BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4233
(303 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P34943|NDUA9_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Bos taurus GN=NDUFA9 PE=1 SV=1
Length = 380
Score = 250 bits (639), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 124/256 (48%), Positives = 176/256 (68%), Gaps = 11/256 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+I+P+R YD LR GDL
Sbjct: 41 IPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ++F ++ R+ D IR+A+++S+VVINL+GRE+ T+NF D V+IP +A++SKE G
Sbjct: 101 GQIIFMDWNGRDKDSIRRAVEHSSVVINLVGREWETQNFDFEDVFVKIPQAIAQVSKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VEKFIHIS LNAD I S++ R+K GEKEV FPEATI +P++++G D+F
Sbjct: 161 VEKFIHISHLNAD-------IKSSSKYLRSKAVGEKEVRETFPEATIIKPAEIFGREDRF 213
Query: 186 LRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L Y+ ++ W F + + G++T+KQPVY+ DV I+ A KDPDA GK + VGP R
Sbjct: 214 LNYFANIRW---FGGVPLISLGKKTVKQPVYIVDVTKGIINAIKDPDARGKTFAFVGPSR 270
Query: 245 YLLSELLDWFHVVMKK 260
YLL +L+ + V +
Sbjct: 271 YLLFDLVQYVFAVAHR 286
>sp|Q0MQB3|NDUA9_GORGO NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Gorilla gorilla gorilla GN=NDUFA9 PE=2
SV=2
Length = 377
Score = 249 bits (637), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/252 (51%), Positives = 169/252 (67%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKNF D V+IP +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 274
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 275 HLVKYIFAVAHR 286
>sp|Q16795|NDUA9_HUMAN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Homo sapiens GN=NDUFA9 PE=1 SV=2
Length = 377
Score = 249 bits (636), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/252 (51%), Positives = 169/252 (67%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKNF D V+IP +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 274
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 275 HLVKYIFAVAHR 286
>sp|P0CB82|NDUA9_PONPY NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Pongo pygmaeus GN=NDUFA9 PE=2 SV=1
Length = 377
Score = 248 bits (633), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 168/252 (66%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ T+NF D V+IP +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETRNFDFEDVFVKIPQAIAQLSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FASM--HRFGPTPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPNRYLLF 274
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 275 HLVKYIFAVAHR 286
>sp|P0CB81|NDUA9_PONAB NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Pongo abelii GN=NDUFA9 PE=2 SV=1
Length = 377
Score = 248 bits (633), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 168/252 (66%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ T+NF D V+IP +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETRNFDFEDVFVKIPQAIAQLSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FASM--HRFGPTPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPNRYLLF 274
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 275 HLVKYIFAVAHR 286
>sp|Q0MQB4|NDUA9_PANTR NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Pan troglodytes GN=NDUFA9 PE=2 SV=1
Length = 377
Score = 248 bits (632), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 169/252 (67%), Gaps = 9/252 (3%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +G+VATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LR GDLGQ+
Sbjct: 44 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
LF + R+ D IR+ +++SNVVINLIGR++ TKN+ D V+IP +A+LSKE GVEK
Sbjct: 104 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNYDFEDVFVKIPQAIAQLSKEAGVEK 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA+ I S++ R K GEK V FPEA I +PSD++G D+FL
Sbjct: 164 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNS 216
Query: 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+ M H F + + G +T+KQPVYV DV+ IV A KDPDA GK + VGP RYLL
Sbjct: 217 FASM--HRFGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLF 274
Query: 249 ELLDWFHVVMKK 260
L+ + V +
Sbjct: 275 HLVKYIFAVAHR 286
>sp|Q5BK63|NDUA9_RAT NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Rattus norvegicus GN=Ndufa9 PE=1 SV=2
Length = 377
Score = 246 bits (628), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/246 (50%), Positives = 165/246 (67%), Gaps = 11/246 (4%)
Query: 9 GTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQV 68
G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD LRL GDLGQ+
Sbjct: 44 GKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDIYDTMHLRLMGDLGQL 103
