi|386428742|gb|EIJ42570.1| putative nucleoside-diphosphate sugar epimerase [Beggiatoa alba
B18LD]
Length = 321
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 20/237 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++G +L +L QG Q+ + R RDL + L V + + E+
Sbjct: 6 IVGGAGFLGKHLTTRLANQGCQVNVLTRQREKH-RDLLV---LPTVKVISTNIFDQAELN 61
Query: 83 KAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
K + ++ V+NL+G E A+VE L K VEKF+++SALNAD
Sbjct: 62 KQLAGADAVVNLVGILNEVGNDGSGFRKAHVEATKNLLTACKTNKVEKFLYVSALNADAK 121
Query: 141 PPTYYISGGSQFYRTKYQGEKEVL-REFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
G S + R+K + E +L + +TIFRPS ++G+GD F + ++
Sbjct: 122 ------KGSSNYLRSKGEAEDLILATKGVSSTIFRPSVIFGNGDSFFNRFANL----LSL 171
Query: 200 LAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAA--GKIYQAVGPKRYLLSELLDW 253
V+ K PV+V DV A+V ++ + G+ Y GPK Y L EL+++
Sbjct: 172 APVFPVPCPNAKFAPVWVNDVVDALVKVIENKNGEHHGQRYNLCGPKVYSLLELVNY 228
>gi|217976348|ref|YP_002360495.1| NADH dehydrogenase (ubiquinone) [Methylocella silvestris BL2]
gi|217501724|gb|ACK49133.1| NADH dehydrogenase (ubiquinone) [Methylocella silvestris BL2]
Length = 335
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 117/244 (47%), Gaps = 16/244 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPR 76
+A VFG SG++G ++ L K G ++ + R F+ L+ G++GQ+ + R
Sbjct: 11 LAVVFGGSGFIGRHVVRALAKDGWRVRVASRRPDLAFH----LQPLGNVGQIHAVQANLR 66
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
D I +A++ ++ +N +G T + +A+ +K GV+ F+ ISA+
Sbjct: 67 YPDSIERALRGADAAVNCVGILSPAGEQTFDAIHASGAEAIAKAAKAAGVKSFVQISAIG 126
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD + Y +TK QGE V FP A I RPS ++G D+F + M R
Sbjct: 127 ADDASASAY-------AKTKAQGEALVAAAFPGAVILRPSVVFGPEDEFFNRFAAMAR-- 177
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
F + G ET QPV+VGDVA A A G IY+ GP+ + ++++
Sbjct: 178 FMPVLPLIGGGETKLQPVFVGDVARAAALALDGKAKPGAIYELGGPEVATMRRIMEFVLK 237
Query: 257 VMKK 260
V ++
Sbjct: 238 VTER 241
>gi|421899610|ref|ZP_16329973.1| nadh-ubiquinone oxidoreductase protein [Ralstonia solanacearum
MolK2]
gi|206590816|emb|CAQ56428.1| nadh-ubiquinone oxidoreductase protein [Ralstonia solanacearum
MolK2]
Length = 334
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 115/247 (46%), Gaps = 29/247 (11%)
Query: 23 VFGASGYMGSYLCNKL--------GKQGSQIIIPYR-GNFYDVRDLRLCGDLGQVLFQPY 73
V G +G++G+ L + L G ++I+P R +L L + + +
Sbjct: 8 VLGGTGFIGTRLLSCLVTETFATPGLPDGRVIVPTRDAESAQAHNLTLLPRVDVMEADVH 67
Query: 74 HPRNDDEIRKAIKYSN----VVINLIG--REFATKNFTIA--DANVEIPARLARLSKEMG 125
D + A+ VINL+G ++ + A A+V++P R+ + G
Sbjct: 68 ADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRHAHVDLPRRVVDACRRHG 127
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++ +H+SAL ADP +G S + R+K GE+ V + T+FRPS ++G D F
Sbjct: 128 VKRLLHMSALGADP-------AGPSMYQRSKGDGERIVTGSDLDWTVFRPSVVFGPDDHF 180
Query: 186 LRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L + M R F LA E QPVYV DVA A A +P +Y VGP+
Sbjct: 181 LNLFARMQRLAPFVPLAC----AEARFQPVYVDDVATAFAHALDNPATFRHVYPLVGPRV 236
Query: 245 YLLSELL 251
Y L+EL+
Sbjct: 237 YTLAELV 243
>gi|145590176|ref|YP_001156773.1| NAD-dependent epimerase/dehydratase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145048582|gb|ABP35209.1| NAD-dependent epimerase/dehydratase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 302
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 21/238 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++G + +L G ++IP + R+LRL L +V + + DE++
Sbjct: 7 LIGGNGFVGRVIAAQLQAAGYSVLIP-TSHVVAGRELRL---LPKVHLEDADVHDFDELQ 62
Query: 83 KA---IKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
I+ VINL+G +E A+V++P + + G+++++H+SAL
Sbjct: 63 NLCGRIQLRGAVINLVGVLHDKEAQPYGKVFKAAHVDLPKNIITAMQLHGLKRYLHMSAL 122
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
A+ P+ Y R+K GE V + TIFRPS ++G+ D+F+ + + +
Sbjct: 123 GANSQGPSMY-------QRSKGDGELAVKASSLDWTIFRPSVIFGAQDQFINLFSKLTK- 174
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+F L + + QPV V DVA+A V A P ++Y VGP Y + E+++
Sbjct: 175 LFPALPLANYQAQF--QPVSVDDVASAFVGALTMPQTIHQVYDLVGPTVYSMKEIVEL 230
>gi|189220486|ref|YP_001941126.1| nucleoside-diphosphate-sugar epimerase [Methylacidiphilum
infernorum V4]
gi|189187344|gb|ACD84529.1| Predicted nucleoside-diphosphate-sugar epimerase [Methylacidiphilum
infernorum V4]
Length = 348
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 127/268 (47%), Gaps = 30/268 (11%)
Query: 36 NKLGKQGSQIIIPYRG-----NFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNV 90
+L + G ++ +P R +F D+ L GDL ++ F RK +
Sbjct: 2 QQLCQLGYRVRVPSRNPQKKRSFCDLSCEFLAGDLSELSFA----------RKCCSGIDA 51
Query: 91 VINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGS 150
VI+L+G T +V+I + + SKE GV +F+H+S+L P S
Sbjct: 52 VIHLVGILVEQGRETYKKVHVQITKNMIQASKENGVRRFLHMSSLGTRPQ-------AKS 104
Query: 151 QFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYK--KGEE 208
++++TK+ E+ V + TIF+PS ++G GD F + M L ++ +G +
Sbjct: 105 RYHQTKWTAEELVRNSELDWTIFQPSVVFGIGDDFTKRLCKMLFFQNNPLLIFPLIEGGK 164
Query: 209 TIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYY 268
+ QP++V +VA A V A +P KIY GP+ + L E++ +++++ Y
Sbjct: 165 SKLQPIFVENVAEAFVRALPNPSTFHKIYPLTGPEIFSLKEIM---MLILEQAH--LAYK 219
Query: 269 RYDLRYDPVMPLKLFINGLFPGYPMGHL 296
D+ + +M + L + +F YP+ L
Sbjct: 220 IEDIPFYTLMRMGLILLSIF-IYPLAAL 246
>gi|71083205|ref|YP_265924.1| NADH-ubiquinone oxireductase [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062318|gb|AAZ21321.1| probable NADH-ubiquinone oxireductase [Candidatus Pelagibacter
ubique HTCC1062]
Length = 322
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 12/240 (5%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG SG +G +L KL K ++ + R ++ + G + + ++ +IR
Sbjct: 8 IFGGSGQIGRHLIRKLTKNNYKVTVVTRNLHQKGYAIKTQANAGYIDIVEANIFDEKKIR 67
Query: 83 KAIKYSNVVINLIGREFAT-KNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
K +++ INLIG + + K T + + P+ L++L KE V++FIH+SAL + P
Sbjct: 68 KLFSQTDICINLIGILYESGKGNTFKNIHSIFPSILSKLCKEYKVQQFIHLSALGINDAP 127
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
S++ ++K GE + + FP ATI RPS +Y D F + + +
Sbjct: 128 -------DSEYAKSKLDGELNIQKNFPLATILRPSVVYSVDDNFTTSFMTLLSRL-PFFP 179
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL-DWFHVVMKK 260
+Y G T P++ D+ I KI + VGP L E+L H++ KK
Sbjct: 180 LYYNG-STKFAPIHCSDLTDTIYHVVSK-SIYSKIIECVGPDILSLKEILKKLLHLIDKK 237
>gi|404497992|ref|YP_006722098.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter metallireducens GS-15]
gi|418067235|ref|ZP_12704583.1| NAD-dependent epimerase/dehydratase [Geobacter metallireducens
RCH3]
gi|78195590|gb|ABB33357.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter metallireducens GS-15]
gi|373559113|gb|EHP85422.1| NAD-dependent epimerase/dehydratase [Geobacter metallireducens
RCH3]
Length = 294
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 23/241 (9%)
Query: 25 GASGYMGSYLCNKLGKQGSQI--IIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
G +G++G ++ L + G +I ++ R + + GD+ ++ D
Sbjct: 7 GGTGFIGGHVRKALLEAGHRIRLLVHRRHEGVEAGVEQAEGDVTRL----------DTFA 56
Query: 83 KAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
A++ + INL+G REF + T +VE + ++ G+ + + +SAL + PN
Sbjct: 57 TAVEGCDATINLVGIIREFPGRGMTFDKLHVEATQNVVEAARRAGIRRHLQMSALGSRPN 116
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
S++++TK++ E+EV E TIFRPS ++G D F+ R + +
Sbjct: 117 -------ATSRYHQTKWRAEEEVRASGLEWTIFRPSIVFGPKDDFINKLAGYIRS-YPAV 168
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260
V G+ + QPV DVA V A + P+ G+ Y+ GP R ++LLD ++ K
Sbjct: 169 PVIGDGKYRL-QPVAADDVARCFVLALEKPETVGQAYELCGPDRISYNDLLDTIGRIVGK 227
Query: 261 G 261
G
Sbjct: 228 G 228
>gi|115522533|ref|YP_779444.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
gi|115516480|gb|ABJ04464.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
Length = 328
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 13/248 (5%)
Query: 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY 73
+S + + TVFG SG++G ++ + L ++ +I + R L+ G +GQ+
Sbjct: 2 ASHSDTLVTVFGGSGFLGRHIVSALARRDYRIRVAVRRPEL-AGHLQPIGRVGQIHAVQA 60
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
+ RN + A+ + VV+NL+G T T DA A + + +H+S
Sbjct: 61 NLRNPASVAAAMGDAGVVVNLVGILAETGKQTF-DAVQGQGAGAVAQAAATAGARMVHVS 119
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ AD + S++ R K GEK VL P ATI RPS ++G D+F + +
Sbjct: 120 AIGAD-------AASASRYARAKAAGEKAVLAAVPAATIMRPSVVFGPEDQFTNRFAALA 172
Query: 194 RHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
R + F L G QPVYVGDVA A+ A + G +Y+ GP+ + E+++
Sbjct: 173 RMLPFVPLV---GGGANRLQPVYVGDVAQAVATAVEGLAKPGAVYELGGPEVLTMREVIE 229
Query: 253 WFHVVMKK 260
++++
Sbjct: 230 AILQIIQR 237
>gi|78067849|ref|YP_370618.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. 383]
gi|77968594|gb|ABB09974.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. 383]
Length = 319
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 25/240 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++GS L N L + G Q+ I R + R L++ V + +
Sbjct: 8 LLGGTGFIGSRLVNALIESGKQVRIGTRRRDH-ARHLQML----PVEVVELEALDTRTLA 62
Query: 83 KAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + ++ INL+G + A+V +PA LA E+GV + +H+SAL AD
Sbjct: 63 RFVAGAHAAINLVGVLHGGRGTPYGPGFERAHVTLPAALATACTEVGVRRVLHMSALGAD 122
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEV----LREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ G S + R+K GE + + TIFRPS ++G GD FL + ++ R
Sbjct: 123 SH-------GASMYQRSKGDGEAALHAIAATDSLALTIFRPSVVFGPGDAFLNTFANLQR 175
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
V LA+ + QPV+VGDV A V + GK Y+ GP Y L +L+ +
Sbjct: 176 SVPVLPLAM----PDARFQPVFVGDVVRAFVNTLDLAASHGKTYELGGPTVYTLEQLVRY 231
>gi|310816858|ref|YP_003964822.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ketogulonicigenium
vulgare Y25]
gi|385234454|ref|YP_005795796.1| NADH ubiquinone oxidoreductase [Ketogulonicigenium vulgare WSH-001]
gi|308755593|gb|ADO43522.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ketogulonicigenium
vulgare Y25]
gi|343463365|gb|AEM41800.1| NADH ubiquinone oxidoreductase, putative [Ketogulonicigenium
vulgare WSH-001]
Length = 328
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFGASG++G Y+ +L + G ++ R + LR G +GQV + R+
Sbjct: 4 IVTVFGASGFLGRYVVRRLAQAGWRVRAAVRDPNLALF-LRPYGAVGQVEPVACNIRDAA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ + + ++ IN IG + T + A +AR ++ GV++ +H+SAL
Sbjct: 63 SVARVLDGADAAINCIGILTELRANTFDAVHHLGAALIARTARAAGVQRLVHVSALGTGG 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
GS ++ +K GE VL FP A + +P+ M+G D F + R
Sbjct: 123 Q--------GSAYFDSKAAGEAAVLAAFPSAVVVQPAVMFGRDDHFFNRLAGLARLPVLP 174
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ G + QPV+V DVAAAIV A PD A Y GP+ + ++
Sbjct: 175 IV----GGDVKMQPVWVDDVAAAIVTALA-PDFAAGTYPLAGPEVMTMQQI 220
>gi|427399715|ref|ZP_18890953.1| hypothetical protein HMPREF9710_00549 [Massilia timonae CCUG 45783]
gi|425721477|gb|EKU84390.1| hypothetical protein HMPREF9710_00549 [Massilia timonae CCUG 45783]
Length = 322
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 29/279 (10%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G +G++G +L +L G +++P R ++ + L + L V + + +D +
Sbjct: 9 VLIGGTGFIGQHLAARLSDDGVGVLVPVR-HYESAKQLTM---LPGVDVEVANIHDDAVL 64
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADA----NVEIPARLARLSKEMGVEKFIHISALNA 137
RK + + VINL+G + +VE+P R+A ++GV +++H+SAL A
Sbjct: 65 RKLLAGRDAVINLVGVLHGGHGRPYGEGFRHLHVELPRRIAAACADVGVPRYLHMSALGA 124
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPE--ATIFRPSDMYGSGDKFLRYYGHMWRH 195
+ + Y R+K GE R P AT+FRPS ++G GD FL + + RH
Sbjct: 125 SASSSSMY-------GRSKSDGELAA-RSQPTVAATVFRPSVVFGPGDHFLTMFARLQRH 176
Query: 196 VFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
L + + QPVYVGDVAAA A PD + GP Y L +L+
Sbjct: 177 ----LPLVPLAASCARFQPVYVGDVAAAFSIALARPDLRDATIELGGPAVYTLGQLVRLA 232
Query: 255 HVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPM 293
+ P G + R + +LF L PG P+
Sbjct: 233 GRFAGRERPVLGLPDWAAR----LQARLF--ELLPGDPL 265
>gi|167561184|ref|ZP_02354100.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia oklahomensis
EO147]
Length = 319
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 23/246 (9%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
G V G +G++GS L N L G+ + I R + R L + + V +
Sbjct: 1 MQGQTIAVLGGTGFIGSRLVNALVGAGAHVRIAARHREH-ARHLAML-PVEIVELAAFDV 58
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADA----NVEIPARLARLSKEMGVEKFIH 131
R E + + ++ +NL+G + + +V PA LA E V + +H
Sbjct: 59 R---EFARFVAGAHAAVNLVGVLHGGRGTPYGEGFERLHVAFPAALAAACIEAHVPRVLH 115
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP----EATIFRPSDMYGSGDKFLR 187
+SAL ADP+ P+ Y+ R+K GE + + + T+FRPS ++G GD FL
Sbjct: 116 VSALGADPHAPSMYL-------RSKGDGEAALHAQAAAGVLDVTVFRPSIVFGPGDAFLN 168
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + R +F + + + + QP+YVGDVA AI AC GK Y+ GP+ Y L
Sbjct: 169 TFARLQR-IFPVVPLAMP--DALMQPIYVGDVAQAIANACARDATRGKTYELGGPRTYRL 225
Query: 248 SELLDW 253
EL+ +
Sbjct: 226 EELVRY 231
>gi|189423451|ref|YP_001950628.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ]
gi|189419710|gb|ACD94108.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ]
Length = 294
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++G +L +L K+G ++++ + R V F +
Sbjct: 5 IAGGTGFVGGHLTAELLKRGHELVL--------LSHARSGSTAAGVTFVKGDVVDPAVYG 56
Query: 83 KAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
A+K + INL+G REF K T +VE A + + ++ GV +++ +SAL
Sbjct: 57 AAMKGCDAAINLVGIIREFPAKGVTFERLHVEATAGMVQATQHAGVLRYLQMSALGT--- 113
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
+ S ++RTK++GE+ V TIFRPS ++G D F+ +M R
Sbjct: 114 ----RLDAVSGYHRTKWRGEEIVRGSGLAWTIFRPSLIFGPRDAFV----NMLADNLRLA 165
Query: 201 AVY-KKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
V G+ T + QP++ DVA A + P+ AG+ ++ G R ELLD M
Sbjct: 166 PVMPTMGDGTYRLQPIHGSDVARCYADALEKPETAGQTFELCGEDRLTYRELLDAIAEAM 225
Query: 259 KKGEPDYGYYRYDLRYDPVMPLKLF 283
KG P + P +PL L
Sbjct: 226 GKGHP----------WKPSLPLSLM 240
>gi|300705509|ref|YP_003747112.1| NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum CFBP2957]
gi|299073173|emb|CBJ44531.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
CFBP2957]
Length = 334
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 29/247 (11%)
Query: 23 VFGASGYMGSYLCNKL--------GKQGSQIIIPYR-GNFYDVRDLRLCGDLGQVLFQPY 73
V G +G++G+ L + L G II+P R +L L + + +
Sbjct: 8 VLGGTGFIGTRLLSCLVTETFAAPGLPDGHIIVPTRDAESARAHNLTLLPRVDVMEADVH 67
Query: 74 HPRNDDEIRKAIKYSN----VVINLIG--REFATKNFTIA--DANVEIPARLARLSKEMG 125
D + A+ VINL+G ++ + A A+V++P R+ + G
Sbjct: 68 ADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRRAHVDLPRRVVDACRRHG 127
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++ +H+SAL ADP +G S + R+K GE+ V + T+FRPS ++G D F
Sbjct: 128 VKRLLHMSALGADP-------AGPSMYQRSKGDGERIVTGSDLDWTVFRPSVVFGPDDHF 180
Query: 186 LRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L + M R F LA E QPVYV DVA A A +P +Y VGP+
Sbjct: 181 LNLFARMQRLAPFVPLAC----AEARFQPVYVDDVATAFAHALDNPATFRHVYPLVGPRV 236
Query: 245 YLLSELL 251
Y L+EL+
Sbjct: 237 YTLAELV 243
>gi|418936324|ref|ZP_13490051.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. PDO1-076]
gi|375056965|gb|EHS53162.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. PDO1-076]
Length = 326
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 19/223 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L ++G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRALARRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFVQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R I KA++ ++ V+N +G F + DA E AR + + HISA+
Sbjct: 64 RYRGSIDKAVQGADHVVNCVGILFENGRNSF-DAVQEFGARAVAEAARAAGARLTHISAI 122
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD + Y S TK + E + P+ATI RPS ++G D F + M R
Sbjct: 123 GADAQSSSIYAS-------TKGRAEAAIQSIIPDATILRPSIVFGPEDSFFNKFAAMAR- 174
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
G +T QPVYV DVA A+ + A+GKIY+
Sbjct: 175 -ISPFLPLVGGGKTKFQPVYVEDVAEAVALSVDGKIASGKIYE 216
>gi|421891347|ref|ZP_16322152.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
K60-1]
gi|378963295|emb|CCF98900.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
K60-1]
Length = 334
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 29/247 (11%)
Query: 23 VFGASGYMGSYLCNKL--------GKQGSQIIIPYR-GNFYDVRDLRLCGDLGQVLFQPY 73
V G +G++G+ L + L G +II+P R +L L + + +
Sbjct: 8 VLGGTGFIGTRLLSCLVTETFATPGLPDGRIIVPTRDAESARAHNLTLLPRVDVMDADVH 67
Query: 74 HPRNDDEIRKAIKYSN----VVINLIG--REFATKNFTIA--DANVEIPARLARLSKEMG 125
D + A+ VINL+G ++ + A A+V++P R+ + G
Sbjct: 68 ADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRRAHVDLPRRVVDACRRHG 127
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
V++ +H+SAL ADP +G S + R+K GE+ V + T+FRPS ++G D F
Sbjct: 128 VKRLLHMSALGADP-------AGPSMYQRSKGDGERIVTGSDLDWTVFRPSVVFGPDDHF 180
Query: 186 LRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L + M R F LA E QPVYV DVA A A +P +Y VGP+
Sbjct: 181 LNLFARMQRLAPFVPLAC----AEARFQPVYVDDVATAFAHALDNPATFRHVYPLVGPRV 236
Query: 245 YLLSELL 251
Y L+EL+
Sbjct: 237 YTLAELV 243
>gi|198283206|ref|YP_002219527.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218666203|ref|YP_002425437.1| male sterility protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247727|gb|ACH83320.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218518416|gb|ACK79002.1| male sterility protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 338
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 24/253 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++G +L +L ++G + I R +L + + + + P ++
Sbjct: 8 ILGGTGFVGRHLAERLSQKGHAVRILTRNRERHRENLLVLPGVELIEANVHDPV---ALK 64
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
K + +VVINL+G +VE+P + ++G+ + +H+SAL A P P
Sbjct: 65 KQLAGRDVVINLVGILNERHQGDFDRNHVELPRLVVGACNDLGIPRLLHMSALGASPTGP 124
Query: 143 TYYISG---GSQFYRTKYQGEKEVLR----EFP--------EATIFRPSDMYGSGDKFLR 187
+ Y+ G + R E+ R E P + T FRP+ ++G GD F
Sbjct: 125 SAYLRSKGTGEEIVRQSNGNRAEMGRFDDLEEPMPLWSHGLKTTSFRPAVIFGEGDSFFN 184
Query: 188 YYGHMWRHV--FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
+ + R + F LA K QPV++ DV +A V + D G+ Y GPK Y
Sbjct: 185 RFAGLLRRIPFFIPLARSK----ARMQPVWIEDVVSAYVQSMDDEKTYGQAYDLCGPKVY 240
Query: 246 LLSELLDWFHVVM 258
L EL+ + ++
Sbjct: 241 TLGELVAYTQSLI 253
>gi|373450595|ref|ZP_09542573.1| putative NAD-dependent epimerase/dehydratase [Wolbachia pipientis
wAlbB]
gi|371932197|emb|CCE77584.1| putative NAD-dependent epimerase/dehydratase [Wolbachia pipientis
wAlbB]
Length = 321
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 10/233 (4%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+FG +G++G ++ +L G I I R L+LCG+LGQ+ N+ I
Sbjct: 11 VIFGGTGFIGKHIVRRLAAAGYLIRIFTRDQ-EKAACLKLCGNLGQISIIEGDFFNEKSI 69
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
++++ +VVINL+G + + + D +V + R+A+ ++ V IH SA+ +
Sbjct: 70 LESMEGCDVVINLVGILYEKRKYDFYDVHVGVAERIAKAAQIKSVYMMIHFSAMGIEN-- 127
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
S S++ +K +GEK V F A I +PS ++G D F + + + L
Sbjct: 128 -----SKLSRYAHSKLEGEKAVTSAFQGAIIIKPSLVFGKEDSFFNKFARLAT-ILPFLP 181
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ G T QP+ V ++A + KIY GPK Y LL +
Sbjct: 182 LIGSG-ITKFQPICVTNLAEVVYRIISFNKQDKKIYNIGGPKVYSFKSLLKFI 233
>gi|170734385|ref|YP_001766332.1| NADH dehydrogenase [Burkholderia cenocepacia MC0-3]
gi|169817627|gb|ACA92210.1| NADH dehydrogenase [Burkholderia cenocepacia MC0-3]
Length = 319
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 110/240 (45%), Gaps = 25/240 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++GS L N L G + I R + R L++ V + +
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKHVRIGTRRRDH-ARHLQML----PVDIVELDALDTRTLA 62
Query: 83 KAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + ++ INLIG + A+V +PA LA E+GV + +H+SAL AD
Sbjct: 63 RFVAGAHAAINLIGVLHGGRGTPYGPGFERAHVALPAALATACSEVGVRRLLHMSALGAD 122
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEV----LREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ G S + R+K GE + + TIFRPS ++G GD FL + ++ R
Sbjct: 123 SH-------GASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDAFLNTFANLQR 175
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
V LA+ + QPV+VGDV A V A GK Y+ GP Y L +L+ +
Sbjct: 176 TVPVLPLAM----PDARFQPVFVGDVVRAFVNTLDLTGAHGKTYELGGPTVYTLEQLVRY 231
>gi|134106435|ref|XP_778228.1| hypothetical protein CNBA2280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260931|gb|EAL23581.1| hypothetical protein CNBA2280 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 375
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 23 VFGASGYMGSYLCNKL---GKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP-----YH 74
V +G++GSY+ L + QI+ + + + LG + P
Sbjct: 23 VLVGAGFLGSYVVKALIADPRNRIQIVSRHPQSLHS-----KLSTLGAQILPPASVDITS 77
Query: 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHIS 133
P + E+RKA K ++ V++L G N A E AR + + E GV + + +S
Sbjct: 78 PSSTSELRKAFKGASAVVSLAG--LLVGNDKQMKALQEDGARRVGEAASEEGVGRVVGVS 135
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ AD + G + ++RTK +GE + P ATI RPS ++G GD F + +
Sbjct: 136 AIGAD-------LRGVTAYWRTKAKGEDAIREYHPTATIIRPSLLFGPGDSFFSRFATLA 188
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD-----PDAAGKIYQAVGPKRYLLS 248
++ L V+ G T QPVYVGDVA A+ C+D AG+I +A GP +
Sbjct: 189 KY-LPFLPVFGGG-ITRFQPVYVGDVARAVEICCRDDPIVVSQVAGRIIEAGGPDIFTYR 246
Query: 249 ELLD 252
E+++
Sbjct: 247 EMME 250
>gi|289582284|ref|YP_003480750.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|448282298|ref|ZP_21473585.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|289531837|gb|ADD06188.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|445576358|gb|ELY30813.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
Length = 309
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRG-NFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++GS+LC +L ++G ++ R D DL DL Y D I
Sbjct: 5 VAGGTGFIGSHLCTELVERGHEVTSLSRNPTSEDAADLPDEVDLASGDVSDY-----DTI 59
Query: 82 RKAIKYSNVVINLIGRE------FATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ + V+N + T + T+ E L R ++E VE+F+ ISAL
Sbjct: 60 VDTVADHDAVVNFVSLSPLYQPPSGTDHETVHLGGTE---NLVRAAEEGEVERFLQISAL 116
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA-TIFRPSDMYGSGDKFLRYYGHMWR 194
ADP+ PT YI R K + E E++RE TI RPS ++G G +FL + +
Sbjct: 117 GADPDGPTPYI-------RAKGRAE-EIVREAALGWTIVRPSIVFGDGAEFLEFTKQLTT 168
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
L G ET QP++VGD A + +D G+ Y+ GP+ L++
Sbjct: 169 PYLTGL---PGGGETRFQPIWVGDFAPMLADVLEDDTHVGQTYEIGGPQIVTLAD 220
>gi|336253299|ref|YP_004596406.1| NAD-dependent epimerase/dehydratase [Halopiger xanaduensis SH-6]
gi|335337288|gb|AEH36527.1| NAD-dependent epimerase/dehydratase [Halopiger xanaduensis SH-6]
Length = 297
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 28/245 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G+ LC +L ++G ++ P R D DL + GD+
Sbjct: 5 VAGGTGFIGTNLCTELAERGHEVTALSRNPDRNGLPDDVDLEM-GDVSAY---------- 53
Query: 79 DEIRKAIKYSNVVINLIGRE---FATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
D I A+ + V+NL+ A+ ++ L R +++ GV++++ ISAL
Sbjct: 54 DSIEGAVAGHDAVVNLVALSPLYQASDPGAQERVHLGGTENLVRAAEDHGVDRYLQISAL 113
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADP+ +I R K + EK V E TI RPS ++G G +F+ + +
Sbjct: 114 GADPDSDIDHI-------RAKGKAEKVVTDSDLEWTIVRPSIVFGDGGEFVDFTKQLTTP 166
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
L G ET QP++VGD+ + A +D AG+IY+ GP+ L++ + +
Sbjct: 167 YVTGL---PGGGETRFQPIWVGDLVPMLADAIEDDAHAGEIYELGGPQVVTLADATELVY 223
Query: 256 VVMKK 260
K
Sbjct: 224 AAEGK 228
>gi|190571246|ref|YP_001975604.1| NADH-ubiquinone oxidoreductase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357518|emb|CAQ54955.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
Length = 316
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 10/231 (4%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG +G++G ++ +L G I I R L+LCG+LGQ+ N+ I
Sbjct: 7 IFGGTGFIGKHIVRRLAAAGYLIRIFTRDQ-EKAACLKLCGNLGQISIIEGDFFNERSIL 65
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
++++ +VVINL+G + + + D +V + R+A+ ++ V IH SA+ +
Sbjct: 66 ESMEGCDVVINLVGILYEKRKYDFYDVHVRVAERVAKAAQIKSVYMMIHFSAMGIEN--- 122
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
S S++ +K +GEK V F A I +PS ++G D F + + + L +
Sbjct: 123 ----SKLSRYAHSKLEGEKAVTSAFQGAIIIKPSLVFGKEDSFFNKFARLAT-ILPFLPL 177
Query: 203 YKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
G T QP+ V ++A + KIY GPK Y LL +
Sbjct: 178 IGSG-ITKFQPICVTNLAEVVYRIISFNKQDKKIYNIGGPKVYSFKSLLKF 227
>gi|254246955|ref|ZP_04940276.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
gi|124871731|gb|EAY63447.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
Length = 319
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 110/240 (45%), Gaps = 25/240 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++GS L N L G + I R + R L++ V + +
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKHVRIGTRRRDH-ARHLQML----PVDIVELDALDTRTLA 62
Query: 83 KAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + ++ INL+G + A+V +PA LA E+GV + +H+SAL AD
Sbjct: 63 RFVAGAHAAINLVGVLHGGRGTPYGPGFERAHVALPAALATACSEVGVRRLLHMSALGAD 122
Query: 139 PNPPTYYISGGSQFYRTKYQGEKE----VLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ G S + R+K GE V + TIFRPS ++G GD FL + ++ R
Sbjct: 123 SH-------GASMYQRSKGDGEAALHAVVATDSLALTIFRPSVVFGPGDAFLNTFANLQR 175
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
V LA+ + QPV+VGDV A V A GK Y+ GP Y L +L+ +
Sbjct: 176 TVPVLPLAM----PDARFQPVFVGDVVRAFVNTLDLVGAHGKTYELGGPTVYTLEQLVRY 231
>gi|213018644|ref|ZP_03334452.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
gi|212995595|gb|EEB56235.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
Length = 321
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 10/232 (4%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG +G++G ++ +L G I I R L+LCG+LGQ+ N+ I
Sbjct: 12 IFGGTGFIGKHIVRRLAAAGYLIRIFTRDQ-EKAACLKLCGNLGQISIIEGDFFNERSIL 70
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
++++ +VVINL+G + + + D +V + R+A+ ++ V IH SA+ +
Sbjct: 71 ESMEGCDVVINLVGILYEKRKYDFYDVHVRVAERVAKAAQIKSVYMMIHFSAMGIEN--- 127
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
S S++ +K +GEK V F A I +PS ++G D F + + + L +
Sbjct: 128 ----SKLSRYAHSKLEGEKAVTSAFQGAIIIKPSLVFGKEDSFFNKFARLAT-ILPFLPL 182
Query: 203 YKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
G T QP+ V ++A + KIY GPK Y LL +
Sbjct: 183 IGSG-ITKFQPICVTNLAEVVYRIISFNKQDKKIYNIGGPKVYSFKSLLKFI 233
>gi|58259475|ref|XP_567150.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57223287|gb|AAW41331.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 375
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 28/243 (11%)
Query: 23 VFGASGYMGSYLCNKL---GKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP-----YH 74
V +G++GSY+ L + QI+ + + + LG + P
Sbjct: 23 VLVGAGFLGSYVVKALIADPRNRIQIVSRHPQSLHSK-----LSTLGAQILPPASVDITS 77
Query: 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
P + E+RKA K ++ V++L G + + + R+ + E GV + + +SA
Sbjct: 78 PSSTSELRKAFKGASAVVSLAGLLVGSDK-QMKALQEDGARRVGEAASEEGVGRVVGVSA 136
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ AD + G + ++RTK +GE + P ATI RPS ++G GD F + + +
Sbjct: 137 IGAD-------LRGVTAYWRTKAKGEDAIREYHPTATIIRPSLLFGPGDSFFSRFATLAK 189
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD-----PDAAGKIYQAVGPKRYLLSE 249
+ L V+ G T QPVYVGDVA A+ C+D AG+I +A GP + E
Sbjct: 190 Y-LPFLPVFGGG-ITRFQPVYVGDVARAVEICCRDDPIVVSQVAGRIIEAGGPDIFTYRE 247
Query: 250 LLD 252
+++
Sbjct: 248 MME 250
>gi|220933518|ref|YP_002512417.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219994828|gb|ACL71430.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 314
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 19/236 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQI-IIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++GS+L +L G ++ +I R + RDL + + + P +
Sbjct: 8 VLGGTGFVGSHLVARLIASGRRVKVITRRRERH--RDLLVLPGVSLIEGDVNDPAT---L 62
Query: 82 RKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
++ + V+NLIG E A+V++ +A + GV++ +H+SAL AD
Sbjct: 63 KRHFTGCDAVVNLIGILNEKGHDGSGFRRAHVDLSRHVAETCRATGVKRLLHMSALGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREF--PEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
+G S + RTK + E V + + TIFRPS ++G GD FL + + R +
Sbjct: 123 G------TGTSLYQRTKGEAESLVRTQSGDTKVTIFRPSVIFGPGDSFLNRFAGLLR-IA 175
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
L + G PVYVGDV V + +D G+ Y GPK Y L EL+ +
Sbjct: 176 PVLPLACPGARF--APVYVGDVVTRFVDSLEDAGTFGQRYDLCGPKVYTLKELVQY 229
>gi|154245635|ref|YP_001416593.1| NADH dehydrogenase (ubiquinone) [Xanthobacter autotrophicus Py2]
gi|154159720|gb|ABS66936.1| NADH dehydrogenase (ubiquinone) [Xanthobacter autotrophicus Py2]
Length = 328
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 116/240 (48%), Gaps = 25/240 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L +G ++ + R F L+ G +GQ+ +
Sbjct: 15 LVTVFGGSGFLGRHVVRALAMRGYRVRVAVRRPELAGF-----LQPLGFVGQIQVSQANV 69
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHI 132
R + + +A+ + V+NL+G + ++F DA AR +A+ + G +H+
Sbjct: 70 RYPESVARAVDGAEAVVNLVGVLSQSGRQSF---DAVHAFGARAIAQATAREGA-PLVHV 125
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
SA+ AD N P+ Y RTK +GE V +A IFRPS ++G D F + M
Sbjct: 126 SAIGADANSPSGY-------GRTKAEGEAAVRAAAADAIIFRPSLLFGPEDDFFNRFAAM 178
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
R + G T QPV+VGDVAAAI+ A AG Y+ GP+ EL++
Sbjct: 179 AR--LSPVLPLIGGGTTRFQPVFVGDVAAAILKAVDGKAKAGTTYELGGPQVRTFRELME 236
>gi|167835095|ref|ZP_02461978.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia
thailandensis MSMB43]
gi|424901827|ref|ZP_18325343.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia
thailandensis MSMB43]
gi|390932202|gb|EIP89602.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia
thailandensis MSMB43]
Length = 319
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 23/246 (9%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
G V G +G++GS L N L + G+++ I R + L D+ V +
Sbjct: 1 MQGQTIAVLGGTGFIGSRLVNALVEAGARVRIGSRRREHARHLAMLPVDI--VELSAFDV 58
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIAD----ANVEIPARLARLSKEMGVEKFIH 131
R E+ + + ++ +NL+G + +V +PA LA E V + +H
Sbjct: 59 R---ELARFVAGADAAVNLVGVLHGGHGKPYGERFERLHVALPAALAAACIEARVPRMLH 115
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP----EATIFRPSDMYGSGDKFLR 187
+SAL ADP P+ Y+ R+K GE + + + T+FRPS ++G GD F+
Sbjct: 116 VSALGADPRAPSMYL-------RSKGDGEAALRAQAAAGVLDVTVFRPSIVFGPGDAFVN 168
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + R +F L + + + QP+YVGDVA AI AC G+ Y+ GP+ Y L
Sbjct: 169 TFARLQR-IFPVLPLAMP--DALMQPIYVGDVAQAIANACARDATRGRTYELGGPRTYRL 225
Query: 248 SELLDW 253
E++ +
Sbjct: 226 EEIVRY 231
>gi|408376942|ref|ZP_11174545.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Agrobacterium albertimagni AOL15]
gi|407748901|gb|EKF60414.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Agrobacterium albertimagni AOL15]
Length = 326
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 21/222 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHPRN 77
TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F + R
Sbjct: 11 TVFGGSGFVGRHVVRALAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFVQANLRY 65
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISALN 136
+ A++ ++ V+N +G F + DA + AR +A ++ +G H+SA+
Sbjct: 66 RSSVDAAVQGADHVVNCVGILFESGRNGF-DAVQDFGARAVAEAARSVG-ATLTHVSAIG 123
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD + Y + TK + E V P+A I RPS ++G D F + M R +
Sbjct: 124 ADAKSDSVYAA-------TKGRAEAAVQSILPDAIILRPSIVFGPEDGFFNKFAAMAR-I 175
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
L + G+ T QPVYVGDVA + A A GKIY+
Sbjct: 176 APALPLVGGGK-TKFQPVYVGDVAEVVARAVDGSIARGKIYE 216
>gi|321251752|ref|XP_003192168.1| hypothetical protein CGB_B3060C [Cryptococcus gattii WM276]
gi|317458636|gb|ADV20381.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 367
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 23 VFGASGYMGSYLCNKL---GKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP-----YH 74
V +G++GSY+ L + QI+ + + Y LG + P
Sbjct: 23 VLVGAGFLGSYVAKALIADPRNRIQIVSRHPQSLYSK-----LSTLGSQILPPASIDITS 77
Query: 75 PRNDDEIRKAIKYSNVVIN----LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130
P + E+RK K ++ V++ L+G + K A R+ + E GV + +
Sbjct: 78 PSSPLELRKTFKGASAVVSMAGLLVGSDKQMKALQEDGAK-----RVGEAAAEEGVGRVV 132
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
ISA+ A+P G + ++RTK +GE + P AT+ RPS ++G GD F +
Sbjct: 133 GISAIGANPQ-------GATAYWRTKAKGEDAIREYHPTATVIRPSLLFGPGDSFFSRFA 185
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-----DAAGKIYQAVGPKRY 245
+ ++ L V+ G T QPVYVGDVA A+ C+D AG+I +A GP
Sbjct: 186 TLAKY-LPVLPVFGGG-FTRFQPVYVGDVARAVEICCRDDPTVVGQVAGRIIEAGGPDIL 243
Query: 246 LLSELLD 252
E+++
Sbjct: 244 TYREIME 250
>gi|418056603|ref|ZP_12694655.1| NAD-dependent epimerase/dehydratase [Hyphomicrobium denitrificans
1NES1]
gi|353209220|gb|EHB74625.1| NAD-dependent epimerase/dehydratase [Hyphomicrobium denitrificans
1NES1]
Length = 324
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 9/194 (4%)
Query: 59 LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLA 118
L+ G +GQ+ + R D I +A+ + VIN +G T +VE R+A
Sbjct: 45 LQPMGVVGQIHAVQSNLRFADSIVRAVDGAETVINSVGILAPVGAQTFEAVHVEGARRVA 104
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
+ ++E G ++ IH+SA+ AD + S++ TK +GE VL EFP A I RPS +
Sbjct: 105 KAAREAGAQRLIHVSAIGADQH-------SNSRYAVTKAEGEAAVLAEFPSAIILRPSIV 157
Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
+G D+F + + R + G T QP++VGDV A G IY+
Sbjct: 158 FGPEDQFFNRFAALAR--ISPVLPLVGGGRTKFQPIFVGDVGEAAANVAAGAGKPGTIYE 215
Query: 239 AVGPKRYLLSELLD 252
GP+ ++L+
Sbjct: 216 LGGPQVVTFRDILE 229
>gi|27375828|ref|NP_767357.1| oxidoreductase [Bradyrhizobium japonicum USDA 110]
gi|27348966|dbj|BAC45982.1| oxidoreductase [Bradyrhizobium japonicum USDA 110]
Length = 321
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 112/235 (47%), Gaps = 16/235 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G + L K+ ++ + R L+ G +GQV + R
Sbjct: 8 LVTVFGGSGFLGRNVVRALCKRDYRVRVAVRRPEL-AGYLQPSGKVGQVHVVQANLRYPA 66
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A++ S+VVINL+G E ++F DA A + + +H+SA+ A
Sbjct: 67 SVEAALRDSDVVINLVGILTESGKQSF---DAVQAKGAETVAKAAAAVGARLVHVSAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D P S++ + K GE VL P ATIFRPS M+G D+F + + R
Sbjct: 124 DAESP-------SRYAKAKAAGEAAVLAAVPSATIFRPSVMFGPEDQFTNRFAALARM-- 174
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G ET QPVYVGDVA AI A AG Y+ GP+ + E+++
Sbjct: 175 -SPVLPLIGGETKMQPVYVGDVATAIADAVDGKAKAGATYELGGPEVLTMREIIE 228
>gi|418296882|ref|ZP_12908725.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Agrobacterium
tumefaciens CCNWGS0286]
gi|355539057|gb|EHH08299.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Agrobacterium
tumefaciens CCNWGS0286]
Length = 326