Query: 69 LFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEK 128
+F + R+ D IRKA+++SNVVINLIGRE+ T+NF D V IP +A+ SKE GVE+
Sbjct: 104 IFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAGVER 163
Query: 129 FIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
FIH+S LNA + ++ R+K GEKEV FP+A I RPSDM+G D+FL +
Sbjct: 164 FIHVSHLNAS-------MKSSAKSLRSKAVGEKEVRTVFPDAIIIRPSDMFGREDRFLNH 216
Query: 189 YG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ + W F + + G +T+KQPVYV DV+ I A K+PDA GK + GP RYLL
Sbjct: 217 FANYRW---FLAVPLVSLGFKTVKQPVYVADVSKGIANATKNPDAIGKTFAFTGPNRYLL 273
Query: 248 SELLDW 253
L+ +
Sbjct: 274 FHLVKY 279
>sp|Q9DC69|NDUA9_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Mus musculus GN=Ndufa9 PE=1 SV=2
Length = 377
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/249 (51%), Positives = 167/249 (67%), Gaps = 11/249 (4%)
Query: 6 LKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL 65
+ G GGRSS +GVVATVFGA+G++G Y+ N LG+ GSQ+IIPYR + YD+ LRL GDL
Sbjct: 41 IPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDVYDIMHLRLMGDL 100
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
GQ+ F + R+ D IRKA+++SNVVINLIGRE+ T+NF D V IP +A+ SKE G
Sbjct: 101 GQLTFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAG 160
Query: 126 VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKF 185
VE+FIH+S LNA + S+ R+K GEKEV FPEA I RPSD++G D+F
Sbjct: 161 VERFIHVSHLNA-------SMKSSSKSLRSKAVGEKEVRSVFPEAIIIRPSDIFGREDRF 213
Query: 186 LRYYG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKR 244
L ++ + W F + + G +T+KQPVYV DV+ IV A KDPDA GK + GP R
Sbjct: 214 LNHFANYRW---FLAVPLVSLGFKTVKQPVYVADVSKGIVNATKDPDAVGKTFAFTGPNR 270
Query: 245 YLLSELLDW 253
YLL L+ +
Sbjct: 271 YLLFHLVKY 279
>sp|Q9SK66|NDUA9_ARATH NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Arabidopsis thaliana GN=At2g20360 PE=2
SV=2
Length = 402
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 162/261 (62%), Gaps = 16/261 (6%)
Query: 5 HL-KKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG 63
HL +KGTGGRSS +G+VATVFGA+G++G YL +L K GSQ+++P+RG+ R L+L G
Sbjct: 54 HLARKGTGGRSSVSGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMG 113
Query: 64 DLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKE 123
DLGQV+ + PR++D I+ + +NVVINLIGRE+ T+NF+ DAN I +LA ++KE
Sbjct: 114 DLGQVVPMKFDPRDEDSIKAVMAKANVVINLIGREYETRNFSFEDANHHIAEKLALVAKE 173
Query: 124 M-GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSG 182
G+ ++I +S L A +S S+ R K E+ VL PEATI RP+ M G+
Sbjct: 174 HGGIMRYIQVSCLGAS-------VSSPSRMLRAKAAAEEAVLNALPEATIMRPATMIGTE 226
Query: 183 DKFLRYYGHMWRHVFRKLAVYK--KGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQA 239
D+ L + W +K G T QPVYV DVAAAIVAA KD ++ GK Y+
Sbjct: 227 DRIL----NPWSMFVKKYGFLPLIGGGTTKFQPVYVVDVAAAIVAALKDDGSSMGKTYEL 282
Query: 240 VGPKRYLLSELLDWFHVVMKK 260
GP + EL + + ++++
Sbjct: 283 GGPDVFTTHELAEIMYDMIRE 303
>sp|P25284|NDUA9_NEUCR NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-40 PE=1 SV=2
Length = 375
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 141/243 (58%), Gaps = 14/243 (5%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQ 67
+ GGRSS G ATVFGA+G +G Y+ N+L +QG ++IP+R Y+ R L++ GDLG+
Sbjct: 41 RNQGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVIPFRDE-YNKRHLKVTGDLGK 99
Query: 68 VLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVE 127
V+ + RN I +++++S+VV NLIGR++ TKNF+ D ++E R+A + V+
Sbjct: 100 VVMIEFDLRNTQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAEAVAKYDVD 159
Query: 128 KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLR 187
+FIH+S+ NADPN +F+ TK +GE+ V FPE TI RP+ M+G D+ L
Sbjct: 160 RFIHVSSYNADPN-------SECEFFATKARGEQVVRSIFPETTIVRPAPMFGFEDRLLH 212
Query: 188 YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247
+ K + G + PV+V DV A+ D + A + ++ GPK Y
Sbjct: 213 KLASV------KNILTSNGMQEKYNPVHVIDVGQALEQMLWDDNTASETFELYGPKTYTT 266
Query: 248 SEL 250
+E+
Sbjct: 267 AEI 269
>sp|Q559Z0|NDUA9_DICDI NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Dictyostelium discoideum GN=ndufa9 PE=3
SV=1
Length = 356
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 145/253 (57%), Gaps = 18/253 (7%)
Query: 1 MCRVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR 60
+ R+H G R+ G+VATVFGA+G+ G YL L + G Q+++PYR RDL+
Sbjct: 26 LTRIH----HGSRTQTTGLVATVFGATGFTGRYLVQLLARTGIQVVVPYRCEDEGFRDLK 81
Query: 61 LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARL 120
+ G+LGQ++ + R+ + I +AI +SN+VIN+ GR++ T+NF++ D NV +R+A L
Sbjct: 82 VLGELGQIIPVRFDIRDSESIERAISHSNIVINMAGRDYETRNFSLDDINVHAASRIADL 141
Query: 121 SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYG 180