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 108/227 (47%), Gaps = 27/227 (11%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRILAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFAQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHI 132
R D I KA++ ++ V+N +G E F DA E A+ +A +++ G HI
Sbjct: 64 RYRDSIVKAVEDADHVVNCVGILTESGRNTF---DAVQEFGAKAIAEAARDAGA-TLTHI 119
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
SA+ A+ PT Y RTK + E + P A I RPS ++G D F + M
Sbjct: 120 SAIGAEAGSPTGY-------GRTKGRAEAAIHSILPGAVILRPSIIFGPEDDFFNKFAKM 172
Query: 193 WRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
R + F L G +T QPVYV DVA A+ G IY+
Sbjct: 173 ARSMPFLPLI---GGGKTRFQPVYVEDVAEAVARGVDGKLKPGAIYE 216
>gi|393775168|ref|ZP_10363482.1| putative NAD-dependent epimerase/dehydratase [Ralstonia sp. PBA]
gi|392717745|gb|EIZ05305.1| putative NAD-dependent epimerase/dehydratase [Ralstonia sp. PBA]
Length = 344
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 79 DEIRKAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
D + A+ VINL+G R A A+V +P RL + GV + +H+SA
Sbjct: 88 DRLLAALGEDGTVINLVGILHDRRGTPYGPGFAKAHVALPRRLVAMCARHGVRRLLHMSA 147
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L A+ P+ Y+ R+K GE V + T+FRPS ++G GD FL + M R
Sbjct: 148 LGAESAGPSMYL-------RSKGDGEAAVTMSMLDWTVFRPSVVFGPGDSFLNLFARMQR 200
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
F LA QP+ V DVA AIV A + + + Y GP+ Y L EL+
Sbjct: 201 FAPFVPLACAGAR----FQPIAVEDVAQAIVNAFGNAETIHQCYDLGGPQVYTLEELV 254
>gi|420242322|ref|ZP_14746383.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
CF080]
gi|398067977|gb|EJL59441.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
CF080]
Length = 326
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 13/242 (5%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRND 78
+ TVFG SG++G ++ L K+G ++ + R D+ L G +GQV + R
Sbjct: 9 LVTVFGGSGFVGRHVVRALVKRGYRVRVAVRRP--DLAGFLLPAGYVGQVSLIQANLRYR 66
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ +A++ ++ V+N +G F + T DA + AR + K HISA+ AD
Sbjct: 67 QSVLRAVEGASHVVNCVGILFESGRNTF-DAVQDFGARAVVDAARAAGAKLTHISAIGAD 125
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
N + Y ++K + E +L P+A I RPS ++G D F + M R F
Sbjct: 126 ANSESSY-------AQSKGRAEATILSTLPDAIILRPSIVFGPEDSFFNKFASMAR-TFP 177
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
L + G +T QPVYV DVA + + A+GKIY+ G + + L+ V
Sbjct: 178 ALPLIGGG-KTKFQPVYVEDVAETVARSVDGTIASGKIYELGGGEVMTFRQCLETVLRVT 236
Query: 259 KK 260
+
Sbjct: 237 NR 238
>gi|386399406|ref|ZP_10084184.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
WSM1253]
gi|385740032|gb|EIG60228.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
WSM1253]
Length = 321
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 112/235 (47%), Gaps = 16/235 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G + L ++ +I + R L+ G +GQV + R
Sbjct: 8 LVTVFGGSGFLGRNVVRALCRRDYRIRVAVRRPEL-AGYLQPSGKVGQVHTVQANVRYPA 66
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
I A++ S+VVINL+G E ++F DA A + IH+SA+ A
Sbjct: 67 SIEAALRDSHVVINLVGILAEGGAQSF---DAVQAKGAETVAKAAAAAGADLIHVSAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D P S++ R K GE VL P ATIFRPS M+G D+F + + R +
Sbjct: 124 DAESP-------SRYARAKAAGEAAVLAAVPSATIFRPSVMFGPEDQFTNRFAALARML- 175
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
V G ET QPVYVGDVA A+ A AG Y+ GP+ + E+++
Sbjct: 176 --PVVPLIGGETRMQPVYVGDVATAVADAVDGKAKAGATYELGGPEVLTMREIIE 228
>gi|296536317|ref|ZP_06898428.1| NADH dehydrogenase (ubiquinone) [Roseomonas cervicalis ATCC 49957]
gi|296263352|gb|EFH09866.1| NADH dehydrogenase (ubiquinone) [Roseomonas cervicalis ATCC 49957]
Length = 315
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 133/267 (49%), Gaps = 21/267 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
VA +FG +G++G +L +L + Q+ I R N VR L G LGQV +P R D
Sbjct: 6 VAVLFGGTGFIGRHLVPRLARLDYQLRIVTR-NPEAVRPLATQGQLGQV--EPVSLRLSD 62
Query: 80 E--IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
E + + + +++V+NL+G + E+P R+ R + GV + + +SA+ A
Sbjct: 63 EAAMARLFQGADLVVNLVGILAEKRKGDFQRLQGELPGRIGRAAAAAGVGRVVQVSAIGA 122
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D P S++ R+K GE + FP ATI RPS ++G D+F + M + +
Sbjct: 123 DAASP-------SEYARSKAAGEAALRAAFPRATILRPSIVFGPEDQFFNRFAGMAQLLP 175
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
V T QPV+VGDVAAAIVAA P+A G+ Y+ GP+ EL+ + V
Sbjct: 176 VMPVVCGA---TRFQPVFVGDVAAAIVAAATRPEAPGQTYELGGPRVASFRELMGYVLEV 232
Query: 258 MKKGE-----PDYGYYRYDLRYDPVMP 279
+ + PD G R R ++P
Sbjct: 233 TGRPKRLVPLPD-GLVRLQARLGEMLP 258
>gi|374621782|ref|ZP_09694312.1| NAD-dependent epimerase/dehydratase [Ectothiorhodospira sp. PHS-1]
gi|373940913|gb|EHQ51458.1| NAD-dependent epimerase/dehydratase [Ectothiorhodospira sp. PHS-1]
Length = 312
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 114/244 (46%), Gaps = 19/244 (7%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++G+++ +L G Q+ + R + R L + + V + PR +
Sbjct: 7 CVLGGTGFVGTHVVARLAGGGRQVKVITR-HVSRHRHLLVVPGVRLVEADCHDPR---VL 62
Query: 82 RKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
R+ + VINL+G E A+V++ ++ ++E GV++ +H+SALNAD
Sbjct: 63 RQHFSDCDGVINLVGILNERGRDGSGFRHAHVDLARKVIECAREAGVKRLLHMSALNADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEV--LREFPEATIFRPSDMYGSGDKFL-RYYGHMWRHV 196
SG S + RTK + E V + T FRPS ++G D F R+ G +
Sbjct: 123 A------SGPSHYLRTKGEAENIVHTMAGNVRVTSFRPSVIFGPTDSFFNRFAGLLRLSP 176
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
LA + PVYVGDVA V A +D G+ + GP Y L EL+ +
Sbjct: 177 VLPLAC----PDARFAPVYVGDVAQHFVDALEDRGTWGQRIELCGPSVYTLKELVSYTAQ 232
Query: 257 VMKK 260
VM +
Sbjct: 233 VMAR 236
>gi|332559625|ref|ZP_08413947.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides WS8N]
gi|332277337|gb|EGJ22652.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides WS8N]
Length = 328
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 12/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ ++G ++ + R + ++ G +GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAQEGWRVRVAVR-RPNEALFVKPYGVVGQVEPVFCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R + ++ V+N +G + E AR+ARL+ GV+ + +SA+ AD
Sbjct: 63 SVRAVMHGADAVVNCVGILAESGKNRFQSVQAEGAARVARLAAAEGVQTLVQLSAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
P+ Y RTK GE V FP A I RPS ++G D F + M R
Sbjct: 123 QSPSAY-------GRTKAAGEAAVREAFPRAVILRPSVIFGPEDDFFNRFAQMTRF---S 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
+ G T QPV+V DVA A VA A G Y+ GP +L+ V++
Sbjct: 173 PVLPVVGGSTKFQPVFVDDVAQAAVAGVLGRAAPGT-YELGGPDVETFRDLMKMLLRVVE 231
Query: 260 K 260
+
Sbjct: 232 R 232
>gi|225629825|ref|ZP_03787748.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591320|gb|EEH12437.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 196
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG +G++G ++ +L ++G I I + N L+LCG+LGQ+ ++ +
Sbjct: 7 IFGGTGFIGKHIVRRLAEEGYLIKI-FTCNQEKAACLKLCGNLGQISIFKGDFFDEKSVL 65
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ ++ +V INL+G + K +V+I R+A+ +K V IH SA+ +
Sbjct: 66 EGMEECDVAINLVGILYEAKKHDFYAVHVKIAERIAKAAKMKNVPMMIHFSAMGIEN--- 122
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV-FRKLA 201
S S++ ++K +GEK V F EA I RPS ++G D F + + + F L
Sbjct: 123 ----SKLSKYAQSKLEGEKAVTSAFQEAIIIRPSLVFGKEDNFFNKFARLATILPFLPLI 178
Query: 202 VYKKGEETIK-QPVYVGDVA 220
G T K QP+ V D+A
Sbjct: 179 ----GNGTTKFQPICVTDLA 194
>gi|383620553|ref|ZP_09946959.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
gi|448697911|ref|ZP_21698789.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
gi|445781277|gb|EMA32138.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
Length = 306
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G LC +L +G + R D R D +V D IR
Sbjct: 5 VAGGTGFIGRNLCTELHDRGHDVTALSRSP-----DDRGLPDGVEVAMGDVSAA--DSIR 57
Query: 83 KAIKYSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
A+ + V+NL+ F + ++ L L++ GV++F+ +SAL ADP
Sbjct: 58 DAVAGHDAVVNLVALSPLFQPRGTDHETVHLRGTENLVDLAETEGVDRFVQLSALGADPQ 117
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
T YI R K + E V E TIFRPS ++G G +F+ + + L
Sbjct: 118 GDTDYI-------RAKGKAEGVVRESDLEWTIFRPSVVFGDGGEFVEFTKELTTPYVTGL 170
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
G +T QP++VGD+ + A +D G+ Y+ GP+ L+E+ +
Sbjct: 171 ---PGGGKTRFQPIWVGDLVPMLADALEDETHVGETYEVAGPEVLTLAEVTE 219
>gi|398826440|ref|ZP_10584684.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
YR681]
gi|398221078|gb|EJN07506.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
YR681]
Length = 321
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 117/249 (46%), Gaps = 16/249 (6%)
Query: 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY 73
+S + + TVFG SG++G + L ++ ++ + R L+ G +GQV
Sbjct: 2 ASNSETLVTVFGGSGFLGRNVVRALCRRDYRVRVAVRRPEL-AGYLQPSGKVGQVHIVQA 60
Query: 74 HPRNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIH 131
+ R + A++ S+VVINL+G E ++F DA + + + +H
Sbjct: 61 NLRYPASVEAALRDSDVVINLVGILAEGGAQSF---DAVQAKGSETVAKAAAAAGARLVH 117
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGH 191
+SA+ AD + P S++ R K GE VL P ATIFRPS M+G D+F +
Sbjct: 118 VSAIGADADSP-------SRYARAKAAGEAAVLAAVPSATIFRPSVMFGPEDQFTNRFAA 170
Query: 192 MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ R + G ET QPVYVGDVA AI A AG Y+ G + + E++
Sbjct: 171 LARM---SPVLPLIGAETKMQPVYVGDVATAIADAVDGKAKAGATYELGGAEVLTMREII 227
Query: 252 DWFHVVMKK 260
+ + +
Sbjct: 228 ETIVAIADR 236
>gi|218659771|ref|ZP_03515701.1| probable NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli IE4771]
Length = 304
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 59 LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLA 118
L+ G++GQ+ F + R + I +A++ ++ V+N +G T T DA E AR
Sbjct: 25 LQPLGNVGQISFVQANLRYRNSIDRAVEGASHVVNCVGILHETGRNTF-DAVQEFGARAV 83
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
+ HISA+ A+ N S + RTK + E +L P+A IFRPS +
Sbjct: 84 AEAARNAGASLAHISAIGANAN-------SDSDYGRTKGRAETAILSIKPDAVIFRPSIV 136
Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
+G D F + M R + G +T QPVYV DVA A+ A +GK+Y+
Sbjct: 137 FGPEDSFFNKFADMAR--MSPVLPLIGGGKTKFQPVYVEDVAEAVARAVDGKVPSGKVYE 194
Query: 239 AVGPKRYLLSELLDWFHVVMKKGEP 263
GP+ E L+ V + P
Sbjct: 195 LGGPEVLSFRECLETMLKVTSRKNP 219
>gi|221640646|ref|YP_002526908.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides KD131]
gi|221161427|gb|ACM02407.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides KD131]
Length = 324
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 12/239 (5%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
T++G SG++G Y+ ++ ++G ++ + R + ++ G +GQV + R+D +
Sbjct: 2 TIYGGSGFVGRYIARRMAQEGWRVRVAVR-RPNEALFVKPYGVVGQVEPVFCNIRDDASV 60
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
R + ++ V+N +G + E AR+ARL+ GV+ + +SA+ AD
Sbjct: 61 RAVMHGADAVVNCVGILAESGKNRFQSVQAEGAARVARLAAAEGVQTLVQLSAIGADAQS 120
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P+ Y RTK GE V FP A I RPS ++G D F + M R
Sbjct: 121 PSAY-------GRTKAAGEAAVREAFPRAVILRPSVIFGPEDDFFNRFAQMTRF---SPV 170
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260
+ G T QPV+V DVA A VA A G Y+ GP +L+ V+++
Sbjct: 171 LPVVGGATKFQPVFVDDVAQAAVAGVLGRAAPGT-YELGGPDVETFRDLMKMLLRVVER 228
>gi|417858675|ref|ZP_12503732.1| NADH-ubiquinone oxidoreductase [Agrobacterium tumefaciens F2]
gi|338824679|gb|EGP58646.1| NADH-ubiquinone oxidoreductase [Agrobacterium tumefaciens F2]
Length = 326
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 23/250 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L ++G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRMLARRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFAQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISA 134
R D I KA++ ++ V+N +G + T DA E A+ +A ++ G HISA
Sbjct: 64 RYRDSIIKAVEDADHVVNCVGILTESGRNTF-DAVQEFGAKAIAEAVRDAGA-TLTHISA 121
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ A+ PT Y RTK + E + P A I RPS ++G D F + M R
Sbjct: 122 IGAEAGSPTGY-------GRTKGRAEAAIHSVLPNAVILRPSIIFGPEDDFFNKFAKMAR 174
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ F L G T QPVYV DVA A+ + G IY+ G + L+
Sbjct: 175 GLPFLPLI---GGGTTKFQPVYVEDVAEAVARSVDGKLKPGAIYELGGQDVMTFRDCLEA 231
Query: 254 FHVVMKKGEP 263
+ P
Sbjct: 232 VLAATYRQRP 241
>gi|399577284|ref|ZP_10771037.1| nucleoside-diphosphate sugar epimerase [Halogranum salarium B-1]
gi|399237667|gb|EJN58598.1| nucleoside-diphosphate sugar epimerase [Halogranum salarium B-1]
Length = 294
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 119/283 (42%), Gaps = 41/283 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++G+ L +L +G + + R D + G V + D I
Sbjct: 5 VIGGSGFIGTNLSRELVDRGHDVTVLARNPEDDELPDSVKTVSGDV-------TDYDSIE 57
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEI----PARLARLSKEMGVEKFIHISALNAD 138
A + N VI L+ K ++EI + ++ V++FI +SAL AD
Sbjct: 58 GAFEGQNAVIFLVALSPLFKPKGGDQKHLEIHLGGTENAVKAAEAHDVKRFIQMSALGAD 117
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P+ PT YI R K Q E V + TIFRPS ++G G +F+ + +
Sbjct: 118 PDGPTAYI-------RAKGQAENVVQASELKWTIFRPSVVFGEGGEFVSFTKKLAPPYVT 170
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
L G +T QP++V D+ + A D GK Y+ GP+R L+E+ H
Sbjct: 171 PL---PGGGKTRFQPIWVDDLVPMLADALDDDAHVGKTYEVGGPERLTLAEVAKLAH--- 224
Query: 259 KKGEPDYGYYRYDLRYDPVMPLK-------LFINGLFPGYPMG 294
D R V+P+ L I G+ PG+PMG
Sbjct: 225 ----------GADGRSVTVVPIPMGLAGVGLSIGGMLPGFPMG 257
>gi|421595759|ref|ZP_16039732.1| oxidoreductase [Bradyrhizobium sp. CCGE-LA001]
gi|404272129|gb|EJZ35836.1| oxidoreductase [Bradyrhizobium sp. CCGE-LA001]
Length = 321
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 108/235 (45%), Gaps = 16/235 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G + L K+ +I + R L+ G +GQV + R
Sbjct: 8 LVTVFGGSGFLGRNVVRALCKRDYRIRVAVRRPEL-AGYLQPSGKVGQVHTVQANLRYPA 66
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A++ S+VVINL+G E + F DA A + + IH+SA+ A
Sbjct: 67 SVAAALRDSHVVINLVGVLTESGAQTF---DAVQARGAETVAKAAAAAGAELIHVSAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D P+ Y K GE V P ATIFRPS M+G D+F + + R
Sbjct: 124 DAESPSSYAK-------AKAAGEAAVRAAVPSATIFRPSVMFGPEDQFTNRFAALARM-- 174
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G +T QPVYVGDVA AI A AG Y+ GP+ + E+++
Sbjct: 175 -SPVLPLIGGDTRMQPVYVGDVATAIAEAVDGKATAGATYELGGPEVLTMREIIE 228
>gi|94309122|ref|YP_582332.1| putative NAD-dependent epimerase/dehydratase [Cupriavidus
metallidurans CH34]
gi|93352974|gb|ABF07063.1| putative NAD-dependent epimerase/dehydratase precursor [Cupriavidus
metallidurans CH34]
Length = 340
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 34/252 (13%)
Query: 23 VFGASGYMGSYLCNKLGKQGS-------------------QIIIPYRGNFYDVRDLRLCG 63
V G +G++GS+L ++L + +II+ R N + L L
Sbjct: 8 VIGGAGFIGSHLISRLAGAATASGAPLDPASHPDSPIAPERIIVGTR-NVEHAQHLLLLP 66
Query: 64 DLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNF----TIADANVEIPARLAR 119
+ + D+ ++ +V+NL+G + A A+V++P ++
Sbjct: 67 RVEVIELGLADDAVLDDAIGSLGVDGIVVNLVGVLHGERGDPYGPQFAAAHVDLPRQVVE 126
Query: 120 LSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMY 179
K GV + +H+SAL ADP P+ Y+ R+K G + V + TIFRPS ++
Sbjct: 127 SCKRTGVRRLLHMSALGADPQGPSMYL-------RSKGDGGRIVRESGLDWTIFRPSVVF 179
Query: 180 GSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
G D FL + + + V QPV+V DV A V A P+ G++Y+
Sbjct: 180 GPDDHFLNLFAQLQQ---MAPVVPLACAHARFQPVFVLDVVQAFVNAMVHPETIGQVYEL 236
Query: 240 VGPKRYLLSELL 251
GP+ Y L EL+
Sbjct: 237 GGPQVYTLEELV 248
>gi|77464732|ref|YP_354236.1| NADH-ubiquinone oxidoreductase [Rhodobacter sphaeroides 2.4.1]
gi|77389150|gb|ABA80335.1| NADH-ubiquinone oxidoreductase [Rhodobacter sphaeroides 2.4.1]
Length = 328
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 12/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ ++G ++ + R + ++ G +GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAQEGWRVRVAVR-RPNEALFVKPYGVVGQVEPVFCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R + ++ V+N +G + E AR+AR++ GV+ + +SA+ AD
Sbjct: 63 SVRAVMHGADAVVNCVGILAESGKNRFQSVQAEGAARVARIAAAEGVQTLVQLSAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
P+ Y RTK GE V FP A I RPS ++G D F + M R
Sbjct: 123 QSPSAY-------GRTKAAGEAAVREAFPRAVILRPSVIFGPEDDFFNRFAQMTRF---S 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
+ G T QPV+V DVA A VA A G Y+ GP +L+ V++
Sbjct: 173 PVLPVVGGATKFQPVFVDDVAQAAVAGVLGRAAPGT-YELGGPDVETFRDLMKMLLRVVE 231
Query: 260 K 260
+
Sbjct: 232 R 232
>gi|126463572|ref|YP_001044686.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC
17029]
gi|429207293|ref|ZP_19198552.1| NAD-dependent epimerase/dehydratase [Rhodobacter sp. AKP1]
gi|126105236|gb|ABN77914.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC
17029]
gi|428189668|gb|EKX58221.1| NAD-dependent epimerase/dehydratase [Rhodobacter sp. AKP1]
Length = 328
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 12/241 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ ++G ++ + R + ++ G +GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAQEGWRVRVAVR-RPNEALFVKPYGVVGQVEPVFCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+R + ++ V+N +G + E AR+ARL+ GV+ + +SA+ AD
Sbjct: 63 SVRAVMHGADAVVNCVGILAESGKNRFQSVQAEGAARVARLAAAEGVQTLVQLSAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
P+ Y RTK GE V FP A I RPS ++G D F + M R
Sbjct: 123 QSPSAY-------GRTKAAGEAAVREAFPRAVILRPSVIFGPEDDFFNRFAQMTRF---S 172
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
+ G T QPV+V DVA A VA A G Y+ GP +L+ V++
Sbjct: 173 PVLPVVGGATKFQPVFVDDVAQAAVAGVLGRAAPGT-YELGGPDVETFRDLMKMLLRVVE 231
Query: 260 K 260
+
Sbjct: 232 R 232
>gi|430805149|ref|ZP_19432264.1| putative NAD-dependent epimerase/dehydratase [Cupriavidus sp.
HMR-1]
gi|429502672|gb|ELA00980.1| putative NAD-dependent epimerase/dehydratase [Cupriavidus sp.
HMR-1]
Length = 340
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 34/252 (13%)
Query: 23 VFGASGYMGSYLCNKLGKQGS-------------------QIIIPYRGNFYDVRDLRLCG 63
V G +G++GS+L ++L + +II+ R N + L L
Sbjct: 8 VIGGAGFIGSHLISRLAGAATASGAPLDPASSPDSPIAPDRIIVGTR-NVEHAQHLLLLP 66
Query: 64 DLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNF----TIADANVEIPARLAR 119
+ + D+ ++ +V+NL+G + A A+V++P ++
Sbjct: 67 RVEVIELGLADDAVLDDAIGSLGVDGIVVNLVGVLHGERGDPYGPQFAAAHVDLPRQVVE 126
Query: 120 LSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMY 179
K GV + +H+SAL ADP P+ Y+ R+K G + V + TIFRPS ++
Sbjct: 127 SCKRTGVRRLLHMSALGADPQGPSMYL-------RSKGDGGRIVRESGLDWTIFRPSVVF 179
Query: 180 GSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
G D FL + + + V QPV+V DV A V A P+ G++Y+
Sbjct: 180 GPDDHFLNLFAQLQQ---MAPVVPLACAHARFQPVFVLDVVQAFVNAMVHPETIGQVYEL 236
Query: 240 VGPKRYLLSELL 251
GP+ Y L EL+
Sbjct: 237 GGPQVYTLEELV 248
>gi|289209614|ref|YP_003461680.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sp. K90mix]
gi|288945245|gb|ADC72944.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sp. K90mix]
Length = 320
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 119/246 (48%), Gaps = 20/246 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++G + +L +G ++ + R + RDL + ++ + + P +
Sbjct: 11 LLGGTGFVGHQIIRRLIDRGIRVRVLSR-RPHRHRDLLVNPEVDLIEGSAHDPAT---LE 66
Query: 83 KAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD-P 139
+A + VINL+G E A+VE+ + ++ GV +F+ +SAL AD
Sbjct: 67 RAFAGQDAVINLVGILNERGRDGSGFRAAHVELTQKALAAAESCGVRRFLQMSALKADME 126
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLR-EFPEATIFRPSDMYGSGDKFLRYYGHMWR-HVF 197
NPP++Y+ RTK + E+ V + T+FRPS ++G D L + + + F
Sbjct: 127 NPPSHYL-------RTKGEAEQLVFACDAFAVTVFRPSVIFGRDDSLLNRFATLLKISPF 179
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
LA + PVYVGDVA V + + P+ G+ Y+ GPK Y L EL+ + +
Sbjct: 180 MPLA----RADAKFAPVYVGDVAEHFVDSLEAPETFGEGYELCGPKAYTLEELVRYVGRL 235
Query: 258 MKKGEP 263
+ + P
Sbjct: 236 IGRRRP 241
>gi|404491554|ref|YP_006715660.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Pelobacter carbinolicus DSM 2380]
gi|77543721|gb|ABA87283.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Pelobacter carbinolicus DSM 2380]
Length = 297
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 25/244 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V GA+G++G + +L G + + R G D GD+ +
Sbjct: 5 VTGATGFVGHEVIRQLLAAGHRPVCLVRPGSEGKLPPAVDEIREGDVTR----------P 54
Query: 79 DEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ +R A+ V++L+G RE+ + T + + A + +K V++F+ +S+
Sbjct: 55 ESLRGALAGCEAVVHLVGIIREYPRQKVTFDRLHRQATAHMLSAAKAQKVQRFVLMSSNG 114
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
A+ G + +YR+K++ E+ + + TIFRPS MYG+ D F M R +
Sbjct: 115 AEAE-------GSTAYYRSKWKAEQLLKASSLDWTIFRPSVMYGAEDNFCTLLASMVR-I 166
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
+ V+ G I PV V DVAA IVA+ PDA G+ + G + ELLD
Sbjct: 167 LPVVPVFGDGCYRIA-PVAVQDVAATIVASLARPDACGRSFACCGDQMVTFDELLDIIGG 225
Query: 257 VMKK 260
V+++
Sbjct: 226 VLRR 229
>gi|302504489|ref|XP_003014203.1| hypothetical protein ARB_07508 [Arthroderma benhamiae CBS 112371]
gi|291177771|gb|EFE33563.1| hypothetical protein ARB_07508 [Arthroderma benhamiae CBS 112371]
Length = 572
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 19/247 (7%)
Query: 11 GGRSSFNGVVATVFGASGYMGSYLCNKLG-KQGSQIIIPYRGNFYDVRDLRLCGDLGQVL 69
GR+S G +G + LG +QG +I+PYR R L++ GDLG+V+
Sbjct: 110 AGRTSGANGNGGKGGTFANVGIVTRSSLGARQGCTVIVPYREEMTK-RHLKVTGDLGRVV 168
Query: 70 FQPYHPRNDDEIRKAIKYSNV-VINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
F I + SN + + NF+ D +VE R+ + V++
Sbjct: 169 FMVCMRNTPIGIYYLLNDSNRNMTSATPNRSRRANFSYEDIHVEGTERIVESVAKYDVDR 228
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
++H+S+ NA + P S+F+RTK QGE FPE TI RP+ M+G D+ L
Sbjct: 229 YVHVSSYNASLDSP-------SEFFRTKAQGENVARSIFPETTIVRPAPMFGFEDRLLHR 281
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL-- 246
+ ++F + ++ PV+ DV A+ + + ++ GPK Y
Sbjct: 282 LAGV-TNIFTSNHMQER-----YWPVHAIDVGRALEIMLMEEWTTAQTFELYGPKNYSTK 335
Query: 247 -LSELLD 252
+SEL+D
Sbjct: 336 EISELVD 342
>gi|448365984|ref|ZP_21554238.1| NAD-dependent epimerase/dehydratase [Natrialba aegyptia DSM 13077]
gi|445654593|gb|ELZ07444.1| NAD-dependent epimerase/dehydratase [Natrialba aegyptia DSM 13077]
Length = 308
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 38/240 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRG-------NFYDVRDLRLCGDLGQVLFQPYHP 75
V G +G++G++LC +L ++G ++ R F D DL GD+
Sbjct: 5 VAGGTGFIGTHLCTELAERGHEVTALSRNPTAEDADEFPDEVDLS-TGDVSAY------- 56
Query: 76 RNDDEIRKAIKYSNVVINLIGRE------FATKNFTIADANVEIPARLARLSKEMGVEKF 129
D I A+ + ++NL+ T + T+ E L R ++E GV++F
Sbjct: 57 ---DSIVDAVADHDAIVNLVALSPLYQPPGGTDHETVHLGGTE---NLVRAAEEHGVDRF 110
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
+ +SAL ADP+ PT YI RTK + E V TI RP+ ++G G +FL +
Sbjct: 111 LQLSALGADPDGPTAYI-------RTKGRAESIVREAALSWTIVRPAVVFGDGGEFLSFA 163
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
+ L G +T QP++VGD + A +D G+ Y+ GP+ L++
Sbjct: 164 KRLTTPYLTGL---PGGGKTRFQPIWVGDFVPILADALED-SHVGRTYEIGGPQVVTLAD 219
>gi|374368710|ref|ZP_09626755.1| putative NAD-dependent epimerase/dehydratase [Cupriavidus
basilensis OR16]
gi|373099683|gb|EHP40759.1| putative NAD-dependent epimerase/dehydratase [Cupriavidus
basilensis OR16]
Length = 341
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 110/255 (43%), Gaps = 36/255 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYR-GNFYD--------VRDLRLCGDLGQVLFQP- 72
V G +G++GS+L +L + P G + + R +L P
Sbjct: 8 VIGGAGFVGSHLVARLAGVATASATPLEPGTVVEPPLDPERILAATRDAEHAQHLLLLPR 67
Query: 73 -----YHPRNDDEIRKAIKY---SNVVINLIGREFATK----NFTIADANVEIPARLARL 120
RND + AI +V+NL G + A A+V +P R+
Sbjct: 68 VEVIELDVRNDVALNAAIGTLGTDGIVVNLAGILHGERAEPYGAAFAAAHVALPRRIVEA 127
Query: 121 SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYG 180
+ GV + +H+SAL AD P+ Y+ R+K GE+ V + TIFRPS M+G
Sbjct: 128 CRSTGVRRLLHMSALGADSAGPSMYL-------RSKGDGERVVRESALDWTIFRPSVMFG 180
Query: 181 SGDKFLRYYGHMWRHVFRKLA--VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
D FL + M ++LA V + QPVYV DVA A+V A P G Y
Sbjct: 181 PDDHFLNLFAQM-----QQLAPVVPLACAQARFQPVYVQDVAQAMVNAMATPATIGHAYD 235
Query: 239 AVGPKRYLLSELLDW 253
GP+ + L EL+ +
Sbjct: 236 LAGPQVFTLEELVRF 250
>gi|414169266|ref|ZP_11425103.1| hypothetical protein HMPREF9696_02958 [Afipia clevelandensis ATCC
49720]
gi|410886025|gb|EKS33838.1| hypothetical protein HMPREF9696_02958 [Afipia clevelandensis ATCC
49720]
Length = 322
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 11/234 (4%)
Query: 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
+ TVFG SG++G ++ +L ++ +I + R L+ G +GQ+ + R
Sbjct: 7 TLVTVFGGSGFLGRHVIRELARRDYRIRVGVRRPEL-AGHLQPLGRVGQIHAVQANVRYP 65
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
++ A + ++VV+NL+G A DA + A + + +H+SA+ AD
Sbjct: 66 ASVQAAAQGASVVVNLVG-ILAQGGAQTFDAVQDKGAEAVARAAAAIGARMVHVSAIGAD 124
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
N S +YR+K GE V P ATI RPS ++G D+F + + R
Sbjct: 125 AN-------SASAYYRSKAAGEAAVAAALPSATIMRPSIVFGPEDQFTNRFAGLAR--LS 175
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G T QPVY GDVA AI A AG Y+ GP+ + ++++
Sbjct: 176 PMLPLIGGGLTKLQPVYAGDVATAIADAVDGKTKAGATYELGGPEVMTMRQIIE 229
>gi|448299014|ref|ZP_21489027.1| NAD-dependent epimerase/dehydratase [Natronorubrum tibetense GA33]
gi|445588548|gb|ELY42790.1| NAD-dependent epimerase/dehydratase [Natronorubrum tibetense GA33]
Length = 341
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 28/234 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G LC +L +G + P + + D R GD
Sbjct: 40 VAGGTGFIGMNLCTELDDRGHDVTALARDPSDADLPEGVD-RAMGDASAY---------- 88
Query: 79 DEIRKAIKYSNVVINLIGREFATK---NFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
D I + + V+NL+ K + ++ A L R ++E GV++F+ +S L
Sbjct: 89 DSIVDTVAGHDAVVNLVSLSPLYKPPGDLDHETVHLGGTANLVRAAEEGGVDRFVQMSGL 148
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADP+ PT F R K E V TIFRPS ++G G +FL + +
Sbjct: 149 GADPDAPT-------DFLRAKGNAENVVRDSHLAWTIFRPSVVFGDGAEFLEFTKQVTTP 201
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
L G ET QP+++GDV + A D G+IY+ GP+ L++
Sbjct: 202 YVTGL---PNGGETRFQPIWIGDVVPMLADALADSRHVGEIYEIAGPQIVTLAD 252
>gi|322418063|ref|YP_004197286.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18]
gi|320124450|gb|ADW12010.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18]
Length = 294
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 22/240 (9%)
Query: 25 GASGYMGSYLCNKLGKQGSQI-IIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRK 83
G +G++G ++ L +G I ++ +R V D+ ++ P +E
Sbjct: 7 GGTGFVGGHVREALLARGHSIRLLVHRRGLGTV-----TPDVEEIEGDATKPETFEE--- 58
Query: 84 AIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
A++ + INL+G REF + T +VE + +++ V + + +SAL +
Sbjct: 59 ALRGCDAAINLVGIIREFPGRGITFQHLHVEATGNILAAARKAQVRRHLQMSALGTRSDS 118
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFL-RYYGHMWRHVFRKL 200
+Y +++KYQ E++V + + TIFRPS ++G D F+ + G+M F +
Sbjct: 119 TAHY-------FKSKYQAEEQVRKSGLDYTIFRPSIIFGPKDDFINKLAGYM--RTFPAM 169
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260
V GE + QP+ DVA A + P+ Y+ GP RY +ELLD VM K
Sbjct: 170 PVIGDGEYQL-QPISADDVARCFADALEKPETIRHEYELCGPDRYSYNELLDLVGRVMGK 228
>gi|336324017|ref|YP_004603984.1| NAD-dependent epimerase/dehydratase [Flexistipes sinusarabici DSM
4947]
gi|336107598|gb|AEI15416.1| NAD-dependent epimerase/dehydratase [Flexistipes sinusarabici DSM
4947]
Length = 297
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 119/246 (48%), Gaps = 25/246 (10%)
Query: 22 TVF--GASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
TVF GA+G++G+ + +L K+ ++ + R +D RL + ++ N +
Sbjct: 4 TVFLTGATGFVGNEVLEELLKKNYRVKVLVRD-----KD-RLKENSADIIPVEGDVLNPE 57
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
RK ++ + VI+L+G REF ++ T + E + + G+++FIH+SA A
Sbjct: 58 SFRKEMEDVDTVIHLVGIIREFPSQGITFEKLHFEATKNVVDTAVSNGIKRFIHMSANGA 117
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
N T Y ++TKY+ E+ V TIFRPS +YG GD F+ +M +
Sbjct: 118 RENVVTDY-------HKTKYKAEEYVRNSGLTYTIFRPSLIYGPGDSFV----NMLADMI 166
Query: 198 RKLAVYK---KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+KL V+ KG+ + QPV V +VA + GK Y G K Y ELL+
Sbjct: 167 KKLPVFSYFGKGDYKM-QPVSVYEVAEIFAESIPISTMYGKTYSVCGDKVYTYRELLNII 225
Query: 255 HVVMKK 260
V+ K
Sbjct: 226 MDVINK 231
>gi|350552374|ref|ZP_08921577.1| NAD-dependent epimerase/dehydratase [Thiorhodospira sibirica ATCC
700588]
gi|349794545|gb|EGZ48359.1| NAD-dependent epimerase/dehydratase [Thiorhodospira sibirica ATCC
700588]
Length = 313
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 29/273 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++G ++ ++L I + R + Y R L + + + + P + +
Sbjct: 8 VLGGSGFLGQHVLSQLASPQRMINVITR-HPYRHRHLLIVPGVRLIKADIHDPATLNRLF 66
Query: 83 KAIKYSNVVINLIGR--EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
+ + VINL+G E + + +V++ ++ +E V + +H+S LNAD +
Sbjct: 67 SGV---DAVINLVGSFDEGRHPDTRLRHLHVDLVRKIMSACREQRVARLLHVSTLNADAS 123
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEA--TIFRPSDMYGSGDKFLRYYGHMWRH--- 195
+G S++ RTK +GE V + E TIFRPS ++G D FL + + R
Sbjct: 124 ------NGPSEYLRTKGEGENLVHTQAGETQTTIFRPSMIFGPQDGFLTEFATLLRFSPV 177
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
F ++ PV+ GDVAA + A K + GK Y GPK Y L++L+ +
Sbjct: 178 FFVPCPGFRCA------PVFAGDVAACMAQALKQRHSVGKRYDLCGPKVYTLAQLVRYTA 231
Query: 256 VVMKKGE-----PDYGYYRYDLRYDPVMPLKLF 283
+ + PD G R R ++P K F
Sbjct: 232 TLTGQRRLIVPLPD-GASRLQARLLGILPGKPF 263
>gi|338972420|ref|ZP_08627795.1| NAD-dependent epimerase/dehydratase [Bradyrhizobiaceae bacterium
SG-6C]
gi|338234584|gb|EGP09699.1| NAD-dependent epimerase/dehydratase [Bradyrhizobiaceae bacterium
SG-6C]
Length = 351
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 11/234 (4%)
Query: 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
+ TVFG SG++G ++ +L ++ +I + R L+ G +GQ+ + R
Sbjct: 36 TLVTVFGGSGFLGRHVIRELARRDYRIRVGVRRPEL-AGHLQPLGRVGQIHAVQANVRYP 94
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
++ A + ++VV+NL+G A DA + A + + +H+SA+ AD
Sbjct: 95 ASVQAAAQGASVVVNLVG-ILAQGGAQTFDAVQDKGAEAVARAAAAIGARMVHVSAIGAD 153
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
N S +YR+K GE V P ATI RPS ++G D+F + + R
Sbjct: 154 AN-------SASSYYRSKAAGEAAVAAALPSATIMRPSIVFGPEDQFTNRFAGLAR--LS 204
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G T QPVY GDVA AI A AG Y+ GP+ + ++++
Sbjct: 205 PILPLIGGGLTKLQPVYAGDVATAIADAVDGKAKAGATYELGGPEVMTMRQIIE 258
>gi|161526197|ref|YP_001581209.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans ATCC
17616]
gi|189349087|ref|YP_001944715.1| NADH dehydrogenase [Burkholderia multivorans ATCC 17616]
gi|221215559|ref|ZP_03588522.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans CGD1]
gi|160343626|gb|ABX16712.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans ATCC
17616]
gi|189333109|dbj|BAG42179.1| NADH dehydrogenase [Burkholderia multivorans ATCC 17616]
gi|221164547|gb|EED97030.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans CGD1]
Length = 319
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 25/247 (10%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
+G + G +G++GS L L G + I R + L D+ V + +
Sbjct: 1 MDGQTVALLGGTGFIGSRLVAALIDAGKHVRIGTRRREHARHLSMLPVDI--VELETFDT 58
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIH 131
R+ + + + + +NL+G + A+V +PA LAR E GV + +H
Sbjct: 59 RS---LARFVAGAQAAVNLVGVLHGGRGTPYGAGFERAHVALPAALARACVEAGVRRVLH 115
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGEKEV----LREFPEATIFRPSDMYGSGDKFLR 187
+SAL AD + P+ Y R+K GE + E TIFRPS ++G GD FL
Sbjct: 116 MSALGADSHGPSMY-------QRSKGDGEAALHAIAATEPLAVTIFRPSVVFGPGDAFLN 168
Query: 188 YYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
+ + R LA+ + QPV+VGDV A V + A G+ Y+ GP Y
Sbjct: 169 TFARLQRIAPVLPLAM----PDARFQPVFVGDVVRAFVNTLELSAAHGRTYELGGPTVYT 224
Query: 247 LSELLDW 253
L +L+ +
Sbjct: 225 LEQLVRY 231
>gi|424909231|ref|ZP_18332608.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392845262|gb|EJA97784.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 326
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 23/225 (10%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L K+G +I + R F L+ G++GQ+ F +
Sbjct: 9 LVTVFGGSGFVGRHVVRLLAKRGYRIRVAVRRPDLAGF-----LQPLGNVGQISFAQANL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR-LARLSKEMGVEKFIHISA 134
R D I KA++ ++ V+N +G + T DA E A+ +A +++ G HISA
Sbjct: 64 RYRDSIVKAVEDADHVVNCVGILTESGRNTF-DAVQEFGAKAIAEAARDAGA-TLTHISA 121
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ A+ + T Y RTK + E + P A I RPS ++G D F + M R
Sbjct: 122 IGAEASSSTGY-------GRTKGRAEAAIHSVLPAAVILRPSIIFGPEDDFFNKFAKMAR 174
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
+ F L G +T QPVYV DVA A+ + G IY+
Sbjct: 175 GMPFLPLI---GGGKTRFQPVYVEDVAEAVARSVDGKLKPGAIYE 216
>gi|328545554|ref|YP_004305663.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Polymorphum gilvum
SL003B-26A1]
gi|326415295|gb|ADZ72358.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Polymorphum
gilvum SL003B-26A1]
Length = 324
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 12/248 (4%)
Query: 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-LRLCGDLGQVLFQP 72
++ NG + TVFG SG++G ++ L ++G +I R D+ + L+ G +GQ++
Sbjct: 3 TALNGKLVTVFGGSGFVGRHVVQALARRGYRIRAAVRRP--DLAEHLQPLGAVGQIMPVQ 60
Query: 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
+ R + +A++ ++ V+NL+G + + + +A ++ G+ H+
Sbjct: 61 ANLRYRWSVDRAVEGADAVVNLVGILYESGKQSFDSVQAFGSRAIAEAARAAGLGAVTHV 120
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
SA+ ADP P+ Y R+K GE VL P++ I RPS ++G D F + M
Sbjct: 121 SAIGADPRSPSAY-------ARSKAAGEAAVLETLPDSVILRPSIIFGPEDDFFNRFAAM 173
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
R + G ET QPVYVGDVAAA+ A AG +Y+ GP+ E L+
Sbjct: 174 AR--LSPVLPLVGGGETRFQPVYVGDVAAAVAKAVDGEARAGTVYELGGPEVKSFKECLE 231
Query: 253 WFHVVMKK 260
+ ++
Sbjct: 232 LMLKITRR 239
>gi|107023964|ref|YP_622291.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia AU
1054]
gi|116691051|ref|YP_836674.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia
HI2424]
gi|105894153|gb|ABF77318.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia AU
1054]
gi|116649140|gb|ABK09781.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia
HI2424]
Length = 319
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 108/240 (45%), Gaps = 25/240 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++GS L N L G + I R + R L++ V + +
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKHVRIGTRRRDH-ARHLQML----PVDIVELDALDTRTLA 62
Query: 83 KAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + ++ INL+G + A+V +P LA E+GV + +H+SAL AD
Sbjct: 63 RFVAGAHAAINLVGVLHGGRGTPYGPGFERAHVALPVALATACSEVGVRRLLHMSALGAD 122
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEV----LREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
G S + R+K GE + + TIFRPS ++G GD FL + ++ R
Sbjct: 123 SR-------GASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDAFLNTFANLQR 175
Query: 195 HV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
V LA+ + QPV+VGDV A V A GK Y+ GP Y L +L+ +
Sbjct: 176 TVPVLPLAM----PDARFQPVFVGDVVRAFVNTLDLVGAHGKTYELGGPTVYTLEQLVRY 231
>gi|113866282|ref|YP_724771.1| nucleoside-diphosphate-sugar epimerase [Ralstonia eutropha H16]
gi|113525058|emb|CAJ91403.1| predicted nucleoside-diphosphate-sugar epimerase [Ralstonia
eutropha H16]
Length = 340
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 108/251 (43%), Gaps = 32/251 (12%)
Query: 23 VFGASGYMGSYLCNKL-------------GKQGSQIIIPYR-----GNFYDVRDLRLCGD 64
V G +G++GS+L ++L G I P R N + L L
Sbjct: 8 VIGGAGFIGSHLVSRLAGAASASGAPLEPGANPDSPIAPDRIVVGTRNIEHAQHLLLLPR 67
Query: 65 LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATK----NFTIADANVEIPARLARL 120
+ V D+ ++ +V+NL+G + A A+VE+ ++A
Sbjct: 68 VEVVELGLADNAALDDAIGSLGVDGIVVNLVGVLHGERADPYGEAFASAHVEMVRQIAAS 127
Query: 121 SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYG 180
GV + +H+SAL AD N P+ Y+ R+K GE+ V + TIFRPS ++G
Sbjct: 128 CLSTGVRRLLHMSALGADSNGPSMYL-------RSKGDGERVVRASGLDWTIFRPSVVFG 180
Query: 181 SGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAV 240
D FL + HM + V QPV+V DV A + A +P G Y+
Sbjct: 181 PDDHFLNLFAHMQQ---MAPVVPLACAHARFQPVFVQDVVQAYLNAMVNPATIGHGYELG 237
Query: 241 GPKRYLLSELL 251
GP+ Y L EL+
Sbjct: 238 GPRVYTLEELV 248
>gi|374571778|ref|ZP_09644874.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
WSM471]
gi|374420099|gb|EHQ99631.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
WSM471]
Length = 321
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G + L ++ ++ + R L+ G +GQV + R
Sbjct: 8 LVTVFGGSGFLGRNVVRALCRRDYRVRVAVRRPEL-AGYLQPSGKVGQVHTVQANVRYPA 66
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
I A++ S+VVINL+G E ++F DA A + + IH+SA+ A
Sbjct: 67 SIEAALRDSHVVINLVGILAEGGAQSF---DAVQARGAETIAKAAAAAGAQLIHVSAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D P S++ R K GE ++ P ATIFRPS M+G D+F + + R +
Sbjct: 124 DAESP-------SRYARAKAAGEAAIMAAVPSATIFRPSVMFGPEDQFTNRFAALARML- 175
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G +T QPVYVGDVA A+ A AG Y+ GP+ + E+++
Sbjct: 176 --PVLPLIGADTRMQPVYVGDVATAVADAVDGKAKAGATYELGGPEVLTMREIIE 228
>gi|388566586|ref|ZP_10153030.1| NAD-dependent epimerase/dehydratase [Hydrogenophaga sp. PBC]
gi|388266239|gb|EIK91785.1| NAD-dependent epimerase/dehydratase [Hydrogenophaga sp. PBC]
Length = 317
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 31/240 (12%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G ++C KL ++G I +P R + L +V + ++
Sbjct: 6 VLGGTGFVGRHVCEKLQRRGWHITVPTR----QIAKANAVLPLPRVTVVQADVHDPRQLL 61
Query: 83 KAIKYSNVVINLI----GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ ++ + V+NL+ G E A + +VE+P +A + +H+SAL A
Sbjct: 62 RLMEGQDAVVNLVAILHGNEEAFERV-----HVELPLSIAEACLADAACRLVHVSALGAS 116
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFP-EATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
+ P+ Y R+K +GE EVLR T+ RPS ++G GD FL + + R F
Sbjct: 117 ADAPSMY-------QRSKARGE-EVLRATGLSLTLLRPSVIFGRGDHFLNLFARLQR--F 166
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-----AGKIYQAVGPKRYLLSELLD 252
+ + G + QPV+V DVA AI A C DA G+ + GP+ L EL+
Sbjct: 167 SPV-MPLAGADARLQPVWVEDVAEAI-AVCLGDDALGRASIGRTIECAGPEVLSLRELVQ 224
>gi|58040279|ref|YP_192243.1| oxidoreductase [Gluconobacter oxydans 621H]
gi|58002693|gb|AAW61587.1| Putative oxidoreductase [Gluconobacter oxydans 621H]
Length = 340
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 109/237 (45%), Gaps = 15/237 (6%)
Query: 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN 77
G V V G G++G L +L G + + D R GD G+V F +
Sbjct: 32 GRVVAVLGGGGFVGRELVGRLVASGHVVRVGSGNPEADQALARFPGD-GRVEFIKASVND 90
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARL-SKEMGVEKFIHISALN 136
D + ++ INL+ + + NVE ARLA L ++ GVE+++H+SA+
Sbjct: 91 ADSLEHLFSGADAGINLVSI-MSPDVKAMHRVNVE-GARLAALVARREGVEQYLHMSAIG 148
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
A P Y R+K E+ V FPEA + RPS ++G D F + + + +
Sbjct: 149 ASIQSPGNY-------GRSKGLAERVVREVFPEAALLRPSVIFGPEDSFFNMFALIAK-L 200
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
L V+ G QPVYVGDVA A +A P+ AG +A GP + EL+ +
Sbjct: 201 SPVLPVFAAGMRF--QPVYVGDVARAAMALVT-PERAGMTVEAGGPDVLTMKELMAF 254
>gi|345863267|ref|ZP_08815479.1| NAD-dependent epimerase/dehydratase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345125728|gb|EGW55596.1| NAD-dependent epimerase/dehydratase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 317
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQG--SQIII--PYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
+ G SG++G +L +LG +G S++I P R R L++ V + +
Sbjct: 8 ILGGSGFVGQHLVARLGNKGISSRVITRHPQRH-----RQLKVIPGTELVKSNIF---DR 59
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + + + VINLIG T + +VE+ + + G+++ +H+SALNA
Sbjct: 60 AALSRQFQGCDAVINLIGTLNETTGQSFHRLHVELVDVVVEACRSAGIKRLLHMSALNAS 119
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLRE---FPEATIFRPSDMYGSGDKFL-RYYGHMWR 194
+G S + RTK +GE F T FRPS ++G GD F R+ G + R
Sbjct: 120 E------ANGSSHYLRTKGEGESWAHTRGGGFAAVTSFRPSVIFGPGDSFFNRFAGLLER 173
Query: 195 H-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ LA E+ PVYVGDV A A D G Y GP+ + L EL+ +
Sbjct: 174 APLLFPLAC----AESRFAPVYVGDVVEAFSQALDDSRTFGHHYDLCGPRSFSLGELVSY 229
>gi|339324397|ref|YP_004684090.1| nucleoside-diphosphate-sugar epimerase [Cupriavidus necator N-1]
gi|338164554|gb|AEI75609.1| nucleoside-diphosphate-sugar epimerase [Cupriavidus necator N-1]
Length = 340
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 108/251 (43%), Gaps = 32/251 (12%)
Query: 23 VFGASGYMGSYLCNKL-------------GKQGSQIIIPYR-----GNFYDVRDLRLCGD 64
V G +G++GS+L ++L G I P R N + L L
Sbjct: 8 VIGGAGFIGSHLVSRLAGAASASGAPLEPGANPDSPIAPDRIVVGARNIEHAQHLLLLPR 67
Query: 65 LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATK----NFTIADANVEIPARLARL 120
+ V D+ ++ +V+NL+G + A A+VE+ ++A
Sbjct: 68 VEVVELGLADNAALDDAIGSLGVDGIVVNLVGVLHGERADPYGEAFASAHVEMVRQIAAS 127
Query: 121 SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYG 180
GV + +H+SAL AD N P+ Y+ R+K GE+ V + TIFRPS ++G
Sbjct: 128 CLSTGVRRLLHMSALGADSNGPSMYL-------RSKGDGERVVRASGLDWTIFRPSVVFG 180
Query: 181 SGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAV 240
D FL + HM + V QPV+V DV A + A +P G Y+
Sbjct: 181 PDDHFLNLFAHMQQ---MAPVVPLACAHARFQPVFVQDVVQAYLNAMVNPATIGHGYELG 237
Query: 241 GPKRYLLSELL 251
GP+ Y L EL+
Sbjct: 238 GPQVYTLEELV 248
>gi|302698293|ref|XP_003038825.1| hypothetical protein SCHCODRAFT_48473 [Schizophyllum commune H4-8]
gi|300112522|gb|EFJ03923.1| hypothetical protein SCHCODRAFT_48473 [Schizophyllum commune H4-8]
Length = 334
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 16/182 (8%)
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R D +R K ++VV++L+G T + +V+ +A+++ ++G K IHISA+
Sbjct: 76 RKIDTLRPIFKDASVVVSLVGILNETWE-QFEEIHVQGACNVAQVAHDVGA-KLIHISAI 133
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD N P Y ++K GE+ VLR P+ATI RPS ++G D F + + ++
Sbjct: 134 GADENSPILY-------AKSKGLGERAVLRVCPDATIIRPSLVFGPEDSFFNRFATLSKY 186
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK-----DPDAAGKIYQAVGPKRYLLSEL 250
L + G QPVYV D+A AI + D AGKI++A GP+ + E+
Sbjct: 187 -LPFLPAFGGGTARF-QPVYVDDIAKAIEIISRRNRGMDTRVAGKIFEAGGPEIFTWREI 244
Query: 251 LD 252
++
Sbjct: 245 ME 246
>gi|118594420|ref|ZP_01551767.1| NAD-dependent epimerase/dehydratase [Methylophilales bacterium
HTCC2181]
gi|118440198|gb|EAV46825.1| NAD-dependent epimerase/dehydratase [Methylophilales bacterium
HTCC2181]
Length = 293
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 113/229 (49%), Gaps = 21/229 (9%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-RLCGDLGQVLFQPYHPRND 78
V ++FG +G++G+ L ++L K+ Y + R + L + F R+D
Sbjct: 3 VVSIFGGTGFIGTELIHELEKKN------YEIRLFTRRKIPHTLNTLSKTRF--IQLRDD 54
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
++ + S+++I+L+G K T D + +L+++++++ +++FIHI AL A
Sbjct: 55 TKLSNELIGSDIIIDLVGILHEQKGITFDDVHSGRLKKLSKIAQKLNIKRFIHIGALGAS 114
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEA--TIFRPSDMYGSGDKFLRYYGHMWRHV 196
N P+ Y+ ++K +GEK + ++ TI++PS ++G DKF+ + ++
Sbjct: 115 VNAPSKYL-------QSKGKGEKHIKKQCSNLAWTIYKPSIVFGIDDKFVNLFHNIIS-- 165
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
F + + ++ QP++V D+ I+ D K + GP Y
Sbjct: 166 FTPI-IGLISPHSMFQPIWVKDLVDIIINGIDDKKTFQKTFNVAGPTSY 213
>gi|307544363|ref|YP_003896842.1| NAD-dependent epimerase/dehydratase [Halomonas elongata DSM 2581]
gi|307216387|emb|CBV41657.1| NAD-dependent epimerase/dehydratase [Halomonas elongata DSM 2581]
Length = 305
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
VFG +G++G+ L +L + G P R R D + R+ +
Sbjct: 12 VVFGGTGFLGAVLVRELVESGR----PARLVARRPRWPSWAEDSDPLEILEADIRDPRRV 67
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A++ + V+N A++N D +V A LAR +E G+E+ + +S + A +
Sbjct: 68 AEALEGAGAVVNATSLYVASRNVGFEDIHVTAAAALARQVREAGIERLVQLSGIGASRDS 127
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
+ Y+ R + GE V+ P+A I RPS ++G D FL + R +
Sbjct: 128 ASAYV-------RARAHGEIAVMDALPKAVILRPSVLFGRNDSFLSNLARLTR--LPAIP 178
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
++ +G + QPV+V DVA AIV ++ A P+RYL
Sbjct: 179 LFGQGHNRL-QPVHVVDVARAIV----------RLTGADRPERYL 212
>gi|328954019|ref|YP_004371353.1| NAD-dependent epimerase/dehydratase [Desulfobacca acetoxidans DSM
11109]
gi|328454343|gb|AEB10172.1| NAD-dependent epimerase/dehydratase [Desulfobacca acetoxidans DSM
11109]
Length = 296
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 24/262 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G + +L Q+ R + G V F P + +
Sbjct: 5 VTGGTGFVGKEVVRQLLAHNHQVRCLVRPG-----SEKKLGAAPGVEFAPGDVTRPESLP 59
Query: 83 KAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
A++ + V++L+G REF ++ T + E + +K+ + +++H+SAL A P
Sbjct: 60 SAVQGCDAVVHLVGIIREFPSRGITFQKMHFEATQNIVEATKKANIRRYLHMSALEAKPA 119
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
P ++G +++TK Q E+ V+ TIFRPS +YG GD F+ + + +
Sbjct: 120 P----VAG---YHQTKQQAEEYVMASGLTFTIFRPSIIYGPGDAFINLFKDQIKR-LSLV 171
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260
V G I QPV V VA A + P + + Y GP+ EL+D V+ K
Sbjct: 172 PVIGDGRYQI-QPVPVWVVAQGFALALETPISENRSYDVGGPEPLRFDELIDTVAQVLGK 230
Query: 261 GEPDYGYYRYDLRYDPVMPLKL 282
+ + PV PL+L
Sbjct: 231 --------KVGKIHLPVWPLRL 244
>gi|405117612|gb|AFR92387.1| NADH dehydrogenase [Cryptococcus neoformans var. grubii H99]
Length = 375
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 28/243 (11%)
Query: 23 VFGASGYMGSYLCNKL---GKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP-----YH 74
V +G++GSY+ L + QI+ + + + LG + P
Sbjct: 23 VLVGAGFLGSYVAKALIADPRNRIQIVSRHPQSLHS-----KLSTLGAQILPPASVDITS 77
Query: 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
+ E+RKA + ++ V++L G + + + R+ + E GV + + ISA
Sbjct: 78 SSSVQELRKAFEGASAVVSLAGL-LVGSDKQMKALQEDGARRVGEAASEEGVGRVVDISA 136
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ A+P G + ++RTK +GE + P AT+ RPS ++G GD F + + +
Sbjct: 137 IGANPQ-------GVTAYWRTKAKGEDAIREYHPTATVIRPSLLFGPGDSFFSRFATLAK 189
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD-----PDAAGKIYQAVGPKRYLLSE 249
+ L V+ G T QPVYVGDVA A+ C+D AG+I +A GP + E
Sbjct: 190 Y-LPFLPVFGGG-ITRFQPVYVGDVARAVEICCRDDPIVVSQVAGRIIEAGGPDIFTYRE 247
Query: 250 LLD 252
+++
Sbjct: 248 MME 250
>gi|399994718|ref|YP_006574958.1| NAD dependent epimerase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398659273|gb|AFO93239.1| putative NAD dependent epimerase [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 329
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K+G ++ + R + ++ G GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMYVKPYGVPGQVEPVLCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ ++ ++ V+N +G E F A+ R+AR++ + GV +H+SA+ A
Sbjct: 63 SVAAVMQGADAVVNCVGILNELGKNTFDAVQADGA--DRIARIAADQGVSTMVHVSAIGA 120
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
D + + Y ++K GE VL PEA I RPS ++G+ D+F + M R
Sbjct: 121 DQDSDSAY-------AQSKAAGETAVLTHMPEAVILRPSIIFGAEDQFFNRFAAMTR 170
>gi|353328625|ref|ZP_08970952.1| NADH-ubiquinone oxidoreductase, putative, partial [Wolbachia
endosymbiont wVitB of Nasonia vitripennis]
Length = 320
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 10/233 (4%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+FG +G++G ++ +L G I I R L+LCG+LGQ+ N+ I
Sbjct: 10 VIFGGTGFIGKHIVRRLAAAGYLIRIFTRDQ-EKAACLKLCGNLGQISILEGDFFNEKSI 68
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
++++ +VVINL+G + + + +V I R+A+ ++ V IH SA+ + +
Sbjct: 69 LESMEGCDVVINLVGILYEKRKYDFYTVHVGIAERIAKAAQIKNVSMMIHFSAMGIENDK 128
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
S++ ++K +GEK V F A I +PS ++G D F + + + L
Sbjct: 129 L-------SKYAQSKLKGEKAVASAFQGAMIIKPSLVFGKEDNFFNKFARLA-TILPFLP 180
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ G T QP+ V ++A + KIY G K Y LL +
Sbjct: 181 LIGSG-ITKFQPICVTNLAEVVYRIISFNKQDKKIYNIGGSKVYSFKSLLKFI 232
>gi|257052375|ref|YP_003130208.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM
12940]
gi|256691138|gb|ACV11475.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM
12940]
Length = 291
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 126/284 (44%), Gaps = 47/284 (16%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G G++G +LC +L ++G + R D + D + + R+ I
Sbjct: 5 VTGGDGFVGRHLCAELDERGHDVTALSRDP-----DPTVLPDGVETVAGDVTDRS--SIE 57
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPAR--------LARLSKEMGVEKFIHISA 134
A++ +V++NL+ A I E+ R L +++ GVE+F+ +SA
Sbjct: 58 PAVEGVDVLVNLV----ALSPLFIPSGGNEMHERIHLGGTENLVAAAEDEGVERFVQMSA 113
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L ADP PT+YI R K + E+ V + I RPS ++G G +F+ + +
Sbjct: 114 LGADPEGPTHYI-------RAKGRAEEVVRESALKWVIVRPSVIFGDGGEFVGFTKKLTP 166
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ +A G +T QP++V D+A + +D + AG+ Y+ GP+R L ++
Sbjct: 167 PL---VAPLPGGGKTRFQPIWVEDLAPMLADCVEDDERAGETYELGGPERLTLKQIAK-- 221
Query: 255 HVVMKKGEPDYGYYRYDLRYDPV-MPLK---LFINGLFPGYPMG 294
R + PV M L L + G PG+PMG
Sbjct: 222 ------------LVRGKVAVVPVPMALAGVGLSVAGAIPGFPMG 253
>gi|448304618|ref|ZP_21494554.1| NAD-dependent epimerase/dehydratase [Natronorubrum sulfidifaciens
JCM 14089]
gi|445589999|gb|ELY44220.1| NAD-dependent epimerase/dehydratase [Natronorubrum sulfidifaciens
JCM 14089]
Length = 306
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 26/233 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
V G +G++G+ LC++L ++G ++ R G+ GD+ D
Sbjct: 5 VAGGTGFIGTALCSELHERGYEVTALARDPRGSDLPAGVETATGDVSAY----------D 54
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIAD---ANVEIPARLARLSKEMGVEKFIHISALN 136
I + + V+NL+ K D ++ L R +++ V++F+ +SAL
Sbjct: 55 SIAGTVADHDAVVNLVALSPLYKPPAGVDHETVHLGGTVNLVRAAEDGDVDRFVQMSALG 114
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
ADPN T YI R K E V E TIFRPS ++G G +F+ + +
Sbjct: 115 ADPNGDTDYI-------RAKGDAEAVVRDSHLEWTIFRPSVVFGEGAEFVEFTKQLTTPY 167
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
L G +T QP++VGD+ + A +DP G+IY+ GP+ L++
Sbjct: 168 VTGL---PGGGKTRFQPIWVGDLVPMLADALEDPTHVGEIYEIAGPQIVTLAD 217
>gi|300710359|ref|YP_003736173.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|448294683|ref|ZP_21484762.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|299124042|gb|ADJ14381.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|445586360|gb|ELY40642.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
Length = 289
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 26/233 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G +LC KL ++G +DV L D + R D R
Sbjct: 5 VTGGTGFIGRHLCAKLAQRG-----------HDVTALARSPDASSLPADVAVERGDVTDR 53
Query: 83 KAIKYS--NVVINLIGRE--FATK-NFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ ++ +VV+NL+ F K T +++ + ++ GV + + +SAL A
Sbjct: 54 GTLDFAGQDVVVNLVALSPLFEPKGEKTHESVHLDGTRNVVDAAEAAGVSRLVQMSALGA 113
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DP+ PT YI R K + E+ V + TIFRPS ++G G +F+ + + V
Sbjct: 114 DPDGPTAYI-------RAKGKAERVVEASELDWTIFRPSVVFGDGGEFVEFTRKLTPPV- 165
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+A G T QP++V D+A+ + A +D G+ Y+ GP+ ++E+
Sbjct: 166 --IAPLPGGGRTRFQPIWVEDIASLLADAVEDERHVGETYEIGGPEVLTMAEV 216
>gi|226940410|ref|YP_002795484.1| NADH-ubiquinone oxidoreductase [Laribacter hongkongensis HLHK9]
gi|226715337|gb|ACO74475.1| Probable NADH-ubiquinone oxidoreductase [Laribacter hongkongensis
HLHK9]
Length = 322
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 27/275 (9%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYR--GNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ G G++GS+L +L + G + +I R + R +G + D
Sbjct: 8 ALLGGGGFIGSWLTERLTETGKETVILTRRPDHAASARIFPTAEIVG------VDACDTD 61
Query: 80 EIRKAIKYSNVVINLIGREFATK-NFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + + + V+NL+G ++ F A + I A A ++ G+E+++H+SAL A
Sbjct: 62 ALSQVLAGCDAVVNLVGILHGSRAQFEKAHVALTISALAA--CRQAGIERYLHVSALGAA 119
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
+ P+ Y ++K E V + TIFRPS ++G D+FL + + +
Sbjct: 120 ADSPSLY-------QQSKAAAEAHVRASALKWTIFRPSVLFGPQDRFLNLFARLQASLP- 171
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
+ G QPV+VGDVA A+ +A + G+ + GP L EL+++ +
Sbjct: 172 --CLPLAGAGCRFQPVWVGDVARALGSALELDTTVGQTLELAGPDILTLRELVEYVGELT 229
Query: 259 KKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPM 293
P D + L+ + L PG P+
Sbjct: 230 GNERPVISL------PDSLAMLQAGLMELLPGEPL 258
>gi|167717646|ref|ZP_02400882.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei DM98]
Length = 236
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 114/246 (46%), Gaps = 23/246 (9%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
G + G +G++GS L N L G+ + I R + L D+ V +
Sbjct: 1 MQGQTIAMLGGTGFIGSRLVNVLVGAGAHVRIGARRREHARHLATLPVDI--VELSAFDV 58
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADA----NVEIPARLARLSKEMGVEKFIH 131
R E+ + + + +NL+G + +V +PA LA E V + +H
Sbjct: 59 R---ELARFVAGAQAAVNLVGVLRGGHGKPYGEGFERLHVALPAALAAACIEARVPRMLH 115
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGE----KEVLREFPEATIFRPSDMYGSGDKFLR 187
+SAL ADP+ P+ Y+ R+K GE + + TIFRPS ++G GD F+
Sbjct: 116 VSALGADPHAPSMYL-------RSKGDGEIALRAQAAAGALDVTIFRPSIVFGPGDAFVN 168
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + R +F L + + + QPV+VGDVA AI AC G+ Y+ GP+ Y L
Sbjct: 169 TFARLQR-IFPVLPLAMP--DALMQPVHVGDVAQAIANACVRDATRGRTYELGGPRTYRL 225
Query: 248 SELLDW 253
E++ +
Sbjct: 226 EEIVRY 231
>gi|335436817|ref|ZP_08559607.1| NAD-dependent epimerase/dehydratase [Halorhabdus tiamatea SARL4B]
gi|334897410|gb|EGM35545.1| NAD-dependent epimerase/dehydratase [Halorhabdus tiamatea SARL4B]
Length = 291
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 125/284 (44%), Gaps = 47/284 (16%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G G++G +LC +L ++G + R D D + + R+ I
Sbjct: 5 VTGGDGFVGRHLCRELDERGHDVAALSRDP-----DPTALPDGVETVAGDVTDRS--SID 57
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPAR--------LARLSKEMGVEKFIHISA 134
A++ +V++NL+ A I E+ R L +++ GVE+F+ +SA
Sbjct: 58 PALEGVDVLVNLV----ALSPLFIPTGGNEMHERIHLGGTENLVAAAEDEGVERFVQMSA 113
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L ADP+ T+YI R K + E+ V E I RPS ++G G +F+ + +
Sbjct: 114 LGADPDGSTHYI-------RAKGRAEEVVRESALEWVIVRPSVIFGDGGEFVGFTKKLTP 166
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
V L G +T QP++V D+A + +D D AG++Y+ GP++ L ++
Sbjct: 167 PVVAPL---PGGGKTRFQPIWVEDLAPMLADCVEDDDRAGEVYELGGPEQLTLKQIAK-- 221
Query: 255 HVVMKKGEPDYGYYRYDLRYDPV-MPLK---LFINGLFPGYPMG 294
R + PV M L L I G PG+PMG
Sbjct: 222 ------------LVRGRVAVVPVPMALAGVGLSIGGAVPGFPMG 253
>gi|429192597|ref|YP_007178275.1| nucleoside-diphosphate sugar epimerase [Natronobacterium gregoryi
SP2]
gi|448326512|ref|ZP_21515865.1| NAD-dependent epimerase/dehydratase [Natronobacterium gregoryi SP2]
gi|429136815|gb|AFZ73826.1| putative nucleoside-diphosphate sugar epimerase [Natronobacterium
gregoryi SP2]
gi|445611320|gb|ELY65073.1| NAD-dependent epimerase/dehydratase [Natronobacterium gregoryi SP2]
Length = 299
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 42/244 (17%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQII----IPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G+ LC +L ++G + P RG+ + DL + GD+
Sbjct: 5 VAGGAGFIGTNLCTELVERGHDVTALSRTPGRGSIPEEVDLAV-GDVSAY---------- 53
Query: 79 DEIRKAIKYSNVVINLIG----------REFATKNFTIADANVEIPARLARLSKEMGVEK 128
D I A+ + V+NL+ R+ T +V L R ++ VE+
Sbjct: 54 DSIEDAVAGHDAVVNLVSLAPLWEPKGDRDHET-------VHVGGTENLVRAAETHDVER 106
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
F+ +SAL A+P+ T YI R K + E+ V E TIFRPS ++G G +F+ +
Sbjct: 107 FLQMSALGANPDGDTAYI-------RAKGRAEEVVRDSSLEWTIFRPSVVFGDGGEFVAF 159
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ L G ET QP++VGD+ + +D D G Y+ GP+ L+
Sbjct: 160 TKTLTTPYVTGL---PGGGETRFQPIWVGDLVPMLADVFEDDDHVGGTYEVGGPQVVTLA 216
Query: 249 ELLD 252
++ +
Sbjct: 217 DVTE 220
>gi|188590990|ref|YP_001795590.1| NADH dehydrogenase [Cupriavidus taiwanensis LMG 19424]
gi|170937884|emb|CAP62868.1| putative NADH dehydrogenase [Cupriavidus taiwanensis LMG 19424]
Length = 340
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 110/253 (43%), Gaps = 36/253 (14%)
Query: 23 VFGASGYMGSYLCNKL-------------GKQGSQIIIPYR-----GNFYDVRDLRLCGD 64
V G +G++GS+L ++L G I P R N + L L
Sbjct: 8 VIGGAGFIGSHLVSRLAGAASASGAPLEAGANPDSPIAPDRIVVGTRNVEHAQHLLLLPR 67
Query: 65 LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATK----NFTIADANVEIPARLARL 120
+ V D+ ++ +V+NL+G + A A+VE+ ++
Sbjct: 68 VEVVELGLADNAALDDAIGSLGVDGIVVNLVGVLHGERADPYGEAFASAHVELVRQIVAS 127
Query: 121 SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYG 180
GV + +H+SAL AD N P+ Y+ R+K GE+ V + TIFRPS ++G
Sbjct: 128 CLSTGVRRLLHMSALGADSNGPSMYL-------RSKGDGERIVRASGLDWTIFRPSVVFG 180
Query: 181 SGDKFLRYYGHMWRHVFRKLA--VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
D FL + HM ++LA V QPV+V DV A + A +P G Y+
Sbjct: 181 PDDHFLNLFAHM-----QQLAPVVPLACAHARFQPVFVQDVVQAFLNAMVNPATIGHGYE 235
Query: 239 AVGPKRYLLSELL 251
GP+ Y L EL+
Sbjct: 236 LGGPQVYTLEELV 248
>gi|353237940|emb|CCA69901.1| related to putative nucleoside-diphosphate-sugar
epimerase-Coprinellus disseminatus [Piriformospora
indica DSM 11827]
Length = 282
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 52/290 (17%)
Query: 22 TVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
V +G++G+Y+ G QI++ R V DL+ + N
Sbjct: 3 VVICGAGFIGNYVARAFAASNPGIQIVLASRQPKRHVDDLQ--DAHAHISSASADVTNAS 60
Query: 80 EIRKAIKYSNVVINLIG------REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
+R + ++ V++L+G +F + A +A+ ++E+G K +H+S
Sbjct: 61 TLRPVFQDAHTVVSLVGILQGSPAKFEAVQWKGAQ-------NVAQCAQEVGA-KLVHLS 112
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
A+ A NP + +S RTK GEK VL P AT+ RPS ++G GD F + +
Sbjct: 113 AIGA--NPDSELVS-----PRTKGLGEKAVLEAAPTATVIRPSLVFGPGDSFFTRFATLA 165
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAI-VAACKDPDAA------GKIYQAVGPKRYL 246
R F + V G QPVYVGD+A I V + DA+ GKI +A GP+ +
Sbjct: 166 RF-FPVMPVIGSGMSKF-QPVYVGDLAKLIEVCSRSKGDASIAKKVDGKILEAGGPEVFT 223
Query: 247 LSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHL 296
E+L ++Y R+ P++P+ L+ GY G L
Sbjct: 224 FREILQL-------------VFKYSGRWRPMVPIPLWA-----GYMQGAL 255
>gi|167917150|ref|ZP_02504241.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei BCC215]
Length = 319
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 114/246 (46%), Gaps = 23/246 (9%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
G + G +G++GS L N L G+ + I R + L D+ V +
Sbjct: 1 MQGQTIAMLGGTGFIGSRLVNVLVGAGAHVRIGARRREHARHLATLPVDI--VELSAFDV 58
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADA----NVEIPARLARLSKEMGVEKFIH 131
R E+ + + + +NL+G + +V +PA LA E V + +H
Sbjct: 59 R---ELARFVAGAQAAVNLVGVLRGGHGRPYGEGFERLHVALPAALAAACIEARVPRMLH 115
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGE----KEVLREFPEATIFRPSDMYGSGDKFLR 187
+SAL ADP+ P+ Y+ R+K GE + + TIFRPS ++G GD F+
Sbjct: 116 VSALGADPHAPSMYL-------RSKGDGEIALRAQAAAGALDVTIFRPSIVFGPGDAFVN 168
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + R +F L + + + QPV+VGDVA AI AC G+ Y+ GP+ Y L
Sbjct: 169 TFARLQR-IFPVLPLAMP--DALMQPVHVGDVAQAIANACVRDATRGRTYELGGPRTYRL 225
Query: 248 SELLDW 253
E++ +
Sbjct: 226 EEIVRY 231
>gi|91203184|emb|CAJ72823.1| similar to dehydratase OleE [Streptomyces antibioticus] [Candidatus
Kuenenia stuttgartiensis]
Length = 297
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 29/243 (11%)
Query: 25 GASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD---LGQVLFQPYHPRNDDE- 80
G++G++G L NKL + N Y V+ L G LGQ + Q D
Sbjct: 7 GSTGFVGKQLLNKLIE-----------NKYKVKCLVRKGSEHKLGQYINQIEVVNGDITD 55
Query: 81 ---IRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
++ AI VIN++G RE K T + E L R +K+ GV++FI +SAL
Sbjct: 56 PPCLKNAIADCEAVINIVGIIREIPGKGVTFEKLHYEGTHNLIREAKKQGVDRFIQMSAL 115
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
A T Y +TK+ E+ + + TIFRPS ++G DKF+ + M +
Sbjct: 116 GAKQEGKTLY-------QQTKFLAEECIRKSGLNYTIFRPSIIFGKEDKFVNTFAGMLK- 167
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ + + V G+ + QPV V +V AA V + + D GK Y+ GP++ +++++
Sbjct: 168 IQQFIPVIGDGKYKL-QPVAVENVVAAFVDSIERRDTFGKSYEVGGPEKIEFNDIINIIG 226
Query: 256 VVM 258
V+
Sbjct: 227 KVL 229
>gi|53717904|ref|YP_106890.1| hypothetical protein BPSL0263 [Burkholderia pseudomallei K96243]
gi|67641529|ref|ZP_00440306.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei GB8 horse 4]
gi|121598644|ref|YP_994279.1| putative NADH-ubiquinone oxidoreductase [Burkholderia mallei SAVP1]
gi|124384535|ref|YP_001028071.1| NADH-ubiquinone oxidoreductase [Burkholderia mallei NCTC 10229]
gi|126449769|ref|YP_001082879.1| NADH-ubiquinone oxidoreductase [Burkholderia mallei NCTC 10247]
gi|126453488|ref|YP_001064553.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1106a]
gi|134283663|ref|ZP_01770362.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 305]
gi|167001522|ref|ZP_02267317.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei PRL-20]
gi|167736688|ref|ZP_02409462.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 14]
gi|167813787|ref|ZP_02445467.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 91]
gi|167843894|ref|ZP_02469402.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei B7210]
gi|167892396|ref|ZP_02479798.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 7894]
gi|167900892|ref|ZP_02488097.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei NCTC 13177]
gi|167909111|ref|ZP_02496202.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 112]
gi|217425018|ref|ZP_03456514.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 576]
gi|237810449|ref|YP_002894900.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei MSHR346]
gi|242318016|ref|ZP_04817032.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1106b]
gi|254174942|ref|ZP_04881603.1| putative NADH-ubiquinone oxidoreductase [Burkholderia mallei ATCC
10399]
gi|254188079|ref|ZP_04894591.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei Pasteur 52237]
gi|254196325|ref|ZP_04902749.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei S13]
gi|254201887|ref|ZP_04908251.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei FMH]
gi|254207220|ref|ZP_04913571.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei JHU]
gi|254295804|ref|ZP_04963261.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 406e]
gi|254359723|ref|ZP_04975994.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei 2002721280]
gi|403516921|ref|YP_006651054.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei BPC006]
gi|52208318|emb|CAH34251.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|121227454|gb|ABM49972.1| putative NADH-ubiquinone oxidoreductase [Burkholderia mallei SAVP1]
gi|124292555|gb|ABN01824.1| putative NADH-ubiquinone oxidoreductase [Burkholderia mallei NCTC
10229]
gi|126227130|gb|ABN90670.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1106a]
gi|126242639|gb|ABO05732.1| putative NADH-ubiquinone oxidoreductase [Burkholderia mallei NCTC
10247]
gi|134245072|gb|EBA45167.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 305]
gi|147747781|gb|EDK54857.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei FMH]
gi|147752762|gb|EDK59828.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei JHU]
gi|148028937|gb|EDK86869.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei 2002721280]
gi|157806226|gb|EDO83396.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 406e]
gi|157935759|gb|EDO91429.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei Pasteur 52237]
gi|160695987|gb|EDP85957.1| putative NADH-ubiquinone oxidoreductase [Burkholderia mallei ATCC
10399]
gi|169653068|gb|EDS85761.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei S13]
gi|217392038|gb|EEC32064.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 576]
gi|237505392|gb|ACQ97710.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei MSHR346]
gi|238522477|gb|EEP85921.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei GB8 horse 4]
gi|242141255|gb|EES27657.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1106b]
gi|243062726|gb|EES44912.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei PRL-20]
gi|403072565|gb|AFR14145.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei BPC006]
Length = 319
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 23/246 (9%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
G + G +G++GS L N L G+ + I R + L D+ V +
Sbjct: 1 MQGQTIAMLGGTGFIGSRLVNVLVGAGAHVRIGARRREHARHLATLPVDI--VELSAFDV 58
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFT--IADANVEIPARLARLSKEMGVEKFIH 131
R E+ + + + +NL+G R K + +V +PA LA E V + +H
Sbjct: 59 R---ELARFVAGAQAAVNLVGVLRGGHGKPYGEGFERLHVALPAALAAACIEARVPRMLH 115
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGE----KEVLREFPEATIFRPSDMYGSGDKFLR 187
+SAL ADP+ P+ Y+ R+K GE + + TIFRPS ++G GD F+
Sbjct: 116 VSALGADPHAPSMYL-------RSKGDGEIALRAQAAAGALDVTIFRPSIVFGPGDAFVN 168
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + R +F L + + + QPV+VGDVA AI AC G+ Y+ GP+ Y L
Sbjct: 169 TFARLQR-IFPVLPLAMP--DALMQPVHVGDVAQAIANACVRDATRGRTYELGGPRTYRL 225
Query: 248 SELLDW 253
E++ +
Sbjct: 226 EEIVRY 231
>gi|288817824|ref|YP_003432171.1| NADH dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|384128585|ref|YP_005511198.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus
TK-6]
gi|288787223|dbj|BAI68970.1| NADH dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|308751422|gb|ADO44905.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus
TK-6]
Length = 313
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 24/237 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE-- 80
+ G++G++G Y+ L +G ++ R N +R RL G+ + Y +D+
Sbjct: 5 ITGSTGFVGRYMVKALLNEGFEVASIVR-NLDKLR--RLYGEK----VKGYEGNFEDKAS 57
Query: 81 IRKAIK--YSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
IRKA + + +I+LIG E +K T + L +++KE ++K +H+SAL
Sbjct: 58 IRKAFEDFKPDYLIHLIGILYEEKSKGITFHKVHYIYSKNLYQVAKEFDIKKVLHMSALG 117
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
N P S +++TKYQ E+E+++ TIFRPS + G R + MW
Sbjct: 118 THKNAP-------SSYHKTKYQTEQELIKTGLNYTIFRPSIILGPEQ---RLFFDMWSIT 167
Query: 197 -FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ ++ G + QPV V DV + A K + GKIY+ G K+ +LL+
Sbjct: 168 RYLRVIALPSGGHYLFQPVDVRDVVCCFLKAIKSEETNGKIYEVCGDKKVSFKKLLE 224
>gi|313680419|ref|YP_004058158.1| nad-dependent epimerase/dehydratase [Oceanithermus profundus DSM
14977]
gi|313153134|gb|ADR36985.1| NAD-dependent epimerase/dehydratase [Oceanithermus profundus DSM
14977]
Length = 288
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 36/238 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ G SG++G++L L G ++ R G VR L D GQ L
Sbjct: 5 LVGGSGFLGTHLARALLAAGHEVAALSRRGAGPLAGVRYLAGNADRGQGL---------- 54
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+A++ ++ V+ L G RE T +V R+ GV + +H+SAL A
Sbjct: 55 ---EAVRAADAVVYLAGIIRE---GEQTYEAVHVRGVRRVLEAMAAAGVRRIVHVSALGA 108
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
P+ P S+++ +K +GE V E TIFRP ++G GD F +G + R +
Sbjct: 109 RPDAP-------SRYHASKARGEALVQASGLEWTIFRPGLIFGEGDAF---FGGVLRDLV 158
Query: 198 RK----LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
R + + G + PV+ GDVAAA + A + P G+ Y VGP Y EL+
Sbjct: 159 RLPLPFVPLVGAGGYPFR-PVWAGDVAAATLQALQRPRTVGRRYDLVGPHEYTYRELV 215
>gi|345873102|ref|ZP_08825022.1| NAD-dependent epimerase/dehydratase [Thiorhodococcus drewsii AZ1]
gi|343917586|gb|EGV28381.1| NAD-dependent epimerase/dehydratase [Thiorhodococcus drewsii AZ1]
Length = 302
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 19/234 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE 80
V G +G++G +L N+L + G S++ + F R LRL + V + + + +
Sbjct: 9 VLGGTGFVGQHLLNRLSRAGIRSRVATAHPHRF---RALRLIPNCEIVELRDW---SHEG 62
Query: 81 IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
+ ++++ + +INL+G ++V + + + + GV +F+ +SALNAD
Sbjct: 63 LARSMEGCDALINLVGILNPGSGRGFEASHVRLVEHATQAALDAGVGRFLQMSALNADAE 122
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEA---TIFRPSDMYGSGDKFLRYYGHMWRHVF 197
G S++ RTK +GE T FRPS ++G GD F + + +
Sbjct: 123 ------KGPSEYLRTKGRGEAMAHAAAARGLAVTSFRPSVIFGRGDSFFNRFARLLHLLP 176
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ E+ PVYVGDV A+V + D GK Y+ GP+ + L +L+
Sbjct: 177 GPFPL--ACAESRFAPVYVGDVIEAMVKSLGDSATHGKAYELCGPRVFSLRDLV 228
>gi|126438876|ref|YP_001057311.1| NAD-dependent epimerase/dehydratase [Burkholderia pseudomallei 668]
gi|126218369|gb|ABN81875.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 668]
Length = 320
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 114/246 (46%), Gaps = 23/246 (9%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
G + G +G++GS L N L G+ + I R + L D+ V +
Sbjct: 1 MQGQTIAMLGGTGFIGSRLVNVLVGAGAHVRIGARRREHARHLATLPVDI--VELSAFDV 58
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADA----NVEIPARLARLSKEMGVEKFIH 131
R E+ + + + +NL+G + +V +PA LA E V + +H
Sbjct: 59 R---ELARFVAGAQAAVNLVGVLRGGHGKPYGEGFERLHVALPAALAAACIEARVPRMLH 115
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGE----KEVLREFPEATIFRPSDMYGSGDKFLR 187
+SAL ADP+ P+ Y+ R+K GE + + TIFRPS ++G GD F+
Sbjct: 116 VSALGADPHAPSMYL-------RSKGDGEIALRAQAAAGALDVTIFRPSIVFGPGDAFVN 168
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + R +F L + + + QPV+VGDVA AI AC G+ Y+ GP+ Y L
Sbjct: 169 TFARLQR-IFPVLPLAMP--DALMQPVHVGDVAQAIANACVRDATRGRTYELGGPRTYRL 225
Query: 248 SELLDW 253
E++ +
Sbjct: 226 EEIVRY 231
>gi|170696053|ref|ZP_02887190.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
gi|170139045|gb|EDT07236.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
Length = 221
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 10/141 (7%)
Query: 113 IPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATI 172
+P ++A + GV + IH+SAL AD N G S + R+K GEK V T+
Sbjct: 1 MPTKIAAACEGKGVHRLIHLSALGADSN-------GRSMYARSKGDGEKAVHAANLAWTV 53
Query: 173 FRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA 232
FRPS ++G+ D+FL + + R +F + + + QPVYVGDVA AIV A
Sbjct: 54 FRPSVVFGAEDQFLNKFAFLQR-IFPVIPLAMPDAKF--QPVYVGDVAKAIVNVLDLDAA 110
Query: 233 AGKIYQAVGPKRYLLSELLDW 253
GK Y+ GP Y L EL+ +
Sbjct: 111 NGKTYELGGPSVYTLEELVRY 131
>gi|46201484|ref|ZP_00054963.2| COG0702: Predicted nucleoside-diphosphate-sugar epimerases
[Magnetospirillum magnetotacticum MS-1]
Length = 317
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 59 LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLA 118