SK VEK+IH+S L A + P S F R+K GEK P T+ RPS ++G
Sbjct: 142 SK--NVEKYIHVSTLRASEDSP-------SHFSRSKAIGEKLTREIIPNCTVVRPSIIFG 192
Query: 181 SGDKFLRYYGHMWRHVFRKLAVYKKGEETIK-QPVYVGDVAAAIVAACKDPDAAGKIYQA 239
DKF+ + W V + + + K QP++ D+A+ I++ + P +GK+Y+
Sbjct: 193 DEDKFI----NKWSKVSQNWPFIPRYNQQHKIQPLHCYDLASGILSILETPGTSGKVYEF 248
Query: 240 VGPKRYLLSELLD 252
G + + E LD
Sbjct: 249 AGDEVFTWDEFLD 261
>sp|Q0DWQ7|CCB12_ORYSJ Cyclin-B1-2 OS=Oryza sativa subsp. japonica GN=CYCB1-2 PE=3 SV=1
Length = 391
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 43/179 (24%)
Query: 76 RNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG-VEKFIHISA 134
++D E +A+K+ + + + D +V+I ++SKE G +FI +S
Sbjct: 226 KSDKENAEALKF---------KRLSQSRQQLIDWSVKI-----KVSKEHGGFMRFIQVSC 271
Query: 135 LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWR 194
L A + S+ R K GE+ VL+EFPE S G L ++ +
Sbjct: 272 LGAS--------ASSSRMLRAKAAGEESVLKEFPEPLRLLISHRQSMGTCILNFHSRI-- 321
Query: 195 HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA-GKIYQAVGPKRYLLSELLD 252
QPVYV DVAAAIV + KD + GK Y GP+ Y + +L +
Sbjct: 322 -----------------QPVYVVDVAAAIVNSLKDDGTSMGKSYGLGGPEIYTVHDLAE 363
>sp|Q9FVR6|Y1222_ARATH Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis
thaliana GN=At1g32220 PE=1 SV=1
Length = 296
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 92/227 (40%), Gaps = 32/227 (14%)
Query: 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRG---NFYDVRDLRLCGDLGQVLFQPYHPRND 78
V G +G++GS +C G +++ R NF D ++ G V + N
Sbjct: 66 VVLGGNGFVGSAICKAAISNGIEVVSVSRSGRPNFEDSWLDQVTWVTGDVFYL-----NW 120
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138
DE+ I G E K +ANV +K+ GV KF+ I+ D
Sbjct: 121 DEVLLGATAVVSTIGGFGNEEQMKRIN-GEANVT----AVNAAKDFGVPKFVLITV--HD 173
Query: 139 PNPPTYYISGGSQFYRTKYQGEKEVLREFPEA-TIFRPSDMYGS-------------GDK 184
N P + +S G ++ K E E+L ++P + + RP +YG G+
Sbjct: 174 YNLPPFILSNG--YFTGKRNAEAELLSKYPTSGVVLRPGFIYGKRKVNGIEVPLDLVGEP 231
Query: 185 FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD 231
+ Y R + R L + + PV V D+A A++ A KD D
Sbjct: 232 LDKIYDSAERFI-RPLRSLPASDLILAPPVNVDDLALAVINAVKDDD 277
>sp|P96871|RMLD_MYCTU dTDP-4-dehydrorhamnose reductase OS=Mycobacterium tuberculosis
GN=rmlD PE=1 SV=1
Length = 304
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 45/196 (22%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ GA G +GS+L + ++G ++ + +D+ D P + I
Sbjct: 10 ITGAGGQLGSHLTAQAAREGRDMLA-LTSSQWDITD----------------PAAAERI- 51
Query: 83 KAIKYSNVVINLIG---REFATKNFTIADA-NVEIPARLARLSKEMGVEKFIHISAL--- 135
I++ +VVIN + A N +A A N P LAR +G + IH+S
Sbjct: 52 --IRHGDVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGA-RLIHVSTDYVF 108
Query: 136 -----NADPNP--PTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMY--GSGDKFL 186
A+P P PT + + R+K GE+ VL FPEA + R + +Y G+G F+
Sbjct: 109 DGDFGGAEPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFV 168
Query: 187 RYYGHMWRHVFRKLAV 202
V R+LA
Sbjct: 169 --------AVMRRLAA 176
>sp|Q6BLA6|FMP52_DEBHA Protein FMP52, mitochondrial OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=FMP52 PE=3 SV=1
Length = 226
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 118 ARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR-EFPEATIFRPS 176
A+ +KE G+E F+ +S+L A+ + +Y+ ++K + E +++ EFP I RP
Sbjct: 97 AKAAKEAGIETFVLVSSLGANESSMLFYL-------KSKGKLENDIIALEFPRTIIIRPG 149
Query: 177 DMYGS-------GDKFLRYYGHMWRHVFRKLAVYK-KGEETIKQPVYVGD 218
+ G ++ + +G+M + K Y GEE K V++
Sbjct: 150 ALLGKRQKSQGIANEIFQKWGNMVKGTPFKFTAYPITGEEVAKVAVHLAS 199
>sp|Q331Q7|GERKI_STRSQ dTDP-4-dehydro-6-deoxyglucose reductase OS=Streptomyces sp.
GN=gerKI PE=1 SV=1
Length = 326
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 33/237 (13%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP 75
+ G V GA G++GS+ +L +G++++ YR +++ L +V
Sbjct: 6 WAGRTVLVTGALGFIGSHFVRQLDARGAEVLALYRTERPEIQAE--LAALNRVRLVRTEL 63
Query: 76 RNDDEIRKAIKYSNVVINLIGREFAT---------KNFTIADANVEIPARLARLSKEMGV 126
R++ ++R A KY I+ + A ++ I D+N + L ++ GV
Sbjct: 64 RDESDVRGAFKYLAPSIDTVVHCAAMDGNAQFKLERSAEILDSNQRTISNLLNCVRDFGV 123
Query: 127 EKFIHISALNADPNPPTYYISGGSQFYRT-KYQGEKEVL------------REFPEATIF 173
+ + +S+ PT F R+ +Y VL RE +F
Sbjct: 124 GEVVVMSSSELYSASPTVAAREEDDFRRSMRYTDNGYVLSKTYGEILARLHREQFGTNVF 183
Query: 174 --RPSDMYGSGDKFLRYYGHMWRHVFRK------LAVYKKGEETIKQPVYVGDVAAA 222
RP ++YG GD F G + + K + ++ G +T + V+V D+ A
Sbjct: 184 LVRPGNVYGPGDGFDCSRGRVIPSMLAKADAGEEIEIWGDGSQT-RSFVHVADLVRA 239
>sp|P75822|YBJT_ECOLI Uncharacterized protein YbjT OS=Escherichia coli (strain K12)
GN=ybjT PE=4 SV=2
Length = 476