L+ GD+GQV N + A+ + V+N++G + + T +V+ A +A
Sbjct: 25 LKTMGDVGQVTPLRADITNPKSVAMAVAGVDAVVNVVGILYESGRATFDAIHVKGAANVA 84
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
+K GV + +H+SAL AD N Y R+K GE+ VL FP A+I RPS +
Sbjct: 85 AAAKAAGVGRLVHLSALGADKNSEAAY-------ARSKALGEEAVLAAFPGASIVRPSVV 137
Query: 179 YGSGDKFLRYYGHMWR-----HVFRKLAVYKKGEET------------IKQPVYVGDVAA 221
+G D F +G + VF +E+ I QPV V DVA
Sbjct: 138 FGPDDDFFNRFGKLAMISPVLPVFTADGFKPVCDESGCSIDLFGSGGPIFQPVSVADVAQ 197
Query: 222 AIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
A+V +D AGK ++ GP+RY + E+++
Sbjct: 198 AVVQMLEDGRHAGKTFELGGPRRYSMKEIMEL 229
>gi|163747580|ref|ZP_02154929.1| NAD-dependent epimerase/dehydratase [Oceanibulbus indolifex HEL-45]
gi|161379177|gb|EDQ03597.1| NAD-dependent epimerase/dehydratase [Oceanibulbus indolifex HEL-45]
Length = 327
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 18/233 (7%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG +G++GS + L + G ++ I R D +L G + P+ +
Sbjct: 8 TVFGGTGFLGSRVVRHLLRDGHRVRIAARHPTSD-PELSDSGRAETARADLFKPKT---L 63
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
A+ ++ V+N + T +V+ ARLA L+ G+ F+ +S + +DP+
Sbjct: 64 SAALNGADGVVNATSLYVEKGDLTYHAVHVDAAARLATLANRAGIRSFVQLSGIGSDPDA 123
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
YI R + +GE V P AT+ RP+ M+G D L + V R L
Sbjct: 124 ENSYI-------RARGRGETAVQAALPSATVIRPAVMFGDSDALL----GTIQAVARSLP 172
Query: 202 VYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
VY T+ QP + DVA AI D+ Y+ VG EL++
Sbjct: 173 VYPLFGAGGTLLQPAWAQDVARAI-GKLLVSDSGAPCYELVGADTLTYCELVE 224
>gi|254182149|ref|ZP_04888746.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1655]
gi|184212687|gb|EDU09730.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1655]
Length = 319
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 23/246 (9%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
G + G +G++GS L N L G+ + I R + L D+ V +
Sbjct: 1 MQGQTIAMLGGTGFIGSRLVNVLVGAGAHVRIGARRREHARHLATLPVDI--VELSAFDV 58
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFT--IADANVEIPARLARLSKEMGVEKFIH 131
R E+ + + + +NL+G R K + +V +PA LA E V + +H
Sbjct: 59 R---ELARFVAGAQAAVNLVGVLRGGHGKPYGEGFERLHVALPAALAAACIEARVPRMLH 115
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGE----KEVLREFPEATIFRPSDMYGSGDKFLR 187
+SAL ADP+ P+ Y+ R+K GE + + TIFRPS ++G GD F+
Sbjct: 116 VSALGADPHAPSMYL-------RSKGDGEIALRAQAAAGALDVTIFRPSIVFGPGDAFVN 168
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + R +F L + + + QPV+VGDVA A+ AC G+ Y+ GP+ Y L
Sbjct: 169 TFARLQR-IFPVLPLAMP--DALMQPVHVGDVAQAVANACVRDATRGRTYELGGPRTYRL 225
Query: 248 SELLDW 253
E++ +
Sbjct: 226 EEIVRY 231
>gi|300121227|emb|CBK21608.2| unnamed protein product [Blastocystis hominis]
Length = 190
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
Query: 124 MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-FPEATIFRPSDMYGSG 182
M +H+SAL + + S++ RTK + +K VLRE P A I RP+DM+
Sbjct: 1 MDKSNLLHVSALQQN-------LKHRSEWARTKAKSDK-VLREVMPSACIVRPADMFSED 52
Query: 183 DKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA-AGKIYQAVG 241
D+ L + G H+ L G +KQPV++GDVA AI +C PDA AGK + G
Sbjct: 53 DRLLTWIGSQ-LHIDPWLININDG-SALKQPVWMGDVATAIRKSCMTPDAFAGKTMELAG 110
Query: 242 PKRYLLSELLDWFH 255
P+ L ++ + WF
Sbjct: 111 PEVILWADRVAWFQ 124
>gi|388581588|gb|EIM21896.1| NAD(P)-binding protein [Wallemia sebi CBS 633.66]
Length = 313
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 119/236 (50%), Gaps = 32/236 (13%)
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
D +R ++ S+ VIN +G A++ T E +AR+++E K + ISA+ AD
Sbjct: 23 DSLRGVLEGSDAVINTVGLLQASRK-TFEAVQHEGAENVARITRENNA-KLVQISAIGAD 80
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV-F 197
S + RTK GE+ L E P+ +I RPS ++G GD F + + +++ F
Sbjct: 81 -------ASSRLPYPRTKALGEQAALSECPDCSIVRPSLIFGPGDSFFNRFAWLAKYMPF 133
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA--------AGKIYQAVGPKRYLLSE 249
L V+ G ET+ QPVYVGDVAAA VA C + + GKI +A GP+ + +
Sbjct: 134 --LPVFGTG-ETLFQPVYVGDVAAA-VALCAESRSDERIATRVNGKITEAGGPEVFTYRQ 189
Query: 250 LLDWFHVVMKKGEPDYGYYRYDLRYDP--VMPLKLFINGLFPGYPMGHLTPERVER 303
++ +V+ DY + + P + ++ F+ P P+ +T ++VE+
Sbjct: 190 IM---QLVI-----DYSGNKRPIVSIPWSIAKMQAFVLENLPMPPVLSITRDQVEQ 237
>gi|117924284|ref|YP_864901.1| NAD-dependent epimerase/dehydratase [Magnetococcus marinus MC-1]
gi|117608040|gb|ABK43495.1| NAD-dependent epimerase/dehydratase [Magnetococcus marinus MC-1]
Length = 294
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 26/235 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQI-----IIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN 77
+ GA+G++G L +L +G +I IP R V+ + GD+ +
Sbjct: 4 ITGATGFVGQALIQQLVSEGHKIRALARHIPARHAPEGVQ--YVAGDI----------QI 51
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
++ A++ VI+L+G ++ + + + + + + +K+ GV++F+H+S+L
Sbjct: 52 PSSLQTAMEGVTCVIHLVGILAEQRHRSFEEIHHQGTLNVLQAAKQAGVKRFLHMSSLGT 111
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
N Y +++K+Q E V + TIFRPS ++G GD F+ + M R F
Sbjct: 112 RANAVARY-------HQSKWQAECAVRESGLDYTIFRPSVIFGPGDNFVNQFARMIR--F 162
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ + QP+ VGDVA A D G+ Y+ GP++ E+++
Sbjct: 163 SPMVPILGDGQNRMQPIAVGDVARCFAIALTDRQTLGQTYELGGPQQLTFQEIME 217
>gi|357030912|ref|ZP_09092856.1| putative oxidoreductase [Gluconobacter morbifer G707]
gi|356415606|gb|EHH69249.1| putative oxidoreductase [Gluconobacter morbifer G707]
Length = 320
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 13/237 (5%)
Query: 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN 77
G V G G++G L ++L +G + + R D L G+ G+V F +
Sbjct: 12 GRTVAVLGGGGFIGRTLVSRLVARGHVVRVGGRHPERDQDLAHLPGE-GRVEFVRASVTD 70
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ +R+ + +NL+ + + NV+ A+++++ GV+ ++H+SA+ A
Sbjct: 71 RESLRQLFIGAEAAVNLVS-IMSPDTRELHRINVDGAQCTAQMAQQAGVKHYVHMSAIGA 129
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
P Y R+K EK V FP A + RPS ++G D FL + M + V
Sbjct: 130 SRTSPASY-------GRSKGWAEKVVRDVFPTAGLLRPSVVFGPEDSFLNMFALMAK-VS 181
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
L V+ G T QPVYV DVA A + + + AG+ +A GP+ + EL+ +
Sbjct: 182 PVLPVF--GARTHFQPVYVNDVADAAIRLLAEEN-AGRTVEAGGPEVLTMRELMTFI 235
>gi|53724553|ref|YP_104785.1| NADH-ubiquinone oxidoreductase [Burkholderia mallei ATCC 23344]
gi|386863280|ref|YP_006276229.1| nucleoside-diphosphate-sugar epimerase [Burkholderia pseudomallei
1026b]
gi|418392700|ref|ZP_12968460.1| nucleoside-diphosphate-sugar epimerase [Burkholderia pseudomallei
354a]
gi|418539291|ref|ZP_13104887.1| nucleoside-diphosphate-sugar epimerase [Burkholderia pseudomallei
1026a]
gi|418545316|ref|ZP_13110573.1| nucleoside-diphosphate-sugar epimerase [Burkholderia pseudomallei
1258a]
gi|418548513|ref|ZP_13113624.1| nucleoside-diphosphate-sugar epimerase [Burkholderia pseudomallei
1258b]
gi|418558224|ref|ZP_13122790.1| nucleoside-diphosphate-sugar epimerase [Burkholderia pseudomallei
354e]
gi|52427976|gb|AAU48569.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia mallei ATCC
23344]
gi|385345915|gb|EIF52608.1| nucleoside-diphosphate-sugar epimerase [Burkholderia pseudomallei
1026a]
gi|385346252|gb|EIF52938.1| nucleoside-diphosphate-sugar epimerase [Burkholderia pseudomallei
1258a]
gi|385357824|gb|EIF63860.1| nucleoside-diphosphate-sugar epimerase [Burkholderia pseudomallei
1258b]
gi|385363212|gb|EIF68992.1| nucleoside-diphosphate-sugar epimerase [Burkholderia pseudomallei
354e]
gi|385375097|gb|EIF79890.1| nucleoside-diphosphate-sugar epimerase [Burkholderia pseudomallei
354a]
gi|385660408|gb|AFI67831.1| nucleoside-diphosphate-sugar epimerase [Burkholderia pseudomallei
1026b]
Length = 312
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 23/239 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++GS L N L G+ + I R + L D+ V + R E+
Sbjct: 1 MLGGTGFIGSRLVNVLVGAGAHVRIGARRREHARHLATLPVDI--VELSAFDVR---ELA 55
Query: 83 KAIKYSNVVINLIGREFATKNFTIADA----NVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + + +NL+G + +V +PA LA E V + +H+SAL AD
Sbjct: 56 RFVAGAQAAVNLVGVLRGGHGKPYGEGFERLHVALPAALAAACIEARVPRMLHVSALGAD 115
Query: 139 PNPPTYYISGGSQFYRTKYQGE----KEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
P+ P+ Y+ R+K GE + + TIFRPS ++G GD F+ + + R
Sbjct: 116 PHAPSMYL-------RSKGDGEIALRAQAAAGALDVTIFRPSIVFGPGDAFVNTFARLQR 168
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+F L + + + QPV+VGDVA AI AC G+ Y+ GP+ Y L E++ +
Sbjct: 169 -IFPVLPLAMP--DALMQPVHVGDVAQAIANACVRDATRGRTYELGGPRTYRLEEIVRY 224
>gi|395764900|ref|ZP_10445520.1| hypothetical protein MCO_00396 [Bartonella sp. DB5-6]
gi|395413717|gb|EJF80179.1| hypothetical protein MCO_00396 [Bartonella sp. DB5-6]
Length = 332
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 12/240 (5%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G ++ L K+G ++ I R L++ G++GQ ++ +
Sbjct: 15 TVFGGSGFVGRHVVETLTKRGYRVRIAVRCPQKAYYMLQI-GEVGQTQMLKTDIKHRASV 73
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ ++ + L G T E ++ L+ + G+ I++S L A+
Sbjct: 74 ARALLGADGAVFLPGSLAQTNQSNFQKIQTEGTQNVSELAAKAGIP-LIYMSTLVANQRA 132
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
Y R K+ GE+ V + P+A I RPS ++G D F + R F +
Sbjct: 133 SCLY-------ARVKFMGEQIVQNKHPQAIIMRPSVIFGPEDCFFNTLADLSR--FLPIM 183
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL-DWFHVVMKK 260
G ++ QPVYVGD+A +V A ++ GKIY GP+ +L F ++ +K
Sbjct: 184 PLFGGGQSKLQPVYVGDIAEFVVRALEEHVTFGKIYDLGGPQIMTFQNVLKSIFQIIHRK 243
>gi|148553585|ref|YP_001261167.1| NADH dehydrogenase [Sphingomonas wittichii RW1]
gi|148498775|gb|ABQ67029.1| NADH dehydrogenase [Sphingomonas wittichii RW1]
Length = 312
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 113/223 (50%), Gaps = 17/223 (7%)
Query: 33 YLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI 92
Y+ +L K G+++ + R + D L+ G LGQ F P + A+ ++ VI
Sbjct: 17 YVAQELLKAGARVRVAER-DPSDAWFLKPLGGLGQTQFVPASVIKPATVAAAVAGADSVI 75
Query: 93 NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQF 152
NL+G +F + + A +A +K G E +H+SA+ ADP P+ Y
Sbjct: 76 NLVG--ILKGDFD--SIHRKGAAHVAAAAKAAGAESLVHVSAIGADPESPSAY------- 124
Query: 153 YRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQ 212
R+K QGE V FPEATI RPS ++GS D FL + M F + V + + Q
Sbjct: 125 GRSKGQGEAAVRAAFPEATIVRPSIVFGSEDGFLNRFAAMQSAPF--VPVLRGAVKF--Q 180
Query: 213 PVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWF 254
PV+V DVA AI AA DP A AGK Y+ GP+ ++EL W
Sbjct: 181 PVWVADVARAIAAAALDPGAHAGKTYELGGPEVVTMAELNAWL 223
>gi|95928444|ref|ZP_01311192.1| NAD-dependent epimerase/dehydratase [Desulfuromonas acetoxidans DSM
684]
gi|95135715|gb|EAT17366.1| NAD-dependent epimerase/dehydratase [Desulfuromonas acetoxidans DSM
684]
Length = 297
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 25 GASGYMGSYLCNKLGKQGSQI------IIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
GA+G++G ++ L G + P + V ++ GD+ N
Sbjct: 7 GATGFVGHHVIQALLLNGHTVRCLVRKPTPSLTSLVQVETVQ--GDI----------TNP 54
Query: 79 DEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
E+++A+ + +I+L+G R F + T +VE + + E G+++++H+SA
Sbjct: 55 AELKQAMSDCDAIIHLVGIIRAFPQRGITFEKLHVEATRNIITAAAEAGIDRYLHMSANG 114
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
A P+ P Y + TK++ E+ V + TIFRPS ++G +F R R
Sbjct: 115 ASPDCPEAYGA-------TKWRAEELVRQSRLTWTIFRPSLIFGPDGEFTRMLIQQLR-F 166
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ + G + PV V DVA A P A GKIY GP ++L+D
Sbjct: 167 LPMIPIIGDGHYQLS-PVNVDDVALGFANALSSPQAIGKIYHCCGPDTCSYNDLID 221
>gi|226310652|ref|YP_002770546.1| hypothetical protein BBR47_10650 [Brevibacillus brevis NBRC 100599]
gi|226093600|dbj|BAH42042.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 303
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 127/279 (45%), Gaps = 34/279 (12%)
Query: 25 GASGYMGSYLCNKLGKQGSQIIIPYRGN------FYDVRDLRLCGDLGQVLFQPYHPRND 78
GA+G++G + +L +G + + R F + + + G + +
Sbjct: 7 GATGFVGRGILERLQAEGYETVCLTRAGSTGKLPFTETANPHVTEATGDLF-------DK 59
Query: 79 DEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + +A++ + VI+L+G RE K + + +VE + +K+ G+++ +H+SAL
Sbjct: 60 ESLMRAMQGCDAVIHLVGIIREQPGKGISFSRIHVEGTKNVLDAAKQAGIKRIVHMSALG 119
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
A N S ++RTKY+ E+ V IFRPS ++G GD+F+ + R
Sbjct: 120 ARKN-------ATSAYHRTKYEAEQLVQTSGIPYVIFRPSVIFGPGDEFVNMLADLVR-- 170
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
V G + QPV VA V A P++ + Y+ GP+R ++LD
Sbjct: 171 LPVTPVIGDGSYPL-QPVARKTVADVFVQALSRPESTNQTYETGGPERLSYGQILDTI-- 227
Query: 257 VMKKGEPDYGYYRYDLRYDPVMPLKLFINGL--FPGYPM 293
GE G + + + P+ +K +N + FP +P+
Sbjct: 228 ----GEA-IGKRKVNKIHIPLALMKPVVNMMERFPFFPI 261
>gi|299133296|ref|ZP_07026491.1| NAD-dependent epimerase/dehydratase [Afipia sp. 1NLS2]
gi|298593433|gb|EFI53633.1| NAD-dependent epimerase/dehydratase [Afipia sp. 1NLS2]
Length = 321
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 19/247 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ L ++ ++ + R L+ G +GQ+ + R
Sbjct: 8 LVTVFGGSGFLGRHVVRALAQRDYRLRVGVRRPEL-AGHLQPLGKVGQINPVQANIRYPA 66
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
I A++ ++VV+NL+G E + F A+ + + +H+SA+ A
Sbjct: 67 SIEAAVRGAHVVVNLVGILSEGGAQRFNRVHAHGA---HAIAEAAAKIGARMVHVSAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D N S++ +K GE+ VL P ATI RPS ++G D F + + R +
Sbjct: 124 DVN-------STSRYAVSKAFGEQAVLDAVPGATIIRPSIVFGPEDHFANRFAALAR-LL 175
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
L + G +T QPVYVGDVA AI A G Y+ GP+ + E + ++
Sbjct: 176 PVLPLI--GADTKLQPVYVGDVATAIADAVDGKTKPGAAYELGGPEVVTMREAV---QLI 230
Query: 258 MKKGEPD 264
++ E D
Sbjct: 231 LRIAERD 237
>gi|448355260|ref|ZP_21544013.1| NAD-dependent epimerase/dehydratase [Natrialba hulunbeirensis JCM
10989]
gi|445636025|gb|ELY89190.1| NAD-dependent epimerase/dehydratase [Natrialba hulunbeirensis JCM
10989]
Length = 309
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 27/235 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRG-NFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++GS+ C +L ++G ++ R D L DL Y D I
Sbjct: 5 VAGGTGFIGSHCCTELAERGHEVTSLSRNPTSEDAATLPDEVDLASGDVSDY-----DTI 59
Query: 82 RKAIKYSNVVINLIGRE------FATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ + V+N + T + T+ E L R +++ VE+F+ ISAL
Sbjct: 60 VDTVASHDAVVNFVSLSPLYQPPSGTDHETVHLGGTE---NLVRAAEDGDVERFLQISAL 116
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA-TIFRPSDMYGSGDKFLRYYGHMWR 194
ADP+ PT YI R K + E E++RE TI RPS ++G G +FL + +
Sbjct: 117 GADPDGPTPYI-------RAKGRAE-EIVREAALGWTIVRPSIVFGDGAEFLEFTKQLTT 168
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
L G ET QP++VGD A + +D G+ Y+ G + L++
Sbjct: 169 PYLTGL---PGGGETRFQPIWVGDFAPMLADVLEDDTHVGQTYEIGGSQIVTLAD 220
>gi|448327747|ref|ZP_21517069.1| NAD-dependent epimerase/dehydratase [Natrinema versiforme JCM
10478]
gi|445617376|gb|ELY70974.1| NAD-dependent epimerase/dehydratase [Natrinema versiforme JCM
10478]
Length = 306
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 20/241 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G+ LC +L ++G ++ R + +G V Y D I
Sbjct: 5 VAGGTGFIGTNLCEELAERGHEVTALSRSPDDTGLPDGVESAMGDV--SAY-----DSIA 57
Query: 83 KAIKYSNVVINLIGREFATK---NFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
I + V+NL+ K + + ++E L R ++ GV++F+ +SAL ADP
Sbjct: 58 DTIVGHDAVVNLVSLSPLYKPPEGTSHEEVHLEGTENLVRAAEAAGVDRFLQLSALGADP 117
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ T YI R K + E V E TI RPS ++G G +F+ + +
Sbjct: 118 DGNTGYI-------RAKGKAEAVVRESALEWTIIRPSVVFGDGGEFVEFTKTLTTPYVTG 170
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
L G +T QP++VGD+ + AA +D G+ Y+ GP+ L+++ + +
Sbjct: 171 L---PGGGKTRFQPIWVGDLVPMLAAALEDDAHVGETYEIGGPQIATLADVTELVYAADG 227
Query: 260 K 260
K
Sbjct: 228 K 228
>gi|254251182|ref|ZP_04944500.1| hypothetical protein BDAG_00358 [Burkholderia dolosa AUO158]
gi|124893791|gb|EAY67671.1| hypothetical protein BDAG_00358 [Burkholderia dolosa AUO158]
Length = 319
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 105/241 (43%), Gaps = 25/241 (10%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G +G++GS L N L G + I R + R L + + V + R +
Sbjct: 7 ALLGGTGFIGSRLVNALVDAGKHVRIGTRRRDH-ARHLSML-PVEIVELDAFDTR---AL 61
Query: 82 RKAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ + ++ +NL+G + A+V +P LA E+GV + +H+SAL A
Sbjct: 62 ARFVAGAHAAVNLVGVLHGGRGTPYGPGFERAHVALPGALAAACVEVGVRRVLHMSALGA 121
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA----TIFRPSDMYGSGDKFLRYYGHMW 193
D N P+ Y R+K GE + TIFRPS ++G GD FL + +
Sbjct: 122 DSNGPSMY-------QRSKGDGEAALHAVAASGSLALTIFRPSVVFGPGDAFLNTFATLQ 174
Query: 194 RHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
R L V + QPV+VGDV A V + GK Y+ GP Y L L+
Sbjct: 175 ----RTLPVLPLAMPDARFQPVFVGDVVQAFVNTLDLAASHGKTYELGGPTVYTLEALVR 230
Query: 253 W 253
+
Sbjct: 231 Y 231
>gi|49474860|ref|YP_032901.1| NADH-ubiquinone oxidoreductase [Bartonella henselae str. Houston-1]
gi|49237665|emb|CAF26848.1| NADH-ubiquinone oxidoreductase [Bartonella henselae str. Houston-1]
Length = 334
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 117/269 (43%), Gaps = 24/269 (8%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G ++ L K+G ++ I R L++ G++GQ + +
Sbjct: 17 TVFGGSGFVGRHVVEALTKRGYRVRIAVRSPQKAYYMLQI-GEVGQTQMLRTDIKCRASV 75
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ S+ + L G +E ++ L+ E G+ I++SAL A+ N
Sbjct: 76 ARALLGSDGAVFLPGSLAQANQPNFQKTQIEGAQNVSELTAEAGI-PLIYMSALVANKNA 134
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
Y R K E+ + E P+A I RPS ++G D F ++ F +
Sbjct: 135 SFLY-------ARVKSMSEEIIHNEHPQAIIMRPSIIFGPEDCFFNNLANL--SCFLPII 185
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
G ++ QPVYVGDVA IV A + +GK Y GP+ +L++ ++ +
Sbjct: 186 PLFGGGQSKLQPVYVGDVAEFIVRALEGQVISGKSYDLGGPQIITFQNVLEYILKIIHRK 245
Query: 262 EPDYGYYRYDLRYDPVMPLK--LFINGLF 288
+ MPL LFI GL
Sbjct: 246 KTILS-----------MPLSAGLFIGGLL 263
>gi|399055497|ref|ZP_10743241.1| nucleoside-diphosphate-sugar epimerase [Brevibacillus sp. CF112]
gi|433542729|ref|ZP_20499153.1| hypothetical protein D478_03327 [Brevibacillus agri BAB-2500]
gi|398046973|gb|EJL39553.1| nucleoside-diphosphate-sugar epimerase [Brevibacillus sp. CF112]
gi|432186046|gb|ELK43523.1| hypothetical protein D478_03327 [Brevibacillus agri BAB-2500]
Length = 301
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 13/232 (5%)
Query: 25 GASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA 84
GA+G++G + +L +G + R D G G V + + ++ A
Sbjct: 7 GATGFVGKGVLERLIAEGHDAVCLTRPGSKDKLHHGQAGP-GSVSLAAGDILDVESLKSA 65
Query: 85 IKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+ VI+L+G RE K T +VE + +K+ GV++F+H+SAL + N
Sbjct: 66 MAGCEAVIHLVGIIREQPGKGITFPKIHVEGTKNVVEAAKQAGVKRFVHMSALGSRANAT 125
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
+ Y +RTKY+ E+ V+ IF+PS ++G GD+F+ + R V
Sbjct: 126 SAY-------HRTKYEAEQLVIASGIPYVIFQPSVIFGPGDEFVNMLADLVR--MPVTPV 176
Query: 203 YKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
G + QPV VA V A P A +IY+ GP E+LD
Sbjct: 177 IGDGSYPL-QPVARKTVADVFVQALSLPAATNQIYETGGPDPISYGEILDAI 227
>gi|76809840|ref|YP_331869.1| nucleoside-diphosphate-sugar epimerase [Burkholderia pseudomallei
1710b]
gi|254261421|ref|ZP_04952475.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1710a]
gi|76579293|gb|ABA48768.1| predicted nucleoside-diphosphate-sugar epimerases [Burkholderia
pseudomallei 1710b]
gi|254220110|gb|EET09494.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1710a]
Length = 319
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 115/246 (46%), Gaps = 23/246 (9%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
G + G +G++GS L N L G+ + I R + L D+ V +
Sbjct: 1 MQGQTIAMLGGTGFIGSRLVNVLVGAGAHVRIGARRREHARHLATLPVDI--VELSAFDV 58
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFT--IADANVEIPARLARLSKEMGVEKFIH 131
R E+ + + + +NL+G R K + +V +PA LA E V + +H
Sbjct: 59 R---ELARFVAGAQAAVNLVGVLRGGHGKPYGEGFERLHVALPAALAAACIEARVPRMLH 115
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGE----KEVLREFPEATIFRPSDMYGSGDKFLR 187
+SAL ADP+ P+ Y+ R+K GE + + TIFRPS ++G GD F+
Sbjct: 116 VSALGADPHAPSMYL-------RSKGDGEIALRAQAAAGALDVTIFRPSIVFGPGDAFVN 168
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + R +F L + + + QPV+VGDVA AI AC G Y+ GP+ Y L
Sbjct: 169 TFARLQR-IFPVLPLAMP--DALMQPVHVGDVAQAIANACVRDATRGWTYELGGPRTYRL 225
Query: 248 SELLDW 253
E++ +
Sbjct: 226 EEIVRY 231
>gi|365881477|ref|ZP_09420784.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365290318|emb|CCD93315.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 322
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 106/235 (45%), Gaps = 17/235 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G + L K+ +I + R L+ G +GQ+ + R D
Sbjct: 8 LVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPEL-AGHLQPLGRVGQIHTVQANLRYPD 66
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A++ S+V INL+G E + F DA A + + +H+SA+ A
Sbjct: 67 SVAAALRDSHVAINLVGILTESGAQTF---DAVQAEGAATVAKAAAAAGARLVHVSAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV- 196
D S + R K GE L PEA I RPS ++G D+F + + R
Sbjct: 124 DAE-------SASSYARAKAAGEAASLAAVPEAVIMRPSVVFGPEDQFTNRFAALARVAP 176
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
F L G ET QPVYVGDVA AI A AG Y+ GP+ E+L
Sbjct: 177 FLPLV---GGGETKMQPVYVGDVATAIADAVDGKAQAGATYELGGPEVLSFREIL 228
>gi|76801846|ref|YP_326854.1| NADH dehydrogenase 32K chain-like protein [Natronomonas pharaonis
DSM 2160]
gi|76557711|emb|CAI49294.1| arNOG06768 family NADH-binding domain protein [Natronomonas
pharaonis DSM 2160]
Length = 305
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND---- 78
V G +G++G++LC +L +G ++ R D G V D
Sbjct: 5 VVGGTGFIGTHLCAELHDRGHEVTAMSR-----------SPDDGGVPEGVEATAGDVTTY 53
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLAR--------LSKEMGVEKFI 130
D I A + + V+NL+ A E+ R+ R +++ GV++ +
Sbjct: 54 DSIEPAFEGVDAVVNLV----ALSPLFRPSGGDEMHYRIHRDGTENVVAAAEKHGVDRLV 109
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
+SAL ADP+ T YI R K QGE V E I RPS ++G G +F+ Y
Sbjct: 110 QLSALGADPDGETAYI-------RAKGQGEDIVRSSSLEWVILRPSVVFGDGGEFIPYTK 162
Query: 191 HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
+ L G +T QP+++GD+A I A + + AG+IY+ GP+ L+ +
Sbjct: 163 QLAPAYLTPL---PGGGKTRFQPIWIGDLAPMIADAATEDEHAGEIYELGGPEALTLASI 219
Query: 251 LDWFH 255
H
Sbjct: 220 AKLAH 224
>gi|456351717|dbj|BAM86162.1| conserved hypothetical protein [Agromonas oligotrophica S58]
Length = 326
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
+ TVFG SG++G + L K+ +I + R L+ G +GQ+ + R
Sbjct: 11 TLVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPEL-AGHLQPLGRVGQIHTVQANLRYP 69
Query: 79 DEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
D + A++ S+V INL+G E + F A A + + +H+SA+
Sbjct: 70 DSVASALRDSHVAINLVGILTEGGAQTFNAVQAE---GAATVAKAAAAADARLVHVSAIG 126
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD S + R K GE VL PEA I RPS ++G D+F + + R
Sbjct: 127 ADAE-------SASSYARAKAAGEAAVLAAVPEAVIMRPSVVFGPEDQFTNRFAGLAR-- 177
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
G ET QPVYVGDVA+A+ A AG Y+ GP+ E+L
Sbjct: 178 MSPFLPLIGGGETKMQPVYVGDVASAVADAVDGKAQAGATYELGGPEVLSFREIL 232
>gi|257387465|ref|YP_003177238.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM
12286]
gi|257169772|gb|ACV47531.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM
12286]
Length = 306
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 127/288 (44%), Gaps = 45/288 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-----RLCGDLGQVLFQPYHPRN 77
+ G SG++G+ LC L +G + + R D DL + GD+ +
Sbjct: 5 LVGGSGFIGTNLCTALVDRGHDVTVLARSP--DAADLPTQATTVAGDV----------TD 52
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARL--------ARLSKEMGVEKF 129
D I A + + INL+ + F + N E+ R+ R ++E GVE+F
Sbjct: 53 YDSIEGAFEGQDAAINLVA---LSPLFKPSGGN-EMHDRVHRGGTEHCVRAAEEHGVERF 108
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
+ +SAL AD + T+YI R+K + E+ V + I RPS ++G G +F+++
Sbjct: 109 VQMSALGADADGATHYI-------RSKGRAEEIVRDSSLDWVIVRPSVVFGDGGEFVQFT 161
Query: 190 GHMWRHVFRKLAVY---KKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
+ + +Y G++T QP++VGD+ + A + + G++Y+ GP+
Sbjct: 162 KRLKGMFAPGVPIYPLPGGGKQTRFQPIWVGDLVPMLADALTEAEYVGEVYELGGPEVLT 221
Query: 247 LSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMG 294
L E+ + + G + + L G PG+PMG
Sbjct: 222 LREVTEQVYEAADGSVTIVGLPM------ALAGIGLKTLGFVPGFPMG 263
>gi|390604598|gb|EIN13989.1| NAD(P)-binding protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 311
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 24/186 (12%)
Query: 79 DEIRKAIKYSNVVINLIGREFATKN--FTIADANVEIPARLARLSKEMGVEKFIHISALN 136
D + A+K ++VV++L+G T+ I E +A+ ++++G K IHISA+
Sbjct: 65 DTLVSAMKDASVVVSLVGIMHGTEQDYERIQWRGAE---NVAKATRQVGA-KLIHISAIG 120
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
ADP Y RTK GE+ VL P+ATI RPS ++G GD F + + +
Sbjct: 121 ADPESNIPY-------ARTKALGEQAVLEACPDATIIRPSLVFGPGDSFYQRFARL-SAF 172
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAI-VAACKDP----DAAGKIYQAVGPKRY----LL 247
L V+ G QPVY GD+A A+ + A K+P AGKI +A GP+ + ++
Sbjct: 173 LPFLPVFGGGTSRF-QPVYSGDIARAVEIIARKNPATESKVAGKIIEAGGPEVFTYKEIM 231
Query: 248 SELLDW 253
++LD+
Sbjct: 232 QQVLDY 237
>gi|409729979|ref|ZP_11271590.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|448722284|ref|ZP_21704822.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|445789995|gb|EMA40668.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
Length = 294
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 20/231 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G G++G YLC++L ++G ++ R + D + +G V D I
Sbjct: 5 VTGGGGFIGRYLCDELVERGHEVTALSRDPDPSIFDEDVGTAVGDVTAY-------DSIE 57
Query: 83 KAIKYSNVVINLIGREFATK---NFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
A + + V+NL+ + + + ++ R ++ V +F+ SAL ADP
Sbjct: 58 GAFEGRDCVVNLVALSPLFQPPGDKSHEGVHLRGTENAIRATEAHDVPRFVQQSALGADP 117
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N PT YI R K + E V + TIFRPS ++G G +F+ + +
Sbjct: 118 NGPTAYI-------RAKGRAESVVRDSDLDWTIFRPSVVFGDGGEFVSFTKKVTPPY--- 167
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
LA +G T QP++VGD+ + A +D G+ Y+ GP L+++
Sbjct: 168 LAPLPRGGRTRFQPIWVGDLVPMLADAVEDDSHVGETYEIGGPAALTLADV 218
>gi|349609594|ref|ZP_08888980.1| hypothetical protein HMPREF1028_00955 [Neisseria sp. GT4A_CT1]
gi|348611451|gb|EGY61100.1| hypothetical protein HMPREF1028_00955 [Neisseria sp. GT4A_CT1]
Length = 279
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 115/269 (42%), Gaps = 34/269 (12%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG SG++GS L +QG Q+ P R +F D HP ++ R
Sbjct: 5 IFGGSGFIGSRTVQILKEQGHQVCTPDRRSF----DF-------------LHP-DETAAR 46
Query: 83 KAIKYSNVVINLIGREFATKNFTIADA-NVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+ ++ +V+IN IG +++ I + + P +LA +K G++ ++ +SAL ADP
Sbjct: 47 RLLEGQDVLINCIG--IMSRHAEILETVHHRTPKQLATWAKAAGIKHWVQLSALGADP-- 102
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
S F +K +G+ V + I RPS +YG G + + R L
Sbjct: 103 -----SQSINFVGSKGRGDDAVAQSGIPIAIARPSVVYGRGGTSCELFIKLAR---LPLL 154
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
+G QPV++ DVA + DA I G + L+E L +
Sbjct: 155 PLPEGGRFYLQPVHLADVAEGLAKLAVQTDAGHSIINMTGNQTLTLAEYLTTLRQTLHHK 214
Query: 262 EPDYGYYRYDLRY-DPVMPL-KLFINGLF 288
P + LR DPV+PL L NG+
Sbjct: 215 PPQH-ILPVPLRLIDPVLPLANLLSNGII 242
>gi|167822304|ref|ZP_02453775.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 9]
gi|226199789|ref|ZP_03795340.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei Pakistan 9]
gi|225928140|gb|EEH24176.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei Pakistan 9]
Length = 319
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 23/246 (9%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
G + G +G++GS L N L G+ + I R + L D+ V +
Sbjct: 1 MQGQTIAMLGGTGFIGSRLVNVLVGAGAHVRIGARRREHARHLATLPVDI--VELSAFDV 58
Query: 76 RNDDEIRKAIKYSNVVINLIG--REFATKNFT--IADANVEIPARLARLSKEMGVEKFIH 131
R E+ + + + +NL+G R K + +V +PA LA E V + ++
Sbjct: 59 R---ELARFVAGAQAAVNLVGVLRGGHGKPYGEGFERLHVALPAALAAACIEARVPRMLY 115
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGE----KEVLREFPEATIFRPSDMYGSGDKFLR 187
+SAL ADP+ P+ Y+ R+K GE + + TIFRPS ++G GD F+
Sbjct: 116 VSALGADPHAPSMYL-------RSKGDGEIALRAQAAAGALDVTIFRPSIVFGPGDAFVN 168
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + R +F L + + + QPV+VGDVA AI AC G+ Y+ GP+ Y L
Sbjct: 169 TFARLQR-IFPVLPLAMP--DALMQPVHVGDVAQAIANACVRDATRGRTYELGGPRTYRL 225
Query: 248 SELLDW 253
E++ +
Sbjct: 226 EEIVRY 231
>gi|383768397|ref|YP_005447460.1| oxidoreductase [Bradyrhizobium sp. S23321]
gi|381356518|dbj|BAL73348.1| oxidoreductase [Bradyrhizobium sp. S23321]
Length = 244
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 64/125 (51%), Gaps = 10/125 (8%)
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+ +H+SA+ AD P+ Y R K GE+ V+ P ATIFRPS ++G D+F
Sbjct: 37 RMVHVSAIGADAESPSAY-------ARAKAAGEQAVIAAVPSATIFRPSVVFGPEDQFTN 89
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + R + G ET QPVYVGDVA AI A AG Y+ GP+ +
Sbjct: 90 RFAALARM---SPVMPLIGGETKMQPVYVGDVATAIADAVDGKAKAGATYELGGPEVLTM 146
Query: 248 SELLD 252
E+++
Sbjct: 147 REIIE 151
>gi|34497488|ref|NP_901703.1| NADH-ubiquinone oxidoreductase [Chromobacterium violaceum ATCC
12472]
gi|34103343|gb|AAQ59705.1| probable NADH-ubiquinone oxidoreductase [Chromobacterium violaceum
ATCC 12472]
Length = 313
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G SG++G +L +L +G +I I R + D R+ V + P ++
Sbjct: 8 LIGGSGFIGRHLAAQLASRGHRITIASRRT--GLPDFRVLPSAELVSADIHDP---GQLA 62
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
I + V++++G ++ A+ ++P ++ + GV + +H+SAL A + P
Sbjct: 63 GLIAGHDAVVSMVGILHGSRA-QFEKAHAQLPEKIVDACRRQGVRRLVHVSALGAAQDAP 121
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
S + +TK GE V + TI RPS ++G GD FL +M+ + ++L V
Sbjct: 122 -------SDYQQTKALGELAVESSGLDWTILRPSVVFGHGDAFL----NMFAGLQKRLPV 170
Query: 203 YK-KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
G PV+V DVA A+ + G+ GP+ Y L++L
Sbjct: 171 LPLAGAGCKMAPVWVEDVARAVCECLARKETEGRKLDLAGPETYTLAQL 219
>gi|114776895|ref|ZP_01451938.1| NAD-dependent epimerase/dehydratase [Mariprofundus ferrooxydans
PV-1]
gi|114552981|gb|EAU55412.1| NAD-dependent epimerase/dehydratase [Mariprofundus ferrooxydans
PV-1]
Length = 317
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 25/235 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G SG++G + + G + + P R V +RL + +
Sbjct: 7 VIGGSGFVGRAIAKQAVTAGHTVTVGCRHPERARAMLVDGVRL---------KRVDVVDG 57
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
I +AIK + VI L+G F + A+V+ + + GV +++H+SAL A
Sbjct: 58 RGIDEAIKGCDTVIYLVGLLFERGRYNFQAAHVDGVEHVLAACQRAGVGQYLHMSALGAG 117
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P GS + +K + EK V TIFRPS +YG+GD F + + +
Sbjct: 118 AVP-------GSSYATSKGEAEKHVRASGLNWTIFRPSIIYGAGDSFFSKF----KTISS 166
Query: 199 KLAVYKK-GEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
L V ET QPV+V DVA A V + A + Y+ GP Y +LL+
Sbjct: 167 ALPVMPVICGETRFQPVWVEDVARAFVGTIGNRHTANQCYELGGPATYSFKQLLE 221
>gi|448728770|ref|ZP_21711091.1| NAD-dependent epimerase/dehydratase [Halococcus saccharolyticus DSM
5350]
gi|445796145|gb|EMA46656.1| NAD-dependent epimerase/dehydratase [Halococcus saccharolyticus DSM
5350]
Length = 295
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G G++G +LC++L +G + R V + + +G V D +
Sbjct: 5 VTGGDGFVGRHLCDELADRGHDVTALSRDPDPSVFEADVETAIGDVTAY-------DSME 57
Query: 83 KAIKYSNVVINLI----------GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
A + V+NL+ G E ++F I E R ++E GVE+ + +
Sbjct: 58 GAFADQDAVVNLVALSPLFQPSGGDE---QHFEIHLGGTE---NAVRAAEEHGVERLVQM 111
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
SAL ADP T YI R+K + E+ V + TIFRPS ++G G +F+ + +
Sbjct: 112 SALGADPQGSTAYI-------RSKGEAEQVVRDSALDWTIFRPSVVFGDGGEFVSFTKKL 164
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
LA +G T QP+++GD+ + A + G+ Y+ GP L+++
Sbjct: 165 TPPY---LAPLPRGGRTRFQPIWIGDLVPMLADAVTEDGHTGETYEIGGPATLTLADV 219
>gi|163782851|ref|ZP_02177847.1| NADH dehydrogenase (ubiquinone) [Hydrogenivirga sp. 128-5-R1-1]
gi|159881972|gb|EDP75480.1| NADH dehydrogenase (ubiquinone) [Hydrogenivirga sp. 128-5-R1-1]
Length = 313
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 22/235 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL--GQVLFQPYHPRNDDE 80
V G +G++G Y+ +L K+G I+ VRDL+ L V R+ D
Sbjct: 5 VTGGTGFVGRYVVRELLKEGHTPIL-------GVRDLKKAERLFGKDVSAVEVDFRDKDS 57
Query: 81 IRKAIKYS--NVVINLIGREFATKN--FTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+++A+K S V++LIG F + T + + L + E+G+ + +H+SAL
Sbjct: 58 VKEALKTSKPEAVLHLIGILFEDRRRGLTFEEVHYLYSKNLYESASELGISRAVHMSALG 117
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
+ P S++++TK EKE+L TI RPS + G K + R +
Sbjct: 118 THDDAP-------SRYHQTKRWAEKELLGSGLNYTIMRPSLILGPEQKLFADMDSITR-I 169
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+A+ G QPV V DVA V A +P+ G+IY+ G K+ +LL
Sbjct: 170 LPVVALPGGGNYKF-QPVDVRDVAGCFVKALSEPETEGRIYELCGTKQVSFKDLL 223
>gi|395782193|ref|ZP_10462597.1| hypothetical protein MCY_00994 [Bartonella rattimassiliensis 15908]
gi|395419132|gb|EJF85433.1| hypothetical protein MCY_00994 [Bartonella rattimassiliensis 15908]
Length = 332
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 11/222 (4%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG +G++G Y+ L K+G ++ + R L++ GD+GQ ++ +
Sbjct: 15 TVFGGTGFVGRYVVETLTKRGYRVRVAVRCPQKAYYMLQI-GDVGQTQMLKTDIKHRASV 73
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ ++ + L G + ++ +A L+ E G+ I++S L A+ N
Sbjct: 74 ARALLGADAAVFLPGSLKQANQSNFKNTQIDGAYNVAELTAEAGL-PLIYMSTLVANENA 132
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
Y R K+ GE+ + + P+A I RPS ++G D F + R + +
Sbjct: 133 SCLY-------ARVKFMGEQIIHNKHPQALIIRPSVIFGPEDCFFNTLADLSRFL-PIMP 184
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
++ G+ + QPVYVGDVA I A A GK Y GP+
Sbjct: 185 LFGSGKSRL-QPVYVGDVAEFITRALDGQIAWGKNYDLGGPQ 225
>gi|448384689|ref|ZP_21563424.1| NAD-dependent epimerase/dehydratase [Haloterrigena thermotolerans
DSM 11522]
gi|445657693|gb|ELZ10517.1| NAD-dependent epimerase/dehydratase [Haloterrigena thermotolerans
DSM 11522]
Length = 306
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 34/248 (13%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G+ LC +L ++G ++ P G D ++ + GD+
Sbjct: 5 VAGGTGFIGTNLCAELAERGHEVTALSRSPDGGGLPDGVEVAI-GDVSAY---------- 53
Query: 79 DEIRKAIKYSNVVINLIGRE------FATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
D I + + V+NL+ + T+ E L R ++ +++F+ +
Sbjct: 54 DSIVDTVAGHDAVVNLVALSPLFKPRGGKSHETVHLGGTE---NLVRAAEAGDIDRFLQL 110
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
SAL ADP+ T YI RTK + E V E+TI RPS ++G G +F+ + +
Sbjct: 111 SALGADPDGATAYI-------RTKGKAEAVVRSSALESTIVRPSVVFGDGGEFVDFTKAL 163
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
L G +T QP++VGD+ + A +D AG+ Y GP+ L+++ +
Sbjct: 164 TTPYVTGL---PGGGKTRFQPIWVGDLVPMLADALEDEAHAGETYDLAGPEVLTLADVTE 220
Query: 253 WFHVVMKK 260
+ K
Sbjct: 221 LAYAAEGK 228
>gi|430006196|emb|CCF21999.1| putative NADH dehydrogenase/NADH dehydrogenase (Ubiquinone) protein
[Rhizobium sp.]
Length = 326
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 13/234 (5%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRND 78
+ TVFG SG++G ++ L K+G +I + R D+ L G +GQ+ + R
Sbjct: 9 LVTVFGGSGFVGRHVVRSLVKRGYRIRVAVRRP--DLAGFLLPYGYVGQIALVQANLRYR 66
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ +A++ ++ V+N +G F + + +A + R + K +H+SA+ AD
Sbjct: 67 YSVDRAVEGASFVVNCVGILFESGRNSF-NAVQDFGGRAVAEAARAAGAKLVHVSAIGAD 125
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
+ S + ++K + E +L P+A I RPS ++G D F + M + +F
Sbjct: 126 RD-------SDSSYAQSKGRAEAAILDTVPDAVILRPSIVFGPEDSFFNKFAGMAK-MFP 177
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
L + G+ T QPVYV DVA A+ G+IY+ GP+ E ++
Sbjct: 178 ALPLIGGGK-TKFQPVYVEDVAKAVALGVDGVIPGGRIYELGGPEVLTFRECME 230
>gi|39995493|ref|NP_951444.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter sulfurreducens PCA]
gi|409910935|ref|YP_006889400.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter sulfurreducens KN400]
gi|39982256|gb|AAR33717.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter sulfurreducens PCA]
gi|298504493|gb|ADI83216.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter sulfurreducens KN400]
Length = 294
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 13/186 (6%)
Query: 79 DEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
D A+ + +NL+G REF + T +VE + ++ G+ + + +SAL
Sbjct: 53 DTFAGAVAGCDATVNLVGIIREFPGRGITFEKLHVEATRNVVEAARAAGIRRHLQMSALA 112
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
P+ Y +RTK++ E+ V + + TIFRPS ++G F+ R
Sbjct: 113 TRPDATAAY-------HRTKWRAEEVVRQSELDWTIFRPSLIFGPKGAFVDMLAGFVR-- 163
Query: 197 FRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
R AV G+ T + QPV V DVA A P+ G+ Y+ GP R +E+LD
Sbjct: 164 -RFPAVPVVGDGTYRLQPVSVDDVARCFALALDMPETFGQTYELCGPDRLTYNEVLDIIG 222
Query: 256 VVMKKG 261
V+ KG
Sbjct: 223 RVLGKG 228
>gi|395788163|ref|ZP_10467739.1| hypothetical protein ME7_01074 [Bartonella birtlesii LL-WM9]
gi|395409945|gb|EJF76530.1| hypothetical protein ME7_01074 [Bartonella birtlesii LL-WM9]
Length = 332
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 15/238 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G ++ L K+G ++ I R L++ G++GQ ++ +
Sbjct: 15 TVFGGSGFVGRHVVETLTKRGYRVRIAVRCPHKAYYMLQI-GEVGQTQMLKTDIKHRASV 73
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ ++ + L G + ++ L++E G+ I++S L A+ +
Sbjct: 74 ARALLGADGAVFLPGSLAQANQSNFQKTQINGTQNVSELAEEAGIP-LIYMSTLVANQHA 132
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
Y R K+ GE+ V + P+ I RPS ++G+ D F + R F +
Sbjct: 133 SCLY-------ARVKFAGEQIVQNKHPQTIIMRPSVIFGAEDCFFNTLADLSR--FLPIM 183
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDWFH 255
G ++ QPVYV DVA +V A + AAGK Y GP+ + +L +L H
Sbjct: 184 PLFGGGQSKLQPVYVNDVAEFVVRALEGKVAAGKSYDLGGPQIITFQNILKNILKIIH 241
>gi|398818511|ref|ZP_10577098.1| nucleoside-diphosphate-sugar epimerase [Brevibacillus sp. BC25]
gi|398027653|gb|EJL21198.1| nucleoside-diphosphate-sugar epimerase [Brevibacillus sp. BC25]
Length = 303
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 22/273 (8%)
Query: 25 GASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA 84
GA+G++G + +L +G + + R + + + Q+ + + + +A
Sbjct: 7 GATGFVGRGILERLQAEGYETVCLTRASSTGKLPNKESAN-AQITEATGDLFDKESLMRA 65
Query: 85 IKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
++ + VI+L+G RE K + +VE + +K+ G+++F+H+SAL A N
Sbjct: 66 MQGCDSVIHLVGIIREQPGKGIHFSRIHVEGTKNVLDAAKQAGIKRFVHMSALGAREN-- 123
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
S ++RTKY+ E+ V IFRPS ++G GD+F+ + R V
Sbjct: 124 -----ATSAYHRTKYEAEQLVQESGIPYVIFRPSVIFGPGDEFVNMLADLVR--LPITPV 176
Query: 203 YKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGE 262
G + QPV VA + A P+A +IY+ GP+ ++LD GE
Sbjct: 177 IGDGSYPL-QPVARKTVADVFIQALSRPEATNQIYETGGPEPLSYGQILDTI------GE 229
Query: 263 PDYGYYRYDLRYDPVMPLKLFINGL--FPGYPM 293
G + + + P+ +K +N + FP +P+
Sbjct: 230 A-IGKRKVNKIHIPLALMKPVVNMMERFPFFPI 261
>gi|345005169|ref|YP_004808022.1| NAD-dependent epimerase/dehydratase [halophilic archaeon DL31]
gi|344320795|gb|AEN05649.1| NAD-dependent epimerase/dehydratase [halophilic archaeon DL31]
Length = 295
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 120/284 (42%), Gaps = 43/284 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G G++GS LC L +G + R D + G V D I
Sbjct: 5 VAGGDGFIGSRLCAALADRGHDVTAMSRSPPEDSLPDGVEHATGDVTAY-------DSIA 57
Query: 83 KAIKYSNVVINLIG-------REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
I+ + V+NL+ + K+F I ++E L ++E GV++F+ SAL
Sbjct: 58 PVIEGHDAVVNLVALSPLFRPKGGEEKHFEI---HLEGTRNLVNAAEEAGVDRFLQQSAL 114
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADP PT+YI R K Q E+ V + TI RPS ++G +F+++ +
Sbjct: 115 GADPKGPTHYI-------RAKGQAEELVRNSSLDWTITRPSVVFGEDGEFVKFTKLLAPP 167
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
L G +T QP++VGD+ + A + + G+ Y GP++ ++E+ H
Sbjct: 168 YVTPL---PGGGKTRFQPIFVGDLVPMLADAVEAAEHIGESYDIGGPEKLTMAEVAKLGH 224
Query: 256 VVMKKGEPDYGYYRYDLRYDPVMPLKLFINGL-----FPGYPMG 294
G + PV P+ L GL PG+P G
Sbjct: 225 ----------GADGRSVNVLPV-PMSLSKIGLSALDYLPGFPFG 257
>gi|448731962|ref|ZP_21714245.1| NAD-dependent epimerase/dehydratase [Halococcus salifodinae DSM
8989]
gi|445805240|gb|EMA55463.1| NAD-dependent epimerase/dehydratase [Halococcus salifodinae DSM
8989]
Length = 295
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 33/238 (13%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G G++G LC++L ++G + R V + + +G V D +
Sbjct: 5 VTGGDGFVGRNLCDELAERGHDVTALSRDPDPSVFEADVDTAIGDVTAY-------DSME 57
Query: 83 KAIKYSNVVINLI----------GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
A + V+NL+ G E ++F I E R ++E GVE+F+ +
Sbjct: 58 GAFAGQDSVVNLVALSPLFQPSGGDE---QHFEIHLGGTE---NAVRAAEEHGVERFVQM 111
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
SAL ADP PT YI R+K + E V + TI RPS ++G G +F+ + +
Sbjct: 112 SALGADPRGPTAYI-------RSKGEAEGVVRDSALDWTIVRPSVVFGDGGEFVPFTKKL 164
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
LA +G T QP+++GD+ + + G+ Y+ GP L+++
Sbjct: 165 ---TTPYLAALPRGGRTRFQPIWIGDLTPMLADTVTEDGHTGETYEIGGPATLTLADV 219
>gi|319407904|emb|CBI81558.1| NADH-ubiquinone oxidoreductase [Bartonella schoenbuchensis R1]
Length = 333
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 119/279 (42%), Gaps = 32/279 (11%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPYHPRND 78
TVFG SG++G ++ L KQG ++ I R +Y ++ G++GQ +N
Sbjct: 15 TVFGGSGFVGRHIVETLTKQGYRVRIAVRHPQKAYYMLQ----VGEVGQTQMLATDVKNR 70
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA- 137
+ +A+ ++ I L G +A + +A LS + + IH+S L A
Sbjct: 71 ACVARALLGADGAIFLPGSLTQASQSNFQNAQTDGAKNVAELSAQANIP-LIHMSTLIAN 129
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D N Y K+ E+ V P+A I RPS ++G D F ++ R F
Sbjct: 130 DENTSCSY-------AHVKFTSEQIVRHSHPQAIIMRPSVIFGPEDCFFNTLANLSR--F 180
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
+ G ++ QPVYVGD+A + A + A+GK Y GP VV
Sbjct: 181 SPIIPLFGGGQSKLQPVYVGDIAEFVARALEGKVASGKSYDLGGP-------------VV 227
Query: 258 MKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHL 296
M + R V+ + L I GLF G +G++
Sbjct: 228 MTFQNAIENVLKIIHRKKIVLSMPLSI-GLFMGNILGNI 265
>gi|74318379|ref|YP_316119.1| nucleoside-diphosphate-sugar epimerase [Thiobacillus denitrificans
ATCC 25259]
gi|74057874|gb|AAZ98314.1| nucleoside-diphosphate-sugar epimerases [Thiobacillus denitrificans
ATCC 25259]
Length = 345
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 33/263 (12%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++G++L ++L +G + + R ++L L + +V+ H ++ E+
Sbjct: 8 VLGGSGFVGTHLVSQLAARGLNVRVLSRRR-ETAKELILLPTV-EVVEADVH--DEHELV 63
Query: 83 KAIKYSNVVINLIG--REFATKNFTIADA--------NVEIPARLARLSKEMGVEKFIHI 132
+ + + VINL+G E + A ++E+P ++ E V + +H+
Sbjct: 64 RHFRGMDAVINLVGILHEGKVGRADLPSARRGDFQRVHIELPRKIVHAMGEANVHRLLHM 123
Query: 133 SALNADPNPPTYYI-SGGSQFYRTKYQGEKEVLREF-------------PEATIFRPSDM 178
SAL ADPN + Y S G + G + V E T+FRPS +
Sbjct: 124 SALGADPNSRSAYQRSKGIGEALVREAGRRHVEHENWYLNGPKFIHGYGLNVTVFRPSVI 183
Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIY 237
+G GD FL M+ + ++ V G + PV+V DVA A + + G+ Y
Sbjct: 184 FGRGDSFL----SMFARLLKRFPVLPLGSGDARFAPVHVEDVARAFADSLDNVATFGETY 239
Query: 238 QAVGPKRYLLSELLDWFHVVMKK 260
+ GP+ Y L EL+ + V K
Sbjct: 240 ELCGPRAYTLQELVSYVGEVTGK 262
>gi|393235434|gb|EJD42989.1| NAD(P)-binding protein [Auricularia delicata TFB-10046 SS5]
Length = 311
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 106/225 (47%), Gaps = 30/225 (13%)
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
D + +A + VV++L G A+ + DA A + +H+SA+ AD
Sbjct: 54 DTLARAFTGAQVVVSLAGYLQASDD--AFDAVQRRGAGNVAAAARNAGASLVHVSAIGAD 111
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
Y +RTK GE+EVL E P+ATI RPS ++G GD+F + + + V
Sbjct: 112 AQSKVAY-------WRTKALGEQEVLAELPQATIVRPSLVFGPGDEFFGRFAKLAK-VMP 163
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAI-VAACKDPD----AAGKIYQAVGPKRYLLSELLDW 253
L V+ G+ QPVYVGD+A + + A P+ GKI +A GP+ + EL++
Sbjct: 164 FLPVFDGGKSRF-QPVYVGDIARLVELCARGSPEISTAVTGKIVEAGGPEVFTYRELME- 221
Query: 254 FHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTP 298
+V+K Y R P++ L I G F Y + L P
Sbjct: 222 --LVLK----------YSNRRRPILSLPSSI-GKFQAYFLERLPP 253
>gi|291294773|ref|YP_003506171.1| NAD-dependent epimerase/dehydratase [Meiothermus ruber DSM 1279]
gi|290469732|gb|ADD27151.1| NAD-dependent epimerase/dehydratase [Meiothermus ruber DSM 1279]
Length = 299
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G SGY+G+++ L ++G Q+ + R R G L V + ++ +
Sbjct: 5 IVGGSGYVGTHMAQHLLERGHQVTVASR---------RGEGPLSGVRYVMADAAKNEGLL 55
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
+A + +I L+G + T A+V+ +K G+ +F+H+SAL
Sbjct: 56 EAAQGQEALIYLVGIIRERGDQTFRQAHVDGVRHSLAAAKAAGIARFVHMSALGTARGT- 114
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK--- 199
GS++Y TK +GE+ V + TI RPS ++G GD+F +G + + +
Sbjct: 115 ------GSRYYETKAEGEELVQASRLDWTILRPSLIFGQGDEF---FGGILKGLVTAPIP 165
Query: 200 -LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ + G + P++VGDVAAA A P+ + Y VGPK Y ELL
Sbjct: 166 FIPLIGDGRFVFR-PIWVGDVAAAFEQALGRPNTIHRSYNLVGPKEYTFRELL 217
>gi|398830861|ref|ZP_10589042.1| putative nucleoside-diphosphate sugar epimerase [Phyllobacterium
sp. YR531]
gi|398213441|gb|EJN00035.1| putative nucleoside-diphosphate sugar epimerase [Phyllobacterium
sp. YR531]
Length = 322
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 104/235 (44%), Gaps = 15/235 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ L K+G ++ + R L+ G +GQ+ + R
Sbjct: 8 LVTVFGGSGFVGRHVVRALAKRGYRVKVAVRRPDLAFH-LQPLGGVGQIQAVQANLRYRW 66
Query: 80 EIRKAIKYSNVVINLIGR--EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ +A+ S+ VINL+G E ++ F + AR + H+SAL A
Sbjct: 67 SVDRAVAGSDHVINLVGILYEGGSQRFNTVH---DFGARAVAEAARAAGVPLTHMSALGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DP + S +K + E+ VL+ PEA I RPS ++G D F + M R
Sbjct: 124 DPQSQSLSAS-------SKGRAEEAVLKILPEAYIIRPSVIFGPEDGFFNKFAAMAR--I 174
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
G T QPVYVGDVA AI + G Y+ G + + +D
Sbjct: 175 SPFLPLIGGGHTKFQPVYVGDVAEAIARSVDGALQPGATYELGGGEVLTFHQCMD 229
>gi|448689566|ref|ZP_21695150.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula japonica
DSM 6131]
gi|445777837|gb|EMA28797.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula japonica
DSM 6131]
Length = 299
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 29/241 (12%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G +LC +L +G + R D L D+ V D I
Sbjct: 5 VVGGTGFIGQHLCRELDDRGHTVTALSRSP----EDATLPSDVKTVTGDV---TEYDSIE 57
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARL--------ARLSKEMGVEKFIHISA 134
A + + V L+ A D ++ R+ + ++E VE+F+ +SA
Sbjct: 58 SAFEGQDAVYYLV----ALSPLFKPDGGDKMHERIHLGGTENSVQAAEEHDVERFVQLSA 113
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L ADPN T+YI R+K + E+ V + TIFRPS ++G G +F+ + +
Sbjct: 114 LGADPNGDTHYI-------RSKGEAERVVTESSLDWTIFRPSVVFGEGGEFVSFTKRLKG 166
Query: 195 HVFRKLAVYK---KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ +Y G +T QP++VGD+ +V + + + G+ Y+ GP+ L ++
Sbjct: 167 MFAPGVPLYPLPGGGRQTKFQPIWVGDLVPMLVDSIESEEHVGETYEIGGPEVLTLRDVT 226
Query: 252 D 252
+
Sbjct: 227 N 227
>gi|340382827|ref|XP_003389919.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Amphimedon queenslandica]
Length = 334
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 21/253 (8%)
Query: 5 HLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLC 62
H +KG RSS + G SG++G +L L ++G S+++ R R L +
Sbjct: 7 HYRKGF--RSSMKRKKIAILGGSGFVGRHLVAALAERGIASRVLTRRRNR---TRHLLVV 61
Query: 63 GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSK 122
+ V P ++R + + VINL+G +++ AD + +PA +A +
Sbjct: 62 PNCEVVEANPLRL---ADLRGHLAGCDAVINLVGILNQSRSARFADVHAGLPASIAAACR 118
Query: 123 EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPE--ATIFRPSDMYG 180
GV + +HISAL + P+ Y+ R+K++GE + + T RPS ++G
Sbjct: 119 SAGVGRIVHISALGVAEDAPSEYL-------RSKFKGETAIHAAGGDIAVTSLRPSIIFG 171
Query: 181 SGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAV 240
GD F + + L + PV+V DV AI+ D + Y+
Sbjct: 172 PGDSFFNRFAILLS--LSPLVFPLACADARFAPVWVEDVVKAILRILDDDSTFDRRYELC 229
Query: 241 GPKRYLLSELLDW 253
GP+ L EL+ +
Sbjct: 230 GPQVRSLHELVQF 242
>gi|254468252|ref|ZP_05081658.1| NAD-dependent epimerase/dehydratase [beta proteobacterium KB13]
gi|207087062|gb|EDZ64345.1| NAD-dependent epimerase/dehydratase [beta proteobacterium KB13]
Length = 294
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 18/227 (7%)
Query: 22 TVFGASGYMGSYLCNKLGK-QGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE 80
+FG SG++GS L KL + QI + R N ++ L++ L V F + N
Sbjct: 5 VIFGGSGFIGSELIIKLANYKNFQIDVITR-NKKNIHPLKV---LPNVRFHEINSFNYAA 60
Query: 81 IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
I K I+ S +VINL+G K + P + L + V+KFIH+SAL ++ N
Sbjct: 61 IEKYIRGSEIVINLMGILHEDKKNLFKTIHTIYPKIIQNLCIKNKVKKFIHMSALRSETN 120
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIF--RPSDMYGSGDKFLRYYGHMWRHVFR 198
S + +K+ GEK++L++ + F +PS ++G+ D F+ + + + +
Sbjct: 121 --------ASNYLESKHMGEKQLLQKKHQLKTFILKPSIIFGTDDNFINMFFKVMK-ISP 171
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245
+AV ++ QP+ V D+ I A ++ + ++ GPK Y
Sbjct: 172 IMAVI--SPNSLFQPISVKDLVLIITALIQNNSFKSRTFELGGPKTY 216
>gi|163867338|ref|YP_001608532.1| NADH-ubiquinone oxidoreductase [Bartonella tribocorum CIP 105476]
gi|161016979|emb|CAK00537.1| NADH-ubiquinone oxidoreductase [Bartonella tribocorum CIP 105476]
Length = 332
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPYHPRND 78
TVFG SG++G ++ L K+G ++ I R +Y ++ G++GQ ++
Sbjct: 15 TVFGGSGFVGRHVVENLTKRGYRVRIAVRCPQKAYYMLQ----TGEVGQTQMLKTDIKHR 70
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ +A+ ++ + L G ++ +A L+ E G+ I++S L A+
Sbjct: 71 ASVVRALLGADAAVFLPGSLKQANQSNFKSTQIDGTYNVAELTAEAGI-PLIYMSTLVAN 129
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
N Y R K+ GE+ + + P+A I RPS ++G D F + R F
Sbjct: 130 ENASCLY-------ARVKFMGEQIIYNKHPQAIIMRPSVIFGPEDCFFNTLADLSR--FL 180
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
+ G ++ QPVYVGDVA I A A GK Y GP+
Sbjct: 181 PIMPLFGGGQSKLQPVYVGDVAEFIARALDGQVAWGKNYDLGGPQ 225
>gi|171056801|ref|YP_001789150.1| NADH dehydrogenase [Leptothrix cholodnii SP-6]
gi|170774246|gb|ACB32385.1| NADH dehydrogenase [Leptothrix cholodnii SP-6]
Length = 321
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 110 NVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP- 168
+V +P R+A GV + +H+SAL D S + R+K QGE +VLR P
Sbjct: 92 HVTLPQRIAGACAAAGVTRLVHVSALGVDDA--ADAPPAPSLYLRSKTQGE-QVLRAAPG 148
Query: 169 -EATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA--VYKKGEETIKQPVYVGDVAAAIVA 225
T+ RPS ++G+ D+F+ + + LA + G QPV+V DVA AIVA
Sbjct: 149 LALTLLRPSVIFGAEDRFINLFA-----ALQALAPVMPLAGAAARFQPVWVDDVAHAIVA 203
Query: 226 ACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFIN 285
DP G+ ++ GP+ L EL+ R+ PV+PL +
Sbjct: 204 CLTDPRHIGRTFECAGPQVLTLRELVQL-------------AGRWSGHPRPVLPLPEWAG 250
Query: 286 -------GLFPGYPM 293
GL PG P+
Sbjct: 251 RLQAAALGLLPGEPL 265
>gi|292656333|ref|YP_003536230.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax volcanii
DS2]
gi|291372445|gb|ADE04672.1| nadh dehydrogenase/oxidoreductase-like protein [Haloferax volcanii
DS2]
Length = 301
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 46/288 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRG-NFYDVRD--LRLCGDLGQVLFQPYHPRNDD 79
V G SG++GS+LC +L +G + R N D+ D + GD+ + D
Sbjct: 5 VVGGSGFIGSHLCRELQSRGHSVTAMSRSPNSEDLPDGVEKAMGDV----------TDYD 54
Query: 80 EIRKAIKYSNVVINLIGR----EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
I A + + V+NL+ E + N + + + + ++ V + + +SAL
Sbjct: 55 SIAGAFEGKDAVVNLVALSPLFEPSGGNRMHDIVHWQGTENVVKAAEANDVPRLVQMSAL 114
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD + T YI R+K + E V + IFRPS ++G G +F+ + +
Sbjct: 115 GADSDGDTAYI-------RSKGKAEGAVKSSGLDWVIFRPSVVFGDGGEFVSFTKRLKGM 167
Query: 196 VFRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ +Y ET QP++VGD+ + A + D AG+ Y+ GP++ L E+ +
Sbjct: 168 FAPGVPLYPLPGNGETRFQPIWVGDLVPMLADAVEGDDHAGETYRIGGPEKLTLREITEM 227
Query: 254 FHVVMKKGEPDYGYYRYDLRYDPVMPL-------KLFINGLFPGYPMG 294
Y + + ++PL L + G PG+PMG
Sbjct: 228 V-------------YDAENKSITIVPLPMGLAGVGLTVLGAVPGFPMG 262
>gi|398352332|ref|YP_006397796.1| NAD-dependent epimerase/dehydratase [Sinorhizobium fredii USDA 257]
gi|390127658|gb|AFL51039.1| NAD-dependent epimerase/dehydratase [Sinorhizobium fredii USDA 257]
Length = 316
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 22/245 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD--VRDLRLCGDLGQVLFQPYHPRN 77
+ TV G +G++G + ++L + + R D R + + P
Sbjct: 15 IVTVVGGTGFLGRRIVSRLLDRAVDVRAVSRHPHKDKSASGKRPSQQIEADILDP----- 69
Query: 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
I A+ S V+N + T +VE A LA S+ GVE F+ IS + A
Sbjct: 70 -SSIAAAVAGSRAVVNAVSLYVERGEQTFERVHVEAAADLATASRHAGVEMFVQISGIGA 128
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DP + YI R + +GE+ V FP A I RP+ M G D F+ +
Sbjct: 129 DPKSRSNYI-------RARGRGEEVVKAAFPGAVIVRPAVMAGPDDLFITTIARL----V 177
Query: 198 RKLAVYKKGEE--TIKQPVYVGDVAAAIV-AACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ L +Y E T QPVYV DVA A+ A A I++ GP+ Y EL+
Sbjct: 178 QILPIYPLFGEGGTRLQPVYVEDVAEAVSRLALGQHSTAASIFECAGPRIYSYRELVRQI 237
Query: 255 HVVMK 259
+K
Sbjct: 238 ASQLK 242
>gi|148262267|ref|YP_001228973.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
gi|146395767|gb|ABQ24400.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
Length = 296
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 41/249 (16%)
Query: 25 GASGYMGSYLCNKLGKQGSQI--IIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
G +G++G +L L ++G +I + RG+ ++ + GD+ + D
Sbjct: 7 GGTGFVGGHLRRALLEKGHRIRLLAHKRGDGFEDGIEVVEGDVTR----------PDTFA 56
Query: 83 KAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
+ INL+G REF + T V+ + +K G+++++H+SAL PN
Sbjct: 57 GQLAGCEAAINLVGIIREFPAQGITFEKLLVQATRNMVDAAKGAGIKRYLHMSALGTRPN 116
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
+ Y +R+K+ E+ V + TIFRPS ++G D F+ KL
Sbjct: 117 ATSAY-------HRSKFLAEEYVRASGLDYTIFRPSIIFGPKDDFI-----------NKL 158
Query: 201 AVYKKGEETIK---------QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
A Y KG + QP+ DVA + + P+ GK Y+ G R +E+L
Sbjct: 159 AGYIKGYPAVPVIGDGKYRLQPIAADDVARCFAMSLEMPETVGKTYEICGIDRLTYNEML 218
Query: 252 DWFHVVMKK 260
D V+ K
Sbjct: 219 DTIGRVLGK 227
>gi|240849712|ref|YP_002971100.1| NADH-ubiquinone oxidoreductase [Bartonella grahamii as4aup]
gi|240266835|gb|ACS50423.1| NADH-ubiquinone oxidoreductase [Bartonella grahamii as4aup]
Length = 332
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 17/234 (7%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPYHPRND 78
TVFG SG++G ++ L K+G ++ I R +Y ++ G++GQ ++
Sbjct: 15 TVFGGSGFVGRHVVETLTKRGYRVRIAVRYPQKAYYMLQ----IGEVGQTQMLKTDIKHR 70
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ +A+ ++ + L G + ++ +A L+ + + I++SAL A+
Sbjct: 71 ASVARALLGADAAVFLPGSLKQANQSNFKNTQIDGAYNVAELTAQAAIP-LIYMSALVAN 129
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
N Y R K+ GE+ V + P+A I RPS ++G D F + R F
Sbjct: 130 ENASCLY-------ARVKFMGEQIVHNKHPQAIIIRPSVIFGPEDCFFNTLADLSR--FL 180
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G ++ QPVYVGDVA I A A GK Y GP+ L+
Sbjct: 181 PIMPLFGGGQSKLQPVYVGDVAEFIARALDGQVAWGKNYDLGGPQIITFQNTLE 234
>gi|284163930|ref|YP_003402209.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM
5511]
gi|284013585|gb|ADB59536.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM
5511]
Length = 306
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 40/240 (16%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-----RLCGDLGQVLFQPYHPRN 77
V G +G++G+ LC +L +G ++ R N D DL R GD+
Sbjct: 5 VAGGTGFIGTNLCTELNDRGHEVTALSR-NPSDA-DLPAGVERATGDVSAY--------- 53
Query: 78 DDEIRKAIKYSNVVINLIG--------REFATKNFTIADANVEIPARLARLSKEMGVEKF 129
D I + + + V+NL+ E A + + A L R +++ V++F
Sbjct: 54 -DSIAETVADHDAVVNLVSLSPLYQPPDEDAHERVHLGGT-----ANLVRAAEDGDVDRF 107
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
+ IS L ADP+ T +F RTK + E V TI RPS ++G G +FL +
Sbjct: 108 VQISGLGADPDADT-------EFLRTKGEAEAVVRDSHLAWTIVRPSVVFGDGAEFLEFT 160
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
+ L G +T QP++VGD+ + A D G+ Y+ GP+ L++
Sbjct: 161 KRLTTPYVTGL---PGGGKTRFQPIWVGDLVPMLADALADGTHVGETYEIAGPQIVTLAD 217
>gi|395780466|ref|ZP_10460928.1| hypothetical protein MCW_01015 [Bartonella washoensis 085-0475]
gi|395418812|gb|EJF85129.1| hypothetical protein MCW_01015 [Bartonella washoensis 085-0475]
Length = 332
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 17/239 (7%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPY 73
N + TVFG SG++G ++ L K+G ++ I R +Y ++ G++GQ
Sbjct: 10 NPKLITVFGGSGFVGRHVVEALTKRGYRVRIAVRYPQKAYYMLQ----IGEVGQTQMLKT 65
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
++ I +A+ ++ + L G + ++ L+ E G+ I++S
Sbjct: 66 DIKHRASIARALLGADGAVFLAGSLTQANQSNFQKIQTDGAQNVSELTAEAGIP-LIYMS 124
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
AL A+ N Y R K EK + + P+A I RPS ++G D F ++
Sbjct: 125 ALVANQNASFLY-------ARVKSMSEKIIQDKHPQAIIMRPSVIFGPEDCFFNTLANL- 176
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
F + G ++ QPVYVGD+A +V A + +GKIY GP+ +L+
Sbjct: 177 -SCFLPIIPLFGGGQSKLQPVYVGDIAEFVVRALEGQVISGKIYDLGGPQIITFQNVLE 234
>gi|298290323|ref|YP_003692262.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506]
gi|296926834|gb|ADH87643.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506]
Length = 340
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G ++ L K+G ++ + R L+ G +GQ+ + R
Sbjct: 26 LVTIYGGSGFIGRHVVRALAKRGWRVRVAVRRPDL-AGHLQPLGAVGQINPVQANLRYPA 84
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +A + + VVINL+G + + + ++A ++E+G + IH SA+ A+
Sbjct: 85 SVLRAAEGAEVVINLVGVLHESGRQSFEAVHAFGAKQVALAAREVGA-RLIHGSAIGANA 143
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+Y ++K GE PEA I RPS ++G D F + M R
Sbjct: 144 ESTAFY-------GKSKAAGEAAAFEAVPEAVIMRPSIVFGPEDDFFNRFASMSR--LSP 194
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ G ET QPV+VGDVA A A + G +Y+ GP+ +L++
Sbjct: 195 VLPLIGGGETRFQPVFVGDVAEAYARAVDNLARPGTVYELGGPEILSFKQLMELM 249
>gi|171317273|ref|ZP_02906470.1| NADH dehydrogenase [Burkholderia ambifaria MEX-5]
gi|171097534|gb|EDT42371.1| NADH dehydrogenase [Burkholderia ambifaria MEX-5]
Length = 319
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 25/240 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++GS L N L G Q+ I R + R L++ + + +
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKQVRIGTRRREH-ARHLQML----PIEIVELDALDTRTLA 62
Query: 83 KAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + ++ INL+G ++ A+V +PA LA E+GV + +H+SAL AD
Sbjct: 63 RFVAGAHAAINLVGVLHGGRDTPYGPGFERAHVALPAALAAACVEVGVRRVLHMSALGAD 122
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEV----LREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ G S + R+K GE + + TIFRPS ++G GD FL + ++ R
Sbjct: 123 SH-------GASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDSFLNTFANLQR 175
Query: 195 HVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
L V + QPV+VGDV +A V A GK Y+ GP Y L +L+ +
Sbjct: 176 ----TLPVLPLAMPDARFQPVFVGDVVSAFVNTLDLTAAYGKTYELGGPTVYTLEQLVRY 231
>gi|435845863|ref|YP_007308113.1| putative nucleoside-diphosphate sugar epimerase [Natronococcus
occultus SP4]
gi|433672131|gb|AGB36323.1| putative nucleoside-diphosphate sugar epimerase [Natronococcus
occultus SP4]
Length = 301
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 26/236 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G++LC +L ++G + R D DL DL Y D I
Sbjct: 5 VAGGTGFIGTHLCTELHERGHDVTALSRNP--DDADLPSGIDLAMGDASAY-----DSIV 57
Query: 83 KAIKYSNVVINLIGRE------FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + +VV+NL+ T + + E L R +E GV++F+ +SAL
Sbjct: 58 EDVDGHDVVVNLVSLSPLYEPPEGTSHHEVHLGGTE---NLVRACEERGVDRFVQMSALG 114
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD + T YI R K E V + TI RPS ++G G +F+ + +
Sbjct: 115 ADSDGTTDYI-------RAKGDSETAVRESDLDWTIVRPSVVFGEGGEFVEFTKELTTPY 167
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
L G +T QP++VGD+ + +D G+ Y+ GP+ L+++ +
Sbjct: 168 VTGL---PGGGKTRFQPIWVGDLVPMLADIVEDDAHVGETYEFAGPQVATLADVTE 220
>gi|334132822|ref|ZP_08506578.1| NADH ubiquinone oxidoreductase 1 alpha subunit [Methyloversatilis
universalis FAM5]
gi|333442306|gb|EGK70277.1| NADH ubiquinone oxidoreductase 1 alpha subunit [Methyloversatilis
universalis FAM5]
Length = 318
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 20/234 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++GS + L ++ ++I+P R + L L + V + P +
Sbjct: 8 LIGGAGFVGSQVAGLLAERNVRVIVPTR-RRDRAKHLILLPMVDVVEADVHDPA---VLA 63
Query: 83 KAIKYSNVVINLIG----REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ ++ VIN +G R A+V +P +A +K GV++ +H+SAL A
Sbjct: 64 RLAAGADAVINCVGILHSRSGQPWGRDFERAHVALPKAIAAAAKAAGVQRLVHVSALGAA 123
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P+ Y+ R+K GE + T+FRPS ++G G FL M+ + +
Sbjct: 124 DAAPSEYL-------RSKAAGEIAIRNGGVPWTVFRPSLIFGDGKCFL----SMFAGLLK 172
Query: 199 KLAVYK-KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
V+ G +T QPV V DVA IV A D A G+ + GPK Y + EL+
Sbjct: 173 IAPVFPLAGADTRYQPVSVRDVARCIVRALDDDAAIGQTFALCGPKVYTMRELV 226
>gi|254461807|ref|ZP_05075223.1| NADH-ubiquinone oxidoreductase [Rhodobacterales bacterium HTCC2083]
gi|206678396|gb|EDZ42883.1| NADH-ubiquinone oxidoreductase [Rhodobacteraceae bacterium
HTCC2083]
Length = 326
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ T++G SG++G Y+ ++ K+G ++ + R + ++ G +GQV + R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMFVKPYGTVGQVEPILCNIRDDA 62
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ A++ ++ V+N +G E R+AR++ G+E + ISA+ AD
Sbjct: 63 SVAAALQGADAVVNCVGILTQNGKNKFDAVQAEGAGRVARVAAAAGIETMVQISAIGADA 122
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ S + RTK GE VL P A I RPS M+G+ DKF + M R
Sbjct: 123 D-------ANSDYARTKALGEANVLAHMPNAMILRPSIMFGAEDKFFNRFASMAR 170
>gi|153864212|ref|ZP_01997183.1| NAD-dependent epimerase/dehydratase [Beggiatoa sp. SS]
gi|152146292|gb|EDN72816.1| NAD-dependent epimerase/dehydratase [Beggiatoa sp. SS]
Length = 263
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 18/236 (7%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++G L N+L K G Q+ + R R+ + L + ++
Sbjct: 6 LLGGTGFVGKQLANRLFKMGWQVRVLTRR-----REEHRELLVLPTLELLSTNYDQAQLN 60
Query: 83 KAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
+ + +VVINL+G E A+VE+P ++ +E +++ +HISALNAD
Sbjct: 61 EQTRGCDVVINLVGILNESGHDGKGFQKAHVELPQKVIAACQENKIKRLLHISALNADAT 120
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPE--ATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
S + RTK + E +++ + T FRPS ++G GD FL + M R V
Sbjct: 121 ------QKNSHYLRTKGEAE-DLIHAVSDVHVTSFRPSVIFGEGDSFLNRFVSMLR-VPS 172
Query: 199 KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ + + + PV+V DV A++ ++P G+ Y G Y L EL+ +
Sbjct: 173 PIFMLPSFDAKLA-PVWVNDVVRAMLEVVENPQYDGERYNFCGGSVYTLQELVAYL 227
>gi|222054185|ref|YP_002536547.1| NAD-dependent epimerase/dehydratase [Geobacter daltonii FRC-32]
gi|221563474|gb|ACM19446.1| NAD-dependent epimerase/dehydratase [Geobacter daltonii FRC-32]
Length = 293
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 11/175 (6%)
Query: 88 SNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYY 145
+ VINL+G REF ++ T +VE +K+ G+++++ +SAL
Sbjct: 62 CDAVINLVGIIREFPSRGVTFQRLHVEATRNQVEAAKQAGIKRYLQMSALGTRDG----- 116
Query: 146 ISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKK 205
S+++RTKYQ E+ V + TIFRPS ++G D F+ M R + V
Sbjct: 117 --ATSRYHRTKYQAEQFVRDSQLDYTIFRPSIVFGPKDDFINKLAGMIR-TLPAVPVIGD 173
Query: 206 GEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260
G+ + QP+ DVA A + P+ GK Y G R ++LLD + K
Sbjct: 174 GKYRL-QPIAGDDVARCFAMALEMPETIGKTYDLCGSTRLSYNDLLDCIGRALGK 227
>gi|395783672|ref|ZP_10463521.1| hypothetical protein ME3_00177 [Bartonella melophagi K-2C]
gi|395425794|gb|EJF91954.1| hypothetical protein ME3_00177 [Bartonella melophagi K-2C]
Length = 333
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 32/279 (11%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPYHPRND 78
TVFG SG++G ++ L KQG ++ + R +Y ++ G++GQ +N
Sbjct: 15 TVFGGSGFVGRHIVETLTKQGYRVRVAVRYPQKAYYMLQ----VGEVGQTQMLATDIKNR 70
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA- 137
+ +A+ ++ I L G +A ++ +A LS + + IH+S L A
Sbjct: 71 ACVARALLGADGAIFLPGSLTQASQSNFQNAQIDGAKNVAELSAQANIP-LIHMSTLIAN 129
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D N Y K+ E+ V P+A I RPS ++G D F ++ R F
Sbjct: 130 DENTSCSY-------AHVKFTSEQIVRHSHPQAIIMRPSVIFGPEDCFFNTLANLSR--F 180
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
+ G ++ QPVYVGD+A + A + A GK Y GP VV
Sbjct: 181 SPIIPLFGGGQSKLQPVYVGDIAEFVARALEGKVAFGKSYDLGGP-------------VV 227
Query: 258 MKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHL 296
M + R V+ + L I GLF G +G++
Sbjct: 228 MTFQNTVENVLKIIHRKKIVLSMPLSI-GLFIGNILGNI 265
>gi|448397522|ref|ZP_21569555.1| NAD-dependent epimerase/dehydratase [Haloterrigena limicola JCM
13563]
gi|445672621|gb|ELZ25192.1| NAD-dependent epimerase/dehydratase [Haloterrigena limicola JCM
13563]
Length = 306
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 20/233 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G+ LC +L ++G ++ R D + +G V D I
Sbjct: 5 VAGGTGFIGTNLCAELAERGHEVTALSRSPDRDGLPDGVETAIGDV-------SASDSIA 57
Query: 83 KAIKYSNVVINLIGRE---FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ + V+NL+ + + + ++ L R +++ V++F+ +SAL ADP
Sbjct: 58 TTVADHDAVVNLVSLSPLFEPPRGTSHEEVHLGGTENLVRAAEDGDVDRFLQLSALGADP 117
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N T YI RTK Q E+ V TI RPS ++G G +F+ + +
Sbjct: 118 NGDTAYI-------RTKGQAERVVRDSSLAWTIVRPSVVFGDGGEFVDFTKTLTTPYVTG 170
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
L G +T QP++VGD+ + A +D + Y+ GP+ L+++ +
Sbjct: 171 L---PGGGKTRFQPIWVGDLVPILADALEDDTHVSETYEIGGPQVLTLADVTE 220
>gi|357974554|ref|ZP_09138525.1| NADH dehydrogenase [Sphingomonas sp. KC8]
Length = 310
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 118/238 (49%), Gaps = 25/238 (10%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQPYHPRND 78
T+FG G++G Y+ +L G+++ + R D R ++ G LGQ F
Sbjct: 6 TLFGGGGFIGRYVAQELLSAGARVRLAER----DPRHAWFIKSLGGLGQTQFAAADVTKP 61
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
D + +A+ S+VVINL+G N +V +A +++ GV +H+SA+ AD
Sbjct: 62 DSVARAVAGSDVVINLVG----ILNGDFDAVHVAGARNVAEAARDAGVGALVHVSAIGAD 117
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
+ S + R+K +GE V F +ATI RPS ++G D+F+ + + R
Sbjct: 118 -------AAAESAYGRSKGEGEAAVRAAFADATIIRPSVVFGPEDQFVNRFAALAR---- 166
Query: 199 KLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDA-AGKIYQAVGPKRYLLSELLDWF 254
+ V +++ QPV+V DVA AI AA DP A + ++ GP+ +++L W
Sbjct: 167 -MPVLPVIRGSVRLQPVFVADVARAIAAAALDPARYARRTFELGGPEMLSMADLNAWI 223
>gi|448319161|ref|ZP_21508667.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
gi|445596775|gb|ELY50859.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
Length = 301
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 20/233 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G++LC +L ++G + R D DL DL Y D I
Sbjct: 5 VAGGTGFIGTHLCTELHERGHDVTALSRSP--DDADLPPGIDLAMGDASAY-----DSIV 57
Query: 83 KAIKYSNVVINLIGRE---FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ + + V+NL+ + + ++ L R +E GV++F+ +SAL ADP
Sbjct: 58 EDVDGHDAVVNLVSLSPLYEPPEGTGHREVHLRGTENLVRACEERGVDRFLQMSALGADP 117
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ T YI R K + E V E TI RPS ++G G +F+ + +
Sbjct: 118 DGATAYI-------RAKGEAETVVRESDLEWTIVRPSVVFGEGGEFVDFTKELTTPYVTG 170
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
L G T QP+++GD+ + +D G+ Y+ GP+ L+++ +
Sbjct: 171 L---PGGGRTRFQPIWIGDLVPILADVLEDDARVGETYEFAGPQVATLADVTE 220
>gi|389688632|ref|ZP_10178299.1| NAD dependent epimerase/dehydratase family protein [Microvirga sp.