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 22/224 (9%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
V GASGY+G +L L +QG QI+ R + R +L L V D +
Sbjct: 7 VLGASGYIGQHLVRTLSQQGHQILAAAR---HVDRLAKL--QLANVSCHKVDLSWPDNLP 61
Query: 83 KAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP 142
++ + V L+ +F + V + R A +E+ V++ I +S+L A P+
Sbjct: 62 ALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDAL--REVPVKQLIFLSSLQAPPHEQ 119
Query: 143 TYYISGGSQFYRTKYQGEKEVLREFP-EATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA 201
+ ++ Q ++LRE T R + G+G R + L
Sbjct: 120 SDHLRA--------RQATADILREANVPVTELRAGIIVGAGSAAFEVM----RDMVYNLP 167
Query: 202 VYK--KGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243
V + + P+ + ++ +VA P + +I++A GP+
Sbjct: 168 VLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPE 211
>sp|P75821|YBJS_ECOLI Uncharacterized protein YbjS OS=Escherichia coli (strain K12)
GN=ybjS PE=4 SV=2
Length = 337
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 33/174 (18%)
Query: 109 ANVEIPARLARLSKEMGVEKFIHISA------------LNADPNPPTYYISGGSQFYRTK 156
ANV RL + GV FIHIS+ + D P + ++F R+K
Sbjct: 89 ANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRF----ANEFARSK 144
Query: 157 YQGEKEVLREFPEA------TIFRPSDMYGSGDK-FLRYYGHMWRHVFRKLAVYKKGEET 209
E EV+ +A TI RP ++G DK F+ HM H + + + G
Sbjct: 145 AASE-EVINMLSQANPQTRFTILRPQSLFGPHDKVFIPRLAHMMHH-YGSILLPHGGSAL 202
Query: 210 IKQPVYVGDVAAAIVA---ACKDPDAAGKIYQAVGPK----RYLLSELLDWFHV 256
+ Y V A +A AC D +G++Y + R ++ +L+D ++
Sbjct: 203 VDMTYYENAVHAMWLASQEAC-DKLPSGRVYNITNGEHRTLRSIVQKLIDELNI 255
>sp|Q9FX01|HSDD1_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1
OS=Arabidopsis thaliana GN=3BETAHSD/D1 PE=2 SV=1
Length = 439
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 23/140 (16%)
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIA-DANVEIPARLARLSKEM 124
G+V + RN ++ K + + VV ++ + + N + NV+ + E+
Sbjct: 64 GRVQYVSADLRNKTQVVKGFQGAEVVFHMAAPDSSINNHQLQYSVNVQGTTNVIDACIEV 123
Query: 125 GVEKFIHISA-----------LNAD---PNPPTYYISGGSQFYRTKYQGEKEVLREFPEA 170
GV++ I+ S+ LNAD P PP + + TK +GE +L+ +
Sbjct: 124 GVKRLIYTSSPSVVFDGVHGTLNADESLPYPPKH----NDSYSATKAEGEALILKANGRS 179
Query: 171 TIF----RPSDMYGSGDKFL 186
+ RPS ++G GDK +
Sbjct: 180 GLLTCCIRPSSIFGPGDKLM 199
>sp|Q9N119|3BHS_PIG 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Sus
scrofa GN=HSD3B PE=2 SV=4
Length = 373
Score = 38.1 bits (87), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 67/167 (40%), Gaps = 32/167 (19%)
Query: 91 VINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN-ADPNPPTYYISGG 149
V+N +GRE T+ NV+ L + V FIH S++ A PN I
Sbjct: 88 VVNAVGRE------TVMKVNVKGTQLLLEACVQASVPVFIHTSSIEVAGPNSYREVIQNA 141
Query: 150 SQFYR-----------TKYQGEKEVLREFPEA---------TIFRPSDMYGSGDKFLRYY 189
+ R +K EK VL A RP +YG G F+ +
Sbjct: 142 CEEDRLETAWSAPYPLSKKLAEKAVLEANGWALQNGGTLHTCALRPMYIYGEGSPFI--F 199
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVA-AAIVA--ACKDPDAA 233
HM + + + + + PVYVG+VA A I+A A +DP A
Sbjct: 200 AHMNKALENNGVLTHNSKFSRVNPVYVGNVAWAHILALRALRDPRKA 246
>sp|Q07DZ6|CFTR_ORNAN Cystic fibrosis transmembrane conductance regulator
OS=Ornithorhynchus anatinus GN=CFTR PE=3 SV=1
Length = 1484
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 193 WRHVFRKLAVYKKGEETIKQ--PVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSEL 250
W R + ++KK + +++ +VAA++V C D A ++ +
Sbjct: 847 WNTYLRYMTIHKKLIFVLMMCLVIFLIEVAASLVGLCLFKDGASRMNSTSNLNH---TST 903
Query: 251 LDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLFPGYPMGH 295
LDWF V++ Y +Y Y D ++ L G G P+ H
Sbjct: 904 LDWFAVIVTNTSTYYMFYIYVGVADTLLAL-----GFLRGLPLVH 943
>sp|A0QTF8|RMLD_MYCS2 dTDP-4-dehydrorhamnose reductase OS=Mycobacterium smegmatis (strain
ATCC 700084 / mc(2)155) GN=rmlD PE=1 SV=1
Length = 327
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 81/217 (37%), Gaps = 42/217 (19%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82
+ GA G +G L ++ +G ++ + D+ D +D +R
Sbjct: 38 ITGAGGMVGRVLADQAAAKG-HTVLALTSSQCDITD-------------------EDAVR 77
Query: 83 KAIKYSNVVINLIGREFATKNFTIAD----ANVEIPARLARLSKEMGVEKFIHIS----- 133
+ + +VVIN K + N P LA+ + IHIS
Sbjct: 78 RFVANGDVVINCAAYTQVDKAEDEPERAHAVNAVGPGNLAKACAAVDA-GLIHISTDYVF 136
Query: 134 -ALNADPNPPTYYISGGSQFY-RTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGH 191
A++ D +G Y RTK GE+ VL P+A + R + +Y GD G
Sbjct: 137 GAVDRDTPYEVDDETGPVNIYGRTKLAGEQAVLAAKPDAYVVRTAWVYRGGD------GS 190
Query: 192 MWRHVFRKLAVYKKG----EETIKQPVYVGDVAAAIV 224
+ R+LA + + P Y GD+ A++
Sbjct: 191 DFVATMRRLAAGDGAIDVVADQVGSPTYTGDLVGALL 227
>sp|Q03YZ8|TYSY_LEUMM Thymidylate synthase OS=Leuconostoc mesenteroides subsp.