WSM3557]
gi|389690360|ref|ZP_10179377.1| NAD dependent epimerase/dehydratase family protein [Microvirga sp.
WSM3557]
gi|388589878|gb|EIM30166.1| NAD dependent epimerase/dehydratase family protein [Microvirga sp.
WSM3557]
gi|388590591|gb|EIM30874.1| NAD dependent epimerase/dehydratase family protein [Microvirga sp.
WSM3557]
Length = 259
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G +L L + G+ + I R RL ++ + +D +
Sbjct: 5 TVFGGSGFLGRHLVEHLARTGASVRIAARHPLTTAEPPRL----ARIQYVAADILDDAAV 60
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+ AI+ ++ VINL+G + T E R+A + + V + +H+SAL A
Sbjct: 61 QAAIQEADTVINLVGILSQVRRQTFTALYEEGARRVAATAGRLRVRQLVHVSALGASRTA 120
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P R+K GE V F ATI RPS +YG D F + + L
Sbjct: 121 PALA-------DRSKAAGEAAVRAAFLGATIIRPSLVYGPDDHFFNGFAAL------ALP 167
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP 242
+ G T QPVYV D+ A + + P AA K + P
Sbjct: 168 LIGSG-RTRFQPVYVEDLVAGVGPFWQTPPAAAKPTSSAAP 207
>gi|433592325|ref|YP_007281821.1| putative nucleoside-diphosphate sugar epimerase [Natrinema
pellirubrum DSM 15624]
gi|448333670|ref|ZP_21522860.1| NAD-dependent epimerase/dehydratase [Natrinema pellirubrum DSM
15624]
gi|433307105|gb|AGB32917.1| putative nucleoside-diphosphate sugar epimerase [Natrinema
pellirubrum DSM 15624]
gi|445621832|gb|ELY75300.1| NAD-dependent epimerase/dehydratase [Natrinema pellirubrum DSM
15624]
Length = 306
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 34/238 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G+ LC +L ++G ++ P G D ++ + GD+
Sbjct: 5 VAGGTGFIGTNLCAELAERGHEVTALSRSPDGGGLPDGVEVAI-GDVSAY---------- 53
Query: 79 DEIRKAIKYSNVVINLIGRE------FATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
D I + + V+NL+ + T+ E L R ++ V++F+ +
Sbjct: 54 DSIVDTVAGHDAVVNLVALSPLFKPRGGKSHETVHLGGTE---NLVRAAEAGDVDRFLQL 110
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
SAL ADP+ T YI RTK + E V E TI RPS ++G G +F+ + +
Sbjct: 111 SALGADPDGATAYI-------RTKGKAEGVVRSSALEWTIVRPSVVFGDGGEFVDFTKAL 163
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
L G +T QP++VGD+ + A +D AG+ Y GP+ L+++
Sbjct: 164 TTPYVTGL---PGGGKTRFQPIWVGDLVPMLADALEDEAHAGETYDLAGPEVLTLADV 218
>gi|448610120|ref|ZP_21660970.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax mucosum
ATCC BAA-1512]
gi|445745479|gb|ELZ96946.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax mucosum
ATCC BAA-1512]
Length = 301
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 40/285 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++GS+LC +L QG + R + G V + D +
Sbjct: 5 VVGGSGFVGSHLCRELHSQGHDVTAMSRNPDDATLPDGVETATGDV-------TDYDSMV 57
Query: 83 KAIKYSNVVINLIGREFATK---NFTIAD-ANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + VINL+ K + + D N + + + ++ V +++ +SAL AD
Sbjct: 58 DEFEGKDAVINLVALTPLYKPEGGYRMHDIVNWQGTENVVKAAETHDVPRYVQMSALGAD 117
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR 198
P+ T YI R+K + E V + IFRPS ++G G +FL + + R
Sbjct: 118 PDADTAYI-------RSKGKAENAVKSSSLDWVIFRPSIIFGDGAEFLTFTKRLKRMFAP 170
Query: 199 KLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
L +Y +T QP+++ D+A V A +D G+ Y+ GP+ L E+ +
Sbjct: 171 GLPLYPLPGNGKTRFQPIWIDDLAPMFVNAIEDDAHVGETYEIGGPEVLTLREVTEMV-- 228
Query: 257 VMKKGEPDYGYYRYDLRYDPVMPLKLFIN-------GLFPGYPMG 294
Y + + ++PL + + G PG+PMG
Sbjct: 229 -----------YDSEGKSITIVPLPMALARLGLTTLGFVPGFPMG 262
>gi|448668076|ref|ZP_21686319.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
amylolytica JCM 13557]
gi|445768734|gb|EMA19813.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
amylolytica JCM 13557]
Length = 299
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 43/248 (17%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-------CGDLGQVLFQPYHP 75
V G +G++G +LC +L QG + R D L GD+ +
Sbjct: 5 VVGGTGFIGQHLCRELDDQGHTVTALSRSP----EDATLPSGVETVAGDVTEY------- 53
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARL--------ARLSKEMGVE 127
D I A + + V L+ A D E+ R+ ++E V+
Sbjct: 54 ---DSIESAFEGQDTVYFLV----ALSPLFKPDGGDEMHERIHLGGTENSVEAAEEHDVD 106
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+F+ +SAL ADPN T+YI R+K + E+ V + TIFRPS ++G G +F+
Sbjct: 107 RFVQLSALGADPNGDTHYI-------RSKGRAEQVVTESSLDWTIFRPSVVFGEGGEFVS 159
Query: 188 YYGHMWRHVFRKLAVYK---KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
+ + + +Y G +T QP++VGD+ +V + + + G+ Y+ GP+
Sbjct: 160 FTKRLKGMFAPGVPLYPLPGGGRQTKFQPIWVGDLVPMLVDSIESEEHVGETYEIGGPEV 219
Query: 245 YLLSELLD 252
L ++ +
Sbjct: 220 LTLRDVTN 227
>gi|448654613|ref|ZP_21681539.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
californiae ATCC 33799]
gi|445766461|gb|EMA17588.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
californiae ATCC 33799]
Length = 299
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 37/245 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G +LC L +QG + P D + + GD+ +
Sbjct: 5 VVGGTGFIGQHLCRALDEQGHAVTALSRSPEDATLPDSVE-TVAGDV----------TDY 53
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARL--------ARLSKEMGVEKFI 130
I A + + V L+ A D ++ R+ + ++E GV +F+
Sbjct: 54 GSIESAFEGQDAVYYLV----ALSPLFKPDGGDKMHERIHLGGTENSVQAAEEHGVNRFV 109
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
+SAL ADPN T+YI R+K Q E+ V + TIFRPS ++G G +F+ +
Sbjct: 110 QLSALGADPNGDTHYI-------RSKGQAEQVVTGSSLDWTIFRPSVVFGKGGEFVSFTK 162
Query: 191 HMWRHVFRKLAVYK---KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + +Y G +T QP++VGD+ +V + + + G+ Y+ GP+ L
Sbjct: 163 RLKGMFAPGVPLYPLPGGGSQTKFQPIWVGDLVPMLVDSIESEEHVGEAYEIGGPEVLTL 222
Query: 248 SELLD 252
++ +
Sbjct: 223 RDVTN 227
>gi|115353129|ref|YP_774968.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria AMMD]
gi|115283117|gb|ABI88634.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria AMMD]
Length = 319
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 31/280 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++GS L N L G + I R + R L++ V + +
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKHVRIGTRRRDH-ARHLQML----PVEIVELDALDTRTLA 62
Query: 83 KAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + ++ INL+G + A+V +PA LA E+GV++ +H+SAL AD
Sbjct: 63 RFVAGAHAAINLVGVLHDGRGTPYGPGFERAHVALPAALAAACVEVGVQRVLHMSALGAD 122
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEV----LREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ G S + R+K GE + + TIFRPS ++G GD FL + ++
Sbjct: 123 SH-------GASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDTFLNTFANLQ- 174
Query: 195 HVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
R L V + QPV+VGDV A V A GK Y+ GP Y L +L+ +
Sbjct: 175 ---RTLPVLPLAMPDARFQPVFVGDVVTAFVNTLDLTAAHGKTYELGGPTVYTLEQLVRY 231
Query: 254 FHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPM 293
++ + R D + L+ + PG PM
Sbjct: 232 CGTLVGR------QARIVRLSDALAQLQARVFECLPGEPM 265
>gi|384214410|ref|YP_005605573.1| oxidoreductase [Bradyrhizobium japonicum USDA 6]
gi|354953306|dbj|BAL05985.1| oxidoreductase [Bradyrhizobium japonicum USDA 6]
Length = 304
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 59 LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPAR 116
L+ G +GQV + R + A++ S+VVINL+G E + F DA A
Sbjct: 29 LQPSGRVGQVHIVQANLRYPASVEAAMRDSDVVINLVGILAESGAQTF---DAVQAKGAE 85
Query: 117 LARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPS 176
+ + +H+SA+ AD P++Y K GE VL P ATIFRPS
Sbjct: 86 TVAKAAAAAGARLVHVSAIGADAESPSHYAR-------AKAAGEAAVLAAVPSATIFRPS 138
Query: 177 DMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI 236
++G D+F + + R + GE T QPVYVGDVA AI A AG
Sbjct: 139 VIFGPEDQFTNRFAALARM---SPVLPLIGEMTRMQPVYVGDVATAIADAVDGKAKAGAT 195
Query: 237 YQAVGPKRYLLSELLDWFHVVMKK 260
Y+ GP+ + E+++ + +
Sbjct: 196 YELGGPEVLTMREIIEAIVAIADR 219
>gi|448641140|ref|ZP_21677927.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
sinaiiensis ATCC 33800]
gi|445761665|gb|EMA12913.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
sinaiiensis ATCC 33800]
Length = 299
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 37/245 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G +LC L +QG + P D + + GD+ +
Sbjct: 5 VVGGTGFIGQHLCRALDEQGHAVTALSRSPEDATLPDGVE-TVAGDV----------TDY 53
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARL--------ARLSKEMGVEKFI 130
I A + + V L+ A D ++ R+ + ++E GV +F+
Sbjct: 54 GSIESAFEGQDAVYYLV----ALSPLFKPDGGDKMHERIHLGGTENSVQAAEEHGVNRFV 109
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
+SAL ADPN T+YI R+K Q E+ V + TIFRPS ++G G +F+ +
Sbjct: 110 QLSALGADPNGDTHYI-------RSKGQAEQVVTGSSLDWTIFRPSVVFGKGGEFVSFTK 162
Query: 191 HMWRHVFRKLAVYK---KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + +Y G +T QP++VGD+ +V + + + G+ Y+ GP+ L
Sbjct: 163 RLKGMFAPGVPLYPLPGGGSQTKFQPIWVGDLVPMLVDSIESEEHVGETYEIGGPEVLTL 222
Query: 248 SELLD 252
++ +
Sbjct: 223 RDVTN 227
>gi|448634440|ref|ZP_21674838.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
vallismortis ATCC 29715]
gi|445749413|gb|EMA00858.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
vallismortis ATCC 29715]
Length = 299
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 111/245 (45%), Gaps = 37/245 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G +LC +L ++G + P D + + GD+ +
Sbjct: 5 VVGGTGFIGQHLCRELDERGHTVTALSRSPDDATLPDGVE-TVSGDV----------TDY 53
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARL--------ARLSKEMGVEKFI 130
I A + +VV L+ A D + R+ + ++E GV++F+
Sbjct: 54 GSIESAFEDQDVVYYLV----ALSPLFKPDGGDTMHERIHLGGTENSVQAAEEHGVDRFV 109
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
+SAL ADPN T+YI R+K + E+ V + TIFRPS ++G G +F+ +
Sbjct: 110 QLSALGADPNGDTHYI-------RSKGEAERVVTESSLDWTIFRPSVVFGEGGEFVSFTK 162
Query: 191 HMWRHVFRKLAVYK---KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + +Y G +T QP++VGD+ +V + + + G+ Y+ GP L
Sbjct: 163 RLKGMFAPGVPLYPLPGGGRQTKFQPIWVGDLVPMLVDSIESEEHVGETYEVGGPDVLTL 222
Query: 248 SELLD 252
++ +
Sbjct: 223 RDVTN 227
>gi|298244141|ref|ZP_06967947.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ktedonobacter
racemifer DSM 44963]
gi|297551622|gb|EFH85487.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ktedonobacter
racemifer DSM 44963]
Length = 299
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 21/247 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V GA+G++GS+L L QG Q+ R + L ++ V HP + ++
Sbjct: 4 VTGATGFIGSHLVTDLAGQGEQVRCLVRDRKKAEKSLP-GTNVELVEGSTIHP---ETLK 59
Query: 83 KAIKYSNVVINLI-----GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+A++ + V++ +E A ++ + NV L + ++E GV++ I I L
Sbjct: 60 EALQGIDTVVHAAFMTADRKESAENHYN--ETNVTGTRNLVKAAQEAGVKRIIEIGGLGT 117
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
P P Y+ G +Y E+ V + TI +PS ++G G F++ +
Sbjct: 118 KPGKPGSYMQG-------RYLAEQAVKESKLDWTIIQPSVLFGKGAPFIKGLSDLIASA- 169
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPKRYLLSELLDWFHV 256
+ G +T+ QP+ V DV I K+P+ GK Y GP+ Y SE+ D
Sbjct: 170 -PVVPLIGGGKTMFQPILVDDVVRVIEYVLKEPEQTKGKTYTIGGPEYYSFSEVFDLLLK 228
Query: 257 VMKKGEP 263
M K P
Sbjct: 229 TMGKSRP 235
>gi|134297209|ref|YP_001120944.1| NAD-dependent epimerase/dehydratase [Burkholderia vietnamiensis G4]
gi|134140366|gb|ABO56109.1| NAD-dependent epimerase/dehydratase [Burkholderia vietnamiensis G4]
Length = 322
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 14/237 (5%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G +G++GS L N L + G + + R + R L++ + + +
Sbjct: 7 ALLGGTGFIGSRLVNALIEAGKHVRVATRRREH-ARHLQML----PIEIVELDALDARTL 61
Query: 82 RKAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ ++ +NLIG + A+V +PA L + GV + +H+SAL A
Sbjct: 62 TGFVAGAHAAVNLIGVLHGGRGSPYGPGFERAHVAVPAALGAACAQAGVRRVLHMSALGA 121
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
D N P+ Y+ TIFRPS ++G GD FL + +
Sbjct: 122 DSNGPSMYLRSKGDGEAALRAAAASAAAGPLALTIFRPSVVFGPGDAFLNTFAKLQ---- 177
Query: 198 RKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
R L V + QPV+VGDV A V A GK Y+ GP Y L +L+ +
Sbjct: 178 RTLPVLPLAMPDARFQPVFVGDVVRAFVNTLDLAAAHGKTYELGGPTVYTLEQLVRY 234
>gi|414176690|ref|ZP_11430919.1| hypothetical protein HMPREF9695_04565 [Afipia broomeae ATCC 49717]
gi|410886843|gb|EKS34655.1| hypothetical protein HMPREF9695_04565 [Afipia broomeae ATCC 49717]
Length = 322
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 11/233 (4%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G ++ L K+ +I + R L+ G +GQ+ + R
Sbjct: 8 LVTVFGGSGFLGRHVIRALAKRDYRIRVGVRRPEL-AGHLQPLGRVGQIHAVQANLRYPA 66
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
++ A + ++V++NL+G + T + +AR + E+G + +HISA+ AD
Sbjct: 67 SVQAAARGASVIVNLVGILSESGAQTFEAVQAKGAEAVARAASEIGA-RVVHISAIGADA 125
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
N S++ R K GE VL P ATI RPS ++G D+F + + R
Sbjct: 126 NST-------SRYARAKAAGEAAVLAAAPSATILRPSVVFGPEDQFTNRFAGLAR--ISP 176
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ G T QPVYVGDVA A+ A G Y+ GP+ + E+++
Sbjct: 177 VLPLIGGGLTKLQPVYVGDVANAVADAVDGKTRPGATYELGGPEVMTMREVIE 229
>gi|365887649|ref|ZP_09426475.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365336721|emb|CCD99006.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 322
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 104/228 (45%), Gaps = 17/228 (7%)
Query: 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
+ TVFG SG++G + L K+ +I + R L+ G +GQ+ + R
Sbjct: 7 TLVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPEL-AGHLQPLGRVGQIHTVQANLRYP 65
Query: 79 DEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + A++ S+V INL+G E + F DA A + + +H+SA+
Sbjct: 66 ESVAAALRDSHVAINLVGILTESGAQTF---DAVQAEGAATVAKAAAAAGARLVHVSAIG 122
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD + S + R K GE L PEA I RPS ++G D+F + + R
Sbjct: 123 ADAD-------SASSYARAKAAGEAASLAAVPEAVIMRPSVVFGPEDQFTNRFAGLARIA 175
Query: 197 -FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
F L G ET QPVYVGDVA A+ A AG Y+ GP+
Sbjct: 176 PFLPLV---GGGETKMQPVYVGDVATAVADAVDGKAQAGATYELGGPE 220
>gi|55379835|ref|YP_137685.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
marismortui ATCC 43049]
gi|55232560|gb|AAV47979.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
marismortui ATCC 43049]
Length = 299
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 37/245 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G +LC L +QG + P D + + GD+ +
Sbjct: 5 VVGGTGFIGQHLCRALDEQGHAVTALSRSPEDATLPDGVE-TVAGDV----------TDY 53
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARL--------ARLSKEMGVEKFI 130
I A + + V L+ A D ++ R+ + ++E GV +F+
Sbjct: 54 GSIESAFEGQDAVYYLV----ALSPLFKPDGGDKMHERIHLGGTENSVQAAEEHGVNRFV 109
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
+SAL ADPN T+YI R+K Q E+ V + TIFRPS ++G G +F+ +
Sbjct: 110 QLSALGADPNGDTHYI-------RSKGQAEQVVTGSSLDWTIFRPSVVFGKGGEFVSFTK 162
Query: 191 HMWRHVFRKLAVYK---KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + +Y G +T QP++VGD+ +V + + + G+ Y+ GP+ L
Sbjct: 163 RLKGMFAPGVPLYPLPGGGSQTKFQPIWVGDLVPMLVDSIESEEHVGEAYEIGGPEVLTL 222
Query: 248 SELLD 252
++ +
Sbjct: 223 RDVTN 227
>gi|448584305|ref|ZP_21647179.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax gibbonsii
ATCC 33959]
gi|445728203|gb|ELZ79809.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax gibbonsii
ATCC 33959]
Length = 301
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 125/288 (43%), Gaps = 46/288 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRG-NFYDVRD--LRLCGDLGQVLFQPYHPRNDD 79
V G SG++GS+LC +L +G + R N D+ D + GD+ + D
Sbjct: 5 VVGGSGFIGSHLCRELQSRGHSVTAMSRSPNSEDLPDGVEKAMGDV----------TDYD 54
Query: 80 EIRKAIKYSNVVINLIGRE--FATK--NFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
I A + + V+NL+ F K N + + + + ++ V + + +SAL
Sbjct: 55 SIAGAFEGKDAVVNLVALSPLFEPKGGNRMHDIVHWQGTENVVKAAEANDVSRLVQMSAL 114
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD + T YI R+K + E+ V + IFRPS ++G G +F+ + +
Sbjct: 115 GADTDGDTAYI-------RSKGKAEQAVKSSGLDWVIFRPSVVFGDGGEFVSFTKRLKGM 167
Query: 196 VFRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ +Y +T QP++VGD+ + +D D G+ Y+ GP++ L E+ +
Sbjct: 168 FAPGVPLYPLPGNGKTRFQPIWVGDLVPMLADGVEDDDRVGETYRIGGPEKLTLREITEM 227
Query: 254 FHVVMKKGEPDYGYYRYDLRYDPVMPL-------KLFINGLFPGYPMG 294
Y + + ++PL L + G PG+PMG
Sbjct: 228 V-------------YDAENKSITIVPLPMGLAGVGLTVLGAVPGFPMG 262
>gi|419797380|ref|ZP_14322865.1| RmlD substrate binding domain protein [Neisseria sicca VK64]
gi|385698211|gb|EIG28587.1| RmlD substrate binding domain protein [Neisseria sicca VK64]
Length = 279
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 115/274 (41%), Gaps = 44/274 (16%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG SG++GS L +QG Q+ P R F D HP ++ R
Sbjct: 5 IFGGSGFIGSRTAQILKEQGHQVWTPDRRAF----------DF-------LHP-DETAAR 46
Query: 83 KAIKYSNVVINLIGREFATKNFTIADA-NVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+ ++ +V+IN IG +++ I + + P +LA +K G+++++ +SAL ADP+
Sbjct: 47 RLLEGQDVLINCIG--IMSRHAEILETVHHRTPKQLAAWAKAAGIKRWVQLSALGADPSQ 104
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P ++ +K +G+ V + I RPS +YG G +F KLA
Sbjct: 105 PINFVG-------SKGRGDDAVAQSSIPIAIARPSVVYGRGGTSCE--------LFIKLA 149
Query: 202 -----VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
+G QPV++ DVA + D I G + L+E L
Sbjct: 150 HLPLLPLPEGGRFYLQPVHLADVAEGLAKLAVQTDTGHNIINMTGSQTLTLAEYLTTLRQ 209
Query: 257 VMKKGEPDYGYYRYDLRY-DPVMPL-KLFINGLF 288
+ P + LR DP +PL NG+
Sbjct: 210 TLHHKPPQH-ILPVPLRLIDPALPLANTLSNGII 242
>gi|172061984|ref|YP_001809636.1| NADH dehydrogenase (ubiquinone) [Burkholderia ambifaria MC40-6]
gi|171994501|gb|ACB65420.1| NADH dehydrogenase (ubiquinone) [Burkholderia ambifaria MC40-6]
Length = 319
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 110/240 (45%), Gaps = 25/240 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++GS L N L G + I R + R L++ V + +
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKHVRIGTRRRDH-ARHLQML----PVEIVELDALDTRTLA 62
Query: 83 KAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + ++ INL+G + A+V +PA LA E+GV++ +H+SAL AD
Sbjct: 63 RFVAGAHAAINLVGVLHDGRGTPYGPGFERAHVALPAALAAACVEVGVQRVLHMSALGAD 122
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEV----LREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ G S + R+K GE + + TIFRPS ++G GD FL + ++ R
Sbjct: 123 SH-------GASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDTFLNTFANLQR 175
Query: 195 HVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
L V + QPV+VGDV +A V A GK Y+ GP Y L +L+ +
Sbjct: 176 ----TLPVLPLAMPDARFQPVFVGDVVSAFVNTLDLTAAHGKTYELGGPTVYTLEQLVRY 231
>gi|416925287|ref|ZP_11932948.1| NAD-dependent epimerase/dehydratase, partial [Burkholderia sp.
TJI49]
gi|325526513|gb|EGD04075.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. TJI49]
Length = 286
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Query: 109 ANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV----L 164
A+V +PA LA E+GV + +H+SAL AD + P+ Y R+K GE +
Sbjct: 60 AHVALPAALASACIEVGVRRVLHMSALGADSHGPSMY-------QRSKGDGEAALHAVAA 112
Query: 165 REFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIK-QPVYVGDVAAAI 223
+ TIFRPS ++G GD FL + + R L V + QPV+VGDV A
Sbjct: 113 TDSLALTIFRPSVLFGPGDAFLNTFARLQ----RTLPVLPLAMPDARFQPVFVGDVVRAF 168
Query: 224 VAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
V + GK Y+ GP Y L +L+ +
Sbjct: 169 VNTLDLAASYGKTYELGGPTVYTLEQLVRY 198
>gi|170699650|ref|ZP_02890688.1| NADH dehydrogenase [Burkholderia ambifaria IOP40-10]
gi|170135466|gb|EDT03756.1| NADH dehydrogenase [Burkholderia ambifaria IOP40-10]
Length = 319
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 31/280 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ G +G++GS L N L G + I R + R L++ V + +
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKHVRIGTRRREH-ARHLQML----PVEIVELDALDTRTLA 62
Query: 83 KAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHISALNAD 138
+ + ++ INL+G + A+V +PA LA E+GV + +H+SAL AD
Sbjct: 63 RFVAGAHAAINLVGVLHDGRGTPYGPGFERAHVALPAALAAACVEVGVRRVLHMSALGAD 122
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEV----LREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
+ G S + R+K GE + + TIFRPS ++G GD FL + ++ R
Sbjct: 123 SH-------GASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDTFLNTFANLQR 175
Query: 195 HVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
L V + QPV+VGDV +A V A GK Y+ GP Y L +L+ +
Sbjct: 176 ----TLPVLPLAMPDARFQPVFVGDVVSAFVNTLDLTAAHGKTYELGGPTVYTLEQLVRY 231
Query: 254 FHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPM 293
++ + R D + L+ + PG PM
Sbjct: 232 CGTLVGR------QARIVRLPDALARLQASVFECLPGEPM 265
>gi|448360008|ref|ZP_21548653.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
gi|445641303|gb|ELY94385.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
Length = 309
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 25/240 (10%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++GS+LC +L ++ ++ R N L D V + I
Sbjct: 5 VAGGTGFIGSHLCTELVERDHEVTSLSR-NPTSEDAANLPDD---VTLASGDVSDYGTIA 60
Query: 83 KAIKYSNVVINLIGRE------FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
+ + V+N + T + T+ E L R +++ +E+F+ ISAL
Sbjct: 61 DTVDGHDAVVNFVSLSPLYQLPSGTDHETVHLGGTE---NLIRAAEDGDIERFVQISALG 117
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA-TIFRPSDMYGSGDKFLRYYGHMWRH 195
ADP+ PT YI R K + E E++RE TI RPS ++G G +FL + +
Sbjct: 118 ADPDGPTPYI-------RAKGRAE-EIVREAALGWTIVRPSIVFGDGAEFLEFTKQLTTP 169
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
L G ET QP++VGD A + +D G+ Y+ GP+ L++ + +
Sbjct: 170 YVTGL---PGGGETRFQPIWVGDFAPILADVLEDDSHVGQTYEIGGPQIVTLADATELIY 226
>gi|448622690|ref|ZP_21669365.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax
denitrificans ATCC 35960]
gi|445754049|gb|EMA05463.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax
denitrificans ATCC 35960]
Length = 301
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 46/288 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRG-NFYDVRD--LRLCGDLGQVLFQPYHPRNDD 79
V G SG++GS+LC +L +G + R N D+ D + GD+ + D
Sbjct: 5 VVGGSGFIGSHLCRELQSRGHSVTAMSRSPNSEDLPDGVEKAMGDV----------TDYD 54
Query: 80 EIRKAIKYSNVVINLIGR----EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
I A + + V+NL+ E N + + + + ++ V + + +SAL
Sbjct: 55 SIAGAFEGKDAVVNLVALSPLFEPGGGNRMHDIVHWQGTENVVKAAEANDVPRLVQMSAL 114
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD + T YI R+K + E V + IFRPS ++G G +F+ + +
Sbjct: 115 GADTDGDTAYI-------RSKGKAEGAVKSSGLDWVIFRPSVVFGDGGEFVSFTKRLKGM 167
Query: 196 VFRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ +Y ET QP++VGD+A + A + + G+ Y+ GP++ L E+ +
Sbjct: 168 FAPGVPLYPLPGNGETRFQPIWVGDLAPMLADAVEGDEHVGETYRIGGPEKLTLREITEM 227
Query: 254 FHVVMKKGEPDYGYYRYDLRYDPVMPL-------KLFINGLFPGYPMG 294
Y + + ++PL L + G PG+PMG
Sbjct: 228 V-------------YDAENKSITIVPLPMGLAGVGLTVLGAVPGFPMG 262
>gi|254455649|ref|ZP_05069078.1| probable NADH-ubiquinone oxireductase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082651|gb|EDZ60077.1| probable NADH-ubiquinone oxireductase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 309
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKN-FTIADANVEIPARLARLSKEMGVEKFIHISAL 135
++ +IR K +++ INLIG F K T + + P+ LA+L KE ++ FIH+SAL
Sbjct: 44 DEKKIRALFKKTDICINLIGILFEQKKGNTFKNIHSIFPSLLAKLCKEYNLKHFIHLSAL 103
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
+ + S++ ++K +GE VL+ FP ATI RPS +Y D F + +
Sbjct: 104 GIND-------AVDSEYAKSKLEGENNVLKNFPLATILRPSIVYSVDDNFTTNFMTLLNR 156
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ +Y +G +T P++ D+ I + KI + GP+ ELL
Sbjct: 157 L-PIFPLYYEG-KTKFAPIHCSDLTDTINHII-SKNIYSKIIECTGPEIISFKELLQKLL 213
Query: 256 VVMKK 260
++ K
Sbjct: 214 YLINK 218
>gi|395792640|ref|ZP_10472064.1| hypothetical protein MEI_00685 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|423713302|ref|ZP_17687562.1| hypothetical protein ME1_00308 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395423343|gb|EJF89538.1| hypothetical protein ME1_00308 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395432197|gb|EJF98186.1| hypothetical protein MEI_00685 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 332
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 11/231 (4%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G ++ L K+G ++ I R L++ G++GQ ++ +
Sbjct: 15 TVFGGSGFVGRHVVETLTKRGYRVRIAVRCPQKAYYMLQI-GEVGQTQMLKTDIKHRASV 73
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ + + L G ++ ++ L+ E G+ +++SAL A+ N
Sbjct: 74 ARALLGAEGAVFLPGSLTQANQSNFQKIQIDGTQNVSELTAEAGI-PLLYMSALVANENA 132
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
Y R K EK V + P+A I RPS ++G D F + R F +
Sbjct: 133 SFLY-------ARVKSMCEKIVHSKHPQAIIMRPSVIFGPEDCFFNTLANFSR--FLPIM 183
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
G ++ QPVYVGD+A +V A + +GK Y GP+ +L+
Sbjct: 184 PLFGGGQSKLQPVYVGDIAEFVVRALEGQVISGKSYDLGGPQTVTFQNVLE 234
>gi|402565210|ref|YP_006614555.1| NADH dehydrogenase [Burkholderia cepacia GG4]
gi|402246407|gb|AFQ46861.1| NADH dehydrogenase [Burkholderia cepacia GG4]
Length = 318
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 25/241 (10%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G +G++GS L N L G Q+ I R + R L++ V + +
Sbjct: 6 ALLGGTGFIGSRLVNALIDAGKQVRIGTRRREH-ARHLQML----PVEIVELDALDTRTL 60
Query: 82 RKAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ + ++ +NL+G + A+V +PA LA E+GV++ +H+SAL A
Sbjct: 61 ARFVAGAHAAVNLVGVLHGGRGTPYGPGFERAHVALPAALAAACVEVGVQRVLHMSALGA 120
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEV----LREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
D + G S + R+K GE + + TIFRPS ++G GD FL + ++
Sbjct: 121 DSH-------GASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDAFLNTFANLQ 173
Query: 194 RHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
R L V + QPV+VGDV A V A G+ Y+ GP Y L +L+
Sbjct: 174 ----RTLPVLPLAMPDARFQPVFVGDVVRAFVNTLDLAAAYGRTYELGGPTVYTLEQLVR 229
Query: 253 W 253
+
Sbjct: 230 Y 230
>gi|319898225|ref|YP_004158318.1| NADH-ubiquinone oxidoreductase [Bartonella clarridgeiae 73]
gi|319402189|emb|CBI75720.1| putative NADH-ubiquinone oxidoreductase [Bartonella clarridgeiae
73]
Length = 332
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 15/243 (6%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR 76
N + TVFG SG++G Y+ L K+G ++ I R L++ G++GQ R
Sbjct: 10 NPKLITVFGGSGFVGRYIVETLTKRGYRVRIAVRCPQKAYYMLQI-GEVGQTQMLKTDVR 68
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
N + A+ ++ + L G T + V+ ++ L+ + G+ I++S L
Sbjct: 69 NYASVANALSGADGAVFLPGGLAQTNKPNFQNIQVDGARNVSELTIKAGIP-LIYMSTLI 127
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
D N Y R K E+ V P+A I R S ++G D F + R
Sbjct: 128 TDKNASFSYA-------RAKALSEQIVRNTHPQAIIMRSSVIFGPEDCFFNVLANFSR-- 178
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL----LSELLD 252
F + G ++ QPVYVGD+A +V A + GK Y GPK + L E+L
Sbjct: 179 FMPIMPLFGGGQSKLQPVYVGDIAKFVVHALEGHVILGKSYDLGGPKIFTFQNALEEILK 238
Query: 253 WFH 255
H
Sbjct: 239 VIH 241
>gi|222147276|ref|YP_002548233.1| NADH-ubiquinone oxidoreductase [Agrobacterium vitis S4]
gi|221734266|gb|ACM35229.1| NADH-ubiquinone oxidoreductase [Agrobacterium vitis S4]
Length = 325
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 18/247 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRND 78
+ TVFG SG++G ++ L ++G ++ + R D+ L G++GQ+ + R
Sbjct: 9 LVTVFGGSGFVGRHVVRVLAQRGYRVRVAVRRP--DLAGFVLPFGNVGQISLSQANLRYR 66
Query: 79 DEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
D + KA++ ++VV+N +G E F DA + AR + + +HISA+
Sbjct: 67 DSVAKAVEGASVVVNCVGILLESGRNKF---DAVQDFGARAVAEAATAAGARLVHISAIG 123
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
AD S + +K +GE + + P A I RPS ++G D F + M R
Sbjct: 124 AD-------AKSASSYAASKGRGEDAIRQVAPGAVILRPSIVFGPEDSFFNKFAAMAR-- 174
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
+ G +T QPV+V DVA A+ A AAG +++ GP+ + L+
Sbjct: 175 LSPVLPLIGGGKTKFQPVFVEDVAEAVAKAVDGKVAAG-LFELGGPEVLTFRQCLEEMLR 233
Query: 257 VMKKGEP 263
V+ + P
Sbjct: 234 VIDRTNP 240
>gi|451941339|ref|YP_007461976.1| NADH-ubiquinone oxidoreductase [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451900726|gb|AGF75188.1| NADH-ubiquinone oxidoreductase [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 332
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G Y+ L K+G ++ I R L++ G++GQ ++ +
Sbjct: 15 TVFGGSGFVGRYVVEALTKRGYRVRIAVRCPQKAYYMLQI-GEVGQTQMLKTDIKHRASV 73
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ + + L G + ++ ++ L+ E G+ +++SAL A+ N
Sbjct: 74 ARALLGAESAVFLPGSLAQANQSSFQTTQIDGTQNVSELTAEAGI-PLLYMSALVANENA 132
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
Y R K EK V + P+A I RPS ++G D F + F +
Sbjct: 133 SFLY-------ARVKSMCEKIVQSKHPQAIIMRPSVIFGPEDCFFNTLANF--SCFLPIM 183
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
G ++ QPVY+GD+A +V A + +GK Y GP+ L+
Sbjct: 184 PLFGGGQSKLQPVYIGDIAEFVVRALEGQVLSGKSYDLGGPQIVTFQNTLE 234
>gi|340362783|ref|ZP_08685151.1| hypothetical protein HMPREF9418_1758 [Neisseria macacae ATCC 33926]
gi|339887065|gb|EGQ76662.1| hypothetical protein HMPREF9418_1758 [Neisseria macacae ATCC 33926]
Length = 279
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 114/274 (41%), Gaps = 44/274 (16%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG SG++GS L +QG Q+ P R F D HP ++ R
Sbjct: 5 IFGGSGFIGSRTAQILKEQGHQVYTPDRRAF----DF-------------LHP-DETAAR 46
Query: 83 KAIKYSNVVINLIGREFATKNFTIADA-NVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+ ++ +V+IN IG +++ I + + P +LA +K G++ ++ +SAL ADP
Sbjct: 47 RLLEGQDVLINCIG--IMSRHAEILETVHHRTPKQLAAWAKTAGIKHWVQLSALGADP-- 102
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
S F +K +G+ V + I RPS +YG G +F KLA
Sbjct: 103 -----SQSINFVGSKGRGDNAVAQSSIPIAIARPSVVYGRGGTSCE--------LFIKLA 149
Query: 202 -----VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256
+G QPV++ DVA + DA I G + L+E L
Sbjct: 150 HLPLLPLPEGGRFYLQPVHLADVAEGLAKLAVQTDAGHSIVNMTGSQTLTLAEYLTTLRQ 209
Query: 257 VMKKGEPDYGYYRYDLR-YDPVMPL-KLFINGLF 288
+ P + LR DP +PL + NG+
Sbjct: 210 TLHHKPPQH-ILPIPLRLLDPALPLANILSNGII 242
>gi|23296078|gb|AAN12295.1| NADH dehydrogenase [Aquifex pyrophilus]
Length = 314
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 111/239 (46%), Gaps = 28/239 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEI 81
+ G++G++G ++ KL ++G +++ R + LR L GD + + + D E
Sbjct: 5 ITGSTGFVGRHITRKLLEEGHEVVAGVRS----LEKLRNLFGDSVRGI------KLDFEN 54
Query: 82 RKAIKY------SNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
RK + Y + VI+LIG E +K T + L SK GV KF+ +S
Sbjct: 55 RKEVFYVLNREKPDAVIHLIGILYELPSKGITFFKVHYLYTKYLVEASKNAGVRKFLFMS 114
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
AL P++Y ++TK EKEV+ TIFRPS + G K L Y +
Sbjct: 115 ALGTHDLAPSWY-------HQTKKWAEKEVINSGLNYTIFRPSIILGPEQK-LFYDMNKI 166
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ +A+ G+ QPV V DVA A A K+P+ KIY+ G K ELL
Sbjct: 167 TKLLPVVALPDFGKYPF-QPVDVRDVACAYAEALKNPETDRKIYELCGTKVVSFKELLS 224
>gi|170084313|ref|XP_001873380.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650932|gb|EDR15172.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 316
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 123/288 (42%), Gaps = 43/288 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V +G++GS++ L + I R L G P P ++
Sbjct: 7 VICGAGFIGSHIARSLIASQRPVQISSRNPAKTHELLEFTTPKG-----PLLPAVSVDVT 61
Query: 83 K------AIKYSNVVINLIGREFAT-KNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
K A K + +I+L+G T K+F D + +A ++ +G K IH SA+
Sbjct: 62 KPTTLIHAFKDAGTIISLVGVMHGTPKDF--EDVQWKGAENVALAARAVGA-KVIHFSAI 118
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
A+ Y ++TK GE VL P+ATI RPS ++G D F + + R
Sbjct: 119 GANTKSEIMY-------FKTKAMGENSVLDICPDATIIRPSLVFGPEDDFFNRFARLSR- 170
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK-----DPDAAGKIYQAVGPKRYLLSEL 250
V L V+ G+ QPVYVGD++ A+ C+ + +GKI +A GP+ + +L
Sbjct: 171 VLPFLPVFGGGKSRF-QPVYVGDLSKAVEILCRGTPEIKKETSGKIIEAGGPEVFTYHQL 229
Query: 251 LDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGHLTP 298
++ +Y R+ P++ F GL G + +L P
Sbjct: 230 MEL-------------VLKYSGRHRPIISFP-FPFGLLQGAILENLPP 263
>gi|73539926|ref|YP_294446.1| NAD-dependent epimerase/dehydratase [Ralstonia eutropha JMP134]
gi|72117339|gb|AAZ59602.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid
dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase
[Ralstonia eutropha JMP134]
Length = 340
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 23 VFGASGYMGSYLCNKL-------------GKQGSQIIIPYR-----GNFYDVRDLRLCGD 64
+ G +G++GS+L ++L G I P R N + L L
Sbjct: 8 IVGGAGFIGSHLASRLAGAASASGAPLEPGSNPDSPIAPERIVIGTRNVEHAQHLLLLPR 67
Query: 65 LGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNF----TIADANVEIPARLARL 120
+ V D+ + +V+NL+G + A A+VEI ++
Sbjct: 68 VEVVELGLADNAALDDAIGPLGTDGIVVNLVGVLHGERGDPYGPEFAAAHVEIVEQVVGS 127
Query: 121 SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYG 180
GV + +H+SAL AD P+ Y R+K GE+ V + T+FRPS ++G
Sbjct: 128 CLRTGVRRLLHMSALGADSRGPSMY-------QRSKGDGERLVRDSGLDWTVFRPSVVFG 180
Query: 181 SGDKFLRYYGHMWRHVFRKLA--VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238
D FL + HM +++A V QP+YV DV A V A P G Y
Sbjct: 181 PDDHFLNLFAHM-----QEIAPVVPLACAHARFQPIYVLDVVQAFVNAMVTPATIGHGYD 235
Query: 239 AVGPKRYLLSELL 251
GP Y L EL+
Sbjct: 236 LGGPTVYTLEELV 248
>gi|221199726|ref|ZP_03572769.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans
CGD2M]
gi|221208669|ref|ZP_03581669.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans CGD2]
gi|421468607|ref|ZP_15917137.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
multivorans ATCC BAA-247]
gi|221171480|gb|EEE03927.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans CGD2]
gi|221179965|gb|EEE12369.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans
CGD2M]
gi|400231649|gb|EJO61329.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
multivorans ATCC BAA-247]
Length = 319
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 25/247 (10%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
+G + G +G++GS L L G + I R + L D+ V + +
Sbjct: 1 MDGQTVALLGGTGFIGSRLVAALIDAGKHVRIGTRRREHARHLSMLPVDI--VELETFDT 58
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFT----IADANVEIPARLARLSKEMGVEKFIH 131
R+ + + + + +NL+G + A+V +PA LAR E GV + +H
Sbjct: 59 RS---LARFVAGAQAAVNLVGVLHGGRGTPYGAGFERAHVALPAALARACAEAGVRRVLH 115
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGEKEV----LREFPEATIFRPSDMYGSGDKFLR 187
+SAL AD + P+ Y R+K GE + E TIFRPS ++G GD FL
Sbjct: 116 MSALGADSHGPSMY-------QRSKGDGEAALHAIAATEPLAVTIFRPSVVFGPGDAFLN 168
Query: 188 YYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYL 246
+ + R LA+ + QPV+VGDV A V + A G+ Y+ GP Y
Sbjct: 169 TFARLQRVAPVLPLAM----PDARFQPVFVGDVVRAFVNTLELSAAHGRTYELGGPTVYT 224
Query: 247 LSELLDW 253
L +L+ +
Sbjct: 225 LEQLVRY 231
>gi|339008006|ref|ZP_08640580.1| hypothetical protein BRLA_c17930 [Brevibacillus laterosporus LMG
15441]
gi|338775209|gb|EGP34738.1| hypothetical protein BRLA_c17930 [Brevibacillus laterosporus LMG
15441]
Length = 308
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 117/247 (47%), Gaps = 33/247 (13%)
Query: 10 TGGRSSF--NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLG 66
TGG S F +G++A + AS + + L +QGS++ + F L L GD+
Sbjct: 6 TGG-SGFVGHGIIAALLEAS-----HEVHCLLRQGSEL--KMKKLFSKTDHLHLHTGDIF 57
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEM 124
+ D +R A++ + VI+L+G RE A K T + +VE + +++KE+
Sbjct: 58 AI----------DSLRAAMRDCDAVIHLVGIIREQAGKEITFSRIHVEGTHNVLQVAKEL 107
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
+ +FI +SAL P +SG +++TKY+ E+ V IFRPS ++G GD+
Sbjct: 108 AIRRFIFMSALGTRPQA----VSG---YHQTKYEAEQLVSASGIPYVIFRPSVIFGPGDE 160
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
F+ + R V G + QPV VA A + A +IY+ GP +
Sbjct: 161 FVTMLADLVR--LPVTPVIGSGTYLL-QPVSRKTVAEVFTQALTNELATNQIYEVGGPHQ 217
Query: 245 YLLSELL 251
++L
Sbjct: 218 LSYMQIL 224
>gi|421475127|ref|ZP_15923107.1| NAD dependent epimerase/dehydratase domain protein, partial
[Burkholderia multivorans CF2]
gi|400230806|gb|EJO60554.1| NAD dependent epimerase/dehydratase domain protein, partial
[Burkholderia multivorans CF2]
Length = 224
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 113 IPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV----LREFP 168
+PA LAR E GV + +H+SAL AD + P+ Y R+K GE + E
Sbjct: 2 LPAALARACVEAGVRRVLHMSALGADSHGPSMY-------QRSKGDGEAALHAIAATEPL 54
Query: 169 EATIFRPSDMYGSGDKFLRYYGHMWRHV-FRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227
TIFRPS ++G GD FL + + R LA+ + QPV+VGDV A V
Sbjct: 55 AVTIFRPSVVFGPGDAFLNTFARLQRIAPVLPLAM----PDARFQPVFVGDVVRAFVNTL 110
Query: 228 KDPDAAGKIYQAVGPKRYLLSELLDW 253
+ A G+ Y+ GP Y L +L+ +
Sbjct: 111 ELSAAHGRTYELGGPTVYTLEQLVRY 136
>gi|297565908|ref|YP_003684880.1| NAD-dependent epimerase/dehydratase [Meiothermus silvanus DSM 9946]
gi|296850357|gb|ADH63372.1| NAD-dependent epimerase/dehydratase [Meiothermus silvanus DSM 9946]
Length = 309
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ G +G++G++L L ++G ++ + R G R +R G+ L
Sbjct: 5 IVGGTGFVGTHLTRCLLQKGHRVQVLSRQGTGLVSGARYIRGNAATGEGL---------- 54
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
A+K + VI L+ + T A VE ++ GV +++H+SAL A
Sbjct: 55 --APAMKDAEAVIYLVAIIRERGDQTFQQAIVEGTRNTLEAARAAGVRRYLHMSALGAAR 112
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF----LR------YY 189
GS+++ K + E+ V + TIFRPS ++G GD F LR
Sbjct: 113 GT-------GSRYFEAKAEAEERVRDSGLDWTIFRPSLIFGEGDDFFGGVLRGLVQGGSQ 165
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
+W + + G + PV+VGDV+ A A + P G+ Y+ VGP+ Y E
Sbjct: 166 NGLWYPPLPVIPLIGDGHFPFR-PVWVGDVSEAFAQALEKPQTIGQTYELVGPQEYTFRE 224
Query: 250 LLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGL-------FPGYPM 293
L+ + P++P+ +F+ L PG+P+
Sbjct: 225 LVLRVRDALGS-------------RKPLLPIPIFLMDLALPLLSRIPGFPL 262
>gi|448738094|ref|ZP_21720125.1| NAD-dependent epimerase/dehydratase [Halococcus thailandensis JCM
13552]
gi|445802678|gb|EMA52982.1| NAD-dependent epimerase/dehydratase [Halococcus thailandensis JCM
13552]
Length = 293
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 21/231 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G G++G LC++L ++G + R V + + +G V D +
Sbjct: 5 VTGGDGFVGRSLCDELAERGHDVTALSRDPDPTVFEQDVSTAVGDVTAY-------DSMV 57
Query: 83 KAIKYSNVVINLIGRE--FATKNFTI-ADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ + + V+NL+ F + T + ++ R ++E VE+F+ +SAL ADP
Sbjct: 58 EQFEGRDAVVNLVALSPLFQPPSGTSHREVHLRGTENAVRAAEEHSVERFVQMSALGADP 117
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ T YI RTK + E V + TIFRPS ++G G +F+ + +
Sbjct: 118 DGDTAYI-------RTKGRAEGVVRDSSLDWTIFRPSVVFGDGGEFVSFTKKVTPPY--- 167
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
LA +G T QP+++GD+ A ++A D + G+ Y+ GP L+++
Sbjct: 168 LAPLPRGGRTRFQPIWIGDL-APMLADGLDDEHVGETYELGGPAVLTLADV 217
>gi|319638275|ref|ZP_07993038.1| NAD-dependent epimerase/dehydratase [Neisseria mucosa C102]
gi|317400548|gb|EFV81206.1| NAD-dependent epimerase/dehydratase [Neisseria mucosa C102]
Length = 279
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 111/269 (41%), Gaps = 34/269 (12%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG SG++GS L +QG Q+ P R F HP ++ R
Sbjct: 5 IFGGSGFIGSRTAQILKEQGHQVCTPDRRA-----------------FDFLHP-DETAAR 46
Query: 83 KAIKYSNVVINLIGREFATKNFTIADA-NVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+ ++ +V+IN IG +++ I + + P +LA ++ G++ ++ +SAL ADP
Sbjct: 47 RLLEGQDVLINCIG--IMSRHAEILETVHHRTPKQLAAWARAAGIKHWVQLSALGADP-- 102
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
S F +K +G+ V + I RPS +YG G + + R L
Sbjct: 103 -----SQSINFVGSKGRGDDAVAQSGIPIAIARPSVVYGRGGTSCELFIKLAR---LPLL 154
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
+G QPV++ DVA + D I G + L+E L +
Sbjct: 155 PLPEGGRFHLQPVHLADVAEGLAKLATQTDTDHSIINMTGSQTLTLAEYLTTLRQTLHHK 214
Query: 262 EPDYGYYRYDLRY-DPVMPL-KLFINGLF 288
P + LR DP +PL L NG+
Sbjct: 215 LPQH-ILPVPLRLIDPALPLANLLSNGII 242
>gi|407461584|ref|YP_006772901.1| NAD-dependent epimerase/dehydratase [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045206|gb|AFS79959.1| NAD-dependent epimerase/dehydratase [Candidatus Nitrosopumilus
koreensis AR1]
Length = 289
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 48/268 (17%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDD 79
+ GASG++ L L ++ +I R NF ++ + + Q L P
Sbjct: 8 VITGASGFIAKNLRKYLSEKNVNLISISRKNFKSFKNETKIVSKNYEQKLLLP------- 60
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
IK S+ VI+LIG ++ ++ + NV++ ++ LSK+ V+KF++ S L
Sbjct: 61 ----KIKNSDAVIHLIGIGKQSIKTDYELI--NVQLTQKIVDLSKKAKVKKFVYTSGLGV 114
Query: 138 DPNPPT-YYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
+ P Y+IS K + EK ++ TIFRPS + G D F + H+ + +
Sbjct: 115 SKDTPLGYFIS--------KLKAEKSIINSKINYTIFRPSYIVGKDDLFTK---HLKKSI 163
Query: 197 FR-KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP-----KRYL---- 246
+ K+ + G +I QP+++ DV I + D KI VGP K+Y+
Sbjct: 164 KKNKVIIPGSGNYSI-QPIFINDVTKLIFQSIIDDRFNNKIIDLVGPEIISFKKYIQLFL 222
Query: 247 ------LS--ELLDWFHVVMKKGEPDYG 266
LS ++ D +H+ + + DYG
Sbjct: 223 QKKKTKLSHIDIEDAYHLAITNSKFDYG 250
>gi|347529310|ref|YP_004836058.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
sp. SYK-6]
gi|345137992|dbj|BAK67601.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
sp. SYK-6]
Length = 320
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 59 LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLA 118
+R G++GQ ++ A+ + +NL+G + A+V +A
Sbjct: 45 VRSLGNMGQTQLLAVDITKPGQVAAALAGAGAAVNLVG----LLKGDMVSAHVVGARNIA 100
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
+ G++ +H+SA+ ADP + S + +TK +GE V FP ATI RPS M
Sbjct: 101 EAAAAQGLDALVHVSAIGADP-------ASSSAYGKTKGEGEAAVRAAFPGATIVRPSIM 153
Query: 179 YGSGDKFLRYYGHMWRH-----VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA- 232
+G D F + + + R + + + ET QPV V DVA AI A + P+
Sbjct: 154 FGQDDGFTNRFAQLIATGSSVPLVRAVPLIRG--ETRFQPVNVADVARAIAQAVESPETF 211
Query: 233 AGKIYQAVGPKRYLLSELLDWF 254
G+ ++ GP L+++ W
Sbjct: 212 GGQTFELGGPDVMTLAQINHWI 233
>gi|448394449|ref|ZP_21568254.1| NAD-dependent epimerase/dehydratase [Haloterrigena salina JCM
13891]
gi|445662491|gb|ELZ15259.1| NAD-dependent epimerase/dehydratase [Haloterrigena salina JCM
13891]
Length = 306
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 34/237 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVL--FQPYHPRNDDE 80
V G +G++G+ LC +L ++G ++ R D D L + +V Y D
Sbjct: 5 VAGGTGFIGTPLCTELHERGHEVTALSR----DPSDTDLPAGVDRVAGDVSAY-----DS 55
Query: 81 IRKAIKYSNVVINLIG--------REFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
I + + + V+NL+ E A + + A L + +++ GV +F+ +
Sbjct: 56 IAETVAGHDAVVNLVSLSPLYQPPDEDAHERVHLGGT-----ANLVQAAEDGGVNRFLQM 110
Query: 133 SALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM 192
S L ADP+ T +F RTK E V TI RPS ++G G +FL + +
Sbjct: 111 SGLGADPDADT-------EFLRTKGAAEDVVTESRLAWTIVRPSVVFGDGAEFLEFTKQL 163
Query: 193 WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
L G +T QP++VGD+ + D G+ Y+ GP+ L++
Sbjct: 164 TTPYVTGL---PGGGKTRFQPIWVGDLVPMLADVLDDDTHVGETYEIAGPQIVTLAD 217
>gi|386401000|ref|ZP_10085778.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
WSM1253]
gi|385741626|gb|EIG61822.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
WSM1253]
Length = 287
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 27/232 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG +G++GS + L + I R D++L V ++ +
Sbjct: 1 MFGGTGFLGSRIARHLCSHKFPVRIASRHP-----DVQLQSVAANV-------HDERSVA 48
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
A+ + +N + T +VE +A ++ GVE+ +H+S + AD P
Sbjct: 49 NALVGAYGAVNAVSLYRERGGETFHSVHVEAAQIVAAQARRAGVERLVHVSGIGADAASP 108
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
+ YI R + +GE+ V EF A I RP+ M+G D FL G + + + R+L +
Sbjct: 109 SLYI-------RKRGEGERAVRAEFAGAFIVRPAVMFGPDDAFL---GTVLK-LLRRLPI 157
Query: 203 YK---KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
Y +G T QP +V DVA A+V + + +++ GP RY +LL
Sbjct: 158 YPMFGRG-RTRLQPAHVEDVAEAVVRIIERAEPHPTVFEFGGPTRYSYEQLL 208
>gi|322368400|ref|ZP_08042969.1| hypothetical protein ZOD2009_02920 [Haladaptatus paucihalophilus
DX253]
gi|320552416|gb|EFW94061.1| hypothetical protein ZOD2009_02920 [Haladaptatus paucihalophilus
DX253]
Length = 298
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 120/287 (41%), Gaps = 51/287 (17%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIII----PYRGNF-YDVRDLRLCGDLGQVLFQPYHPRN 77
V G +G++G +L +L +G ++ P F DV R GD+
Sbjct: 5 VTGGTGFIGRHLVRELHDRGHEVTALARSPDEAAFPADVE--RAMGDVTAYA-------- 54
Query: 78 DDEIRKAIKYSNVVINLIGRE---FATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
I A + VINL+ + ++ + R ++E GV K + +SA
Sbjct: 55 --SIEGAFAGQDAVINLVSLSPLFEPPRGLNHVRVHLGGTRNVVRAAEEHGVGKIVQMSA 112
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L ADP PT YI R K + E+ V TIFRPS ++G G +FL + +
Sbjct: 113 LGADPTGPTEYI-------RAKGRAEELVKGSDLRWTIFRPSVVFGEGSEFLSFTKKLTP 165
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
LA G +T QP++V D+ A I+A D GKIY+ GP+ L+E+
Sbjct: 166 PY---LAPLPGGGKTRFQPIWVDDL-APILADGLDESHDGKIYEIGGPEVLTLAEVAKLA 221
Query: 255 HVVMKKGEPDYGYYRYDLRYDPVMPLK-------LFINGLFPGYPMG 294
R + + V+P+ L + G PG+PMG
Sbjct: 222 R-------------RAEGQSVTVLPIPMELAGVGLKVGGAIPGFPMG 255
>gi|344210817|ref|YP_004795137.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
hispanica ATCC 33960]
gi|343782172|gb|AEM56149.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
hispanica ATCC 33960]
Length = 299
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 43/248 (17%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-------CGDLGQVLFQPYHP 75
V G +G++G +LC +L QG + R D L GD+ +
Sbjct: 5 VVGGTGFIGQHLCRELDDQGHTVTALSRSP----EDATLPSGVETVAGDVTEY------- 53
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARL--------ARLSKEMGVE 127
D I A + + V L+ A D E+ R+ + ++E V+
Sbjct: 54 ---DSIESAFEGQDAVYFLV----ALSPLFKPDGGDEMHERIHLGGTENSVQAAEEHDVD 106
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+F+ +SAL ADPN T+YI R+K + E+ V + TIFRPS ++G G +F+
Sbjct: 107 RFVQLSALGADPNGDTHYI-------RSKGRAEQVVTESSLDWTIFRPSVVFGEGGEFVS 159
Query: 188 YYGHMWRHVFRKLAVYK---KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
+ + + +Y G++T QP++VGD+ +V + + + + Y+ GP+
Sbjct: 160 FTKRLKGMFAPGVPLYPLPGGGKQTKFQPIWVGDLVPMLVNSIESEEHVVETYEIGGPEV 219
Query: 245 YLLSELLD 252
L ++ +
Sbjct: 220 LTLRDVTN 227
>gi|289549043|ref|YP_003474031.1| NAD-dependent epimerase/dehydratase [Thermocrinis albus DSM 14484]
gi|289182660|gb|ADC89904.1| NAD-dependent epimerase/dehydratase [Thermocrinis albus DSM 14484]
Length = 319
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 20/234 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V GA+G++G Y+ L ++G ++ R D + L D G+V +++ IR
Sbjct: 9 VTGATGFVGRYIVRGLLEKGYKVGALVR----DTQKLNRVFD-GKVEGYKVDFLDEEAIR 63
Query: 83 KAIKYSN--VVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
KA++ + V++LIG E + + + L + GV + +H+S+L
Sbjct: 64 KAVEDFSPYAVVHLIGILLEDKKRGYDFYTVHFLYSKVLYSVLAHTGVRRVLHMSSLGTH 123
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV-F 197
+ P+ Y +RTKY E+ + + TIFRPS + G R + MWR +
Sbjct: 124 RDAPSMY-------HRTKYMAEEFLKTLKLDFTIFRPSMILGPEQ---RLFSDMWRITKY 173
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ G + QPV V DVA A V + +DP GK Y+ GP+R +L+
Sbjct: 174 IPVVPLPGGGHYLFQPVDVRDVACAFVESLEDPSTFGKTYELCGPQRVSFRQLM 227
>gi|423711939|ref|ZP_17686244.1| hypothetical protein MCQ_00808 [Bartonella washoensis Sb944nv]
gi|395412787|gb|EJF79267.1| hypothetical protein MCQ_00808 [Bartonella washoensis Sb944nv]
Length = 332
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 17/239 (7%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPY 73
N + TVFG SG++G ++ L K+G ++ I R +Y ++ G++GQ
Sbjct: 10 NPKLITVFGGSGFVGRHVVEALTKRGYRVRIAVRYPQKAYYMLQ----IGEVGQTQMLKT 65
Query: 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
++ + +A+ ++ + L G + ++ L+ E G+ I++S
Sbjct: 66 DIKHRASVARALLGADGAVFLAGSLTQANQSNFQKIQTDGAQNVSELAAEAGI-PLIYMS 124
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
AL A+ N Y R K EK + + P+A I RPS ++G D F ++
Sbjct: 125 ALVANQNASFLY-------ARVKSMSEKIIQDKHPQAIIMRPSVIFGPEDCFFNTLANL- 176
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
F + G ++ QPVYVGD+A +V A + +GK Y GP+ +L+
Sbjct: 177 -SCFLPIIPLFGGGQSKLQPVYVGDIAEFVVRALEGQVISGKSYDLGGPQIITFQNVLE 234
>gi|392597732|gb|EIW87054.1| NAD(P)-binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 327
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
IH SA+ AD Y RTK GEK VL P ATI RPS ++G GD F
Sbjct: 120 LIHFSAIGADETSKVAY-------SRTKALGEKAVLAASPTATIIRPSIVFGPGDAFFNR 172
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI-VAACKDP----DAAGKIYQAVGPK 243
+ M R F G +T QPVYVGD+ A+ + + DP D +GKI +A GP+
Sbjct: 173 FAQMSR--FLPFMPVFGGGKTRFQPVYVGDIGRAVELLSRNDPEVEKDVSGKIIEAGGPE 230
Query: 244 RYLLSELL 251
+ E++
Sbjct: 231 VFTYEEIM 238
>gi|171464273|ref|YP_001798386.1| NAD-dependent epimerase/dehydratase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171193811|gb|ACB44772.1| NAD-dependent epimerase/dehydratase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 229
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 109 ANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP 168
A+V++P + + G+++++H+SAL AD N P+ + R+K GE V
Sbjct: 23 AHVDLPKNIITAMQLHGLKRYLHMSALGADSNGPSMH-------QRSKGDGEAAVKASNL 75
Query: 169 EATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228
+ TIFRPS ++G+ D+F + + + +F A+ + QPV V DVA+A V +
Sbjct: 76 DWTIFRPSVIFGAQDQFTNLFSKLTK-LFS--AIPLANHQAQFQPVSVDDVASAFVKSLS 132
Query: 229 DPDAAGKIYQAVGPKRYLLSELLDW 253
P + Y VGP Y + E++++
Sbjct: 133 MPQTIYQSYDLVGPTVYTMKEIVEF 157
>gi|395767547|ref|ZP_10448080.1| hypothetical protein MCS_01013 [Bartonella doshiae NCTC 12862]
gi|395413910|gb|EJF80363.1| hypothetical protein MCS_01013 [Bartonella doshiae NCTC 12862]
Length = 332
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G ++ L K+G ++ I R L++ G++GQ ++ +
Sbjct: 15 TVFGGSGFVGRHIVETLTKRGYRVRIAVRRPQKAYYMLQI-GEVGQTQMLQTDIKHRASV 73
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ ++ + L G + ++ ++ L+ E G+ I++SAL A+ N
Sbjct: 74 ARALLGADGAVFLPGSLAQANQSNFQNIQIDGTQNVSELTAEAGIP-LIYMSALVANQNT 132
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
Y R K EK V + P+A I RPS ++G D F + R F +
Sbjct: 133 SCLY-------ARVKALSEKIVQNKHPQAIIMRPSVIFGPEDYFFNTLADLSR--FLPIM 183
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
G ++ QPVYVGD+A + + GK Y GP+ +L+
Sbjct: 184 PLFGGGQSKLQPVYVGDIAEFVARVLEGKVIFGKSYDLGGPQIMTFQNILE 234
>gi|430762880|ref|YP_007218737.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430012504|gb|AGA35256.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 205
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 126 VEKFIHISALNAD-PNPPTYYISGGSQFYRTKYQGEKEVL--REFPEATIFRPSDMYGSG 182
+ +F+ +SAL AD P+PP SQ+ R+K + E+ V FP T+FRPS ++G
Sbjct: 1 MRRFVQMSALKADMPDPP-------SQYLRSKAEAERAVFAASAFP-VTVFRPSVIFGPE 52
Query: 183 DKFL-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
D FL R+ G + F LA E PV+VGDVA V DP GK ++ G
Sbjct: 53 DSFLNRFAGLLKIAPFMPLA----RAEARFAPVFVGDVADHFVNCLDDPATFGKGFELCG 108
Query: 242 PKRYLLSELLDWFHVVMKKGEP 263
P+ Y L EL+ + + ++ P
Sbjct: 109 PRIYTLRELVRYTARLTRRRRP 130
>gi|448320265|ref|ZP_21509753.1| NAD-dependent epimerase/dehydratase [Natronococcus amylolyticus DSM
10524]
gi|445606671|gb|ELY60575.1| NAD-dependent epimerase/dehydratase [Natronococcus amylolyticus DSM
10524]
Length = 301
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 30/238 (12%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-----RLCGDLGQVLFQPYHPRN 77
V G +G++G++LC +L ++G + R D DL R GD
Sbjct: 5 VAGGTGFIGTHLCMELHERGHDVTALSRSP--DEADLPPEIDRAMGDASAY--------- 53
Query: 78 DDEIRKAIKYSNVVINLIGRE---FATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
D I + ++ + V+NL+ + + + ++ L R +E GV++F+ +SA
Sbjct: 54 -DSIVEEVEGHDAVVNLVSLSPLYEPPEGTSHQEVHLGGTKNLVRACEERGVDRFVQMSA 112
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L AD + T YI R+K + E V E TI RPS ++G G +F+ + +
Sbjct: 113 LGADADGATDYI-------RSKGRAESVVTGSDLEWTIVRPSVVFGDGGEFVDFTKQLTT 165
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
L G +T QP++VGD+ + +D G+ Y+ GP+ L+++ +
Sbjct: 166 PHITGL---PGGGKTRFQPIWVGDLVPMLADILEDDTHVGETYEFAGPQVATLADVTE 220
>gi|414341234|ref|YP_006982755.1| oxidoreductase [Gluconobacter oxydans H24]
gi|411026569|gb|AFV99823.1| oxidoreductase [Gluconobacter oxydans H24]
Length = 324
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 15/233 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G G++G KL G + I + N ++ L G+V F + D++
Sbjct: 20 AVLGGGGFIGRSFVRKLVATGHVVRIGSQ-NPEAIQGLGKARGTGRVEFLKVSVSDADQL 78
Query: 82 RKAIKYSNVVINLIGREFATKNF-TIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
+ ++ +NL+ T + + NV+ A ++ GV++++H+SA+ A
Sbjct: 79 DRLFDGADAAVNLV--SVMTPDIRVLHKINVDGAHLAAVRARRAGVKQYVHMSAIGASLT 136
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
P Y R+K E+ V R FP+A + RPS ++G D F + + V L
Sbjct: 137 SPGAY-------GRSKGAAEQVVRRVFPDAGLLRPSVVFGPEDSFFNLFA-LIAAVSPVL 188
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
V+ + T QPV+V DVA A++ +P+ AG+I +A GP + +++ +
Sbjct: 189 PVF--AQHTHYQPVFVEDVAEALLRLL-EPEHAGRIVEAGGPDILSMRDMMAF 238
>gi|395778924|ref|ZP_10459435.1| hypothetical protein MCU_01136 [Bartonella elizabethae Re6043vi]
gi|423714772|ref|ZP_17688996.1| hypothetical protein MEE_00197 [Bartonella elizabethae F9251]
gi|395417099|gb|EJF83451.1| hypothetical protein MCU_01136 [Bartonella elizabethae Re6043vi]
gi|395430991|gb|EJF97019.1| hypothetical protein MEE_00197 [Bartonella elizabethae F9251]
Length = 332
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 11/222 (4%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G ++ L K+G ++ I R L++ G++GQ ++ +
Sbjct: 15 TVFGGSGFVGRHVVETLTKRGYRVRIAVRCPQKAYYMLQI-GEVGQTQMLKTDIKHRASV 73
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ ++ + L G ++ +A L+ E G+ I++S L A N
Sbjct: 74 ARALLGADAAVFLPGSLKQANQSNFKSTQIDGTYNVAELTAEAGIP-LIYMSTLVAKENA 132
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
Y R K+ GE+ + + +A I RPS ++G D F + R F +
Sbjct: 133 SCLY-------ARVKFMGEQIIHNKHSQAIIIRPSVIFGPEDCFFNTLADLSR--FLPIM 183
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
G ++ QPVYVGDVA I A + GK Y GP+
Sbjct: 184 PLFGGGQSKLQPVYVGDVAEFIARALDGQVSWGKNYDLGGPQ 225
>gi|357037329|ref|ZP_09099129.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum gibsoniae DSM
7213]
gi|355361494|gb|EHG09249.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum gibsoniae DSM
7213]
Length = 302
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 112/253 (44%), Gaps = 22/253 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL--GQVLFQPYHPRN 77
V V G +G +G L + L K+G + VR + G++ G + F +
Sbjct: 3 VILVTGGTGLVGKPLVSALVKKGHTV-------RCLVRSPQKAGEVLPGGIEFVQGEIND 55
Query: 78 DDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ + KA + + VI+L+ RE + F NVE L + + V+ FIH+SAL
Sbjct: 56 PESVNKACQGVDKVIHLVAIIREHGEQTF--ERINVEGTLNLVIAAGQAEVKHFIHMSAL 113
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
A N Y+ +K++GE+ V + + TI RPS +YG G F +
Sbjct: 114 GACDNSRYKYVY-------SKWRGEEAVRQSGLKWTILRPSVIYGMGFNFFNRMIQSLQM 166
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
R T+ QP+ V DV ++ C++ D G+I + GP+ +++LD
Sbjct: 167 FPRPFVPVPGRGSTLFQPIAVEDVVRCLLRICENSDMVGRIIEIGGPEHLSYAQMLD--R 224
Query: 256 VVMKKGEPDYGYY 268
++ GE Y Y
Sbjct: 225 LMESLGEKRYKLY 237
>gi|319404944|emb|CBI78546.1| NADH-ubiquinone oxidoreductase [Bartonella sp. AR 15-3]
Length = 338
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 107/243 (44%), Gaps = 15/243 (6%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR 76
N + TVFG SG++G ++ L K+G ++ I R L++ G++GQ R
Sbjct: 16 NPKLITVFGGSGFVGRHVVETLTKRGYRVRIAVRCPQKAYYMLQI-GEVGQTQMLKTDVR 74
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
N ++ A+ ++ + L G T + V+ ++ L+ + G+ I++S L
Sbjct: 75 NYASVKHALFGADGAVFLPGSLAQTNKPNFQNIQVDGTKNVSELTAKAGIP-LIYMSTLI 133
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
D N Y RTK E+ V +A I R S ++G D F + ++ R
Sbjct: 134 TDENASFSYA-------RTKAISEQIVRNTHSQAVIMRSSVIFGPEDYFFNFLANLSR-- 184
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD 252
F + G + QPVYVGD+A +V A + GK Y GPK L E+L
Sbjct: 185 FMPIMPLFGGGQNKLQPVYVGDIAKFVVYALEKRVILGKNYDLGGPKVLTFENTLEEILK 244
Query: 253 WFH 255
H
Sbjct: 245 VIH 247
>gi|453330508|dbj|GAC87254.1| oxidoreductase [Gluconobacter thailandicus NBRC 3255]
Length = 324
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 15/233 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G G++G KL G + I + N +++ G+V F + D++
Sbjct: 20 AVLGGGGFIGRSFVRKLVATGHVVRIGSQ-NPEEIQGFGKARGTGRVEFLKVSVSDADQL 78
Query: 82 RKAIKYSNVVINLIGREFATKNF-TIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140
+ ++ +NL+ T + + NV+ A ++ GV++++H+SA+ A
Sbjct: 79 DRLFDGADAAVNLV--SVMTPDIRVLHKINVDGAHLAAVRARRAGVKQYVHMSAIGASLT 136
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
P Y R+K E+ V R FP+A + RPS ++G D F + + V L
Sbjct: 137 SPGAY-------GRSKGAAEQVVRRVFPDAGLLRPSVVFGPEDSFFNLFA-LIAAVSPVL 188
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
V+ + T QPV+V DVA A++ +P+ AG+I +A GP + +++ +
Sbjct: 189 PVF--AQHTHYQPVFVEDVAEALLRLL-EPEHAGRIVEAGGPDILSMRDMMAF 238
>gi|448311516|ref|ZP_21501276.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
gi|445604678|gb|ELY58624.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
Length = 306
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 98/236 (41%), Gaps = 32/236 (13%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
V G +G++G+ LC L ++G + R G R GD+ D
Sbjct: 5 VAGGTGFIGTNLCTALHERGHDVTALSRDPSGADLPAGVDRTMGDVSSF----------D 54
Query: 80 EIRKAIKYSNVVINLIGRE------FATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
I A+ + ++N + + T+ E L R ++E GV++ + IS
Sbjct: 55 SIADAVPGHDAIVNFVSLSPLYQPPDGLDHETVHLGGTE---NLVRAAEEHGVDRLLQIS 111
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMW 193
AL AD + YI R K E+ V E TI RPS ++G G +F+ + +
Sbjct: 112 ALGADTDSEIDYI-------RAKGMAERVVRESSLEWTIVRPSVVFGDGAEFVEFTKQVT 164
Query: 194 RHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
L G ET QP++VGD+ + A D G+ Y+ GP+ L++
Sbjct: 165 TPYVTGL---PGGGETQFQPIWVGDLVPMLADAVTDESHVGETYELAGPQIVTLAD 217
>gi|354610269|ref|ZP_09028225.1| NAD-dependent epimerase/dehydratase [Halobacterium sp. DL1]
gi|353195089|gb|EHB60591.1| NAD-dependent epimerase/dehydratase [Halobacterium sp. DL1]
Length = 295
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 27/235 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G++LC +L ++G ++ R + +G V D +
Sbjct: 5 VTGGTGFIGTHLCRELDERGHEVTALSRHPEGAGLPDSVGTAVGDVTAY-------DAVA 57
Query: 83 KAIKYSNVVINLIG-------REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+A++ + V+NL+ ++ ++F + E + R ++E G E + +SAL
Sbjct: 58 EAMEGHDAVVNLVALSPLFKPKQGDERHFDVHLGGTE---NVVRAAEEAGAEYVLQMSAL 114
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADPN PT YI R+K E V E TI RPS ++G G +F+ + +
Sbjct: 115 GADPNGPTAYI-------RSKGAAEGVVRDSDLEHTIVRPSVVFGDGGEFVTFTKKLTTP 167
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
L G ++ QP++V D+ + D G+ Y+ GP+ L+++
Sbjct: 168 YVTGL---PGGGKSQFQPIWVEDIVPMLADCVGDESHWGETYELGGPEVLTLADV 219
>gi|451940072|ref|YP_007460710.1| NADH-ubiquinone oxidoreductase [Bartonella australis Aust/NH1]
gi|451899459|gb|AGF73922.1| NADH-ubiquinone oxidoreductase [Bartonella australis Aust/NH1]
Length = 332
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 15/238 (6%)
Query: 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR--GNFYDVRDLRLCGDLGQVLFQPYH 74
N + TVFG SG++G Y+ L K+G ++ I R N Y + + G++GQ
Sbjct: 10 NPKLITVFGGSGFVGRYVVEALTKRGYRVRIAARRPQNAYYMLQI---GEVGQTQMLKTD 66
Query: 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134
++ + +A+ ++ + L G ++ +A L+ E G+ I+ S+
Sbjct: 67 VKDRASVARALLGADGAVFLPGSLVQANQPNFRTIQIDGVRNVAELAAEAGIS-LIYTSS 125
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L A+ S + TK+ EK + + +A I RPS ++G D+F ++ R
Sbjct: 126 LIANE-------STSFPYAHTKFMSEKIIRDKHSQAIIMRPSVIFGPEDRFFNTLANLSR 178
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
F + G + QPVYVGD+A +V A A GK Y GP+ + L+
Sbjct: 179 --FLPIMPLFGGGQNKLQPVYVGDIAEFVVRALGGRIAPGKSYDLGGPQIMTVQNALE 234
>gi|393218131|gb|EJD03619.1| NAD-binding protein [Fomitiporia mediterranea MF3/22]
Length = 320
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 102/241 (42%), Gaps = 24/241 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-------CGDLGQVLFQPYHP 75
V +G++GSY+ + S +P + L GD + P
Sbjct: 6 VICGAGFLGSYIAKAIAAS-STTKLPRHIQLTSRKPDSLYNKLQPGIGDGKMLSAVPADI 64
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
D ++ A + +NVV++L+G T + + +A+ +K G K IH SA+
Sbjct: 65 TKPDTLKSAFEGANVVVSLVGVLHGTPKM-FEEIQWKGAGNVAQAAKFHGA-KIIHFSAI 122
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD + Y RTK GE V +ATI RPS ++G GD F + +
Sbjct: 123 GADESSHIPY-------ARTKALGENAVREICSDATIIRPSLVFGPGDGFFARFATL--S 173
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-----GKIYQAVGPKRYLLSEL 250
F G T QPVY GD+A A+ A + D A GK+++A GP + E+
Sbjct: 174 TFLPFMPVFGGGTTKFQPVYAGDIARAVEIASRSEDQAMKATSGKVFEAGGPDIFTYKEM 233
Query: 251 L 251
+
Sbjct: 234 M 234
>gi|319403517|emb|CBI77098.1| NADH-ubiquinone oxidoreductase [Bartonella rochalimae ATCC
BAA-1498]
Length = 338
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 105/238 (44%), Gaps = 15/238 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G ++ L K+G ++ I R L++ G++GQ RN +
Sbjct: 21 TVFGGSGFVGRHVVEALTKRGYRVRIAVRCPQKAYYMLQI-GEVGQTQMLKTDVRNYTSV 79
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
A+ ++ + L G T + V+ ++ L+ + G+ I++S L +D N
Sbjct: 80 EHALLGTDGAVFLPGSLAQTNKPNFQNIQVDGAKHVSELTAKAGIP-LIYMSTLISDENA 138
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
Y R K E+ V +A I R S ++G D F + + R F +
Sbjct: 139 SFSYA-------RAKAISEQIVRNTHSQAVIMRSSVIFGPEDCFFNFLANFSR--FMPIM 189
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLDWFH 255
G ++ QPVYVGD+A +V A + GK Y GPK + L E+L H
Sbjct: 190 PLFGGGQSKLQPVYVGDIAKFVVYALEKRVVLGKNYDLGGPKVLTFQNTLEEILKVIH 247
>gi|237755628|ref|ZP_04584242.1| NADH dehydrogenase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692223|gb|EEP61217.1| NADH dehydrogenase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 282
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 33/241 (13%)
Query: 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE 80
++G+ G++G Y+ L + +I+P R N ++++ DL + Y N+++
Sbjct: 3 VIIYGSYGFVGRYIVRNLYNK-VNLILPAR-NIKKIQEV--FKDLSLI---NYVQINEND 55
Query: 81 IRKAI-KYS-NVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
I++ I K++ ++VINLIG T N T + EI L SK +GV+KFI +SAL AD
Sbjct: 56 IQEPIYKFNPDIVINLIGILTETSNQTFEKVHFEITKNLVDASKAVGVKKFIQMSALGAD 115
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF---LRYYGHMWRH 195
N S++ +TK E+ +++ IFRPS + G K R+Y +
Sbjct: 116 VN-------SKSRYLKTKAMAEEYIIKSGLNYVIFRPSIIIGREQKLFEDFRFYSKIT-- 166
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
++ + QPV V DVA A D +I++ G +E++D+
Sbjct: 167 -----PIFMAPYDAKVQPVSVLDVADCFEKATIS-DIKNEIFELCG------NEVIDYVE 214
Query: 256 V 256
+
Sbjct: 215 L 215
>gi|255067873|ref|ZP_05319728.1| putative NADH dehydrogenase 32K chain [Neisseria sicca ATCC 29256]
gi|255047861|gb|EET43325.1| putative NADH dehydrogenase 32K chain [Neisseria sicca ATCC 29256]
Length = 279
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 112/269 (41%), Gaps = 34/269 (12%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+FG SG++GS L +QG Q+ P R F D HP ++ R
Sbjct: 5 IFGGSGFIGSRTAQILKEQGHQVWTPDRRAF----------DF-------LHP-DETAAR 46
Query: 83 KAIKYSNVVINLIGREFATKNFTIADA-NVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+ ++ +V+IN IG +++ I + + P +LA +K ++ ++ +SAL ADP+
Sbjct: 47 RLLEGQDVLINCIG--IMSRHAEILETVHHRTPKQLAAWAKATSIKHWVQLSALGADPSQ 104
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P ++ +K +G+ V + I RPS +YG G + + R L
Sbjct: 105 PINFVG-------SKGRGDDAVAQSGIPIAIARPSVVYGRGGTSCELFIKLAR---LPLL 154
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
+G QPV++ DVA + D I G + L+E L +
Sbjct: 155 PLPEGGRFYLQPVHLADVAEGLAKLAVQTDTDHSIINMTGSQTLTLAEYLTTLRQTLHHK 214
Query: 262 EPDYGYYRYDLRY-DPVMPL-KLFINGLF 288
P + LR DP +PL NG+
Sbjct: 215 PPQH-ILPIPLRLIDPALPLANTLSNGII 242
>gi|421874621|ref|ZP_16306224.1| NAD dependent epimerase/dehydratase family protein [Brevibacillus
laterosporus GI-9]
gi|372456477|emb|CCF15773.1| NAD dependent epimerase/dehydratase family protein [Brevibacillus
laterosporus GI-9]
Length = 303
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 33/247 (13%)
Query: 10 TGGRSSF--NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLG 66
TGG S F +G++A + AS + + L +QGS++ + F L L GD+
Sbjct: 6 TGG-SGFVGHGIIAALLEAS-----HEVHCLLRQGSEL--KMKKLFSKTDHLHLHTGDIF 57
Query: 67 QVLFQPYHPRNDDEIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEM 124
+ D +R A++ + VI+L+G RE + K T + +VE + +++KE+
Sbjct: 58 AI----------DSLRVAMRDCDAVIHLVGIIREQSGKEITFSRIHVEGTRNVLQVAKEL 107
Query: 125 GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDK 184
+ +FI +SAL P +SG +++TKY+ E+ V IFRPS ++G GD+
Sbjct: 108 AIRRFIFMSALGTRPQA----VSG---YHQTKYEAEQLVSASGIPYVIFRPSVIFGPGDE 160
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
F+ + R V G + QPV VA A + A +IY+ GP +
Sbjct: 161 FVTMLADLVR--LPVTPVIGSGTYLL-QPVSRKTVAEVFTQALTNELATNQIYEVGGPHQ 217
Query: 245 YLLSELL 251
++L
Sbjct: 218 LSYMQIL 224
>gi|188997137|ref|YP_001931388.1| NAD-dependent epimerase/dehydratase [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932204|gb|ACD66834.1| NAD-dependent epimerase/dehydratase [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 287
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 27/226 (11%)
Query: 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE 80
++G+ G++G Y+ L + +I+P R N ++++ DL + Y N+D
Sbjct: 3 VIIYGSYGFVGRYIVRNLYNK-VNLILPAR-NIKKIQEV--FKDLSLI---NYVQINEDN 55
Query: 81 IRKAI-KYS-NVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
I++ I K++ ++VINLIG T N T + EI L SK +GV+KFI +SAL AD
Sbjct: 56 IQEPIYKFNPDMVINLIGILTETSNQTFEKVHFEITKSLVDASKAVGVKKFIQMSALGAD 115
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF---LRYYGHMWRH 195
I+ S++ +TK E+ +++ IFRPS + G K R+Y +
Sbjct: 116 -------INSKSRYLKTKTMAEEYIIKSGLNYVIFRPSIIIGREQKLFEDFRFYSKIT-- 166
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241
++ + QPV V DVA A D +I++ G
Sbjct: 167 -----PIFMAPYDAKVQPVSVLDVADCFEKAVIS-DIKNEIFELCG 206
>gi|319406432|emb|CBI80072.1| NADH-ubiquinone oxidoreductase [Bartonella sp. 1-1C]
Length = 338
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 21/243 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR---GNFYDVRDLRLCGDLGQVLFQPYHPR 76
+ TVFG SG++G ++ L K+G ++ I R +Y ++ G++GQ R
Sbjct: 19 LITVFGGSGFVGRHVVEALTKRGYRVRIAVRYPQKAYYMLQ----IGEVGQTQMLKTDVR 74
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
N + A+ ++ + L G T + V+ ++ L+ + G+ I++S L
Sbjct: 75 NYTSVEHALLGTDGAVFLPGSLAQTNKPNFQNIQVDGAKHVSELTAKAGIP-LIYMSTLI 133
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
+D N Y R K E+ V +A I R S ++G D F + + R
Sbjct: 134 SDENASFSYA-------RAKAISEQIVRNTHSQAVIMRSSVIFGPEDCFFNFLANFSR-- 184
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK----RYLLSELLD 252
F + G ++ QPVYVGD+A +V A + GK Y GPK + L E+L
Sbjct: 185 FMPIMPLFGGGQSKLQPVYVGDIAKFVVYALEKRVVLGKNYDLGGPKVLTFQNTLEEILK 244
Query: 253 WFH 255
H
Sbjct: 245 VIH 247
>gi|410943133|ref|ZP_11374874.1| oxidoreductase [Gluconobacter frateurii NBRC 101659]
Length = 324
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 15/233 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G G++G KL G + + + N ++ L G+V F + + +
Sbjct: 20 AVLGGGGFIGRSFVRKLVATGHVVRVGSQ-NPETIQGLGAARGTGRVEFLKVSVNDAERL 78
Query: 82 RKAIKYSNVVINLIGREFATKNFTIAD-ANVEIPARLARLSKEMGVEKFIHISALNADPN 140
+ ++ +NL+ T + + NVE A ++ GV+ ++H+SA+ A
Sbjct: 79 DRLFDGADAAVNLV--SVMTPDVRVLHRINVEGAHLAAVRAQRAGVKSYVHMSAIGASLT 136
Query: 141 PPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
P Y R+K E+ V R FP+A + RPS ++G D F + + V L
Sbjct: 137 SPGAY-------GRSKGAAEQVVRRVFPDAGLLRPSVVFGPEDSFFNLFA-LIAAVSPVL 188
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
V+ + T QPV+V D+A A++ + P+ AG+I +A GP + E++ +
Sbjct: 189 PVF--AQHTRYQPVFVEDIAEALLRLLQ-PEHAGRIVEAGGPDILSMREMMAF 238
>gi|433637961|ref|YP_007283721.1| putative nucleoside-diphosphate sugar epimerase [Halovivax ruber
XH-70]
gi|433289765|gb|AGB15588.1| putative nucleoside-diphosphate sugar epimerase [Halovivax ruber
XH-70]
Length = 307
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 21/236 (8%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G+ LC L ++G + R + G G V + + +
Sbjct: 5 VAGGTGFIGTALCEHLAERGHDVTAMARSPEPSSLPAGVEGVAGDV-------TDPESVE 57
Query: 83 KAIKYSNVVINLIGRE--FATKNFTIADA-NVEIPARLARLSKEMGVEKFIHISALNADP 139
A+ + V NL+ F T + +A ++ L ++ GV++F +S L A P
Sbjct: 58 AAVAGQDAVYNLVALSPLFQTPSGLSHEAIHLGGTENLLAAAESAGVDRFCQLSGLGAAP 117
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ PT ++ R K++ E V E I RPS ++G +FL +
Sbjct: 118 DAPTEHL-------RVKHRAEVAVEAAPLETVIVRPSVVFGENSEFLSFVDATTTAYVTP 170
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
L G QP+++GD+A ++A C D AG+ Y+ GP+R L+++ F+
Sbjct: 171 L---PAGGRMRFQPIWIGDLAP-MLADCVDGPHAGETYELGGPERLTLADVTRLFY 222
>gi|352080452|ref|ZP_08951391.1| NAD-dependent epimerase/dehydratase [Rhodanobacter sp. 2APBS1]
gi|389796968|ref|ZP_10200014.1| putative nucleoside-diphosphate sugar epimerase [Rhodanobacter sp.