mesenteroides (strain ATCC 8293 / NCDO 523) GN=thyA PE=3
SV=1
Length = 322
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136
NDDE ++ Y V + R + T + T D V+ ARL KE + + ++A N
Sbjct: 133 NDDEFKEEFGYIGNVYGKLWRSWETNSLTAGDETVDQVARLIDQIKETPNSRRLILTAWN 192
Query: 137 ADPNP----PTYYISGGSQFY 153
A+ P P+ ++ SQFY
Sbjct: 193 AETTPQAPLPSCHVL--SQFY 211
>sp|P14060|3BHS1_HUMAN 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1
OS=Homo sapiens GN=HSD3B1 PE=1 SV=2
Length = 373
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 99/255 (38%), Gaps = 40/255 (15%)
Query: 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIII---------PYRGNFYDVRD-LRLCGDL 65
G V GA G++G + L K+ I R F +++ +L
Sbjct: 1 MTGWSCLVTGAGGFLGQRIIRLLVKEKELKEIRVLDKAFGPELREEFSKLQNKTKLTVLE 60
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
G +L +P+ R ++ I ++ +I++ G T +I + NV+ L +
Sbjct: 61 GDILDEPFLKRACQDV-SVIIHTACIIDVFG---VTHRESIMNVNVKGTQLLLEACVQAS 116
Query: 126 VEKFIHISALN-ADPNPPTYYISGGSQ-----------FYRTKYQGEKEVLRE------- 166
V FI+ S++ A PN I G + + +K EK VL
Sbjct: 117 VPVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKN 176
Query: 167 --FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA-I 223
RP +YG G +FL + + + G+ + PVYVG+VA A I
Sbjct: 177 GGTLYTCALRPMYIYGEGSRFLS--ASINEALNNNGILSSVGKFSTVNPVYVGNVAWAHI 234
Query: 224 VA--ACKDPDAAGKI 236
+A A +DP A I
Sbjct: 235 LALRALQDPKKAPSI 249
>sp|Q5HLD8|Y2049_STAEQ Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP2049 PE=3
SV=1
Length = 230
Score = 35.0 bits (79), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 22/105 (20%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH----- 74
VA V GAS +G + KL +QG+ I++ R + RL ++ Q L P
Sbjct: 8 VAVVTGASSGIGEAIAKKLSQQGASIVLVGR------NEQRL-NEIAQQLNTPAKVVSAD 60
Query: 75 ---PRNDDEIRKAI----KYSNVVINLIGREFATKNFTIADANVE 112
N D++ KA+ + ++V+N G+ ++K I D NVE
Sbjct: 61 VTVKSNIDDMLKAVIDHFGHIDIVVNSAGQSLSSK---ITDYNVE 102
>sp|Q8CN40|Y2036_STAES Uncharacterized oxidoreductase SE_2036 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_2036 PE=3 SV=1
Length = 230
Score = 35.0 bits (79), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 22/105 (20%)
Query: 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYH----- 74
VA V GAS +G + KL +QG+ I++ R + RL ++ Q L P
Sbjct: 8 VAVVTGASSGIGEAIAKKLSQQGASIVLVGR------NEQRL-NEIAQQLNTPAKVVSAD 60
Query: 75 ---PRNDDEIRKAI----KYSNVVINLIGREFATKNFTIADANVE 112
N D++ KA+ + ++V+N G+ ++K I D NVE
Sbjct: 61 VTVKSNIDDMLKAVIDHFGHIDIVVNSAGQSLSSK---ITDYNVE 102
>sp|P38797|PP2C7_YEAST Protein phosphatase 2C homolog 7, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PTC7 PE=1
SV=2
Length = 343
Score = 35.0 bits (79), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGV--EKFI-H 131
PR+ DE +K +++I + + T N D + + AR + E+ + +KF+ +
Sbjct: 244 PRDADEYSFQLKKKDIII--LATDGVTDNIATDDIELFLKDNAARTNDELQLLSQKFVDN 301
Query: 132 ISALNADPNPPTYYISGGSQFYRTKYQGEKE 162
+ +L+ DPN P+ + S+ Y G KE
Sbjct: 302 VVSLSKDPNYPSVFAQEISKLTGKNYSGGKE 332
>sp|Q5BJJ6|MAT2B_DANRE Methionine adenosyltransferase 2 subunit beta OS=Danio rerio
GN=mat2b PE=2 SV=1
Length = 323
Score = 35.0 bits (79), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 24/124 (19%)
Query: 77 NDDEIRKAIK--YSNVVINLIG--REFATKNFTIADANVEIPARLARLSKEMGVEKFIHI 132
++D +R I+ +V+++ R + T A N+ + A A L+KE G I+I
Sbjct: 63 DEDAVRGVIQSFQPHVIVHCAAERRPDVVERHTEAAMNLNVHA-CATLAKEAGGSFLIYI 121
Query: 133 SA------------LNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYG 180
S N PNP Y ++K +GE+E+LR P A + R ++G
Sbjct: 122 STDYVFDGRNPPYGENDAPNPLNLY-------GKSKLEGEREILRHCPGAAVLRVPILFG 174
Query: 181 SGDK 184
+K
Sbjct: 175 EVEK 178
>sp|P26670|3BHS_VACCW 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase
OS=Vaccinia virus (strain Western Reserve) GN=VACWR170
PE=3 SV=1
Length = 346
Score = 34.7 bits (78), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 32/177 (18%)
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFT---IADANVEIPARLARLSKEMGVEKFIHISAL 135
D++R+A+ N++I+ +T I N + ++G++ I+ S++
Sbjct: 60 DKVREALDGVNLIIHTAALVDVFGKYTDNEIMKVNYYGTQTILAACVDLGIKYLIYTSSM 119
Query: 136 NA-------DP----NPPTYYISGGSQFYRTKYQGEKEVLREFPEATI---------FRP 175
A DP Y IS G + ++K E+ V++ + RP
Sbjct: 120 EAIGPNKHGDPFIGHEHTLYDISPGHVYAKSKRMAEQLVMKANNSVIMNGAKLYTCCLRP 179
Query: 176 SDMYGSGDKFLR-YYGHMWRH---VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228
+ +YG GDK + +Y +H ++R + ++ + VYVG+VA V A K
Sbjct: 180 TGIYGEGDKLTKVFYEQCKQHGNIMYRTV-----DDDAVHSRVYVGNVAWMHVLAAK 231
>sp|P39858|CAPI_STAAU Protein CapI OS=Staphylococcus aureus GN=capI PE=3 SV=1
Length = 334
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 30/246 (12%)
Query: 23 VFGASGYMGSYLCNKLGKQGSQII-IPYRGNFYDV--RDLRLCGDLGQ--VLFQPYHPRN 77
+ G +G++GS+L KL KQG +I + ++Y V ++ RL +G+ F N
Sbjct: 5 ITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKS-IGKENFTFNKVKLEN 63
Query: 78 DDEIRKAI--KYSNVVINL---IGREFATKN-FTIADANVEIPARLARLSKEMGVEKFIH 131
D++ K + VV+NL G ++ +N T D+N+ + S+ ++ I+
Sbjct: 64 YDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQNLIY 123
Query: 132 ISALN---ADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRY 188
S+ + A+ + P + S + Y K+ E T ++ +G +F
Sbjct: 124 ASSSSVYGANTSKP-FSTSDNIDHPLSLYAATKKS-NELMAHTYSHLYNLPTTGLRFFTV 181
Query: 189 YG-----HMWRHVFRK-------LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI 236
YG M F K + VY G ++ YV D+ AI K P + K
Sbjct: 182 YGPWGRPDMALFKFTKAIVNDQAIDVYNHG-NMMRDFTYVDDIVEAISRLVKKPASPNKE 240
Query: 237 YQAVGP 242
+ P
Sbjct: 241 WSGADP 246
>sp|O57245|3BHS_VACCA 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase
OS=Vaccinia virus (strain Ankara) GN=MVA157L PE=3 SV=1
Length = 346
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 32/177 (18%)
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFT---IADANVEIPARLARLSKEMGVEKFIHISAL 135
D++R+A+ N++I+ +T I N + ++G++ I+ S++
Sbjct: 60 DKVREALDGVNLIIHTAALVDVFGKYTDNEIMKVNYYGTQTILAACVDLGIKYLIYTSSM 119
Query: 136 NA-------DP----NPPTYYISGGSQFYRTKYQGEKEVLREFPEATI---------FRP 175
A DP Y IS G + ++K E+ V++ + RP
Sbjct: 120 EAIGPNKHGDPFIGHEHTLYDISPGHVYAKSKRMAEQLVMKANNSVIMNGAKLYTCCLRP 179
Query: 176 SDMYGSGDKFLR-YYGHMWRH---VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228
+ +YG GDK ++ +Y +H ++R + + + VYVG+ A V A K
Sbjct: 180 TGIYGEGDKLMKVFYEQCKQHGNIMYRTV-----DDNAVHSRVYVGNAAWMHVLAAK 231
>sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2
Length = 564
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 115/301 (38%), Gaps = 47/301 (15%)
Query: 34 LCNKLGKQGSQIII-PYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI 92
C ++ I++ P GN LR G+V + R+ ++ KA + + VV
Sbjct: 35 FCVRIADLAPAIMLDPQEGNGVLDEGLRS----GRVQYISADLRDKSQVVKAFQGAEVVF 90
Query: 93 NLIGREFATKNFTIA-DANVEIPARLARLSKEMGVEKFIHISA-----------LNADPN 140
++ + + N + NV+ + ++GV++ I+ S+ LN +
Sbjct: 91 HMAAPDSSINNHQLQYSVNVQGTQNVIDACVDVGVKRLIYTSSPSVVFDGVHGILNGTES 150
Query: 141 PPTYYISGGSQFYRTKYQGEKEVL----REFPEATIFRPSDMYGSGDKFLRYYGHMWRHV 196
Y I + TK +GE+ ++ R RPS ++G GD+ L V
Sbjct: 151 M-AYPIKHNDSYSATKAEGEELIMKANGRNGLLTCCIRPSSIFGPGDRLL---------V 200
Query: 197 FRKLAVYKKGEE--------TIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248
+A + G+ + YV +VA A V A + + G + + Y ++
Sbjct: 201 PSLVAAARAGKSKFIIGDGNNLYDFTYVENVAHAHVCAERALASGGDVSTKAAGQAYFIT 260
Query: 249 ELLDW-FHVVMKKGEPDYGYYRYDLRYDP--VMPLKLFINGLFP-----GYPMGHLTPER 300
+ F M + GY R ++ +MP+ + + G + LTP R
Sbjct: 261 NMEPIKFWEFMSQLLDGLGYERPSIKIPAFIMMPIAHLVELTYKVLGPYGMTVPQLTPSR 320
Query: 301 V 301
V
Sbjct: 321 V 321
>sp|P14893|3BHS_BOVIN 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Bos
taurus GN=HSD3B PE=1 SV=2
Length = 373
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 74/192 (38%), Gaps = 33/192 (17%)
Query: 77 NDDEIRKAIKYSNVVI---NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133
++ ++ A + ++VVI ++I A TI + NV+ L + V FIH S
Sbjct: 65 DEQCLKGACQGTSVVIHTASVIDVRNAVPRETIMNVNVKGTQLLLEACVQASVPVFIHTS 124
Query: 134 ALN-ADPNPPTYYISGG-----------SQFYRTKYQGEKEVLREFPEA---------TI 172
+ A PN I G S + +K EK VL A
Sbjct: 125 TIEVAGPNSYREIIQDGREEEHHESAWSSPYPYSKKLAEKAVLGANGWALKNGGTLYTCA 184
Query: 173 FRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC----- 227
RP +YG G FL Y H + L + K PVYVG+VA A + A
Sbjct: 185 LRPMYIYGEGSPFLSAYMHGALNNNGILTNHCKFSRV--NPVYVGNVAWAHILALRALRD 242
Query: 228 --KDPDAAGKIY 237
K P+ G+ Y
Sbjct: 243 PKKVPNIQGQFY 254
>sp|A6Q6K6|PURT_SULNB Phosphoribosylglycinamide formyltransferase 2 OS=Sulfurovum sp.
(strain NBC37-1) GN=purT PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 89/232 (38%), Gaps = 46/232 (19%)
Query: 8 KGTGGRSSFNGVVATVFGASGYMGSY------------LCNKLGKQGSQIIIPYRGNF-Y 54
K G R F V+ V +SG+ S + + S++I+ F Y
Sbjct: 141 KAAGERIGFPCVIKPVMSSSGHGQSIAKTANDIERSWEIAKEARGDASELIVEEFVPFDY 200
Query: 55 DVRDLRLCGDLGQVLFQPY-HPRND--------------DEIRKAIKYSNVVIN-LIGRE 98
++ L + + G +P H + D + ++KA + + V + L GR
Sbjct: 201 EITLLTVRNETGTTFCEPIGHVQKDGDFILSWQPMQMSPEALKKAQEIAKAVTDGLGGRG 260
Query: 99 FATKNFTIADANV---EIPAR-----LARLSKEMGVEKFIHISALNADPNPPTYYISGGS 150
F + D V E+ R + L + E +H+ A+ P T+Y +G
Sbjct: 261 IFGVEFFVKDEEVYFSELSPRPHDTGMVTLITQSQSEFALHVRAVLGLPLDFTFYGAGAC 320
Query: 151 QFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV 202
Y+ K + VL P D + + D F+R +G HV R++AV
Sbjct: 321 GAYKAKNESHNPVLE--------IPDDAF-TKDSFVRVFGKPESHVGRRMAV 363
>sp|Q04304|YMY0_YEAST UPF0659 protein YMR090W OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YMR090W PE=1 SV=1
Length = 227
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 116 RLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRP 175
++ ++ G+++F+ +SAL A+ Y I G ++Y K ++EV + TI +P
Sbjct: 100 KVVEACEKAGIKRFVVVSALKAEDRDFWYNIKGLREYYIAKRSADREVRNSNLDYTILQP 159
Query: 176 SDM 178
+
Sbjct: 160 GSL 162
>sp|P26439|3BHS2_HUMAN 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2
OS=Homo sapiens GN=HSD3B2 PE=1 SV=2
Length = 372
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 30/195 (15%)
Query: 66 GQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMG 125
G +L +P+ R ++ I ++ +I++ G T +I + NV+ L +
Sbjct: 60 GDILDEPFLKRACQDVSVVI-HTACIIDVFG---VTHRESIMNVNVKGTQLLLEACVQAS 115
Query: 126 VEKFIHISALN-ADPNPPTYYISGGSQ-----------FYRTKYQGEKEVLR-------- 165
V FI+ S++ A PN I G + + +K EK VL
Sbjct: 116 VPVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKN 175
Query: 166 -EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA-I 223
+ RP+ +YG G FL + + + G+ + PVYVG+VA A I
Sbjct: 176 GDTLYTCALRPTYIYGEGGPFLS--ASINEALNNNGILSSVGKFSTVNPVYVGNVAWAHI 233
Query: 224 VA--ACKDPDAAGKI 236
+A A +DP A +
Sbjct: 234 LALRALRDPKKAPSV 248
>sp|Q5IFP1|3BHS_CANFA 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Canis
familiaris GN=HSD3B PE=2 SV=3
Length = 373
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 32/170 (18%)
Query: 91 VINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN-ADPNPPTYYISGG 149
V+N+I RE TI + N++ L + V FI+ S + A PN I
Sbjct: 88 VMNVIHRE------TIMNVNLKGTQLLLEACAQASVPIFIYTSTIEVAGPNSYRDIIQNA 141
Query: 150 SQ-----------FYRTKYQGEKEVLREFPEA---------TIFRPSDMYGSGDKFLRYY 189
+ + +K EK VL A RP +YG G FL Y
Sbjct: 142 HEEEHLESTWSAPYPYSKKLAEKAVLAANGWALKNGGTLHTCALRPMYIYGEGSIFL--Y 199
Query: 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVA-AAIVA--ACKDPDAAGKI 236