116-2]
gi|351683733|gb|EHA66809.1| NAD-dependent epimerase/dehydratase [Rhodanobacter sp. 2APBS1]
gi|388448061|gb|EIM04052.1| putative nucleoside-diphosphate sugar epimerase [Rhodanobacter sp.
116-2]
Length = 312
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 20/233 (8%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
+ G +G++GS L +L G +I++ R N R+L G L V + +DD +
Sbjct: 7 VILGGTGFVGSRLVPRLAADGHRIVLLSR-NREQHREL---GVLPTVSVRNADIHDDDVL 62
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
R+ + ++ VINL+G +VE+ RL GV + +S+L A
Sbjct: 63 RRQLAGADAVINLVGILNPHGRDGFQRVHVELARRLIAACHASGVGRLHQMSSLKAG--- 119
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
G SQ+ +++ + E V + TI++PS ++G GD + + + R++
Sbjct: 120 -----QGLSQYLKSRGEAEALVKASALDWTIYQPSVIFGPGDGLVSRFAKL----LRQMP 170
Query: 202 VYKKGEETIKQ-PVYVGDVAAAIVAACKDPDAAG--KIYQAVGPKRYLLSELL 251
V + P +VGDVA AI A C D G + ++ GP+ L E++
Sbjct: 171 VLPLARAKARMAPTWVGDVAEAI-ARCVDHAKLGQRRSFELYGPEVLTLGEIV 222
>gi|386361635|ref|YP_006059879.1| nucleoside-diphosphate-sugar epimerase [Thermus thermophilus JL-18]
gi|383510662|gb|AFH40093.1| nucleoside-diphosphate-sugar epimerase [Thermus thermophilus JL-18]
Length = 287
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 28/244 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++G + L +G + +++ R + + GD+ + + D E
Sbjct: 5 VVGGTGFVGQEVVRLLLARGHTPLVLARRSRPLPEGAVLVEGDIAREV-------PDLEG 57
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A Y +I G+ F +VE L R + GV + +H+SAL A P
Sbjct: 58 VEAAIYLAGIIRERGQTFRA-------VHVEGVRNLLRAMERAGVGRLLHMSALGARPEA 110
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P S+++RTK +GE V + IFRPS ++G GD+F + G + V L
Sbjct: 111 P-------SRYHRTKAEGEALVRQSGLSHAIFRPSLIFGPGDEF--FGGVLRGLVCTPLP 161
Query: 202 -VYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMK 259
V G+ + +PVYVGDVA V A + IY VGPK Y ELL V+
Sbjct: 162 FVPLIGDGSFPFRPVYVGDVAEVFVGALE--RGLEGIYDLVGPKEYTFRELLQLVMEVLG 219
Query: 260 KGEP 263
+ +P
Sbjct: 220 RRKP 223
>gi|223937357|ref|ZP_03629262.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
gi|223893908|gb|EEF60364.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
Length = 304
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 23/236 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V GASG++G + KL G Q I R + +R + G + + +
Sbjct: 5 VTGASGFVGQEVLEKLHAAGHQSRILAR-HPTSMRTRTQASEFGAEV-HAGDILDVASLA 62
Query: 83 KAIKYSNVVINLIG-----REFATKNFTIADA-NVEIPARLARLSKEMGVEKFIHISALN 136
+ +K + VI+L+G E +N I A NV AR+A GV +F+H+SA+
Sbjct: 63 RGLKGIDAVIHLVGIISELGESTFENIHIRGAENVVDAARIA------GVRRFVHMSAMG 116
Query: 137 ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
N S++++TK+ E+ V + + TIFRPS +YG D F+ + + + +
Sbjct: 117 TRAN-------ASSRYHKTKWAAEEYVRKSGLDYTIFRPSIIYGPKDLFVNLFAKISQ-L 168
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLD 252
+ V G+ + QP+ V DVA V A +P + G+ Y+ G L +++D
Sbjct: 169 SPIMPVMGNGQSKL-QPIPVSDVATCFVKALTEPASLGQTYELGGRDVLTLEQVID 223
>gi|386875947|ref|ZP_10118095.1| NAD-binding protein [Candidatus Nitrosopumilus salaria BD31]
gi|386806237|gb|EIJ65708.1| NAD-binding protein [Candidatus Nitrosopumilus salaria BD31]
Length = 289
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 21/234 (8%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V GA G++ +L N L + +I R +F ++ + ++ + Y +++ +
Sbjct: 8 VVTGARGFIAKHLRNYLSENNIDLISISRNDFKQFKNESM------IVSENY---DENIL 58
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
IK S+ +I+L+G + N NVE+ + L K+ ++K ++ S L N
Sbjct: 59 LPKIKDSDALIHLVGIGNQSVNNDYNMINVELTKHIVNLCKKTKIKKIVYTSGLGVSSNT 118
Query: 142 PT-YYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKL 200
Y+IS KY EK ++ TIFRPS + G D F +Y + ++
Sbjct: 119 SLGYFIS--------KYNAEKIIINSGLNFTIFRPSYIVGKDDHFTKYLKKQIKT--GEI 168
Query: 201 AVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
+ G +I QP+Y+ DV I + P +I VGPK + + F
Sbjct: 169 KIPGSGNYSI-QPIYIDDVIQIISQSAIQPKFKNRIIDLVGPKNITFKQYVKLF 221
>gi|399575971|ref|ZP_10769728.1| hypothetical protein HSB1_17670 [Halogranum salarium B-1]
gi|399238682|gb|EJN59609.1| hypothetical protein HSB1_17670 [Halogranum salarium B-1]
Length = 310
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 118/287 (41%), Gaps = 49/287 (17%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++G+ L +L ++G + + R D DL + + Y D I
Sbjct: 5 VVGGSGFVGTELTRELHRRGHTVSVLSR--HPDEADLPTGVETVEGDVTDY-----DSIV 57
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLAR--------LSKEMGVEKFIHISA 134
A + V NL+ A E+ R+ R ++ GV +F+ +SA
Sbjct: 58 GAFEEKEAVFNLV----ALSPLFEPSGGDEMHDRIHRQGTDHCVKAAEAHGVRRFVQMSA 113
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L ADP+ PT YI R K Q E+ V + T+ RPS ++G G +F+ + +
Sbjct: 114 LGADPDGPTAYI-------RAKGQAEELVTESALDWTLVRPSVVFGDGGEFVSFTKKLTT 166
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWF 254
L G +T QP++VGD+ + D G+ Y+ GP+ L+E+
Sbjct: 167 PYVTGL---PGGGKTRFQPIWVGDLVPLLADVLGDDRHVGETYELGGPEVLTLAEVAKL- 222
Query: 255 HVVMKKGEPDYGYYRYDLRYDPVMP-------LKLFINGLFPGYPMG 294
YR + + V+P + L + G+ P PMG
Sbjct: 223 ------------CYRAEGKSLVVLPVPMVFARIGLTLAGMLPMIPMG 257
>gi|218191757|gb|EEC74184.1| hypothetical protein OsI_09314 [Oryza sativa Indica Group]
Length = 366
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 68/136 (50%), Gaps = 29/136 (21%)
Query: 119 RLSKEMG-VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSD 177
+SKE G +FI +S L A + S+ R K GE+ VL+EFPEATI RP+
Sbjct: 230 EISKEHGGFMRFIQVSCLGAS--------ASSSRMLRAKAAGEESVLKEFPEATIMRPAT 281
Query: 178 MYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKI 236
M G+ D L + W + QPVYV DVAAAIV + KD + GK
Sbjct: 282 MIGTEDWIL----NRWVQI---------------QPVYVVDVAAAIVNSLKDDGTSMGKS 322
Query: 237 YQAVGPKRYLLSELLD 252
Y GP+ Y + +L +
Sbjct: 323 YGLGGPEIYTVHDLAE 338
>gi|395791644|ref|ZP_10471100.1| hypothetical protein MEC_01091 [Bartonella alsatica IBS 382]
gi|395407947|gb|EJF74567.1| hypothetical protein MEC_01091 [Bartonella alsatica IBS 382]
Length = 332
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 15/224 (6%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G ++ L K+G ++ I R L++ G++GQ + ++ +
Sbjct: 15 TVFGGSGFVGRHIVETLTKRGYRVRIAVRCPQKAYYMLQI-GEVGQTQMLKTNIKHRASV 73
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ ++ + L G ++ ++ L+ + GV I++S L A+ N
Sbjct: 74 ARALYGADGAVFLPGSLAQANQSNFQSTQIDGVQNVSELTADAGVP-LIYMSTLVANKNA 132
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHM--WRHVFRK 199
Y R K+ E+ V P+A I RPS ++G+ D F ++ + +F
Sbjct: 133 SFLY-------ARVKFMSEQIVQNTHPQAIIMRPSIIFGAEDCFFNTLANLACFLPIF-- 183
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
++ G+ + QPVYVGD+A V A + +GK Y GP+
Sbjct: 184 -PLFGSGQSKL-QPVYVGDIAEFAVRALEGQVISGKCYDLGGPQ 225
>gi|167585184|ref|ZP_02377572.1| NAD-dependent epimerase/dehydratase [Burkholderia ubonensis Bu]
Length = 219
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 117 LARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV----LREFPEATI 172
LA E GV + +H+SAL A+ + G S + R+K GE + + TI
Sbjct: 1 LASACIEAGVRRLLHMSALGANSH-------GASMYQRSKGDGEAALHAVAATDSLALTI 53
Query: 173 FRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA 232
FRPS ++G GD FL + + R + A+ + QPV+VGDVA A V A
Sbjct: 54 FRPSVVFGPGDAFLNTFARLHRTL---PAIPLAMPDAQFQPVFVGDVARAFVNTLDLAAA 110
Query: 233 AGKIYQAVGPKRYLLSELLDWFHVVMKKGEP 263
GK Y+ GPK Y L L+ + + + P
Sbjct: 111 RGKTYELGGPKVYTLEALVRYCGTLAGREAP 141
>gi|448725610|ref|ZP_21708057.1| NAD-dependent epimerase/dehydratase [Halococcus morrhuae DSM 1307]
gi|445797834|gb|EMA48272.1| NAD-dependent epimerase/dehydratase [Halococcus morrhuae DSM 1307]
Length = 293
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 21/231 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G G++G LC++L ++G + R V + + +G V D +
Sbjct: 5 VTGGDGFVGRSLCDELAERGHDVTALSRDPDPTVFEENVSTVVGDVTAY-------DSMV 57
Query: 83 KAIKYSNVVINLIGRE--FATKNFTIA-DANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ + V+NL+ F + T + ++ R ++E V++F+ +SAL ADP
Sbjct: 58 EQFAGQDAVVNLVALSPLFQPPSGTSHREVHLHGTENAVRAAEEHDVKRFVQMSALGADP 117
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
+ T YI RTK + E V + TIFRPS ++G G +F+ + +
Sbjct: 118 DGETAYI-------RTKGRAEGVVKDSALDWTIFRPSVVFGDGGEFVSFTKKV---TPPY 167
Query: 200 LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
LA +G T QP+++GD+ A ++A D + G+ Y+ GP L+++
Sbjct: 168 LAPLPRGGRTRFQPIWIGDL-APMLADGLDDEHVGETYELGGPAVLTLADV 217
>gi|291278968|ref|YP_003495803.1| NAD-dependent epimerase/dehydratase [Deferribacter desulfuricans
SSM1]
gi|290753670|dbj|BAI80047.1| NAD-dependent epimerase/dehydratase [Deferribacter desulfuricans
SSM1]
Length = 295
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 86 KYSNV--VINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
K +NV V++L+G RE + T + E + +KE V++FIH+SA A
Sbjct: 60 KLNNVDCVVHLVGIIREIPKEGVTFQRYHFEATKMIVDAAKEGDVKRFIHMSANGARSEA 119
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
T Y ++TKY E+ V TIF+PS +YG GD F+ +M +K
Sbjct: 120 ITDY-------HKTKYLAEEYVRNSGLTYTIFKPSVIYGPGDSFI----NMLNDFLKKTP 168
Query: 202 VYK---KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
V+ G ++ QPVYV DVA V A ++ D K + GP+ ELL
Sbjct: 169 VFSYFGDGSYSM-QPVYVADVAKIFVDAIENSDTFNKTFTVCGPEVLSYKELL 220
>gi|448337932|ref|ZP_21526998.1| NAD-dependent epimerase/dehydratase [Natrinema pallidum DSM 3751]
gi|445624270|gb|ELY77657.1| NAD-dependent epimerase/dehydratase [Natrinema pallidum DSM 3751]
Length = 306
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 28/235 (11%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G+ LC +L +G Q+ P G D + + GD+
Sbjct: 5 VAGGTGFIGTNLCAELVDRGHQVTALSRSPADGELPDGVESAI-GDVSAY---------- 53
Query: 79 DEIRKAIKYSNVVINLIGRE--FATKNFTIADA-NVEIPARLARLSKEMGVEKFIHISAL 135
+ I + + V+NL+ + + +A +V L R + GV +F+ +SAL
Sbjct: 54 ESIVDTVVDHDAVVNLVSLSPLYEPRGGPGHEAVHVGGTENLVRAADAGGVSRFLQMSAL 113
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADPN T YI R K + E V E TI RPS ++G G +F+ + +
Sbjct: 114 GADPNGDTAYI-------RAKGRAEAMVRESGLEWTIVRPSVVFGDGGEFVDFTKTLTTP 166
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
L G +T QP++VGD+ + A +D G+ Y GP+ L+++
Sbjct: 167 YVTGL---PGGGKTRFQPIWVGDLVPMLADALEDDAHVGETYDLAGPQITTLADV 218
>gi|448679177|ref|ZP_21690014.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
argentinensis DSM 12282]
gi|445771275|gb|EMA22332.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
argentinensis DSM 12282]
Length = 299
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 111/245 (45%), Gaps = 37/245 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++G +LC +L ++G + P D + + GD+ +
Sbjct: 5 VVGGTGFIGQHLCRELDERGHTVTALSRSPEDATLPDGVE-TVAGDV----------TDY 53
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARL--------ARLSKEMGVEKFI 130
I A + + V L+ A D ++ R+ + ++E GVE+++
Sbjct: 54 GSIEGAFEDQDAVYFLV----ALSPLFKPDGGDKMHERIHLGGTENSVQAAEEHGVERYV 109
Query: 131 HISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYG 190
+SAL ADP+ T+YI R+K + E+ V + TIFRPS ++G G +F+ +
Sbjct: 110 QLSALGADPDGDTHYI-------RSKGRAEQVVTESSLDWTIFRPSVVFGEGGEFVSFTK 162
Query: 191 HMWRHVFRKLAVYK---KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + +Y G +T QP++VGD+ +V + + G+ Y+ GP+ L
Sbjct: 163 RLKGMFAPGVPLYPLPGGGRQTKFQPIWVGDLVPMLVDSIESEAHVGETYEVGGPEVLTL 222
Query: 248 SELLD 252
++ +
Sbjct: 223 RDVTN 227
>gi|158422640|ref|YP_001523932.1| NAD dependent epimerase [Azorhizobium caulinodans ORS 571]
gi|158329529|dbj|BAF87014.1| NAD dependent epimerase [Azorhizobium caulinodans ORS 571]
Length = 328
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 19/236 (8%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYR----GNFYDVRDLRLCGDLGQVLFQPYHP 75
+ TVFG SG++G ++ L ++G ++ + R F L+ G +GQ+ +
Sbjct: 15 LVTVFGGSGFLGRHVVRALARRGYRVRVAVRRPELAGF-----LQPMGYVGQIQVIQANL 69
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R D +R+A++ ++ V+NL+G A A AR + + +H+SA+
Sbjct: 70 RYPDSVRRAVEGADAVVNLVGI-LAPSGRQSFKAVQAAGARAVAEAAAAVGARLVHVSAI 128
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
S S + +TK +GE V P+A I RPS ++G D F + M R
Sbjct: 129 -------GASASSASDYAKTKAEGEAAVRAAVPDAIILRPSIVFGPEDDFFNKFAGMAR- 180
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ G +T QPV+VGDVA A+ A + G Y+ GP+ +LL
Sbjct: 181 -MSPVLPLIGGGQTRFQPVFVGDVAEAVERAVEGLAKPGATYELGGPEVRTFEQLL 235
>gi|385804619|ref|YP_005841019.1| NADH-binding domain-containing protein [Haloquadratum walsbyi C23]
gi|339730111|emb|CCC41429.1| arNOG06768 family NADH-binding domain protein [Haloquadratum
walsbyi C23]
Length = 307
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 41/284 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++G+ LC +L +G + R + +G V D +
Sbjct: 5 VIGGSGFIGTRLCAELSNRGHNVTAVSRSPDNSELPADVDTKMGDVTAY-------DSLS 57
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPAR-----LARLSKEMGVEKFIHISALNA 137
+ + V NL+ K + D ++ R + R ++ GV I ISAL A
Sbjct: 58 GSFADIDAVYNLVALSPLFKP-SGGDKMHDVIHRRGTENVVRAAEANGVSHLIQISALGA 116
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DP+ T YI + + + ++ E TIFRPS ++G G +F+ + +
Sbjct: 117 DPDGSTAYIQAKGRAETAVTESDTDL-----EFTIFRPSVVFGDGGEFVSFTKLLAPPYV 171
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
L G +T QP++V D+ + A G+IY+ GP+R L+E+ H
Sbjct: 172 SAL---PGGGKTRFQPIWVNDLVPMLADAIDADTHHGEIYEIGGPERLTLAEIAKTIHTA 228
Query: 258 MKKGEPDYGYYRYDLRYDPVMP-------LKLFINGLFPGYPMG 294
D R ++P + L + + PG+P+G
Sbjct: 229 -------------DGRSTTIVPVPMSLAKIGLTVGDVIPGFPIG 259
>gi|393796151|ref|ZP_10379515.1| NAD-dependent epimerase/dehydratase [Candidatus Nitrosoarchaeum
limnia BG20]
Length = 283
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 24/243 (9%)
Query: 13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP 72
+++FN + G++GY+ +L + ++ R NF + L + + P
Sbjct: 2 KNNFNIAIT---GSNGYVARHLRKFFSSKKIAVLAISRTNFQKYK-------LEKKVITP 51
Query: 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
+ D I +K N++I+LI T N D+ VE ++ L K ++K I+I
Sbjct: 52 KFSKLD--ILPELKKCNILIHLISTTTQTVNKNHFDSTVESTKKIIELCKICNIKKIIYI 109
Query: 133 SALNADPNPPT-YYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGH 191
S L A N + Y+IS KY E+E++ TIFRPSD+ G D + +
Sbjct: 110 SGLGASKNTTSGYFIS--------KYLAEQEIIHSGICYTIFRPSDILGYDDYLSK---N 158
Query: 192 MWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
+ + + + + + QP++V DV+ I A KI VGP+ + +
Sbjct: 159 LKKQIKSDKIIIPGSGKYVFQPIFVDDVSKIIFDALSKKKYNNKIISLVGPETITFEKYV 218
Query: 252 DWF 254
F
Sbjct: 219 TLF 221
>gi|218679775|ref|ZP_03527672.1| putative NADH-ubiquinone oxidoreductase subunit [Rhizobium etli
CIAT 894]
Length = 217
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
R I +A+ ++ V+N +G T T DA E AR + HISA+
Sbjct: 6 RYRSSIDRAVDGASHVVNCVGILHETGRNTF-DAVQEFGARAVAEAARNAGATLTHISAI 64
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
AD S + RTK + E + +A IFRPS ++G D F + M R
Sbjct: 65 GADAK-------SASDYGRTKGRAEAAIHSIKSDAVIFRPSIVFGPEDSFFNKFADMAR- 116
Query: 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFH 255
+ G +T QPVYV DVA A+ A A GK+Y+ GP+ E L+
Sbjct: 117 -MSPILPLVGGGKTKFQPVYVEDVAEAVARAVDGKVAGGKVYELGGPEVLSFRECLEAML 175
Query: 256 VVMKKGEP 263
V + P
Sbjct: 176 KVTSRKNP 183
>gi|350562558|ref|ZP_08931391.1| short-chain dehydrogenase/reductase SDR [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349778897|gb|EGZ33246.1| short-chain dehydrogenase/reductase SDR [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 368
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 120 LSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMY 179
++ E GV + + IS + A P+ P+ Y+ R + +G+ V FP A I RPS ++
Sbjct: 1 MAHETGVRQLVLISGIGASPSSPSPYV-------RARARGKDRVRAAFPHAVIVRPSVLF 53
Query: 180 GSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239
G GD FL + + ++ +G +T QPV V DVA A+ + D+ +++
Sbjct: 54 GPGDAFLTNLTRLAS--LPVIPLFGRG-DTRLQPVLVDDVAEAVTKRLESTDSESLLFEL 110
Query: 240 VGPKRYLLSELLDWFHVV 257
GP+ Y EL++ +V
Sbjct: 111 GGPRVYRYRELVEQVAIV 128
>gi|384432409|ref|YP_005641768.1| NAD-dependent epimerase/dehydratase [Thermus thermophilus
SG0.5JP17-16]
gi|333967877|gb|AEG34641.1| NAD-dependent epimerase/dehydratase [Thermus thermophilus
SG0.5JP17-16]
Length = 287
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 117 LARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPS 176
L R + GV + +H+SAL A P P S+++RTK +GE V + IFRPS
Sbjct: 86 LLRAMERAGVGRLLHMSALGARPEAP-------SRYHRTKAEGEALVRQSGLSHAIFRPS 138
Query: 177 DMYGSGDKFLRYYGHMWRHVFRKLA-VYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAG 234
++G GD+F + G + V L V G+ + +PVYVGDVA A V A +
Sbjct: 139 LIFGPGDEF--FGGVLRGLVCTPLPFVPLIGDGSFPFRPVYVGDVAEAFVGALE--RGLE 194
Query: 235 KIYQAVGPKRYLLSELLDWFHVVMKKGEP 263
Y VGPK Y ELL V+ + +P
Sbjct: 195 GTYDLVGPKEYTFRELLQLVMEVLGRRKP 223
>gi|381190063|ref|ZP_09897587.1| NADH-ubiquinone oxidoreductase 39 kDa subunit related protein
[Thermus sp. RL]
gi|380452093|gb|EIA39693.1| NADH-ubiquinone oxidoreductase 39 kDa subunit related protein
[Thermus sp. RL]
Length = 287
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 111/245 (45%), Gaps = 30/245 (12%)
Query: 23 VFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++G + L +G + +++ R + + GD+ + + D E
Sbjct: 5 VVGGTGFVGQEVVRLLLARGHTPLVLARRSRPLPEGAVLVEGDIAREV-------PDLEG 57
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A Y +I G+ F +V+ L R + GV + +H+SAL A P
Sbjct: 58 AEAAIYLAGIIRERGQTFRA-------VHVDGVRNLLRAMERAGVGRLLHMSALGARPEA 110
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
P S+++RTK +GE V + IFRPS ++G GD+F +G + R +
Sbjct: 111 P-------SRYHRTKAEGEALVRQSGXXHAIFRPSLIFGPGDEF---FGGVLRGLVCAPL 160
Query: 202 VYKK--GEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
+ G+ + +PVYVGDVA A V A + Y VGPK Y ELL V+
Sbjct: 161 PFVPLIGDGSFPFRPVYVGDVAEAFVGALE--RGLEGTYDLVGPKEYTFRELLQLVMEVL 218
Query: 259 KKGEP 263
+ +P
Sbjct: 219 GRRKP 223
>gi|290980221|ref|XP_002672831.1| predicted protein [Naegleria gruberi]
gi|284086410|gb|EFC40087.1| predicted protein [Naegleria gruberi]
Length = 347
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 15/237 (6%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
T+FG +G++G + ++ Q ++I+ RGN + GD V++ + D
Sbjct: 40 TVTIFGGNGFLGQEVVKRIAPQCDRVIVACRGNNEFEPVAKRIGDNITVVYSDVTDK--D 97
Query: 80 EIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
+ +AI S+VVINL G + + N T + ++ P+ ++ + G ++ I+++ LN++
Sbjct: 98 SVDRAIYGSDVVINLTGILYESDN-TFVEIYIDGPSNISHSAHTNGADQMINVTFLNSEL 156
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR--YYGHMWRHVF 197
+ P+++ T ++ E V FP +T +PS M+ + Y + R
Sbjct: 157 DSPSWW-------SDTNFRSEDIVYGNFPNSTNVKPSIMFDRKGNYSSGAYINRIRRTPL 209
Query: 198 RKLAVYKKGEETIK-QPVYVGDVAAAIVAA--CKDPDAAGKIYQAVGPKRYLLSELL 251
+ V K QPV+V DV A+ K + GK GP+ +++
Sbjct: 210 KFFPVIPTPFSGAKLQPVFVEDVVEALEKTIFSKVEETKGKNLYLAGPEVMTFGQII 266
>gi|110669031|ref|YP_658842.1| NADH dehydrogenase 32K chain [Haloquadratum walsbyi DSM 16790]
gi|109626778|emb|CAJ53246.1| arNOG06768 family NADH-binding domain protein [Haloquadratum
walsbyi DSM 16790]
Length = 307
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 115/284 (40%), Gaps = 41/284 (14%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G SG++G+ LC +L + + R D +L D Y D +
Sbjct: 5 VIGGSGFIGTRLCAELSNRDHNVTAVSRSP--DNSELPADVDTKMGDVTAY-----DSLS 57
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPAR-----LARLSKEMGVEKFIHISALNA 137
+ + V NL+ K + D ++ R + R ++ GV I ISAL A
Sbjct: 58 GSFADIDAVYNLVALSPLFKP-SGGDKMHDVIHRRGTENVVRAAEANGVSHLIQISALGA 116
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVF 197
DP+ T YI + + + ++ E TIFRPS ++G G +F+ + +
Sbjct: 117 DPDGSTAYIQAKGRAETAVTESDTDL-----EFTIFRPSVVFGDGGEFVSFTKLLAPPYV 171
Query: 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
L G +T QP++V D+ + A G+IY+ GP+R L+E+ H
Sbjct: 172 SAL---PGGGKTRFQPIWVNDLVPMLADAIDADTHHGEIYEIGGPERLTLAEIAKTIHTA 228
Query: 258 MKKGEPDYGYYRYDLRYDPVMPLK-------LFINGLFPGYPMG 294
D R ++P+ L + + PG+PMG
Sbjct: 229 -------------DGRSTTIVPIPMSLAKIGLTVGDVIPGFPMG 259
>gi|46255125|ref|YP_006037.1| NADH-ubiquinone oxidoreductase 39 kDa subunit/NADH dehydrogenase
[Thermus thermophilus HB27]
gi|46197974|gb|AAS82384.1| NADH-ubiquinone oxidoreductase 39 kDa subunit/NADH dehydrogenase
[Thermus thermophilus HB27]
Length = 287
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 32/246 (13%)
Query: 23 VFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++G + L +G + +++ R + + GD+ + + D E
Sbjct: 5 VVGGTGFVGREVVRLLLARGHTPLVLARRSRPLPEGAVLVEGDIAREV-------PDLEG 57
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A Y +I G+ F +VE L R + GV + +H+SAL A P
Sbjct: 58 AEAAIYLAGIIRERGQTFRA-------VHVEGVRNLLRAMERAGVGRLLHMSALGARPEA 110
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK-- 199
P S+++RTK +GE V + IFRPS ++G GD+F +G + R +
Sbjct: 111 P-------SRYHRTKAEGEALVRQSGLSHAIFRPSLIFGPGDEF---FGRVLRGLVCAPL 160
Query: 200 --LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
+ + G + PVYVGDVA A V A + Y VGPK Y ELL V
Sbjct: 161 PFVPLIGDGGFPFR-PVYVGDVAEAFVGALE--RGLEGTYDLVGPKEYSFRELLQLVMEV 217
Query: 258 MKKGEP 263
+ + +P
Sbjct: 218 LGRRKP 223
>gi|389794271|ref|ZP_10197429.1| putative nucleoside-diphosphate sugar epimerase [Rhodanobacter
fulvus Jip2]
gi|388432796|gb|EIL89785.1| putative nucleoside-diphosphate sugar epimerase [Rhodanobacter
fulvus Jip2]
Length = 312
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 24/273 (8%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++G +L +L G ++++ R N R+L G L V + + +
Sbjct: 7 VVLGGTGFVGRHLVPRLAADGHRVVVLSR-NREQHREL---GVLPGVQVRSADAHDPAVL 62
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
++ + ++ VINL+G + +VE+ ++ + GV + +SAL A
Sbjct: 63 QRELAGADAVINLVGILNPRGIHSFEHVHVELVEKVIEACRANGVTRLHQMSALKAG--- 119
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
G S + +++ Q E V + + T+++PS M+G GD + + + R + A
Sbjct: 120 -----QGLSNYLKSRGQMEARVRQSGLDWTLYQPSVMFGEGDGLVSRFAGLLRQLP---A 171
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG--KIYQAVGPKRYLLSELLDWFHVVMK 259
+ ++ P +VGDVA AI A C D A G + ++ GP + L E++
Sbjct: 172 LPLARAKSRLAPTWVGDVATAI-ARCVDNPALGRQRCFELYGPDVFSLGEIVRLIRDASG 230
Query: 260 KGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYP 292
+ P D + L+ + L PG P
Sbjct: 231 RRTPILAL------PDSLGRLQAQLAELLPGKP 257
>gi|448406471|ref|ZP_21572931.1| NAD-dependent epimerase/dehydratase [Halosimplex carlsbadense
2-9-1]
gi|445677838|gb|ELZ30336.1| NAD-dependent epimerase/dehydratase [Halosimplex carlsbadense
2-9-1]
Length = 285
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 119 RLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178
R ++E GVE+F+ +SAL AD + PT+Y+ R K + E V IFRPS +
Sbjct: 83 RAAEEHGVERFVQMSALGADADGPTHYL-------RAKGRAEDLVRDSDSGWVIFRPSII 135
Query: 179 YGSGDKFLRYYGHMWRHVFRKLAVYK---KGEETIKQPVYVGDVAAAIVAACKDPDAAGK 235
+G G +F+ + + + VY G++T QP++VG+ I A +D + G+
Sbjct: 136 FGEGGEFVTFTKKLKSWFAPGVPVYPLPGGGKQTRFQPIWVGEFVPMIADAVEDDEHVGE 195
Query: 236 IYQAVGPKRYLLSELLD 252
Y+ GP L E+ +
Sbjct: 196 TYEVGGPDVLTLREVTE 212
>gi|251772378|gb|EES52945.1| NAD-dependent epimerase/dehydratase [Leptospirillum
ferrodiazotrophum]
Length = 299
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 36/245 (14%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQII----------IPYRGNFYDVRDLRLCGDLGQVL 69
+ V G +G++G YL + L G + +P FY + + G
Sbjct: 8 IHAVIGGTGFVGRYLADALRNTGKARVRLLARKHPDSLPPETEFYPIDAVSGMG------ 61
Query: 70 FQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129
+++ + +NVV L G T+ + + + + + +
Sbjct: 62 -----------MKEGLSRANVVWYLPGILAETREQSYEMVHHQGVVNTLSAVDQRSLRRI 110
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
+HISA+ PN P+ Y +RTK +GE+ + TI RPS ++G GD+ + +
Sbjct: 111 VHISAVGTAPNAPSAY-------HRTKARGEEALRNSLLPYTIVRPSLVFGKGDRSINQF 163
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSE 249
+ R V L + G + QP++ GD+A V + + GKIY+A GP+ Y +
Sbjct: 164 LDIARLV-HVLPMIGPGTARV-QPIFAGDLARLCVMIAERAETLGKIYEAGGPRIYTYRQ 221
Query: 250 LLDWF 254
+++
Sbjct: 222 MMETL 226
>gi|384439414|ref|YP_005654138.1| NADH-ubiquinone oxidoreductase 39 kDa subunit/NADH dehydrogenase
[Thermus sp. CCB_US3_UF1]
gi|359290547|gb|AEV16064.1| NADH-ubiquinone oxidoreductase 39 kDa subunit/NADH dehydrogenase
[Thermus sp. CCB_US3_UF1]
Length = 287
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 112/246 (45%), Gaps = 32/246 (13%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V G +G++G +L +L + G ++ R RDL G V R ++R
Sbjct: 5 VVGGTGFVGRHLVRRLLQGGHTPLVLARSP----RDL----PPGAVFLPGDITREAPDLR 56
Query: 83 ---KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139
AI + ++ RE + T +VE L + GV++ +H+SAL A
Sbjct: 57 GVEAAIYLAGII-----RE---RGQTFQQVHVEGVRNLLMGMRRAGVDRLLHMSALGARR 108
Query: 140 NPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK 199
GS++Y TK QGE+ V TIFRPS ++G GD+F + G + V +
Sbjct: 109 G-------TGSRYYETKAQGEELVRESGVSWTIFRPSLIFGPGDEF--FGGVLRGLVCQP 159
Query: 200 LA-VYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
L V G+ + +PVYVGDVA A A + + VGP+ Y ELL+ V
Sbjct: 160 LPFVPLIGDGSFPFRPVYVGDVAEAFAGALE--RGVMGTWDLVGPREYTFRELLERTMEV 217
Query: 258 MKKGEP 263
+ + +P
Sbjct: 218 LGRRKP 223
>gi|386857545|ref|YP_006261722.1| NAD-dependent epimerase/dehydratase [Deinococcus gobiensis I-0]
gi|380001074|gb|AFD26264.1| NAD-dependent epimerase/dehydratase [Deinococcus gobiensis I-0]
Length = 289
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 32/273 (11%)
Query: 25 GASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA 84
GASG++G + +L +QG + R R + G G L + +A
Sbjct: 3 GASGFVGRAVVAELLRQGHTVFAGSR------RGEAVGGAQGVKL----DVTDAASALRA 52
Query: 85 IKYS--NVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
++ + + V++L+G TK+ T A+VE + L+ +++H+SAL ADP
Sbjct: 53 VQQAEPDAVVHLVGIIAQTKDQTFQAAHVEGTRHM--LAATPRGARYLHMSALGADP--- 107
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
+ S++ TK + E V + TIFRPS ++G GD F +G + + + +
Sbjct: 108 ----ASKSRYSATKGEAEALVRSSGLDWTIFRPSLIFGQGDDF---FGRVLKELVTTAPI 160
Query: 203 YKK-GEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260
+ G+ +PV + DVA A A P G+ Y GP+ + +LLD + +
Sbjct: 161 VPQIGDGRFPFRPVSISDVAQAFAGALTRPGTIGQTYALTGPEEFTFRQLLDEEQRALGQ 220
Query: 261 GEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPM 293
+P P+M L + + G P P+
Sbjct: 221 HKPVVPVPL------PLMDLAVPLMGALPKPPI 247
>gi|55978281|ref|YP_145337.1| NADH-ubiquinone oxidoreductase 39 kDa subunit related protein
[Thermus thermophilus HB8]
gi|55773454|dbj|BAD71894.1| NADH-ubiquinone oxidoreductase 39 kDa subunit related protein
[Thermus thermophilus HB8]
Length = 287
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 32/246 (13%)
Query: 23 VFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
V G +G++G + L +G + +++ R + + GD+ + + D E
Sbjct: 5 VVGGTGFVGQEVVRLLLARGHTPLVLARRSRPLPEGAVLVEGDIAREV-------PDLEG 57
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A Y +I G+ F +VE L R + GV + +H+SAL A P
Sbjct: 58 VEAAIYLAGIIRERGQTFRA-------VHVEGVRNLLRAMERAGVGRLLHMSALGARPEA 110
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRK-- 199
P S+++RTK +GE V + IFRPS ++G GD+F +G + R +
Sbjct: 111 P-------SRYHRTKAEGEALVRQSGLSHAIFRPSLIFGPGDEF---FGRVLRGLVCAPL 160
Query: 200 --LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVV 257
+ + G + PVYVGDVA A V A + Y VGPK Y ELL V
Sbjct: 161 PFVPLIGDGGFPFR-PVYVGDVAEAFVGALE--RGLEGTYDLVGPKEYSFRELLQLVMEV 217
Query: 258 MKKGEP 263
+ + +P
Sbjct: 218 LGRRKP 223
>gi|118578929|ref|YP_900179.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM
2379]
gi|118501639|gb|ABK98121.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM
2379]
Length = 298
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 11/182 (6%)
Query: 84 AIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
A + VINL+G REF ++ T +V+ A + +K G+ +++ +SAL +
Sbjct: 57 AAQGCQAVINLVGIIREFPSRGITFQRLHVQATANMLAAAKAAGIGRYLQMSALGTRKD- 115
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
++++R+K++ E+ V E TI RPS +YG GD F+ RH +
Sbjct: 116 ------ARAEYHRSKFRAEELVRASGLEWTILRPSLIYGPGDSFINMLAGQLRHA-PVMP 168
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261
V G + QP++ DVA + + + Y G R ELLD M K
Sbjct: 169 VMGNGRYRL-QPIHADDVARCFALSLELGETIAHCYDLCGANRLSYLELLDAIADAMGKP 227
Query: 262 EP 263
P
Sbjct: 228 AP 229
>gi|146337299|ref|YP_001202347.1| NAD dependent epimerase/dehydratase [Bradyrhizobium sp. ORS 278]
gi|146190105|emb|CAL74097.1| Conserved hypothetical protein; putative NAD dependent
epimerase/dehydratase family protein [Bradyrhizobium sp.
ORS 278]
Length = 322
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 105/235 (44%), Gaps = 17/235 (7%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD 79
+ TVFG SG++G + L K+ +I + R L+ G +GQ+ + R D
Sbjct: 8 LVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPEL-AGHLQPLGRVGQIHTVQANLRYPD 66
Query: 80 EIRKAIKYSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137
+ A++ S+V INL+G E + F DA A + + + +SA+ A
Sbjct: 67 SVAAALRDSHVAINLVGILTESGAQTF---DAVQAEGAATVAKAAAAAGARMVQVSAIGA 123
Query: 138 DPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHV- 196
D S + R K GE VL PEA I RPS ++G D+F + + R
Sbjct: 124 DAE-------SASAYARAKAAGEAAVLAAVPEAVIMRPSVVFGPEDQFTNRFAGLARIAP 176
Query: 197 FRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251
F L G ET QPVYVGDVA A+ A G Y+ GP+ E+L
Sbjct: 177 FLPLV---GGGETKMQPVYVGDVATAVADAVDGKAQPGATYELGGPEVLSFREIL 228
>gi|389847698|ref|YP_006349937.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax
mediterranei ATCC 33500]
gi|448617675|ref|ZP_21666135.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax
mediterranei ATCC 33500]
gi|388245004|gb|AFK19950.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax
mediterranei ATCC 33500]
gi|445748043|gb|ELZ99493.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax
mediterranei ATCC 33500]
Length = 301
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 124/288 (43%), Gaps = 46/288 (15%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRG-NFYDVRD--LRLCGDLGQVLFQPYHPRNDD 79
V G +G++GS+LC +L +G + R + D+ D GD+ Y+ D+
Sbjct: 5 VVGGTGFIGSHLCRELHSRGHDVTAMSRSPSGADLPDGVETATGDV-----TDYNSMTDE 59
Query: 80 EIRKAIKYSNVVINLIGRE--FATK--NFTIADANVEIPARLARLSKEMGVEKFIHISAL 135
+ + V+NL+ F K N + + + + ++ V + + +SAL
Sbjct: 60 -----FEGQDAVVNLVALSPLFEPKGGNRMHDIVHWQGTENVVKAAESHDVPRVVQMSAL 114
Query: 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRH 195
ADP T YI R+K + E+ V + IFRPS ++G G +F+ + +
Sbjct: 115 GADPEGDTAYI-------RSKGKAERAVKSSGLDWVIFRPSVVFGDGGEFVSFTKRLKGM 167
Query: 196 VFRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDW 253
+ +Y +T QP++VGD+A + A + + G+ Y GP+ L E+ +
Sbjct: 168 FAPGVPLYPLPGNGKTRFQPIWVGDLAPMLAGAVEGDEHVGETYTIGGPENLTLREITEM 227
Query: 254 FHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGL-------FPGYPMG 294
Y + + ++PL + + G+ PG+PMG
Sbjct: 228 V-------------YDAEGKSITIVPLPMALAGIGLTVLGAVPGFPMG 262
>gi|258515822|ref|YP_003192044.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans
DSM 771]
gi|257779527|gb|ACV63421.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans
DSM 771]
Length = 308
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 38/246 (15%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIII----PYRGNFYDVRDLRLCGDLGQVLFQ 71
+N + V GA GY G Y+ +L QG ++ P R N + V
Sbjct: 2 YNTELYAVTGAFGYTGKYITRRLLSQGKRVKTLTGHPNRHNPFG----------NHVSIA 51
Query: 72 PYHPRNDDEIRKAIKYSNVVINLIGREFA--TKNFTIADANVEIPARLARLSKEMGVEKF 129
P++ N D++ K+++ + V+IN F+ + A AN +I L + +++ G+ +
Sbjct: 52 PFNFENPDKLIKSLQGATVLINTYWVRFSYGLVTYDKAVANTKI---LVKAAEKAGIRRI 108
Query: 130 IHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYY 189
+HIS NA + Y G EK ++ I RP+ ++G+ D +
Sbjct: 109 VHISISNASEDSSLPYFKGKGLL-------EKVIINSNLSYAIIRPTVIFGNEDILINNI 161
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGK----IYQAVGPKRY 245
M R F A+ G+ I QPV+V D+ IV +AAGK I AVGP+ +
Sbjct: 162 AWMLRR-FPLFAIPGPGDYKI-QPVFVEDMVDLIV------NAAGKEENIITDAVGPETF 213
Query: 246 LLSELL 251
+EL+
Sbjct: 214 TFNELV 219
>gi|403529962|ref|YP_006664491.1| NADH-ubiquinone oxidoreductase [Bartonella quintana RM-11]
gi|403232034|gb|AFR25777.1| NADH-ubiquinone oxidoreductase [Bartonella quintana RM-11]
Length = 332
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 11/222 (4%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEI 81
TVFG SG++G ++ L K+G ++ I R L++ G++GQ ++ +
Sbjct: 15 TVFGGSGFVGRHVVETLTKRGYRVRIAVRSPQKAYYMLQI-GEVGQTQMLKTDIKHRASV 73
Query: 82 RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP 141
+A+ ++ + L G +E ++ L+ E + I++S L A+ N
Sbjct: 74 ARALLGAHGAVFLPGSLTQASQSDFQKTQIEGTQNVSELTAEADI-PLIYMSTLVANQNA 132
Query: 142 PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
Y R K EK V + P+A I RPS ++G D F ++ F +
Sbjct: 133 SFLY-------ARVKSMSEKIVHNKHPQAIIMRPSVIFGPEDCFFNTLANL--SCFLPII 183
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
G + QPVYV D+A +V A ++ GK Y GP+
Sbjct: 184 PLFGGGQNKLQPVYVSDIAEFVVRALEEQIVWGKSYDLGGPQ 225
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.142 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,319,714,368
Number of Sequences: 23463169
Number of extensions: 233368822
Number of successful extensions: 491820
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 1677
Number of HSP's that attempted gapping in prelim test: 487455
Number of HSP's gapped (non-prelim): 2607
length of query: 303
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 162
effective length of database: 9,050,888,538
effective search space: 1466243943156
effective search space used: 1466243943156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)