++++ + + + +I PVYVG+VA A I+A A +DP A +
Sbjct: 200 NYIYKALRNNGILTHHSKFSIVNPVYVGNVAWAHILALRALQDPKKAPSV 249
>sp|Q8XV87|HIS2_RALSO Phosphoribosyl-ATP pyrophosphatase OS=Ralstonia solanacearum
(strain GMI1000) GN=hisE PE=3 SV=1
Length = 124
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258
++ KG++ I + + G+ A V A KD AAG +A G Y +++L WFH ++
Sbjct: 31 LFHKGDDAILKKI--GEEATETVMAAKDARAAGMTDEARGKVVYEVADL--WFHTMV 83
>sp|Q0I260|DAPA_HAES1 4-hydroxy-tetrahydrodipicolinate synthase OS=Haemophilus somnus
(strain 129Pt) GN=dapA PE=3 SV=1
Length = 298
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 27/141 (19%)
Query: 3 RVHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPY------RGNFYDV 56
R+ + GTG ++ + T L N G G ++PY G +
Sbjct: 76 RIPIIAGTGANATSEAITMT----------KLLNDSGVAGCLSVVPYYNKPTQEGMYQHF 125
Query: 57 RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPAR 116
+ + C D+ Q+L+ D + + + + + N++G + AT + + R
Sbjct: 126 KAIAECTDIPQILYNVPSRTGSDLLPETVGRLSQIANIVGIKEATGDVS----------R 175
Query: 117 LARLSKEMGVEKFIHISALNA 137
+A++ K+M E FI +S +A
Sbjct: 176 VAKI-KQMAGEDFIFLSGDDA 195
>sp|P21097|3BHS_VACCC 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase
OS=Vaccinia virus (strain Copenhagen) GN=A44L PE=3 SV=1
Length = 346
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 32/177 (18%)
Query: 79 DEIRKAIKYSNVVINLIGREFATKNFT---IADANVEIPARLARLSKEMGVEKFIHISAL 135
D++R+A+ N++I+ +T I N + ++G++ I+ S++
Sbjct: 60 DKVREALDGVNLIIHTAALVDVFGKYTDNEIMKVNYYGTQTILAACVDLGIKYLIYTSSM 119
Query: 136 NA-------DP----NPPTYYISGGSQFYRTKYQGEKEVLREFPEATI---------FRP 175
A DP Y IS G + ++K E+ V++ + RP
Sbjct: 120 EAIGPNKHGDPFIGHEHTLYDISPGHVYAKSKRMAEQLVMKANNSVIMNGAKLYTCCLRP 179
Query: 176 SDMYGSGDKFLR-YYGHMWRH---VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228
+ +YG GDK + +Y +H ++R + + + VYVG+ A V A K
Sbjct: 180 TGIYGEGDKLTKVFYEQCKQHGNIMYRTV-----DDNAVHSRVYVGNAAWMHVLAAK 231
>sp|Q1E7Y1|FMP52_COCIM Protein FMP52, mitochondrial OS=Coccidioides immitis (strain RS)
GN=FMP52 PE=3 SV=1
Length = 246
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Query: 108 DANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR-E 166
DANV+ LAR +KE G + ++ +S+ ADP+ Y+ + K EK +L
Sbjct: 103 DANVD----LARAAKEAGTKVYVLVSSAGADPSSKLPYM-------KLKGDIEKSILDLN 151
Query: 167 FPEATIFRPSDMYG 180
F + I RP + G
Sbjct: 152 FEKTIILRPGFLSG 165
>sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4
Length = 1630
Score = 31.6 bits (70), Expect = 6.7, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 108 DANVEIPARL-ARLSKEMGVEKFIHISALN---ADPNPPTYYISGGSQFYRTKYQGEKEV 163
D+ +PA RLS E G+ + SA A+P P+ GGSQ T GE++
Sbjct: 501 DSGSPLPAEEEKRLSAESGLSEDSRPSASTVSEAEPEGPSAEAQGGSQQEATTAGGEEDA 560
Query: 164 LREFPEATIFRPSDMYGSGD 183
++ E T+ D GD
Sbjct: 561 EEDYQEPTVHFAEDALLPGD 580
>sp|Q8N4C6|NIN_HUMAN Ninein OS=Homo sapiens GN=NIN PE=1 SV=4
Length = 2090
Score = 31.6 bits (70), Expect = 7.5, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 134 ALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSD 177
+L A P Y+ GG ++ R +E + EFPE T+ P D
Sbjct: 91 SLEAQPK----YVRGGKRYGRRSLPEFQESVEEFPEVTVIEPLD 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.142 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,897,812
Number of Sequences: 539616
Number of extensions: 5608539
Number of successful extensions: 11188
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 11143
Number of HSP's gapped (non-prelim): 52
length of query: 303
length of database: 191,569,459
effective HSP length: 117
effective length of query: 186
effective length of database: 128,434,387
effective search space: 23888795982
effective search space used: 23888795982
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)